BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048616
(272 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255548349|ref|XP_002515231.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545711|gb|EEF47215.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 505
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 219/271 (80%), Positives = 243/271 (89%), Gaps = 1/271 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MRE+G+KPD+VSYN LIDVYCKDR++EKAYK+VEKMR+EDISPDVI+YTSIIGGLGLVGQ
Sbjct: 233 MRELGIKPDVVSYNSLIDVYCKDREMEKAYKVVEKMREEDISPDVITYTSIIGGLGLVGQ 292
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
PDKARD+L EMKEYGCYPD AAYNA IRNYCIAKRL DAS LMDEM KGLSPNATTYNL
Sbjct: 293 PDKARDILNEMKEYGCYPDVAAYNAVIRNYCIAKRLGDASNLMDEMASKGLSPNATTYNL 352
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
FFRVFYWSNDLR+SW+LY RMM +GCLPNTQSCMFL++L ++ EKVE+AL LWNDMVEKG
Sbjct: 353 FFRVFYWSNDLRNSWSLYRRMMESGCLPNTQSCMFLIRLFRKHEKVEMALTLWNDMVEKG 412
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
FGSYILVSDVLFDLLCDMGKLVEAEK FL+MIEKGHKPS VSFRRIK LMEL NK +AL
Sbjct: 413 FGSYILVSDVLFDLLCDMGKLVEAEKCFLQMIEKGHKPSNVSFRRIKVLMELVNKHDALL 472
Query: 241 NLSNKMALFGPSM-IPKREEYLAEMSASDSF 270
NL KMA+FG S+ +P+REE+L E S DS
Sbjct: 473 NLQKKMAIFGSSIQLPEREEHLNETSYIDSL 503
>gi|225437663|ref|XP_002279193.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420-like [Vitis vinifera]
Length = 526
Score = 455 bits (1171), Expect = e-126, Method: Compositional matrix adjust.
Identities = 217/273 (79%), Positives = 239/273 (87%), Gaps = 1/273 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MREMGV+PD+VSYNCLIDVYCK R++E+AYK+++KMRDE ISPDVISYTSIIGGLGLVGQ
Sbjct: 254 MREMGVEPDVVSYNCLIDVYCKGREIERAYKVIDKMRDEQISPDVISYTSIIGGLGLVGQ 313
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
PDKARDVLKEMKEYGCYPD AAYNAAIRN+CIA RL DA GLMDEMV KGLSPNATTYNL
Sbjct: 314 PDKARDVLKEMKEYGCYPDVAAYNAAIRNFCIANRLGDADGLMDEMVGKGLSPNATTYNL 373
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
FFR FYWSNDL S LY RM TGCLPNTQSCMFL +L +RQEKVE+AL+LWNDMVEKG
Sbjct: 374 FFRCFYWSNDLGRSCGLYQRMKKTGCLPNTQSCMFLTRLFRRQEKVEMALELWNDMVEKG 433
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
FGSYILVSDVLFD+LCDMGKLVE EK L+MIEKGHKPS VSFRRIK LMELANK EALQ
Sbjct: 434 FGSYILVSDVLFDMLCDMGKLVEVEKCCLQMIEKGHKPSNVSFRRIKVLMELANKHEALQ 493
Query: 241 NLSNKMALFGPSM-IPKREEYLAEMSASDSFSC 272
NL+ KMA+FGPS + +R E + E+S +S C
Sbjct: 494 NLTEKMAMFGPSTQVQERAENMVEISDLESLPC 526
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/246 (19%), Positives = 97/246 (39%), Gaps = 36/246 (14%)
Query: 12 SYNCLIDVYCKDRQVEKAYKIVEKMRDED---ISPDVISYTSIIGGLGLVGQPDKARDVL 68
S + ++ + + R+ ++ ++++ MR +D ISP S ++G + V + +
Sbjct: 128 SLDTMLYILGRSRRFDQIWELLVDMRRKDQSLISPR--SVQVVLGRIAKVCSVKQTVESF 185
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRD------------------------------ 98
++ K+ D A +NA +R C K +RD
Sbjct: 186 RKFKKLVPEFDTACFNALLRTLCQEKSMRDARNVYHSLKHDFRPDLRTFNILLSGWKSAE 245
Query: 99 -ASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV 157
A G DEM E G+ P+ +YN V+ ++ ++ + +M P+ S ++
Sbjct: 246 EAEGFFDEMREMGVEPDVVSYNCLIDVYCKGREIERAYKVIDKMRDEQISPDVISYTSII 305
Query: 158 KLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHK 217
+ + A + +M E G + + C +L +A+ EM+ KG
Sbjct: 306 GGLGLVGQPDKARDVLKEMKEYGCYPDVAAYNAAIRNFCIANRLGDADGLMDEMVGKGLS 365
Query: 218 PSQVSF 223
P+ ++
Sbjct: 366 PNATTY 371
>gi|356499705|ref|XP_003518677.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420-like [Glycine max]
Length = 500
Score = 436 bits (1120), Expect = e-120, Method: Compositional matrix adjust.
Identities = 204/268 (76%), Positives = 233/268 (86%), Gaps = 1/268 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+EMGV PD+V+YN L+DVYCK R++EKAYK++++MRD+D SPDVI+YT IIGGLGL+GQ
Sbjct: 228 MKEMGVTPDVVTYNSLMDVYCKGREIEKAYKMLDEMRDQDFSPDVITYTCIIGGLGLIGQ 287
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
PDKAR+VLKEMKEYGCYPDAAAYNAAIRN+CIAKRL DA GL++EMV KGLSPNATTYNL
Sbjct: 288 PDKARNVLKEMKEYGCYPDAAAYNAAIRNFCIAKRLGDAHGLVEEMVTKGLSPNATTYNL 347
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
FFRVFYWSNDL+SSWN+Y RMM GCLPNTQSCMFL++L +R EKVE+ALQ W DMVEKG
Sbjct: 348 FFRVFYWSNDLQSSWNMYQRMMVEGCLPNTQSCMFLIRLFRRHEKVEMALQFWGDMVEKG 407
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
FGSY LVSDVLFDLLCDMGKL EAEK FLEM+EKG KPS VSFRRIK LMELAN+ EALQ
Sbjct: 408 FGSYTLVSDVLFDLLCDMGKLEEAEKCFLEMVEKGQKPSHVSFRRIKVLMELANRHEALQ 467
Query: 241 NLSNKMALFG-PSMIPKREEYLAEMSAS 267
+L KMA+FG P + + AE S S
Sbjct: 468 SLMQKMAMFGRPLQVDQSTVNPAETSDS 495
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 93/222 (41%), Gaps = 4/222 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
R++ + D +N L+ C+++ + A + ++ P++ ++ ++ G
Sbjct: 162 FRKLVQEFDTNCFNALLRTLCQEKSMADARNVYHSLKHR-FRPNLQTFNILLSGWK---T 217
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
P+ A KEMKE G PD YN+ + YC + + A ++DEM ++ SP+ TY
Sbjct: 218 PEDADLFFKEMKEMGVTPDVVTYNSLMDVYCKGREIEKAYKMLDEMRDQDFSPDVITYTC 277
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ N+ M GC P+ + ++ +++ A L +MV KG
Sbjct: 278 IIGGLGLIGQPDKARNVLKEMKEYGCYPDAAAYNAAIRNFCIAKRLGDAHGLVEEMVTKG 337
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
++ F + L + + M+ +G P+ S
Sbjct: 338 LSPNATTYNLFFRVFYWSNDLQSSWNMYQRMMVEGCLPNTQS 379
>gi|357442157|ref|XP_003591356.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480404|gb|AES61607.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 518
Score = 429 bits (1104), Expect = e-118, Method: Compositional matrix adjust.
Identities = 199/258 (77%), Positives = 230/258 (89%), Gaps = 1/258 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+EMGV+PD+V+YN L+DVYCK R++EKAYK+ ++MR++D+SPDVI+YTS+IGGLGLVGQ
Sbjct: 222 MKEMGVEPDVVTYNSLVDVYCKGREIEKAYKVFDEMREKDLSPDVITYTSVIGGLGLVGQ 281
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
PDKARDVLKEMKEYG YPD AYNAAIRNYCIAKRL A L+DEMV KGLSPNATTYNL
Sbjct: 282 PDKARDVLKEMKEYGVYPDVPAYNAAIRNYCIAKRLGIAFELVDEMVNKGLSPNATTYNL 341
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
FFRVFYWSNDL+SSWNLY RMMG GCLP TQSCMFL++L KR EK+E+ALQLW +MVEKG
Sbjct: 342 FFRVFYWSNDLQSSWNLYKRMMGEGCLPYTQSCMFLIRLFKRHEKMEMALQLWGEMVEKG 401
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
FGSY LVSDVLFD+LCDMGKL+EAEK FLEMIEKG +PS VSF+RIK LMELANK EA+Q
Sbjct: 402 FGSYTLVSDVLFDMLCDMGKLMEAEKCFLEMIEKGQRPSNVSFKRIKVLMELANKHEAIQ 461
Query: 241 NLSNKMALFG-PSMIPKR 257
NL+ KMA+FG P + +R
Sbjct: 462 NLTQKMAIFGRPLQVHER 479
>gi|224093900|ref|XP_002310039.1| predicted protein [Populus trichocarpa]
gi|222852942|gb|EEE90489.1| predicted protein [Populus trichocarpa]
Length = 507
Score = 426 bits (1095), Expect = e-117, Method: Compositional matrix adjust.
Identities = 198/253 (78%), Positives = 224/253 (88%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E+GVKPDIV+YN LIDV+CK R++EKAY +V +MR+EDI PDVI+YTSIIGGLGLVGQ
Sbjct: 237 MKELGVKPDIVTYNSLIDVFCKGRELEKAYGVVARMREEDILPDVITYTSIIGGLGLVGQ 296
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
PDKARD+LKEMKE+GCYPD AAYNA IRNYCIAKRL A LM EM KG+SPNAT+YNL
Sbjct: 297 PDKARDMLKEMKEHGCYPDVAAYNAVIRNYCIAKRLDAAYSLMAEMESKGMSPNATSYNL 356
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
FFRVF WSNDLR+SW+ Y RMM GCLPNTQSCMFL+KL KR EKVE+ALQLWNDMVEKG
Sbjct: 357 FFRVFSWSNDLRNSWDFYGRMMDAGCLPNTQSCMFLIKLFKRHEKVEMALQLWNDMVEKG 416
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
FGSYILVSDVL +LCDMGKLVEAEK FL+M+EKGHKPS VSFRRIK LMELANK +A++
Sbjct: 417 FGSYILVSDVLLGMLCDMGKLVEAEKCFLQMVEKGHKPSNVSFRRIKVLMELANKHDAIR 476
Query: 241 NLSNKMALFGPSM 253
NLS KMA+FG S+
Sbjct: 477 NLSEKMAIFGSSI 489
>gi|449466251|ref|XP_004150840.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420-like [Cucumis sativus]
Length = 495
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 191/246 (77%), Positives = 223/246 (90%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M EMGVKPD+VSYNCL+DVYCK+R+++KA+K+V KMRDEDI DVI+YTSIIGGLGLVGQ
Sbjct: 236 MIEMGVKPDVVSYNCLVDVYCKNREMDKAFKVVGKMRDEDIPADVITYTSIIGGLGLVGQ 295
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
PDKAR++LKEMKEYGCYPD AAYNA IRN+CIAKRL +A L+DEMV KGLSPNATTYNL
Sbjct: 296 PDKARNILKEMKEYGCYPDVAAYNATIRNFCIAKRLHEAFDLLDEMVNKGLSPNATTYNL 355
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
FFR+F+WSNDL+S+WNLY RMM TGCLPNTQSC+FLV+L K+ EK E+AL+LWNDM++KG
Sbjct: 356 FFRIFFWSNDLQSAWNLYRRMMDTGCLPNTQSCLFLVRLFKKYEKEEMALELWNDMIQKG 415
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
FGSYILVS+ LFDLLCD+GKL+EAE FL+M++KGHKPS SF+RIK LMELANK EALQ
Sbjct: 416 FGSYILVSEELFDLLCDLGKLIEAESCFLQMVDKGHKPSYTSFKRIKVLMELANKHEALQ 475
Query: 241 NLSNKM 246
NLS KM
Sbjct: 476 NLSKKM 481
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 46/269 (17%), Positives = 106/269 (39%), Gaps = 36/269 (13%)
Query: 12 SYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEM 71
S + ++ + + R+ +K + ++ ++ +D P +IS +++ LG + + R ++
Sbjct: 110 SVDTMLYILGRSRKFDKIWDVLLDVKFKD--PSLISLRTVMVVLGRIAKVCSVRQTVESF 167
Query: 72 KEYGCYP---DAAAYNAAIRNYCIAKRLRD------------------------------ 98
+++ + D +NA +R C K + D
Sbjct: 168 RKFKKFVPEFDVTCFNALLRTLCQEKSMMDARNVYHGLKSMFRPNLQTFNILLSGWKSSE 227
Query: 99 -ASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV 157
A G DEM+E G+ P+ +YN V+ + ++ ++ + +M + + ++
Sbjct: 228 EAEGFFDEMIEMGVKPDVVSYNCLVDVYCKNREMDKAFKVVGKMRDEDIPADVITYTSII 287
Query: 158 KLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHK 217
+ + A + +M E G + + C +L EA EM+ KG
Sbjct: 288 GGLGLVGQPDKARNILKEMKEYGCYPDVAAYNATIRNFCIAKRLHEAFDLLDEMVNKGLS 347
Query: 218 PSQVSFRRIKALMELANKQEALQNLSNKM 246
P+ ++ + +N ++ NL +M
Sbjct: 348 PNATTYNLFFRIFFWSNDLQSAWNLYRRM 376
>gi|449511317|ref|XP_004163923.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420-like [Cucumis sativus]
Length = 495
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 191/246 (77%), Positives = 223/246 (90%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M EMGVKPD+VSYNCL+DVYCK+R+++KA+K+V KMRDEDI DVI+YTSIIGGLGLVGQ
Sbjct: 236 MIEMGVKPDVVSYNCLVDVYCKNREMDKAFKVVGKMRDEDIPADVITYTSIIGGLGLVGQ 295
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
PDKAR++LKEMKEYGCYPD AAYNA IRN+CIAKRL +A L+DEMV KGLSPNATTYNL
Sbjct: 296 PDKARNILKEMKEYGCYPDVAAYNATIRNFCIAKRLHEAFDLLDEMVNKGLSPNATTYNL 355
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
FFR+F+WSNDL+S+WNLY RMM TGCLPNTQSC+FLV+L K+ EK E+AL+LWNDM++KG
Sbjct: 356 FFRIFFWSNDLQSAWNLYRRMMDTGCLPNTQSCLFLVRLFKKYEKEEMALELWNDMIQKG 415
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
FGSYILVS+ LFDLLCD+GKL+EAE FL+M++KGHKPS SF+RIK LMELANK EALQ
Sbjct: 416 FGSYILVSEELFDLLCDLGKLIEAESCFLQMVDKGHKPSYTSFKRIKVLMELANKHEALQ 475
Query: 241 NLSNKM 246
NLS KM
Sbjct: 476 NLSKKM 481
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 46/269 (17%), Positives = 106/269 (39%), Gaps = 36/269 (13%)
Query: 12 SYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEM 71
S + ++ + + R+ +K + ++ ++ +D P +IS +++ LG + + R ++
Sbjct: 110 SVDTMLYILGRSRKFDKIWDVLLDVKFKD--PSLISLRTVMVVLGRIAKVCSVRQTVESF 167
Query: 72 KEYGCYP---DAAAYNAAIRNYCIAKRLRD------------------------------ 98
+++ + D +NA +R C K + D
Sbjct: 168 RKFKKFVPEFDVTCFNALLRTLCQEKSMMDARNVYHGLKSMFRPNLQTFNILLSGWKSSE 227
Query: 99 -ASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV 157
A G DEM+E G+ P+ +YN V+ + ++ ++ + +M + + ++
Sbjct: 228 EAEGFFDEMIEMGVKPDVVSYNCLVDVYCKNREMDKAFKVVGKMRDEDIPADVITYTSII 287
Query: 158 KLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHK 217
+ + A + +M E G + + C +L EA EM+ KG
Sbjct: 288 GGLGLVGQPDKARNILKEMKEYGCYPDVAAYNATIRNFCIAKRLHEAFDLLDEMVNKGLS 347
Query: 218 PSQVSFRRIKALMELANKQEALQNLSNKM 246
P+ ++ + +N ++ NL +M
Sbjct: 348 PNATTYNLFFRIFFWSNDLQSAWNLYRRM 376
>gi|297843042|ref|XP_002889402.1| hypothetical protein ARALYDRAFT_470202 [Arabidopsis lyrata subsp.
lyrata]
gi|297335244|gb|EFH65661.1| hypothetical protein ARALYDRAFT_470202 [Arabidopsis lyrata subsp.
lyrata]
Length = 490
Score = 372 bits (955), Expect = e-101, Method: Compositional matrix adjust.
Identities = 185/256 (72%), Positives = 221/256 (86%), Gaps = 1/256 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G+KPD+V+YN LIDVYCKDR++EKAYK+++KMR+ED +PDVI+YT+IIGGLGL+GQ
Sbjct: 236 MKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEDETPDVITYTTIIGGLGLIGQ 295
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
PDKAR+VLKEMKEYGCYPD AAYNAAIRNYCIA+RL DA L+DEMV+KGLSPNATTYNL
Sbjct: 296 PDKAREVLKEMKEYGCYPDVAAYNAAIRNYCIARRLGDADKLVDEMVKKGLSPNATTYNL 355
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
FFRV +NDL SW LY RM+G GCLPNTQSCMFL+K+ KR EKV++A++LW DMV KG
Sbjct: 356 FFRVLSLANDLGRSWELYERMLGNGCLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKG 415
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
FGSY LVSDVL DLLCD+ K+ EAEK LEM+EKGH+PS VSF+RIK LMELANK + +
Sbjct: 416 FGSYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRIKLLMELANKHDEVN 475
Query: 241 NLSNKMALFGPSMIPK 256
NL KMA+FG + IP+
Sbjct: 476 NLIQKMAIFG-TEIPR 490
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 90/214 (42%), Gaps = 4/214 (1%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
D +N L+ C+++ + A + ++ + PD+ ++ ++ G + A
Sbjct: 178 DTACFNALLRTLCQEKSMTDARNVYHSLKHQ-FQPDLQTFNILLSGWKSSEE---AEAFF 233
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
+EMK G PD YN+ I YC + + A L+D+M E+ +P+ TY
Sbjct: 234 EEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEDETPDVITYTTIIGGLGLI 293
Query: 129 NDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVS 188
+ + M GC P+ + ++ ++ A +L ++MV+KG
Sbjct: 294 GQPDKAREVLKEMKEYGCYPDVAAYNAAIRNYCIARRLGDADKLVDEMVKKGLSPNATTY 353
Query: 189 DVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
++ F +L L + + + M+ G P+ S
Sbjct: 354 NLFFRVLSLANDLGRSWELYERMLGNGCLPNTQS 387
>gi|9857539|gb|AAG00894.1|AC064879_12 Hypothetical protein [Arabidopsis thaliana]
Length = 490
Score = 365 bits (938), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 180/256 (70%), Positives = 219/256 (85%), Gaps = 1/256 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G+KPD+V+YN LIDVYCKDR++EKAYK+++KMR+E+ +PDVI+YT++IGGLGL+GQ
Sbjct: 236 MKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQ 295
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
PDKAR+VLKEMKEYGCYPD AAYNAAIRN+CIA+RL DA L+DEMV+KGLSPNATTYNL
Sbjct: 296 PDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNL 355
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
FFRV +NDL SW LY RM+G CLPNTQSCMFL+K+ KR EKV++A++LW DMV KG
Sbjct: 356 FFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKG 415
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
FGSY LVSDVL DLLCD+ K+ EAEK LEM+EKGH+PS VSF+RIK LMELANK + +
Sbjct: 416 FGSYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRIKLLMELANKHDEVN 475
Query: 241 NLSNKMALFGPSMIPK 256
NL KMA+F + IP+
Sbjct: 476 NLIQKMAIFS-TEIPR 490
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 84/195 (43%), Gaps = 7/195 (3%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
D +N L+ C+++ + A + ++ + PD+ ++ ++ G + A
Sbjct: 178 DTACFNALLRTLCQEKSMTDARNVYHSLKHQ-FQPDLQTFNILLSGWKSSEE---AEAFF 233
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
+EMK G PD YN+ I YC + + A L+D+M E+ +P+ TY
Sbjct: 234 EEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLI 293
Query: 129 NDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVS 188
+ + M GC P+ + ++ ++ A +L ++MV+KG
Sbjct: 294 GQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTY 353
Query: 189 DVLFDLLC---DMGK 200
++ F +L D+G+
Sbjct: 354 NLFFRVLSLANDLGR 368
>gi|15217756|ref|NP_171744.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806504|sp|Q9FZ19.2|PPR5_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g02420
gi|332189307|gb|AEE27428.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 491
Score = 365 bits (938), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 180/256 (70%), Positives = 219/256 (85%), Gaps = 1/256 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G+KPD+V+YN LIDVYCKDR++EKAYK+++KMR+E+ +PDVI+YT++IGGLGL+GQ
Sbjct: 237 MKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQ 296
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
PDKAR+VLKEMKEYGCYPD AAYNAAIRN+CIA+RL DA L+DEMV+KGLSPNATTYNL
Sbjct: 297 PDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNL 356
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
FFRV +NDL SW LY RM+G CLPNTQSCMFL+K+ KR EKV++A++LW DMV KG
Sbjct: 357 FFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKG 416
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
FGSY LVSDVL DLLCD+ K+ EAEK LEM+EKGH+PS VSF+RIK LMELANK + +
Sbjct: 417 FGSYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRIKLLMELANKHDEVN 476
Query: 241 NLSNKMALFGPSMIPK 256
NL KMA+F + IP+
Sbjct: 477 NLIQKMAIFS-TEIPR 491
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 84/195 (43%), Gaps = 7/195 (3%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
D +N L+ C+++ + A + ++ + PD+ ++ ++ G + A
Sbjct: 179 DTACFNALLRTLCQEKSMTDARNVYHSLKHQ-FQPDLQTFNILLSGWKSSEE---AEAFF 234
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
+EMK G PD YN+ I YC + + A L+D+M E+ +P+ TY
Sbjct: 235 EEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLI 294
Query: 129 NDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVS 188
+ + M GC P+ + ++ ++ A +L ++MV+KG
Sbjct: 295 GQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTY 354
Query: 189 DVLFDLLC---DMGK 200
++ F +L D+G+
Sbjct: 355 NLFFRVLSLANDLGR 369
>gi|222624423|gb|EEE58555.1| hypothetical protein OsJ_09859 [Oryza sativa Japonica Group]
Length = 858
Score = 365 bits (936), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 167/261 (63%), Positives = 207/261 (79%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MRE+GV+PD+V+YN LID +CK+R VE AYK++++MR++DISPDVI+YTS+IGGLGL+GQ
Sbjct: 242 MRELGVEPDLVTYNSLIDCHCKNRGVENAYKLLDEMREKDISPDVITYTSLIGGLGLIGQ 301
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
PDKA+ +LKEM E GCYPD AYN AIRN+ IAKRL DA LM+EM KGL PNATTYNL
Sbjct: 302 PDKAKHLLKEMHELGCYPDVPAYNTAIRNFVIAKRLGDAFALMEEMASKGLMPNATTYNL 361
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
FFR +YW+ D+ S+W LY RM GC PNTQSCMF+V+LC R +V AL+LW+DMV G
Sbjct: 362 FFRCYYWAYDIGSAWQLYERMRSEGCFPNTQSCMFIVRLCHRHGRVAQALELWSDMVNNG 421
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
FGS+ LVSDVLFDLLCD GKL EAE+ F +MIE G KPS V+FRRIK LM+LAN++E++
Sbjct: 422 FGSFTLVSDVLFDLLCDEGKLDEAERCFHQMIELGQKPSNVAFRRIKILMQLANREESIA 481
Query: 241 NLSNKMALFGPSMIPKREEYL 261
L+ +MA FG + K L
Sbjct: 482 RLTAQMAQFGREITEKESSVL 502
>gi|115451461|ref|NP_001049331.1| Os03g0208600 [Oryza sativa Japonica Group]
gi|26006498|gb|AAN77307.1| Hypothetical protein [Oryza sativa Japonica Group]
gi|108706773|gb|ABF94568.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113547802|dbj|BAF11245.1| Os03g0208600 [Oryza sativa Japonica Group]
Length = 531
Score = 364 bits (935), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 165/250 (66%), Positives = 204/250 (81%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MRE+GV+PD+V+YN LID +CK+R VE AYK++++MR++DISPDVI+YTS+IGGLGL+GQ
Sbjct: 242 MRELGVEPDLVTYNSLIDCHCKNRGVENAYKLLDEMREKDISPDVITYTSLIGGLGLIGQ 301
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
PDKA+ +LKEM E GCYPD AYN AIRN+ IAKRL DA LM+EM KGL PNATTYNL
Sbjct: 302 PDKAKHLLKEMHELGCYPDVPAYNTAIRNFVIAKRLGDAFALMEEMASKGLMPNATTYNL 361
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
FFR +YW+ D+ S+W LY RM GC PNTQSCMF+V+LC R +V AL+LW+DMV G
Sbjct: 362 FFRCYYWAYDIGSAWQLYERMRSEGCFPNTQSCMFIVRLCHRHGRVAQALELWSDMVNNG 421
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
FGS+ LVSDVLFDLLCD GKL EAE+ F +MIE G KPS V+FRRIK LM+LAN++E++
Sbjct: 422 FGSFTLVSDVLFDLLCDEGKLDEAERCFHQMIELGQKPSNVAFRRIKILMQLANREESIA 481
Query: 241 NLSNKMALFG 250
L+ +MA FG
Sbjct: 482 RLTAQMAQFG 491
>gi|125542844|gb|EAY88983.1| hypothetical protein OsI_10467 [Oryza sativa Indica Group]
Length = 525
Score = 364 bits (935), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 165/250 (66%), Positives = 204/250 (81%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MRE+GV+PD+V+YN LID +CK+R VE AYK++++MR++DISPDVI+YTS+IGGLGL+GQ
Sbjct: 236 MRELGVEPDLVTYNSLIDCHCKNRGVENAYKLLDEMREKDISPDVITYTSLIGGLGLIGQ 295
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
PDKA+ +LKEM E GCYPD AYN AIRN+ IAKRL DA LM+EM KGL PNATTYNL
Sbjct: 296 PDKAKHLLKEMHELGCYPDVPAYNTAIRNFVIAKRLGDAFALMEEMASKGLMPNATTYNL 355
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
FFR +YW+ D+ S+W LY RM GC PNTQSCMF+V+LC R +V AL+LW+DMV G
Sbjct: 356 FFRCYYWAYDIGSAWQLYERMRSEGCFPNTQSCMFIVRLCHRHGRVAQALELWSDMVNNG 415
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
FGS+ LVSDVLFDLLCD GKL EAE+ F +MIE G KPS V+FRRIK LM+LAN++E++
Sbjct: 416 FGSFTLVSDVLFDLLCDEGKLDEAERCFHQMIELGQKPSNVAFRRIKILMQLANREESIA 475
Query: 241 NLSNKMALFG 250
L+ +MA FG
Sbjct: 476 RLTAQMAQFG 485
>gi|357113487|ref|XP_003558534.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420-like [Brachypodium distachyon]
Length = 520
Score = 359 bits (921), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 168/269 (62%), Positives = 211/269 (78%), Gaps = 1/269 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MRE+G+ PD+V+YN LID CK+R VEKAYK++++MR+++ISPDVI+YTS+IGGLGL+GQ
Sbjct: 239 MRELGIDPDLVTYNSLIDCQCKNRDVEKAYKLLDEMREKEISPDVITYTSLIGGLGLIGQ 298
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
PDKAR +LKEM E GC+PD AYNA IRN+ IAKRL DA LMDEM KGL PNATTYNL
Sbjct: 299 PDKARHLLKEMCELGCHPDVPAYNATIRNFVIAKRLGDAFALMDEMASKGLMPNATTYNL 358
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
FFR +YW+ D+ S+W LY RM C PNTQSCMF+V+LC R KV AL+LW+DMV G
Sbjct: 359 FFRFYYWAYDIGSAWLLYERMRSERCFPNTQSCMFIVRLCHRHGKVMQALELWSDMVGNG 418
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
FGS+ LVSDVLFDLLCD GKL EAE+ F +M+E G KPS V+FRRIK LM+LAN++E++
Sbjct: 419 FGSFTLVSDVLFDLLCDEGKLEEAERCFHQMVELGQKPSSVAFRRIKILMQLANREESIS 478
Query: 241 NLSNKMALFGPSMIPKREEYLAEMSASDS 269
L+ KMA FG ++P+ E + + + S
Sbjct: 479 KLNEKMARFG-HLVPEDGEKVYHTAKNTS 506
>gi|242041823|ref|XP_002468306.1| hypothetical protein SORBIDRAFT_01g043390 [Sorghum bicolor]
gi|241922160|gb|EER95304.1| hypothetical protein SORBIDRAFT_01g043390 [Sorghum bicolor]
Length = 519
Score = 357 bits (917), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 162/250 (64%), Positives = 202/250 (80%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MRE+GV+PD+V+YN LID +CK+R VEKAYK++++MR++DISPD+I+YTS+IGGLGL+GQ
Sbjct: 239 MRELGVEPDLVTYNSLIDCHCKNRDVEKAYKLLDEMREKDISPDIITYTSLIGGLGLIGQ 298
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
PDKARD+LKEM E GC PD AYNAAIRN+ IAKRL DA LMD+M KGL PN TTYNL
Sbjct: 299 PDKARDLLKEMHELGCSPDVPAYNAAIRNFVIAKRLGDAFALMDQMASKGLMPNPTTYNL 358
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
FFR +YW+ D+ S+W LY RM GC PNTQSCMF+++LC R KV AL+LW+DMV
Sbjct: 359 FFRCYYWAFDIGSTWRLYERMRSEGCFPNTQSCMFIIRLCHRYGKVGQALELWSDMVSNR 418
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
FGS+ LVSDVLFDLLCD GKL E E+ F +M+E G KPS V+FRRIK LM++A ++E++
Sbjct: 419 FGSFTLVSDVLFDLLCDEGKLEEVERCFCQMVEFGQKPSNVAFRRIKILMQVAKQEESIA 478
Query: 241 NLSNKMALFG 250
L+ KMA FG
Sbjct: 479 RLTEKMAQFG 488
>gi|356536667|ref|XP_003536858.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420-like [Glycine max]
Length = 279
Score = 350 bits (899), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 169/218 (77%), Positives = 190/218 (87%), Gaps = 5/218 (2%)
Query: 32 IVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYC 91
I+++MRD D+SPDVI+YT II GLGL+GQPDKAR+VLKE YGCYPDAAAYN IRN+C
Sbjct: 60 ILDEMRDRDLSPDVITYTCIICGLGLIGQPDKARNVLKE---YGCYPDAAAYN--IRNFC 114
Query: 92 IAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQ 151
IAKRL DA GL++EM KGLSPNATTYNLFFRVF WSNDL+SSWN+Y RMM GCLPNTQ
Sbjct: 115 IAKRLGDAPGLVEEMASKGLSPNATTYNLFFRVFCWSNDLQSSWNMYQRMMIEGCLPNTQ 174
Query: 152 SCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEM 211
CMFL++L KR EKVE+A+QLW DMVEKGFGSY LVSDVLFDLLCDMGKL EAEK FLEM
Sbjct: 175 FCMFLMRLFKRHEKVEMAMQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLEEAEKCFLEM 234
Query: 212 IEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALF 249
+EKG KPS VSFRRIK LMELAN+ EALQ+L+ KMA+F
Sbjct: 235 VEKGQKPSHVSFRRIKVLMELANRHEALQSLTQKMAIF 272
>gi|259490380|ref|NP_001159198.1| uncharacterized protein LOC100304284 [Zea mays]
gi|223942589|gb|ACN25378.1| unknown [Zea mays]
gi|414865313|tpg|DAA43870.1| TPA: hypothetical protein ZEAMMB73_208601 [Zea mays]
Length = 519
Score = 335 bits (860), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 165/270 (61%), Positives = 211/270 (78%), Gaps = 2/270 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MRE+GV+PD+V+YN LID +CK+R V+KAYK++++MR +DISPD+I+YTS+IGGLGL+GQ
Sbjct: 238 MRELGVEPDLVTYNSLIDCHCKNRDVQKAYKLLDEMRHKDISPDIITYTSLIGGLGLIGQ 297
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
PDKA+D+LKEM E GCYPD AYNAAIRN+ IAKRL DA LMD+MV KGL PN TTYNL
Sbjct: 298 PDKAKDLLKEMYELGCYPDVPAYNAAIRNFVIAKRLGDAFALMDQMVSKGLMPNPTTYNL 357
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
FFR +YW+ D+ S+W LY RM GC PNTQSCMF+++LC R KV +AL+LW+DMV
Sbjct: 358 FFRCYYWAFDIGSAWRLYERMRSEGCYPNTQSCMFIIRLCHRYGKVALALELWSDMVSSS 417
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
FGS LVSDVL DLLCD GKL +AE+ F +M+E G KPS V+FRRIK LM+LA ++E++
Sbjct: 418 FGSLTLVSDVLLDLLCDEGKLEDAERCFCQMVELGQKPSNVAFRRIKILMQLAKQEESIA 477
Query: 241 NLSNKMALFG--PSMIPKREEYLAEMSASD 268
L+ KM FG P + +R ++ E S+
Sbjct: 478 RLTEKMIQFGRLPPVDCQRVQHSVESRPSN 507
>gi|449437378|ref|XP_004136469.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
mitochondrial-like [Cucumis sativus]
gi|449503560|ref|XP_004162063.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
mitochondrial-like [Cucumis sativus]
Length = 615
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 82/255 (32%), Positives = 140/255 (54%), Gaps = 7/255 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ + P +V+Y LI+ YC+ R VE A ++V++MR E I P+ I Y I+ LG G+
Sbjct: 293 MKKNKISPTVVTYGTLIEGYCRMRSVEIAIELVDEMRREGIEPNAIVYNPIVDALGEAGR 352
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A +++ P + YN+ ++ YC A L AS ++ M+ +G +P TTYN
Sbjct: 353 FKEALGMMERFMVLEQGPTISTYNSLVKGYCKAGDLSGASKILKMMIGRGFTPTPTTYNY 412
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
FFR F + S +LY +M+ +G P+ + L+K+ +E++ +A+Q+ N+M +G
Sbjct: 413 FFRFFSKYGKIEESMSLYNKMIESGYAPDKLTYHLLLKMLCEEERLNLAVQVCNEMKARG 472
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI------KALMELAN 234
F + S +L LLC M K EA F MI +G P ++F R+ + L ++A+
Sbjct: 473 FDMDLATSTMLMHLLCKMHKFEEAFAEFEHMIHRGIVPQYLTFCRLHDEFMKRGLTKMAS 532
Query: 235 K-QEALQNLSNKMAL 248
K QE + ++ + L
Sbjct: 533 KLQEMMSSVPHSEKL 547
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 99/225 (44%), Gaps = 37/225 (16%)
Query: 2 REMG--VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVG 59
REMG +P I +YN LI+ + + R+++ A ++ +M+ ISP V++Y ++I G +
Sbjct: 257 REMGSSFEPSIRAYNILINGWFRSRKLKHAQRLWFEMKKNKISPTVVTYGTLIEGYCRMR 316
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ A +++ EM+ G P+A YN + A R ++A G+M+ + P +TYN
Sbjct: 317 SVEIAIELVDEMRREGIEPNAIVYNPIVDALGEAGRFKEALGMMERFMVLEQGPTISTYN 376
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ + + DL + + M+G G P +
Sbjct: 377 SLVKGYCKAGDLSGASKILKMMIGRGFTPTPTTY-------------------------- 410
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
+ F GK+ E+ + +MIE G+ P ++++
Sbjct: 411 ---------NYFFRFFSKYGKIEESMSLYNKMIESGYAPDKLTYH 446
>gi|125570550|gb|EAZ12065.1| hypothetical protein OsJ_01947 [Oryza sativa Japonica Group]
Length = 348
Score = 147 bits (371), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 134/246 (54%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR GV+P +V+Y LI+ C R+ ++A ++++MR+E I ++++ I+ L G+
Sbjct: 1 MRLAGVRPTVVTYGTLIEGLCVKRRPDQAIALLDEMREEGIEANLLTCNPIVYALAQAGR 60
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A VL++ YG P+ + +N+ + YC L AS ++ M E+G+SP TYN
Sbjct: 61 FQDAHKVLEKFPLYGVAPNISTFNSLVMGYCKHGDLAGASSVLKVMTERGISPTTRTYNY 120
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
FF F ++D+ S N Y +M+G G P+ + + LVK+ R ++E+ +Q+ +M G
Sbjct: 121 FFMTFAKNSDVESGMNFYSKMIGNGYSPDQLTYVLLVKMLSRANRLELVVQMIQEMRTHG 180
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
F + S +L LLC + EA F +M ++G P ++++++ ++ +Q
Sbjct: 181 FEPDLATSTMLIHLLCRRHQFEEACAEFEDMFKRGIVPQYITYQKLMRELKRLGLVHLIQ 240
Query: 241 NLSNKM 246
L+N M
Sbjct: 241 KLTNLM 246
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/215 (20%), Positives = 88/215 (40%), Gaps = 35/215 (16%)
Query: 36 MRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKR 95
MR + P V++Y ++I GL + +PD+A +L EM+E G + N + A R
Sbjct: 1 MRLAGVRPTVVTYGTLIEGLCVKRRPDQAIALLDEMREEGIEANLLTCNPIVYALAQAGR 60
Query: 96 LRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMF 155
+DA ++++ G++PN +T+N + DL + ++ M G P T++ +
Sbjct: 61 FQDAHKVLEKFPLYGVAPNISTFNSLVMGYCKHGDLAGASSVLKVMTERGISPTTRTYNY 120
Query: 156 LVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
+ VE + ++ +MI G
Sbjct: 121 FFMTFAKNSDVESGMNFYS-----------------------------------KMIGNG 145
Query: 216 HKPSQVSFRRIKALMELANKQEALQNLSNKMALFG 250
+ P Q+++ + ++ AN+ E + + +M G
Sbjct: 146 YSPDQLTYVLLVKMLSRANRLELVVQMIQEMRTHG 180
>gi|356561955|ref|XP_003549241.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
mitochondrial-like [Glycine max]
Length = 622
Score = 146 bits (369), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 134/242 (55%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
++P +V+Y L++ YC+ R+VEKA ++V M E I+P+ I Y II L G+ +A
Sbjct: 307 MRPTVVTYGTLVEGYCRMRRVEKALEMVGDMTKEGIAPNAIVYNPIIDALAEAGRFKEAL 366
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+L+ P + YN+ ++ +C A L AS ++ M+ +G P+ATTYN FFR F
Sbjct: 367 GMLERFHVLEIGPTDSTYNSLVKGFCKAGDLVGASKILKMMISRGFLPSATTYNYFFRYF 426
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ NLY +++ +G P+ + LVK+ +EK+++A+Q+ +M G+ +
Sbjct: 427 SRCRKIEEGMNLYTKLIQSGYTPDRLTYHLLVKMLCEEEKLDLAVQVSKEMRHNGYDMDL 486
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNK 245
S +L LLC + +L EA F +MI +G P ++F+R+KA ++ E Q L
Sbjct: 487 ATSTMLVHLLCKVRRLEEAFVEFEDMIRRGIVPQYLTFQRMKADLKKQGMTEMAQKLCKL 546
Query: 246 MA 247
M+
Sbjct: 547 MS 548
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 52/115 (45%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G P +YN + + R++E+ + K+ +PD ++Y ++ L + D A
Sbjct: 411 GFLPSATTYNYFFRYFSRCRKIEEGMNLYTKLIQSGYTPDRLTYHLLVKMLCEEEKLDLA 470
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
V KEM+ G D A + C +RL +A ++M+ +G+ P T+
Sbjct: 471 VQVSKEMRHNGYDMDLATSTMLVHLLCKVRRLEEAFVEFEDMIRRGIVPQYLTFQ 525
>gi|115436834|ref|NP_001043148.1| Os01g0506100 [Oryza sativa Japonica Group]
gi|56201661|dbj|BAD73125.1| leaf protein -like [Oryza sativa Japonica Group]
gi|113532679|dbj|BAF05062.1| Os01g0506100 [Oryza sativa Japonica Group]
gi|215717162|dbj|BAG95525.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 541
Score = 146 bits (369), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 134/246 (54%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR GV+P +V+Y LI+ C R+ ++A ++++MR+E I ++++ I+ L G+
Sbjct: 209 MRLAGVRPTVVTYGTLIEGLCVKRRPDQAIALLDEMREEGIEANLLTCNPIVYALAQAGR 268
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A VL++ YG P+ + +N+ + YC L AS ++ M E+G+SP TYN
Sbjct: 269 FQDAHKVLEKFPLYGVAPNISTFNSLVMGYCKHGDLAGASSVLKVMTERGISPTTRTYNY 328
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
FF F ++D+ S N Y +M+G G P+ + + LVK+ R ++E+ +Q+ +M G
Sbjct: 329 FFMTFAKNSDVESGMNFYSKMIGNGYSPDQLTYVLLVKMLSRANRLELVVQMIQEMRTHG 388
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
F + S +L LLC + EA F +M ++G P ++++++ ++ +Q
Sbjct: 389 FEPDLATSTMLIHLLCRRHQFEEACAEFEDMFKRGIVPQYITYQKLMRELKRLGLVHLIQ 448
Query: 241 NLSNKM 246
L+N M
Sbjct: 449 KLTNLM 454
>gi|125526118|gb|EAY74232.1| hypothetical protein OsI_02112 [Oryza sativa Indica Group]
Length = 556
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 134/246 (54%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR GV+P +V+Y LI+ C R+ ++A ++++MR+E I ++++ I+ L G+
Sbjct: 209 MRLAGVRPTVVTYGTLIEGLCVKRRPDQAIALLDEMREEGIEANLLTCNPIVYALAQAGR 268
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A VL++ YG P+ + +N+ + YC L AS ++ M E+G+SP TYN
Sbjct: 269 FQDAHKVLEKFPLYGVAPNISTFNSLVMGYCKHGDLAGASSVLKVMTERGISPTTRTYNY 328
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
FF F ++D+ S N Y +M+G G P+ + + LVK+ R ++E+ +Q+ +M G
Sbjct: 329 FFMTFAKNSDVESGMNFYSKMIGNGYSPDQLTYVLLVKMLSRANRLELVVQMIQEMRTHG 388
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
F + S +L LLC + EA F +M ++G P ++++++ ++ +Q
Sbjct: 389 FEPDLATSTMLIHLLCRRHQFEEACAEFEDMFKRGIVPQYITYQKLMRELKRLGLVRLIQ 448
Query: 241 NLSNKM 246
L+N M
Sbjct: 449 KLTNLM 454
>gi|357436823|ref|XP_003588687.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477735|gb|AES58938.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 587
Score = 144 bits (362), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 135/247 (54%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ V+P +V+Y L++ YC+ R+VEKA ++V +M E I P+ I Y II L G+
Sbjct: 280 MKNENVRPSVVTYGTLVEGYCRMRRVEKALEMVGEMTKEGIKPNAIVYNPIIDALAEAGR 339
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A +++ P + YN+ ++ +C A + AS ++ +M+ +G P TTYN
Sbjct: 340 FKEALGMMERFHVLQIGPTLSTYNSLVKGFCKAGDIEGASKILKKMISRGFLPIPTTYNY 399
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
FFR F + NLY +M+ +G P+ + ++K+ +EK+E+A+Q+ +M KG
Sbjct: 400 FFRYFSRCGKVDEGMNLYTKMIESGHNPDRLTYHLVLKMLCEEEKLELAVQVSMEMRHKG 459
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ + S +L LLC M KL EA F +MI +G P ++F+++ ++ E +
Sbjct: 460 YDMDLATSTMLTHLLCKMHKLEEAFAEFEDMIRRGIIPQYLTFQKLNVELKKQGMNEMAR 519
Query: 241 NLSNKMA 247
L + M+
Sbjct: 520 KLCHLMS 526
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 93/217 (42%), Gaps = 4/217 (1%)
Query: 13 YNCLIDVYCKDRQVEKAYKIVEKMRDEDIS--PDVISYTSIIGGLGLVGQPDKARDVLKE 70
+ LID CK+ +A + + + ++ D+ P + Y ++ G + A + +E
Sbjct: 220 FEILIDSLCKEGSAREASEYLLRRKETDLGWVPSIRVYNIMLNGWFRARKLKHAERLWEE 279
Query: 71 MKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSND 130
MK P Y + YC +R+ A ++ EM ++G+ PNA YN +
Sbjct: 280 MKNENVRPSVVTYGTLVEGYCRMRRVEKALEMVGEMTKEGIKPNAIVYNPIIDALAEAGR 339
Query: 131 LRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYILVSD 189
+ + + R P + LVK CK + +E A ++ M+ +GF +
Sbjct: 340 FKEALGMMERFHVLQIGPTLSTYNSLVKGFCKAGD-IEGASKILKKMISRGFLPIPTTYN 398
Query: 190 VLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
F GK+ E + +MIE GH P ++++ +
Sbjct: 399 YFFRYFSRCGKVDEGMNLYTKMIESGHNPDRLTYHLV 435
>gi|242094080|ref|XP_002437530.1| hypothetical protein SORBIDRAFT_10g028820 [Sorghum bicolor]
gi|241915753|gb|EER88897.1| hypothetical protein SORBIDRAFT_10g028820 [Sorghum bicolor]
Length = 540
Score = 143 bits (361), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 131/246 (53%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ GV+P +V+Y ID YC R+ ++A ++++MR+E I ++++ I+ L G+
Sbjct: 210 MRDEGVRPTVVTYGTFIDAYCVMRRPDQAMTLLDQMREEGIQANLLTCNPIVYALAQAGR 269
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A VL++ YG P+ + +N+ + YC L ASG++ M+ +G+SP A TYN
Sbjct: 270 FGDAHKVLEKFPLYGVSPNISTFNSLVFGYCKHGDLAGASGVLKAMLGRGISPTARTYNY 329
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
FF VF + + NLY +M+ G P+ + L+K+ ++E+ LQ+ +M G
Sbjct: 330 FFMVFSRNRSIELGMNLYVKMVSNGYAPDQFTYHLLIKMLCEANRLELTLQMLQEMRNNG 389
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
F S +L LLC EA F +M E+G P +++R + ++ + +Q
Sbjct: 390 FEPDQATSTMLIHLLCRRHHFEEAFAEFEQMFERGIVPQYITYRMLMKELKRLGLVKLVQ 449
Query: 241 NLSNKM 246
L++ M
Sbjct: 450 KLADLM 455
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 102/257 (39%), Gaps = 41/257 (15%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDED--ISPDVISYTSIIGGLGLVGQ 60
E V P I++ +D CK+ A ++V ++R ED +PDV Y ++ G +
Sbjct: 144 EAAVSPLILT----VDALCKEGHPRAAARLVAQVRREDGGWAPDVRVYNILLNGWSRARR 199
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGL--------- 111
DK + M++ G P Y I YC+ +R A L+D+M E+G+
Sbjct: 200 LDKVEKLWAAMRDEGVRPTVVTYGTFIDAYCVMRRPDQAMTLLDQMREEGIQANLLTCNP 259
Query: 112 --------------------------SPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
SPN +T+N + DL + + M+G G
Sbjct: 260 IVYALAQAGRFGDAHKVLEKFPLYGVSPNISTFNSLVFGYCKHGDLAGASGVLKAMLGRG 319
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
P ++ + + R +E+ + L+ MV G+ +L +LC+ +L
Sbjct: 320 ISPTARTYNYFFMVFSRNRSIELGMNLYVKMVSNGYAPDQFTYHLLIKMLCEANRLELTL 379
Query: 206 KSFLEMIEKGHKPSQVS 222
+ EM G +P Q +
Sbjct: 380 QMLQEMRNNGFEPDQAT 396
>gi|115469690|ref|NP_001058444.1| Os06g0694600 [Oryza sativa Japonica Group]
gi|53791827|dbj|BAD53893.1| pentatricopeptide repeat-containing protein-like [Oryza sativa
Japonica Group]
gi|53792848|dbj|BAD53881.1| pentatricopeptide repeat-containing protein-like [Oryza sativa
Japonica Group]
gi|113596484|dbj|BAF20358.1| Os06g0694600 [Oryza sativa Japonica Group]
Length = 484
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 132/243 (54%), Gaps = 1/243 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRD-EDISPDVISYTSIIGGLGLVGQPDK 63
G PD VSY +D YCK + A ++++MR E+ P + +T++I G G+V +
Sbjct: 227 GFVPDAVSYCVRMDAYCKKGRFLDALDLLDEMRKRENCRPTLQVFTTLIYGAGIVRNAIR 286
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
AR + EM ++G PD A+NA + Y A+ L+ +M EM KG+ + +YN
Sbjct: 287 ARQLFDEMGQWGVTPDRGAHNALMGAYVRARDLQSGMTVMSEMERKGIGLDDVSYNTMLC 346
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
F DL W +Y +M+G+G +P T++ M L+K+ + ++ L+LW+ ++ KG
Sbjct: 347 GFQRIGDLEGIWKVYSKMVGSGFMPRTRTTMLLMKVFCENARPDLGLELWDYLLGKGCVP 406
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLS 243
+ DVL LC G ++EA + F EMIE G P++ +FR ++ ++ + E L+ +
Sbjct: 407 HRHALDVLVTGLCCRGVVLEAYRCFREMIEMGMTPTERAFRVLEGFLKRKREFEKLEEIR 466
Query: 244 NKM 246
M
Sbjct: 467 QMM 469
>gi|125598350|gb|EAZ38130.1| hypothetical protein OsJ_22479 [Oryza sativa Japonica Group]
Length = 464
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 132/243 (54%), Gaps = 1/243 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRD-EDISPDVISYTSIIGGLGLVGQPDK 63
G PD VSY +D YCK + A ++++MR E+ P + +T++I G G+V +
Sbjct: 207 GFVPDAVSYCVRMDAYCKKGRFLDALDLLDEMRKRENCRPTLQVFTTLIYGAGIVRNAIR 266
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
AR + EM ++G PD A+NA + Y A+ L+ +M EM KG+ + +YN
Sbjct: 267 ARQLFDEMGQWGVTPDRGAHNALMGAYVRARDLQSGMTVMSEMERKGIGLDDVSYNTMLC 326
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
F DL W +Y +M+G+G +P T++ M L+K+ + ++ L+LW+ ++ KG
Sbjct: 327 GFQRIGDLEGIWKVYSKMVGSGFMPRTRTTMLLMKVFCENARPDLGLELWDYLLGKGCVP 386
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLS 243
+ DVL LC G ++EA + F EMIE G P++ +FR ++ ++ + E L+ +
Sbjct: 387 HRHALDVLVTGLCCRGVVLEAYRCFREMIEMGMTPTERAFRVLEGFLKRKREFEKLEEIR 446
Query: 244 NKM 246
M
Sbjct: 447 QMM 449
>gi|225430190|ref|XP_002282419.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
mitochondrial [Vitis vinifera]
gi|296081989|emb|CBI20994.3| unnamed protein product [Vitis vinifera]
Length = 597
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 131/247 (53%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ VKP +V+Y L++ YC+ R+ EKA ++V +MR + I P+VI Y II L G+
Sbjct: 277 MKRENVKPTVVTYGTLVEGYCRMRRSEKAIELVGEMRGKGIEPNVIVYNPIIDSLAEAGR 336
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A +++ P + YN+ ++ +C A L AS ++ M+ +G P TTYN
Sbjct: 337 FKEAMGMMERCLVSETGPTISTYNSLVKGFCKAGDLVGASKVLKMMISRGFDPTLTTYNY 396
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
FFR F NLY +M+ +G P+ + L+K+ +E++++A+Q+ +M +G
Sbjct: 397 FFRYFSRCGKTEEGMNLYTKMIESGHTPDRLTYHLLIKMMCEEERLDLAVQVSKEMRARG 456
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ S +L LLC M +L EA F +MI +G P ++F R+ + E +
Sbjct: 457 CDLDLATSTMLVHLLCKMHRLEEAFAEFEDMIRRGIVPQYLTFERMNNALRKRGLTEMAR 516
Query: 241 NLSNKMA 247
L + MA
Sbjct: 517 KLCDMMA 523
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 92/221 (41%), Gaps = 4/221 (1%)
Query: 13 YNCLIDVYCKDRQVEKAYKIVEKMRDEDIS--PDVISYTSIIGGLGLVGQPDKARDVLKE 70
+ L+D CK+ V A + ++ R D S P + Y ++ G + +A + +
Sbjct: 217 FKILLDSLCKEGHVRVASEYFDQQRGLDPSWVPSIRVYNVLLNGWFRSRKLKRAEQLWRT 276
Query: 71 MKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSND 130
MK P Y + YC +R A L+ EM KG+ PN YN +
Sbjct: 277 MKRENVKPTVVTYGTLVEGYCRMRRSEKAIELVGEMRGKGIEPNVIVYNPIIDSLAEAGR 336
Query: 131 LRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYILVSD 189
+ + + R + + P + LVK CK + V A ++ M+ +GF + +
Sbjct: 337 FKEAMGMMERCLVSETGPTISTYNSLVKGFCKAGDLVG-ASKVLKMMISRGFDPTLTTYN 395
Query: 190 VLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALM 230
F GK E + +MIE GH P ++++ + +M
Sbjct: 396 YFFRYFSRCGKTEEGMNLYTKMIESGHTPDRLTYHLLIKMM 436
>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
Length = 688
Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 80/223 (35%), Positives = 120/223 (53%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G KPD+V+YN +ID KDR V A + +M D+ I PDV++YT+I+ GL +GQ
Sbjct: 294 MEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQ 353
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A + K+M++ GC PD AYN I + C + + DA + EMV++G+ PNA TY+
Sbjct: 354 LNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYST 413
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F L + L+ M+G +PNT + LV ++ V A ++ M EKG
Sbjct: 414 ILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKG 473
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I + L + C K+ EA K F M+ KG P S+
Sbjct: 474 VEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSY 516
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 117/223 (52%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G KP++V+YN +ID CKDR V A + +M I PD I+Y SI+ GL +GQ
Sbjct: 224 MEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQ 283
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A + K M++ GC PD YN I + + + DA+ + EMV++G+ P+ TY
Sbjct: 284 LNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTT 343
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L + L+ +M GC P+ + ++ + V A++ ++MV++G
Sbjct: 344 ILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRG 403
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + C++G+L EA + F EM+ + P+ ++F
Sbjct: 404 IPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTF 446
Score = 126 bits (317), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 118/226 (52%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++G++PD++++ LI+ C + +++ A ++ +M PDVISY ++I GL G
Sbjct: 154 MFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGN 213
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A V K+M++ GC P+ YN I + C + + DA + EMV +G+ P+A TYN
Sbjct: 214 TNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNS 273
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
L + L+ RM GC P+ + ++ + V A ++MV++G
Sbjct: 274 IVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQG 333
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ + LC +G+L EA + F +M +KG KP V++ I
Sbjct: 334 IPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTI 379
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 120/241 (49%), Gaps = 1/241 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G KPD+V+YN +ID CKDR V A + + +M D I P+ ++Y++I+ G +GQ
Sbjct: 364 MEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQ 423
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + KEM P+ ++ + C + +A + + M EKG+ PN TYN
Sbjct: 424 LDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNA 483
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + ++ M+G GC P+ S L+ +++ A L M K
Sbjct: 484 LMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKK 543
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEAL 239
+ + + LC +G+L++A++ F +M G P+ +++ + L + + EAL
Sbjct: 544 LTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEAL 603
Query: 240 Q 240
+
Sbjct: 604 K 604
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 122/237 (51%), Gaps = 3/237 (1%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
V P+ ++++ L+D C++ V +A + E M ++ + P++ +Y +++ G L + ++AR
Sbjct: 439 VMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEAR 498
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
V + M GC PD +YN I YC ++R+ A L+ +M K L+PN TYN +
Sbjct: 499 KVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGL 558
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ L + L+ +M +G LP + + L LCK E AL+L+ M EK
Sbjct: 559 CYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDE-ALKLFKSMKEKKLEPD 617
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEALQ 240
I++ +L + + GKL A+ F ++ G +P ++ IK L++ EA +
Sbjct: 618 IILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYE 674
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 77/154 (50%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PD+ SYN LI+ YC R+++KA ++ +M + ++P+ ++Y +I+ GL VG+ A
Sbjct: 508 GCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDA 567
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+++ K+M G P Y+ + C L +A L M EK L P+ Y +
Sbjct: 568 QELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEG 627
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK 158
+ L + L+ ++ G P ++ ++K
Sbjct: 628 MFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIK 661
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 96/226 (42%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M M +P IV + + K +Q + +M ++ V S +I L +
Sbjct: 84 MARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNILINCLCRLNH 143
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A V +M + G PD + I C +++ A L +EMV G P+ +YN
Sbjct: 144 VDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNT 203
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
S + + +++ +M GC PN + ++ + V A+ ++MV +G
Sbjct: 204 LINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRG 263
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + + LC +G+L EA + F M + G KP V++ I
Sbjct: 264 IPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNII 309
>gi|225431703|ref|XP_002264696.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial [Vitis vinifera]
gi|296088528|emb|CBI37519.3| unnamed protein product [Vitis vinifera]
Length = 525
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 77/234 (32%), Positives = 129/234 (55%), Gaps = 11/234 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCK----------DRQVEKAYKIVEKMRDEDISPDVISYTS 50
M E G++ ++V+YN L++ C+ +R + A K++++MR + I PDV SY+
Sbjct: 248 MVERGIEANVVTYNVLLNGICRRASLHPDDRFERTIRDAEKVLDEMRQKGIEPDVTSYSI 307
Query: 51 IIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKG 110
+I +P+ D L+ MK+ G +P A Y + ++ C RL DA L+ +MV+ G
Sbjct: 308 VIHVYSRAHKPELTLDKLRMMKDKGIWPTVATYTSVVKCLCSCGRLEDAEELVSDMVKDG 367
Query: 111 LSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGT-GCLPNTQSCMFLVKLCKRQEKVEIA 169
+SP+A TYN FF+ + D ++ LY +M CLP+ + LV + + ++EI
Sbjct: 368 VSPSAATYNCFFKEYRGRKDSDNALRLYRKMKEEYSCLPDMHTYNILVGMFVKLNRMEIV 427
Query: 170 LQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++W+DM G G + +L LC+ K EA F+EMIEKG+ P +++F
Sbjct: 428 QEIWDDMKTSGAGPDLDSYTLLIHGLCEKQKWKEACHFFVEMIEKGYLPQKITF 481
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 105/260 (40%), Gaps = 45/260 (17%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIG---GLGLVGQPDKAR 65
D+VSYN +ID+ K RQ + A++ + +M + P ++ +I GL Q +A
Sbjct: 116 DVVSYNLIIDILAKVRQFDVAWQFIIEMDQNSLEPTSTTFRILIRRSVSAGLTRQAVRAF 175
Query: 66 D-----------------VLKEMKEYGCY---------------PDAAAYNAAIRNYCIA 93
D +L + +YG +A Y I +C
Sbjct: 176 DDMSCFVEKDADSDDFCYLLDTLSKYGYVKLASQIFNQRKFKFEANAKMYTILIYGWCKI 235
Query: 94 KRLRDASGLMDEMVEKGLSPNATTYNLFF-----RVFYWSND-----LRSSWNLYCRMMG 143
R+ A L+ EMVE+G+ N TYN+ R +D +R + + M
Sbjct: 236 NRVSIAERLLGEMVERGIEANVVTYNVLLNGICRRASLHPDDRFERTIRDAEKVLDEMRQ 295
Query: 144 TGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVE 203
G P+ S ++ + R K E+ L M +KG + + LC G+L +
Sbjct: 296 KGIEPDVTSYSIVIHVYSRAHKPELTLDKLRMMKDKGIWPTVATYTSVVKCLCSCGRLED 355
Query: 204 AEKSFLEMIEKGHKPSQVSF 223
AE+ +M++ G PS ++
Sbjct: 356 AEELVSDMVKDGVSPSAATY 375
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 2/132 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDE-DISPDVISYTSIIGGLGLVGQPDK 63
GV P +YNC Y + + A ++ KM++E PD+ +Y ++G + + +
Sbjct: 367 GVSPSAATYNCFFKEYRGRKDSDNALRLYRKMKEEYSCLPDMHTYNILVGMFVKLNRMEI 426
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
+++ +MK G PD +Y I C ++ ++A EM+EKG P T+ +R
Sbjct: 427 VQEIWDDMKTSGAGPDLDSYTLLIHGLCEKQKWKEACHFFVEMIEKGYLPQKITFETLYR 486
Query: 124 VFYWSNDLRSSW 135
S D+ +W
Sbjct: 487 GLIQS-DMLKTW 497
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 85/209 (40%), Gaps = 16/209 (7%)
Query: 42 SPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASG 101
S DV+SY II L V Q D A + EM + P + + IR A R A
Sbjct: 114 SHDVVSYNLIIDILAKVRQFDVAWQFIIEMDQNSLEPTSTTFRILIRRSVSAGLTRQAVR 173
Query: 102 LMDEM---VEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK 158
D+M VEK + Y L Y L S ++ + + +
Sbjct: 174 AFDDMSCFVEKDADSDDFCYLLDTLSKYGYVKLAS--QIFNQRKFKFEANAKMYTILIYG 231
Query: 159 LCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLV----------EAEKSF 208
CK +V IA +L +MVE+G + ++ +VL + +C L +AEK
Sbjct: 232 WCK-INRVSIAERLLGEMVERGIEANVVTYNVLLNGICRRASLHPDDRFERTIRDAEKVL 290
Query: 209 LEMIEKGHKPSQVSFRRIKALMELANKQE 237
EM +KG +P S+ + + A+K E
Sbjct: 291 DEMRQKGIEPDVTSYSIVIHVYSRAHKPE 319
>gi|449457341|ref|XP_004146407.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial-like [Cucumis sativus]
gi|449523938|ref|XP_004168980.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial-like [Cucumis sativus]
Length = 506
Score = 140 bits (353), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 78/234 (33%), Positives = 124/234 (52%), Gaps = 11/234 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCK----------DRQVEKAYKIVEKMRDEDISPDVISYTS 50
M E G++P++V+YN L++ C+ ++ + A K+ ++MR I PDV S++
Sbjct: 229 MVERGIEPNVVTYNVLLNGVCRRASLHPEGRFEKTIRHAEKVFDEMRKRGIEPDVTSFSI 288
Query: 51 IIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKG 110
++ +P+ + D LK+MKE G P A Y + I+ C RL D L++EMV G
Sbjct: 289 VLHVYSRAHKPELSLDKLKQMKELGISPTVATYTSVIKCLCSCGRLEDGENLIEEMVRSG 348
Query: 111 LSPNATTYNLFFRVFYWSNDLRSSWNLYCRMM-GTGCLPNTQSCMFLVKLCKRQEKVEIA 169
+SP+ TTYN FF+ + D + LY +M C P+ + L+ L +K E
Sbjct: 349 ISPSPTTYNCFFKEYRGRKDGAGALRLYKKMREDCLCAPSLHTYNILLALFLNLDKKETL 408
Query: 170 LQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+LWNDM E G G + + LC+ + EA + F+EMIE+G P +V+F
Sbjct: 409 KELWNDMKESGVGPDLDSYTTIIHGLCEKQRWSEACQFFVEMIERGFLPQKVTF 462
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 90/229 (39%), Gaps = 46/229 (20%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G K I + L+DV CK V+ A ++ K R E+ DV YT +I G +G+ + A
Sbjct: 164 GNKVGIDDFCYLLDVLCKYGYVKVAVEVFNK-RKEEFGVDVKIYTILIYGWCKIGRFEMA 222
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYC----------IAKRLRDASGLMDEMVEKGLSPN 114
LK+M E G P+ YN + C K +R A + DEM ++G+ P+
Sbjct: 223 ERFLKDMVERGIEPNVVTYNVLLNGVCRRASLHPEGRFEKTIRHAEKVFDEMRKRGIEPD 282
Query: 115 ATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWN 174
T++++ V+ R K E++L
Sbjct: 283 VTSFSIVLHVY-----------------------------------SRAHKPELSLDKLK 307
Query: 175 DMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
M E G + + LC G+L + E EM+ G PS ++
Sbjct: 308 QMKELGISPTVATYTSVIKCLCSCGRLEDGENLIEEMVRSGISPSPTTY 356
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 65/134 (48%), Gaps = 1/134 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDI-SPDVISYTSIIGGLGLVG 59
M G+ P +YNC Y + A ++ +KMR++ + +P + +Y ++ +
Sbjct: 344 MVRSGISPSPTTYNCFFKEYRGRKDGAGALRLYKKMREDCLCAPSLHTYNILLALFLNLD 403
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ + +++ +MKE G PD +Y I C +R +A EM+E+G P T+
Sbjct: 404 KKETLKELWNDMKESGVGPDLDSYTTIIHGLCEKQRWSEACQFFVEMIERGFLPQKVTFE 463
Query: 120 LFFRVFYWSNDLRS 133
+ +R S+ LR+
Sbjct: 464 MLYRGLIQSDMLRT 477
>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Cucumis sativus]
Length = 786
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 114/216 (52%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ P + +YN +ID CK+ +E + ++ +MR+ +SPDV++Y S+I G G VG ++
Sbjct: 284 GIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEV 343
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ EMK+ GC PD YN I YC +++ A EM GL PN TY+
Sbjct: 344 ASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDA 403
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
F ++ + L+ M TG LPN + L+ + + A +L NDM++ G
Sbjct: 404 FCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLN 463
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQ 220
I+ L D LC G+++EAE+ F M++ G P+Q
Sbjct: 464 IVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQ 499
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 115/245 (46%), Gaps = 3/245 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GVK +IV+Y L+D CK ++ +A ++ M + ISP+ YT+++ G +
Sbjct: 455 MLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAER 514
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A +LK+M E PD Y + I +C ++L + +++EM +G+S N
Sbjct: 515 MEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTT 574
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEK 179
++ + + N + M G + C+ + LCK VE+A+ + M+
Sbjct: 575 IIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCK-AGIVELAVDYFCRMLSL 633
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEA 238
G + V L D LC + A+K F EM +G P +F I ++ N QEA
Sbjct: 634 GLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEA 693
Query: 239 LQNLS 243
L +S
Sbjct: 694 LVLIS 698
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 97/221 (43%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E +KPD++ Y +I +C R++E+ I+E+M+ IS + + T+II G+
Sbjct: 525 MTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGK 584
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A + +EM++ G Y I C A + A M+ GL PN Y
Sbjct: 585 SSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTS 644
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+N + S+ L+ M G P+ + L+ + ++ AL L + M E
Sbjct: 645 LIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELA 704
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQV 221
+ V L G+L +A K F EMIEKG P +V
Sbjct: 705 IEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEV 745
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 85/181 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+++GV+ IV+Y LID CK VE A +M + P+V YTS+I GL
Sbjct: 595 MQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNC 654
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A+ + EM+ G PD A+ A I L++A L+ M E + + Y
Sbjct: 655 IESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTS 714
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F +L + + M+ G LP C+ L++ ++ +++ A++L N+M G
Sbjct: 715 LVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEMERMG 774
Query: 181 F 181
Sbjct: 775 L 775
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 100/235 (42%), Gaps = 1/235 (0%)
Query: 13 YNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMK 72
++ L V+ + +E+A + +MR+ P S ++ L G R +M
Sbjct: 222 FDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMI 281
Query: 73 EYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLR 132
G P YN I C L ++ L +M E GLSP+ TYN + L
Sbjct: 282 GAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLE 341
Query: 133 SSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLF 192
+L+ M GC+P+ + L+ + EK+ A + +++M G ++ L
Sbjct: 342 EVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLI 401
Query: 193 DLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLSNKM 246
D C G + A K F++M G P++ ++ I A + N EA + L++ +
Sbjct: 402 DAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDML 456
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 72/157 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G++P++ Y LID CK+ +E A K+ ++M+ ++PD+ ++T++I G G
Sbjct: 630 MLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGN 689
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++ M E D Y + + + L A +EM+EKG+ P
Sbjct: 690 LQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCIC 749
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV 157
R +Y L + L M G + + + F V
Sbjct: 750 LLREYYKRGQLDEAIELKNEMERMGLITESATMQFPV 786
>gi|255551140|ref|XP_002516618.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544438|gb|EEF45959.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 577
Score = 140 bits (352), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 133/247 (53%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ V P +V+Y L++ YC+ R+VE+A ++V+ MR E I P+ + Y II L G+
Sbjct: 256 MKKNNVSPSVVTYGTLVEGYCRMRRVERAIELVDVMRKEGIEPNALVYNPIIDALAEEGR 315
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ +++ + P + YN+ ++ YC AK AS ++ M+ +G P TTYN
Sbjct: 316 FKEVSGMMEYFLQSESGPTISTYNSLVKGYCKAKDPVGASKVLKMMISRGFVPTPTTYNY 375
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
FFR F + NLY +M+ +G P+ + L+K+ +E++++A+Q+ +M +G
Sbjct: 376 FFRHFSKFGMIEEGMNLYTKMIESGYTPDRLTFHLLLKMLCEEERLDLAVQISKEMRSRG 435
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ S +L L C M + EA F +MI+KG P ++F+R+ + E +
Sbjct: 436 CDMDLATSTMLIHLFCRMHRFEEAFMEFEDMIQKGIVPQYLTFQRLNDELRKRGMVERAR 495
Query: 241 NLSNKMA 247
LS+ M+
Sbjct: 496 KLSDMMS 502
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/217 (19%), Positives = 96/217 (44%), Gaps = 35/217 (16%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P + YN +++ + + R+++ A ++ +M+ ++SP V++Y +++ G + + ++A ++
Sbjct: 228 PHVRIYNIMLNGWFRSRKLKHAERLWLEMKKNNVSPSVVTYGTLVEGYCRMRRVERAIEL 287
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
+ M++ G P+A YN I R ++ SG+M+ ++ P +TYN + +
Sbjct: 288 VDVMRKEGIEPNALVYNPIIDALAEEGRFKEVSGMMEYFLQSESGPTISTYNSLVKGY-- 345
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
CK ++ V A ++ M+ +GF
Sbjct: 346 --------------------------------CKAKDPVG-ASKVLKMMISRGFVPTPTT 372
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
+ F G + E + +MIE G+ P +++F
Sbjct: 373 YNYFFRHFSKFGMIEEGMNLYTKMIESGYTPDRLTFH 409
>gi|413934769|gb|AFW69320.1| hypothetical protein ZEAMMB73_542469 [Zea mays]
Length = 539
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 132/247 (53%), Gaps = 4/247 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ GV+P +V+Y ID +C R+ + A ++++MR+E I ++++ I+ L G+
Sbjct: 209 MRDEGVRPTVVTYGTFIDAHCVMRRPDHAMALLDQMREEGIEANLLTCNPIVYALAHAGR 268
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A VL++ YG P+ + +N+ + YC L AS ++ M+ +G+SP A TYN
Sbjct: 269 FGDAHKVLEKFPLYGVAPNISTFNSLVFGYCRHGDLAGASRVLKAMLGRGISPTARTYNY 328
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
FF VF + + NLY +M+ G P+ + L+K+ ++E+ LQ+ +M G
Sbjct: 329 FFTVFARNLSIDLGMNLYVKMVSNGYAPDRLTYHLLIKMLCEANRLELTLQMLQEMRNSG 388
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
F + S +L LLC + EA F +M E+G P +++R + + EL K+ L
Sbjct: 389 FEPDLATSTMLIHLLCRRHQFEEAFAEFEQMFERGMVPQYITYRML--MREL--KRLGLV 444
Query: 241 NLSNKMA 247
L K+A
Sbjct: 445 KLVQKLA 451
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 95/239 (39%), Gaps = 37/239 (15%)
Query: 17 IDVYCKDRQVEKAYKIVEKMRDED--ISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEY 74
ID CK+ A +V ++R ED +PDV Y ++ G + DKA + M++
Sbjct: 153 IDALCKEGHPRAAALLVAQIRREDDGWAPDVRIYNILLNGWSRARRLDKAEKLWAAMRDE 212
Query: 75 GCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGL----------------------- 111
G P Y I +C+ +R A L+D+M E+G+
Sbjct: 213 GVRPTVVTYGTFIDAHCVMRRPDHAMALLDQMREEGIEANLLTCNPIVYALAHAGRFGDA 272
Query: 112 ------------SPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKL 159
+PN +T+N + DL + + M+G G P ++ + +
Sbjct: 273 HKVLEKFPLYGVAPNISTFNSLVFGYCRHGDLAGASRVLKAMLGRGISPTARTYNYFFTV 332
Query: 160 CKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
R +++ + L+ MV G+ L +L +LC+ +L + EM G +P
Sbjct: 333 FARNLSIDLGMNLYVKMVSNGYAPDRLTYHLLIKMLCEANRLELTLQMLQEMRNSGFEP 391
>gi|357455845|ref|XP_003598203.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355487251|gb|AES68454.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 503
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 125/237 (52%), Gaps = 11/237 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCK----------DRQVEKAYKIVEKMRDEDISPDVISYTS 50
M+ GV+P++V+YN +++ C+ +R + A K+ ++MR+ I PDV S++
Sbjct: 226 MKVKGVEPNVVTYNVILNGICRKASLHPEERFERTIRDAEKVFDEMRESGIEPDVTSFSI 285
Query: 51 IIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKG 110
++ +P D L MKE G P+ Y + I+ C R+ +A L+DEMV G
Sbjct: 286 VLHVYSRAHKPQLVLDKLGLMKEKGICPNVVTYTSVIKCLCSCGRIEEAEDLIDEMVRNG 345
Query: 111 LSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG-CLPNTQSCMFLVKLCKRQEKVEIA 169
+SP A TYN FF+ + D + + +M G C P T + L+ + + + + +
Sbjct: 346 VSPCAATYNCFFKEYRGRKDADKALKFFKKMKEDGLCEPTTHTYGVLIAMFLKADMIGVV 405
Query: 170 LQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++WNDM+E G G + VL LC+ K EA + F+EMIEKG P +V+F +
Sbjct: 406 KEIWNDMMESGVGPDLDSYTVLIHGLCESKKWREACQYFVEMIEKGFLPQKVTFETL 462
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 64/142 (45%), Gaps = 1/142 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDI-SPDVISYTSIIGGLGLVG 59
M GV P +YNC Y + +KA K +KM+++ + P +Y +I
Sbjct: 341 MVRNGVSPCAATYNCFFKEYRGRKDADKALKFFKKMKEDGLCEPTTHTYGVLIAMFLKAD 400
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+++ +M E G PD +Y I C +K+ R+A EM+EKG P T+
Sbjct: 401 MIGVVKEIWNDMMESGVGPDLDSYTVLIHGLCESKKWREACQYFVEMIEKGFLPQKVTFE 460
Query: 120 LFFRVFYWSNDLRSSWNLYCRM 141
+R S+ LR+ L R+
Sbjct: 461 TLYRGLIQSDMLRTWRRLKKRL 482
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 94/257 (36%), Gaps = 45/257 (17%)
Query: 12 SYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEM 71
SYN LID+ K Q + A +++ +M ++ P ++ +I L +A E+
Sbjct: 97 SYNLLIDIVSKVHQFDLASQLIVEMDQINLPPTPTTFFILIKRLISANLTRQAVRAFNEI 156
Query: 72 KEY-------------------------GC----------YPDAAAYNAAIRNYCIAKRL 96
+ Y C D Y I +C R
Sbjct: 157 ESYTDTKLTSDHFTYLLDTLCKYGYVKHACELFNRNSNRFVADVKMYTVLIYGWCKIGRF 216
Query: 97 RDASGLMDEMVEKGLSPNATTYNLFFRVF----------YWSNDLRSSWNLYCRMMGTGC 146
+ A ++EM KG+ PN TYN+ + +R + ++ M +G
Sbjct: 217 KTALSFLNEMKVKGVEPNVVTYNVILNGICRKASLHPEERFERTIRDAEKVFDEMRESGI 276
Query: 147 LPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEK 206
P+ S ++ + R K ++ L M EKG ++ + LC G++ EAE
Sbjct: 277 EPDVTSFSIVLHVYSRAHKPQLVLDKLGLMKEKGICPNVVTYTSVIKCLCSCGRIEEAED 336
Query: 207 SFLEMIEKGHKPSQVSF 223
EM+ G P ++
Sbjct: 337 LIDEMVRNGVSPCAATY 353
>gi|147767583|emb|CAN60200.1| hypothetical protein VITISV_039678 [Vitis vinifera]
Length = 525
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 128/237 (54%), Gaps = 11/237 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCK----------DRQVEKAYKIVEKMRDEDISPDVISYTS 50
M E G+ ++V+YN L++ C+ +R + A K++++MR I PDV SY+
Sbjct: 248 MVERGJXANVVTYNVLLNGICRXASLHPDDRFERTIRDAEKVLDEMRQXGIEPDVTSYSI 307
Query: 51 IIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKG 110
+I +P+ D L+ MK+ G +P A Y + ++ C RL DA L+ +MV+ G
Sbjct: 308 VIHVYSRAHKPELTLDKLRMMKDKGIWPTVATYTSVVKCLCSCGRLEDAEELVSDMVKDG 367
Query: 111 LSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGT-GCLPNTQSCMFLVKLCKRQEKVEIA 169
+SP+A TYN FF+ + D ++ LY +M CLP+ + LV + + ++EI
Sbjct: 368 VSPSAATYNCFFKEYRGRKDSDNALRLYRKMKEEYSCLPDMHTYNILVGMFVKLNRMEIV 427
Query: 170 LQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++W+DM G G + +L LC+ K EA F+EMIEKG+ P +++F +
Sbjct: 428 QEIWDDMKTSGAGPDLDSYTLLIHGLCEKQKWKEACHFFVEMIEKGYLPQKITFETL 484
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 103/260 (39%), Gaps = 45/260 (17%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIG---GLGLVGQPDKAR 65
D+VSYN +ID+ K RQ + A++ + +M + P ++ +I GL Q +A
Sbjct: 116 DVVSYNLIIDILAKVRQFDVAWQFIIEMDQNSLEPTSTTFRILIRRSVSAGLTRQAVRAF 175
Query: 66 D-----------------VLKEMKEYGCY---------------PDAAAYNAAIRNYCIA 93
D +L + +YG +A Y I +C
Sbjct: 176 DDMSCFVEKDADSDDFCYLLDTLSKYGYVKLASQIFNQRKFKFEANAKMYTILIYGWCKI 235
Query: 94 KRLRDASGLMDEMVEKGLSPNATTYNLFFRVF----------YWSNDLRSSWNLYCRMMG 143
R+ A L+ EMVE+GJ N TYN+ + +R + + M
Sbjct: 236 NRVSIAERLLGEMVERGJXANVVTYNVLLNGICRXASLHPDDRFERTIRDAEKVLDEMRQ 295
Query: 144 TGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVE 203
G P+ S ++ + R K E+ L M +KG + + LC G+L +
Sbjct: 296 XGIEPDVTSYSIVIHVYSRAHKPELTLDKLRMMKDKGIWPTVATYTSVVKCLCSCGRLED 355
Query: 204 AEKSFLEMIEKGHKPSQVSF 223
AE+ +M++ G PS ++
Sbjct: 356 AEELVSDMVKDGVSPSAATY 375
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 2/132 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDE-DISPDVISYTSIIGGLGLVGQPDK 63
GV P +YNC Y + + A ++ KM++E PD+ +Y ++G + + +
Sbjct: 367 GVSPSAATYNCFFKEYRGRKDSDNALRLYRKMKEEYSCLPDMHTYNILVGMFVKLNRMEI 426
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
+++ +MK G PD +Y I C ++ ++A EM+EKG P T+ +R
Sbjct: 427 VQEIWDDMKTSGAGPDLDSYTLLIHGLCEKQKWKEACHFFVEMIEKGYLPQKITFETLYR 486
Query: 124 VFYWSNDLRSSW 135
S D+ +W
Sbjct: 487 GLIQS-DMLKTW 497
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 84/209 (40%), Gaps = 16/209 (7%)
Query: 42 SPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASG 101
S DV+SY II L V Q D A + EM + P + + IR A R A
Sbjct: 114 SHDVVSYNLIIDILAKVRQFDVAWQFIIEMDQNSLEPTSTTFRILIRRSVSAGLTRQAVR 173
Query: 102 LMDEM---VEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK 158
D+M VEK + Y L Y L S ++ + + +
Sbjct: 174 AFDDMSCFVEKDADSDDFCYLLDTLSKYGYVKLAS--QIFNQRKFKFEANAKMYTILIYG 231
Query: 159 LCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLV----------EAEKSF 208
CK +V IA +L +MVE+G + ++ +VL + +C L +AEK
Sbjct: 232 WCK-INRVSIAERLLGEMVERGJXANVVTYNVLLNGICRXASLHPDDRFERTIRDAEKVL 290
Query: 209 LEMIEKGHKPSQVSFRRIKALMELANKQE 237
EM + G +P S+ + + A+K E
Sbjct: 291 DEMRQXGIEPDVTSYSIVIHVYSRAHKPE 319
>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 127/245 (51%), Gaps = 1/245 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR + + PDIV++N L+D CK+ +V +A +++ M + + PDV++Y+S++ G L +
Sbjct: 299 MRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSE 358
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR + M GC PD +YN I YC KR+ +A L +EM+ +GL+PN +YN
Sbjct: 359 VVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNT 418
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
LR + NL+ M G LPN + L+ +Q A +L+ M
Sbjct: 419 LIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTY 478
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP-SQVSFRRIKALMELANKQEAL 239
+++ ++L D +C G L +A K F E+ KG +P +Q+ I L + EAL
Sbjct: 479 SKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEAL 538
Query: 240 QNLSN 244
+ N
Sbjct: 539 EAFRN 543
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 117/223 (52%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G +P++V+Y+ +ID + KDR+V +A I M+ + ISPD+ +Y S+I GL Q
Sbjct: 229 MEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQ 288
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A +L EM+ PD +N + C ++ +A G++ M E G+ P+ TY+
Sbjct: 289 WKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSS 348
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ +++ + L+ M+ GC P+ S L+ + ++++ A QL+N+M+ +G
Sbjct: 349 LMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQG 408
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + L LC +G L EA F M G+ P+ ++
Sbjct: 409 LTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTY 451
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 113/241 (46%), Gaps = 1/241 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M EMGV+PD+V+Y+ L+ Y +V +A K+ + M + PDV SY +I G V +
Sbjct: 334 MTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKR 393
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A+ + EM G P+ +YN I C LR+A L M G PN TY++
Sbjct: 394 IDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSI 453
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F ++ L+ M T PN L+ + + A +L++++ KG
Sbjct: 454 LLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKG 513
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
+ + + LC G L EA ++F M E G P ++S+ I+ + ++ A+
Sbjct: 514 LQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAV 573
Query: 240 Q 240
Q
Sbjct: 574 Q 574
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 134/285 (47%), Gaps = 39/285 (13%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
++G++P IV++ LI+ CK + +A ++ + M PDV +YT+II GL +G+
Sbjct: 161 KLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETA 220
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
A +LK+M+E GC P+ Y+ I ++ +R+ +A + M KG+SP+ TYN
Sbjct: 221 AAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLI 280
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCK-------------------- 161
+ + + + L M +P+ + LV +CK
Sbjct: 281 QGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVE 340
Query: 162 ---------------RQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEK 206
R E VE A +L++ M+ KG + ++L + C + ++ EA++
Sbjct: 341 PDVVTYSSLMYGYSLRSEVVE-ARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQ 399
Query: 207 SFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLSNKMALFG 250
F EMI +G P+ VS+ I L +L + +EA +NL M G
Sbjct: 400 LFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREA-RNLFKNMHTNG 443
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 107/224 (47%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ P+I + + LI+ + ++V+ A+ ++ K+ + P ++++T++I L VG+
Sbjct: 124 MELAGLSPNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGK 183
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++ +M GC PD Y I C A+GL+ +M E G PN TY+
Sbjct: 184 FAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYST 243
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+ + +++ M G P+ + L++ LC + E A L N+M
Sbjct: 244 IIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKE-ASALLNEMRSL 302
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I+ +VL D +C GK+ EA+ M E G +P V++
Sbjct: 303 NIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTY 346
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 91/212 (42%), Gaps = 35/212 (16%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G KPD+ SYN LI+ YCK +++++A ++ +M + ++P+ +SY ++I GL +G +A
Sbjct: 373 GCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREA 432
Query: 65 RDVLKEMKEYG-----------------------------------CYPDAAAYNAAIRN 89
R++ K M G P+ YN I
Sbjct: 433 RNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDA 492
Query: 90 YCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPN 149
C + LRDA L E+ KGL PNA Y L + + M GC P+
Sbjct: 493 MCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPD 552
Query: 150 TQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
S +++ + A+QL +M +KGF
Sbjct: 553 EISYNVIIRGFLHHKDESRAVQLIGEMRDKGF 584
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 61/117 (52%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ KP++V YN LID CK + A K+ ++ + + P+ YT+II GL G
Sbjct: 474 MQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGL 533
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
D+A + + M+E GC PD +YN IR + K A L+ EM +KG + T
Sbjct: 534 LDEALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGEMRDKGFIADVGT 590
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 89/217 (41%), Gaps = 1/217 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQV-EKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
P I+ + L+ K Q + + ++M +SP++ + + +I + + D A
Sbjct: 95 PCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLSILINCFSHLQRVDLAFS 154
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
VL ++ + G P + I C + A L D+MV +G P+ TY
Sbjct: 155 VLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLC 214
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+ ++ L +M GC PN + ++ ++ +V AL +++ M KG I
Sbjct: 215 KIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIF 274
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ L LC+ + EA EM P V+F
Sbjct: 275 TYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTF 311
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 88/224 (39%), Gaps = 4/224 (1%)
Query: 18 DVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP-DKARDVLKEMKEYGC 76
D C R ++ A M P +I +T ++ + +GQ D + K+M+ G
Sbjct: 70 DDACSFRNIDDALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGL 129
Query: 77 YPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWN 136
P+ + I + +R+ A ++ ++++ GL P T+ +
Sbjct: 130 SPNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAME 189
Query: 137 LYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLL 195
L+ M+ GC P+ + ++ LCK E A L M E G ++ + D
Sbjct: 190 LFDDMVARGCRPDVYTYTTIINGLCKIGETAAAA-GLLKKMEEAGCQPNVVTYSTIIDSH 248
Query: 196 CDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEA 238
++ EA F M KG P ++ I+ L + +EA
Sbjct: 249 RKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEA 292
>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g02150-like [Cucumis
sativus]
Length = 822
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 113/216 (52%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ P + +YN +ID CK+ +E + ++ +MR+ +SPDV++Y S+I G G VG ++
Sbjct: 225 GIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEV 284
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ EMK+ GC PD YN I YC +++ A EM GL PN TY+
Sbjct: 285 ASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDA 344
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
F ++ + L M TG LPN + L+ + + A +L NDM++ G
Sbjct: 345 FCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLN 404
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQ 220
I+ L D LC G+++EAE+ F M++ G P+Q
Sbjct: 405 IVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQ 440
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 115/245 (46%), Gaps = 3/245 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GVK +IV+Y L+D CK ++ +A ++ M + ISP+ YT+++ G +
Sbjct: 396 MLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAER 455
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A +LK+M E PD Y + I +C ++L + +++EM +G+S N
Sbjct: 456 MEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTT 515
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEK 179
++ + + N + M G + C+ + LC+ VE+A+ + M+
Sbjct: 516 IIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCE-AGIVELAVDYFCRMLSL 574
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEA 238
G + V L D LC + A+K F EM +G P +F I ++ N QEA
Sbjct: 575 GLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEA 634
Query: 239 LQNLS 243
L +S
Sbjct: 635 LVLIS 639
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 97/221 (43%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E +KPD++ Y +I +C R++E+ I+E+M+ IS + + T+II G+
Sbjct: 466 MTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGK 525
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A + +EM++ G Y I C A + A M+ GL PN Y
Sbjct: 526 SSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTS 585
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+N + S+ L+ M G P+ + L+ + ++ AL L + M E
Sbjct: 586 LIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELA 645
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQV 221
+ V L G+L +A K F EMIEKG P +V
Sbjct: 646 IEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEV 686
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 84/176 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+++GV+ IV+Y LID C+ VE A +M + P+V YTS+I GL
Sbjct: 536 MQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNC 595
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A+ + EM+ G PD A+ A I L++A L+ M E + + Y
Sbjct: 596 IESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTS 655
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDM 176
F +L + + M+ G LP C+ L++ ++ +++ A++L N+M
Sbjct: 656 LVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEM 711
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 98/235 (41%), Gaps = 1/235 (0%)
Query: 13 YNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMK 72
++ L V+ + +E+A + +MR+ P S ++ L G R +M
Sbjct: 163 FDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMI 222
Query: 73 EYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLR 132
G P YN I C L ++ L +M E GLSP+ TYN + L
Sbjct: 223 GAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLE 282
Query: 133 SSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLF 192
+L+ M GC+P+ + L+ + EK+ A + +++M G ++ L
Sbjct: 283 EVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLI 342
Query: 193 DLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLSNKM 246
D C G + A K +M G P++ ++ I A + N EA + L++ +
Sbjct: 343 DAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDML 397
>gi|326500578|dbj|BAK06378.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 546
Score = 136 bits (343), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 120/220 (54%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV+P +VSY LI C+ +Q ++A ++++MR E I ++++ I+ L G+ A
Sbjct: 221 GVRPTVVSYGTLIKAVCRVQQPDQAVSLLDEMRKEGIEANLVTCNPIVHALAHAGRFRDA 280
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++L++ YG P+ + +N+ + YC L ASG++ M+ +G+ P A TYN FF
Sbjct: 281 YNLLEKFPLYGVAPNISTFNSLVLAYCKYGDLAGASGVLKAMMGRGILPTAKTYNYFFVF 340
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
F + ++ NLY +M+ G P+ + LVK+ ++E+ +Q+ +M GF S
Sbjct: 341 FAKTGNVELGMNLYNKMVNNGYAPDQTTYNLLVKMLCEANRLELVVQMIKEMRANGFESD 400
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
+ S +L LLC + EA F +M +GH P +++R
Sbjct: 401 LATSTMLIHLLCRSHRFEEACAEFKDMFRRGHVPQYITYR 440
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 108/249 (43%), Gaps = 35/249 (14%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
RE + PD +YN L+D + R+++K K+ +M + P V+SY ++I + V QP
Sbjct: 183 REGELAPDERTYNMLLDGWSTARRMDKVGKLWAEMCVAGVRPTVVSYGTLIKAVCRVQQP 242
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
D+A +L EM++ G + N + A R RDA L+++ G++PN +T+N
Sbjct: 243 DQAVSLLDEMRKEGIEANLVTCNPIVHALAHAGRFRDAYNLLEKFPLYGVAPNISTFNSL 302
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
+ DL + + MMG G LP ++ + + VE+ + L+N
Sbjct: 303 VLAYCKYGDLAGASGVLKAMMGRGILPTAKTYNYFFVFFAKTGNVELGMNLYN------- 355
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQN 241
+M+ G+ P Q ++ + ++ AN+ E +
Sbjct: 356 ----------------------------KMVNNGYAPDQTTYNLLVKMLCEANRLELVVQ 387
Query: 242 LSNKMALFG 250
+ +M G
Sbjct: 388 MIKEMRANG 396
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 48/119 (40%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ P +YN + K VE + KM + +PD +Y ++ L + +
Sbjct: 326 GILPTAKTYNYFFVFFAKTGNVELGMNLYNKMVNNGYAPDQTTYNLLVKMLCEANRLELV 385
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
++KEM+ G D A I C + R +A +M +G P TY + +
Sbjct: 386 VQMIKEMRANGFESDLATSTMLIHLLCRSHRFEEACAEFKDMFRRGHVPQYITYRMLMK 444
>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
Length = 768
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 124/231 (53%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PD+ ++N LID YCK +++ A ++VE+M I+PDVI+Y S++ GL G+ +
Sbjct: 450 GYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEV 509
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ +EM GC P+A YN I N+C +L +ASG++ M + GL P+A ++N
Sbjct: 510 NETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHG 569
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
F + DL ++ L+ ++ G + L+ + +++A +++ +M+ KG+
Sbjct: 570 FCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPD 629
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANK 235
+ +L D LC + A EMI KG PS +F R+ L+ + ++
Sbjct: 630 LYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAMNHR 680
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 122/255 (47%), Gaps = 2/255 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G PDI +YN +I+ CK + A ++ + PDV ++ ++I G +
Sbjct: 411 MVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLK 470
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A +++ M YG PD YN+ + C A + ++ + +EM+ KG PNA TYN+
Sbjct: 471 LDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNI 530
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F N L + + RM G +P+ S L+ R ++ A L+ + EKG
Sbjct: 531 LIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKG 590
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEAL 239
+ + ++L + AEK F EMI KG+KP ++R + L + AN A
Sbjct: 591 YSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAY 650
Query: 240 QNLSNKMAL-FGPSM 253
+L+ ++ F PSM
Sbjct: 651 AHLAEMISKGFVPSM 665
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 109/223 (48%), Gaps = 2/223 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PD V+Y LI+ C + +E+A ++ + + +D+ PD++ Y S++ GL G A
Sbjct: 345 GFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHA 404
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
V+ EM E GC+PD YN I C + DA+ +M++ + KG P+ T+N
Sbjct: 405 LQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDG 464
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSC-MFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
+ L S+ L RM G P+ + L LCK + E+ + + +M+ KG
Sbjct: 465 YCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVN-ETFEEMILKGCRP 523
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ ++L + C + +L EA + M + G P VSF +
Sbjct: 524 NAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTL 566
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 113/224 (50%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD +YN +ID YCK +++A ++++ + PD ++Y S+I GL G
Sbjct: 306 MMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGD 365
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A ++ E + PD YN+ ++ C + A +M+EMVE+G P+ TYN+
Sbjct: 366 IERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNI 425
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
++ + + + G LP+ + L+ CKR K++ ALQL M
Sbjct: 426 IINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRL-KLDSALQLVERMWTY 484
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G ++ + + + LC GK E ++F EMI KG +P+ +++
Sbjct: 485 GIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITY 528
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 107/222 (48%), Gaps = 1/222 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ + + N I C+D ++E+A +VE+M ++PDV++Y +++ GL + +A
Sbjct: 241 GMSANKFTCNIWIRGLCEDGRLEEAVALVERM-GAYVAPDVVTYNTLMRGLCKDSKVQEA 299
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
L M GC PD YN I YC + L++A+ L+ + V KG P+ TY
Sbjct: 300 AQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLING 359
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
D+ + L+ P+ LVK RQ + ALQ+ N+MVE+G
Sbjct: 360 LCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPD 419
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
I +++ + LC MG + +A + I KG+ P +F +
Sbjct: 420 IWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTL 461
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 96/223 (43%), Gaps = 9/223 (4%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P +YN ++D ++A+K+ +M ++PD ++T + L G+P A +
Sbjct: 104 PAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRLKSFCLTGRPHVALRL 163
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L+ + E GC AAY +R +A L DEM+ + + P+ T+N
Sbjct: 164 LRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATFNNVLHALCQ 223
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY--- 184
D+ S L +++ G N +C ++ ++E A+ L M G+Y
Sbjct: 224 KGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERM-----GAYVAP 278
Query: 185 -ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ + L LC K+ EA + M+ +G P ++ I
Sbjct: 279 DVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTI 321
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 97/223 (43%), Gaps = 1/223 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV PD ++ + +C + A +++ + + +Y +++ GL G
Sbjct: 132 MLAAGVAPDARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGH 191
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
AR + EM +PD A +N + C + ++ L+ +++++G+S N T N+
Sbjct: 192 GYNARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNI 251
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ R L + L R MG P+ + L++ + KV+ A Q M+ +G
Sbjct: 252 WIRGLCEDGRLEEAVALVER-MGAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQG 310
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + D C G L EA + + + KG P +V++
Sbjct: 311 CIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTY 353
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 80/182 (43%), Gaps = 8/182 (4%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ PD VS+N LI +C++ ++ AY + +K+ ++ S ++ +IG A
Sbjct: 555 GLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMA 614
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ EM G PD Y + C A + A + EM+ KG P+ T+ +
Sbjct: 615 EKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNL 674
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQ--LWNDMVEKGFG 182
++ + + + M+ G +P +V +K EIA L ++++KG
Sbjct: 675 LAMNHRVSEAVAIIHIMVRMGVVPE------VVDTILSTDKKEIAAPKILVEELMKKGHI 728
Query: 183 SY 184
SY
Sbjct: 729 SY 730
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 99/236 (41%), Gaps = 4/236 (1%)
Query: 13 YNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMK 72
Y I Y + ++ A E+M P +Y +I+ L D+A V M
Sbjct: 74 YVASIQAYARAGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRML 133
Query: 73 EYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLR 132
G PDA + ++++C+ R A L+ + E+G Y R Y
Sbjct: 134 AAGVAPDARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGY 193
Query: 133 SSWNLYCRMMGTGCLPNTQSC-MFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVL 191
++ +L+ M+G P+ + L LC++ + +E L ++++G + ++
Sbjct: 194 NARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESG-ALLAKVLKRGMSANKFTCNIW 252
Query: 192 FDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI-KALMELANKQEALQNLSNKM 246
LC+ G+L EA + +E + P V++ + + L + + QEA Q L M
Sbjct: 253 IRGLCEDGRLEEA-VALVERMGAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMM 307
>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 546
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 138/254 (54%), Gaps = 10/254 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G+ P+ V++N LID +CKD+ V A K+ +M + + P+V++Y S+I GL G+
Sbjct: 227 MRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGK 286
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A + +M P+ +NA + +C K ++ A L D+M ++G++PN TTYN+
Sbjct: 287 VNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNI 346
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ ++ LY M+G G P+ + L+ R+ +E A L ++M K
Sbjct: 347 LIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKH 406
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR----------RIKALM 230
+ ++ ++L D LC+ G++ +A + EM KG KPSQ+++ ++A +
Sbjct: 407 LKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAAL 466
Query: 231 ELANKQEALQNLSN 244
L ++ E + L+N
Sbjct: 467 NLRSQMEKVGRLAN 480
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 113/218 (51%), Gaps = 16/218 (7%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ P++ +YN LID YCKD +E A+ + M + + PDV +Y +I GL G
Sbjct: 332 MPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGD 391
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ AR+++ EM D YN I + C ++ A L+DEM KGL P+ TYN
Sbjct: 392 LEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNT 451
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ +LR++ NL +M G L N + L+K +++K+E A L N+M+EKG
Sbjct: 452 MIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKG 511
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
++ + + ++++ + EM+EKG P
Sbjct: 512 ----LIPNRMTYEIVTE------------EMMEKGFVP 533
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 123/244 (50%), Gaps = 3/244 (1%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGG---LGLVGQPD 62
++P ++S+N +I+ CK ++ KA I+E M+ +S +VI+Y ++I G +G +G+
Sbjct: 159 IEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMY 218
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
KA +LKEM+ G P+ +N I +C K + A + EM +G+ PN TYN
Sbjct: 219 KADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLI 278
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
+ + + L +M+ + PN + L+ + + V+ A +L++DM ++G
Sbjct: 279 NGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGIT 338
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNL 242
+ ++L D C + +A + M+ KG P ++ + A + EA +NL
Sbjct: 339 PNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNL 398
Query: 243 SNKM 246
++M
Sbjct: 399 VSEM 402
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 103/222 (46%), Gaps = 3/222 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+K + S N L+ K ++ + ++M I P +IS+ +I GL VG+ +KA
Sbjct: 123 GLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKA 182
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYC-IAK--RLRDASGLMDEMVEKGLSPNATTYNLF 121
D++++MK G + YN I YC + K ++ A ++ EM G+ PN T+N+
Sbjct: 183 GDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNIL 242
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
F ++ ++ ++ M G PN + L+ KV A L + MV
Sbjct: 243 IDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCL 302
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I+ + L + C + +A + F +M ++G P+ ++
Sbjct: 303 KPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTY 344
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 91/211 (43%), Gaps = 3/211 (1%)
Query: 16 LIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYG 75
L+ Y K+ + ++ ++ D + V S ++ GL VG+ V KEM
Sbjct: 99 LVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRR 158
Query: 76 CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSW 135
P ++N I C +L A ++++M +G+S N TYN + + +
Sbjct: 159 IEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMY 218
Query: 136 N---LYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLF 192
+ M G PN + L+ + + V A++++ +M +G ++ + L
Sbjct: 219 KADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLI 278
Query: 193 DLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ LC+ GK+ EA +M+ KP+ ++
Sbjct: 279 NGLCNNGKVNEATALRDQMVNSCLKPNIITH 309
>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Cucumis sativus]
Length = 749
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 117/226 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P++V+YN +ID YCK R++ +A+K++ M + ++P++ISY +I GL GQ
Sbjct: 229 MERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQ 288
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ ++L+EM + PD +N I YC A L EMV+ GLSPN TY
Sbjct: 289 MKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTT 348
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ +L + +M G PN ++ L+ +Q ++ A Q+ +MVE G
Sbjct: 349 LINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENG 408
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
F I+ + L + C +G++ +A EMIE+G P VS+ I
Sbjct: 409 FTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTI 454
Score = 126 bits (317), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 125/237 (52%), Gaps = 5/237 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ P++V+Y LI+ CK + +A + +++MRD + P+ +YT++I G G
Sbjct: 334 MVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGF 393
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++KEM E G P YNA I +CI R+ DASGL+ EM+E+G P+ +Y+
Sbjct: 394 LKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYST 453
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
F + +L ++ L M+ G P+ + L++ LCK++ E+ L+ +M+
Sbjct: 454 IISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVC-DLFQEMLSL 512
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQ 236
G + L + C G L +A + EMI+KG P V++ L+ NKQ
Sbjct: 513 GLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTY---NVLINGFNKQ 566
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 124/226 (54%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G+ P+ +Y LID + + +++AY+I+++M + +P +I+Y ++I G ++G+
Sbjct: 369 MRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGR 428
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A +L+EM E G PD +Y+ I +C + L A L EMV KG+SP+ TY+
Sbjct: 429 MEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSS 488
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L +L+ M+ G P+ + L+ + ++ AL+L ++M++KG
Sbjct: 489 LIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKG 548
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
F I+ +VL + + EA++ L+++ + P+++++ +
Sbjct: 549 FSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTL 594
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 119/238 (50%), Gaps = 15/238 (6%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G PD+VSY+ +I +C+++++EKA+++ +M + ISPDV +Y+S+I GL +
Sbjct: 439 MIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRR 498
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ D+ +EM G PD Y + I YCI L A L DEM++KG SP+ TYN+
Sbjct: 499 LGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNV 558
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQE-KVEIAL--------- 170
F + + + L +++ +PN + L+ C E K +AL
Sbjct: 559 LINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGL 618
Query: 171 -----QLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ M++KG+ V +V+ +G + +A + EM+ G P V+
Sbjct: 619 MNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTI 676
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 87/180 (48%), Gaps = 2/180 (1%)
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKR-LRDASGLMDEMVEKGLSPNATTYNL 120
+KA ++ K YG P +YNA + K+ ++ A G+ EMVE G+SPN TYN+
Sbjct: 149 NKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNI 208
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
R F + +L + M GCLPN + ++ + K+ A +L M KG
Sbjct: 209 LIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKG 268
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
++ +V+ + LC G++ E + EM ++ + P +V+F I + N +AL
Sbjct: 269 LNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQAL 328
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 95/219 (43%), Gaps = 2/219 (0%)
Query: 26 VEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK-ARDVLKEMKEYGCYPDAAAYN 84
+ KA IV + P V+SY +I+ + Q K A + KEM E G P+ YN
Sbjct: 148 INKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYN 207
Query: 85 AAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGT 144
IR +C A L EM G PN TYN + + ++ L M
Sbjct: 208 ILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALK 267
Query: 145 GCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEA 204
G PN S ++ R+ +++ ++ +M ++ + + + L + C++G +A
Sbjct: 268 GLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQA 327
Query: 205 EKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNL 242
EM++ G P+ V++ I ++ + N A++ L
Sbjct: 328 LVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFL 366
>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Cucumis sativus]
Length = 749
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 117/226 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P++V+YN +ID YCK R++ +A+K++ M + ++P++ISY +I GL GQ
Sbjct: 229 MERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQ 288
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ ++L+EM + PD +N I YC A L EMV+ GLSPN TY
Sbjct: 289 MKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTT 348
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ +L + +M G PN ++ L+ +Q ++ A Q+ +MVE G
Sbjct: 349 LINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENG 408
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
F I+ + L + C +G++ +A EMIE+G P VS+ I
Sbjct: 409 FTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTI 454
Score = 126 bits (317), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 125/237 (52%), Gaps = 5/237 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ P++V+Y LI+ CK + +A + +++MRD + P+ +YT++I G G
Sbjct: 334 MVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGF 393
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++KEM E G P YNA I +CI R+ DASGL+ EM+E+G P+ +Y+
Sbjct: 394 LKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYST 453
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
F + +L ++ L M+ G P+ + L++ LCK++ E+ L+ +M+
Sbjct: 454 IISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVC-DLFQEMLSL 512
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQ 236
G + L + C G L +A + EMI+KG P V++ L+ NKQ
Sbjct: 513 GLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTY---NVLINGFNKQ 566
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 124/226 (54%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G+ P+ +Y LID + + +++AY+I+++M + +P +I+Y ++I G ++G+
Sbjct: 369 MRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGR 428
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A +L+EM E G PD +Y+ I +C + L A L EMV KG+SP+ TY+
Sbjct: 429 MEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSS 488
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L +L+ M+ G P+ + L+ + ++ AL+L ++M++KG
Sbjct: 489 LIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKG 548
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
F I+ +VL + + EA++ L+++ + P+++++ +
Sbjct: 549 FSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTL 594
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 119/237 (50%), Gaps = 15/237 (6%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G PD+VSY+ +I +C+++++EKA+++ +M + ISPDV +Y+S+I GL +
Sbjct: 439 MIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRR 498
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ D+ +EM G PD Y + I YCI L A L DEM++KG SP+ TYN+
Sbjct: 499 LGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNV 558
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQE-KVEIAL--------- 170
F + + + L +++ +PN + L+ C E K +AL
Sbjct: 559 LINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGL 618
Query: 171 -----QLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
++ M++KG+ V +V+ +G + +A + EM+ G P V+
Sbjct: 619 MNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVT 675
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 87/180 (48%), Gaps = 2/180 (1%)
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKR-LRDASGLMDEMVEKGLSPNATTYNL 120
+KA ++ K YG P +YNA + K+ ++ A G+ EMVE G+SPN TYN+
Sbjct: 149 NKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNI 208
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
R F + +L + M GCLPN + ++ + K+ A +L M KG
Sbjct: 209 LIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKG 268
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
++ +V+ + LC G++ E + EM ++ + P +V+F I + N +AL
Sbjct: 269 LNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQAL 328
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 95/219 (43%), Gaps = 2/219 (0%)
Query: 26 VEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK-ARDVLKEMKEYGCYPDAAAYN 84
+ KA IV + P V+SY +I+ + Q K A + KEM E G P+ YN
Sbjct: 148 INKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYN 207
Query: 85 AAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGT 144
IR +C A L EM G PN TYN + + ++ L M
Sbjct: 208 ILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALK 267
Query: 145 GCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEA 204
G PN S ++ R+ +++ ++ +M ++ + + + L + C++G +A
Sbjct: 268 GLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQA 327
Query: 205 EKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNL 242
EM++ G P+ V++ I ++ + N A++ L
Sbjct: 328 LVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFL 366
>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
Length = 597
Score = 133 bits (334), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 117/223 (52%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G +P++V+Y+ LID C+DR V +A I M+ + ISPD+ +YTS+I GL +
Sbjct: 224 MEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSR 283
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A +L EM PD +N + +C ++ +A G++ M E G+ PN TY+
Sbjct: 284 WKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSS 343
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ D+ + L+ M+ GC PN S L+ + ++++ A+QL+N+M+ +G
Sbjct: 344 LMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQG 403
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + L C +GKL EA+ F M G+ P ++
Sbjct: 404 LTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTY 446
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 125/245 (51%), Gaps = 1/245 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + + PDIV++N L+D +CK+ +V +A +++ M + + P+V++Y+S++ G L
Sbjct: 294 MTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTD 353
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR + M GC P+ +YN I YC AKR+ +A L +EM+ +GL+PN +YN
Sbjct: 354 VVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNT 413
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F LR + +L+ M G LP+ + L+ +Q + A +L+ M
Sbjct: 414 LIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTY 473
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS-QVSFRRIKALMELANKQEAL 239
+++ +L +C G +A K F E+ +G +P Q+ I L + EAL
Sbjct: 474 LKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEAL 533
Query: 240 QNLSN 244
+ N
Sbjct: 534 EAFRN 538
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 110/227 (48%), Gaps = 2/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G+ P+I + + ++ +C+ ++V+ + ++ K+ + P ++++T++I GL VG+
Sbjct: 119 MELVGLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGE 178
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++ +M GC PD YN I C A+GL+ +M E G PN TY+
Sbjct: 179 FAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYST 238
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+ + +++ M G P+ + L++ LCK E A L N+M
Sbjct: 239 LIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKE-ASALLNEMTSL 297
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
I+ +VL D C GK+ EA M E G +P+ V++ +
Sbjct: 298 NIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSL 344
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 116/241 (48%), Gaps = 3/241 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M EMGV+P++V+Y+ L+ Y V +A K+ M + P++ SY +I G +
Sbjct: 329 MTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKR 388
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + EM G P+ +YN I +C +LR+A L M G P+ TY++
Sbjct: 389 IDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSI 448
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
F L ++ L+ M T PN LV +CK + A +L++++ +
Sbjct: 449 LLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKD-ARKLFSELFVQ 507
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEA 238
G ++ + + + LC G L EA ++F M G P ++S+ I+ L++ ++ A
Sbjct: 508 GLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRGLLQHKDESRA 567
Query: 239 L 239
L
Sbjct: 568 L 568
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 77/181 (42%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ P+ VSYN LI +C+ ++ +A + M PD+ +Y+ ++ G G
Sbjct: 399 MIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGY 458
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA + + M+ P+ Y + C + +DA L E+ +GL P+ Y
Sbjct: 459 LGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTT 518
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
L + + M GC P+ S +++ + + AL L +M ++G
Sbjct: 519 IINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRGLLQHKDESRALLLVGEMRDRG 578
Query: 181 F 181
F
Sbjct: 579 F 579
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 64/150 (42%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PD+ +Y+ L+D +CK + KA+++ M+ + P+++ YT ++ + G A
Sbjct: 438 GNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDA 497
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
R + E+ G P Y I C L +A M G P+ +YN+ R
Sbjct: 498 RKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRG 557
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCM 154
D + L M G + + + C+
Sbjct: 558 LLQHKDESRALLLVGEMRDRGFIADVRPCL 587
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 62/126 (49%), Gaps = 2/126 (1%)
Query: 102 LMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LC 160
L +M GLSPN T ++F F + +++ +++ G P + L+ LC
Sbjct: 115 LSKQMELVGLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLC 174
Query: 161 KRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQ 220
K E + A++L++DMV KG + + + + LC +G+ A +M E G +P+
Sbjct: 175 KVGEFAQ-AVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNM 233
Query: 221 VSFRRI 226
V++ +
Sbjct: 234 VTYSTL 239
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 88/218 (40%), Gaps = 4/218 (1%)
Query: 24 RQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP-DKARDVLKEMKEYGCYPDAAA 82
R ++ A M P +I + ++ + +GQ D + K+M+ G P+
Sbjct: 71 RNIDDALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYT 130
Query: 83 YNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMM 142
+ + +C +R+ ++ ++++ GL P T+ + + L+ M+
Sbjct: 131 LSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMV 190
Query: 143 GTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKL 201
GC P+ + ++ LCK E A L M E G ++ L D LC +
Sbjct: 191 AKGCQPDVYTYNTIINGLCKIGETAAAA-GLLKKMEEAGCQPNMVTYSTLIDSLCRDRLV 249
Query: 202 VEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEA 238
EA F M KG P ++ I+ L + + +EA
Sbjct: 250 NEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEA 287
>gi|255542990|ref|XP_002512558.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548519|gb|EEF50010.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 511
Score = 133 bits (334), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 133/257 (51%), Gaps = 11/257 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCK----------DRQVEKAYKIVEKMRDEDISPDVISYTS 50
M EMG++ ++V+YN L+D C+ +R + KA K+ ++MR + I PDV S++
Sbjct: 234 MDEMGIEANVVTYNVLLDGICRRAKLQPEGRFERTIMKADKVFDEMRQKGIEPDVTSFSI 293
Query: 51 IIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKG 110
++ +P D LK M+E G P A Y + ++ C R+ DA L+++MV G
Sbjct: 294 LLHVYSRAHKPQLTVDKLKLMEEMGICPTVATYTSVLKCLCSCGRIDDAEELLEQMVRNG 353
Query: 111 LSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG-CLPNTQSCMFLVKLCKRQEKVEIA 169
+SPNA TYN FF+ + D ++ LY ++ C P+ + L+ + + + I
Sbjct: 354 VSPNAATYNCFFKEYRGRKDPETALKLYRKIRQENLCDPSVHTYNILLGMFMKLNRFNIV 413
Query: 170 LQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKAL 229
++WND+ G G + +L LC+ K +A + F+EMIEKG P + +F + A
Sbjct: 414 NEIWNDLRSSGSGPDLDSYTLLVHGLCEKQKWQKACQFFVEMIEKGLLPQKATFEMLYAG 473
Query: 230 MELANKQEALQNLSNKM 246
+ +N + L K+
Sbjct: 474 LIQSNMLRTWRRLKKKL 490
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 84/218 (38%), Gaps = 46/218 (21%)
Query: 16 LIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYG 75
L+D CK ++ A ++ K R P+V YT +I G +G+ D A ++EM E G
Sbjct: 180 LLDTLCKYGYIKVAVEVFNK-RKFRFLPNVRIYTVLIYGWCKIGRIDMAERFIREMDEMG 238
Query: 76 CYPDAAAYNAAIRNYCIAKRLR----------DASGLMDEMVEKGLSPNATTYNLFFRVF 125
+ YN + C +L+ A + DEM +KG+ P+ T++++ V+
Sbjct: 239 IEANVVTYNVLLDGICRRAKLQPEGRFERTIMKADKVFDEMRQKGIEPDVTSFSILLHVY 298
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
R K ++ + M E G +
Sbjct: 299 -----------------------------------SRAHKPQLTVDKLKLMEEMGICPTV 323
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ LC G++ +AE+ +M+ G P+ ++
Sbjct: 324 ATYTSVLKCLCSCGRIDDAEELLEQMVRNGVSPNAATY 361
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 45/105 (42%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P + +YN L+ ++ K + +I +R PD+ SYT ++ GL + KA
Sbjct: 392 PSVHTYNILLGMFMKLNRFNIVNEIWNDLRSSGSGPDLDSYTLLVHGLCEKQKWQKACQF 451
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLS 112
EM E G P A + + LR L ++ E+ ++
Sbjct: 452 FVEMIEKGLLPQKATFEMLYAGLIQSNMLRTWRRLKKKLDEESIA 496
>gi|224084978|ref|XP_002307458.1| predicted protein [Populus trichocarpa]
gi|222856907|gb|EEE94454.1| predicted protein [Populus trichocarpa]
Length = 440
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 136/251 (54%), Gaps = 4/251 (1%)
Query: 2 REM---GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLV 58
REM G +PDIV+Y ++DV CK +V++A IV +M P Y+ ++ G+
Sbjct: 183 REMVSNGCRPDIVTYGIMVDVLCKAGRVDEALGIVNEMDSTVCKPTPFIYSVLVHTYGIE 242
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
+ + A EM+ G PD A YNA I +C A RL++ +++EM KG++PN+ T+
Sbjct: 243 NRIEDAVSTFLEMENNGIEPDVAVYNALIGAFCKANRLKNVYRVLNEMDCKGVTPNSRTF 302
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
N+ + ++ ++ RM+ C P+ + ++K+ +++++ AL++W M
Sbjct: 303 NIILSSLIGRGETDEAYRVFLRMIKV-CEPDADTYTMMIKMFCERDELKKALKVWKYMKL 361
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEA 238
K F + VL + LC+ G + +A EMIEKG +PS V+F R++ L+ +++
Sbjct: 362 KRFMPSMHTFQVLINGLCEKGDVTQACVLLEEMIEKGIRPSGVTFGRLRQLLIKEGREDV 421
Query: 239 LQNLSNKMALF 249
L+ L K+ +
Sbjct: 422 LKFLQKKINVL 432
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 70/149 (46%), Gaps = 1/149 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G++PD+ YN LI +CK +++ Y+++ +M + ++P+ ++ I+ L G+
Sbjct: 255 MENNGIEPDVAVYNALIGAFCKANRLKNVYRVLNEMDCKGVTPNSRTFNIILSSLIGRGE 314
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A V M + C PDA Y I+ +C L+ A + M K P+ T+ +
Sbjct: 315 TDEAYRVFLRMIKV-CEPDADTYTMMIKMFCERDELKKALKVWKYMKLKRFMPSMHTFQV 373
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPN 149
D+ + L M+ G P+
Sbjct: 374 LINGLCEKGDVTQACVLLEEMIEKGIRPS 402
Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 42/208 (20%), Positives = 87/208 (41%), Gaps = 37/208 (17%)
Query: 12 SYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEM 71
+++ +ID K RQ + + +V+ M+ + + +V ++ I+ + ++A M
Sbjct: 58 AFHTVIDSLAKIRQYQLMWDVVKVMKSKRMV-NVETFCIIMRKYARAQKVEEAVYTFNIM 116
Query: 72 KEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDL 131
+Y P+ AA+N + C +K +R A + D + ++ P++ TY++ + +L
Sbjct: 117 DKYDVPPNLAAFNGLLSALCKSKNVRKAQEIFDSIKDR-FVPDSKTYSILLEGWGKDPNL 175
Query: 132 RSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVL 191
+ ++ M+ GC P D+V G ++
Sbjct: 176 PKAREIFREMVSNGCRP--------------------------DIVTYG---------IM 200
Query: 192 FDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
D+LC G++ EA EM KP+
Sbjct: 201 VDVLCKAGRVDEALGIVNEMDSTVCKPT 228
>gi|242096870|ref|XP_002438925.1| hypothetical protein SORBIDRAFT_10g028400 [Sorghum bicolor]
gi|241917148|gb|EER90292.1| hypothetical protein SORBIDRAFT_10g028400 [Sorghum bicolor]
Length = 485
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 129/241 (53%), Gaps = 5/241 (2%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDE-DISPDVISYTSIIGGLGLVGQPDK 63
G PD VSY +D YCK + A +++E+MR + D P + + ++I G G+V +
Sbjct: 228 GFVPDAVSYCVRMDAYCKKGRFLDALELLEEMRKKVDCKPTLQVFATLIYGAGIVRSAAR 287
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
AR + EM+++G PD A+NA + Y + L+ A +M +M KG+ + +YN
Sbjct: 288 ARLLFDEMEKWGVTPDRGAHNALMGAYVRGRDLQSAMTVMGDMERKGIGLDDVSYNTMLC 347
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
F DL W +Y +M+ +G +P T++ M L+K+ + ++ L+LW+ ++ KG
Sbjct: 348 GFQRVGDLEGIWKVYSKMVSSGFMPRTRTTMLLMKVFCENGRPDLGLELWDYLMGKGCVP 407
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALM----ELANKQEAL 239
+ D+L LC G + EA + F E+IE G P++ +FR ++ + EL +E
Sbjct: 408 HRHALDILVTGLCCRGVVSEAYRCFREIIEMGMAPTERAFRVLEGFLRRTRELGKVEEIR 467
Query: 240 Q 240
Q
Sbjct: 468 Q 468
>gi|356573388|ref|XP_003554843.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g61360-like [Glycine max]
Length = 491
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 131/257 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD V++N ID YCK A +++E+M ++ P + + T++I G GLV
Sbjct: 222 MVRRGFSPDGVTFNIRIDAYCKKGCFGDALRLLEEMERRNVVPTIETITTLIHGAGLVRN 281
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA + KE+ DA AYNA I + + AS LMDEMVEK + ++ TY+
Sbjct: 282 KDKAWQLFKEIPSRNMVADAGAYNALITALVRTRDIESASSLMDEMVEKCIELDSVTYHT 341
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F F S + LY +M + +P T++ + L+K + ++++++ LW +VEKG
Sbjct: 342 MFLGFMRSRGIEGVSKLYQKMTQSNFVPKTRTVVMLMKYFCQNYRLDLSVCLWKYLVEKG 401
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ + D+L LC G + +A + +M+E+G S SF ++ + A+ + L+
Sbjct: 402 YCPHAHALDLLVTGLCARGLVHDAFECSKQMLERGRHMSNASFLMLERFLLQASDMDKLK 461
Query: 241 NLSNKMALFGPSMIPKR 257
L + + P R
Sbjct: 462 ELDQMIKKLQTVLPPSR 478
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 69/178 (38%), Gaps = 5/178 (2%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
RE G +N L+ +C RQ+++A + K+ SP+ S ++ G G
Sbjct: 158 REFGTD----EFNVLLKAFCTQRQMKEARSVFAKLVPR-FSPNTKSMNILLLGFKESGNV 212
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
EM G PD +N I YC DA L++EM + + P T
Sbjct: 213 TSVELFYHEMVRRGFSPDGVTFNIRIDAYCKKGCFGDALRLLEEMERRNVVPTIETITTL 272
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ +W L+ + + + + L+ R +E A L ++MVEK
Sbjct: 273 IHGAGLVRNKDKAWQLFKEIPSRNMVADAGAYNALITALVRTRDIESASSLMDEMVEK 330
>gi|125561327|gb|EAZ06775.1| hypothetical protein OsI_29018 [Oryza sativa Indica Group]
Length = 511
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 119/234 (50%), Gaps = 12/234 (5%)
Query: 5 GVKPDIVSYNCLIDVYCK----------DRQVEKAYKIVEKMRDEDISPDVISYTSIIGG 54
G++P+IV+YN L++ C+ DR V A ++++M I PDV SY+ I+
Sbjct: 237 GIEPNIVTYNILLNGICRHASLHPDYRFDRTVRAAEDLLKEMHQRGIEPDVTSYSVILHV 296
Query: 55 LGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPN 114
+P+ + + MKE G P A Y + I+ RL DA L+DEM +G+ P+
Sbjct: 297 YSRAHKPELCLCMFRSMKERGICPTVATYTSVIKCLASCGRLDDAESLLDEMASEGVCPS 356
Query: 115 ATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG--CLPNTQSCMFLVKLCKRQEKVEIALQL 172
TYN FF+ + D+ + LY +M G P+ + L+ + + + + +Q+
Sbjct: 357 PATYNCFFKEYRGRKDVNGALQLYNKMKAPGSPATPDIHTYNILLGMFIKLNQHDTVMQV 416
Query: 173 WNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
WNDM E G + +L LCD K EA + F+EMIE+G P +++F +
Sbjct: 417 WNDMCESTVGPDLNSYTLLVHGLCDNKKWREACQFFMEMIERGFLPQKITFETL 470
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 103/268 (38%), Gaps = 48/268 (17%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
+G +PD + L+D CK + + A ++ K R P+ YT +I G V + D
Sbjct: 167 VGREPDAAEFTTLLDTLCKYKYPKVAAEVFNK-RKYKYEPNEKMYTVLIYGWCKVNRNDM 225
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYC----------IAKRLRDASGLMDEMVEKGLSP 113
A+ LK+M +G P+ YN + C + +R A L+ EM ++G+ P
Sbjct: 226 AQKFLKDMIYHGIEPNIVTYNILLNGICRHASLHPDYRFDRTVRAAEDLLKEMHQRGIEP 285
Query: 114 NATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLW 173
+ T+Y++ V+ R K E+ L ++
Sbjct: 286 DVTSYSVILHVY-----------------------------------SRAHKPELCLCMF 310
Query: 174 NDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMEL 232
M E+G + + L G+L +AE EM +G PS ++ K
Sbjct: 311 RSMKERGICPTVATYTSVIKCLASCGRLDDAESLLDEMASEGVCPSPATYNCFFKEYRGR 370
Query: 233 ANKQEALQNLSNKMALFGPSMIPKREEY 260
+ ALQ L NKM G P Y
Sbjct: 371 KDVNGALQ-LYNKMKAPGSPATPDIHTY 397
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 60/135 (44%), Gaps = 2/135 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMR--DEDISPDVISYTSIIGGLGLV 58
M GV P +YNC Y + V A ++ KM+ +PD+ +Y ++G +
Sbjct: 348 MASEGVCPSPATYNCFFKEYRGRKDVNGALQLYNKMKAPGSPATPDIHTYNILLGMFIKL 407
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
Q D V +M E PD +Y + C K+ R+A EM+E+G P T+
Sbjct: 408 NQHDTVMQVWNDMCESTVGPDLNSYTLLVHGLCDNKKWREACQFFMEMIERGFLPQKITF 467
Query: 119 NLFFRVFYWSNDLRS 133
+R ++ LR+
Sbjct: 468 ETLYRGLIQADMLRT 482
>gi|357444525|ref|XP_003592540.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481588|gb|AES62791.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 507
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 134/247 (54%), Gaps = 1/247 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G +PD+V+Y +I+ YCK ++ ++A I M ++++P Y + I GLG +
Sbjct: 251 MKDDGFQPDVVTYGIIINAYCKAKKYDEAIGIYHDMLSKNVNPSPHIYCTFITGLGNGSR 310
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + ++ K G P+A YNA + YC + R+ DA ++ EM E G+ PNA TY++
Sbjct: 311 MDEAFEFFEKSKASGFPPEAPTYNAVVSAYCWSMRIDDAYRIVGEMKELGIGPNARTYDI 370
Query: 121 FFRVFYWSNDLRSSWNLYCRMMG-TGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ +++++ RM TGC P+ + +V++ + ++++A+ +WN+M +K
Sbjct: 371 ILVHLIKGGRTKEAYSVFQRMSSETGCEPSVSTYAIMVRMFCNENQLDMAMVVWNEMKDK 430
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
G I + L LC KL +A + F +M++ G +P+ F K + A + +
Sbjct: 431 GILPGIHMFSTLIISLCHENKLDDACRYFQQMLDVGIRPTANMFSAFKRALMAAGMENTV 490
Query: 240 QNLSNKM 246
+ + K+
Sbjct: 491 IHFAKKV 497
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 77/173 (44%), Gaps = 2/173 (1%)
Query: 48 YTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMV 107
+ ++I LG + Q +++ EMK+ + ++ R Y AK +++A + M
Sbjct: 123 FHALIEALGKIRQFKMIWNLVDEMKQRKLL-NGDTFSLIARRYVRAKVIKEALKTFERME 181
Query: 108 EKGLSPNATTYNLFFRVFYWSN-DLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKV 166
+ GL P + +N V S + + L+ +M PN +S L++ +Q+ +
Sbjct: 182 KYGLKPQISDFNKLIDVLCKSKFHVEKAQELFDKMRQWNLEPNLKSYTILIEGWSQQQNL 241
Query: 167 EIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
++ +M + GF ++ ++ + C K EA + +M+ K PS
Sbjct: 242 LKVDEVCREMKDDGFQPDVVTYGIIINAYCKAKKYDEAIGIYHDMLSKNVNPS 294
>gi|356499253|ref|XP_003518456.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial-like [Glycine max]
Length = 510
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 124/234 (52%), Gaps = 11/234 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCK----------DRQVEKAYKIVEKMRDEDISPDVISYTS 50
M + G++P++V+YN L++ C+ +R + A ++ ++MR+ I PDV S++
Sbjct: 233 MIDKGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRNAEEVFDQMRESGIEPDVTSFSI 292
Query: 51 IIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKG 110
++ +P D L MKE G P+ Y + I+ L DA L+ EMV G
Sbjct: 293 LLHVYSRAHKPQLVLDKLSLMKEKGICPNVVMYTSVIKCLASCGWLEDAERLLGEMVRDG 352
Query: 111 LSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG-CLPNTQSCMFLVKLCKRQEKVEIA 169
+SP A TYN FF+ F D S+ ++ RM G C+P++ + + L+++ R + +++
Sbjct: 353 VSPCAATYNCFFKEFRGRKDGESALRMFKRMKEDGLCMPSSHTYVILIRMFLRLDMIKVV 412
Query: 170 LQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++W DM E G G + + VL LC+ + EA F+EMIE G P + +F
Sbjct: 413 KEIWQDMKETGAGPDLDLYTVLIHGLCERQRWREACHYFVEMIENGFLPLKGTF 466
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 105/258 (40%), Gaps = 46/258 (17%)
Query: 12 SYNCLIDVYCKDRQVEKAYK-IVEKMRDEDISPDVISYTSIIGGL---GLVGQPDKAR-- 65
S+ LID K RQ + A++ IVE + ++P ++ ++I L GL Q +A
Sbjct: 103 SFTLLIDTMAKVRQFDVAWQLIVEMDQRHHLTPTPSTFLTLIRRLICAGLTRQAVRAFHD 162
Query: 66 -DVLKEMK--------------EYGCY---------------PDAAAYNAAIRNYCIAKR 95
D E K +YG P Y I +C R
Sbjct: 163 IDAFSETKTTPQDFCVLLDTLCKYGHVRLAVEVFNKNKHTFPPTVKMYTVLIYGWCKIGR 222
Query: 96 LRDASGLMDEMVEKGLSPNATTYNLFFRVF----------YWSNDLRSSWNLYCRMMGTG 145
++ A ++EM++KG+ PN TYN+ + +R++ ++ +M +G
Sbjct: 223 IKTAQSFLNEMIDKGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRNAEEVFDQMRESG 282
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
P+ S L+ + R K ++ L + M EKG +++ + L G L +AE
Sbjct: 283 IEPDVTSFSILLHVYSRAHKPQLVLDKLSLMKEKGICPNVVMYTSVIKCLASCGWLEDAE 342
Query: 206 KSFLEMIEKGHKPSQVSF 223
+ EM+ G P ++
Sbjct: 343 RLLGEMVRDGVSPCAATY 360
>gi|413938248|gb|AFW72799.1| hypothetical protein ZEAMMB73_717335 [Zea mays]
Length = 501
Score = 130 bits (327), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 123/247 (49%), Gaps = 11/247 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMR-----DEDISPDVISYTSIIGGL 55
M E G+ P +YN ++ + + Q++ A+ +M+ DE+ PDV+SYT+++ GL
Sbjct: 235 MVESGIAPTKATYNIILKGFFRSGQLQHAWDFFLQMKRRGSNDENCKPDVVSYTTVLHGL 294
Query: 56 GLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNA 115
G+ GQ DKAR V EM GC P A YNA I+ C L DA + D+MV KG PN
Sbjct: 295 GVAGQLDKARKVFDEMSIEGCKPSTATYNALIQVTCKKGNLEDAVAVFDDMVRKGYIPNV 354
Query: 116 TTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWND 175
TY + R + + + L RM GC PN Q+ L++ + ++E L L+
Sbjct: 355 VTYTVLIRGLCHAGKVVRAMKLLDRMKSEGCEPNVQTYNVLIRYSLEEGEIEKGLDLFET 414
Query: 176 MVE-----KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALM 230
M + +Y ++ +F + + A + +EM+++G+ P + F R+ +
Sbjct: 415 MSKGEECLPNQDTYNIIISAMF-VRKRAEDMAVAARMVVEMVDRGYLPRKFMFNRVLNGL 473
Query: 231 ELANKQE 237
L QE
Sbjct: 474 MLTGNQE 480
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 100/227 (44%), Gaps = 41/227 (18%)
Query: 37 RDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRL 96
R I+ D+ + S++ L + KA +++ + E PDA YN +C K
Sbjct: 167 RSHGIAQDLPLFNSLLDALVKSRRASKAASLVRAL-EQRFPPDAVTYNTLADGWCRVKDT 225
Query: 97 RDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRM--------------- 141
A ++ +MVE G++P TYN+ + F+ S L+ +W+ + +M
Sbjct: 226 SRALDILRQMVESGIAPTKATYNIILKGFFRSGQLQHAWDFFLQMKRRGSNDENCKPDVV 285
Query: 142 --------MGT-----------------GCLPNTQSCMFLVKLCKRQEKVEIALQLWNDM 176
+G GC P+T + L+++ ++ +E A+ +++DM
Sbjct: 286 SYTTVLHGLGVAGQLDKARKVFDEMSIEGCKPSTATYNALIQVTCKKGNLEDAVAVFDDM 345
Query: 177 VEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
V KG+ ++ VL LC GK+V A K M +G +P+ ++
Sbjct: 346 VRKGYIPNVVTYTVLIRGLCHAGKVVRAMKLLDRMKSEGCEPNVQTY 392
>gi|75194072|sp|Q9S7R4.1|PP125_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74900, mitochondrial; AltName: Full=Protein
ORGANELLE TRANSCRIPT PROCESSING DEFECT 43; Flags:
Precursor
gi|5882733|gb|AAD55286.1|AC008263_17 Contains a PF|01535 DUF17 domain [Arabidopsis thaliana]
gi|12323885|gb|AAG51911.1|AC013258_5 hypothetical protein; 69434-67986 [Arabidopsis thaliana]
Length = 482
Score = 130 bits (327), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 121/242 (50%), Gaps = 9/242 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+ P++ +YN ++ + + Q+ A++ +M+ D DV++YT+++ G G+ G+
Sbjct: 221 MVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGE 280
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR+V EM G P A YNA I+ C + +A + +EMV +G PN TTYN+
Sbjct: 281 IKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNV 340
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
R + + + L RM GC PN Q+ +++ +VE AL L+ M G
Sbjct: 341 LIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKM---G 397
Query: 181 FGSYILVSDVLFDLLCDM------GKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELAN 234
G + D L+ M +V A K LEM+E+G P + +F R+ + L
Sbjct: 398 SGDCLPNLDTYNILISGMFVRKRSEDMVVAGKLLLEMVERGFIPRKFTFNRVLNGLLLTG 457
Query: 235 KQ 236
Q
Sbjct: 458 NQ 459
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 115/219 (52%), Gaps = 1/219 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G D+ S+N ++DV CK ++VEKAY++ +R S D ++Y I+ G L+ +
Sbjct: 152 MHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGR-FSVDTVTYNVILNGWCLIKR 210
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA +VLKEM E G P+ YN ++ + A ++R A EM ++ + TY
Sbjct: 211 TPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTT 270
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + +++ + N++ M+ G LP+ + ++++ +++ VE A+ ++ +MV +G
Sbjct: 271 VVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRG 330
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
+ + +VL L G+ E+ M +G +P+
Sbjct: 331 YEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPN 369
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 122/250 (48%), Gaps = 7/250 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR + + P ++ + + Y + +KA K+ M + D+ S+ +I+ L +
Sbjct: 117 MRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKR 176
Query: 61 PDKARDVLKEMKEYGCYP-DAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+KA ++ + ++ G + D YN + +C+ KR A ++ EMVE+G++PN TTYN
Sbjct: 177 VEKAYELFRALR--GRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYN 234
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ F+ + +R +W + M C + + +V +++ A ++++M+ +
Sbjct: 235 TMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIRE 294
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALM---ELANK 235
G + + + +LC + A F EM+ +G++P+ ++ I+ L E +
Sbjct: 295 GVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRG 354
Query: 236 QEALQNLSNK 245
+E +Q + N+
Sbjct: 355 EELMQRMENE 364
>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 556
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 126/250 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD+V+Y L++ CK ++A K++++MRD+ +PD+++Y ++ G+ G+
Sbjct: 178 MLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGR 237
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A + LK + YGC P+ +YN ++ C A+R DA LM EM KG PN T+N+
Sbjct: 238 VDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNM 297
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + ++ GC PN+ S ++ +Q+K++ A+ MV G
Sbjct: 298 LISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSG 357
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
I+ + L LC G++ A + ++ +KG P +S+ + + A K E
Sbjct: 358 CYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEAL 417
Query: 241 NLSNKMALFG 250
L N+M G
Sbjct: 418 ELLNEMVTKG 427
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 113/222 (50%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G +P+ VSYN ++ C + E A K++ +M + P+V+++ +I L G + A
Sbjct: 252 GCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPA 311
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++L ++ +YGC P++ +YN + +C K++ A ++ MV G P+ +YN
Sbjct: 312 MEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTA 371
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
++ ++ L ++ GC P S ++ + K E AL+L N+MV KG
Sbjct: 372 LCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPD 431
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
I+ + LC G++ EA K+F ++ + G +P+ V + I
Sbjct: 432 IITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAI 473
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 106/221 (47%), Gaps = 5/221 (2%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
+PD++SYN ++ YC Q++ A ++V M E PD +Y ++I GL G+ D A
Sbjct: 117 EPDVMSYNAMVAGYCVTGQLDNARRLVAAMPME---PDTYTYNTLIRGLCGRGRTDNALA 173
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
VL +M GC PD Y + C + A L+DEM +KG +P+ TYN+
Sbjct: 174 VLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGIC 233
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+ + + GC PNT S ++K E+ E A +L +M KG ++
Sbjct: 234 QEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVV 293
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEK-GHKPSQVSFRRI 226
++L LC G LVE L+ I K G P+ +S+ I
Sbjct: 294 TFNMLISFLCRRG-LVEPAMEILDQIPKYGCTPNSLSYNPI 333
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 97/195 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PDIVSYN L+ C+ +V+ A +++ +++D+ +P +ISY ++I GL G+
Sbjct: 353 MVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGK 412
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A ++L EM G PD Y+ C R+ +A ++ + G+ PN YN
Sbjct: 413 TEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNA 472
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
S+ +L+ M+ GC+PN + L++ + V+ A ++ ++ +G
Sbjct: 473 ILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAREMMAELCSRG 532
Query: 181 FGSYILVSDVLFDLL 195
S LV+ LL
Sbjct: 533 VVSKTLVNKGAIRLL 547
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 93/208 (44%), Gaps = 8/208 (3%)
Query: 16 LIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYG 75
LI C + +A +++ PDV+SY +++ G + GQ D AR ++ M
Sbjct: 96 LIKKLCASGRTAEARRVLA-----SCEPDVMSYNAMVAGYCVTGQLDNARRLVAAMPME- 149
Query: 76 CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSW 135
PD YN IR C R +A ++D+M+ +G P+ TY + + + +
Sbjct: 150 --PDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAV 207
Query: 136 NLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLL 195
L M GC P+ + +V ++ +V+ A++ + G + +++ L
Sbjct: 208 KLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGL 267
Query: 196 CDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
C + +AEK EM KG P+ V+F
Sbjct: 268 CTAERWEDAEKLMAEMSRKGRPPNVVTF 295
>gi|224089100|ref|XP_002308636.1| predicted protein [Populus trichocarpa]
gi|222854612|gb|EEE92159.1| predicted protein [Populus trichocarpa]
Length = 607
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 131/244 (53%), Gaps = 12/244 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ VKP +V+Y L++ Y + R+VE+A ++V++M+ E I + I Y II L G
Sbjct: 287 MKKKNVKPSVVTYGTLVEGYSRMRRVERAIELVDEMKREGIKSNAIVYNPIIDALAEAG- 345
Query: 61 PDKARDVLKEMKEYGC---YPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
+ ++VL M+ + P + YN+ ++ YC A L AS ++ M+ + + P TT
Sbjct: 346 --RFKEVLGMMEHFFLCEEGPTISTYNSLVKGYCKAGDLVGASKILKMMISREVFPTPTT 403
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
YN FFR F + NLY +M+ +G P+ + L+K+ +E++++A+Q+ +M
Sbjct: 404 YNYFFRHFSKCRKIEEGMNLYTKMIESGYTPDRLTYHLLLKMLCEEERLDLAVQISKEMR 463
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI------KALME 231
+G + S + LLC M + EA F +M+ +G P ++F R+ + L E
Sbjct: 464 ARGCDMDLATSTMFTHLLCKMQRFEEAFAEFEDMLRRGIVPQYLTFHRLNDEFRKQGLTE 523
Query: 232 LANK 235
LA +
Sbjct: 524 LARR 527
>gi|242071011|ref|XP_002450782.1| hypothetical protein SORBIDRAFT_05g018050 [Sorghum bicolor]
gi|241936625|gb|EES09770.1| hypothetical protein SORBIDRAFT_05g018050 [Sorghum bicolor]
Length = 528
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/235 (31%), Positives = 120/235 (51%), Gaps = 12/235 (5%)
Query: 1 MREMGVKPDIVSYNCLIDVYCK----------DRQVEKAYKIVEKMRDEDISPDVISYTS 50
M + G++P+IV+YN L++ C+ DR V A ++++MRD I PDV SY+
Sbjct: 250 MLDHGIEPNIVTYNILLNGICRHASLHPDYRFDRTVHSAEDVLKEMRDRGIEPDVTSYSI 309
Query: 51 IIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKG 110
I+ +P+ + + MK+ G P A Y + I+ RL DA L+DEMV +G
Sbjct: 310 ILHVYSRAHKPELCVCMFRSMKDRGICPTVATYTSVIKCLASCGRLEDAETLLDEMVAEG 369
Query: 111 LSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCL--PNTQSCMFLVKLCKRQEKVEI 168
+ P+ TYN FF+ + ND+ + LY +M G L P+ + L+ + + +
Sbjct: 370 VCPSPATYNCFFKEYRGRNDVSGALQLYNKMKQPGSLTAPDIHTYNILLGMFIKLNRHGS 429
Query: 169 ALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+W+DM E G + +L C K EA + F+EMIEKG P +++F
Sbjct: 430 VKDIWSDMCESTVGPDLDSYTLLIHGFCASQKWREACQFFMEMIEKGFLPQKITF 484
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 61/131 (46%), Gaps = 2/131 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDED--ISPDVISYTSIIGGLGLVGQPD 62
GV P +YNC Y V A ++ KM+ +PD+ +Y ++G + +
Sbjct: 369 GVCPSPATYNCFFKEYRGRNDVSGALQLYNKMKQPGSLTAPDIHTYNILLGMFIKLNRHG 428
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
+D+ +M E PD +Y I +C +++ R+A EM+EKG P T+ +
Sbjct: 429 SVKDIWSDMCESTVGPDLDSYTLLIHGFCASQKWREACQFFMEMIEKGFLPQKITFETLY 488
Query: 123 RVFYWSNDLRS 133
R ++ LR+
Sbjct: 489 RGLIQADMLRT 499
>gi|449503427|ref|XP_004161997.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g71060, mitochondrial-like [Cucumis sativus]
Length = 542
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 134/241 (55%), Gaps = 2/241 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G +PD+V++ LI+ +CK R+ ++A ++ +M ++I P + ++I GLG +
Sbjct: 286 MRDEGFEPDVVTFGILINAHCKARKYDEAIRLFHEMEAKNIKPSPHVFCTLINGLGSEKR 345
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + +++K G P+A YNA + YC + ++ A ++DEM + G+ PN+ TY++
Sbjct: 346 LKEALEFFEQLKLSGFAPEAPTYNAVVGAYCWSMKMAYAYRMVDEMRKSGVGPNSRTYDI 405
Query: 121 FFRVFYWSNDLRSSWNLYCRM-MGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ +++++ RM GC P + ++++ +E+V++A+Q+W++M K
Sbjct: 406 ILHHLIKGRKSKEAYSVFQRMSREPGCEPTLSTYDIMIRMFCNEERVDMAIQIWDEMKAK 465
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIK-ALMELANKQEA 238
G + + L + LC KL +A F EM++ G +P F +K AL++ K A
Sbjct: 466 GVLPGMHLFSTLINSLCHEHKLEDACTYFQEMLDVGIRPPATMFSNLKQALLDDGRKDTA 525
Query: 239 L 239
L
Sbjct: 526 L 526
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 92/207 (44%), Gaps = 3/207 (1%)
Query: 47 SYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEM 106
SY +I LG + Q + +++ +MK G + R Y A+++++A ++M
Sbjct: 158 SYNLLIEALGKIKQFNVIWNLVSDMKRKGIL-SRETFALITRRYARARKVKEAVESFEKM 216
Query: 107 VEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKV 166
+ G + +N S +++ + ++ +M P+ +S L++ + + +
Sbjct: 217 EKFGFQMGVSDFNRLLDTLCKSRNVKKAQEVFDKMKHGRFKPDIKSYTILLEGWGQDQNL 276
Query: 167 EIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF-RR 225
+++ +M ++GF ++ +L + C K EA + F EM K KPS F
Sbjct: 277 LKLNEVYREMRDEGFEPDVVTFGILINAHCKARKYDEAIRLFHEMEAKNIKPSPHVFCTL 336
Query: 226 IKALMELANKQEALQNLSN-KMALFGP 251
I L +EAL+ K++ F P
Sbjct: 337 INGLGSEKRLKEALEFFEQLKLSGFAP 363
>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 115/223 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++G+ PD +++N LI+ C + ++++A ++ +M P+VISYT++I GL G
Sbjct: 154 MFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGN 213
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A DV K+M++ GC P+ Y+ I + C + + DA + EMVE+G+ PN TYN
Sbjct: 214 TSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNS 273
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F L + L+ M+G +PNT + LV ++ V A ++ M EKG
Sbjct: 274 IVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKG 333
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I + L D C + EA+K F MI KG P S+
Sbjct: 334 VEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSY 376
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 130/261 (49%), Gaps = 4/261 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+ P++ +YN ++ +C Q+ +A ++ ++M D+ P+ +++T ++ GL G
Sbjct: 259 MVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGM 318
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR V + M E G PD + YNA + YC+ + + +A + + M+ KG +P A +YN+
Sbjct: 319 VSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNI 378
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+ S + + +L M P+T + L++ LC+ E AL L+ +M
Sbjct: 379 LINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKE-ALNLFKEMCSY 437
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
G ++ +L D C G L EA K M EK +P+ V + + M +A K E
Sbjct: 438 GPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVA 497
Query: 240 QNLSNKMALFGPSMIPKREEY 260
+ L +K LFG P Y
Sbjct: 498 KELFSK--LFGDGTRPDIRTY 516
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 106/223 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G KP++V+Y+ +ID CKDR V A + + +M + I P+V +Y SI+ G +GQ
Sbjct: 224 MEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQ 283
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A + KEM P+ + + C + +A + + M EKG+ P+ +TYN
Sbjct: 284 LNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNA 343
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + ++ M+ GC P S L+ + +++ A L +M K
Sbjct: 344 LMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKA 403
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ L LC +G+ EA F EM G P+ V++
Sbjct: 404 LNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTY 446
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 95/177 (53%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G P SYN LI+ YCK R++++A ++ +M + ++PD ++Y++++ GL +G+P +A
Sbjct: 368 GCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEA 427
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++ KEM YG +P+ Y + +C L +A L+ M EK L PN Y +
Sbjct: 428 LNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEG 487
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
+ + L + L+ ++ G G P+ ++ ++K ++ + A L+ M + GF
Sbjct: 488 MFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGF 544
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 107/223 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + +P +V + + + K +Q + +M ++ +V S +I L +
Sbjct: 84 MVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLNH 143
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D + VL +M + G +PDA +NA I C ++++A L +EMV++G PN +Y
Sbjct: 144 VDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTT 203
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + +++ +M GC PN + ++ + V A++ ++MVE+G
Sbjct: 204 VINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERG 263
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + + C++G+L EA + F EM+ + P+ V+F
Sbjct: 264 IPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTF 306
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 84/162 (51%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G P++V+Y L+D +CK +++A K+++ M+++ + P+++ YT +I G+ + G+ + A
Sbjct: 438 GPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVA 497
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+++ ++ G PD Y I+ +A L +M + G PN+ +YN+ +
Sbjct: 498 KELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQG 557
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKV 166
F + D ++ L M+G N + L+ L + E +
Sbjct: 558 FLQNQDSSTAIRLIDEMVGKRFSVNLSTFQMLLDLESQDEII 599
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 91/194 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + PD V+Y+ L+ C+ + ++A + ++M P++++Y ++ G G
Sbjct: 399 MYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGH 458
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A +LK MKE P+ Y I IA +L A L ++ G P+ TY +
Sbjct: 459 LDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTV 518
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ +++L+ +M G LPN+ S +++ + + A++L ++MV K
Sbjct: 519 MIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKR 578
Query: 181 FGSYILVSDVLFDL 194
F + +L DL
Sbjct: 579 FSVNLSTFQMLLDL 592
>gi|449465535|ref|XP_004150483.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Cucumis sativus]
Length = 542
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 134/241 (55%), Gaps = 2/241 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G +PD+V++ LI+ +CK R+ ++A ++ +M ++I P + ++I GLG +
Sbjct: 286 MRDEGFEPDVVTFGILINAHCKARKYDEAIRLFHEMEAKNIKPSPHVFCTLINGLGSEKR 345
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + +++K G P+A YNA + YC + ++ A ++DEM + G+ PN+ TY++
Sbjct: 346 LKEALEFFEQLKLSGFAPEAPTYNAVVGAYCWSMKMAYAYRMVDEMRKSGVGPNSRTYDI 405
Query: 121 FFRVFYWSNDLRSSWNLYCRM-MGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ +++++ RM GC P + ++++ +E+V++A+Q+W++M K
Sbjct: 406 ILHHLIKGRKSKEAYSVFQRMSREPGCEPTLSTYDIMIRMFCNEERVDMAIQIWDEMKAK 465
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIK-ALMELANKQEA 238
G + + L + LC KL +A F EM++ G +P F +K AL++ K A
Sbjct: 466 GVLPGMHLFSTLINSLCHEHKLEDACTYFQEMLDVGIRPPATMFSNLKQALLDDGRKDTA 525
Query: 239 L 239
L
Sbjct: 526 L 526
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 92/207 (44%), Gaps = 3/207 (1%)
Query: 47 SYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEM 106
SY +I LG + Q + +++ +MK G + R Y A+++++A ++M
Sbjct: 158 SYNLLIEALGKIKQFNVIWNLVSDMKRKGIL-SRETFALITRRYARARKVKEAVESFEKM 216
Query: 107 VEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKV 166
+ G + +N S +++ + ++ +M P+ +S L++ + + +
Sbjct: 217 EKFGFQMGVSDFNRLLDTLCKSRNVKKAQEVFDKMKHGRFKPDIKSYTILLEGWGQDQNL 276
Query: 167 EIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF-RR 225
+++ +M ++GF ++ +L + C K EA + F EM K KPS F
Sbjct: 277 LKLNEVYREMRDEGFEPDVVTFGILINAHCKARKYDEAIRLFHEMEAKNIKPSPHVFCTL 336
Query: 226 IKALMELANKQEALQNLSN-KMALFGP 251
I L +EAL+ K++ F P
Sbjct: 337 INGLGSEKRLKEALEFFEQLKLSGFAP 363
>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 115/223 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E+G +PD+V+Y+ LID CKDR V +A I M+ + ISP V+SYTS+I GL +
Sbjct: 222 MGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSR 281
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A +L EM PD ++ I +C + +A G++ M E G+ PN TYN
Sbjct: 282 WKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNS 341
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ + L+ M+ GC P+ S L+ ++++ A QL+N+M+ +G
Sbjct: 342 LMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQG 401
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ L C +GKL EA + F +M G+ P ++
Sbjct: 402 LTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTY 444
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 123/241 (51%), Gaps = 1/241 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + + PDIV+++ LID++CK+ V +A +++ M + + P+VI+Y S++ G L +
Sbjct: 292 MTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQME 351
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR + M GC PD +Y+ I YC+ KR+ +A L +EM+ +GL+PN +Y
Sbjct: 352 VVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTT 411
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F LR + L+ M G LP+ + L++ +Q + A +L+ M
Sbjct: 412 LIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTY 471
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS-QVSFRRIKALMELANKQEAL 239
+++ +L D +C G L A K F E+ G +P Q+ I L + EAL
Sbjct: 472 LKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEAL 531
Query: 240 Q 240
+
Sbjct: 532 E 532
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 120/241 (49%), Gaps = 1/241 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M EMGV+P++++YN L+ Y +V +A K+ + M PDV SY+ +I G +V +
Sbjct: 327 MTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKR 386
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A+ + EM G P+ +Y I +C +LR+A L +M G P+ TY++
Sbjct: 387 IDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSV 446
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F L ++ L+ M GT PN L+ + + A +L++++ G
Sbjct: 447 LLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHG 506
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
+ + + + LC G L EA ++F +M E G P++ S+ I+ ++ ++ A+
Sbjct: 507 LQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAV 566
Query: 240 Q 240
Q
Sbjct: 567 Q 567
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 119/239 (49%), Gaps = 1/239 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G +PD+ +Y +I+ CK + A +++KM + PDV++Y+++I L
Sbjct: 187 MVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRL 246
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A D+ MK G P +Y + I+ C R ++AS +++EM + P+ T++L
Sbjct: 247 VNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSL 306
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+F ++ + + M G PN + L+ Q +V A +L++ M+ +G
Sbjct: 307 LIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRG 366
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEA 238
+ +L + C + ++ EA++ F EMI +G P+ VS+ I A +L +EA
Sbjct: 367 CKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREA 425
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 104/227 (45%), Gaps = 2/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ P+ + N LI+ +C + V+ + ++ K+ + P +I++T++I GL G+
Sbjct: 117 MELAGLSPNTCTLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGE 176
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++ +M GC PD Y I C A+GL+ +M E G P+ TY+
Sbjct: 177 FAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYST 236
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+ + +++ M G P S L++ LC E A + N+M
Sbjct: 237 LIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKE-ASAMLNEMTSL 295
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
I+ +L D+ C G ++EA+ M E G +P+ +++ +
Sbjct: 296 NIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSL 342
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 66/145 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD+ +Y+ L++ +CK + KA+++ M+ + P+++ YT +I + G
Sbjct: 432 MHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGN 491
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ AR + E+ +G PD Y I C L +A +M E G PN +YN+
Sbjct: 492 LNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNV 551
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTG 145
R F D + L M G
Sbjct: 552 IIRGFLQHKDESRAVQLIGEMRDKG 576
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 79/181 (43%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ P+ VSY LI +C+ ++ +A ++ + M PD+ +Y+ ++ G G
Sbjct: 397 MIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGY 456
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA + + M+ P+ Y I + C + L A L E+ GL P+ Y
Sbjct: 457 LGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTT 516
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
L + + +M GC PN S +++ + + A+QL +M +KG
Sbjct: 517 IINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKG 576
Query: 181 F 181
F
Sbjct: 577 F 577
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 85/217 (39%), Gaps = 1/217 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAY-KIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
P I+ +N L+ + RQ A + ++M +SP+ + +I L+ D
Sbjct: 88 PCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLNILINCFCLMQHVDLGFS 147
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
VL ++ + G P + I C A A L D+MV +G P+ TY
Sbjct: 148 VLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLC 207
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+ ++ L +M GC P+ + L+ + V AL +++ M KG ++
Sbjct: 208 KMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVV 267
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
L LC + EA EM P V+F
Sbjct: 268 SYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTF 304
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 39/75 (52%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G++PD+ Y +I+ CK+ +++A + KM ++ P+ SY II G +A
Sbjct: 506 GLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRA 565
Query: 65 RDVLKEMKEYGCYPD 79
++ EM++ G D
Sbjct: 566 VQLIGEMRDKGFVAD 580
>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 583
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 136/251 (54%), Gaps = 7/251 (2%)
Query: 1 MREM---GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGL 57
M+EM + P+ V++N LID +CKD V A K E+M+ + + P++++Y S+I GL
Sbjct: 261 MKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCN 320
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
G+ ++A D+ +M G P+ YNA I +C K +++A+ + D++ ++ L PN T
Sbjct: 321 NGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVIT 380
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPN--TQSCMFLVKLCKRQEKVEIALQLWND 175
+N + + ++L M+ G LPN T +C+ + LC++Q+ ++ A +L N+
Sbjct: 381 FNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCL-IAGLCRKQD-LQAAKELLNE 438
Query: 176 MVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANK 235
M KG ++ ++L D LC K AEK EM G KP+ V++ + + K
Sbjct: 439 MENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGK 498
Query: 236 QEALQNLSNKM 246
+A N+ +M
Sbjct: 499 LKAALNVRTRM 509
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 101/211 (47%), Gaps = 16/211 (7%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P+++++N +ID YCK+ +E+ + + M DE I P+V +Y +I GL A+++
Sbjct: 376 PNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKEL 435
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L EM+ G D YN I C + R+A L++EM GL PN TYN +
Sbjct: 436 LNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCM 495
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
L+++ N+ RM PN + L+K + K+E A L N+M+EKG
Sbjct: 496 EGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTT 555
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
D++ LEM+EKG P
Sbjct: 556 YDIV----------------RLEMLEKGFSP 570
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 117/230 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G+KP+IV+YN LI+ +CK + +++A K+ + + +++ P+VI++ ++I G
Sbjct: 334 MVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGM 393
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++ + M + G P+ + YN I C + L+ A L++EM KGL + TYN+
Sbjct: 394 MEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNI 453
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++ R++ L M G PN + L+ + K++ AL + M ++
Sbjct: 454 LIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKER 513
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALM 230
++ +VL C + KL A EM+EKG P++ ++ ++ M
Sbjct: 514 KQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIVRLEM 563
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 104/228 (45%), Gaps = 3/228 (1%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
++ G K + S N L+ K+ ++ + ++M I ++ ++ I GL G+
Sbjct: 157 KDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKL 216
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYC---IAKRLRDASGLMDEMVEKGLSPNATTY 118
+KA D +++MK +G P+ YN + YC A ++ A M EM+ + PN T+
Sbjct: 217 NKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTF 276
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
N F ++ ++ + M G PN + L+ K+E A+ LW+ MV
Sbjct: 277 NTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVG 336
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G I+ + L + C + EA K F ++ ++ P+ ++F +
Sbjct: 337 LGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTM 384
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 93/214 (43%), Gaps = 3/214 (1%)
Query: 16 LIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYG 75
L+ Y K+ ++ AY+ + +D + S ++ L + V KEM +
Sbjct: 136 LVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRR 195
Query: 76 CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF---YWSNDLR 132
+ + +N I C A +L A +++M G+SPN TYN + + +
Sbjct: 196 IHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMY 255
Query: 133 SSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLF 192
+ M+ PN + L+ + E V A + + +M ++G I+ + L
Sbjct: 256 KAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLI 315
Query: 193 DLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ LC+ GKL EA + +M+ G KP+ V++ +
Sbjct: 316 NGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNAL 349
>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
Length = 457
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 133/250 (53%), Gaps = 4/250 (1%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD+V+Y L++ CK ++A K++++MRD+ +PD+++Y ++ G+ G+ D A +
Sbjct: 65 PDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEF 124
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
LK + YGC P+ +YN ++ C A+R DA LM EM +KG PN T+N+
Sbjct: 125 LKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCR 184
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ + + ++ GC PN+ S L+ +Q+K++ A+ + MV +G I+
Sbjct: 185 KGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVS 244
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLSNKM 246
+ L LC G++ A + ++ +KG P +S+ I L + +EAL+ L N+M
Sbjct: 245 YNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALE-LLNEM 303
Query: 247 ALFG--PSMI 254
G P +I
Sbjct: 304 VSKGLQPDII 313
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 116/228 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G PDIV+YN +++ C++ +V+ A + ++ + P+ +SY ++ GL +
Sbjct: 93 MRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAER 152
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A +++ EM + GC P+ +N I C + A +++++ + G +PN+ +YN
Sbjct: 153 WEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNP 212
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + + M+ GC P+ S L+ R +V++A++L + + +KG
Sbjct: 213 LLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKG 272
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKA 228
++ + + D L GK EA + EM+ KG +P +++ I A
Sbjct: 273 CAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAA 320
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 126/256 (49%), Gaps = 2/256 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G +P+ VSYN ++ C + E A +++ +M + P+V+++ +I L G + A
Sbjct: 132 GCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPA 191
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+VL+++ +YGC P++ +YN + +C K++ A +D MV +G P+ +YN
Sbjct: 192 LEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTA 251
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
S ++ + L ++ GC P S ++ + K + AL+L N+MV KG
Sbjct: 252 LCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPD 311
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSN 244
I+ + LC ++ +A ++F ++ + G +P+ V + I ++ L ++E +
Sbjct: 312 IITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAI--ILGLCKRRETHSAIDL 369
Query: 245 KMALFGPSMIPKREEY 260
+ G +P Y
Sbjct: 370 FAYMIGNGCMPNESTY 385
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 98/194 (50%), Gaps = 1/194 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PDIVSYN L+ C+ +V+ A +++ +++D+ +P +ISY ++I GL G+
Sbjct: 233 MVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGK 292
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++L EM G PD Y+ C R+ DA ++ + G+ PN YN
Sbjct: 293 TKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNA 352
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ S+ +L+ M+G GC+PN + L++ + ++ A L +++ +
Sbjct: 353 IILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRA 412
Query: 181 FGSYILVSDVLFDL 194
G IL+ L D+
Sbjct: 413 -GEEILLDVHLIDV 425
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 101/214 (47%), Gaps = 5/214 (2%)
Query: 11 VSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKE 70
++YN ++ YC Q++ A ++V +M + PD +Y ++I GL G+ A VL E
Sbjct: 1 MAYNAMVAGYCGAGQLDAARRLVAEM---PVEPDAYTYNTLIRGLCGRGRTANALAVLDE 57
Query: 71 MKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSND 130
M C PD Y + C + A L+DEM +KG +P+ TYN+
Sbjct: 58 MLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGR 117
Query: 131 LRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDV 190
+ + + GC PNT S ++K E+ E A +L +M +KG ++ ++
Sbjct: 118 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 177
Query: 191 LFDLLCDMGKLVEAEKSFLEMIEK-GHKPSQVSF 223
L LC G LVE LE I K G P+ +S+
Sbjct: 178 LISFLCRKG-LVEPALEVLEQIPKYGCTPNSLSY 210
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 103/223 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G P++V++N LI C+ VE A +++E++ +P+ +SY ++ +
Sbjct: 163 MGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKK 222
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA L M GCYPD +YN + C + + A L+ ++ +KG +P +YN
Sbjct: 223 MDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNT 282
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + L M+ G P+ + + R++++E A++ + + + G
Sbjct: 283 VIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMG 342
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + + LC + A F MI G P++ ++
Sbjct: 343 IRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTY 385
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 86/185 (46%), Gaps = 3/185 (1%)
Query: 46 ISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDE 105
++Y +++ G GQ D AR ++ EM PDA YN IR C R +A ++DE
Sbjct: 1 MAYNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDE 57
Query: 106 MVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEK 165
M+ + P+ TY + + + + L M GC P+ + +V ++ +
Sbjct: 58 MLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGR 117
Query: 166 VEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR 225
V+ A++ ++ G + +++ LC + +AE+ EM +KG P+ V+F
Sbjct: 118 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 177
Query: 226 IKALM 230
+ + +
Sbjct: 178 LISFL 182
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 81/169 (47%), Gaps = 3/169 (1%)
Query: 82 AYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRM 141
AYNA + YC A +L A L+ EM + P+A TYN R ++ + M
Sbjct: 2 AYNAMVAGYCGAGQLDAARRLVAEM---PVEPDAYTYNTLIRGLCGRGRTANALAVLDEM 58
Query: 142 MGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKL 201
+ C+P+ + L++ ++ + A++L ++M +KG I+ +V+ + +C G++
Sbjct: 59 LRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRV 118
Query: 202 VEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFG 250
+A + + G +P+ VS+ + + A + E + L +M G
Sbjct: 119 DDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKG 167
>gi|22128587|gb|AAM52339.1| fertility restorer [Petunia x hybrida]
Length = 592
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 119/220 (54%), Gaps = 1/220 (0%)
Query: 1 MREMGV-KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVG 59
+ E G+ KPD YN +ID +CKD ++ A ++ +M+ ++I PD+I+YTS+I GLG +
Sbjct: 203 LMEQGITKPDTCIYNIVIDAFCKDGMLDGATSLLNEMKQKNIPPDIITYTSLIDGLGKLS 262
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
Q +K R + EM YPD +N+ I C ++ DA +M M+EKG+ PN TYN
Sbjct: 263 QWEKVRTLFLEMIHLNIYPDVCTFNSVIDGLCKEGKVEDAEEIMTYMIEKGVEPNEITYN 322
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ + + + ++ M+ G P+ S L+ ++K++ A+QL+ ++ +
Sbjct: 323 VVMDGYCLRGQMGRARRIFDSMIDKGIEPDIISYTALINGYVEKKKMDKAMQLFREISQN 382
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
G I+ VL L ++G+ A+ F EM GH P+
Sbjct: 383 GLKPSIVTCSVLLRGLFEVGRTECAKIFFDEMQAAGHIPN 422
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 108/223 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + + PD+ ++N +ID CK+ +VE A +I+ M ++ + P+ I+Y ++ G L GQ
Sbjct: 274 MIHLNIYPDVCTFNSVIDGLCKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQ 333
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR + M + G PD +Y A I Y K++ A L E+ + GL P+ T ++
Sbjct: 334 MGRARRIFDSMIDKGIEPDIISYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSV 393
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
R + + + M G +PN + L+ + VE A+ ++ + +
Sbjct: 394 LLRGLFEVGRTECAKIFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRR 453
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ I + + + LC GKL +A +F ++ G P +++
Sbjct: 454 EDTNIQIYTAVINGLCKNGKLDKAHATFEKLPLIGLHPDVITY 496
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 115/241 (47%), Gaps = 8/241 (3%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDI-SPDVISYTSIIGGLGLVGQPDK 63
G+ + V++ LI + +V+ A + +K+ E+I PD + Y +++ GL G K
Sbjct: 137 GIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPDEVMYGTVMDGLCKKGHTQK 196
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
A D+L+ M++ PD YN I +C L A+ L++EM +K + P+ TY
Sbjct: 197 AFDLLRLMEQGITKPDTCIYNIVIDAFCKDGMLDGATSLLNEMKQKNIPPDIITYTSLID 256
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMF---LVKLCKRQEKVEIALQLWNDMVEKG 180
+ L+ M+ P+ C F + LCK + KVE A ++ M+EKG
Sbjct: 257 GLGKLSQWEKVRTLFLEMIHLNIYPDV--CTFNSVIDGLCK-EGKVEDAEEIMTYMIEKG 313
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
+ +V+ D C G++ A + F MI+KG +P +S+ I +E +A+
Sbjct: 314 VEPNEITYNVVMDGYCLRGQMGRARRIFDSMIDKGIEPDIISYTALINGYVEKKKMDKAM 373
Query: 240 Q 240
Q
Sbjct: 374 Q 374
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 65/116 (56%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
+I Y +I+ CK+ +++KA+ EK+ + PDVI+YT++I G G D+A+D+L
Sbjct: 457 NIQIYTAVINGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDML 516
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++M++ GC PD YN +R + + ++ + + E+ K S A T L +
Sbjct: 517 RKMEDNGCLPDNRTYNVIVRGFFRSSKVSEMKAFLKEIAGKSFSFEAATVELLMDI 572
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/255 (20%), Positives = 105/255 (41%), Gaps = 42/255 (16%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G++PDI+SY LI+ Y + ++++KA ++ ++ + P +++ + ++ GL VG+
Sbjct: 344 MIDKGIEPDIISYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFEVGR 403
Query: 61 PDKARDVLKEMKEYGCYPDAAA-----------------------------------YNA 85
+ A+ EM+ G P+ Y A
Sbjct: 404 TECAKIFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTA 463
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
I C +L A +++ GL P+ TY + L + ++ +M G
Sbjct: 464 VINGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNG 523
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
CLP+ ++ +V+ R KV ++ K F ++L D++ + +
Sbjct: 524 CLPDNRTYNVIVRGFFRSSKVSEMKAFLKEIAGKSFSFEAATVELLMDIIAE-------D 576
Query: 206 KSFLEMIEKGHKPSQ 220
S L MI + H+ ++
Sbjct: 577 PSLLNMIPEFHRDNK 591
>gi|15239018|ref|NP_196692.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174149|sp|Q9LFM6.1|PP375_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g11310, mitochondrial; Flags: Precursor
gi|8953393|emb|CAB96666.1| putative protein [Arabidopsis thaliana]
gi|110738090|dbj|BAF00978.1| hypothetical protein [Arabidopsis thaliana]
gi|332004275|gb|AED91658.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 602
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 131/247 (53%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ M VKP +V+Y LI+ YC+ R+V+ A +++E+M+ ++ + + + II GLG G+
Sbjct: 276 MKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGR 335
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A +++ P YN+ ++N+C A L AS ++ M+ +G+ P TTYN
Sbjct: 336 LSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNH 395
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
FF+ F N NLY +++ G P+ + ++K+ K+ +A+Q+ +M +G
Sbjct: 396 FFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRG 455
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+L + +L LLC + L EA + F + +G P ++F+ I + + +
Sbjct: 456 IDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGLRSKGMSDMAK 515
Query: 241 NLSNKMA 247
LS+ M+
Sbjct: 516 RLSSLMS 522
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 110/238 (46%), Gaps = 1/238 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P + +N L++ + + R++++A K+ E+M+ ++ P V++Y ++I G + + A +V
Sbjct: 248 PSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEV 307
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L+EMK + +N I A RL +A G+M+ P TYN + F
Sbjct: 308 LEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCK 367
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ DL + + MM G P T + K + K E + L+ ++E G L
Sbjct: 368 AGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLT 427
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLSN 244
++ +LC+ GKL A + EM +G P ++ I L L +EA + N
Sbjct: 428 YHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDN 485
>gi|115476116|ref|NP_001061654.1| Os08g0369200 [Oryza sativa Japonica Group]
gi|113623623|dbj|BAF23568.1| Os08g0369200 [Oryza sativa Japonica Group]
gi|125603197|gb|EAZ42522.1| hypothetical protein OsJ_27088 [Oryza sativa Japonica Group]
gi|215740653|dbj|BAG97309.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 511
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 119/234 (50%), Gaps = 12/234 (5%)
Query: 5 GVKPDIVSYNCLIDVYCK----------DRQVEKAYKIVEKMRDEDISPDVISYTSIIGG 54
G++P+IV+YN L++ C+ DR V A ++++M I P+V SY+ I+
Sbjct: 237 GIEPNIVTYNILLNGICRHASLHPDYRFDRTVRAAEDLLKEMHQRGIEPNVTSYSVILHV 296
Query: 55 LGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPN 114
+P+ + + MKE G P A Y + I+ RL DA L+DEM +G+ P+
Sbjct: 297 YSRAHKPELCLCMFRSMKERGICPTVATYTSVIKCLASCGRLDDAESLLDEMASEGVCPS 356
Query: 115 ATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG--CLPNTQSCMFLVKLCKRQEKVEIALQL 172
TYN FF+ + D+ + LY +M G P+ + L+ + + + + +Q+
Sbjct: 357 PATYNCFFKEYRGRKDVNGALQLYNKMKAPGSPATPDIHTYNILLGMFIKLNQHDTVMQV 416
Query: 173 WNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
WNDM E G + +L LCD K EA + F+EMIE+G P +++F +
Sbjct: 417 WNDMCESTVGPDLNSYTLLVHGLCDNKKWREACQFFMEMIERGFLPQKITFETL 470
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 103/268 (38%), Gaps = 48/268 (17%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
+G +PD + L+D CK + + A ++ K R P+ YT +I G V + D
Sbjct: 167 VGREPDAAEFTTLLDTLCKYKYPKVAAEVFNK-RKYKYEPNEKMYTVLIYGWCKVNRNDM 225
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYC----------IAKRLRDASGLMDEMVEKGLSP 113
A+ LK+M +G P+ YN + C + +R A L+ EM ++G+ P
Sbjct: 226 AQKFLKDMIYHGIEPNIVTYNILLNGICRHASLHPDYRFDRTVRAAEDLLKEMHQRGIEP 285
Query: 114 NATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLW 173
N T+Y++ V+ R K E+ L ++
Sbjct: 286 NVTSYSVILHVY-----------------------------------SRAHKPELCLCMF 310
Query: 174 NDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMEL 232
M E+G + + L G+L +AE EM +G PS ++ K
Sbjct: 311 RSMKERGICPTVATYTSVIKCLASCGRLDDAESLLDEMASEGVCPSPATYNCFFKEYRGR 370
Query: 233 ANKQEALQNLSNKMALFGPSMIPKREEY 260
+ ALQ L NKM G P Y
Sbjct: 371 KDVNGALQ-LYNKMKAPGSPATPDIHTY 397
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 60/135 (44%), Gaps = 2/135 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMR--DEDISPDVISYTSIIGGLGLV 58
M GV P +YNC Y + V A ++ KM+ +PD+ +Y ++G +
Sbjct: 348 MASEGVCPSPATYNCFFKEYRGRKDVNGALQLYNKMKAPGSPATPDIHTYNILLGMFIKL 407
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
Q D V +M E PD +Y + C K+ R+A EM+E+G P T+
Sbjct: 408 NQHDTVMQVWNDMCESTVGPDLNSYTLLVHGLCDNKKWREACQFFMEMIERGFLPQKITF 467
Query: 119 NLFFRVFYWSNDLRS 133
+R ++ LR+
Sbjct: 468 ETLYRGLIQADMLRT 482
>gi|297807171|ref|XP_002871469.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317306|gb|EFH47728.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 602
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 130/245 (53%), Gaps = 6/245 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ M VKP +V+Y LI+ YC+ R+VE A +I+E+M+ ++ + + II GLG G+
Sbjct: 276 MKAMNVKPTVVTYGTLIEGYCRMRRVEIAMEILEEMKMAEMELTFMVFNPIIDGLGEAGR 335
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A +++ P YN+ ++N+C A L AS ++ M+ +G+ P +TYN
Sbjct: 336 LSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVEPTTSTYNH 395
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
FF+ F N NLY +++ G P+ + ++K+ K+ +A+Q+ +M +G
Sbjct: 396 FFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAIQVNKEMKNRG 455
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR------RIKALMELAN 234
+L + +L LLC + L EA + F + +G P ++F+ R K + ++A
Sbjct: 456 IDPDLLTTTMLMHLLCRLDMLEEAFEEFDNAVRRGIIPQYITFKMIDNGLRSKGMTDMAK 515
Query: 235 KQEAL 239
+ +L
Sbjct: 516 RLSSL 520
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 89/208 (42%), Gaps = 22/208 (10%)
Query: 13 YNCLIDVYCKDRQVEKAYKIV-EKMRDEDISPDVISYTSII-----GGLGLVGQPDKARD 66
++ +I+ CK R+ E A+ +V +++R ++ S V + T I+ G+V Q +A +
Sbjct: 138 FDSVINSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQAIRAFE 197
Query: 67 VLK----------EMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNAT 116
+ E+K DA +R + L G+MD P+
Sbjct: 198 FARSYEPVCKSASELKLLEVLLDALCKEGYVREASVY--LERRRGMMD----SNWVPSVR 251
Query: 117 TYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDM 176
+N+ ++ S L+ + L+ M P + L++ R +VEIA+++ +M
Sbjct: 252 IFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVEIAMEILEEM 311
Query: 177 VEKGFGSYILVSDVLFDLLCDMGKLVEA 204
+V + + D L + G+L EA
Sbjct: 312 KMAEMELTFMVFNPIIDGLGEAGRLSEA 339
>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 554
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 133/250 (53%), Gaps = 4/250 (1%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD+V+Y L++ CK ++A K++++MRD+ +PD+++Y ++ G+ G+ D A +
Sbjct: 191 PDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEF 250
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
LK + YGC P+ +YN ++ C A+R DA LM EM +KG PN T+N+
Sbjct: 251 LKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCR 310
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ + + ++ GC PN+ S L+ +Q+K++ A+ + MV +G I+
Sbjct: 311 KGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVS 370
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLSNKM 246
+ L LC G++ A + ++ +KG P +S+ I L + +EAL+ L N+M
Sbjct: 371 YNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALE-LLNEM 429
Query: 247 ALFG--PSMI 254
G P +I
Sbjct: 430 VSKGLQPDII 439
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 116/228 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G PDIV+YN +++ C++ +V+ A + ++ + P+ +SY ++ GL +
Sbjct: 219 MRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAER 278
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A +++ EM + GC P+ +N I C + A +++++ + G +PN+ +YN
Sbjct: 279 WEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNP 338
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + + M+ GC P+ S L+ R +V++A++L + + +KG
Sbjct: 339 LLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKG 398
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKA 228
++ + + D L GK EA + EM+ KG +P +++ I A
Sbjct: 399 CAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAA 446
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 126/256 (49%), Gaps = 2/256 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G +P+ VSYN ++ C + E A +++ +M + P+V+++ +I L G + A
Sbjct: 258 GCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPA 317
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+VL+++ +YGC P++ +YN + +C K++ A +D MV +G P+ +YN
Sbjct: 318 LEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTA 377
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
S ++ + L ++ GC P S ++ + K + AL+L N+MV KG
Sbjct: 378 LCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPD 437
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSN 244
I+ + LC ++ +A ++F ++ + G +P+ V + I ++ L ++E +
Sbjct: 438 IITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAI--ILGLCKRRETHSAIDL 495
Query: 245 KMALFGPSMIPKREEY 260
+ G +P Y
Sbjct: 496 FAYMIGNGCMPNESTY 511
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 104/217 (47%), Gaps = 5/217 (2%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD+++YN ++ YC Q++ A ++V +M + PD +Y ++I GL G+ A V
Sbjct: 124 PDVMAYNAMVAGYCGAGQLDAARRLVAEM---PVEPDAYTYNTLIRGLCGRGRTANALAV 180
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L EM C PD Y + C + A L+DEM +KG +P+ TYN+
Sbjct: 181 LDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQ 240
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ + + GC PNT S ++K E+ E A +L +M +KG ++
Sbjct: 241 EGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVT 300
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEK-GHKPSQVSF 223
++L LC G LVE LE I K G P+ +S+
Sbjct: 301 FNMLISFLCRKG-LVEPALEVLEQIPKYGCTPNSLSY 336
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 97/195 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PDIVSYN L+ C+ +V+ A +++ +++D+ +P +ISY ++I GL G+
Sbjct: 359 MVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGK 418
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++L EM G PD Y+ C R+ DA ++ + G+ PN YN
Sbjct: 419 TKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNA 478
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ S+ +L+ M+G GC+PN + L++ + ++ A L +++ +G
Sbjct: 479 IILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRG 538
Query: 181 FGSYILVSDVLFDLL 195
L++ LL
Sbjct: 539 VVRKSLINKGAIRLL 553
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 105/226 (46%), Gaps = 3/226 (1%)
Query: 1 MREMGVK---PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGL 57
M EMG K P++V++N LI C+ VE A +++E++ +P+ +SY ++
Sbjct: 286 MGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCK 345
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
+ DKA L M GCYPD +YN + C + + A L+ ++ +KG +P +
Sbjct: 346 QKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLIS 405
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
YN + + + L M+ G P+ + + R++++E A++ + +
Sbjct: 406 YNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQ 465
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ G ++ + + LC + A F MI G P++ ++
Sbjct: 466 DMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTY 511
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 98/217 (45%), Gaps = 8/217 (3%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
+PD + LI + +A +++ PDV++Y +++ G GQ D AR
Sbjct: 93 RPDAGTCAALIKKLSASGRTAEARRVLAA-----CGPDVMAYNAMVAGYCGAGQLDAARR 147
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
++ EM PDA YN IR C R +A ++DEM+ + P+ TY +
Sbjct: 148 LVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATC 204
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+ + + L M GC P+ + +V ++ +V+ A++ ++ G +
Sbjct: 205 KRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTV 264
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+++ LC + +AE+ EM +KG P+ V+F
Sbjct: 265 SYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTF 301
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 107/226 (47%), Gaps = 12/226 (5%)
Query: 25 QVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYN 84
++++A ++V R PD + ++I L G+ +AR VL C PD AYN
Sbjct: 80 ELDEALRLVGSAR----RPDAGTCAALIKKLSASGRTAEARRVLA-----ACGPDVMAYN 130
Query: 85 AAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGT 144
A + YC A +L A L+ EM + P+A TYN R ++ + M+
Sbjct: 131 AMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRR 187
Query: 145 GCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEA 204
C+P+ + L++ ++ + A++L ++M +KG I+ +V+ + +C G++ +A
Sbjct: 188 RCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDA 247
Query: 205 EKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFG 250
+ + G +P+ VS+ + + A + E + L +M G
Sbjct: 248 IEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKG 293
>gi|357134934|ref|XP_003569069.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Brachypodium distachyon]
Length = 642
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 113/204 (55%), Gaps = 5/204 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ GV+P++ +YN LI C++ +V A +++++M + PD +S+T+II L + +
Sbjct: 153 MRKAGVEPNVYTYNLLIKALCQNDRVGAARRMLDEMARKGCRPDEVSHTTIISALCKLDR 212
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+AR +L EM P A+YNA + C R+R+ ++DEMV +GL P+ Y
Sbjct: 213 LDEARGILAEMT-----PVGASYNAVVHALCGQFRMREVFLVVDEMVHRGLRPDTVAYTS 267
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + +LR + + RM+ GC+PN Q+ LVK KV AL +WN MV +G
Sbjct: 268 IVGAFCKARELRMACAILARMVTEGCVPNVQTFTVLVKGFFDDGKVHDALGMWNWMVAEG 327
Query: 181 FGSYILVSDVLFDLLCDMGKLVEA 204
+ + +VL LC +G L A
Sbjct: 328 WAPSTISYNVLIRGLCHIGDLKRA 351
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 121/246 (49%), Gaps = 2/246 (0%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ P SYN ++ C ++ + + +V++M + PD ++YTSI+G + A
Sbjct: 223 MTPVGASYNAVVHALCGQFRMREVFLVVDEMVHRGLRPDTVAYTSIVGAFCKARELRMAC 282
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+L M GC P+ + ++ + ++ DA G+ + MV +G +P+ +YN+ R
Sbjct: 283 AILARMVTEGCVPNVQTFTVLVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGL 342
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
DL+ + ++ M + CLP+ ++ L+ + +++A+ +WNDM G +
Sbjct: 343 CHIGDLKRALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNV 402
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLSN 244
+V + D+LC +AE +M + P+ ++F I++L +L AL N+ +
Sbjct: 403 VVYTNMVDVLCKKVMFDQAENLIDKMSLENCPPNTLTFNTLIRSLCDLGRAGRAL-NVFH 461
Query: 245 KMALFG 250
M +G
Sbjct: 462 GMRRYG 467
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 95/222 (42%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G P +SYN LI C +++A + M D PDV +Y+++I G G D A
Sbjct: 327 GWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGDLDVA 386
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ +M GC P+ Y + C A L+D+M + PN T+N R
Sbjct: 387 MSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLENCPPNTLTFNTLIRS 446
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ N++ M GC PN ++ L+ R+ E AL++ +M+ GF
Sbjct: 447 LCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLHGLFREGNCEDALRMLTEMLNHGFELS 506
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ + LC M + EA MI +G +P +F I
Sbjct: 507 LVSYNTTISGLCQMRMIKEAMILLGRMIIQGIQPDAFTFNAI 548
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 107/244 (43%), Gaps = 1/244 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G++PD V+Y ++ +CK R++ A I+ +M E P+V ++T ++ G G+
Sbjct: 253 MVHRGLRPDTVAYTSIVGAFCKARELRMACAILARMVTEGCVPNVQTFTVLVKGFFDDGK 312
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A + M G P +YN IR C L+ A + M + P+ TY+
Sbjct: 313 VHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYST 372
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + DL + +++ M GC PN +V + ++ + A L + M +
Sbjct: 373 LIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLEN 432
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
L + L LCD+G+ A F M G P+ ++ + L N ++AL
Sbjct: 433 CPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLHGLFREGNCEDAL 492
Query: 240 QNLS 243
+ L+
Sbjct: 493 RMLT 496
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 101/223 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G KP++V Y ++DV CK ++A +++KM E+ P+ +++ ++I L +G+
Sbjct: 393 MTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLENCPPNTLTFNTLIRSLCDLGR 452
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A +V M+ YGC P+ YN + DA ++ EM+ G + +YN
Sbjct: 453 AGRALNVFHGMRRYGCPPNDRTYNELLHGLFREGNCEDALRMLTEMLNHGFELSLVSYNT 512
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++ + L RM+ G P+ + ++ ++ V A + M
Sbjct: 513 TISGLCQMRMIKEAMILLGRMIIQGIQPDAFTFNAIIHAYCKEGNVRAAAWMLGRMDAVN 572
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I+ L LC KL +A L+M+ +G P++ ++
Sbjct: 573 CPRNIVAYTSLMSGLCSQHKLDDAMVYLLKMLYEGICPNEATW 615
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 60/126 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G + +VSYN I C+ R +++A ++ +M + I PD ++ +II G
Sbjct: 498 MLNHGFELSLVSYNTTISGLCQMRMIKEAMILLGRMIIQGIQPDAFTFNAIIHAYCKEGN 557
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +L M C + AY + + C +L DA + +M+ +G+ PN T+N+
Sbjct: 558 VRAAAWMLGRMDAVNCPRNIVAYTSLMSGLCSQHKLDDAMVYLLKMLYEGICPNEATWNV 617
Query: 121 FFRVFY 126
R +
Sbjct: 618 LVRGIF 623
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 66/158 (41%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G P+ +YN L+ ++ E A +++ +M + ++SY + I GL +
Sbjct: 463 MRRYGCPPNDRTYNELLHGLFREGNCEDALRMLTEMLNHGFELSLVSYNTTISGLCQMRM 522
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A +L M G PDA +NA I YC +R A+ ++ M N Y
Sbjct: 523 IKEAMILLGRMIIQGIQPDAFTFNAIIHAYCKEGNVRAAAWMLGRMDAVNCPRNIVAYTS 582
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK 158
+ L + +M+ G PN + LV+
Sbjct: 583 LMSGLCSQHKLDDAMVYLLKMLYEGICPNEATWNVLVR 620
>gi|115455297|ref|NP_001051249.1| Os03g0746400 [Oryza sativa Japonica Group]
gi|113549720|dbj|BAF13163.1| Os03g0746400, partial [Oryza sativa Japonica Group]
Length = 613
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 123/242 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G P +V+Y L++ YC ++ + Y ++++MR P+V++YT ++ LG G+
Sbjct: 355 MKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNVVTYTILMHALGKAGR 414
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A D ++KE G PDA+ YN+ I A RL DA +++EM G++PN TT+N
Sbjct: 415 TREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEMRTTGIAPNVTTFNT 474
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ L +M C P+ ++ L+KLC +++ V+I L L M K
Sbjct: 475 LISAACDHSQAENALKLLVKMEEQSCNPDIKTYTPLLKLCCKRQWVKILLFLVCHMFRKD 534
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+L LC GK+ ++ EM+ KG P Q +F + +E N Q +
Sbjct: 535 ISPDFSTYTLLVSWLCRNGKVAQSCLFLEEMVSKGFAPKQETFDLVMEKLEKRNLQSVYK 594
Query: 241 NL 242
+
Sbjct: 595 KI 596
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 99/218 (45%), Gaps = 1/218 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV D + N L+D CK+R V++A + +++R I PD S+ +++ G
Sbjct: 286 MDRFGVVKDTKAMNVLLDTLCKERSVKRARGVFQELRGT-IPPDENSFNTLVHGWCKARM 344
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A D ++EMK++G P Y + + YC+ K + L+DEM ++ PN TY +
Sbjct: 345 LKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNVVTYTI 404
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ R + + + ++ G P+ L+ + R ++E A + +M G
Sbjct: 405 LMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEMRTTG 464
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
+ + L CD + A K ++M E+ P
Sbjct: 465 IAPNVTTFNTLISAACDHSQAENALKLLVKMEEQSCNP 502
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/266 (19%), Positives = 104/266 (39%), Gaps = 35/266 (13%)
Query: 12 SYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEM 71
SY+ ++D+ K +Q + + ++ +M + +++ T ++ L + +A D +M
Sbjct: 227 SYDLMVDILGKFKQFDLMWGLINQMVEVGGLMSLMTMTKVMRRLAGASRWTEAIDAFHKM 286
Query: 72 KEYGCY----------------------------------PDAAAYNAAIRNYCIAKRLR 97
+G PD ++N + +C A+ L+
Sbjct: 287 DRFGVVKDTKAMNVLLDTLCKERSVKRARGVFQELRGTIPPDENSFNTLVHGWCKARMLK 346
Query: 98 DASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV 157
+A M+EM + G SP+ TY + D ++ + L M C PN + L+
Sbjct: 347 EALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNVVTYTILM 406
Query: 158 KLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHK 217
+ + AL ++ + E G + L +L G+L +A EM G
Sbjct: 407 HALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEMRTTGIA 466
Query: 218 PSQVSFRR-IKALMELANKQEALQNL 242
P+ +F I A + + + AL+ L
Sbjct: 467 PNVTTFNTLISAACDHSQAENALKLL 492
>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 584
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 122/226 (53%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E GV P++ +YNC+++ CKD + + A+K+ ++MR+ +S ++++Y ++IGGL +
Sbjct: 259 MQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMK 318
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A +V+ +MK G P+ YN I +C ++L A L ++ +GLSP+ TYN+
Sbjct: 319 ANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNI 378
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F D + + M G P+ + L+ R + +E A+QL + M E G
Sbjct: 379 LVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELG 438
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ VL C G++ EA + F M+EK +P++V + +
Sbjct: 439 LTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTM 484
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 126/254 (49%), Gaps = 2/254 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MRE GV +IV+YN LI C++ + +A +++++M+ + I+P++I+Y ++I G V +
Sbjct: 294 MRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRK 353
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA + +++K G P YN + +C A ++ EM E+G+ P+ TY +
Sbjct: 354 LGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTI 413
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F S+++ + L M G P+ + L+ + ++ A +L+ MVEK
Sbjct: 414 LIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKK 473
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
F ++ + + C G A + F EM EK P+ S+R + ++ K + +
Sbjct: 474 FEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAE 533
Query: 241 NLSNKM--ALFGPS 252
L KM + GPS
Sbjct: 534 GLVEKMIDSGIGPS 547
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 113/241 (46%), Gaps = 1/241 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+RE G P++V Y LID CK ++EKA + +M + + +YT +I GL G
Sbjct: 189 LREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGI 248
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ ++ ++M+E+G +P+ YN + C R +DA + DEM E+G+S N TYN
Sbjct: 249 KKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNT 308
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + +M G PN + L+ K+ AL L D+ +G
Sbjct: 309 LIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRG 368
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEAL 239
++ ++L C G A K EM E+G KPS+V++ I N ++A+
Sbjct: 369 LSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAI 428
Query: 240 Q 240
Q
Sbjct: 429 Q 429
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 89/185 (48%), Gaps = 4/185 (2%)
Query: 44 DVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLM 103
DV S+ +I G G+ +K+ D+L E++E+G P+ Y I C + A L
Sbjct: 162 DVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221
Query: 104 DEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPN--TQSCMFLVKLCK 161
EM + GL N TY + + + + + +Y +M G PN T +C+ + +LCK
Sbjct: 222 FEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCV-MNQLCK 280
Query: 162 RQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQV 221
+ + A +++++M E+G I+ + L LC K EA + +M G P+ +
Sbjct: 281 -DGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLI 339
Query: 222 SFRRI 226
++ +
Sbjct: 340 TYNTL 344
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 70/123 (56%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E+G+ PD+ +Y+ LI +C ++ +A ++ + M ++ P+ + Y +++ G G
Sbjct: 434 MEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGS 493
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + +EM+E P+ A+Y I C ++ ++A GL+++M++ G+ P+ + NL
Sbjct: 494 SYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDSGIGPSDSILNL 553
Query: 121 FFR 123
R
Sbjct: 554 ISR 556
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 54/129 (41%), Gaps = 1/129 (0%)
Query: 83 YNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMM 142
Y I Y ++ L + +EMV+KG P + +N S+ W +
Sbjct: 97 YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESK 156
Query: 143 GTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLV 202
L + S ++K C ++E + L ++ E GF +++ L D C G++
Sbjct: 157 IKVVL-DVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIE 215
Query: 203 EAEKSFLEM 211
+A+ F EM
Sbjct: 216 KAKDLFFEM 224
>gi|108711050|gb|ABF98845.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215693326|dbj|BAG88708.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625789|gb|EEE59921.1| hypothetical protein OsJ_12549 [Oryza sativa Japonica Group]
Length = 554
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 123/242 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G P +V+Y L++ YC ++ + Y ++++MR P+V++YT ++ LG G+
Sbjct: 296 MKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNVVTYTILMHALGKAGR 355
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A D ++KE G PDA+ YN+ I A RL DA +++EM G++PN TT+N
Sbjct: 356 TREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEMRTTGIAPNVTTFNT 415
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ L +M C P+ ++ L+KLC +++ V+I L L M K
Sbjct: 416 LISAACDHSQAENALKLLVKMEEQSCNPDIKTYTPLLKLCCKRQWVKILLFLVCHMFRKD 475
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+L LC GK+ ++ EM+ KG P Q +F + +E N Q +
Sbjct: 476 ISPDFSTYTLLVSWLCRNGKVAQSCLFLEEMVSKGFAPKQETFDLVMEKLEKRNLQSVYK 535
Query: 241 NL 242
+
Sbjct: 536 KI 537
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 99/218 (45%), Gaps = 1/218 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV D + N L+D CK+R V++A + +++R I PD S+ +++ G
Sbjct: 227 MDRFGVVKDTKAMNVLLDTLCKERSVKRARGVFQELRGT-IPPDENSFNTLVHGWCKARM 285
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A D ++EMK++G P Y + + YC+ K + L+DEM ++ PN TY +
Sbjct: 286 LKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNVVTYTI 345
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ R + + + ++ G P+ L+ + R ++E A + +M G
Sbjct: 346 LMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEMRTTG 405
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
+ + L CD + A K ++M E+ P
Sbjct: 406 IAPNVTTFNTLISAACDHSQAENALKLLVKMEEQSCNP 443
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/266 (19%), Positives = 104/266 (39%), Gaps = 35/266 (13%)
Query: 12 SYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEM 71
SY+ ++D+ K +Q + + ++ +M + +++ T ++ L + +A D +M
Sbjct: 168 SYDLMVDILGKFKQFDLMWGLINQMVEVGGLMSLMTMTKVMRRLAGASRWTEAIDAFHKM 227
Query: 72 KEYGCY----------------------------------PDAAAYNAAIRNYCIAKRLR 97
+G PD ++N + +C A+ L+
Sbjct: 228 DRFGVVKDTKAMNVLLDTLCKERSVKRARGVFQELRGTIPPDENSFNTLVHGWCKARMLK 287
Query: 98 DASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV 157
+A M+EM + G SP+ TY + D ++ + L M C PN + L+
Sbjct: 288 EALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNVVTYTILM 347
Query: 158 KLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHK 217
+ + AL ++ + E G + L +L G+L +A EM G
Sbjct: 348 HALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEMRTTGIA 407
Query: 218 PSQVSFRR-IKALMELANKQEALQNL 242
P+ +F I A + + + AL+ L
Sbjct: 408 PNVTTFNTLISAACDHSQAENALKLL 433
>gi|413934704|gb|AFW69255.1| hypothetical protein ZEAMMB73_056731 [Zea mays]
Length = 485
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 128/243 (52%), Gaps = 1/243 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDE-DISPDVISYTSIIGGLGLVGQPDK 63
G D VSY +D YCK + A +++++MR + D P + +T++I G G+V +
Sbjct: 228 GFVADAVSYCIRMDAYCKKGRFLDALELLDEMRSKGDYKPTLQVFTTLIYGAGIVRNAAR 287
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
AR + EM+++G PD A+NA + Y + L+ A +M +M KG+ + +YN
Sbjct: 288 ARALFDEMEKWGVTPDRGAHNALMGVYVRVRDLQSAMAVMSDMERKGIGLDDVSYNTMLC 347
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
F DL W +Y +M+ +G +P T++ M L+K+ + ++ L+LW+ ++ +G
Sbjct: 348 GFQRVGDLEGIWKVYSKMVSSGFMPRTRTTMLLMKVFCENGRPDLGLELWDYLMGRGCVP 407
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLS 243
+ D+L LC G + EA + F E+IE G P++ +F ++ + + ++ +
Sbjct: 408 HQHALDILVTGLCCRGVVAEAYRCFREIIETGMAPTERAFTVLEGFLRRKREHGKVEEIR 467
Query: 244 NKM 246
M
Sbjct: 468 QMM 470
>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
Length = 584
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 133/250 (53%), Gaps = 4/250 (1%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD+V+Y L++ CK ++A K++++MRD+ +PD+++Y ++ G+ G+ D A +
Sbjct: 193 PDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEF 252
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
LK + YGC P+ +YN ++ C A+R DA LM EM +KG PN T+N+
Sbjct: 253 LKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCR 312
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ + + ++ GC PN+ S L+ +Q+K++ A+ + MV +G I+
Sbjct: 313 KGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVS 372
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLSNKM 246
+ L LC G++ A + ++ +KG P +S+ I L + +EAL+ L N+M
Sbjct: 373 YNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALE-LLNEM 431
Query: 247 ALFG--PSMI 254
G P +I
Sbjct: 432 VSKGLQPDII 441
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 116/228 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G PDIV+YN +++ C++ +V+ A + ++ + P+ +SY ++ GL +
Sbjct: 221 MRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAER 280
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A +++ EM + GC P+ +N I C + A +++++ + G SPN+ +YN
Sbjct: 281 WEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNP 340
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + + M+ GC P+ S L+ R +V++A++L + + +KG
Sbjct: 341 LLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKG 400
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKA 228
++ + + D L GK EA + EM+ KG +P +++ I A
Sbjct: 401 CAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAA 448
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 126/256 (49%), Gaps = 2/256 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G +P+ VSYN ++ C + E A +++ +M + P+V+++ +I L G + A
Sbjct: 260 GCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPA 319
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+VL+++ +YGC P++ +YN + +C K++ A +D MV +G P+ +YN
Sbjct: 320 LEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTA 379
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
S ++ + L ++ GC P S ++ + K + AL+L N+MV KG
Sbjct: 380 LCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPD 439
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSN 244
I+ + LC ++ +A ++F ++ + G +P+ V + I ++ L ++E +
Sbjct: 440 IITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAI--ILGLCKRRETHSAIDL 497
Query: 245 KMALFGPSMIPKREEY 260
+ G +P Y
Sbjct: 498 FAYMIGNGCMPNESTY 513
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 92/180 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PDIVSYN L+ C+ +V+ A +++ +++D+ +P +ISY ++I GL G+
Sbjct: 361 MVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGK 420
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++L EM G PD Y+ C R+ DA ++ + G+ PN YN
Sbjct: 421 TKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNA 480
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ S+ +L+ M+G GC+PN + L++ + ++ A L +++ +G
Sbjct: 481 IILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRG 540
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 99/217 (45%), Gaps = 5/217 (2%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD+++YN ++ YC QV+ A + + + D + ++I GL G+ A V
Sbjct: 126 PDVMAYNAMMAGYCGAGQVDAARRWCA---ERAVERDAYTCDTLIRGLCGRGRTANALAV 182
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L EM C PD Y + C + A L+DEM +KG +P+ TYN+
Sbjct: 183 LDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQ 242
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ + + GC PNT S ++K E+ E A +L +M +KG ++
Sbjct: 243 EGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVT 302
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEK-GHKPSQVSF 223
++L LC G LVE LE I K G P+ +S+
Sbjct: 303 FNMLISFLCRKG-LVEPALEVLEQIPKYGCSPNSLSY 338
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 103/223 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G P++V++N LI C+ VE A +++E++ SP+ +SY ++ +
Sbjct: 291 MGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKK 350
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA L M GCYPD +YN + C + + A L+ ++ +KG +P +YN
Sbjct: 351 MDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNT 410
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + L M+ G P+ + + R++++E A++ + + + G
Sbjct: 411 VIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMG 470
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + + LC + A F MI G P++ ++
Sbjct: 471 IRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTY 513
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 103/226 (45%), Gaps = 12/226 (5%)
Query: 25 QVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYN 84
++++A ++V R PD + ++I L G+ +AR VL C PD AYN
Sbjct: 82 ELDEALRLVGSAR----RPDAGTCAALIKKLSASGRTAEARRVLA-----ACGPDVMAYN 132
Query: 85 AAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGT 144
A + YC A ++ A E+ + +A T + R ++ + M+
Sbjct: 133 AMMAGYCGAGQVDAAR---RWCAERAVERDAYTCDTLIRGLCGRGRTANALAVLDEMLRR 189
Query: 145 GCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEA 204
C+P+ + L++ ++ + A++L ++M +KG I+ +V+ + +C G++ +A
Sbjct: 190 RCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDA 249
Query: 205 EKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFG 250
+ + G +P+ VS+ + + A + E + L +M G
Sbjct: 250 IEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKG 295
>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
Length = 707
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 116/231 (50%), Gaps = 3/231 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E V PD+ +YN LID CK + +KA +++ +M D ++PD +++ SI+ GL G+
Sbjct: 1 MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A +L M E C P YN I C + + A L+DE V G P+ TY++
Sbjct: 61 FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSI 120
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ L M G GC PN + L+ + K E A +L +V G
Sbjct: 121 LADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSG 180
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALME 231
F ++ ++ D LC G+L +A K M+++G PS +++ ALME
Sbjct: 181 FVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITY---TALME 228
Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 108/209 (51%), Gaps = 3/209 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G P+I +YN ++D CK +V++A+ +E M PDV+SY II GL +P +A
Sbjct: 317 GCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEA 376
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
R VL +M + G PDA YN + +C +R DA G++ M++ G+ P+ TYN
Sbjct: 377 RQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISG 436
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPN--TQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
+N L ++ L M+ GC+ + T + +LCK + ++ AL L + M G
Sbjct: 437 LSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCK-EGCLKQALLLMDHMTGHGVE 495
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEM 211
+ + ++ D LC G+L EA EM
Sbjct: 496 ANTVTYNIFIDRLCKEGRLDEASSLLSEM 524
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 114/243 (46%), Gaps = 4/243 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P++V+YN LID CK + EKAY+++E + PDV++YT I+ GL G+
Sbjct: 141 MSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIVDGLCKEGR 200
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA +++ M + GC P Y A + C R+ +A + EMV K + +A Y
Sbjct: 201 LDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVS 260
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ S+ + + + + GT + + M CK EI ++ DM +G
Sbjct: 261 LVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMD--GYCKEGRLDEIP-NVFEDMACRG 317
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEAL 239
I +++ D LC GK+ EA M G P VS+ I L + + +EA
Sbjct: 318 CVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEAR 377
Query: 240 QNL 242
Q L
Sbjct: 378 QVL 380
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 107/217 (49%), Gaps = 7/217 (3%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PD+V+Y+ L D CK ++++A+++V++M +P++++Y ++I GL + +KA
Sbjct: 110 GFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKA 169
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++L+ + G PD Y + C RL A +++ M+++G +P+ TY
Sbjct: 170 YELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEG 229
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGS 183
+ + + +++ M+ C + + + LV CK E +V+ G+
Sbjct: 230 LCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKE-----AQKVVDGIRGT 284
Query: 184 -YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
YI V + L D C G+L E F +M +G P+
Sbjct: 285 PYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPN 321
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 122/284 (42%), Gaps = 34/284 (11%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD+VSYN +ID K + ++A +++++M I PD ++Y +++ +
Sbjct: 348 MHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEER 407
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNA-TTYN 119
D A +LK M + G PD YN I RL DA LM EM+ G +A TTYN
Sbjct: 408 FDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYN 467
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCK----------------- 161
L+ + L M G G NT + +F+ +LCK
Sbjct: 468 TIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTL 527
Query: 162 --------------RQEKVEIALQLWNDMVE-KGFGSYILVSDVLFDLLCDMGKLVEAEK 206
+ E+++ A +L +MV KG ++L D +L EA
Sbjct: 528 RDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALT 587
Query: 207 SFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFG 250
M+++G PS +++ + + +K + L ++MA+ G
Sbjct: 588 LLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRG 631
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 107/235 (45%), Gaps = 3/235 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G P +++Y L++ C+ +V++A+ I ++M +D + D ++Y S++ G +
Sbjct: 211 MLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSR 270
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A+ V+ ++ P YNA + YC RL + + ++M +G PN TYN+
Sbjct: 271 TKEAQKVVDGIRG---TPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNI 327
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ M GC+P+ S ++ + K + A Q+ + M++ G
Sbjct: 328 VMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAG 387
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANK 235
+ + L C + +A MI+ G P V++ + + + N+
Sbjct: 388 IPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNR 442
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 118/252 (46%), Gaps = 10/252 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+R V +YN +ID CK+ +++A +++ M + + ++Y I L G+
Sbjct: 454 LRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGR 513
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVE-KGLSPNATTYN 119
D+A +L EM D +Y I C A++L AS L EMV KGL + T+N
Sbjct: 514 LDEASSLLSEMDTL---RDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFN 570
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVE 178
L F + L + L M+ GC P+ + M + LCK +KV+ A +L+++M
Sbjct: 571 LLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCK-LDKVDKAWELFDEMAV 629
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIK-ALMELANKQE 237
+G + + VL LC G+ EA + EM + + R++ AL +E
Sbjct: 630 RGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKCRKLYLALRGQGRGEE 689
Query: 238 A---LQNLSNKM 246
A L+ ++ KM
Sbjct: 690 AAELLRRMTTKM 701
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 77/167 (46%)
Query: 71 MKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSND 130
M E PD YN I C A + AS ++ EMV++G++P+ T+N +
Sbjct: 1 MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60
Query: 131 LRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDV 190
+ +L M C P+ + L+ +Q+ V+ A L ++ V GF ++ +
Sbjct: 61 FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSI 120
Query: 191 LFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQE 237
L D LC G++ EA + EM G P+ V++ + + A+K E
Sbjct: 121 LADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTE 167
>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
Length = 1031
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 116/231 (50%), Gaps = 3/231 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E V PD+ +YN LID CK + +KA +++ +M D ++PD +++ SI+ GL G+
Sbjct: 252 MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 311
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A +L M E C P YN I C + + A L+DE V G P+ TY++
Sbjct: 312 FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSI 371
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ L M G GC PN + L+ + K E A +L +V G
Sbjct: 372 LADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSG 431
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALME 231
F ++ ++ D LC G+L +A K M+++G PS +++ ALME
Sbjct: 432 FVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITY---TALME 479
Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 108/209 (51%), Gaps = 3/209 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G P+I +YN ++D CK +V++A+ +E M PDV+SY II GL +P +A
Sbjct: 568 GCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEA 627
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
R VL +M + G PDA YN + +C +R DA G++ M++ G+ P+ TYN
Sbjct: 628 RQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISG 687
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPN--TQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
+N L ++ L M+ GC+ + T + +LCK + ++ AL L + M G
Sbjct: 688 LSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCK-EGCLKQALLLMDHMTGHGVE 746
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEM 211
+ + ++ D LC G+L EA EM
Sbjct: 747 ANTVTYNIFIDRLCKEGRLDEASSLLSEM 775
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 112/224 (50%), Gaps = 3/224 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PD+V+Y ++D CK+ +++KA K+VE M +P VI+YT+++ GL G+ D+A
Sbjct: 431 GFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEA 490
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ KEM C DA AY + + YC + R ++A ++D + +G +P YN
Sbjct: 491 HHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGI--RG-TPYIDVYNALMDG 547
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ L N++ M GC+PN ++ ++ + KV+ A M G
Sbjct: 548 YCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPD 607
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKA 228
++ +++ D L K EA + +MI+ G P V++ + A
Sbjct: 608 VVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMA 651
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 108/214 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV PD V++N ++D CK + E+A+ ++ M + + P +Y ++I GL
Sbjct: 287 MVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQN 346
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A+D++ E G PD Y+ C R+ +A L+ EM KG +PN TYN
Sbjct: 347 VDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNT 406
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++ ++ L ++ +G +P+ + +V ++ +++ AL++ M+++G
Sbjct: 407 LIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRG 466
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEK 214
++ L + LC G++ EA F EM+ K
Sbjct: 467 CTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSK 500
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 111/233 (47%), Gaps = 4/233 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G KP++ Y L +CK +++ A +I + SPD I+Y +II G D A
Sbjct: 190 GFKPEVSVYTILTRAFCKTGRLKDALEIFRNIP----SPDAIAYNAIIHGHCRKNDCDGA 245
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ LKEM E PD YN I C A + AS ++ EMV++G++P+ T+N
Sbjct: 246 LEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDG 305
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + +L M C P+ + L+ +Q+ V+ A L ++ V GF
Sbjct: 306 LCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPD 365
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQE 237
++ +L D LC G++ EA + EM KG P+ V++ + + A+K E
Sbjct: 366 VVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTE 418
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 114/243 (46%), Gaps = 4/243 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P++V+YN LID CK + EKAY+++E + PDV++YT I+ GL G+
Sbjct: 392 MSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGR 451
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA +++ M + GC P Y A + C R+ +A + EMV K + +A Y
Sbjct: 452 LDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVS 511
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ S+ + + + + GT + + M CK EI ++ DM +G
Sbjct: 512 LVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALM--DGYCKEGRLDEIP-NVFEDMACRG 568
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEAL 239
I +++ D LC GK+ EA M G P VS+ I L + + +EA
Sbjct: 569 CVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEAR 628
Query: 240 QNL 242
Q L
Sbjct: 629 QVL 631
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 119/277 (42%), Gaps = 35/277 (12%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ PD V+YN L+ +CK+ + + A I++ M + PD ++Y ++I GL +
Sbjct: 634 MIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNR 693
Query: 61 PDKARDVLKEMKEYGCYPDA-AAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
A +++ EM GC A YN I C L+ A LMD M G+ N TYN
Sbjct: 694 LGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYN 753
Query: 120 LFF-------------RVFYWSNDLRSSWNLYCRMMG--------------------TGC 146
+F + + LR + ++G G
Sbjct: 754 IFIDRLCKEGRLDEASSLLSEMDTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGL 813
Query: 147 LPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEK 206
+ + L+ + ++++ AL L MV++G ++ +++ LC + K+ +A +
Sbjct: 814 CITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWE 873
Query: 207 SFLEMIEKGHKPSQVSFR-RIKALMELANKQEALQNL 242
F EM +G S VS+ I L +EALQ L
Sbjct: 874 LFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVL 910
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 108/217 (49%), Gaps = 7/217 (3%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PD+V+Y+ L D CK ++++A+++V++M + +P++++Y ++I GL + +KA
Sbjct: 361 GFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKA 420
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++L+ + G PD Y + C RL A +++ M+++G +P+ TY
Sbjct: 421 YELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEG 480
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGS 183
+ + + +++ M+ C + + + LV CK E +V+ G+
Sbjct: 481 LCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEA-----QKVVDGIRGT 535
Query: 184 -YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
YI V + L D C G+L E F +M +G P+
Sbjct: 536 PYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPN 572
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 122/284 (42%), Gaps = 34/284 (11%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD+VSYN +ID K + ++A +++++M I PD ++Y +++ +
Sbjct: 599 MHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEER 658
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNA-TTYN 119
D A +LK M + G PD YN I RL DA LM EM+ G +A TTYN
Sbjct: 659 FDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYN 718
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCK----------------- 161
L+ + L M G G NT + +F+ +LCK
Sbjct: 719 TIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTL 778
Query: 162 --------------RQEKVEIALQLWNDMVE-KGFGSYILVSDVLFDLLCDMGKLVEAEK 206
+ E+++ A +L +MV KG ++L D +L EA
Sbjct: 779 RDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALT 838
Query: 207 SFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFG 250
M+++G PS +++ + + +K + L ++MA+ G
Sbjct: 839 LLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRG 882
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 102/213 (47%), Gaps = 6/213 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+R V +YN +ID CK+ +++A +++ M + + ++Y I L G+
Sbjct: 705 LRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGR 764
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVE-KGLSPNATTYN 119
D+A +L EM D +Y I C A++L AS L EMV KGL + T+N
Sbjct: 765 LDEASSLLSEMDTL---RDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFN 821
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVE 178
L F + L + L M+ GC P+ + M + LCK +KV+ A +L+++M
Sbjct: 822 LLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCK-LDKVDKAWELFDEMAV 880
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEM 211
+G + + VL LC G+ EA + EM
Sbjct: 881 RGIVASSVSYTVLIYGLCGQGRGKEALQVLEEM 913
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 93/222 (41%), Gaps = 4/222 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G K + NC + ++ ++ + E+M D +PD +Y +I L + Q DKA
Sbjct: 120 GFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKA 179
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+L + K G P+ + Y R +C RL+DA E+ SP+A YN
Sbjct: 180 FTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDAL----EIFRNIPSPDAIAYNAIIHG 235
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
ND + M P+ + L+ + K + A ++ ++MV++G
Sbjct: 236 HCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPD 295
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + + D LC GK A M E+ +PS ++ +
Sbjct: 296 TVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTL 337
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/247 (19%), Positives = 108/247 (43%), Gaps = 32/247 (12%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGL----- 55
M + G P +++Y L++ C+ +V++A+ I ++M +D + D ++Y S++ G
Sbjct: 462 MLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSR 521
Query: 56 ---------GLVGQP------------------DKARDVLKEMKEYGCYPDAAAYNAAIR 88
G+ G P D+ +V ++M GC P+ YN +
Sbjct: 522 TKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMD 581
Query: 89 NYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLP 148
C ++ +A ++ M G P+ +YN+ + ++ + + + +M+ G P
Sbjct: 582 GLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPP 641
Query: 149 NTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSF 208
+ + L+ ++E+ + A+ + +M++ G + + L L +L +A +
Sbjct: 642 DAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELM 701
Query: 209 LEMIEKG 215
EM+ G
Sbjct: 702 HEMLRNG 708
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G P +++YN +I CK +V+KA+++ ++M I +SYT +I GL G+
Sbjct: 843 MVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGR 902
Query: 61 PDKARDVLKEMKEYGCYPD 79
+A VL+EM C D
Sbjct: 903 GKEALQVLEEMASSDCEID 921
>gi|242062936|ref|XP_002452757.1| hypothetical protein SORBIDRAFT_04g031880 [Sorghum bicolor]
gi|241932588|gb|EES05733.1| hypothetical protein SORBIDRAFT_04g031880 [Sorghum bicolor]
Length = 502
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 122/247 (49%), Gaps = 11/247 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMR-----DEDISPDVISYTSIIGGL 55
M E G+ P +YN ++ + + Q++ A+ +M+ DE+ PDV+SYT+++ GL
Sbjct: 236 MVESGIAPTKTTYNIILKGFFRSGQLQHAWDFFLQMKKRGSNDENCKPDVVSYTTVLHGL 295
Query: 56 GLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNA 115
G+ GQ DKAR V EM GC P A YNA I+ C + DA + D+M+ KG PN
Sbjct: 296 GVAGQLDKARKVFDEMSREGCTPSIATYNALIQVTCKKGNVEDAVAVFDDMIRKGYIPNV 355
Query: 116 TTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWND 175
TY + R + + + L +M GC PN Q+ L+ + +E AL L+
Sbjct: 356 VTYTVLIRGLCHAGKIDRAMKLLDKMKREGCEPNVQTYNVLIGYLFEEGDIEKALHLFET 415
Query: 176 MVE-----KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALM 230
M + +Y ++ +F + + A + +EM+++G+ P + F R+ +
Sbjct: 416 MSKGEECLPNQDTYNIIISAMF-VRKRAEDMAVAARMVVEMVDRGYLPRRFMFNRVLNGL 474
Query: 231 ELANKQE 237
L QE
Sbjct: 475 MLTGNQE 481
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 94/227 (41%), Gaps = 41/227 (18%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
R GV D+ +N L+D K R KA +V +
Sbjct: 168 RSHGVAQDLPLFNSLLDALVKSRHAGKAASLVRAL------------------------- 202
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
E PDA YN +C K A ++ +MVE G++P TTYN+
Sbjct: 203 -----------ERRFPPDAVTYNTLADGWCRVKDTSRALDILRQMVESGIAPTKTTYNII 251
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTG-----CLPNTQSCMFLVKLCKRQEKVEIALQLWNDM 176
+ F+ S L+ +W+ + +M G C P+ S ++ +++ A +++++M
Sbjct: 252 LKGFFRSGQLQHAWDFFLQMKKRGSNDENCKPDVVSYTTVLHGLGVAGQLDKARKVFDEM 311
Query: 177 VEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+G I + L + C G + +A F +MI KG+ P+ V++
Sbjct: 312 SREGCTPSIATYNALIQVTCKKGNVEDAVAVFDDMIRKGYIPNVVTY 358
>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
Length = 1380
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 122/222 (54%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PD+ ++N LID YCK +++ A ++VE+M + I+PD I+Y S++ GL G+ ++
Sbjct: 426 GYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEV 485
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ +EM GC+P+ YN I N+C + ++ +AS ++ +M ++GL P+A ++N
Sbjct: 486 NETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYG 545
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
F + DL ++ L+ ++ G + L+ + + +A +++++M+ KG +
Sbjct: 546 FCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRAD 605
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
VL D C + A +EMI+KG PS +F R+
Sbjct: 606 SYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRV 647
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 112/223 (50%), Gaps = 2/223 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PD V+Y LI+ C + VE+A ++ + + + I PD++ Y S++ GL L G A
Sbjct: 321 GFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHA 380
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
V+ EM E GC+PD YN I C + DA+ +M++ + KG P+ T+N
Sbjct: 381 LQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDG 440
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
+ L S+ L RM G P+T + L LCK + E+ + + +M+ KG
Sbjct: 441 YCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVN-ETFQEMILKGCHP 499
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ ++L + C K+ EA K ++M ++G P VSF +
Sbjct: 500 NPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTL 542
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 124/251 (49%), Gaps = 2/251 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD +YN +ID YCK V++A ++++ + PD ++Y S+I GL G
Sbjct: 282 MMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGD 341
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A ++ E + G PD YN+ ++ C+ + A +M+EM E+G P+ TYN+
Sbjct: 342 VERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNI 401
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
++ + + + G LP+ + L+ CKR K++ ALQL M E
Sbjct: 402 VINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRL-KLDSALQLVERMWEY 460
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
G + + + + LC GK+ E ++F EMI KG P+ +++ + +NK E
Sbjct: 461 GIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEA 520
Query: 240 QNLSNKMALFG 250
+ KM+ G
Sbjct: 521 SKVIVKMSQEG 531
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 116/255 (45%), Gaps = 2/255 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G PDI +YN +I+ CK + A ++ + PDV ++ ++I G +
Sbjct: 387 MAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLK 446
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A +++ M EYG PD YN+ + C A ++ + + EM+ KG PN TYN+
Sbjct: 447 LDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNI 506
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F SN + + + +M G P+ S L+ R +E A L+ + EKG
Sbjct: 507 LIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKG 566
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEAL 239
+ + + L + AEK F EM+ KGH+ ++R I + AN A
Sbjct: 567 YSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAY 626
Query: 240 QNLSNKMAL-FGPSM 253
+L + F PSM
Sbjct: 627 MHLVEMIKKGFIPSM 641
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 107/224 (47%), Gaps = 1/224 (0%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
+ G+ ++ +YN I C+ ++ +A ++V+ MR + PDV++Y ++I GL P
Sbjct: 215 QRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQ 273
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
+A L+ M GC PD YN I YC +++A+ L+ + V KG P+ TY
Sbjct: 274 EAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLI 333
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
D+ + L+ G P+ LVK Q + ALQ+ N+M E+G
Sbjct: 334 NGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCH 393
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
I +++ + LC MG + +A + I KG+ P +F +
Sbjct: 394 PDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTL 437
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 117/282 (41%), Gaps = 40/282 (14%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV PD+ ++ + +C + A +++ + ++Y +++ GL G
Sbjct: 112 MLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGLYAHGH 167
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
AR + +M +P+ AA+N + C + +A L+ +++++G+S N TYN+
Sbjct: 168 THDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNI 227
Query: 121 FFR-------------------------VFYWSNDLRS---------SWNLYCRMMGTGC 146
+ R V ++ +R + + RMM GC
Sbjct: 228 WIRGLCEAGRLPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGC 287
Query: 147 LPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEK 206
LP+ + ++ + V+ A +L D V KGF + L + LC G + A +
Sbjct: 288 LPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALE 347
Query: 207 SFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLSNKMA 247
F E KG KP V + +K L ALQ + N+MA
Sbjct: 348 LFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQ-VMNEMA 388
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 83/186 (44%), Gaps = 8/186 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ PD VS+N LI +C++ +E AY + +K+ ++ S ++ ++IG
Sbjct: 527 MSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLN 586
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A + EM G D+ Y I C + A + EM++KG P+ +T+
Sbjct: 587 MHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGR 646
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQ--LWNDMVE 178
++ + + + M+ G +P +V +K EIA L D+++
Sbjct: 647 VINSLTVNHRVFQAVGIIHIMVKIGVVPE------VVDTILNADKKEIAAPKILVEDLMK 700
Query: 179 KGFGSY 184
KG SY
Sbjct: 701 KGHISY 706
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 97/236 (41%), Gaps = 8/236 (3%)
Query: 13 YNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMK 72
Y I Y + ++ A E+M P +Y +I+ L D+A V M
Sbjct: 54 YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 113
Query: 73 EYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLR 132
G PD + +R++C+ R A L+ + +G A Y Y
Sbjct: 114 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGLYAHGHTH 169
Query: 133 SSWNLYCRMMGTGCLPNTQSC-MFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVL 191
+ L+ +M+ T PN + L LCKR + +E L L ++++G + ++
Sbjct: 170 DARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGL-LLGKVIQRGMSINLFTYNIW 228
Query: 192 FDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLSNKM 246
LC+ G+L EA + ++ + P V++ I+ L + + QEA+ L M
Sbjct: 229 IRGLCEAGRLPEAVR-LVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMM 283
>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
Length = 1393
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 122/222 (54%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PD+ ++N LID YCK +++ A ++VE+M + I+PD I+Y S++ GL G+ ++
Sbjct: 425 GYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEV 484
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ +EM GC+P+ YN I N+C + ++ +AS ++ +M ++GL P+A ++N
Sbjct: 485 NETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYG 544
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
F + DL ++ L+ ++ G + L+ + + +A +++++M+ KG +
Sbjct: 545 FCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRAD 604
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
VL D C + A +EMI+KG PS +F R+
Sbjct: 605 SYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRV 646
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 112/223 (50%), Gaps = 2/223 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PD V+Y LI+ C + VE+A ++ + + + I PD++ Y S++ GL L G A
Sbjct: 320 GFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHA 379
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
V+ EM E GC+PD YN I C + DA+ +M++ + KG P+ T+N
Sbjct: 380 LQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDG 439
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
+ L S+ L RM G P+T + L LCK + E+ + + +M+ KG
Sbjct: 440 YCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVN-ETFQEMILKGCHP 498
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ ++L + C K+ EA K ++M ++G P VSF +
Sbjct: 499 NPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTL 541
Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 124/251 (49%), Gaps = 2/251 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD +YN +ID YCK V++A ++++ + PD ++Y S+I GL G
Sbjct: 281 MMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGD 340
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A ++ E + G PD YN+ ++ C+ + A +M+EM E+G P+ TYN+
Sbjct: 341 VERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNI 400
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
++ + + + G LP+ + L+ CKR K++ ALQL M E
Sbjct: 401 VINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRL-KLDSALQLVERMWEY 459
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
G + + + + LC GK+ E ++F EMI KG P+ +++ + +NK E
Sbjct: 460 GIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEA 519
Query: 240 QNLSNKMALFG 250
+ KM+ G
Sbjct: 520 SKVIVKMSQEG 530
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 116/255 (45%), Gaps = 2/255 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G PDI +YN +I+ CK + A ++ + PDV ++ ++I G +
Sbjct: 386 MAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLK 445
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A +++ M EYG PD YN+ + C A ++ + + EM+ KG PN TYN+
Sbjct: 446 LDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNI 505
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F SN + + + +M G P+ S L+ R +E A L+ + EKG
Sbjct: 506 LIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKG 565
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEAL 239
+ + + L + AEK F EM+ KGH+ ++R I + AN A
Sbjct: 566 YSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAY 625
Query: 240 QNLSNKMAL-FGPSM 253
+L + F PSM
Sbjct: 626 MHLVEMIKKGFIPSM 640
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 107/224 (47%), Gaps = 1/224 (0%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
+ G+ ++ +YN I C+ ++ +A ++V+ MR + PDV++Y ++I GL P
Sbjct: 214 QRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQ 272
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
+A L+ M GC PD YN I YC +++A+ L+ + V KG P+ TY
Sbjct: 273 EAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLI 332
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
D+ + L+ G P+ LVK Q + ALQ+ N+M E+G
Sbjct: 333 NGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCH 392
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
I +++ + LC MG + +A + I KG+ P +F +
Sbjct: 393 PDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTL 436
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 117/282 (41%), Gaps = 40/282 (14%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV PD+ ++ + +C + A +++ + ++Y +++ GL G
Sbjct: 111 MLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGLYAHGH 166
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
AR + +M +P+ AA+N + C + +A L+ +++++G+S N TYN+
Sbjct: 167 THDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNI 226
Query: 121 FFR-------------------------VFYWSNDLRS---------SWNLYCRMMGTGC 146
+ R V ++ +R + + RMM GC
Sbjct: 227 WIRGLCEAGRLPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGC 286
Query: 147 LPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEK 206
LP+ + ++ + V+ A +L D V KGF + L + LC G + A +
Sbjct: 287 LPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALE 346
Query: 207 SFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLSNKMA 247
F E KG KP V + +K L ALQ + N+MA
Sbjct: 347 LFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQ-VMNEMA 387
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 83/186 (44%), Gaps = 8/186 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ PD VS+N LI +C++ +E AY + +K+ ++ S ++ ++IG
Sbjct: 526 MSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLN 585
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A + EM G D+ Y I C + A + EM++KG P+ +T+
Sbjct: 586 MHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGR 645
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQ--LWNDMVE 178
++ + + + M+ G +P +V +K EIA L D+++
Sbjct: 646 VINSLTVNHRVFQAVGIIHIMVKIGVVPE------VVDTILNADKKEIAAPKILVEDLMK 699
Query: 179 KGFGSY 184
KG SY
Sbjct: 700 KGHISY 705
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 97/236 (41%), Gaps = 8/236 (3%)
Query: 13 YNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMK 72
Y I Y + ++ A E+M P +Y +I+ L D+A V M
Sbjct: 53 YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 112
Query: 73 EYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLR 132
G PD + +R++C+ R A L+ + +G A Y Y
Sbjct: 113 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGLYAHGHTH 168
Query: 133 SSWNLYCRMMGTGCLPNTQSC-MFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVL 191
+ L+ +M+ T PN + L LCKR + +E L L ++++G + ++
Sbjct: 169 DARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGL-LLGKVIQRGMSINLFTYNIW 227
Query: 192 FDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLSNKM 246
LC+ G+L EA + ++ + P V++ I+ L + + QEA+ L M
Sbjct: 228 IRGLCEAGRLPEAVR-LVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMM 282
>gi|356515931|ref|XP_003526650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Glycine max]
Length = 461
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 129/249 (51%), Gaps = 1/249 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G PD+V+Y ++DV CK +V++A ++V++M + P Y+ ++ G+ +
Sbjct: 207 MVEAGCDPDVVTYGIMVDVLCKAGRVDEAVEVVKEMDVGNCRPTSFIYSVLVHTYGVEHR 266
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A D EM + G D AYNA I +C + ++ ++ EM G++PN+ T N+
Sbjct: 267 IEDAIDTFLEMAKKGIKADVVAYNALIGAFCKVNKFKNVHRVLKEMESNGVAPNSRTCNV 326
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++ ++CRM+ C P+ + ++K+ + ++E+AL++W M K
Sbjct: 327 IISSMIGQGQTDRAFRVFCRMIKL-CEPDADTYTMMIKMFCEKNELEMALKIWKYMKSKQ 385
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
F + L LC+ +A EMIEKG +PS+++F R++ L+ +++ L+
Sbjct: 386 FVPSMHTFSALIKGLCEKDNAAKACVVMEEMIEKGIRPSRITFGRLRQLLIKEGREDVLK 445
Query: 241 NLSNKMALF 249
L KM L
Sbjct: 446 FLHEKMNLL 454
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 89/219 (40%), Gaps = 39/219 (17%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
++ G I +Y+ +I+ K RQ + + +V MR + + +V ++ ++ +
Sbjct: 70 KQRGYSHSIRAYHLMIESLAKIRQYQIVWDLVSAMRKKGML-NVETFCIMMRKYARANKV 128
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKG-LSPNATTYNL 120
D+A M +Y P+ AA+N + C + +R A + D M KG P+ +Y++
Sbjct: 129 DEAVYTFNVMDKYDVVPNLAAFNGLLSALCKSNNVRKAQEIFDAM--KGQFVPDEKSYSI 186
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
G G PN A +++ +MVE G
Sbjct: 187 LLE-------------------GWGKAPNLPR----------------AREVFREMVEAG 211
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
++ ++ D+LC G++ EA + EM +P+
Sbjct: 212 CDPDVVTYGIMVDVLCKAGRVDEAVEVVKEMDVGNCRPT 250
>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
Length = 684
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 112/223 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G +P +V+Y L++ CK +A +++++MR + +P++++Y II G+ G+
Sbjct: 171 MLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGR 230
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D AR+ L + YG PD +Y ++ C AKR D L EM+EK PN T+++
Sbjct: 231 VDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDM 290
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
R F + + + +M G GC NT C ++ +Q +V+ A Q N+M G
Sbjct: 291 LVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYG 350
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + LC + +A++ EM+ K P++V+F
Sbjct: 351 CSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTF 393
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 119/276 (43%), Gaps = 35/276 (12%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E P+ V+++ L+ +C+ VE+A +++E+M + + +I + G+
Sbjct: 276 MMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGR 335
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A L M YGC PD +Y ++ C A+R DA L+ EMV K PN T+N
Sbjct: 336 VDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNT 395
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTG--------------------------------CLP 148
F + + + L +M G C P
Sbjct: 396 FICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKP 455
Query: 149 NTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKS 207
NT + L LC E+++ A +L +M++K ++ +VL C G + EA +
Sbjct: 456 NTITYTTLLTGLCN-AERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIEL 514
Query: 208 FLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNL 242
+M+E G P+ +++ + + + N +EAL+ L
Sbjct: 515 VEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELL 550
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 107/219 (48%), Gaps = 3/219 (1%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P+ V++N I + C+ +E+A ++E+M + ++++Y +++ G + G+ D A ++
Sbjct: 388 PNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALEL 447
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
M C P+ Y + C A+RL A+ L+ EM++K +PN T+N+ F
Sbjct: 448 FYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQ 504
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ + L +MM GC PN + L+ + E AL+L + +V G I+
Sbjct: 505 KGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVT 564
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ +L ++ EA K F + + G +P V + +I
Sbjct: 565 YSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKI 603
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 106/223 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G P+IV+YN +I+ C++ +V+ A + + ++ PD +SYT+++ GL +
Sbjct: 206 MRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKR 265
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ ++ EM E C P+ ++ +R +C + A ++++M G + N T N+
Sbjct: 266 WEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNI 325
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ M GC P+T S ++K R E+ E A +L +MV K
Sbjct: 326 VINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKN 385
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + +LC G + +A +M E G + + V++
Sbjct: 386 CPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTY 428
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 96/219 (43%), Gaps = 3/219 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PD+ LI C+ + A +++ + DV +Y +++ G GQ D A
Sbjct: 73 GEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAA 132
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
R ++ M PDA Y IR C R+ +A L+D+M+ +G P+ TY +
Sbjct: 133 RRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEA 189
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
S + + M GC PN + ++ R+ +V+ A + N + GF
Sbjct: 190 VCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPD 249
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + LC + + E+ F EM+EK P++V+F
Sbjct: 250 TVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTF 288
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 117/235 (49%), Gaps = 5/235 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G + +IV+YN L++ +C +V+ A ++ M P+ I+YT+++ GL +
Sbjct: 416 MSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM---PCKPNTITYTTLLTGLCNAER 472
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A ++L EM + C P+ +N + +C + +A L+++M+E G +PN TYN
Sbjct: 473 LDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNT 532
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + L ++ G P+ + ++ + R+++VE A+++++ + + G
Sbjct: 533 LLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLG 592
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANK 235
++ + + LC A F M+ G P+++++ I + LAN+
Sbjct: 593 MRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTY--ITLIEGLANE 645
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/173 (20%), Positives = 87/173 (50%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P++V++N L+ +C+ +++A ++VE+M + +P++I+Y +++ G+ ++A ++
Sbjct: 490 PNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALEL 549
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L + G PD Y++ I R+ +A + + + G+ P A YN
Sbjct: 550 LHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCK 609
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + + M+ GC+PN + + L++ ++ ++ L ++ +G
Sbjct: 610 RCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRG 662
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 100/215 (46%), Gaps = 6/215 (2%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
M KP+ ++Y L+ C +++ A +++ +M +D +P+V+++ ++ G D+
Sbjct: 451 MPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDE 510
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
A +++++M E+GC P+ YN + +A L+ +V G+SP+ TY+
Sbjct: 511 AIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIG 570
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMF---LVKLCKRQEKVEIALQLWNDMVEKG 180
V + + + ++ + G P ++ ++ L+ LCKR + A+ + MV G
Sbjct: 571 VLSREDRVEEAIKMFHIVQDLGMRP--KAVIYNKILLALCKRC-NTDGAIDFFAYMVSNG 627
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
L L + L + L E E+ +G
Sbjct: 628 CMPNELTYITLIEGLANEDFLKETRDLLRELCSRG 662
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 99/219 (45%), Gaps = 3/219 (1%)
Query: 28 KAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAI 87
+A ++V++ +PDV T +I L G+ A VL+ + G D AYN +
Sbjct: 61 EAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLV 120
Query: 88 RNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCL 147
YC +L A L+ M ++P+A TY R + + +L M+ GC
Sbjct: 121 AGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQ 177
Query: 148 PNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKS 207
P+ + L++ + A+++ ++M KG I+ +V+ + +C G++ +A +
Sbjct: 178 PSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREF 237
Query: 208 FLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKM 246
+ G +P VS+ + + A + E ++ L +M
Sbjct: 238 LNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEM 276
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 51/107 (47%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV PDIV+Y+ +I V ++ +VE+A K+ ++D + P + Y I+ L D A
Sbjct: 557 GVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGA 616
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGL 111
D M GC P+ Y I L++ L+ E+ +G+
Sbjct: 617 IDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGV 663
>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Glycine max]
Length = 747
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 117/223 (52%), Gaps = 1/223 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PDI +YN LID YCK +++ A ++V +M + ++PDVI+Y +++ GL G+ ++
Sbjct: 430 GCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEV 489
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++ K M+E GC P+ YN + + C AK++ +A L+ EM KGL P+ ++ F
Sbjct: 490 MEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTG 549
Query: 125 FYWSNDLRSSWNLYCRMMGT-GCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
F D+ ++ L+ RM T + +V Q + +A++L++ M G
Sbjct: 550 FCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDP 609
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
V+ D C MG + + K LE +EK PS +F R+
Sbjct: 610 DNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFIPSLTTFGRV 652
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 108/220 (49%), Gaps = 2/220 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G KPD +Y LI+ +CKD ++A + + + + P ++ Y ++I GL G A
Sbjct: 325 GFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPA 384
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++ EM E GC P+ YN I C + DAS L+D+ + KG P+ TYN
Sbjct: 385 LQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDG 444
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGS 183
+ L S+ + RM G P+ + L+ LCK + E+ ++++ M EKG
Sbjct: 445 YCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEV-MEIFKAMEEKGCTP 503
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I+ +++ D LC K+ EA EM KG KP VSF
Sbjct: 504 NIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSF 543
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 107/228 (46%), Gaps = 9/228 (3%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA--- 64
PD+V++N L+ V CK V ++ +++ K+ + P++ ++ + GL G D+A
Sbjct: 214 PDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRN 273
Query: 65 ------RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
+ L++M G PD YN+ I YC ++DA+ ++ + V KG P+ TY
Sbjct: 274 SRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTY 333
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
F D + ++ +G G P+ L+K +Q + ALQL N+M E
Sbjct: 334 CSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAE 393
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G I +++ + LC MG + +A + I KG P ++ +
Sbjct: 394 NGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTL 441
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 94/207 (45%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G++P IV YN LI + + A +++ +M + P++ +Y +I GL +G A
Sbjct: 360 GLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDA 419
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++ + GC PD YN I YC +L A+ +++ M +G++P+ TYN
Sbjct: 420 SHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNG 479
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ ++ M GC PN + +V + +KV A+ L +M KG
Sbjct: 480 LCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPD 539
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEM 211
++ LF C +G + A + F M
Sbjct: 540 VVSFGTLFTGFCKIGDIDGAYQLFRRM 566
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 9/225 (4%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P + S+N ++++ + +A+K+ +MRD + DV +YT I +P A +
Sbjct: 109 PSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGVQSDVYTYTIRIKSFCKTARPYAALRL 168
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L+ M E GC +A AY + + A L DEM+ + L P+ +N V
Sbjct: 169 LRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEMLARCLCPDVVAFNKLVHVLCK 228
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSC-MFLVKLCK--------RQEKVEIALQLWNDMVE 178
+ S L +++ G PN + +F+ LC+ R +V A + MV
Sbjct: 229 KGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVN 288
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
GF L + + D C G + +A + + + KG KP + ++
Sbjct: 289 GGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTY 333
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 119/257 (46%), Gaps = 11/257 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ GV+ D+ +Y I +CK + A +++ M + + ++Y +++ GL G+
Sbjct: 137 MRDRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGE 196
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D AR++ EM PD A+N + C + ++ L+ +++++G+ PN T+N+
Sbjct: 197 HDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNI 256
Query: 121 FFRVFYWSNDL-RSSWNL-------YCR-MMGTGCLPNTQSCMFLVKLCKRQEKVEIALQ 171
F + L R+ N Y R M+ G P+ + ++ ++ V+ A +
Sbjct: 257 FVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANR 316
Query: 172 LWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALM 230
+ D V KGF L + C G A F + + KG +PS V + IK L
Sbjct: 317 VLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLS 376
Query: 231 ELANKQEALQNLSNKMA 247
+ ALQ L N+MA
Sbjct: 377 QQGLILPALQ-LMNEMA 392
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 108/258 (41%), Gaps = 44/258 (17%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G P+I++YN ++D CK ++V +A ++ +M+ + + PDV+S+ ++ G +G
Sbjct: 496 MEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGD 555
Query: 61 PDKARDVLKEM------------------------------------KEYGCYPDAAAYN 84
D A + + M K GC PD Y
Sbjct: 556 IDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYR 615
Query: 85 AAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGT 144
I +C + + E +EK P+ TT+ + + + + M+
Sbjct: 616 VVIDGFCKMGNITQGYKFLLENMEKRFIPSLTTFGRVLNCLCVKDKVHEAVGIIHLMLQK 675
Query: 145 GCLPNTQSCMFLVKLCKRQEKVEIALQ-LWNDMVEKGFGSYILVSDVLFDLLCDMGKLVE 203
G +P T + +F + +KV A + L D+++KG +Y ++L+D + D K+++
Sbjct: 676 GIVPETVNTIF-----EADKKVVAAPKILVEDLLKKGHIAY-YTYELLYDGIRDK-KILK 728
Query: 204 AEKSFLEMIEKGHKPSQV 221
+ + +G S V
Sbjct: 729 KRLPTVNSLHRGASSSAV 746
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 100/232 (43%), Gaps = 17/232 (7%)
Query: 20 YCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPD 79
Y + +V++A E+M + P V S+ +I+ L G ++A V M++ G D
Sbjct: 86 YGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGVQSD 145
Query: 80 AAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYC 139
Y I+++C R A L+ M E G NA Y Y S + + L+
Sbjct: 146 VYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFD 205
Query: 140 RMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDM 198
M+ P+ + LV LCK+ E + +L ++++G + ++ LC
Sbjct: 206 EMLARCLCPDVVAFNKLVHVLCKKGLVFE-SERLLGKVLKRGVCPNLFTFNIFVQGLCRE 264
Query: 199 GKL---------VEAEKSFLEMIEKGHKPSQVSFRRI------KALMELANK 235
G L VEAE+ +M+ G +P +++ I K +++ AN+
Sbjct: 265 GALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANR 316
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/266 (21%), Positives = 117/266 (43%), Gaps = 16/266 (6%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVI--SYTSIIGGLGLVGQ 60
E G K +Y C++ + E+ K++ +MR E+++ ++ +Y + G G+
Sbjct: 33 EDGFKHTASTYKCIVQKLGHHGEFEEMEKLLSEMR-ENVNNALLEGAYIEAMKNYGRKGK 91
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A D + M Y C P ++NA + A + M ++G+ + TY +
Sbjct: 92 VQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGVQSDVYTYTI 151
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ F + ++ L M GC N + C + L E + A +L+++M+ +
Sbjct: 152 RIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEH-DHARELFDEMLAR 210
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEA 238
++ + L +LC G + E+E+ +++++G P+ +F ++ L A
Sbjct: 211 CLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRA 270
Query: 239 LQNLSNKMALFGPSMIPKREEYLAEM 264
++N S + + EEYL +M
Sbjct: 271 VRN----------SRVVEAEEYLRKM 286
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 83/201 (41%), Gaps = 2/201 (0%)
Query: 28 KAYKIVEKMRDED-ISPDVISYTSIIGGLGLVGQPDKARDVLKEMKE-YGCYPDAAAYNA 85
KA ++ + ED +Y I+ LG G+ ++ +L EM+E AY
Sbjct: 22 KALEMFNSAKSEDGFKHTASTYKCIVQKLGHHGEFEEMEKLLSEMRENVNNALLEGAYIE 81
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
A++NY ++++A + M P+ ++N + + +Y RM G
Sbjct: 82 AMKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRG 141
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
+ + +K + + AL+L +M E G S + + L D G+ A
Sbjct: 142 VQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHAR 201
Query: 206 KSFLEMIEKGHKPSQVSFRRI 226
+ F EM+ + P V+F ++
Sbjct: 202 ELFDEMLARCLCPDVVAFNKL 222
>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
Length = 684
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 112/223 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G +P +V+Y L++ CK +A +++++MR + +P++++Y II G+ G+
Sbjct: 171 MLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGR 230
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D AR+ L + YG PD +Y ++ C AKR D L EM+EK PN T+++
Sbjct: 231 VDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDM 290
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
R F + + + +M G GC NT C ++ +Q +V+ A Q N+M G
Sbjct: 291 LVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYG 350
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + LC + +A++ EM+ K P++V+F
Sbjct: 351 CSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTF 393
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 118/276 (42%), Gaps = 35/276 (12%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E P+ V+++ L+ +C+ VE+A +++E+M + + +I + G+
Sbjct: 276 MMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGR 335
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A L M YGC PD +Y ++ C A+R DA L+ EMV K PN T+N
Sbjct: 336 VDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNT 395
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTG--------------------------------CLP 148
F + + + L +M G C P
Sbjct: 396 FICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKP 455
Query: 149 NTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKS 207
NT + L LC E+++ A +L +M++K ++ +VL C G + EA +
Sbjct: 456 NTITYTTLLTGLCN-AERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIEL 514
Query: 208 FLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNL 242
+M+E G P+ +++ + + N +EAL+ L
Sbjct: 515 VEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELL 550
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 106/223 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G P+IV+YN +I+ C++ +V+ A + + ++ PD +SYT+++ GL +
Sbjct: 206 MRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKR 265
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ ++ EM E C P+ ++ +R +C + A ++++M G + N T N+
Sbjct: 266 WEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNI 325
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ M GC P+T S ++K R E+ E A +L +MV K
Sbjct: 326 VINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKN 385
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + +LC G + +A +M E G + + V++
Sbjct: 386 CPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTY 428
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 96/219 (43%), Gaps = 3/219 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PD+ LI C+ + A +++ + DV +Y +++ G GQ D A
Sbjct: 73 GEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAA 132
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
R ++ M PDA Y IR C R+ +A L+D+M+ +G P+ TY +
Sbjct: 133 RRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEA 189
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
S + + M GC PN + ++ R+ +V+ A + N + GF
Sbjct: 190 VCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPD 249
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + LC + + E+ F EM+EK P++V+F
Sbjct: 250 TVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTF 288
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 117/235 (49%), Gaps = 5/235 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G + +IV+YN L++ +C +V+ A ++ M P+ I+YT+++ GL +
Sbjct: 416 MSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM---PCKPNTITYTTLLTGLCNAER 472
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A ++L EM + C P+ +N + +C + +A L+++M+E G +PN TYN
Sbjct: 473 LDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNT 532
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + L ++ G P+ + ++ + R+++VE A+++++ + + G
Sbjct: 533 LLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLG 592
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANK 235
++ + + LC A F M+ G P+++++ I + LAN+
Sbjct: 593 MRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTY--ITLIEGLANE 645
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 109/237 (45%), Gaps = 3/237 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD +SY ++ C+ + E A +++++M ++ P+ +++ + I L G
Sbjct: 346 MGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGL 405
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A ++++M E+GC + YNA + +C+ R+ A L M K PN TY
Sbjct: 406 IEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTT 462
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L ++ L M+ C PN + LV ++ ++ A++L M+E G
Sbjct: 463 LLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHG 522
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQE 237
++ + L D + + EA + ++ G P V++ I ++ ++ E
Sbjct: 523 CTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVE 579
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/173 (20%), Positives = 87/173 (50%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P++V++N L+ +C+ +++A ++VE+M + +P++I+Y +++ G+ ++A ++
Sbjct: 490 PNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALEL 549
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L + G PD Y++ I R+ +A + + + G+ P A YN
Sbjct: 550 LHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCK 609
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + + M+ GC+PN + + L++ ++ ++ L ++ +G
Sbjct: 610 RCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRG 662
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 104/218 (47%), Gaps = 12/218 (5%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
M KP+ ++Y L+ C +++ A +++ +M +D +P+V+++ ++ G D+
Sbjct: 451 MPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDE 510
Query: 64 ARDVLKEMKEYGCYPDAAAYNA---AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +++++M E+GC P+ YN I N C ++ +A L+ +V G+SP+ TY+
Sbjct: 511 AIELVEQMMEHGCTPNLITYNTLLDGITNDCNSE---EALELLHGLVSNGVSPDIVTYSS 567
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMF---LVKLCKRQEKVEIALQLWNDMV 177
V + + + ++ + G P ++ ++ L+ LCKR + A+ + MV
Sbjct: 568 IIGVLSREDRVEEAIKMFHIVQDLGMRP--KAVIYNKILLALCKRC-NTDGAIDFFAYMV 624
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
G L L + L + L E E+ +G
Sbjct: 625 SNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRG 662
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 99/219 (45%), Gaps = 3/219 (1%)
Query: 28 KAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAI 87
+A ++V++ +PDV T +I L G+ A VL+ + G D AYN +
Sbjct: 61 EAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLV 120
Query: 88 RNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCL 147
YC +L A L+ M ++P+A TY R + + +L M+ GC
Sbjct: 121 AGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQ 177
Query: 148 PNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKS 207
P+ + L++ + A+++ ++M KG I+ +V+ + +C G++ +A +
Sbjct: 178 PSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREF 237
Query: 208 FLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKM 246
+ G +P VS+ + + A + E ++ L +M
Sbjct: 238 LNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEM 276
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 51/107 (47%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV PDIV+Y+ +I V ++ +VE+A K+ ++D + P + Y I+ L D A
Sbjct: 557 GVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGA 616
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGL 111
D M GC P+ Y I L++ L+ E+ +G+
Sbjct: 617 IDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGV 663
>gi|297807523|ref|XP_002871645.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317482|gb|EFH47904.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 524
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 74/221 (33%), Positives = 117/221 (52%), Gaps = 4/221 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +GVK D+VSY+ +I Y K + K K+ ++M+ E I PD Y ++I L
Sbjct: 242 MGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKESIEPDRKVYNAVIHALAKASF 301
Query: 61 PDKARDVLKEM-KEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+AR+++K M +E G P+ YN+ I+ C A++ +A + DEM+EKGL P TY+
Sbjct: 302 VSEARNLMKTMEEEKGMEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYH 361
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
F R+ ++ + L +M GC P + + L++ R + L LWN+M EK
Sbjct: 362 AFMRILRTGEEV---FELLAKMRKMGCQPTVDTYIMLIRKLCRWRDFDNVLLLWNEMKEK 418
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQ 220
G G + V+ L GK+ EA + EM EKG +P++
Sbjct: 419 GVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKEKGMRPNE 459
>gi|218193742|gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indica Group]
Length = 1874
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 123/242 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G P +V+Y L++ YC ++ + Y ++++MR P+V++YT ++ LG G+
Sbjct: 1616 MKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNVVTYTILMHALGKAGR 1675
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A D ++KE G PDA+ YN+ I A RL DA +++EM G++PN TT+N
Sbjct: 1676 TREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEMRTTGIAPNVTTFNT 1735
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ L +M C P+ ++ L+KLC +++ V+I L L M K
Sbjct: 1736 LISAACDHSQAENALKLLVKMEEQSCNPDIKTYTPLLKLCCKRQWVKILLFLVCHMFRKD 1795
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+L LC GK+ ++ EM+ KG P Q +F + +E N Q +
Sbjct: 1796 ISPDFSTYTLLVSWLCRNGKVAQSCLFLEEMVSKGFAPKQETFDLVMEKLEKRNLQSVYK 1855
Query: 241 NL 242
+
Sbjct: 1856 KI 1857
Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 99/218 (45%), Gaps = 1/218 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV D + N L+D CK+R V++A + +++R I PD S+ +++ G
Sbjct: 1547 MDRFGVVKDTKAMNVLLDTLCKERSVKRARGVFQELRGT-IPPDENSFNTLVHGWCKARM 1605
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A D ++EMK++G P Y + + YC+ K + L+DEM ++ PN TY +
Sbjct: 1606 LKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNVVTYTI 1665
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ R + + + ++ G P+ L+ + R ++E A + +M G
Sbjct: 1666 LMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEMRTTG 1725
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
+ + L CD + A K ++M E+ P
Sbjct: 1726 IAPNVTTFNTLISAACDHSQAENALKLLVKMEEQSCNP 1763
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/266 (19%), Positives = 104/266 (39%), Gaps = 35/266 (13%)
Query: 12 SYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEM 71
SY+ ++D+ K +Q + + ++ +M + +++ T ++ L + +A D +M
Sbjct: 1488 SYDLMVDILGKFKQFDLMWGLINQMVEVGGLMSLMTMTKVMRRLAGASRWTEAIDAFHKM 1547
Query: 72 KEYGCY----------------------------------PDAAAYNAAIRNYCIAKRLR 97
+G PD ++N + +C A+ L+
Sbjct: 1548 DRFGVVKDTKAMNVLLDTLCKERSVKRARGVFQELRGTIPPDENSFNTLVHGWCKARMLK 1607
Query: 98 DASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV 157
+A M+EM + G SP+ TY + D ++ + L M C PN + L+
Sbjct: 1608 EALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNVVTYTILM 1667
Query: 158 KLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHK 217
+ + AL ++ + E G + L +L G+L +A EM G
Sbjct: 1668 HALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEMRTTGIA 1727
Query: 218 PSQVSFRR-IKALMELANKQEALQNL 242
P+ +F I A + + + AL+ L
Sbjct: 1728 PNVTTFNTLISAACDHSQAENALKLL 1753
>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Vitis vinifera]
Length = 609
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 125/223 (56%), Gaps = 4/223 (1%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ P+ +++N LID +C+D V A K+ E+M+ + + P+V++Y S+I GL G+ D+A
Sbjct: 295 IHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEAL 354
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+ +M G P+ YNA I +C K L++A ++D++ ++GL+PN T+N +
Sbjct: 355 GLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAY 414
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPN--TQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
+ + ++ L M+ TG PN T +C+ +V C R+ V+ A +L +M G +
Sbjct: 415 GKAGRMDDAFLLRSMMLDTGVCPNVSTYNCL-IVGFC-REGNVKEARKLAKEMEGNGLKA 472
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ ++L D LC G+ +A + EM E G PS +++ +
Sbjct: 473 DLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNAL 515
Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 115/223 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M MG+KP++V+YN LI+ +CK + +++A ++++ + ++P+VI++ ++I G G+
Sbjct: 360 MSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGR 419
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A + M + G P+ + YN I +C +++A L EM GL + TYN+
Sbjct: 420 MDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNI 479
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ R + L M G P+ + L+ R+ AL + M +KG
Sbjct: 480 LVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKG 539
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ I+ +VL C+ GKL EA + EM+EKG P++ ++
Sbjct: 540 RRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTY 582
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 105/214 (49%), Gaps = 16/214 (7%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ P+++++N LID Y K +++ A+ + M D + P+V +Y +I G G +A
Sbjct: 399 GLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEA 458
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
R + KEM+ G D YN + C R A L+DEM E GL+P+ TYN
Sbjct: 459 RKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDG 518
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
++ + ++ N+ M G N + L+K + K+E A +L N+M+EKG
Sbjct: 519 YFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKG---- 574
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
++ + +D+L D EM+EKG P
Sbjct: 575 LIPNRTTYDILRD------------EMMEKGFIP 596
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 111/222 (50%), Gaps = 2/222 (0%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
R +GV ++V+++ +I+ CK + +KA +VE M+ SP VI+Y +II G G+
Sbjct: 223 RRIGV--NVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKM 280
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
KA +LKEM +P+ +N I +C + + A + +EM +GL PN TYN
Sbjct: 281 FKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSL 340
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
+ L + L +M G G PN + L+ +++ ++ A ++ +D+ ++G
Sbjct: 341 INGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGL 400
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + L D G++ +A M++ G P+ ++
Sbjct: 401 APNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTY 442
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 107/224 (47%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
+ G + +S N ++ K+ ++ + ++M I +V+++ +I GL VG+
Sbjct: 187 DYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQ 246
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
KA DV+++MK +G P YN I YC A ++ A L+ EMV K + PN T+N+
Sbjct: 247 KAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILI 306
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
F ++ ++ ++ M G PN + L+ K++ AL L + M G
Sbjct: 307 DGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLK 366
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ + L + C L EA + ++ ++G P+ ++F +
Sbjct: 367 PNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTL 410
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 72/121 (59%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+K D+V+YN L+D CK + KA +++++M + ++P ++Y ++I G G
Sbjct: 465 MEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGN 524
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +V M++ G + YN I+ +C +L +A+ L++EM+EKGL PN TTY++
Sbjct: 525 STAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDI 584
Query: 121 F 121
Sbjct: 585 L 585
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 89/211 (42%)
Query: 16 LIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYG 75
L+ Y K+ +++ A + ++ D +S ++ L G+ V KEM
Sbjct: 165 LVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRR 224
Query: 76 CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSW 135
+ ++ I C + + A ++++M G SP+ TYN + + + +
Sbjct: 225 IGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKAD 284
Query: 136 NLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLL 195
L M+ PN + L+ R E V A +++ +M +G ++ + L + L
Sbjct: 285 ALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGL 344
Query: 196 CDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
C GKL EA +M G KP+ V++ +
Sbjct: 345 CSNGKLDEALGLQDKMSGMGLKPNVVTYNAL 375
>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
Length = 715
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 112/223 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G +P +V+Y L++ CK +A +++++MR + +P++++Y II G+ G+
Sbjct: 202 MLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGR 261
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D AR+ L + YG PD +Y ++ C AKR D L EM+EK PN T+++
Sbjct: 262 VDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDM 321
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
R F + + + +M G GC NT C ++ +Q +V+ A Q N+M G
Sbjct: 322 LVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYG 381
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + LC + +A++ EM+ K P++V+F
Sbjct: 382 CSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTF 424
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 119/276 (43%), Gaps = 35/276 (12%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E P+ V+++ L+ +C+ VE+A +++E+M + + +I + G+
Sbjct: 307 MMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGR 366
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A L M YGC PD +Y ++ C A+R DA L+ EMV K PN T+N
Sbjct: 367 VDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNT 426
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTG--------------------------------CLP 148
F + + + L +M G C P
Sbjct: 427 FICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKP 486
Query: 149 NTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKS 207
NT + L LC E+++ A +L +M++K ++ +VL C G + EA +
Sbjct: 487 NTITYTTLLTGLCN-AERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIEL 545
Query: 208 FLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNL 242
+M+E G P+ +++ + + + N +EAL+ L
Sbjct: 546 VEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELL 581
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 106/223 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G P+IV+YN +I+ C++ +V+ A + + ++ PD +SYT+++ GL +
Sbjct: 237 MRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKR 296
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ ++ EM E C P+ ++ +R +C + A ++++M G + N T N+
Sbjct: 297 WEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNI 356
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ M GC P+T S ++K R E+ E A +L +MV K
Sbjct: 357 VINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKN 416
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + +LC G + +A +M E G + + V++
Sbjct: 417 CPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTY 459
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 107/219 (48%), Gaps = 3/219 (1%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P+ V++N I + C+ +E+A ++E+M + ++++Y +++ G + G+ D A ++
Sbjct: 419 PNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALEL 478
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
M C P+ Y + C A+RL A+ L+ EM++K +PN T+N+ F
Sbjct: 479 FYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQ 535
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ + L +MM GC PN + L+ + E AL+L + +V G I+
Sbjct: 536 KGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVT 595
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ +L ++ EA K F + + G +P V + +I
Sbjct: 596 YSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKI 634
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 96/219 (43%), Gaps = 3/219 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PD+ LI C+ + A +++ + DV +Y +++ G GQ D A
Sbjct: 104 GEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAA 163
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
R ++ M PDA Y IR C R+ +A L+D+M+ +G P+ TY +
Sbjct: 164 RRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEA 220
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
S + + M GC PN + ++ R+ +V+ A + N + GF
Sbjct: 221 VCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPD 280
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + LC + + E+ F EM+EK P++V+F
Sbjct: 281 TVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTF 319
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 117/235 (49%), Gaps = 5/235 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G + +IV+YN L++ +C +V+ A ++ M P+ I+YT+++ GL +
Sbjct: 447 MSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM---PCKPNTITYTTLLTGLCNAER 503
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A ++L EM + C P+ +N + +C + +A L+++M+E G +PN TYN
Sbjct: 504 LDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNT 563
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + L ++ G P+ + ++ + R+++VE A+++++ + + G
Sbjct: 564 LLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLG 623
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANK 235
++ + + LC A F M+ G P+++++ I + LAN+
Sbjct: 624 MRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTY--ITLIEGLANE 676
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/173 (20%), Positives = 87/173 (50%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P++V++N L+ +C+ +++A ++VE+M + +P++I+Y +++ G+ ++A ++
Sbjct: 521 PNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALEL 580
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L + G PD Y++ I R+ +A + + + G+ P A YN
Sbjct: 581 LHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCK 640
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + + M+ GC+PN + + L++ ++ ++ L ++ +G
Sbjct: 641 RCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRG 693
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 99/219 (45%), Gaps = 3/219 (1%)
Query: 28 KAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAI 87
+A ++V++ +PDV T +I L G+ A VL+ + G D AYN +
Sbjct: 92 RAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLV 151
Query: 88 RNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCL 147
YC +L A L+ M ++P+A TY R + + +L M+ GC
Sbjct: 152 AGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQ 208
Query: 148 PNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKS 207
P+ + L++ + A+++ ++M KG I+ +V+ + +C G++ +A +
Sbjct: 209 PSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREF 268
Query: 208 FLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKM 246
+ G +P VS+ + + A + E ++ L +M
Sbjct: 269 LNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEM 307
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 100/215 (46%), Gaps = 6/215 (2%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
M KP+ ++Y L+ C +++ A +++ +M +D +P+V+++ ++ G D+
Sbjct: 482 MPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDE 541
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
A +++++M E+GC P+ YN + +A L+ +V G+SP+ TY+
Sbjct: 542 AIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIG 601
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMF---LVKLCKRQEKVEIALQLWNDMVEKG 180
V + + + ++ + G P ++ ++ L+ LCKR + A+ + MV G
Sbjct: 602 VLSREDRVEEAIKMFHIVQDLGMRP--KAVIYNKILLALCKRC-NTDGAIDFFAYMVSNG 658
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
L L + L + L E E+ +G
Sbjct: 659 CMPNELTYITLIEGLANEDFLKETRDLLRELCSRG 693
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 51/107 (47%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV PDIV+Y+ +I V ++ +VE+A K+ ++D + P + Y I+ L D A
Sbjct: 588 GVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGA 647
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGL 111
D M GC P+ Y I L++ L+ E+ +G+
Sbjct: 648 IDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGV 694
>gi|413939122|gb|AFW73673.1| hypothetical protein ZEAMMB73_530264 [Zea mays]
Length = 526
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 117/231 (50%), Gaps = 12/231 (5%)
Query: 5 GVKPDIVSYNCLIDVYCK----------DRQVEKAYKIVEKMRDEDISPDVISYTSIIGG 54
G++P+IV+YN L++ C+ DR V A ++++MR I PDV SY+ I+
Sbjct: 252 GIEPNIVTYNILLNGICRHASLHPDYRFDRTVHAAEDLLKEMRGRGIEPDVTSYSIILHV 311
Query: 55 LGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPN 114
+P+ + + MKE G P A Y + I+ RL D L+DEMV +G+ P+
Sbjct: 312 YSRAHKPELCLCMFRSMKERGICPTVATYTSVIKCLSSCGRLEDGEILLDEMVAEGVCPS 371
Query: 115 ATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCL--PNTQSCMFLVKLCKRQEKVEIALQL 172
TYN F + + D+ ++ LY +M G L P+ + L+ + + + + +
Sbjct: 372 PATYNCFLKEYRGRKDVTAALELYNKMKAPGSLTAPDIHTYNILLGMFSKLNRHGTVMDI 431
Query: 173 WNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
W+DM E G + +L CD K EA + F+EMIEKG P +++F
Sbjct: 432 WSDMCESTVGPDLDSYTLLIHCFCDSQKWREACQFFMEMIEKGFLPQKITF 482
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 102/241 (42%), Gaps = 25/241 (10%)
Query: 24 RQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMK-EYGCYPDAAA 82
RQ +A+ +E + PD + +++ L P A +V + K +YG P+
Sbjct: 169 RQAIRAFDDMEAFVSRE--PDAAEFATLLDTLCKYKYPKVATEVFNKRKYKYG--PNEKM 224
Query: 83 YNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV----------FYWSNDLR 132
Y+ I +C R A + +M+ G+ PN TYN+ + + +
Sbjct: 225 YSILIYGWCKVNRSDMAKKFLKDMLVHGIEPNIVTYNILLNGICRHASLHPDYRFDRTVH 284
Query: 133 SSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLF 192
++ +L M G G P+ S ++ + R K E+ L ++ M E+G + +
Sbjct: 285 AAEDLLKEMRGRGIEPDVTSYSIILHVYSRAHKPELCLCMFRSMKERGICPTVATYTSVI 344
Query: 193 DLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF----------RRIKALMELANKQEALQNL 242
L G+L + E EM+ +G PS ++ + + A +EL NK +A +L
Sbjct: 345 KCLSSCGRLEDGEILLDEMVAEGVCPSPATYNCFLKEYRGRKDVTAALELYNKMKAPGSL 404
Query: 243 S 243
+
Sbjct: 405 T 405
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 62/131 (47%), Gaps = 2/131 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDED--ISPDVISYTSIIGGLGLVGQPD 62
GV P +YNC + Y + V A ++ KM+ +PD+ +Y ++G + +
Sbjct: 367 GVCPSPATYNCFLKEYRGRKDVTAALELYNKMKAPGSLTAPDIHTYNILLGMFSKLNRHG 426
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
D+ +M E PD +Y I +C +++ R+A EM+EKG P T+ +
Sbjct: 427 TVMDIWSDMCESTVGPDLDSYTLLIHCFCDSQKWREACQFFMEMIEKGFLPQKITFETLY 486
Query: 123 RVFYWSNDLRS 133
R ++ LR+
Sbjct: 487 RGLIQADMLRT 497
>gi|413953911|gb|AFW86560.1| hypothetical protein ZEAMMB73_703962 [Zea mays]
Length = 287
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 117/231 (50%), Gaps = 12/231 (5%)
Query: 5 GVKPDIVSYNCLIDVYCK----------DRQVEKAYKIVEKMRDEDISPDVISYTSIIGG 54
G++P+IV+YN L++ C+ DR V A ++++MR I PDV SY+ I+
Sbjct: 13 GIEPNIVTYNILLNGICRHASLHPDYRFDRTVHAAEDLLKEMRGRGIEPDVTSYSIILHV 72
Query: 55 LGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPN 114
+P+ + + MKE G P A Y + I+ RL D L+DEMV +G+ P+
Sbjct: 73 YSRAHKPELCLCMFRSMKERGICPTVATYTSVIKCLSSCGRLEDGEILLDEMVAEGVCPS 132
Query: 115 ATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCL--PNTQSCMFLVKLCKRQEKVEIALQL 172
TYN F + + D+ ++ LY +M G L P+ + L+ + + + + +
Sbjct: 133 PATYNCFLKEYRGRKDVTAALELYNKMKAPGSLTAPDIHTYNILLGMFSKLNRHGTVMDI 192
Query: 173 WNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
W+DM E G + +L CD K EA + F+EMIEKG P +++F
Sbjct: 193 WSDMCESTVGPDLDSYTLLIHCFCDSQKWREACQFFMEMIEKGFLPQKITF 243
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 62/131 (47%), Gaps = 2/131 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDED--ISPDVISYTSIIGGLGLVGQPD 62
GV P +YNC + Y + V A ++ KM+ +PD+ +Y ++G + +
Sbjct: 128 GVCPSPATYNCFLKEYRGRKDVTAALELYNKMKAPGSLTAPDIHTYNILLGMFSKLNRHG 187
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
D+ +M E PD +Y I +C +++ R+A EM+EKG P T+ +
Sbjct: 188 TVMDIWSDMCESTVGPDLDSYTLLIHCFCDSQKWREACQFFMEMIEKGFLPQKITFETLY 247
Query: 123 RVFYWSNDLRS 133
R ++ LR+
Sbjct: 248 RGLIQADMLRT 258
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 76/190 (40%), Gaps = 35/190 (18%)
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
A+ LK+M +G P+ YN + C R AS L P+ F R
Sbjct: 2 AKKFLKDMLVHGIEPNIVTYNILLNGIC-----RHAS----------LHPDYR----FDR 42
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
+ + DL M G G P+ S ++ + R K E+ L ++ M E+G
Sbjct: 43 TVHAAEDLLKE------MRGRGIEPDVTSYSIILHVYSRAHKPELCLCMFRSMKERGICP 96
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF----------RRIKALMELA 233
+ + L G+L + E EM+ +G PS ++ + + A +EL
Sbjct: 97 TVATYTSVIKCLSSCGRLEDGEILLDEMVAEGVCPSPATYNCFLKEYRGRKDVTAALELY 156
Query: 234 NKQEALQNLS 243
NK +A +L+
Sbjct: 157 NKMKAPGSLT 166
>gi|21686921|gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 1833
Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 123/242 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G P +V+Y L++ YC ++ + Y ++++MR P+V++YT ++ LG G+
Sbjct: 1575 MKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNVVTYTILMHALGKAGR 1634
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A D ++KE G PDA+ YN+ I A RL DA +++EM G++PN TT+N
Sbjct: 1635 TREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEMRTTGIAPNVTTFNT 1694
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ L +M C P+ ++ L+KLC +++ V+I L L M K
Sbjct: 1695 LISAACDHSQAENALKLLVKMEEQSCNPDIKTYTPLLKLCCKRQWVKILLFLVCHMFRKD 1754
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+L LC GK+ ++ EM+ KG P Q +F + +E N Q +
Sbjct: 1755 ISPDFSTYTLLVSWLCRNGKVAQSCLFLEEMVSKGFAPKQETFDLVMEKLEKRNLQSVYK 1814
Query: 241 NL 242
+
Sbjct: 1815 KI 1816
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 99/218 (45%), Gaps = 1/218 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV D + N L+D CK+R V++A + +++R I PD S+ +++ G
Sbjct: 1506 MDRFGVVKDTKAMNVLLDTLCKERSVKRARGVFQELRGT-IPPDENSFNTLVHGWCKARM 1564
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A D ++EMK++G P Y + + YC+ K + L+DEM ++ PN TY +
Sbjct: 1565 LKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNVVTYTI 1624
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ R + + + ++ G P+ L+ + R ++E A + +M G
Sbjct: 1625 LMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEMRTTG 1684
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
+ + L CD + A K ++M E+ P
Sbjct: 1685 IAPNVTTFNTLISAACDHSQAENALKLLVKMEEQSCNP 1722
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/266 (19%), Positives = 104/266 (39%), Gaps = 35/266 (13%)
Query: 12 SYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEM 71
SY+ ++D+ K +Q + + ++ +M + +++ T ++ L + +A D +M
Sbjct: 1447 SYDLMVDILGKFKQFDLMWGLINQMVEVGGLMSLMTMTKVMRRLAGASRWTEAIDAFHKM 1506
Query: 72 KEYGCY----------------------------------PDAAAYNAAIRNYCIAKRLR 97
+G PD ++N + +C A+ L+
Sbjct: 1507 DRFGVVKDTKAMNVLLDTLCKERSVKRARGVFQELRGTIPPDENSFNTLVHGWCKARMLK 1566
Query: 98 DASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV 157
+A M+EM + G SP+ TY + D ++ + L M C PN + L+
Sbjct: 1567 EALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNVVTYTILM 1626
Query: 158 KLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHK 217
+ + AL ++ + E G + L +L G+L +A EM G
Sbjct: 1627 HALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEMRTTGIA 1686
Query: 218 PSQVSFRR-IKALMELANKQEALQNL 242
P+ +F I A + + + AL+ L
Sbjct: 1687 PNVTTFNTLISAACDHSQAENALKLL 1712
>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
Length = 738
Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 122/222 (54%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PD+ ++N LID YCK +++ A ++VE+M + I+PD I+Y S++ GL G+ ++
Sbjct: 428 GYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEV 487
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ +EM GC+P+ YN I N+C + ++ +AS ++ +M ++GL P+A ++N
Sbjct: 488 NETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYG 547
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
F + DL ++ L+ ++ G + L+ + + +A +++++M+ KG +
Sbjct: 548 FCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRAD 607
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
VL D C + A +EMI+KG PS +F R+
Sbjct: 608 SYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRV 649
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 112/223 (50%), Gaps = 2/223 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PD V+Y LI+ C + VE+A ++ + + + I PD++ Y S++ GL L G A
Sbjct: 323 GFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHA 382
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
V+ EM E GC+PD YN I C + DA+ +M++ + KG P+ T+N
Sbjct: 383 LQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDG 442
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSC-MFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
+ L S+ L RM G P+T + L LCK + E+ + + +M+ KG
Sbjct: 443 YCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVN-ETFQEMILKGCHP 501
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ ++L + C K+ EA K ++M ++G P VSF +
Sbjct: 502 NPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTL 544
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 124/251 (49%), Gaps = 2/251 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD +YN +ID YCK V++A ++++ + PD ++Y S+I GL G
Sbjct: 284 MMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGD 343
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A ++ E + G PD YN+ ++ C+ + A +M+EM E+G P+ TYN+
Sbjct: 344 VERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNI 403
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
++ + + + G LP+ + L+ CKR K++ ALQL M E
Sbjct: 404 VINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRL-KLDSALQLVERMWEY 462
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
G + + + + LC GK+ E ++F EMI KG P+ +++ + +NK E
Sbjct: 463 GIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEA 522
Query: 240 QNLSNKMALFG 250
+ KM+ G
Sbjct: 523 SKVIVKMSQEG 533
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 116/255 (45%), Gaps = 2/255 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G PDI +YN +I+ CK + A ++ + PDV ++ ++I G +
Sbjct: 389 MAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLK 448
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A +++ M EYG PD YN+ + C A ++ + + EM+ KG PN TYN+
Sbjct: 449 LDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNI 508
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F SN + + + +M G P+ S L+ R +E A L+ + EKG
Sbjct: 509 LIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKG 568
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEAL 239
+ + + L + AEK F EM+ KGH+ ++R I + AN A
Sbjct: 569 YSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAY 628
Query: 240 QNLSNKMAL-FGPSM 253
+L + F PSM
Sbjct: 629 MHLVEMIKKGFIPSM 643
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 107/224 (47%), Gaps = 1/224 (0%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
+ G+ ++ +YN I C+ ++ +A ++V+ MR + PDV++Y ++I GL P
Sbjct: 217 QRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQ 275
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
+A L+ M GC PD YN I YC +++A+ L+ + V KG P+ TY
Sbjct: 276 EAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLI 335
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
D+ + L+ G P+ LVK Q + ALQ+ N+M E+G
Sbjct: 336 NGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCH 395
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
I +++ + LC MG + +A + I KG+ P +F +
Sbjct: 396 PDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTL 439
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 117/282 (41%), Gaps = 40/282 (14%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV PD+ ++ + +C + A +++ + ++Y +++ GL G
Sbjct: 114 MLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGLYAHGH 169
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
AR + +M +P+ AA+N + C + +A L+ +++++G+S N TYN+
Sbjct: 170 THDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNI 229
Query: 121 FFR-------------------------VFYWSNDLRS---------SWNLYCRMMGTGC 146
+ R V ++ +R + + RMM GC
Sbjct: 230 WIRGLCEAGRLPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGC 289
Query: 147 LPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEK 206
LP+ + ++ + V+ A +L D V KGF + L + LC G + A +
Sbjct: 290 LPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALE 349
Query: 207 SFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLSNKMA 247
F E KG KP V + +K L ALQ + N+MA
Sbjct: 350 LFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQ-VMNEMA 390
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 83/186 (44%), Gaps = 8/186 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ PD VS+N LI +C++ +E AY + +K+ ++ S ++ ++IG
Sbjct: 529 MSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLN 588
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A + EM G D+ Y I C + A + EM++KG P+ +T+
Sbjct: 589 MHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGR 648
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQ--LWNDMVE 178
++ + + + M+ G +P +V +K EIA L D+++
Sbjct: 649 VINSLTVNHRVFQAVGIIHIMVKIGVVPE------VVDTILNADKKEIAAPKILVEDLMK 702
Query: 179 KGFGSY 184
KG SY
Sbjct: 703 KGHISY 708
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 97/236 (41%), Gaps = 8/236 (3%)
Query: 13 YNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMK 72
Y I Y + ++ A E+M P +Y +I+ L D+A V M
Sbjct: 56 YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 115
Query: 73 EYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLR 132
G PD + +R++C+ R A L+ + +G A Y Y
Sbjct: 116 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGLYAHGHTH 171
Query: 133 SSWNLYCRMMGTGCLPNTQSC-MFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVL 191
+ L+ +M+ T PN + L LCKR + +E L L ++++G + ++
Sbjct: 172 DARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGL-LLGKVIQRGMSINLFTYNIW 230
Query: 192 FDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLSNKM 246
LC+ G+L EA + ++ + P V++ I+ L + + QEA+ L M
Sbjct: 231 IRGLCEAGRLPEAVR-LVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMM 285
>gi|115436822|ref|NP_001043145.1| Os01g0505500 [Oryza sativa Japonica Group]
gi|56201654|dbj|BAD73118.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113532676|dbj|BAF05059.1| Os01g0505500 [Oryza sativa Japonica Group]
gi|125570544|gb|EAZ12059.1| hypothetical protein OsJ_01942 [Oryza sativa Japonica Group]
Length = 540
Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 124/246 (50%), Gaps = 4/246 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+KPD+V+Y LI +CK + ++A K+ +M + P Y +I GLG + +
Sbjct: 285 MLDAGIKPDVVAYGMLISAFCKSGKCDEAIKVFHEMEESGCMPSPHVYCMLINGLGSMER 344
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + KE G + NA I YC A A ++DEM + G+ PN TY++
Sbjct: 345 LDEALKYFQLSKESGFPMEVPTCNAVIGAYCRALEFHHAFKMVDEMRKSGIGPNTRTYDI 404
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
S + ++NL+ RM GC P + +V + E+V++AL++W M EKG
Sbjct: 405 ILNHLIKSEKIEEAYNLFQRMERDGCEPELNTYTMMVGMFCSNERVDMALKVWKQMKEKG 464
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIK-ALME---LANKQ 236
+ + L + LC +L EA F EM++KG +P F +K AL+E + Q
Sbjct: 465 VLPCMHMFSALINGLCFENRLEEACVYFQEMLDKGIRPPGQLFSNLKEALVEGGRITLAQ 524
Query: 237 EALQNL 242
E Q L
Sbjct: 525 EVTQRL 530
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 100/236 (42%), Gaps = 1/236 (0%)
Query: 12 SYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEM 71
++ ++ Y + R+V++A + EKM + D+ Y +I L Q KA + KEM
Sbjct: 190 TFKIIVRRYARARKVKEAVETFEKMSSFGLKTDLSDYNWLIDILSKSKQVKKAHAIFKEM 249
Query: 72 KEYGCY-PDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSND 130
K G + PD Y + + K L + EM++ G+ P+ Y + F S
Sbjct: 250 KRKGRFIPDLKTYTVLMEGWGHEKDLLMLKAVYQEMLDAGIKPDVVAYGMLISAFCKSGK 309
Query: 131 LRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDV 190
+ ++ M +GC+P+ L+ E+++ AL+ + E GF + +
Sbjct: 310 CDEAIKVFHEMEESGCMPSPHVYCMLINGLGSMERLDEALKYFQLSKESGFPMEVPTCNA 369
Query: 191 LFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKM 246
+ C + A K EM + G P+ ++ I + + K E NL +M
Sbjct: 370 VIGAYCRALEFHHAFKMVDEMRKSGIGPNTRTYDIILNHLIKSEKIEEAYNLFQRM 425
>gi|449463418|ref|XP_004149431.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Cucumis sativus]
gi|449499065|ref|XP_004160711.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Cucumis sativus]
Length = 439
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 137/252 (54%), Gaps = 6/252 (2%)
Query: 2 REM---GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLV 58
REM G PD V+Y+ ++DV CK +V++A +IV++M + P Y+ ++ G+
Sbjct: 183 REMIDSGCIPDEVTYSIMVDVLCKAGRVDEAVEIVKEMDYNNCKPSSFIYSVLVHTYGVE 242
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
+ + A EM+ G D AAYNA I +C A ++++ ++ +M KG++PN+ T
Sbjct: 243 NRIEDAVSTFLEMERNGVMADVAAYNALISAFCKANKMKNVYRVLKDMDLKGVNPNSRTC 302
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKL-CKRQEKVEIALQLWNDMV 177
N+ + ++ ++ RM+ C P+ S ++K+ C R+E +++AL++W M
Sbjct: 303 NIIINSLIGRGETDEAFKIFRRMIKV-CEPDVDSYTMIIKMFCGRKE-LDMALKIWKYMK 360
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQE 237
+K F + VL + LC +G +A EMIEKG +PS +F R++ L+ +++
Sbjct: 361 KKQFVPSMHTFSVLINGLCQIGNATQACVLLEEMIEKGIRPSGATFGRLRHLLIKEGRKD 420
Query: 238 ALQNLSNKMALF 249
L+ L KM L
Sbjct: 421 VLKFLQEKMNLL 432
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 113/239 (47%), Gaps = 2/239 (0%)
Query: 12 SYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEM 71
+Y+ +I+ K RQ + + +V MR+++I +V ++ I+ + ++A M
Sbjct: 58 AYHSMIESLAKIRQYQMVWDLVNAMRNKEIL-NVEAFCIIMRKYARAQKVEEAVYTFNVM 116
Query: 72 KEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDL 131
++Y P+ AA+N + C +K +R A + D M ++ P++ TY++ + + +L
Sbjct: 117 EKYNMKPNVAAFNGLLSALCKSKNVRKAQEIFDNMKDQ-FVPDSKTYSILIEGWGRAPNL 175
Query: 132 RSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVL 191
+ +Y M+ +GC+P+ + +V + + +V+ A+++ +M + VL
Sbjct: 176 PKAREIYREMIDSGCIPDEVTYSIMVDVLCKAGRVDEAVEIVKEMDYNNCKPSSFIYSVL 235
Query: 192 FDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFG 250
++ +A +FLEM G ++ + + ANK + + + M L G
Sbjct: 236 VHTYGVENRIEDAVSTFLEMERNGVMADVAAYNALISAFCKANKMKNVYRVLKDMDLKG 294
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 85/200 (42%), Gaps = 1/200 (0%)
Query: 20 YCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPD 79
Y + ++VE+A M ++ P+V ++ ++ L KA+++ MK+ PD
Sbjct: 100 YARAQKVEEAVYTFNVMEKYNMKPNVAAFNGLLSALCKSKNVRKAQEIFDNMKDQFV-PD 158
Query: 80 AAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYC 139
+ Y+ I + A L A + EM++ G P+ TY++ V + + + +
Sbjct: 159 SKTYSILIEGWGRAPNLPKAREIYREMIDSGCIPDEVTYSIMVDVLCKAGRVDEAVEIVK 218
Query: 140 RMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMG 199
M C P++ LV + ++E A+ + +M G + + + L C
Sbjct: 219 EMDYNNCKPSSFIYSVLVHTYGVENRIEDAVSTFLEMERNGVMADVAAYNALISAFCKAN 278
Query: 200 KLVEAEKSFLEMIEKGHKPS 219
K+ + +M KG P+
Sbjct: 279 KMKNVYRVLKDMDLKGVNPN 298
>gi|224111544|ref|XP_002315895.1| predicted protein [Populus trichocarpa]
gi|222864935|gb|EEF02066.1| predicted protein [Populus trichocarpa]
Length = 424
Score = 126 bits (317), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 124/227 (54%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G +PD+V+Y LI+ +CK R+ + A ++ +M ++ P Y ++I GLG +
Sbjct: 169 MKDEGFEPDVVTYGILINAHCKSRRYDDAIELFHEMEAKNCKPSPHIYCTLINGLGAEKR 228
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + + K G P+A YNA + YC ++R+ D +DEM + G+ P+A TY++
Sbjct: 229 LSEALEFFELSKASGFVPEAPTYNAVVGAYCWSERMDDVQRTIDEMRKGGVGPSARTYDI 288
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + +++++ +M GC P+ + +V++ +++V++A+++W+ M KG
Sbjct: 289 ILHHLIRAGKTKIAYSVFQKMSCEGCQPSVSTYEIIVRMFCNEDRVDMAIKVWDQMKAKG 348
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIK 227
+ + L + LC KL EA F EM++ G +P F +K
Sbjct: 349 ILPVMHMFSTLINSLCHESKLDEACMYFQEMLDVGIRPPAQLFSNLK 395
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/173 (20%), Positives = 84/173 (48%), Gaps = 1/173 (0%)
Query: 47 SYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEM 106
SY ++I LG + Q + +++ +MK+ G + + R Y A+++++A +M
Sbjct: 41 SYHALIESLGKIKQFNVIWNLVTDMKQKGLL-NKETFALISRRYARARKVKEAVDAFMKM 99
Query: 107 VEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKV 166
+ GL ++ N S + + ++ +M G + + +S L++ +++ +
Sbjct: 100 EKFGLKIESSDVNRLLDTLCKSRQVERAQLVFDKMNKRGFVADIKSYTILLEGWGQEKNL 159
Query: 167 EIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
++++N+M ++GF ++ +L + C + +A + F EM K KPS
Sbjct: 160 SRLMEVYNEMKDEGFEPDVVTYGILINAHCKSRRYDDAIELFHEMEAKNCKPS 212
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 46/236 (19%), Positives = 95/236 (40%), Gaps = 2/236 (0%)
Query: 20 YCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPD 79
Y + R+V++A KM + + ++ L Q ++A+ V +M + G D
Sbjct: 83 YARARKVKEAVDAFMKMEKFGLKIESSDVNRLLDTLCKSRQVERAQLVFDKMNKRGFVAD 142
Query: 80 AAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYC 139
+Y + + K L + +EM ++G P+ TY + S + L+
Sbjct: 143 IKSYTILLEGWGQEKNLSRLMEVYNEMKDEGFEPDVVTYGILINAHCKSRRYDDAIELFH 202
Query: 140 RMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMG 199
M C P+ L+ ++++ AL+ + GF + + C
Sbjct: 203 EMEAKNCKPSPHIYCTLINGLGAEKRLSEALEFFELSKASGFVPEAPTYNAVVGAYCWSE 262
Query: 200 KLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFG--PSM 253
++ + +++ EM + G PS ++ I + A K + ++ KM+ G PS+
Sbjct: 263 RMDDVQRTIDEMRKGGVGPSARTYDIILHHLIRAGKTKIAYSVFQKMSCEGCQPSV 318
>gi|326504802|dbj|BAK06692.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 522
Score = 126 bits (317), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 120/235 (51%), Gaps = 12/235 (5%)
Query: 1 MREMGVKPDIVSYNCLIDVYCK----------DRQVEKAYKIVEKMRDEDISPDVISYTS 50
M + G++P+IV+YN L++ C+ DR V A ++++M D I PDV SY+
Sbjct: 244 MIDHGIEPNIVTYNILLNGICRHASLHPDNRFDRTVNAAENLLKEMNDRGIEPDVTSYSI 303
Query: 51 IIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKG 110
I+ + + + + MK+ G P A Y + I+ RL DA L+ EMV +G
Sbjct: 304 ILHVYSRAHKAELCLCMFRSMKDRGICPTVATYTSVIKCLASCGRLEDAESLLGEMVSEG 363
Query: 111 LSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMG--TGCLPNTQSCMFLVKLCKRQEKVEI 168
+ P+ TYN FF+ + D+ + LY +M + P+ S L+ + + ++ E
Sbjct: 364 VCPSPATYNCFFKEYRGRKDVSGALELYNKMKAPCSPTAPDIHSYNILLGMFIKLDRHET 423
Query: 169 ALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++LWNDM E+ G + +L C K EA + F+EMIEKG P +++F
Sbjct: 424 VMELWNDMCERAVGPDLDSYTLLVHGFCAKEKWREACQFFMEMIEKGFLPQKITF 478
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 100/255 (39%), Gaps = 56/255 (21%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
+G +PD + L+D CK + + A ++ K R P+ YT +I G V + D
Sbjct: 178 LGREPDAQEFTTLLDTLCKYKYPKVAVEVFNK-RKYKYEPNEKMYTILIYGWCKVNRSDM 236
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRD----------ASGLMDEMVEKGLSP 113
A+ LK+M ++G P+ YN + C L A L+ EM ++G+ P
Sbjct: 237 AQKFLKDMIDHGIEPNIVTYNILLNGICRHASLHPDNRFDRTVNAAENLLKEMNDRGIEP 296
Query: 114 NATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLW 173
+ T+Y++ V+ R K E+ L ++
Sbjct: 297 DVTSYSIILHVY-----------------------------------SRAHKAELCLCMF 321
Query: 174 NDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF---------- 223
M ++G + + L G+L +AE EM+ +G PS ++
Sbjct: 322 RSMKDRGICPTVATYTSVIKCLASCGRLEDAESLLGEMVSEGVCPSPATYNCFFKEYRGR 381
Query: 224 RRIKALMELANKQEA 238
+ + +EL NK +A
Sbjct: 382 KDVSGALELYNKMKA 396
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 61/131 (46%), Gaps = 2/131 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRD--EDISPDVISYTSIIGGLGLVGQPD 62
GV P +YNC Y + V A ++ KM+ +PD+ SY ++G + + +
Sbjct: 363 GVCPSPATYNCFFKEYRGRKDVSGALELYNKMKAPCSPTAPDIHSYNILLGMFIKLDRHE 422
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
++ +M E PD +Y + +C ++ R+A EM+EKG P T+ +
Sbjct: 423 TVMELWNDMCERAVGPDLDSYTLLVHGFCAKEKWREACQFFMEMIEKGFLPQKITFETPY 482
Query: 123 RVFYWSNDLRS 133
R ++ LR+
Sbjct: 483 RGLIQADMLRT 493
>gi|449469499|ref|XP_004152457.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Cucumis sativus]
gi|449487784|ref|XP_004157799.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Cucumis sativus]
Length = 502
Score = 126 bits (317), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 125/241 (51%), Gaps = 8/241 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+ P I +YN L+ Y + Q+++A++ +M++ ++ DV++YT+++ G G+VG+
Sbjct: 243 MVERGLTPTITTYNILLKGYFRAGQLKEAWEFFLQMKEREVEIDVVTYTTMVHGFGVVGE 302
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR V EM G P A YNA I+ C + +A + +EMV+KG PN TTYN+
Sbjct: 303 IKRARKVFNEMVGEGILPSTATYNAMIQVLCKKDSVENAVLMFEEMVKKGYVPNLTTYNV 362
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
R + + ++ + RM GC PN Q+ ++ VE L ++ M G
Sbjct: 363 VIRGLFHAGNMDKAMEFIERMKTDGCEPNVQTYNVAIRYFCDAGDVEKGLSMFEKM---G 419
Query: 181 FGSY--ILVSDVLFDLLCDMGK---LVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANK 235
GS + +VL + K LV A K LEM+++G P + +F R+ + L
Sbjct: 420 QGSLPNLDTYNVLISAMFVRKKSEDLVVAGKLLLEMVDRGFIPRKFTFNRVLNGLLLTGN 479
Query: 236 Q 236
Q
Sbjct: 480 Q 480
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 114/214 (53%), Gaps = 4/214 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MRE G D+ S+N ++D+ CK ++VE AY + K+ DV+SY I G L+ +
Sbjct: 173 MREHGCPQDLHSFNTILDILCKSKRVEMAYNNLFKVLRGKFKADVVSYNIIANGWCLIKR 232
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA +VLKEM E G P YN ++ Y A +L++A +M E+ + + TY
Sbjct: 233 TPKALEVLKEMVERGLTPTITTYNILLKGYFRAGQLKEAWEFFLQMKEREVEIDVVTYTT 292
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F +++ + ++ M+G G LP+T + ++++ +++ VE A+ ++ +MV+KG
Sbjct: 293 MVHGFGVVGEIKRARKVFNEMVGEGILPSTATYNAMIQVLCKKDSVENAVLMFEEMVKKG 352
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEK 214
+ + +V+ L G + +A +E IE+
Sbjct: 353 YVPNLTTYNVVIRGLFHAGNMDKA----MEFIER 382
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 114/265 (43%), Gaps = 36/265 (13%)
Query: 12 SYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEM 71
S++ ID+ + R + + +V +MR I P ++ I G+PD+A V M
Sbjct: 114 SFDHAIDIAGRMRDYKTVWALVARMRARRIGPSSKTFAIIAERFVAAGKPDRAIKVFLSM 173
Query: 72 KEYGC-----------------------------------YPDAAAYNAAIRNYCIAKRL 96
+E+GC D +YN +C+ KR
Sbjct: 174 REHGCPQDLHSFNTILDILCKSKRVEMAYNNLFKVLRGKFKADVVSYNIIANGWCLIKRT 233
Query: 97 RDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFL 156
A ++ EMVE+GL+P TTYN+ + ++ + L+ +W + +M + + +
Sbjct: 234 PKALEVLKEMVERGLTPTITTYNILLKGYFRAGQLKEAWEFFLQMKEREVEIDVVTYTTM 293
Query: 157 VKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGH 216
V +++ A +++N+MV +G + + +LC + A F EM++KG+
Sbjct: 294 VHGFGVVGEIKRARKVFNEMVGEGILPSTATYNAMIQVLCKKDSVENAVLMFEEMVKKGY 353
Query: 217 KPSQVSFR-RIKALMELANKQEALQ 240
P+ ++ I+ L N +A++
Sbjct: 354 VPNLTTYNVVIRGLFHAGNMDKAME 378
>gi|357141094|ref|XP_003572081.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
mitochondrial-like [Brachypodium distachyon]
Length = 541
Score = 126 bits (317), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 128/246 (52%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR GV+ +VSY LI C + +KA ++++MR++ I ++++ I+ L L G+
Sbjct: 214 MRLAGVRSTVVSYGTLIKALCMMQHPDKAASLLDEMREQGIEANLLTCNPIVYSLALAGR 273
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +L++ YG P+ + +N+ + YC L AS ++ M+ +G+ P A TYN
Sbjct: 274 FQDAYKLLEKFPLYGVAPNISTFNSLVLGYCKYGDLAGASSVLKAMIGRGILPTAKTYNY 333
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
FF F + ++ NLY +M+ G P+ + L+K+ ++E+ +Q+ +M G
Sbjct: 334 FFVFFAKTCNVELGMNLYNKMVNNGYAPDQITYNLLIKMLCEANRLELVVQMIKEMKTSG 393
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
F S + S +L LLC + EA F +M +G P +++R + ++ E ++
Sbjct: 394 FESDLATSTMLIHLLCRSHQFEEACVEFEDMFRRGLVPQYITYRMLMKEIKRLGLVELVE 453
Query: 241 NLSNKM 246
L+N M
Sbjct: 454 KLTNLM 459
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 96/240 (40%), Gaps = 38/240 (15%)
Query: 14 NCLIDVYCKDRQVEKAYKIVEKMRDED---ISPDVISYTSIIGGLGLVGQPDKARDVLKE 70
N + CK+ A K++++ R E+ +PD +Y ++ G + +K + E
Sbjct: 154 NMTVGALCKEGHPRPAAKLIQRCRHEEGTLPAPDERTYNMLLDGWSSARRLEKVEKLWAE 213
Query: 71 MKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGL------------------- 111
M+ G +Y I+ C+ + A+ L+DEM E+G+
Sbjct: 214 MRLAGVRSTVVSYGTLIKALCMMQHPDKAASLLDEMREQGIEANLLTCNPIVYSLALAGR 273
Query: 112 ----------------SPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMF 155
+PN +T+N + DL + ++ M+G G LP ++ +
Sbjct: 274 FQDAYKLLEKFPLYGVAPNISTFNSLVLGYCKYGDLAGASSVLKAMIGRGILPTAKTYNY 333
Query: 156 LVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
+ VE+ + L+N MV G+ + ++L +LC+ +L + EM G
Sbjct: 334 FFVFFAKTCNVELGMNLYNKMVNNGYAPDQITYNLLIKMLCEANRLELVVQMIKEMKTSG 393
>gi|255558584|ref|XP_002520317.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540536|gb|EEF42103.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 439
Score = 126 bits (317), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 134/247 (54%), Gaps = 3/247 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++G PDIV+Y ++D+ CK +V++A IV++M P Y+ +I G+ +
Sbjct: 185 MVDVGCSPDIVTYGIMVDILCKAGRVDEALDIVKEMDLTICKPTSFIYSVLIHTYGIENR 244
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A D M++ G D AAYNA I +C + ++ +++EM KG+ PN+ T N+
Sbjct: 245 IEDAVDTFLGMEKNGVKADVAAYNALIGAFCKVNKFKNVYRVLNEMDYKGMQPNSRTLNI 304
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKL-CKRQEKVEIALQLWNDMVEK 179
+ ++ ++ RM+ C P+ + ++K+ C+R E +E+AL++W M +K
Sbjct: 305 ILNNLIARGETDEAFRVFRRMIKV-CEPDADTYTMMIKMFCERNE-LEMALKVWKYMKKK 362
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
F + VL + LC+ G + A +MIEKG +PS V+F R++ L+ +++ L
Sbjct: 363 HFVPSMHTFSVLINGLCEEGDVSHACVMLEDMIEKGIRPSGVTFGRLRHLLIKEGREDVL 422
Query: 240 QNLSNKM 246
+ L K+
Sbjct: 423 EFLQQKI 429
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 39/196 (19%), Positives = 86/196 (43%), Gaps = 2/196 (1%)
Query: 42 SPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASG 101
+ V +Y ++I L + Q D++ MK + + +R Y A++L +A
Sbjct: 53 THSVRAYHTMIESLAKIRQYQIMWDLINAMKRKRML-NVETFCIIMRKYARAQKLEEAVY 111
Query: 102 LMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCK 161
+ M + + PN +N F S ++R + ++ +P++++ L++
Sbjct: 112 TFNVMEKYDVPPNLAAFNGLFSALCKSKNVRKAQEIF-DSSKDRFVPDSKTYTILLEGWG 170
Query: 162 RQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQV 221
+ + A +++ +MV+ G I+ ++ D+LC G++ EA EM KP+
Sbjct: 171 KTPNLPKAREIFREMVDVGCSPDIVTYGIMVDILCKAGRVDEALDIVKEMDLTICKPTSF 230
Query: 222 SFRRIKALMELANKQE 237
+ + + N+ E
Sbjct: 231 IYSVLIHTYGIENRIE 246
>gi|125526112|gb|EAY74226.1| hypothetical protein OsI_02107 [Oryza sativa Indica Group]
Length = 540
Score = 126 bits (317), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 124/246 (50%), Gaps = 4/246 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+KPD+V+Y LI +CK + ++A K+ +M + P Y +I GLG + +
Sbjct: 285 MLDAGIKPDVVAYGMLISAFCKSGKCDEAIKVFHEMEESGCMPSPHVYCMLINGLGSMER 344
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + KE G + NA I YC A A ++DEM + G+ PN TY++
Sbjct: 345 LDEALKYFQLSKESGFPMEVPTCNAVIGAYCRALEFHHAFKMVDEMRKSGIGPNTRTYDI 404
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
S + ++NL+ RM GC P + +V + E+V++AL++W M EKG
Sbjct: 405 ILNHLIKSEKIEEAYNLFQRMERDGCEPELNTYTMMVGMFCSNERVDMALKVWKQMKEKG 464
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIK-ALME---LANKQ 236
+ + L + LC +L EA F EM++KG +P F +K AL+E + Q
Sbjct: 465 VLPCMHMFSALINGLCFDNRLEEACVYFQEMLDKGIRPPGQLFSNLKEALVEGGRITLAQ 524
Query: 237 EALQNL 242
E Q L
Sbjct: 525 EVTQRL 530
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 100/236 (42%), Gaps = 1/236 (0%)
Query: 12 SYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEM 71
++ ++ Y + R+V++A + EKM + D+ Y +I L Q KA + KEM
Sbjct: 190 TFKIIVRRYARARKVKEAVETFEKMSSFGLKTDLSDYNWLIDILSKSKQVKKAHAIFKEM 249
Query: 72 KEYGCY-PDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSND 130
K G + PD Y + + K L + EM++ G+ P+ Y + F S
Sbjct: 250 KRKGRFIPDLKTYTVLMEGWGHEKDLLMLKAVYQEMLDAGIKPDVVAYGMLISAFCKSGK 309
Query: 131 LRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDV 190
+ ++ M +GC+P+ L+ E+++ AL+ + E GF + +
Sbjct: 310 CDEAIKVFHEMEESGCMPSPHVYCMLINGLGSMERLDEALKYFQLSKESGFPMEVPTCNA 369
Query: 191 LFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKM 246
+ C + A K EM + G P+ ++ I + + K E NL +M
Sbjct: 370 VIGAYCRALEFHHAFKMVDEMRKSGIGPNTRTYDIILNHLIKSEKIEEAYNLFQRM 425
>gi|326513116|dbj|BAK06798.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 489
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 122/247 (49%), Gaps = 12/247 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMR-----DEDISPDVISYTSIIGGL 55
M E GV P +YN ++ + + Q++ A+ +M+ DE PD++SYT+II GL
Sbjct: 223 MAESGVTPTKTTYNIILKGFFRAGQIQHAWNFFLQMKKRGAKDESCKPDIVSYTTIIHGL 282
Query: 56 GLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNA 115
G+ GQ DKAR + EM + GC P A YNA I+ C + DA + D+MV K PN
Sbjct: 283 GVAGQLDKARKLFDEMSKEGCTPSVATYNALIQVICKKGNVEDAVTVFDDMVRKDYMPNV 342
Query: 116 TTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWND 175
TY + R + + L RM G GC P Q+ L++ + ++E AL L+
Sbjct: 343 VTYTVLIRGLCHVGKIDRAMKLMERMKGEGCEPVVQTYNVLIRYSFEEGEIEKALCLFER 402
Query: 176 MVE-----KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI-KAL 229
M + +Y ++ +F + + A + +EM+E+G+ P + R+ L
Sbjct: 403 MSKGEDCLPNQDTYNIIISAMF-VRKRAEDMATAARMVMEMVERGYLPRRFMLNRVLNGL 461
Query: 230 MELANKQ 236
M N+Q
Sbjct: 462 MLTGNQQ 468
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 93/192 (48%), Gaps = 6/192 (3%)
Query: 37 RDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRL 96
R + D+ + S++ LG KA +++ + E PD YN +C AK
Sbjct: 155 RSHRVVQDLPLFNSLLDALGKSRHASKAASLVRAL-ERRFPPDVVTYNTLADGWCRAKDT 213
Query: 97 RDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG-----CLPNTQ 151
A L+ +M E G++P TTYN+ + F+ + ++ +WN + +M G C P+
Sbjct: 214 SRALDLLRQMAESGVTPTKTTYNIILKGFFRAGQIQHAWNFFLQMKKRGAKDESCKPDIV 273
Query: 152 SCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEM 211
S ++ +++ A +L+++M ++G + + L ++C G + +A F +M
Sbjct: 274 SYTTIIHGLGVAGQLDKARKLFDEMSKEGCTPSVATYNALIQVICKKGNVEDAVTVFDDM 333
Query: 212 IEKGHKPSQVSF 223
+ K + P+ V++
Sbjct: 334 VRKDYMPNVVTY 345
>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 125/260 (48%), Gaps = 2/260 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P++V+YN +ID YCK ++ ++A+ + M + + P++I++ II GL G+
Sbjct: 9 MERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDGR 68
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ +VL EM G PD YN + YC A L EMV GLSPN TY
Sbjct: 69 LKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTS 128
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ +L + + +M G PN ++ ++ +Q ++ A ++ N+M G
Sbjct: 129 LINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSG 188
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
F I+ + L + C +G++ EA +M+ KG P VS+ I + A QE +
Sbjct: 189 FIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTI--ISGFARNQELDR 246
Query: 241 NLSNKMALFGPSMIPKREEY 260
K+ + G S++P Y
Sbjct: 247 AFQMKVEMIGKSVLPDAVTY 266
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 123/257 (47%), Gaps = 4/257 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ P++V+Y LI+ CK + +A + ++M + P+ +YT+II G G D+A
Sbjct: 118 GLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEA 177
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
VL EM G P YNA I +C+ R+ +A GL+ +MV KG+ P+ +Y+
Sbjct: 178 YRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISG 237
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
F + +L ++ + M+G LP+ + L++ Q ++ A ++ +M+
Sbjct: 238 FARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPD 297
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEALQNLS 243
L + C G L +A EMI+KG P V++ I L + A +EA + L
Sbjct: 298 EFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLL- 356
Query: 244 NKMALFGPSMIPKREEY 260
+ LF IP Y
Sbjct: 357 --LKLFYDDSIPSAVTY 371
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 114/241 (47%), Gaps = 15/241 (6%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P IV+YN LI+ +C ++E+A +++ M + + PDV+SY++II G +
Sbjct: 184 MTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQE 243
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + EM PDA Y++ I+ C +RL +A + EM+ L P+ TY
Sbjct: 244 LDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTT 303
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQL-----WND 175
+ DL + +L+ M+ G LP+ + L+ +Q + + A +L ++D
Sbjct: 304 LINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDD 363
Query: 176 MVEKGFGSYILVSD----------VLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR 225
+ L+ + L C G + EA++ F MI K HKP++ +
Sbjct: 364 SIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNV 423
Query: 226 I 226
I
Sbjct: 424 I 424
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 71/159 (44%)
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
KEM+ GC P+ YN I YC KR +A G + M KGL PN T+N+
Sbjct: 6 FKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCR 65
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
L+ + + M G +P+ + LV ++ AL L +MV G ++
Sbjct: 66 DGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVT 125
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
L + +C G L A + F +M +G P++ ++ I
Sbjct: 126 YTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTI 164
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 78/173 (45%), Gaps = 15/173 (8%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + + PD +Y LI+ YCK+ + KA + ++M + PD ++Y +I GL +
Sbjct: 289 MLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQAR 348
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRN---------------YCIAKRLRDASGLMDE 105
+AR +L ++ P A YN I N +C+ + +A + +
Sbjct: 349 SKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFES 408
Query: 106 MVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK 158
M+ K PN YN+ ++ ++ LY M+ +P+T + + LVK
Sbjct: 409 MINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVK 461
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 48/111 (43%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
KP+ YN +I +C+ V KAYK+ ++M D P ++ +++ L G + +
Sbjct: 415 KPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKALFTEGMDGELNE 474
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
V+ ++ DA + + L+ EM + GL P+ T
Sbjct: 475 VIGDILRSCKLTDAELSKVLVEINQKEGNMDMVFNLLTEMAKDGLIPSTGT 525
>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 557
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 130/251 (51%), Gaps = 2/251 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD+V+Y L++ CK ++A K++++MR + +PD+I+Y ++ G+ G+
Sbjct: 182 MLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGR 241
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A + LK + +GC P+ +YN ++ C A+R DA LM EM +KG PN T+N+
Sbjct: 242 VDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNM 301
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + ++ GC PN+ S ++ +Q+K++ A+ MV +G
Sbjct: 302 LISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRG 361
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
I+ + L LC G++ A + ++ +KG P +S+ I L + +EAL
Sbjct: 362 CYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEAL 421
Query: 240 QNLSNKMALFG 250
+ L N+M G
Sbjct: 422 E-LLNEMVTKG 431
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 125/256 (48%), Gaps = 2/256 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G +P+ VSYN ++ C + E A K++ +M + P+V+++ +I L G + A
Sbjct: 256 GCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPA 315
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+VL ++ +YGC P++ +YN + +C K++ A ++ MV +G P+ +YN
Sbjct: 316 MEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTA 375
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
++ ++ L ++ GC P S ++ + K + AL+L N+MV KG
Sbjct: 376 LCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPD 435
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSN 244
I+ + LC ++ EA ++F ++ + G +P+ V + I L+ L ++E +
Sbjct: 436 IITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAI--LLGLCKRRETHNAIDL 493
Query: 245 KMALFGPSMIPKREEY 260
+ + +P Y
Sbjct: 494 FIYMISNGCMPNESTY 509
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 97/195 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PDIVSYN L+ C+ +V+ A +++ +++D+ +P +ISY ++I GL G+
Sbjct: 357 MVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGK 416
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++L EM G PD Y+ C R+ +A ++ + G+ PN YN
Sbjct: 417 TKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNA 476
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ +L+ M+ GC+PN + L++ + V+ A +L ++ +G
Sbjct: 477 ILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEARELLGELCSRG 536
Query: 181 FGSYILVSDVLFDLL 195
S L++ LL
Sbjct: 537 VVSKGLINKAAIRLL 551
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 102/221 (46%), Gaps = 10/221 (4%)
Query: 5 GVKPDIVSYNC--LIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
G++P C LI C + +A +++ PDV++Y +++ G + GQ D
Sbjct: 87 GLEPSAAPGPCAALIKKLCASGRTAEARRVLAA-----CEPDVMAYNAMVAGYCVTGQLD 141
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
AR ++ +M PD+ YN IR C R +A ++D+M+ +G P+ TY +
Sbjct: 142 AARRLVADMPME---PDSYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILL 198
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
+ + + L M GC P+ + +V ++ +V+ A++ + G
Sbjct: 199 EATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCE 258
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ +++ LC + +AEK EM +KG+ P+ V+F
Sbjct: 259 PNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTF 299
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 104/223 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G P++V++N LI C+ VE A ++++++ +P+ +SY I+ +
Sbjct: 287 MSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKK 346
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A ++ M GCYPD +YN + C + A L+ ++ +KG +P +YN
Sbjct: 347 MDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNT 406
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + L M+ G P+ + + R++++E A++ + + + G
Sbjct: 407 VIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMG 466
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + + LC + A F+ MI G P++ ++
Sbjct: 467 IRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTY 509
>gi|359492357|ref|XP_002284592.2| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Vitis vinifera]
Length = 476
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 130/249 (52%), Gaps = 1/249 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +MG PDIV+Y ++D+ CK +V++A IV++M P Y+ ++ G+ +
Sbjct: 206 MVDMGCDPDIVTYGIMVDILCKAGRVDEAVGIVKEMDSSVCKPTSFIYSVLVHTYGIENR 265
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A +M+ D A YNA I +C +L++A +++EM KG+ PN+ T N+
Sbjct: 266 IEDAVYTFLDMERNEIEADVAVYNALIGAFCKVNKLKNAYRVLNEMDCKGIRPNSRTCNI 325
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
D ++ ++ RM+ C P+ + ++K+ +K+E+AL++W M K
Sbjct: 326 ILNSLISCGDTDEAFRVFRRMIKV-CDPDADTYTMMIKMFCENDKLEMALKVWKYMRLKQ 384
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
F + VL + LC G +A EMIEKG +PS V+F ++K L+ +++ L+
Sbjct: 385 FVPSMHTFSVLINGLCKKGNASKACILLEEMIEKGIRPSSVTFGKLKQLLIKEGREDVLE 444
Query: 241 NLSNKMALF 249
L KM L
Sbjct: 445 FLQEKMNLL 453
>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 575
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 120/226 (53%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E GV P++ +YNC+++ CKD + + A+K+ ++MR+ +S ++++Y ++IGGL +
Sbjct: 259 MQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMK 318
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A V+ +MK Y P+ YN I +C +L A L ++ +GLSP+ TYN+
Sbjct: 319 ANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNV 378
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F D + + M G P+ + L+ R + +E A+QL + M E G
Sbjct: 379 LVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELG 438
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ VL C G++ EA + F M+EK +P++V + +
Sbjct: 439 LVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTM 484
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 125/247 (50%), Gaps = 2/247 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MRE GV +IV+YN LI C++ + +A K++++M+ I+P++I+Y ++I G VG+
Sbjct: 294 MRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGK 353
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA + +++K G P YN + +C A+ ++ EM E+G+ P+ TY +
Sbjct: 354 LGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTI 413
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
F S+++ ++ L M G +P+ + L+ C + + E A +L+ MVEK
Sbjct: 414 LIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNE-ASRLFKSMVEK 472
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
++ + + C G A + F +M EK P+ S+ + ++ K +
Sbjct: 473 MLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKERKLKEA 532
Query: 240 QNLSNKM 246
++L KM
Sbjct: 533 EDLVEKM 539
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 117/260 (45%), Gaps = 2/260 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+RE G P++V Y LID CK ++EKA + +M + + +YT +I GL G
Sbjct: 189 LREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGI 248
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ ++ ++M+E+G +P+ YN + C R +DA + DEM E+G+S N TYN
Sbjct: 249 KKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNT 308
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + +M PN + L+ K+ AL L D+ +G
Sbjct: 309 LIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRG 368
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
++ +VL C G A K EM E+G KPS+V++ + ++ E
Sbjct: 369 LSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAI 428
Query: 241 NLSNKMALFGPSMIPKREEY 260
L + M G ++P Y
Sbjct: 429 QLRSSMEELG--LVPDVHTY 446
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 76/153 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+KP V+Y LID + + +E A ++ M + + PDV +Y+ +I G + GQ
Sbjct: 399 MEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQ 458
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A + K M E P+ YN I YC A L +M EK L+PN +Y+
Sbjct: 459 MNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSY 518
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSC 153
RV L+ + +L +M+ +G P+ C
Sbjct: 519 LIRVLCKERKLKEAEDLVEKMIDSGIDPSDTIC 551
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 73/123 (59%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E+G+ PD+ +Y+ LI +C Q+ +A ++ + M ++ + P+ + Y ++I G G
Sbjct: 434 MEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGS 493
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + ++M+E P+ A+Y+ IR C ++L++A L+++M++ G+ P+ T NL
Sbjct: 494 SYRALRLFRDMEEKELAPNVASYSYLIRVLCKERKLKEAEDLVEKMIDSGIDPSDTICNL 553
Query: 121 FFR 123
R
Sbjct: 554 ISR 556
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 88/185 (47%), Gaps = 4/185 (2%)
Query: 44 DVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLM 103
DV S+ +I G G+ +K+ D+L E++E+G P+ Y I C + A L
Sbjct: 162 DVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221
Query: 104 DEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPN--TQSCMFLVKLCK 161
EM + GL N TY + + + + + +Y +M G PN T +C+ + +LCK
Sbjct: 222 FEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCV-MNQLCK 280
Query: 162 RQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQV 221
+ + A +++++M E+G I+ + L LC K EA K +M P+ +
Sbjct: 281 -DGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLI 339
Query: 222 SFRRI 226
++ +
Sbjct: 340 TYNTL 344
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 56/133 (42%), Gaps = 1/133 (0%)
Query: 83 YNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMM 142
Y I Y ++ L + +EMV+KG P + +N S+ W +
Sbjct: 97 YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFF-NES 155
Query: 143 GTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLV 202
+ + S ++K C ++E + L ++ E GF +++ L D C G++
Sbjct: 156 KIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIE 215
Query: 203 EAEKSFLEMIEKG 215
+A+ F EM + G
Sbjct: 216 KAKDLFFEMGKFG 228
>gi|255580386|ref|XP_002531020.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529395|gb|EEF31358.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 530
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 129/258 (50%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G K ++YN ID YCK +I E+M ++ P + + T++I G G+ KA
Sbjct: 267 GFKATSLTYNIRIDAYCKKGYFGDGLRIFEEMEKDNCPPTLETITTLIHGAGVARNIHKA 326
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
R + E+ + PD AYNA I + K + A LMDEM EK + ++ TY+ F
Sbjct: 327 RHLFDEIGKRNLKPDTGAYNALISSLVKCKDIESAMRLMDEMEEKHIGRDSVTYHTIFFG 386
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
ND +LY RM+ +P T++ + L+K ++++ L W M++KG+ +
Sbjct: 387 LMKLNDTEGVCDLYHRMISRDFVPKTRTVVMLMKFFCVNSRLDLGLAFWQYMLDKGYCPH 446
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSN 244
D+L LC G+L+EA + + +E+G + S+V +R ++ ++ ++ + L+ L
Sbjct: 447 GHALDLLVTGLCSRGRLLEAYECSKQFVERGMRMSEVVYRMLERSLQQSDFTDKLRELDQ 506
Query: 245 KMALFGPSMIPKREEYLA 262
+ + P + LA
Sbjct: 507 MIKKLQSVLPPSKGHALA 524
>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
Length = 932
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 127/237 (53%), Gaps = 2/237 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PDI +YN L+D YC+ +++ A ++V +M + ++PDVI+Y +++ GL + ++
Sbjct: 535 GCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEV 594
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++ K M E GC P+ YN I + C +K++ +A L+ EM KGL+P+ ++
Sbjct: 595 MEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITG 654
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCM-FLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
F DL ++ L+ M + +T + ++ Q +++AL+L+++M + G
Sbjct: 655 FCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDP 714
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANK-QEAL 239
VL D C G + + K LE IEKG PS +F R+ + + +K QEA+
Sbjct: 715 DNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEAV 771
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 106/220 (48%), Gaps = 2/220 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G KPD +Y L++ +C+D ++A + + + + P +I Y ++I GL G A
Sbjct: 430 GFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPA 489
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++ EM E GC PD YN I C L DA+ L+ + + KG P+ TYN
Sbjct: 490 LQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDG 549
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGS 183
+ L S+ L RM G P+ + L+ LCK + E+ ++++ M EKG
Sbjct: 550 YCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEV-MEIFKAMTEKGCAP 608
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I+ + + + LC+ K+ EA EM KG P VSF
Sbjct: 609 NIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSF 648
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 110/257 (42%), Gaps = 35/257 (13%)
Query: 5 GVKPDIVSYN-----------------CL------------------IDVYCKDRQVEKA 29
G++PD+V+YN CL ID YCK V A
Sbjct: 360 GLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDA 419
Query: 30 YKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRN 89
+I++ + PD +Y S++ G G PD+A V K+ G P YN I+
Sbjct: 420 NRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKG 479
Query: 90 YCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPN 149
C + A LM+EM EKG P+ TYNL L + +L + GC+P+
Sbjct: 480 LCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPD 539
Query: 150 TQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFL 209
+ LV RQ K++ A++L N M +G ++ + L + LC K E + F
Sbjct: 540 IFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFK 599
Query: 210 EMIEKGHKPSQVSFRRI 226
M EKG P+ +++ I
Sbjct: 600 AMTEKGCAPNIITYNTI 616
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 109/222 (49%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV P++ ++N I CK+ +++A +++ + E + PDV++Y ++I GL + +A
Sbjct: 325 GVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEA 384
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ L +M G P+ YN+ I YC + DA+ ++ + V KG P+ TY
Sbjct: 385 EECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNG 444
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
F D + ++ +G G P+ L+K +Q + ALQL N+M EKG
Sbjct: 445 FCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPD 504
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
I +++ + LC MG L +A + I KG P ++ +
Sbjct: 505 IWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTL 546
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 108/220 (49%), Gaps = 2/220 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P + SYN ++++ + +A+K+ +M+D+ + DV +YT I G+P A +
Sbjct: 188 PSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRIKSFCRTGRPYAALRL 247
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L+ M GC+ +A AY + + A L DEM+E L P+ TT+N
Sbjct: 248 LRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVHALCK 307
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSC-MFLVKLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+ S L+ +++ G PN + +F+ LCK + ++ A++L + +G ++
Sbjct: 308 KGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCK-EGSLDRAVRLLGCVSREGLRPDVV 366
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + LC ++VEAE+ +M+ G +P+ ++ I
Sbjct: 367 TYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSI 406
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 105/224 (46%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ V+ D+ +Y I +C+ + A +++ M + ++Y +++ G G
Sbjct: 216 MKDKKVESDVYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGD 275
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+AR++ EM E PD +N + C + ++ L D+++++G+ PN T+N+
Sbjct: 276 NDRARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNI 335
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEK 179
F + L + L + G P+ + ++ LC++ VE A + + MV
Sbjct: 336 FIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVE-AEECLHKMVNG 394
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
GF + + D C G +V+A + + + KG KP + ++
Sbjct: 395 GFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTY 438
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 103/227 (45%), Gaps = 2/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E + PD+ ++N L+ CK V ++ ++ +K+ + P++ ++ I GL G
Sbjct: 286 MLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGS 345
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A +L + G PD YN I C R+ +A + +MV G PN TYN
Sbjct: 346 LDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNS 405
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ + + + + G P+ + C + C+ + + A+ ++ D + K
Sbjct: 406 IIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDP-DQAMAVFKDGLGK 464
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G I+V + L LC G ++ A + EM EKG KP ++ I
Sbjct: 465 GLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLI 511
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 81/191 (42%), Gaps = 36/191 (18%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G P+I++YN +I+ C ++V +A ++ +M+ + ++PDV+S+ ++I G VG
Sbjct: 601 MTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGD 660
Query: 61 PDKARDVLK------------------------------------EMKEYGCYPDAAAYN 84
D A + + EMK+ GC PD Y
Sbjct: 661 LDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYR 720
Query: 85 AAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGT 144
I +C + + E +EKG P+ TT+ + ++ + + M+
Sbjct: 721 VLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQK 780
Query: 145 GCLPNTQSCMF 155
+P+T + +F
Sbjct: 781 DIVPDTVNTIF 791
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 72/168 (42%)
Query: 56 GLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNA 115
G G+ +A D + M + C P +YNA + A + M +K + +
Sbjct: 166 GRKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDV 225
Query: 116 TTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWND 175
TY + + F + ++ L M GC N + +V + A +L+++
Sbjct: 226 YTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDE 285
Query: 176 MVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
M+E + + L LC G ++E+E+ F +++++G P+ +F
Sbjct: 286 MLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTF 333
>gi|357114607|ref|XP_003559090.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Brachypodium distachyon]
Length = 486
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 131/249 (52%), Gaps = 1/249 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G +PDIV+Y ++D CK +VE+A +V+ M P Y+ ++ G+ +
Sbjct: 232 MLDAGCQPDIVTYGIMVDSLCKTGRVEEAVLVVQDMSSRGCQPTTFIYSVLVHTYGVEMR 291
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A +M++ G PD YNA + +C K+ +A +MD+M G++PN+ T+N+
Sbjct: 292 IEDAVATFLDMEKDGIVPDVVVYNALVTAFCKVKKFENAFRVMDDMEGHGIAPNSRTWNI 351
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++ ++ RM+ C P++ + ++K+ + VE+AL++W M K
Sbjct: 352 ILNKLISLGKDDEAYRVFRRMIKR-CQPDSDTYTMMIKMFCENDNVEMALKVWKYMRLKQ 410
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
F + VL + LCD G++ +A +MIEKG +P +F +++ L+ +++ L+
Sbjct: 411 FLPSMHTFSVLINGLCDKGEVSQACVLLEDMIEKGIRPPGSTFGKLRQLLLKEGRKDVLE 470
Query: 241 NLSNKMALF 249
L +KM +
Sbjct: 471 FLVDKMKIL 479
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 103/219 (47%), Gaps = 2/219 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G I SY+ ++ K RQ + + +V MR E + +V ++ I+ + D+A
Sbjct: 98 GCNHTIRSYHTVVASLAKIRQYQLMWDVVAIMRREGVV-NVETFGIIMRKYARAQKFDEA 156
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
M++YG P+ AA+N+ + C +K +R A + D+M + +P+A TY++
Sbjct: 157 VYTFNIMEKYGVVPNLAAFNSLLGALCKSKNVRKAQEIFDKMNGR-FNPDAKTYSILLEG 215
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + +L +Y M+ GC P+ + +V + +VE A+ + DM +G
Sbjct: 216 WGKAPNLPKMREVYSEMLDAGCQPDIVTYGIMVDSLCKTGRVEEAVLVVQDMSSRGCQPT 275
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ VL ++ +A +FL+M + G P V +
Sbjct: 276 TFIYSVLVHTYGVEMRIEDAVATFLDMEKDGIVPDVVVY 314
>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
Length = 616
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 117/223 (52%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G +PD+V+Y+ +ID CKDR+V +A I M+ + ISP++ +Y S+I GL +
Sbjct: 253 MGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSR 312
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A +L EM P+ ++ I +C + +A G++ M E G+ PN TY+
Sbjct: 313 WREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSS 372
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ + L+ M+ GC P+ S L+ + +++ A QL+N+M+ +G
Sbjct: 373 LMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQG 432
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I+ + L D LC +G+L EA F M+ G+ P ++
Sbjct: 433 LTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTY 475
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 129/245 (52%), Gaps = 1/245 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + + P+IV+++ LI+++CK+ V +A +++ M + + P+V++Y+S++ G L +
Sbjct: 323 MMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAE 382
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR + M GC PD +YN I YC AKR+ +A L +EM+ +GL+P+ +YN
Sbjct: 383 VVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNT 442
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
LR + +L+ M+ G LP+ + L+ +Q + A +L+ M
Sbjct: 443 LIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTY 502
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS-QVSFRRIKALMELANKQEAL 239
+++ ++L D +C L EA K F E+ +G +P+ Q+ I L + EAL
Sbjct: 503 LKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEAL 562
Query: 240 QNLSN 244
+ N
Sbjct: 563 EAFRN 567
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 119/239 (49%), Gaps = 1/239 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G +PD+ +Y +I+ CK + A + KM + PDV++Y++II L +
Sbjct: 218 MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRR 277
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A D+ MK G P+ YN+ I+ C R R+AS +++EM+ + PN T++L
Sbjct: 278 VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 337
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+F ++ + + M G PN + L+ Q +V A +L++ M+ KG
Sbjct: 338 LINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKG 397
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEA 238
+ ++L + C ++ EA++ F EMI +G P VS+ I L +L +EA
Sbjct: 398 CKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREA 456
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 108/221 (48%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
++G++ IV++N LI+ CK + +A ++ + M PDV +YT+II GL +G+
Sbjct: 185 KLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETV 244
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
A + ++M E GC PD Y+ I + C +R+ +A + M KG+SPN TYN
Sbjct: 245 AAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLI 304
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
+ + R + + MM +PN + L+ + ++ V A + M E G
Sbjct: 305 QGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVE 364
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ L + ++VEA K F MI KG KP S+
Sbjct: 365 PNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSY 405
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 118/241 (48%), Gaps = 1/241 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M EMGV+P++V+Y+ L++ Y +V +A K+ + M + PDV SY +I G +
Sbjct: 358 MTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKR 417
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A+ + EM G PD +YN I C RLR+A L M+ G P+ TY++
Sbjct: 418 IGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSI 477
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F L ++ L+ M T PN L+ + ++ A +L++++ +G
Sbjct: 478 LLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQG 537
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
+ + + + LC G L EA ++F M E G P++ S+ I+ ++ ++ A+
Sbjct: 538 LQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAV 597
Query: 240 Q 240
Q
Sbjct: 598 Q 598
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 84/181 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ PDIVSYN LID C+ ++ +A+ + + M PD+ +Y+ ++ G G
Sbjct: 428 MIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGY 487
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA + + M+ P+ YN I C ++ L++A L E+ +GL PN Y
Sbjct: 488 LAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTT 547
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
L + + M GC PN S +++ + + A+QL +M EKG
Sbjct: 548 IINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKG 607
Query: 181 F 181
F
Sbjct: 608 F 608
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 66/117 (56%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ +KP++V YN LID CK R +++A K+ ++ + + P+V YT+II GL G
Sbjct: 498 MQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGL 557
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
D+A + + M+E GC P+ +YN IR + K A L+ EM EKG + T
Sbjct: 558 LDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKGFVADVAT 614
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 101/224 (45%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ PD + + LI+ + + ++V+ + ++ K+ + ++++ ++I GL VG+
Sbjct: 148 MELAGLSPDTYTLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGK 207
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++ +M G PD Y I C A+GL +M E G P+ TY+
Sbjct: 208 FGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYST 267
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+ + +++ M G PN + L++ LC E A + N+M+
Sbjct: 268 IIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWRE-ASAMLNEMMSL 326
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I+ +L ++ C G + EA M E G +P+ V++
Sbjct: 327 NIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTY 370
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 92/219 (42%), Gaps = 3/219 (1%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAY-KIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+P I+ +N L+ K R A + ++M +SPD + +I + + D
Sbjct: 118 RPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLHMLINCFFQLQRVDLGF 177
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
VL ++ + G +N I C + A L D+MV +G P+ TY
Sbjct: 178 SVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGL 237
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ ++ L+ +M GC P+ + ++ LCK +V AL +++ M KG
Sbjct: 238 CKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCK-DRRVNEALDIFSYMKAKGISPN 296
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I + L LC+ + EA EM+ P+ V+F
Sbjct: 297 IFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTF 335
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 61/126 (48%), Gaps = 2/126 (1%)
Query: 102 LMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LC 160
L +M GLSP+ T ++ F+ + +++ +++ G + L+ LC
Sbjct: 144 LSKQMELAGLSPDTYTLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLC 203
Query: 161 KRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQ 220
K K A++L++DMV +G+ + + + LC +G+ V A F +M E G +P
Sbjct: 204 K-VGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDV 262
Query: 221 VSFRRI 226
V++ I
Sbjct: 263 VTYSTI 268
>gi|313851107|ref|NP_001186539.1| pentatricopeptide repeat protein [Zea mays]
gi|312064725|gb|ADQ27447.1| pentatricopeptide repeat protein [Zea mays]
gi|414872960|tpg|DAA51517.1| TPA: hypothetical protein ZEAMMB73_325693 [Zea mays]
Length = 489
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 128/250 (51%), Gaps = 1/250 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G +PDIV+Y ++D CK +VE+A +V+ M P Y+ ++ G+ +
Sbjct: 235 MLAAGCQPDIVTYGIMVDALCKTGRVEEAVCVVQDMSSRGCQPTTFIYSILVHTYGVDMR 294
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A +M++ G PD YNA I +C K+ +A +MD+M G+SPN+ T+N+
Sbjct: 295 IEDAVAAFLDMEKDGIMPDVVVYNALITAFCKVKKFENAFRVMDDMQGHGISPNSRTWNI 354
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++ ++ R M C P++ + ++K+ +K+E+AL++W M K
Sbjct: 355 ILNTLISLGKDDEAYRVF-RSMIKRCKPDSDTYTMMIKMFCENDKIEMALKVWKYMRLKQ 413
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
F + VL + LCD G++ +A +MIEKG +P +F +++ L+ +++ L
Sbjct: 414 FLPSMHTFSVLINGLCDKGEVSQACVLLEDMIEKGIRPPGSTFGKLRQLLLKEGRKDVLD 473
Query: 241 NLSNKMALFG 250
L KM +
Sbjct: 474 FLVEKMKILA 483
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 101/214 (47%), Gaps = 2/214 (0%)
Query: 10 IVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLK 69
+ SY+ ++ K RQ + + +V MR E ++ +V ++ I+ + D+A
Sbjct: 106 VRSYHTVVTSLAKIRQYQLMWDVVAIMRKEGVA-NVETFGIIMRKYARAQKLDEAVYTFN 164
Query: 70 EMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSN 129
M++YG + AA+N+ + C +K +R A + D+M + SP+A TY++ + +
Sbjct: 165 VMEKYGVAHNLAAFNSLLSALCKSKNVRKAQEIFDKMNNR-FSPDAKTYSILLEGWGRAP 223
Query: 130 DLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSD 189
L +Y M+ GC P+ + +V + +VE A+ + DM +G +
Sbjct: 224 SLPKMREVYSDMLAAGCQPDIVTYGIMVDALCKTGRVEEAVCVVQDMSSRGCQPTTFIYS 283
Query: 190 VLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+L ++ +A +FL+M + G P V +
Sbjct: 284 ILVHTYGVDMRIEDAVAAFLDMEKDGIMPDVVVY 317
>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
Length = 847
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 116/222 (52%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PD+ ++N +ID YCK +++ A ++VE+M I+PD I+Y S++ GL G+ +
Sbjct: 354 GYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEV 413
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ +EM GC P+A YN I N+C +L +ASG++ M + GL P+ ++N
Sbjct: 414 NETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHG 473
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
F + DL ++ L+ ++ G + L+ + +++A +++ +M+ KG+
Sbjct: 474 FCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPD 533
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ VL D C + A EM+ KG PS +F R+
Sbjct: 534 LYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRV 575
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 123/255 (48%), Gaps = 2/255 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G PDI +YN +I+ CK + A ++ + PDV ++ ++I G +
Sbjct: 315 MVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLK 374
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A +++ M YG PDA YN+ + C A + ++ + +EM+ KG PNA TYN+
Sbjct: 375 LDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNI 434
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F N L + + RM G +P+T S L+ R ++ A L+ + EKG
Sbjct: 435 LIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKG 494
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEAL 239
+ + ++L + AEK F EMI KG+KP ++R + + AN A
Sbjct: 495 YSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAY 554
Query: 240 QNLSNKMAL-FGPSM 253
+L+ ++ F PSM
Sbjct: 555 VHLAEMVSKGFVPSM 569
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 109/223 (48%), Gaps = 2/223 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PD V+Y LI+ C + VE+A ++ + + +D+ PD++ Y S++ GL G A
Sbjct: 249 GFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHA 308
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
V+ EM E GC+PD YN I C + DA+ +M++ + KG P+ T+N
Sbjct: 309 LQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDG 368
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSC-MFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
+ L S+ L RM G P+ + L LCK + E+ + + +M+ KG
Sbjct: 369 YCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVN-ETFEEMILKGCRP 427
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ ++L + C + +L EA + M + G P +SF +
Sbjct: 428 NAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTL 470
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 111/224 (49%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD +YN +ID YCK +++A ++++ + PD ++Y S+I GL G
Sbjct: 210 MMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGD 269
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A ++ E + PD YN+ ++ C + A +M+EMVE G P+ TYN+
Sbjct: 270 VERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNI 329
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
++ + + + G LP+ + ++ CKR K++ ALQL M
Sbjct: 330 VINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRL-KLDSALQLVERMWMY 388
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G + + + + LC GK E ++F EMI KG +P+ +++
Sbjct: 389 GIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITY 432
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 115/247 (46%), Gaps = 3/247 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ + + N I C+ ++E+A +VE M D I+PDV++Y +++ GL + +A
Sbjct: 145 GMSVNKFTCNIWIRGLCEGGRLEEAVALVESM-DAYIAPDVVTYNTLMRGLCKDSKVQEA 203
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
L+ M GC PD YN I YC L++A+ L+ + + KG P+ TY
Sbjct: 204 AQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLING 263
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
D+ + L+ P+ LVK RQ + ALQ+ N+MVE G
Sbjct: 264 LCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPD 323
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLS 243
I +++ + LC MG + +A + I KG+ P +F I + ALQ L
Sbjct: 324 IWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQ-LV 382
Query: 244 NKMALFG 250
+M ++G
Sbjct: 383 ERMWMYG 389
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 111/262 (42%), Gaps = 7/262 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P +YN ++D ++A+K+ +M ++PD ++T I + G+
Sbjct: 1 MDLFGCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGR 60
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
P A +L+ + E GC AY +R DA L DEM+ + + P+ T+N
Sbjct: 61 PHVALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNN 120
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
D+ S L +++ G N +C ++ ++E A+ L M +
Sbjct: 121 VLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESM-DAY 179
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
++ + L LC K+ EA + M+ +G P ++ I ++ K++ LQ
Sbjct: 180 IAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTI---IDGYCKRDMLQ 236
Query: 241 NLSN--KMALFGPSMIPKREEY 260
+ K A+F +P R Y
Sbjct: 237 EATELLKDAIF-KGFVPDRVTY 257
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 81/186 (43%), Gaps = 8/186 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ PD +S+N LI +C++ ++ AY + +K+ ++ S ++ +IG
Sbjct: 455 MSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLN 514
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A + EM G PD Y + C A + A + EMV KG P+ T+
Sbjct: 515 MQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGR 574
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQ--LWNDMVE 178
++ + + + M+ G +P +V +K EIA L ++++
Sbjct: 575 VLNSLAMNHRVSEAVAIIHIMVRMGVVPE------VVDTILSTDKKEIAAPKILVEELMK 628
Query: 179 KGFGSY 184
KG SY
Sbjct: 629 KGHISY 634
>gi|224160015|ref|XP_002338159.1| predicted protein [Populus trichocarpa]
gi|222871069|gb|EEF08200.1| predicted protein [Populus trichocarpa]
Length = 368
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 117/223 (52%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G +PD+V+Y+ +ID CKDR+V +A I M+ + ISP++ +Y S+I GL +
Sbjct: 36 MGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSR 95
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A +L EM P+ ++ I +C + +A G++ M E G+ PN TY+
Sbjct: 96 WREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSS 155
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ + L+ M+ GC P+ S L+ + +++ A QL+N+M+ +G
Sbjct: 156 LMNGYSLQAEVFEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQG 215
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I+ + L D LC +G+L EA F M+ G+ P ++
Sbjct: 216 LTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTY 258
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 136/271 (50%), Gaps = 21/271 (7%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + + P+IV+++ LI+++CK+ V +A +++ M + + P+V++Y+S++ G L +
Sbjct: 106 MMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAE 165
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR + M GC PD +YN I YC AKR+ +A L +EM+ +GL+P+ +YN
Sbjct: 166 VFEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNT 225
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
LR + +L+ M+ G LP+ + L+ +Q + A +L+ M
Sbjct: 226 LIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTY 285
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+++ ++L D +C L EA K F E+ +G +P+ ++ L E+ + AL
Sbjct: 286 LKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNMKHWK----LFEIWKRMAAL- 340
Query: 241 NLSNKMALFGPSMIPKREEYLAEMSASDSFS 271
R +L +S+ D FS
Sbjct: 341 ----------------RMNFLIMLSSEDFFS 355
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 119/235 (50%), Gaps = 1/235 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G +PD+ +Y +I+ CK + A + +KM + PDV++Y++II L + ++A
Sbjct: 5 GYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEA 64
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
D+ MK G P+ YN+ I+ C R R+AS +++EM+ + PN T++L +
Sbjct: 65 LDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINI 124
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
F ++ + + M G PN + L+ Q +V A +L++ M+ KG
Sbjct: 125 FCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPD 184
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEA 238
+ ++L + C ++ EA++ F EMI +G P VS+ I L +L +EA
Sbjct: 185 VFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREA 239
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 50/118 (42%)
Query: 106 MVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEK 165
MV +G P+ TY + ++ L+ +M GC P+ + ++ + +
Sbjct: 1 MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60
Query: 166 VEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
V AL +++ M KG I + L LC+ + EA EM+ P+ V+F
Sbjct: 61 VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTF 118
>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 762
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 112/226 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P++V+YN LID YCK ++++A+ +++ M + + P++ISY II GL G
Sbjct: 240 MERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGS 299
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++L+EM G PD YN + YC A + EMV G+SP+ TY
Sbjct: 300 MKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTA 359
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ +L + + +M G PN ++ L+ RQ + A ++ N+M E G
Sbjct: 360 LINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESG 419
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
F ++ + C + ++ EA EM+EKG P VS+ I
Sbjct: 420 FSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTI 465
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 123/245 (50%), Gaps = 23/245 (9%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G P +V+YN I +C ++E+A +V++M ++ ++PDV+SY++II G G+
Sbjct: 415 MTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGE 474
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + +EM E G PDA Y++ I+ C +RL +A L EM++ GL P+ TY
Sbjct: 475 LDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTT 534
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ DL + +L+ M+ G LP+ + L+ +Q + A +L ++ +
Sbjct: 535 LINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEE 594
Query: 181 FGSYILVSDVLFDLL-------------------CDMGKLVEAEKSFLEMIEKGHKPSQV 221
+ SDV +D L C G + EA++ F M+E+ HKP +
Sbjct: 595 ----SVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEA 650
Query: 222 SFRRI 226
+ I
Sbjct: 651 VYNVI 655
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 120/236 (50%), Gaps = 3/236 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV P +V+Y LI+ CK R + +A + ++MR + P+ +YT++I G G ++A
Sbjct: 349 GVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEA 408
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+L EM E G P YNA I +C+ +R+ +A G++ EMVEKGL+P+ +Y+
Sbjct: 409 YRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISG 468
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGS 183
F +L ++ + M+ G P+ + L++ LC+ + E A L +M++ G
Sbjct: 469 FCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTE-ACDLSQEMLDMGLPP 527
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEA 238
L + C G L +A EMI KG P V++ I L + A +EA
Sbjct: 528 DEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREA 583
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 115/223 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G++P+ +Y LID + + + +AY+I+ +M + SP V++Y + I G ++ +
Sbjct: 380 MRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLER 439
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A V++EM E G PD +Y+ I +C L A + EMVEKG+SP+A TY+
Sbjct: 440 MEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSS 499
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L + +L M+ G P+ + L+ + + AL L ++M+ KG
Sbjct: 500 LIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKG 559
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
F + VL + L + EA++ ++I + PS V++
Sbjct: 560 FLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTY 602
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 103/224 (45%), Gaps = 2/224 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEK--AYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
G P ++SYN ++D + R K A ++ +M +SP+V +Y +I G VG+
Sbjct: 172 GFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYREMIRSRVSPNVYTYNILIRGFCSVGELQ 231
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
K EM+ GC P+ YN I YC R+ +A GL+ M KG+ PN +YN+
Sbjct: 232 KGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVII 291
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
++ +W + M G P+ + L+ ++ AL + +MV G
Sbjct: 292 NGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVS 351
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ L + +C L A + F +M +G +P++ ++ +
Sbjct: 352 PSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTL 395
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 100/218 (45%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
V P++ +YN LI +C +++K +M P+V++Y ++I +G+ D+A
Sbjct: 210 VSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAF 269
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+LK M G P+ +YN I C +++A +++EM KG +P+ TYN +
Sbjct: 270 GLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGY 329
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ + ++ M+ G P+ + L+ + + A++ ++ M +G
Sbjct: 330 CKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNE 389
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
L D G L EA + EM E G PS V++
Sbjct: 390 RTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTY 427
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 83/173 (47%), Gaps = 15/173 (8%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +MG+ PD +Y LI+ YC + + KA + ++M + PD ++Y+ +I GL +
Sbjct: 520 MLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQAR 579
Query: 61 PDKARDVLKEMKEYGCYPDAAAYN---------------AAIRNYCIAKRLRDASGLMDE 105
+A+ +L ++ P Y+ A I+ +C+ + +A + +
Sbjct: 580 TREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFES 639
Query: 106 MVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK 158
MVE+ P YN+ +L ++NLY M+ +G +P+T + + L+K
Sbjct: 640 MVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIK 692
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 95/239 (39%), Gaps = 8/239 (3%)
Query: 13 YNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK--ARDVLKE 70
++ ++ Y +++A + + P V+SY S++ + K A +V +E
Sbjct: 145 FDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYRE 204
Query: 71 MKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSND 130
M P+ YN IR +C L+ G EM G PN TYN +
Sbjct: 205 MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 264
Query: 131 LRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDV 190
+ ++ L M G PN S ++ R+ ++ A ++ +M KGF + +
Sbjct: 265 IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 324
Query: 191 LFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALF 249
L + C G +A EM+ G PS V++ L N +NL+ M F
Sbjct: 325 LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTY------TALINSMCKARNLNRAMEFF 377
>gi|356517665|ref|XP_003527507.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Glycine max]
Length = 564
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 130/251 (51%), Gaps = 1/251 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G+KP++ +Y+ +ID C+ Q+ +A+ + +M D P+ +++ S++ G+
Sbjct: 308 MKMAGIKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGCDPNAVTFNSLMRVHVKAGR 367
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+K V +MK GC D +YN I ++C + L +A+ +++ MV+KG++PNA+T+N
Sbjct: 368 TEKVLKVYNQMKRLGCPADTISYNFIIESHCRDENLEEAAKILNLMVKKGVAPNASTFNF 427
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F +D+ + +Y RM C PNT + L+++ ++ L++ +M E
Sbjct: 428 IFGCIAKLHDVNGAHRMYARMKELNCQPNTLTYNILMRMFAESRSTDMVLKMKKEMDESQ 487
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMI-EKGHKPSQVSFRRIKALMELANKQEAL 239
+ +L + CDM A K +EM+ EK +P+ + + L+ A + +
Sbjct: 488 VEPNVNTYRILISMFCDMKHWNNAYKLMMEMVEEKCLRPNLSVYETVLELLRKAGQLKKH 547
Query: 240 QNLSNKMALFG 250
+ L +KM G
Sbjct: 548 EELVDKMVARG 558
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 108/223 (48%), Gaps = 1/223 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G PD+V+++ +I CK R+ +A + ++ PDV+ YTS++ G G
Sbjct: 239 MEDYGCTPDMVAFSIVISSLCKKRRANEAQSFFDSLKHR-FEPDVVVYTSLVHGWCRAGD 297
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA +V +MK G P+ Y+ I + C ++ A + EM++ G PNA T+N
Sbjct: 298 ISKAEEVFSDMKMAGIKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGCDPNAVTFNS 357
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
RV + +Y +M GC +T S F+++ R E +E A ++ N MV+KG
Sbjct: 358 LMRVHVKAGRTEKVLKVYNQMKRLGCPADTISYNFIIESHCRDENLEEAAKILNLMVKKG 417
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ +F + + + A + + M E +P+ +++
Sbjct: 418 VAPNASTFNFIFGCIAKLHDVNGAHRMYARMKELNCQPNTLTY 460
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/248 (20%), Positives = 103/248 (41%), Gaps = 34/248 (13%)
Query: 13 YNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMK 72
YN ++D+ K RQ + A+ +++ M+ + V ++++++ G +A M+
Sbjct: 181 YNEMLDLAGKLRQFDLAWHVIDLMKSRGVEITVHTFSALVRRYVRAGLAAEAVHAFNRME 240
Query: 73 EYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEK----------------------- 109
+YGC PD A++ I + C +R +A D + +
Sbjct: 241 DYGCTPDMVAFSIVISSLCKKRRANEAQSFFDSLKHRFEPDVVVYTSLVHGWCRAGDISK 300
Query: 110 -----------GLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK 158
G+ PN TY++ + + +++ M+ GC PN + L++
Sbjct: 301 AEEVFSDMKMAGIKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGCDPNAVTFNSLMR 360
Query: 159 LCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
+ + + E L+++N M G + + + + + C L EA K M++KG P
Sbjct: 361 VHVKAGRTEKVLKVYNQMKRLGCPADTISYNFIIESHCRDENLEEAAKILNLMVKKGVAP 420
Query: 219 SQVSFRRI 226
+ +F I
Sbjct: 421 NASTFNFI 428
>gi|326520119|dbj|BAK03984.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 485
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 132/249 (53%), Gaps = 1/249 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G +PDIV+Y ++D CK +VE+A +V+ M P Y+ ++ G+ +
Sbjct: 231 MLDAGCQPDIVTYGIMVDSLCKTGRVEEAVFVVQDMTSRGCQPTTFIYSVLVHTYGVEMR 290
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A +M++ G PD YNA + +C K+ +A +MD+M G++PN+ T+N+
Sbjct: 291 IEDAVATFLDMQKDGIVPDVVVYNALVTAFCKVKKFDNAFRVMDDMEGHGITPNSRTWNI 350
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++ ++ RM+ C P++ + ++K+ +++E+AL++W M K
Sbjct: 351 ILNKLISLGKDDEAYRVFRRMIKR-CQPDSDTYTMMIKMFCENDRLEMALKVWKYMRLKQ 409
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
F + VL + LCD G++ +A +MIEKG +P +F +++ L+ +++ L+
Sbjct: 410 FLPSMHTFSVLINGLCDKGEVSQACVLLEDMIEKGIRPPGSTFGKLRQLLLKEGRKDVLE 469
Query: 241 NLSNKMALF 249
L +KM +
Sbjct: 470 FLVDKMKIL 478
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 113/254 (44%), Gaps = 2/254 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV P++ ++N L+ CK + V KA +I E+M SPD +Y+ ++ G G
Sbjct: 162 MEKYGVVPNLAAFNSLLCALCKSKNVRKAQEIFEQMNGR-FSPDAKTYSILLEGWGRAPN 220
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
K R V +M + GC PD Y + + C R+ +A ++ +M +G P Y++
Sbjct: 221 LPKMRKVYSDMLDAGCQPDIVTYGIMVDSLCKTGRVEEAVFVVQDMTSRGCQPTTFIYSV 280
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + + M G +P+ LV + +K + A ++ +DM G
Sbjct: 281 LVHTYGVEMRIEDAVATFLDMQKDGIVPDVVVYNALVTAFCKVKKFDNAFRVMDDMEGHG 340
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+++ + L +GK EA + F MI++ S IK E + AL+
Sbjct: 341 ITPNSRTWNIILNKLISLGKDDEAYRVFRRMIKRCQPDSDTYTMMIKMFCENDRLEMALK 400
Query: 241 NLSN-KMALFGPSM 253
++ F PSM
Sbjct: 401 VWKYMRLKQFLPSM 414
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 106/223 (47%), Gaps = 4/223 (1%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
R G + S++ ++ K RQ + + +V MR + + +V ++ I+ +
Sbjct: 94 RGGGCAHTVRSFHTVVASLAKIRQYQLMWDVVAIMRRQGVV-NVETFGIIMRKYARAQKV 152
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
D+A M++YG P+ AA+N+ + C +K +R A + ++M + SP+A TY++
Sbjct: 153 DEAVYTFNVMEKYGVVPNLAAFNSLLCALCKSKNVRKAQEIFEQMNGR-FSPDAKTYSIL 211
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEKG 180
+ + +L +Y M+ GC P+ + +V LCK +VE A+ + DM +G
Sbjct: 212 LEGWGRAPNLPKMRKVYSDMLDAGCQPDIVTYGIMVDSLCK-TGRVEEAVFVVQDMTSRG 270
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ VL ++ +A +FL+M + G P V +
Sbjct: 271 CQPTTFIYSVLVHTYGVEMRIEDAVATFLDMQKDGIVPDVVVY 313
>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 126/246 (51%), Gaps = 3/246 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + + P+I ++N L+D CK+ +V +A + + M + + PDV++Y+S++ G L +
Sbjct: 296 MTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRME 355
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR + M GC PDA +YN I+ YC AKR+ +A L +EM+ +GL+P+ YN
Sbjct: 356 IVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNT 415
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEK 179
LR + +L+ M G LP+ + M L CK + + A +L+ M
Sbjct: 416 LIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCK-EGYLGKAFRLFRVMQST 474
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS-QVSFRRIKALMELANKQEA 238
I + ++L D +C G L +A K F E+ +G P+ Q+ I L + EA
Sbjct: 475 YLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEA 534
Query: 239 LQNLSN 244
L+ N
Sbjct: 535 LEAFRN 540
Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 115/223 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G +P++V+YN LID CKD+ V +A I M+ + ISPD+ +Y S+I GL +
Sbjct: 226 MEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRR 285
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A +L EM P+ +N + C ++ +A G+ M E G+ P+ TY+
Sbjct: 286 WKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSS 345
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ + L+ M+ GC P+ S L+K + ++++ A QL+N+M+ +G
Sbjct: 346 LMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQG 405
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + L LC +G+L EA+ F M G+ P ++
Sbjct: 406 LTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTY 448
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 104/227 (45%), Gaps = 2/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ PDI + + LID + ++V+ A+ + KM + PD +++ ++I GL VG+
Sbjct: 121 MELAGLSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGK 180
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + + + GC P Y I C A+GL +M E G PN TYN+
Sbjct: 181 FAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNI 240
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+ + +++ M P+ + L++ LC + E A L N+M
Sbjct: 241 LIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKE-ASALLNEMTSL 299
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
I +VL D +C GK+ EA+ F M E G +P V++ +
Sbjct: 300 NIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSL 346
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 108/224 (48%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++G++PD V++N LI+ CK + +A + + P V +YT+II GL +G+
Sbjct: 156 MIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGE 215
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A + K+M+E GC P+ YN I + C K + +A + M K +SP+ TYN
Sbjct: 216 TTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNS 275
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + L M +PN + LV ++ KV A ++ M E G
Sbjct: 276 LIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMG 335
Query: 181 FGSYILV-SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ S +++ M ++VEA K F MI KG KP S+
Sbjct: 336 VEPDVVTYSSLMYGYSLRM-EIVEARKLFDAMITKGCKPDAFSY 378
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 112/241 (46%), Gaps = 1/241 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M EMGV+PD+V+Y+ L+ Y ++ +A K+ + M + PD SY +I G +
Sbjct: 331 MTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKR 390
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A+ + EM G PD YN I C RLR+A L M G P+ TY++
Sbjct: 391 IDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSM 450
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F L ++ L+ M T P+ L+ + ++ A +L++++ +G
Sbjct: 451 LLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQG 510
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
+ + + + LC G L EA ++F M G P + S+ I+ ++ ++ A
Sbjct: 511 LLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAA 570
Query: 240 Q 240
Q
Sbjct: 571 Q 571
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 80/181 (44%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ PD V+YN LI C+ ++ +A + + M PD+ +Y+ ++ G G
Sbjct: 401 MIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGY 460
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA + + M+ PD A YN I C L+DA L E+ +GL PN Y
Sbjct: 461 LGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTT 520
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
L + + M G GC P+ S +++ + + A QL +M ++G
Sbjct: 521 IINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRG 580
Query: 181 F 181
F
Sbjct: 581 F 581
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 62/117 (52%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ +KPDI YN LID CK ++ A K+ ++ + + P+V YT+II L G
Sbjct: 471 MQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGL 530
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
D+A + + M+ GC PD +YN IR + K A+ L+ EM ++G A T
Sbjct: 531 LDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRGFVAEAGT 587
>gi|147789025|emb|CAN75780.1| hypothetical protein VITISV_012424 [Vitis vinifera]
Length = 515
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 131/253 (51%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G KP+ V+YN ID YCK +++E+M + P + + T++I G G+ +A
Sbjct: 250 GFKPNSVTYNIRIDAYCKKGCFGDGLRLLEEMEKANCPPTLETITTLIHGAGVAQNISRA 309
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
R++ E+ PD YNA + + ++ ++ A LMDEM E+G+ ++ TY+ FR
Sbjct: 310 RELFNEISIRNLQPDIGVYNAFMSSLIRSREVQSALMLMDEMEEEGIGHDSMTYHTMFRG 369
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
SN + LY +M+ +P T++ + L+K + ++++++L LW ++++G+ +
Sbjct: 370 LMRSNGIEGVSELYHKMIRRNFVPKTRTIVMLMKWFCQNQQLDLSLDLWGYLIDRGYCPH 429
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSN 244
D+L LC GK+ EA + + +E+G S+ FR ++ + A + E L L
Sbjct: 430 GHALDLLVTGLCSHGKVKEAVECAKQTLERGRPMSEGVFRMLERYLVEAGEGEMLWKLDQ 489
Query: 245 KMALFGPSMIPKR 257
+ + P R
Sbjct: 490 MIKKLHTVLPPSR 502
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 44/248 (17%), Positives = 97/248 (39%), Gaps = 50/248 (20%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P ++ + + + R +KA++++E++ + P +++ S+ L + + D
Sbjct: 110 PSSDAFEKTLHILTRMRYFDKAWELMEEI--QQTHPSLLTLKSMSIMLSRIAKFQSYEDT 167
Query: 68 LKEMKE------YGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
L+ +G A +N +R +C +++++A + +M + SPN T N+
Sbjct: 168 LEAFGRMEKNVFFGREFGANEFNVLLRAFCTQRQMKEARSVFHKMHSR-FSPNTKTMNIL 226
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
F S D+ + VE+ +++M+ +GF
Sbjct: 227 LLGFKESGDVTA--------------------------------VEL---FYHEMIRRGF 251
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQN 241
+ ++ D C G + + LE +EK + P ++ + L + QN
Sbjct: 252 KPNSVTYNIRIDAYCKKGCFGDGLR-LLEEMEKANCPPT-----LETITTLIHGAGVAQN 305
Query: 242 LSNKMALF 249
+S LF
Sbjct: 306 ISRARELF 313
>gi|225460540|ref|XP_002272860.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61360
[Vitis vinifera]
gi|296081020|emb|CBI18524.3| unnamed protein product [Vitis vinifera]
Length = 513
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 131/253 (51%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G KP+ V+YN ID YCK +++E+M + P + + T++I G G+ +A
Sbjct: 250 GFKPNSVTYNIRIDAYCKKGCFGDGLRLLEEMEKANCPPTLETITTLIHGAGVAQNISRA 309
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
R++ E+ PD YNA + + ++ ++ A LMDEM E+G+ ++ TY+ FR
Sbjct: 310 RELFNEISIRNLQPDIGVYNAFMSSLIRSREVQSALMLMDEMEEEGIGHDSMTYHTMFRG 369
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
SN + LY +M+ +P T++ + L+K + ++++++L LW ++++G+ +
Sbjct: 370 LMRSNGIEGVSELYHKMIRRNFVPKTRTIVMLMKWFCQNQQLDLSLDLWGYLIDRGYCPH 429
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSN 244
D+L LC GK+ EA + + +E+G S+ FR ++ + A + E L L
Sbjct: 430 GHALDLLVTGLCSHGKVKEAVECAKQTLERGRPMSEGVFRMLERYLVEAGEGEMLWKLDQ 489
Query: 245 KMALFGPSMIPKR 257
+ + P R
Sbjct: 490 MIKKLHTVLPPSR 502
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 44/248 (17%), Positives = 97/248 (39%), Gaps = 50/248 (20%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P ++ + + + R +KA++++E++ + P +++ S+ L + + D
Sbjct: 110 PSSDAFEKTLHILTRMRYFDKAWELMEEI--QQTHPSLLTLKSMSIMLSRIAKFQSYEDT 167
Query: 68 LKEMKE------YGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
L+ +G A +N +R +C +++++A + +M + SPN T N+
Sbjct: 168 LEAFGRMEKNVFFGREFGANEFNVLLRAFCTQRQMKEARSVFHKMHSR-FSPNTKTMNIL 226
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
F S D+ + VE+ +++M+ +GF
Sbjct: 227 LLGFKESGDVTA--------------------------------VEL---FYHEMIRRGF 251
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQN 241
+ ++ D C G + + LE +EK + P ++ + L + QN
Sbjct: 252 KPNSVTYNIRIDAYCKKGCFGDGLR-LLEEMEKANCPPT-----LETITTLIHGAGVAQN 305
Query: 242 LSNKMALF 249
+S LF
Sbjct: 306 ISRARELF 313
>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 618
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 121/225 (53%), Gaps = 2/225 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV+PD+V+++ LID CK+ +V +A K++E M I P++I+Y S+I G +VG
Sbjct: 298 MVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGD 357
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ AR++ M G PD +Y I YC ++++A L +EM++ G SPN TTY
Sbjct: 358 LNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGT 417
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQ-SCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ + + + L+ M G N+Q +FL LCK E A++L+N++
Sbjct: 418 LLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFE-AMELFNELKSY 476
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
F I L D LC GKL A + F ++ ++G +P V++
Sbjct: 477 NFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYN 521
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 109/202 (53%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
KP +++Y+ +ID CK + ++A ++ E+M+ + + PDVISY+++I G G+ D+++
Sbjct: 234 KPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKH 293
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
+ EM + G PD ++ I C ++ +A L++ M+++G+ PN TYN F
Sbjct: 294 LFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFC 353
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
DL S+ L+ M G P+ S L+ + KV+ A+ L+N+M++ G +
Sbjct: 354 MVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVT 413
Query: 187 VSDVLFDLLCDMGKLVEAEKSF 208
L L GK+ +A+K F
Sbjct: 414 TYGTLLKGLFQKGKVGDAKKLF 435
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 123/259 (47%), Gaps = 43/259 (16%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDE------DISPDVISYTSIIGG 54
M+++G P+ V+Y LI C+ V A K+ ++M ++ + P VI+Y+ II G
Sbjct: 187 MQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDG 246
Query: 55 LGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPN 114
L VG+ D+A+++ +EMK G PD +Y+ I +C A + + L DEMV++G+ P+
Sbjct: 247 LCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPD 306
Query: 115 ATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWN 174
T+++ LCK + KV A +L
Sbjct: 307 MVTFSVLIDT----------------------------------LCK-EGKVTEAKKLLE 331
Query: 175 DMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELA 233
M+++G ++ + L D C +G L A + FL M KG +P ++S+ I +
Sbjct: 332 VMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTW 391
Query: 234 NKQEALQNLSNKMALFGPS 252
+EA+ NL N+M G S
Sbjct: 392 KVKEAM-NLYNEMLQVGKS 409
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 72/117 (61%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
++ K +I +Y+CLID CK ++E A+++ EK+ E + PDV++Y +I G VGQ
Sbjct: 473 LKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQ 532
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
D A + ++M+E GC PD AYN + +C +L + L+ +MV+K +SPNA +
Sbjct: 533 VDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAAS 589
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 116/257 (45%), Gaps = 20/257 (7%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ P++++YN LID +C + A ++ M + + PD ISYT++I G +
Sbjct: 333 MIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWK 392
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++ EM + G P+ Y ++ ++ DA L M G+S N+ Y +
Sbjct: 393 VKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGI 452
Query: 121 F----------FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIAL 170
F F N+L+ S+N + CL + LCK K+E A
Sbjct: 453 FLDGLCKNDCLFEAMELFNELK-SYNFKLNIENYSCL--------IDGLCKAG-KLETAW 502
Query: 171 QLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALM 230
+L+ + ++G ++ +++ C +G++ A F +M E G P +++ +
Sbjct: 503 ELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGF 562
Query: 231 ELANKQEALQNLSNKMA 247
NK E + L +KM
Sbjct: 563 CEGNKLEEVIKLLHKMV 579
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 101/222 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G++PD +SY LI+ YCK +V++A + +M SP+V +Y +++ GL G+
Sbjct: 368 MPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGK 427
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A+ + MK YG ++ Y + C L +A L +E+ N Y+
Sbjct: 428 VGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSC 487
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L ++W L+ ++ G P+ + ++ + +V+ A L+ M E G
Sbjct: 488 LIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENG 547
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
I+ + L C+ KL E K +M++K P+ S
Sbjct: 548 CTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAAS 589
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 106/244 (43%), Gaps = 10/244 (4%)
Query: 21 CKDRQVE--KAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYP 78
CK + +A+ + M P + S+ ++GGL + + + EM+ G P
Sbjct: 65 CKTGNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSP 124
Query: 79 DAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLY 138
D + C R+ +A M ++ +G PN TY + + + + L+
Sbjct: 125 DLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLF 184
Query: 139 CRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG--FG----SYILVSDVLF 192
RM GC PN + L+K + V IAL+L +M+ +G ++ ++
Sbjct: 185 LRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIII 244
Query: 193 DLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFG-- 250
D LC +G+ EA++ F EM +G P +S+ + A K + ++L ++M G
Sbjct: 245 DGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQ 304
Query: 251 PSMI 254
P M+
Sbjct: 305 PDMV 308
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 101/223 (45%), Gaps = 8/223 (3%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P I S+N L+ K + + + +MR +SPD+ + + + L V + +A
Sbjct: 89 PPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILANCLCNVNRVSEALAA 148
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
+ + G P+ Y I+ C+ R+ +A+ L M + G +PNA TY +
Sbjct: 149 MAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQ 208
Query: 128 SNDLRSSWNLYCRMM------GTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKG 180
+ ++ + L+ M+ G C P + ++ LCK + E A +L+ +M +G
Sbjct: 209 TGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDE-AKELFEEMKAQG 267
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ L C GK +++ F EM+++G +P V+F
Sbjct: 268 MIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTF 310
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 80/165 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ GV + Y +D CK+ + +A ++ +++ + ++ +Y+ +I GL G+
Sbjct: 438 MKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGK 497
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A ++ +++ + G PD YN I +C ++ +A+ L ++M E G +P+ YN
Sbjct: 498 LETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNT 557
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEK 165
F N L L +M+ PN SC +V + + EK
Sbjct: 558 LLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCKDEK 602
>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
Length = 836
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 130/262 (49%), Gaps = 37/262 (14%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++GV P++V+YN +I CK ++++AY+ EKM E +SP +I+Y+ I GL + +
Sbjct: 282 MEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFINGLIKLEK 341
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A VLKEM E G P+ YN I YC + +A + D+M+ KG+SPN+ T N
Sbjct: 342 IDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNS 401
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTG---------------CL------------------ 147
+ F S+ + + N+ M+G G CL
Sbjct: 402 LIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRN 461
Query: 148 --PNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEA 204
PN LV LCK ++ E A++LW ++ KGF I+ S+ L LC G + E
Sbjct: 462 LRPNDGLLTTLVSGLCKAGKQGE-AVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQET 520
Query: 205 EKSFLEMIEKGHKPSQVSFRRI 226
K +M+E+G ++++ +
Sbjct: 521 LKLLRDMLERGLVFDRITYNTL 542
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 71/121 (58%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ GV +Y+ L+ C V+ A ++++MR E + P+V+ YT+IIGG +GQ
Sbjct: 667 MKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQ 726
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+K VL+EM + +P+ Y I +C + ++A+ L++EM EKG+ P+A TYN
Sbjct: 727 MNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNA 786
Query: 121 F 121
F
Sbjct: 787 F 787
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 124/282 (43%), Gaps = 35/282 (12%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E+G P+ V YN LID YCK + +A KI + M + ISP+ ++ S+I G Q
Sbjct: 352 MSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQ 411
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKR---------------LRDASGLMDE 105
+A +VL+EM G + +++ I C+ R LR GL+
Sbjct: 412 IGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTT 471
Query: 106 MVE--------------------KGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
+V KG PN T N + +++ + L M+ G
Sbjct: 472 LVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERG 531
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
+ + + L+ C ++ KV+ +L +MV+KG I ++L LC+ K+ EA
Sbjct: 532 LVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEAS 591
Query: 206 KSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMA 247
+ + E + G+ P+ ++ + ANK E +NL N++
Sbjct: 592 RLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELV 633
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 113/262 (43%), Gaps = 43/262 (16%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+ D ++YN LI CK+ +V++ +++ E+M + I PD+ ++ ++ GL +
Sbjct: 527 MLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADK 586
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + E K+ G P+ Y I YC A ++ + L++E+V K L N+ YN
Sbjct: 587 IDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNS 646
Query: 121 FFRVFYWSNDLRSSWNL---------------YCRMMGTGC------------------- 146
R + + ++ +++ L Y +M C
Sbjct: 647 LIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEG 706
Query: 147 -LPNTQSCMFLV----KLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKL 201
LPN ++ KL + KV I LQ +M ++ D C +GK
Sbjct: 707 LLPNVVCYTTIIGGYSKL-GQMNKVNIVLQ---EMSSHNIHPNKFTYTIMIDGFCKLGKT 762
Query: 202 VEAEKSFLEMIEKGHKPSQVSF 223
EA K EM EKG P V++
Sbjct: 763 KEAAKLLNEMTEKGILPDAVTY 784
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 102/236 (43%), Gaps = 15/236 (6%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
++ G P++ +Y +ID YCK +VE+ ++ ++ + + + + Y S+I + G
Sbjct: 598 KKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNM 657
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
+ A + +MK G A Y++ + C + DA L+DEM ++GL PN Y
Sbjct: 658 NAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTI 717
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
+ + + M PN + ++ + K + A +L N+M EKG
Sbjct: 718 IGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGI 777
Query: 182 GSYILVSDVLFDLLCDMGKLVEA---------------EKSFLEMIEKGHKPSQVS 222
+ + + LC GK+ EA E ++ +I+ H+PS +
Sbjct: 778 LPDAVTYNAFTNGLCKEGKVEEAFKVCDEMSSGAVCLDEITYTTLIDGCHQPSTAT 833
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 62/118 (52%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G+ P++V Y +I Y K Q+ K ++++M +I P+ +YT +I G +G+
Sbjct: 702 MRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGK 761
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
+A +L EM E G PDA YNA C ++ +A + DEM + + TY
Sbjct: 762 TKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKVCDEMSSGAVCLDEITY 819
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 103/222 (46%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ P + + L+ K +++K+Y++ + + I PDV ++++I + D A
Sbjct: 216 GLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMINAFCKGHREDDA 275
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ +M++ G P+ YN I C + RL +A ++MV++ +SP+ TY++F
Sbjct: 276 IGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFING 335
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + + M G +PN L+ + + AL++ +DM+ KG
Sbjct: 336 LIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPN 395
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + L C ++ +AE EMI +G +Q SF +
Sbjct: 396 SVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMV 437
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 101/249 (40%), Gaps = 35/249 (14%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDE--------------------- 39
M G+ P+ V+ N LI +CK Q+ +A ++E+M
Sbjct: 387 MLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFR 446
Query: 40 --------------DISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNA 85
++ P+ T+++ GL G+ +A ++ + G P+ NA
Sbjct: 447 FVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNA 506
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
I C A +++ L+ +M+E+GL + TYN ++ + L M+ G
Sbjct: 507 LIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKG 566
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
P+ + L+ +K++ A +LW++ + G+ + V+ D C K+ E E
Sbjct: 567 IQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGE 626
Query: 206 KSFLEMIEK 214
E++ K
Sbjct: 627 NLLNELVSK 635
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 99/218 (45%), Gaps = 3/218 (1%)
Query: 1 MREM---GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGL 57
+REM ++P+ L+ CK + +A ++ ++ + P++++ ++I GL
Sbjct: 454 IREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCK 513
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
G + +L++M E G D YN I C ++++ L +EMV+KG+ P+ T
Sbjct: 514 AGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYT 573
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
+NL ++ + + L+ G +PN + ++ + KVE L N++V
Sbjct: 574 FNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELV 633
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
K +V + L C G + A + +M +G
Sbjct: 634 SKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRG 671
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 87/198 (43%)
Query: 29 AYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIR 88
A + + + + P + + T ++ L + K+ +V + G PD ++ I
Sbjct: 205 AADVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMIN 264
Query: 89 NYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLP 148
+C R DA GL +M + G++PN TYN S L ++ +M+ P
Sbjct: 265 AFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSP 324
Query: 149 NTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSF 208
+ + + + EK++ A + +M E GF +V + L D C MG + EA K
Sbjct: 325 SLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIR 384
Query: 209 LEMIEKGHKPSQVSFRRI 226
+M+ KG P+ V+ +
Sbjct: 385 DDMLSKGISPNSVTLNSL 402
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+ PD V+YN + CK+ +VE+A+K+ ++M + D I+YT++I G Q
Sbjct: 772 MTEKGILPDAVTYNAFTNGLCKEGKVEEAFKVCDEMSSGAVCLDEITYTTLIDG---CHQ 828
Query: 61 PDKARD 66
P A +
Sbjct: 829 PSTATN 834
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + P+ +Y +ID +CK + ++A K++ +M ++ I PD ++Y + GL G+
Sbjct: 737 MSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGK 796
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAI 87
++A V EM D Y I
Sbjct: 797 VEEAFKVCDEMSSGAVCLDEITYTTLI 823
>gi|225424178|ref|XP_002280443.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial [Vitis vinifera]
Length = 531
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 129/247 (52%), Gaps = 1/247 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G +PD V+Y LI+ +CK R+ + A ++ KM P Y ++I GLG +
Sbjct: 275 MKDEGFEPDAVTYGILINAHCKARRYDAAVELFHKMEANKCMPTPHIYCTLINGLGSERR 334
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + K G P+A YNA + +YC + R+ DA ++DEM + G+ P TY++
Sbjct: 335 LTEALQFFERSKASGFTPEAPTYNAVVGSYCQSMRMDDAYRIVDEMRKCGVGPQTRTYDI 394
Query: 121 FFRVFYWSNDLRSSWNLYCRMMG-TGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ + ++ ++ M GC P+ + +V++ +E+V++AL++W++M K
Sbjct: 395 ILHHLIKARRTKEAYRVFQGMSSEPGCEPSVSTYEIVVRMFCNEERVDMALRVWDEMKAK 454
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
G + + L + LC KL EA K F EM++ G +P F +K + KQ+ +
Sbjct: 455 GVLPGMHMFSTLINSLCYENKLDEACKYFHEMLDMGIRPPAAMFSNLKQTLLDEGKQDMV 514
Query: 240 QNLSNKM 246
L+ K+
Sbjct: 515 LILAQKL 521
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/204 (19%), Positives = 85/204 (41%)
Query: 20 YCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPD 79
Y + R+V++A + EKM + P + + ++ L ++A++V +MK+ PD
Sbjct: 189 YARARKVKEAVETFEKMEKFGLQPVLSDFNRLLDALCKSRHVERAQEVFDKMKDRKFRPD 248
Query: 80 AAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYC 139
+Y + + + L + EM ++G P+A TY + + ++ L+
Sbjct: 249 IKSYTILLEGWGQEQNLLRLDEVYREMKDEGFEPDAVTYGILINAHCKARRYDAAVELFH 308
Query: 140 RMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMG 199
+M C+P L+ + ++ ALQ + GF + + C
Sbjct: 309 KMEANKCMPTPHIYCTLINGLGSERRLTEALQFFERSKASGFTPEAPTYNAVVGSYCQSM 368
Query: 200 KLVEAEKSFLEMIEKGHKPSQVSF 223
++ +A + EM + G P ++
Sbjct: 369 RMDDAYRIVDEMRKCGVGPQTRTY 392
>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Vitis vinifera]
gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 122/263 (46%), Gaps = 39/263 (14%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV P++V++N LID CK ++E+A +++ M SPD +Y ++I G L G+
Sbjct: 299 MVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGR 358
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D ARD+ M+ G DA +YN I YC + R+ +A L EM+ K + P TYN
Sbjct: 359 IDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNT 418
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMF---LVKLCK---------------- 161
+ +R +WNL+ M P +SC + L LCK
Sbjct: 419 LLTGLFREGKVRDAWNLFGEMKVHDLTP--ESCTYNILLDGLCKNNHLSEAMELFHYLEN 476
Query: 162 ------------------RQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVE 203
+ K+EIA +L+N + +G ++ V+ LC G+L
Sbjct: 477 HDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLEN 536
Query: 204 AEKSFLEMIEKGHKPSQVSFRRI 226
A+ FL M EKG P+ V+F +
Sbjct: 537 AKDLFLGMEEKGCAPNLVTFNTL 559
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 118/232 (50%), Gaps = 6/232 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDED------ISPDVISYTSIIGG 54
M MG +P++V+Y L++ C A K+ E+M + + I P+++ Y +II
Sbjct: 188 MVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDS 247
Query: 55 LGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPN 114
L G DK +++ EMK G PD AY++ I C R A GL +EMV++G+ PN
Sbjct: 248 LCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPN 307
Query: 115 ATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWN 174
T+N+ + + + +L M+ G P+T + L+ + +++ A L+
Sbjct: 308 VVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFV 367
Query: 175 DMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
M KG + + +VL + C G++VEA+K + EM+ K P+ +++ +
Sbjct: 368 SMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTL 419
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 111/219 (50%), Gaps = 2/219 (0%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+KP++V Y +ID CKD ++K ++ +M+ ISPDV++Y+SII G+ G+ + A+
Sbjct: 234 IKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAK 293
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+ EM + G +P+ +N I C A ++ +A+ L+ M+++G SP+ TYN F
Sbjct: 294 GLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGF 353
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + +L+ M G + S L+ CK VE A +L+ +M+ K
Sbjct: 354 CLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVE-AKKLYREMMCKEIMPT 412
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + L L GK+ +A F EM P ++
Sbjct: 413 VITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTY 451
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 104/232 (44%), Gaps = 6/232 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G+ PD ++ N LI+ YC +V+ ++ +M SP+ +++TS++ GL L +
Sbjct: 118 MSLIGLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSR 177
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKG------LSPN 114
+A +L++M G P+ Y + C+ A L +EM+ + PN
Sbjct: 178 ISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPN 237
Query: 115 ATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWN 174
Y + L+ M G G P+ + ++ + E A L+N
Sbjct: 238 LVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFN 297
Query: 175 DMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+MV++G ++ +VL D LC GK+ EA MI++G P ++ +
Sbjct: 298 EMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTL 349
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 69/114 (60%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
+P I +NCLID CK R++E A ++ ++ E + P+VI+YT +I GL GQ + A+D
Sbjct: 480 QPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKD 539
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ M+E GC P+ +N +R +C ++ L+ EM EK SP+A+T ++
Sbjct: 540 LFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISI 593
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 108/237 (45%), Gaps = 3/237 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G++ D VSYN LI+ YCK ++ +A K+ +M ++I P VI+Y +++ GL G+
Sbjct: 369 MESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGK 428
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A ++ EMK + P++ YN + C L +A L + P+ +N
Sbjct: 429 VRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNC 488
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + L+ R+ G PN + ++ + ++E A L+ M EKG
Sbjct: 489 LIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKG 548
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQE 237
++ + L C ++ + + EM EK P + I +++L +K E
Sbjct: 549 CAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDAST---ISIVVDLLSKDE 602
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 105/248 (42%), Gaps = 8/248 (3%)
Query: 8 PDIVSYNCLIDVYCKDRQVEK--AYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
PD + CK +++ A+ + + D +P + S+ +++G + + +
Sbjct: 53 PDRGQLENFLKSNCKSGHIKRSEAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVI 112
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+ K M G PD N I YC ++ ++ EM+ +G SPN T+ +
Sbjct: 113 SLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGL 172
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV--EKGFGS 183
+ + + L +M+ G PN + L+ +A++L +M+ GFG
Sbjct: 173 CLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGV 232
Query: 184 YILVSDV----LFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
I + V + D LC G + + ++ FLEM +G P V++ I M + E
Sbjct: 233 TIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGA 292
Query: 240 QNLSNKMA 247
+ L N+M
Sbjct: 293 KGLFNEMV 300
>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580 [Vitis vinifera]
gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 115/223 (51%), Gaps = 1/223 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PD+ ++N LID YCK +++ A +IV++M + +SPDVI+Y SI+ GL G+ +
Sbjct: 455 GHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDV 514
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
K M E GC P+ YN ++C A+++ +A L++EM KGL+P+ + +
Sbjct: 515 MGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKG 574
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCM-FLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
F + DL ++ L+ R+ +T + ++ + + +A +L+N M E GF
Sbjct: 575 FCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSP 634
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
V+ D C G + L IEKG PS +F R+
Sbjct: 635 DSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRV 677
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 111/222 (50%), Gaps = 1/222 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV P++ + N I +C+ + +A ++++ + ++PDVI+Y ++I GL + +A
Sbjct: 246 GVSPNLFTVNIFIQGFCQRAMLNEAIRLLDGV-GRGLTPDVITYNTLICGLCKNFKVVEA 304
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
L++M G PD YN+ I YC +++A ++ + KG P+ +TY
Sbjct: 305 EHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLING 364
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
D+ + N++ M G PN C LVK +Q + AL+L N+M E G
Sbjct: 365 LCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPD 424
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
I +++ + LC +G + +A+ ++ I KGH P +F +
Sbjct: 425 IWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTL 466
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 107/221 (48%), Gaps = 3/221 (1%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
+P + SYN ++++ + R ++A+K+ +MRD+ I PDV ++T + +P AR
Sbjct: 108 EPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPDVYTFTIRMKSFCRTSRPHAARR 167
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
+L M GC A AY I + +A L +EM+ G+ P+ +N
Sbjct: 168 LLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEMLGLGICPDIMAFNKLIHTLC 227
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSC-MFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
++ S L +++ G PN + +F+ C+R E A++L D V +G +
Sbjct: 228 RKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNE-AIRLL-DGVGRGLTPDV 285
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + L LC K+VEAE +M+ +G++P ++ I
Sbjct: 286 ITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSI 326
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 121/262 (46%), Gaps = 9/262 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G +PD +YN +ID YCK ++ A +I+ + PD +Y S+I GL G
Sbjct: 311 MVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGD 370
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A +V E E G P+ N ++ + A LM+EM E G SP+ TYNL
Sbjct: 371 IDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNL 430
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + NL + G LP+ + L+ ++ K++ A+++ + M G
Sbjct: 431 VINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHG 490
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQV-------SFRRIKALMELA 233
++ + + + LC GK + +F M+EKG P+ + SF + + + E
Sbjct: 491 VSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEAL 550
Query: 234 NKQEALQN--LSNKMALFGPSM 253
N E +QN L+ + FG M
Sbjct: 551 NLIEEMQNKGLTPDVVNFGTLM 572
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 98/212 (46%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E G+KP++V N L+ + + +A K++ +M + SPD+ +Y +I GL +G
Sbjct: 383 EKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVS 442
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
A +++ + G PD +N I YC +L +A ++D M G+SP+ TYN
Sbjct: 443 DADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSIL 502
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
+ + MM GC+PN + L + + KVE AL L +M KG
Sbjct: 503 NGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLT 562
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEK 214
++ L CD G L A + F + E+
Sbjct: 563 PDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQ 594
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 109/227 (48%), Gaps = 9/227 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G+ PD+ ++ + +C+ + A +++ M + ++Y ++IGG
Sbjct: 137 MRDKGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENH 196
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++ +EM G PD A+N I C ++++ L+++++++G+SPN T N+
Sbjct: 197 RVEAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNI 256
Query: 121 FFRVFYWSNDLRSSWNLYCRMM---GTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDM 176
F + F R+ N R++ G G P+ + L+ LCK + VE A M
Sbjct: 257 FIQGFCQ----RAMLNEAIRLLDGVGRGLTPDVITYNTLICGLCKNFKVVE-AEHYLRKM 311
Query: 177 VEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
V +G+ + + D C +G + A++ + KG P + ++
Sbjct: 312 VNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTY 358
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 93/207 (44%), Gaps = 1/207 (0%)
Query: 20 YCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPD 79
Y + ++++A + E+M + P V SY +I+ L D+A V M++ G PD
Sbjct: 86 YGRKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPD 145
Query: 80 AAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYC 139
+ ++++C R A L++ M +G +A Y FY N + L+
Sbjct: 146 VYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFE 205
Query: 140 RMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMG 199
M+G G P+ + L+ R+ V+ + +L N ++++G + ++ C
Sbjct: 206 EMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRA 265
Query: 200 KLVEAEKSFLEMIEKGHKPSQVSFRRI 226
L EA + L+ + +G P +++ +
Sbjct: 266 MLNEAIR-LLDGVGRGLTPDVITYNTL 291
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 105/249 (42%), Gaps = 47/249 (18%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G P+I++YN L + +CK R+VE+A ++E+M+++ ++PDV+++ +++ G G
Sbjct: 521 MMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGD 580
Query: 61 PDKARDVLK------------------------------------EMKEYGCYPDAAAYN 84
D A + K +M E G PD+ Y
Sbjct: 581 LDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYR 640
Query: 85 AAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGT 144
I +C + + +EKGL P+ TT+ + + + M+
Sbjct: 641 VMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVGIIHLMVHK 700
Query: 145 GCLPNTQSCMFLVKLCKRQEKVEIALQ--LWNDMVEKGFGSYI---LVSDVLFDLLCDMG 199
G +P + +F +K E+A + ++++KG +Y ++ D + D
Sbjct: 701 GIVPEVVNTIF------EADKKEVAAPKIVVENLMKKGHITYFAYEILHDGIRDKKLSRK 754
Query: 200 KLVEAEKSF 208
KL ++K F
Sbjct: 755 KLPTSQKVF 763
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 115/259 (44%), Gaps = 10/259 (3%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMR---DEDISPDVISYTSIIGGLGLV 58
+E G K +++Y +I+ + E +++ + R D + V Y + G
Sbjct: 32 KEDGFKHTLLTYKGMIEKLGFHGEFEAMEEVLAETRMNIDNGLLEGV--YIGAMRNYGRK 89
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRD-ASGLMDEMVEKGLSPNATT 117
G+ +A DV + M + C P +YN AI N + R D A + M +KG+ P+ T
Sbjct: 90 GKIQEAVDVFERMDFFNCEPSVQSYN-AIMNILVEYRYFDQAHKVYMRMRDKGIVPDVYT 148
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDM 176
+ + + F ++ ++ L M GC + + C + + +VE A +L+ +M
Sbjct: 149 FTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVE-AHELFEEM 207
Query: 177 VEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANK 235
+ G I+ + L LC G + E+E+ +++++G P+ + I+ + A
Sbjct: 208 LGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAML 267
Query: 236 QEALQNLSNKMALFGPSMI 254
EA++ L P +I
Sbjct: 268 NEAIRLLDGVGRGLTPDVI 286
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 99/230 (43%), Gaps = 8/230 (3%)
Query: 28 KAYKIVEKMRDED-ISPDVISYTSIIGGLGLVGQPDKARDVLKEMK---EYGCYPDAAAY 83
KA +I ++ ED +++Y +I LG G+ + +VL E + + G Y
Sbjct: 22 KALEIFNSVKKEDGFKHTLLTYKGMIEKLGFHGEFEAMEEVLAETRMNIDNGLL--EGVY 79
Query: 84 NAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMG 143
A+RNY ++++A + + M P+ +YN + + +Y RM
Sbjct: 80 IGAMRNYGRKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRD 139
Query: 144 TGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVE 203
G +P+ + +K R + A +L N+M +G S + + + VE
Sbjct: 140 KGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVE 199
Query: 204 AEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLSNKMALFGPS 252
A + F EM+ G P ++F + I L + QE+ + L NK+ G S
Sbjct: 200 AHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQES-ERLLNKVLKRGVS 248
>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
gi|194702156|gb|ACF85162.1| unknown [Zea mays]
gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
Length = 567
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 125/243 (51%), Gaps = 1/243 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD+V+Y L++ CK ++A K++++M D+ +PD+++Y ++ G+ G+
Sbjct: 192 MFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGR 251
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A + LK + YGC P+ +YN ++ A+R DA LM+EM KG PN T+N+
Sbjct: 252 VEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNM 311
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + +M GC PN+ S L+ +Q+K+ A++ MV +G
Sbjct: 312 LISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRG 371
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
I+ + L LC G++ A + ++ +KG P +S+ I L + +EAL
Sbjct: 372 CYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEAL 431
Query: 240 QNL 242
+ L
Sbjct: 432 ELL 434
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 113/228 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G PDIV+YN +++ C++ +VE A + ++ + P+ +SY ++ GL +
Sbjct: 227 MHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAER 286
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A +++EM GC P+ +N I C + A ++++M + G +PN+ +YN
Sbjct: 287 WEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNP 346
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + + M+ GC P+ S L+ R +V++A++L + + +KG
Sbjct: 347 LLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKG 406
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKA 228
++ + + D L GK EA + EM KG +P +++ I +
Sbjct: 407 CSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIAS 454
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 107/216 (49%), Gaps = 2/216 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G P+ +SYN L+ +CK +++ KA + VE M PD++SY +++ L G+
Sbjct: 332 MPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGE 391
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A ++L ++K+ GC P +YN I A + ++A L+DEM KGL P+ TY+
Sbjct: 392 VDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYST 451
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQ-SCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ + + +C++ G P L+ LCKR+E A+ L+ M+
Sbjct: 452 IASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRE-THNAIDLFAYMISS 510
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
G +L + L G + EA + F ++ +G
Sbjct: 511 GCMPNESTYTILVEGLAYEGLVKEARELFAQLCSRG 546
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 3/216 (1%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD++ YN ++ YC Q++ A ++V M + PD +Y ++I GL G+ A V
Sbjct: 132 PDVMVYNAMVAGYCGAGQLDAARRLVADM---PVEPDAYTYNTLIRGLCGRGRTSNALAV 188
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L++M GC PD Y + C + A L+DEM +KG +P+ TYN+
Sbjct: 189 LEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQ 248
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ + + GC PNT S ++K E+ E A +L +M KG ++
Sbjct: 249 EGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVT 308
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++L LC G + A + +M + G P+ +S+
Sbjct: 309 FNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSY 344
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 122/246 (49%), Gaps = 6/246 (2%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G +P+ VSYN ++ + E A K++E+M + P+V+++ +I L G + A
Sbjct: 266 GCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPA 325
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+VL++M +YGC P++ +YN + +C K++ A ++ MV +G P+ +YN
Sbjct: 326 MEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTA 385
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ ++ + L ++ GC P S ++ + K + AL+L ++M KG
Sbjct: 386 LCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPD 445
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSN 244
I+ + LC ++ EA ++F ++ + G +P+ + I L+ L ++E N
Sbjct: 446 IITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAI--LLGLCKRRET----HN 499
Query: 245 KMALFG 250
+ LF
Sbjct: 500 AIDLFA 505
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 100/223 (44%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P++V++N LI C+ VE A +++E+M +P+ +SY ++ +
Sbjct: 297 MAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKK 356
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA + ++ M GCYPD +YN + C + A L+ ++ +KG SP +YN
Sbjct: 357 IHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNT 416
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + L M G P+ + + R++++E A++ + + + G
Sbjct: 417 VIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMG 476
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + + LC + A F MI G P++ ++
Sbjct: 477 IRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTY 519
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 55/111 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G++PDI++Y+ + C++ ++E+A + K++D I P Y +I+ GL +
Sbjct: 437 MTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRE 496
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGL 111
A D+ M GC P+ + Y + +++A L ++ +G+
Sbjct: 497 THNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEARELFAQLCSRGV 547
>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
Length = 851
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 112/226 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P++V+YN LID YCK ++++A+ +++ M + + P++ISY II GL G
Sbjct: 36 MERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGS 95
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++L+EM G PD YN + YC A + EMV G+SP+ TY
Sbjct: 96 MKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTA 155
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ +L + + +M G PN ++ L+ RQ + A ++ N+M E G
Sbjct: 156 LINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESG 215
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
F ++ + C + ++ EA EM+EKG P VS+ I
Sbjct: 216 FSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTI 261
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 123/245 (50%), Gaps = 23/245 (9%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G P +V+YN I +C ++E+A +V++M ++ ++PDV+SY++II G G+
Sbjct: 211 MTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGE 270
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + +EM E G PDA Y++ I+ C +RL +A L EM++ GL P+ TY
Sbjct: 271 LDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTT 330
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ DL + +L+ M+ G LP+ + L+ +Q + A +L ++ +
Sbjct: 331 LINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYE- 389
Query: 181 FGSYILVSDVLFDLL-------------------CDMGKLVEAEKSFLEMIEKGHKPSQV 221
+ SDV +D L C G + EA++ F M+E+ HKP +
Sbjct: 390 ---ESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEA 446
Query: 222 SFRRI 226
+ I
Sbjct: 447 VYNVI 451
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 121/240 (50%), Gaps = 3/240 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV P +V+Y LI+ CK R + +A + ++MR + P+ +YT++I G G
Sbjct: 141 MVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGL 200
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A +L EM E G P YNA I +C+ +R+ +A G++ EMVEKGL+P+ +Y+
Sbjct: 201 LNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYST 260
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
F +L ++ + M+ G P+ + L++ LC+ + E A L +M++
Sbjct: 261 IISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTE-ACDLSQEMLDM 319
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEA 238
G L + C G L +A EMI KG P V++ I L + A +EA
Sbjct: 320 GLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREA 379
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 115/223 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G++P+ +Y LID + + + +AY+I+ +M + SP V++Y + I G ++ +
Sbjct: 176 MRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLER 235
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A V++EM E G PD +Y+ I +C L A + EMVEKG+SP+A TY+
Sbjct: 236 MEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSS 295
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L + +L M+ G P+ + L+ + + AL L ++M+ KG
Sbjct: 296 LIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKG 355
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
F + VL + L + EA++ ++I + PS V++
Sbjct: 356 FLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTY 398
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 106/235 (45%), Gaps = 1/235 (0%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
V P++ +YN LI +C +++K +M P+V++Y ++I +G+ D+A
Sbjct: 6 VSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAF 65
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+LK M G P+ +YN I C +++A +++EM KG +P+ TYN +
Sbjct: 66 GLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGY 125
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ + ++ M+ G P+ + L+ + + A++ ++ M +G
Sbjct: 126 CKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNE 185
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
L D G L EA + EM E G PS V++ I L +EAL
Sbjct: 186 RTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEAL 240
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 83/173 (47%), Gaps = 15/173 (8%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +MG+ PD +Y LI+ YC + + KA + ++M + PD ++Y+ +I GL +
Sbjct: 316 MLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQAR 375
Query: 61 PDKARDVLKEMKEYGCYPDAAAYN---------------AAIRNYCIAKRLRDASGLMDE 105
+A+ +L ++ P Y+ A I+ +C+ + +A + +
Sbjct: 376 TREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFES 435
Query: 106 MVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK 158
MVE+ P YN+ +L ++NLY M+ +G +P+T + + L+K
Sbjct: 436 MVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIK 488
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 68/172 (39%), Gaps = 6/172 (3%)
Query: 78 PDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNL 137
P+ YN IR +C L+ G EM G PN TYN + + ++ L
Sbjct: 8 PNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGL 67
Query: 138 YCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCD 197
M G PN S ++ R+ ++ A ++ +M KGF + + L + C
Sbjct: 68 LKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCK 127
Query: 198 MGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALF 249
G +A EM+ G PS V++ L N +NL+ M F
Sbjct: 128 EGNFHQALVIHAEMVRNGVSPSVVTY------TALINSMCKARNLNRAMEFF 173
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 57/121 (47%)
Query: 106 MVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEK 165
M+ +SPN TYN+ R F +L+ + M GCLPN + L+ + +
Sbjct: 1 MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60
Query: 166 VEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR 225
++ A L M KG ++ +V+ + LC G + EA + EM KG P +V++
Sbjct: 61 IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 120
Query: 226 I 226
+
Sbjct: 121 L 121
>gi|297841875|ref|XP_002888819.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297334660|gb|EFH65078.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 512
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 131/246 (53%), Gaps = 3/246 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G +PD+V+Y +I+ YCK ++ ++A + +M + P + S+I GLG +
Sbjct: 260 MKDEGFEPDVVAYGIIINAYCKAKKYDEAVRFFNEMEQRNCKPSPHIFCSLINGLGSEKK 319
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A + + K G +A YNA + YC ++R+ DA +DEM KG+ PNA TY++
Sbjct: 320 LNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAFKTVDEMRSKGIGPNARTYDI 379
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ +Y +M C P + +V++ +E++++A+++W++M KG
Sbjct: 380 ILHHLIRMQRTKEAYEVYQKM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKG 436
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ + L LC KL EA + F EM++ G +P F R+K + +++ +
Sbjct: 437 VLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHLFSRLKQTLLDEGRKDKVA 496
Query: 241 NLSNKM 246
+L+ KM
Sbjct: 497 DLAVKM 502
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/241 (20%), Positives = 94/241 (39%), Gaps = 36/241 (14%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G K + +N ++D+ K R V A K+ +KM+ + PD+ SYT ++ G G
Sbjct: 190 MEDYGFKMESSDFNRMLDILSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWG---- 245
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ ++L+ + YG EM ++G P+ Y +
Sbjct: 246 --QELNLLRVNEVYG-----------------------------EMKDEGFEPDVVAYGI 274
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + + M C P+ L+ ++K+ AL+ + G
Sbjct: 275 IINAYCKAKKYDEAVRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSG 334
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI-KALMELANKQEAL 239
F + L C ++ +A K+ EM KG P+ ++ I L+ + +EA
Sbjct: 335 FPLEAPTYNALVGAYCWSQRMEDAFKTVDEMRSKGIGPNARTYDIILHHLIRMQRTKEAY 394
Query: 240 Q 240
+
Sbjct: 395 E 395
>gi|115461911|ref|NP_001054555.1| Os05g0132000 [Oryza sativa Japonica Group]
gi|52353663|gb|AAU44229.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113578106|dbj|BAF16469.1| Os05g0132000 [Oryza sativa Japonica Group]
gi|125550727|gb|EAY96436.1| hypothetical protein OsI_18334 [Oryza sativa Indica Group]
Length = 637
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 118/223 (52%), Gaps = 5/223 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ GV P++ +YN LI C++ +V+ A K++++M + PD +S+ +I+ G+ +G+
Sbjct: 148 MRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGR 207
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++AR L E P A+YNA + C R+ + +++EMV++GL PN TY
Sbjct: 208 VEEARGFLAET-----VPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTT 262
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + +LR + + RM+ GC PN + LVK KV AL +W+ MV++G
Sbjct: 263 IVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEG 322
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + +VL LC +G L A F M P+ ++
Sbjct: 323 WAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTY 365
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 111/240 (46%), Gaps = 1/240 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G++P++V+Y ++D +CK R++ A I+ +M +P+V+++T+++ G G+
Sbjct: 248 MVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGK 307
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A + M + G P +YN IR C L+ A + M L PNATTY+
Sbjct: 308 VHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYST 367
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + DL + ++ M +GC PN ++ + ++ + A L + M+
Sbjct: 368 LVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDN 427
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
+ + L LCD G++ A F M G P+ ++ + L N ++A
Sbjct: 428 CPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAF 487
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 106/223 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G KP++V Y +IDV CK ++A +++KM ++ P+ +++ ++IG L G+
Sbjct: 388 MKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGR 447
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A +V M+ GC+P+ YN + +DA ++ EM+ G + TYN
Sbjct: 448 VGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNT 507
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + L RMM G P+ + ++ ++ KV IA L M
Sbjct: 508 VINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVN 567
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ +L LC+ GKL A L+M+ +G P++ ++
Sbjct: 568 CPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATW 610
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 102/219 (46%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P SYN ++ C + ++ + + +V +M + P+V++YT+I+ + A +
Sbjct: 220 PVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAI 279
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L M GC P+ + A ++ + ++ DA + MV++G +P+ +YN+ R
Sbjct: 280 LARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCC 339
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
DL+ + + + M LPN + LV ++ A+ +WN+M G ++V
Sbjct: 340 IGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVV 399
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ D+LC +AE +M+ P+ V+F +
Sbjct: 400 YTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTL 438
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 94/226 (41%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G P +SYN LI C ++ A M+ + P+ +Y++++ G G
Sbjct: 318 MVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGD 377
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A + EMK GC P+ Y I C A L+D+M+ PN T+N
Sbjct: 378 LDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNT 437
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + N++ M GC PN ++ L+ R+ + A + +M+ G
Sbjct: 438 LIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNG 497
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
F ++ + + + LC M A M+ +G +P +F I
Sbjct: 498 FELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAI 543
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 60/126 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G + +V+YN +I+ C+ + A ++ +M + I PD ++ +II G+
Sbjct: 493 MLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGK 552
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +L +M C + AY I C +L +A + +M+ +G+ PN T+N+
Sbjct: 553 VSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNV 612
Query: 121 FFRVFY 126
R +
Sbjct: 613 LVRAIF 618
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 67/158 (42%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G P+ +YN L+ ++ + A+ +V +M + +++Y ++I L +
Sbjct: 458 MRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCM 517
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +L M G PDA +NA I YC ++ A+ L+ +M N Y +
Sbjct: 518 RKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTI 577
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK 158
L ++ +M+ G PN + LV+
Sbjct: 578 LISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLVR 615
>gi|242086791|ref|XP_002439228.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
gi|241944513|gb|EES17658.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
Length = 653
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 117/223 (52%), Gaps = 5/223 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ GV+P++ +YN L+ C++ +V A K++++M + PD ++Y +I+ L +G+
Sbjct: 160 MRKDGVQPNVFTYNLLVRALCQNHRVGAARKMLDEMATKGCPPDDVTYGTIVSALCTLGR 219
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A +VL P AA+YNA I C R+++ ++ +MV +GL PN TY
Sbjct: 220 VDEATEVLSAAP-----PVAASYNAVILALCREFRMQEVFAVVGDMVGRGLQPNVITYTT 274
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + +LR + + RM+ TGC PN + LV +V AL +W MV +G
Sbjct: 275 IVNAFCKAGELRMACAILARMVITGCTPNVATFTALVGGLFNDGRVHDALDMWKCMVAEG 334
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + +VL LC +G L A +M + G P+ ++
Sbjct: 335 WAPSTVSYNVLIRGLCSVGDLKGASSVLNDMEQHGCFPNARTY 377
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 116/237 (48%), Gaps = 1/237 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G++P++++Y +++ +CK ++ A I+ +M +P+V ++T+++GGL G+ A
Sbjct: 264 GLQPNVITYTTIVNAFCKAGELRMACAILARMVITGCTPNVATFTALVGGLFNDGRVHDA 323
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
D+ K M G P +YN IR C L+ AS ++++M + G PNA TY+
Sbjct: 324 LDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDLKGASSVLNDMEQHGCFPNARTYSTLIDG 383
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
F + DL + +++ M +GC PN +V + ++ A L + M+ +
Sbjct: 384 FSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKMLVENCPPN 443
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQ 240
+ + L LC+ ++ A F EM G P+ ++ + L N +ALQ
Sbjct: 444 TVTFNTLIRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYNELLHGLFREGNCGDALQ 500
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 104/219 (47%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P SYN +I C++ ++++ + +V M + P+VI+YT+I+ G+ A +
Sbjct: 232 PVAASYNAVILALCREFRMQEVFAVVGDMVGRGLQPNVITYTTIVNAFCKAGELRMACAI 291
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L M GC P+ A + A + R+ DA + MV +G +P+ +YN+ R
Sbjct: 292 LARMVITGCTPNVATFTALVGGLFNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCS 351
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
DL+ + ++ M GC PN ++ L+ + ++ A+ +WNDM G ++V
Sbjct: 352 VGDLKGASSVLNDMEQHGCFPNARTYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVV 411
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + C +AE +M+ + P+ V+F +
Sbjct: 412 YTNMVGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTL 450
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 92/222 (41%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G P VSYN LI C ++ A ++ M P+ +Y+++I G G D A
Sbjct: 334 GWAPSTVSYNVLIRGLCSVGDLKGASSVLNDMEQHGCFPNARTYSTLIDGFSKAGDLDGA 393
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ +M GC P+ Y + +C A L+D+M+ + PN T+N R
Sbjct: 394 ISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTLIRS 453
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + ++ M GC PN ++ L+ R+ ALQ+ +M G
Sbjct: 454 LCNCRRVGRALGVFHEMRRHGCPPNGRTYNELLHGLFREGNCGDALQMVIEMQNHGIELS 513
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ + + LC M EA MI +G +P +F I
Sbjct: 514 LVTYNTVVSGLCQMRMGREAMFFVGRMIVRGIQPDAFTFTAI 555
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 102/223 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G KP++V Y ++ V+CK +A +++KM E+ P+ +++ ++I L +
Sbjct: 400 MTRSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTLIRSLCNCRR 459
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A V EM+ +GC P+ YN + DA ++ EM G+ + TYN
Sbjct: 460 VGRALGVFHEMRRHGCPPNGRTYNELLHGLFREGNCGDALQMVIEMQNHGIELSLVTYNT 519
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
R + RM+ G P+ + ++ ++ +V +A + M
Sbjct: 520 VVSGLCQMRMGREAMFFVGRMIVRGIQPDAFTFTAIIHAYCKEGEVRMAAWILGAMNVVN 579
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G ILV +L LC+ KL +A L+M+ +G P+ V++
Sbjct: 580 CGRNILVYTILMAELCNQDKLEDAMVYLLKMLYEGIYPNTVTW 622
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 59/126 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G++ +V+YN ++ C+ R +A V +M I PD ++T+II G+
Sbjct: 505 MQNHGIELSLVTYNTVVSGLCQMRMGREAMFFVGRMIVRGIQPDAFTFTAIIHAYCKEGE 564
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +L M C + Y + C +L DA + +M+ +G+ PN T+N+
Sbjct: 565 VRMAAWILGAMNVVNCGRNILVYTILMAELCNQDKLEDAMVYLLKMLYEGIYPNTVTWNV 624
Query: 121 FFRVFY 126
R +
Sbjct: 625 LVRGVF 630
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 68/158 (43%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G P+ +YN L+ ++ A ++V +M++ I +++Y +++ GL +
Sbjct: 470 MRRHGCPPNGRTYNELLHGLFREGNCGDALQMVIEMQNHGIELSLVTYNTVVSGLCQMRM 529
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + M G PDA + A I YC +R A+ ++ M N Y +
Sbjct: 530 GREAMFFVGRMIVRGIQPDAFTFTAIIHAYCKEGEVRMAAWILGAMNVVNCGRNILVYTI 589
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK 158
+ L + +M+ G PNT + LV+
Sbjct: 590 LMAELCNQDKLEDAMVYLLKMLYEGIYPNTVTWNVLVR 627
>gi|242038757|ref|XP_002466773.1| hypothetical protein SORBIDRAFT_01g013990 [Sorghum bicolor]
gi|241920627|gb|EER93771.1| hypothetical protein SORBIDRAFT_01g013990 [Sorghum bicolor]
Length = 487
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 128/249 (51%), Gaps = 1/249 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G +PDIV+Y ++D CK +VE+A +V+ M P Y+ ++ G+ +
Sbjct: 233 MLAAGCQPDIVTYGIMVDALCKTGRVEEAVCVVQDMSSRGCQPTTFIYSVLVHTYGVDMR 292
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A +M++ G PD YNA + +C K+ +A +MD+M G+SPN+ T+N+
Sbjct: 293 IEDAVATFLDMEKDGIVPDVVVYNALVTAFCKVKKFDNAFRVMDDMEGHGISPNSRTWNI 352
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++ ++ R M C P++ + ++K+ +K+E+AL++W M K
Sbjct: 353 ILNTLISLGKDDEAYRVF-RNMIKRCKPDSDTYTMMIKMFCENDKIEMALKVWKYMRLKQ 411
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
F + VL + LCD G++ +A +MIEKG +P +F +++ L+ +++ L
Sbjct: 412 FLPSMHTFSVLINGLCDKGEVSQACVLLEDMIEKGIRPPGSTFGKLRQLLLKEGRKDVLD 471
Query: 241 NLSNKMALF 249
L KM +
Sbjct: 472 FLVEKMKML 480
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 103/219 (47%), Gaps = 2/219 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G + SY+ ++ K RQ + + +V MR E ++ +V +++ I+ + D+A
Sbjct: 99 GCAHTVRSYHTVVASLAKIRQYQLMWDVVAVMRKEGVA-NVETFSIIMRKYARAQKFDEA 157
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
M+ YG + AA+N+ + C +K +R A + D+M + SP+A TY++
Sbjct: 158 VYTFNIMERYGVAHNLAAFNSLLGALCKSKNVRKAQEIFDKMNNR-FSPDAKTYSILLEG 216
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + +L +Y M+ GC P+ + +V + +VE A+ + DM +G
Sbjct: 217 WGRAPNLPKMREVYSDMLAAGCQPDIVTYGIMVDALCKTGRVEEAVCVVQDMSSRGCQPT 276
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ VL ++ +A +FL+M + G P V +
Sbjct: 277 TFIYSVLVHTYGVDMRIEDAVATFLDMEKDGIVPDVVVY 315
>gi|41152692|dbj|BAD08216.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 401
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 122/242 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + + P++V+YN +I CK + V+KA +++ M + PD ++Y SI+ G GQ
Sbjct: 107 MLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQ 166
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
P +A LK+M+ G PD YN+ + C R +A + D M ++GL P+ TTY
Sbjct: 167 PKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGT 226
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + L L M+ G PN LV +QEKVE A+ +++ M ++G
Sbjct: 227 LLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQG 286
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ + D+LC G++ +A F +MI++G +P + + + + + +K E +
Sbjct: 287 LNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAE 346
Query: 241 NL 242
L
Sbjct: 347 EL 348
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 114/226 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV PD ++YN ++ +C Q ++A ++KMR + + PDV++Y S++ L G+
Sbjct: 142 MVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGR 201
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR + M + G PD Y ++ Y L + GL+D MV G+ PN +++
Sbjct: 202 CTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSI 261
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + ++ +M G PN + ++ + + +VE A+ + M+++G
Sbjct: 262 LVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEG 321
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+V + L LC K +AE+ FLEM+++G S + F I
Sbjct: 322 LRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSI 367
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 98/219 (44%), Gaps = 11/219 (5%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDE--DISPDVISYTSIIGGLGLVGQPDKAR 65
PD+ SYN L++ C + + ++A +++ M D+ D PDV+SY+++I G G DK
Sbjct: 49 PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDK-- 106
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
M + P+ YN+ I C A+ + A ++ MV+ G+ P+ TYN F
Sbjct: 107 -----MLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGF 161
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSY 184
S + + +M G P+ + L+ LCK E A ++++ M ++G
Sbjct: 162 CSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTE-ARKIFDSMTKRGLKPD 220
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I L G LVE M+ G P+ F
Sbjct: 221 ITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVF 259
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 65/117 (55%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G+ P+ V+Y +IDV CK +VE A E+M DE + PD I Y S+I L + +
Sbjct: 282 MRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDK 341
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
+KA ++ EM + G +N+ I ++C R+ ++ L D MV G+ P+ T
Sbjct: 342 WEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIIT 398
>gi|308082018|ref|NP_001183846.1| uncharacterized protein LOC100502439 [Zea mays]
gi|238014984|gb|ACR38527.1| unknown [Zea mays]
gi|414872746|tpg|DAA51303.1| TPA: hypothetical protein ZEAMMB73_971718 [Zea mays]
Length = 623
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 115/223 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P + +Y CLI+ YC ++ + I+++M + +P++I+YT ++ LG G+
Sbjct: 327 MERHGFSPSVTTYTCLIEAYCMEKDFQTVDGILDEMHTKGCTPNIITYTIVMHALGKAGR 386
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A D ++K+ GC DA+ YN I C A RL+DA+ +++EM G+SPN TT+N
Sbjct: 387 TQEALDTFDKVKQDGCALDASFYNCLIYILCRAGRLQDANFVVEEMHRTGISPNLTTFNT 446
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ L +M C P+ ++ L+KLC R++ V+ L L M K
Sbjct: 447 LISAACDHSLAENALKLLVQMEEQSCNPDIKTYTPLLKLCCRRKWVKTLLFLICHMFRKD 506
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+L LC G+L ++ EM+ KG P Q +F
Sbjct: 507 ITPDFSTYTLLVCWLCRNGRLTQSCLFLEEMVLKGFTPQQATF 549
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 97/218 (44%), Gaps = 1/218 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV D + N L+D CK+R V++A + ++ I PD S+ +++ G
Sbjct: 258 MDRFGVAKDTKAMNVLLDTLCKERSVKRARGAFQALKGT-IPPDESSFNTLVHGWCKARM 316
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR+ +KEM+ +G P Y I YC+ K + G++DEM KG +PN TY +
Sbjct: 317 LKEARETMKEMERHGFSPSVTTYTCLIEAYCMEKDFQTVDGILDEMHTKGCTPNIITYTI 376
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + + + ++ GC + L+ + R +++ A + +M G
Sbjct: 377 VMHALGKAGRTQEALDTFDKVKQDGCALDASFYNCLIYILCRAGRLQDANFVVEEMHRTG 436
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
+ + L CD A K ++M E+ P
Sbjct: 437 ISPNLTTFNTLISAACDHSLAENALKLLVQMEEQSCNP 474
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 91/218 (41%), Gaps = 1/218 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P+I++Y ++ K + ++A +K++ + + D Y +I L G+
Sbjct: 362 MHTKGCTPNIITYTIVMHALGKAGRTQEALDTFDKVKQDGCALDASFYNCLIYILCRAGR 421
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A V++EM G P+ +N I C +A L+ +M E+ +P+ TY
Sbjct: 422 LQDANFVVEEMHRTGISPNLTTFNTLISAACDHSLAENALKLLVQMEEQSCNPDIKTYTP 481
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++ +++ L C M P+ + LV R ++ + +MV KG
Sbjct: 482 LLKLCCRRKWVKTLLFLICHMFRKDITPDFSTYTLLVCWLCRNGRLTQSCLFLEEMVLKG 541
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEK-SFLEMIEKGHK 217
F D++ + L +M L K L M +G +
Sbjct: 542 FTPQQATFDLVLEKLKNMHMLSAVRKIQLLRMHTEGTR 579
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/249 (19%), Positives = 95/249 (38%), Gaps = 34/249 (13%)
Query: 12 SYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEM 71
SY+ ++D+ K +Q + ++ +M + + + T ++ L + A D +M
Sbjct: 199 SYDMMVDILGKFKQFDLMCGLIGQMHEIGGLVSLATMTKVMRRLCGANRWSDAIDAFHKM 258
Query: 72 KEYGCY----------------------------------PDAAAYNAAIRNYCIAKRLR 97
+G PD +++N + +C A+ L+
Sbjct: 259 DRFGVAKDTKAMNVLLDTLCKERSVKRARGAFQALKGTIPPDESSFNTLVHGWCKARMLK 318
Query: 98 DASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV 157
+A M EM G SP+ TTY + D ++ + M GC PN + ++
Sbjct: 319 EARETMKEMERHGFSPSVTTYTCLIEAYCMEKDFQTVDGILDEMHTKGCTPNIITYTIVM 378
Query: 158 KLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHK 217
+ + + AL ++ + + G + L +LC G+L +A EM G
Sbjct: 379 HALGKAGRTQEALDTFDKVKQDGCALDASFYNCLIYILCRAGRLQDANFVVEEMHRTGIS 438
Query: 218 PSQVSFRRI 226
P+ +F +
Sbjct: 439 PNLTTFNTL 447
>gi|222630089|gb|EEE62221.1| hypothetical protein OsJ_17008 [Oryza sativa Japonica Group]
Length = 584
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 119/226 (52%), Gaps = 5/226 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ GV P++ +YN LI C++ +V+ A K++++M + PD +S+ +I+ G+ +G+
Sbjct: 95 MRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGR 154
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++AR L E P A+YNA + C R+ + +++EMV++GL PN TY
Sbjct: 155 VEEARGFLAET-----VPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTT 209
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + +LR + + RM+ GC PN + LVK KV AL +W+ MV++G
Sbjct: 210 IVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEG 269
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + +VL LC +G L A F M P+ ++ +
Sbjct: 270 WAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTL 315
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 111/240 (46%), Gaps = 1/240 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G++P++V+Y ++D +CK R++ A I+ +M +P+V+++T+++ G G+
Sbjct: 195 MVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGK 254
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A + M + G P +YN IR C L+ A + M L PNATTY+
Sbjct: 255 VHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYST 314
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + DL + ++ M +GC PN ++ + ++ + A L + M+
Sbjct: 315 LVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDN 374
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
+ + L LCD G++ A F M G P+ ++ + L N ++A
Sbjct: 375 CPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAF 434
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 106/223 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G KP++V Y +IDV CK ++A +++KM ++ P+ +++ ++IG L G+
Sbjct: 335 MKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGR 394
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A +V M+ GC+P+ YN + +DA ++ EM+ G + TYN
Sbjct: 395 VGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNT 454
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + L RMM G P+ + ++ ++ KV IA L M
Sbjct: 455 VINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVN 514
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ +L LC+ GKL A L+M+ +G P++ ++
Sbjct: 515 CPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATW 557
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 102/219 (46%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P SYN ++ C + ++ + + +V +M + P+V++YT+I+ + A +
Sbjct: 167 PVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAI 226
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L M GC P+ + A ++ + ++ DA + MV++G +P+ +YN+ R
Sbjct: 227 LARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCC 286
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
DL+ + + + M LPN + LV ++ A+ +WN+M G ++V
Sbjct: 287 IGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVV 346
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ D+LC +AE +M+ P+ V+F +
Sbjct: 347 YTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTL 385
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 94/226 (41%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G P +SYN LI C ++ A M+ + P+ +Y++++ G G
Sbjct: 265 MVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGD 324
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A + EMK GC P+ Y I C A L+D+M+ PN T+N
Sbjct: 325 LDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNT 384
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + N++ M GC PN ++ L+ R+ + A + +M+ G
Sbjct: 385 LIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNG 444
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
F ++ + + + LC M A M+ +G +P +F I
Sbjct: 445 FELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAI 490
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 60/126 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G + +V+YN +I+ C+ + A ++ +M + I PD ++ +II G+
Sbjct: 440 MLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGK 499
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +L +M C + AY I C +L +A + +M+ +G+ PN T+N+
Sbjct: 500 VSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNV 559
Query: 121 FFRVFY 126
R +
Sbjct: 560 LVRAIF 565
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 67/158 (42%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G P+ +YN L+ ++ + A+ +V +M + +++Y ++I L +
Sbjct: 405 MRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCM 464
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +L M G PDA +NA I YC ++ A+ L+ +M N Y +
Sbjct: 465 RKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTI 524
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK 158
L ++ +M+ G PN + LV+
Sbjct: 525 LISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLVR 562
>gi|125575277|gb|EAZ16561.1| hypothetical protein OsJ_32034 [Oryza sativa Japonica Group]
Length = 526
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 124/246 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + + P++V+YN +I CK + V+KA +++ M + PD ++Y SI+ G GQ
Sbjct: 107 MLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQ 166
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
P +A LK+M+ G PD YN+ + C R +A + D M ++GL P+ TTY
Sbjct: 167 PKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGT 226
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + L L M+ G PN LV +QEKVE A+ +++ M ++G
Sbjct: 227 LLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQG 286
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ + D+LC G++ +A F +MI++G +P + + + + + +K E +
Sbjct: 287 LNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAE 346
Query: 241 NLSNKM 246
L +M
Sbjct: 347 ELFLEM 352
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 114/226 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV PD ++YN ++ +C Q ++A ++KMR + + PDV++Y S++ L G+
Sbjct: 142 MVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGR 201
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR + M + G PD Y ++ Y L + GL+D MV G+ PN +++
Sbjct: 202 CTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSI 261
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + ++ +M G PN + ++ + + +VE A+ + M+++G
Sbjct: 262 LVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEG 321
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+V + L LC K +AE+ FLEM+++G S + F I
Sbjct: 322 LRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSI 367
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 98/219 (44%), Gaps = 11/219 (5%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDE--DISPDVISYTSIIGGLGLVGQPDKAR 65
PD+ SYN L++ C + + ++A +++ M D+ D PDV+SY+++I G G DK
Sbjct: 49 PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDK-- 106
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
M + P+ YN+ I C A+ + A ++ MV+ G+ P+ TYN F
Sbjct: 107 -----MLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGF 161
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSY 184
S + + +M G P+ + L+ LCK E A ++++ M ++G
Sbjct: 162 CSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTE-ARKIFDSMTKRGLKPD 220
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I L G LVE M+ G P+ F
Sbjct: 221 ITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVF 259
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 103/216 (47%), Gaps = 11/216 (5%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G+ P+ V+Y +IDV CK +VE A E+M DE + PD I Y S+I L + +
Sbjct: 282 MRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDK 341
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA ++ EM + G +N+ I ++C R+ ++ L D MV G+ P+ T
Sbjct: 342 WEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIITLG- 400
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
ND + +L+ G +PN + + + Q +E QL+ M + G
Sbjct: 401 -------RND--EAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNG 451
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGH 216
+ + + L G++ A ++L MI++ H
Sbjct: 452 CTVDSGMLNFIVRELLQRGEITRA-GTYLSMIDEKH 486
>gi|326525465|dbj|BAJ88779.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 680
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 118/241 (48%), Gaps = 6/241 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G +P +V+Y L++ CK +A ++++MR + +P++++Y II G+ G+
Sbjct: 178 MLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGR 237
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A+++L + YG PD +Y ++ C A+R D L EMV+K PN T+++
Sbjct: 238 VDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDM 297
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
R F + + + +M GC PNT C ++ +Q +V+ A N+M G
Sbjct: 298 LVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYG 357
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI------KALMELAN 234
+ + LC G+ A++ EM+ K P++V+F K L+E A
Sbjct: 358 CNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAI 417
Query: 235 K 235
K
Sbjct: 418 K 418
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 124/282 (43%), Gaps = 14/282 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G P+IV+YN +I+ C++ +V+ A +I+ ++ PD++SYT+++ GL +
Sbjct: 213 MRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARR 272
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D + + EM + C P+ ++ +R +C + A ++ +M + G +PN T N+
Sbjct: 273 WDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNI 332
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ +++ M GC P+T S +++ R + E A +L +MV K
Sbjct: 333 VINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKN 392
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR----------RIKALM 230
+ + +LC G + +A K M E G V++ R+ + +
Sbjct: 393 CPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSAL 452
Query: 231 ELANKQEALQNLSNKMALFGPSMIPKR----EEYLAEMSASD 268
EL N N L +R E LAEM D
Sbjct: 453 ELFNNLPCEPNTITYTTLLTGLCHAERLDAAAELLAEMIQKD 494
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 115/254 (45%), Gaps = 5/254 (1%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P+ V++N I + C+ +E+A K++E M + S +++Y +++ G + G+ D A ++
Sbjct: 395 PNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALEL 454
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
+ C P+ Y + C A+RL A+ L+ EM++K NA T+N+ F
Sbjct: 455 FNNLP---CEPNTITYTTLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQ 511
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ + L +MM GC PN + L+ + E AL+L + +V KG +
Sbjct: 512 KGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTIT 571
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMA 247
+ D+L + EA + + + G +P + +I L L + E Q +
Sbjct: 572 YSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKI--LFALCKRCETDQAIDFFAY 629
Query: 248 LFGPSMIPKREEYL 261
+ +P Y+
Sbjct: 630 MVSNGCMPNESTYI 643
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/181 (19%), Positives = 87/181 (48%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
+ V++N L+ +C+ VE+A ++V +M + +P++I++ +++ G+ ++A ++L
Sbjct: 498 NAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELL 557
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
+ G D Y++ + R +A ++ + + G+ P YN
Sbjct: 558 HGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKR 617
Query: 129 NDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVS 188
+ + + + M+ GC+PN + + L++ + ++ A + +++ KG S L+
Sbjct: 618 CETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSELYAKGVLSKSLLE 677
Query: 189 D 189
D
Sbjct: 678 D 678
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 58/118 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G P+++++N L+D KD E+A +++ + + +S D I+Y+S++ L +
Sbjct: 525 MMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDR 584
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
++A +L +++ G P YN + C A MV G PN +TY
Sbjct: 585 TEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTY 642
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 86/228 (37%), Gaps = 35/228 (15%)
Query: 54 GLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSP 113
G + R M + GC P Y + C + +A ++DEM KG +P
Sbjct: 161 GASATAEGSATRSPCSTMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTP 220
Query: 114 NATTYNLFF-------RV------------FYWSNDLRS------------SWN----LY 138
N TYN+ RV + + D+ S W+ L+
Sbjct: 221 NIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLF 280
Query: 139 CRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDM 198
M+ C+PN + LV+ R VE A+Q+ M + G + +++ + +C
Sbjct: 281 AEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQ 340
Query: 199 GKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKM 246
G++ +A M G P +S+ + + A + E + L +M
Sbjct: 341 GRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEM 388
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 92/212 (43%), Gaps = 6/212 (2%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
+P+ ++Y L+ C +++ A +++ +M +D + +++ ++ G ++A +
Sbjct: 461 EPNTITYTTLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAME 520
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
++ +M E+GC P+ +N + +A L+ +V KG+S + TY+ V
Sbjct: 521 LVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLS 580
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMF---LVKLCKRQEKVEIALQLWNDMVEKGFGS 183
+ + + + G P M+ L LCKR E + A+ + MV G
Sbjct: 581 REDRTEEAIQMLHAVQDMGMRPKVG--MYNKILFALCKRCE-TDQAIDFFAYMVSNGCMP 637
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
+L + L G L EA E+ KG
Sbjct: 638 NESTYIILIEGLAHEGLLKEARYVLSELYAKG 669
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 54/107 (50%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV D ++Y+ ++DV ++ + E+A +++ ++D + P V Y I+ L + D+A
Sbjct: 564 GVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQA 623
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGL 111
D M GC P+ + Y I L++A ++ E+ KG+
Sbjct: 624 IDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSELYAKGV 670
>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Brachypodium distachyon]
Length = 938
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 117/237 (49%), Gaps = 3/237 (1%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
D+V +N L+D YCK +E A+ + E+M+ + + DV+ Y S++ GL G+ D ARD++
Sbjct: 173 DVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMV 232
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
MK G P+ Y I YC + DA L +EMV KG+ P+ T +
Sbjct: 233 DTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKD 292
Query: 129 NDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
++ L+ M G PN + CM + L K Q E +L L ++V +G +++
Sbjct: 293 GRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNE-SLSLLGEVVSRGVVMDLIM 351
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEALQNLS 243
L D LC GK+ EA+ F + H P+ V++ I AL + N A Q LS
Sbjct: 352 YTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLS 408
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 106/226 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ DI YN L+ V C + KA ++E+M I+PD I++ ++I G G
Sbjct: 690 MMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGH 749
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A +M +G P+ A +N + A R+ ++ +++EM ++G+ P+ TY++
Sbjct: 750 LDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDI 809
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ + LYC M+G G LP + L+ + + A +L+N+M +G
Sbjct: 810 LVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRG 869
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
D+L + E K +M EKG PS+ + I
Sbjct: 870 VLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKGTLSSI 915
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 127/266 (47%), Gaps = 4/266 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G+KPD V+YN +I ++ + KA K++ M+ I P++I+Y+++I GL G
Sbjct: 585 MQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGA 644
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA+ +L EM G P + + ++ +R + + M+ GL + T YN
Sbjct: 645 VEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADITVYNT 704
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
RV ++ R + + M G G P+T + L+ + ++ A ++ M+ G
Sbjct: 705 LVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHG 764
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEAL 239
+ + L L G++ E++ EM ++G +PS +++ + + +NK EA+
Sbjct: 765 ISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAV 824
Query: 240 QNLSNKMALFGPSMIPKREEYLAEMS 265
+ + G +PK Y A +S
Sbjct: 825 RLYCE---MVGKGFLPKVSTYNALIS 847
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 122/279 (43%), Gaps = 21/279 (7%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P+ V+Y LID CK V+ A +++ +M ++ ISP+V++++SII GL G KA D
Sbjct: 382 PNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDY 441
Query: 68 LKEMKEYGCYPDAAAYNAAIRNY--CIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
++EMKE G P+ Y I C+ + A + EM+ +G+ N +
Sbjct: 442 MREMKERGIDPNVVTYGTVIDGSFKCLGQEA--ALDVYHEMLCEGVEVNKFIVDSLVNGL 499
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ + + L+ M G L + + L+ + + A ++ ++ EK
Sbjct: 500 KKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDA 559
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNK 245
+V +V + LC +GK EAE EM G KP QV++ + A K L N
Sbjct: 560 VVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNG 619
Query: 246 M-----------------ALFGPSMIPKREEYLAEMSAS 267
M LF + K + L EMS+S
Sbjct: 620 MKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSS 658
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 103/223 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E GV D V+Y LID K + A+K+ +++ ++++ PD + Y I L ++G+
Sbjct: 515 MNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGK 574
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A L+EM+ G PD YN I + A L++ M + PN TY+
Sbjct: 575 SKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYST 634
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + + L M +G P + + +++ C + + ++ L++ M+ G
Sbjct: 635 LIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAG 694
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ I V + L +LC G +A EM +G P ++F
Sbjct: 695 LCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITF 737
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 109/226 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ GV+P++V+Y I YC+ V+ A+ + E+M + + PDV++ ++++GGL G+
Sbjct: 235 MKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGR 294
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + +EM++ G P+ Y I A+R ++ L+ E+V +G+ + Y
Sbjct: 295 FSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTA 354
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + +++ + PN + L+ + V+ A Q+ ++M EK
Sbjct: 355 LMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKS 414
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ + + L G + +A EM E+G P+ V++ +
Sbjct: 415 ISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTV 460
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 97/226 (42%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E G+ P++V+Y +ID K E A + +M E + + S++ GL G+
Sbjct: 445 MKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGK 504
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA + +EM E G D Y I L A + E+ EK L P+A YN+
Sbjct: 505 IEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNV 564
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + + + M TG P+ + ++ R+ K AL+L N M
Sbjct: 565 FINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSS 624
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ L L + G + +A+ EM G P+ ++ RR+
Sbjct: 625 IKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRV 670
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 110/276 (39%), Gaps = 36/276 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISP----------------- 43
M GV PD+V+ + L+ CKD + +AY + +M +P
Sbjct: 270 MVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQR 329
Query: 44 ------------------DVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNA 85
D+I YT+++ L G+ D+A+D+ + P+ Y
Sbjct: 330 GNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTV 389
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
I C A + A ++ EM EK +SPN T++ + + + M G
Sbjct: 390 LIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERG 449
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
PN + ++ + E AL ++++M+ +G + D L + L GK+ +AE
Sbjct: 450 IDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAE 509
Query: 206 KSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQ 240
F EM E+G V++ I L + N A +
Sbjct: 510 ALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFK 545
>gi|18071401|gb|AAL58260.1|AC068923_2 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 627
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 122/242 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + + P++V+YN +I CK + V+KA +++ M + PD ++Y SI+ G GQ
Sbjct: 107 MLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQ 166
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
P +A LK+M+ G PD YN+ + C R +A + D M ++GL P+ TTY
Sbjct: 167 PKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGT 226
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + L L M+ G PN LV +QEKVE A+ +++ M ++G
Sbjct: 227 LLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQG 286
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ + D+LC G++ +A F +MI++G +P + + + + + +K E +
Sbjct: 287 LNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAE 346
Query: 241 NL 242
L
Sbjct: 347 EL 348
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 114/226 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV PD ++YN ++ +C Q ++A ++KMR + + PDV++Y S++ L G+
Sbjct: 142 MVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGR 201
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR + M + G PD Y ++ Y L + GL+D MV G+ PN +++
Sbjct: 202 CTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSI 261
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + ++ +M G PN + ++ + + +VE A+ + M+++G
Sbjct: 262 LVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEG 321
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+V + L LC K +AE+ FLEM+++G S + F I
Sbjct: 322 LRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSI 367
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 113/246 (45%), Gaps = 23/246 (9%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G+ P+ V+Y +IDV CK +VE A E+M DE + PD I Y S+I L + +
Sbjct: 282 MRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDK 341
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT--- 117
+KA ++ EM + G +N+ I ++C R+ ++ L D MV G+ P+ T
Sbjct: 342 WEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIITLGR 401
Query: 118 --------YNLFFRVFYWSNDLRSSWN----LYCRMMGTGCLPNTQSCMFLVK------- 158
Y+LF +++ ++ ++ + G N+ FL
Sbjct: 402 FLGSARRDYSLFVNIYFIFTNMSNTGDKEKETPVNTNGGNTASNSSGGPFLGTYNIILHG 461
Query: 159 LCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
LCK + + AL+++ ++ +++ D L +G+ EA+ F+ G P
Sbjct: 462 LCKNK-LTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVP 520
Query: 219 SQVSFR 224
+ ++R
Sbjct: 521 NYWTYR 526
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 98/219 (44%), Gaps = 11/219 (5%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDE--DISPDVISYTSIIGGLGLVGQPDKAR 65
PD+ SYN L++ C + + ++A +++ M D+ D PDV+SY+++I G G DK
Sbjct: 49 PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDK-- 106
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
M + P+ YN+ I C A+ + A ++ MV+ G+ P+ TYN F
Sbjct: 107 -----MLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGF 161
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSY 184
S + + +M G P+ + L+ LCK E A ++++ M ++G
Sbjct: 162 CSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTE-ARKIFDSMTKRGLKPD 220
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I L G LVE M+ G P+ F
Sbjct: 221 ITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVF 259
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 24/116 (20%), Positives = 50/116 (43%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P + +YN ++ CK++ + A ++ + + D+ + ++ +I L VG+ D+A+D+
Sbjct: 450 PFLGTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDL 509
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
G P+ Y N L + L M + G + ++ N R
Sbjct: 510 FVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVR 565
>gi|46091161|dbj|BAD13709.1| PPR protein [Oryza sativa Indica Group]
Length = 332
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 120/237 (50%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ P++V+YN +I CK + V+KA +++ M + PD ++Y SI+ G GQP +A
Sbjct: 43 ISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAI 102
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
LK+M+ G PD YN+ + C R +A + D M ++GL P+ TTY + +
Sbjct: 103 VFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGY 162
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
L L M+ G PN LV +QEKVE A+ +++ M ++G
Sbjct: 163 ATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNA 222
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNL 242
+ + D+LC G++ +A F +MI++G +P + + + + + +K E + L
Sbjct: 223 VTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEEL 279
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 114/226 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV PD ++YN ++ +C Q ++A ++KMR + + PDV++Y S++ L G+
Sbjct: 73 MVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGR 132
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR + M + G PD Y ++ Y L + GL+D MV G+ PN +++
Sbjct: 133 CTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSI 192
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + ++ +M G PN + ++ + + +VE A+ + M+++G
Sbjct: 193 LVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEG 252
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+V + L LC K +AE+ FLEM+++G S + F I
Sbjct: 253 LRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSI 298
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 65/117 (55%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G+ P+ V+Y +IDV CK +VE A E+M DE + PD I Y S+I L + +
Sbjct: 213 MRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDK 272
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
+KA ++ EM + G +N+ I ++C R+ ++ L D MV G+ P+ T
Sbjct: 273 WEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESVKLFDLMVRIGVKPDIIT 329
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 98/225 (43%), Gaps = 35/225 (15%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+KPDI +Y L+ Y + + + +++ M I P+ ++ ++ +
Sbjct: 143 MTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEK 202
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A V +M++ G P+A Y I C + R+ DA ++M+++GL P++ YN
Sbjct: 203 VEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNS 262
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
C+F +K E A +L+ +M+++G
Sbjct: 263 LIHSL---------------------------CIF--------DKWEKAEELFLEMLDRG 287
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR 225
+ + + D C G+++E+ K F M+ G KP ++ R
Sbjct: 288 ICLSTIFFNSIIDSHCKEGRVIESVKLFDLMVRIGVKPDIITLGR 332
>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
Length = 668
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 113/223 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G +P++V+Y L++ CK+ E+A ++++MR + +P++++Y II G+ G+
Sbjct: 168 MLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGR 227
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D ARD+L + YGC PD +Y ++ C +KR D L EM+EK PN T+++
Sbjct: 228 VDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDM 287
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
R F + + + +M C NT C ++ +Q +V+ A + N+M G
Sbjct: 288 LIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYG 347
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + LC + +A++ EM+ P++V+F
Sbjct: 348 CNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTF 390
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 100/223 (44%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
M V PD +Y LI V C +V A +++ M P+V++YT ++ + ++
Sbjct: 136 MPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQ 195
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
A VL EM+ GC P+ YN I C R+ DA L++ + G P+ +Y +
Sbjct: 196 AMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLK 255
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
S L+ MM C+PN + L++ R VE A+Q+ M E +
Sbjct: 256 GLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECAT 315
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ +++ + +C G++ +A K M G P +S+ +
Sbjct: 316 NTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTV 358
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 111/259 (42%), Gaps = 34/259 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E P+ V+++ LI +C+ VE+A +++++M + + + + +I + G+
Sbjct: 273 MMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGR 332
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A L M YGC PD +Y ++ C A+R DA L+ EMV PN T+N
Sbjct: 333 VDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNT 392
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCL--------------------------------P 148
F + + + L +M GC P
Sbjct: 393 FICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCKP 452
Query: 149 NTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKS 207
NT + L LC E+++ A +L +M+ + ++ +VL + C G L EA +
Sbjct: 453 NTITYTTLLTGLCN-AERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIEL 511
Query: 208 FLEMIEKGHKPSQVSFRRI 226
+M+E G P+ +++ +
Sbjct: 512 VEQMMEHGCTPNLITYNTL 530
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 107/223 (47%), Gaps = 3/223 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E G +V+YN L++ +C ++ A +E R P+ I+YT+++ GL +
Sbjct: 413 MQEHGCTVGVVTYNALVNGFCVQGHIDSA---LELFRSMPCKPNTITYTTLLTGLCNAER 469
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A +++ EM C P+ +N + +C L +A L+++M+E G +PN TYN
Sbjct: 470 LDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNT 529
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + L ++ G P+ + ++ + ++++VE A+Q+++ + G
Sbjct: 530 LFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIG 589
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
LV + + LC ++ A M+ G P++ ++
Sbjct: 590 MRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNESTY 632
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 99/213 (46%), Gaps = 9/213 (4%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G D+ +YN L+ YC+ ++ A +++ M ++PD +YT +I L G+ A
Sbjct: 105 GSPVDVFAYNTLVAGYCRYGHLDAARRLIGSM---PVAPDAYTYTPLIRVLCDRGRVADA 161
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+L +M GC P+ Y + C A ++DEM KG +PN TYN+
Sbjct: 162 LSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIING 221
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LC--KRQEKVEIALQLWNDMVEKGF 181
+ + +L R+ GC P+T S L+K LC KR + VE +L+ +M+EK
Sbjct: 222 MCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVE---ELFAEMMEKNC 278
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEK 214
+ D+L C G + A + +M E
Sbjct: 279 MPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEH 311
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 101/223 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G P+IV+YN +I+ C++ +V+ A ++ ++ PD +SYT+++ GL +
Sbjct: 203 MRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKR 262
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D ++ EM E C P+ ++ IR +C + A ++ +M E + N T N+
Sbjct: 263 WDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNI 322
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ M GC P+T S ++K R E+ A +L +MV
Sbjct: 323 VINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNN 382
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + +LC G + +A +M E G V++
Sbjct: 383 CPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTY 425
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/182 (20%), Positives = 92/182 (50%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P++V++N L++ +C+ +++A ++VE+M + +P++I+Y ++ G+ + A ++
Sbjct: 487 PNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALEL 546
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L + G PD +++ I R+ +A + + G+ P A YN
Sbjct: 547 LHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLGLCK 606
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+++ ++ + M+ GC+PN + + L++ R+ ++ A L + + +G S L+
Sbjct: 607 RHEIDNAIDFLAYMVSNGCMPNESTYIILIEGLAREGLLKEAQDLLSMLCSRGVVSKNLI 666
Query: 188 SD 189
+
Sbjct: 667 EE 668
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 90/228 (39%), Gaps = 33/228 (14%)
Query: 29 AYKIVEKMRDEDI-SPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAI 87
A ++VE D +PDV T +I L G+ A VL+ + G D AYN +
Sbjct: 58 AARLVELSASRDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLV 117
Query: 88 RNYC------IAKRL--------------------------RDASGLMDEMVEKGLSPNA 115
YC A+RL DA L+D+M+ +G PN
Sbjct: 118 AGYCRYGHLDAARRLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNV 177
Query: 116 TTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWND 175
TY + ++ + + M GC PN + ++ R+ +V+ A L N
Sbjct: 178 VTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNR 237
Query: 176 MVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ G + L LC + + E+ F EM+EK P++V+F
Sbjct: 238 LFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTF 285
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 54/107 (50%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV PD+++++ +I + K+ +VE+A ++ +D + P + Y I+ GL + D A
Sbjct: 554 GVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLGLCKRHEIDNA 613
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGL 111
D L M GC P+ + Y I L++A L+ + +G+
Sbjct: 614 IDFLAYMVSNGCMPNESTYIILIEGLAREGLLKEAQDLLSMLCSRGV 660
>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 669
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 112/223 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G +P +V+Y L++ CK +A ++++MR + +P++++Y II G+ G+
Sbjct: 167 MLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGR 226
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A+++L + YG PD +Y ++ C A+R D L EMV+K PN T+++
Sbjct: 227 VDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDM 286
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
R F + + + +M GC PNT C ++ +Q +V+ A N+M G
Sbjct: 287 LVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYG 346
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + LC G+ A++ EM+ K P++V+F
Sbjct: 347 CNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTF 389
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 123/277 (44%), Gaps = 10/277 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G P+IV+YN +I+ C++ +V+ A +I+ ++ PD++SYT+++ GL +
Sbjct: 202 MRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARR 261
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D + + EM + C P+ ++ +R +C + A ++ +M + G +PN T N+
Sbjct: 262 WDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNI 321
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ +++ M GC P+T S +++ R + E A +L +MV K
Sbjct: 322 VINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKN 381
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR----------RIKALM 230
+ + +LC G + +A K M E G V++ R+ + +
Sbjct: 382 CPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSAL 441
Query: 231 ELANKQEALQNLSNKMALFGPSMIPKREEYLAEMSAS 267
EL N N L +R + AE+ A
Sbjct: 442 ELFNNLPCEPNTITYTTLLTGLCHAERLDAAAELLAG 478
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 99/219 (45%), Gaps = 3/219 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PD+ LI C+ + A +++ DV +Y +++ G G+ D A
Sbjct: 69 GEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTLVAGYCRYGRLDAA 128
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
R ++ M PDA Y IR C R+ DA L+D+M+++G P+ TY +
Sbjct: 129 RRLIASMP---VPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEA 185
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
S+ + N+ M GC PN + ++ R+ +V+ A ++ N + GF
Sbjct: 186 VCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPD 245
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I+ + LC + + + F EM++K P++V+F
Sbjct: 246 IVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTF 284
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 114/254 (44%), Gaps = 5/254 (1%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P+ V++N I + C+ +E+A K++E M + S +++Y +++ G + G+ D A ++
Sbjct: 384 PNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALEL 443
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
+ C P+ Y + C A+RL A+ L+ M++K NA T+N+ F
Sbjct: 444 FNNLP---CEPNTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQ 500
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ + L +MM GC PN + L+ + E AL+L + +V KG +
Sbjct: 501 KGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTIT 560
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMA 247
+ D+L + EA + + + G +P + +I L L + E Q +
Sbjct: 561 YSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKI--LFALCKRCETDQAIDFFAY 618
Query: 248 LFGPSMIPKREEYL 261
+ +P Y+
Sbjct: 619 MVSNGCMPNESTYI 632
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/181 (19%), Positives = 87/181 (48%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
+ V++N L+ +C+ VE+A ++V +M + +P++I++ +++ G+ ++A ++L
Sbjct: 487 NAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELL 546
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
+ G D Y++ + R +A ++ + + G+ P YN
Sbjct: 547 HGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKR 606
Query: 129 NDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVS 188
+ + + + M+ GC+PN + + L++ + ++ A + +++ KG S L+
Sbjct: 607 CETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSELYAKGVLSKSLLE 666
Query: 189 D 189
D
Sbjct: 667 D 667
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 58/118 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G P+++++N L+D KD E+A +++ + + +S D I+Y+S++ L +
Sbjct: 514 MMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDR 573
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
++A +L +++ G P YN + C A MV G PN +TY
Sbjct: 574 TEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTY 631
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 94/216 (43%), Gaps = 14/216 (6%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
+P+ ++Y L+ C +++ A +++ M +D + +++ ++ G ++A +
Sbjct: 450 EPNTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAME 509
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
++ +M E+GC P+ +N + +A L+ +V KG+S + TY+ V
Sbjct: 510 LVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLS 569
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMF---LVKLCKRQEKVEIALQLWNDMVEKGF-- 181
+ + + + G P M+ L LCKR E + A+ + MV G
Sbjct: 570 REDRTEEAIQMLHAVQDMGMRPKVG--MYNKILFALCKRCE-TDQAIDFFAYMVSNGCMP 626
Query: 182 --GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
+YI +L + L G L EA E+ KG
Sbjct: 627 NESTYI----ILIEGLAHEGLLKEARYVLSELYAKG 658
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 54/107 (50%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV D ++Y+ ++DV ++ + E+A +++ ++D + P V Y I+ L + D+A
Sbjct: 553 GVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQA 612
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGL 111
D M GC P+ + Y I L++A ++ E+ KG+
Sbjct: 613 IDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSELYAKGV 659
>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
Length = 611
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 123/225 (54%), Gaps = 4/225 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E V P+ V++N LID +CKD + A K+ E+M+ + + P V++Y S++ GL G+
Sbjct: 294 MVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGK 353
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A+ +L EM P+ YNA I YC K L +A L D + ++GL+PN T+N
Sbjct: 354 LNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNT 413
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPN--TQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
+ + ++ L M+ G LPN T +C+ +V C R+ K+E L N+M
Sbjct: 414 LLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCL-IVGFC-REGKMEEVKNLLNEMQC 471
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+G + + ++L C+ + +A + EM++KG KPS +++
Sbjct: 472 RGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTY 516
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 121/230 (52%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +KP++++YN LI+ YCK + +E+A ++ + + + ++P+VI++ +++ G G+
Sbjct: 364 MLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGK 423
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A + K M E G P+A+ YN I +C ++ + L++EM +G+ + TYN+
Sbjct: 424 MEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNI 483
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + + L M+ G P+ + L+ + + AL L M ++G
Sbjct: 484 LISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEG 543
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALM 230
+ ++ +VL C GKL +A EM+EKG P++ ++ IK M
Sbjct: 544 RWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEM 593
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 123/248 (49%), Gaps = 3/248 (1%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGG---LGLVGQPD 62
+ P+++++N +I+ CK ++ KA +V+ M+ P+V++Y ++I G +G VG+
Sbjct: 226 ISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMY 285
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
KA +LKEM E P++ +N I +C + L A + +EM +GL P TYN
Sbjct: 286 KADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLV 345
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
L + L M+ + PN + L+ +++ +E A +L++++ ++G
Sbjct: 346 NGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLT 405
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNL 242
++ + L C GK+ EA M+EKG P+ ++ + K E ++NL
Sbjct: 406 PNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNL 465
Query: 243 SNKMALFG 250
N+M G
Sbjct: 466 LNEMQCRG 473
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 110/223 (49%), Gaps = 3/223 (1%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
K ++S N L+ K+ + + ++M ISP++I++ ++I GL VG+ +KA D
Sbjct: 192 KLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGD 251
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKR---LRDASGLMDEMVEKGLSPNATTYNLFFR 123
V+ +MK +G +P+ YN I YC R + A ++ EMVE +SPN+ T+N+
Sbjct: 252 VVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLID 311
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
F +L ++ ++ M G P + LV + K+ A L ++M+
Sbjct: 312 GFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKP 371
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ + L + C L EA + F + ++G P+ ++F +
Sbjct: 372 NVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTL 414
>gi|297844992|ref|XP_002890377.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336219|gb|EFH66636.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 537
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 127/251 (50%), Gaps = 1/251 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G++P++ +Y+ +ID C+ Q+ +A+ + M D +P+ I++ +++ G+
Sbjct: 281 MKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGR 340
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
P+K V +MK+ GC PD YN I +C + L +A +++ M++K NA+T+N
Sbjct: 341 PEKVLQVYNQMKKLGCEPDTITYNFLIETHCRDENLENAVKVLNTMIKKKCEVNASTFNT 400
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
FR D+ + +Y +MM C PNT + L+++ + ++ L++ DM +K
Sbjct: 401 IFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFAGSKSTDMVLKMKKDMDDKE 460
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMI-EKGHKPSQVSFRRIKALMELANKQEAL 239
+ +L + C MG A K F EM+ EK PS + + A + A + +
Sbjct: 461 VEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKH 520
Query: 240 QNLSNKMALFG 250
+ L KM G
Sbjct: 521 EELVEKMIQKG 531
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 105/246 (42%), Gaps = 1/246 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ V+ I ++ LI Y + +A +M D PD I+++ +I L +
Sbjct: 177 MKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDQIAFSIVISNLSRKRR 236
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A+ +K+ PD Y +R +C A + +A + +M G+ PN TY++
Sbjct: 237 ASEAQSFFDSLKDR-FEPDVIVYTNLVRGWCRAGEISEAEKVFKDMKLAGIEPNVYTYSI 295
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + +++ M+ +GC PN + L+++ + + E LQ++N M + G
Sbjct: 296 VIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRPEKVLQVYNQMKKLG 355
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ + L + C L A K MI+K + + +F I +E
Sbjct: 356 CEPDTITYNFLIETHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAH 415
Query: 241 NLSNKM 246
+ +KM
Sbjct: 416 RMYSKM 421
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 97/238 (40%), Gaps = 36/238 (15%)
Query: 13 YNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMK 72
YN +ID+ K RQ + A+ +++ M+ ++ + ++T +I G +A M+
Sbjct: 154 YNEMIDLAGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME 213
Query: 73 EYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLR 132
+YGC PD A++ I N +R +A D + ++ P+ Y R
Sbjct: 214 DYGCVPDQIAFSIVISNLSRKRRASEAQSFFDSLKDR-FEPDVIVYTNLVR--------- 263
Query: 133 SSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLF 192
W C+ E E A +++ DM G + ++
Sbjct: 264 -GW------------------------CRAGEISE-AEKVFKDMKLAGIEPNVYTYSIVI 297
Query: 193 DLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFG 250
D LC G++ A F +M++ G P+ ++F + + A + E + + N+M G
Sbjct: 298 DALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRPEKVLQVYNQMKKLG 355
>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 138/260 (53%), Gaps = 9/260 (3%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ P+ +++N LID +C+D V A K+ E+M+ + + P+V++Y S+I GL G+ D+A
Sbjct: 295 IHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEAL 354
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+ +M G P+ YNA I +C K L++A ++D++ ++GL+PN T+N +
Sbjct: 355 GLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAY 414
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPN--TQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
+ + ++ L M+ TG PN T +C+ +V C R+ V+ A +L +M G +
Sbjct: 415 GKAGRMDDAFLLRSMMLDTGVCPNVSTYNCL-IVGFC-REGNVKEARKLAKEMEGNGLKA 472
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMI---EKGHKPSQVSFRRIKALMELANKQEALQ 240
++ ++L D LC G+ +A + EM +KG + + V++ + K E
Sbjct: 473 DLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEAN 532
Query: 241 NLSNKMALFGPSMIPKREEY 260
L N+M G +IP R Y
Sbjct: 533 RLLNEMLEKG--LIPNRTTY 550
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 111/223 (49%), Gaps = 4/223 (1%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
R +GV ++V+++ +I+ CK + +KA +VE M+ SP VI+Y +II G G+
Sbjct: 223 RRIGV--NVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKM 280
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
KA +LKEM +P+ +N I +C + + A + +EM +GL PN TYN
Sbjct: 281 FKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSL 340
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKG 180
+ L + L +M G G PN + L+ CK++ E A ++ +D+ ++G
Sbjct: 341 INGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKE-AREMLDDIGKRG 399
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + L D G++ +A M++ G P+ ++
Sbjct: 400 LAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTY 442
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 110/221 (49%), Gaps = 19/221 (8%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M MG+KP++V+YN LI+ +CK + +++A ++++ + ++P+VI++ ++I G G+
Sbjct: 360 MSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGR 419
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A + M + G P+ + YN I +C +++A L EM GL + TYN+
Sbjct: 420 MDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNI 479
Query: 121 FFRVFYWSNDLRSSWNLYCRMM---GTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
+ R + L M G N + L+K + K+E A +L N+M+
Sbjct: 480 LVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEML 539
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
EKG ++ + +D+L D EM+EKG P
Sbjct: 540 EKG----LIPNRTTYDILRD------------EMMEKGFIP 564
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 106/222 (47%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G + +S N ++ K+ ++ + ++M I +V+++ +I GL VG+ KA
Sbjct: 189 GFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKA 248
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
DV+++MK +G P YN I YC A ++ A L+ EMV K + PN T+N+
Sbjct: 249 GDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDG 308
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
F ++ ++ ++ M G PN + L+ K++ AL L + M G
Sbjct: 309 FCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPN 368
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ + L + C L EA + ++ ++G P+ ++F +
Sbjct: 369 VVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTL 410
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 88/208 (42%)
Query: 16 LIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYG 75
L+ Y K+ +++ A + ++ D +S ++ L G+ V KEM
Sbjct: 165 LVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRR 224
Query: 76 CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSW 135
+ ++ I C + + A ++++M G SP+ TYN + + + +
Sbjct: 225 IGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKAD 284
Query: 136 NLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLL 195
L M+ PN + L+ R E V A +++ +M +G ++ + L + L
Sbjct: 285 ALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGL 344
Query: 196 CDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
C GKL EA +M G KP+ V++
Sbjct: 345 CSNGKLDEALGLQDKMSGMGLKPNVVTY 372
>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
Length = 529
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 124/231 (53%), Gaps = 7/231 (3%)
Query: 1 MREM---GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGL 57
++EM G+ P+ V+YN LID +CKD V A ++ +M+ + + P+V++Y +I GL
Sbjct: 216 LKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCS 275
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
G+ D+A + +M P+ +N I +C K + +A L ++M ++G+ PNA T
Sbjct: 276 DGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMT 335
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLP--NTQSCMFLVKLCKRQEKVEIALQLWND 175
Y + + ++ LY M+ G P +T +C+ + LC R+ V+ A L N+
Sbjct: 336 YTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCL-IAGLC-RKGDVKAARSLMNE 393
Query: 176 MVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
MV K + ++ ++L D LC G+ +A K EM EKG PS V++ +
Sbjct: 394 MVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTL 444
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 129/261 (49%), Gaps = 4/261 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G++P++V+YN LI+ C D +V++A + ++M D+ P+V+++ +I G
Sbjct: 254 MQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKT 313
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A ++ +M++ G P+A Y I YC R+ DA L + M+++G+ P +TYN
Sbjct: 314 VNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNC 373
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEK 179
D++++ +L M+ + + L+ LCK+ E + A++L ++M EK
Sbjct: 374 LIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRK-AVKLLDEMFEK 432
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
G + + L D C G L A M KG + + V+ + L + E
Sbjct: 433 GLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDA 492
Query: 240 QNLSNKMALFGPSMIPKREEY 260
L N+M G ++P R Y
Sbjct: 493 NGLLNEMLERG--LVPNRTTY 511
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 112/225 (49%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
++P++V++N LI+ +CK++ V +A + M + + P+ ++YT++I G+ + A
Sbjct: 294 LEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAF 353
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+ M + G +P+ + YN I C ++ A LM+EMV K LS + TYN+
Sbjct: 354 ALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSL 413
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ R + L M G P+ + L+ R+ + AL + M KG + +
Sbjct: 414 CKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANV 473
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALM 230
+ +VL C G+L +A EM+E+G P++ ++ IK M
Sbjct: 474 VTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEIIKEEM 518
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 106/222 (47%), Gaps = 3/222 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G K ++S N L+ K+ + + +M I +VIS+ ++ GL VG+ ++A
Sbjct: 115 GFKLSLISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRA 174
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLR---DASGLMDEMVEKGLSPNATTYNLF 121
DV+++MK +G P+ YN I YC R+ A ++ EMV KG+ PN TYN+
Sbjct: 175 GDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNIL 234
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
F ++ + ++ M G PN + L+ KV+ A+ L + MV
Sbjct: 235 IDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDL 294
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ +VL + C + EA F +M ++G P+ +++
Sbjct: 295 EPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTY 336
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/210 (19%), Positives = 93/210 (44%), Gaps = 3/210 (1%)
Query: 16 LIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYG 75
L+ + ++ ++ + ++ ++ D +IS ++ GL + V +EM +
Sbjct: 91 LVLAFVRNLKILRGFEAFKRAGDYGFKLSLISCNPLLSGLVKESENGDMEFVYREMIKRK 150
Query: 76 CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSW 135
+ ++N + C +L A ++++M G+SPN TYN + + +
Sbjct: 151 IELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMY 210
Query: 136 N---LYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLF 192
+ M+ G PN + L+ + E V A++++ +M +G ++ ++L
Sbjct: 211 KADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILI 270
Query: 193 DLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
+ LC GK+ EA +M+ +P+ V+
Sbjct: 271 NGLCSDGKVDEAVALRDQMVSSDLEPNVVT 300
>gi|356517946|ref|XP_003527646.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Glycine max]
Length = 511
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 110/200 (55%), Gaps = 1/200 (0%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
KP + N LI C+ ++++A+K+++ +R PDVI+Y ++I GL L+ + D+AR
Sbjct: 174 KPVTYTVNILIRGLCRVGEIDEAFKLLKDLRSFGCLPDVITYNTLIHGLCLINEVDRARS 233
Query: 67 VLKEMKEYGCY-PDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+L+E+ G + PD +Y I YC +++ + S L DEM+ G +PN T+N F
Sbjct: 234 LLREVCLNGEFAPDVVSYTMIISGYCKLRKMEEGSLLFDEMINSGTAPNTFTFNALIDGF 293
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
D+ S+ LY +M+ GCLP+ + L+ R +V A+ +W+ M EK G+ +
Sbjct: 294 GKLGDMASALALYSKMLVQGCLPDVATFTSLINGHFRVRQVHQAMDMWHKMNEKNIGASL 353
Query: 186 LVSDVLFDLLCDMGKLVEAE 205
VL LC+ +L +A
Sbjct: 354 YTYSVLVSGLCNNNRLHKAR 373
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 105/229 (45%), Gaps = 11/229 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKM-RDEDISPDVISYTSIIGGLGLVG 59
+R G PD+++YN LI C +V++A ++ ++ + + +PDV+SYT II G +
Sbjct: 203 LRSFGCLPDVITYNTLIHGLCLINEVDRARSLLREVCLNGEFAPDVVSYTMIISGYCKLR 262
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ ++ + EM G P+ +NA I + + A L +M+ +G P+ T+
Sbjct: 263 KMEEGSLLFDEMINSGTAPNTFTFNALIDGFGKLGDMASALALYSKMLVQGCLPDVATFT 322
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LC--KRQEKVEIALQLWN-- 174
+ + + +++ +M + + LV LC R K L+L N
Sbjct: 323 SLINGHFRVRQVHQAMDMWHKMNEKNIGASLYTYSVLVSGLCNNNRLHKARDILRLLNES 382
Query: 175 DMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
D+V + F + + + D C G + EA K EM KP +++F
Sbjct: 383 DIVPQPF-----IYNPVIDGYCKSGNVDEANKIVAEMEVNRCKPDKLTF 426
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 76/161 (47%), Gaps = 6/161 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD+ ++ LI+ + + RQV +A + KM +++I + +Y+ ++ GL +
Sbjct: 309 MLVQGCLPDVATFTSLINGHFRVRQVHQAMDMWHKMNEKNIGASLYTYSVLVSGLCNNNR 368
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KARD+L+ + E P YN I YC + + +A+ ++ EM P+ T+ +
Sbjct: 369 LHKARDILRLLNESDIVPQPFIYNPVIDGYCKSGNVDEANKIVAEMEVNRCKPDKLTFTI 428
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLP------NTQSCMF 155
+ + + +M+ GC P N +SC+
Sbjct: 429 LIIGHCMKGRMPEAIGFFDKMLAVGCAPDEITVNNLRSCLL 469
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 103/243 (42%), Gaps = 5/243 (2%)
Query: 11 VSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKE 70
++Y+ L+ C+ A + + MR + PD ++ +VG+ D +R++L +
Sbjct: 73 LTYSLLLRSLCRSNLHHTAKVVYDWMRCDGQIPDNRLLGFLVSSYAIVGRLDVSRELLAD 132
Query: 71 MKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSND 130
++ +A YN ++ DA L E++ P T N+ R +
Sbjct: 133 VQCNNVGVNAVVYNDLFNVLIRQNKVVDAVVLFRELIRLRYKPVTYTVNILIRGLCRVGE 192
Query: 131 LRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKG-FGSYILVS 188
+ ++ L + GCLP+ + L+ LC E V+ A L ++ G F ++
Sbjct: 193 IDEAFKLLKDLRSFGCLPDVITYNTLIHGLCLINE-VDRARSLLREVCLNGEFAPDVVSY 251
Query: 189 DVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLSNKMA 247
++ C + K+ E F EMI G P+ +F I +L + AL L +KM
Sbjct: 252 TMIISGYCKLRKMEEGSLLFDEMINSGTAPNTFTFNALIDGFGKLGDMASALA-LYSKML 310
Query: 248 LFG 250
+ G
Sbjct: 311 VQG 313
Score = 40.8 bits (94), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 82/200 (41%), Gaps = 2/200 (1%)
Query: 29 AYKIVEKMRDE-DISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAI 87
+K VE R + +S ++Y+ ++ L A+ V M+ G PD +
Sbjct: 55 GFKFVEFSRHKLHMSHSYLTYSLLLRSLCRSNLHHTAKVVYDWMRCDGQIPDNRLLGFLV 114
Query: 88 RNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCL 147
+Y I RL + L+ ++ + NA YN F V N + + L+ ++
Sbjct: 115 SSYAIVGRLDVSRELLADVQCNNVGVNAVVYNDLFNVLIRQNKVVDAVVLFRELIRLRYK 174
Query: 148 PNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKS 207
P T + L++ R +++ A +L D+ G ++ + L LC + ++ A
Sbjct: 175 PVTYTVNILIRGLCRVGEIDEAFKLLKDLRSFGCLPDVITYNTLIHGLCLINEVDRARSL 234
Query: 208 FLEMIEKGH-KPSQVSFRRI 226
E+ G P VS+ I
Sbjct: 235 LREVCLNGEFAPDVVSYTMI 254
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 63/135 (46%), Gaps = 1/135 (0%)
Query: 111 LSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIAL 170
+S + TY+L R SN ++ +Y M G +P+ + FLV +++++
Sbjct: 68 MSHSYLTYSLLLRSLCRSNLHHTAKVVYDWMRCDGQIPDNRLLGFLVSSYAIVGRLDVSR 127
Query: 171 QLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKAL 229
+L D+ G +V + LF++L K+V+A F E+I +KP + I+ L
Sbjct: 128 ELLADVQCNNVGVNAVVYNDLFNVLIRQNKVVDAVVLFRELIRLRYKPVTYTVNILIRGL 187
Query: 230 MELANKQEALQNLSN 244
+ EA + L +
Sbjct: 188 CRVGEIDEAFKLLKD 202
>gi|357467093|ref|XP_003603831.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492879|gb|AES74082.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 530
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 130/251 (51%), Gaps = 1/251 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E GVKP++ +Y+ +ID C+ Q+ +A+ + +M D P+ +++ S++ G+
Sbjct: 273 MKEAGVKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGCDPNAVTFNSLMRVHVKAGR 332
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+K V +MK GC D +YN I ++C + L +A ++D MV+KG++PNA+T+N
Sbjct: 333 TEKVLQVYNQMKRLGCAADTISYNFLIESHCKDENLDEAVKVLDTMVKKGVAPNASTFNS 392
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F +D+ + +Y +M C+PNT + L+++ + +++ L+L +M E
Sbjct: 393 IFGCIAELHDVNGAHRMYAKMKELKCMPNTLTYNILMRMFADSKSIDMVLKLKKEMDESE 452
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMI-EKGHKPSQVSFRRIKALMELANKQEAL 239
+ +L + C+ G A EM+ EK KP+ + + L+ A + +
Sbjct: 453 VEPNVNTYRILILMFCEKGHWNNAYNLMKEMVEEKCLKPNLSIYETVLELLRNAGQLKKH 512
Query: 240 QNLSNKMALFG 250
+ L KM G
Sbjct: 513 EELVEKMVARG 523
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 112/223 (50%), Gaps = 1/223 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G KPD VS++ +I CK R+ +A + ++ + PDVI YTS++ G G
Sbjct: 204 MEDYGCKPDKVSFSIVISSLCKKRRASEAELFFDSLKHK-FEPDVIVYTSLVHGWCRAGD 262
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA +V +MKE G P+ Y+ I + C ++ A + EM++ G PNA T+N
Sbjct: 263 IAKAEEVFSDMKEAGVKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGCDPNAVTFNS 322
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
RV + +Y +M GC +T S FL++ + E ++ A+++ + MV+KG
Sbjct: 323 LMRVHVKAGRTEKVLQVYNQMKRLGCAADTISYNFLIESHCKDENLDEAVKVLDTMVKKG 382
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ +F + ++ + A + + +M E P+ +++
Sbjct: 383 VAPNASTFNSIFGCIAELHDVNGAHRMYAKMKELKCMPNTLTY 425
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 101/226 (44%), Gaps = 1/226 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ GV+ + +++ L+ Y + +A +M D PD +S++ +I L +
Sbjct: 169 MKSRGVRITVSTFSVLVRRYVRAGLAAEAVHAFNRMEDYGCKPDKVSFSIVISSLCKKRR 228
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A +K + PD Y + + +C A + A + +M E G+ PN TY++
Sbjct: 229 ASEAELFFDSLK-HKFEPDVIVYTSLVHGWCRAGDIAKAEEVFSDMKEAGVKPNVYTYSI 287
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + +++ M+ GC PN + L+++ + + E LQ++N M G
Sbjct: 288 VIDSLCRCGQITRAHDVFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLQVYNQMKRLG 347
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + + L + C L EA K M++KG P+ +F I
Sbjct: 348 CAADTISYNFLIESHCKDENLDEAVKVLDTMVKKGVAPNASTFNSI 393
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 96/238 (40%), Gaps = 36/238 (15%)
Query: 13 YNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMK 72
YN +ID+ K R + A+ +++ M+ + V +++ ++ G +A M+
Sbjct: 146 YNEMIDLAGKLRHFDLAWHLIDLMKSRGVRITVSTFSVLVRRYVRAGLAAEAVHAFNRME 205
Query: 73 EYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLR 132
+YGC PD +++ I + C +R +A D + K P+ Y L
Sbjct: 206 DYGCKPDKVSFSIVISSLCKKRRASEAELFFDSLKHK-FEPDVIVYT----------SLV 254
Query: 133 SSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLF 192
W C R + A ++++DM E G + ++
Sbjct: 255 HGW------------------------C-RAGDIAKAEEVFSDMKEAGVKPNVYTYSIVI 289
Query: 193 DLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFG 250
D LC G++ A F EMI+ G P+ V+F + + A + E + + N+M G
Sbjct: 290 DSLCRCGQITRAHDVFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLQVYNQMKRLG 347
>gi|255580475|ref|XP_002531063.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529358|gb|EEF31324.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 126/237 (53%), Gaps = 2/237 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G +PD+V+Y LI+ YCK R+ + A ++ +M ++ P + ++I GLG V +
Sbjct: 277 MKDEGFEPDVVTYGILINAYCKVRKYDDAIELFREMESKNCQPSPHIFCTLINGLGSVRR 336
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + + K G P+ YNA + YC + R+ DA ++DEM + G+ PN+ TY++
Sbjct: 337 LSEALEFFRRSKASGFAPETPTYNAVVGAYCWSMRIDDAYRMVDEMRKSGVGPNSRTYDI 396
Query: 121 FFRVFYWSNDLRSSWNLYCRMMG-TGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ +++++ +M C P + +V++ +KVE A+++W+ M K
Sbjct: 397 ILHHLIKAEKTTEAFSVFEKMSSEEECEPTVSTYDIIVRMFCNMDKVESAIKVWDRMKAK 456
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIK-ALMELANK 235
G + + +L + LC KL A K F EM++ G +P F +K AL+E K
Sbjct: 457 GVHPGMHMFSILINSLCHENKLDIACKYFQEMLDVGIRPPAALFSHLKQALIEDGRK 513
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 97/207 (46%), Gaps = 3/207 (1%)
Query: 47 SYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEM 106
SY ++I LG + Q + +++ +MK G + R Y + ++++A ++M
Sbjct: 149 SYNALIDSLGKIKQFNMIWNLVNDMKRKGVLT-KETFALISRRYARSGKVKEAMNTFEKM 207
Query: 107 VEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKV 166
+ GL +T +N S + S+ N++ +M +P+ +S L++ +++ +
Sbjct: 208 EKFGLKIESTDFNRLLDTLIKSRQVLSAQNVFDKMKIRRFVPDIKSYTILLEGWGQEKNL 267
Query: 167 EIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF-RR 225
+++ +M ++GF ++ +L + C + K +A + F EM K +PS F
Sbjct: 268 LKLDEVYREMKDEGFEPDVVTYGILINAYCKVRKYDDAIELFREMESKNCQPSPHIFCTL 327
Query: 226 IKALMELANKQEALQNL-SNKMALFGP 251
I L + EAL+ +K + F P
Sbjct: 328 INGLGSVRRLSEALEFFRRSKASGFAP 354
Score = 43.5 bits (101), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 41/225 (18%), Positives = 94/225 (41%), Gaps = 1/225 (0%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
++ G + SYN LID K +Q + +V M+ + + ++ I G+
Sbjct: 139 KQKGFMYNTESYNALIDSLGKIKQFNMIWNLVNDMKRKGVLTKE-TFALISRRYARSGKV 197
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
+A + ++M+++G ++ +N + ++++ A + D+M + P+ +Y +
Sbjct: 198 KEAMNTFEKMEKFGLKIESTDFNRLLDTLIKSRQVLSAQNVFDKMKIRRFVPDIKSYTIL 257
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
+ +L +Y M G P+ + L+ + K + A++L+ +M K
Sbjct: 258 LEGWGQEKNLLKLDEVYREMKDEGFEPDVVTYGILINAYCKVRKYDDAIELFREMESKNC 317
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ L + L + +L EA + F G P ++ +
Sbjct: 318 QPSPHIFCTLINGLGSVRRLSEALEFFRRSKASGFAPETPTYNAV 362
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/204 (18%), Positives = 77/204 (37%)
Query: 20 YCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPD 79
Y + +V++A EKM + + + ++ L Q A++V +MK PD
Sbjct: 191 YARSGKVKEAMNTFEKMEKFGLKIESTDFNRLLDTLIKSRQVLSAQNVFDKMKIRRFVPD 250
Query: 80 AAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYC 139
+Y + + K L + EM ++G P+ TY + + + L+
Sbjct: 251 IKSYTILLEGWGQEKNLLKLDEVYREMKDEGFEPDVVTYGILINAYCKVRKYDDAIELFR 310
Query: 140 RMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMG 199
M C P+ L+ ++ AL+ + GF + + C
Sbjct: 311 EMESKNCQPSPHIFCTLINGLGSVRRLSEALEFFRRSKASGFAPETPTYNAVVGAYCWSM 370
Query: 200 KLVEAEKSFLEMIEKGHKPSQVSF 223
++ +A + EM + G P+ ++
Sbjct: 371 RIDDAYRMVDEMRKSGVGPNSRTY 394
>gi|224109914|ref|XP_002333182.1| predicted protein [Populus trichocarpa]
gi|222835036|gb|EEE73485.1| predicted protein [Populus trichocarpa]
Length = 319
Score = 123 bits (308), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 116/226 (51%), Gaps = 5/226 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + PD V++N L+D CK ++ +A IV+ M ++ + P+ ++Y+S++ G L +
Sbjct: 1 MTSFIIMPDAVTFNILVDTLCKKGKISEAQGIVKTMIEKGVEPNTVTYSSLMNGYLLQNR 60
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR V M GC PD +YN I C A+R+ +A + DEM +GL PN TYN
Sbjct: 61 VFEARKVFNAMITRGCIPDVLSYNILINGCCKAQRIDEAKQIFDEMSFRGLIPNTATYNT 120
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F+ + L+ M GC P+ + + +Q ++ AL+L+ +M
Sbjct: 121 LLGGFW-----KQKIQLFKDMHAQGCSPDLVTYSIFLHGLSKQGYLDQALELFREMQNNY 175
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+++ ++L D +C GKL +A + FL++ KG P S+ I
Sbjct: 176 LNPDLVIYNILIDAMCKSGKLEDARELFLKLHVKGLLPDVRSWTSI 221
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 65/120 (54%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ + PD+V YN LID CK ++E A ++ K+ + + PDV S+TSII GL G
Sbjct: 171 MQNNYLNPDLVIYNILIDAMCKSGKLEDARELFLKLHVKGLLPDVRSWTSIISGLCREGL 230
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A ++M+ GC PD +YN +R + A L EM ++G S +A T L
Sbjct: 231 LDEAYKAFRQMERDGCPPDCCSYNVIVRGFLQNNGASRAEQLFQEMFDRGFSADALTRTL 290
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 99/226 (43%), Gaps = 5/226 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E GV+P+ V+Y+ L++ Y +V +A K+ M PDV+SY +I G +
Sbjct: 36 MIEKGVEPNTVTYSSLMNGYLLQNRVFEARKVFNAMITRGCIPDVLSYNILINGCCKAQR 95
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A+ + EM G P+ A YN + + + L +M +G SP+ TY++
Sbjct: 96 IDEAKQIFDEMSFRGLIPNTATYNTLLGGF-----WKQKIQLFKDMHAQGCSPDLVTYSI 150
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F L + L+ M P+ L+ + K+E A +L+ + KG
Sbjct: 151 FLHGLSKQGYLDQALELFREMQNNYLNPDLVIYNILIDAMCKSGKLEDARELFLKLHVKG 210
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + LC G L EA K+F +M G P S+ I
Sbjct: 211 LLPDVRSWTSIISGLCREGLLDEAYKAFRQMERDGCPPDCCSYNVI 256
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 30/225 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKM------------------------ 36
M G PD++SYN LI+ CK +++++A +I ++M
Sbjct: 71 MITRGCIPDVLSYNILINGCCKAQRIDEAKQIFDEMSFRGLIPNTATYNTLLGGFWKQKI 130
Query: 37 ------RDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNY 90
+ SPD+++Y+ + GL G D+A ++ +EM+ PD YN I
Sbjct: 131 QLFKDMHAQGCSPDLVTYSIFLHGLSKQGYLDQALELFREMQNNYLNPDLVIYNILIDAM 190
Query: 91 CIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNT 150
C + +L DA L ++ KGL P+ ++ L ++ + +M GC P+
Sbjct: 191 CKSGKLEDARELFLKLHVKGLLPDVRSWTSIISGLCREGLLDEAYKAFRQMERDGCPPDC 250
Query: 151 QSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLL 195
S +V+ + A QL+ +M ++GF + L + DLL
Sbjct: 251 CSYNVIVRGFLQNNGASRAEQLFQEMFDRGFSADALTRTLAADLL 295
>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
Length = 669
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 114/223 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G +P++V+Y L++ C++ E+A ++++MR + +P++++Y II G+ G+
Sbjct: 169 MLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGR 228
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D AR++L + YG PD +Y ++ C +KR D L EM+EK PN T+++
Sbjct: 229 VDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDM 288
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
R F + + + +M GC NT C ++ +Q +V+ A +L NDM G
Sbjct: 289 LIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYG 348
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + LC + +A++ EM+ P++V+F
Sbjct: 349 CNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTF 391
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 111/243 (45%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
M V PD +Y LI V C +V A +++ M P+V++YT ++ + ++
Sbjct: 137 MPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQ 196
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
A VL EM+ GC P+ YN I C R+ DA L++ + G P+ +Y +
Sbjct: 197 AMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLK 256
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
S L+ MM C+PN + L++ R VE A+Q+ M E G +
Sbjct: 257 GLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCAT 316
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLS 243
+ +++ + +C G++ +A K +M G P +S+ + + A + + + L
Sbjct: 317 NTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELL 376
Query: 244 NKM 246
N+M
Sbjct: 377 NEM 379
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 107/223 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G P+IV+YN +I+ C++ +V+ A +++ ++ PD +SYT+++ GL +
Sbjct: 204 MRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKR 263
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D ++ EM E C P+ ++ IR +C + A ++++M E G + N T N+
Sbjct: 264 WDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNI 323
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ L M GC P+T S ++K R E+ + A +L N+MV
Sbjct: 324 VINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNN 383
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + +LC G + +A +M E G V++
Sbjct: 384 CPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTY 426
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 105/219 (47%), Gaps = 3/219 (1%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P+ V++N I + C+ +E+A ++E+M + + V++Y +++ G + G D A ++
Sbjct: 386 PNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALEL 445
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
+ M C P+ Y + C A+RL A+ L+ EM+ PN T+N+ F
Sbjct: 446 FRSMP---CKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQ 502
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
L + L +MM GC PN + L+ + E AL+L + +V KG ++
Sbjct: 503 KGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVIT 562
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ +L ++ EA + F + + G +P V + +I
Sbjct: 563 FSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKI 601
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 102/223 (45%), Gaps = 3/223 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E P+ V+++ LI +C+ VE+A +++E+M + + + +I + G+
Sbjct: 274 MMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGR 333
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A +L +M YGC PD +Y ++ C A+R DA L++EMV PN T+N
Sbjct: 334 VDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNT 393
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + + + L +M GC + LV Q ++ AL+L+ M K
Sbjct: 394 FICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCK- 452
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ L LC+ +L A + EM+ P+ V+F
Sbjct: 453 --PNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTF 493
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 99/215 (46%), Gaps = 2/215 (0%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
R M KP+ ++Y L+ C +++ A ++V +M D P+V+++ ++ G
Sbjct: 447 RSMPCKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFL 506
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
++A +++++M E+GC P+ YN + DA L+ +V KG+SP+ T++
Sbjct: 507 EEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSI 566
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + + L+ + G P L+ LCKR E ++ A+ + MV G
Sbjct: 567 IGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCE-IDNAIDFFAYMVSNG 625
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
+L + L G L EA+ + +G
Sbjct: 626 CMPNESTYIILIEGLAHEGLLKEAQDLLSVLCSRG 660
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 71/147 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G P++++YN L+D KD E A +++ + + +SPDVI+++SIIG L +
Sbjct: 516 MMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDR 575
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A + +++ G P A YN + C + +A MV G PN +TY +
Sbjct: 576 IEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYII 635
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCL 147
L+ + +L + G L
Sbjct: 636 LIEGLAHEGLLKEAQDLLSVLCSRGVL 662
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 93/228 (40%), Gaps = 33/228 (14%)
Query: 29 AYKIVEKMRDEDI-SPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAI 87
A ++VE+ D +PDV T +I L G+ A VL+ + G D AYN +
Sbjct: 59 AVRLVERSGSCDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLV 118
Query: 88 RNYC------IAKRL--------------------------RDASGLMDEMVEKGLSPNA 115
YC A+RL DA L+D+M+ +G PN
Sbjct: 119 AGYCRYGHLDAARRLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNV 178
Query: 116 TTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWND 175
TY + ++ + + M GC PN + ++ R+ +V+ A +L N
Sbjct: 179 VTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNR 238
Query: 176 MVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ GF + L LC + + E+ F EM+EK P++V+F
Sbjct: 239 LPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTF 286
>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 665
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 123/236 (52%), Gaps = 1/236 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD+++Y LI+ CK+ V +A K++++MRD+ PDV++Y +I G+ G+ D+A
Sbjct: 245 PDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRF 304
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L M YGC P+ +N +R+ C R DA + EM+ KG SP+ T+N+
Sbjct: 305 LNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCR 364
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ + ++ +M GC PN+ S L+ + +K+E A++ + MV +G I+
Sbjct: 365 KGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVT 424
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNL 242
+ L LC GK+ A + ++ KG P +++ I L ++ +A++ L
Sbjct: 425 YNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLL 480
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 110/224 (49%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G KPD+V+YN LI+ CK+ ++++A + + M P+VI++ I+ + G+
Sbjct: 273 MRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGR 332
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A L EM GC P +N I C + A ++++M + G +PN+ +YN
Sbjct: 333 WMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNP 392
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ + M+ GC P+ + L LCK KV++A+++ N + K
Sbjct: 393 LLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCK-DGKVDVAVEILNQLGSK 451
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G ++ + + D L +GK +A K EM KG KP +++
Sbjct: 452 GCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITY 495
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 109/224 (48%), Gaps = 5/224 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+ + G PD+++YN LI YCK ++ A +++++M +SPDV++Y +I+ L G+
Sbjct: 171 LEDSGAVPDVITYNVLISGYCKTGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGK 227
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A +VL + CYPD Y I C + A L+DEM +KG P+ TYN+
Sbjct: 228 LKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNV 287
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
L + M GC PN + +++ +C ++ A + +M+ K
Sbjct: 288 LINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMD-AEKFLAEMIRK 346
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G ++ ++L + LC G + A +M + G P+ +S+
Sbjct: 347 GCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSY 390
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 104/216 (48%), Gaps = 3/216 (1%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PDI++ LI CK + KA +++E + D PDVI+Y +I G G+ A +
Sbjct: 143 PDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITYNVLISGYCKTGEIGSALQL 202
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L M PD YN +R C + +L++A ++D +++ P+ TY +
Sbjct: 203 LDRMS---VSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCK 259
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ + + L M GC P+ + L+ ++ +++ A++ N M G ++
Sbjct: 260 ESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVIT 319
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+++ +C G+ ++AEK EMI KG PS V+F
Sbjct: 320 HNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTF 355
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 90/180 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PDIV+YN L+ CKD +V+ A +I+ ++ + SP +I+Y ++I GL VG+
Sbjct: 413 MVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGK 472
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A +L EMK G PD Y+ + ++ +A ++ E G+ PNA TYN
Sbjct: 473 TDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNS 532
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + M+ GC P S M L++ + + AL+L N++ +G
Sbjct: 533 IMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSRG 592
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 103/205 (50%), Gaps = 3/205 (1%)
Query: 22 KDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAA 81
++ ++E+ +K +E M PD+I+ TS+I GL G+ KA V++ +++ G PD
Sbjct: 122 RNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVI 181
Query: 82 AYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRM 141
YN I YC + A L+D M +SP+ TYN R S L+ + + R
Sbjct: 182 TYNVLISGYCKTGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQ 238
Query: 142 MGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKL 201
M C P+ + L++ ++ V A++L ++M +KG ++ +VL + +C G+L
Sbjct: 239 MQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRL 298
Query: 202 VEAEKSFLEMIEKGHKPSQVSFRRI 226
EA + M G +P+ ++ I
Sbjct: 299 DEAIRFLNHMPSYGCQPNVITHNII 323
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 112/244 (45%), Gaps = 1/244 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P +V++N LI+ C+ + +A ++EKM +P+ +SY ++ L +
Sbjct: 343 MIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKK 402
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A + L M GCYPD YN + C ++ A +++++ KG SP TYN
Sbjct: 403 MERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNT 462
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L M G G P+ + LV R+ KV+ A+ ++D+ E G
Sbjct: 463 VIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMG 522
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEAL 239
+ + + LC + V A M+ +G KP++ S+ I+ L +EAL
Sbjct: 523 VKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEAL 582
Query: 240 QNLS 243
+ L+
Sbjct: 583 ELLN 586
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 81/155 (52%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G P +++YN +ID K + + A K++++M+ + + PD+I+Y++++GGL G+ D+A
Sbjct: 452 GCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEA 511
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+++E G P+A YN+ + C A++ A + MV +G P T+Y +
Sbjct: 512 IAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEG 571
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKL 159
+ + + L + G + + + +VK+
Sbjct: 572 LAYEGLAKEALELLNELCSRGVVKKSSAEQVVVKI 606
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 64/131 (48%), Gaps = 4/131 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G+KPDI++Y+ L+ ++ +V++A + + + P+ I+Y SI+ GL Q
Sbjct: 483 MKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQ 542
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGL----SPNAT 116
+A D L M GC P +Y I ++A L++E+ +G+ S
Sbjct: 543 TVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSRGVVKKSSAEQV 602
Query: 117 TYNLFFRVFYW 127
+ F VFY+
Sbjct: 603 VVKIPFNVFYF 613
>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 109/217 (50%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
KP++V+YN +ID CKDR V +A + + +M D I PDV++Y +I+ G +GQ ++A
Sbjct: 233 KPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATR 292
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
+ KEM PD +N + C + +A + + M EKG PNA TYN +
Sbjct: 293 LFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYC 352
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
N + + + M+G GC PN S L+ + +++ A +L ++M EK +
Sbjct: 353 LHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTV 412
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
L LC +G+ EA F EM G P +++
Sbjct: 413 TYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAY 449
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 129/251 (51%), Gaps = 2/251 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ PD+V+YN ++ +C Q+ +A ++ ++M ++ PD +++ ++ GL G
Sbjct: 262 MVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGM 321
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR V + M E G P+A YNA + YC+ ++ +A ++ M+ KG +PN ++YN+
Sbjct: 322 VSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNI 381
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+ S + + L M P+T + L++ LC+ E AL L+ +M
Sbjct: 382 LINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPRE-ALNLFKEMCSS 440
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
G ++ +L D C G L EA K EM E+ KP+ + + + M +A K E
Sbjct: 441 GLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVA 500
Query: 240 QNLSNKMALFG 250
+ L +K++ G
Sbjct: 501 KELFSKLSADG 511
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 121/236 (51%), Gaps = 1/236 (0%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
V PD V++N L+D CK+ V +A + E M ++ P+ +Y +++ G L Q D+A
Sbjct: 302 VMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAI 361
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
VL M GC P+ ++YN I YC +KR+ +A L+ EM EK L+P+ TY+ +
Sbjct: 362 KVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGL 421
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
R + NL+ M +G LP+ + L+ + ++ AL+L +M E+ I
Sbjct: 422 CQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNI 481
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEALQ 240
++ +L + GKL A++ F ++ G +P ++ IK L++ EA +
Sbjct: 482 ILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYE 537
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 99/177 (55%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G P++ SYN LI+ YCK +++ +A +++ +M +++++PD ++Y++++ GL VG+P +A
Sbjct: 371 GCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREA 430
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++ KEM G PD AY+ + +C L +A L+ EM E+ + PN Y + R
Sbjct: 431 LNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRG 490
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
+ + L + L+ ++ G P+ + ++K ++ + A + + M + GF
Sbjct: 491 MFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGF 547
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 109/223 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++G++PD +++N LI+ C + ++++A + +M P+VISY ++I GL G
Sbjct: 157 MFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGN 216
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A V ++M++ P+ YN I + C + + +A + EMV++G+ P+ TYN
Sbjct: 217 TIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNT 276
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F L + L+ M+G +P+T + LV ++ V A + M EKG
Sbjct: 277 ILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKG 336
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ L D C ++ EA K MI KG P+ S+
Sbjct: 337 AEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSY 379
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 110/241 (45%), Gaps = 1/241 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G +P+ +YN L+D YC Q+++A K++ M + +P++ SY +I G +
Sbjct: 332 MTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKR 391
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A+ +L EM E PD Y+ ++ C R R+A L EM GL P+ Y++
Sbjct: 392 MNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSI 451
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F L + L M PN L++ K+E+A +L++ + G
Sbjct: 452 LLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADG 511
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
I +V+ L G EA + F +M + G P S+ I+ ++ + A+
Sbjct: 512 IRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAI 571
Query: 240 Q 240
Q
Sbjct: 572 Q 572
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 101/223 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M M +P +V + + K +Q A + +M ++ +V S +I L +
Sbjct: 87 MVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLINCLCRLSH 146
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A V+ +M + G PDA +N I C ++++A GL +EMV G PN +YN
Sbjct: 147 VDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNT 206
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + ++ +M PN + ++ + V A++ ++MV++G
Sbjct: 207 VINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRG 266
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + + C +G+L EA + F EM+ + P V+F
Sbjct: 267 IPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTF 309
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 77/139 (55%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ PD+++Y+ L+D +CK +++A K++++M + I P++I YT +I G+ + G+ + A
Sbjct: 441 GLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVA 500
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+++ ++ G PD YN I+ +A +M + G P++ +YN+ +
Sbjct: 501 KELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQG 560
Query: 125 FYWSNDLRSSWNLYCRMMG 143
F + D ++ L M+G
Sbjct: 561 FLQNQDSSTAIQLIDEMVG 579
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 89/205 (43%), Gaps = 2/205 (0%)
Query: 23 DRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAA 82
D ++ A +M + P V+ + +G + Q A + +M +G + +
Sbjct: 74 DISIDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYS 133
Query: 83 YNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMM 142
N I C + A +M +M + G+ P+A T+N ++ + L+ M+
Sbjct: 134 LNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMV 193
Query: 143 GTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKL 201
+G PN S ++ LCK + +A++++ M + ++ + + D LC +
Sbjct: 194 WSGHEPNVISYNTVINGLCKNGNTI-MAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLV 252
Query: 202 VEAEKSFLEMIEKGHKPSQVSFRRI 226
EA + EM+++G P V++ I
Sbjct: 253 NEAVEFLSEMVDRGIPPDVVTYNTI 277
>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 580
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 121/224 (54%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G++PD+V++N LID CK+ +V +A K++ M + I PD+++Y S+I G +VG
Sbjct: 251 MLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGD 310
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ AR++ M GC PD +YN I Y ++ +A L +EM+ G PN TY+
Sbjct: 311 LNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDS 370
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ + + + + L+ M G N+ + +FL LCK E A++L+ ++
Sbjct: 371 LLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFE-AMKLFTELKSS 429
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
F I + L D LC GKL A + F ++ +GH+P+ V++
Sbjct: 430 NFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTY 473
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 117/267 (43%), Gaps = 53/267 (19%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDIS-------PDVISYTSIIG 53
M+++G PD+V+Y LI C + A K+ ++M + DIS P+VI+Y I+
Sbjct: 165 MQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLN-DISRYEINCKPNVITYNIIVD 223
Query: 54 GLGLVGQPDKARDVLKEMK----------EYGCYPDAAAYNAAIRNYCIAKRLRDASGLM 103
GL VG+ D+A+ + +EMK + G PD +N I C ++ +A L+
Sbjct: 224 GLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLL 283
Query: 104 DEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQ 163
M+E G+ P+ TYN F DL S+ L+ M GC P+ S L+ +
Sbjct: 284 GVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKT 343
Query: 164 EKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
KVE A++L+N EM+ G +P+ +++
Sbjct: 344 LKVEEAMKLYN-----------------------------------EMLLVGKRPNVITY 368
Query: 224 RRIKALMELANKQEALQNLSNKMALFG 250
+ + LA K + + L + M G
Sbjct: 369 DSLLKGIFLAGKVDDAKKLFSVMKAHG 395
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 104/219 (47%), Gaps = 10/219 (4%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMR----------DEDISPDVISYTSII 52
E+ KP++++YN ++D CK + ++A ++ E+M+ D+ + PD++++ +I
Sbjct: 208 EINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLI 267
Query: 53 GGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLS 112
L G+ +A+ +L M E G PD YN+ I +C+ L A L M KG
Sbjct: 268 DTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCE 327
Query: 113 PNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQL 172
P+ +YN+ + + + + LY M+ G PN + L+K KV+ A +L
Sbjct: 328 PDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKL 387
Query: 173 WNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEM 211
++ M G + D LC L EA K F E+
Sbjct: 388 FSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTEL 426
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 70/117 (59%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
++ K +I + NCLID CK ++E A+++ EK+ +E P+V++YT +I G GQ
Sbjct: 426 LKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQ 485
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
DKA ++++M+ GC PD YN +R + + +L + L+ M +K +SP+A T
Sbjct: 486 VDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAIT 542
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 114/247 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+ PD+V+YN LI+ +C + A ++ M + PDVISY +I G +
Sbjct: 286 MIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLK 345
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A + EM G P+ Y++ ++ +A ++ DA L M G++ N+ TY +
Sbjct: 346 VEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGI 405
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F ++ L + L+ + + ++ L+ + K+E A +L+ + +G
Sbjct: 406 FLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEG 465
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
++ ++ C G++ +A +M G P +++ + +NK E +
Sbjct: 466 HEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVV 525
Query: 241 NLSNKMA 247
L ++MA
Sbjct: 526 QLLHRMA 532
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 114/273 (41%), Gaps = 20/273 (7%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G+ D + N L++ C ++ + + + SP++++Y ++I GL + +
Sbjct: 95 MRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHR 154
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMV------EKGLSPN 114
+A + M++ GC PD Y I+ C + A L EM+ E PN
Sbjct: 155 ISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPN 214
Query: 115 ATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPN-----------TQSCMFLVKLCKRQ 163
TYN+ + L+ M G +PN + + LCK
Sbjct: 215 VITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEG 274
Query: 164 EKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ +E A +L M+E G ++ + L + C +G L A + F+ M KG +P +S+
Sbjct: 275 KVIE-AKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISY 333
Query: 224 RRIKALMELANKQEALQNLSNKMALFG--PSMI 254
+ K E L N+M L G P++I
Sbjct: 334 NVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVI 366
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 97/230 (42%), Gaps = 35/230 (15%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G +PD++SYN LI+ Y K +VE+A K+ +M P+VI+Y S++ G+ L G+
Sbjct: 321 MPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGK 380
Query: 61 PDKARDVLKEMKEYGCYPDAAAY-----------------------------------NA 85
D A+ + MK +G ++ Y N
Sbjct: 381 VDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNC 440
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
I C A +L A L +++ +G PN TY + F + + L +M G
Sbjct: 441 LIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANG 500
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLL 195
C P+ + L++ K+E +QL + M +K + ++ D+L
Sbjct: 501 CTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDML 550
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 105/236 (44%), Gaps = 18/236 (7%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P + S+N L+ K + + + + +MR +S D + ++ L V + +
Sbjct: 67 PSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAA 126
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
+ G P+ YN I+ C+ R+ +A+ L M + G +P+ TY +
Sbjct: 127 FAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCG 186
Query: 128 SNDLRSSWNLYCRMMG------TGCLPNTQSCMFLVK-LCKRQEKVEIALQLW------- 173
+ ++ + L+ M+ C PN + +V LCK + E A QL+
Sbjct: 187 TGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDE-AKQLFEEMKTQG 245
Query: 174 ---NDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
N+M+++G ++ +VL D LC GK++EA+K MIE G P V++ +
Sbjct: 246 MIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSL 301
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 90/210 (42%), Gaps = 8/210 (3%)
Query: 20 YCKDRQVE--KAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCY 77
+CK V A M +P + S+ ++ GL + + + +M+ G
Sbjct: 42 HCKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLS 101
Query: 78 PDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNL 137
D N + C RLR+ ++ +G SPN TYN + + + + L
Sbjct: 102 SDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRL 161
Query: 138 YCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV------EKGFGSYILVSDVL 191
+ RM GC P+ + L+K + IAL+L +M+ E ++ +++
Sbjct: 162 FLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNII 221
Query: 192 FDLLCDMGKLVEAEKSFLEMIEKGHKPSQV 221
D LC +G+ EA++ F EM +G P+++
Sbjct: 222 VDGLCKVGREDEAKQLFEEMKTQGMIPNEM 251
>gi|9755668|emb|CAC01820.1| putative protein [Arabidopsis thaliana]
Length = 532
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 132/260 (50%), Gaps = 6/260 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +GVK D+VSY+ +I Y K + K K+ ++M+ E I PD Y +++ L
Sbjct: 253 MGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASF 312
Query: 61 PDKARDVLKEM-KEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+AR+++K M +E G P+ YN+ I+ C A++ +A + DEM+EKGL P TY+
Sbjct: 313 VSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYH 372
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
F R+ ++ + L +M GC P ++ + L++ R + L LW++M EK
Sbjct: 373 AFMRILRTGEEV---FELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEK 429
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
G + V+ L GK+ EA + EM +KG +P++ I++ + KQ A
Sbjct: 430 TVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPNENVEDMIQSW--FSGKQYAE 487
Query: 240 QNLSNKMALFGPSMIPKREE 259
Q +++ I K+ E
Sbjct: 488 QRITDSKGEVNKGAIVKKSE 507
>gi|302760727|ref|XP_002963786.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
gi|300169054|gb|EFJ35657.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
Length = 432
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 135/269 (50%), Gaps = 17/269 (6%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G +P+ +YN L+D CK +++ A ++ + R D +PDV++Y +++ L +G+ D+A
Sbjct: 127 GCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEA 186
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+M E G P ++NA I C A+RL DA + +EM+++ PN TY++
Sbjct: 187 LATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDG 246
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
S+ L + L RM+ GC P+ + LV +++ AL L MV +G
Sbjct: 247 LCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPD 306
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI--------------KALM 230
++ V+ D LC +G++ +A + F E++ P+ V++ + K +
Sbjct: 307 VVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMR 366
Query: 231 ELANKQEALQNLSNKMALFGPSMIPKREE 259
E+A + + N M ++G SM+ + EE
Sbjct: 367 EMACRPNVVT--YNTM-IWGLSMVDRNEE 392
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 122/277 (44%), Gaps = 37/277 (13%)
Query: 11 VSYNCLIDVYCKDRQVEKAYKIVEKMRDEDIS---------------------------- 42
V+YN LI +C ++ A+ ++ +M E +
Sbjct: 26 VTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDA 85
Query: 43 --------PDVISYTSIIGGLGLVGQPDKARDVLKEM-KEYGCYPDAAAYNAAIRNYCIA 93
PDV+SYT++I GL +G+ D A D+ ++M GC P+A YNA + C
Sbjct: 86 SLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQ 145
Query: 94 KRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSC 153
RL A ++ E ++ +P+ TYN + + + + +M G +P S
Sbjct: 146 DRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSF 205
Query: 154 MFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIE 213
++ R ++ AL+++N+M+++ F ++ V+ D LC +L EA++ M+
Sbjct: 206 NAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVS 265
Query: 214 KGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFG 250
+G +P V++ + A + ++ L +M G
Sbjct: 266 EGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQG 302
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 111/235 (47%), Gaps = 3/235 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G P +VS+N +I C+ R++ A ++ +M D D P++++Y+ +I GL Q
Sbjct: 193 MTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQ 252
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A+ +L M GC PD AY + + A RL A GL+ MV +G P+ TY +
Sbjct: 253 LDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTV 312
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + ++ ++ C PN + L+ R +V+ ++ +M +
Sbjct: 313 VIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREMACR- 371
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANK 235
++ + + L + + EA F EM E G P ++R +K + + ++
Sbjct: 372 --PNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGLKRALRMIDQ 424
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 121/260 (46%), Gaps = 7/260 (2%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
R+ PD+V+YN L+ + +V++A +M +E P ++S+ +II GL +
Sbjct: 159 RKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRL 218
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
A +V EM + +P+ Y+ I C + +L +A L+D MV +G P+ Y
Sbjct: 219 ADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPL 278
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEKG 180
F + L S+ L RM+ GC+P+ + ++ KLCK +V+ A +++ ++V
Sbjct: 279 VLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCK-VGRVDDAHEIFRELVANK 337
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
++ L C ++ E K EM +P+ V++ + + + ++ E
Sbjct: 338 CSPNVVTYSALIGGYCRASRVDEGGKVMREM---ACRPNVVTYNTMIWGLSMVDRNEEAY 394
Query: 241 NLSNKMALFGPSMIPKREEY 260
+ +M+ G +P Y
Sbjct: 395 GMFREMSECG--FVPDARTY 412
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 1 MREMGVKPDIVSYNCLI-DVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVG 59
MREM +P++V+YN +I + DR E+AY + +M + PD +Y + L ++
Sbjct: 365 MREMACRPNVVTYNTMIWGLSMVDRN-EEAYGMFREMSECGFVPDARTYRGLKRALRMID 423
Query: 60 QP 61
QP
Sbjct: 424 QP 425
>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
Length = 608
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 114/224 (50%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++G+ P ++N LI+ C + ++++A ++ +M P+VISY +II GL G
Sbjct: 149 MFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGN 208
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A DV K+M++ GC PD YN I + C + + DA + EM+++G+ PN TYN
Sbjct: 209 TSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNC 268
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
F L + L+ M+G +P+T + LV LCK + V A ++ M EK
Sbjct: 269 MVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCK-EGMVSEARLVFETMTEK 327
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G I + L D C + EA+K F MI +G P S+
Sbjct: 328 GVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSY 371
Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 128/261 (49%), Gaps = 4/261 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ P++ +YNC++ +C Q+ +A ++ ++M D+ PD ++ T ++ GL G
Sbjct: 254 MLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGM 313
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR V + M E G P+ + YNA + YC+ + + +A + + M+ +G +P +YN+
Sbjct: 314 VSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNI 373
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
F S + + +L M P+T + L++ LC+ E AL ++ +M
Sbjct: 374 LINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKE-ALNIFKEMCSY 432
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
G ++ +L D C G L EA K M EK +P+ V + M +A K E
Sbjct: 433 GLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVA 492
Query: 240 QNLSNKMALFGPSMIPKREEY 260
+ L +K LF + P Y
Sbjct: 493 KELFSK--LFADGIRPTIRTY 511
Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 104/223 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G KPD+V+YN +ID CKDR V A + + +M D I P+V +Y ++ G ++GQ
Sbjct: 219 MEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQ 278
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A + KEM PD + C + +A + + M EKG+ PN +TYN
Sbjct: 279 LNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNA 338
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + ++ M+ GC P S L+ + +++ A L +M K
Sbjct: 339 LMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKA 398
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ L LC G+ EA F EM G P+ V++
Sbjct: 399 LNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTY 441
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 94/181 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P + SYN LI+ +CK R++++A ++ +M + ++PD ++Y++++ GL G+
Sbjct: 359 MIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGR 418
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
P +A ++ KEM YG P+ Y+ + +C L +A L+ M EK L PN + +
Sbjct: 419 PKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTI 478
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + L + L+ ++ G P ++ ++K ++ + A L+ M + G
Sbjct: 479 LIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDG 538
Query: 181 F 181
F
Sbjct: 539 F 539
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 101/223 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E GV+P+I +YN L+D YC R + +A K+ E M + +P V SY +I G +
Sbjct: 324 MTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRR 383
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A+ +L EM PD Y+ ++ C R ++A + EM GL PN TY++
Sbjct: 384 MDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSI 443
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F L + L M PN L++ K+E+A +L++ + G
Sbjct: 444 LLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADG 503
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I V+ L G EA F +M + G P+ S+
Sbjct: 504 IRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSY 546
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 103/223 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M M +P + + + + K +Q + +M ++ +V S +I L +
Sbjct: 79 MVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLINCLCRLNH 138
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A +L +M + G +P A+ +NA I C ++++A L +EMV +G PN +YN
Sbjct: 139 VDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNT 198
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + +++ +M GC P+ + ++ + V A++ ++M+++G
Sbjct: 199 IINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRG 258
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + + C +G+L EA + F EM+ + P V+
Sbjct: 259 IPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTL 301
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 94/194 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + PD V+Y+ L+ C+ + ++A I ++M + P++++Y+ ++ G G
Sbjct: 394 MYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGH 453
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A +LK M+E P+ + I IA +L A L ++ G+ P TY +
Sbjct: 454 LDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTV 513
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ +++L+ +M G LPN+ S +++ + + A++L ++MV K
Sbjct: 514 MIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKR 573
Query: 181 FGSYILVSDVLFDL 194
F + + +L DL
Sbjct: 574 FSANLSTFQMLLDL 587
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 85/162 (52%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ P++V+Y+ L+D +CK +++A K+++ M+++ + P+++ +T +I G+ + G+ + A
Sbjct: 433 GLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVA 492
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+++ ++ G P Y I+ +A L +M + G PN+ +YN+ +
Sbjct: 493 KELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQG 552
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKV 166
F + D ++ L M+G N + L+ L + E +
Sbjct: 553 FLQNQDSSTAIRLIDEMVGKRFSANLSTFQMLLDLESQDEII 594
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/149 (20%), Positives = 66/149 (44%)
Query: 78 PDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNL 137
P A + + ++ K+ L ++M G++ N + N+ N + + ++
Sbjct: 86 PSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLINCLCRLNHVDFAVSI 145
Query: 138 YCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCD 197
+M G P + L+ + K++ A++L+N+MV +G ++ + + + LC
Sbjct: 146 LGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCK 205
Query: 198 MGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G A F +M + G KP V++ I
Sbjct: 206 TGNTSMAVDVFKKMEQNGCKPDVVTYNTI 234
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 54/129 (41%)
Query: 98 DASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV 157
DA MV P+ + F F + +L +M G N S L+
Sbjct: 71 DALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLI 130
Query: 158 KLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHK 217
R V+ A+ + M + G + L + LC+ GK+ EA + F EM+ +GH+
Sbjct: 131 NCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHE 190
Query: 218 PSQVSFRRI 226
P+ +S+ I
Sbjct: 191 PNVISYNTI 199
>gi|334187687|ref|NP_197005.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635761|sp|Q9LFQ4.2|PP383_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g15010, mitochondrial; Flags: Precursor
gi|332004721|gb|AED92104.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 572
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 132/260 (50%), Gaps = 6/260 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +GVK D+VSY+ +I Y K + K K+ ++M+ E I PD Y +++ L
Sbjct: 293 MGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASF 352
Query: 61 PDKARDVLKEM-KEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+AR+++K M +E G P+ YN+ I+ C A++ +A + DEM+EKGL P TY+
Sbjct: 353 VSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYH 412
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
F R+ ++ + L +M GC P ++ + L++ R + L LW++M EK
Sbjct: 413 AFMRILRTGEEV---FELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEK 469
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
G + V+ L GK+ EA + EM +KG +P++ I++ + KQ A
Sbjct: 470 TVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPNENVEDMIQSW--FSGKQYAE 527
Query: 240 QNLSNKMALFGPSMIPKREE 259
Q +++ I K+ E
Sbjct: 528 QRITDSKGEVNKGAIVKKSE 547
>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 138/295 (46%), Gaps = 37/295 (12%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++G++P V++ L++ C ++ A K+ +++ +P +I+YT+II GL +G
Sbjct: 132 MFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGH 191
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +LK+M+E GC PD AYN I + C +R +A EMV++G+ PN TY+
Sbjct: 192 TTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSS 251
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKR----------------- 162
F L + +L+ +M+G +PNT + LV LCK
Sbjct: 252 ILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENG 311
Query: 163 -----------------QEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
Q +++ A +L++ MV KGF + V ++L + C +L EA+
Sbjct: 312 VEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAK 371
Query: 206 KSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFGPSMIPKREEY 260
EM ++ P V++ + A + + Q L +M +G ++P Y
Sbjct: 372 TLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYG--LLPDSITY 424
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 119/235 (50%), Gaps = 3/235 (1%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
V P+ V++ L+D CK+ + +A ++ E M + + PD +Y++++ G L Q D+A+
Sbjct: 277 VMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQ 336
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+ M G P YN I +C ++RL +A L+ EM ++ L+P+ TY+ + F
Sbjct: 337 KLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGF 396
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + + L+ M G LP++ + + L LCK E A +L M E +
Sbjct: 397 CQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDE-AFRLLKAMQESKIEPH 455
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEA 238
I + ++L +C+ GKL A + F + KG +PS V++ I L++ EA
Sbjct: 456 ICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEA 510
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 107/235 (45%), Gaps = 3/235 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G P + YN LI+ +CK R++ +A ++ +M D D++PD ++Y++++ G G+P A
Sbjct: 346 GFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVA 405
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ + KEM YG PD+ Y+ + C L +A L+ M E + P+ YN+ +
Sbjct: 406 QKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQG 465
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
L ++ L+ + G P+ + ++ ++ A +++ MV G
Sbjct: 466 MCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPN 525
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
+V G A + EM+ +G +F + L++L + E +
Sbjct: 526 SCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTF---QMLLDLESNDEII 577
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 102/225 (45%), Gaps = 6/225 (2%)
Query: 4 MGVKP--DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
+G++P +V +N L+ K + + ++M +I P+V + T +I L +
Sbjct: 61 LGIRPLPPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCHSNRD 120
Query: 62 DK--ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
A L +M + G P + + C ++ DA L DE+ + G +P+ TY
Sbjct: 121 HVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYT 180
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVE 178
+ ++ L +M GC P+ + ++ LCK + E A+ +++MV+
Sbjct: 181 TIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANE-AMYFFSEMVD 239
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+G ++ + C++G+L EA F +MI + P+ V+F
Sbjct: 240 QGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTF 284
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 78/163 (47%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ PD ++Y+ L+D CK +++A+++++ M++ I P + Y +I G+ G+ + A
Sbjct: 416 GLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAA 475
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
R++ + G P Y I +A + +MV G PN+ TYN+ +
Sbjct: 476 RELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQG 535
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVE 167
F + D ++ L M+G G ++ + L+ L E +
Sbjct: 536 FLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLLDLESNDEIIS 578
>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 566
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 128/252 (50%), Gaps = 14/252 (5%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E GV P++ +YNC+++ CKD + + A+++ ++MR+ +S ++++Y ++IGGL +
Sbjct: 259 MQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMK 318
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A V+ +MK G P+ YN I +C +L A L ++ +GLSP+ TYN+
Sbjct: 319 LNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNI 378
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F D + + M G P+ + L+ R + +E A+QL M E G
Sbjct: 379 LVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELG 438
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQV--------------SFRRI 226
+ VL C G++ EA + F M+EK +P++V S+R +
Sbjct: 439 LVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRAL 498
Query: 227 KALMELANKQEA 238
K L E+ K+ A
Sbjct: 499 KLLKEMEEKELA 510
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 125/247 (50%), Gaps = 2/247 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MRE GV +IV+YN LI C++ ++ +A K+V++M+ + I+P++I+Y ++I G VG+
Sbjct: 294 MRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGK 353
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA + +++K G P YN + +C A+ ++ EM E+G+ P+ TY +
Sbjct: 354 LGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTI 413
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
F S+++ + L M G +P+ + L+ C + + E A +L+ MVEK
Sbjct: 414 LIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNE-ASRLFKSMVEK 472
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
++ + + C G A K EM EK P+ S+R + ++ K +
Sbjct: 473 NCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEA 532
Query: 240 QNLSNKM 246
+ L KM
Sbjct: 533 ERLVEKM 539
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 112/241 (46%), Gaps = 1/241 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+ E G P++V Y LID CK ++EKA + +M + + +YT +I GL G
Sbjct: 189 LTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGV 248
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ ++ ++M+E G +P+ YN + C R +DA + DEM E+G+S N TYN
Sbjct: 249 KKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNT 308
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
L + + +M G PN + L+ K+ AL L D+ +G
Sbjct: 309 LIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRG 368
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEAL 239
++ ++L C G A K EM E+G KPS+V++ I N ++A+
Sbjct: 369 LSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAI 428
Query: 240 Q 240
Q
Sbjct: 429 Q 429
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 81/166 (48%), Gaps = 1/166 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+KP V+Y LID + + +EKA ++ M + + PDV +Y+ +I G + GQ
Sbjct: 399 MEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQ 458
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A + K M E C P+ YN I YC A L+ EM EK L+PN +Y
Sbjct: 459 MNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRY 518
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKV 166
V + + L +M+ +G P+T S + L+ K V
Sbjct: 519 MIEVLCKERKSKEAERLVEKMIDSGIDPST-SILSLISRAKNDSHV 563
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 89/185 (48%), Gaps = 4/185 (2%)
Query: 44 DVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLM 103
DV S+ +I G G+ +K+ D+L E+ E+G P+ Y I C + A L
Sbjct: 162 DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221
Query: 104 DEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPN--TQSCMFLVKLCK 161
EM + GL N TY + + + + + +Y +M G PN T +C+ + +LCK
Sbjct: 222 FEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCV-MNQLCK 280
Query: 162 RQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQV 221
+ + A Q++++M E+G I+ + L LC KL EA K +M G P+ +
Sbjct: 281 -DGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLI 339
Query: 222 SFRRI 226
++ +
Sbjct: 340 TYNTL 344
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 57/133 (42%), Gaps = 1/133 (0%)
Query: 83 YNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMM 142
Y I +Y ++ L + +EMV+ G P + +N S+ W+ +
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK 156
Query: 143 GTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLV 202
L + S L+K C ++E + L ++ E GF +++ L D C G++
Sbjct: 157 SKVVL-DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215
Query: 203 EAEKSFLEMIEKG 215
+A+ F EM + G
Sbjct: 216 KAKDLFFEMGKLG 228
>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 113/223 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+K + +YN +ID CK+ +E A + +M++ +PD+++Y S+I G G +G
Sbjct: 47 MGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGL 106
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+ + ++MK+ C PD YNA I +C +R+ A + EM GL PN TY+
Sbjct: 107 LDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYST 166
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F F L+ + + M PN + L+ + + AL+L ++++ G
Sbjct: 167 FIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAG 226
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ L D LC+ G++ EAE+ F M+ G P+Q ++
Sbjct: 227 IKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETY 269
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 117/249 (46%), Gaps = 1/249 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ PD+++YN LI+ +CK ++ KA++ + +M+ + P+V++Y++ I G
Sbjct: 117 MKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGM 176
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A +M+ P+ Y + I C A L +A L++E+++ G+ N TY
Sbjct: 177 LQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTA 236
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++ + ++ M+ G PN ++ LV + +++E A + +M EK
Sbjct: 237 LLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKC 296
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI-KALMELANKQEAL 239
+L+ + LC+ +L EA+ E+ E G + V + + A + EAL
Sbjct: 297 IKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEAL 356
Query: 240 QNLSNKMAL 248
L + L
Sbjct: 357 TLLEEMLDL 365
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 124/272 (45%), Gaps = 25/272 (9%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
+ G+K ++V+Y L+D C++ ++++A ++ M + ++P+ +YT+++ G + +
Sbjct: 224 QAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEME 283
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
A+D+LKEMKE PD Y + C RL +A L+ E+ E G++ NA Y
Sbjct: 284 YAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLM 343
Query: 123 RVFYWS-----------------------NDLRSSWNLYCRMMGTGCLPNTQSCMFLVKL 159
++ S N + L+ M+ G +P+ + L+
Sbjct: 344 DAYFKSGQATEALTLLEEMLDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDG 403
Query: 160 CKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
+ ++ AL L + M+E G + L L G++ +A EMI KG P
Sbjct: 404 NMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPD 463
Query: 220 QVSFR-RIKALMELANKQEALQNLSNKMALFG 250
+V + IK L EAL+ L N+MA G
Sbjct: 464 EVVYMCLIKKYYALGKVDEALE-LQNEMAKRG 494
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 94/203 (46%), Gaps = 23/203 (11%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E +KPD++ Y ++ C + ++E+A ++ ++++ I+ + + YT+++ GQ
Sbjct: 292 MKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQ 351
Query: 61 PDKARDVLKEMKEY-----------------------GCYPDAAAYNAAIRNYCIAKRLR 97
+A +L+EM + G PD AY A I L+
Sbjct: 352 ATEALTLLEEMLDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQ 411
Query: 98 DASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV 157
+A L D M+E G+ + Y S ++ + NL M+G G LP+ M L+
Sbjct: 412 EALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLI 471
Query: 158 KLCKRQEKVEIALQLWNDMVEKG 180
K KV+ AL+L N+M ++G
Sbjct: 472 KKYYALGKVDEALELQNEMAKRG 494
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 62/111 (55%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ PD ++Y LID K +++A + ++M + + D+ +YT++I GL GQ
Sbjct: 385 MLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQ 444
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGL 111
KAR++L EM G PD Y I+ Y ++ +A L +EM ++G+
Sbjct: 445 VQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGM 495
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 89/216 (41%), Gaps = 1/216 (0%)
Query: 26 VEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNA 85
+E+A + KMR + P S +++ L VG+ D +R K+M G YN
Sbjct: 2 LEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNI 61
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
I C L A L +M E G +P+ TYN L ++ +M
Sbjct: 62 MIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDAD 121
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
C P+ + L+ + E++ A + ++M G ++ D C G L EA
Sbjct: 122 CDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAI 181
Query: 206 KSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQ 240
K F++M P++ ++ I A + N EAL+
Sbjct: 182 KFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALK 217
>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g01110-like [Cucumis sativus]
Length = 749
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 124/241 (51%), Gaps = 1/241 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+ PD ++ LI YCKD ++KA + E M ++ PD ++Y ++I G G+
Sbjct: 493 MVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGE 552
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A+++ +M PD +Y + +C + L +A L D+M+EKG+ PN T N
Sbjct: 553 MGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNT 612
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + S D+ ++ +M+ G +P++ S L+ ++ +E A L N+M ++G
Sbjct: 613 LIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRG 672
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
I+ +++ + C GK+ EAE+ +MIE G P ++ I + N +EA
Sbjct: 673 LQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAF 732
Query: 240 Q 240
+
Sbjct: 733 R 733
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 116/223 (52%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV DIV+YN LI+ YC++ VE+A++++ + P +++Y +I+ GL +G+
Sbjct: 283 MEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGK 342
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A+DVL EM + G P+AA YN + C + +A + DEM +G+ P+ +++
Sbjct: 343 YDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSS 402
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
V + L + + M +G +P+ L+ R + AL++ ++M+ +G
Sbjct: 403 LIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARG 462
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + + LC +A+ F EM+E+G P +F
Sbjct: 463 CFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTF 505
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 105/223 (47%), Gaps = 2/223 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV PD+VS++ LI V ++ + +A +M I PD + YT +I G G
Sbjct: 388 MSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGA 447
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A + EM GC+ D YN + C K DA L +EMVE+G+ P+ T+
Sbjct: 448 LSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTT 507
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
R + ++ + NL+ M+ T P+ + L+ CK E A +LW+DM+ K
Sbjct: 508 LIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGR-AKELWDDMIRK 566
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
+ + + C G L EA +M+EKG +P+ V+
Sbjct: 567 DIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVT 609
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 97/211 (45%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G++ ++ + N +++ CKDR+ E + M + + D+++Y ++I G ++A
Sbjct: 252 GIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEA 311
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+L G P YNA + C + A ++ EM++ GL+PNA TYN
Sbjct: 312 FQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVE 371
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+++ + ++ M G LP+ S L+ + R + AL + +M G
Sbjct: 372 ICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPD 431
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
++ +L D C G L +A K EM+ +G
Sbjct: 432 NVIYTILIDGFCRNGALSDALKMRDEMLARG 462
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 81/149 (54%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G++P++V+ N LI YC+ + KAY+ + KM I PD SY ++I G
Sbjct: 598 MLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEAN 657
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA ++ EM++ G + YN + +C ++++A ++ +M+E G++P+ TY+
Sbjct: 658 LEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSS 717
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPN 149
++++ ++ + M+ G +P+
Sbjct: 718 LINGHVSQDNMKEAFRFHDEMLQRGLVPD 746
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 35/216 (16%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGL---GL 57
M +KPD V+YN LID +CK ++ +A ++ + M +DI PD ISY +++ G GL
Sbjct: 528 MVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGL 587
Query: 58 V--------------------------------GQPDKARDVLKEMKEYGCYPDAAAYNA 85
+ G KA + L +M G PD+ +YN
Sbjct: 588 LPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNT 647
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
I Y L A L++EM ++GL N TYNL F ++ + + +M+ G
Sbjct: 648 LIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIG 707
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
P+ + L+ Q+ ++ A + ++M+++G
Sbjct: 708 INPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGL 743
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/228 (19%), Positives = 91/228 (39%), Gaps = 37/228 (16%)
Query: 13 YNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMK 72
Y+ L+ Y + +++ + + + +R + +S + + ++GGL G D A ++ E+
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVV 249
Query: 73 EYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLR 132
G + N + C ++ + + +M KG+ + TYN
Sbjct: 250 RGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLI---------- 299
Query: 133 SSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLF 192
N YC R+ VE A QL N +G +L + +
Sbjct: 300 ---NAYC----------------------REGLVEEAFQLLNSFSSRGMEPGLLTYNAIL 334
Query: 193 DLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
LC +GK A+ +EM++ G P+ ++ + L+E+ + L+
Sbjct: 335 YGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTL--LVEICRRDNILE 380
>gi|302786208|ref|XP_002974875.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
gi|300157770|gb|EFJ24395.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
Length = 382
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 134/266 (50%), Gaps = 11/266 (4%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G +P+ +YN L+D CK +++ A ++ + R D +PDV++Y +++ L +G+ D+A
Sbjct: 77 GCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAALFQLGRVDEA 136
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+M E G P ++NA I C A+RL DA + +EM+++ PN TY++
Sbjct: 137 LATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDG 196
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
S+ L + L RM+ GC P+ + LV +++ AL L MV +G
Sbjct: 197 LCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPD 256
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSN 244
++ V+ D LC +G++ +A + F E++ P+ V++ + A++ + +
Sbjct: 257 VVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMR 316
Query: 245 KMA-----------LFGPSMIPKREE 259
+MA ++G SM+ + EE
Sbjct: 317 EMACRPNVVTYNTMIWGLSMVDRNEE 342
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 104/209 (49%), Gaps = 1/209 (0%)
Query: 43 PDVISYTSIIGGLGLVGQPDKARDVLKEM-KEYGCYPDAAAYNAAIRNYCIAKRLRDASG 101
PDV+SYT++I GL +G+ D A D+ ++M GC P+A YNA + C RL A
Sbjct: 44 PDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARA 103
Query: 102 LMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCK 161
++ E ++ +P+ TYN + + + + +M G +P S ++
Sbjct: 104 VIAEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLC 163
Query: 162 RQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQV 221
R ++ AL+++N+M+++ F ++ V+ D LC +L EA++ M+ +G +P V
Sbjct: 164 RARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLV 223
Query: 222 SFRRIKALMELANKQEALQNLSNKMALFG 250
++ + A + ++ L +M G
Sbjct: 224 AYTPLVLGFSAAGRLDSALGLLRRMVSQG 252
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 110/235 (46%), Gaps = 3/235 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G P +VS+N +I C+ R++ A ++ +M D D P++++Y+ +I GL Q
Sbjct: 143 MTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQ 202
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A+ +L M GC PD AY + + A RL A GL+ MV +G P+ TY +
Sbjct: 203 LDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTV 262
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + ++ ++ C PN + L+ R +V+ ++ +M +
Sbjct: 263 VIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREMACR- 321
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANK 235
++ + + L + + EA F EM E G P ++R +K + + +
Sbjct: 322 --PNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGLKRALRMIDH 374
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 121/260 (46%), Gaps = 7/260 (2%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
R+ PD+V+YN L+ + +V++A +M +E P ++S+ +II GL +
Sbjct: 109 RKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRL 168
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
A +V EM + +P+ Y+ I C + +L +A L+D MV +G P+ Y
Sbjct: 169 ADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPL 228
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEKG 180
F + L S+ L RM+ GC+P+ + ++ KLCK +V+ A +++ ++V
Sbjct: 229 VLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCK-VGRVDDAHEIFRELVANK 287
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
++ L C ++ E K EM +P+ V++ + + + ++ E
Sbjct: 288 CSPNVVTYSALIGGYCRASRVDEGGKVMREM---ACRPNVVTYNTMIWGLSMVDRNEEAY 344
Query: 241 NLSNKMALFGPSMIPKREEY 260
+ +M+ G +P Y
Sbjct: 345 GMFREMSECG--FVPDARTY 362
>gi|255552099|ref|XP_002517094.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543729|gb|EEF45257.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 549
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 130/250 (52%), Gaps = 8/250 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G +P++VSY C I++YCK + I +M+++ P+VI+YT + LG Q
Sbjct: 295 MDKQGFQPNVVSYTCFIELYCKLKDFRNVEAIFSEMQEKSCKPNVITYTIFMHALGKAKQ 354
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA +V + MK C PDA+ Y++ I + RL+DA + ++M ++G+SP+ TYN
Sbjct: 355 VNKALEVYEMMKSNCCVPDASFYSSLIFVLTQSGRLKDAWDVFEDMKKQGVSPDLLTYNT 414
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ L RM C P+ Q+ L+K+C R++++++ L N M +
Sbjct: 415 MITSACTHLEEENALKLLRRMEEDSCKPDIQTYAPLLKMCCRKKRIKVLKFLLNHMFKNN 474
Query: 181 ----FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQ 236
G+Y+L L LC GKL A F EM+ KG P +++ + +E N
Sbjct: 475 ISIDLGTYVL----LVGGLCKSGKLELACSFFEEMVMKGLIPRDRTYKMLVEELEQNNLT 530
Query: 237 EALQNLSNKM 246
EA + + M
Sbjct: 531 EAKEKIQKLM 540
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 106/244 (43%), Gaps = 11/244 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+ ++GV+ DI + N L+D K+ VE AY + +D I D S+ ++ G +
Sbjct: 226 IEKLGVRKDIEALNVLMDALVKEGSVEHAYSAFMEFKDS-IHVDFQSFNILLHGYCKARK 284
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D AR ++ EM + G P+ +Y I YC K R+ + EM EK PN TY +
Sbjct: 285 LDDARKIMDEMDKQGFQPNVVSYTCFIELYCKLKDFRNVEAIFSEMQEKSCKPNVITYTI 344
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + + + +Y M C+P+ L+ + + +++ A ++ DM ++G
Sbjct: 345 FMHALGKAKQVNKALEVYEMMKSNCCVPDASFYSSLIFVLTQSGRLKDAWDVFEDMKKQG 404
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF----------RRIKALM 230
+L + + C + A K M E KP ++ +RIK L
Sbjct: 405 VSPDLLTYNTMITSACTHLEEENALKLLRRMEEDSCKPDIQTYAPLLKMCCRKKRIKVLK 464
Query: 231 ELAN 234
L N
Sbjct: 465 FLLN 468
>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Cucumis sativus]
Length = 749
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 124/241 (51%), Gaps = 1/241 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+ PD ++ LI YCKD ++KA + E M ++ PD ++Y ++I G G+
Sbjct: 493 MVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGE 552
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A+++ +M PD +Y + +C + L +A L D+M+EKG+ PN T N
Sbjct: 553 MGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNT 612
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + S D+ ++ +M+ G +P++ S L+ ++ +E A L N+M ++G
Sbjct: 613 LIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRG 672
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
I+ +++ + C GK+ EAE+ +MIE G P ++ I + N +EA
Sbjct: 673 LQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAF 732
Query: 240 Q 240
+
Sbjct: 733 R 733
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 116/223 (52%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV DIV+YN LI+ YC++ VE+A++++ + P +++Y +I+ GL +G+
Sbjct: 283 MEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGK 342
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A+DVL EM + G P+AA YN + C + +A + DEM +G+ P+ +++
Sbjct: 343 YDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSS 402
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
V + L + + M +G +P+ L+ R + AL++ ++M+ +G
Sbjct: 403 LIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARG 462
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + + LC +A+ F EM+E+G P +F
Sbjct: 463 CFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTF 505
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 105/223 (47%), Gaps = 2/223 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV PD+VS++ LI V ++ + +A +M I PD + YT +I G G
Sbjct: 388 MSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGA 447
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A + EM GC+ D YN + C K DA L +EMVE+G+ P+ T+
Sbjct: 448 LSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTT 507
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
R + ++ + NL+ M+ T P+ + L+ CK E A +LW+DM+ K
Sbjct: 508 LIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGR-AKELWDDMIRK 566
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
+ + + C G L EA +M+EKG +P+ V+
Sbjct: 567 DIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVT 609
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 97/211 (45%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G++ ++ + N +++ CKDR+ E + M + + D+++Y ++I G ++A
Sbjct: 252 GIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEA 311
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+L G P YNA + C + A ++ EM++ GL+PNA TYN
Sbjct: 312 FQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVE 371
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+++ + ++ M G LP+ S L+ + R + AL + +M G
Sbjct: 372 ICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPD 431
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
++ +L D C G L +A K EM+ +G
Sbjct: 432 NVIYTILIDGFCRNGALSDALKMRDEMLARG 462
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 81/149 (54%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G++P++V+ N LI YC+ + KAY+ + KM I PD SY ++I G
Sbjct: 598 MLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEAN 657
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA ++ EM++ G + YN + +C ++++A ++ +M+E G++P+ TY+
Sbjct: 658 LEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSS 717
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPN 149
++++ ++ + M+ G +P+
Sbjct: 718 LINGHVSQDNMKEAFRFHDEMLQRGLVPD 746
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 35/216 (16%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGL---GL 57
M +KPD V+YN LID +CK ++ +A ++ + M +DI PD ISY +++ G GL
Sbjct: 528 MVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGL 587
Query: 58 V--------------------------------GQPDKARDVLKEMKEYGCYPDAAAYNA 85
+ G KA + L +M G PD+ +YN
Sbjct: 588 LPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNT 647
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
I Y L A L++EM ++GL N TYNL F ++ + + +M+ G
Sbjct: 648 LIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIG 707
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
P+ + L+ Q+ ++ A + ++M+++G
Sbjct: 708 INPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGL 743
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/228 (19%), Positives = 91/228 (39%), Gaps = 37/228 (16%)
Query: 13 YNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMK 72
Y+ L+ Y + +++ + + + +R + +S + + ++GGL G D A ++ E+
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVV 249
Query: 73 EYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLR 132
G + N + C ++ + + +M KG+ + TYN
Sbjct: 250 RGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLI---------- 299
Query: 133 SSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLF 192
N YC R+ VE A QL N +G +L + +
Sbjct: 300 ---NAYC----------------------REGLVEEAFQLLNSFSSRGMEPGLLTYNAIL 334
Query: 193 DLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
LC +GK A+ +EM++ G P+ ++ + L+E+ + L+
Sbjct: 335 YGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTL--LVEICRRDNILE 380
>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 665
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 108/217 (49%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
+P +V+Y L++ CK +A K++++MR + +P++++Y II G+ + D AR
Sbjct: 169 QPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQ 228
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
+L + YG PD +Y ++ C AKR D L EMVE PN T+++ R F
Sbjct: 229 ILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFC 288
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+ + + RM GC NT C ++ +Q +V+ A + N+M G +
Sbjct: 289 RGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTI 348
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ LC G+ +A++ EM+ K P++V+F
Sbjct: 349 SYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTF 385
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 110/243 (45%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
M V PD +Y LI C +V A +++ M + P V++YT ++ + +
Sbjct: 131 MPVPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQ 190
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
A VL EM+ GC P+ YN I C R+ DA +++ + G P+ +Y +
Sbjct: 191 AMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLK 250
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
+ L+C M+ C+PN + LV+ R VE A+++ + M E G +
Sbjct: 251 GLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTA 310
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLS 243
+ +++ + +C G++ +A + M G P +S+ + + A + E + L
Sbjct: 311 NTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELL 370
Query: 244 NKM 246
N+M
Sbjct: 371 NEM 373
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 122/282 (43%), Gaps = 14/282 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G P+IV+YN +I+ C++ +V+ A +I+ ++ PD +SYT+++ GL +
Sbjct: 198 MRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKR 257
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ + EM E C P+ ++ +R +C + A ++D M E G + N T N+
Sbjct: 258 WEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNI 317
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ M GC P+T S ++K R + E A +L N+MV K
Sbjct: 318 VINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKN 377
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR----------RIKALM 230
+ + +LC G + +A +M E G V++ R+ + +
Sbjct: 378 CPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSAL 437
Query: 231 ELANKQEALQNLSNKMALFGPSMIPKR----EEYLAEMSASD 268
EL N N L +R E LAEM +D
Sbjct: 438 ELFNSLPCEPNTITYTTLLTGLCHAERLDAAAELLAEMMQND 479
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 116/254 (45%), Gaps = 5/254 (1%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P+ V++N I + C+ +++A ++E+M + S +++Y +++ G + G+ D A ++
Sbjct: 380 PNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALEL 439
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
+ C P+ Y + C A+RL A+ L+ EM++ N T+N+ F
Sbjct: 440 FNSLP---CEPNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQ 496
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ + L +MM GC PN + L+ E AL+L + +V KG +
Sbjct: 497 KGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTIT 556
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMA 247
+ D+L ++ EA + F + + G +P V + +I L L + E + +
Sbjct: 557 YSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKI--LSALCKRCETDRAIDFFAH 614
Query: 248 LFGPSMIPKREEYL 261
+ S +P Y+
Sbjct: 615 MVSNSCMPNESTYV 628
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 95/219 (43%), Gaps = 3/219 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PD+ LI C+ + A +++ DV +Y +++ G G+ D A
Sbjct: 65 GEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNTLVAGYCRYGRLDAA 124
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
R ++ M PDA Y IR C R+ DA L+D+M+ + P+ TY +
Sbjct: 125 RRLIASMP---VPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEA 181
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
S+ + + M GC PN + ++ R+++V+ A Q+ N + GF
Sbjct: 182 VCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPD 241
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + LC + + E F EM+E P++V+F
Sbjct: 242 TVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTF 280
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/181 (19%), Positives = 90/181 (49%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
++V++N L+ +C+ VE+A ++V++M + +P++I++ +++ G+ ++A ++L
Sbjct: 483 NVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELL 542
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
+ G D Y++ + R+ +A + + + G+ P A YN
Sbjct: 543 HGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKR 602
Query: 129 NDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVS 188
+ + + + M+ C+PN + + L++ R+ ++ A + +++ +G S L+
Sbjct: 603 CETDRAIDFFAHMVSNSCMPNESTYVILIEGLAREGLLKEARYVLSELCSRGVLSKSLIE 662
Query: 189 D 189
D
Sbjct: 663 D 663
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 96/212 (45%), Gaps = 6/212 (2%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
+P+ ++Y L+ C +++ A +++ +M D +V+++ ++ G ++A +
Sbjct: 446 EPNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIE 505
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
++++M E+GC P+ +N + +A L+ +V KG+S + TY+ V
Sbjct: 506 LVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLS 565
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMF---LVKLCKRQEKVEIALQLWNDMVEKGFGS 183
+ + + ++ + G P ++ M+ L LCKR E + A+ + MV
Sbjct: 566 REDRIEEAVQMFHAVQDMGMRP--KAVMYNKILSALCKRCE-TDRAIDFFAHMVSNSCMP 622
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
+L + L G L EA E+ +G
Sbjct: 623 NESTYVILIEGLAREGLLKEARYVLSELCSRG 654
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 58/122 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G P+++++N L+D +D E+A +++ + + IS D I+Y+SI+ L +
Sbjct: 510 MMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDR 569
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A + +++ G P A YN + C A MV PN +TY +
Sbjct: 570 IEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPNESTYVI 629
Query: 121 FF 122
Sbjct: 630 LI 631
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 53/107 (49%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ D ++Y+ ++DV ++ ++E+A ++ ++D + P + Y I+ L + D+A
Sbjct: 549 GISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDRA 608
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGL 111
D M C P+ + Y I L++A ++ E+ +G+
Sbjct: 609 IDFFAHMVSNSCMPNESTYVILIEGLAREGLLKEARYVLSELCSRGV 655
Score = 40.0 bits (92), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 37/75 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+++MG++P V YN ++ CK + ++A M P+ +Y +I GL G
Sbjct: 580 VQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPNESTYVILIEGLAREGL 639
Query: 61 PDKARDVLKEMKEYG 75
+AR VL E+ G
Sbjct: 640 LKEARYVLSELCSRG 654
>gi|255542890|ref|XP_002512508.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548469|gb|EEF49960.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 444
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 129/228 (56%), Gaps = 4/228 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G+ P+ V++N LID +C D+ V A K+ +M + + P+V++Y S+I GL G+
Sbjct: 206 MKADGICPNEVTFNILIDGFCNDKNVSVAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGK 265
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A + +M P+ +NA + +C K ++ A L ++M ++ ++PN TTYN+
Sbjct: 266 VNEATTLRDQMVNSCLEPNIITHNALLNGFCKNKMVKQAGELFEDMPKQRITPNVTTYNI 325
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPN--TQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
+ ++ ++ LY M+G G P+ T +C+ +V LC R+ +E A ++M
Sbjct: 326 LIDAYCKDENMEDAFALYRIMLGKGVYPDVSTYNCL-IVGLC-RKGDLEGARNRVSEMDT 383
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
K + ++ ++L D LC+ G++ + + EM +KG KPSQ+++ +
Sbjct: 384 KHLKADLITYNILMDSLCNKGEMKKTLRLLDEMCKKGLKPSQLTYNTM 431
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 67/132 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + + P++ +YN LID YCKD +E A+ + M + + PDV +Y +I GL G
Sbjct: 311 MPKQRITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVYPDVSTYNCLIVGLCRKGD 370
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ AR+ + EM D YN + + C ++ L+DEM +KGL P+ TYN
Sbjct: 371 LEGARNRVSEMDTKHLKADLITYNILMDSLCNKGEMKKTLRLLDEMCKKGLKPSQLTYNT 430
Query: 121 FFRVFYWSNDLR 132
+ +LR
Sbjct: 431 MIDGYSKEGNLR 442
>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 120/227 (52%), Gaps = 2/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD+V+YN L+D K+ + ++A K+ + + + PD ++Y SI+ GL
Sbjct: 210 MPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSN 269
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A ++ K+M GC P+ A Y+ + +C AK++ DA +++EM + G P+ TYN+
Sbjct: 270 MDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNI 329
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEK 179
+N + + L+ M+ GC P+ S + L LCK KV A L++ M+E+
Sbjct: 330 LLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTN-KVHDARVLFDRMIER 388
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ ++L D LC GKL EA+ +M G P V++ +
Sbjct: 389 KLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTL 435
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 123/246 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G + V+YN LI+ CKD +E+AYK++E+M + PD I+Y +I+ GL +G+
Sbjct: 140 MIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGK 199
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A+ M G PD AYN + + +A L +++ KG P+ TYN
Sbjct: 200 VSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNS 259
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+++ + ++ +M+ +GC PN + ++ R +KV+ A ++ +M + G
Sbjct: 260 ILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIG 319
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
++ ++L D LC + +A + F M++ G P VS+ + + NK +
Sbjct: 320 AVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDAR 379
Query: 241 NLSNKM 246
L ++M
Sbjct: 380 VLFDRM 385
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 122/249 (48%), Gaps = 4/249 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MRE P+ ++ ++ +CK ++ YK+ E+M D ISPD I Y +I G G+
Sbjct: 1 MRE--CSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGR 58
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + +EM G P YN+ + +C ++++A L M EKG P+ TY+
Sbjct: 59 VDEANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYST 118
Query: 121 FFRVFYWSNDLRSSWN-LYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ + + L+ +M+ GC NT + L+ + E +E A +L +M K
Sbjct: 119 IISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASK 178
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEA 238
G+ + + + LC MGK+ EA++ F M +G+ P V++ + AL + EA
Sbjct: 179 GYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEA 238
Query: 239 LQNLSNKMA 247
++ + +A
Sbjct: 239 MKLFKDVIA 247
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 114/238 (47%), Gaps = 5/238 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ PD + YN LID Y K +V++A ++ E+M + P + +Y S++ +
Sbjct: 34 MLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEMVSVGLEPSIYTYNSLLNAFCKETK 93
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDA-SGLMDEMVEKGLSPNATTYN 119
+A ++ K M E G PD Y+ I C ++ +A L +M+E+G S N YN
Sbjct: 94 MKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYN 153
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLP-NTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
++ ++ L M G +P N L LC R KV A Q ++ M
Sbjct: 154 ALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLC-RMGKVSEAKQFFDSMPS 212
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQ 236
+G+ ++ + L D L GK EA K F ++I KG+ P V++ I L+ LA K
Sbjct: 213 RGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSI--LLGLARKS 268
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 93/177 (52%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G P+ +Y+ ++ +C+ ++V+ A+K++E+M PDV++Y ++ GL DKA
Sbjct: 284 GCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKA 343
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++ M + GC PD +Y+ + C ++ DA L D M+E+ L P+ T+N+
Sbjct: 344 HELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDG 403
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
+ L + +L +M +GC P+ + L+ ++Q + A +L M EKGF
Sbjct: 404 LCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGF 460
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 104/224 (46%), Gaps = 1/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIV-EKMRDEDISPDVISYTSIIGGLGLVG 59
M E G +PD+V+Y+ +I CK +V +A +++ KM + S + ++Y ++I GL
Sbjct: 104 MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDE 163
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
++A +L+EM G PD YN + C ++ +A D M +G SP+ YN
Sbjct: 164 NIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYN 223
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
Y + L+ ++ G +P+T + ++ R+ ++ A +++ MV
Sbjct: 224 GLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVAS 283
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G ++ C K+ +A K EM + G P V++
Sbjct: 284 GCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTY 327
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 60/111 (54%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G PDIVSY+ +++ CK +V A + ++M + + PDV+++ ++ GL G+
Sbjct: 350 MVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGK 409
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGL 111
D+A+D+L +M GC PD AYN + R A L M EKG
Sbjct: 410 LDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGF 460
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 47/79 (59%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E + PD+V++N L+D CK ++++A ++++M +PD ++Y +++ GL G+
Sbjct: 385 MIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGR 444
Query: 61 PDKARDVLKEMKEYGCYPD 79
+A + + MKE G D
Sbjct: 445 HIQADRLTQAMKEKGFLSD 463
>gi|22128591|gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]
Length = 592
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 113/218 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + KP+ Y+ +ID +CKD ++ A ++ +M+ + I PD+ +Y+++I L + Q
Sbjct: 204 MEQGSTKPNTCIYSIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQ 263
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ R + EM YP+ +N+ I C ++ DA +M M+EKG+ P+ TYN+
Sbjct: 264 WENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNM 323
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + ++ M+ PN S L+ RQ+K++ A+Q+ ++ +KG
Sbjct: 324 IIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNILINGYARQKKIDEAMQVCREISQKG 383
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
I+ +VL L ++G+ A+ F EM+ GH P
Sbjct: 384 LKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIP 421
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 115/223 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + + P++ ++N +ID CK+ +VE A +I+ M ++ + PDVI+Y II G GL GQ
Sbjct: 274 MIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQ 333
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+AR++ M P+ +YN I Y K++ +A + E+ +KGL P+ T N+
Sbjct: 334 VDRAREIFDSMINKSIEPNIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNV 393
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ +S+ N + M+ G +P+ + L+ + VE A+ ++ + +
Sbjct: 394 LLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRR 453
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ I + + D LC GKL +A +F ++ G P +++
Sbjct: 454 EDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITY 496
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 109/223 (48%), Gaps = 7/223 (3%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDI-SPDVISYTSIIGGLGLVGQPDK 63
G+ + V +N L+ + +V+ A + +K+ E+I P+ + Y +++ GL G K
Sbjct: 137 GIPFNQVIFNTLLRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQK 196
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
A D+L+ M++ P+ Y+ I +C L A+ L++EM +K + P+ TY+
Sbjct: 197 AFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLID 256
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMF---LVKLCKRQEKVEIALQLWNDMVEKG 180
+ + L+ M+ PN C F + LCK + KVE A ++ M+EKG
Sbjct: 257 ALCKLSQWENVRTLFLEMIHLNIYPNV--CTFNSVIDGLCK-EGKVEDAEEIMRYMIEKG 313
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ +++ D G++ A + F MI K +P+ +S+
Sbjct: 314 VDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNIISY 356
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 65/116 (56%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
+I Y +ID CK+ +++KA+ EK+ + PDVI+YT++I G G D+A+D+L
Sbjct: 457 NIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDML 516
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++M++ GC D YN +R + + ++ + ++E+ K S A T L +
Sbjct: 517 RKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFEAATVELLMDI 572
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 62/129 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD+ ++ L+ Y K+ VE+A K+ ++ YT++I GL G+
Sbjct: 414 MLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGK 473
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA +++ G +PD Y A I YC L +A ++ +M + G + TYN+
Sbjct: 474 LDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNV 533
Query: 121 FFRVFYWSN 129
R F SN
Sbjct: 534 IVRGFLRSN 542
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/220 (20%), Positives = 93/220 (42%), Gaps = 7/220 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+ + G+KP IV+ N L+ + + + A ++M PD+ ++ +++GG G
Sbjct: 379 ISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGL 438
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A +++ + Y A I C +L A +++ GL P+ TY
Sbjct: 439 VEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTA 498
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L + ++ +M GCL + ++ +V+ R KV ++ K
Sbjct: 499 MISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKS 558
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQ 220
F ++L D++ + + S L MI + H+ ++
Sbjct: 559 FSFEAATVELLMDIIAE-------DPSLLNMIPEFHRDNK 591
>gi|224081016|ref|XP_002306265.1| predicted protein [Populus trichocarpa]
gi|222855714|gb|EEE93261.1| predicted protein [Populus trichocarpa]
Length = 548
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 118/233 (50%), Gaps = 13/233 (5%)
Query: 3 EMGVKPDIVSYNCLIDVYCK----------DRQVEKAYKIVEKMRDEDISPDVISYTSII 52
E G++ +V+YN L++ C+ +R + A + ++MR+ I PDV S++ ++
Sbjct: 273 ERGIEATVVTYNVLLNGICRRASLHPESRFERTITLAENLFDEMRERGIEPDVTSFSIVL 332
Query: 53 GGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLS 112
+P+ D LK MKE G P Y + ++ C R+ DA L+ EMV G+S
Sbjct: 333 HVYSRAHKPELTLDKLKLMKEKGICPSVVTYTSVVKCLCSCGRIEDAEELLGEMVRNGVS 392
Query: 113 PNATTYNLFFRVFYWSNDLRSSWNLYCRMM--GTGCLPNTQSCMFLVKLCKRQEKVEIAL 170
A TYN FF+ + D S+ LY +M G G L S L+++ +++I
Sbjct: 393 RTAVTYNCFFKEYMGRKDAESALKLYKKMREDGLGSL-GLHSYNILLRMFMMLNRLDIVN 451
Query: 171 QLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++W D+ G G + +L LC+ K EA K F+EMIEKG P +V+F
Sbjct: 452 EIWEDLKSSGLGPDLDSYTMLIHGLCEKEKWREACKFFVEMIEKGLLPQKVTF 504
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 65/130 (50%), Gaps = 1/130 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDI-SPDVISYTSIIGGLGLVGQPDK 63
GV V+YNC Y + E A K+ +KMR++ + S + SY ++ ++ + D
Sbjct: 390 GVSRTAVTYNCFFKEYMGRKDAESALKLYKKMREDGLGSLGLHSYNILLRMFMMLNRLDI 449
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
++ +++K G PD +Y I C ++ R+A EM+EKGL P T+ ++
Sbjct: 450 VNEIWEDLKSSGLGPDLDSYTMLIHGLCEKEKWREACKFFVEMIEKGLLPQKVTFETLYK 509
Query: 124 VFYWSNDLRS 133
S+ LR+
Sbjct: 510 GLIQSDMLRT 519
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 83/218 (38%), Gaps = 46/218 (21%)
Query: 16 LIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYG 75
L+D CK V+ +I K R SP+V YT +I G +G+ D A LKE E G
Sbjct: 217 LLDTLCKYGYVKVGVEIFNK-RKHRFSPNVKMYTVLIYGWCKIGRIDMAERFLKETGERG 275
Query: 76 CYPDAAAYNAAIRNYC----------IAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
YN + C + + A L DEM E+G+ P+ T++++ V+
Sbjct: 276 IEATVVTYNVLLNGICRRASLHPESRFERTITLAENLFDEMRERGIEPDVTSFSIVLHVY 335
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
R K E+ L M EKG +
Sbjct: 336 -----------------------------------SRAHKPELTLDKLKLMKEKGICPSV 360
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + LC G++ +AE+ EM+ G + V++
Sbjct: 361 VTYTSVVKCLCSCGRIEDAEELLGEMVRNGVSRTAVTY 398
>gi|15237345|ref|NP_197146.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170213|sp|Q9FFE3.1|PP388_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16420, mitochondrial; Flags: Precursor
gi|9759124|dbj|BAB09609.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|332004907|gb|AED92290.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 535
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 115/227 (50%), Gaps = 1/227 (0%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
G+ P+I + N L+ CK +E AYK+++++ + P++++YT+I+GG G +
Sbjct: 185 FGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMES 244
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
A+ VL+EM + G YPDA Y + YC R +A+ +MD+M + + PN TY + R
Sbjct: 245 AKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIR 304
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
+ N++ M+ +P++ C ++ KV+ A LW M++
Sbjct: 305 ALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMP 364
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALM 230
+ L LC G++ EA K F E EKG PS +++ + A M
Sbjct: 365 DNALLSTLIHWLCKEGRVTEARKLFDE-FEKGSIPSLLTYNTLIAGM 410
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 121/240 (50%), Gaps = 2/240 (0%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
MG+ P++V+Y ++ Y +E A +++E+M D PD +YT ++ G +G+ +
Sbjct: 220 MGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSE 279
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
A V+ +M++ P+ Y IR C K+ +A + DEM+E+ P+++
Sbjct: 280 AATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVID 339
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
+ + + L+ +M+ C+P+ L+ ++ +V A +L+ D EKG
Sbjct: 340 ALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLF-DEFEKGSIP 398
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEALQNL 242
+L + L +C+ G+L EA + + +M E+ KP+ ++ I+ L + N +E ++ L
Sbjct: 399 SLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVL 458
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 116/245 (47%), Gaps = 4/245 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G PD +Y L+D YCK + +A +++ M +I P+ ++Y +I L +
Sbjct: 252 MLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKK 311
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR++ EM E PD++ I C ++ +A GL +M++ P+ +
Sbjct: 312 SGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLST 371
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+ + L+ G +P+ + L+ +C++ E E A +LW+DM E+
Sbjct: 372 LIHWLCKEGRVTEARKLFDE-FEKGSIPSLLTYNTLIAGMCEKGELTE-AGRLWDDMYER 429
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI-KALMELANKQEA 238
+VL + L G + E + EM+E G P++ +F + + L +L +++A
Sbjct: 430 KCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDA 489
Query: 239 LQNLS 243
++ +S
Sbjct: 490 MKIVS 494
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 82/180 (45%), Gaps = 1/180 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E PD +ID C+D +V++A + KM + PD +++I L G+
Sbjct: 322 MLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGR 381
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR + E E G P YN I C L +A L D+M E+ PNA TYN+
Sbjct: 382 VTEARKLFDEF-EKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNV 440
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ +++ + M+ GC PN + + L + ++ K E A+++ + V G
Sbjct: 441 LIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSMAVMNG 500
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 93/230 (40%), Gaps = 5/230 (2%)
Query: 14 NCLIDV---YCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKE 70
N ID+ Y + E + +I ++ D + V S +++ L + D + K
Sbjct: 121 NLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKN 180
Query: 71 MKE-YGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSN 129
KE +G P+ N ++ C + A ++DE+ GL PN TY +
Sbjct: 181 SKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARG 240
Query: 130 DLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSD 189
D+ S+ + M+ G P+ + L+ + + A + +DM + +
Sbjct: 241 DMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYG 300
Query: 190 VLFDLLCDMGKLVEAEKSFLEMIEKGHKP-SQVSFRRIKALMELANKQEA 238
V+ LC K EA F EM+E+ P S + + I AL E EA
Sbjct: 301 VMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEA 350
>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Vitis vinifera]
Length = 755
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 113/223 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+K + +YN +ID CK+ +E A + +M++ +PD+++Y S+I G G +G
Sbjct: 246 MGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGL 305
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+ + ++MK+ C PD YNA I +C +R+ A + EM GL PN TY+
Sbjct: 306 LDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYST 365
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F F L+ + + M PN + L+ + + AL+L ++++ G
Sbjct: 366 FIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAG 425
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ L D LC+ G++ EAE+ F M+ G P+Q ++
Sbjct: 426 IKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETY 468
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 125/250 (50%), Gaps = 4/250 (1%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
+ G+K ++V+Y L+D C++ ++++A ++ M + ++P+ +YT+++ G + +
Sbjct: 423 QAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEME 482
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
A+D+LKEMKE PD Y + C RL +A L+ E+ E G++ NA Y
Sbjct: 483 YAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLM 542
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
++ S + L M+ G + + C + LCK V+ A+ + M E G
Sbjct: 543 DAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCK-SGLVQEAMHHFGRMSEIGL 601
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQ 240
+ V L D LC A+K F EM++KG P ++++ I M+ N QEAL
Sbjct: 602 QPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEAL- 660
Query: 241 NLSNKMALFG 250
NL ++M G
Sbjct: 661 NLRDRMIEIG 670
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 117/249 (46%), Gaps = 1/249 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ PD+++YN LI+ +CK ++ KA++ + +M+ + P+V++Y++ I G
Sbjct: 316 MKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGM 375
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A +M+ P+ Y + I C A L +A L++E+++ G+ N TY
Sbjct: 376 LQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTA 435
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++ + ++ M+ G PN ++ LV + +++E A + +M EK
Sbjct: 436 LLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKC 495
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI-KALMELANKQEAL 239
+L+ + LC+ +L EA+ E+ E G + V + + A + EAL
Sbjct: 496 IKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEAL 555
Query: 240 QNLSNKMAL 248
L + L
Sbjct: 556 TLLEEMLDL 564
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 115/248 (46%), Gaps = 2/248 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E +KPD++ Y ++ C + ++E+A ++ ++++ I+ + + YT+++ GQ
Sbjct: 491 MKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQ 550
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A +L+EM + G Y A I C + +++A M E GL PN Y
Sbjct: 551 ATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTA 610
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+N + L+ M+ G +P+ + L+ + ++ AL L + M+E G
Sbjct: 611 LVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIG 670
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEAL 239
+ L L G++ +A EMI KG P +V + IK L EAL
Sbjct: 671 MELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEAL 730
Query: 240 QNLSNKMA 247
+ L N+MA
Sbjct: 731 E-LQNEMA 737
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 125/261 (47%), Gaps = 2/261 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV P+ +Y L+ + K +++E A I+++M+++ I PD++ Y +I+ GL +
Sbjct: 456 MLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESR 515
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A+ ++ E+KE G +A Y + Y + + +A L++EM++ GL TY
Sbjct: 516 LEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCA 575
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
S ++ + + + RM G PN LV + E+A +L+++M++KG
Sbjct: 576 LIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKG 635
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ L D G L EA MIE G + ++ + + + + + +
Sbjct: 636 MMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKAR 695
Query: 241 NLSNKMALFGPSMIPKREEYL 261
NL ++M G ++P Y+
Sbjct: 696 NLLDEM--IGKGVLPDEVVYM 714
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 62/111 (55%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ PD ++Y LID K +++A + ++M + + D+ +YT++I GL GQ
Sbjct: 631 MLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQ 690
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGL 111
KAR++L EM G PD Y I+ Y ++ +A L +EM ++G+
Sbjct: 691 VQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGM 741
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 94/234 (40%), Gaps = 1/234 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P ++ L + +E+A + KMR + P S +++ L VG+ D +R
Sbjct: 183 PGFGVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKF 242
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
K+M G YN I C L A L +M E G +P+ TYN
Sbjct: 243 FKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGK 302
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
L ++ +M C P+ + L+ + E++ A + ++M G ++
Sbjct: 303 LGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVT 362
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQ 240
D C G L EA K F++M P++ ++ I A + N EAL+
Sbjct: 363 YSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALK 416
>gi|255580124|ref|XP_002530894.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529547|gb|EEF31500.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 519
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 113/219 (51%), Gaps = 1/219 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MRE D+++YN L++ +CK +V +AYK+ +M I PD +++ I
Sbjct: 239 MREQQCAVDVLAYNSLLEAFCKGGKVSEAYKMFREMGSNGIKPDACTFSIFIRAYCEAND 298
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A VL EMK Y P+ YN I+ C +++ +A L++E++E+ P+A +YN
Sbjct: 299 IHLAYRVLDEMKRYDLVPNVFTYNCMIKKLCKKEKVEEAYQLLNEIIERSGQPDAWSYNA 358
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+++ S+ L RM+ CLP+ S L+KL R + + A+++W M EKG
Sbjct: 359 ILAYHCEHSEVNSATRLISRMVKDNCLPDKHSYNMLLKLLIRVGRFDRAIEVWESMGEKG 418
Query: 181 FGSYILVSDVLFDLLC-DMGKLVEAEKSFLEMIEKGHKP 218
F + V+ LC GKL EA K F MI++G P
Sbjct: 419 FYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMIDEGIPP 457
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 119/232 (51%), Gaps = 5/232 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+KP I + L+ V CK + + A +I ++++ + +Y+ ++ G G +G+
Sbjct: 170 MVEFGLKPTIDDLDQLLYVLCKRKHAKHAQQIFDRVKHQ-FQTRAKTYSILVRGWGDIGE 228
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A V EM+E C D AYN+ + +C ++ +A + EM G+ P+A T+++
Sbjct: 229 SVSACKVFDEMREQQCAVDVLAYNSLLEAFCKGGKVSEAYKMFREMGSNGIKPDACTFSI 288
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPN--TQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
F R + +ND+ ++ + M +PN T +CM + KLCK+ EKVE A QL N+++E
Sbjct: 289 FIRAYCEANDIHLAYRVLDEMKRYDLVPNVFTYNCM-IKKLCKK-EKVEEAYQLLNEIIE 346
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALM 230
+ + + C+ ++ A + M++ P + S+ + L+
Sbjct: 347 RSGQPDAWSYNAILAYHCEHSEVNSATRLISRMVKDNCLPDKHSYNMLLKLL 398
>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
Length = 475
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 119/233 (51%), Gaps = 6/233 (2%)
Query: 12 SYNCLIDVYCKDRQVEKAYKIVEKMRDE-DISPDVISYTSIIGGLGLVGQPDKARDVLKE 70
SYN L++ CK ++V +A+ I M E + PDV+SY+ +I G + + +A + K+
Sbjct: 123 SYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQ 182
Query: 71 MKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSND 130
M + C P+ YNA + R+ DA G+ +EM+ G SP+ TY+ F +
Sbjct: 183 MIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARK 242
Query: 131 LRSSWNLYCRMMGTGCLPN--TQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVS 188
+ L+ M+ GC PN T +C+ L LCK + K + A +L+ MVE+G +
Sbjct: 243 HDQAHELFEAMISRGCRPNAVTYNCL-LHGLCK-ESKPDEAHELFRKMVERGCDPDKVTY 300
Query: 189 DVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEALQ 240
L C++GK+ +A + F EM+ KGH P V++ +K EA Q
Sbjct: 301 TTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQ 353
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 113/220 (51%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E V PD+VSY+ LID +CK ++ +A K+ ++M D + P+V +Y + + GL G+
Sbjct: 150 ERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIA 209
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
A+ V +EM GC PD Y+ I + +A++ A L + M+ +G PNA TYN
Sbjct: 210 DAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLL 269
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
+ + L+ +M+ GC P+ + L+ K+E A++++++MV KG
Sbjct: 270 HGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHD 329
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
++ + L GK EA + F M+ + KP VS
Sbjct: 330 PDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVS 369
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 107/212 (50%), Gaps = 1/212 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD+++Y+ LI + R+ ++A+++ E M P+ ++Y ++ GL +
Sbjct: 218 MISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESK 277
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
PD+A ++ ++M E GC PD Y + +C ++ A + DEMV KG P+ YN
Sbjct: 278 PDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNC 337
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE-K 179
+ F+ + + L+ M+ C P+T S ++ + ++++ A++++ M +
Sbjct: 338 LLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDH 397
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEM 211
G ++ + L LC +L EA K F E+
Sbjct: 398 GCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEI 429
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 108/228 (47%), Gaps = 3/228 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++ P++ +YN ++ + ++ A + E+M SPDVI+Y+++I G L +
Sbjct: 183 MIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARK 242
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A ++ + M GC P+A YN + C + +A L +MVE+G P+ TY
Sbjct: 243 HDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTT 302
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + + ++ M+ G P+ + L+K R K A QL+ MV +
Sbjct: 303 LLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRE 362
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGH--KPSQVSFRRI 226
+ +++ D L +L +A + F E +E+ H P V++ +
Sbjct: 363 CKPDTVSHNIMIDGLSKAKRLDDAVEVF-ERMEQDHGCSPDLVTYNSL 409
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 101/215 (46%), Gaps = 11/215 (5%)
Query: 16 LIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEM---- 71
+I CK +V+ A ++E M PD+ +++ +I L + +A++ L+ M
Sbjct: 55 VIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTI 114
Query: 72 --KEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMV-EKGLSPNATTYNLFFRVFYWS 128
+ C+ +YN+ + + C AK++ A + MV E+ + P+ +Y++ F
Sbjct: 115 STRASSCF----SYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKI 170
Query: 129 NDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVS 188
++L + LY +M+ C+PN + + R+ ++ A ++ +M+ G ++
Sbjct: 171 DELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITY 230
Query: 189 DVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
L K +A + F MI +G +P+ V++
Sbjct: 231 STLIHGFSLARKHDQAHELFEAMISRGCRPNAVTY 265
>gi|357128238|ref|XP_003565781.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Brachypodium distachyon]
Length = 547
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 120/232 (51%), Gaps = 1/232 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+KPD+V+Y LI +CK + ++A K+ +M P Y +I GLG +
Sbjct: 292 MLDAGIKPDVVAYGTLISSFCKSGKCDEAIKVFREMEANGCMPSPHVYCMLINGLGSEER 351
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + K G + NA + YC + + + A ++DEM + G+ PNA TY++
Sbjct: 352 LDEALKYFELSKASGFPMEVPTCNAVVGAYCRSSKFQHAFKMVDEMRKTGIGPNARTYDI 411
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ S + ++N++ RM GC P + +V + E+V++AL++W M EKG
Sbjct: 412 ILQYLIKSQKIEEAYNVFQRMGMEGCEPQLNTYTMMVGMFCSNERVDMALKVWKQMKEKG 471
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIK-ALME 231
+ + L + LC +L EA F EM++KG +P F +K AL+E
Sbjct: 472 VLPCMHMFSSLINGLCFENRLEEACVYFQEMLDKGIRPPGQLFSNLKEALIE 523
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 100/240 (41%), Gaps = 1/240 (0%)
Query: 12 SYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEM 71
++ ++ Y + R+V++A + EKM + D+ Y +I L Q KA + KEM
Sbjct: 197 TFRLIVRRYARARKVKEAVETFEKMSSFGLKADLSDYNWLIDVLSKSKQVKKAHAIFKEM 256
Query: 72 KEYGCY-PDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSND 130
K G + PD Y + + K L + EM++ G+ P+ Y F S
Sbjct: 257 KRNGRFVPDLKTYTVLMEGWGHEKDLLMLKSVYQEMLDAGIKPDVVAYGTLISSFCKSGK 316
Query: 131 LRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDV 190
+ ++ M GC+P+ L+ +E+++ AL+ + GF + +
Sbjct: 317 CDEAIKVFREMEANGCMPSPHVYCMLINGLGSEERLDEALKYFELSKASGFPMEVPTCNA 376
Query: 191 LFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFG 250
+ C K A K EM + G P+ ++ I + + K E N+ +M + G
Sbjct: 377 VVGAYCRSSKFQHAFKMVDEMRKTGIGPNARTYDIILQYLIKSQKIEEAYNVFQRMGMEG 436
>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 757
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 120/231 (51%), Gaps = 3/231 (1%)
Query: 1 MREM---GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGL 57
MR+M G+ P++V+YN LID CK ++V++A ++ M ++ ++ISY S+I GL
Sbjct: 230 MRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCG 289
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
G+ + ++++EM+ G PD YN + +C L L+ EMV KGLSPN T
Sbjct: 290 KGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVT 349
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
Y + +L + ++ +M G PN ++ L+ ++ + A ++ ++M+
Sbjct: 350 YTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMI 409
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKA 228
GF ++ + L C +G++ EA M+E+G P VS+ + A
Sbjct: 410 VSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIA 460
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 119/220 (54%), Gaps = 2/220 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ P++V+Y LI+ CK + +A +I ++MR + P+ +YT++I G G ++A
Sbjct: 342 GLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEA 401
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
VL EM G P YNA + YC R+++A G++ MVE+GL P+ +Y+
Sbjct: 402 YKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAG 461
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGS 183
F +L ++ + M+ G LP+T + L++ LC +Q+ VE A L+ +M+ +G
Sbjct: 462 FCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVE-AFDLFREMMRRGLPP 520
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ L + C G+L +A + EM+++G P V++
Sbjct: 521 DEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTY 560
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 114/223 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G+ PD V+YN L++ +CK+ + + ++ +M + +SP+V++YT++I + G
Sbjct: 303 MRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGN 362
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++ +M+ G P+ Y I +C + +A ++ EM+ G SP+ TYN
Sbjct: 363 LSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNA 422
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + ++ + + M+ G P+ S ++ R+ ++ A Q+ +MVEKG
Sbjct: 423 LVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKG 482
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ L LC KLVEA F EM+ +G P +V++
Sbjct: 483 VLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTY 525
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 113/230 (49%), Gaps = 15/230 (6%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G P +V+YN L+ YC +V++A I+ M + + PDV+SY+++I G + KA
Sbjct: 412 GFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKA 471
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ +EM E G PD Y++ I+ C+ ++L +A L EM+ +GL P+ TY
Sbjct: 472 FQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINA 531
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQL------------ 172
+ +L + L+ M+ G LP+ + L+ ++ + ++A +L
Sbjct: 532 YCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPD 591
Query: 173 ---WNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
+N ++E + + L C G + EA++ F M+++ HKP+
Sbjct: 592 DVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPN 641
Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 117/226 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G++P+ +Y LID +C+ + +AYK++ +M SP V++Y +++ G +G+
Sbjct: 373 MRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGR 432
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A +L+ M E G PD +Y+ I +C + L A + +EMVEKG+ P+ TY+
Sbjct: 433 VQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSS 492
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L +++L+ MM G P+ + L+ ++ AL+L ++MV++G
Sbjct: 493 LIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRG 552
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
F + VL + L + A++ L++ + P V++ +
Sbjct: 553 FLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTL 598
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 101/223 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV P++ +YN +I +EK + KM E ISP+V++Y ++I +
Sbjct: 198 MVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKK 257
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A +L+ M G + +YN+ I C R+ + L++EM KGL P+ TYN
Sbjct: 258 VKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNT 317
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F +L L M+G G PN + L+ + + A+++++ M +G
Sbjct: 318 LVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRG 377
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
L D C G + EA K EMI G PS V++
Sbjct: 378 LRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTY 420
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 117/257 (45%), Gaps = 7/257 (2%)
Query: 5 GVKPDIVSYNCLIDVYCK-----DRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVG 59
G P ++SYN ++D + R + A ++ M +SP+V +Y II G+ G
Sbjct: 162 GFAPTVLSYNAVLDALLRRSSSNHRDYDDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQG 221
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+K +++M++ G P+ YN I C K++++A L+ M G++ N +YN
Sbjct: 222 DLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYN 281
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ L M G G +P+ + LV ++ + L L ++MV K
Sbjct: 282 SVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGK 341
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEA 238
G ++ L + +C G L A + F +M +G +P++ ++ I + EA
Sbjct: 342 GLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEA 401
Query: 239 LQNLSNKM-ALFGPSMI 254
+ LS + + F PS++
Sbjct: 402 YKVLSEMIVSGFSPSVV 418
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 83/180 (46%), Gaps = 18/180 (10%)
Query: 2 REM---GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLV 58
REM G+ PD V+Y LI+ YC D ++ KA ++ ++M PD ++Y+ +I GL
Sbjct: 511 REMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKK 570
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRN---------------YCIAKRLRDASGLM 103
+ A+ +L ++ PD YN I N +C+ + +A +
Sbjct: 571 ARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVF 630
Query: 104 DEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQ 163
M+++ PNA YNL ++ ++NLY + + +T + + LVK R+
Sbjct: 631 KTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAYNLYMELEHSSFACHTVAVIALVKALARE 690
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 80/181 (44%), Gaps = 5/181 (2%)
Query: 51 IIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAI-----RNYCIAKRLRDASGLMDE 105
++ L +G KA +L +G P +YNA + R+ + DA + +
Sbjct: 138 VVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAERVFRD 197
Query: 106 MVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEK 165
MV G+SPN TYN+ R DL +M G PN + L+ +++K
Sbjct: 198 MVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKK 257
Query: 166 VEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR 225
V+ A+ L M G + ++ + + + LC G++ E + EM KG P +V++
Sbjct: 258 VKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNT 317
Query: 226 I 226
+
Sbjct: 318 L 318
>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
Length = 695
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 113/226 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G+KPD+VS++CLI ++ + +++ A + +MR + PD + YT +IGG G
Sbjct: 226 MRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGL 285
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A V EM GC PD YN + C +RL DA GL++EM E+G+ P+ T+
Sbjct: 286 MSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTT 345
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L + L+ M+ P+ + L+ RQ ++ A LW+DM +
Sbjct: 346 LIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSRE 405
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ +L D C+ G++ +A EMI KG P+ +++ I
Sbjct: 406 IFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSI 451
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 125/241 (51%), Gaps = 1/241 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MRE GV PD+ ++ LI YC + +++KA ++ + M ++ + PD+++Y ++I G+ G
Sbjct: 331 MRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGD 390
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA D+ +M +P+ Y+ I ++C ++ DA G +DEM+ KG+ PN TYN
Sbjct: 391 LDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNS 450
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + S ++ +MM P+ + L+ +++K+ A +L N M ++
Sbjct: 451 IIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEK 510
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF-RRIKALMELANKQEAL 239
++ ++L + G + EA F +M KG +P + ++ I + N +EA
Sbjct: 511 VQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAF 570
Query: 240 Q 240
Q
Sbjct: 571 Q 571
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 116/227 (51%), Gaps = 2/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+KP IV+YN ++ C+ +KA+++ ++M D ++PDV S+T +IGG VG+
Sbjct: 156 MVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGE 215
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A + KEM+ G PD +++ I + ++ A + EM GL P+ Y +
Sbjct: 216 IEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTM 275
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
F + + + + M+G GCLP+ + L+ LCK + ++ A L N+M E+
Sbjct: 276 VIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLD-AEGLLNEMRER 334
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G + L C GKL +A + F M+ + +P V++ +
Sbjct: 335 GVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTL 381
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 108/223 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + V PD+V++N ++D + E A +V+ M + + P +++Y S++ GL G
Sbjct: 121 MEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGM 180
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA +V KEM ++G PD ++ I +C + +A + EM +G+ P+ +++
Sbjct: 181 WDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSC 240
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+F + + M G +P+ ++ R + AL++ ++MV G
Sbjct: 241 LIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCG 300
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + L + LC +L++AE EM E+G P +F
Sbjct: 301 CLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTF 343
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 72/141 (51%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ P+I++YN +I YC+ V K K ++KM +SPD+I+Y ++I G + A
Sbjct: 440 GILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDA 499
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+L M++ PD YN I + + +++A + ++M KG+ P+ TY
Sbjct: 500 FKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMING 559
Query: 125 FYWSNDLRSSWNLYCRMMGTG 145
+ + + ++ L+ M+ G
Sbjct: 560 HVTAGNSKEAFQLHDEMLQRG 580
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 69/162 (42%)
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
DK V+ EM++ +PD +N + A A L+D MV KGL P TYN
Sbjct: 112 DKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSV 171
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
+ S +W ++ M G P+ +S L+ R ++E AL+++ +M +G
Sbjct: 172 LKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGI 231
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ L L GK+ A EM G P V +
Sbjct: 232 KPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIY 273
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/243 (20%), Positives = 100/243 (41%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P ++ LI Y + R+ +A++ + D + + +++ L G P A D
Sbjct: 23 PQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALSRAGWPHLAADA 82
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
+ + + N + NYC A ++ EM ++ + P+ T+N+ +
Sbjct: 83 YRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFR 142
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ D ++ L M+ G P + ++K R + A +++ +M + G +
Sbjct: 143 AGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRS 202
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMA 247
+L C +G++ EA K + EM +G KP VSF + L K + +M
Sbjct: 203 FTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMR 262
Query: 248 LFG 250
FG
Sbjct: 263 CFG 265
>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
Japonica Group]
gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
Length = 648
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 113/226 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G+KPD+VS++CLI ++ + +++ A + +MR + PD + YT +IGG G
Sbjct: 287 MRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGL 346
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A V EM GC PD YN + C +RL DA GL++EM E+G+ P+ T+
Sbjct: 347 MSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTT 406
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L + L+ M+ P+ + L+ RQ ++ A LW+DM +
Sbjct: 407 LIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSRE 466
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ +L D C+ G++ +A EMI KG P+ +++ I
Sbjct: 467 IFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSI 512
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 125/241 (51%), Gaps = 1/241 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MRE GV PD+ ++ LI YC + +++KA ++ + M ++ + PD+++Y ++I G+ G
Sbjct: 392 MRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGD 451
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA D+ +M +P+ Y+ I ++C ++ DA G +DEM+ KG+ PN TYN
Sbjct: 452 LDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNS 511
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + S ++ +MM P+ + L+ +++K+ A +L N M ++
Sbjct: 512 IIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEK 571
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF-RRIKALMELANKQEAL 239
++ ++L + G + EA F +M KG +P + ++ I + N +EA
Sbjct: 572 VQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAF 631
Query: 240 Q 240
Q
Sbjct: 632 Q 632
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 115/224 (51%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+KP IV+YN ++ C+ +KA+++ ++M D ++PDV S+T +IGG VG+
Sbjct: 217 MVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGE 276
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A + KEM+ G PD +++ I + ++ A + EM GL P+ Y +
Sbjct: 277 IEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTM 336
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
F + + + + M+G GCLP+ + L+ LCK + ++ A L N+M E+
Sbjct: 337 VIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLD-AEGLLNEMRER 395
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G + L C GKL +A + F M+ + +P V++
Sbjct: 396 GVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTY 439
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 108/223 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + V PD+V++N ++D + E A +V+ M + + P +++Y S++ GL G
Sbjct: 182 MEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGM 241
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA +V KEM ++G PD ++ I +C + +A + EM +G+ P+ +++
Sbjct: 242 WDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSC 301
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+F + + M G +P+ ++ R + AL++ ++MV G
Sbjct: 302 LIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCG 361
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + L + LC +L++AE EM E+G P +F
Sbjct: 362 CLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTF 404
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 75/147 (51%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ P+I++YN +I YC+ V K K ++KM +SPD+I+Y ++I G + A
Sbjct: 501 GILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDA 560
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+L M++ PD YN I + + +++A + ++M KG+ P+ TY
Sbjct: 561 FKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMING 620
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQ 151
+ + + ++ L+ M+ G P+ +
Sbjct: 621 HVTAGNSKEAFQLHDEMLQRGFAPDDK 647
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 69/162 (42%)
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
DK V+ EM++ +PD +N + A A L+D MV KGL P TYN
Sbjct: 173 DKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSV 232
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
+ S +W ++ M G P+ +S L+ R ++E AL+++ +M +G
Sbjct: 233 LKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGI 292
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ L L GK+ A EM G P V +
Sbjct: 293 KPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIY 334
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/243 (20%), Positives = 100/243 (41%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P ++ LI Y + R+ +A++ + D + + +++ L G P A D
Sbjct: 84 PQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALSRAGWPHLAADA 143
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
+ + + N + NYC A ++ EM ++ + P+ T+N+ +
Sbjct: 144 YRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFR 203
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ D ++ L M+ G P + ++K R + A +++ +M + G +
Sbjct: 204 AGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRS 263
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMA 247
+L C +G++ EA K + EM +G KP VSF + L K + +M
Sbjct: 264 FTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMR 323
Query: 248 LFG 250
FG
Sbjct: 324 CFG 326
>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 125/245 (51%), Gaps = 1/245 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + + P++V++N L+D +CK+ +V A +++ M + + PDV++Y S++ G + +
Sbjct: 176 MTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTE 235
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR + M GC PD +Y+ I YC AKR+ +A L +EM+ +G +PN +YN
Sbjct: 236 VVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNT 295
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
LR + +L+ M G LPN + L+ +Q + A +L+ M
Sbjct: 296 LIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTY 355
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS-QVSFRRIKALMELANKQEAL 239
+++ ++L + +C G L +A + F E+ G +P+ Q+ I L + EAL
Sbjct: 356 LKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEAL 415
Query: 240 QNLSN 244
+ N
Sbjct: 416 EAFRN 420
Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 115/223 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G + ++V+Y+ LI CK R+V +A I M+ +DISP + +YTS+I GL +
Sbjct: 106 MEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSR 165
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A +L EM P+ +N + +C ++ A G++ M E G+ P+ TYN
Sbjct: 166 WKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNS 225
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ + L+ M+ GC P+ S L+ + ++++ A QL+N+M+ +G
Sbjct: 226 LMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQG 285
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + L LC +G+L EA+ F M G+ P+ ++
Sbjct: 286 STPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTY 328
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 107/226 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M EMGV+PD+V+YN L+ Y +V +A K+ + M + PDV SY+ +I G +
Sbjct: 211 MTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKR 270
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A+ + EM G P+ +YN I C RLR+A L M G PN TY +
Sbjct: 271 IDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAI 330
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F L ++ L+ M T PN LV + ++ A +L++++ G
Sbjct: 331 LLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIG 390
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + + + LC G L EA ++F M + G P + S+ I
Sbjct: 391 LQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVI 436
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 103/227 (45%), Gaps = 2/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ P+ + N LI+ +C+ ++V+ + ++ K + P ++++T++I GLG VG+
Sbjct: 1 MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK 60
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++ +M GC PD Y I C A+GL +M E G N TY+
Sbjct: 61 FAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYST 120
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+ + +++ M P + L++ LC E A L N+M
Sbjct: 121 LIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKE-ASALLNEMTSL 179
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ +VL D C GK++ AE M E G +P V++ +
Sbjct: 180 NIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSL 226
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 117/251 (46%), Gaps = 2/251 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G +PD +Y +I+ CK + A + +KM + +V++Y+++I L +
Sbjct: 71 MVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHSLCKYRR 130
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A D+ MK P Y + I+ C R ++AS L++EM + PN T+N+
Sbjct: 131 VNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNV 190
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + ++ + M G P+ + L+ +V A +L++ M+ KG
Sbjct: 191 LVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKG 250
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
+ +L + C ++ EA++ F EMI +G P+ VS+ I L +L +EA
Sbjct: 251 CKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREA- 309
Query: 240 QNLSNKMALFG 250
Q+L M G
Sbjct: 310 QDLFKNMHTNG 320
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 64/117 (54%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ +KP++V YN L++ CK ++ A ++ ++ + P+V YT+II GL G
Sbjct: 351 MQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGL 410
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
D+A + + M++ GC PD +YN IR + K A L+ EM ++G +A T
Sbjct: 411 LDEALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGFITDAGT 467
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 76/181 (41%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P+ VSYN LI C+ ++ +A + + M P++ +Y ++ G G
Sbjct: 281 MIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGY 340
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA + + M+ P+ YN + C + L+DA L E+ GL PN Y
Sbjct: 341 LGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTT 400
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
L + + M GC P+ S +++ + + A+ L +M ++G
Sbjct: 401 IINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRG 460
Query: 181 F 181
F
Sbjct: 461 F 461
>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
Length = 569
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 130/255 (50%), Gaps = 2/255 (0%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
EM P ++YN LI YC+ +++A +++ KM D++ +PDVI+YT+++ +G+ D
Sbjct: 280 EMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLD 339
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
A ++ ++M PD + + + C R+ DA L++E+ +G P TYN
Sbjct: 340 DAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVV 399
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG-- 180
+ SN +R + L G +PNT + LV C R + + ALQ + + +G
Sbjct: 400 DGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGP 459
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ + + ++ D LC G+ +A + + EMI++G+ P+ +F + + A++ +
Sbjct: 460 CPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAH 519
Query: 241 NLSNKMALFGPSMIP 255
L +M +G + P
Sbjct: 520 ELLEEMIKYGHTPGP 534
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 124/253 (49%), Gaps = 5/253 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIV-EKMRDEDISPDVISYTSIIGGLGLVG 59
M G+ + ++Y+ L+D CK ++++A ++ ++ +PD+++Y+++I GL G
Sbjct: 210 MLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAG 269
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ A D+ +EM C P A YN+ I YC A + +A L+ +MV+ +P+ TY
Sbjct: 270 RLRDAVDIFEEMS---CAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYT 326
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
F L ++ L+ +M+ P+ + LV + ++E AL+L ++ +
Sbjct: 327 TLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRR 386
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQ-EA 238
G I + + D C ++ +AE+ + +G P+ V++ + A A + +A
Sbjct: 387 GCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQA 446
Query: 239 LQNLSNKMALFGP 251
LQ L + GP
Sbjct: 447 LQYLDQLNSEGGP 459
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 102/217 (47%), Gaps = 4/217 (1%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD ++Y L+ K ++ A +++++M PD + T ++ L L + D AR++
Sbjct: 147 PDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDAREL 206
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASG-LMDEMVEKGLSPNATTYNLFFRVFY 126
++EM G +A Y+A + C +RL +A L+ E+ +G +P+ TY+
Sbjct: 207 VEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLC 266
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+ LR + +++ M C P + L+ R ++ A++L MV+ ++
Sbjct: 267 KAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVI 323
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
L C MG+L +A + F +M+ P V+F
Sbjct: 324 TYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTF 360
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 94/212 (44%), Gaps = 3/212 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E+G YN LI CK R +++A ++ M+ ++P + + +IGGL G+
Sbjct: 72 MAELGAVNHTTYYN-LIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGR 130
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A V ++M + PD Y + A RLRDA ++ EMV P+ TT +
Sbjct: 131 LRHALGVYRQMND-AHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTV 189
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+ + + + L M+ G N + LV LCK + E L ++ +
Sbjct: 190 VVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRR 249
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEM 211
GF I+ + D LC G+L +A F EM
Sbjct: 250 GFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM 281
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 100/227 (44%), Gaps = 3/227 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+R+ G+ PD V N ++ C R A + +KM E + + +Y ++I L
Sbjct: 37 IRDRGLSPDPVELNTILAELCDARDTTTAMALFDKMA-ELGAVNHTTYYNLIHPLCKARL 95
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A +L +MK G P +N I C A RLR A G+ +M P+ TY
Sbjct: 96 LDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQM-NDAHPPDFLTYTK 154
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ LR + + M+ +P+ + +V+ ++V+ A +L +M+ +G
Sbjct: 155 LVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRG 214
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFL-EMIEKGHKPSQVSFRRI 226
+ + L D LC +L EA L E+ +G P V++ +
Sbjct: 215 MAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTV 261
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 70/177 (39%), Gaps = 43/177 (24%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G P I +YNC++D YCK QV KA ++V R P+ ++Y ++ G G+ D+A
Sbjct: 387 GCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQA 446
Query: 65 RDVL-------------------------------------KEMKEYGCYPDAAAYNAAI 87
L +EM + G P AA + +
Sbjct: 447 LQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVV 506
Query: 88 RNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF------YWSNDLRSSWNLY 138
C A + + A L++EM++ G +P T + + +++L S LY
Sbjct: 507 FALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASELRLY 563
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 52/105 (49%), Gaps = 1/105 (0%)
Query: 3 EMGVKPDIVS-YNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
E G P V+ Y ++D C+D + + A + E+M P ++ +++ L QP
Sbjct: 456 EGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQP 515
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEM 106
+A ++L+EM +YG P +A + YC A ++ A L E+
Sbjct: 516 QQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASEL 560
Score = 45.1 bits (105), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 74/180 (41%), Gaps = 2/180 (1%)
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
+L E+++ G PD N + C A+ A L D+M E G + T YNL +
Sbjct: 33 LLDEIRDRGLSPDPVELNTILAELCDARDTTTAMALFDKMAELGAVNHTTYYNLIHPLC- 91
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+ L + L M G P T ++ R ++ AL ++ M + ++
Sbjct: 92 KARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAHPPDFLT 151
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKM 246
+ ++ L G+L +A + EM+ H P + + + L ++ + + L +M
Sbjct: 152 YTKLVHG-LSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEM 210
>gi|15229026|ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183419|sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810
gi|7576219|emb|CAB87909.1| putative protein [Arabidopsis thaliana]
gi|332644937|gb|AEE78458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 114/221 (51%), Gaps = 8/221 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G +P++ +YN L+ CK+ +V+ A K++ +M ++ PD +SYT++I + VG
Sbjct: 172 MKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGL 231
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ R++ + + P + YNA I C + A LM EMVEKG+SPN +Y+
Sbjct: 232 VKEGRELAERFE-----PVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYST 286
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
V S + +++ +M+ GC PN + LVK C + AL LWN M+ +G
Sbjct: 287 LINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMI-RG 345
Query: 181 FG--SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
FG ++ + L C G +V+A F M E G P+
Sbjct: 346 FGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPN 386
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 102/227 (44%), Gaps = 1/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+R G++P++V+YN L+ +C + KA + M + SP++ +Y S+I G G
Sbjct: 343 IRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGS 402
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A + +M GC P+ Y + C + ++A L++ M ++ +P+ T+N
Sbjct: 403 LDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNA 462
Query: 121 FFRVFYWSNDLRSSWNLYCRM-MGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
F + + L + ++ +M C PN + L+ + ++E A L ++ +
Sbjct: 463 FIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMR 522
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G + L C+ G A + +M+ G P +++ I
Sbjct: 523 GVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMI 569
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 117/291 (40%), Gaps = 77/291 (26%)
Query: 1 MREM---GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKM--------------------- 36
MREM G+ P+++SY+ LI+V C Q+E A+ + +M
Sbjct: 269 MREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFL 328
Query: 37 ---------------RDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAA 81
R + P+V++Y +++ G G KA V M+E GC P+
Sbjct: 329 RGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIR 388
Query: 82 AYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRM 141
Y + I + AKR G +D V+ W+ +M
Sbjct: 389 TYGSLINGF--AKR-----GSLDGA-----------------VYIWN-----------KM 413
Query: 142 MGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKL 201
+ +GC PN +V+ R K + A L M ++ + + LCD G+L
Sbjct: 414 LTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRL 473
Query: 202 VEAEKSFLEMIEKGHK--PSQVSFRRIKALMELANKQEALQNLSNKMALFG 250
AEK F +M E+ H+ P+ V++ + + AN+ E L+ ++ + G
Sbjct: 474 DWAEKVFRQM-EQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRG 523
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 99/244 (40%), Gaps = 32/244 (13%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
K +++ +I D QV+ ++++M+ + + S+I VG ++A +
Sbjct: 73 KHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVE 132
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
+ +KE+GC P YN + R++ + +M G PN TYN+ +
Sbjct: 133 MFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALC 192
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK---------------------------- 158
+N + + L M GC P+ S ++
Sbjct: 193 KNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSVYNAL 252
Query: 159 ---LCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
LCK + + A +L +MVEKG ++ L ++LC+ G++ A +M+++G
Sbjct: 253 INGLCKEHD-YKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRG 311
Query: 216 HKPS 219
P+
Sbjct: 312 CHPN 315
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 66/152 (43%), Gaps = 2/152 (1%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P+IV+YN L+D K ++E+AY + ++ + +Y +++ G G P A +
Sbjct: 491 PNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQL 550
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMV--EKGLSPNATTYNLFFRVF 125
+ +M G PD N I YC + A+ ++D + + P+ +Y
Sbjct: 551 VGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGL 610
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV 157
SN L RM+ G +P+ + L+
Sbjct: 611 CRSNCREDGVILLERMISAGIVPSIATWSVLI 642
Score = 43.5 bits (101), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMR--DEDISPDVISYTSIIGGLGLVGQPD 62
G PD ++ N +I YCK + E+A ++++ + PDVISYT++I GL +
Sbjct: 558 GKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCRE 617
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLR 97
+L+ M G P A ++ I + + +R
Sbjct: 618 DGVILLERMISAGIVPSIATWSVLINCFILDDIVR 652
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 42/211 (19%), Positives = 85/211 (40%), Gaps = 27/211 (12%)
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAK-----------------RLRDASGLMDE 105
K DV+K +++ C P A + +I N + K ++ L+ +
Sbjct: 42 KELDVVKRLRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQ 101
Query: 106 MVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEK 165
M +G + + V+ + ++ R+ GC P+ + ++ + +
Sbjct: 102 MKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENR 161
Query: 166 VEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR 225
+++ ++ DM GF + +VL LC K+ A+K +EM KG P VS+
Sbjct: 162 IQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTT 221
Query: 226 IKALM----------ELANKQEALQNLSNKM 246
+ + M ELA + E + ++ N +
Sbjct: 222 VISSMCEVGLVKEGRELAERFEPVVSVYNAL 252
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 57/131 (43%), Gaps = 2/131 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV+ +YN L+ C A ++V KM + SPD I+ II G+ ++A
Sbjct: 523 GVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERA 582
Query: 65 RDVLKEMK--EYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
+L + PD +Y I C + D L++ M+ G+ P+ T+++
Sbjct: 583 AQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLI 642
Query: 123 RVFYWSNDLRS 133
F + +R+
Sbjct: 643 NCFILDDIVRA 653
>gi|326517954|dbj|BAK07229.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 549
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 121/242 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G KP +++Y LI+ YC ++ + Y I+ +MR + P+VI+YT ++ LG G+
Sbjct: 290 MEEHGFKPSVITYTSLIEAYCMEKDFQTVYAILNEMRSKGCPPNVITYTIVMHALGKAGR 349
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A D+ +++ GC PDA+ YN+ I A RL DA+ ++D+M G+ P T+N
Sbjct: 350 TQEALDIFDKVRGDGCAPDASFYNSLIYILGRAGRLEDANSVVDKMRMTGVRPTVATFNT 409
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ + +M C P+ ++ L+KLC +++ +++ L M K
Sbjct: 410 LISAACDHSQAENALKMLVKMEEQSCKPDIKTYTPLLKLCCKRQWIKVLRFLICHMFRKD 469
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+L LC GK ++ EM+ KG P + +F + ++ AN A +
Sbjct: 470 ITPDFSTYTLLVTWLCRNGKPAQSCLFLEEMVLKGFAPKKETFDLVAEKLDKANLHSAKK 529
Query: 241 NL 242
+
Sbjct: 530 KI 531
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 106/218 (48%), Gaps = 1/218 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV D + N L+D CK+R V++A +++R + PD S+ +++ G
Sbjct: 221 MDQFGVVKDTTAMNVLLDTLCKERSVKRARGAFQELRGS-VPPDESSFNTLVHGWCKARM 279
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++ARD++KEM+E+G P Y + I YC+ K + +++EM KG PN TY +
Sbjct: 280 MNEARDMMKEMEEHGFKPSVITYTSLIEAYCMEKDFQTVYAILNEMRSKGCPPNVITYTI 339
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + +++ ++ G GC P+ L+ + R ++E A + + M G
Sbjct: 340 VMHALGKAGRTQEALDIFDKVRGDGCAPDASFYNSLIYILGRAGRLEDANSVVDKMRMTG 399
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
+ + L CD + A K ++M E+ KP
Sbjct: 400 VRPTVATFNTLISAACDHSQAENALKMLVKMEEQSCKP 437
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/273 (18%), Positives = 107/273 (39%), Gaps = 35/273 (12%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G + SYN ++D+ K +Q + + ++ +M + + + T ++ L + A
Sbjct: 155 GYRHSADSYNSMVDILGKFKQFDLMWGLISQMDEIGGLVSLATMTKVMRRLAGASRWTDA 214
Query: 65 RDVLKEMKEYGCY----------------------------------PDAAAYNAAIRNY 90
D +M ++G PD +++N + +
Sbjct: 215 IDAFNKMDQFGVVKDTTAMNVLLDTLCKERSVKRARGAFQELRGSVPPDESSFNTLVHGW 274
Query: 91 CIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNT 150
C A+ + +A +M EM E G P+ TY + D ++ + + M GC PN
Sbjct: 275 CKARMMNEARDMMKEMEEHGFKPSVITYTSLIEAYCMEKDFQTVYAILNEMRSKGCPPNV 334
Query: 151 QSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLE 210
+ ++ + + + AL +++ + G + L +L G+L +A +
Sbjct: 335 ITYTIVMHALGKAGRTQEALDIFDKVRGDGCAPDASFYNSLIYILGRAGRLEDANSVVDK 394
Query: 211 MIEKGHKPSQVSFRR-IKALMELANKQEALQNL 242
M G +P+ +F I A + + + AL+ L
Sbjct: 395 MRMTGVRPTVATFNTLISAACDHSQAENALKML 427
>gi|357143144|ref|XP_003572818.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Brachypodium distachyon]
Length = 496
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 122/247 (49%), Gaps = 12/247 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMR-----DEDISPDVISYTSIIGGL 55
M E G+ P +YN ++ + + Q++ A+ +M+ DE+ PDV+SYT+II GL
Sbjct: 230 MAESGIAPTKTTYNVILKGFFRAGQLQHAWNFFLQMKKRGSKDENCKPDVVSYTTIIHGL 289
Query: 56 GLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNA 115
G+ GQ DKAR + EM + GC P A YNA I+ C + DA + D+M+ K PN
Sbjct: 290 GVAGQLDKARKLFDEMSKEGCPPTIATYNALIQVICKKGNVEDAVTVFDDMIRKDYIPNV 349
Query: 116 TTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWND 175
TY + R + + L RM GC P Q+ L++ + +++ AL L+
Sbjct: 350 VTYTVLIRGLCHVGKIDRAMKLMERMKNEGCEPVVQTYNVLIRYSFEEGEMDKALHLFER 409
Query: 176 MVE-----KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI-KAL 229
M + +Y +V +F + + A + +EM+E+G+ P + R+ L
Sbjct: 410 MSKGEECLPNQDTYNIVISAMF-VRKRAEDMAIAARMVMEMVERGYLPRRFMLNRVLNGL 468
Query: 230 MELANKQ 236
M N+Q
Sbjct: 469 MLTGNQQ 475
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 93/192 (48%), Gaps = 6/192 (3%)
Query: 37 RDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRL 96
R ++ D+ + S++ LG KA +++ + E PD YN +C K
Sbjct: 162 RSHRVAQDLPLFNSLLDALGKSRHASKAASLVRAL-ERRFPPDVVTYNTLADGWCRVKDT 220
Query: 97 RDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG-----CLPNTQ 151
A L+ +M E G++P TTYN+ + F+ + L+ +WN + +M G C P+
Sbjct: 221 SRALDLLRQMAESGIAPTKTTYNVILKGFFRAGQLQHAWNFFLQMKKRGSKDENCKPDVV 280
Query: 152 SCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEM 211
S ++ +++ A +L+++M ++G I + L ++C G + +A F +M
Sbjct: 281 SYTTIIHGLGVAGQLDKARKLFDEMSKEGCPPTIATYNALIQVICKKGNVEDAVTVFDDM 340
Query: 212 IEKGHKPSQVSF 223
I K + P+ V++
Sbjct: 341 IRKDYIPNVVTY 352
>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 117/219 (53%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD+++Y LI+ C+D V +A K++++MRD +PDV++Y ++ G+ G+ D+A
Sbjct: 237 PDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKF 296
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L +M GC P+ +N +R+ C R DA L+ +M+ KG SP+ T+N+
Sbjct: 297 LNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCR 356
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
L + ++ +M GC PN+ S L+ +++K++ A++ MV +G I+
Sbjct: 357 KGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVT 416
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + LC GK+ +A + ++ KG P +++ +
Sbjct: 417 YNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTV 455
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 107/219 (48%), Gaps = 3/219 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PDI+ LI +C+ + KA KI+E + PDVI+Y +I G G+ + A
Sbjct: 132 GNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISGYCKAGEINNA 191
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
VL M PD YN +R+ C + +L+ A ++D M+++ P+ TY +
Sbjct: 192 LSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEA 248
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + + L M GC P+ + LV ++ +++ A++ NDM G
Sbjct: 249 TCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPN 308
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ +++ +C G+ ++AEK +M+ KG PS V+F
Sbjct: 309 VITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTF 347
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 107/224 (47%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G PD+V+YN L++ CK+ ++++A K + M P+VI++ I+ + G+
Sbjct: 265 MRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGR 324
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +L +M G P +N I C L A ++++M + G PN+ +YN
Sbjct: 325 WMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNP 384
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEK 179
F + + RM+ GC P+ + L LCK KVE A+++ N + K
Sbjct: 385 LLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCK-DGKVEDAVEILNQLSSK 443
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G ++ + + D L GK +A K EM K KP +++
Sbjct: 444 GCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITY 487
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 102/202 (50%), Gaps = 3/202 (1%)
Query: 25 QVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYN 84
++E+ +K +E M PD+I T++I G +G+ KA +L+ ++ G PD YN
Sbjct: 117 ELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYN 176
Query: 85 AAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGT 144
I YC A + +A ++D M +SP+ TYN R S L+ + + RM+
Sbjct: 177 VMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQR 233
Query: 145 GCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEA 204
C P+ + L++ R V A++L ++M ++G ++ +VL + +C G+L EA
Sbjct: 234 DCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEA 293
Query: 205 EKSFLEMIEKGHKPSQVSFRRI 226
K +M G +P+ ++ I
Sbjct: 294 IKFLNDMPSSGCQPNVITHNII 315
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 112/244 (45%), Gaps = 1/244 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P +V++N LI+ C+ + +A I+EKM P+ +SY ++ G +
Sbjct: 335 MLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKK 394
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + L+ M GCYPD YN + C ++ DA +++++ KG SP TYN
Sbjct: 395 MDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNT 454
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + L M P+T + LV R+ KV+ A++ +++ G
Sbjct: 455 VIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMG 514
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEAL 239
+ + + LC + A + MI +G KP++ S+ I+ L +EAL
Sbjct: 515 VRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEAL 574
Query: 240 QNLS 243
+ L+
Sbjct: 575 ELLN 578
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 86/181 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PDIV+YN ++ CKD +VE A +I+ ++ + SP +I+Y ++I GL G+
Sbjct: 405 MVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGK 464
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA +L EM+ PD Y++ + ++ +A E G+ PNA T+N
Sbjct: 465 TGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNS 524
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + M+ GC P S L++ + + AL+L N++ KG
Sbjct: 525 IMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEALELLNELCNKG 584
Query: 181 F 181
Sbjct: 585 L 585
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 100/216 (46%), Gaps = 2/216 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G +P+ +SYN L+ +CK++++++A + +E+M PD+++Y +++ L G+
Sbjct: 370 MPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGK 429
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A ++L ++ GC P YN I A + A L+DEM K L P+ TY+
Sbjct: 430 VEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSS 489
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSC-MFLVKLCKRQEKVEIALQLWNDMVEK 179
+ + + G PN + ++ LCK ++ + A+ M+ +
Sbjct: 490 LVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQ-TDRAIDFLVYMINR 548
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
G +L + L G EA + E+ KG
Sbjct: 549 GCKPTETSYTILIEGLAYEGMAKEALELLNELCNKG 584
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
MGV+P+ V++N ++ CK RQ ++A + M + P SYT +I GL G +
Sbjct: 513 MGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKE 572
Query: 64 ARDVLKEMKEYGCYPDAAAYNAA 86
A ++L E+ G ++A A
Sbjct: 573 ALELLNELCNKGLMKRSSAEQVA 595
>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 110/221 (49%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P++V+YN +I YCK +++++A+K++ M E + P++++Y +I GL VG+ ++ V
Sbjct: 236 PNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGV 295
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L EM G PD YN + YC A L EM+ GL P+ TY
Sbjct: 296 LAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCK 355
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ +L + + +M G PN + L+ ++ ++ A ++W++M+ GF I+
Sbjct: 356 AGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVT 415
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKA 228
+ L + C G++ EA M KG P VS+ I A
Sbjct: 416 YNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIA 456
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 121/241 (50%), Gaps = 15/241 (6%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P IV+YN L++ +C ++E+A ++ M + +SPDV+SY++II G +
Sbjct: 404 MIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQE 463
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + EM E G PDA Y++ I+ C +RL +A L EM+ K L P+ TY
Sbjct: 464 LDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTS 523
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQL-----WND 175
+ DL + NL+ M+ G LP+T + L+ +Q + A +L +++
Sbjct: 524 LINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDE 583
Query: 176 MVEKGFGSYILV---SDVLFDLL-------CDMGKLVEAEKSFLEMIEKGHKPSQVSFRR 225
+ G L+ SD+ F + C G + EA++ F MI++ KP++ +
Sbjct: 584 SIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNV 643
Query: 226 I 226
I
Sbjct: 644 I 644
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 113/248 (45%), Gaps = 4/248 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD V+YN L++ YCK +A + +M + PDV++YTS+I + G
Sbjct: 299 MDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGN 358
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A + +M G P+ Y + I + + +A + DEM+ G P TYN
Sbjct: 359 LNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNA 418
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEK 179
S + + L M G G P+ S + C+ QE ++ A Q+ +MVEK
Sbjct: 419 LLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQE-LDRAFQMNAEMVEK 477
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEA 238
G + L LC+ +L EA F EM+ K P + ++ I + + EA
Sbjct: 478 GVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEA 537
Query: 239 LQNLSNKM 246
L NL ++M
Sbjct: 538 L-NLHDEM 544
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 117/258 (45%), Gaps = 35/258 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ PD+V+Y LI+ CK + +A + ++M + P+ ++YTS+I G G
Sbjct: 334 MLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGF 393
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLM----------------- 103
D+A + EM G P YNA + +C++ R+ +A GL+
Sbjct: 394 MDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYST 453
Query: 104 ------------------DEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
EMVEKG+SP+A TY+ + L + +L+ M+
Sbjct: 454 IIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKS 513
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
LP+ + L+ ++ + AL L ++M++KGF + +VL + L + EA+
Sbjct: 514 LLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAK 573
Query: 206 KSFLEMIEKGHKPSQVSF 223
+ L++ P+ +++
Sbjct: 574 RLLLKLFYDESIPNGITY 591
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 105/228 (46%), Gaps = 3/228 (1%)
Query: 2 REM---GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLV 58
REM GV ++ SYN LI +C +E + E+M P+V++Y ++IG +
Sbjct: 192 REMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKL 251
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
+ D+A +L+ M G P+ YN I C R+ + SG++ EM KG +P+ TY
Sbjct: 252 KRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTY 311
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
N + + + L+ M+ G P+ + L+ + + A++ ++ M
Sbjct: 312 NTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHV 371
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+G + L + G + EA + + EMI G P+ V++ +
Sbjct: 372 RGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNAL 419
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 100/223 (44%), Gaps = 1/223 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQ-VEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
G P ++SYN ++D + R+ V A K+ +M +S +V SY +I G G +
Sbjct: 162 GFMPGVLSYNAILDSIVRCRKPVIFAEKVYREMIASGVSLNVFSYNILIRGFCAAGNLEM 221
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
+EM+ C P+ YN I YC KR+ +A L+ M +GL PN TYN+
Sbjct: 222 GLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVIN 281
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
+ + + M G P+ + LV + AL L ++M+ G
Sbjct: 282 GLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPP 341
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ L + +C G L A + F +M +G +P+ V++ +
Sbjct: 342 DVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSL 384
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 86/208 (41%), Gaps = 50/208 (24%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E GV PD ++Y+ LI C+ R++ +A + ++M ++ + PD +YTS+I G G
Sbjct: 474 MVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGD 533
Query: 61 PDKARDVLKEMKEYGCYPDAAAYN------------------------------------ 84
++A ++ EM + G PD YN
Sbjct: 534 LNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDT 593
Query: 85 --------------AAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSND 130
A I+ +C+ + +A + + M+++ PN YN+ +
Sbjct: 594 LIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGN 653
Query: 131 LRSSWNLYCRMMGTGCLPNTQSCMFLVK 158
+ + LY M+ G +P+T + + LVK
Sbjct: 654 VHKAHKLYKEMVDFGFIPHTVTIIALVK 681
>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 777
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 128/262 (48%), Gaps = 37/262 (14%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++GV P++V+YN +I CK+ ++++A++ EKM E + P +++Y +I GL + +
Sbjct: 223 MEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVKLER 282
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A +LKEM + G P+ YN I YC + A + D+M+ G+SPN+ T N
Sbjct: 283 FDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNS 342
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTG---------------CL------------------ 147
+ + SN + + +L M+ G CL
Sbjct: 343 LIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRN 402
Query: 148 --PNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEA 204
PN LV LC+ ++ E A++LW ++EKGF + + S+ L LC+ G EA
Sbjct: 403 FKPNDGLLTLLVSGLCQNGKQSE-AIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEA 461
Query: 205 EKSFLEMIEKGHKPSQVSFRRI 226
K EM+E+G +S+ +
Sbjct: 462 AKLLKEMLERGLVLDSISYNTL 483
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 127/263 (48%), Gaps = 4/263 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+ D +SYN LI CK+ +VE+ +K+ E+M I PD+ +Y ++ GL +G+
Sbjct: 468 MLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGK 527
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A + E K+ G +PDA Y I YC A R+ + L EMV + NA Y
Sbjct: 528 IEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGT 587
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
R + + ++R ++ L M G + + L+ V+ A QL ++M ++G
Sbjct: 588 LIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEG 647
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEAL 239
++ L C +G++ + + EM P+++++ I +L N + A
Sbjct: 648 LSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAA 707
Query: 240 QNLSNKMALFGPSMIPKREEYLA 262
+ L N+MA G ++P Y A
Sbjct: 708 K-LLNEMAQKG--IVPDAVTYNA 727
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 101/224 (45%), Gaps = 20/224 (8%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M M ++ + V Y LI YC++ + +A+++ + MR I +Y+S+I GL +G
Sbjct: 573 MVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGL 632
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A +L EM++ G P+ Y A I YC ++ ++ EM + PN TY +
Sbjct: 633 VDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTI 692
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+++++ L M G +P+ + L ++ K+E AL++ + M G
Sbjct: 693 MINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGG 752
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
I + D+ ++ +I+ HKP VS R
Sbjct: 753 ----ISLDDI----------------TYTTLIDGWHKPLTVSSR 776
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 97/222 (43%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ P + + N L+ K +V+ +Y++ + M ++PDV +++++ G+ D A
Sbjct: 157 GLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCTGGRVDDA 216
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++ ++M++ G P+ YN I C RL +A ++M ++ + P+ TY +
Sbjct: 217 IELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLING 276
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + M G PN L+ R + ALQ+ +DM+ G
Sbjct: 277 LVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPN 336
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + L C ++ AE EM+ G +Q +F +
Sbjct: 337 SVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSV 378
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/220 (20%), Positives = 99/220 (45%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
KP+ L+ C++ + +A ++ ++ ++ + + ++ ++I GL G ++A
Sbjct: 404 KPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAK 463
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
+LKEM E G D+ +YN I C ++ + L +EMV +G+ P+ TYN+
Sbjct: 464 LLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLC 523
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+ + L+ G P+ + ++ + +VE +L+ +MV +
Sbjct: 524 NMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAV 583
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
V L C+ G + EA + +M +G + ++ +
Sbjct: 584 VYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSL 623
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 96/221 (43%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E G + V+ N LI C+ E+A K++++M + + D ISY ++I G+ +
Sbjct: 435 EKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVE 494
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
+ + +EM G PD YN + C ++ +A GL E + G P+A TY +
Sbjct: 495 EGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMI 554
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
+ +N + L+ M+ N L++ + A +L +DM +G
Sbjct: 555 DGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIP 614
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
L L ++G + A + EM ++G P+ V +
Sbjct: 615 QTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCY 655
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 111/273 (40%), Gaps = 38/273 (13%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSII------------ 52
G+ P+ V+ N LI YCK Q+E A ++E+M + ++TS+I
Sbjct: 332 GISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSA 391
Query: 53 -----------------------GGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRN 89
GL G+ +A ++ + E G + NA I
Sbjct: 392 LLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHG 451
Query: 90 YCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPN 149
C A +A+ L+ EM+E+GL ++ +YN + + L M+ G P+
Sbjct: 452 LCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPD 511
Query: 150 TQS-CMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSF 208
+ M L LC K+E A LW++ + G ++ D C ++ E EK F
Sbjct: 512 MYTYNMLLHGLCN-MGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLF 570
Query: 209 LEMIE-KGHKPSQVSFRRIKALMELANKQEALQ 240
EM+ K + + V I+A E N +EA +
Sbjct: 571 QEMVTMKIEQNAVVYGTLIRAYCENGNMREAFR 603
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/238 (20%), Positives = 99/238 (41%), Gaps = 3/238 (1%)
Query: 16 LIDVYC---KDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMK 72
LI VY K +++ + ++ + P + + ++ L + + V M
Sbjct: 130 LIHVYSTQFKHLGFGVVFELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMC 189
Query: 73 EYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLR 132
G PD ++ + +C R+ DA L +M + G++PN TYN + L
Sbjct: 190 HCGVTPDVYLFSTMVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLD 249
Query: 133 SSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLF 192
++ +M P+ + L+ + E+ + A + +M ++G+ +V + L
Sbjct: 250 EAFQFKEKMEKERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLI 309
Query: 193 DLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFG 250
D C +G + A + +MI G P+ V+ + +N+ E ++L +M G
Sbjct: 310 DGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGG 367
>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
Length = 683
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 118/242 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + + P++V+YN +I CK + V+KA +++ M + PD ++Y SI+ G GQ
Sbjct: 114 MLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQ 173
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
P +A LK+M+ G PD YN+ + C R +A + D M ++GL P TTY
Sbjct: 174 PKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEITTYGT 233
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + L L M+ G PN LV +QEKVE A+ +++ M ++G
Sbjct: 234 LLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQG 293
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ + +LC G++ +A F +MI++G P + + + + NK E +
Sbjct: 294 LNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAE 353
Query: 241 NL 242
L
Sbjct: 354 EL 355
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 112/226 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV PD ++YN ++ +C Q ++A ++KMR + + PDV++Y S++ L G+
Sbjct: 149 MVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGR 208
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR + M + G P+ Y ++ Y L + GL+D MV G+ PN +++
Sbjct: 209 CTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSI 268
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + ++ +M G PN + ++ + + +VE A+ + M+++G
Sbjct: 269 LVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEG 328
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+V + L LC K AE+ LEM+++G + + F I
Sbjct: 329 LSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSI 374
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 122/253 (48%), Gaps = 6/253 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR GV+PD+V+YN L+D CK+ + +A KI + M + P++ +Y +++ G G
Sbjct: 184 MRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGA 243
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ +L M G +P+ ++ + Y +++ +A + +M ++GL+PNA TY
Sbjct: 244 LVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGA 303
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNT---QSCMFLVKLCKRQEKVEIALQLWNDMV 177
+ S + + + +M+ G P S + + C + E+ E +L +M+
Sbjct: 304 VIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAE---ELILEML 360
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQE 237
++G + + + D C G+++E+EK F M+ G KP +++ + LA K +
Sbjct: 361 DRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMD 420
Query: 238 ALQNLSNKMALFG 250
L M G
Sbjct: 421 EATKLLASMVSVG 433
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 108/217 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G+ P+ V+Y +I + CK +VE A E+M DE +SP I Y S+I GL +
Sbjct: 289 MRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNK 348
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A +++ EM + G + +N+ I ++C R+ ++ L D MV G+ P+ TY+
Sbjct: 349 WERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYST 408
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + + L M+ G P+ + L+ + +++ AL L+ +M G
Sbjct: 409 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSG 468
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHK 217
I+ +++ L + A++ ++ + + G +
Sbjct: 469 VSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQ 505
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 99/219 (45%), Gaps = 4/219 (1%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDE--DISPDVISYTSIIGGLGLVGQPDKAR 65
PD+ SYN L++ C + + ++A +++ M D+ D PDV+SY+++I G G DK
Sbjct: 49 PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDKTY 108
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
EM + P+ YN+ I C A+ + A ++ MV+ G+ P+ TYN F
Sbjct: 109 STYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGF 168
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSY 184
S + + +M G P+ + L+ LCK E A ++++ M ++G
Sbjct: 169 CSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTE-ARKIFDSMTKRGLKPE 227
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I L G LVE M+ G P+ F
Sbjct: 228 ITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVF 266
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 64/123 (52%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +GVKPDI++Y+ LID YC ++++A K++ M + PD ++Y+++I G + +
Sbjct: 394 MVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISR 453
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A + +EM+ G PD YN ++ +R A L + + G +TYN+
Sbjct: 454 MKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNI 513
Query: 121 FFR 123
Sbjct: 514 ILH 516
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 101/252 (40%), Gaps = 43/252 (17%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G+KPD V+Y+ LI+ YCK +++ A + +M +SPD+I+Y I+ GL +
Sbjct: 429 MVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRR 488
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASG------LMDEMVE------ 108
A+++ + + G + + YN + C K DA LMD +E
Sbjct: 489 TAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNI 548
Query: 109 -----------------------KGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
GL PN TY L L L+ M G
Sbjct: 549 MIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNG 608
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGK----- 200
C ++ F+V+ ++ ++ A + + EK F + + DLL GK
Sbjct: 609 CTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSG-GKYQEYH 667
Query: 201 --LVEAEKSFLE 210
L E KSF+E
Sbjct: 668 RFLPEKYKSFIE 679
>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 568
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 120/226 (53%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E GV P++ +YNC+++ +CKD + + A+K+ ++MR+ +S ++++Y ++IGGL +
Sbjct: 259 MQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMK 318
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A V+ +MK G P+ YN I +C +L A L ++ +GLSP+ TYN+
Sbjct: 319 ANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNI 378
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F D + + M G P+ + L+ R + +E A+QL + M E G
Sbjct: 379 LVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELG 438
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ VL C G++ EA + F M+ K +P++V + +
Sbjct: 439 LTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTM 484
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 121/247 (48%), Gaps = 2/247 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MRE GV +IV+YN LI C++ + +A K++++M+ + I+P++I+Y ++I G VG+
Sbjct: 294 MRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGK 353
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA + +++K G P YN + +C A ++ EM E+G+ P+ TY +
Sbjct: 354 LGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTI 413
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
F +++ + L M G P+ + L+ C + + E A +L+ MV K
Sbjct: 414 LIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNE-ASRLFKLMVAK 472
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
++ + + C G A + F EM EK P+ S+R + ++ K +
Sbjct: 473 KLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEA 532
Query: 240 QNLSNKM 246
+ L KM
Sbjct: 533 EGLVEKM 539
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 114/241 (47%), Gaps = 1/241 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+RE G P++V Y LID CK ++EKA + +M + + +YT +I GL G
Sbjct: 189 LREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGI 248
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ ++ ++M+E G +P+ YN + +C R +DA L DEM E+G+S N TYN
Sbjct: 249 KKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNT 308
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + +M G PN + L+ K+ AL L D+ +G
Sbjct: 309 LIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRG 368
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEAL 239
++ ++L C G A K EM E+G KPS++++ I + N ++A+
Sbjct: 369 LSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAI 428
Query: 240 Q 240
Q
Sbjct: 429 Q 429
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 77/166 (46%), Gaps = 1/166 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+KP ++Y LID + + +EKA ++ M + ++PDV +Y+ +I G + GQ
Sbjct: 399 MEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQ 458
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A + K M P+ YN + YC A L EM EK L PN +Y
Sbjct: 459 MNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRY 518
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKV 166
V + + L +M+ TG P + S + L+ K V
Sbjct: 519 MIEVLCKERKSKEAEGLVEKMIDTGIDP-SDSILNLISRAKNDSHV 563
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 88/185 (47%), Gaps = 4/185 (2%)
Query: 44 DVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLM 103
DV S+ +I G G+ +K+ D+L E++E+G P+ Y I C + A L
Sbjct: 162 DVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLF 221
Query: 104 DEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPN--TQSCMFLVKLCK 161
EM + GL N TY + + + + + +Y +M G PN T +C+ + + CK
Sbjct: 222 FEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCV-MNQHCK 280
Query: 162 RQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQV 221
+ + A +L+++M E+G I+ + L LC K EA K +M G P+ +
Sbjct: 281 -DGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLI 339
Query: 222 SFRRI 226
++ +
Sbjct: 340 TYNTL 344
Score = 43.5 bits (101), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 54/129 (41%), Gaps = 1/129 (0%)
Query: 83 YNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMM 142
Y I Y ++ L + +EMV+KG P + +N S+ W +
Sbjct: 97 YEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNESK 156
Query: 143 GTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLV 202
L + S ++K C ++E + L ++ E GF +++ L D C G++
Sbjct: 157 IKVDL-DVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIE 215
Query: 203 EAEKSFLEM 211
+A+ F EM
Sbjct: 216 KAKDLFFEM 224
>gi|22128589|gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
Length = 591
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 113/218 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + KP+ +Y +ID +CKD ++ A ++ +M+ + I PD+ +Y+++I L + Q
Sbjct: 204 MEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQ 263
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ R + EM YP+ +N+ I C ++ DA +M M+EKG+ P+ TYN+
Sbjct: 264 WENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNM 323
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + ++ M+ P+ S L+ RQ+K++ A+Q+ ++ +KG
Sbjct: 324 IIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQVCREISQKG 383
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
I+ +VL L ++G+ A+ F EM+ GH P
Sbjct: 384 LKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIP 421
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 115/223 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + + P++ ++N +ID CK+ +VE A +I+ M ++ + PDVI+Y II G GL GQ
Sbjct: 274 MIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQ 333
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+AR++ M PD +YN I Y K++ +A + E+ +KGL P+ T N+
Sbjct: 334 VDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNV 393
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ +S+ N + M+ G +P+ + L+ + VE A+ ++ + +
Sbjct: 394 LLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRR 453
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ I + + D LC GKL +A +F ++ G P +++
Sbjct: 454 EDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITY 496
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 107/223 (47%), Gaps = 7/223 (3%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDI-SPDVISYTSIIGGLGLVGQPDK 63
G+ + V++ LI + +V+ A + +K+ E+I P+ + Y +++ GL G K
Sbjct: 137 GIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQK 196
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
A D+L+ M++ P+ Y I +C L A+ L++EM +K + P+ TY+
Sbjct: 197 AFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLID 256
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMF---LVKLCKRQEKVEIALQLWNDMVEKG 180
+ + L+ M+ PN C F + LCK + KVE A ++ M+EKG
Sbjct: 257 ALCKLSQWENVRTLFLEMIHLNIYPNV--CTFNSVIDGLCK-EGKVEDAEEIMRYMIEKG 313
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ +++ D G++ A + F MI K +P +S+
Sbjct: 314 VDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDIISY 356
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 65/116 (56%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
+I Y +ID CK+ +++KA+ EK+ + PDVI+YT++I G G D+A+D+L
Sbjct: 457 NIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDML 516
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++M++ GC D YN +R + + ++ + ++E+ K S A T L +
Sbjct: 517 RKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFEAATVELLMDI 572
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 62/129 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD+ ++ L+ Y K+ VE+A K+ ++ YT++I GL G+
Sbjct: 414 MLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGK 473
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA +++ G +PD Y A I YC L +A ++ +M + G + TYN+
Sbjct: 474 LDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNV 533
Query: 121 FFRVFYWSN 129
R F SN
Sbjct: 534 IVRGFLRSN 542
>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
Length = 614
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 117/225 (52%), Gaps = 7/225 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G +P++V+YN LID CK+ + ++A ++ E M+ + SP +++Y +++ GL G+
Sbjct: 105 MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 164
Query: 61 PDKARDVLKEMKEYG-------CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSP 113
++A + +EM + C P+ Y+ I C A R+ A L++ M +G SP
Sbjct: 165 LERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSP 224
Query: 114 NATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLW 173
+ TY + + + ++W + M+ GC+PN + L+ R +V AL L
Sbjct: 225 DVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALM 284
Query: 174 NDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
DM +G ++ L D LC +G++ +A +MI+KG P
Sbjct: 285 RDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTP 329
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 117/244 (47%), Gaps = 4/244 (1%)
Query: 1 MREM---GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGL 57
+REM G P++V+YN L+ C+ R+V A ++ M +P+V++Y ++I GL
Sbjct: 249 LREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCK 308
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
VG+ A +L +M + G PD YN I C A ++ ++ L+ V G+ P+ T
Sbjct: 309 VGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVT 368
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
Y+ SN L + L + GC P+ L+ + KV+ A L+ M
Sbjct: 369 YSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMA 428
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQ 236
G + ++ L D LC G++ EA M+ G PS +++ IK L +L +
Sbjct: 429 GDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLD 488
Query: 237 EALQ 240
EA++
Sbjct: 489 EAIE 492
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 117/245 (47%), Gaps = 8/245 (3%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+KPD+V+Y+ +I C+ ++++A +++ ++ PDVI Y+++I GL G+ D+A
Sbjct: 361 GIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEA 420
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
D+ + M GC D Y+ I C A R+ +A L+ MV G P+ TYN +
Sbjct: 421 FDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKG 480
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWND-----MVEK 179
N L + L M + C P+ + L+ R E+V+ A+ L +
Sbjct: 481 LCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAG 540
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
G + L D LC G++ EA F EMI+ G P +++ L+E K + L
Sbjct: 541 GTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITY---SILLEGLKKSKDL 597
Query: 240 QNLSN 244
L +
Sbjct: 598 HELRH 602
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 107/216 (49%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P++++Y+ LID CK +V +A +++E M+ SPDVI+YT ++ GL + A +V
Sbjct: 189 PNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEV 248
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L+EM + GC P+ YN+ + C A+R+ DA LM +M +G +PN TY
Sbjct: 249 LREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCK 308
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
++ + + M+ G P+ L+ + ++V+ ++ L V G ++
Sbjct: 309 VGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVT 368
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ LC +L EA + L + +G P + +
Sbjct: 369 YSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILY 404
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 104/233 (44%), Gaps = 7/233 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR + P++ + LID CK ++ A + M+ I D + YT+++ GL +
Sbjct: 35 MRSKNLVPNVFLCSILIDGLCKAKRSIDALRCFRAMQGSGIVADTVIYTALLSGLWKEKR 94
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A +L EM+++GC P+ YN+ I C A L + M SP+ TYN
Sbjct: 95 LDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNT 154
Query: 121 FFRVFYWSNDLRSSWNLYCRM-------MGTGCLPNTQSCMFLVKLCKRQEKVEIALQLW 173
+ + L + L+ M M C PN + L+ + +V A++L
Sbjct: 155 LLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELL 214
Query: 174 NDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
M +G ++ +L D LC K+ A + EM++ G P+ V++ +
Sbjct: 215 ESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSL 267
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 106/226 (46%), Gaps = 3/226 (1%)
Query: 1 MREM---GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGL 57
MR+M G P++V+Y LID CK +V+ A ++ M D+ +PD++ Y +I GL
Sbjct: 284 MRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCK 343
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
Q D++ +L+ G PD Y++ I C + RL +A L+ + +G P+
Sbjct: 344 ADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVIL 403
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
Y+ + + +++LY M G GC + + L+ + +V+ A L MV
Sbjct: 404 YSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMV 463
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G + + L LCD+ L EA + EM PS V++
Sbjct: 464 RMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTY 509
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 102/224 (45%), Gaps = 7/224 (3%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
+PD+ +Y L+ +C+ ++++A + ++MR +++ P+V + +I GL + A
Sbjct: 6 QPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALR 65
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
+ M+ G D Y A + KRL A ++ EM + G PN TYN
Sbjct: 66 CFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLC 125
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK------- 179
+N+ + L+ M C P+ + L+ R K+E A+ L+ +M+++
Sbjct: 126 KNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDD 185
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ VL D LC ++ +A + M +G P +++
Sbjct: 186 RCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITY 229
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 74/179 (41%), Gaps = 8/179 (4%)
Query: 76 CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSW 135
C PD Y A +R +C + A DEM K L PN ++ + +
Sbjct: 5 CQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDAL 64
Query: 136 NLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLL 195
+ M G+G + +T L+ ++++++ AL + ++M + G ++ + L D L
Sbjct: 65 RCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGL 124
Query: 196 CDMGKLVEAEKSFLEMIEKGHKPSQVS--------FRRIKALMELANKQEALQNLSNKM 246
C + A++ F M PS V+ FR K +A QE L S+ M
Sbjct: 125 CKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDM 183
>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680 [Vitis vinifera]
gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 112/222 (50%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G++P +VS+N LI+ YCK +++ +++ M + + PDV +Y+ +I GL GQ D A
Sbjct: 255 GLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDA 314
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ EM + G P+ + I +C+ R + +M+ KG+ P+ TYN
Sbjct: 315 NKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLING 374
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
DLR + L M G P+ + L+ C ++ +E AL++ +MV++G
Sbjct: 375 LCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELD 434
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ L C G+++EAE++ EM+E G KP ++ +
Sbjct: 435 NVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMV 476
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 101/206 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GVKPD+++YN LI+ CK + +A K+V +M + PD +YT +I G G
Sbjct: 356 MLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGD 415
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A ++ KEM + G D A+ A I +C ++ +A + EM+E G+ P+ TY +
Sbjct: 416 LESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTM 475
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F D+++ + L M G +P + L+ +Q +++ A L + M+ G
Sbjct: 476 VIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLG 535
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEK 206
+ ++L + C G + +K
Sbjct: 536 VVPDDITYNILLEGHCKHGNREDFDK 561
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 103/224 (45%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ P+ V++ LI+ +C + + +I ++M + + PDVI+Y ++I GL VG
Sbjct: 321 MCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGD 380
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A+ ++ EM + G PD Y I C L A + EMV++G+ + +
Sbjct: 381 LREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTA 440
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEK 179
F + + M+ G P+ + M + CK+ + V+ +L +M
Sbjct: 441 LISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGD-VKTGFKLLKEMQCD 499
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G ++ +VL + LC G++ A M+ G P +++
Sbjct: 500 GHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITY 543
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 94/208 (45%)
Query: 16 LIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYG 75
L D K A+ E++ D PDV + ++ L + ++A+ + E+ + G
Sbjct: 196 LFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRG 255
Query: 76 CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSW 135
P ++N I YC + L L M+E + P+ TY++ L +
Sbjct: 256 LRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDAN 315
Query: 136 NLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLL 195
L+ M G +PN + L+ + ++ ++++ M+ KG ++ + L + L
Sbjct: 316 KLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGL 375
Query: 196 CDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
C +G L EA+K +EM ++G KP + ++
Sbjct: 376 CKVGDLREAKKLVIEMTQRGLKPDKFTY 403
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 57/119 (47%), Gaps = 3/119 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+KPD +Y +I +CK V+ +K++++M+ + P V++Y ++ GL GQ
Sbjct: 461 MLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQ 520
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
A +L M G PD YN + +C D L EKGL + +Y
Sbjct: 521 MKNANMLLDAMLNLGVVPDDITYNILLEGHCKHGNREDFDKLQS---EKGLVQDYGSYT 576
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 79/171 (46%), Gaps = 1/171 (0%)
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
+E+ + G PD +N + C ++ +A L E+ ++GL P ++N + S
Sbjct: 214 EEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKS 273
Query: 129 NDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVS 188
+L + L MM P+ + L+ ++ +++ A +L+ +M ++G +
Sbjct: 274 GNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTF 333
Query: 189 DVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEA 238
L + C G+ + + +M+ KG KP +++ I L ++ + +EA
Sbjct: 334 TTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREA 384
>gi|227463004|gb|ACP39954.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227463006|gb|ACP39955.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 547
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 128/248 (51%), Gaps = 3/248 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G +PD+V+Y LI YCK ++ + A ++ +M ++ P Y ++I GLG +
Sbjct: 287 MKYDGFEPDVVTYGILISAYCKAKKYDAAIELFHEMEAKNCKPTPHVYCTLINGLGSEKR 346
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + + K G P+A YN+ + YC + R+ DA ++DEM + PN+ TY++
Sbjct: 347 LSEALEFFERFKSCGFTPEAPTYNSLVGAYCWSMRIDDAFQVIDEMRKHSAGPNSRTYDI 406
Query: 121 FFRVFYWSNDLRSSWNLYCRMMG-TGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ ++ + +M GC P + +V++ +++V++A Q+W+ M K
Sbjct: 407 ILHHLIKARRTNEAYFRFQKMSNEPGCEPTVSTYEIIVRMFCNEDRVDLAKQVWDQMKAK 466
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIK-ALMELANKQEA 238
G + + L LC KL EA K F EM++ G +P F +K AL++ EA
Sbjct: 467 GVLPGMHMYSDLITSLCHKNKLGEACKYFQEMLDAGIRPPAKMFSNLKQALLDEGKNDEA 526
Query: 239 LQNLSNKM 246
L NL+ K+
Sbjct: 527 L-NLARKI 533
Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 89/249 (35%), Gaps = 39/249 (15%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G K + +N L+D CK R VEKA K+ +KM+
Sbjct: 217 MEEFGFKLETSDFNRLLDTLCKSRHVEKANKVFDKMK----------------------- 253
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
K R V PD +Y + + L + EM G P+ TY +
Sbjct: 254 --KRRFV----------PDIKSYTILLEGWGKEHNLLRLDEVYLEMKYDGFEPDVVTYGI 301
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + ++ L+ M C P L+ ++++ AL+ + G
Sbjct: 302 LISAYCKAKKYDAAIELFHEMEAKNCKPTPHVYCTLINGLGSEKRLSEALEFFERFKSCG 361
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI-KALMELANKQEA- 238
F + L C ++ +A + EM + P+ ++ I L++ EA
Sbjct: 362 FTPEAPTYNSLVGAYCWSMRIDDAFQVIDEMRKHSAGPNSRTYDIILHHLIKARRTNEAY 421
Query: 239 --LQNLSNK 245
Q +SN+
Sbjct: 422 FRFQKMSNE 430
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/173 (20%), Positives = 72/173 (41%), Gaps = 1/173 (0%)
Query: 47 SYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEM 106
SY ++I LG + Q R ++ EMK + + R + A+++ +A + M
Sbjct: 159 SYNALIEALGKIKQFKLIRSLVNEMKSRKLL-NKDTFALISRRHARARKVEEAIEAFERM 217
Query: 107 VEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKV 166
E G + +N S + + ++ +M +P+ +S L++ ++ +
Sbjct: 218 EEFGFKLETSDFNRLLDTLCKSRHVEKANKVFDKMKKRRFVPDIKSYTILLEGWGKEHNL 277
Query: 167 EIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
+++ +M GF ++ +L C K A + F EM K KP+
Sbjct: 278 LRLDEVYLEMKYDGFEPDVVTYGILISAYCKAKKYDAAIELFHEMEAKNCKPT 330
>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
Length = 559
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 112/222 (50%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G++P +VS+N LI+ YCK +++ +++ M + + PDV +Y+ +I GL GQ D A
Sbjct: 255 GLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDA 314
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ EM + G P+ + I +C+ R + +M+ KG+ P+ TYN
Sbjct: 315 NKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLING 374
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
DLR + L M G P+ + L+ C ++ +E AL++ +MV++G
Sbjct: 375 LCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELD 434
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ L C G+++EAE++ EM+E G KP ++ +
Sbjct: 435 NVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMV 476
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 99/195 (50%), Gaps = 4/195 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GVKPD+++YN LI+ CK + +A K+V +M + PD +YT +I G G
Sbjct: 356 MLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGD 415
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A ++ KEM + G D A+ A I +C ++ +A + EM+E G+ P+ TY +
Sbjct: 416 LESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTM 475
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F D+++ + L M G +P + L+ +Q +++ A L + M+ G
Sbjct: 476 VIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLG 535
Query: 181 FGSYILVSDVLFDLL 195
++ D+ +++L
Sbjct: 536 ----VVPDDITYNIL 546
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 103/224 (45%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ P+ V++ LI+ +C + + +I ++M + + PDVI+Y ++I GL VG
Sbjct: 321 MCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGD 380
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A+ ++ EM + G PD Y I C L A + EMV++G+ + +
Sbjct: 381 LREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTA 440
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEK 179
F + + M+ G P+ + M + CK+ + V+ +L +M
Sbjct: 441 LISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGD-VKTGFKLLKEMQCD 499
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G ++ +VL + LC G++ A M+ G P +++
Sbjct: 500 GHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITY 543
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 94/208 (45%)
Query: 16 LIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYG 75
L D K A+ E++ D PDV + ++ L + ++A+ + E+ + G
Sbjct: 196 LFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRG 255
Query: 76 CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSW 135
P ++N I YC + L L M+E + P+ TY++ L +
Sbjct: 256 LRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDAN 315
Query: 136 NLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLL 195
L+ M G +PN + L+ + ++ ++++ M+ KG ++ + L + L
Sbjct: 316 KLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGL 375
Query: 196 CDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
C +G L EA+K +EM ++G KP + ++
Sbjct: 376 CKVGDLREAKKLVIEMTQRGLKPDKFTY 403
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 79/171 (46%), Gaps = 1/171 (0%)
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
+E+ + G PD +N + C ++ +A L E+ ++GL P ++N + S
Sbjct: 214 EEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKS 273
Query: 129 NDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVS 188
+L + L MM P+ + L+ ++ +++ A +L+ +M ++G +
Sbjct: 274 GNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTF 333
Query: 189 DVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEA 238
L + C G+ + + +M+ KG KP +++ I L ++ + +EA
Sbjct: 334 TTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREA 384
>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
Length = 553
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 125/236 (52%), Gaps = 1/236 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD+++Y LI+ CK+ V +A K++++MR++ PDV++Y +I G+ G+ D+A
Sbjct: 192 PDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKF 251
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L M YGC P+ +N +R+ C R DA L+ +M+ KG SP+ T+N+
Sbjct: 252 LNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCR 311
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
L + ++ +M GC PN+ S L+ +++K++ A++ + MV +G I+
Sbjct: 312 QGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVT 371
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNL 242
+ L LC GK+ A + ++ KG P +++ I L ++ + A++ L
Sbjct: 372 YNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLL 427
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 111/224 (49%), Gaps = 5/224 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+ + G PD+++YN LI YCK +++ A +++++M +++PDV++Y +I+ L G+
Sbjct: 118 LEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGK 174
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A +VL + CYPD Y I C + A L+DEM KG P+ TYN+
Sbjct: 175 LKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNV 234
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
L + M GC PN + +++ +C ++ A +L +DM+ K
Sbjct: 235 LINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMD-AEKLLSDMLRK 293
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G ++ ++L + LC G L A +M G P+ +S+
Sbjct: 294 GCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSY 337
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 109/224 (48%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G KPD+V+YN LI+ CK+ ++++A K + M P+VI++ I+ + G+
Sbjct: 220 MRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGR 279
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +L +M GC P +N I C L A ++++M G +PN+ +YN
Sbjct: 280 WMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNP 339
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEK 179
F + + M+ GC P+ + L LCK KV++A+++ N + K
Sbjct: 340 LLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCK-DGKVDVAVEILNQLSSK 398
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G ++ + + D L +GK A K EM KG KP +++
Sbjct: 399 GCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITY 442
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 103/216 (47%), Gaps = 3/216 (1%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PDI+ LI +C+ + +KA ++E + PDVI+Y +I G G+ D A V
Sbjct: 90 PDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQV 149
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L M PD YN +R C + +L+ A ++D ++K P+ TY +
Sbjct: 150 LDRMN---VAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCK 206
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ + + L M G P+ + L+ ++ +++ A++ N+M G ++
Sbjct: 207 ESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVIT 266
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+++ +C G+ ++AEK +M+ KG PS V+F
Sbjct: 267 HNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTF 302
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 102/205 (49%), Gaps = 3/205 (1%)
Query: 22 KDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAA 81
++ ++E +K +E M PD+I TS+I G +G+ KA V++ +++ G PD
Sbjct: 69 RNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVI 128
Query: 82 AYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRM 141
YN I YC + + +A ++D M ++P+ TYN R S L+ + + R
Sbjct: 129 TYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQ 185
Query: 142 MGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKL 201
+ C P+ + L++ ++ V A++L ++M KG ++ +VL + +C G+L
Sbjct: 186 LQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRL 245
Query: 202 VEAEKSFLEMIEKGHKPSQVSFRRI 226
EA K M G +P+ ++ I
Sbjct: 246 DEAIKFLNNMPSYGCQPNVITHNII 270
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PDIV+YN L+ CKD +V+ A +I+ ++ + SP +I+Y ++I GL VG+
Sbjct: 360 MVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGK 419
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A +L EM+ G PD Y++ + ++ +A ++ G+ PNA TYN
Sbjct: 420 TERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNS 479
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
S + + M+ C P + L++ + + AL L N++ +G
Sbjct: 480 IMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRG 539
Query: 181 F 181
Sbjct: 540 L 540
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 99/223 (44%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P +V++N LI+ C+ + +A I+EKM +P+ +SY ++ G +
Sbjct: 290 MLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKK 349
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + L M GCYPD YN + C ++ A +++++ KG SP TYN
Sbjct: 350 MDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNT 409
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L M G P+ + LV R+ KV+ A++ ++D+ G
Sbjct: 410 VIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLG 469
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + + LC + A MI K KP++ ++
Sbjct: 470 IRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATY 512
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 78/155 (50%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G P +++YN +ID K + E+A K++++MR + + PD+I+Y+S++ GL G+ D+A
Sbjct: 399 GCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEA 458
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+++ G P+A YN+ + C +++ A + M+ K P TY +
Sbjct: 459 IKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEG 518
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKL 159
+ + + +L + G + + + VK+
Sbjct: 519 IAYEGLAKEALDLLNELCSRGLVKKSSAEQVAVKM 553
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 45/85 (52%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
+G++P+ ++YN ++ CK RQ ++A + M + P +YT +I G+ G +
Sbjct: 468 LGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKE 527
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIR 88
A D+L E+ G ++A A++
Sbjct: 528 ALDLLNELCSRGLVKKSSAEQVAVK 552
>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
Length = 796
Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 117/228 (51%), Gaps = 4/228 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ P++V+Y +ID CK + V++A + ++M D+ + P++++YT +I G +GQ
Sbjct: 230 MTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQ 289
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ +LKEM +G PD Y + C + +A L D M+ KG+ P+ + Y +
Sbjct: 290 WKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGI 349
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEI--ALQLWNDMVE 178
+ L + M+G G PN +F + C +K I A+ ++N M +
Sbjct: 350 ILHGYATKGALSEMHSFLDLMVGNGISPNHY--IFNIVFCAFAKKAMIGEAMDIFNKMRQ 407
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+G ++ L D LC +G++ +AE F +MI +G P+ V F +
Sbjct: 408 QGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSL 455
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 108/226 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV+P+IV+Y CLI Y Q ++ +++++M + PD +Y ++ L G+
Sbjct: 265 MIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGK 324
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR + M G PD + Y + Y L + +D MV G+SPN +N+
Sbjct: 325 CTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNI 384
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F F + + +++ +M G PN + L+ + +V+ A +N M+ +G
Sbjct: 385 VFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEG 444
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
I+V L LC + K +A + F EM+ +G P+ V F I
Sbjct: 445 VAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTI 490
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 111/228 (48%), Gaps = 7/228 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDI---SPDVISYTSIIGGLGL 57
M E+G P++VSYN L+ +C + + E+A +++ M D + P+++SY ++I G
Sbjct: 157 MSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVINGFFT 216
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
GQ DKA ++ +M + G P+ Y I C A+ + A G+ +M++KG+ PN T
Sbjct: 217 EGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVT 276
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDM 176
Y + + + M G P+ + L+ LCK+ + E A +L++ M
Sbjct: 277 YTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTE-ARKLFDSM 335
Query: 177 VEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLE-MIEKGHKPSQVSF 223
+ KG + + ++ G L E SFL+ M+ G P+ F
Sbjct: 336 IRKGIKPDVSIYGIILHGYATKGALSEMH-SFLDLMVGNGISPNHYIF 382
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 106/226 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ P++V +N ++ C + +V KA ++++ M PD+ISY ++I G LVG+
Sbjct: 475 MVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGK 534
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A +L M G P+ YN + YC R+ DA + EM+ G++P TYN
Sbjct: 535 TDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNT 594
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + LY M+ +G + + ++ + V+ AL+++ + K
Sbjct: 595 ILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKD 654
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
I+ +++ L G+ +A F + G P ++R I
Sbjct: 655 LQVDIITFNIMIGALLKDGRKEDAMNLFATISANGLVPDVTTYRLI 700
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 110/226 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G+ P++V+Y LID CK +V+ A +M +E ++P+++ +TS++ GL + +
Sbjct: 405 MRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDK 464
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA ++ EM G +P+ +N + N C R+ A L+D M G P+ +YN
Sbjct: 465 WEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNA 524
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
R + L M+ G PN + L+ R +++ A ++ +M+ G
Sbjct: 525 LIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNG 584
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ + + L + EA++ +L MI G + S ++ I
Sbjct: 585 ITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNII 630
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 118/237 (49%), Gaps = 1/237 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV P+IV + L+ C + EKA ++ +M ++ I P+V+ + +I+ L G+ KA
Sbjct: 444 GVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKA 503
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ ++ M+ G PD +YNA IR +C+ + +AS L+D M+ GL PN TYN
Sbjct: 504 QRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHG 563
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + +++++ M+ G P + ++ + + A +L+ +M+ G
Sbjct: 564 YCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWS 623
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEALQ 240
I +++ + L + EA K F + K + ++F I AL++ K++A+
Sbjct: 624 IYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMN 680
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 105/254 (41%), Gaps = 42/254 (16%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEK-MRDEDISPDVISYTSIIGGLGLVGQPDKA 64
V PD+ +Y+ L+ +C+ ++E + ++ DV+ ++ GL + +A
Sbjct: 90 VAPDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGLCDAKRVGEA 149
Query: 65 RDV-LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVE---KGLSPNATTYNL 120
V L+ M E GC P+ +YN ++ +C R +A L+ M + + PN +YN
Sbjct: 150 MGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNT 209
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
F+ + ++NL+ M G PN + ++ LCK Q V+ A ++ M++K
Sbjct: 210 VINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQ-VVDRAEGVFQQMIDK 268
Query: 180 GFGSYILVSD-----------------------------------VLFDLLCDMGKLVEA 204
G I+ +L D LC GK EA
Sbjct: 269 GVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEA 328
Query: 205 EKSFLEMIEKGHKP 218
K F MI KG KP
Sbjct: 329 RKLFDSMIRKGIKP 342
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 82/193 (42%), Gaps = 35/193 (18%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G+KP+ +YN L+ YC+D +++ AY + ++M I+P V++Y +I+ GL +
Sbjct: 545 MLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRR 604
Query: 61 PDKARDVLKEM----KEYGCYPDAAAYNAAIRNYCIAKRLR------------------- 97
+A+++ M K++ Y N +N C+ + L+
Sbjct: 605 FSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNI 664
Query: 98 ------------DASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
DA L + GL P+ TTY L L ++ M +G
Sbjct: 665 MIGALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSG 724
Query: 146 CLPNTQSCMFLVK 158
C PN+ FLV+
Sbjct: 725 CAPNSLMLNFLVR 737
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 90/189 (47%), Gaps = 7/189 (3%)
Query: 41 ISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYG-CYPDAAAYNAAIRNYCIAKRLRDA 99
++PDV +Y+ ++G +G+ + + + G D N ++ C AKR+ +A
Sbjct: 90 VAPDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGLCDAKRVGEA 149
Query: 100 SG-LMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG----CLPNTQSCM 154
G L+ M E G +PN +YN + F N + L MM G C PN S
Sbjct: 150 MGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELL-HMMADGQVRSCPPNLVSYN 208
Query: 155 FLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEK 214
++ + +V+ A L+ DM ++G ++ ++ D LC + AE F +MI+K
Sbjct: 209 TVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDK 268
Query: 215 GHKPSQVSF 223
G +P+ V++
Sbjct: 269 GVRPNIVTY 277
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 57/120 (47%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
++ DI+++N +I KD + E A + + + PDV +Y I L G ++
Sbjct: 655 LQVDIITFNIMIGALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFD 714
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+ EM++ GC P++ N +R + + A + ++ EK S A+T ++ +F
Sbjct: 715 GMFSEMEKSGCAPNSLMLNFLVRRLLLRGDISRAGAYLSKIDEKNFSLEASTTSMLISLF 774
>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
sativus]
Length = 681
Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 126/252 (50%), Gaps = 12/252 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E + P++V+Y+ LI+ Y K+R+ +A ++ ++M I P+ I+Y S+I G +
Sbjct: 310 MLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNR 369
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A + M GC PD +N I YC AKR+ D + L+ EM E GL + TTYN
Sbjct: 370 LDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNT 429
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE-- 178
F DL ++ +L +M+ +G P+ +C L+ K++ AL+++ M +
Sbjct: 430 LIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 489
Query: 179 ---------KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKA 228
G + ++L L + GK +EAE+ + EM +G P+ +++ I
Sbjct: 490 MDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMING 549
Query: 229 LMELANKQEALQ 240
L + + EA Q
Sbjct: 550 LCKQSRLDEATQ 561
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 117/247 (47%), Gaps = 1/247 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRD-EDISPDVISYTSIIGGLGLVG 59
M E G++P+ ++Y ++D CK A ++ KM + I P+V+ Y++II GL G
Sbjct: 204 MVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDG 263
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ A ++ EM+E G +PD YN I +C + R +A L+ EM+E+ ++PN TY+
Sbjct: 264 RHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYS 323
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ + LY M+ G +PNT + ++ +Q +++ A ++ M K
Sbjct: 324 ALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATK 383
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
G + + L D C ++ + + EM E G ++ + L A
Sbjct: 384 GCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAA 443
Query: 240 QNLSNKM 246
+LS +M
Sbjct: 444 LDLSQQM 450
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 111/223 (49%), Gaps = 1/223 (0%)
Query: 1 MREMG-VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVG 59
M EM +KP++V Y+ +ID KD + A+ + +M+++ I PD+ +Y +I G G
Sbjct: 239 MEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSG 298
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ +A+ +L+EM E P+ Y+A I Y ++ +A L DEM+ +G+ PN TYN
Sbjct: 299 RWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYN 358
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
F N L ++ +++ M GC P+ + L+ ++++ +L ++M E
Sbjct: 359 SMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTET 418
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
G + + L C +G L A +MI G P V+
Sbjct: 419 GLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVT 461
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 99/216 (45%), Gaps = 5/216 (2%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
D+ S+N LI +C ++ A K+ PDV+++++++ GL + + +A D+
Sbjct: 111 DVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLF 170
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
+M C P+ + + C R+ +A L+D MVE GL PN TY
Sbjct: 171 HQM----CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKI 226
Query: 129 NDLRSSWNLYCRMMGTGCL-PNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
D S+ NL +M + PN ++ + + A L+ +M EKG +
Sbjct: 227 GDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFT 286
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + D C G+ EA++ EM+E+ P+ V++
Sbjct: 287 YNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTY 322
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 92/191 (48%), Gaps = 11/191 (5%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMR----DEDIS-------PDVISYT 49
M GV PDIV+ N L+D C + +++ A ++ + M+ D D S PDV +Y
Sbjct: 450 MISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYN 509
Query: 50 SIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEK 109
+I GL G+ +A ++ KEM G P+ Y++ I C RL +A+ + D M K
Sbjct: 510 ILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSK 569
Query: 110 GLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIA 169
SP+ T+N + + + L+C M G + + + + L+ ++ + A
Sbjct: 570 SFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGA 629
Query: 170 LQLWNDMVEKG 180
L ++ +M+ G
Sbjct: 630 LDIFQEMISSG 640
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 87/172 (50%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV+PD+ +YN LI + + +A ++ ++M I P+ I+Y+S+I GL + D+A
Sbjct: 500 GVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEA 559
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ M PD +N + YC A R+ D L EM +G+ +A TY
Sbjct: 560 TQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHG 619
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDM 176
F ++ + +++ M+ +G P+T + ++ + +E+++ A+ + D+
Sbjct: 620 FRKVGNINGALDIFQEMISSGVYPDTITIRSMLTVLWSKEELKRAVAMLEDL 671
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 119/301 (39%), Gaps = 51/301 (16%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD+ ++N LID YC ++++ +++ +M + + D +Y ++I G LVG
Sbjct: 380 MATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGD 439
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDA--------------------- 99
+ A D+ ++M G PD N + C +L+DA
Sbjct: 440 LNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFN 499
Query: 100 -------------SGLMDE------------MVEKGLSPNATTYNLFFRVFYWSNDLRSS 134
SGL++E M +G+ PN TY+ + L +
Sbjct: 500 GVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEA 559
Query: 135 WNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDL 194
++ M P+ + LV + +V+ L+L+ +M +G + + L
Sbjct: 560 TQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHG 619
Query: 195 LCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALM----ELANKQEALQNLSNKMAL-F 249
+G + A F EMI G P ++ R + ++ EL L++L M L F
Sbjct: 620 FRKVGNINGALDIFQEMISSGVYPDTITIRSMLTVLWSKEELKRAVAMLEDLQMSMDLSF 679
Query: 250 G 250
G
Sbjct: 680 G 680
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 94/224 (41%), Gaps = 5/224 (2%)
Query: 24 RQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAY 83
+ +E A + M P VI + ++G + + +PD + ++M+ D ++
Sbjct: 56 KGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSF 115
Query: 84 NAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMG 143
N I+ +C +L A ++ + G P+ T++ + + + +L+ +M
Sbjct: 116 NILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQM-- 173
Query: 144 TGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVE 203
C PN + L+ R+ +V A+ L + MVE G + + D +C +G V
Sbjct: 174 --CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVS 231
Query: 204 AEKSFLEMIEKGH-KPSQVSFRRIKALMELANKQEALQNLSNKM 246
A +M E H KP+ V + I + + NL +M
Sbjct: 232 ALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEM 275
>gi|15223927|ref|NP_177262.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169669|sp|Q9C9A2.1|PP112_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g71060, mitochondrial; Flags: Precursor
gi|12323433|gb|AAG51696.1|AC016972_15 hypothetical protein; 31939-30407 [Arabidopsis thaliana]
gi|332197036|gb|AEE35157.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 510
Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 129/246 (52%), Gaps = 3/246 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G +PD+V+Y +I+ +CK ++ E+A + +M + P + S+I GLG +
Sbjct: 258 MKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKK 317
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A + + K G +A YNA + YC ++R+ DA +DEM KG+ PNA TY++
Sbjct: 318 LNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDI 377
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ +Y M C P + +V++ +E++++A+++W++M KG
Sbjct: 378 ILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKG 434
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ + L LC KL EA + F EM++ G +P F R+K + +++ +
Sbjct: 435 VLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVT 494
Query: 241 NLSNKM 246
+L KM
Sbjct: 495 DLVVKM 500
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 42/222 (18%), Positives = 84/222 (37%), Gaps = 1/222 (0%)
Query: 20 YCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPD 79
Y + R+V++A KM + + + ++ L A+ V +MK+ PD
Sbjct: 172 YARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPD 231
Query: 80 AAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYC 139
+Y + + L + EM ++G P+ Y + + + +
Sbjct: 232 IKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFN 291
Query: 140 RMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMG 199
M C P+ L+ ++K+ AL+ + GF + L C
Sbjct: 292 EMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQ 351
Query: 200 KLVEAEKSFLEMIEKGHKPSQVSFRRI-KALMELANKQEALQ 240
++ +A K+ EM KG P+ ++ I L+ + +EA +
Sbjct: 352 RMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYE 393
>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like isoform 1 [Vitis vinifera]
Length = 610
Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 125/236 (52%), Gaps = 1/236 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD+++Y LI+ CK+ V +A K++++MR++ PDV++Y +I G+ G+ D+A
Sbjct: 249 PDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKF 308
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L M YGC P+ +N +R+ C R DA L+ +M+ KG SP+ T+N+
Sbjct: 309 LNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCR 368
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
L + ++ +M GC PN+ S L+ +++K++ A++ + MV +G I+
Sbjct: 369 QGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVT 428
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNL 242
+ L LC GK+ A + ++ KG P +++ I L ++ + A++ L
Sbjct: 429 YNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLL 484
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 111/224 (49%), Gaps = 5/224 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+ + G PD+++YN LI YCK +++ A +++++M +++PDV++Y +I+ L G+
Sbjct: 175 LEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGK 231
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A +VL + CYPD Y I C + A L+DEM KG P+ TYN+
Sbjct: 232 LKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNV 291
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
L + M GC PN + +++ +C ++ A +L +DM+ K
Sbjct: 292 LINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMD-AEKLLSDMLRK 350
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G ++ ++L + LC G L A +M G P+ +S+
Sbjct: 351 GCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSY 394
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 109/224 (48%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G KPD+V+YN LI+ CK+ ++++A K + M P+VI++ I+ + G+
Sbjct: 277 MRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGR 336
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +L +M GC P +N I C L A ++++M G +PN+ +YN
Sbjct: 337 WMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNP 396
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEK 179
F + + M+ GC P+ + L LCK KV++A+++ N + K
Sbjct: 397 LLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCK-DGKVDVAVEILNQLSSK 455
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G ++ + + D L +GK A K EM KG KP +++
Sbjct: 456 GCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITY 499
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 103/216 (47%), Gaps = 3/216 (1%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PDI+ LI +C+ + +KA ++E + PDVI+Y +I G G+ D A V
Sbjct: 147 PDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQV 206
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L M PD YN +R C + +L+ A ++D ++K P+ TY +
Sbjct: 207 LDRMN---VAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCK 263
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ + + L M G P+ + L+ ++ +++ A++ N+M G ++
Sbjct: 264 ESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVIT 323
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+++ +C G+ ++AEK +M+ KG PS V+F
Sbjct: 324 HNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTF 359
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 102/205 (49%), Gaps = 3/205 (1%)
Query: 22 KDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAA 81
++ ++E +K +E M PD+I TS+I G +G+ KA V++ +++ G PD
Sbjct: 126 RNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVI 185
Query: 82 AYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRM 141
YN I YC + + +A ++D M ++P+ TYN R S L+ + + R
Sbjct: 186 TYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQ 242
Query: 142 MGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKL 201
+ C P+ + L++ ++ V A++L ++M KG ++ +VL + +C G+L
Sbjct: 243 LQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRL 302
Query: 202 VEAEKSFLEMIEKGHKPSQVSFRRI 226
EA K M G +P+ ++ I
Sbjct: 303 DEAIKFLNNMPSYGCQPNVITHNII 327
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PDIV+YN L+ CKD +V+ A +I+ ++ + SP +I+Y ++I GL VG+
Sbjct: 417 MVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGK 476
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A +L EM+ G PD Y++ + ++ +A ++ G+ PNA TYN
Sbjct: 477 TERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNS 536
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
S + + M+ C P + L++ + + AL L N++ +G
Sbjct: 537 IMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRG 596
Query: 181 F 181
Sbjct: 597 L 597
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 99/223 (44%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P +V++N LI+ C+ + +A I+EKM +P+ +SY ++ G +
Sbjct: 347 MLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKK 406
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + L M GCYPD YN + C ++ A +++++ KG SP TYN
Sbjct: 407 MDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNT 466
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L M G P+ + LV R+ KV+ A++ ++D+ G
Sbjct: 467 VIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLG 526
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + + LC + A MI K KP++ ++
Sbjct: 527 IRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATY 569
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 78/155 (50%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G P +++YN +ID K + E+A K++++MR + + PD+I+Y+S++ GL G+ D+A
Sbjct: 456 GCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEA 515
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+++ G P+A YN+ + C +++ A + M+ K P TY +
Sbjct: 516 IKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEG 575
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKL 159
+ + + +L + G + + + VK+
Sbjct: 576 IAYEGLAKEALDLLNELCSRGLVKKSSAEQVAVKM 610
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 45/85 (52%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
+G++P+ ++YN ++ CK RQ ++A + M + P +YT +I G+ G +
Sbjct: 525 LGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKE 584
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIR 88
A D+L E+ G ++A A++
Sbjct: 585 ALDLLNELCSRGLVKKSSAEQVAVK 609
>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 116/219 (52%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD+++Y LI+ C+D V A K++++MRD +PDV++Y ++ G+ G+ D+A
Sbjct: 237 PDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKF 296
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L +M GC P+ +N +R+ C R DA L+ +M+ KG SP+ T+N+
Sbjct: 297 LNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCR 356
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
L + ++ +M GC PN+ S L+ +++K++ A++ MV +G I+
Sbjct: 357 KGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVT 416
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + LC GK+ +A + ++ KG P +++ +
Sbjct: 417 YNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTV 455
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 107/219 (48%), Gaps = 3/219 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PDI+ LI +C+ + KA KI+E + PDVI+Y +I G G+ + A
Sbjct: 132 GNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNA 191
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
VL M PD YN +R+ C + +L+ A ++D M+++ P+ TY +
Sbjct: 192 LSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEA 248
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + + L M GC P+ + LV ++ +++ A++ NDM G
Sbjct: 249 TCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPN 308
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ +++ +C G+ ++AEK +M+ KG PS V+F
Sbjct: 309 VITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTF 347
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 107/224 (47%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G PD+V+YN L++ CK+ ++++A K + M P+VI++ I+ + G+
Sbjct: 265 MRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGR 324
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +L +M G P +N I C L A ++++M + G PN+ +YN
Sbjct: 325 WMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNP 384
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEK 179
F + + RM+ GC P+ + L LCK KVE A+++ N + K
Sbjct: 385 LLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCK-DGKVEDAVEILNQLSSK 443
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G ++ + + D L GK +A K EM K KP +++
Sbjct: 444 GCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITY 487
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 102/202 (50%), Gaps = 3/202 (1%)
Query: 25 QVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYN 84
++E+ +K +E M PD+I T++I G +G+ KA +L+ ++ G PD YN
Sbjct: 117 ELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYN 176
Query: 85 AAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGT 144
I YC A + +A ++D M +SP+ TYN R S L+ + + RM+
Sbjct: 177 VMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQR 233
Query: 145 GCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEA 204
C P+ + L++ R V A++L ++M ++G ++ +VL + +C G+L EA
Sbjct: 234 DCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEA 293
Query: 205 EKSFLEMIEKGHKPSQVSFRRI 226
K +M G +P+ ++ I
Sbjct: 294 IKFLNDMPSSGCQPNVITHNII 315
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 87/181 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PDIV+YN ++ CKD +VE A +I+ ++ + SP +I+Y ++I GL G+
Sbjct: 405 MVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGK 464
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA +L EM+ PD Y++ + ++ +A E G+ PNA T+N
Sbjct: 465 TGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNS 524
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
S + + M+ GC PN S L++ + + AL+L N++ KG
Sbjct: 525 IMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKG 584
Query: 181 F 181
Sbjct: 585 L 585
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 112/244 (45%), Gaps = 1/244 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P +V++N LI+ C+ + +A I+EKM P+ +SY ++ G +
Sbjct: 335 MLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKK 394
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + L+ M GCYPD YN + C ++ DA +++++ KG SP TYN
Sbjct: 395 MDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNT 454
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + L M P+T + LV R+ KV+ A++ +++ G
Sbjct: 455 VIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMG 514
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEAL 239
+ + + LC + A + MI +G KP++ S+ I+ L +EAL
Sbjct: 515 IRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEAL 574
Query: 240 QNLS 243
+ L+
Sbjct: 575 ELLN 578
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 76/148 (51%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G P +++YN +ID K + KA K++++MR +D+ PD I+Y+S++GGL G+ D+A
Sbjct: 444 GCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEA 503
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
E + G P+A +N+ + C +++ A + M+ +G PN T+Y +
Sbjct: 504 IKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEG 563
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQS 152
+ + + L + G + + +
Sbjct: 564 LAYEGMAKEALELLNELCNKGLMKKSSA 591
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
MG++P+ V++N ++ CK RQ ++A + M + P+ SYT +I GL G +
Sbjct: 513 MGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKE 572
Query: 64 ARDVLKEMKEYGCYPDAAAYNAA 86
A ++L E+ G ++A A
Sbjct: 573 ALELLNELCNKGLMKKSSAEQVA 595
>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Brachypodium distachyon]
Length = 692
Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 121/237 (51%), Gaps = 1/237 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P++ ++N +ID CK+ + +A ++ +M+ SPDV++Y S+I G G G+ ++ +
Sbjct: 192 PNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKL 251
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
+ EM+ GC PD YNA + +C R+ A EM +G+ N T++ F F
Sbjct: 252 VGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCK 311
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ +R + L+ +M G PN + LV + +++ AL L N+MV++G ++
Sbjct: 312 NGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVT 371
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLS 243
VL D LC GK+ EAE F M G + +++ + I N + AL LS
Sbjct: 372 YTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLS 428
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 124/256 (48%), Gaps = 2/256 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G +PD+V+YN L++ +CK ++E+AY +M+ E + +V+++++ + G
Sbjct: 255 MRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGM 314
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + +M+ G P+ Y + C A RL DA L +EMV++G+ N TY +
Sbjct: 315 VREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTV 374
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + +++ M G N L+ + E AL L ++M +KG
Sbjct: 375 LVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKG 434
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI-KALMELANKQEAL 239
+ + L LC++ KL EA+ +M E G KP+ V + I A + + EA+
Sbjct: 435 MELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAI 494
Query: 240 QNLSNKM-ALFGPSMI 254
L M + F P+++
Sbjct: 495 ALLQKMMDSGFRPNIV 510
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 116/242 (47%), Gaps = 5/242 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV ++V+Y L+D CK+ +V +A + M I + + YT++I G +
Sbjct: 360 MVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKN 419
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A +L EMK+ G D + Y A I C ++L +A L+++M E GL PN Y
Sbjct: 420 SERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTN 479
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ + + L +MM +G PN + C + LCK ++ A+ +N MV+
Sbjct: 480 IMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCK-AGSIDEAISHFNKMVDL 538
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
G + L D LC G+L +A EMI+KG V +LM+ KQ L
Sbjct: 539 GLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVV---CTSLMDGHLKQGNL 595
Query: 240 QN 241
Q+
Sbjct: 596 QD 597
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 104/219 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G+KP+ V+Y CL+D CK +++ A + +M + + +V++YT ++ GL G+
Sbjct: 325 MRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGK 384
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A DV + M+ G + Y I + + K A L+ EM +KG+ + + Y
Sbjct: 385 VAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGA 444
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
L + +L +M G PN ++ C + K A+ L M++ G
Sbjct: 445 LIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSG 504
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
F I+ L D LC G + EA F +M++ G +P+
Sbjct: 505 FRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPN 543
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 108/244 (44%), Gaps = 38/244 (15%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+KP+ V Y ++D K R+ +A +++KM D P++++Y +++ GL G
Sbjct: 465 MDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGS 524
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A +M + G P+ AY A + C RL A L+DEM++KG+S +
Sbjct: 525 IDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTS 584
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+L+ ++ L +M+ +G + L L+ G
Sbjct: 585 LMDGHLKQGNLQDAFALKAKMINSG----------------------LQLDLY------G 616
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEA- 238
+ ++ C++ + EA + EMIE G P V + I +L N +EA
Sbjct: 617 YTCFVWG-------FCNLNMIQEAREVLSEMIENGITPDAVVYNCLINKCQKLGNMEEAA 669
Query: 239 -LQN 241
LQN
Sbjct: 670 ILQN 673
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 85/176 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G +P+IV+Y L+D CK +++A KM D + P+V +YT+++ GL G+
Sbjct: 500 MMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGR 559
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA +L EM + G D + + + L+DA L +M+ GL + Y
Sbjct: 560 LDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQLDLYGYTC 619
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDM 176
F F N ++ + + M+ G P+ L+ C++ +E A L N+M
Sbjct: 620 FVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLINKCQKLGNMEEAAILQNEM 675
Score = 44.3 bits (103), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 79/185 (42%), Gaps = 14/185 (7%)
Query: 43 PDVI-SYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASG 101
P V+ + S++ GL+ D A L ++E P+ N + C+A+ +S
Sbjct: 128 PSVVDTLLSLLADRGLL---DDAVLALARVRELRVPPNTRTCNHIL--LCLARE--RSSE 180
Query: 102 LMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK--- 158
L + E+ +PN T+N+ DL + L RM GC P+ + L+
Sbjct: 181 LAWRLFEQLPAPNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYG 240
Query: 159 LCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
C E+VE +L +M G ++ + L + C G++ A F EM +G
Sbjct: 241 KCGELEEVE---KLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMA 297
Query: 219 SQVSF 223
+ V+F
Sbjct: 298 NVVTF 302
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 17/72 (23%), Positives = 38/72 (52%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G++ D+ Y C + +C +++A +++ +M + I+PD + Y +I +G
Sbjct: 605 MINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLINKCQKLGN 664
Query: 61 PDKARDVLKEMK 72
++A + EM+
Sbjct: 665 MEEAAILQNEME 676
>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Glycine max]
Length = 583
Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 118/221 (53%), Gaps = 4/221 (1%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P+ +++N LID +CKD V A E+M+ + + P++++Y S+I GL G+ D+A +
Sbjct: 271 PNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIAL 330
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
+M G P+ +NA I +C K +++A L D++ E+ L PNA T+N F
Sbjct: 331 WDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCK 390
Query: 128 SNDLRSSWNLYCRMMGTGCLPN--TQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ + + L+ M+ G PN T +C+ + LC R + V A +L N+M + +
Sbjct: 391 AGMMEEGFALHNSMLDEGIFPNVSTYNCL-IAGLC-RNQNVRAAKKLLNEMENYELKADV 448
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ ++L C G+ +AEK EM+ G KP+ V++ +
Sbjct: 449 VTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTL 489
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 119/230 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G+KP+IV++N LI+ +CK + +++A K+ + + ++D+ P+ I++ ++I G
Sbjct: 334 MVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGM 393
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++ + M + G +P+ + YN I C + +R A L++EM L + TYN+
Sbjct: 394 MEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNI 453
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + L M+ G PN + L+ + ++ AL++ M ++G
Sbjct: 454 LIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEG 513
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALM 230
+ ++ +VL C GKL +A + EM+EKG P++ ++ ++ M
Sbjct: 514 KRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTYDVVRLEM 563
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 102/216 (47%), Gaps = 9/216 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+ E + P+ +++N +ID +CK +E+ + + M DE I P+V +Y +I GL
Sbjct: 369 IAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQN 428
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A+ +L EM+ Y D YN I +C A L+ EM+ G+ PN TYN
Sbjct: 429 VRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNT 488
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ +L+++ + +M G N + L+K + K+E A +L N+M+EKG
Sbjct: 489 LMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKG 548
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGH 216
DV+ +L EK F+ IE GH
Sbjct: 549 LNPNRTTYDVV--------RLEMLEKGFIPDIE-GH 575
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 118/244 (48%), Gaps = 3/244 (1%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGL---GLVGQPD 62
++P++ ++N I+ CK ++ KA ++E ++ SP++++Y ++I G G G+
Sbjct: 196 IQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMY 255
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
+A +LKEM P+ +N I +C + + A +EM +GL PN TYN
Sbjct: 256 RADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLI 315
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
+ L + L+ +M+G G PN + L+ +++ ++ A +L++D+ E+
Sbjct: 316 NGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLV 375
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNL 242
+ + + D C G + E M+++G P+ ++ + A + A + L
Sbjct: 376 PNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKL 435
Query: 243 SNKM 246
N+M
Sbjct: 436 LNEM 439
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 108/229 (47%), Gaps = 3/229 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+++ G K + S N L+ K + + + ++M I P++ ++ I GL G+
Sbjct: 156 VQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGK 215
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYC---IAKRLRDASGLMDEMVEKGLSPNATT 117
+KA DV++++K +G P+ YN I +C A ++ A ++ EM+ + PN T
Sbjct: 216 LNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEIT 275
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
+N F ++ ++ N + M G PN + L+ K++ A+ LW+ MV
Sbjct: 276 FNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMV 335
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G I+ + L + C + EA K F ++ E+ P+ ++F +
Sbjct: 336 GLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTM 384
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 92/214 (42%), Gaps = 3/214 (1%)
Query: 16 LIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYG 75
L+ Y + ++ A ++ +++D + S ++ L + + + V KEM +
Sbjct: 136 LVLAYVTNLEIHSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRR 195
Query: 76 CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF---YWSNDLR 132
P+ +N I C A +L A +++++ G SPN TYN + +
Sbjct: 196 IQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMY 255
Query: 133 SSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLF 192
+ + M+ PN + L+ + E V A + +M +G I+ + L
Sbjct: 256 RADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLI 315
Query: 193 DLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ L + GKL EA + +M+ G KP+ V+F +
Sbjct: 316 NGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNAL 349
>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 113/222 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G +PDIV YN +ID CKDR V +A I +++ + + PDV +Y+ ++ GL Q
Sbjct: 215 MDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQ 274
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A + EM PD +N + C L +A G++ M+EKG+ PN TYN
Sbjct: 275 KEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNS 334
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ N + + ++ M+ GC+PN S L+ + ++++ A +L+++M +G
Sbjct: 335 LMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRG 394
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
+ L LC G+ EA + F +M +G P V+
Sbjct: 395 LIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVT 436
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 102/202 (50%), Gaps = 2/202 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + + PD+V++N L+D CK+ + +A I++ M ++ + P+ +Y S++ G L +
Sbjct: 285 MMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNK 344
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR V M GC P+ +YN I YC A+R+ +A L DEM +GL PN YN
Sbjct: 345 VFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNT 404
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEK 179
+ + L+ M GC P+ +C L+ LCK ++ AL+L+ M +
Sbjct: 405 LISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLG-YLDNALRLFRAMQDS 463
Query: 180 GFGSYILVSDVLFDLLCDMGKL 201
++ D+L + GK+
Sbjct: 464 CLKPNLVTYDILIRAMYKSGKI 485
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 122/259 (47%), Gaps = 4/259 (1%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
++G +PD V+++ LI+ C + + +A + ++M P++ +Y +II G +G+
Sbjct: 147 KLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKTT 206
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
A +LK+M + G PD YN I C + + +A + E+ KG+ P+ TY++
Sbjct: 207 VAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILM 266
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEKGF 181
S+ + L+ MM +P+ + LV KLCK E A + M+EKG
Sbjct: 267 HGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSE-AQGIIKIMIEKGV 325
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQN 241
+ L + C K+ EA F MI KG P+ VS+ + A + + +
Sbjct: 326 EPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARE 385
Query: 242 LSNKMALFGPSMIPKREEY 260
L ++M+ G +IP Y
Sbjct: 386 LFDEMSFRG--LIPNTFNY 402
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 112/231 (48%), Gaps = 2/231 (0%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
++ D+ +N LI+ + + ++V+ A+ ++ K+ PD ++++S+I GL + +A
Sbjct: 115 IERDVFHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAM 174
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+ EM G P+ YN I+ +C + A GL+ +M + G P+ YN
Sbjct: 175 EFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGL 234
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + +++ + G G P+ + L+ LC +K E A L+N+M+
Sbjct: 235 CKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEE-ASALFNEMMSLNIMPD 293
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANK 235
++ ++L D LC G L EA+ MIEKG +P+ ++ + L NK
Sbjct: 294 VVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNK 344
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/226 (18%), Positives = 94/226 (41%)
Query: 21 CKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDA 80
C +E A M + P ++ + ++ L + + K ++ D
Sbjct: 60 CSLTNIEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDV 119
Query: 81 AAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCR 140
+N I + +R+ A ++ ++++ G P+A T++ + + + +
Sbjct: 120 FHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDE 179
Query: 141 MMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGK 200
M+ +G PN + ++K + K +A+ L M + G I++ + + D LC
Sbjct: 180 MVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRL 239
Query: 201 LVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKM 246
+ EA F E+ KG +P ++ + + ++++E L N+M
Sbjct: 240 VSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEM 285
>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 643
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 113/223 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +GVKP++V+YN +I YC +VE A +++ M++ + PD +Y S+I G+ G+
Sbjct: 262 MENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGK 321
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A +L++MKE G P A YN I YC L A G DEMV + + P +TYNL
Sbjct: 322 LEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNL 381
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + + M +G +P++ + L+ R + A L ++M+ KG
Sbjct: 382 LIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKG 441
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ L +L ++ A+ F ++I +G P + F
Sbjct: 442 IQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMF 484
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 125/252 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + +K + ++N +I+V CK+ +++KA + M + + P+V++Y ++I G G+
Sbjct: 227 MFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGR 286
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ AR VL MK G PD+ Y + I C +L +ASG++++M E GL P A TYN
Sbjct: 287 VEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNT 346
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ DL ++ M+ LP + L+ + K++ A + DM + G
Sbjct: 347 LIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSG 406
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ ++L + C G +A EMI KG +P+ V++ + ++ N+ +A
Sbjct: 407 IVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAAD 466
Query: 241 NLSNKMALFGPS 252
+L K+ G S
Sbjct: 467 DLFEKIIREGAS 478
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 114/239 (47%), Gaps = 1/239 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ PD ++YN LI+ YC+ +KA+ + ++M + I P +++YTS+I L +
Sbjct: 402 MGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNR 461
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A D+ +++ G PD +NA I +C L A L+ EM ++ + P+ TYN
Sbjct: 462 MKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNT 521
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + L M G P+ S L+ ++ + A + ++M+ G
Sbjct: 522 LMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIG 581
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS-FRRIKALMELANKQEA 238
F +L + L LC + AE+ EM+ KG P + F I+ + ++ + EA
Sbjct: 582 FNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGIGKVDDSSEA 640
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/257 (19%), Positives = 105/257 (40%), Gaps = 3/257 (1%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
+G K IV ++ LI C+ ++ + A++ + M+++ + P + ++ +++ + Q +
Sbjct: 161 LGTKSSIV-FDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTET 219
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
+ EM +N I C +L+ A + M G+ PN TYN
Sbjct: 220 VWVLYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIH 279
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
+ + + + M G P++ + L+ + K+E A + M E G
Sbjct: 280 GYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLP 339
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLS 243
+ + L D C+ G LV+A EM+ + P+ ++ + + L K + +
Sbjct: 340 TAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMI 399
Query: 244 NKMALFGPSMIPKREEY 260
M G ++P Y
Sbjct: 400 KDMGDSG--IVPDSITY 414
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 41/66 (62%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G P +++YN LI CK++Q + A +++++M + I+PD +Y S+I G+G V
Sbjct: 577 MLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGIGKVDD 636
Query: 61 PDKARD 66
+A D
Sbjct: 637 SSEASD 642
>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
Length = 1128
Score = 120 bits (300), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 117/240 (48%), Gaps = 1/240 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G KP + +YN +ID K+ +E A + E+M+ + PD ++Y S+I G G VG+ D
Sbjct: 128 GSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDT 187
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+EMK C PD YN+ I +C + +L EM + GL PN +Y+
Sbjct: 188 VYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDA 247
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
F + ++ + Y M G +PN + LV + + A +L N+M+E G
Sbjct: 248 FCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWN 307
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLS 243
++ L D LCD ++ EAEK F +M+ G P+ S+ I ++ N AL+ L+
Sbjct: 308 VVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLN 367
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 108/224 (48%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G+KP++VSY+ L+D +CK+ +++A K MR P+ +YTS++ +G
Sbjct: 229 MKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGN 288
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A + EM E G + Y A I C A+R+++A L +MV G+ PN +YN
Sbjct: 289 LSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNA 348
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQ-SCMFLVKLCKRQEKVEIALQLWNDMVEK 179
F + ++ + L + G G P+ F+ LC EK+E A + N+M E
Sbjct: 349 LIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGL-EKIEAAKVVMNEMQEN 407
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G + L+ L D G E EM E H+ + V+F
Sbjct: 408 GIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTF 451
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 115/243 (47%), Gaps = 1/243 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ M +PD+++YN LI+ +CK ++ K + +M+ + P+V+SY++++
Sbjct: 194 MKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDM 253
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A +M+ G P+ Y + + C L DA L +EM+E G+ N TY
Sbjct: 254 MQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTA 313
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ + L+ +M+ G +PN S L+ + + ++ AL+L N++ +G
Sbjct: 314 LIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRG 373
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI-KALMELANKQEAL 239
+L+ LC + K+ A+ EM E G K + + + + A + N E L
Sbjct: 374 IQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGL 433
Query: 240 QNL 242
L
Sbjct: 434 HLL 436
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 108/262 (41%), Gaps = 2/262 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ V P S N L+ + K + + + + M P V +Y +I + G
Sbjct: 89 MKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGSKPTVFTYNIMIDCMWKEGD 148
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ AR + +EMK G PD YN+ I Y RL D +EM P+ TYN
Sbjct: 149 IEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNS 208
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F S L Y M +G PN S LV +++ ++ A++ + DM G
Sbjct: 209 LINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVG 268
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
L D C +G L +A + EM+E G + + V++ + + A + + +
Sbjct: 269 HVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAE 328
Query: 241 NLSNKMALFGPSMIPKREEYLA 262
L KM G +IP Y A
Sbjct: 329 KLFGKMVTAG--VIPNLASYNA 348
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 101/244 (41%), Gaps = 2/244 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P ++ L V +E+A + KM+ + P S ++ +G+ D +
Sbjct: 61 PGFGVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRF 120
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
K+M G P YN I + A GL +EM +GL P+ TYN +
Sbjct: 121 FKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGK 180
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
L + + M C P+ + L+ + K+ L+ + +M + G ++
Sbjct: 181 VGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVS 240
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLSNKM 246
L D C + +A K +++M GH P++ ++ + A ++ N +A + L+N+M
Sbjct: 241 YSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFR-LANEM 299
Query: 247 ALFG 250
G
Sbjct: 300 LEVG 303
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 1/120 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E G+K + + Y L+D Y K + ++E+M++ D V+++ +I GL
Sbjct: 404 MQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKL 463
Query: 61 PDKARDVLKEM-KEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
KA D M ++G P+AA Y A I C +++ A+ L ++M ++GL P+ T Y
Sbjct: 464 VSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYT 523
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 75/159 (47%), Gaps = 1/159 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKM-RDEDISPDVISYTSIIGGLGLVG 59
M+E+ + +V++ LID CK++ V KA +M D + P+ YT++I GL
Sbjct: 439 MQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKEN 498
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
Q A + ++M + G PD AY + + + +A L D+M E G+ + Y
Sbjct: 499 QVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNMLEALALRDKMAEIGMKLDLLAYT 558
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK 158
F N L+ + + M+G LP+ C+ ++K
Sbjct: 559 SLVWGFSQCNQLQKARSFLEEMIGEEILPDEVLCIGVLK 597
>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 742
Score = 120 bits (300), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 114/215 (53%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G++P++ +YN LI+ CK +E+A K++E+M PD I+YT+I+ +G+
Sbjct: 488 MSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGE 547
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA ++L+ M + G P +N + +C++ L D L+ M++KG+ PNATT+N
Sbjct: 548 MAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNS 607
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + N++R++ +Y M G +P+T + L+K + ++ A L +MVEKG
Sbjct: 608 LMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKG 667
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
F + L K EA K F EM G
Sbjct: 668 FSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHG 702
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 128/250 (51%), Gaps = 6/250 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
++ G+KP+ +YN +I CK +V +A +++ M+++ I PD + YT++I G G G
Sbjct: 313 LQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGN 372
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ EMK PD Y + I C A ++ +A L EM+ KGL P+ TY
Sbjct: 373 VSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTA 432
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+ + +++ +++L+ +M+ G PN + LV LCK E V+IA +L ++M EK
Sbjct: 433 LIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGE-VDIANELLHEMSEK 491
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIK----ALMELANK 235
G + + L + LC +G + +A K EM G P +++ I + E+A
Sbjct: 492 GLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKA 551
Query: 236 QEALQNLSNK 245
E L+ + +K
Sbjct: 552 HELLRIMLDK 561
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 124/296 (41%), Gaps = 39/296 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ + PD V Y LI + K V YK+ ++M+ + I PD ++YTS+I GL G+
Sbjct: 348 MKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGK 407
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPN------ 114
+AR + EM G PD Y A I YC A +++A L ++MVEKGL+PN
Sbjct: 408 VVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTA 467
Query: 115 -----------------------------ATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
TYN ++ + L M G
Sbjct: 468 LVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAG 527
Query: 146 CLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEA 204
P+T + ++ CK E + A +L M++KG I+ +VL + C G L +
Sbjct: 528 FFPDTITYTTIMDAYCKMGEMAK-AHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDG 586
Query: 205 EKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFGPSMIPKREEY 260
E+ M++KG P+ +F + + N A + M G ++P Y
Sbjct: 587 ERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQG--VVPDTNTY 640
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 103/197 (52%), Gaps = 3/197 (1%)
Query: 1 MREM---GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGL 57
M EM G PD ++Y ++D YCK ++ KA++++ M D+ + P ++++ ++ G +
Sbjct: 520 MEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCM 579
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
G + ++K M + G P+A +N+ ++ YCI +R + M +G+ P+ T
Sbjct: 580 SGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNT 639
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
YN+ + + +++ +W L+ M+ G S L+K +++K E A +L+ +M
Sbjct: 640 YNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMR 699
Query: 178 EKGFGSYILVSDVLFDL 194
GF + + D+ D+
Sbjct: 700 THGFIAEKEIYDIFVDV 716
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 132/301 (43%), Gaps = 41/301 (13%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E+GV + VSYN ++ + C+ +V++A+ ++ +M PDV+SY+ I+ G V Q
Sbjct: 245 EVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLG 304
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDA----------------------- 99
K +++E++ G P+ YN+ I C R+ +A
Sbjct: 305 KVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLI 364
Query: 100 SG------------LMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCL 147
SG L DEM K + P+ TY + + + L+ M+ G
Sbjct: 365 SGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLK 424
Query: 148 PNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEK 206
P+ + L+ CK E E A L N MVEKG ++ L D LC G++ A +
Sbjct: 425 PDEVTYTALIDGYCKAGEMKE-AFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANE 483
Query: 207 SFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLSNKMALFGPSMIPKREEYLAEMS 265
EM EKG +P+ ++ I L ++ N ++A++ L +M L G P Y M
Sbjct: 484 LLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVK-LMEEMDLAG--FFPDTITYTTIMD 540
Query: 266 A 266
A
Sbjct: 541 A 541
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 92/198 (46%)
Query: 26 VEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNA 85
+ A+++ + + + + +SY I+ L +G+ +A +L +M+ G PD +Y+
Sbjct: 233 IRTAFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSV 292
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
+ YC ++L LM+E+ KGL PN TYN + + + + M
Sbjct: 293 IVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQR 352
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
P+ L+ + V + +L+++M K + + LC GK+VEA
Sbjct: 353 IFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEAR 412
Query: 206 KSFLEMIEKGHKPSQVSF 223
K F EM+ KG KP +V++
Sbjct: 413 KLFSEMLSKGLKPDEVTY 430
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 60/119 (50%), Gaps = 1/119 (0%)
Query: 109 KGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSC-MFLVKLCKRQEKVE 167
K + +++FF+V + L + L+ +++ G L + SC +FL +L + +
Sbjct: 175 KDWGAHPLVFDVFFQVLVEAGLLLEAGKLFDKLLNYGVLVSVDSCNLFLARLSNSFDGIR 234
Query: 168 IALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
A +++ + E G + +++ LLC +GK+ EA ++M +G+ P VS+ I
Sbjct: 235 TAFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVI 293
>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 665
Score = 120 bits (300), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 120/223 (53%), Gaps = 5/223 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G +P++ +YN L+ CK+ +V+ A K++ +M ++ PDV+SYT++I + +G+
Sbjct: 175 MKRDGKEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGK 234
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++AR++ + P+ + YNA I +C ++++ L+ +MVEKG+ PN TY+
Sbjct: 235 VEEARELSIRFQ-----PNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYST 289
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++ + ++ +M GC PN + L+K + +V AL +WN M E+G
Sbjct: 290 VISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEG 349
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
F ++ + L LC GK+ EA +M G P+ ++
Sbjct: 350 FEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTY 392
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 127/262 (48%), Gaps = 1/262 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G +P++V+YN LI C ++ +A + KM SP+V +Y ++I G G
Sbjct: 345 MAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGD 404
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A ++ +M GC P+ Y + + C + A L+++M PN T+N
Sbjct: 405 LVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNT 464
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + S + + NL+C+M GC PN ++ ++ ++ +++ AL+L +M EKG
Sbjct: 465 FIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKG 524
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
++ + +F C++GK EA K +M+ G KP +++ + + K +
Sbjct: 525 MELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAI 584
Query: 241 NLSNKMALFGPSMIPKREEYLA 262
L +K++ G +P+ Y +
Sbjct: 585 QLLDKLSA-GGKWVPEVAAYTS 605
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 122/253 (48%), Gaps = 2/253 (0%)
Query: 2 REMGVK--PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVG 59
RE+ ++ P++ YN LI+ +C++ +V++ + ++ +M ++ I P+VI+Y+++I L +G
Sbjct: 239 RELSIRFQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIG 298
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ A V +M GC P+ + + ++ Y + R+ +A + + M E+G PN YN
Sbjct: 299 NVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYN 358
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ + ++ +M GC PN + L+ + + A ++WN M+
Sbjct: 359 TLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTN 418
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
G ++V + ++LC +A +M P+ V+F + + + E
Sbjct: 419 GCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECA 478
Query: 240 QNLSNKMALFGPS 252
NL +M +G S
Sbjct: 479 INLFCQMEQYGCS 491
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 108/247 (43%), Gaps = 10/247 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+ P++++Y+ +I VE A + KM SP+V ++TS++ G + G+
Sbjct: 275 MVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGR 334
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++ M E G P+ AYN I C ++ +A + +M G SPN +TY
Sbjct: 335 VLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGA 394
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + DL + ++ +MM GC+PN +V + R A L M
Sbjct: 395 LIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDN 454
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF----------RRIKALM 230
+ + LC G++ A F +M + G P+ ++ RIK +
Sbjct: 455 CPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEAL 514
Query: 231 ELANKQE 237
EL + E
Sbjct: 515 ELVTEME 521
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 100/230 (43%), Gaps = 6/230 (2%)
Query: 11 VSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKE 70
++Y +I+ ++ V+ ++++M+ E IS + ++I VG ++A +
Sbjct: 80 LTYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLAEQALKMFYR 139
Query: 71 MKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSND 130
++E+GC P YN + R + + M G PN TYN+ + +N
Sbjct: 140 IREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALCKNNR 199
Query: 131 LRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDV 190
+ + L M GC P+ S ++ + KVE A +L F + V +
Sbjct: 200 VDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEAREL-----SIRFQPNVSVYNA 254
Query: 191 LFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
L + C K+ E +M+EKG P+ +++ I +L + N + AL
Sbjct: 255 LINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELAL 304
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 76/164 (46%), Gaps = 36/164 (21%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G P+I +YN ++D K+ ++++A ++V +M ++ + ++++Y +I GG VG+
Sbjct: 485 MEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGK 544
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDE--------------- 105
++A +L +M G PDA YN YC+ +++ A L+D+
Sbjct: 545 FEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYT 604
Query: 106 ---------------------MVEKGLSPNATTYNLFFRVFYWS 128
M+ +G+ NA T+N R + S
Sbjct: 605 SLLWGICNQIGVEEAVLYLDKMLNEGICLNAATWNALVRGLFNS 648
>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
Length = 1023
Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 115/239 (48%), Gaps = 1/239 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G KP + +YN +ID CK+ +E A + E+M+ + PD ++Y S+I G G VG+ D
Sbjct: 128 GSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDT 187
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+EMK C PD YN I +C +L EM + GL PN +Y+
Sbjct: 188 VYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLVDA 247
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
F + ++ + Y M G +PN + LV + + A +L ++M + G
Sbjct: 248 FCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWN 307
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNL 242
++ L D LCD+ ++ EAE+ F +M+ G P+ S+ I ++ N AL+ L
Sbjct: 308 VVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELL 366
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 96/194 (49%), Gaps = 2/194 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G+KP++VSY+ L+D +CK+ +++A K MR + P+ +YTS++ +G
Sbjct: 229 MKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGN 288
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A + EM + G + Y A I C +R+++A L +MV G+ PN +Y
Sbjct: 289 LSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTA 348
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPN-TQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
F + ++ + L M G G P+ F+ LC EK+E A + N+M EK
Sbjct: 349 LIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGL-EKIEAAKVVMNEMQEK 407
Query: 180 GFGSYILVSDVLFD 193
G + + L D
Sbjct: 408 GIKANTFIYTTLMD 421
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 120/255 (47%), Gaps = 9/255 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++GV+ ++V+Y LID C ++++A ++ KM + P++ SYT++I G
Sbjct: 299 MSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKN 358
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A ++L EMK G PD Y I + C +++ A +M+EM EKG+ N Y
Sbjct: 359 MDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTT 418
Query: 121 FFRVFYWS-NDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQ---EKVEIALQLWNDM 176
++ S N L + + C+ + LCK + + ++ ++ ND
Sbjct: 419 LMDAYFKSENPSEGLHLLEEMLELDIEVTAVTFCVLIDGLCKNKLVSKAIDYFGRISNDF 478
Query: 177 VEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANK 235
G + + + D LC ++ A F +M +KG P + ++ I ++ N
Sbjct: 479 ---GLQANAAIYTAMIDGLCKEDQVEAATTLFEQMAQKGLVPDRTAYTSLIDGKLKQGNV 535
Query: 236 QEALQNLSNKMALFG 250
+AL L +KMA G
Sbjct: 536 VQALA-LRDKMAEIG 549
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 107/252 (42%), Gaps = 35/252 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G+ PD V+YN +ID Y K +++ E+M+ PDVI+Y ++I G+
Sbjct: 159 MKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGK 218
Query: 61 PDKARDVLKEMKEYGCYPDAAAYN-----------------------------------A 85
K + +EMK+ G P+ +Y+ +
Sbjct: 219 LPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTS 278
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
+ YC L DA L DEM + G+ N TY ++ + L+ +M+ G
Sbjct: 279 LVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAG 338
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
+PN S L+ + + ++ AL+L ++M +G +L+ LC + K+ A+
Sbjct: 339 VIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAK 398
Query: 206 KSFLEMIEKGHK 217
EM EKG K
Sbjct: 399 VVMNEMQEKGIK 410
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 107/263 (40%), Gaps = 4/263 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ V P S N L+ + + + + + + M P V +Y +I + G
Sbjct: 89 MKRCRVFPKTRSCNGLLHKFARLGKTDGMKRFFKDMIGAGSKPTVFTYNIMIDCMCKEGD 148
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A + +EMK G PD YN+ I Y RL D +EM P+ TYN
Sbjct: 149 IEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNT 208
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F L + M +G PN S LV +++ ++ AL+ + DM G
Sbjct: 209 LINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLG 268
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
L D C +G L +A + EM + G + + V++ I L ++ +EA
Sbjct: 269 LVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEA- 327
Query: 240 QNLSNKMALFGPSMIPKREEYLA 262
+ L KM G +IP Y A
Sbjct: 328 EELFGKMVTAG--VIPNLASYTA 348
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 104/244 (42%), Gaps = 2/244 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P ++ L V ++ E+A + KM+ + P S ++ +G+ D +
Sbjct: 61 PGFGVFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRF 120
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
K+M G P YN I C + ASGL +EM +GL P+ TYN +
Sbjct: 121 FKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGK 180
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
L + + M C P+ + L+ + K+ L+ + +M + G ++
Sbjct: 181 VGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVS 240
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLSNKM 246
L D C + +A K +++M G P++ ++ + A ++ N +A + L+++M
Sbjct: 241 YSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFR-LADEM 299
Query: 247 ALFG 250
+ G
Sbjct: 300 SQVG 303
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 1/106 (0%)
Query: 11 VSYNCLIDVYCKDRQVEKAYKIVEKM-RDEDISPDVISYTSIIGGLGLVGQPDKARDVLK 69
V++ LID CK++ V KA ++ D + + YT++I GL Q + A + +
Sbjct: 449 VTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKEDQVEAATTLFE 508
Query: 70 EMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNA 115
+M + G PD AY + I + A L D+M E G+ A
Sbjct: 509 QMAQKGLVPDRTAYTSLIDGKLKQGNVVQALALRDKMAEIGVESGA 554
>gi|357156708|ref|XP_003577549.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial-like [Brachypodium distachyon]
Length = 522
Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 116/235 (49%), Gaps = 12/235 (5%)
Query: 1 MREMGVKPDIVSYNCLIDVYCK----------DRQVEKAYKIVEKMRDEDISPDVISYTS 50
M + G++P++V+YN L++ C+ DR V A ++++MRD I PDV SY+
Sbjct: 244 MIDHGIEPNVVTYNILLNGVCRHASLHPDNRFDRTVRAAEDLLKEMRDRGIEPDVTSYSI 303
Query: 51 IIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKG 110
++ + + + + MK+ G P A Y + I+ RL DA L+ EM +G
Sbjct: 304 VLHVYSRAHKAELCLCMFRSMKDRGICPTVATYTSVIKCLASCGRLEDAERLLHEMASEG 363
Query: 111 LSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG--CLPNTQSCMFLVKLCKRQEKVEI 168
+ P+ TYN FF+ + D+ + LY +M P+ S L+ + + +
Sbjct: 364 VCPSPATYNCFFKEYRGRKDVIGALELYKKMKAPASPTAPDIHSYHILLGMFVKLNQHGT 423
Query: 169 ALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+LWNDM E G + +L C+ K EA + F+EMIEKG P +++F
Sbjct: 424 VTELWNDMCESTVGPDLDSYTLLIHGFCENEKWREACQFFMEMIEKGFLPQKITF 478
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 2/135 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRD--EDISPDVISYTSIIGGLGLV 58
M GV P +YNC Y + V A ++ +KM+ +PD+ SY ++G +
Sbjct: 359 MASEGVCPSPATYNCFFKEYRGRKDVIGALELYKKMKAPASPTAPDIHSYHILLGMFVKL 418
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
Q ++ +M E PD +Y I +C ++ R+A EM+EKG P T+
Sbjct: 419 NQHGTVTELWNDMCESTVGPDLDSYTLLIHGFCENEKWREACQFFMEMIEKGFLPQKITF 478
Query: 119 NLFFRVFYWSNDLRS 133
+ +R ++ LR+
Sbjct: 479 EILYRGLIQADMLRT 493
>gi|122236160|sp|Q0WP85.1|PP150_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g13420, mitochondrial; Flags: Precursor
gi|110738270|dbj|BAF01064.1| hypothetical protein [Arabidopsis thaliana]
Length = 509
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 127/256 (49%), Gaps = 10/256 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCK----------DRQVEKAYKIVEKMRDEDISPDVISYTS 50
M E G++P++V+YN L++ C+ +R V A K+ ++MR I PDV S++
Sbjct: 233 MIESGIEPNVVTYNVLLNGICRTASLHPEERFERNVRNAEKVFDEMRQRGIEPDVTSFSI 292
Query: 51 IIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKG 110
++ + + D +K MK G P Y + ++ C RL +A L++ MVE G
Sbjct: 293 VLHMYSRAHKAELTLDKMKLMKAKGISPTIETYTSVVKCLCSCGRLEEAEELLETMVESG 352
Query: 111 LSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIAL 170
+SP++ TYN FF+ + D + NLY +M C P+TQ+ L+ K+E
Sbjct: 353 ISPSSATYNCFFKEYKGRKDANGAMNLYRKMKNGLCKPSTQTYNVLLGTFINLGKMETVK 412
Query: 171 QLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALM 230
++W+D+ G + L LC K EA F+EMIE+G P +++F + +
Sbjct: 413 EIWDDLKASETGPDLDSYTSLVHGLCSKEKWKEACGYFVEMIERGFLPQKLTFETLYKGL 472
Query: 231 ELANKQEALQNLSNKM 246
+NK + L K+
Sbjct: 473 IQSNKMRTWRRLKKKL 488
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 79/190 (41%), Gaps = 13/190 (6%)
Query: 45 VISYTSIIGGLGLVGQPDKARDVLKEMKE-YGCYPDAAAYNAAIRNYCIAKRLRDASGLM 103
++ + ++ L G A V E KE +G D Y I +C +R+ A +
Sbjct: 173 LVEFGFLLDTLCKYGYTKMAVGVFNERKEEFGS--DEKVYTILIAGWCKLRRIDMAEKFL 230
Query: 104 DEMVEKGLSPNATTYNLFFRVF----------YWSNDLRSSWNLYCRMMGTGCLPNTQSC 153
EM+E G+ PN TYN+ + ++R++ ++ M G P+ S
Sbjct: 231 VEMIESGIEPNVVTYNVLLNGICRTASLHPEERFERNVRNAEKVFDEMRQRGIEPDVTSF 290
Query: 154 MFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIE 213
++ + R K E+ L M KG I + LC G+L EAE+ M+E
Sbjct: 291 SIVLHMYSRAHKAELTLDKMKLMKAKGISPTIETYTSVVKCLCSCGRLEEAEELLETMVE 350
Query: 214 KGHKPSQVSF 223
G PS ++
Sbjct: 351 SGISPSSATY 360
>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
Length = 798
Score = 119 bits (299), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 116/215 (53%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G++PD+VSY+ +I + CK +VE A +M E +SP++IS+TS+I GL +G+
Sbjct: 404 MRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGE 463
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
K ++ EM G +PDA N + N C R+ +A D ++ G+ PN +YN
Sbjct: 464 WKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNT 523
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + S + RM+ G P++ + L+ + +VE AL L+ +M K
Sbjct: 524 LIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKD 583
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
+ S+++ L G++V A + +++M+++G
Sbjct: 584 VKFCAITSNIILHGLFQAGRIVAARELYMKMVDRG 618
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 110/219 (50%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PD+V+Y+ LID CK + + KA I++ M D+ + P+ +Y +I G +GQ ++A
Sbjct: 233 GFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEA 292
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+LK+M G PD Y I+ YC R +A + D MV KG PN+T Y++
Sbjct: 293 VRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHG 352
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ L +L M+ G ++ L+ + V+ A+ + +M + G
Sbjct: 353 YATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPD 412
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + +LC +G++ +A F +M+ +G P+ +SF
Sbjct: 413 VVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISF 451
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 140/295 (47%), Gaps = 42/295 (14%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDE---DISPDVISYTSIIGGLGL 57
M E+G PD+ SYN LI C +++ ++A +++ M + + SP+V+SY++II G
Sbjct: 156 MPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTIIDGFFK 215
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
G+ DKA + EM G PD Y++ I C A+ + A ++ M +KG+ PN T
Sbjct: 216 EGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRT 275
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
YN+ R + L + L +M G+G P+ + + L++ + + A +++ MV
Sbjct: 276 YNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMV 335
Query: 178 EKGF-----------------GSYILVSDVL--------------FDLL----CDMGKLV 202
KG G+ I V D+L F++L G +
Sbjct: 336 RKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVD 395
Query: 203 EAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLSNKMALFG--PSMI 254
+A +F EM + G +P VS+ I L ++ ++A+ + N+M G P++I
Sbjct: 396 KAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHF-NQMVSEGLSPNII 449
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 104/226 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV P+ +YN +I YC Q+E+A ++++KM + PDV++Y +I +G+
Sbjct: 264 MFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGR 323
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR V M G P++ Y+ + Y L D L+D M+ G+ +N+
Sbjct: 324 CAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNI 383
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + + M G P+ S ++ + + +VE A+ +N MV +G
Sbjct: 384 LICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEG 443
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
I+ L LC +G+ + E+ EMI +G P + I
Sbjct: 444 LSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTI 489
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 104/226 (46%), Gaps = 4/226 (1%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIV-EKMRDEDISPDVISYTSIIGGLGLVGQP 61
+MG + V+ N LI C ++ + A +V +M + +PDV SY ++I GL + +
Sbjct: 122 KMGWRVQNVTLNQLIKGLCDGKRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKS 181
Query: 62 DKARDVLKEMKE---YGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
+A ++L M Y C P+ +Y+ I + + A L DEM+ +G P+ TY
Sbjct: 182 QEALELLLHMTADGGYNCSPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTY 241
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
+ + + + + M G +PNT++ +++ ++E A++L M
Sbjct: 242 SSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSG 301
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
G ++ +L C +G+ EA F M+ KG KP+ +
Sbjct: 302 SGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYH 347
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 105/259 (40%), Gaps = 37/259 (14%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGG------ 54
M G++PD+V+Y LI YCK + +A + + M + P+ Y ++ G
Sbjct: 299 MSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGA 358
Query: 55 -------LGLV----------------------GQPDKARDVLKEMKEYGCYPDAAAYNA 85
L L+ G DKA EM++ G PD +Y+
Sbjct: 359 LIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYST 418
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
I C R+ DA ++MV +GLSPN ++ + + L M+ G
Sbjct: 419 VIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRG 478
Query: 146 CLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEA 204
P+ ++ LCK VE A ++ ++ G ++ + L D C +GK+ E+
Sbjct: 479 IHPDAIFMNTIMDNLCKEGRVVE-AQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDES 537
Query: 205 EKSFLEMIEKGHKPSQVSF 223
K F M+ G +P ++
Sbjct: 538 IKQFDRMVSIGLRPDSWTY 556
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 85/216 (39%), Gaps = 35/216 (16%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G++PD +YN L++ Y K+ +VE A + +M +D+ I+ I+ GL G+
Sbjct: 544 MVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGR 603
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAI----RNYCIAKRLR------------------- 97
AR++ +M + G YN + N C+ + LR
Sbjct: 604 IVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNI 663
Query: 98 ------------DASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
+A L MV +G P+ TY+L + L S +L+ M G
Sbjct: 664 VINALLKVGRIDEAKSLFSAMVLRGPVPHVITYSLMIKSRIEEGLLEESDDLFLSMEKNG 723
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
C ++ +++ + V A + EK F
Sbjct: 724 CAADSHMLNVIIRRLLEKGDVRRAGTYLTKIDEKNF 759
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 54/116 (46%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
D+ ++N +I+ K ++++A + M P VI+Y+ +I G +++ D+
Sbjct: 657 DVWTFNIVINALLKVGRIDEAKSLFSAMVLRGPVPHVITYSLMIKSRIEEGLLEESDDLF 716
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
M++ GC D+ N IR +R A + ++ EK S A+T L +
Sbjct: 717 LSMEKNGCAADSHMLNVIIRRLLEKGDVRRAGTYLTKIDEKNFSVEASTAALLIPI 772
>gi|224128340|ref|XP_002320305.1| predicted protein [Populus trichocarpa]
gi|222861078|gb|EEE98620.1| predicted protein [Populus trichocarpa]
Length = 540
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/250 (31%), Positives = 120/250 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G KPDIV++N +++ + ++ A K E M+ + SPDV SYT +I L +
Sbjct: 269 MLDEGFKPDIVTHNIMLEGLLRSKKRSDAIKFFEVMKAKGPSPDVRSYTILIRDLCKQTK 328
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A EM + GC+PDAA Y + Y KR+ L+ EM EKG P+ TYN
Sbjct: 329 MKEAVGYFYEMVDSGCHPDAAVYTCLMTGYGNHKRMDMVYELLKEMKEKGCPPDGKTYNA 388
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++ + +Y +M+ G P+ S ++K R E+ +W++M +KG
Sbjct: 389 LIKLMTSQRMPDDAVRIYKKMIQNGIEPSIHSYNMIMKSYFRIRNYEMGHAVWDEMSKKG 448
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
F V L G+ EA K EMIEKG K Q+ + + A A K + L+
Sbjct: 449 FCPDDNSYTVFIGGLISQGRSEEACKYLEEMIEKGMKAPQLDYNKFAADFSRAGKPDILE 508
Query: 241 NLSNKMALFG 250
L+ KM G
Sbjct: 509 ELAQKMKFSG 518
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 100/226 (44%), Gaps = 1/226 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ + + + N L+D + + ++A + K+ +P++ +YT ++ G V
Sbjct: 200 MKNHKYRVGVETINALLDSLGRAKLGKEAQALFGKLEGR-FTPNLRTYTVLLNGWCRVKN 258
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + EM + G PD +N + +K+ DA + M KG SP+ +Y +
Sbjct: 259 LMEAGRIWNEMLDEGFKPDIVTHNIMLEGLLRSKKRSDAIKFFEVMKAKGPSPDVRSYTI 318
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
R ++ + + M+ +GC P+ L+ +++++ +L +M EKG
Sbjct: 319 LIRDLCKQTKMKEAVGYFYEMVDSGCHPDAAVYTCLMTGYGNHKRMDMVYELLKEMKEKG 378
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ L L+ +A + + +MI+ G +PS S+ I
Sbjct: 379 CPPDGKTYNALIKLMTSQRMPDDAVRIYKKMIQNGIEPSIHSYNMI 424
>gi|255564599|ref|XP_002523294.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223537382|gb|EEF39010.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 544
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 128/273 (46%), Gaps = 35/273 (12%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV P++ + N LI CK VE A K++++M + P+V++YT+I+GG G A
Sbjct: 196 GVLPNVFTCNILIKALCKKNDVESAVKVLDEMPAMGMIPNVVTYTTILGGYSSRGDMVNA 255
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
V E+ + G PDA Y + YC RL DA LMD+M E G+ PN TY +
Sbjct: 256 NKVFGELFDRGWLPDATTYTILMNGYCEQGRLADAIKLMDDMGENGVEPNEVTYGVMVEA 315
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG---- 180
+ + NL M+ +P++ C ++ + K+E A +LW M++K
Sbjct: 316 YCKEKKAGEARNLLDDMLERQYVPSSALCCKVIDVLCEAGKIEEACELWKRMLKKNCMPD 375
Query: 181 -----------------------FGSY-------ILVSDVLFDLLCDMGKLVEAEKSFLE 210
FG + +L + L +C+ G+L EA K + +
Sbjct: 376 NAIMSTLIHWLCKEGKVWEARKLFGEFERGAIPSLLTYNTLIAGMCEKGELSEAGKLWDD 435
Query: 211 MIEKGHKPSQVSFRR-IKALMELANKQEALQNL 242
M+EKG+KP+ ++ IK ++ N +E ++ L
Sbjct: 436 MMEKGYKPNAFTYNMLIKGFSKIGNAKEGIRIL 468
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 84/196 (42%), Gaps = 35/196 (17%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E GV+P+ V+Y +++ YCK+++ +A +++ M + P +I L G+
Sbjct: 297 MGENGVEPNEVTYGVMVEAYCKEKKAGEARNLLDDMLERQYVPSSALCCKVIDVLCEAGK 356
Query: 61 PDKARDVLKEMKEYGCYPDAA----------------------------------AYNAA 86
++A ++ K M + C PD A YN
Sbjct: 357 IEEACELWKRMLKKNCMPDNAIMSTLIHWLCKEGKVWEARKLFGEFERGAIPSLLTYNTL 416
Query: 87 IRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGC 146
I C L +A L D+M+EKG PNA TYN+ + F + + + M+ C
Sbjct: 417 IAGMCEKGELSEAGKLWDDMMEKGYKPNAFTYNMLIKGFSKIGNAKEGIRILEEMLDNRC 476
Query: 147 LPNTQSCMFLV-KLCK 161
+PN + L+ +LCK
Sbjct: 477 MPNKSTYAILIEELCK 492
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 92/214 (42%), Gaps = 2/214 (0%)
Query: 29 AYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMK-EYGCYPDAAAYNAAI 87
A + +++D ++ V S +++ + D + K + +YG P+ N I
Sbjct: 149 ALRTFIRIQDFNVQRSVRSLNTLLNAFVQNKRYDLVHAMFKNCRSKYGVLPNVFTCNILI 208
Query: 88 RNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCL 147
+ C + A ++DEM G+ PN TY + D+ ++ ++ + G L
Sbjct: 209 KALCKKNDVESAVKVLDEMPAMGMIPNVVTYTTILGGYSSRGDMVNANKVFGELFDRGWL 268
Query: 148 PNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKS 207
P+ + L+ Q ++ A++L +DM E G + V+ + C K EA
Sbjct: 269 PDATTYTILMNGYCEQGRLADAIKLMDDMGENGVEPNEVTYGVMVEAYCKEKKAGEARNL 328
Query: 208 FLEMIEKGHKPSQ-VSFRRIKALMELANKQEALQ 240
+M+E+ + PS + + I L E +EA +
Sbjct: 329 LDDMLERQYVPSSALCCKVIDVLCEAGKIEEACE 362
>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 550
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 122/241 (50%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ P++++Y+ L+D + K+ +V +A +I E+M I PD+++Y+S+I GL L + D+A
Sbjct: 256 ITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEAN 315
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+ M GC+PD +YN I +C AKR+ D L +M ++GL N TYN + F
Sbjct: 316 QMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGF 375
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ D+ + + +M G P+ + L+ +E AL ++ DM + I
Sbjct: 376 FQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDI 435
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNK 245
+ + +C GK+ +A F + KG KP V++ + + + Q ++ L K
Sbjct: 436 VTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTK 495
Query: 246 M 246
M
Sbjct: 496 M 496
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 113/218 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E+G +PDIV+YN +ID CK R+V A +++ + I P+V++YT+++ GL G+
Sbjct: 181 MVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGR 240
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A +L++M + P+ Y+A + + ++ +A + +EMV + P+ TY+
Sbjct: 241 WNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSS 300
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + ++ M+ GC P+ S L+ + ++VE ++L+ M ++G
Sbjct: 301 LINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRG 360
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
+ + + L +G + +A++ F +M G P
Sbjct: 361 LVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSP 398
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 127/253 (50%), Gaps = 2/253 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++G +PD V+ L++ +C+ +V A +V+KM + PD+++Y +II L +
Sbjct: 146 MLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRR 205
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A D KE+ G P+ Y A + C + R DA+ L+ +M+++ ++PN TY+
Sbjct: 206 VNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSA 265
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + + + ++ M+ P+ + L+ ++++ A Q+++ MV KG
Sbjct: 266 LLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKG 325
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
++ + L + C ++ + K F +M ++G + V++ I+ ++ + +A
Sbjct: 326 CFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKA- 384
Query: 240 QNLSNKMALFGPS 252
Q ++M FG S
Sbjct: 385 QEFFSQMDSFGVS 397
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 125/288 (43%), Gaps = 20/288 (6%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G++ D+ ++N +I+ +C QV A ++ KM PD ++ S++ G +
Sbjct: 111 MEVLGIRNDLYTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNR 170
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A ++ +M E G PD AYNA I + C +R+ DA E+ KG+ PN TY
Sbjct: 171 VSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTA 230
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
S + L M+ PN + L+ + KV A +++ +MV
Sbjct: 231 LVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMS 290
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF----------RRIKALM 230
I+ L + LC ++ EA + F M+ KG P VS+ +R++ M
Sbjct: 291 IDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGM 350
Query: 231 ELANKQEALQNLSNKM-------ALFGPSMIPKREEYLAEMSASDSFS 271
+L K ++N + F + K +E+ ++M DSF
Sbjct: 351 KLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQM---DSFG 395
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 87/184 (47%), Gaps = 6/184 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD+VSYN LI+ +CK ++VE K+ KM + + ++Y ++I G VG
Sbjct: 321 MVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGD 380
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA++ +M +G PD YN + C L A + ++M + + + TY
Sbjct: 381 VDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTT 440
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKR--QEKVEIALQLWNDMV 177
+ + + +W L+C + G P+ + + LC + Q +VE L+ M
Sbjct: 441 VIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVE---ALYTKMK 497
Query: 178 EKGF 181
++G
Sbjct: 498 QEGL 501
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 93/216 (43%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P IV +N L+ K ++ + + +KM I D+ ++ +I Q A V
Sbjct: 83 PSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSV 142
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L +M + G PD + + +C R+ DA L+D+MVE G P+ YN
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCK 202
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ + + + + + G PN + LV + A +L DM+++ ++
Sbjct: 203 TRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVIT 262
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
L D GK++EA++ F EM+ P V++
Sbjct: 263 YSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTY 298
>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
Length = 761
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 115/224 (51%), Gaps = 3/224 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PD+ ++N LID YCK ++E +I+ KM ++PDVI+Y S++ GL + +
Sbjct: 456 GYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDL 515
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ + M E GC P+ YN + C A ++ +A L+DE++ KG++P+ ++
Sbjct: 516 METFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISG 575
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIAL--QLWNDMVEKGFG 182
F + DL+ ++ L+ R MG + + + + + EK+++ + +L+ +M G
Sbjct: 576 FANNGDLKGAYQLF-RRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCA 634
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
V+ D C G K LEMIEKG PS +F R+
Sbjct: 635 PDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGRV 678
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 104/222 (46%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PD +Y LI+ C++ ++++A + + + P VI Y +I GL G +A
Sbjct: 351 GFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQA 410
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++ EM E GC D YN I C + DA+ LM++ + KG P+ T+N
Sbjct: 411 LQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDG 470
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + ++ + +M G P+ + ++ + K E ++ + MVEKG
Sbjct: 471 YCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPN 530
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ ++L + LC GK+ EA E++ KG P VSF I
Sbjct: 531 KITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATI 572
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 104/222 (46%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ ++ ++N I C+ + A +++ + E ++PDV++Y ++I GL +A
Sbjct: 246 GMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEA 305
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
L ++ G PD YN I YC L++A ++ + KG P+ TY
Sbjct: 306 EKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLING 365
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
++++ + L+ +G G P L+K ++ + ALQ+ N+M E G S
Sbjct: 366 LCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSD 425
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
I +++ + LC MG + +A + I KG+ P +F +
Sbjct: 426 IWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTL 467
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 97/208 (46%), Gaps = 2/208 (0%)
Query: 20 YCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPD 79
Y + +V++A + E+M + P V+SY +I+ L G +A V MK G PD
Sbjct: 86 YGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGIVPD 145
Query: 80 AAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYC 139
+ I+++C KR A L++ MV +G NA Y FY N ++ L+
Sbjct: 146 VYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFN 205
Query: 140 RMMGTGCLPNTQSC-MFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDM 198
M+ G P+ + L LCK+ E V+ + +L N +++KG S + ++ LC
Sbjct: 206 DMLRIGIFPDVSTFNKLLHTLCKKGE-VQESERLLNKVLKKGMCSNLFTFNIFIQGLCRK 264
Query: 199 GKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G L A +I +G P V++ +
Sbjct: 265 GMLSGAMSMLDSVIREGLTPDVVTYNTL 292
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 106/224 (47%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ +G+ PD+ ++ I +C+ ++ A +++ M + + ++Y +++ G
Sbjct: 137 MKNVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENY 196
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++ +M G +PD + +N + C ++++ L++++++KG+ N T+N+
Sbjct: 197 RVEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNI 256
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEK 179
F + L + ++ ++ G P+ + L+ LCK VE A + + +V
Sbjct: 257 FIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVE-AEKYLHKLVNG 315
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G + L D C MG L AEK I KG P + ++
Sbjct: 316 GLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTY 359
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 101/239 (42%), Gaps = 1/239 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+RE G+ PD+V+YN LI CK+ V +A K + K+ + + PD +Y ++I G +G
Sbjct: 278 IRE-GLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGM 336
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +L+ G PD Y + I C + A L + + KGL P YN+
Sbjct: 337 LQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNM 396
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + + M GC + + ++ + V A L ND + KG
Sbjct: 397 LIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKG 456
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
+ + + L D C K+ + +M G P +++ + + A K E L
Sbjct: 457 YVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDL 515
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 107/221 (48%), Gaps = 2/221 (0%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
+P ++SYN ++++ + ++A+K+ +M++ I PDV ++T I +P A
Sbjct: 108 EPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGIVPDVYTFTIRIKSFCRTKRPHSALR 167
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
+L M GC +A AY + + +A L ++M+ G+ P+ +T+N
Sbjct: 168 LLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFNDMLRIGIFPDVSTFNKLLHTLC 227
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSC-MFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+++ S L +++ G N + +F+ LC R+ + A+ + + ++ +G +
Sbjct: 228 KKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLC-RKGMLSGAMSMLDSVIREGLTPDV 286
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + L LC +VEAEK +++ G +P ++ +
Sbjct: 287 VTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTL 327
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 99/225 (44%), Gaps = 1/225 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G DI +YN +I+ CK V A ++ + PDV ++ ++I G +
Sbjct: 417 MSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLK 476
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ +L +M +G PD YN+ + A + D + MVEKG PN TYN+
Sbjct: 477 METTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNI 536
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + +L ++ G P+T S ++ ++ A QL+ M E+
Sbjct: 537 LTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQY 596
Query: 181 FGSYILVS-DVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
S+ + +++ + + L EK FLEM G P ++R
Sbjct: 597 KVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYR 641
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 82/182 (45%), Gaps = 1/182 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G P+ ++YN L + CK +V +A +V+++ ++ I+PD +S+ +II G G
Sbjct: 522 MVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGD 581
Query: 61 PDKARDVLKEMKE-YGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
A + + M E Y A YN I + L L EM G +P+ TY
Sbjct: 582 LKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYR 641
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ F + + S + M+ G +P+ + ++ Q +V A+ + + MV
Sbjct: 642 VMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGRVINCLCVQHRVHEAVDIIHFMVHN 701
Query: 180 GF 181
G
Sbjct: 702 GI 703
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 49/116 (42%), Gaps = 4/116 (3%)
Query: 2 REMG----VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGL 57
R MG V +YN +I+ + + + K+ +M +PD +Y +I G +
Sbjct: 590 RRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCI 649
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSP 113
G D L EM E G P + I C+ R+ +A ++ MV G+ P
Sbjct: 650 TGNTDSGYKFLLEMIEKGFIPSLTTFGRVINCLCVQHRVHEAVDIIHFMVHNGIVP 705
>gi|224118166|ref|XP_002317747.1| predicted protein [Populus trichocarpa]
gi|222858420|gb|EEE95967.1| predicted protein [Populus trichocarpa]
Length = 498
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 109/226 (48%), Gaps = 1/226 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV P++ S+N LI CK VE A K+ ++M + P++++YT+I+GG G A
Sbjct: 153 GVLPNVFSFNILIKALCKKNDVENALKVFDEMPTMGMIPNLVTYTTILGGFVSRGDLVNA 212
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
V E+ + G PDA Y + YC RL DA +MD M G+ PN TY +
Sbjct: 213 EKVFSEISDKGWLPDATTYTVLMVGYCKQGRLSDAIKVMDNMEYNGVEPNEVTYGVMIDA 272
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + NL M+ LP++ C ++ + KVE A LW M+EK
Sbjct: 273 YCKEKKSGEARNLIDDMLDKKFLPSSTLCCKVIDVLCEDGKVENACHLWKRMLEKNCLPD 332
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALM 230
+ L LC GK+ EA K F E E+G PS +++ + A M
Sbjct: 333 NAIMSTLIHWLCKEGKVWEARKLFDE-FEQGTIPSLMTYNTLIAGM 377
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 120/243 (49%), Gaps = 2/243 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M MG+ P++V+Y ++ + + A K+ ++ D+ PD +YT ++ G G+
Sbjct: 184 MPTMGMIPNLVTYTTILGGFVSRGDLVNAEKVFSEISDKGWLPDATTYTVLMVGYCKQGR 243
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A V+ M+ G P+ Y I YC K+ +A L+D+M++K P++T
Sbjct: 244 LSDAIKVMDNMEYNGVEPNEVTYGVMIDAYCKEKKSGEARNLIDDMLDKKFLPSSTLCCK 303
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
V + ++ +L+ RM+ CLP+ L+ ++ KV A +L+ D E+G
Sbjct: 304 VIDVLCEDGKVENACHLWKRMLEKNCLPDNAIMSTLIHWLCKEGKVWEARKLF-DEFEQG 362
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
++ + L +C+ G+L EA + + +M+EK +P+ ++ IK M+ +E +
Sbjct: 363 TIPSLMTYNTLIAGMCERGELNEAGRLWDDMVEKRCRPNAFTYNMLIKGFMKAGVVKEGV 422
Query: 240 QNL 242
+ L
Sbjct: 423 RIL 425
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 73/143 (51%), Gaps = 1/143 (0%)
Query: 16 LIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYG 75
+IDV C+D +VE A + ++M +++ PD +++I L G+ +AR + E E G
Sbjct: 304 VIDVLCEDGKVENACHLWKRMLEKNCLPDNAIMSTLIHWLCKEGKVWEARKLFDEF-EQG 362
Query: 76 CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSW 135
P YN I C L +A L D+MVEK PNA TYN+ + F + ++
Sbjct: 363 TIPSLMTYNTLIAGMCERGELNEAGRLWDDMVEKRCRPNAFTYNMLIKGFMKAGVVKEGV 422
Query: 136 NLYCRMMGTGCLPNTQSCMFLVK 158
+ M+ GCLPN + L++
Sbjct: 423 RILEEMLDNGCLPNKSTYTLLIE 445
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 85/180 (47%), Gaps = 1/180 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV+P+ V+Y +ID YCK+++ +A +++ M D+ P +I L G+
Sbjct: 254 MEYNGVEPNEVTYGVMIDAYCKEKKSGEARNLIDDMLDKKFLPSSTLCCKVIDVLCEDGK 313
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A + K M E C PD A + I C ++ +A L DE E+G P+ TYN
Sbjct: 314 VENACHLWKRMLEKNCLPDNAIMSTLIHWLCKEGKVWEARKLFDEF-EQGTIPSLMTYNT 372
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+L + L+ M+ C PN + L+K + V+ +++ +M++ G
Sbjct: 373 LIAGMCERGELNEAGRLWDDMVEKRCRPNAFTYNMLIKGFMKAGVVKEGVRILEEMLDNG 432
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 68/150 (45%), Gaps = 2/150 (1%)
Query: 73 EYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLR 132
+YG P+ ++N I+ C + +A + DEM G+ PN TY F DL
Sbjct: 151 KYGVLPNVFSFNILIKALCKKNDVENALKVFDEMPTMGMIPNLVTYTTILGGFVSRGDLV 210
Query: 133 SSWNLYCRMMGTGCLPN-TQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVL 191
++ ++ + G LP+ T + +V CK Q ++ A+++ ++M G + V+
Sbjct: 211 NAEKVFSEISDKGWLPDATTYTVLMVGYCK-QGRLSDAIKVMDNMEYNGVEPNEVTYGVM 269
Query: 192 FDLLCDMGKLVEAEKSFLEMIEKGHKPSQV 221
D C K EA +M++K PS
Sbjct: 270 IDAYCKEKKSGEARNLIDDMLDKKFLPSST 299
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 56/121 (46%), Gaps = 1/121 (0%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E G P +++YN LI C+ ++ +A ++ + M ++ P+ +Y +I G G
Sbjct: 360 EQGTIPSLMTYNTLIAGMCERGELNEAGRLWDDMVEKRCRPNAFTYNMLIKGFMKAGVVK 419
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
+ +L+EM + GC P+ + Y I + D +M M +A +++LF
Sbjct: 420 EGVRILEEMLDNGCLPNKSTYTLLIEGLQESGMEGDVDKVM-SMAMASREVDADSWDLFL 478
Query: 123 R 123
Sbjct: 479 H 479
Score = 37.7 bits (86), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 9/110 (8%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGL---GL 57
M E +P+ +YN LI + K V++ +I+E+M D P+ +YT +I GL G+
Sbjct: 393 MVEKRCRPNAFTYNMLIKGFMKAGVVKEGVRILEEMLDNGCLPNKSTYTLLIEGLQESGM 452
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMV 107
G DK + +E DA +++ + I L +G +D ++
Sbjct: 453 EGDVDKVMSMAMASREV----DADSWDLFLHK--IVGNLDCGTGALDRLL 496
>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
Length = 724
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 122/247 (49%), Gaps = 2/247 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G KP++ +Y LID +CK Q+E+A I+ +M + S + + Y ++I L G+
Sbjct: 408 MDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGK 467
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A D+ EM GC PD +N+ I C + DA L +MV +G+ N+ T+N
Sbjct: 468 IHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNT 527
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F +++ + L M+ GC + + L+K + VE L L+ +M+ KG
Sbjct: 528 LIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKG 587
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
I+ ++L + C GK+ A + +MI +G P V++ I L + QEAL
Sbjct: 588 LTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEAL 647
Query: 240 QNLSNKM 246
NL K+
Sbjct: 648 -NLFEKL 653
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 110/229 (48%), Gaps = 3/229 (1%)
Query: 1 MREM---GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGL 57
+REM G + V YN LI CK ++ +A + +M + PD+ ++ S+I GL
Sbjct: 440 LREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCR 499
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
V + + A + ++M G ++ +N I + +++A L+++M+ +G + T
Sbjct: 500 VDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEIT 559
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
YN + + + L+ M+ G P+ +C L+ KV AL+ DM+
Sbjct: 560 YNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMI 619
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+GF I+ + L + LC G++ EA F ++ +G +P +++ +
Sbjct: 620 HRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTL 668
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 107/222 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD+ +++ L++ CK A ++V M + P++ +YT +I G GQ
Sbjct: 373 MINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQ 432
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A +L+EM G + YNA I C ++ +A + EM KG P+ T+N
Sbjct: 433 LEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNS 492
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+++ + LY M+ G + N+ + L+ R+ +++ AL+L NDM+ +G
Sbjct: 493 LIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRG 552
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
+ + L LC G + + F EMI KG PS ++
Sbjct: 553 CPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIIT 594
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 116/234 (49%), Gaps = 2/234 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIV-EKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
P++V +N L++ + ++ ++ +A V +KM + PDV ++++++ GL G A +
Sbjct: 344 PNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALE 403
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
++ +M GC P+ Y I +C +L +A ++ EM+ KG S N YN
Sbjct: 404 LVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALC 463
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+ + +++ M GC P+ + L+ R +++E AL L+ DMV +G + +
Sbjct: 464 KHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSV 523
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
+ L G++ EA K +M+ +G ++++ IKAL + ++ L
Sbjct: 524 TFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGL 577
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 115/273 (42%), Gaps = 35/273 (12%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV P+ ++ ++ C +V+ A ++ M P+ + Y ++I L +
Sbjct: 201 MLSKGVSPNDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDR 260
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY-- 118
D+A +L+EM GC PD +N I +C R+ + + L+D M+ KG +PN TY
Sbjct: 261 VDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGY 320
Query: 119 -----------------------------NLFFRVFYWSNDLR-SSWNLYCRMMGTGCLP 148
N F + L ++ +Y +M+ G +P
Sbjct: 321 LMHGLCKTCRIDEAQALLSKVPGPNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVP 380
Query: 149 NTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKS 207
+ + LV LCK+ AL+L NDM KG + +L D C G+L EA
Sbjct: 381 DVFTFSTLVNGLCKKG-LFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLI 439
Query: 208 FLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
EM+ KG + V + I AL + EAL
Sbjct: 440 LREMLTKGFSLNTVGYNALISALCKHGKIHEAL 472
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 103/224 (45%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G KPDI ++N LI C+ ++E A + M E + + +++ ++I G+
Sbjct: 478 MSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGE 537
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++ +M GC D YN I+ C + GL +EM+ KGL+P+ T N+
Sbjct: 538 IQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNI 597
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
F + + ++ M+ G P+ + L+ LCKR +++ AL L+ + +
Sbjct: 598 LINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRG-RIQEALNLFEKLQAE 656
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G + + L LC G +A +E G P+ V++
Sbjct: 657 GIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTW 700
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 63/125 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ P I++ N LI+ +C +V A + + M SPD+++Y S+I GL G+
Sbjct: 583 MIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGR 642
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++ ++++ G PD+ YN I C DA L+ VE G PN T+N+
Sbjct: 643 IQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNI 702
Query: 121 FFRVF 125
F
Sbjct: 703 LVYNF 707
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 93/194 (47%), Gaps = 1/194 (0%)
Query: 31 KIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKE-YGCYPDAAAYNAAIRN 89
+++ +M++E I + I+ G G P +A +L +MK Y C P +YN +
Sbjct: 125 RLLLQMKEEGIVFRESLFILIMKYYGRAGLPGQATRLLLDMKGVYCCEPSFRSYNVVLDV 184
Query: 90 YCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPN 149
+ AS + +M+ KG+SPN T+ L + N++ ++ L M GC+PN
Sbjct: 185 LVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCVPN 244
Query: 150 TQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFL 209
+ L+ ++++V+ AL+L +M G + + + C + +++E K
Sbjct: 245 SMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVD 304
Query: 210 EMIEKGHKPSQVSF 223
MI KG P+ +++
Sbjct: 305 RMILKGFTPNDMTY 318
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 98/222 (44%), Gaps = 7/222 (3%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
+P SYN ++DV A + M + +SP+ ++ ++ L +V + D A
Sbjct: 172 EPSFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNACL 231
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
+L++M ++GC P++ Y I R+ +A L++EM G P+ T+N F
Sbjct: 232 LLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFC 291
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYI 185
N + L RM+ G PN + +L+ LCK E ++ K G +
Sbjct: 292 RLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEA-----QALLSKVPGPNV 346
Query: 186 LVSDVLFDLLCDMGKLVEAEK-SFLEMIEKGHKPSQVSFRRI 226
+ + L + G+L EA + +MI G+ P +F +
Sbjct: 347 VHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTL 388
Score = 37.4 bits (85), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 74/182 (40%), Gaps = 5/182 (2%)
Query: 48 YTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMV 107
Y +I LG +L +MKE G + + ++ Y A A+ L+ +M
Sbjct: 107 YYLLIDKLGAAAGFKVIDRLLLQMKEEGIVFRESLFILIMKYYGRAGLPGQATRLLLDM- 165
Query: 108 EKGL---SPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQE 164
KG+ P+ +YN+ V N + N++ M+ G PN + ++K
Sbjct: 166 -KGVYCCEPSFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVN 224
Query: 165 KVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
+V+ A L DM + G ++ L D L ++ EA K EM G P +F
Sbjct: 225 EVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFN 284
Query: 225 RI 226
+
Sbjct: 285 TV 286
>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
Length = 581
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 125/242 (51%), Gaps = 3/242 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E PD++ N +ID+ CK ++V+ A+K++E+M PDV++Y ++ GL
Sbjct: 283 MTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNL 342
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA ++ M + GC PD +Y+ + C ++ DA L D M+E+ L P+ T+N+
Sbjct: 343 VDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNI 402
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L + +L M LP+ +C L+ R ++ + A++L+ MVEKG
Sbjct: 403 LMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKG 462
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHK--PSQVSFRR-IKALMELANKQE 237
+ +L +++ LC GKL +A F M++ + P V++ + AL+E +
Sbjct: 463 TVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQ 522
Query: 238 AL 239
A+
Sbjct: 523 AV 524
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 121/238 (50%), Gaps = 4/238 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G +PD+V+Y+ +I CK +V +A ++VE+M ++ ++PDV +YT I+ L G+
Sbjct: 1 MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A ++ +M E GC + AYNA I C + + A L++EM KG P+ TYN
Sbjct: 61 VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWN--DMVE 178
+ + + M G P+ + L+ ++ KV A L+ DM +
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMAD 180
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQ 236
+ ++ + L D C + K EA K F ++I KG+ P V++ I L+ LA K
Sbjct: 181 RKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSI--LLGLARKS 236
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 117/260 (45%), Gaps = 37/260 (14%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G + V+YN LI+ CKD +E+AYK++E+M + PD I+Y +I+ GL +G+
Sbjct: 71 MIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLCRMGK 130
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAA---------------------------------- 86
+A+ M G PD AYN
Sbjct: 131 VSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITY 190
Query: 87 ---IRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMG 143
I +C ++ +A L +++ KG P+ TYN +++ + ++ +M+
Sbjct: 191 NTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVD 250
Query: 144 TGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVE 203
+GC PN + ++ R + L+L+ +M EK F +L+ + + D+LC K+ +
Sbjct: 251 SGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDD 310
Query: 204 AEKSFLEMIEKGHKPSQVSF 223
A K EM + G P V++
Sbjct: 311 AHKVLEEMSKIGAVPDVVTY 330
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 120/258 (46%), Gaps = 37/258 (14%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + V PD+++YN LID +C+ + ++A K+ + + + PD ++Y SI+ GL
Sbjct: 178 MADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSN 237
Query: 61 PDKARDVLKEMKEYGCYPDAAAY-----------------------------------NA 85
D+A ++ K+M + GC P+ A Y NA
Sbjct: 238 MDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNA 297
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
I C AK++ DA +++EM + G P+ TYN+ +N + + L+ M+ G
Sbjct: 298 VIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNG 357
Query: 146 CLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEA 204
C P+ S + L LCK KV A L++ M+E+ ++ ++L D LC GKL EA
Sbjct: 358 CAPDIVSYSVVLNGLCKTN-KVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEA 416
Query: 205 EKSFLEMIEKGHKPSQVS 222
+ M E P V+
Sbjct: 417 KDLLDVMSEHNVLPDGVT 434
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 94/220 (42%), Gaps = 37/220 (16%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G PDIVSY+ +++ CK +V A + ++M + + PDV+++ ++ GL G+
Sbjct: 353 MVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGK 412
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKG---------- 110
D+A+D+L M E+ PD + C KR +A L MVEKG
Sbjct: 413 LDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNI 472
Query: 111 ---------------------------LSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMG 143
SP+ TY + + + + + +M G
Sbjct: 473 VLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTG 532
Query: 144 TGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
+GC P+ + L+ ++Q + A +L M EKGF S
Sbjct: 533 SGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLS 572
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 40/72 (55%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD+V+Y L++ + +V++A ++M +PD ++Y +++ GL G+ +A +
Sbjct: 502 PDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRL 561
Query: 68 LKEMKEYGCYPD 79
+ MKE G D
Sbjct: 562 TQAMKEKGFLSD 573
Score = 37.4 bits (85), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 35/77 (45%)
Query: 176 MVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANK 235
M EKGF ++ + LC GK+ EA + EM EKG P ++ I + A K
Sbjct: 1 MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60
Query: 236 QEALQNLSNKMALFGPS 252
+ L +KM G S
Sbjct: 61 VDEADELFHKMIERGCS 77
>gi|255540805|ref|XP_002511467.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550582|gb|EEF52069.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 482
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 127/241 (52%), Gaps = 5/241 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+ P++ +YN +++ Y + Q +A+ +M+ DV++YTS+I GLG+VG+
Sbjct: 222 MVERGLTPNLTTYNIMLNGYFRAGQTNEAWGFFLEMKKRKCDIDVVTYTSVIHGLGVVGE 281
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR+V +M + G P A +NA I+ C + +A + +EMV++G PN+ TYNL
Sbjct: 282 IKRARNVFNQMVKDGVLPSVATFNALIQILCKKDSVENAILIFEEMVKRGYVPNSITYNL 341
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE-- 178
R +++ + L RM C PN Q+ L++ ++E L L+ M
Sbjct: 342 VIRGLCHVGEMQRAMELMERMEDDDCEPNVQTYNILIRYFCDAGEIEKGLDLFQKMGNGD 401
Query: 179 --KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQ 236
+Y ++ + +F + + L+ A K +EM+++G P +++F R+ + L Q
Sbjct: 402 CLPNLDTYNILINSMF-VRKNSDNLLVAGKLLVEMVDRGFLPRKLTFNRVLDGLLLTGNQ 460
Query: 237 E 237
+
Sbjct: 461 D 461
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 115/214 (53%), Gaps = 5/214 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G D+ S+N ++DV CK ++VE AY + + ++ + D +SY I+ G L+ +
Sbjct: 153 MHEYGCFQDLSSFNTILDVLCKSKRVEMAYNLFKALKGK-FKADCVSYNIIVNGWCLIKR 211
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA ++LKEM E G P+ YN + Y A + +A G EM ++ + TY
Sbjct: 212 TPKALEMLKEMVERGLTPNLTTYNIMLNGYFRAGQTNEAWGFFLEMKKRKCDIDVVTYTS 271
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+++ + N++ +M+ G LP+ + L+++ +++ VE A+ ++ +MV++G
Sbjct: 272 VIHGLGVVGEIKRARNVFNQMVKDGVLPSVATFNALIQILCKKDSVENAILIFEEMVKRG 331
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEK 214
+ + +++ LC +G++ A +E++E+
Sbjct: 332 YVPNSITYNLVIRGLCHVGEMQRA----MELMER 361
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 113/264 (42%), Gaps = 35/264 (13%)
Query: 12 SYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEM 71
S++ ID+ + R + +V +MR + P ++ I +G+P +A V M
Sbjct: 94 SFDHAIDICARLRDFRTLWFLVSRMRSCRLGPSPRTFAIIAERYAAMGKPHRAVTVFMSM 153
Query: 72 KEYGCYPDAA----------------------------------AYNAAIRNYCIAKRLR 97
EYGC+ D + +YN + +C+ KR
Sbjct: 154 HEYGCFQDLSSFNTILDVLCKSKRVEMAYNLFKALKGKFKADCVSYNIIVNGWCLIKRTP 213
Query: 98 DASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV 157
A ++ EMVE+GL+PN TTYN+ ++ + +W + M C + + ++
Sbjct: 214 KALEMLKEMVERGLTPNLTTYNIMLNGYFRAGQTNEAWGFFLEMKKRKCDIDVVTYTSVI 273
Query: 158 KLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHK 217
+++ A ++N MV+ G + + L +LC + A F EM+++G+
Sbjct: 274 HGLGVVGEIKRARNVFNQMVKDGVLPSVATFNALIQILCKKDSVENAILIFEEMVKRGYV 333
Query: 218 PSQVSFRR-IKALMELANKQEALQ 240
P+ +++ I+ L + Q A++
Sbjct: 334 PNSITYNLVIRGLCHVGEMQRAME 357
>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 602
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 123/236 (52%), Gaps = 1/236 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD+++Y LI+ C D V +A K++++MR + PDV++Y +I G+ G+ D+A
Sbjct: 241 PDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKF 300
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L M YGC P+ +N +R+ C R DA L+ +M+ KG SP+ T+N+
Sbjct: 301 LNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCR 360
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
L + ++ +M GC+PN+ S L+ +++K++ A++ MV +G I+
Sbjct: 361 KRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVT 420
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNL 242
+ L LC GK+ A + ++ KG P +++ I L ++ + A++ L
Sbjct: 421 YNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELL 476
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 113/216 (52%), Gaps = 3/216 (1%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD+++ LI +C+ + +KA +I+E + + PDVI+Y +IGG G+ DKA +V
Sbjct: 139 PDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALEV 198
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L+ M PD YN +R+ C + +L++A ++D +++ P+ TY +
Sbjct: 199 LERMS---VAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCN 255
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ + + L M GC P+ + L+ ++ +++ A++ N+M G ++
Sbjct: 256 DSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVIT 315
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+++ +C G+ ++AE+ +M+ KG PS V+F
Sbjct: 316 HNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTF 351
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 110/220 (50%), Gaps = 5/220 (2%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PD+++YN LI YCK +++KA +++E+M ++PDV++Y +I+ L G+ +A
Sbjct: 171 GAVPDVITYNVLIGGYCKSGEIDKALEVLERM---SVAPDVVTYNTILRSLCDSGKLKEA 227
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+VL + CYPD Y I C + A L+DEM +KG P+ TYN+
Sbjct: 228 MEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLING 287
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGS 183
L + M GC PN + +++ +C ++ A +L +DM+ KG
Sbjct: 288 ICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMD-AERLLSDMLRKGCSP 346
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ ++L + LC L A +M + G P+ +S+
Sbjct: 347 SVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSY 386
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 110/224 (49%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G KPD+V+YN LI+ CK+ ++++A K + M P+VI++ I+ + G+
Sbjct: 269 MRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGR 328
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +L +M GC P +N I C + L A ++++M + G PN+ +YN
Sbjct: 329 WMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNP 388
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEK 179
F + + M+ GC P+ + L LCK KV+ A+++ N + K
Sbjct: 389 LLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCK-DGKVDAAVEILNQLSSK 447
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G ++ + + D L +GK A + EM KG KP +++
Sbjct: 448 GCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITY 491
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 114/254 (44%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+ M V PD+V+YN ++ C ++++A +++++ + PDVI+YT +I
Sbjct: 199 LERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSG 258
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A +L EM++ GC PD YN I C RL +A ++ M G PN T+N+
Sbjct: 259 VGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNI 318
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
R + + L M+ GC P+ + L+ R+ + A+ + M + G
Sbjct: 319 ILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHG 378
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
L + L C K+ A + M+ +G P V++ + + K +A
Sbjct: 379 CVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAV 438
Query: 241 NLSNKMALFGPSMI 254
+ N+++ G S +
Sbjct: 439 EILNQLSSKGCSPV 452
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 103/223 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P +V++N LI+ C+ R + +A ++EKM P+ +SY ++ G +
Sbjct: 339 MLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKK 398
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + L+ M GCYPD YN + C ++ A +++++ KG SP TYN
Sbjct: 399 MDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNT 458
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L M G P+ + L++ R+ KV+ A+++++DM
Sbjct: 459 VIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLS 518
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + + LC + A M+EKG KP++ ++
Sbjct: 519 IKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATY 561
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 101/205 (49%), Gaps = 3/205 (1%)
Query: 22 KDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAA 81
++ ++E+ K +E+M + PDVI+ TS+I G G+ KA +++ ++ G PD
Sbjct: 118 RNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVI 177
Query: 82 AYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRM 141
YN I YC + + A +++ M ++P+ TYN R S L+ + + R
Sbjct: 178 TYNVLIGGYCKSGEIDKALEVLERM---SVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQ 234
Query: 142 MGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKL 201
+ C P+ + L++ V A++L ++M +KG ++ +VL + +C G+L
Sbjct: 235 LQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRL 294
Query: 202 VEAEKSFLEMIEKGHKPSQVSFRRI 226
EA K M G KP+ ++ I
Sbjct: 295 DEAIKFLNNMPSYGCKPNVITHNII 319
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 92/181 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PDIV+YN L+ CKD +V+ A +I+ ++ + SP +I+Y ++I GL VG+
Sbjct: 409 MVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGK 468
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A ++L+EM+ G PD Y+ +R ++ +A + +M + P+A TYN
Sbjct: 469 TEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNA 528
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + M+ GC P + L++ + E AL+L N++ +G
Sbjct: 529 IMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIEGIADEGLAEEALELLNELCSRG 588
Query: 181 F 181
F
Sbjct: 589 F 589
>gi|357115308|ref|XP_003559432.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Brachypodium distachyon]
Length = 570
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 121/248 (48%), Gaps = 8/248 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G P +++Y LI+ YC ++ + Y I+ +M + P+VI+YT ++ LG G+
Sbjct: 290 MEEHGFSPSVITYTSLIEAYCMEKDFQTVYAILNEMCSKGCRPNVITYTIVMHALGKAGR 349
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A DV ++K GC PDA+ YN+ I A RL DA+ + DEM G+ P +N
Sbjct: 350 TQEALDVFDKVKRDGCVPDASFYNSIIYILGRAGRLEDANSVFDEMCRTGIPPTVAIFNT 409
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK- 179
+ ++ + +M C P+ ++ L+KLC +++ ++I L M K
Sbjct: 410 MISAACDHSQAENALKILVKMEEQSCKPDIKTYTPLLKLCCKRQWMKILPFLICHMFRKD 469
Query: 180 ---GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQ 236
F +YIL L LC GK ++ EM+ KG P Q +F + ++ N
Sbjct: 470 ISPDFSTYIL----LVTWLCRNGKPAQSCLFLEEMVLKGFMPKQETFDLVMEKLDKGNLH 525
Query: 237 EALQNLSN 244
A + + +
Sbjct: 526 SAKKKIQH 533
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 120/242 (49%), Gaps = 4/242 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV D + N L+D CK++ V++A + +++R + PD S+ +++ G
Sbjct: 221 MDQFGVVRDTKAMNALLDTLCKEKSVKRARGVFQELRGV-VPPDESSFNTLVHGWCQARM 279
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++ARD +KEM+E+G P Y + I YC+ K + +++EM KG PN TY +
Sbjct: 280 LNEARDTMKEMEEHGFSPSVITYTSLIEAYCMEKDFQTVYAILNEMCSKGCRPNVITYTI 339
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + +++ ++ GC+P+ ++ + R ++E A ++++M G
Sbjct: 340 VMHALGKAGRTQEALDVFDKVKRDGCVPDASFYNSIIYILGRAGRLEDANSVFDEMCRTG 399
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ + + + CD + A K ++M E+ KP + L++L K++ ++
Sbjct: 400 IPPTVAIFNTMISAACDHSQAENALKILVKMEEQSCKP---DIKTYTPLLKLCCKRQWMK 456
Query: 241 NL 242
L
Sbjct: 457 IL 458
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/265 (19%), Positives = 103/265 (38%), Gaps = 35/265 (13%)
Query: 13 YNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMK 72
YN ++D+ K +Q + + ++ +M + + + T ++ L + A D +M
Sbjct: 163 YNLMVDILGKFKQFDLLWGLIRQMDEIGCLVSLATMTKVMRRLAGANRWTDAIDAFNKMD 222
Query: 73 EYGCY----------------------------------PDAAAYNAAIRNYCIAKRLRD 98
++G PD +++N + +C A+ L +
Sbjct: 223 QFGVVRDTKAMNALLDTLCKEKSVKRARGVFQELRGVVPPDESSFNTLVHGWCQARMLNE 282
Query: 99 ASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK 158
A M EM E G SP+ TY + D ++ + + M GC PN + ++
Sbjct: 283 ARDTMKEMEEHGFSPSVITYTSLIEAYCMEKDFQTVYAILNEMCSKGCRPNVITYTIVMH 342
Query: 159 LCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
+ + + AL +++ + G + + +L G+L +A F EM G P
Sbjct: 343 ALGKAGRTQEALDVFDKVKRDGCVPDASFYNSIIYILGRAGRLEDANSVFDEMCRTGIPP 402
Query: 219 SQVSFRR-IKALMELANKQEALQNL 242
+ F I A + + + AL+ L
Sbjct: 403 TVAIFNTMISAACDHSQAENALKIL 427
>gi|224085950|ref|XP_002307751.1| predicted protein [Populus trichocarpa]
gi|222857200|gb|EEE94747.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 122/247 (49%), Gaps = 1/247 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G+KP++ +Y+ +ID C+ Q+ +A+ I +M D P+ I+Y S++ G+
Sbjct: 224 MKVAGIKPNVYTYSIVIDSLCRCGQITRAHDIFAEMLDAGCQPNSITYNSLMRIHVKAGR 283
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+K V +MK GC PD YN I +C + L DA ++ M +KG +PNA+T+N
Sbjct: 284 TEKVLQVYNQMKRLGCEPDTVTYNFLIETHCKDENLEDAIKVIGLMAKKGCAPNASTFNT 343
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F D+ ++ +Y +M C NT + L+K+ + ++ L+L +M E
Sbjct: 344 LFGCIAKLGDVNAAHRMYKKMKELNCEANTVTYNTLMKMFVASKSTDMVLKLKTEMDENK 403
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMI-EKGHKPSQVSFRRIKALMELANKQEAL 239
+ VL + C MG A K F EMI EK +PS + + + A + +
Sbjct: 404 IEPNVNTYKVLITMYCGMGHWNNAYKFFREMIDEKCLRPSLPVYDMVLQQLRKAGQLKKH 463
Query: 240 QNLSNKM 246
+ L KM
Sbjct: 464 EELVEKM 470
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 120/246 (48%), Gaps = 1/246 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + KPD ++++ LI + C++R+ +A + + ++D+ PDVI YT+++ G G
Sbjct: 155 MEDYNCKPDKIAFSILISILCRERRASQAQEFFDSLKDK-FEPDVIVYTNLVRGWCRAGN 213
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A V EMK G P+ Y+ I + C ++ A + EM++ G PN+ TYN
Sbjct: 214 ISEAERVFGEMKVAGIKPNVYTYSIVIDSLCRCGQITRAHDIFAEMLDAGCQPNSITYNS 273
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
R+ + +Y +M GC P+T + FL++ + E +E A+++ M +KG
Sbjct: 274 LMRIHVKAGRTEKVLQVYNQMKRLGCEPDTVTYNFLIETHCKDENLEDAIKVIGLMAKKG 333
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ LF + +G + A + + +M E + + V++ + + + + +
Sbjct: 334 CAPNASTFNTLFGCIAKLGDVNAAHRMYKKMKELNCEANTVTYNTLMKMFVASKSTDMVL 393
Query: 241 NLSNKM 246
L +M
Sbjct: 394 KLKTEM 399
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/256 (19%), Positives = 99/256 (38%), Gaps = 34/256 (13%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G + +YN ++D + + A+ ++ M+ ++ V ++ ++ G +A
Sbjct: 89 GFRKSPEAYNEMVDFSGQVMMFDVAWYFIDLMKARNVDVTVETFLILMRRYVRAGLAAEA 148
Query: 65 RDVLKEMKEYGCYPDAAA----------------------------------YNAAIRNY 90
M++Y C PD A Y +R +
Sbjct: 149 IHAFNRMEDYNCKPDKIAFSILISILCRERRASQAQEFFDSLKDKFEPDVIVYTNLVRGW 208
Query: 91 CIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNT 150
C A + +A + EM G+ PN TY++ + + +++ M+ GC PN+
Sbjct: 209 CRAGNISEAERVFGEMKVAGIKPNVYTYSIVIDSLCRCGQITRAHDIFAEMLDAGCQPNS 268
Query: 151 QSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLE 210
+ L+++ + + E LQ++N M G + + L + C L +A K
Sbjct: 269 ITYNSLMRIHVKAGRTEKVLQVYNQMKRLGCEPDTVTYNFLIETHCKDENLEDAIKVIGL 328
Query: 211 MIEKGHKPSQVSFRRI 226
M +KG P+ +F +
Sbjct: 329 MAKKGCAPNASTFNTL 344
>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
Length = 528
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 129/255 (50%), Gaps = 2/255 (0%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
EM P ++YN LI YC+ +++A +++ KM D+ +PDV++YT+++ +G+ D
Sbjct: 239 EMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLD 298
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
A ++ ++M PD + + + C R+ DA L++E+ +G P TYN
Sbjct: 299 DAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVV 358
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG-- 180
+ +N +R + L G +PNT + LV C R + + ALQ + + +G
Sbjct: 359 DGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGP 418
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ + + ++ D LC G+ +A + + EMI++G+ P+ +F + + A++ +
Sbjct: 419 CPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAH 478
Query: 241 NLSNKMALFGPSMIP 255
L +M +G + P
Sbjct: 479 ELLEEMIKYGHTPGP 493
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 112/223 (50%), Gaps = 3/223 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G P +V+YN +I +C+ R+V++A+ +E+M E PD+I+YT++IGG
Sbjct: 135 MAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRD 194
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ ++L E+ G PD Y+ I C A RLRDA + +EM +P A TYN
Sbjct: 195 VGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCAPTAITYNS 251
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + D+ + L +M+ C P+ + L+ + +++ A +L+ MV
Sbjct: 252 LIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANK 311
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ L D LC G++ +A + E+ +G P+ ++
Sbjct: 312 LSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTY 354
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 122/248 (49%), Gaps = 4/248 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PDI++Y LI +CK R V + +++ ++ +PD+++Y+++I GL G+ A
Sbjct: 174 GCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDA 233
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
D+ +EM C P A YN+ I YC A + +A L+ +MV+ +P+ TY
Sbjct: 234 VDIFEEMS---CAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSA 290
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
F L ++ L+ +M+ P+ + LV + ++E AL+L ++ +G
Sbjct: 291 FCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPT 350
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQ-EALQNLS 243
I + + D C ++ +AE+ + +G P+ V++ + A A + +ALQ L
Sbjct: 351 IYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLD 410
Query: 244 NKMALFGP 251
+ GP
Sbjct: 411 QLNSEGGP 418
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 108/223 (48%), Gaps = 3/223 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ + ++Y+ L+D CK ++++A +VE M + +P V++Y SII G +
Sbjct: 100 MLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARR 159
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A +++M GC+PD Y A I +C ++ + L+ E+ +G +P+ TY+
Sbjct: 160 VDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYST 219
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ LR + +++ M C P + L+ R ++ A++L MV+
Sbjct: 220 VIDGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDK 276
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ L C MG+L +A + F +M+ P V+F
Sbjct: 277 CAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTF 319
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 102/205 (49%), Gaps = 2/205 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD ++Y L+ K R++ A +++++M PD + T ++ L L + D AR++
Sbjct: 37 PDFLTYTKLVHGLSKARRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDAREL 96
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
++EM G +A Y+A + C +RL +A L++ M E+G +P TYN F
Sbjct: 97 VEEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCR 156
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+ + + +M+ GC P+ + L+ CK ++ V L+L ++ +GF I+
Sbjct: 157 ARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRD-VGRGLELLGEVTRRGFTPDIV 215
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEM 211
+ D LC G+L +A F EM
Sbjct: 216 TYSTVIDGLCKAGRLRDAVDIFEEM 240
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 70/177 (39%), Gaps = 43/177 (24%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G P I +YNC++D YCK QV KA ++V R P+ ++Y ++ G G+ D+A
Sbjct: 346 GCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQA 405
Query: 65 RDVL-------------------------------------KEMKEYGCYPDAAAYNAAI 87
L +EM + G P AA + +
Sbjct: 406 LQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVV 465
Query: 88 RNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF------YWSNDLRSSWNLY 138
C A + + A L++EM++ G +P T + + +++L S LY
Sbjct: 466 FALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASELRLY 522
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 83/184 (45%), Gaps = 3/184 (1%)
Query: 41 ISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDAS 100
++P + + +IGGL G+ A V ++M + PD Y + A+RLRDA
Sbjct: 1 MNPGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAH-PPDFLTYTKLVHGLSKARRLRDAV 59
Query: 101 GLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-L 159
++ EMV P+ TT + + + + + L M+ G N + LV L
Sbjct: 60 QVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGL 119
Query: 160 CKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
CK E+++ A+ L M E+G ++ + + C ++ EA +M+ +G P
Sbjct: 120 CK-CERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPD 178
Query: 220 QVSF 223
+++
Sbjct: 179 IITY 182
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 64/149 (42%), Gaps = 1/149 (0%)
Query: 78 PDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNL 137
P +N I C A RLR A G+ +M P+ TY + LR + +
Sbjct: 3 PGTLLHNVVIGGLCRAGRLRHALGVYRQM-NDAHPPDFLTYTKLVHGLSKARRLRDAVQV 61
Query: 138 YCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCD 197
M+ +P+ + +V+ ++V+ A +L +M+ +G + + L D LC
Sbjct: 62 LQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCK 121
Query: 198 MGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+L EA M E+G P+ V++ I
Sbjct: 122 CERLDEAVALVETMAERGCAPTVVTYNSI 150
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 52/105 (49%), Gaps = 1/105 (0%)
Query: 3 EMGVKPDIVS-YNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
E G P V+ Y ++D C+D + + A + E+M P ++ +++ L QP
Sbjct: 415 EGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQP 474
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEM 106
+A ++L+EM +YG P +A + YC A ++ A L E+
Sbjct: 475 QQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASEL 519
>gi|449451922|ref|XP_004143709.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g61360-like [Cucumis sativus]
gi|449520004|ref|XP_004167024.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g61360-like [Cucumis sativus]
Length = 504
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 128/254 (50%), Gaps = 3/254 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G KP+ V+Y+ ID YCK ++ ++M P + + T++I G G+V
Sbjct: 244 MIKRGFKPNAVTYSIRIDAYCKKGCFVDGLRVFKEMERAKCEPTLETITTLIHGAGIVKD 303
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KAR + E+ PD AYNA I + + ++ A+ +M++M K + ++ TY++
Sbjct: 304 KTKARQLFDEIPLRNLCPDIGAYNALISSLIRSGDVKSAASVMEDMEAKHIEHDSVTYHM 363
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F D+ + LY +M+G +P T++ + ++K +V++ L W +VEKG
Sbjct: 364 MFSGLIRLEDVGGFYELYIKMVGRNFVPKTRTAVMIMKFFCENRRVDLGLGFWAYLVEKG 423
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF---RRIKALMELANKQE 237
+ + V D+L LC G +++A + +M+E+G + S+ +F R +K E
Sbjct: 424 YCPHSHVLDLLVTGLCARGMVLQAFECSKQMLERGRQMSEAAFLIMERCLLKAHATDKYE 483
Query: 238 ALQNLSNKMALFGP 251
L+ L K+ P
Sbjct: 484 ELERLRKKLKTVLP 497
>gi|224069250|ref|XP_002302937.1| predicted protein [Populus trichocarpa]
gi|222844663|gb|EEE82210.1| predicted protein [Populus trichocarpa]
Length = 564
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 121/226 (53%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G+ P++ +YNCL++ YC + ++ +A+ + ++MR+ + +V++Y ++IGG+ +
Sbjct: 258 MKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREER 317
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++ +MK+ P+ YN I +C L AS L+D++ GLSP+ TYN+
Sbjct: 318 VWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNI 377
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + + +L M G G P+ +C L+ R +++E A Q+++ M + G
Sbjct: 378 LIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFG 437
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ V VL LC G + E+ K F M E +PS V + +
Sbjct: 438 LVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTM 483
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 125/251 (49%), Gaps = 10/251 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MRE GV+ ++V+YN LI C++ +V +A K+V++M+ +SP++I+Y ++IGG VG
Sbjct: 293 MRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGN 352
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA +L ++K G P YN I Y A + + L EM +G+SP+ T +
Sbjct: 353 LDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTV 412
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+ ++ ++ +Y M G +P+ L+ LC + E + +L+ M E
Sbjct: 413 LIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESS-KLFRSMGEM 471
Query: 180 GFGSYILVSDVLFDLL----CDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANK 235
++ SDV+++ + C A + EM KG P+ S+ I ++ K
Sbjct: 472 ----HVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGK 527
Query: 236 QEALQNLSNKM 246
E + L +KM
Sbjct: 528 WEEAEVLLDKM 538
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 99/223 (44%), Gaps = 35/223 (15%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+++MG+ P++V Y LID CK+ +E+A +KM + + + ++T +I GL G
Sbjct: 188 LQDMGLSPNVVIYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGL 247
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+ ++MK G +P+ YN + YC ++ A L DEM E+G+ N TYN
Sbjct: 248 KKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYN- 306
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++G C R+E+V A +L + M +
Sbjct: 307 -------------------TLIGGMC---------------REERVWEAEKLVDQMKKAA 332
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + L CD+G L +A ++ G PS V++
Sbjct: 333 VSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTY 375
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 80/178 (44%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
++ G+ P +V+YN LI+ Y K + + +M ISP ++ T +I + +
Sbjct: 363 LKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQE 422
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA + M+++G PD Y I C+ ++++S L M E + P+ YN
Sbjct: 423 MEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNT 482
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
+ ++ + L M G +PN S ++ + + K E A L + M+E
Sbjct: 483 MIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKMIE 540
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 104/222 (46%), Gaps = 7/222 (3%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
+P+I +N L+ + EKA+ +++ E + DV S+ +I G G DK+
Sbjct: 127 RPNI--FNSLLGSLVRSNCFEKAWLFFNELK-ERVKFDVYSFGIMIKGCCENGNLDKSFQ 183
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
+L +++ G P+ Y I C + A D+M E GL N T+ + +
Sbjct: 184 LLGLLQDMGLSPNVVIYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLF 243
Query: 127 WSNDLRSSWNLYCRMMGTGCLPN--TQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ ++L+ +M G PN T +C+ + + C + K+ A L+++M E+G +
Sbjct: 244 KKGLKKDGFDLFEKMKINGLFPNLYTYNCL-MNEYCG-EGKICRAFDLFDEMRERGVEAN 301
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ + L +C ++ EAEK +M + P+ +++ +
Sbjct: 302 VVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTL 343
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 62/120 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ PD+ Y LI C ++++ K+ M + + P + Y ++I G
Sbjct: 433 MEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDN 492
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A +L+EM+ G P+ A+Y++ I C + +A L+D+M+E L P+A+ N+
Sbjct: 493 SYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKMIELQLKPSASILNM 552
Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 58/144 (40%), Gaps = 1/144 (0%)
Query: 80 AAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYC 139
A Y + I + ++ L A +EMV+KGL +N SN +W L+
Sbjct: 93 ALLYESIINAHLKSQLLDKALIFFNEMVDKGLVFRPNIFNSLLGSLVRSNCFEKAW-LFF 151
Query: 140 RMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMG 199
+ + S ++K C ++ + QL + + G +++ L D C G
Sbjct: 152 NELKERVKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNG 211
Query: 200 KLVEAEKSFLEMIEKGHKPSQVSF 223
+ A F +M E G +Q +F
Sbjct: 212 DIERARLFFDKMGEMGLVANQYTF 235
>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 572
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 122/270 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + +KPD+V+YN L+D +C ++ K + + M + P VISYT++I G +
Sbjct: 290 MIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQI 349
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA + +EM + G PD YN I C RLRDA L EMV G P+ TY +
Sbjct: 350 MDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRI 409
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F ++ L + L + GT P+ ++ R ++E A L++ + KG
Sbjct: 410 LFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKG 469
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ ++ + LC G L EA K F EM E G P+ ++ I N+
Sbjct: 470 LHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAI 529
Query: 241 NLSNKMALFGPSMIPKREEYLAEMSASDSF 270
L +M G S+ L EM + D
Sbjct: 530 QLFQEMLSRGFSIDVSTTTLLVEMLSDDGL 559
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 112/224 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + +P +V Y+ +ID CKDRQ+ +A + M + ISP+ +Y+S+I GL ++G
Sbjct: 185 MEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGH 244
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + M PD +N + C + A ++D M++ L P+ TYN
Sbjct: 245 WKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNS 304
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+++ + N++ M+ GC+P+ S L+ + + ++ A+ L+ +M ++G
Sbjct: 305 LMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQG 364
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
+ + L LC +G+L +A F EM+ G P V++R
Sbjct: 365 LIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYR 408
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 117/251 (46%), Gaps = 14/251 (5%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
++G +P ++ LI C + ++ +A ++ +KM E PDV++Y ++I GL VG
Sbjct: 117 KLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTS 176
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
A L+ M++ C P Y+ I + C ++L +A L +M+ KG+SPN TY+
Sbjct: 177 TAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLI 236
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEKGF 181
+ + L+ M+ +P+ + LV LCK V+ A + + M++
Sbjct: 237 HGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVK-AHYVVDVMIQSDL 295
Query: 182 GSYILVSDVLFDLLC---DMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEA 238
++ + L D C +MGK V F M+ KG PS +S+ L N
Sbjct: 296 KPDVVTYNSLMDGHCLRSEMGKTVNV---FDTMVRKGCVPSVISYT------TLINGYCK 346
Query: 239 LQNLSNKMALF 249
+Q + M LF
Sbjct: 347 IQIMDKAMGLF 357
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 92/227 (40%), Gaps = 2/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M M P IV ++ L+ + + + ++M I + + +I + +
Sbjct: 45 MLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNR 104
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A VL ++ + G P A + IR C+ ++ +A L D+M +G P+ TY
Sbjct: 105 LGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGT 164
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEK 179
+ ++ M C P ++ LCK ++ E AL L++DM+ K
Sbjct: 165 LINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTE-ALSLFSDMLAK 223
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G L LC +G EA + F MI + P Q++F +
Sbjct: 224 GISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTL 270
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/217 (20%), Positives = 94/217 (43%), Gaps = 3/217 (1%)
Query: 26 VEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNA 85
++ A + +M P ++ ++ ++ + + + K+M +G + N
Sbjct: 35 IDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNI 94
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
I ++C RL A ++ ++++ G P+ T+ R + + L+ +M G G
Sbjct: 95 LINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEG 154
Query: 146 CLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEA 204
P+ + L+ LCK A++ M ++ ++V + D LC +L EA
Sbjct: 155 FQPDVLTYGTLINGLCK-VGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEA 213
Query: 205 EKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQ 240
F +M+ KG P+ ++ I L L + +EA++
Sbjct: 214 LSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIR 250
>gi|326524964|dbj|BAK04418.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 565
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 119/232 (51%), Gaps = 1/232 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G++PD+V+Y LI +CK + ++A K+ +M P Y +I GLG +
Sbjct: 310 MLDAGLQPDVVAYGMLISSFCKSGKCDEAIKVFREMETNGCMPSPHVYCMLINGLGSEER 369
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + K G + NA + YC + + + A ++DEM + G+ PN+ TY++
Sbjct: 370 LDEALKYFELSKASGFPMEVPTCNAVVGAYCRSSKFQHAFKMVDEMRKSGIGPNSRTYDI 429
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
S + ++N++ M GC P + +V + E+V++AL++WN M EKG
Sbjct: 430 ILHHLIKSQKIEEAYNVFQGMSKDGCEPQLNTYTMMVGMFCSNERVDVALKVWNQMKEKG 489
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIK-ALME 231
+ + L + LC +L EA F EM+++G +P F +K AL+E
Sbjct: 490 VLPCMHMFSALINGLCFENRLEEACAYFQEMLDRGIRPPGQLFSNLKEALIE 541
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 99/237 (41%), Gaps = 1/237 (0%)
Query: 12 SYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEM 71
++ ++ Y + R+V++A + EKM + D+ Y +I L Q KA + KEM
Sbjct: 215 TFRLIVRRYARARKVKEAVETFEKMAGFGLKADLSDYNWLIDVLSKSKQVKKAHAIFKEM 274
Query: 72 KEYGCY-PDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSND 130
K G + PD Y + + K L + EM++ GL P+ Y + F S
Sbjct: 275 KRNGRFVPDLKTYTVLMEGWGHEKDLLMLKSVYQEMLDAGLQPDVVAYGMLISSFCKSGK 334
Query: 131 LRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDV 190
+ ++ M GC+P+ L+ +E+++ AL+ + GF + +
Sbjct: 335 CDEAIKVFREMETNGCMPSPHVYCMLINGLGSEERLDEALKYFELSKASGFPMEVPTCNA 394
Query: 191 LFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMA 247
+ C K A K EM + G P+ ++ I + + K E N+ M+
Sbjct: 395 VVGAYCRSSKFQHAFKMVDEMRKSGIGPNSRTYDIILHHLIKSQKIEEAYNVFQGMS 451
>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05670, mitochondrial; Flags: Precursor
gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
Length = 741
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 107/223 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ PD V Y LID +CK + A K +M DI+PDV++YT+II G +G
Sbjct: 342 MIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGD 401
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + EM G PD+ + I YC A ++DA + + M++ G SPN TY
Sbjct: 402 MVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTT 461
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
DL S+ L M G PN + +V + +E A++L + G
Sbjct: 462 LIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAG 521
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + L D C G++ +A++ EM+ KG +P+ V+F
Sbjct: 522 LNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTF 564
Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 116/215 (53%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++G++P+I +YN +++ CK +E+A K+V + ++ D ++YT+++ G+
Sbjct: 482 MWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGE 541
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA+++LKEM G P +N + +C+ L D L++ M+ KG++PNATT+N
Sbjct: 542 MDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNS 601
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + N+L+++ +Y M G P+ ++ LVK + ++ A L+ +M KG
Sbjct: 602 LVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKG 661
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
F + VL K +EA + F +M +G
Sbjct: 662 FSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREG 696
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 116/241 (48%), Gaps = 1/241 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD++SY+ +++ YC+ +++K +K++E M+ + + P+ Y SIIG L + +
Sbjct: 272 MELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICK 331
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + EM G PD Y I +C +R AS EM + ++P+ TY
Sbjct: 332 LAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTA 391
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F D+ + L+ M G P++ + L+ + ++ A ++ N M++ G
Sbjct: 392 IISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG 451
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI-KALMELANKQEAL 239
++ L D LC G L A + EM + G +P+ ++ I L + N +EA+
Sbjct: 452 CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 511
Query: 240 Q 240
+
Sbjct: 512 K 512
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 99/193 (51%), Gaps = 4/193 (2%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ D V+Y L+D YCK +++KA +I+++M + + P ++++ ++ G L G +
Sbjct: 521 GLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDG 580
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+L M G P+A +N+ ++ YCI L+ A+ + +M +G+ P+ TY +
Sbjct: 581 EKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKG 640
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ +++ +W L+ M G G + + L+K +++K A ++++ M +G +
Sbjct: 641 HCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAA- 699
Query: 185 ILVSDVLFDLLCD 197
+FD D
Sbjct: 700 ---DKEIFDFFSD 709
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 110/222 (49%), Gaps = 2/222 (0%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E+GV ++ SYN +I C+ ++++A+ ++ M + +PDVISY++++ G G+ D
Sbjct: 239 EVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELD 298
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
K +++ MK G P++ Y + I C +L +A EM+ +G+ P+ Y
Sbjct: 299 KVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLI 358
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGF 181
F D+R++ + M P+ + ++ C+ + VE A +L+++M KG
Sbjct: 359 DGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVE-AGKLFHEMFCKGL 417
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ L + C G + +A + MI+ G P+ V++
Sbjct: 418 EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTY 459
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 112/250 (44%), Gaps = 6/250 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G+KP+ Y +I + C+ ++ +A + +M + I PD + YT++I G G
Sbjct: 307 MKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGD 366
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A EM PD Y A I +C + +A L EM KGL P++ T+
Sbjct: 367 IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTE 426
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+ + ++ ++ ++ M+ GC PN + L+ LCK + ++ A +L ++M +
Sbjct: 427 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD-LDSANELLHEMWKI 485
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALM----ELANK 235
G I + + + LC G + EA K E G V++ + E+
Sbjct: 486 GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA 545
Query: 236 QEALQNLSNK 245
QE L+ + K
Sbjct: 546 QEILKEMLGK 555
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 83/184 (45%), Gaps = 2/184 (1%)
Query: 44 DVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLM 103
+V SY +I + +G+ +A +L M+ G PD +Y+ + YC L L+
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304
Query: 104 DEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKR 162
+ M KGL PN+ Y + L + + M+ G LP+T L+ CKR
Sbjct: 305 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKR 364
Query: 163 QEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
+ + A + + +M + +L + C +G +VEA K F EM KG +P V+
Sbjct: 365 GD-IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVT 423
Query: 223 FRRI 226
F +
Sbjct: 424 FTEL 427
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 71/160 (44%)
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
V +E E G + A+YN I C R+++A L+ M KG +P+ +Y+ +
Sbjct: 233 VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYC 292
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+L W L M G PN+ ++ L R K+ A + +++M+ +G +
Sbjct: 293 RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV 352
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
V L D C G + A K F EM + P +++ I
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAI 392
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 57/121 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ P+ ++N L+ YC ++ A I + M + PD +Y +++ G
Sbjct: 587 MLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARN 646
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + +EMK G + Y+ I+ + K+ +A + D+M +GL+ + ++
Sbjct: 647 MKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDF 706
Query: 121 F 121
F
Sbjct: 707 F 707
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 58/119 (48%), Gaps = 1/119 (0%)
Query: 109 KGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSC-MFLVKLCKRQEKVE 167
K + +++FF+V LR + ++ +M+ G + + SC ++L +L K K
Sbjct: 169 KDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTA 228
Query: 168 IALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
A+ ++ + E G + +++ +C +G++ EA L M KG+ P +S+ +
Sbjct: 229 TAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTV 287
>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
Length = 831
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 117/232 (50%), Gaps = 6/232 (2%)
Query: 13 YNCLIDVYCKDRQVEKAYKIVEKMRDE-DISPDVISYTSIIGGLGLVGQPDKARDVLKEM 71
YN L++ CK ++V +A+ I M E PDV+SY+ +I G + + +A + K+M
Sbjct: 449 YNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQM 508
Query: 72 KEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDL 131
+ C P+ YNA + R+ DA G+ +EMV G SP+ TY+ F +
Sbjct: 509 IDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKH 568
Query: 132 RSSWNLYCRMMGTGCLPN--TQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSD 189
+ L+ M+ GC PN T +C+ L LCK + K + A +L+ MVE+G +
Sbjct: 569 DQAHELFETMISRGCRPNAVTYNCL-LHGLCK-ESKPDEAHELFRKMVERGCDPDRVTYT 626
Query: 190 VLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEALQ 240
L C++GK+ +A + F EM+ KGH P V++ +K EA Q
Sbjct: 627 TLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQ 678
Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 112/215 (52%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD+VSY+ LID +CK ++ +A K+ ++M D + P+V +Y + + GL G+ A+ V
Sbjct: 480 PDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGV 539
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
+EM GC PD Y+ I + +A++ A L + M+ +G PNA TYN
Sbjct: 540 YEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCK 599
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ + L+ +M+ GC P+ + L+ K+E A++++++MV KG ++
Sbjct: 600 ESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVA 659
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
+ L GK EA++ F M+ + KP VS
Sbjct: 660 YNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVS 694
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 107/212 (50%), Gaps = 1/212 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD+++Y+ LI + R+ ++A+++ E M P+ ++Y ++ GL +
Sbjct: 543 MVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESK 602
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
PD+A ++ ++M E GC PD Y + +C ++ A + DEMV KG P+ YN
Sbjct: 603 PDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNC 662
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE-K 179
+ F+ + + L+ M+ C P+T S ++ + ++++ A++++ M +
Sbjct: 663 LLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDH 722
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEM 211
G ++ + L LC +L EA K F E+
Sbjct: 723 GCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEI 754
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 117/251 (46%), Gaps = 9/251 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++ P++ +YN ++ + ++ A + E+M SPDVI+Y+++I G L +
Sbjct: 508 MIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARK 567
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A ++ + M GC P+A YN + C + +A L +MVE+G P+ TY
Sbjct: 568 HDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTT 627
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + + ++ M+ G P+ + L+K R K A QL+ MV +
Sbjct: 628 LLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQ 687
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGH--KPSQVSFRRIKALMELANKQEA 238
+ +++ D L +L +A + F E +E+ H P V++ + + L +
Sbjct: 688 CKPDTVSHNIMIDGLSKAKRLDDAVEVF-ERMEQDHGCSPDLVTYNSL--IFGLCGE--- 741
Query: 239 LQNLSNKMALF 249
Q LS M +F
Sbjct: 742 -QRLSEAMKVF 751
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 64/123 (52%), Gaps = 1/123 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD+V+YNCL+ + + + +A ++ + M PD +S+ +I GL +
Sbjct: 648 MVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKR 707
Query: 61 PDKARDVLKEM-KEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
D A +V + M +++GC PD YN+ I C +RL +A + E+ LSP+ +N
Sbjct: 708 LDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFN 767
Query: 120 LFF 122
+
Sbjct: 768 VLL 770
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 103/250 (41%), Gaps = 39/250 (15%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
K D+ +YNCL+D + R +++A ++ EKM + + P+ +Y ++ D+A
Sbjct: 126 KHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLVQSSCYERNSDEAVR 185
Query: 67 VLKEMKEYGCYPDAAAYN-----------------------------------AAIRNYC 91
EM + G P + Y A + N+
Sbjct: 186 FFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVAVEMMLKKALLVNFV 245
Query: 92 IAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLP--N 149
I + +AS L MV+ G P+AT Y+ +L ++ L+ M P N
Sbjct: 246 IQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNN 305
Query: 150 TQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFL 209
FL LCK K+E A + M E S V D+L LL + G++ +AE++ L
Sbjct: 306 VAWTAFLSGLCK-SGKIEQAFEACRTMQE-SLSSSQPVYDMLIRLLIESGRIDKAEEACL 363
Query: 210 EMIEKGHKPS 219
E+ + +PS
Sbjct: 364 EIAGRNIQPS 373
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 103/221 (46%), Gaps = 3/221 (1%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
++P + + +I CK +V+ A ++E M PD+ +++ +I L + +A+
Sbjct: 370 IQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQ 429
Query: 66 DVLKEM--KEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMV-EKGLSPNATTYNLFF 122
+ L+ M K +YN+ + + C AK++ A + MV E+ P+ +Y++
Sbjct: 430 EFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILI 489
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
F ++L + LY +M+ C+PN + + R+ ++ A ++ +MV G
Sbjct: 490 DGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCS 549
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ L K +A + F MI +G +P+ V++
Sbjct: 550 PDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTY 590
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 113/262 (43%), Gaps = 40/262 (15%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISP-DVISYTSIIGGLGLVG 59
M + G KPD Y+ ++ +CK +++A+K+ +M E +P + +++T+ + GL G
Sbjct: 260 MVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSG 319
Query: 60 -------------------QP---------------DKARDVLKEMKEYGCYPDAAAYNA 85
QP DKA + E+ P + ++
Sbjct: 320 KIEQAFEACRTMQESLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHS 379
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYC---RMM 142
I+ C A R+ A L++ M+++G P+ T+++ ++ ++ + R +
Sbjct: 380 VIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKI 439
Query: 143 GTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV-EKGFGSYILVSDVLFDLLCDMGKL 201
+ L LCK +KV A +++ MV E+ F ++ +L D C + +L
Sbjct: 440 SSRSSSCFSYNSLLNSLCK-AKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDEL 498
Query: 202 VEAEKSFLEMIEKGHKPSQVSF 223
AEK + +MI+ P+ ++
Sbjct: 499 GRAEKLYKQMIDLNCVPNVTTY 520
>gi|297807667|ref|XP_002871717.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317554|gb|EFH47976.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 533
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 115/227 (50%), Gaps = 1/227 (0%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
G+ P+I + N L+ CK +E AYK+++++ + P++++YT+I+GG G +
Sbjct: 183 FGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPAMGLVPNLVTYTTILGGYVARGDMES 242
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
A+ VL+EM + G YPDA Y + YC R +A+ +MD+M + + PN TY + R
Sbjct: 243 AKRVLEEMLDRGWYPDAITYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIR 302
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
+ N++ M+ +P++ C ++ KV+ A LW M++
Sbjct: 303 ALCKEKKSGEARNMFDEMLDRSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMP 362
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALM 230
+ L LC G++ EA K F E +KG PS +++ + A M
Sbjct: 363 DNALLSTLIHWLCKEGRVSEARKLFDE-FDKGSIPSLLTYNTLIAGM 408
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 122/240 (50%), Gaps = 2/240 (0%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
MG+ P++V+Y ++ Y +E A +++E+M D PD I+YT ++ G +G+ +
Sbjct: 218 MGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDAITYTVLMDGYCKLGRFSE 277
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
A V+ +M++ P+ Y IR C K+ +A + DEM+++ P+++
Sbjct: 278 AATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLDRSFMPDSSLCCKVID 337
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
+ + + L+ +M+ C+P+ L+ ++ +V A +L+ D +KG
Sbjct: 338 ALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVSEARKLF-DEFDKGSIP 396
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEALQNL 242
+L + L +C+ G+L EA + + +M E+ KP+ ++ I+ L + N +E ++ L
Sbjct: 397 SLLTYNTLIAGMCEKGELTEAGRLWDDMFERKCKPNAFTYNVLIEGLSKNGNVKEGVRVL 456
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 117/245 (47%), Gaps = 4/245 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G PD ++Y L+D YCK + +A +++ M +I P+ ++Y +I L +
Sbjct: 250 MLDRGWYPDAITYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKK 309
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR++ EM + PD++ I C ++ +A GL +M++ P+ +
Sbjct: 310 SGEARNMFDEMLDRSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLST 369
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+ + L+ G +P+ + L+ +C++ E E A +LW+DM E+
Sbjct: 370 LIHWLCKEGRVSEARKLFDE-FDKGSIPSLLTYNTLIAGMCEKGELTE-AGRLWDDMFER 427
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI-KALMELANKQEA 238
+VL + L G + E + EM+E G P++ +F + + L +L +++A
Sbjct: 428 KCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLESGCFPNKTTFLILFEGLQKLGKEEDA 487
Query: 239 LQNLS 243
++ +S
Sbjct: 488 IKIVS 492
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 82/169 (48%), Gaps = 6/169 (3%)
Query: 16 LIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYG 75
+ID C+D +V++A + KM + PD +++I L G+ +AR + E + G
Sbjct: 335 VIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVSEARKLFDEFDK-G 393
Query: 76 CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSW 135
P YN I C L +A L D+M E+ PNA TYN+ + +++
Sbjct: 394 SIPSLLTYNTLIAGMCEKGELTEAGRLWDDMFERKCKPNAFTYNVLIEGLSKNGNVKEGV 453
Query: 136 NLYCRMMGTGCLPNTQSCMFLV----KLCKRQEKVEI-ALQLWNDMVEK 179
+ M+ +GC PN + + L KL K ++ ++I ++ + N V+K
Sbjct: 454 RVLEEMLESGCFPNKTTFLILFEGLQKLGKEEDAIKIVSMAVMNGKVDK 502
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 93/230 (40%), Gaps = 5/230 (2%)
Query: 14 NCLIDV---YCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKE 70
N ID+ Y + E + +I ++ D + V S +++ L + D + K
Sbjct: 119 NLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKN 178
Query: 71 MKE-YGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSN 129
KE +G P+ N ++ C + A ++DE+ GL PN TY +
Sbjct: 179 SKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPAMGLVPNLVTYTTILGGYVARG 238
Query: 130 DLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSD 189
D+ S+ + M+ G P+ + L+ + + A + +DM + +
Sbjct: 239 DMESAKRVLEEMLDRGWYPDAITYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYG 298
Query: 190 VLFDLLCDMGKLVEAEKSFLEMIEKGHKP-SQVSFRRIKALMELANKQEA 238
V+ LC K EA F EM+++ P S + + I AL E EA
Sbjct: 299 VMIRALCKEKKSGEARNMFDEMLDRSFMPDSSLCCKVIDALCEDHKVDEA 348
>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
Length = 695
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 121/223 (54%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G++PD+++YN LID YCK + V++A + +++ ++++ P + SY S+I GL G+
Sbjct: 326 MVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGR 385
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ +L EM PD YN I C R+ +A G++ M++KG+ PN TYN
Sbjct: 386 ISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNA 445
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ N++ + +++ RM+ +G P+ + L+ + E V+ A+ L+ +M K
Sbjct: 446 MMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKN 505
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I + L D LC++G++ ++ EM + G P +++
Sbjct: 506 LIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITY 548
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 122/261 (46%), Gaps = 3/261 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GVKP+IV+YN ++D YC V A I +M + PD+++Y +I G
Sbjct: 431 MMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEM 490
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + KEM+ PD A+YN+ I C R+ L+DEM + G SP+ TYN+
Sbjct: 491 VDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNI 550
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEK 179
F + + +L+ R + G P+ + +V LCK EK+++A ++
Sbjct: 551 LLDAFCKTQPFDKAISLF-RQIVEGIWPDFYTNHAIVDNLCK-GEKLKMAEDALKHLLMH 608
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
G + +L + LC G EA +M + P ++F I ++ N+ +
Sbjct: 609 GCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKA 668
Query: 240 QNLSNKMALFGPSMIPKREEY 260
+ L +M G I KR Y
Sbjct: 669 EKLREEMIARGLVNIEKRLMY 689
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 120/248 (48%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E G+ D V+YN LID C + ++ +++ KM E++ PD ++ +I L G+
Sbjct: 223 ERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRIL 282
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
+A+ VL M + G PD YNA + YC + + +A L + MV++GL P+ YN+
Sbjct: 283 EAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLI 342
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
+ + + + L+ + +P S L+ ++ +L ++M
Sbjct: 343 DGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQP 402
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNL 242
++ ++L D LC G+++EA + M++KG KP+ V++ + L N +++
Sbjct: 403 PDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDI 462
Query: 243 SNKMALFG 250
N+M G
Sbjct: 463 FNRMVKSG 470
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 112/240 (46%), Gaps = 1/240 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + V+P++V Y+ LID CKD V A + ++ + I D ++Y S+I G VG+
Sbjct: 186 MEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGR 245
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ +L +M PD +N I C R+ +A G++ M ++G P+ TYN
Sbjct: 246 WQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNA 305
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ + L+ RM+ G P+ + L+ + + V+ A+ L+ ++ K
Sbjct: 306 LMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKN 365
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEAL 239
I + L D LC+ G++ +K EM P V++ I AL + EAL
Sbjct: 366 LVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEAL 425
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 103/218 (47%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
D +Y LI+ K+ Q++ A ++++M + P+++ Y+++I GL G A +
Sbjct: 159 DQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLC 218
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
++ E G DA YN+ I C R ++ + L+ +MV + + P+ T+N+
Sbjct: 219 SQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKE 278
Query: 129 NDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVS 188
+ + + M G P+ + L++ +E V A +L+N MV++G +L
Sbjct: 279 GRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNY 338
Query: 189 DVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+VL D C + EA F E+ K P+ S+ +
Sbjct: 339 NVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSL 376
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/224 (19%), Positives = 88/224 (39%), Gaps = 1/224 (0%)
Query: 21 CKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDA 80
C+ R V+ A +M P + ++G + +G A + +++ G P
Sbjct: 31 CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90
Query: 81 AAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCR 140
A + I Y A L+ +++ G PN T+N F + + + +
Sbjct: 91 ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150
Query: 141 MMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGK 200
++ G L + + L+ + +++ AL L +M + +++ L D LC G
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGF 210
Query: 201 LVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLS 243
+ +A ++ E+G V++ I + QE Q L+
Sbjct: 211 VSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLT 254
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/216 (18%), Positives = 84/216 (38%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P ++ L+ + A + +++ + ISP + ++T +I A +
Sbjct: 53 PPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSL 112
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L + + G P+ +N I +CI + A ++ +G + TY
Sbjct: 113 LATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSK 172
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ ++++ +L M + PN L+ + V AL L + + E+G +
Sbjct: 173 NGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVT 232
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ L D C +G+ E + +M+ + P +F
Sbjct: 233 YNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTF 268
>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 748
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 115/216 (53%), Gaps = 2/216 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G++ ++ YN +++ CK +E+A K++++M I PD I+YT++I +G
Sbjct: 494 MRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGD 553
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA +L+EM + G P +N + +C+ L D L+ M+EKG+ P+A TYN
Sbjct: 554 IDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNT 613
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ N + ++ +Y RM G P++ + L+K + ++ A L+ +M+EKG
Sbjct: 614 LMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKG 673
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGH 216
+ + + L K++EA + F EM +GH
Sbjct: 674 YVPTVTSYNALIKRFYKKKKILEARELFEEM--RGH 707
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 103/217 (47%), Gaps = 38/217 (17%)
Query: 1 MREM---GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGL 57
M+EM G+ PD ++Y +ID YC+ ++KA+K++++M D + P V+++ ++ G +
Sbjct: 526 MKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCM 585
Query: 58 VGQ-----------------PD------------------KARDVLKEMKEYGCYPDAAA 82
+G PD + K M+ G PD+
Sbjct: 586 LGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNT 645
Query: 83 YNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMM 142
YN I+ +C A+ L++A L EM+EKG P T+YN + FY + + L+ M
Sbjct: 646 YNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMR 705
Query: 143 GTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
G G + + + F V +C + VEI L L ++ +EK
Sbjct: 706 GHGLVADGEIYNFFVDMCYEEGDVEITLNLCDEAIEK 742
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 106/209 (50%), Gaps = 2/209 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD+VSY+ +ID YC +++KA K+++ M+ + + P+ +Y SII L +G+ +A V
Sbjct: 291 PDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKV 350
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L+EM PD Y I + +R A+ DEM+ K +SP+ TY + F
Sbjct: 351 LREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQ 410
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKL-CKRQEKVEIALQLWNDMVEKGFGSYIL 186
+ NL+ M+ G P+ + L+ + CK E V A L N+MV+ G I+
Sbjct: 411 GGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVN-AFSLHNEMVQMGMTPNIV 469
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
L D LC G+L A + EM +KG
Sbjct: 470 TYGALIDGLCKHGELDTANELLDEMRKKG 498
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 114/244 (46%), Gaps = 42/244 (17%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+KPD V+Y LIDVYCK ++ A+ + +M ++P++++Y ++I GL G+
Sbjct: 424 MISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGE 483
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A ++L EM++ G + YN+ + C A + A LM EM G+ P+A TY
Sbjct: 484 LDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYT- 542
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + YCR+ ++ A +L +M+++G
Sbjct: 543 ------------TVIDAYCRL----------------------GDIDKAHKLLQEMLDRG 568
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
++ +VL + C +G L + ++ M+EKG P +++ + KQ ++
Sbjct: 569 LQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLM-------KQHCIR 621
Query: 241 NLSN 244
N N
Sbjct: 622 NSMN 625
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 113/227 (49%), Gaps = 2/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G+KP+ +YN +I + CK + +A K++ +M + I PD + YT++I G +G
Sbjct: 319 MQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGH 378
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A EM PD Y I+ + ++ + L EM+ +GL P+ TY
Sbjct: 379 VRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTT 438
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
V+ + ++ ++++L+ M+ G PN + L+ LCK E ++ A +L ++M +K
Sbjct: 439 LIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGE-LDTANELLDEMRKK 497
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G + + + + + +C G + +A K EM G P +++ +
Sbjct: 498 GLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTV 544
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 111/221 (50%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E G+ + SYN +I C+ +V++A++++ +M +PDV+SY+++I G +G+
Sbjct: 251 EYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELK 310
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
KA ++ +M+ G P+ YN+ I C + +A ++ EM+ + + P+ Y
Sbjct: 311 KALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLI 370
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
F+ +R++ + M+ P+ + L++ + KV L+++M+ +G
Sbjct: 371 HGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLK 430
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ L D+ C G++V A EM++ G P+ V++
Sbjct: 431 PDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTY 471
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 95/222 (42%), Gaps = 2/222 (0%)
Query: 41 ISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDAS 100
IS + SY II L +G+ +A +L +M PD +Y+ I YC L+ A
Sbjct: 254 ISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKAL 313
Query: 101 GLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLC 160
LMD+M KGL PN TYN + + + MM +P+ L+
Sbjct: 314 KLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGF 373
Query: 161 KRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQ 220
+ V A + +++M+ K + L GK++E + F EMI +G KP +
Sbjct: 374 FKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDE 433
Query: 221 VSFRRIKALMELANKQEALQNLSNKMALFGPSMIPKREEYLA 262
V++ + + A + +L N+M G M P Y A
Sbjct: 434 VTYTTLIDVYCKAGEMVNAFSLHNEMVQMG--MTPNIVTYGA 473
>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
Length = 1512
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 117/224 (52%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G PD ++ LID CK+ +V +A +I+E MR + PD+++Y +++ GL LVGQ
Sbjct: 1181 MVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQ 1240
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A + + + + G + +YN I YC +++ +A +EM KGL P+ TYN
Sbjct: 1241 LEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNT 1300
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTG-CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
S +R++ L+ M G L + C+ L LCK +E A+ L+ + +
Sbjct: 1301 LIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGH-LEEAMDLFQSIKKT 1359
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I V +L D +C GKL EA K F E+ + G +P +++
Sbjct: 1360 EHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAY 1403
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 116/243 (47%), Gaps = 1/243 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G +PDI++YN L++ C Q+E A K+ E + D I +V SY +I G +
Sbjct: 1216 MRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQK 1275
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A +EM+ G P YN I C + R+R A L EM G +TY +
Sbjct: 1276 IDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCV 1335
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L + +L+ + T PN + L+ R K+E A + ++++ + G
Sbjct: 1336 LLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNG 1395
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
+ ++L + LC+ G L EA K +M EKG P ++F I+ L++ EA+
Sbjct: 1396 LEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAI 1455
Query: 240 QNL 242
Q L
Sbjct: 1456 QLL 1458
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 113/244 (46%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
K D+ +Y +ID CKD +A + +M I PDV+ Y+S++ GL G+ +A +
Sbjct: 1082 KGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALE 1141
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
KEM+ G D YN+ I A ++ + ++ MV++G SP+A T+ +
Sbjct: 1142 FFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLC 1201
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+ + + M G P+ + L+ ++E A +L+ + ++G +
Sbjct: 1202 KEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVF 1261
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKM 246
++L + C K+ EA + F EM KG KPS V++ + + + + Q L +M
Sbjct: 1262 SYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEM 1321
Query: 247 ALFG 250
G
Sbjct: 1322 QTCG 1325
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 97/207 (46%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ PD+V Y+ L+D C+ ++++A + ++M IS DV +Y S+I GL G +
Sbjct: 1115 GILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEV 1174
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
L M + G PDA + I C ++ +A +++ M KG P+ TYN
Sbjct: 1175 TWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNG 1234
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
L + L+ + G N S L+ + +K++ A + + +M KG
Sbjct: 1235 LCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPS 1294
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEM 211
+ + L LC G++ A+K F+EM
Sbjct: 1295 TVTYNTLIGALCQSGRVRTAQKLFVEM 1321
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 105/227 (46%), Gaps = 35/227 (15%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGL----- 55
+ + G+K ++ SYN LI+ YCKD+++++A++ E+MR + + P ++Y ++IG L
Sbjct: 1251 LADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGR 1310
Query: 56 ----------------------------GLV--GQPDKARDVLKEMKEYGCYPDAAAYNA 85
GL G ++A D+ + +K+ P+ ++
Sbjct: 1311 VRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSI 1370
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
+ C A +L +A DE+ + GL P+ YN+ L + L +M G
Sbjct: 1371 LLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKG 1430
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLF 192
CLP++ + +++ ++ ++ A+QL +M + F V+ +L
Sbjct: 1431 CLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 1477
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 85/183 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G + +Y L+D CK+ +E+A + + ++ + P++ ++ ++ G+ G+
Sbjct: 1321 MQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGK 1380
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A E+ + G PD AYN I C L +A L+ +M EKG P++ T+N+
Sbjct: 1381 LEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNV 1440
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ N++ + L M P+ L+ L + AL + ++KG
Sbjct: 1441 IIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLLCLASFDPQWHAALVSLPNALQKG 1500
Query: 181 FGS 183
GS
Sbjct: 1501 VGS 1503
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 113/283 (39%), Gaps = 38/283 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLV-G 59
+ ++G++PD+ + N LI C R V + + PD ++ T+++ G+ + G
Sbjct: 972 INDVGIQPDLYTLNILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENG 1031
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
PD A + EM + G DA Y I C A++ A L ++M + + TY
Sbjct: 1032 IPD-AVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKM-KGNCKGDVFTYG 1089
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQ-------- 171
+ + +++ M+G G LP+ L+ R +++ AL+
Sbjct: 1090 MIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGR 1149
Query: 172 --------------------LW-------NDMVEKGFGSYILVSDVLFDLLCDMGKLVEA 204
LW N MV++GF +L D LC GK+ EA
Sbjct: 1150 GISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEA 1209
Query: 205 EKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMA 247
++ M KG +P +++ + + L + E L +A
Sbjct: 1210 QQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLA 1252
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 90/218 (41%), Gaps = 4/218 (1%)
Query: 25 QVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYN 84
++ A K+ ++ + P ++ ++ + +G + +++ + G PD N
Sbjct: 926 KLNDAIKLFDRSLCSEPMPCTDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTLN 985
Query: 85 AAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGT 144
I C + + G+ +++G P+A T + + N + + L+ M
Sbjct: 986 ILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKK 1045
Query: 145 GCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVE 203
G L + ++ L+ LCK + K +A++L M G + ++ D LC G E
Sbjct: 1046 GLLGDAKTYGILINGLCKAR-KTGLAIKLHEKMKGNCKGD-VFTYGMIIDALCKDGMTTE 1103
Query: 204 AEKSFLEMIEKGHKPSQVSFRRI-KALMELANKQEALQ 240
A F EMI G P V + + L +EAL+
Sbjct: 1104 ALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALE 1141
>gi|297816088|ref|XP_002875927.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321765|gb|EFH52186.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 657
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 127/255 (49%), Gaps = 14/255 (5%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G +P++ +YN L+ CK+ +V+ A K++ +M ++ P+ +SYT++I + VG
Sbjct: 171 MKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGM 230
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ R + + + P + YNA I C + + LM EMVEKG+SPN +Y+
Sbjct: 231 VKEGRQLAERFE-----PVVSVYNALINGLCKERDYKGGVELMSEMVEKGISPNVISYST 285
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
S + +++L +M+ GC PN + LVK C + AL +WN M+ +G
Sbjct: 286 LINELSNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMI-RG 344
Query: 181 FG--SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEA 238
FG ++ + L C G + +A FL M E G P + R +L+ K+ +
Sbjct: 345 FGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSP---NIRTYGSLINGFTKRGS 401
Query: 239 LQN---LSNKMALFG 250
L+ + NKM G
Sbjct: 402 LEGAVYIWNKMLTSG 416
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 104/227 (45%), Gaps = 1/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+R G++P++V+YN L+ +C ++KA + M + SP++ +Y S+I G G
Sbjct: 342 IRGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGS 401
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A + +M GC P+ Y + + C + ++A L++ M ++ +P+ T+N
Sbjct: 402 LEGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNA 461
Query: 121 FFRVFYWSNDLRSSWNLYCRM-MGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
F + + L + ++ +M C PN + L+ + ++E A L ++ +
Sbjct: 462 FIKGLCDAGRLDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMR 521
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G + L C+ G A + +M+ G P +++ I
Sbjct: 522 GVEWSTSTYNTLLHGSCNAGLPGIALQLVGKMMVNGKSPDEITMNMI 568
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 99/232 (42%), Gaps = 9/232 (3%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
K +++ +I D QV+ ++++M+ + + S+I VG ++A +
Sbjct: 72 KHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVE 131
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
+ +KE+GC P YN + R++ + +M G PN TYN+ +
Sbjct: 132 MFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALC 191
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+N + + L M GC PN S ++ +C E+ + + + F +
Sbjct: 192 KNNKVDGAKKLLVEMSNKGCCPNAVSYTTVISSMC------EVGMVKEGRQLAERFEPVV 245
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQE 237
V + L + LC + EM+EKG P+ +S+ + + EL+N +
Sbjct: 246 SVYNALINGLCKERDYKGGVELMSEMVEKGISPNVISYSTL--INELSNSGQ 295
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/288 (20%), Positives = 109/288 (37%), Gaps = 74/288 (25%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKM------------------------ 36
M E G+ P+++SY+ LI+ Q+E A+ ++ +M
Sbjct: 271 MVEKGISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGT 330
Query: 37 ------------RDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYN 84
R + P+V++Y +++ G G DKA V M+E GC P+ Y
Sbjct: 331 TFDALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYG 390
Query: 85 AAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGT 144
+ I + L A + ++M+ G PN Y + + + +L M
Sbjct: 391 SLINGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKE 450
Query: 145 GCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEA 204
C P+ + F ++I LCD G+L A
Sbjct: 451 NCAPSVPT----------------------------FNAFI-------KGLCDAGRLDWA 475
Query: 205 EKSFLEMIEKGHK--PSQVSFRRIKALMELANKQEALQNLSNKMALFG 250
EK F +M E+ ++ P+ V++ + + AN+ E L+ ++ + G
Sbjct: 476 EKVFRQM-EQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRG 522
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 46/97 (47%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P+IV+YN L+D K ++E+AY + ++ + +Y +++ G G P A +
Sbjct: 490 PNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSTSTYNTLLHGSCNAGLPGIALQL 549
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMD 104
+ +M G PD N I YC + A ++D
Sbjct: 550 VGKMMVNGKSPDEITMNMIILAYCKQGKAERAVQMLD 586
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 55/119 (46%), Gaps = 1/119 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDE-DISPDVISYTSIIGGLGLVGQPDKARD 66
P + ++N I C +++ A K+ +M + P++++Y ++ GL + ++A
Sbjct: 454 PSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYG 513
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+ +E+ G + YN + C A A L+ +M+ G SP+ T N+ +
Sbjct: 514 LTREIFMRGVEWSTSTYNTLLHGSCNAGLPGIALQLVGKMMVNGKSPDEITMNMIILAY 572
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMR--DEDISPDVISYTSIIGGL 55
G PD ++ N +I YCK + E+A ++++ + PDVISYT++I GL
Sbjct: 557 GKSPDEITMNMIILAYCKQGKAERAVQMLDLVSCGRRKWRPDVISYTNVIWGL 609
>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
Length = 687
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 124/252 (49%), Gaps = 12/252 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E + PD+V+YN LI+ + K+ + +A ++ ++M I P+ I+Y+S+I G +
Sbjct: 316 MLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNR 375
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A + M GC P+ +N I YC AKR+ D L+ EM E GL + TTYN
Sbjct: 376 LDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE-- 178
FY DL ++ +L M+ +G P+ +C L+ K++ AL+++ M +
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSK 495
Query: 179 ---------KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKA 228
G + ++L L + GK +EAE+ + EM +G P +++ I
Sbjct: 496 KDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 555
Query: 229 LMELANKQEALQ 240
L + + EA Q
Sbjct: 556 LCKQSRLDEATQ 567
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 117/247 (47%), Gaps = 1/247 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRD-EDISPDVISYTSIIGGLGLVG 59
M E G++P ++Y ++D CK A ++ KM + I P+V+ Y++II L G
Sbjct: 210 MMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDG 269
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ A+++ EM+E G +PD YN+ I +C + R DA L+ EM+E+ +SP+ TYN
Sbjct: 270 RHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYN 329
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
F + LY M+ G +PNT + ++ +Q +++ A ++ M K
Sbjct: 330 ALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATK 389
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
G ++ + L D C ++ + + EM E G ++ + L A
Sbjct: 390 GCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAA 449
Query: 240 QNLSNKM 246
+L +M
Sbjct: 450 LDLLQEM 456
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 105/217 (48%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ P++V Y+ +ID CKD + A + +M+++ I PD+ +Y S+I G G+ A
Sbjct: 251 IIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAE 310
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+L+EM E PD YNA I + + +A L DEM+ +G+ PN TY+ F
Sbjct: 311 QLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGF 370
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
N L ++ +++ M GC PN + L+ ++++ ++L ++M E G +
Sbjct: 371 CKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADT 430
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
+ L +G L A EMI G P V+
Sbjct: 431 TTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVT 467
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 111/227 (48%), Gaps = 1/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E +P++V++ L++ C++ ++ +A ++++M ++ + P I+Y +I+ G+ G
Sbjct: 175 MFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGD 234
Query: 61 PDKARDVLKEMKEYG-CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
A ++L++M+E P+ Y+A I + C R DA L EM EKG+ P+ TYN
Sbjct: 235 TVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYN 294
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
F S + L M+ P+ + L+ ++ K A +L+++M+ +
Sbjct: 295 SMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPR 354
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G + + D C +L AE F M KG P+ ++F +
Sbjct: 355 GIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTL 401
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 104/228 (45%), Gaps = 3/228 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++ DI S+N LI +C ++ A K+ + PDV+++T+++ GL + +
Sbjct: 105 MERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDR 164
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A D +M E C P+ + + C R+ +A L+D M+E GL P TY
Sbjct: 165 VSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGT 224
Query: 121 FFRVFYWSNDLRSSWNLYCRMMG-TGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVE 178
D S+ NL +M + +PN ++ LCK + A L+ +M E
Sbjct: 225 IVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSD-AQNLFTEMQE 283
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
KG + + + C G+ +AE+ EM+E+ P V++ +
Sbjct: 284 KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNAL 331
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 92/191 (48%), Gaps = 11/191 (5%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKA---YKIVEKMRDE--------DISPDVISYT 49
M G+ PDIV+ + L+D C + +++ A +K+++K + + + PDV +Y
Sbjct: 456 MISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYN 515
Query: 50 SIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEK 109
+I GL G+ +A ++ +EM G PD Y++ I C RL +A+ + D M K
Sbjct: 516 ILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSK 575
Query: 110 GLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIA 169
SPN T+ + + + L+C M G + N + + L+ ++ + A
Sbjct: 576 SFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGA 635
Query: 170 LQLWNDMVEKG 180
L ++ +M+ G
Sbjct: 636 LDIFQEMISSG 646
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 72/146 (49%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV+PD+ +YN LI + + +A ++ E+M I PD I+Y+S+I GL + D+A
Sbjct: 506 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ M P+ + I YC A R+ D L EM +G+ NA TY
Sbjct: 566 TQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICG 625
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNT 150
F ++ + +++ M+ +G P+T
Sbjct: 626 FRKVGNINGALDIFQEMISSGVYPDT 651
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 115/283 (40%), Gaps = 48/283 (16%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P+++++N LID YC ++++ +++ +M + + D +Y ++I G LVG
Sbjct: 386 MATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGD 445
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDA--------------------- 99
+ A D+L+EM G PD + + C +L+DA
Sbjct: 446 LNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFN 505
Query: 100 -------------SGLMDE------------MVEKGLSPNATTYNLFFRVFYWSNDLRSS 134
SGL++E M +G+ P+ TY+ + L +
Sbjct: 506 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565
Query: 135 WNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDL 194
++ M PN + L+ + +V+ L+L+ +M +G + + L
Sbjct: 566 TQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICG 625
Query: 195 LCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQE 237
+G + A F EMI G P ++ R + L L +K+E
Sbjct: 626 FRKVGNINGALDIFQEMISSGVYPDTITIRNM--LTGLWSKEE 666
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 93/224 (41%), Gaps = 1/224 (0%)
Query: 24 RQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAY 83
+ +E A + M P V+ + ++G + + +PD + ++M+ D ++
Sbjct: 58 KGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSF 117
Query: 84 NAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMG 143
N I+ +C +L A ++ + GL P+ T+ + + + + + +M
Sbjct: 118 NILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFE 177
Query: 144 TGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVE 203
T C PN + L+ R+ ++ A+ L + M+E G + + D +C G V
Sbjct: 178 TTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVS 237
Query: 204 AEKSFLEMIEKGH-KPSQVSFRRIKALMELANKQEALQNLSNKM 246
A +M E H P+ V + I + + QNL +M
Sbjct: 238 ALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEM 281
>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 124/252 (49%), Gaps = 12/252 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E + PD+V+YN LI+ + K+ + +A ++ ++M I P+ I+Y+S+I G +
Sbjct: 316 MLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNR 375
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A + M GC P+ +N I YC AKR+ D L+ EM E GL + TTYN
Sbjct: 376 LDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE-- 178
FY DL ++ +L M+ +G P+ +C L+ K++ AL+++ M +
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSK 495
Query: 179 ---------KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKA 228
G + ++L L + GK +EAE+ + EM +G P +++ I
Sbjct: 496 KDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 555
Query: 229 LMELANKQEALQ 240
L + + EA Q
Sbjct: 556 LCKQSRLDEATQ 567
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 117/247 (47%), Gaps = 1/247 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRD-EDISPDVISYTSIIGGLGLVG 59
M E G++P ++Y ++D CK A ++ KM + I P+V+ Y++II L G
Sbjct: 210 MMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDG 269
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ A+++ EM+E G +PD YN+ I +C + R DA L+ EM+E+ +SP+ TYN
Sbjct: 270 RHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYN 329
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
F + LY M+ G +PNT + ++ +Q +++ A ++ M K
Sbjct: 330 ALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATK 389
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
G ++ + L D C ++ + + EM E G ++ + L A
Sbjct: 390 GCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAA 449
Query: 240 QNLSNKM 246
+L +M
Sbjct: 450 LDLLQEM 456
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 105/217 (48%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ P++V Y+ +ID CKD + A + +M+++ I PD+ +Y S+I G G+ A
Sbjct: 251 IIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAE 310
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+L+EM E PD YNA I + + +A L DEM+ +G+ PN TY+ F
Sbjct: 311 QLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGF 370
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
N L ++ +++ M GC PN + L+ ++++ ++L ++M E G +
Sbjct: 371 CKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADT 430
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
+ L +G L A EMI G P V+
Sbjct: 431 TTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVT 467
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 112/227 (49%), Gaps = 1/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E +P++V++ L++ C++ ++ +A ++++M ++ + P I+Y +I+ G+ +G
Sbjct: 175 MFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGD 234
Query: 61 PDKARDVLKEMKEYG-CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
A D+L++M+E P+ Y+A I + C R DA L EM EKG+ P+ TYN
Sbjct: 235 TVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYN 294
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
F S + L M+ P+ + L+ ++ K A +L+++M+ +
Sbjct: 295 SMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPR 354
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G + + D C +L AE F M KG P+ ++F +
Sbjct: 355 GIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTL 401
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 103/228 (45%), Gaps = 3/228 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++ DI S+ LI +C ++ A K+ + PDV+++ +++ GL + +
Sbjct: 105 MERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDR 164
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++ +M E C P+ + + C R+ +A L+D M+E GL P TY
Sbjct: 165 VSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGT 224
Query: 121 FFRVFYWSNDLRSSWNLYCRMMG-TGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVE 178
D S+ +L +M + +PN ++ LCK + A L+ +M E
Sbjct: 225 IVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSD-AQNLFTEMQE 283
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
KG + + + C G+ +AE+ EM+E+ P V++ +
Sbjct: 284 KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNAL 331
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 92/191 (48%), Gaps = 11/191 (5%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKA---YKIVEKMRDE--------DISPDVISYT 49
M G+ PDIV+ + L+D C + +++ A +K+++K + + + PDV +Y
Sbjct: 456 MISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYN 515
Query: 50 SIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEK 109
+I GL G+ +A ++ +EM G PD Y++ I C RL +A+ + D M K
Sbjct: 516 ILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSK 575
Query: 110 GLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIA 169
SPN T+ + + + L+C M G + N + + L+ ++ + A
Sbjct: 576 SFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGA 635
Query: 170 LQLWNDMVEKG 180
L ++ +M+ G
Sbjct: 636 LDIFQEMISSG 646
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 72/146 (49%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV+PD+ +YN LI + + +A ++ E+M I PD I+Y+S+I GL + D+A
Sbjct: 506 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ M P+ + I YC A R+ D L EM +G+ NA TY
Sbjct: 566 TQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICG 625
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNT 150
F ++ + +++ M+ +G P+T
Sbjct: 626 FRKVGNINGALDIFQEMISSGVYPDT 651
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 115/283 (40%), Gaps = 48/283 (16%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P+++++N LID YC ++++ +++ +M + + D +Y ++I G LVG
Sbjct: 386 MATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGD 445
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDA--------------------- 99
+ A D+L+EM G PD + + C +L+DA
Sbjct: 446 LNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFN 505
Query: 100 -------------SGLMDE------------MVEKGLSPNATTYNLFFRVFYWSNDLRSS 134
SGL++E M +G+ P+ TY+ + L +
Sbjct: 506 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565
Query: 135 WNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDL 194
++ M PN + L+ + +V+ L+L+ +M +G + + L
Sbjct: 566 TQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICG 625
Query: 195 LCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQE 237
+G + A F EMI G P ++ R + L L +K+E
Sbjct: 626 FRKVGNINGALDIFQEMISSGVYPDTITIRNM--LTGLWSKEE 666
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 91/218 (41%), Gaps = 3/218 (1%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P +V + L+ V + + + + +KM + I D+ S+T +I + A
Sbjct: 77 PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALST 136
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
++ + G +PD +N + C+ R+ +A L +M E PN T+
Sbjct: 137 FGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCR 196
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVE-KGFGSYI 185
+ + L RMM G P + +V +CK + V AL L M E +
Sbjct: 197 EGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVS-ALDLLRKMEEISHIIPNV 255
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + D LC G+ +A+ F EM EKG P ++
Sbjct: 256 VIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTY 293
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 95/224 (42%), Gaps = 1/224 (0%)
Query: 24 RQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAY 83
+ +E A + M P V+ + ++G + + +PD + ++M+ D ++
Sbjct: 58 KGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSF 117
Query: 84 NAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMG 143
I+ +C +L A ++ + GL P+ T+N + + + NL+ +M
Sbjct: 118 TILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFE 177
Query: 144 TGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVE 203
T C PN + L+ R+ ++ A+ L + M+E G + + D +C +G V
Sbjct: 178 TTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVS 237
Query: 204 AEKSFLEMIEKGH-KPSQVSFRRIKALMELANKQEALQNLSNKM 246
A +M E H P+ V + I + + QNL +M
Sbjct: 238 ALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEM 281
>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
Length = 659
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 124/228 (54%), Gaps = 4/228 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E G+ PD V+YN L++ CK Q+E+ K++E+M + PD SY +++ L G+
Sbjct: 188 MKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGK 247
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A +L++M E C PD YN+ + +C ++ +A L+++MV + +P TY
Sbjct: 248 YEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTT 307
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPN--TQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
F ++ L ++ + M G P+ T +C+ L LCK K+E A +L MVE
Sbjct: 308 LIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCL-LDGLCKAG-KLEEAHELLEVMVE 365
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
K ++ +L + LC +GK+ +A M+E+G +P+ V+F +
Sbjct: 366 KDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTM 413
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 115/223 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E PD+++Y LI C+ +++A K++EKM++ ++PD ++Y +++ GL Q
Sbjct: 153 MLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQ 212
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++ +L+EM E G PD +YN + C + + +A ++++M+EK P+ TYN
Sbjct: 213 LEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNS 272
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + + + L M+G C P + L+ R +++ A ++ DM + G
Sbjct: 273 LMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAG 332
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + L D LC GKL EA + M+EK P V++
Sbjct: 333 ISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTY 375
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 111/224 (49%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
+M P +Y LI C+ +++++AY+++++M +D PD Y +I GL +G+ D
Sbjct: 85 KMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKID 144
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
AR+VLK M E C PD Y + I C L +A LM++M E GL+P+ YN
Sbjct: 145 AARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALL 204
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
N L L M+ G P+T S +V K E A ++ M+EK G
Sbjct: 205 NGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCG 264
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ + L D C + K+ EAE+ +M+ + P+ +++ +
Sbjct: 265 PDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTL 308
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 112/227 (49%), Gaps = 2/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G +PD SYN ++ C+ + E+A KI+EKM ++ PDV++Y S++ G V +
Sbjct: 223 MVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSK 282
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A +L++M C P Y I + A RL DA +M++M + G+SP+ TYN
Sbjct: 283 MDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNC 342
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+ L + L M+ C P+ + LV LCK KV+ A L M+E+
Sbjct: 343 LLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLG-KVDDARLLLEMMLER 401
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G ++ + + D C GK+ E K M E P V++ +
Sbjct: 402 GCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTL 448
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 123/223 (55%), Gaps = 6/223 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ PD+V+YNCL+D CK ++E+A++++E M ++D +PDV++Y+ ++ GL +G+
Sbjct: 328 MFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGK 387
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D AR +L+ M E GC P+ +N I +C A ++ + +++ M E +P+ TY+
Sbjct: 388 VDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYST 447
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ +N ++ ++ + G P+ S +++ KVE A ++ + M ++G
Sbjct: 448 LIDGYCKANRMQDAFAIL------GISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQG 501
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ LCD+ + EA K M E+G +P+ ++
Sbjct: 502 CPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTY 544
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 114/223 (51%), Gaps = 6/223 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E+ PD+V+Y+ LID YCK +++ A+ I+ ISPD SY+S++ GL G+
Sbjct: 433 MKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL------GISPDKASYSSMLEGLCSTGK 486
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A++V+ M + GC P ++ Y I C +R +A ++ M E+G PN TY++
Sbjct: 487 VEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSI 546
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + N+ M+ GC+P+ + L+ + K++ A Q + M + G
Sbjct: 547 LINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSG 606
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
L ++L C G + +A + M+EKG P ++
Sbjct: 607 CEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATY 649
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 106/240 (44%), Gaps = 2/240 (0%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
KP +Y LI + + + +I +M SPDVI++ +I+ +G D+A
Sbjct: 21 KPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRALS 80
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
+ + C P A Y I C +R+ +A L+DEM++K P+A YN
Sbjct: 81 HFR--GKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLC 138
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+ ++ N+ M+ C+P+ + L+ C + ++ A +L M E G +
Sbjct: 139 KMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTV 198
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKM 246
+ L + LC +L E K EM+E G +P S+ + A + + K E + KM
Sbjct: 199 AYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKM 258
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 113/236 (47%), Gaps = 7/236 (2%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P +++Y LI + + ++ AY+++E M ISPD+++Y ++ GL G+ ++A ++
Sbjct: 300 PTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHEL 359
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L+ M E C PD Y+ + C ++ DA L++ M+E+G PN T+N F
Sbjct: 360 LEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCK 419
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ + + M C P+ + L+ + +++ A + +K S +L
Sbjct: 420 AGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAILGISPDKASYSSML- 478
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNL 242
+ LC GK+ EA++ M ++G P+ + I L ++ EAL+ L
Sbjct: 479 -----EGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKML 529
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 53/89 (59%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G PD+ +Y LID +CK +++ AY+ + MRD PD ++Y +I G G
Sbjct: 567 MLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGN 626
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRN 89
+KA +V++ M E GC PDAA Y + +R+
Sbjct: 627 VEKAIEVMQLMLEKGCNPDAATYFSLMRS 655
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 36/55 (65%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGL 55
MR+ G +PD ++YN LI +C+ VEKA ++++ M ++ +PD +Y S++ L
Sbjct: 602 MRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATYFSLMRSL 656
>gi|357501695|ref|XP_003621136.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496151|gb|AES77354.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 821
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 122/257 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G KPD VS+ ID YCK + A +++E+M V + T++I G GLV
Sbjct: 242 MVKRGFKPDSVSFGIRIDAYCKKGRFGDALRLLEEMESRKFVVSVETITTLIHGAGLVQN 301
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
P KA + E+ D+ YNA I + + A LMD M+EK + P+ TY+
Sbjct: 302 PGKAWQLFNEIPLRNLVVDSGVYNALITTLVRNRDVVSALSLMDGMIEKQILPDGVTYHT 361
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F S + LY +M +P T++ + L+K +++++L LWN +VEKG
Sbjct: 362 IFLGLMKSRGIEGVSELYQKMTKRKFVPKTRTVVVLMKYFCHNSRLDLSLSLWNYLVEKG 421
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ D+L LC G + EA + +E+G S +F ++ L++ + + L+
Sbjct: 422 HCPHAHALDLLVTGLCSRGLVQEAFSCSKQTLERGRYISSTAFLMLERLLKQSRDVDKLK 481
Query: 241 NLSNKMALFGPSMIPKR 257
L + + P R
Sbjct: 482 ELDQMIKKLRSVLPPSR 498
>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
Length = 924
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 125/237 (52%), Gaps = 6/237 (2%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD+VSYN +I+ + + QV+KAY + +M +SPDV++Y +II GL + D+A DV
Sbjct: 191 PDVVSYNIVINGFFNEGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDV 247
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
++M E G P+ YN I C A+ + A G+ +MV+KG+ P+ TYN
Sbjct: 248 FQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCK 307
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+ + + ++ +M+ G P+ + ++ LCK Q ++ A ++ M++KG L
Sbjct: 308 AQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQ-AIDKAEGVFQQMIDKGVKPDNL 366
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEALQNL 242
++ D LC + AE F +MI+KG KP+ ++ I + +E +Q +
Sbjct: 367 TYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRI 423
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 108/219 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E GVKP+ V+YN +ID CK ++V+ A + +KM D+ + P ++Y +II GL
Sbjct: 251 MVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQA 310
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A V ++M + G PD YN I C A+ + A G+ +M++KG+ P+ TY +
Sbjct: 311 VDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTI 370
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + ++ +M+ G PN + L+ + E +Q +M
Sbjct: 371 IIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHD 430
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
+ +L D LC GK EA F MI KG KPS
Sbjct: 431 LEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPS 469
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 116/230 (50%), Gaps = 8/230 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKM---RDEDISPDVISYTSIIGGLGL 57
M E+G + +VSYN L+ C R+ E+A +++ M +D SPDV+SY +I G
Sbjct: 146 MPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFN 205
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
GQ DKA + EM G PD YN I C A+ + A + +MVEKG+ PN T
Sbjct: 206 EGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVT 262
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLP-NTQSCMFLVKLCKRQEKVEIALQLWNDM 176
YN + ++ + ++ +M+ G P N + LCK Q V+ A ++ M
Sbjct: 263 YNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQ-AVDRAEGVFQQM 321
Query: 177 VEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+++G + + + D LC + +AE F +MI+KG KP +++ I
Sbjct: 322 IDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTII 371
Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 117/244 (47%), Gaps = 4/244 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GVKPD ++Y +ID CK + V++A + ++M D+ + P+ +Y +I G GQ
Sbjct: 356 MIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQ 415
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++ +KEM + PD Y + C + +A L D M+ KG+ P+ T Y +
Sbjct: 416 WEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGI 475
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEI--ALQLWNDMVE 178
+ L +L M+ G PN + +F +C ++ I + ++ M +
Sbjct: 476 MLHGYGKKGALSEMHDLLNLMVANGISPNHR--IFNTVICAYAKRAMIDEVMHIFIKMKQ 533
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEA 238
+G ++ L D LC +G++ +A F +MI +G P+ V F + + +K E
Sbjct: 534 QGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEK 593
Query: 239 LQNL 242
++ L
Sbjct: 594 VEEL 597
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 108/213 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G+ P++V+Y LID CK +V+ A +M +E ++P+ + + S++ GL V +
Sbjct: 531 MKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDK 590
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+K ++ EM G PD +N + N C R+ +A L+D MV GL P+ +YN
Sbjct: 591 WEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNT 650
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+++ + + L M+ G PN S L+ + +++ A L+ +M+ KG
Sbjct: 651 LIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKG 710
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIE 213
+ + + + L G+ EA + ++ MI+
Sbjct: 711 VTPGVETYNTILNGLFRSGRFSEARELYVNMIK 743
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 111/236 (47%), Gaps = 1/236 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV P+ V +N L+ C + EK ++ +M ++ I PD++ + +++ L G+ +A
Sbjct: 570 GVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEA 629
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
R ++ M G PD +YN I +C A R+ +A L+D MV GL PN +YN
Sbjct: 630 RRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHG 689
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + + +++ L+ M+ G P ++ ++ R + A +L+ +M++
Sbjct: 690 YCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWS 749
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEAL 239
I ++ D C EA K F + + ++F I L + K++A+
Sbjct: 750 ICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAM 805
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 109/226 (48%), Gaps = 9/226 (3%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
V PD +Y+ +I +C+ ++E + + D I ++ GL + +A
Sbjct: 80 VAPDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAM 139
Query: 66 DV-LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMV---EKGLSPNATTYNLF 121
V L++M E GC +YN ++ C +R +A L+ MV + SP+ +YN+
Sbjct: 140 HVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIV 199
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKG 180
F+ + +++L+ M G P+ + ++ LCK QE V+ A ++ MVEKG
Sbjct: 200 INGFFNEGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQE-VDRAEDVFQQMVEKG 255
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + + D LC ++ AE F +M++KG KPS V++ I
Sbjct: 256 VKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTI 301
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 116/229 (50%), Gaps = 9/229 (3%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKA-YKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
+ G + D + N L+ C ++V +A + ++ +M + V+SY +++ GL +
Sbjct: 112 KTGWRVDDIVVNQLLKGLCDTKRVGEAMHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRA 171
Query: 62 DKARDVLKEM---KEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
++AR++L M ++ C PD +YN I + ++ A L EM G+SP+ TY
Sbjct: 172 EEARELLHMMVDGQDSSCSPDVVSYNIVINGFFNEGQVDKAYSLFLEM---GVSPDVVTY 228
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMV 177
N + ++ + +++ +M+ G PN + ++ LCK QE V++A ++ MV
Sbjct: 229 NTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQE-VDMAEGVFQKMV 287
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+KG + + + D LC + AE F +MI++G KP V++ I
Sbjct: 288 DKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTI 336
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 98/222 (44%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ P+ +N +I Y K +++ I KM+ + +SP+V++Y ++I L +G+ D A
Sbjct: 500 GISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDA 559
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+M G P+ +N+ + C + L EM+ +G+ P+ +N
Sbjct: 560 VLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCN 619
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + L M+ G P+ S L+ +++ A++L + MV G
Sbjct: 620 LCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPN 679
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
I+ + L C G++ A F EM+ KG P ++ I
Sbjct: 680 IVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTI 721
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 101/216 (46%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
MG+KPD++SYN LID +C ++++A K+++ M + P+++SY +++ G G+ D
Sbjct: 639 MGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDN 698
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
A + +EM G P YN + + R +A L M++ + TY++
Sbjct: 699 AYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILD 758
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
F +N ++ ++ + + + ++ + + E A+ L+ + G
Sbjct: 759 GFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVP 818
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
++ ++ + L + G L E + F M + G P+
Sbjct: 819 SVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPN 854
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/249 (20%), Positives = 106/249 (42%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+KP+IVSYN L+ YCK +++ AY + +M + ++P V +Y +I+ GL G+
Sbjct: 671 MVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGR 730
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR++ M + Y+ + +C +A + + L + T+N+
Sbjct: 731 FSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNI 790
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + +L+ + G +P+ + + + + +E L++ M + G
Sbjct: 791 MIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSG 850
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ + L L D G++ A ++ EK + + +L Q+ +
Sbjct: 851 TAPNSHMLNALIRKLLDRGEIPRAGAYLSKLDEKNFSLEASTTSMLISLFSREEYQQHAK 910
Query: 241 NLSNKMALF 249
+L K F
Sbjct: 911 SLPEKCRFF 919
>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 124/252 (49%), Gaps = 12/252 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E + PD+V+YN LI+ + K+ + +A ++ ++M I P+ I+Y+S+I G +
Sbjct: 316 MLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNR 375
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A + M GC P+ +N I YC AKR+ D L+ EM E GL + TTYN
Sbjct: 376 LDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE-- 178
FY DL ++ +L M+ +G P+ +C L+ K++ AL+++ M +
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSK 495
Query: 179 ---------KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKA 228
G + ++L L + GK +EAE+ + EM +G P +++ I
Sbjct: 496 KDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 555
Query: 229 LMELANKQEALQ 240
L + + EA Q
Sbjct: 556 LCKQSRLDEATQ 567
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 117/247 (47%), Gaps = 1/247 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRD-EDISPDVISYTSIIGGLGLVG 59
M E G++P ++Y ++D CK A ++ KM + I P+V+ Y++II L G
Sbjct: 210 MMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDG 269
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ A+++ EM+E G +PD YN+ I +C + R DA L+ EM+E+ +SP+ TYN
Sbjct: 270 RHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYN 329
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
F + LY M+ G +PNT + ++ +Q +++ A ++ M K
Sbjct: 330 ALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATK 389
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
G ++ + L D C ++ + + EM E G ++ + L A
Sbjct: 390 GCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAA 449
Query: 240 QNLSNKM 246
+L +M
Sbjct: 450 LDLLQEM 456
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 105/217 (48%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ P++V Y+ +ID CKD + A + +M+++ I PD+ +Y S+I G G+ A
Sbjct: 251 IIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAE 310
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+L+EM E PD YNA I + + +A L DEM+ +G+ PN TY+ F
Sbjct: 311 QLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGF 370
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
N L ++ +++ M GC PN + L+ ++++ ++L ++M E G +
Sbjct: 371 CKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADT 430
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
+ L +G L A EMI G P V+
Sbjct: 431 TTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVT 467
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 111/227 (48%), Gaps = 1/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E +P++V++ L++ C++ ++ +A ++++M ++ + P I+Y +I+ G+ G
Sbjct: 175 MFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGD 234
Query: 61 PDKARDVLKEMKEYG-CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
A ++L++M+E P+ Y+A I + C R DA L EM EKG+ P+ TYN
Sbjct: 235 TVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYN 294
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
F S + L M+ P+ + L+ ++ K A +L+++M+ +
Sbjct: 295 SMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPR 354
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G + + D C +L AE F M KG P+ ++F +
Sbjct: 355 GIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTL 401
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 103/228 (45%), Gaps = 3/228 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++ DI S+ LI +C ++ A K+ + PDV+++ +++ GL + +
Sbjct: 105 MERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDR 164
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++ +M E C P+ + + C R+ +A L+D M+E GL P TY
Sbjct: 165 VSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGT 224
Query: 121 FFRVFYWSNDLRSSWNLYCRMMG-TGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVE 178
D S+ NL +M + +PN ++ LCK + A L+ +M E
Sbjct: 225 IVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSD-AQNLFTEMQE 283
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
KG + + + C G+ +AE+ EM+E+ P V++ +
Sbjct: 284 KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNAL 331
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 92/191 (48%), Gaps = 11/191 (5%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKA---YKIVEKMRDE--------DISPDVISYT 49
M G+ PDIV+ + L+D C + +++ A +K+++K + + + PDV +Y
Sbjct: 456 MISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYN 515
Query: 50 SIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEK 109
+I GL G+ +A ++ +EM G PD Y++ I C RL +A+ + D M K
Sbjct: 516 ILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSK 575
Query: 110 GLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIA 169
SPN T+ + + + L+C M G + N + + L+ ++ + A
Sbjct: 576 SFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGA 635
Query: 170 LQLWNDMVEKG 180
L ++ +M+ G
Sbjct: 636 LDIFQEMISSG 646
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 72/146 (49%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV+PD+ +YN LI + + +A ++ E+M I PD I+Y+S+I GL + D+A
Sbjct: 506 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ M P+ + I YC A R+ D L EM +G+ NA TY
Sbjct: 566 TQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICG 625
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNT 150
F ++ + +++ M+ +G P+T
Sbjct: 626 FRKVGNINGALDIFQEMISSGVYPDT 651
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 115/283 (40%), Gaps = 48/283 (16%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P+++++N LID YC ++++ +++ +M + + D +Y ++I G LVG
Sbjct: 386 MATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGD 445
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDA--------------------- 99
+ A D+L+EM G PD + + C +L+DA
Sbjct: 446 LNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFN 505
Query: 100 -------------SGLMDE------------MVEKGLSPNATTYNLFFRVFYWSNDLRSS 134
SGL++E M +G+ P+ TY+ + L +
Sbjct: 506 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565
Query: 135 WNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDL 194
++ M PN + L+ + +V+ L+L+ +M +G + + L
Sbjct: 566 TQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICG 625
Query: 195 LCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQE 237
+G + A F EMI G P ++ R + L L +K+E
Sbjct: 626 FRKVGNINGALDIFQEMISSGVYPDTITIRNM--LTGLWSKEE 666
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 97/224 (43%), Gaps = 9/224 (4%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P +V + L+ V + + + + +KM + I D+ S+T +I + A
Sbjct: 77 PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALST 136
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
++ + G +PD +N + C+ R+ +A L +M E PN T+
Sbjct: 137 FGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCR 196
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+ + L RMM G P + +V +CK+ + V AL L M E S+I+
Sbjct: 197 EGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVS-ALNLLRKMEEV---SHII 252
Query: 187 VSDVLF----DLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ V++ D LC G+ +A+ F EM EKG P ++ +
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSM 296
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 94/224 (41%), Gaps = 1/224 (0%)
Query: 24 RQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAY 83
+ +E A + M P V+ + ++G + + +PD + ++M+ D ++
Sbjct: 58 KGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSF 117
Query: 84 NAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMG 143
I+ +C +L A ++ + GL P+ T+N + + + NL+ +M
Sbjct: 118 TILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFE 177
Query: 144 TGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVE 203
T C PN + L+ R+ ++ A+ L + M+E G + + D +C G V
Sbjct: 178 TTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVS 237
Query: 204 AEKSFLEMIEKGH-KPSQVSFRRIKALMELANKQEALQNLSNKM 246
A +M E H P+ V + I + + QNL +M
Sbjct: 238 ALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEM 281
>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
thaliana]
Length = 1184
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 107/223 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ PD V Y LID +CK + A K +M DI+PDV++YT+II G +G
Sbjct: 785 MIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGD 844
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + EM G PD+ + I YC A ++DA + + M++ G SPN TY
Sbjct: 845 MVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTT 904
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
DL S+ L M G PN + +V + +E A++L + G
Sbjct: 905 LIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAG 964
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + L D C G++ +A++ EM+ KG +P+ V+F
Sbjct: 965 LNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTF 1007
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 116/215 (53%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++G++P+I +YN +++ CK +E+A K+V + ++ D ++YT+++ G+
Sbjct: 925 MWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGE 984
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA+++LKEM G P +N + +C+ L D L++ M+ KG++PNATT+N
Sbjct: 985 MDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNS 1044
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + N+L+++ +Y M G P+ ++ LVK + ++ A L+ +M KG
Sbjct: 1045 LVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKG 1104
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
F + VL K +EA + F +M +G
Sbjct: 1105 FSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREG 1139
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 116/241 (48%), Gaps = 1/241 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD++SY+ +++ YC+ +++K +K++E M+ + + P+ Y SIIG L + +
Sbjct: 715 MELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICK 774
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + EM G PD Y I +C +R AS EM + ++P+ TY
Sbjct: 775 LAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTA 834
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F D+ + L+ M G P++ + L+ + ++ A ++ N M++ G
Sbjct: 835 IISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG 894
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI-KALMELANKQEAL 239
++ L D LC G L A + EM + G +P+ ++ I L + N +EA+
Sbjct: 895 CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 954
Query: 240 Q 240
+
Sbjct: 955 K 955
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 99/193 (51%), Gaps = 4/193 (2%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ D V+Y L+D YCK +++KA +I+++M + + P ++++ ++ G L G +
Sbjct: 964 GLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDG 1023
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+L M G P+A +N+ ++ YCI L+ A+ + +M +G+ P+ TY +
Sbjct: 1024 EKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKG 1083
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ +++ +W L+ M G G + + L+K +++K A ++++ M +G +
Sbjct: 1084 HCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAA- 1142
Query: 185 ILVSDVLFDLLCD 197
+FD D
Sbjct: 1143 ---DKEIFDFFSD 1152
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 110/222 (49%), Gaps = 2/222 (0%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E+GV ++ SYN +I C+ ++++A+ ++ M + +PDVISY++++ G G+ D
Sbjct: 682 EVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELD 741
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
K +++ MK G P++ Y + I C +L +A EM+ +G+ P+ Y
Sbjct: 742 KVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLI 801
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGF 181
F D+R++ + M P+ + ++ C+ + VE A +L+++M KG
Sbjct: 802 DGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVE-AGKLFHEMFCKGL 860
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ L + C G + +A + MI+ G P+ V++
Sbjct: 861 EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTY 902
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 112/250 (44%), Gaps = 6/250 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G+KP+ Y +I + C+ ++ +A + +M + I PD + YT++I G G
Sbjct: 750 MKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGD 809
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A EM PD Y A I +C + +A L EM KGL P++ T+
Sbjct: 810 IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTE 869
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+ + ++ ++ ++ M+ GC PN + L+ LCK + ++ A +L ++M +
Sbjct: 870 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD-LDSANELLHEMWKI 928
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALM----ELANK 235
G I + + + LC G + EA K E G V++ + E+
Sbjct: 929 GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA 988
Query: 236 QEALQNLSNK 245
QE L+ + K
Sbjct: 989 QEILKEMLGK 998
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 83/184 (45%), Gaps = 2/184 (1%)
Query: 44 DVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLM 103
+V SY +I + +G+ +A +L M+ G PD +Y+ + YC L L+
Sbjct: 688 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 747
Query: 104 DEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKR 162
+ M KGL PN+ Y + L + + M+ G LP+T L+ CKR
Sbjct: 748 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKR 807
Query: 163 QEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
+ + A + + +M + +L + C +G +VEA K F EM KG +P V+
Sbjct: 808 GD-IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVT 866
Query: 223 FRRI 226
F +
Sbjct: 867 FTEL 870
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 71/160 (44%)
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
V +E E G + A+YN I C R+++A L+ M KG +P+ +Y+ +
Sbjct: 676 VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYC 735
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+L W L M G PN+ ++ L R K+ A + +++M+ +G +
Sbjct: 736 RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV 795
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
V L D C G + A K F EM + P +++ I
Sbjct: 796 VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAI 835
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 57/121 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ P+ ++N L+ YC ++ A I + M + PD +Y +++ G
Sbjct: 1030 MLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARN 1089
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + +EMK G + Y+ I+ + K+ +A + D+M +GL+ + ++
Sbjct: 1090 MKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDF 1149
Query: 121 F 121
F
Sbjct: 1150 F 1150
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 58/119 (48%), Gaps = 1/119 (0%)
Query: 109 KGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSC-MFLVKLCKRQEKVE 167
K + +++FF+V LR + ++ +M+ G + + SC ++L +L K K
Sbjct: 612 KDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTA 671
Query: 168 IALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
A+ ++ + E G + +++ +C +G++ EA L M KG+ P +S+ +
Sbjct: 672 TAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTV 730
>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 124/252 (49%), Gaps = 12/252 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E + PD+V+YN LI+ + K+ + +A ++ ++M I P+ I+Y+S+I G +
Sbjct: 316 MLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNR 375
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A + M GC P+ +N I YC AKR+ D L+ EM E GL + TTYN
Sbjct: 376 LDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE-- 178
FY DL ++ +L M+ +G P+ +C L+ K++ AL+++ M +
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSK 495
Query: 179 ---------KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKA 228
G + ++L L + GK +EAE+ + EM +G P +++ I
Sbjct: 496 KDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 555
Query: 229 LMELANKQEALQ 240
L + + EA Q
Sbjct: 556 LCKQSRLDEATQ 567
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 117/247 (47%), Gaps = 1/247 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRD-EDISPDVISYTSIIGGLGLVG 59
M E G++P ++Y ++D CK A ++ KM + I P+V+ Y++II L G
Sbjct: 210 MMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDG 269
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ A+++ EM+E G +PD YN+ I +C + R DA L+ EM+E+ +SP+ TYN
Sbjct: 270 RHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYN 329
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
F + LY M+ G +PNT + ++ +Q +++ A ++ M K
Sbjct: 330 ALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATK 389
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
G ++ + L D C ++ + + EM E G ++ + L A
Sbjct: 390 GCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAA 449
Query: 240 QNLSNKM 246
+L +M
Sbjct: 450 LDLLQEM 456
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 105/217 (48%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ P++V Y+ +ID CKD + A + +M+++ I PD+ +Y S+I G G+ A
Sbjct: 251 IIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAE 310
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+L+EM E PD YNA I + + +A L DEM+ +G+ PN TY+ F
Sbjct: 311 QLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGF 370
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
N L ++ +++ M GC PN + L+ ++++ ++L ++M E G +
Sbjct: 371 CKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADT 430
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
+ L +G L A EMI G P V+
Sbjct: 431 TTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVT 467
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 111/227 (48%), Gaps = 1/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E +P++V++ L++ C++ ++ +A ++++M ++ + P I+Y +I+ G+ G
Sbjct: 175 MFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGD 234
Query: 61 PDKARDVLKEMKEYG-CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
A ++L++M+E P+ Y+A I + C R DA L EM EKG+ P+ TYN
Sbjct: 235 TVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYN 294
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
F S + L M+ P+ + L+ ++ K A +L+++M+ +
Sbjct: 295 SMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPR 354
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G + + D C +L AE F M KG P+ ++F +
Sbjct: 355 GIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTL 401
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 103/228 (45%), Gaps = 3/228 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++ DI S+ LI +C ++ A K+ + PDV+++ +++ GL + +
Sbjct: 105 MERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDR 164
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++ +M E C P+ + + C R+ +A L+D M+E GL P TY
Sbjct: 165 VSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGT 224
Query: 121 FFRVFYWSNDLRSSWNLYCRMMG-TGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVE 178
D S+ NL +M + +PN ++ LCK + A L+ +M E
Sbjct: 225 IVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSD-AQNLFTEMQE 283
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
KG + + + C G+ +AE+ EM+E+ P V++ +
Sbjct: 284 KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNAL 331
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 92/191 (48%), Gaps = 11/191 (5%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKA---YKIVEKMRDE--------DISPDVISYT 49
M G+ PDIV+ + L+D C + +++ A +K+++K + + + PDV +Y
Sbjct: 456 MISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYN 515
Query: 50 SIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEK 109
+I GL G+ +A ++ +EM G PD Y++ I C RL +A+ + D M K
Sbjct: 516 ILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSK 575
Query: 110 GLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIA 169
SPN T+ + + + L+C M G + N + + L+ ++ + A
Sbjct: 576 SFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGA 635
Query: 170 LQLWNDMVEKG 180
L ++ +M+ G
Sbjct: 636 LDIFQEMISSG 646
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 72/146 (49%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV+PD+ +YN LI + + +A ++ E+M I PD I+Y+S+I GL + D+A
Sbjct: 506 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ M P+ + I YC A R+ D L EM +G+ NA TY
Sbjct: 566 TQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICG 625
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNT 150
F ++ + +++ M+ +G P+T
Sbjct: 626 FRKVGNINGALDIFQEMISSGVYPDT 651
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 115/283 (40%), Gaps = 48/283 (16%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P+++++N LID YC ++++ +++ +M + + D +Y ++I G LVG
Sbjct: 386 MATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGD 445
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDA--------------------- 99
+ A D+L+EM G PD + + C +L+DA
Sbjct: 446 LNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFN 505
Query: 100 -------------SGLMDE------------MVEKGLSPNATTYNLFFRVFYWSNDLRSS 134
SGL++E M +G+ P+ TY+ + L +
Sbjct: 506 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565
Query: 135 WNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDL 194
++ M PN + L+ + +V+ L+L+ +M +G + + L
Sbjct: 566 TQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICG 625
Query: 195 LCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQE 237
+G + A F EMI G P ++ R + L L +K+E
Sbjct: 626 FRKVGNINGALDIFQEMISSGVYPDTITIRNM--LTGLWSKEE 666
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 96/221 (43%), Gaps = 9/221 (4%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P +V + L+ V + + + + +KM + I D+ S+T +I + A
Sbjct: 77 PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALST 136
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
++ + G +PD +N + C+ R+ +A L +M E PN T+
Sbjct: 137 FGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCR 196
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+ + L RMM G P + +V +CK+ + V AL L M E S+I+
Sbjct: 197 EGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVS-ALNLLRKMEEV---SHII 252
Query: 187 VSDVLF----DLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ V++ D LC G+ +A+ F EM EKG P ++
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTY 293
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 94/224 (41%), Gaps = 1/224 (0%)
Query: 24 RQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAY 83
+ +E A + M P V+ + ++G + + +PD + ++M+ D ++
Sbjct: 58 KGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSF 117
Query: 84 NAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMG 143
I+ +C +L A ++ + GL P+ T+N + + + NL+ +M
Sbjct: 118 TILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFE 177
Query: 144 TGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVE 203
T C PN + L+ R+ ++ A+ L + M+E G + + D +C G V
Sbjct: 178 TTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVS 237
Query: 204 AEKSFLEMIEKGH-KPSQVSFRRIKALMELANKQEALQNLSNKM 246
A +M E H P+ V + I + + QNL +M
Sbjct: 238 ALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEM 281
>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 124/252 (49%), Gaps = 12/252 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E + PD+V+YN LI+ + K+ + +A ++ ++M I P+ I+Y+S+I G +
Sbjct: 316 MLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNR 375
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A + M GC P+ +N I YC AKR+ D L+ EM E GL + TTYN
Sbjct: 376 LDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE-- 178
FY DL ++ +L M+ +G P+ +C L+ K++ AL+++ M +
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSK 495
Query: 179 ---------KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKA 228
G + ++L L + GK +EAE+ + EM +G P +++ I
Sbjct: 496 KDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 555
Query: 229 LMELANKQEALQ 240
L + + EA Q
Sbjct: 556 LCKQSRLDEATQ 567
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 117/247 (47%), Gaps = 1/247 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRD-EDISPDVISYTSIIGGLGLVG 59
M E G++P ++Y ++D CK A ++ KM + I P+V+ Y++II L G
Sbjct: 210 MMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDG 269
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ A+++ EM+E G +PD YN+ I +C + R DA L+ EM+E+ +SP+ TYN
Sbjct: 270 RHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYN 329
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
F + LY M+ G +PNT + ++ +Q +++ A ++ M K
Sbjct: 330 ALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATK 389
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
G ++ + L D C ++ + + EM E G ++ + L A
Sbjct: 390 GCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAA 449
Query: 240 QNLSNKM 246
+L +M
Sbjct: 450 LDLLQEM 456
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 105/217 (48%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ P++V Y+ +ID CKD + A + +M+++ I PD+ +Y S+I G G+ A
Sbjct: 251 IIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAE 310
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+L+EM E PD YNA I + + +A L DEM+ +G+ PN TY+ F
Sbjct: 311 QLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGF 370
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
N L ++ +++ M GC PN + L+ ++++ ++L ++M E G +
Sbjct: 371 CKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADT 430
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
+ L +G L A EMI G P V+
Sbjct: 431 TTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVT 467
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 111/227 (48%), Gaps = 1/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E +P++V++ L++ C++ ++ +A ++++M ++ + P I+Y +I+ G+ G
Sbjct: 175 MFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGD 234
Query: 61 PDKARDVLKEMKEYG-CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
A ++L++M+E P+ Y+A I + C R DA L EM EKG+ P+ TYN
Sbjct: 235 TVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYN 294
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
F S + L M+ P+ + L+ ++ K A +L+++M+ +
Sbjct: 295 SMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPR 354
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G + + D C +L AE F M KG P+ ++F +
Sbjct: 355 GIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTL 401
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 105/228 (46%), Gaps = 3/228 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++ DI S+N LI +C ++ A K+ + PDV+++T+++ GL + +
Sbjct: 105 MERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDR 164
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++ +M E C P+ + + C R+ +A L+D M+E GL P TY
Sbjct: 165 VSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGT 224
Query: 121 FFRVFYWSNDLRSSWNLYCRMMG-TGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVE 178
D S+ NL +M + +PN ++ LCK + A L+ +M E
Sbjct: 225 IVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSD-AQNLFTEMQE 283
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
KG + + + C G+ +AE+ EM+E+ P V++ +
Sbjct: 284 KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNAL 331
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 92/191 (48%), Gaps = 11/191 (5%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKA---YKIVEKMRDE--------DISPDVISYT 49
M G+ PDIV+ + L+D C + +++ A +K+++K + + + PDV +Y
Sbjct: 456 MISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYN 515
Query: 50 SIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEK 109
+I GL G+ +A ++ +EM G PD Y++ I C RL +A+ + D M K
Sbjct: 516 ILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSK 575
Query: 110 GLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIA 169
SPN T+ + + + L+C M G + N + + L+ ++ + A
Sbjct: 576 SFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGA 635
Query: 170 LQLWNDMVEKG 180
L ++ +M+ G
Sbjct: 636 LDIFQEMISSG 646
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 72/146 (49%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV+PD+ +YN LI + + +A ++ E+M I PD I+Y+S+I GL + D+A
Sbjct: 506 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ M P+ + I YC A R+ D L EM +G+ NA TY
Sbjct: 566 TQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICG 625
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNT 150
F ++ + +++ M+ +G P+T
Sbjct: 626 FRKVGNINGALDIFQEMISSGVYPDT 651
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 115/283 (40%), Gaps = 48/283 (16%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P+++++N LID YC ++++ +++ +M + + D +Y ++I G LVG
Sbjct: 386 MATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGD 445
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDA--------------------- 99
+ A D+L+EM G PD + + C +L+DA
Sbjct: 446 LNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFN 505
Query: 100 -------------SGLMDE------------MVEKGLSPNATTYNLFFRVFYWSNDLRSS 134
SGL++E M +G+ P+ TY+ + L +
Sbjct: 506 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565
Query: 135 WNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDL 194
++ M PN + L+ + +V+ L+L+ +M +G + + L
Sbjct: 566 TQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICG 625
Query: 195 LCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQE 237
+G + A F EMI G P ++ R + L L +K+E
Sbjct: 626 FRKVGNINGALDIFQEMISSGVYPDTITIRNM--LTGLWSKEE 666
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 94/224 (41%), Gaps = 1/224 (0%)
Query: 24 RQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAY 83
+ +E A + M P V+ + ++G + + +PD + ++M+ D ++
Sbjct: 58 KGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSF 117
Query: 84 NAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMG 143
N I+ +C +L A ++ + GL P+ T+ + + + NL+ +M
Sbjct: 118 NILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFE 177
Query: 144 TGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVE 203
T C PN + L+ R+ ++ A+ L + M+E G + + D +C G V
Sbjct: 178 TTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVS 237
Query: 204 AEKSFLEMIEKGH-KPSQVSFRRIKALMELANKQEALQNLSNKM 246
A +M E H P+ V + I + + QNL +M
Sbjct: 238 ALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEM 281
>gi|11079489|gb|AAG29201.1|AC078898_11 hypothetical protein [Arabidopsis thaliana]
Length = 481
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 132/249 (53%), Gaps = 1/249 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G PDIV+Y+ ++D+ CK +V++A IV M P Y+ ++ G +
Sbjct: 227 MIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENR 286
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A D EM+ G D A +N+ I +C A R+++ ++ EM KG++PN+ + N+
Sbjct: 287 LEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNI 346
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
R + +++++ +M+ C P+ + ++K+ ++++E A ++W M +KG
Sbjct: 347 ILRHLIERGEKDEAFDVFRKMIKV-CEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKG 405
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ VL + LC+ +A EMIE G +PS V+F R++ L+ +++ L+
Sbjct: 406 VFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEEREDVLK 465
Query: 241 NLSNKMALF 249
L+ KM +
Sbjct: 466 FLNEKMNVL 474
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/237 (20%), Positives = 105/237 (44%), Gaps = 2/237 (0%)
Query: 10 IVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLK 69
+ +Y+ +I+ K RQ + + ++ MR + + +V ++ ++ + D+A
Sbjct: 98 VRAYHMMIESTAKIRQYKLMWDLINAMRKKKML-NVETFCIVMRKYARAQKVDEAIYAFN 156
Query: 70 EMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSN 129
M++Y P+ A+N + C +K +R A + + M ++ +P++ TY++ +
Sbjct: 157 VMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDR-FTPDSKTYSILLEGWGKEP 215
Query: 130 DLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSD 189
+L + ++ M+ GC P+ + +V + + +V+ AL + M +
Sbjct: 216 NLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYS 275
Query: 190 VLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKM 246
VL +L EA +FLEM G K F + AN+ + + + +M
Sbjct: 276 VLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEM 332
>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 117/224 (52%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G PD ++ LID CK+ +V +A +I+E M + PD+++Y +++ GL LVGQ
Sbjct: 242 MVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQ 301
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A + + + + G + +YN I YC +++ +A L +EM KGL P+ TYN
Sbjct: 302 LEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNT 361
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTG-CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
S +R++ L+ M G L + C+ L LCK +E A+ L+ + +
Sbjct: 362 LIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGH-LEEAIDLFQSIKKT 420
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I V +L D +C GKL EA K F E+ + G +P +++
Sbjct: 421 EHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAY 464
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 116/243 (47%), Gaps = 1/243 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G +PDI++YN L++ C Q+E A K+ E + D I +V SY +I G +
Sbjct: 277 MHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQK 336
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + +EM+ G P YN I C + R+R A L EM G +TY +
Sbjct: 337 IDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCV 396
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L + +L+ + T PN + L+ R K+E A + ++++ + G
Sbjct: 397 LLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNG 456
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
+ ++L + LC+ G L EA K +M EKG P ++F I+ L++ EA+
Sbjct: 457 LEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAI 516
Query: 240 QNL 242
Q L
Sbjct: 517 QLL 519
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 98/207 (47%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ PD+V Y+ L+D C+ ++++A + ++M IS DV +Y S+I GL G +
Sbjct: 176 GILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEV 235
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
L M + G PDA + I C ++ +A +++ M KG P+ TYN
Sbjct: 236 TWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNG 295
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
L + L+ + G N S L+ + +K++ A +L+ +M KG
Sbjct: 296 LCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPS 355
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEM 211
+ + L LC G++ A+K F+EM
Sbjct: 356 TVTYNTLIGALCQSGRVRTAQKLFVEM 382
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 113/244 (46%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
K D+ +Y +ID CKD +A + +M I PDV+ Y+S++ GL G+ +A +
Sbjct: 143 KGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALE 202
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
KEM+ G D YN+ I A ++ + ++ MV++G SP+A T+ +
Sbjct: 203 FFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLC 262
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+ + + M G P+ + L+ ++E A +L+ + ++G +
Sbjct: 263 KEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVF 322
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKM 246
++L + C K+ EA + F EM KG KPS V++ + + + + Q L +M
Sbjct: 323 SYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEM 382
Query: 247 ALFG 250
G
Sbjct: 383 QTCG 386
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 104/227 (45%), Gaps = 35/227 (15%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+ + G+K ++ SYN LI+ YCKD+++++A+++ E+MR + + P ++Y ++IG L G+
Sbjct: 312 LADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGR 371
Query: 61 PDKARDVLKEMKEYGCY-----------------------------------PDAAAYNA 85
A+ + EM+ G + P+ ++
Sbjct: 372 VRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSI 431
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
+ C A +L +A DE+ + GL P+ YN+ L + L +M G
Sbjct: 432 LLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKG 491
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLF 192
CLP++ + +++ ++ ++ A+QL +M + F V+ +L
Sbjct: 492 CLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 538
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 105/227 (46%), Gaps = 9/227 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+ D +Y LI+ CK R+ A K+ EKM+ + DV +Y II L G
Sbjct: 103 MTEKGLFGDAKTYGILINGLCKARKTGLAIKLHEKMKG-NCKGDVFTYGMIIDSLCKDGM 161
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A D+ EM G PD Y++ + C RL++A EM +G+S + TYN
Sbjct: 162 TTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNS 221
Query: 121 FF----RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDM 176
R W +W L M+ G P+ + L+ ++ KV A Q+ M
Sbjct: 222 LIHGLSRAGLWK---EVTWFLNL-MVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELM 277
Query: 177 VEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
KG IL + L + LC +G+L +A K F + ++G K + S+
Sbjct: 278 HHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSY 324
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 85/183 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G + +Y L+D CK+ +E+A + + ++ + P++ ++ ++ G+ G+
Sbjct: 382 MQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGK 441
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A E+ + G PD AYN I C L +A L+ +M EKG P++ T+N+
Sbjct: 442 LEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNV 501
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ N++ + L M P+ L+ L + AL + ++KG
Sbjct: 502 IIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLLCLASFDPQWHAALVSLPNALQKG 561
Query: 181 FGS 183
GS
Sbjct: 562 VGS 564
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 63/141 (44%), Gaps = 1/141 (0%)
Query: 75 GCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSS 134
G PDA ++ + + DA L DEM EKGL +A TY + + +
Sbjct: 72 GFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLA 131
Query: 135 WNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDL 194
L+ +M G M + LCK E AL ++++M+ G ++V L D
Sbjct: 132 IKLHEKMKGNCKGDVFTYGMIIDSLCKDGMTTE-ALDMFSEMIGAGILPDVVVYSSLMDG 190
Query: 195 LCDMGKLVEAEKSFLEMIEKG 215
LC G+L EA + F EM +G
Sbjct: 191 LCRFGRLKEALEFFKEMEGRG 211
>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
Length = 1320
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 116/224 (51%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ GV PD V Y +I +CK V A K+ ++MR + I PD+++YTS+I G+ G+
Sbjct: 338 MRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGK 397
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR++ EM G PD Y A I YC A +++A + ++MV+KGL+PN TY
Sbjct: 398 MVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTA 457
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+ ++ + L M G PN + +V LCK +E ++L +M
Sbjct: 458 LADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIG-NIEQTVKLMEEMDLA 516
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
GF + L D C MG++ +A + M+ K +P+ V+F
Sbjct: 517 GFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTF 560
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 113/215 (52%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G++P++ +YN +++ CK +E+ K++E+M PD I+YT+++ +G+
Sbjct: 478 MSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGE 537
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA ++L+ M P +N + +C++ L D L++ M+EKG+ PNATT+N
Sbjct: 538 MAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNS 597
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + N++R++ +Y M G +P++ + L+K + ++ A L +MVEKG
Sbjct: 598 LMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKG 657
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
+ D L K VEA K F EM + G
Sbjct: 658 YSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHG 692
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 124/246 (50%), Gaps = 6/246 (2%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+KPD YN +I + CK+ +V +A +++ MR + PD + YT++I G +G A
Sbjct: 307 GLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAA 366
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ EM+ PD Y + I C + ++ +A + +EM+ KGL P+ TY
Sbjct: 367 CKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDG 426
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGS 183
+ + +++ +++++ +M+ G PN + L LCK E +++A +L ++M KG
Sbjct: 427 YCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGE-IDVANELLHEMSRKGLQP 485
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIK----ALMELANKQEAL 239
+ + + + LC +G + + K EM G P +++ + + E+A E L
Sbjct: 486 NVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELL 545
Query: 240 QNLSNK 245
+ + NK
Sbjct: 546 RIMLNK 551
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 105/197 (53%), Gaps = 3/197 (1%)
Query: 1 MREM---GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGL 57
M EM G PD ++Y L+D YCK ++ KA++++ M ++ + P ++++ ++ G +
Sbjct: 510 MEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCM 569
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
G + +++ M E G P+A +N+ ++ YCI +R + + M ++G+ P++ T
Sbjct: 570 SGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNT 629
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
YN+ + + +++ +W L+ M+ G + L++ +++K A +L+ +M
Sbjct: 630 YNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMR 689
Query: 178 EKGFGSYILVSDVLFDL 194
+ G + + D+ D+
Sbjct: 690 KHGLVAEKDIYDIFVDV 706
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 124/252 (49%), Gaps = 4/252 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G PD+VSY ++ YC+ +++K K+V++++ + + PD Y +II L G+
Sbjct: 268 MTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGE 327
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A +L+ M+++G +PD Y I +C + A L DEM K + P+ TY
Sbjct: 328 VVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTS 387
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
S + + ++ M+ G P+ + L+ CK E E A + N MV+K
Sbjct: 388 VIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKE-AFSVHNQMVQK 446
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI-KALMELANKQEA 238
G ++ L D LC G++ A + EM KG +P+ ++ I L ++ N ++
Sbjct: 447 GLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQT 506
Query: 239 LQNLSNKMALFG 250
++ L +M L G
Sbjct: 507 VK-LMEEMDLAG 517
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 90/187 (48%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
++P +V++N L++ +C +E +++E M ++ I P+ ++ S++ +
Sbjct: 553 LQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATT 612
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
++ K M + G PD+ YN I+ +C A+ +++A L EMVEKG S A TY+ R F
Sbjct: 613 EIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGF 672
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
Y + L+ M G + V + + EI L+L ++ + + G+
Sbjct: 673 YKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVDVNYEEGNWEITLELCDEFMTELSGTIF 732
Query: 186 LVSDVLF 192
+V F
Sbjct: 733 VVYICFF 739
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 95/204 (46%), Gaps = 2/204 (0%)
Query: 21 CKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDA 80
C ++ A K+ E+ + + + +S ++ L +G+ +A ++L +M + G +PD
Sbjct: 218 CNFEGIKIAVKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDV 277
Query: 81 AAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCR 140
+Y + YC L L+DE+ KGL P+ YN + + ++ + L
Sbjct: 278 VSYGVVVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRG 337
Query: 141 MMGTGCLP-NTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMG 199
M G P N + CK V A +L+++M K I+ + +C G
Sbjct: 338 MRKWGVFPDNVVYTTVISGFCKLG-NVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSG 396
Query: 200 KLVEAEKSFLEMIEKGHKPSQVSF 223
K+VEA + F EM+ KG +P +V++
Sbjct: 397 KMVEAREMFNEMLVKGLEPDEVTY 420
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 73/165 (44%), Gaps = 1/165 (0%)
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAI-RNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
+A+ + ++ YG + N + R C + ++ A + +E E G+ N + N+
Sbjct: 189 EAQKLFHKLLRYGVVVSVDSCNLFLSRLSCNFEGIKIAVKVFEEFPELGVCWNTVSCNIV 248
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
+R + NL +M G P+ S +V R +++ L+L +++ KG
Sbjct: 249 LHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKGKGL 308
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + + LLC G++VEAE+ M + G P V + +
Sbjct: 309 KPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTV 353
>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 504
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 127/249 (51%), Gaps = 11/249 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M EMG +P++V YN +ID CK +QV+ A ++ +M + I PD ++Y S+I GL G+
Sbjct: 177 MVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGR 236
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A ++ M + YPD +NA I R+ +A L +EM+ + L P+ TY+L
Sbjct: 237 WDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSL 296
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L + ++ M+ GC P+ + L+ + +KVE ++L+ +M ++G
Sbjct: 297 LIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRG 356
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI-----------KAL 229
+ VL C GKL AE+ F M+ G P+ +++ + KAL
Sbjct: 357 VVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKAL 416
Query: 230 MELANKQEA 238
+ LA+ Q++
Sbjct: 417 VILADMQKS 425
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 107/222 (48%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G++PD V+YN LI C + + A ++V M +I PDV ++ ++I G+ +A
Sbjct: 216 GIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEA 275
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++ +EM PD Y+ I C+ RL +A + MV KG P+ TY++
Sbjct: 276 EELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILING 335
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ S + L+C M G + NT + L++ R K+ +A +++ MV G
Sbjct: 336 YCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPN 395
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
I+ +VL LCD GK+ +A +M + G V++ I
Sbjct: 396 IITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNII 437
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 104/223 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ +G+ ++ + N L++ +C+ Q+ A + KM PD++++ S++ G +
Sbjct: 107 MQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDR 166
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A + M E G P+ YN I C +K++ +A L++ M G+ P+A TYN
Sbjct: 167 IYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNS 226
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
S + + M P+ + L+ C ++ ++ A +L+ +M+ +
Sbjct: 227 LISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRS 286
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I+ +L LC +L EAE+ F M+ KG P V++
Sbjct: 287 LDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTY 329
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 80/158 (50%), Gaps = 2/158 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD+V+Y+ LI+ YCK ++VE K+ +M + + ++YT +I G G+
Sbjct: 317 MVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGK 376
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A ++ K M G P+ YN + C ++ A ++ +M + G+ + TYN+
Sbjct: 377 LNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNI 436
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPN--TQSCMFL 156
R + ++ +W+LYC + G P+ T + M L
Sbjct: 437 IIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMML 474
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 73/149 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV + V+Y LI YC+ ++ A +I + M + P++I+Y ++ GL G+
Sbjct: 352 MSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGK 411
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA +L +M++ G D YN IR C A + DA L + KGL+P+ TY
Sbjct: 412 IEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTA 471
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPN 149
Y + L+ +M G LPN
Sbjct: 472 MMLGLYKKGLRGEADALFRKMKEDGILPN 500
Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 33/181 (18%), Positives = 76/181 (41%)
Query: 43 PDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGL 102
P + ++ ++ + + + D + ++M+ G + N + +C +L A
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 103 MDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKR 162
+ +M++ G P+ T+ F + + + ++ RM+ G PN ++ +
Sbjct: 139 LGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCK 198
Query: 163 QEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
++V+ AL L N M G + + L LC+ G+ +A + M ++ P +
Sbjct: 199 SKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFT 258
Query: 223 F 223
F
Sbjct: 259 F 259
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 70/165 (42%)
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
D + D+ M + P A ++ + K+ L ++M G+ N T N+
Sbjct: 63 DDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNIL 122
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
F + L + + +MM G P+ + L+ R +++ AL +++ MVE G+
Sbjct: 123 LNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGY 182
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+++ + + D LC ++ A M G +P V++ +
Sbjct: 183 EPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSL 227
Score = 37.0 bits (84), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 42/93 (45%)
Query: 131 LRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDV 190
L S +L+ M+ LP+ L+ + +K ++ + LW M G + ++
Sbjct: 62 LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121
Query: 191 LFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
L + C +L A +M++ GH+P V+F
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTF 154
>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 788
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 121/223 (54%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G++PD+++YN LID YCK + V++A + +++ ++++ P + SY S+I GL G+
Sbjct: 326 MVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGR 385
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ +L EM PD YN I C R+ +A G++ M++KG+ PN TYN
Sbjct: 386 ISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNA 445
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ N++ + +++ RM+ +G P+ + L+ + E V+ A+ L+ +M K
Sbjct: 446 MMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKN 505
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I + L D LC++G++ ++ EM + G P +++
Sbjct: 506 LIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITY 548
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 118/251 (47%), Gaps = 3/251 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GVKP+IV+YN ++D YC V A I +M + PD+++Y +I G
Sbjct: 431 MMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEM 490
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + KEM+ PD A+YN+ I C R+ L+DEM + G SP+ TYN+
Sbjct: 491 VDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNI 550
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEK 179
F + + +L+ R + G P+ + +V LCK EK+++A ++
Sbjct: 551 LLDAFCKTQPFDKAISLF-RQIVEGIWPDFYTNHAIVDNLCK-GEKLKMAEDALKHLLMH 608
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
G + +L + LC G EA +M + P ++F I ++ N+ +
Sbjct: 609 GCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKA 668
Query: 240 QNLSNKMALFG 250
+ L +M G
Sbjct: 669 EKLREEMIARG 679
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 120/248 (48%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E G+ D V+YN LID C + ++ +++ KM E++ PD ++ +I L G+
Sbjct: 223 ERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRIL 282
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
+A+ VL M + G PD YNA + YC + + +A L + MV++GL P+ YN+
Sbjct: 283 EAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLI 342
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
+ + + + L+ + +P S L+ ++ +L ++M
Sbjct: 343 DGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQP 402
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNL 242
++ ++L D LC G+++EA + M++KG KP+ V++ + L N +++
Sbjct: 403 PDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDI 462
Query: 243 SNKMALFG 250
N+M G
Sbjct: 463 FNRMVKSG 470
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 112/240 (46%), Gaps = 1/240 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + V+P++V Y+ LID CKD V A + ++ + I D ++Y S+I G VG+
Sbjct: 186 MEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGR 245
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ +L +M PD +N I C R+ +A G++ M ++G P+ TYN
Sbjct: 246 WQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNA 305
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ + L+ RM+ G P+ + L+ + + V+ A+ L+ ++ K
Sbjct: 306 LMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKN 365
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEAL 239
I + L D LC+ G++ +K EM P V++ I AL + EAL
Sbjct: 366 LVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEAL 425
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 103/218 (47%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
D +Y LI+ K+ Q++ A ++++M + P+++ Y+++I GL G A +
Sbjct: 159 DQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLC 218
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
++ E G DA YN+ I C R ++ + L+ +MV + + P+ T+N+
Sbjct: 219 SQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKE 278
Query: 129 NDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVS 188
+ + + M G P+ + L++ +E V A +L+N MV++G +L
Sbjct: 279 GRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNY 338
Query: 189 DVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+VL D C + EA F E+ K P+ S+ +
Sbjct: 339 NVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSL 376
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/195 (18%), Positives = 78/195 (40%)
Query: 21 CKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDA 80
C+ R V+ A +M P + ++G + +G A + +++ G P
Sbjct: 31 CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90
Query: 81 AAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCR 140
A + I Y A L+ +++ G PN T+N F + + + +
Sbjct: 91 ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150
Query: 141 MMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGK 200
++ G L + + L+ + +++ AL L +M + +++ L D LC G
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGF 210
Query: 201 LVEAEKSFLEMIEKG 215
+ +A ++ E+G
Sbjct: 211 VSDALGLCSQIGERG 225
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/216 (18%), Positives = 84/216 (38%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P ++ L+ + A + +++ + ISP + ++T +I A +
Sbjct: 53 PPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSL 112
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L + + G P+ +N I +CI + A ++ +G + TY
Sbjct: 113 LATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSK 172
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ ++++ +L M + PN L+ + V AL L + + E+G +
Sbjct: 173 NGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVT 232
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ L D C +G+ E + +M+ + P +F
Sbjct: 233 YNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTF 268
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 56/122 (45%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ PD + + ++D CK +++ A ++ + SP+V +YT +I L G +A
Sbjct: 574 GIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEA 633
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+L +M++ PDA + I A L +EM+ +GL + N V
Sbjct: 634 MLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGLVNIEKSLNQSHNV 693
Query: 125 FY 126
F+
Sbjct: 694 FF 695
>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
gi|224030695|gb|ACN34423.1| unknown [Zea mays]
gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
Length = 756
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 106/222 (47%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G +PD V+YN + C++ V A K+++ M E PDV +Y ++I L G+ D+A
Sbjct: 295 GFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEA 354
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ ++ +M + GC PD +N I C RL +A L E+ KGLSP+ T+N+
Sbjct: 355 KGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINA 414
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
D L+ M +GC P+ + L+ K+ AL L +M G
Sbjct: 415 LCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRS 474
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + + D LC ++ EAE+ F +M G S V+F +
Sbjct: 475 TVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTL 516
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 115/259 (44%), Gaps = 37/259 (14%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G++PD+V+ N LI C+ QV A ++E+M ++PD ++T+++ G G
Sbjct: 186 MTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGS 245
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASG------------------- 101
+ A V +M E GC P N I YC R+ DA G
Sbjct: 246 IEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNT 305
Query: 102 ----------------LMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
+MD M+++G P+ TYN + +L + + +M+ G
Sbjct: 306 FVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRG 365
Query: 146 CLPNTQSC-MFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEA 204
CLP+T + +V LC Q ++E AL L ++ KG + ++L + LC +G
Sbjct: 366 CLPDTTTFNTLIVALCS-QNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLG 424
Query: 205 EKSFLEMIEKGHKPSQVSF 223
+ F EM G P +V++
Sbjct: 425 IRLFEEMKSSGCAPDEVTY 443
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 105/225 (46%), Gaps = 1/225 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G V+YN +ID CK ++E+A ++ ++M IS +++ ++I GL +
Sbjct: 466 MESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKR 525
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A +++++M + G P YN+ + +YC L+ A+ +++ M G + TY
Sbjct: 526 IDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGT 585
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + L M G P ++ +++ R+ + AL L+ +M E G
Sbjct: 586 LINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVG 645
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFL-EMIEKGHKPSQVSFR 224
L ++F LC G ++ FL EM+ KG P SFR
Sbjct: 646 EPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFR 690
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 107/225 (47%), Gaps = 2/225 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G PD V+YN LID C ++ A ++++M ++Y +II L +
Sbjct: 431 MKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMR 490
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A +V +M +G A +N I C AKR+ DA+ L+++MV++GL P+ TYN
Sbjct: 491 IEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNS 550
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+ DL+ + ++ M G + + L+ LCK + ++AL+L M K
Sbjct: 551 ILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCK-AGRTQVALKLLRGMRIK 609
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
G + + L L +A F EM E G P ++++
Sbjct: 610 GIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYK 654
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 109/237 (45%), Gaps = 3/237 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ PD+ ++N LI+ CK ++ E+M+ +PD ++Y +I L +G+ A
Sbjct: 400 GLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNA 459
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
D+LKEM+ GC YN I C R+ +A + D+M G+S +A T+N
Sbjct: 460 LDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDG 519
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLP-NTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
+ + + L +M+ G P N L CK Q ++ A + M GF
Sbjct: 520 LCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCK-QGDLKKAADILETMTANGFEI 578
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
++ L + LC G+ A K M KG +P+ ++ I++L N ++AL
Sbjct: 579 DVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDAL 635
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 80/159 (50%), Gaps = 1/159 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G++P ++YN ++ YCK ++KA I+E M DV++Y ++I GL G+
Sbjct: 536 MVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGR 595
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +L+ M+ G P AYN I++ LRDA L EM E G P+A TY +
Sbjct: 596 TQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKI 655
Query: 121 FFR-VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK 158
FR + ++ +++ M+ G +P S L +
Sbjct: 656 VFRGLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAE 694
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 102/247 (41%), Gaps = 1/247 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVE-KMRDEDISPDVISYTSIIGGLGLVG 59
MR G + ++ Y + R+ + A +V ++ + D Y ++ L
Sbjct: 115 MRREGHEAGAGVVRSFVESYARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGS 174
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ V EM + G PD N I+ C A ++R A +++EM ++P+ TT+
Sbjct: 175 RMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFT 234
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ F + ++ + +MM TGC P + L+ + +VE AL +
Sbjct: 235 TLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIAD 294
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
GF + + LC G + A K M+++GH P ++ + + + +
Sbjct: 295 GFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEA 354
Query: 240 QNLSNKM 246
+ + N+M
Sbjct: 355 KGIVNQM 361
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 86/221 (38%), Gaps = 36/221 (16%)
Query: 39 EDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKE------------------------- 73
ED +P Y II LG G D +++EM+
Sbjct: 83 EDFAPSRAVYEEIIQKLGTAGAFDLMEGLVREMRREGHEAGAGVVRSFVESYARLRRFDD 142
Query: 74 -----------YGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
+G D A YN + R++ + +EM ++G+ P+ T N
Sbjct: 143 AVDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLI 202
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
+ ++ +R++ + M P+ + L++ + +E AL++ M+E G
Sbjct: 203 KALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCS 262
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ +VL + C MG++ +A + I G +P QV++
Sbjct: 263 PTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTY 303
>gi|224133408|ref|XP_002321560.1| predicted protein [Populus trichocarpa]
gi|222868556|gb|EEF05687.1| predicted protein [Populus trichocarpa]
Length = 491
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 120/241 (49%), Gaps = 7/241 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ P++ SYN ++ Y + Q+ +A+ +M+ D DVI+YT++I G G+ G+
Sbjct: 231 MVKRGLTPNLTSYNTMLKGYFRAGQINEAWDFFLEMKKRDCEIDVITYTTVIHGFGVAGE 290
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR V M + G P A YNA I+ C + +A + +EMV KG PN+ TYNL
Sbjct: 291 IKRARKVFDTMVKKGVLPSVATYNAFIQVLCKKDNVDNAIVIFEEMVVKGYVPNSITYNL 350
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE-- 178
R ++ + RM GC PN Q+ +++ + +++ AL L+ M
Sbjct: 351 VIRGLCHRGEMERAMEFMGRMKDDGCEPNVQTYNLVIRYFCDEGEIDKALDLFQKMTSGD 410
Query: 179 --KGFGSY-ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANK 235
+Y IL+S + D L+ A +EM+++G P + +F R+ + L
Sbjct: 411 CLPNLDTYNILISAMFVRKKSD--DLLVAGNLLIEMVDRGFVPRKFTFNRVLNGLLLTGN 468
Query: 236 Q 236
Q
Sbjct: 469 Q 469
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 123/234 (52%), Gaps = 2/234 (0%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
+ D VSYN +++ +C ++ KA +++++M ++P++ SY +++ G GQ ++A D
Sbjct: 202 RADCVSYNVMVNGWCLIKRTNKALEMLKEMVKRGLTPNLTSYNTMLKGYFRAGQINEAWD 261
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
EMK+ C D Y I + +A ++ A + D MV+KG+ P+ TYN F +V
Sbjct: 262 FFLEMKKRDCEIDVITYTTVIHGFGVAGEIKRARKVFDTMVKKGVLPSVATYNAFIQVLC 321
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYI 185
+++ ++ ++ M+ G +PN+ + +++ LC R E +E A++ M + G +
Sbjct: 322 KKDNVDNAIVIFEEMVVKGYVPNSITYNLVIRGLCHRGE-MERAMEFMGRMKDDGCEPNV 380
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
+++ CD G++ +A F +M P+ ++ + + M + K + L
Sbjct: 381 QTYNLVIRYFCDEGEIDKALDLFQKMTSGDCLPNLDTYNILISAMFVRKKSDDL 434
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 117/223 (52%), Gaps = 1/223 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G D+ S+N ++DV CK ++VE AY + + + + D +SY ++ G L+ +
Sbjct: 162 MHQFGCFQDLQSFNTILDVLCKSKRVEMAYNLFKVFKGK-FRADCVSYNVMVNGWCLIKR 220
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA ++LKEM + G P+ +YN ++ Y A ++ +A EM ++ + TY
Sbjct: 221 TNKALEMLKEMVKRGLTPNLTSYNTMLKGYFRAGQINEAWDFFLEMKKRDCEIDVITYTT 280
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + +++ + ++ M+ G LP+ + +++ +++ V+ A+ ++ +MV KG
Sbjct: 281 VIHGFGVAGEIKRARKVFDTMVKKGVLPSVATYNAFIQVLCKKDNVDNAIVIFEEMVVKG 340
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + +++ LC G++ A + M + G +P+ ++
Sbjct: 341 YVPNSITYNLVIRGLCHRGEMERAMEFMGRMKDDGCEPNVQTY 383
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 104/246 (42%), Gaps = 34/246 (13%)
Query: 12 SYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEM 71
SY+ ID+ + R +V +MR + P ++ I G+P +A V M
Sbjct: 103 SYDHAIDISARLRDSPSLRSLVYRMRSARLGPTPKTFAIIAERYASAGKPHRAVKVFLSM 162
Query: 72 KEYGCYPD----------------------------------AAAYNAAIRNYCIAKRLR 97
++GC+ D +YN + +C+ KR
Sbjct: 163 HQFGCFQDLQSFNTILDVLCKSKRVEMAYNLFKVFKGKFRADCVSYNVMVNGWCLIKRTN 222
Query: 98 DASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV 157
A ++ EMV++GL+PN T+YN + ++ + + +W+ + M C + + ++
Sbjct: 223 KALEMLKEMVKRGLTPNLTSYNTMLKGYFRAGQINEAWDFFLEMKKRDCEIDVITYTTVI 282
Query: 158 KLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHK 217
+++ A ++++ MV+KG + + +LC + A F EM+ KG+
Sbjct: 283 HGFGVAGEIKRARKVFDTMVKKGVLPSVATYNAFIQVLCKKDNVDNAIVIFEEMVVKGYV 342
Query: 218 PSQVSF 223
P+ +++
Sbjct: 343 PNSITY 348
>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
Length = 962
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 120/251 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G++P ++++N LI++ K +V +A I+ ++ D+SPDV +YTS+I G
Sbjct: 231 MLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRN 290
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A V M + GC P++ Y+ I C R+ +A +++EM+EKG+ P TY L
Sbjct: 291 LDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTL 350
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L RM GC PN Q+ L+ R K+E+A+ L++ M+++G
Sbjct: 351 PITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEG 410
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ + L + LC G+ A K F M G + ++ I + L E
Sbjct: 411 LVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAM 470
Query: 241 NLSNKMALFGP 251
L KM GP
Sbjct: 471 VLFEKMLKMGP 481
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 115/244 (47%), Gaps = 24/244 (9%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M EMG P++ SYN +I+ K+ + +A KI +KM ++ + P+VI+YT++I GL G+
Sbjct: 581 MEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGR 640
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A + +M++ C P+ Y++ I C + +A L+ EM KGL+P+ T+
Sbjct: 641 TQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTS 700
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQ-----EKV--------- 166
F + ++ L RM+ GC PN ++ L+K +++ EKV
Sbjct: 701 LIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYS 760
Query: 167 ----------EIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGH 216
EI L M E G + L LC G+ EAE+ +M E+G
Sbjct: 761 FSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGF 820
Query: 217 KPSQ 220
P +
Sbjct: 821 CPDR 824
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 109/223 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E G +PD +YN L+ + K ++E A ++M + ++P+ +SYT++I G G+
Sbjct: 511 MKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGK 570
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A +L+ M+E GC P+ +YNA I R +A + D+M E+GL PN TY
Sbjct: 571 VDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTT 630
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + ++ ++ M CLPN + L+ ++ K + A L +M KG
Sbjct: 631 LIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKG 690
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ L D +G++ A M++ G KP+ ++
Sbjct: 691 LAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTY 733
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 103/226 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +MG P +V+YN LI+ Y V A ++++ M++ PD +Y ++ G G+
Sbjct: 476 MLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGK 535
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A +EM E G P+ +Y I + ++ A L++ M E G +PN +YN
Sbjct: 536 LESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNA 595
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
N + + +M G LPN + L+ R + + A ++++DM ++
Sbjct: 596 VINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRK 655
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ L LC GK EAE EM KG P +V+F +
Sbjct: 656 CLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSL 701
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 108/221 (48%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ PD+ +Y LI +C++R ++ A+ + ++M E P+ ++Y+++I GL G+ D+A
Sbjct: 271 LSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEAL 330
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
D+L+EM E G P Y I C + +A L+ M ++G PN TY
Sbjct: 331 DMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGL 390
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
L + LY +M+ G +PNT + L+ + AL++++ M G +
Sbjct: 391 SRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANT 450
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + LC G + +A F +M++ G P+ V++ +
Sbjct: 451 QTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTL 491
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 102/226 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ P+ V+YN LI+ C + A KI M + +Y II GL L G
Sbjct: 406 MLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGD 465
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA + ++M + G P YN I Y + +A+ L+D M E G P+ TYN
Sbjct: 466 IEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNE 525
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F L S+ + M+ G PN S L+ + KV+IAL L M E G
Sbjct: 526 LVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMG 585
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + + + L + EAEK +M E+G P+ +++ +
Sbjct: 586 CNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTL 631
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 118/273 (43%), Gaps = 59/273 (21%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+ P++++Y LID C++ + + A+KI M P++ +Y+S+I GL G+
Sbjct: 616 MAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGK 675
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A +LKEM+ G PD + + I + + R+ A L+ MV+ G PN TY++
Sbjct: 676 ADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSV 735
Query: 121 FFR-------------------VFYWSN-----DLRSSWNLYCRMMGTGCLPNTQSCMFL 156
+ V+ +S + NL RM GC P + L
Sbjct: 736 LLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTL 795
Query: 157 VK-LCKRQE----------------------------------KVEIALQLWNDMVEKGF 181
V LC++ +V+ AL++++ + KGF
Sbjct: 796 VSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGF 855
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEK 214
++ + L LC G++ EA+ F M+EK
Sbjct: 856 QLHLSIYRALICALCKAGQVEEAQALFDNMLEK 888
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 117/257 (45%), Gaps = 4/257 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G +P++ +Y LI + ++E A + KM E + P+ ++Y ++I L + G+
Sbjct: 371 MKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGR 430
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A + M+ +G + YN I+ C+ + A L ++M++ G P TYN
Sbjct: 431 FSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNT 490
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ ++ L M GC P+ + LV + K+E A + +MVE G
Sbjct: 491 LINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECG 550
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLE-MIEKGHKPSQVSFRRIKALMELANKQEAL 239
+ L D GK V+ S LE M E G P+ S+ + + N+
Sbjct: 551 LNPNPVSYTTLIDGHSKDGK-VDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEA 609
Query: 240 QNLSNKMALFG--PSMI 254
+ + +KMA G P++I
Sbjct: 610 EKICDKMAEQGLLPNVI 626
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 96/213 (45%), Gaps = 5/213 (2%)
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
+ AR++ K+M G P +N I ++R+A ++ ++ + LSP+ TY
Sbjct: 222 EGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSL 281
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
+ +L ++ ++ RM+ GC PN+ + L+ + +V+ AL + +M+EKG
Sbjct: 282 ILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGI 341
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQN 241
+ + LC + EA + M ++G +P+ ++ + + + K E
Sbjct: 342 EPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIG 401
Query: 242 LSNKMALFGPSMIPKREEYLA---EMSASDSFS 271
L +KM G ++P Y A E+ FS
Sbjct: 402 LYHKMLKEG--LVPNTVTYNALINELCVGGRFS 432
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 95/226 (42%), Gaps = 26/226 (11%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGL----- 55
M G+ PD V++ LID + +++ A+ ++ +M D P+ +Y+ ++ GL
Sbjct: 686 MERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECL 745
Query: 56 -----------GLVGQPDKARDV--------LKEMKEYGCYPDAAAYNAAIRNYCIAKRL 96
+ +DV L M E GC P Y+ + C R
Sbjct: 746 LLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRF 805
Query: 97 RDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFL 156
+A L+ +M E+G P+ Y + ++ + ++ + G + L
Sbjct: 806 YEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRAL 865
Query: 157 V-KLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKL 201
+ LCK + VE A L+++M+EK + + +V VL D L G+L
Sbjct: 866 ICALCKAGQ-VEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGEL 910
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 67/156 (42%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E+G +P + +Y+ L+ C+ + +A ++V+ M++ PD Y S++ +
Sbjct: 780 MSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLE 839
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A + ++ G + Y A I C A ++ +A L D M+EK + + + +
Sbjct: 840 VDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTV 899
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFL 156
+L L M PN Q+ + L
Sbjct: 900 LVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVIL 935
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 38/184 (20%), Positives = 80/184 (43%)
Query: 22 KDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAA 81
KD E ++ +M + P + +Y++++ GL G+ +A ++K+MKE G PD
Sbjct: 766 KDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDRE 825
Query: 82 AYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRM 141
Y + + +C + A + + KG + + Y + + + L+ M
Sbjct: 826 IYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNM 885
Query: 142 MGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKL 201
+ + LV ++ ++++ ++L + M K F I +L L +GK
Sbjct: 886 LEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKS 945
Query: 202 VEAE 205
+E+E
Sbjct: 946 IESE 949
Score = 43.9 bits (102), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 51/123 (41%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E G PD Y L+ +CK+ +V+ A KI + + + Y ++I L GQ
Sbjct: 815 MKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQ 874
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A+ + M E D + + L L+ M K +PN TY +
Sbjct: 875 VEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVI 934
Query: 121 FFR 123
R
Sbjct: 935 LGR 937
>gi|357438845|ref|XP_003589699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478747|gb|AES59950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 806
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 120/226 (53%), Gaps = 5/226 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G++P++ +YN L+ C++ +V+ A K++ +M ++ PD +SYT++I + +G
Sbjct: 170 MKSEGLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGD 229
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKAR++ + + P YNA I C R ++A LM+EMV++G+ PN +Y+
Sbjct: 230 VDKARELAMKFE-----PVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYST 284
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++ S ++ RM GC PN Q+ L+K + +V A+ LWN M+ +G
Sbjct: 285 VISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREG 344
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ + L LC G + EA + +M + +P+ ++ I
Sbjct: 345 VSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTI 390
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 119/247 (48%), Gaps = 2/247 (0%)
Query: 2 REMGVK--PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVG 59
RE+ +K P + YN LI CK+ + ++A+ ++ +M D + P+VISY+++I L +G
Sbjct: 234 RELAMKFEPVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMG 293
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ + V M GC P+ + + I+ + + R+ DA GL + M+ +G+SPN YN
Sbjct: 294 NVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYN 353
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
++ + +++ +M PN + ++ + + A + WN M+
Sbjct: 354 TLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINC 413
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
G ++V + D+LC M +A MI G P+ ++F + A + E
Sbjct: 414 GCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWA 473
Query: 240 QNLSNKM 246
N+ ++M
Sbjct: 474 MNVLDQM 480
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 112/220 (50%), Gaps = 1/220 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G +P++V Y C++DV C+ ++A+ +++ M + P VI++ + I GL G+
Sbjct: 410 MINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGR 469
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A +VL +M++Y C P+ YN + A R+A GL+ E+ E+ + + TYN
Sbjct: 470 VEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIRELEERKVEFDCVTYNT 529
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDM-VEK 179
F ++ + L +M+ G +T + V + KV+ A+++ +++ EK
Sbjct: 530 IMYGFSFNGMHQQVLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKVKTAIKVLDNISAEK 589
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
F + I+ ++ +C+ EA EM+++G P+
Sbjct: 590 EFRADIITHTIILWGICNWLGTEEAVVYLHEMLKRGIFPN 629
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 99/214 (46%), Gaps = 1/214 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV P+++SY+ +I VE + + +M P+V ++TS+I G + G+
Sbjct: 270 MVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGR 329
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A + M G P+ AYN I C + +A + ++M + + PN TTY+
Sbjct: 330 VGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYST 389
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F S DL S+ + +M+ GC PN +V + + + A L ++M+ G
Sbjct: 390 IIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDG 449
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEK 214
++ + LC G+ VE + L+ +EK
Sbjct: 450 CPPTVITFNNFIKGLCRAGR-VEWAMNVLDQMEK 482
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 73/152 (48%), Gaps = 1/152 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+RE GV P++V+YN LI C D +++A + +M + I P+V +Y++II G G
Sbjct: 341 IRE-GVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGD 399
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A + +M GC P+ Y + C A L+D M+ G P T+N
Sbjct: 400 LVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNN 459
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS 152
F + + + + N+ +M CLPN ++
Sbjct: 460 FIKGLCRAGRVEWAMNVLDQMEKYECLPNIRT 491
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/155 (19%), Positives = 61/155 (39%), Gaps = 36/155 (23%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P+I +YN L+D + +A ++ ++ + + D ++Y +I+ G G + +
Sbjct: 487 PNIRTYNELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTIMYGFSFNGMHQQVLQL 546
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMD----------------------- 104
L +M G D N + YC +++ A ++D
Sbjct: 547 LGKMLVNGIKLDTITVNTTVNAYCKLGKVKTAIKVLDNISAEKEFRADIITHTIILWGIC 606
Query: 105 -------------EMVEKGLSPNATTYNLFFRVFY 126
EM+++G+ PN T+N+ R F+
Sbjct: 607 NWLGTEEAVVYLHEMLKRGIFPNIATWNVLVRGFF 641
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 57/132 (43%)
Query: 99 ASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK 158
S L+ +M + + + + + + SN ++ R+ GC P+ + ++
Sbjct: 93 VSYLLQQMKLENVPCSQELFQFVIKCYRRSNLGEQGLKMFYRIREFGCEPSVKIYNLVLD 152
Query: 159 LCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
Q ++ L+N+M +G + +VL LC GK+ A K +EM KG P
Sbjct: 153 ALLSQNLFKMINALYNNMKSEGLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDP 212
Query: 219 SQVSFRRIKALM 230
VS+ + + M
Sbjct: 213 DDVSYTTVISSM 224
>gi|255661028|gb|ACU25683.1| pentatricopeptide repeat-containing protein [Citharexylum
montevidense]
Length = 376
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 111/226 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E G D +Y L+ +CK+ K+ ++E + E + D +Y+++I GL +G+
Sbjct: 85 MKESGFVEDSTTYGILVHGFCKNGYNNKSLHVLEIAKQEGGALDAFAYSAMISGLCKMGK 144
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA VL M E GC P+ YNA I A + DA + E+ + SP TYN
Sbjct: 145 LDKAVSVLNGMIESGCKPNTQVYNALINGLLGASKFEDAIRVFKELGTRHCSPTIVTYNT 204
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+++L M+ G P+ + L+K + KVE+ALQLWN ++ KG
Sbjct: 205 LINGLCKGERFAEAYDLVKEMLEKGWNPSVITYSLLIKGLCQDHKVEMALQLWNQVISKG 264
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
F + + ++L LC +GK A + + +M P+ V++ +
Sbjct: 265 FKPDVQMHNILIHGLCSVGKTEHASELYFDMNHWNCAPNLVTYNTL 310
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 90/182 (49%), Gaps = 3/182 (1%)
Query: 1 MREMGVK---PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGL 57
+E+G + P IV+YN LI+ CK + +AY +V++M ++ +P VI+Y+ +I GL
Sbjct: 187 FKELGTRHCSPTIVTYNTLINGLCKGERFAEAYDLVKEMLEKGWNPSVITYSLLIKGLCQ 246
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
+ + A + ++ G PD +N I C + AS L +M +PN T
Sbjct: 247 DHKVEMALQLWNQVISKGFKPDVQMHNILIHGLCSVGKTEHASELYFDMNHWNCAPNLVT 306
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
YN FY D R++ ++ R++ G LP+ S +K ++ +A+ ND V
Sbjct: 307 YNTLMEGFYKGGDTRNALVIWARILRNGLLPDIISYNITLKGLCACNRISVAILFLNDAV 366
Query: 178 EK 179
K
Sbjct: 367 TK 368
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 52/113 (46%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G KPD+ +N LI C + E A ++ M + +P++++Y +++ G G A
Sbjct: 264 GFKPDVQMHNILIHGLCSVGKTEHASELYFDMNHWNCAPNLVTYNTLMEGFYKGGDTRNA 323
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
+ + G PD +YN ++ C R+ A +++ V K + P T
Sbjct: 324 LVIWARILRNGLLPDIISYNITLKGLCACNRISVAILFLNDAVTKNIVPTVIT 376
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 85/184 (46%), Gaps = 4/184 (2%)
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
G + A V KEM E PDA YNA + + A R+++ L + M +G S N ++
Sbjct: 4 GAINAAERVYKEMAESKISPDAVVYNAMLNGFFKAGRIKNCFDLWELMGREG-SRNVASF 62
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMV 177
N R + + ++ ++++ M +G + ++ + LV CK + +L +
Sbjct: 63 NTMMRGLFNNGEVDEVFSIWELMKESGFVEDSTTYGILVHGFCKNGYNNK-SLHVLEIAK 121
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP-SQVSFRRIKALMELANKQ 236
++G + LC MGKL +A MIE G KP +QV I L+ + +
Sbjct: 122 QEGGALDAFAYSAMISGLCKMGKLDKAVSVLNGMIESGCKPNTQVYNALINGLLGASKFE 181
Query: 237 EALQ 240
+A++
Sbjct: 182 DAIR 185
>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 716
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 122/218 (55%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E GV D+V+YN L++ YC+ V +A+ +V+ M + + P + +Y ++I GL G
Sbjct: 250 MEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGS 309
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A+ VL EM G P+AA +N + C + + +A + +EM+++G+ P+ +++
Sbjct: 310 YERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSS 369
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
VF + +L + + +M G G +P+T L+ R + V AL++ N+MVE+G
Sbjct: 370 IVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERG 429
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
++ + L + LC L +A++ F EM+E+G P
Sbjct: 430 CVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFP 467
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 117/241 (48%), Gaps = 1/241 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E GV PD + LI YCKD + KA + E M + PDV++Y +++ G VG+
Sbjct: 460 MVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGE 519
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA+++ +M +P +++ I +C + +A L DEM EKG+ P T N
Sbjct: 520 MEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNT 579
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + +L + + M+ G P+ + L+ ++E + A L N+M E+G
Sbjct: 580 IIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERG 639
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
++ + + G++ EAE +MI+KG P + ++ I + N +EA
Sbjct: 640 LLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAF 699
Query: 240 Q 240
+
Sbjct: 700 R 700
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 119/241 (49%), Gaps = 5/241 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV PD++S++ ++ V+ ++ ++ +A EKM+ + PD + YT +I G
Sbjct: 355 MLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDD 414
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A + EM E GC D YN + C K L DA L EMVE+G+ P+ T
Sbjct: 415 VSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTT 474
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+ ++ + +L+ M P+ + L+ CK E +E A +LW DM+ +
Sbjct: 475 LIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGE-MEKAKELWYDMISR 533
Query: 180 G-FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQE 237
F SYI S +L + C +G + EA + + EM EKG KP+ V+ IK + N +
Sbjct: 534 EIFPSYISFS-ILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSK 592
Query: 238 A 238
A
Sbjct: 593 A 593
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 105/223 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G+ P+ ++N ++ C+ V +A ++ +M + PD+IS++SI+G G+
Sbjct: 320 MLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGE 379
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++MK G PD Y I YC + A + +EMVE+G + TYN
Sbjct: 380 LGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNT 439
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
L + L+ M+ G P+ + L+ + + AL L+ M +
Sbjct: 440 LLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRS 499
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + L D C +G++ +A++ + +MI + PS +SF
Sbjct: 500 LKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISF 542
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 89/174 (51%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P +S++ LI+ +C V +A+++ ++M+++ I P +++ +II G G KA D
Sbjct: 537 PSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDF 596
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L M G PD YN I ++ + A L++ M E+GL PN TYN F
Sbjct: 597 LNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSR 656
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
++ + + +M+ G P+ + L+ ++ ++ A ++ ++M+++GF
Sbjct: 657 HGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQRGF 710
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 81/149 (54%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E G+KP +V+ N +I Y + + KA + M E + PD I+Y ++I
Sbjct: 565 MKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEEN 624
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A ++ M+E G P+ YNA + + R+++A ++ +M++KG++P+ +TY
Sbjct: 625 FDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTS 684
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPN 149
+ ++++ ++ ++ M+ G +P+
Sbjct: 685 LINGYVSKDNMKEAFRVHDEMLQRGFVPD 713
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 97/224 (43%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+R+ G I + N L+ K V+ A+K+ E +V + ++ L G+
Sbjct: 180 LRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDFVKSGNIVNVYTLNIMVNALCKDGK 239
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D L EM+E G Y D YN + YC + +A GL+D M KGL P TYN
Sbjct: 240 LDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNA 299
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCM-FLVKLCKRQEKVEIALQLWNDMVEK 179
+ + M+G G PN + LV+ C R+E V A +++N+M+++
Sbjct: 300 LINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESC-RKEDVWEAERVFNEMLQR 358
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G ++ + + G+L A F +M G P V +
Sbjct: 359 GVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIY 402
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 93/217 (42%)
Query: 10 IVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLK 69
+V ++ LI Y + R++ + + + +R + + +++G + VG D A V +
Sbjct: 154 VVVFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYE 213
Query: 70 EMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSN 129
+ + G + N + C +L + + EM EKG+ + TYN +
Sbjct: 214 DFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRG 273
Query: 130 DLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSD 189
+ ++ L M G G P + L+ ++ E A ++ ++M+ G +
Sbjct: 274 LVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFN 333
Query: 190 VLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ C + EAE+ F EM+++G P +SF I
Sbjct: 334 PMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSI 370
>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
Length = 740
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 120/251 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G++P ++++N LI++ K +V +A I+ ++ D+SPDV +YTS+I G
Sbjct: 189 MLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRN 248
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A V M + GC P++ Y+ I C R+ +A +++EM+EKG+ P TY L
Sbjct: 249 LDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTL 308
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L RM GC PN Q+ L+ R K+E+A+ L++ M+++G
Sbjct: 309 PITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEG 368
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ + L + LC G+ A K F M G + ++ I + L E
Sbjct: 369 LVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAM 428
Query: 241 NLSNKMALFGP 251
L KM GP
Sbjct: 429 VLFEKMLKMGP 439
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 110/223 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E G +PD +YN L+ + K ++E A ++M + ++P+ +SYT++I G G+
Sbjct: 469 MKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGK 528
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A +LK M+E GC P+ +YNA I R +A + D+MVE+GL PN TY
Sbjct: 529 VDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTT 588
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + ++ ++ M CLPN + L+ ++ K + A L +M KG
Sbjct: 589 LIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKG 648
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ L D +G++ A M++ G KP+ ++
Sbjct: 649 LAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTY 691
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 104/226 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +MG P +V+YN LI+ Y V A ++++ M++ PD +Y ++ G G+
Sbjct: 434 MLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGK 493
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A +EM E G P+ +Y A I + ++ A L+ M E G +PN +YN
Sbjct: 494 LESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNA 553
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
N + + +M+ G LPN + L+ R + + A ++++DM ++
Sbjct: 554 VINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRK 613
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ L LC GK EAE EM KG P +V+F +
Sbjct: 614 CLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSL 659
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 103/226 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ P+ V+YN LI+ C + A KI M + +Y II GL L G
Sbjct: 364 MLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGD 423
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA + ++M + G P YN I Y + +A+ L+D M E G P+ TYN
Sbjct: 424 IEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNE 483
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F L S+ + M+ G PN S L+ + KV+IAL L M E G
Sbjct: 484 LVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMG 543
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + + + L + EAEK +M+E+G P+ +++ +
Sbjct: 544 CNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTL 589
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 108/221 (48%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ PD+ +Y LI +C++R ++ A+ + ++M E P+ ++Y+++I GL G+ D+A
Sbjct: 229 LSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEAL 288
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
D+L+EM E G P Y I C + +A L+ M ++G PN TY
Sbjct: 289 DMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGL 348
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
L + LY +M+ G +PNT + L+ + AL++++ M G +
Sbjct: 349 SRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANT 408
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + LC G + +A F +M++ G P+ V++ +
Sbjct: 409 QTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTL 449
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 96/213 (45%), Gaps = 5/213 (2%)
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
+ AR++ K+M G P +N I ++R+A ++ ++ + LSP+ TY
Sbjct: 180 EGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSL 239
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
+ +L ++ ++ RM+ GC PN+ + L+ + +V+ AL + +M+EKG
Sbjct: 240 ILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGI 299
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQN 241
+ + LC + EA + M ++G +P+ ++ + + + K E
Sbjct: 300 EPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIG 359
Query: 242 LSNKMALFGPSMIPKREEYLA---EMSASDSFS 271
L +KM G ++P Y A E+ FS
Sbjct: 360 LYHKMLKEG--LVPNTVTYNALINELCVGGRFS 390
>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
Length = 762
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 112/215 (52%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G++ + +YN LI+ CK +++A + + M + PDV +YT++I L G+
Sbjct: 495 MSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGE 554
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A D+L+EM + G P YN + +C++ R+ L++ M+EK + PNATTYN
Sbjct: 555 LDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNS 614
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + N+++S+ +Y M PN + L+K + ++ A N+M+EKG
Sbjct: 615 LMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKG 674
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
F L LL K VEA K F +M ++G
Sbjct: 675 FRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEG 709
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 115/225 (51%), Gaps = 16/225 (7%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+KPD+ +Y LID CK ++++A+ ++++M D I P +++Y ++ G + G+
Sbjct: 530 MDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGR 589
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ + +L+ M E +P+A YN+ ++ YCI ++ + + M + + PN TYN+
Sbjct: 590 VEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNI 649
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + ++ + + M+ G S L++L +++K A +L++DM ++G
Sbjct: 650 LIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEG 709
Query: 181 FGSYILVSDVLFDL------------LCDMGKLVEAE--KSFLEM 211
F + V + D LCD +LVEA KS EM
Sbjct: 710 FTAEPDVYNFYIDFNFNEDNLEATLALCD--ELVEASIVKSKAEM 752
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 97/214 (45%), Gaps = 2/214 (0%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
EM PD+V+Y LI YC ++E A K+++ M + P+ YTS++ L G+
Sbjct: 287 EMASPPDVVTYGILIHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVS 346
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
A V+++M + D A Y + +C L A DEM KGL+ + TY
Sbjct: 347 DALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLI 406
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGF 181
+ +L+ + + M+ + + LV CKR + E A Q+ N MV++G
Sbjct: 407 NGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAE-AFQVHNTMVQRGV 465
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
++ L D LC G + A + EM KG
Sbjct: 466 APNVVTYTALSDGLCKQGDVQAANELLHEMSNKG 499
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 108/228 (47%), Gaps = 4/228 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G+ D V+Y LI+ C+ ++++A K++++M + D ++YT ++ G G+
Sbjct: 390 MQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGK 449
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A V M + G P+ Y A C ++ A+ L+ EM KGL NA TYN
Sbjct: 450 MAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNS 509
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEK 179
+ L + M G P+ + L+ LCK E ++ A L +M++
Sbjct: 510 LINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGE-LDRAHDLLQEMLDN 568
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLE-MIEKGHKPSQVSFRRI 226
G I+ +VL + C G+ VE K LE M+EK P+ ++ +
Sbjct: 569 GIKPTIVTYNVLMNGFCMSGR-VEGGKKLLEWMLEKNIHPNATTYNSL 615
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 98/224 (43%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV+P+ Y ++ + C +V A +VE M + D YT+++ G G
Sbjct: 320 MVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGD 379
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
AR EM+ G D Y I C A L++A ++ EM+ + L + TY +
Sbjct: 380 LVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTV 439
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+ + ++ ++ M+ G PN + L LCK Q V+ A +L ++M K
Sbjct: 440 LVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCK-QGDVQAANELLHEMSNK 498
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G + L + LC G L +A ++ +M G KP ++
Sbjct: 499 GLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTY 542
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 100/216 (46%), Gaps = 2/216 (0%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
D Y ++ +C + A + ++M+ + ++ D ++YT++I GL G+ +A VL
Sbjct: 363 DEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVL 422
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
+EM D Y + YC ++ +A + + MV++G++PN TY
Sbjct: 423 QEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQ 482
Query: 129 NDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYILV 187
D++++ L M G N + L+ LCK ++ A++ DM G +
Sbjct: 483 GDVQAANELLHEMSNKGLELNACTYNSLINGLCK-AGYLDQAMRTMADMDAAGLKPDVYT 541
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
L D LC G+L A EM++ G KP+ V++
Sbjct: 542 YTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTY 577
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 111/241 (46%), Gaps = 7/241 (2%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
++ SYN L+ V C +VE A ++ ++M PDV++Y +I G +G+ + A +L
Sbjct: 261 NVCSYNILLKVLCGAGRVEDARQLFDEMAS---PPDVVTYGILIHGYCALGELENAVKLL 317
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
+M G P+A Y + + C R+ DA ++++MV + + Y F
Sbjct: 318 DDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNK 377
Query: 129 NDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVS 188
DL S+ + M G + + L+ R +++ A ++ +M+ + +
Sbjct: 378 GDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTY 437
Query: 189 DVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALM----ELANKQEALQNLSN 244
VL D C GK+ EA + M+++G P+ V++ + + ++ E L +SN
Sbjct: 438 TVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSN 497
Query: 245 K 245
K
Sbjct: 498 K 498
>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
Length = 725
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 111/227 (48%), Gaps = 1/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G P++ SYN ++ +CK +VE A ++E+M PDV+SYT++I GL + Q
Sbjct: 70 MVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQ 129
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A V+ +M + GC P+ Y + +C L A L+ +M E+G PNA TYN
Sbjct: 130 VDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNN 189
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTG-CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
L S+ L+ M +G C P+ + +V + KV+ A +L MV K
Sbjct: 190 IMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSK 249
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G ++ L LC GKL EA M G P+ V++ I
Sbjct: 250 GCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTI 296
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 116/227 (51%), Gaps = 1/227 (0%)
Query: 1 MREMG-VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVG 59
M E G PD+ +Y+ ++D K +V+ A ++VE M + SP+V++Y+S++ GL G
Sbjct: 210 MEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAG 269
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ D+A +L+ M GC P+ YN I +C R+ +A L++EMV+ G PN TY
Sbjct: 270 KLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYT 329
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ F + L M+ G +PN + L+ + ++++VE A QL + M++K
Sbjct: 330 VLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQK 389
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G ++ + + LC K+ E +M+ P V+F I
Sbjct: 390 GCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTI 436
Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 118/236 (50%), Gaps = 1/236 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDE-DISPDVISYTSIIGGLGLVG 59
M E G +P+ ++YN ++ C R+++ A ++ ++M + PDV +Y++I+ L G
Sbjct: 175 MTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSG 234
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ D A +++ M GC P+ Y++ + C A +L +A+ L+ M G SPN TYN
Sbjct: 235 KVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYN 294
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ +++L M+ GC PN + L+ + K E A+ L MVEK
Sbjct: 295 TIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEK 354
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANK 235
G+ + + L D+ C ++ A + MI+KG P+ VS+ + A + A K
Sbjct: 355 GYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATK 410
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 116/226 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P++V+Y+ L+ CK ++++A ++++M SP++++Y +II G +G+
Sbjct: 246 MVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGR 305
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A +L+EM + GC P+ Y + +C + DA GL++ MVEKG PN TYN
Sbjct: 306 IDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNS 365
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+F +++ + L M+ GC+PN S ++ + KV + L M+
Sbjct: 366 LLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNN 425
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
I+ + + D +C ++ A + F + E G P+ V++ +
Sbjct: 426 CVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSL 471
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 121/254 (47%), Gaps = 3/254 (1%)
Query: 2 REMG--VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVG 59
REM PD V+YN +I+ K +++ A +++E+M D +P+V SY +++ G
Sbjct: 34 REMSKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKAN 93
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ + A +L++M GC PD +Y I C ++ +A +MD+M+++G PN TY
Sbjct: 94 RVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYG 153
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
F DL + L +M G PN + ++ K++ ALQL+ +M E
Sbjct: 154 TLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEES 213
Query: 180 G-FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEA 238
G + + D L GK+ +A + M+ KG P+ V++ + + A K +
Sbjct: 214 GSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDE 273
Query: 239 LQNLSNKMALFGPS 252
L +M G S
Sbjct: 274 ATALLQRMTRSGCS 287
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 113/225 (50%), Gaps = 3/225 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G +P++V+Y L+D +CK + E A +VE M ++ P++ +Y S++ +
Sbjct: 316 MVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDE 375
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A +L M + GC P+ +YN I C A ++ + L+++M+ P+ T+N
Sbjct: 376 VERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNT 435
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+ + ++ L+ + +GC PN + LV LCK + + + A L +M K
Sbjct: 436 IIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSR-RFDQAEYLLREMTRK 494
Query: 180 -GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G I+ + + D LC ++ A K FL+M+ G P V++
Sbjct: 495 QGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTY 539
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 128/273 (46%), Gaps = 5/273 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKA-YKIVEKMRDEDISPDVISYTSIIGGLGLVG 59
++E G P++V+YN L+ CK R+ ++A Y + E R + SPD+I+Y ++I GL
Sbjct: 456 IQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSK 515
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ D+A + +M G PD Y+ I + C + + +A+ +++ M++ G P A TY
Sbjct: 516 RVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYG 575
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
F + +L + + ++ G P+ + + ++ ++ A +L M+
Sbjct: 576 TLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRA 635
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEA 238
G + + L CD + +A F M + G +P ++ + L++ + ++
Sbjct: 636 GLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDL 695
Query: 239 LQNLSNKMALFGPSMIPKREEYLAEMSASDSFS 271
L +S M G + E +++ AS S S
Sbjct: 696 LAEVSKSMVDTGFKL---NHELSSKLEASVSAS 725
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 93/179 (51%), Gaps = 1/179 (0%)
Query: 48 YTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMV 107
+ SI+ GL GQ A +EM + C PD+ YN I + RL DA L++EMV
Sbjct: 13 HKSILRGLCDAGQCSDAVLHFREMSKT-CPPDSVTYNTMINGLSKSDRLDDAIRLLEEMV 71
Query: 108 EKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVE 167
+ G +PN +YN F +N + ++ L +M+ GC P+ S ++ + ++V+
Sbjct: 72 DNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVD 131
Query: 168 IALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
A ++ + M+++G ++ L D C +G L A + +M E+G++P+ +++ I
Sbjct: 132 EACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNI 190
>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
Length = 755
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 118/260 (45%), Gaps = 39/260 (15%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G PD+V+YN +I+ + ++ QVEKAY + +M D+ I P+V++YT++I GL
Sbjct: 152 MSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQV 211
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNY------------------------------ 90
D+A+ V ++M + G PD YN I Y
Sbjct: 212 VDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYAL 271
Query: 91 -----CIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
C R R+A D M KG+ P+ Y + + L + M+G G
Sbjct: 272 LLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNG 331
Query: 146 CLPNTQSCMFLVKLCKRQEK--VEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVE 203
PN + +F + C +K +E A+ ++N M ++G ++ L D LC +G++ +
Sbjct: 332 VSPNRR--IFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDD 389
Query: 204 AEKSFLEMIEKGHKPSQVSF 223
A F +MI +G P+ F
Sbjct: 390 AVLQFNQMINEGVTPNIFVF 409
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 110/217 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G+ PD+VS+ LID CK +V+ A +M +E ++P++ ++S++ GL VG+
Sbjct: 362 MRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGK 421
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA ++ E+ + G DA +N + N C R+ +A L+D M+ G+ PN +YN
Sbjct: 422 WEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNT 481
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + L M+ G PN + L++ + +V+ A L+ +M+ KG
Sbjct: 482 LVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKG 541
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHK 217
+ + + L G+ EA + +L MI K
Sbjct: 542 VTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTK 578
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 105/215 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GVKPD +YNCLI Y + ++ +++E+M + PD I+Y ++ L G+
Sbjct: 222 MIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGR 281
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR M G PD A Y + Y L + +D MV G+SPN +N+
Sbjct: 282 CREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNI 341
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + + + +++ +M G P+ S L+ + +V+ A+ +N M+ +G
Sbjct: 342 MFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEG 401
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
I V L LC +GK +AE+ F E++++G
Sbjct: 402 VTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQG 436
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 117/251 (46%), Gaps = 13/251 (5%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVE-KMRDEDISPDVISYTSIIGGLGLVGQP 61
+ G + +++ + L+ C ++V++A I+ +M + PDV++Y ++I G GQ
Sbjct: 118 KTGWRVNVIVISQLLKGLCDAKRVDEATDILLLRMSEFGCPPDVVAYNTVINGFFREGQV 177
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
+KA ++ EM + G P+ Y I C A+ + A G+ +M+++G+ P+ TYN
Sbjct: 178 EKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCL 237
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKG 180
+ + + + M G P+ + L+ LCK E L ++ M KG
Sbjct: 238 IHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARL-FFDSMFRKG 296
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLE-MIEKGHKPSQVSFRRIKALMELANKQEAL 239
+ + +L G L E SFL+ M+ G P+ RRI +M A ++A+
Sbjct: 297 IKPDVAIYAILLHGYATKGALSEMH-SFLDLMVGNGVSPN----RRIFNIMFCAYAKKAM 351
Query: 240 ----QNLSNKM 246
++ NKM
Sbjct: 352 IEEAMHIFNKM 362
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 100/222 (45%), Gaps = 4/222 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +GV+P+++SYN L+ +C ++++A K+++ M + P+ +YT ++ G +
Sbjct: 467 MIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARR 526
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A + +EM G P A YN + R +A+ L M+ + TYN+
Sbjct: 527 VDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNI 586
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMF--LVKLCKRQEKVEIALQLWNDMVE 178
+N + ++ ++ R+ P S F ++ + + E A+ L+ +
Sbjct: 587 ILNGLCKNNFVDEAFKMFRRLCSKD--PQLDSVTFNIMIGALLKGGRKEDAMDLFATISA 644
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQ 220
G ++ ++ + L + G L E + F M + G P+
Sbjct: 645 YGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNS 686
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 1/134 (0%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
K DI +YN +++ CK+ V++A+K+ ++ +D D +++ +IG L G+ + A
Sbjct: 577 TKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAM 636
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
D+ + YG PD Y N L + GL M + G +PN+ N R
Sbjct: 637 DLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALVRRL 696
Query: 126 YWSNDL-RSSWNLY 138
D+ R+ LY
Sbjct: 697 LHRGDISRAGVYLY 710
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 73/193 (37%), Gaps = 35/193 (18%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+KP+ +Y L+ YCK R+V+ AY + +M + ++P V +Y +I+ GL G+
Sbjct: 502 MVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGR 561
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYC----------IAKRL-------------- 96
+A ++ M D YN + C + +RL
Sbjct: 562 FSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNI 621
Query: 97 -----------RDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
DA L + GL P+ TY L L L+ M +G
Sbjct: 622 MIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSG 681
Query: 146 CLPNTQSCMFLVK 158
PN+ LV+
Sbjct: 682 TAPNSHMLNALVR 694
>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 125/252 (49%), Gaps = 4/252 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E V P+ V++ LID CK R + +A+ + E M ++ + PDV +Y +++ G Q
Sbjct: 141 MVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQ 200
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A+ + M GC P+ +YN I +C + R+ +A GL+ EM K L+P+ TY+
Sbjct: 201 MDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYST 260
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEK 179
R F + + L M G LPN + + L LCK E A +L M E
Sbjct: 261 LMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDE-AFELLKAMQES 319
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEA 238
I + +L + +C GKL A + F + KG +P+ V++ I L++ EA
Sbjct: 320 KIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEA 379
Query: 239 LQNLSNKMALFG 250
+ L +MA+ G
Sbjct: 380 CE-LFREMAVNG 390
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 109/223 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G KP++V+YN +ID CKDR V +A +M E I PDV +Y+SI+ G +G+
Sbjct: 71 MEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGR 130
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A + K+M E P+ + I C + + +A + + M EKGL P+ TYN
Sbjct: 131 VNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNA 190
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + + L+ M GC PN +S L+ + +++ A L +M K
Sbjct: 191 LVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKS 250
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I L C +G+ EA++ EM G P+ +++
Sbjct: 251 LTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITY 293
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 118/224 (52%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++G++P +V++N L+ C ++ A K+ ++M PDVI+Y++II GL +G
Sbjct: 1 MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +LK+M+E GC P+ AYN I + C + + +A EMV++G+ P+ TY+
Sbjct: 61 TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
F + + +L+ +M+ +PN + L+ LCK++ E A ++ M EK
Sbjct: 121 ILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISE-AWLVFETMTEK 179
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G + + L D C ++ EA+K F M KG P+ S+
Sbjct: 180 GLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSY 223
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 127/258 (49%), Gaps = 6/258 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +MG +PD+++Y+ +I+ CK A ++++KM ++ P+V++Y +II L
Sbjct: 36 MVKMGHEPDVITYSTIINGLCKMGNTTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRL 95
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A D EM + G PD Y++ + +C R+ +A+ L +MVE+ + PN T+ +
Sbjct: 96 VTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTI 155
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+ +W ++ M G P+ + LV C R + E A +L+N M K
Sbjct: 156 LIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDE-AQKLFNIMDRK 214
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI-KALMELANKQEA 238
G + ++L + C G++ EA+ EM K P ++ + + ++ QEA
Sbjct: 215 GCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEA 274
Query: 239 LQNLSNKMALFG--PSMI 254
Q L +M +G P++I
Sbjct: 275 -QELLKEMCSYGLLPNLI 291
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 109/226 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G++PD+ +YN L+D YC Q+++A K+ M + +P+V SY +I G G+
Sbjct: 176 MTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGR 235
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A+ +L EM PD Y+ +R +C R ++A L+ EM GL PN TY++
Sbjct: 236 IDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSI 295
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
L ++ L M + PN L++ K+E A +L++++ KG
Sbjct: 296 VLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKG 355
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ V+ L G EA + F EM G P+ ++ I
Sbjct: 356 IQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVI 401
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 97/218 (44%), Gaps = 35/218 (16%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P++ SYN LI+ +CK ++++A ++ +M + ++PD+ +Y++++ G VG+
Sbjct: 211 MDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGR 270
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVE------------ 108
P +A+++LKEM YG P+ Y+ + C L +A L+ M E
Sbjct: 271 PQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTI 330
Query: 109 -----------------------KGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
KG+ P TY + + L+ M G
Sbjct: 331 LIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNG 390
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
CLPN+ + +++ R A++L +MV KGF +
Sbjct: 391 CLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGFSA 428
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 51/121 (42%)
Query: 106 MVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEK 165
M + GL P T+N + + L+ M+ G P+ + ++ +
Sbjct: 1 MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60
Query: 166 VEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR 225
+ALQL M EKG ++ + + D LC + EA F EM+++G P ++
Sbjct: 61 TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120
Query: 226 I 226
I
Sbjct: 121 I 121
>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 822
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 120/251 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G++P ++++N LI++ K +V +A I+ ++ D+SPDV +YTS+I G
Sbjct: 189 MLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRN 248
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A V M + GC P++ Y+ I C R+ +A +++EM+EKG+ P TY L
Sbjct: 249 LDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTL 308
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L RM GC PN Q+ L+ R K+E+A+ L++ M+++G
Sbjct: 309 PITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEG 368
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ + L + LC G+ A K F M G + ++ I + L E
Sbjct: 369 LVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAM 428
Query: 241 NLSNKMALFGP 251
L KM GP
Sbjct: 429 VLFEKMLKMGP 439
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 109/220 (49%), Gaps = 4/220 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E G +PD +YN L+ + K ++E A ++M + ++P+ +SYT++I G G+
Sbjct: 469 MKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGK 528
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A +LK M+E GC P+ +YNA I R +A + D+MVE+GL PN TY
Sbjct: 529 VDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTT 588
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + ++ ++ M CLPN + L+ ++ K + A ++ E
Sbjct: 589 LIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAERMSEIGCEPT 648
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQ 220
+Y L LC G+ EAE+ +M E+G P +
Sbjct: 649 LDTY----STLVSGLCRKGRFYEAEQLVKDMKERGFCPDR 684
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 103/226 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G + +YN +I C +EKA + EKM P V++Y ++I G G
Sbjct: 399 MEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGN 458
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A +L MKE GC PD YN + + +L AS EMVE GL+PN +Y
Sbjct: 459 VNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTA 518
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + +L RM GC PN +S ++ ++ + A ++ + MVE+G
Sbjct: 519 LIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQG 578
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ L D LC G+ A K F +M ++ P+ ++ +
Sbjct: 579 LLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSL 624
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 103/226 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ P+ V+YN LI+ C + A KI M + +Y II GL L G
Sbjct: 364 MLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGD 423
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA + ++M + G P YN I Y + +A+ L+D M E G P+ TYN
Sbjct: 424 IEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNE 483
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F L S+ + M+ G PN S L+ + KV+IAL L M E G
Sbjct: 484 LVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMG 543
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + + + L + EAEK +M+E+G P+ +++ +
Sbjct: 544 CNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTL 589
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 108/221 (48%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ PD+ +Y LI +C++R ++ A+ + ++M E P+ ++Y+++I GL G+ D+A
Sbjct: 229 LSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEAL 288
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
D+L+EM E G P Y I C + +A L+ M ++G PN TY
Sbjct: 289 DMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGL 348
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
L + LY +M+ G +PNT + L+ + AL++++ M G +
Sbjct: 349 SRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANT 408
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + LC G + +A F +M++ G P+ V++ +
Sbjct: 409 QTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTL 449
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 99/202 (49%), Gaps = 6/202 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+ P++++Y LID C++ + + A+KI M P++ +Y+S+I GL G+
Sbjct: 574 MVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGK 633
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + M E GC P Y+ + C R +A L+ +M E+G P+ Y
Sbjct: 634 ADEA----ERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYS 689
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEK 179
+ ++ + ++ + G + L+ LCK + VE A L+++M+EK
Sbjct: 690 LLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQ-VEEAQALFDNMLEK 748
Query: 180 GFGSYILVSDVLFDLLCDMGKL 201
+ + +V VL D L G+L
Sbjct: 749 EWNADEIVWTVLVDGLLKEGEL 770
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 96/213 (45%), Gaps = 5/213 (2%)
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
+ AR++ K+M G P +N I ++R+A ++ ++ + LSP+ TY
Sbjct: 180 EGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSL 239
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
+ +L ++ ++ RM+ GC PN+ + L+ + +V+ AL + +M+EKG
Sbjct: 240 ILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGI 299
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQN 241
+ + LC + EA + M ++G +P+ ++ + + + K E
Sbjct: 300 EPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIG 359
Query: 242 LSNKMALFGPSMIPKREEYLA---EMSASDSFS 271
L +KM G ++P Y A E+ FS
Sbjct: 360 LYHKMLKEG--LVPNTVTYNALINELCVGGRFS 390
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 67/156 (42%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E+G +P + +Y+ L+ C+ + +A ++V+ M++ PD Y S++ +
Sbjct: 640 MSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLE 699
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A + ++ G + Y A I C A ++ +A L D M+EK + + + +
Sbjct: 700 VDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTV 759
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFL 156
+L L M PN Q+ + L
Sbjct: 760 LVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVIL 795
Score = 43.9 bits (102), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 51/123 (41%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E G PD Y L+ +CK+ +V+ A KI + + + Y ++I L GQ
Sbjct: 675 MKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQ 734
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A+ + M E D + + L L+ M K +PN TY +
Sbjct: 735 VEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVI 794
Query: 121 FFR 123
R
Sbjct: 795 LGR 797
>gi|334183972|ref|NP_177860.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806398|sp|Q9FVX2.2|PP129_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g77360, mitochondrial; Flags: Precursor
gi|332197848|gb|AEE35969.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 517
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 132/248 (53%), Gaps = 4/248 (1%)
Query: 2 REM---GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLV 58
REM G PDIV+Y+ ++D+ CK +V++A IV M P Y+ ++ G
Sbjct: 261 REMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTE 320
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
+ ++A D EM+ G D A +N+ I +C A R+++ ++ EM KG++PN+ +
Sbjct: 321 NRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSC 380
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
N+ R + +++++ +M+ C P+ + ++K+ ++++E A ++W M +
Sbjct: 381 NIILRHLIERGEKDEAFDVFRKMIKV-CEPDADTYTMVIKMFCEKKEMETADKVWKYMRK 439
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEA 238
KG + VL + LC+ +A EMIE G +PS V+F R++ L+ +++
Sbjct: 440 KGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEEREDV 499
Query: 239 LQNLSNKM 246
L+ L+ KM
Sbjct: 500 LKFLNEKM 507
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/237 (20%), Positives = 105/237 (44%), Gaps = 2/237 (0%)
Query: 10 IVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLK 69
+ +Y+ +I+ K RQ + + ++ MR + + +V ++ ++ + D+A
Sbjct: 134 VRAYHMMIESTAKIRQYKLMWDLINAMRKKKM-LNVETFCIVMRKYARAQKVDEAIYAFN 192
Query: 70 EMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSN 129
M++Y P+ A+N + C +K +R A + + M ++ +P++ TY++ +
Sbjct: 193 VMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDR-FTPDSKTYSILLEGWGKEP 251
Query: 130 DLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSD 189
+L + ++ M+ GC P+ + +V + + +V+ AL + M +
Sbjct: 252 NLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYS 311
Query: 190 VLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKM 246
VL +L EA +FLEM G K F + AN+ + + + +M
Sbjct: 312 VLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEM 368
>gi|124360979|gb|ABN08951.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 511
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 122/257 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G KPD VS+ ID YCK + A +++E+M V + T++I G GLV
Sbjct: 242 MVKRGFKPDSVSFGIRIDAYCKKGRFGDALRLLEEMESRKFVVSVETITTLIHGAGLVQN 301
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
P KA + E+ D+ YNA I + + A LMD M+EK + P+ TY+
Sbjct: 302 PGKAWQLFNEIPLRNLVVDSGVYNALITTLVRNRDVVSALSLMDGMIEKQILPDGVTYHT 361
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F S + LY +M +P T++ + L+K +++++L LWN +VEKG
Sbjct: 362 IFLGLMKSRGIEGVSELYQKMTKRKFVPKTRTVVVLMKYFCHNSRLDLSLSLWNYLVEKG 421
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ D+L LC G + EA + +E+G S +F ++ L++ + + L+
Sbjct: 422 HCPHAHALDLLVTGLCSRGLVQEAFSCSKQTLERGRYISSTAFLMLERLLKQSRDVDKLK 481
Query: 241 NLSNKMALFGPSMIPKR 257
L + + P R
Sbjct: 482 ELDQMIKKLRSVLPPSR 498
>gi|449488099|ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Cucumis sativus]
Length = 548
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 110/207 (53%), Gaps = 2/207 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD+ S+N LI C+ +++KA++ + M + PD++SY ++I G V + K D+
Sbjct: 212 PDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDL 271
Query: 68 LKE-MKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
LKE M G PD Y + I YC ++ AS L DEMV G+ PN T+N+ F
Sbjct: 272 LKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFG 331
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
++RS+ +Y +M+ GCLP+ + L+ R+ +V L+LW +M + +
Sbjct: 332 KVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVY 391
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIE 213
VL + LC ++ EA ++FL ++
Sbjct: 392 TYAVLINALCKENRIREA-RNFLRHLK 417
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 116/260 (44%), Gaps = 8/260 (3%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV PD+++Y +I YCK ++ A ++ ++M I P+ ++ +I G G VG A
Sbjct: 280 GVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSA 339
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ ++M GC PD + + I YC + L +EM + LSPN TY +
Sbjct: 340 MVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINA 399
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
N +R + N + + +P ++ + KV+ A + +M EK
Sbjct: 400 LCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPD 459
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELAN--------KQ 236
+ +L C G++VEA +F +MIE P +++ + + + A KQ
Sbjct: 460 KITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEASQIKQ 519
Query: 237 EALQNLSNKMALFGPSMIPK 256
ALQ L+ ++ G + K
Sbjct: 520 AALQKLNLGLSSLGSPLTRK 539
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 79/149 (53%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G PD+V++ LID YC++ +V + K+ E+M+ ++SP+V +Y +I L +
Sbjct: 346 MLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENR 405
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR+ L+ +K P YN I +C A ++ +A+ ++ EM EK P+ T+ +
Sbjct: 406 IREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTI 465
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPN 149
+ + + + +M+ C+P+
Sbjct: 466 LIIGNCMKGRMVEAISTFYKMIEINCVPD 494
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 107/251 (42%), Gaps = 5/251 (1%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
+ + +Y+ L+ CK + A + + MR + I PD ++ +G+ D
Sbjct: 102 HLSINHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLD 161
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRD-ASGLMDEMVEKGLSPNATTYNLF 121
A++ L E+ YG YN + N + + L D A L E +E P+ ++N+
Sbjct: 162 SAKNFLNEVHCYGIKVSPFVYNNLL-NMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNIL 220
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKG 180
R ++ ++ + M GC P+ S L+ C+ E + L DM+ KG
Sbjct: 221 IRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKG 280
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEAL 239
++ + C +G + A + F EM+ G KP+ +F I ++ N + A+
Sbjct: 281 VSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAM 340
Query: 240 QNLSNKMALFG 250
+ KM L G
Sbjct: 341 V-MYEKMLLLG 350
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 58/119 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ + P++ +Y LI+ CK+ ++ +A + ++ ++ P Y +I G G+
Sbjct: 381 MKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGK 440
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
D+A ++ EM+E C PD + I C+ R+ +A +M+E P+ T N
Sbjct: 441 VDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITIN 499
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 90/224 (40%), Gaps = 1/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G+ PD L+ Y + +++ A + ++ I Y +++ L
Sbjct: 135 MRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNL 194
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + +E E PD ++N IR C + A M G P+ +YN
Sbjct: 195 VDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNT 254
Query: 121 FFRVFYWSNDLRSSWNLYCR-MMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
F N++ +L M+ G P+ + ++ + ++ A +L+++MV
Sbjct: 255 LINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSS 314
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G +VL D +G + A + +M+ G P V+F
Sbjct: 315 GIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTF 358
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 122/237 (51%), Gaps = 2/237 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E GVKP +V+YN LI + K + +AY ++++M+ PDV++Y+ +I GL Q
Sbjct: 245 MKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQ 304
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A VLK+M++ GC PD YN I A L DA L D M KG +P+ TY+
Sbjct: 305 LDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYST 364
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + S+ L+ M G P+ + ++ + + +V+ A +L+++M KG
Sbjct: 365 LITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKG 424
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQE 237
++ + + L G+ EA K F +M E G P ++ + L+ L+ +E
Sbjct: 425 LSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDAL--LLGLSKTKE 479
Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 120/239 (50%), Gaps = 1/239 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MRE G PD +YN LI K + +KA +++E+M PDV++Y+S+I GLG G+
Sbjct: 140 MRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGE 199
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA + +EMK G PD+ + A + A R+ DA L+DEM E+G+ P TYN
Sbjct: 200 TVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNA 259
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F DL ++NL M GC P+ + L+ + +++ A Q+ M ++G
Sbjct: 260 LIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEG 319
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEA 238
+ + L + L G L +A + F M KG P V++ I AL + A + A
Sbjct: 320 CPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESA 378
Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 114/223 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G KPD +++ L+D K +V+ A +++++M++ + P V++Y ++I G G VG
Sbjct: 210 MKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGD 269
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++L EMK GC PD Y+ I A +L +A ++ +M ++G P+ TYN
Sbjct: 270 LVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNT 329
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L + L+ RM GC P+ + L+ + +VE A L+ +M G
Sbjct: 330 LINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVG 389
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + +L G++ +A++ F EM KG P +++
Sbjct: 390 IQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITY 432
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 119/243 (48%), Gaps = 1/243 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G KP++ +YN L+D K Q ++A +++ +MRD PDV +Y +I LG G+
Sbjct: 70 MQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGR 129
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + EM+E GC PD YN+ I R + A L++EM G P+ TY+
Sbjct: 130 LSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSS 189
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ L+ M G P++ + L+ + +V+ AL+L ++M E+G
Sbjct: 190 LITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERG 249
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEAL 239
++ + L +G LVEA EM G KP V++ I L++ + EA
Sbjct: 250 VKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEAC 309
Query: 240 QNL 242
Q L
Sbjct: 310 QVL 312
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 115/228 (50%), Gaps = 3/228 (1%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P++V+YN L++ K Q E+A + E+++ +PDV+SY+ +I LG G+ + A +V
Sbjct: 7 PNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEV 66
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
+ EM+ GC P+ YN + A + +A L+ EM + G P+ TYN
Sbjct: 67 VAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGK 126
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ L ++ L+ M GC+P+T + L+ + + + A++L +M G ++
Sbjct: 127 AGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMT 186
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANK 235
L L G+ V+A K F EM +G KP ++F ALM+ K
Sbjct: 187 YSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITF---TALMDALGK 231
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 122/280 (43%), Gaps = 36/280 (12%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G KPD+V+Y+CLI K Q+++A ++++KM E PD I+Y ++I GLG G
Sbjct: 280 MKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGL 339
Query: 61 PDKARDVLKEMKEYGCYPDAAAYN---------AAIRNYCI------------------- 92
+ A + MK GC PD Y+ A + + C+
Sbjct: 340 LNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCS 399
Query: 93 -------AKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
A ++ DA L EM KGLSP+ TYN F + + ++ M +G
Sbjct: 400 IITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESG 459
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
LP+ + L+ + ++V+ A L +++E+G L D ++L G + EA
Sbjct: 460 LLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAH 519
Query: 206 KSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLSN 244
+ KG P S+ I AL + EA L +
Sbjct: 520 ELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLED 559
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 118/256 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G PD+V+Y+ LI K +VE A + E+M I PD+ +Y SII LG GQ
Sbjct: 350 MKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQ 409
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A + EM+ G PD YNA + + R ++A + ++M E GL P+ TY+
Sbjct: 410 VDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDA 469
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ + L ++ GC ++ +++ V+ A +L KG
Sbjct: 470 LLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKG 529
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ L D L G++ EA + ++ E+G KP VS+ + + + + +
Sbjct: 530 LWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAF 589
Query: 241 NLSNKMALFGPSMIPK 256
L +M+ G + P+
Sbjct: 590 ELLEEMSKRGLKLSPR 605
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 116/246 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD+++Y+ LI KD + KA+K+ ++M+ PD I++T+++ LG G+
Sbjct: 175 MERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGR 234
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A ++L EMKE G P YNA I + L +A L+DEM G P+ TY+
Sbjct: 235 VDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSC 294
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++ L + + +M GC P+T + L+ + + A +L++ M KG
Sbjct: 295 LITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKG 354
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
++ L L ++ A F EM G +P ++ I ++ A + +
Sbjct: 355 CNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDAD 414
Query: 241 NLSNKM 246
L ++M
Sbjct: 415 RLFSEM 420
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 86/193 (44%), Gaps = 35/193 (18%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G+ PD+++YN ++ + + ++A KI E M++ + PDV +Y +++ GL +
Sbjct: 420 MRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKE 479
Query: 61 PDKARDVLKEMKEYGC-----------------------------------YPDAAAYNA 85
D A +LKE+ E GC +P A++YNA
Sbjct: 480 VDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNA 539
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
I A R+ +A ++++ E+G P+ +Y+ + + +++ L M G
Sbjct: 540 LIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRG 599
Query: 146 CLPNTQSCMFLVK 158
+ +S LV+
Sbjct: 600 LKLSPRSYSNLVR 612
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 71/166 (42%), Gaps = 1/166 (0%)
Query: 78 PDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNL 137
P+ YN+ + A + +A L +E+ +P+ +Y+ + ++ +
Sbjct: 7 PNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEV 66
Query: 138 YCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCD 197
M GC PN + LV + + + AL+L +M + G + + L L
Sbjct: 67 VAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGK 126
Query: 198 MGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNL 242
G+L EA F EM E+G P ++ I L ++ Q+A++ L
Sbjct: 127 AGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELL 172
>gi|449446624|ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Cucumis sativus]
Length = 548
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 110/207 (53%), Gaps = 2/207 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD+ S+N LI C+ +++KA++ + M + PD++SY ++I G V + K D+
Sbjct: 212 PDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDL 271
Query: 68 LKE-MKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
LKE M G PD Y + I YC ++ AS L DEMV G+ PN T+N+ F
Sbjct: 272 LKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFG 331
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
++RS+ +Y +M+ GCLP+ + L+ R+ +V L+LW +M + +
Sbjct: 332 KVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVY 391
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIE 213
VL + LC ++ EA ++FL ++
Sbjct: 392 TYAVLINALCKENRIREA-RNFLRHLK 417
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 116/260 (44%), Gaps = 8/260 (3%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV PD+++Y +I YCK ++ A ++ ++M I P+ ++ +I G G VG A
Sbjct: 280 GVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSA 339
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ ++M GC PD + + I YC + L +EM + LSPN TY +
Sbjct: 340 MVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINA 399
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
N +R + N + + +P ++ + KV+ A + +M EK
Sbjct: 400 LCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPD 459
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELAN--------KQ 236
+ +L C G++VEA +F +MIE P +++ + + + A KQ
Sbjct: 460 KITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEASQIKQ 519
Query: 237 EALQNLSNKMALFGPSMIPK 256
ALQ L+ ++ G + K
Sbjct: 520 AALQKLNLGLSSLGSPLTRK 539
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 79/149 (53%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G PD+V++ LID YC++ +V + K+ E+M+ ++SP+V +Y +I L +
Sbjct: 346 MLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENR 405
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR+ L+ +K P YN I +C A ++ +A+ ++ EM EK P+ T+ +
Sbjct: 406 IREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTI 465
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPN 149
+ + + + +M+ C+P+
Sbjct: 466 LIIGNCMKGRMVEAISTFYKMIEINCVPD 494
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 107/251 (42%), Gaps = 5/251 (1%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
+ + +Y+ L+ CK + A + + MR + I PD ++ +G+ D
Sbjct: 102 HLSINHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLD 161
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRD-ASGLMDEMVEKGLSPNATTYNLF 121
A++ L E+ YG YN + N + + L D A L E +E P+ ++N+
Sbjct: 162 SAKNFLNEVHCYGIKVSPFVYNNLL-NMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNIL 220
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKG 180
R ++ ++ + M GC P+ S L+ C+ E + L DM+ KG
Sbjct: 221 IRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKG 280
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEAL 239
++ + C +G + A + F EM+ G KP+ +F I ++ N + A+
Sbjct: 281 VSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAM 340
Query: 240 QNLSNKMALFG 250
+ KM L G
Sbjct: 341 V-MYEKMLLLG 350
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 58/119 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ + P++ +Y LI+ CK+ ++ +A + ++ ++ P Y +I G G+
Sbjct: 381 MKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGK 440
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
D+A ++ EM+E C PD + I C+ R+ +A +M+E P+ T N
Sbjct: 441 VDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITIN 499
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 90/224 (40%), Gaps = 1/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G+ PD L+ Y + +++ A + ++ I Y +++ L
Sbjct: 135 MRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNL 194
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + +E E PD ++N IR C + A M G P+ +YN
Sbjct: 195 VDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNT 254
Query: 121 FFRVFYWSNDLRSSWNLYCR-MMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
F N++ +L M+ G P+ + ++ + ++ A +L+++MV
Sbjct: 255 LINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSS 314
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G +VL D +G + A + +M+ G P V+F
Sbjct: 315 GIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTF 358
>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
Length = 552
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 129/253 (50%), Gaps = 6/253 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + + PD+V+Y LID K R+V++AY + E+ R + P V++Y ++I GL G+
Sbjct: 21 MVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGR 80
Query: 61 PDKARDVLKEMK-EYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ A + +M +G P Y+ I C + L++EM +G +PNA TYN
Sbjct: 81 IENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYN 140
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWND--M 176
+ +++L +M GC P + ++K LCK E +E A ++ ++ M
Sbjct: 141 TLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGE-IEAAFRVVDEMFM 199
Query: 177 VEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANK 235
+E G ++ + + D LC ++++A F +E+G +P+ V++ I L ++A
Sbjct: 200 IESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKM 259
Query: 236 QEALQNLSNKMAL 248
EALQ L+ + L
Sbjct: 260 DEALQLLAKMVEL 272
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 127/256 (49%), Gaps = 4/256 (1%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
G +P +V+Y+ LID C+D +V+K K++E+M +P+ ++Y +++ L G+
Sbjct: 94 HFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSK 153
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDE--MVEKGLSPNATTYNL 120
+A +L++M GC P+ + I+ C + A ++DE M+E GLSP+ T+N
Sbjct: 154 EAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNS 213
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + N++ R + GC PN + L+ + K++ ALQL MVE G
Sbjct: 214 VLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELG 273
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
+ + + D L +G++ +A +M + G P V++ I + +EA+
Sbjct: 274 CRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAV 333
Query: 240 QNLSNKM-ALFGPSMI 254
L + A F PS++
Sbjct: 334 GLLREMLEAGFHPSVV 349
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 120/260 (46%), Gaps = 38/260 (14%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGL----- 55
M E G+ PD++++N ++D CK++++ A+ + ++ + P+V++Y+++I GL
Sbjct: 199 MIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAK 258
Query: 56 ----------------------------GL--VGQPDKARDVLKEMKEYGCYPDAAAYNA 85
GL VG+ + A VL++M++ GC PDA YN
Sbjct: 259 MDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNT 318
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
I + +RLR+A GL+ EM+E G P+ TY S + + M G
Sbjct: 319 LIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARG 378
Query: 146 CLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMV-EKGFGSYILVSDVLFDLLCDMGKLVE 203
C PN + +V LCK E AL + M ++ +++ L D LC GK+ E
Sbjct: 379 CAPNAITYSSIVDGLCKAGRVTE-ALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDE 437
Query: 204 AEKSFLEMIEKGHKPSQVSF 223
A + MI G P V+F
Sbjct: 438 AYEFLERMIRAGRIPDVVTF 457
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 122/240 (50%), Gaps = 2/240 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G PD V+YN LID + K +++ +A ++ +M + P V++YT++ GL G+
Sbjct: 304 MRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGR 363
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMV-EKGLSPNATTYN 119
D+A ++L M GC P+A Y++ + C A R+ +A G ++M ++ ++P+ Y+
Sbjct: 364 FDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYS 423
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ + ++ RM+ G +P+ + L+ +++ L+L+ M E+
Sbjct: 424 ALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAER 483
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEA 238
G ++ L D LC ++ EA F +M G P + + R I L+E+ ++A
Sbjct: 484 GCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNRDEDA 543
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 118/257 (45%), Gaps = 36/257 (14%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E G +P++V+Y+ LID K ++++A +++ KM + + ++Y++++ GL VG+ +
Sbjct: 236 ERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRME 295
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
A VL++M++ GC PDA YN I + +RLR+A GL+ EM+E G P+ TY
Sbjct: 296 DAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLC 355
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCK-------------------- 161
S + + M GC PN + +V LCK
Sbjct: 356 HGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVV 415
Query: 162 ---------------RQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEK 206
+ K++ A + M+ G ++ +L + LCD G++ +
Sbjct: 416 APHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLE 475
Query: 207 SFLEMIEKGHKPSQVSF 223
F M E+G P V++
Sbjct: 476 LFRGMAERGCVPDMVTY 492
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 117/242 (48%), Gaps = 3/242 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMR--DEDISPDVISYTSIIGGLGLV 58
M G P+++++ +I CK+ ++E A+++V++M + +SPDVI++ S++ GL
Sbjct: 162 MAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKE 221
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
+ A +V K E GC P+ Y+ I ++ +A L+ +MVE G N TY
Sbjct: 222 QRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTY 281
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
+ + + + +M GCLP+ + L+ +++++ A+ L +M+E
Sbjct: 282 STVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLE 341
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI-KALMELANKQE 237
GF ++ L LC G+ EA + M +G P+ +++ I L + E
Sbjct: 342 AGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTE 401
Query: 238 AL 239
AL
Sbjct: 402 AL 403
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 51/105 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD+V+++ LI+ C +++ ++ M + PD+++Y +++ L +
Sbjct: 445 MIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASR 504
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDE 105
D+A D+ ++M+ G PD + I R DA + DE
Sbjct: 505 VDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNRDEDAKRIQDE 549
>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 920
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 118/227 (51%), Gaps = 1/227 (0%)
Query: 1 MREMG-VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVG 59
M+E G + D V+Y +I+ YC+ +++ A ++ +MRD I ++ Y ++I GL +G
Sbjct: 314 MKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLG 373
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ ++ + VL+EM++ G PD +YN I YC +R A + MV GL+ TYN
Sbjct: 374 RMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYN 433
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ F + + + L+ M+ G PN SC L+ + K E AL LW + + +
Sbjct: 434 TLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLAR 493
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G ++ + + + LC +G++ EAE+ M E P +++R +
Sbjct: 494 GLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTL 540
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 120/241 (49%), Gaps = 4/241 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDE-DISPDVISYTSIIGGLGLVG 59
++ G+ P++V+Y L+ YCKD ++E+A ++V++M++ DI D ++Y +I G G
Sbjct: 279 LQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRG 338
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ D A V EM++ G + + YN I C R+ + ++ EM + G+ P+ +YN
Sbjct: 339 RMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYN 398
Query: 120 LFFRVFYWSNDLRSSWNLYCRMM-GTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
+ +R ++ + CRMM G T + L+K ++ AL+LW M++
Sbjct: 399 TLIDGYCREGSMRKAFEM-CRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLK 457
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQE 237
+G + L D L GK +A + E + +G + ++F I L ++ E
Sbjct: 458 RGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAE 517
Query: 238 A 238
A
Sbjct: 518 A 518
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 96/204 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV P+ +S + L+D K + E+A + ++ ++ +VI++ ++I GL +G+
Sbjct: 455 MLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGR 514
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++L MKE C PD+ Y YC +L A+ LM++M G +P+ +N
Sbjct: 515 MAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNS 574
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + + +++ M G PN + L+ ++ + A L+ +MV G
Sbjct: 575 FITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNG 634
Query: 181 FGSYILVSDVLFDLLCDMGKLVEA 204
+ + L GK+ EA
Sbjct: 635 MNPNVFICSALMSCFYKEGKVDEA 658
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 115/278 (41%), Gaps = 36/278 (12%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQV---------------------------------- 26
MR GV PD + + YC+D +V
Sbjct: 209 MRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGW 268
Query: 27 -EKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYG-CYPDAAAYN 84
E A +I+E ++ + +SP+V++YT ++ G G+ ++A V+KEMKE G D AY
Sbjct: 269 TEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYG 328
Query: 85 AAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGT 144
I YC R+ DA+ + +EM + G+ N YN + + M
Sbjct: 329 MMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDV 388
Query: 145 GCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEA 204
G P+ S L+ R+ + A ++ MV G + L + L C + + +A
Sbjct: 389 GMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDA 448
Query: 205 EKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNL 242
+ + M+++G P+++S + + A K E NL
Sbjct: 449 LRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNL 486
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 97/218 (44%), Gaps = 6/218 (2%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ ++YN L+ +C ++ A ++ M ++P+ IS ++++ GL G+ ++A
Sbjct: 424 GLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQA 483
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++ KE G + +N I C R+ +A L+D M E P++ TY F
Sbjct: 484 LNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDG 543
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK---LCKRQEKVEIALQLWNDMVEKGF 181
+ L ++ +L +M G P+ + + + K+ KV + ++M +G
Sbjct: 544 YCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVN---DIHSEMSARGL 600
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
++ L C G L EA + EM+ G P+
Sbjct: 601 SPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPN 638
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 106/228 (46%), Gaps = 3/228 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++G +P + S N L++ + A + +MR + PD + + G+
Sbjct: 174 MGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGR 233
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + ++EM+ G + AY+A + YC DA +++ + KGLSPN TY L
Sbjct: 234 VAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTL 293
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTG--CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
+ + + + + M TG + M + C+R +++ A ++ N+M +
Sbjct: 294 LVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRG-RMDDATRVRNEMRD 352
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G + V + + + LC +G++ E +K EM + G +P + S+ +
Sbjct: 353 AGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTL 400
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 87/210 (41%), Gaps = 19/210 (9%)
Query: 11 VSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKE 70
V +N +I CK ++ A + E +R++ PD +Y+S+I G G D+A +
Sbjct: 701 VMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDV 760
Query: 71 MKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSND 130
M G P+ YN+ I C + +L A L +++ KG+SPN TYN +
Sbjct: 761 MLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGK 820
Query: 131 LRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDV 190
++ L +M+ G + E A++L + M+E +
Sbjct: 821 TTEAFKLKQKMVEEGYM-------------------EEAIKLLDQMIENNVDPNYITYCT 861
Query: 191 LFDLLCDMGKLVEAEKSFLEMIEKGHKPSQ 220
L G + E K + EM +G P+
Sbjct: 862 LIHGYIKSGNMEEISKLYDEMHIRGLLPTN 891
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 71/158 (44%), Gaps = 16/158 (10%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD +Y+ LI +++A+ + + M ++P++I+Y S+I GL G+ +A ++
Sbjct: 733 PDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNL 792
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKR----------------LRDASGLMDEMVEKGL 111
+++ G P+ YN I YC + + +A L+D+M+E +
Sbjct: 793 FNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGYMEEAIKLLDQMIENNV 852
Query: 112 SPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPN 149
PN TY + S ++ LY M G LP
Sbjct: 853 DPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPT 890
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 100/228 (43%), Gaps = 23/228 (10%)
Query: 25 QVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYN 84
+++K +V+ + D + + + II GL G+ A+ + + ++ PD Y+
Sbjct: 680 EIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYS 739
Query: 85 AAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGT 144
+ I + + +A L D M+ GL+PN TYN S L + NL+ ++
Sbjct: 740 SLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSK 799
Query: 145 GCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVE 203
G PN + L+ + CK + E A +L MVE+G+ + E
Sbjct: 800 GISPNGITYNTLIDEYCKEGKTTE-AFKLKQKMVEEGY-------------------MEE 839
Query: 204 AEKSFLEMIEKGHKPSQVSF-RRIKALMELANKQEALQNLSNKMALFG 250
A K +MIE P+ +++ I ++ N +E + L ++M + G
Sbjct: 840 AIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEE-ISKLYDEMHIRG 886
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/252 (19%), Positives = 103/252 (40%), Gaps = 26/252 (10%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G P + +N I + +Q K I +M +SP++++Y ++I G G
Sbjct: 560 MEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGN 619
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSP------- 113
+A ++ EM G P+ +A + + ++ +A+ ++ ++V + P
Sbjct: 620 LHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTI 679
Query: 114 ---------------NATTYNLFFRVFYW----SNDLRSSWNLYCRMMGTGCLPNTQSCM 154
N + N+ + V + S + + +L+ + LP+ +
Sbjct: 680 EIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYS 739
Query: 155 FLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEK 214
L+ C ++ A L + M+ G I+ + L LC GKL A F ++ K
Sbjct: 740 SLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSK 799
Query: 215 GHKPSQVSFRRI 226
G P+ +++ +
Sbjct: 800 GISPNGITYNTL 811
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 40/194 (20%), Positives = 78/194 (40%), Gaps = 13/194 (6%)
Query: 43 PDVISYTSIIGGLGLVGQPDKARDVLKEMKEYG---------CYPD----AAAYNAAIRN 89
P ++S+ ++ L + AR +L + + Y D A +++ +R
Sbjct: 98 PSLVSHAQLLHILARARRFHDARALLSSLPPHAEPLFPHLAEVYRDFTFSAVSFDLLLRA 157
Query: 90 YCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPN 149
+ A +L A + D M + G P+ + N S D + +Y +M G LP+
Sbjct: 158 HADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPD 217
Query: 150 TQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFL 209
+ + K R +V A++ +M G ++ + D C MG +A +
Sbjct: 218 EFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILE 277
Query: 210 EMIEKGHKPSQVSF 223
+ KG P+ V++
Sbjct: 278 SLQRKGLSPNVVTY 291
>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g02150
gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 761
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 115/240 (47%), Gaps = 1/240 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G +P + +YN +ID CK+ VE A + E+M+ + PD ++Y S+I G G VG+ D
Sbjct: 257 GARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDT 316
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+EMK+ C PD YNA I +C +L EM GL PN +Y+
Sbjct: 317 VCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDA 376
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
F ++ + Y M G +PN + L+ + + A +L N+M++ G
Sbjct: 377 FCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWN 436
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLS 243
++ L D LCD ++ EAE+ F +M G P+ S+ I ++ N AL+ L+
Sbjct: 437 VVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLN 496
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 115/243 (47%), Gaps = 1/243 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++M +PD+++YN LI+ +CK ++ + +M+ + P+V+SY++++ G
Sbjct: 323 MKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGM 382
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A +M+ G P+ Y + I C L DA L +EM++ G+ N TY
Sbjct: 383 MQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTA 442
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ + L+ +M G +PN S L+ + + ++ AL+L N++ +G
Sbjct: 443 LIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRG 502
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI-KALMELANKQEAL 239
+L+ LC + K+ A+ EM E G K + + + + A + N E L
Sbjct: 503 IKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGL 562
Query: 240 QNL 242
L
Sbjct: 563 HLL 565
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 107/262 (40%), Gaps = 2/262 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ V P S N L+ + K + + + + M P V +Y +I + G
Sbjct: 218 MKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGD 277
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ AR + +EMK G PD YN+ I + RL D +EM + P+ TYN
Sbjct: 278 VEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNA 337
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F L Y M G G PN S LV ++ ++ A++ + DM G
Sbjct: 338 LINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVG 397
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
L D C +G L +A + EM++ G + + V++ + + A + + +
Sbjct: 398 LVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAE 457
Query: 241 NLSNKMALFGPSMIPKREEYLA 262
L KM G +IP Y A
Sbjct: 458 ELFGKMDTAG--VIPNLASYNA 477
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 101/244 (41%), Gaps = 2/244 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P ++ L V +E+A + KM+ + P S ++ +G+ D +
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
K+M G P YN I C + A GL +EM +GL P+ TYN F
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
L + + M C P+ + L+ + K+ I L+ + +M G ++
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 369
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLSNKM 246
L D C G + +A K +++M G P++ ++ I A ++ N +A + L N+M
Sbjct: 370 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFR-LGNEM 428
Query: 247 ALFG 250
G
Sbjct: 429 LQVG 432
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 114/277 (41%), Gaps = 37/277 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV P++ SYN LI + K + +++A +++ +++ I PD++ Y + I GL + +
Sbjct: 463 MDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEK 522
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEK----------- 109
+ A+ V+ EMKE G ++ Y + Y + + L+DEM E
Sbjct: 523 IEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCV 582
Query: 110 -------------------------GLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGT 144
GL NA + N + ++ L+ +M+
Sbjct: 583 LIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQK 642
Query: 145 GCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEA 204
G +P+ + L+ +Q V AL L + M E G +L L L +L +A
Sbjct: 643 GLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKA 702
Query: 205 EKSFLEMIEKGHKPSQV-SFRRIKALMELANKQEALQ 240
EMI +G P +V +K EL EA++
Sbjct: 703 RSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVE 739
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 4/119 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ PD +Y L+D K V +A + +KM + + D+++YTS++ GL Q
Sbjct: 639 MVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQ 698
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNY----CIAKRLRDASGLMDEMVEKGLSPNA 115
KAR L+EM G +PD + ++ + CI + + S LM + + NA
Sbjct: 699 LQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKHQLLTSDNDNA 757
>gi|186495472|ref|NP_177628.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|133778904|gb|ABO38792.1| At1g74900 [Arabidopsis thaliana]
gi|332197524|gb|AEE35645.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 453
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 94/176 (53%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+ P++ +YN ++ + + Q+ A++ +M+ D DV++YT+++ G G+ G+
Sbjct: 221 MVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGE 280
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR+V EM G P A YNA I+ C + +A + +EMV +G PN TTYN+
Sbjct: 281 IKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNV 340
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDM 176
R + + + L RM GC PN Q+ +++ +VE AL L+ M
Sbjct: 341 LIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKM 396
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 115/219 (52%), Gaps = 1/219 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G D+ S+N ++DV CK ++VEKAY++ +R S D ++Y I+ G L+ +
Sbjct: 152 MHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGR-FSVDTVTYNVILNGWCLIKR 210
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA +VLKEM E G P+ YN ++ + A ++R A EM ++ + TY
Sbjct: 211 TPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTT 270
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + +++ + N++ M+ G LP+ + ++++ +++ VE A+ ++ +MV +G
Sbjct: 271 VVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRG 330
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
+ + +VL L G+ E+ M +G +P+
Sbjct: 331 YEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPN 369
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 122/250 (48%), Gaps = 7/250 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR + + P ++ + + Y + +KA K+ M + D+ S+ +I+ L +
Sbjct: 117 MRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKR 176
Query: 61 PDKARDVLKEMKEYGCYP-DAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+KA ++ + ++ G + D YN + +C+ KR A ++ EMVE+G++PN TTYN
Sbjct: 177 VEKAYELFRALR--GRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYN 234
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ F+ + +R +W + M C + + +V +++ A ++++M+ +
Sbjct: 235 TMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIRE 294
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALM---ELANK 235
G + + + +LC + A F EM+ +G++P+ ++ I+ L E +
Sbjct: 295 GVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRG 354
Query: 236 QEALQNLSNK 245
+E +Q + N+
Sbjct: 355 EELMQRMENE 364
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 45/98 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G +P++ +YN LI + + +++++M +E P+ +Y +I +
Sbjct: 326 MVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSE 385
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRD 98
+KA + ++M C P+ YN I + KR D
Sbjct: 386 VEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSED 423
>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
Length = 1244
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 116/219 (52%), Gaps = 2/219 (0%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ P++++Y+ L+D + K+ +V +A ++ E+M I PD+++Y+S+I GL L + D+A
Sbjct: 359 ITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEAN 418
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+ M GC D +YN I +C AKR+ D L EM ++GL N TYN + F
Sbjct: 419 QMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGF 478
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + D+ + + +M G P+ + + L LC E +E AL ++ DM ++
Sbjct: 479 FQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGE-LEKALVIFEDMQKREMDLD 537
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I+ + +C GK+ EA F + KG KP V++
Sbjct: 538 IVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTY 576
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 120/239 (50%), Gaps = 1/239 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E + PD+ +++ LID + K+ ++ +A K+ ++M I P +++Y+S+I G + +
Sbjct: 931 MIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDR 990
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A+ + + M C+PD YN I+ +C KR+ + + EM ++GL N TYN+
Sbjct: 991 LDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNI 1050
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + D + ++ M+ G PN + L+ + K+E A+ ++ +
Sbjct: 1051 LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 1110
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEA 238
I +++ + +C GK+ + F + KG KP V++ I +K+EA
Sbjct: 1111 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEA 1169
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 125/252 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++G +PD V+ L++ +C+ +V A +V+KM + PD+++Y +II L +
Sbjct: 249 MLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKR 308
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A D KE++ G P+ Y A + C + R DA+ L+ +M++K ++PN TY+
Sbjct: 309 VNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSA 368
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + + + L+ M+ P+ + L+ ++++ A Q+++ MV KG
Sbjct: 369 LLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKG 428
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ ++ + L + C ++ + K F EM ++G + V++ + A + Q
Sbjct: 429 CLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQ 488
Query: 241 NLSNKMALFGPS 252
++M FG S
Sbjct: 489 EFFSQMDFFGIS 500
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 105/223 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++G +P+IV+ + L++ YC +++ +A +V++M P+ +++ ++I GL L +
Sbjct: 756 MMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNK 815
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++ M GC PD Y + C A L+++M + L P YN
Sbjct: 816 ASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNT 875
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + NL+ M G PN + L+ + A +L +DM+E+
Sbjct: 876 IIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK 935
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ L D GKLVEAEK + EM+++ PS V++
Sbjct: 936 INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTY 978
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 116/226 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + ++P ++ YN +ID CK + ++ A + ++M + I P+V++Y+S+I L G+
Sbjct: 861 MEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGR 920
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +L +M E PD ++A I + +L +A L DEMV++ + P+ TY+
Sbjct: 921 WSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSS 980
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + L + ++ M+ C P+ + L+K + ++VE ++++ +M ++G
Sbjct: 981 LINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRG 1040
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ ++L L G A++ F EM+ G P+ +++ +
Sbjct: 1041 LVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTL 1086
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 111/218 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E+G KPDIV+YN +ID CK ++V A+ +++ + I P+V++YT+++ GL +
Sbjct: 284 MVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSR 343
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +L +M + P+ Y+A + + ++ +A L +EMV + P+ TY+
Sbjct: 344 WSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSS 403
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + ++ M+ GCL + S L+ + ++VE ++L+ +M ++G
Sbjct: 404 LINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRG 463
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
S + + L G + +A++ F +M G P
Sbjct: 464 LVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISP 501
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 106/219 (48%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G +PD+V+Y +++ CK + A+ ++ KM + P V+ Y +II GL D A
Sbjct: 830 GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDA 889
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++ KEM+ G P+ Y++ I C R DAS L+ +M+E+ ++P+ T++
Sbjct: 890 LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDA 949
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
F L + LY M+ P+ + L+ ++++ A Q++ MV K
Sbjct: 950 FVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 1009
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + L C ++ E + F EM ++G + V++
Sbjct: 1010 VVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTY 1048
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 122/281 (43%), Gaps = 17/281 (6%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G++ D+ ++N +I+ +C QV A I+ KM PD ++ S++ G +
Sbjct: 214 MEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNR 273
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A ++ +M E G PD AYNA I + C KR+ DA E+ KG+ PN TY
Sbjct: 274 VSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTA 333
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
S+ + L M+ PN + L+ + KV A +L+ +MV
Sbjct: 334 LVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMS 393
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF----------RRIKALM 230
I+ L + LC ++ EA + F M+ KG VS+ +R++ M
Sbjct: 394 IDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGM 453
Query: 231 ELANKQEALQNLSNKM-------ALFGPSMIPKREEYLAEM 264
+L + +SN + F + K +E+ ++M
Sbjct: 454 KLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM 494
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 103/217 (47%), Gaps = 2/217 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P I+ ++ L+ K + + + E+M++ I + +Y+ +I Q A V
Sbjct: 693 PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAV 752
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L +M + G P+ ++ + YC +KR+ +A L+D+M G PN T+N +
Sbjct: 753 LGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFL 812
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYIL 186
N + L RM+ GC P+ + +V LCKR + ++A L N M + +L
Sbjct: 813 HNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGD-TDLAFNLLNKMEQGKLEPGVL 871
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + + D LC + +A F EM KG +P+ V++
Sbjct: 872 IYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTY 908
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 84/174 (48%), Gaps = 2/174 (1%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD+V+YN LI +CK ++VE+ ++ +M + + ++Y +I GL G D A+++
Sbjct: 1008 PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEI 1067
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
KEM G P+ YN + C +L A + + + + P TYN+
Sbjct: 1068 FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 1127
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKG 180
+ + W+L+C + G P+ + ++ C++ K E A L+ +M E G
Sbjct: 1128 AGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEE-ADALFKEMKEDG 1180
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 104/224 (46%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ +G+ + +Y+ LI+ +C+ Q+ A ++ KM P++++ +S++ G +
Sbjct: 721 MQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKR 780
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++ +M G P+ +N I + + +A L+D MV KG P+ TY +
Sbjct: 781 ISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGV 840
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
D ++NL +M P ++ LCK + ++ AL L+ +M K
Sbjct: 841 VVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKH-MDDALNLFKEMETK 899
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G ++ L LC+ G+ +A + +MIE+ P +F
Sbjct: 900 GIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTF 943
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 67/141 (47%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV P+I++YN L+D CK+ ++EKA + E ++ + P + +Y +I G+ G+ +
Sbjct: 1075 GVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDG 1134
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
D+ + G PD AYN I +C +A L EM E G PN+ YN R
Sbjct: 1135 WDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRA 1194
Query: 125 FYWSNDLRSSWNLYCRMMGTG 145
D +S L M G
Sbjct: 1195 RLRDGDREASAELIKEMRSCG 1215
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 85/182 (46%), Gaps = 2/182 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G D+VSYN LI+ +CK ++VE K+ +M + + ++Y ++I G G
Sbjct: 424 MVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGD 483
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA++ +M +G PD YN + C L A + ++M ++ + + TY
Sbjct: 484 VDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTT 543
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEK 179
R + + +W+L+C + G P+ + + LC + E+ L+ M ++
Sbjct: 544 VIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVE-ALYTKMKQE 602
Query: 180 GF 181
G
Sbjct: 603 GL 604
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 95/216 (43%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P IV +N L+ K ++ + + +KM I D+ ++ +I Q A +
Sbjct: 186 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 245
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L +M + G PD + + +C R+ DA L+D+MVE G P+ YN
Sbjct: 246 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 305
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ + +++ + + G PN + LV + A +L +DM++K ++
Sbjct: 306 TKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVIT 365
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
L D GK++EA++ F EM+ P V++
Sbjct: 366 YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTY 401
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 98/215 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M M + PDIV+Y+ LI+ C ++++A ++ + M + DV+SY ++I G +
Sbjct: 389 MVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKR 448
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ + +EM + G + YN I+ + A + A +M G+SP+ TYN+
Sbjct: 449 VEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNI 508
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ +L + ++ M + + +++ + KVE A L+ + KG
Sbjct: 509 LLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKG 568
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
I+ + LC G L E E + +M ++G
Sbjct: 569 LKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEG 603
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 113/248 (45%), Gaps = 22/248 (8%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ PDI +YN L+ C + ++EKA I E M+ ++ D+++YT++I G+ G+ ++A
Sbjct: 498 GISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEA 557
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ + G PD Y + C L + L +M ++GL N T +
Sbjct: 558 WSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS----- 612
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK--LCKRQEKVEIALQLWNDMVEKGFG 182
D+ S L +M+ G P S + +K +CK+ AL L G
Sbjct: 613 ---DGDITLSAELIKKMLSCGYAP---SLLKDIKSGVCKK------ALSLLRAF--SGKT 658
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNL 242
SY + + L ++ KL +A F EM++ PS + F ++ + + NK + + +L
Sbjct: 659 SYDYREKLSRNGLSEL-KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISL 717
Query: 243 SNKMALFG 250
+M G
Sbjct: 718 GEQMQNLG 725
>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 927
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 125/245 (51%), Gaps = 2/245 (0%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E G P ++YN ++D + K+ V A +M + +SP+VI+YT++I G D
Sbjct: 586 EKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTD 645
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
A + EM+ G D AAY A I +C + + AS L E+++ GLSPN+ YN
Sbjct: 646 LALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLI 705
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
+ N++ ++ NL RM+G G + Q+ L+ ++ ++ +AL L+++M KG
Sbjct: 706 SGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGII 765
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQN 241
I++ VL + LC G+L A+K EM P+ + I + N QEA +
Sbjct: 766 PDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHFKAGNLQEAFR- 824
Query: 242 LSNKM 246
L N+M
Sbjct: 825 LHNEM 829
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 106/246 (43%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ P VSYN +I +C+ ++ A + M D + P+VI+Y+ ++ G G
Sbjct: 479 MLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGD 538
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A V M + P YN I C R +A ++ + VEKG P TYN
Sbjct: 539 TEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNS 598
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + S+ Y M +G PN + L+ + ++AL++ N+M KG
Sbjct: 599 IMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKG 658
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
I L D C + A F E+++ G P+ V + + + N EA
Sbjct: 659 LELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAAL 718
Query: 241 NLSNKM 246
NL +M
Sbjct: 719 NLQKRM 724
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 107/225 (47%), Gaps = 1/225 (0%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
+ GVK D +Y+ +I +CK+ VE A +++ MRD+ P ++TS+IG G
Sbjct: 271 KSRGVKLDAAAYSIVIQAFCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNM 330
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
+A + EM G + ++ YC +L A D+M E G SPN TY +
Sbjct: 331 VEALRLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVL 390
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
+ ++ +++LY +M P L++ + E E A +L+++ V
Sbjct: 391 IEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDEAVACDI 450
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ I + L LC GK+ EA + +M++KG P++VS+ +
Sbjct: 451 AN-IFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSM 494
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 108/227 (47%), Gaps = 3/227 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G P+ V+Y LI+ CK+ + KAY + +M++++I P V S+I G V
Sbjct: 375 MNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVES 434
Query: 61 PDKARDVLKEMKEYGC-YPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
++A + E C + YN+ + C ++ +A+ L +M++KGL+P +YN
Sbjct: 435 REEASKLFDE--AVACDIANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYN 492
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+L + +++ M+ G PN + L+ + E A +++ MV++
Sbjct: 493 SMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDE 552
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ + LC +G+ EA+ + +EKG P +++ I
Sbjct: 553 NIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSI 599
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 68/117 (58%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ D+ +Y LID K+ ++ A + +M + I PD+I YT +I GL GQ + A
Sbjct: 728 GISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENA 787
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
+ +L EM+ P+ YNA I + A L++A L +EM++KGL+PN TTY++
Sbjct: 788 QKILAEMERDSITPNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDIL 844
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 74/153 (48%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ P+ V YN LI Y +E A + ++M E IS D+ +YT++I GL G+ A
Sbjct: 693 GLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLA 752
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
D+ EM G PD Y I C +L +A ++ EM ++PN YN
Sbjct: 753 LDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAG 812
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV 157
+ + +L+ ++ L+ M+ G PN + L+
Sbjct: 813 HFKAGNLQEAFRLHNEMLDKGLTPNDTTYDILI 845
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 105/239 (43%), Gaps = 2/239 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV+ ++V L+ YCK ++ A + +KM + SP+ ++Y +I G
Sbjct: 340 MVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGN 399
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA D+ +MK P N+ IR + + +AS L DE V ++ N TYN
Sbjct: 400 MAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDEAVACDIA-NIFTYNS 458
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + L+ +M+ G P S ++ RQ +++A +++DM++ G
Sbjct: 459 LLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCG 518
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEA 238
++ +L D G A F M+++ PS ++ +I L ++ EA
Sbjct: 519 LKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEA 577
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 97/215 (45%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
DI YN L++ Y K ++ A ++ + DI P + ++ L +AR+V
Sbjct: 173 DIRIYNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALVKNDMIYEAREVY 232
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
++M G + D + +R +A E +G+ +A Y++ + F +
Sbjct: 233 EKMVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAFCKN 292
Query: 129 NDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVS 188
D+ + L M G +P+ + ++ C +Q + AL+L ++MV G ++V+
Sbjct: 293 LDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVA 352
Query: 189 DVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
L C KLV A + F +M E G P++V++
Sbjct: 353 TTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTY 387
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 106/238 (44%), Gaps = 5/238 (2%)
Query: 6 VKPDIVSY----NCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
V+ DIV + N L+ K+ + +A ++ EKM + + D + ++
Sbjct: 201 VESDIVPWIKFLNFLLTALVKNDMIYEAREVYEKMVLKGVHGDCFTVHIMMRANLKDNNE 260
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
++A+ E K G DAAAY+ I+ +C + A GL+ +M +KG P+ T+
Sbjct: 261 EEAKKFFLEAKSRGVKLDAAAYSIVIQAFCKNLDVELACGLLKDMRDKGWVPSEGTFTSV 320
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
++ + L M+ G N LVK +Q+K+ AL+ ++ M E G
Sbjct: 321 IGACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENGP 380
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQ-VSFRRIKALMELANKQEA 238
+ VL + C G + +A + +M K P+ + I+ +++ +++EA
Sbjct: 381 SPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEA 438
>gi|125542535|gb|EAY88674.1| hypothetical protein OsI_10149 [Oryza sativa Indica Group]
Length = 333
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 125/241 (51%), Gaps = 1/241 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MRE GV PD+ ++ LI YC + +++KA ++ + M ++ + PD+++Y ++I G+ G
Sbjct: 77 MRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGD 136
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA D+ +M +P+ Y+ I ++C ++ DA G +DEM+ KG+ PN TYN
Sbjct: 137 LDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNS 196
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + S ++ +MM P+ + L+ +++K+ A +L N M ++
Sbjct: 197 IIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEK 256
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF-RRIKALMELANKQEAL 239
++ ++L + G + EA F +M KG +P + ++ I + N +EA
Sbjct: 257 VQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAF 316
Query: 240 Q 240
Q
Sbjct: 317 Q 317
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 91/194 (46%)
Query: 33 VEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCI 92
+ +MR + PD + YT +IGG G A V EM GC PD YN + C
Sbjct: 4 LREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCK 63
Query: 93 AKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS 152
+RL DA GL++EM E+G+ P+ T+ + L + L+ M+ P+ +
Sbjct: 64 ERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVT 123
Query: 153 CMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMI 212
L+ RQ ++ A LW+DM + + +L D C+ G++ +A EMI
Sbjct: 124 YNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMI 183
Query: 213 EKGHKPSQVSFRRI 226
KG P+ +++ I
Sbjct: 184 NKGILPNIMTYNSI 197
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 102/226 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G+ PD V Y +I +C+ + A ++ ++M PDV++Y +++ GL +
Sbjct: 7 MRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERR 66
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +L EM+E G PD + I YCI +L A L D M+ + L P+ TYN
Sbjct: 67 LLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNT 126
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
DL + +L+ M PN + L+ + +VE A ++M+ KG
Sbjct: 127 LIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKG 186
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
I+ + + C G + + +K +M+ P +++ +
Sbjct: 187 ILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTL 232
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 75/147 (51%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ P+I++YN +I YC+ V K K ++KM +SPD+I+Y ++I G + A
Sbjct: 186 GILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDA 245
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+L M++ PD YN I + + +++A + ++M KG+ P+ TY
Sbjct: 246 FKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMING 305
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQ 151
+ + + ++ L+ M+ G P+ +
Sbjct: 306 HVTAGNSKEAFQLHDEMLQRGFAPDDK 332
>gi|224077524|ref|XP_002305285.1| predicted protein [Populus trichocarpa]
gi|222848249|gb|EEE85796.1| predicted protein [Populus trichocarpa]
Length = 523
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 107/219 (48%), Gaps = 1/219 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G D+++YN L++ CK V++AYK+ ++ + PD SY I
Sbjct: 243 MRGRGCALDVLAYNSLLEALCKGGNVDEAYKMFREIGSHGVEPDACSYAIFIRAYCEANN 302
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
VL MK Y P+ YN I+ C ++ DA L+ EM+E+G+SP+A +YN
Sbjct: 303 IHSVFSVLDRMKRYDLVPNVFTYNCIIKKLCKNGKVEDAYQLLHEMMERGVSPDAWSYNT 362
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+++ + L M+ CLP+ S L+KL R + + A ++W M E+G
Sbjct: 363 ILAYHCEHSEVNRATKLISIMVKDNCLPDRHSYNMLLKLLVRVGRFDRATEIWESMGERG 422
Query: 181 FGSYILVSDVLFDLLC-DMGKLVEAEKSFLEMIEKGHKP 218
F + V+ LC GKL EA + F MI++G P
Sbjct: 423 FYPSVSTYSVMIHGLCKKKGKLEEACRYFETMIDEGIPP 461
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 99/202 (49%), Gaps = 1/202 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV+PD SY I YC+ + + ++++M+ D+ P+V +Y II L G+ + A
Sbjct: 282 GVEPDACSYAIFIRAYCEANNIHSVFSVLDRMKRYDLVPNVFTYNCIIKKLCKNGKVEDA 341
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+L EM E G PDA +YN + +C + A+ L+ MV+ P+ +YN+ ++
Sbjct: 342 YQLLHEMMERGVSPDAWSYNTILAYHCEHSEVNRATKLISIMVKDNCLPDRHSYNMLLKL 401
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGS 183
+ ++ M G P+ + ++ LCK++ K+E A + + M+++G
Sbjct: 402 LVRVGRFDRATEIWESMGERGFYPSVSTYSVMIHGLCKKKGKLEEACRYFETMIDEGIPP 461
Query: 184 YILVSDVLFDLLCDMGKLVEAE 205
Y ++L + L G L E
Sbjct: 462 YASTIEMLRNRLIGFGLLDHIE 483
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 119/232 (51%), Gaps = 5/232 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G++P + + L+ V CK + V+ A + ++++ + +Y+ ++ G G +G+
Sbjct: 174 MAEFGLRPSVDDLDKLLYVLCKCKHVKCAQQFFDRVKHK-FEAKAKTYSILVRGWGDIGE 232
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR V EM+ GC D AYN+ + C + +A + E+ G+ P+A +Y +
Sbjct: 233 AVEARKVFDEMRGRGCALDVLAYNSLLEALCKGGNVDEAYKMFREIGSHGVEPDACSYAI 292
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPN--TQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
F R + +N++ S +++ RM +PN T +C+ + KLCK KVE A QL ++M+E
Sbjct: 293 FIRAYCEANNIHSVFSVLDRMKRYDLVPNVFTYNCI-IKKLCK-NGKVEDAYQLLHEMME 350
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALM 230
+G + + C+ ++ A K M++ P + S+ + L+
Sbjct: 351 RGVSPDAWSYNTILAYHCEHSEVNRATKLISIMVKDNCLPDRHSYNMLLKLL 402
>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
Length = 1107
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 115/240 (47%), Gaps = 1/240 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G +P + +YN +ID CK+ VE A + E+M+ + PD ++Y S+I G G VG+ D
Sbjct: 125 GARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDT 184
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+EMK+ C PD YNA I +C +L EM GL PN +Y+
Sbjct: 185 VCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDA 244
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
F ++ + Y M G +PN + L+ + + A +L N+M++ G
Sbjct: 245 FCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWN 304
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLS 243
++ L D LCD ++ EAE+ F +M G P+ S+ I ++ N AL+ L+
Sbjct: 305 VVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLN 364
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 115/243 (47%), Gaps = 1/243 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++M +PD+++YN LI+ +CK ++ + +M+ + P+V+SY++++ G
Sbjct: 191 MKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGM 250
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A +M+ G P+ Y + I C L DA L +EM++ G+ N TY
Sbjct: 251 MQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTA 310
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ + L+ +M G +PN S L+ + + ++ AL+L N++ +G
Sbjct: 311 LIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRG 370
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI-KALMELANKQEAL 239
+L+ LC + K+ A+ EM E G K + + + + A + N E L
Sbjct: 371 IKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGL 430
Query: 240 QNL 242
L
Sbjct: 431 HLL 433
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 107/262 (40%), Gaps = 2/262 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ V P S N L+ + K + + + + M P V +Y +I + G
Sbjct: 86 MKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGD 145
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ AR + +EMK G PD YN+ I + RL D +EM + P+ TYN
Sbjct: 146 VEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNA 205
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F L Y M G G PN S LV ++ ++ A++ + DM G
Sbjct: 206 LINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVG 265
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
L D C +G L +A + EM++ G + + V++ + + A + + +
Sbjct: 266 LVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAE 325
Query: 241 NLSNKMALFGPSMIPKREEYLA 262
L KM G +IP Y A
Sbjct: 326 ELFGKMDTAG--VIPNLASYNA 345
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 101/244 (41%), Gaps = 2/244 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P ++ L V +E+A + KM+ + P S ++ +G+ D +
Sbjct: 58 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 117
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
K+M G P YN I C + A GL +EM +GL P+ TYN F
Sbjct: 118 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 177
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
L + + M C P+ + L+ + K+ I L+ + +M G ++
Sbjct: 178 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 237
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLSNKM 246
L D C G + +A K +++M G P++ ++ I A ++ N +A + L N+M
Sbjct: 238 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFR-LGNEM 296
Query: 247 ALFG 250
G
Sbjct: 297 LQVG 300
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 114/277 (41%), Gaps = 37/277 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV P++ SYN LI + K + +++A +++ +++ I PD++ Y + I GL + +
Sbjct: 331 MDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEK 390
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEK----------- 109
+ A+ V+ EMKE G ++ Y + Y + + L+DEM E
Sbjct: 391 IEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCV 450
Query: 110 -------------------------GLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGT 144
GL NA + N + ++ L+ +M+
Sbjct: 451 LIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQK 510
Query: 145 GCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEA 204
G +P+ + L+ +Q V AL L + M E G +L L L +L +A
Sbjct: 511 GLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKA 570
Query: 205 EKSFLEMIEKGHKPSQV-SFRRIKALMELANKQEALQ 240
EMI +G P +V +K EL EA++
Sbjct: 571 RSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVE 607
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 4/119 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ PD +Y L+D K V +A + +KM + + D+++YTS++ GL Q
Sbjct: 507 MVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQ 566
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNY----CIAKRLRDASGLMDEMVEKGLSPNA 115
KAR L+EM G +PD + ++ + CI + + S LM + + NA
Sbjct: 567 LQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKHQLLTSDNDNA 625
>gi|51971677|dbj|BAD44503.1| hypothetical protein [Arabidopsis thaliana]
Length = 447
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 94/176 (53%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+ P++ +YN ++ + + Q+ A++ +M+ D DV++YT+++ G G+ G+
Sbjct: 215 MVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGE 274
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR+V EM G P A YNA I+ C + +A + +EMV +G PN TTYN+
Sbjct: 275 IKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNV 334
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDM 176
R + + + L RM GC PN Q+ +++ +VE AL L+ M
Sbjct: 335 LIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKM 390
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 114/219 (52%), Gaps = 1/219 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G D+ S+N ++DV CK ++VEKAY++ +R S D ++Y I+ G L+ +
Sbjct: 146 MHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGR-FSVDTVTYNVILNGWCLIKR 204
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
K +VLKEM E G P+ YN ++ + A ++R A EM ++ + TY
Sbjct: 205 TPKTLEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTT 264
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + +++ + N++ M+ G LP+ + ++++ +++ VE A+ ++ +MV +G
Sbjct: 265 VVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRG 324
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
+ + +VL L G+ E+ M +G +P+
Sbjct: 325 YEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPN 363
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 121/250 (48%), Gaps = 7/250 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR + + P ++ + + Y + +KA K+ M + D+ S+ +I+ L +
Sbjct: 111 MRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKR 170
Query: 61 PDKARDVLKEMKEYGCYP-DAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+KA ++ + ++ G + D YN + +C+ KR ++ EMVE+G++PN TTYN
Sbjct: 171 VEKAYELFRALR--GRFSVDTVTYNVILNGWCLIKRTPKTLEVLKEMVERGINPNLTTYN 228
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ F+ + +R +W + M C + + +V +++ A ++++M+ +
Sbjct: 229 TMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIRE 288
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALM---ELANK 235
G + + + +LC + A F EM+ +G++P+ ++ I+ L E +
Sbjct: 289 GVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRG 348
Query: 236 QEALQNLSNK 245
+E +Q + N+
Sbjct: 349 EELMQRMENE 358
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 45/98 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G +P++ +YN LI + + +++++M +E P+ +Y +I +
Sbjct: 320 MVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSE 379
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRD 98
+KA + ++M C P+ YN I + KR D
Sbjct: 380 VEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSED 417
>gi|218191356|gb|EEC73783.1| hypothetical protein OsI_08468 [Oryza sativa Indica Group]
Length = 616
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 122/253 (48%), Gaps = 13/253 (5%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMR-----DEDISPDVISYTSIIGGL 55
M E G+ P +YN ++ + + Q+ A+ +M+ DE PDV+SYT+++ GL
Sbjct: 225 MVESGIAPTKTTYNIILKGFFRAGQLRHAWDFFLQMKKRGSKDESCKPDVVSYTTMVHGL 284
Query: 56 GLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNA 115
G+ GQ +KAR V EM + GC P A YNA I+ C + DA + D M+ KG PN
Sbjct: 285 GVAGQLEKARKVFDEMAKEGCAPSVATYNALIQVICKKGNVEDAVTVFDGMLVKGYVPNV 344
Query: 116 TTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWND 175
TY + R + + L RM GC P Q+ L++ + ++E L L+
Sbjct: 345 VTYTVLIRGLCHAGKIDRGLKLLERMKNGGCEPIVQTYNVLIRYLFEEGEMEKGLDLFEK 404
Query: 176 MVEKG------FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKAL 229
M KG +Y ++ +F + +V A + EM+++G+ P + F R+
Sbjct: 405 M-SKGEECLPNQDTYNIIISAMF-MRKRAEDMVLAARMVDEMVDRGYLPRRFMFNRVLNG 462
Query: 230 MELANKQEALQNL 242
+ L QE + L
Sbjct: 463 LMLTGNQELSRKL 475
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 92/192 (47%), Gaps = 6/192 (3%)
Query: 37 RDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRL 96
R ++ D+ + S++ L KA +++ + E PD YN +C K
Sbjct: 157 RSHRVAQDLPLFNSLLDALSKSRHAGKAASLVRAL-EQRFTPDVVTYNTLADGWCRVKDT 215
Query: 97 RDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG-----CLPNTQ 151
A ++ MVE G++P TTYN+ + F+ + LR +W+ + +M G C P+
Sbjct: 216 SRALDVLRLMVESGIAPTKTTYNIILKGFFRAGQLRHAWDFFLQMKKRGSKDESCKPDVV 275
Query: 152 SCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEM 211
S +V ++E A +++++M ++G + + L ++C G + +A F M
Sbjct: 276 SYTTMVHGLGVAGQLEKARKVFDEMAKEGCAPSVATYNALIQVICKKGNVEDAVTVFDGM 335
Query: 212 IEKGHKPSQVSF 223
+ KG+ P+ V++
Sbjct: 336 LVKGYVPNVVTY 347
>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
Length = 939
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 118/227 (51%), Gaps = 1/227 (0%)
Query: 1 MREMG-VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVG 59
M+E G + D V+Y +I+ YC+ +++ A ++ +MRD I ++ Y ++I GL +G
Sbjct: 314 MKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLG 373
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ ++ + VL+EM++ G PD +YN I YC +R A + MV GL+ TYN
Sbjct: 374 RMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYN 433
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ F + + + L+ M+ G PN SC L+ + K E AL LW + + +
Sbjct: 434 TLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLAR 493
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G ++ + + + LC +G++ EAE+ M E P +++R +
Sbjct: 494 GLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTL 540
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 120/241 (49%), Gaps = 4/241 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDE-DISPDVISYTSIIGGLGLVG 59
++ G+ P++V+Y L+ YCKD ++E+A ++V++M++ DI D ++Y +I G G
Sbjct: 279 LQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRG 338
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ D A V EM++ G + + YN I C R+ + ++ EM + G+ P+ +YN
Sbjct: 339 RMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYN 398
Query: 120 LFFRVFYWSNDLRSSWNLYCRMM-GTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
+ +R ++ + CRMM G T + L+K ++ AL+LW M++
Sbjct: 399 TLIDGYCREGSMRKAFEM-CRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLK 457
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQE 237
+G + L D L GK +A + E + +G + ++F I L ++ E
Sbjct: 458 RGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAE 517
Query: 238 A 238
A
Sbjct: 518 A 518
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 96/204 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV P+ +S + L+D K + E+A + ++ ++ +VI++ ++I GL +G+
Sbjct: 455 MLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGR 514
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++L MKE C PD+ Y YC +L A+ LM++M G +P+ +N
Sbjct: 515 MAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNS 574
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + + +++ M G PN + L+ ++ + A L+ +MV G
Sbjct: 575 FITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNG 634
Query: 181 FGSYILVSDVLFDLLCDMGKLVEA 204
+ + L GK+ EA
Sbjct: 635 MNPNVFICSALMSCFYKEGKVDEA 658
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 115/278 (41%), Gaps = 36/278 (12%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQV---------------------------------- 26
MR GV PD + + YC+D +V
Sbjct: 209 MRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGW 268
Query: 27 -EKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYG-CYPDAAAYN 84
E A +I+E ++ + +SP+V++YT ++ G G+ ++A V+KEMKE G D AY
Sbjct: 269 TEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYG 328
Query: 85 AAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGT 144
I YC R+ DA+ + +EM + G+ N YN + + M
Sbjct: 329 MMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDV 388
Query: 145 GCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEA 204
G P+ S L+ R+ + A ++ MV G + L + L C + + +A
Sbjct: 389 GMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDA 448
Query: 205 EKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNL 242
+ + M+++G P+++S + + A K E NL
Sbjct: 449 LRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNL 486
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 92/210 (43%)
Query: 11 VSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKE 70
V +N +I CK ++ A + E +R++ PD +Y+S+I G G D+A +
Sbjct: 701 VMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDV 760
Query: 71 MKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSND 130
M G P+ YN+ I C + +L A L +++ KG+SPN TYN +
Sbjct: 761 MLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGK 820
Query: 131 LRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDV 190
++ L +M+ G P + L+ Q +E A++L + M+E +
Sbjct: 821 TTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCT 880
Query: 191 LFDLLCDMGKLVEAEKSFLEMIEKGHKPSQ 220
L G + E K + EM +G P+
Sbjct: 881 LIHGYIKSGNMEEISKLYDEMHIRGLLPTN 910
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 73/149 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ P+I++YN LI CK ++ +A + K++ + ISP+ I+Y ++I G+
Sbjct: 761 MLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGK 820
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + ++M E G P Y+ I C + +A L+D+M+E + PN TY
Sbjct: 821 TTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCT 880
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPN 149
+ S ++ LY M G LP
Sbjct: 881 LIHGYIKSGNMEEISKLYDEMHIRGLLPT 909
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 106/228 (46%), Gaps = 4/228 (1%)
Query: 25 QVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYN 84
+++K +V+ + D + + + II GL G+ A+ + + ++ PD Y+
Sbjct: 680 EIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYS 739
Query: 85 AAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGT 144
+ I + + +A L D M+ GL+PN TYN S L + NL+ ++
Sbjct: 740 SLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSK 799
Query: 145 GCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVE 203
G PN + L+ + CK + E A +L MVE+G ++ +L LC G + E
Sbjct: 800 GISPNGITYNTLIDEYCKEGKTTE-AFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEE 858
Query: 204 AEKSFLEMIEKGHKPSQVSF-RRIKALMELANKQEALQNLSNKMALFG 250
A K +MIE P+ +++ I ++ N +E + L ++M + G
Sbjct: 859 AIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEE-ISKLYDEMHIRG 905
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 97/218 (44%), Gaps = 6/218 (2%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ ++YN L+ +C ++ A ++ M ++P+ IS ++++ GL G+ ++A
Sbjct: 424 GLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQA 483
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++ KE G + +N I C R+ +A L+D M E P++ TY F
Sbjct: 484 LNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDG 543
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK---LCKRQEKVEIALQLWNDMVEKGF 181
+ L ++ +L +M G P+ + + + K+ KV + ++M +G
Sbjct: 544 YCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVN---DIHSEMSARGL 600
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
++ L C G L EA + EM+ G P+
Sbjct: 601 SPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPN 638
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 106/228 (46%), Gaps = 3/228 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++G +P + S N L++ + A + +MR + PD + + G+
Sbjct: 174 MGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGR 233
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + ++EM+ G + AY+A + YC DA +++ + KGLSPN TY L
Sbjct: 234 VAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTL 293
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTG--CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
+ + + + + M TG + M + C+R +++ A ++ N+M +
Sbjct: 294 LVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRG-RMDDATRVRNEMRD 352
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G + V + + + LC +G++ E +K EM + G +P + S+ +
Sbjct: 353 AGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTL 400
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 83/174 (47%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD +Y+ LI +++A+ + + M ++P++I+Y S+I GL G+ +A ++
Sbjct: 733 PDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNL 792
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
+++ G P+ YN I YC + +A L +MVE+G+ P TY++
Sbjct: 793 FNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCT 852
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
+ + L +M+ PN + L+ + +E +L+++M +G
Sbjct: 853 QGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGL 906
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/252 (19%), Positives = 103/252 (40%), Gaps = 26/252 (10%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G P + +N I + +Q K I +M +SP++++Y ++I G G
Sbjct: 560 MEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGN 619
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSP------- 113
+A ++ EM G P+ +A + + ++ +A+ ++ ++V + P
Sbjct: 620 LHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTI 679
Query: 114 ---------------NATTYNLFFRVFYW----SNDLRSSWNLYCRMMGTGCLPNTQSCM 154
N + N+ + V + S + + +L+ + LP+ +
Sbjct: 680 EIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYS 739
Query: 155 FLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEK 214
L+ C ++ A L + M+ G I+ + L LC GKL A F ++ K
Sbjct: 740 SLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSK 799
Query: 215 GHKPSQVSFRRI 226
G P+ +++ +
Sbjct: 800 GISPNGITYNTL 811
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 43/221 (19%), Positives = 84/221 (38%), Gaps = 30/221 (13%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
+P +VS+ L+ + + R+ A ++ + P A
Sbjct: 97 RPSLVSHAQLLHILARARRFHDARALLSSL------------------------PPHAEP 132
Query: 67 VLKEMKEYGCYPD----AAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
+ + E Y D A +++ +R + A +L A + D M + G P+ + N
Sbjct: 133 LFPHLAE--VYRDFTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLL 190
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
S D + +Y +M G LP+ + + K R +V A++ +M G
Sbjct: 191 NKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLE 250
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + D C MG +A + + KG P+ V++
Sbjct: 251 VNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTY 291
>gi|225450630|ref|XP_002278172.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial [Vitis vinifera]
gi|296089757|emb|CBI39576.3| unnamed protein product [Vitis vinifera]
Length = 586
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 113/229 (49%), Gaps = 1/229 (0%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
++ G+ P++ + N L+ CK ++ A +++E+M P+V++YT+I+GG G
Sbjct: 233 KKFGIVPNVFTCNILVKALCKKNDIDAAIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDM 292
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
AR V E+ + G PD Y + YC R DA +MDEM E + PN TY +
Sbjct: 293 VGARRVFGEILDRGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVI 352
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
+ NL M+ +P++ C ++ + + KVE+A +LW +++K
Sbjct: 353 IEAYCKEKKSGEVLNLLDDMLEKKYIPSSALCCRVIDMLCEEGKVEVACELWKKLLKKNC 412
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALM 230
++ L LC GK+ EA K F E EKG PS +++ + A M
Sbjct: 413 TPDNAITSTLIHWLCKEGKVWEARKLFDEF-EKGSIPSTLTYNALIAGM 460
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 112/241 (46%), Gaps = 2/241 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M MG P++V+Y ++ Y + A ++ ++ D PD +YT ++ G G+
Sbjct: 267 MPAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGEILDRGWVPDPTTYTILMDGYCKKGR 326
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A V+ EM+E P+ Y I YC K+ + L+D+M+EK P++
Sbjct: 327 FMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYIPSSALCCR 386
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + L+ +++ C P+ L+ ++ KV A +L+ D EKG
Sbjct: 387 VIDMLCEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLCKEGKVWEARKLF-DEFEKG 445
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
L + L +C+ G+L EA + + M+EKG P+ ++ IK ++ N +E +
Sbjct: 446 SIPSTLTYNALIAGMCEGGELPEAARLWDNMVEKGCVPNAFTYNMLIKGFCKVGNAREGI 505
Query: 240 Q 240
+
Sbjct: 506 R 506
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 72/137 (52%), Gaps = 1/137 (0%)
Query: 16 LIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYG 75
+ID+ C++ +VE A ++ +K+ ++ +PD +++I L G+ +AR + E E G
Sbjct: 387 VIDMLCEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLCKEGKVWEARKLFDEF-EKG 445
Query: 76 CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSW 135
P YNA I C L +A+ L D MVEKG PNA TYN+ + F + R
Sbjct: 446 SIPSTLTYNALIAGMCEGGELPEAARLWDNMVEKGCVPNAFTYNMLIKGFCKVGNAREGI 505
Query: 136 NLYCRMMGTGCLPNTQS 152
+ M+ GCLPN +
Sbjct: 506 RVMEEMLDNGCLPNKAT 522
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 1/113 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD + LI CK+ +V +A K+ ++ I P ++Y ++I G+ G+ +A +
Sbjct: 414 PDNAITSTLIHWLCKEGKVWEARKLFDEFEKGSI-PSTLTYNALIAGMCEGGELPEAARL 472
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
M E GC P+A YN I+ +C R+ +M+EM++ G PN TY +
Sbjct: 473 WDNMVEKGCVPNAFTYNMLIKGFCKVGNAREGIRVMEEMLDNGCLPNKATYAI 525
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 43/81 (53%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E G P ++YN LI C+ ++ +A ++ + M ++ P+ +Y +I G VG
Sbjct: 443 EKGSIPSTLTYNALIAGMCEGGELPEAARLWDNMVEKGCVPNAFTYNMLIKGFCKVGNAR 502
Query: 63 KARDVLKEMKEYGCYPDAAAY 83
+ V++EM + GC P+ A Y
Sbjct: 503 EGIRVMEEMLDNGCLPNKATY 523
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 35/181 (19%), Positives = 76/181 (41%), Gaps = 1/181 (0%)
Query: 41 ISPDVISYTSIIGGLGLVGQPDKARDVLKE-MKEYGCYPDAAAYNAAIRNYCIAKRLRDA 99
+ P V S+ +++ L + D + K K++G P+ N ++ C + A
Sbjct: 201 LQPSVRSFNTLLNTLVQNKRFDLVHLMFKNCRKKFGIVPNVFTCNILVKALCKKNDIDAA 260
Query: 100 SGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKL 159
+++EM G PN TY + D+ + ++ ++ G +P+ + L+
Sbjct: 261 IRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGEILDRGWVPDPTTYTILMDG 320
Query: 160 CKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
++ + A+++ ++M E + V+ + C K E +M+EK + PS
Sbjct: 321 YCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYIPS 380
Query: 220 Q 220
Sbjct: 381 S 381
>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62680, mitochondrial; Flags: Precursor
gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 116/219 (52%), Gaps = 2/219 (0%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ P++++Y+ L+D + K+ +V +A ++ E+M I PD+++Y+S+I GL L + D+A
Sbjct: 256 ITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEAN 315
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+ M GC D +YN I +C AKR+ D L EM ++GL N TYN + F
Sbjct: 316 QMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGF 375
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + D+ + + +M G P+ + + L LC E +E AL ++ DM ++
Sbjct: 376 FQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGE-LEKALVIFEDMQKREMDLD 434
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I+ + +C GK+ EA F + KG KP V++
Sbjct: 435 IVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTY 473
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 125/252 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++G +PD V+ L++ +C+ +V A +V+KM + PD+++Y +II L +
Sbjct: 146 MLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKR 205
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A D KE++ G P+ Y A + C + R DA+ L+ +M++K ++PN TY+
Sbjct: 206 VNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSA 265
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + + + L+ M+ P+ + L+ ++++ A Q+++ MV KG
Sbjct: 266 LLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKG 325
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ ++ + L + C ++ + K F EM ++G + V++ + A + Q
Sbjct: 326 CLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQ 385
Query: 241 NLSNKMALFGPS 252
++M FG S
Sbjct: 386 EFFSQMDFFGIS 397
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 111/218 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E+G KPDIV+YN +ID CK ++V A+ +++ + I P+V++YT+++ GL +
Sbjct: 181 MVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSR 240
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +L +M + P+ Y+A + + ++ +A L +EMV + P+ TY+
Sbjct: 241 WSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSS 300
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + ++ M+ GCL + S L+ + ++VE ++L+ +M ++G
Sbjct: 301 LINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRG 360
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
S + + L G + +A++ F +M G P
Sbjct: 361 LVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISP 398
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 122/281 (43%), Gaps = 17/281 (6%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G++ D+ ++N +I+ +C QV A I+ KM PD ++ S++ G +
Sbjct: 111 MEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNR 170
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A ++ +M E G PD AYNA I + C KR+ DA E+ KG+ PN TY
Sbjct: 171 VSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTA 230
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
S+ + L M+ PN + L+ + KV A +L+ +MV
Sbjct: 231 LVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMS 290
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF----------RRIKALM 230
I+ L + LC ++ EA + F M+ KG VS+ +R++ M
Sbjct: 291 IDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGM 350
Query: 231 ELANKQEALQNLSNKM-------ALFGPSMIPKREEYLAEM 264
+L + +SN + F + K +E+ ++M
Sbjct: 351 KLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM 391
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 85/182 (46%), Gaps = 2/182 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G D+VSYN LI+ +CK ++VE K+ +M + + ++Y ++I G G
Sbjct: 321 MVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGD 380
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA++ +M +G PD YN + C L A + ++M ++ + + TY
Sbjct: 381 VDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTT 440
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEK 179
R + + +W+L+C + G P+ + + LC + E+ L+ M ++
Sbjct: 441 VIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVE-ALYTKMKQE 499
Query: 180 GF 181
G
Sbjct: 500 GL 501
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 95/216 (43%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P IV +N L+ K ++ + + +KM I D+ ++ +I Q A +
Sbjct: 83 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L +M + G PD + + +C R+ DA L+D+MVE G P+ YN
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 202
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ + +++ + + G PN + LV + A +L +DM++K ++
Sbjct: 203 TKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVIT 262
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
L D GK++EA++ F EM+ P V++
Sbjct: 263 YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTY 298
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 98/215 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M M + PDIV+Y+ LI+ C ++++A ++ + M + DV+SY ++I G +
Sbjct: 286 MVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKR 345
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ + +EM + G + YN I+ + A + A +M G+SP+ TYN+
Sbjct: 346 VEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNI 405
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ +L + ++ M + + +++ + KVE A L+ + KG
Sbjct: 406 LLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKG 465
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
I+ + LC G L E E + +M ++G
Sbjct: 466 LKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEG 500
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 70/149 (46%), Gaps = 8/149 (5%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ PDI +YN L+ C + ++EKA I E M+ ++ D+++YT++I G+ G+
Sbjct: 391 MDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGK 450
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A + + G PD Y + C L + L +M ++GL N T +
Sbjct: 451 VEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS- 509
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPN 149
D+ S L +M+ G P+
Sbjct: 510 -------DGDITLSAELIKKMLSCGYAPS 531
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 69/149 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ + V+YN LI + + V+KA + +M ISPD+ +Y ++GGL G+
Sbjct: 356 MSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGE 415
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA + ++M++ D Y IR C ++ +A L + KGL P+ TY
Sbjct: 416 LEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTT 475
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPN 149
L LY +M G + N
Sbjct: 476 MMSGLCTKGLLHEVEALYTKMKQEGLMKN 504
>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05670, mitochondrial-like [Cucumis sativus]
Length = 748
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 113/216 (52%), Gaps = 2/216 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G++ ++ YN +++ CK +E+A K++++M I PD I+YT++I +G
Sbjct: 494 MRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGD 553
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA +L+EM + G P +N + +C+ L D L+ M+EKG+ P+A TYN
Sbjct: 554 IDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNT 613
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ N + ++ +Y RM G P++ + L+K + ++ A L+ +M+EKG
Sbjct: 614 LMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKG 673
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGH 216
+ + + L K EA + F EM +GH
Sbjct: 674 YVPTVTSYNALIKRFYKKRKFXEARELFEEM--RGH 707
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 102/217 (47%), Gaps = 38/217 (17%)
Query: 1 MREM---GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGL 57
M+EM G+ PD ++Y +ID YC+ ++KA+K++++M D + P V+++ ++ G +
Sbjct: 526 MKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCM 585
Query: 58 VGQ-----------------PD------------------KARDVLKEMKEYGCYPDAAA 82
+G PD + K M+ G PD+
Sbjct: 586 LGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNT 645
Query: 83 YNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMM 142
YN I+ +C A+ L++A L EM+EKG P T+YN + FY + L+ M
Sbjct: 646 YNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMR 705
Query: 143 GTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
G G + + + F V +C + VEI L L ++ +EK
Sbjct: 706 GHGLVADGEIYNFFVDMCYEEGDVEITLNLCDEAIEK 742
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 106/209 (50%), Gaps = 2/209 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD+VSY+ +ID YC +++KA K+++ M+ + + P+ +Y SII L +G+ +A V
Sbjct: 291 PDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKV 350
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L+EM PD Y I + +R A+ DEM+ K +SP+ TY + F
Sbjct: 351 LREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQ 410
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKL-CKRQEKVEIALQLWNDMVEKGFGSYIL 186
+ NL+ M+ G P+ + L+ + CK E V A L N+MV+ G I+
Sbjct: 411 GGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVN-AFSLHNEMVQMGMTPNIV 469
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
L D LC G+L A + EM +KG
Sbjct: 470 TYGALIDGLCKHGELDTANELLDEMRKKG 498
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 114/244 (46%), Gaps = 42/244 (17%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+KPD V+Y LIDVYCK ++ A+ + +M ++P++++Y ++I GL G+
Sbjct: 424 MISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGE 483
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A ++L EM++ G + YN+ + C A + A LM EM G+ P+A TY
Sbjct: 484 LDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYT- 542
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + YCR+ ++ A +L +M+++G
Sbjct: 543 ------------TVIDAYCRL----------------------GDIDKAHKLLQEMLDRG 568
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
++ +VL + C +G L + ++ M+EKG P +++ + KQ ++
Sbjct: 569 LQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLM-------KQHCIR 621
Query: 241 NLSN 244
N N
Sbjct: 622 NSMN 625
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 113/227 (49%), Gaps = 2/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G+KP+ +YN +I + CK + +A K++ +M + I PD + YT++I G +G
Sbjct: 319 MQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGH 378
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A EM PD Y I+ + ++ + L EM+ +GL P+ TY
Sbjct: 379 VRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTT 438
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
V+ + ++ ++++L+ M+ G PN + L+ LCK E ++ A +L ++M +K
Sbjct: 439 LIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGE-LDTANELLDEMRKK 497
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G + + + + + +C G + +A K EM G P +++ +
Sbjct: 498 GLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTV 544
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 111/221 (50%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E G+ + SYN +I C+ +V++A++++ +M +PDV+SY+++I G +G+
Sbjct: 251 EYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELK 310
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
KA ++ +M+ G P+ YN+ I C + +A ++ EM+ + + P+ Y
Sbjct: 311 KALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLI 370
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
F+ +R++ + M+ P+ + L++ + KV L+++M+ +G
Sbjct: 371 HGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLK 430
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ L D+ C G++V A EM++ G P+ V++
Sbjct: 431 PDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTY 471
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 95/222 (42%), Gaps = 2/222 (0%)
Query: 41 ISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDAS 100
IS + SY II L +G+ +A +L +M PD +Y+ I YC L+ A
Sbjct: 254 ISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKAL 313
Query: 101 GLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLC 160
LMD+M KGL PN TYN + + + MM +P+ L+
Sbjct: 314 KLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGF 373
Query: 161 KRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQ 220
+ V A + +++M+ K + L GK++E + F EMI +G KP +
Sbjct: 374 FKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDE 433
Query: 221 VSFRRIKALMELANKQEALQNLSNKMALFGPSMIPKREEYLA 262
V++ + + A + +L N+M G M P Y A
Sbjct: 434 VTYTTLIDVYCKAGEMVNAFSLHNEMVQMG--MTPNIVTYGA 473
>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 119/221 (53%), Gaps = 2/221 (0%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E+ KP++++YN ++D CK + ++A ++ E+M+ + + P +ISY S+I G G+ +
Sbjct: 208 EINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWE 267
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
+++ +L EM + G PD +N I C ++ +A L+ M+E G+ P+ TYN
Sbjct: 268 ESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLI 327
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
F DL S+ L+ M GC P+ S L+ + KVE A++L+N+M+ G
Sbjct: 328 EGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKR 387
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ D L + GK+ +A+K F M K H ++ S+
Sbjct: 388 PNVITYDSLLKGIFLAGKVDDAKKLFSVM--KAHGIAENSY 426
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 131/257 (50%), Gaps = 8/257 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDIS-------PDVISYTSIIG 53
M+++G PD+V+Y LI C + A K+ ++M + DIS P+VI+Y I+
Sbjct: 165 MQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLN-DISRYEINCKPNVITYNIIVD 223
Query: 54 GLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSP 113
GL VG+ D+A+ + +EMK G P +YN+ I +C A + ++ L+DEM+++GL P
Sbjct: 224 GLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQP 283
Query: 114 NATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLW 173
+ T+N+ + + L M+ +G +P+ + L++ + A +L+
Sbjct: 284 DMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELF 343
Query: 174 NDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELA 233
M KG ++ +VL + K+ EA K + EM+ G +P+ +++ + + LA
Sbjct: 344 VSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLA 403
Query: 234 NKQEALQNLSNKMALFG 250
K + + L + M G
Sbjct: 404 GKVDDAKKLFSVMKAHG 420
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 119/259 (45%), Gaps = 37/259 (14%)
Query: 1 MREMGVKPDIVSY-----------------------------------NCLIDVYCKDRQ 25
M+ G+ P I+SY N LID CK+ +
Sbjct: 241 MKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGK 300
Query: 26 VEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNA 85
V +A K++ M + I PD+++Y S+I G +VG + AR++ M GC PD +YN
Sbjct: 301 VIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNV 360
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
I Y ++ +A L +EM+ G PN TY+ + + + + + L+ M G
Sbjct: 361 LINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHG 420
Query: 146 CLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEA 204
N+ + +FL LCK E A++L+ ++ F I + L D LC GKL A
Sbjct: 421 IAENSYTYGIFLDGLCKNDCLFE-AMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETA 479
Query: 205 EKSFLEMIEKGHKPSQVSF 223
+ F ++ +GH+P+ V++
Sbjct: 480 WELFEKLSNEGHEPNVVTY 498
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 105/232 (45%), Gaps = 6/232 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G+ D + N L++ C ++ + + + SP++++Y ++I GL + +
Sbjct: 95 MRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHR 154
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMV------EKGLSPN 114
+A + M++ GC PD Y I+ C + A L EM+ E PN
Sbjct: 155 ISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPN 214
Query: 115 ATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWN 174
TYN+ + L+ M G +P+ S L+ K E + +L +
Sbjct: 215 VITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLD 274
Query: 175 DMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+M+++G ++ +VL D LC GK++EA+K MIE G P V++ +
Sbjct: 275 EMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSL 326
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 70/117 (59%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
++ K +I + NCLID CK ++E A+++ EK+ +E P+V++YT +I G GQ
Sbjct: 451 LKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQ 510
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
DKA ++++M+ GC PD YN +R + + +L + L+ M +K +SP+A T
Sbjct: 511 VDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAIT 567
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 114/247 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+ PD+V+YN LI+ +C + A ++ M + PDVISY +I G +
Sbjct: 311 MIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLK 370
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A + EM G P+ Y++ ++ +A ++ DA L M G++ N+ TY +
Sbjct: 371 VEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGI 430
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F ++ L + L+ + + ++ L+ + K+E A +L+ + +G
Sbjct: 431 FLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEG 490
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
++ ++ C G++ +A +M G P +++ + +NK E +
Sbjct: 491 HEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVV 550
Query: 241 NLSNKMA 247
L ++MA
Sbjct: 551 QLLHRMA 557
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 97/230 (42%), Gaps = 35/230 (15%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G +PD++SYN LI+ Y K +VE+A K+ +M P+VI+Y S++ G+ L G+
Sbjct: 346 MPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGK 405
Query: 61 PDKARDVLKEMKEYGCYPDAAAY-----------------------------------NA 85
D A+ + MK +G ++ Y N
Sbjct: 406 VDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNC 465
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
I C A +L A L +++ +G PN TY + F + + L +M G
Sbjct: 466 LIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANG 525
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLL 195
C P+ + L++ K+E +QL + M +K + ++ D+L
Sbjct: 526 CTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDML 575
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 100/235 (42%), Gaps = 8/235 (3%)
Query: 20 YCKDRQVE--KAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCY 77
+CK V A M +P + S+ ++ GL + + + +M+ G
Sbjct: 42 HCKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLS 101
Query: 78 PDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNL 137
D N + C RLR+ ++ +G SPN TYN + + + + L
Sbjct: 102 SDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRL 161
Query: 138 YCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV------EKGFGSYILVSDVL 191
+ RM GC P+ + L+K + IAL+L +M+ E ++ +++
Sbjct: 162 FLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNII 221
Query: 192 FDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKM 246
D LC +G+ EA++ F EM +G PS +S+ + A K E + L ++M
Sbjct: 222 VDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEM 276
>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Glycine max]
Length = 725
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 123/241 (51%), Gaps = 2/241 (0%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
+P++++Y LI+ +CK ++E+A +IV M + +S + + Y +I L G ++A
Sbjct: 409 EPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQ 468
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
+ EM GC PD +N+ I C ++ +A L +M +G+ N TYN F
Sbjct: 469 LFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFL 528
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+ ++ ++ L M+ GC + + L+K + VE L L+ +M+ KG I+
Sbjct: 529 MRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTII 588
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLSNK 245
++L LC GK+ +A K +MI +G P V++ I L ++ + QEA NL NK
Sbjct: 589 SCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEA-SNLFNK 647
Query: 246 M 246
+
Sbjct: 648 L 648
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 109/226 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ + V YNCLI CKD +E+A ++ +M + PD+ ++ S+I GL +
Sbjct: 438 MSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHK 497
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A + +M G + YN + + + ++ A L+DEM+ +G + TYN
Sbjct: 498 MEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNG 557
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + L+ M+G G P SC L+ R KV AL+ DM+ +G
Sbjct: 558 LIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRG 617
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
I+ + L + LC MG + EA F ++ +G +P +++ +
Sbjct: 618 LTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTL 663
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 119/251 (47%), Gaps = 5/251 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M M +PD+ ++N +I C+ ++ +A K++++M S D ++Y ++ GL +GQ
Sbjct: 266 MFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQ 325
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLM-DEMVEKGLSPNATTYN 119
D+AR +L ++ P+ YN I Y + R +A L+ + MV G P+A T+N
Sbjct: 326 VDEARALLNKIPN----PNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFN 381
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ L S+ L M+ PN + L+ +Q ++E A ++ N M K
Sbjct: 382 IMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAK 441
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
G + + L LC G + EA + F EM KG KP +F + + +K E
Sbjct: 442 GLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEA 501
Query: 240 QNLSNKMALFG 250
+L + M L G
Sbjct: 502 LSLYHDMFLEG 512
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 113/273 (41%), Gaps = 33/273 (12%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV P + ++ ++ C +V+ A ++ M P+ + Y ++I L +
Sbjct: 196 MLSRGVSPTVYTFGVVMKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNR 255
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLS-------- 112
+A +L++M C PD +N I C A R+ +A+ L+D M+ +G S
Sbjct: 256 VSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGY 315
Query: 113 -----------------------PNATTYNLFFRVFYWSNDLRSSWN-LYCRMMGTGCLP 148
PN YN + S + + LY M+ G P
Sbjct: 316 LMHGLCRMGQVDEARALLNKIPNPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEP 375
Query: 149 NTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSF 208
+ + ++ ++ + AL+L N+MV K F ++ +L + C G+L EA +
Sbjct: 376 DAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIV 435
Query: 209 LEMIEKGHKPSQVSFR-RIKALMELANKQEALQ 240
M KG + V + I AL + N +EALQ
Sbjct: 436 NSMSAKGLSLNTVGYNCLICALCKDGNIEEALQ 468
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 63/117 (53%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ P I+S N LI C+ +V A K ++ M ++PD+++Y S+I GL +G +A
Sbjct: 582 GIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEA 641
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
++ +++ G PDA YN I +C DA L+ + V+ G PN T+++
Sbjct: 642 SNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPNEVTWSIL 698
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 86/194 (44%), Gaps = 1/194 (0%)
Query: 31 KIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEM-KEYGCYPDAAAYNAAIRN 89
K++++M+DE + + I+ G G P +A +L +M Y C P +YN +
Sbjct: 120 KLLKQMKDEGLLFKESLFILIMKHYGKAGLPGQATRLLLDMWGVYSCDPTFKSYNVVLDI 179
Query: 90 YCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPN 149
R A + +M+ +G+SP T+ + + +++ S+ +L M GC+PN
Sbjct: 180 LVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSACSLLRDMAKHGCVPN 239
Query: 150 TQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFL 209
+ L+ +V ALQL DM + + + LC G++ EA K
Sbjct: 240 SVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLD 299
Query: 210 EMIEKGHKPSQVSF 223
M+ +G +++
Sbjct: 300 RMLLRGFSTDALTY 313
>gi|414887392|tpg|DAA63406.1| TPA: hypothetical protein ZEAMMB73_124662 [Zea mays]
Length = 795
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 122/244 (50%), Gaps = 2/244 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P +V+YN LI Y KD +E+A ++ ++M + PDV++YT++I GL VG+
Sbjct: 316 MENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYTTLISGLDRVGK 375
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A EM GC P+ YNA I+ + + + + + D++ G P+ T+N
Sbjct: 376 IDAALATYSEMVRNGCSPNLCTYNALIKLHGVRGKFTEMMAVFDDLRSAGYVPDVVTWNT 435
Query: 121 FFRVFYWSNDLRSSWN-LYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
VF N L S + ++ M G +P + + L+ R + A++++ M+E
Sbjct: 436 LLSVF-GQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEA 494
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
G I + + L G+ +AEK F EM+++ KP ++S+ + A K + +
Sbjct: 495 GIYPDISTYNAVLSALARGGRWEQAEKLFAEMVDRDCKPDELSYSSLLHAYANAKKLDKM 554
Query: 240 QNLS 243
+ LS
Sbjct: 555 KTLS 558
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 119/267 (44%), Gaps = 3/267 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCK-DRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVG 59
M + GV+P +V+YN + Y K ++ +V+ M+++ I D +Y ++I G
Sbjct: 210 MVDGGVQPALVTYNVVFHAYSKMSVPWKEVVALVDSMKEDGIERDRYTYNTLISCCRRRG 269
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+A V EMK G PD +N+ + Y A++ +A G++ M G +P+ TYN
Sbjct: 270 LHREAAQVFDEMKAAGFEPDKVTFNSLLDVYGKARKHEEAIGVLKRMENAGCTPSVVTYN 329
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ L + L M G P+ + L+ R K++ AL +++MV
Sbjct: 330 SLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYTTLISGLDRVGKIDAALATYSEMVRN 389
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
G + + L L GK E F ++ G+ P V++ + ++ +
Sbjct: 390 GCSPNLCTYNALIKLHGVRGKFTEMMAVFDDLRSAGYVPDVVTWNTLLSVFGQNGLDSEV 449
Query: 240 QNLSNKMALFGPSMIPKREEYLAEMSA 266
+ +M G IP+R+ Y++ +S+
Sbjct: 450 SGVFKEMKKAG--YIPERDTYVSLISS 474
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 106/250 (42%), Gaps = 11/250 (4%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E PD +Y L+ + + + A + ++M D + P +++Y + + P
Sbjct: 177 EAAPAPDASAYTALVSAFSRAGRFRDAVAVFQRMVDGGVQPALVTYNVVFHAYSKMSVPW 236
Query: 63 K-ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKR--LRDASGLMDEMVEKGLSPNATTYN 119
K ++ MKE G D YN I C +R R+A+ + DEM G P+ T+N
Sbjct: 237 KEVVALVDSMKEDGIERDRYTYNTLIS--CCRRRGLHREAAQVFDEMKAAGFEPDKVTFN 294
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
V+ + + + RM GC P+ + L+ + +E AL+L +M +
Sbjct: 295 SLLDVYGKARKHEEAIGVLKRMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFR 354
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
G ++ L L +GK+ A ++ EM+ G P+ ++ + L + K
Sbjct: 355 GMKPDVVTYTTLISGLDRVGKIDAALATYSEMVRNGCSPNLCTYNALIKLHGVRGK---- 410
Query: 240 QNLSNKMALF 249
+ MA+F
Sbjct: 411 --FTEMMAVF 418
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 74/144 (51%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
DI N ++ +Y K++ V+K +++ M + I+ +Y S++ +G +K +L
Sbjct: 604 DINVLNAMVSIYGKNKMVKKVEEVLSLMMENSINHSAATYNSLMHMYSRLGDCEKCESIL 663
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
E+K G PD +YN I Y ++++AS L EM G+ P+ TYN+F + + +
Sbjct: 664 TEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGVKPDIVTYNIFIKSYVAN 723
Query: 129 NDLRSSWNLYCRMMGTGCLPNTQS 152
+ +L ++ GC PN ++
Sbjct: 724 IMFEEAIDLVRYLVTQGCRPNERT 747
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 88/207 (42%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G P++ +YN LI ++ + + + + +R PDV+++ +++ G G +
Sbjct: 390 GCSPNLCTYNALIKLHGVRGKFTEMMAVFDDLRSAGYVPDVVTWNTLLSVFGQNGLDSEV 449
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
V KEMK+ G P+ Y + I +Y A + M+E G+ P+ +TYN
Sbjct: 450 SGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSA 509
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ L+ M+ C P+ S L+ +K++ L D+ + +
Sbjct: 510 LARGGRWEQAEKLFAEMVDRDCKPDELSYSSLLHAYANAKKLDKMKTLSEDIYAERIERH 569
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEM 211
+ L + + L E EK+F E+
Sbjct: 570 NWLVKTLVLVNNKVNNLPETEKAFQEL 596
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 57/119 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E + +YN L+ +Y + EK I+ +++ + PD SY ++I G GQ
Sbjct: 631 MMENSINHSAATYNSLMHMYSRLGDCEKCESILTEIKSSGMRPDRYSYNTVIYAYGRKGQ 690
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+A + EMK G PD YN I++Y +A L+ +V +G PN T+N
Sbjct: 691 MKEASRLFSEMKCSGVKPDIVTYNIFIKSYVANIMFEEAIDLVRYLVTQGCRPNERTFN 749
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 84/196 (42%), Gaps = 11/196 (5%)
Query: 78 PDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWN- 136
PDA+AY A + + A R RDA + MV+ G+ P TYN+ F + + + W
Sbjct: 182 PDASAYTALVSAFSRAGRFRDAVAVFQRMVDGGVQPALVTYNVVFHAY---SKMSVPWKE 238
Query: 137 ---LYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFD 193
L M G + + L+ C+R+ A Q++++M GF + + L D
Sbjct: 239 VVALVDSMKEDGIERDRYTYNTLISCCRRRGLHREAAQVFDEMKAAGFEPDKVTFNSLLD 298
Query: 194 LLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLSNKMALFGPS 252
+ K EA M G PS V++ I A ++ +EAL+ L +M G
Sbjct: 299 VYGKARKHEEAIGVLKRMENAGCTPSVVTYNSLISAYVKDGLLEEALE-LKQEMEFRG-- 355
Query: 253 MIPKREEYLAEMSASD 268
M P Y +S D
Sbjct: 356 MKPDVVTYTTLISGLD 371
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/226 (19%), Positives = 98/226 (43%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G P+ +Y LI Y + ++A +I ++M + I PD+ +Y +++ L G+
Sbjct: 456 MKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGR 515
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A + EM + C PD +Y++ + Y AK+L L +++ + + +
Sbjct: 516 WEQAEKLFAEMVDRDCKPDELSYSSLLHAYANAKKLDKMKTLSEDIYAERIERHNWLVKT 575
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
V N+L + + + C + +V + + + V+ ++ + M+E
Sbjct: 576 LVLVNNKVNNLPETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLSLMMENS 635
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ L + +G + E E+ G +P + S+ +
Sbjct: 636 INHSAATYNSLMHMYSRLGDCEKCESILTEIKSSGMRPDRYSYNTV 681
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 76/190 (40%), Gaps = 4/190 (2%)
Query: 25 QVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYN 84
+ EKA+ +++R S D+ +++ G K +VL M E AA YN
Sbjct: 588 ETEKAF---QELRRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLSLMMENSINHSAATYN 644
Query: 85 AAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGT 144
+ + Y ++ E+ G+ P+ +YN + ++ + L+ M +
Sbjct: 645 SLMHMYSRLGDCEKCESILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCS 704
Query: 145 GCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEA 204
G P+ + +K E A+ L +V +G + + G++VEA
Sbjct: 705 GVKPDIVTYNIFIKSYVANIMFEEAIDLVRYLVTQGCRPNERTFNSILQGYSRHGRMVEA 764
Query: 205 EKSFLEMIEK 214
KSFL + K
Sbjct: 765 -KSFLSNLPK 773
Score = 40.8 bits (94), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ GVKPDIV+YN I Y + E+A +V + + P+ ++ SI+ G G+
Sbjct: 701 MKCSGVKPDIVTYNIFIKSYVANIMFEEAIDLVRYLVTQGCRPNERTFNSILQGYSRHGR 760
Query: 61 PDKARDVLKEMKEYGCYP 78
+A+ L + + YP
Sbjct: 761 MVEAKSFLSNLPK--IYP 776
>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
Length = 599
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 118/242 (48%), Gaps = 3/242 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E V PD SY LID K ++ A + +K+ ++P ++YTS+I GL +
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D AR++ +M GC P YN I C L +A L+ +M+E G P+ TYN
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSC-MFLVKLCKRQEKVEIALQLWNDMVEK 179
S+ + + L+ M GC PN +S ++ LC+ Q K++ A Q++++M K
Sbjct: 121 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQ-QSKIDQACQVFHEMEAK 179
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELA-NKQEA 238
+L D L GKL EA K F M++ G PS V++ + M LA EA
Sbjct: 180 DIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEA 239
Query: 239 LQ 240
L+
Sbjct: 240 LE 241
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 111/229 (48%), Gaps = 2/229 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G +P ++N LID +CK ++++A++++++M D+ PDV++Y+++I GL + +
Sbjct: 246 MRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIAR 305
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D AR +L++M + C P N I C A R+++A ++D MV G SP+ TYN
Sbjct: 306 VDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNT 365
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+ + L M+ G PN + LV LCK E A ++ M
Sbjct: 366 LVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPE-ACGVFAQMKSS 424
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKA 228
G + L C G++ K F EM+ G P V + + A
Sbjct: 425 GCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAA 473
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 120/266 (45%), Gaps = 2/266 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G P+ S+N +I C+ ++++A ++ +M +DI PD SY +I GL G+
Sbjct: 141 MERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGK 200
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A + + M + G P A YN I C+A L +A L M KG P+ T+N+
Sbjct: 201 LNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNI 260
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
L ++ L RM G +P+ + L+ +V+ A L DMV++
Sbjct: 261 LIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQ 320
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
++ + L LC G++ EA + M+ G P V++ + A + E +
Sbjct: 321 CKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERAR 380
Query: 241 NLSNKMALFGPSMIPKREEYLAEMSA 266
L + M G + P Y A +S
Sbjct: 381 ELLSDMVARG--LAPNVVTYTALVSG 404
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 77/186 (41%), Gaps = 4/186 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ P++V+Y L+ CK ++ +A + +M+ +P++ +YT++I G GQ
Sbjct: 386 MVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQ 445
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSP--NATTY 118
D + EM G PD Y C + R A ++ E E S Y
Sbjct: 446 VDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVY 505
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMV 177
+ + + M+ G LP + C LV LCK + E A + +++
Sbjct: 506 RFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGE-ARAVLEEIM 564
Query: 178 EKGFGS 183
+ +G
Sbjct: 565 DLAYGG 570
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 74/156 (47%), Gaps = 4/156 (2%)
Query: 106 MVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEK 165
M E+ +SP++ +Y + + L + NL+ +++ +G P+T + L+
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 166 VEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR 225
+ A +L+ DM +G + +V+ D C G L EA +MIE GH P V++
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120
Query: 226 I-KALMELANKQEALQNLSNKMALFGPSMIPKREEY 260
+ L + + +EAL L N+M G + P R +
Sbjct: 121 VMDGLCKSSRVEEALL-LFNEMERLGCT--PNRRSH 153
>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16640, mitochondrial; Flags: Precursor
gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 504
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 124/248 (50%), Gaps = 11/248 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M MG KP++V YN +ID CK +QV+ A ++ +M + I PDV++Y S+I GL G+
Sbjct: 177 MVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGR 236
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A ++ M + YPD +NA I R+ +A +EM+ + L P+ TY+L
Sbjct: 237 WSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSL 296
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L + ++ M+ GC P+ + L+ + +KVE ++L+ +M ++G
Sbjct: 297 LIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRG 356
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI-----------KAL 229
+ +L C GKL AE+ F M+ G P+ +++ + KAL
Sbjct: 357 VVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKAL 416
Query: 230 MELANKQE 237
+ LA+ Q+
Sbjct: 417 VILADMQK 424
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 107/226 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ PD+V+YN LI C + A ++V M +I PDV ++ ++I G+
Sbjct: 212 MEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGR 271
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + +EM PD Y+ I C+ RL +A + MV KG P+ TY++
Sbjct: 272 VSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSI 331
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ S + L+C M G + NT + L++ R K+ +A +++ MV G
Sbjct: 332 LINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCG 391
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
I+ +VL LCD GK+ +A +M + G V++ I
Sbjct: 392 VHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNII 437
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 78/149 (52%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD+V+Y+ LI+ YCK ++VE K+ +M + + ++YT +I G G+
Sbjct: 317 MVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGK 376
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A ++ + M G +P+ YN + C ++ A ++ +M + G+ + TYN+
Sbjct: 377 LNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNI 436
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPN 149
R + ++ +W++YC + G +P+
Sbjct: 437 IIRGMCKAGEVADAWDIYCSLNCQGLMPD 465
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 102/223 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ +G+ ++ + N L++ +C+ Q+ A + KM P ++++ S++ G +
Sbjct: 107 MQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDR 166
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A + +M G P+ YN I C +K++ +A L++ M + G+ P+ TYN
Sbjct: 167 VYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNS 226
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
S + + M P+ + L+ C ++ +V A + + +M+ +
Sbjct: 227 LISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRS 286
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I+ +L LC +L EAE+ F M+ KG P V++
Sbjct: 287 LDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTY 329
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 73/149 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV + V+Y LI YC+ ++ A +I +M + P++I+Y ++ GL G+
Sbjct: 352 MSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGK 411
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA +L +M++ G D YN IR C A + DA + + +GL P+ TY
Sbjct: 412 IEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTT 471
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPN 149
Y R + L+ +M G LPN
Sbjct: 472 MMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/181 (18%), Positives = 79/181 (43%)
Query: 43 PDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGL 102
P + ++ ++ + + + D + ++M+ G + N + +C +L A
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 103 MDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKR 162
+ +M++ G P+ T+ F + + + ++ +M+G G PN ++ +
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198
Query: 163 QEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
++V+ AL L N M + G G ++ + L LC G+ +A + M ++ P +
Sbjct: 199 SKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFT 258
Query: 223 F 223
F
Sbjct: 259 F 259
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 43/93 (46%)
Query: 131 LRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDV 190
L S +L+ M+ LP+ L+ + +K ++ + LW M G + ++
Sbjct: 62 LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121
Query: 191 LFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
L + C +L A +MI+ GH+PS V+F
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTF 154
>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 526
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 113/214 (52%), Gaps = 3/214 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + +KPD++++N LID + K+ ++ A ++ +M I+P++ +YTS+I GL + G+
Sbjct: 237 MMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGR 296
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+AR + M+ GC+PD AY + I +C K++ DA + EM +KGL+ N TY
Sbjct: 297 LDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTT 356
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK- 179
+ F + ++ M+ G PN ++ L+ KV AL ++ DM ++
Sbjct: 357 LIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKRE 416
Query: 180 --GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEM 211
G I +VL LC GKL +A F +M
Sbjct: 417 IDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDM 450
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 109/219 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M EMG+KPD+V Y +ID CK+ V+ A + +M + I PDV+ YTS++ GL G+
Sbjct: 167 MVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGR 226
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +L+ M + PD +NA I + +L DA L +EM++ ++PN TY
Sbjct: 227 WRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTS 286
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
L + ++ M GC P+ + L+ + +KVE A++++ +M +KG
Sbjct: 287 LINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKG 346
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
+ L +GK A++ F M+ +G P+
Sbjct: 347 LTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPN 385
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 117/247 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+ ++G +PDI ++ LI+ +C ++E+A +V +M + I PDV+ YT+II L G
Sbjct: 132 LMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGH 191
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A + +M+ YG PD Y + + C + R RDA L+ M+++ + P+ T+N
Sbjct: 192 VDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNA 251
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F L + LY M+ PN + L+ + +++ A Q++ M KG
Sbjct: 252 LIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKG 311
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
++ L + C K+ +A K F EM +KG + +++ + L K Q
Sbjct: 312 CFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQ 371
Query: 241 NLSNKMA 247
+ M
Sbjct: 372 EVFGHMV 378
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 96/218 (44%), Gaps = 38/218 (17%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD+V+Y LI+ +CK ++VE A KI +M + ++ + I+YT++I G GLVG+
Sbjct: 307 METKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGK 366
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEK---GLSPNATT 117
P+ A++V M G P+ YN + C ++ A + ++M ++ G+ PN T
Sbjct: 367 PNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRT 426
Query: 118 YNLFFRVFYWSNDL-----------------------------------RSSWNLYCRMM 142
YN+ ++ L + + NL+C +
Sbjct: 427 YNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLP 486
Query: 143 GTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
G PN + ++ R+ + A L+ M E G
Sbjct: 487 SKGVKPNVVTYTTMISGLFREGLMLEAHVLFRKMKEDG 524
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 103/226 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
++ MGV D+ + N L++ +C+ Q A + K+ PD+ ++TS+I G L +
Sbjct: 97 LQIMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNR 156
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A ++ +M E G PD Y I + C + +A L ++M G+ P+ Y
Sbjct: 157 IEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTS 216
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
S R + L MM P+ + L+ ++ K+ A +L+N+M++
Sbjct: 217 LVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMS 276
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
I L + LC G+L EA + F M KG P V++ +
Sbjct: 277 IAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSL 322
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/219 (19%), Positives = 99/219 (45%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P I+ + L++V K ++ + + + ++ +S D+ + ++ QP A
Sbjct: 69 PSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCNLLMNCFCQSSQPCLASSF 128
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L ++ + G PD + + I +C+ R+ +A ++++MVE G+ P+ Y
Sbjct: 129 LGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCK 188
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ + ++ +L+ +M G P+ LV + A L M+++ ++
Sbjct: 189 NGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVIT 248
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ L D GKL++A++ + EMI+ P+ ++ +
Sbjct: 249 FNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSL 287
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 52/108 (48%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV P+I +YN L+ C + ++EKA + M+ D+ +I+YT II G+ G+ A
Sbjct: 419 GVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDA 478
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLS 112
++ + G P+ Y I + +A L +M E G+S
Sbjct: 479 LNLFCSLPSKGVKPNVVTYTTMISGLFREGLMLEAHVLFRKMKEDGVS 526
>gi|148907853|gb|ABR17050.1| unknown [Picea sitchensis]
gi|224284228|gb|ACN39850.1| unknown [Picea sitchensis]
Length = 420
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 118/243 (48%), Gaps = 5/243 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G PD +YN LI+ CKD Q+E ++++M+ SP V++YT++I G G+
Sbjct: 117 MEEKGSAPDSFTYNILINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGR 176
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKG--LSPNATTY 118
D A D+L EM+ G P+ Y A I+ C + A ++ EM +G PN TY
Sbjct: 177 VDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTY 236
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMV 177
M+ +GC PN + L+ LC++ +E A+ L N+MV
Sbjct: 237 TQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAV-LLNEMV 295
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQ 236
G +++ + L D LC MG+L A + + M+EKG P ++ I+ L +
Sbjct: 296 AIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLD 355
Query: 237 EAL 239
EAL
Sbjct: 356 EAL 358
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 105/248 (42%), Gaps = 37/248 (14%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVE--KMRDEDISPDVISYTSIIGGLGLV 58
M G+ P+ V+Y LI C +VE+A +++ K+R + P+V++YT +I GL
Sbjct: 187 MEHRGITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQK 246
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
G + + L EM GC+P+ A Y A I C +A+ L++EMV G + Y
Sbjct: 247 GLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIY 306
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
N + LCK E ++ A ++ MVE
Sbjct: 307 N----------------------------------SLIDGLCKMGE-LDFAREMQILMVE 331
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEA 238
KG + L LCD G L EA EM KG P+ V++ + A++ +
Sbjct: 332 KGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDH 391
Query: 239 LQNLSNKM 246
L N+M
Sbjct: 392 ALQLVNEM 399
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 69/126 (54%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G + D+V YN LID CK +++ A ++ M ++ ++PDV +YTS+I GL G
Sbjct: 294 MVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLIQGLCDAGL 353
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A +++EM+ G P++ Y I + A R A L++EM GL P Y +
Sbjct: 354 LDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHALQLVNEMKSNGLMPAGDIYKI 413
Query: 121 FFRVFY 126
F+ Y
Sbjct: 414 LFKSLY 419
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 68/144 (47%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G P+ +Y LI C+ +A ++ +M DV+ Y S+I GL +G+ D A
Sbjct: 263 GCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFA 322
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
R++ M E G PD Y + I+ C A L +A GLM EM KG+ PN+ TY
Sbjct: 323 REMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLING 382
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLP 148
F ++ + L M G +P
Sbjct: 383 FTQADRTDHALQLVNEMKSNGLMP 406
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 66/150 (44%), Gaps = 2/150 (1%)
Query: 79 DAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLY 138
D +Y+ I C ++ +A + EM EKG +P++ TYN+ L +L
Sbjct: 90 DVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLM 149
Query: 139 CRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDM 198
M G P + L+ +V+ A+ + ++M +G + L LCD
Sbjct: 150 DEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDC 209
Query: 199 GKLVEAEKSFLEMIEKGHK--PSQVSFRRI 226
G++ A EM +G++ P+ V++ ++
Sbjct: 210 GEVERAILVLKEMKLRGNECCPNVVTYTQL 239
>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 603
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 120/239 (50%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD+++Y LI+ C D V +A K++++MR + PDV++Y +I G+ G+ D+A
Sbjct: 242 PDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKF 301
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L M YGC P+ +N +R+ C R DA L+ +M+ KG SP+ T+N+
Sbjct: 302 LNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCR 361
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
L + ++ +M GC+PN+ S L+ +++K++ A++ MV +G I+
Sbjct: 362 KRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVT 421
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKM 246
+ L LC GK A + ++ KG P +++ + + K E L +M
Sbjct: 422 YNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEM 480
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 111/216 (51%), Gaps = 3/216 (1%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD+++ LI +C+ + KA +I+E + + PDVI+Y +IGG G+ DKA V
Sbjct: 140 PDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALQV 199
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L+ M PD YN +R+ C + +L++A ++D +++ P+ TY +
Sbjct: 200 LERMS---VAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCN 256
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ + + L M GC P+ + L+ ++ +++ A++ N+M G ++
Sbjct: 257 DSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVIT 316
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+++ +C G+ ++AE+ +M+ KG PS V+F
Sbjct: 317 HNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTF 352
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 107/220 (48%), Gaps = 5/220 (2%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PD+++YN LI YCK +++KA +++E+M ++PDV++Y +I+ L G+ +A
Sbjct: 172 GAVPDVITYNVLIGGYCKSGEIDKALQVLERM---SVAPDVVTYNTILRSLCDSGKLKEA 228
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+VL + CYPD Y I C + A L+DEM +KG P+ TYN+
Sbjct: 229 MEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLING 288
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNT-QSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
L + M GC PN + L +C ++ A +L DM+ KG
Sbjct: 289 ICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMD-AERLLADMLRKGCSP 347
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ ++L + LC L A +M + G P+ +S+
Sbjct: 348 SVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSY 387
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 109/224 (48%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G KPD+V+YN LI+ CK+ ++++A K + M P+VI++ I+ + G+
Sbjct: 270 MRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGR 329
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +L +M GC P +N I C + L A ++++M + G PN+ +YN
Sbjct: 330 WMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNP 389
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEK 179
F + + M+ GC P+ + L LCK K + A+++ N + K
Sbjct: 390 LLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCK-DGKADAAVEILNQLSSK 448
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G ++ + + D L +GK A + EM KG KP +++
Sbjct: 449 GCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITY 492
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 114/254 (44%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+ M V PD+V+YN ++ C ++++A +++++ + PDVI+YT +I
Sbjct: 200 LERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSG 259
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A +L EM++ GC PD YN I C RL +A ++ M G PN T+N+
Sbjct: 260 VGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNI 319
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
R + + L M+ GC P+ + L+ R+ + A+ + M + G
Sbjct: 320 ILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHG 379
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
L + L C K+ A + M+ +G P V++ + + K +A
Sbjct: 380 CMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAV 439
Query: 241 NLSNKMALFGPSMI 254
+ N+++ G S +
Sbjct: 440 EILNQLSSKGCSPV 453
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 101/223 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P +V++N LI+ C+ R + +A ++EKM P+ +SY ++ G +
Sbjct: 340 MLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKK 399
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + L+ M GCYPD YN + C + A +++++ KG SP TYN
Sbjct: 400 MDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNT 459
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L M G P+ + L++ + KV+ A+++++DM
Sbjct: 460 VIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLS 519
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + + LC + A M+EKG KP++ ++
Sbjct: 520 IKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATY 562
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 101/205 (49%), Gaps = 3/205 (1%)
Query: 22 KDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAA 81
++ ++E+ K +E+M + PDVI+ TS+I G G+ KA +++ ++ G PD
Sbjct: 119 RNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDVI 178
Query: 82 AYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRM 141
YN I YC + + A +++ M ++P+ TYN R S L+ + + R
Sbjct: 179 TYNVLIGGYCKSGEIDKALQVLERM---SVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQ 235
Query: 142 MGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKL 201
M C P+ + L++ V A++L ++M +KG ++ +VL + +C G+L
Sbjct: 236 MQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRL 295
Query: 202 VEAEKSFLEMIEKGHKPSQVSFRRI 226
EA K M G +P+ ++ I
Sbjct: 296 DEAIKFLNNMPLYGCQPNVITHNII 320
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 91/181 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PDIV+YN L+ CKD + + A +I+ ++ + SP +I+Y ++I GL VG+
Sbjct: 410 MVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGK 469
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A ++L+EM+ G PD Y+ +R ++ +A + +M + P+A TYN
Sbjct: 470 TEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNA 529
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + M+ GC P + L++ + E AL+L N++ +G
Sbjct: 530 IMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEGIADEGLAEEALELLNELCSRG 589
Query: 181 F 181
F
Sbjct: 590 F 590
>gi|18394846|ref|NP_564110.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174883|sp|Q9LN22.1|PPR54_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g20300, mitochondrial; Flags: Precursor
gi|9558596|gb|AAF88159.1|AC026234_10 Contains similarity to a hypothetical protein T3P18.15 gi|5454201
from Arabidopsis thaliana BAC T3P18 gb|AC005698 and
contains multiple PPR PF|01535 repeats [Arabidopsis
thaliana]
gi|17386104|gb|AAL38598.1|AF446865_1 At1g20300/F14O10_8 [Arabidopsis thaliana]
gi|15450347|gb|AAK96467.1| At1g20300/F14O10_8 [Arabidopsis thaliana]
gi|332191838|gb|AEE29959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 537
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 126/251 (50%), Gaps = 1/251 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G++P++ +Y+ +ID C+ Q+ +A+ + M D +P+ I++ +++ G+
Sbjct: 281 MKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGR 340
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+K V +MK+ GC PD YN I +C + L +A +++ M++K NA+T+N
Sbjct: 341 TEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNT 400
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
FR D+ + +Y +MM C PNT + L+++ + ++ L++ +M +K
Sbjct: 401 IFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKE 460
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMI-EKGHKPSQVSFRRIKALMELANKQEAL 239
+ +L + C MG A K F EM+ EK PS + + A + A + +
Sbjct: 461 VEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKH 520
Query: 240 QNLSNKMALFG 250
+ L KM G
Sbjct: 521 EELVEKMIQKG 531
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 105/246 (42%), Gaps = 1/246 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ V+ I ++ LI Y + +A +M D PD I+++ +I L +
Sbjct: 177 MKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRR 236
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A+ +K+ PD Y +R +C A + +A + EM G+ PN TY++
Sbjct: 237 ASEAQSFFDSLKD-RFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSI 295
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + +++ M+ +GC PN + L+++ + + E LQ++N M + G
Sbjct: 296 VIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLG 355
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ + L + C L A K MI+K + + +F I +E
Sbjct: 356 CEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAH 415
Query: 241 NLSNKM 246
+ +KM
Sbjct: 416 RMYSKM 421
>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
Length = 758
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 106/219 (48%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G +PD V+YN + C++ V A K+++ M E PDV +Y ++I L G+ D+A
Sbjct: 297 GFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEA 356
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ ++ +M + GC PD +N I RL +A L E+ KGLSP+ T+N+
Sbjct: 357 KGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINA 416
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
D L+ M +GC P+ + L+ K+ AL L N+M G
Sbjct: 417 LCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRS 476
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + + D LC ++ EAE+ F +M +G S V+F
Sbjct: 477 TVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTF 515
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 112/258 (43%), Gaps = 35/258 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G++PD+V+ N LI C+ QV A ++E+M ++PD ++T+++ G G
Sbjct: 188 MTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGS 247
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A V +M E GC P N I YC R+ DA G + + + G P+ TYN
Sbjct: 248 IEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNT 307
Query: 121 FFR--------------------------VFYWSN---------DLRSSWNLYCRMMGTG 145
F VF ++ +L + + +M+ G
Sbjct: 308 FVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRG 367
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
CLP+T + L+ Q ++E AL L ++ KG + ++L + LC +G
Sbjct: 368 CLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGI 427
Query: 206 KSFLEMIEKGHKPSQVSF 223
+ F EM G P +V++
Sbjct: 428 RLFEEMKSSGCTPDEVTY 445
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 109/229 (47%), Gaps = 6/229 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G P V+ N LI+ YCK +VE A +++ + PD ++Y + + GL G
Sbjct: 258 MMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGH 317
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAK--RLRDASGLMDEMVEKGLSPNATTY 118
A V+ M + G PD YN I C++K L +A G++++MV++G P+ TT+
Sbjct: 318 VSHALKVMDLMLQEGHDPDVFTYNTVIN--CLSKNGELDEAKGIVNQMVDRGCLPDTTTF 375
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMV 177
N N L + +L + G P+ + L+ LCK + + ++L+ +M
Sbjct: 376 NTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDP-HLGIRLFEEMK 434
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G + ++L D LC MGKL A EM G S V++ I
Sbjct: 435 SSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTI 483
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 115/248 (46%), Gaps = 4/248 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ PD+ ++N LI+ CK ++ E+M+ +PD ++Y +I L +G+ A
Sbjct: 402 GLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNA 461
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
D+L EM+ GC YN I C R+ +A + D+M +G+S +A T+N
Sbjct: 462 LDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDG 521
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
+ + + L +M+ G PN + L CK Q ++ A + M GF
Sbjct: 522 LCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCK-QGNIKKAADILETMTANGFEI 580
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNL 242
++ L + LC G+ A K M KG +P+ ++ I++L N ++AL NL
Sbjct: 581 DVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDAL-NL 639
Query: 243 SNKMALFG 250
+M G
Sbjct: 640 FREMTEVG 647
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 98/202 (48%), Gaps = 5/202 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ V++N LID CK ++++ A +++E+M E + P+ I+Y SI+ G
Sbjct: 503 MDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGN 562
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA D+L+ M G D Y I C A R + A L+ M KG+ P YN
Sbjct: 563 IKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNP 622
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+ + N+LR + NL+ M G P+ + + + LC+ ++ A +MV K
Sbjct: 623 VIQSLFRRNNLRDALNLFREMTEVGEPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMVNK 682
Query: 180 G----FGSYILVSDVLFDLLCD 197
G F S+ ++++ L +L D
Sbjct: 683 GFMPEFSSFRMLAEGLLNLGMD 704
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 105/225 (46%), Gaps = 2/225 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G PD V+YN LID C ++ A ++ +M ++Y +II L +
Sbjct: 433 MKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMR 492
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A +V +M G A +N I C AKR+ DA+ L+++MV++GL PN TYN
Sbjct: 493 IEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNS 552
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+ +++ + ++ M G + + L+ LCK + ++AL+L M K
Sbjct: 553 ILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCK-AGRTQVALKLLRGMRIK 611
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
G + + L L +A F EM E G P ++++
Sbjct: 612 GIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVGEPPDALTYK 656
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 103/249 (41%), Gaps = 3/249 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDED---ISPDVISYTSIIGGLGL 57
MR G + V ++ Y + R+ + A +V D D + D + + ++ L
Sbjct: 115 MRREGHQVRAVVVRSFVESYARLRRFDDAVDLVLNQLDNDTFGVQADTVVFNHLLNVLVE 174
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
+ V EM G PD N I+ C A ++R A +++EM G++P+ TT
Sbjct: 175 GSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETT 234
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
+ + F + ++ + +MM GC P + L+ + +VE AL +
Sbjct: 235 FTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEI 294
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQE 237
GF + + LC G + A K M+++GH P ++ + + + +
Sbjct: 295 ADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELD 354
Query: 238 ALQNLSNKM 246
+ + N+M
Sbjct: 355 EAKGIVNQM 363
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/223 (20%), Positives = 87/223 (39%), Gaps = 38/223 (17%)
Query: 39 EDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRD 98
ED +P Y I+ LG G D +++EM+ G A + + +Y +R D
Sbjct: 83 EDFAPSSAVYEEIVQKLGTAGAFDLMEGLVREMRREGHQVRAVVVRSFVESYARLRRFDD 142
Query: 99 ASGLM--------------------------------------DEMVEKGLSPNATTYNL 120
A L+ +EM +G+ P+ T N
Sbjct: 143 AVDLVLNQLDNDTFGVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNT 202
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ +R++ + M G P+ + L++ + +E AL++ M+E G
Sbjct: 203 LIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAG 262
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ +VL + C MG++ +A + I G +P QV++
Sbjct: 263 CSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTY 305
>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 128/249 (51%), Gaps = 6/249 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ +G +PD+V YN ++D CKDR V +A I KM+ I P V++YTS+I GL +G+
Sbjct: 222 MKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGR 281
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A +L EMK PD A++ I C + +A ++ M E G+ P+ TYN
Sbjct: 282 WKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNT 341
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ + ++ M+ G +P+ S LV + ++++ A QL+++M +G
Sbjct: 342 LMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRG 401
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ + L LC + +EAE+ F +M G+ P+ V++ L++ +KQ L
Sbjct: 402 LIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTY---SILLDCLSKQGYLD 458
Query: 241 NLSNKMALF 249
M LF
Sbjct: 459 ---QAMGLF 464
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 106/220 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M EMGV+PD+ +YN L++ YC +V +A K+ E M + PDV S++ ++ G +
Sbjct: 327 MTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKR 386
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A+ + EM G PD +YN I C A+R +A L +M G PN TY++
Sbjct: 387 IDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSI 446
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
L + L+ M +G P+ + ++ + K + A +L+ ++ KG
Sbjct: 447 LLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKG 506
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQ 220
V D +C G L EA K+F +M + P+Q
Sbjct: 507 LQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDDCSPAQ 546
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 106/221 (47%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
++G++P++++++ LI+ +C + ++ +A ++ + M P+V SY+ II GL VG+
Sbjct: 154 KLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTT 213
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
+ +L+ MK GC PD YN + C + + +A + +M G+ P TY
Sbjct: 214 EVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLI 273
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
+ ++ L M G +P+ + L+ + ++ +V A + M E G
Sbjct: 274 HGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVE 333
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + L + C ++VEA K F MI KG P SF
Sbjct: 334 PDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSF 374
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 105/226 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ D++S LI+ +C+ V+ + ++ K+ + P+VI+++++I G + G+
Sbjct: 117 MEMAGISHDVLSLTILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGK 176
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++ M G P+ +Y+ I+ C + + L++ M G P+ YN
Sbjct: 177 IGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNT 236
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + +++C+M GTG LP + L+ + + + A L N+M
Sbjct: 237 IVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGN 296
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ VL D++C G++ EA M E G +P ++ +
Sbjct: 297 IMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTL 342
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 98/234 (41%), Gaps = 6/234 (2%)
Query: 24 RQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAY 83
R + A M + + P ++ + + L + + K+M+ G D +
Sbjct: 70 RNINDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSL 129
Query: 84 NAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMG 143
I +C + ++ ++++ GL PN T++ F + + L+ M+
Sbjct: 130 TILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVA 189
Query: 144 TGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLV 202
G PN S ++K LC+ + E+ ++L M G +++ + + D LC +
Sbjct: 190 RGYKPNVHSYSIIIKGLCRVGKTTEV-IKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVN 248
Query: 203 EAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLSNKMALFGPSMIP 255
EA F +M G P+ V++ I L L +EA L N+M G +++P
Sbjct: 249 EAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAF-GLLNEMK--GGNIMP 299
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 43/85 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+KPD+V+YN +ID CK + + A ++ ++ + + P+ T I G+ G
Sbjct: 467 MENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGL 526
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNA 85
D+A ++M++ C P N
Sbjct: 527 LDEAHKAFRQMEKDDCSPAQGCING 551
>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 125/271 (46%), Gaps = 36/271 (13%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ P+++S+N +I CK V++A ++ +M + PDV +Y +++ GL + D+A
Sbjct: 184 ISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAV 243
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+L EM+ GC+P + +N I C + + L+D M KG PN TYN
Sbjct: 244 LLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGL 303
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCK----------------------- 161
L + +L RM+ + C+PN + L+ L K
Sbjct: 304 CLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANE 363
Query: 162 -----------RQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLE 210
++EK E A+ LW MVEKG I+V L D LC GKL EA++ E
Sbjct: 364 YAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCE 423
Query: 211 MIEKGHKPSQVSFRR-IKALMELANKQEALQ 240
M+ KG P+ ++ IK + N Q+A++
Sbjct: 424 MVNKGCTPNAFTYSSLIKGFFKTGNSQKAIR 454
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 114/242 (47%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G P+ V+YN +I+ C +++KA ++++M P+ ++Y ++I GL G+
Sbjct: 288 GCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDG 347
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+L ++E G + + AY+ I ++ +A GL +MVEKG PN Y+
Sbjct: 348 VHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDG 407
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
L + + C M+ GC PN + L+K + + A+++W +M +
Sbjct: 408 LCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPN 467
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSN 244
+ VL LC+ GKL EA + M+ +G +P V++ + + A E L N
Sbjct: 468 EICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFN 527
Query: 245 KM 246
+M
Sbjct: 528 EM 529
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 104/218 (47%), Gaps = 2/218 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P+ V+Y LI+ K + ++ + + + +Y+++I GL + ++A +
Sbjct: 326 PNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGL 385
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
K+M E GC P+ Y+A I C +L +A ++ EMV KG +PNA TY+ + F+
Sbjct: 386 WKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFK 445
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ + + + ++ M C+PN L+ K+ A+ +W M+ +G ++
Sbjct: 446 TGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVA 505
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMI--EKGHKPSQVSF 223
+ LC+ G + K F EM+ E +P V++
Sbjct: 506 YSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTY 543
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 108/224 (48%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+ E G + +Y+ LI K+ + E+A + +KM ++ P+++ Y+++I GL G+
Sbjct: 354 LEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGK 413
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A+++L EM GC P+A Y++ I+ + + A + EM + PN Y++
Sbjct: 414 LDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSV 473
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV--E 178
LR + ++ M+G G P+ + ++ VE+ L+L+N+M+ E
Sbjct: 474 LIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQE 533
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
++ ++L LC + A M+++G P ++
Sbjct: 534 SDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLIT 577
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 113/264 (42%), Gaps = 53/264 (20%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G +P+IV Y+ LID C++ ++++A +I+ +M ++ +P+ +Y+S+I G G
Sbjct: 389 MVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGN 448
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGL--------- 111
KA V KEM + C P+ Y+ I C +LR+A + M+ +GL
Sbjct: 449 SQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSS 508
Query: 112 ----------------------------SPNATTYNLFFRVFYWSNDLRSSWNLYCRMMG 143
P+ TYN+ R N + + +L M+
Sbjct: 509 MIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLD 568
Query: 144 TGCLPNTQSC-MFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLV 202
GC P+ +C +FL L ++ + + +++V + L ++V
Sbjct: 569 RGCNPDLITCNIFLNALREKLNPPQDGREFLDELVVR---------------LHKRQRIV 613
Query: 203 EAEKSFLEMIEKGHKPSQVSFRRI 226
A K M++K P+ ++ RI
Sbjct: 614 GAAKIIEVMLQKFLPPNASTWERI 637
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 109/247 (44%), Gaps = 2/247 (0%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVE--KMRDEDISPDVISYTSIIGGLGLVGQ 60
E + + S+N +++V ++ +A + E +ISP+V+S+ +I + +G
Sbjct: 144 EFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGL 203
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A +V +EM C PD Y + C R+ +A L+DEM +G P++ T+N+
Sbjct: 204 VDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNV 263
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
D+ L M GC+PN + ++ + K++ A+ L + MV
Sbjct: 264 LINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASK 323
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ L + L G+ V+ + E+GH ++ ++ + + + K E
Sbjct: 324 CVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAM 383
Query: 241 NLSNKMA 247
L KM
Sbjct: 384 GLWKKMV 390
>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 115/223 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++G++PD +++N LI+ C + ++++A + +M PDVISY+++I GL G
Sbjct: 153 MFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGN 212
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +L++M+E GC P+ AY I + C + DA L+ EMV++G+ P+ TY+
Sbjct: 213 TSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYST 272
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F L + L+ M+G +PNT + LV ++ V A ++ M +KG
Sbjct: 273 ILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKG 332
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ L D C ++ EA+K M++KG P S+
Sbjct: 333 AEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSY 375
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 116/244 (47%), Gaps = 3/244 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G KP++V+Y +ID CKD V A ++ +M D I PDV++Y++I+ G +G
Sbjct: 223 MEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGH 282
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A + EM P+ + + C + +A + + M +KG PNA TYN
Sbjct: 283 LNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNA 342
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+ +N + + + M+ GC P S L+ CKR+ +++ A L +M EK
Sbjct: 343 LMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRR-RLDEAKSLLVEMSEK 401
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEA 238
+ L LC +G+ EA F EM G P +++ + L + + EA
Sbjct: 402 ELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEA 461
Query: 239 LQNL 242
L+ L
Sbjct: 462 LKLL 465
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 126/261 (48%), Gaps = 4/261 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ PD+V+Y+ ++ +C + +A + +M ++ P+ +++T ++ GL G
Sbjct: 258 MVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGM 317
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR V + M + G P+A YNA + YC+ ++ +A ++D MV+KG +P +YN+
Sbjct: 318 VSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNI 377
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+ L + +L M P+T + L++ LC+ E AL L+ +M
Sbjct: 378 LINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQE-ALNLFKEMCSS 436
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
G ++ L D LC G L EA K M E +P V + + M +A K E
Sbjct: 437 GLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVA 496
Query: 240 QNLSNKMALFGPSMIPKREEY 260
+ L +K LF + P Y
Sbjct: 497 KELFSK--LFADGIQPTIRTY 515
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 97/181 (53%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G P + SYN LI+ YCK R++++A ++ +M +++++PD ++Y++++ GL VG+
Sbjct: 363 MVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGR 422
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
P +A ++ KEM G PD Y+ + C L +A L+ M E + P+ YN+
Sbjct: 423 PQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNI 482
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + L + L+ ++ G P ++ ++K ++ + A +L+ M + G
Sbjct: 483 LIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDG 542
Query: 181 F 181
F
Sbjct: 543 F 543
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 99/223 (44%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M M +P +V + + K +Q + +M ++ +V S +I L +
Sbjct: 83 MLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLCRLNH 142
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A VL +M + G PDA +N I CI +++A GL +EMV +G P+ +Y+
Sbjct: 143 VVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYST 202
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
S + + L +M GC PN + ++ + V A+ L ++MV++G
Sbjct: 203 VINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRG 262
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + C +G L EA F EM+ + P+ V+F
Sbjct: 263 IPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTF 305
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 96/194 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E + PD V+Y+ L+ C+ + ++A + ++M + PD+++Y++++ GL G
Sbjct: 398 MSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGH 457
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A +LK M+E PD YN I IA +L A L ++ G+ P TY +
Sbjct: 458 LDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTI 517
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ L+ +M G LPN+ S +++ + + A++L ++MV K
Sbjct: 518 MIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKR 577
Query: 181 FGSYILVSDVLFDL 194
F + +L DL
Sbjct: 578 FSADSSTFQMLLDL 591
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 83/162 (51%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ PD+++Y+ L+D CK +++A K+++ M++ I PD++ Y +I G+ + G+ + A
Sbjct: 437 GLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVA 496
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+++ ++ G P Y I+ +A L +M + G PN+ +YN+ +
Sbjct: 497 KELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQG 556
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKV 166
F + D ++ L M+G ++ + L+ L R E +
Sbjct: 557 FLQNQDSSTAIRLIDEMVGKRFSADSSTFQMLLDLESRDEII 598
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 77/184 (41%)
Query: 43 PDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGL 102
P V+ + +G + Q + +M +G + + N I C + A +
Sbjct: 90 PSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLCRLNHVVFAISV 149
Query: 103 MDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKR 162
+ +M + G+ P+A T+N +++ + L+ M+ G P+ S ++ +
Sbjct: 150 LGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCK 209
Query: 163 QEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
+ALQL M EKG ++ + D LC + +A EM+++G P V+
Sbjct: 210 SGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVT 269
Query: 223 FRRI 226
+ I
Sbjct: 270 YSTI 273
>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
Length = 603
Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 111/229 (48%), Gaps = 2/229 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G +P ++N LID +CK ++++A++++++M D+ PDV++Y+++I GL + +
Sbjct: 246 MRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIAR 305
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D AR +L++M + C P N I C A R+++A ++D MV G SP+ TYN
Sbjct: 306 VDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNT 365
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+ + L M+ G PN + LV LCK E A ++ M
Sbjct: 366 LVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPE-ACGVFAQMKSS 424
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKA 228
G + L C G++ K F EM+ G P V + + A
Sbjct: 425 GCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAA 473
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 117/242 (48%), Gaps = 3/242 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E V PD SY LID K ++ A + +K+ ++P ++YTS+I GL +
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D AR++ +M GC P YN I C L +A L+ +M+E G P+ TYN
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSC-MFLVKLCKRQEKVEIALQLWNDMVEK 179
S + + L+ M GC PN +S ++ LC+ Q K++ A Q++++M +
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQ-QSKIDQACQVFHEMEAR 179
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELA-NKQEA 238
+L D L GKL EA K F M++ G PS V++ + M LA EA
Sbjct: 180 DIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEA 239
Query: 239 LQ 240
L+
Sbjct: 240 LE 241
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 119/266 (44%), Gaps = 2/266 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G P+ S+N +I C+ ++++A ++ +M DI PD SY +I GL G+
Sbjct: 141 MERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGK 200
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A + + M + G P A YN I C+A L +A L M KG P+ T+N+
Sbjct: 201 LNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNI 260
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ L RM G +P+ + L+ +V+ A L DMV++
Sbjct: 261 LIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQ 320
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
++ + L LC G++ EA + M+ G P V++ + A + E +
Sbjct: 321 CKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERAR 380
Query: 241 NLSNKMALFGPSMIPKREEYLAEMSA 266
L + M G + P Y A +S
Sbjct: 381 ELLSDMVARG--LAPNVVTYTALVSG 404
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 77/186 (41%), Gaps = 4/186 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ P++V+Y L+ CK ++ +A + +M+ +P++ +YT++I G GQ
Sbjct: 386 MVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQ 445
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSP--NATTY 118
D + EM G PD Y C + R A ++ E E S Y
Sbjct: 446 VDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVY 505
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMV 177
+ + + M+ G LP + C LV LCK + E A + +++
Sbjct: 506 RFAVDGLLDAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGE-ARAVLEEIM 564
Query: 178 EKGFGS 183
+ +G
Sbjct: 565 DLAYGG 570
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 73/156 (46%), Gaps = 4/156 (2%)
Query: 106 MVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEK 165
M E+ +SP++ +Y + + L + +L+ +++ +G P+T + L+
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 166 VEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR 225
+ A +L+ DM +G + +V+ D C G L EA +MIE GH P V++
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120
Query: 226 I-KALMELANKQEALQNLSNKMALFGPSMIPKREEY 260
+ L + +EAL L N+M G + P R +
Sbjct: 121 VMDGLCKSGRVEEALL-LFNEMERLGCT--PNRRSH 153
>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
Length = 580
Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 111/223 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G KP++VSYN +I Y +E A +I++ MR + I PD +Y S+I G+ G+
Sbjct: 199 MEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGR 258
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A + +M E G P+A YN I YC L A DEMV+KG+ P+ +TYNL
Sbjct: 259 LEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNL 318
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + ++ M G +P+ + L+ R + A L N+M+ KG
Sbjct: 319 LVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKG 378
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ L +L ++ EA+ F +++++G P + F
Sbjct: 379 IEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMF 421
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 109/226 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E+G+ P+ V+YN LID YC +E+A+ ++M + I P V +Y ++ L + G+
Sbjct: 269 MVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGR 328
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A D++KEM++ G PDA YN I Y + A L +EM+ KG+ P TY
Sbjct: 329 MGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTS 388
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
V N ++ + +L+ +++ G P+ ++ VE A L +M K
Sbjct: 389 LIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKS 448
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + L C GK+ EA EM +G KP +S+ +
Sbjct: 449 VPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTL 494
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 107/222 (48%)
Query: 25 QVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYN 84
+++KA + + M P+V+SY +II G G + AR +L M+ G PD+ Y
Sbjct: 188 KLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYG 247
Query: 85 AAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGT 144
+ I C RL +ASGL D+MVE GL PNA TYN + DL +++ M+
Sbjct: 248 SLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKK 307
Query: 145 GCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEA 204
G +P+ + LV + ++ A + +M +KG + ++L + G A
Sbjct: 308 GIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRA 367
Query: 205 EKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKM 246
EM+ KG +P+ V++ + ++ N+ + +L K+
Sbjct: 368 FDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKI 409
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 97/182 (53%), Gaps = 2/182 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G++P V+Y LI V + ++++A + EK+ D+ +SPDVI + ++I G G
Sbjct: 374 MLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGN 433
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A +LKEM PD +N ++ C ++ +A L+DEM +G+ P+ +YN
Sbjct: 434 VERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNT 493
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+ D++ ++ + M+ G P + L+K LCK QE ++A +L +MV K
Sbjct: 494 LISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEG-DLAEELLKEMVNK 552
Query: 180 GF 181
G
Sbjct: 553 GI 554
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 106/223 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G+ PD ++YN LI+ Y + ++A+ + +M + I P ++YTS+I L +
Sbjct: 339 MRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNR 398
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A D+ +++ + G PD +NA I +C + A L+ EM K + P+ T+N
Sbjct: 399 MKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNT 458
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + L M G P+ S L+ R+ ++ A + ++M+ G
Sbjct: 459 LMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIG 518
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
F +L + L LC + AE+ EM+ KG P ++
Sbjct: 519 FNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTY 561
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 85/156 (54%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
+ GV PD++ +N +ID +C + VE+A+ ++++M + + PD +++ +++ G G+ +
Sbjct: 411 DQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVE 470
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
+AR +L EMK G PD +YN I Y ++DA + DEM+ G +P TYN
Sbjct: 471 EARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALI 530
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK 158
+ + + + L M+ G P+ + + L++
Sbjct: 531 KCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIE 566
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 49/87 (56%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G+KPD +SYN LI Y + ++ A+ + ++M +P +++Y ++I L +
Sbjct: 479 MKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQE 538
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAI 87
D A ++LKEM G PD + Y + I
Sbjct: 539 GDLAEELLKEMVNKGISPDDSTYLSLI 565
>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
Length = 548
Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 116/219 (52%), Gaps = 2/219 (0%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ P++++Y+ L+D + K+ +V +A ++ E+M I PD+++Y+S++ GL L + D+A
Sbjct: 256 ITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEAN 315
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+ M GC D +YN I +C AKR+ D L EM ++GL N TYN + F
Sbjct: 316 QMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGF 375
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + D+ + + +M G P+ + + L LC E +E AL ++ DM ++
Sbjct: 376 FQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGE-LEKALVIFEDMQKREMDLD 434
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I+ + +C GK+ EA F + KG KP V++
Sbjct: 435 IVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTY 473
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 125/252 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++G +PD V+ L++ +C+ +V A +V+KM + PD+++Y +II L +
Sbjct: 146 MLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKR 205
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A D KE++ G P+ Y A + C + R DA+ L+ +M++K ++PN TY+
Sbjct: 206 VNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSA 265
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + + + L+ M+ P+ + LV ++++ A Q+++ MV KG
Sbjct: 266 LLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKG 325
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ ++ + L + C ++ + K F EM ++G + V++ + A + Q
Sbjct: 326 CLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQ 385
Query: 241 NLSNKMALFGPS 252
++M FG S
Sbjct: 386 EFFSQMDFFGIS 397
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 111/218 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E+G KPDIV+YN +ID CK ++V A+ +++ + I P+V++YT+++ GL +
Sbjct: 181 MVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSR 240
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +L +M + P+ Y+A + + ++ +A L +EMV + P+ TY+
Sbjct: 241 WSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSS 300
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + ++ M+ GCL + S L+ + ++VE ++L+ +M ++G
Sbjct: 301 LVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRG 360
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
S + + L G + +A++ F +M G P
Sbjct: 361 LVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISP 398
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 122/281 (43%), Gaps = 17/281 (6%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G++ D+ ++N +I+ +C QV A I+ KM PD ++ S++ G +
Sbjct: 111 MEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNR 170
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A ++ +M E G PD AYNA I + C KR+ DA E+ KG+ PN TY
Sbjct: 171 VSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTA 230
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
S+ + L M+ PN + L+ + KV A +L+ +MV
Sbjct: 231 LVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMS 290
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF----------RRIKALM 230
I+ L + LC ++ EA + F M+ KG VS+ +R++ M
Sbjct: 291 IDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGM 350
Query: 231 ELANKQEALQNLSNKM-------ALFGPSMIPKREEYLAEM 264
+L + +SN + F + K +E+ ++M
Sbjct: 351 KLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM 391
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 85/182 (46%), Gaps = 2/182 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G D+VSYN LI+ +CK ++VE K+ +M + + ++Y ++I G G
Sbjct: 321 MVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGD 380
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA++ +M +G PD YN + C L A + ++M ++ + + TY
Sbjct: 381 VDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTT 440
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEK 179
R + + +W+L+C + G P+ + + LC + E+ L+ M ++
Sbjct: 441 VIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVE-ALYTKMKQE 499
Query: 180 GF 181
G
Sbjct: 500 GL 501
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 95/216 (43%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P IV +N L+ K ++ + + +KM I D+ ++ +I Q A +
Sbjct: 83 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L +M + G PD + + +C R+ DA L+D+MVE G P+ YN
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 202
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ + +++ + + G PN + LV + A +L +DM++K ++
Sbjct: 203 TKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVIT 262
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
L D GK++EA++ F EM+ P V++
Sbjct: 263 YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTY 298
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 98/215 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M M + PDIV+Y+ L++ C ++++A ++ + M + DV+SY ++I G +
Sbjct: 286 MVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKR 345
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ + +EM + G + YN I+ + A + A +M G+SP+ TYN+
Sbjct: 346 VEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNI 405
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ +L + ++ M + + +++ + KVE A L+ + KG
Sbjct: 406 LLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKG 465
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
I+ + LC G L E E + +M ++G
Sbjct: 466 LKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEG 500
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 70/149 (46%), Gaps = 8/149 (5%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ PDI +YN L+ C + ++EKA I E M+ ++ D+++YT++I G+ G+
Sbjct: 391 MDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGK 450
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A + + G PD Y + C L + L +M ++GL N T +
Sbjct: 451 VEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS- 509
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPN 149
D+ S L +M+ G P+
Sbjct: 510 -------DGDITLSAELIKKMLSCGYAPS 531
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 69/149 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ + V+YN LI + + V+KA + +M ISPD+ +Y ++GGL G+
Sbjct: 356 MSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGE 415
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA + ++M++ D Y IR C ++ +A L + KGL P+ TY
Sbjct: 416 LEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTT 475
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPN 149
L LY +M G + N
Sbjct: 476 MMSGLCTKGLLHEVEALYTKMKQEGLMKN 504
>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
Length = 1060
Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 106/209 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV P+I YNCLID YCK + +A + ++ +I PDV +Y+ +I GL V +
Sbjct: 324 MASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDR 383
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A +L+EMK+ G P+A YN I YC + A + +M EKG+ PN T++
Sbjct: 384 MEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFST 443
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + ++ LY M+ G LP+ + L+ + + A +L +M E G
Sbjct: 444 LIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAG 503
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFL 209
+ L D LC G++ +A K FL
Sbjct: 504 LHPNVFTLSCLIDGLCKDGRISDAIKLFL 532
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 118/241 (48%), Gaps = 1/241 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G+ P++ +YN ++D YCK V+KA ++ +M + + P+V+++ +I GL +
Sbjct: 254 MRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDE 313
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
AR L +M +G P+ YN I YC A L +A L E+ + + P+ TY++
Sbjct: 314 MVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSI 373
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + + L M G LPN + L+ ++ +E A+++ + M EKG
Sbjct: 374 LIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKG 433
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
I+ L D C GK+ A + EM+ KG P V++ I + N +EA
Sbjct: 434 IEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAF 493
Query: 240 Q 240
+
Sbjct: 494 R 494
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 127/297 (42%), Gaps = 37/297 (12%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P++V+Y LID C+ KA+++ ++M ++ I P V+ YT +I GL +
Sbjct: 184 MVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESR 243
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + + M+ G P+ YN + YC ++ A L EM+ GL PN T+ +
Sbjct: 244 ISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGI 303
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPN--TQSCMF----------------------- 155
++++ S+ M G +PN +C+
Sbjct: 304 LIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHE 363
Query: 156 ----------LVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
L+K +++E A L +M +KGF + + L D C G + +A
Sbjct: 364 ILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAI 423
Query: 206 KSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFGPSMIPKREEYLA 262
+ +M EKG +P+ ++F + A K EA L +M + G ++P Y A
Sbjct: 424 EVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKG--LLPDVVAYTA 478
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 90/203 (44%), Gaps = 2/203 (0%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
+M V P + + N ++D K + + +K+ M SP+V++Y ++I G G
Sbjct: 151 KMDVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFL 210
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
KA + EM E +P Y IR C R+ +A + M G+ PN TYN
Sbjct: 211 KAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMM 270
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGF 181
+ ++ + LY M+G G LPN + L+ LCK E V A + DM G
Sbjct: 271 DGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVS-ARKFLIDMASFGV 329
Query: 182 GSYILVSDVLFDLLCDMGKLVEA 204
I V + L D C G L EA
Sbjct: 330 VPNIFVYNCLIDGYCKAGNLSEA 352
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 106/264 (40%), Gaps = 58/264 (21%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G++P+I++++ LID YCK ++E A + +M + + PDV++YT++I G G
Sbjct: 429 MTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGN 488
Query: 61 PDKARDVLKEMKEYG--------------------------------------------- 75
+A + KEM+E G
Sbjct: 489 TKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELD 548
Query: 76 ---CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLR 132
C P+ Y A I+ C R+ AS +M GL P+ T + + + + LR
Sbjct: 549 RSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLR 608
Query: 133 SSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE-------KGFGSYI 185
L ++ G +PN+ L K + ++ AL + V+ + +GSY
Sbjct: 609 DVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALSFCGEGVQPLDRVNSEPWGSYT 668
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFL 209
+ S LC + + E S+L
Sbjct: 669 IRSRF---QLCVVTEKKECHSSYL 689
Score = 40.8 bits (94), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+R G+ D+ N LI++Y K ++ A ++ + + +D++ ++TS+I G L GQ
Sbjct: 775 IRHRGLDTDLCLNNSLINMYSKCGEIGTARRLFDGTQKKDVT----TWTSMIVGHALHGQ 830
Query: 61 PDKARDVLKEMKE 73
++A + EMKE
Sbjct: 831 AEEALQLFTEMKE 843
>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 109/202 (53%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
KP ++SY+ +ID CKDR+ ++A + E+M+ + ++P VISYTS+I G G+ ++A+
Sbjct: 239 KPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKR 298
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
+ EM G P+ +N I C ++ +A L++ M+++G+ PN TYN F
Sbjct: 299 LFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFC 358
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
DL S+ L+ M GC P+ L+ + KVE A++L+N M++ G +
Sbjct: 359 LVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVK 418
Query: 187 VSDVLFDLLCDMGKLVEAEKSF 208
L L GK+ +A+K F
Sbjct: 419 TYGALLTGLFQGGKVGDAKKLF 440
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 112/225 (49%), Gaps = 4/225 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV+P++V++N LIDV CK+ +V +A ++E M I P++++Y S+I G LVG
Sbjct: 303 MVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGD 362
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ AR++ M GC PD Y I YC ++ +A L + M++ G P+ TY
Sbjct: 363 LNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGA 422
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSC--MFLVKLCKRQEKVEIALQLWNDMVE 178
+ + + L+ M G +P +FL LCK E A++L+N +
Sbjct: 423 LLTGLFQGGKVGDAKKLFGVMKVYG-IPGDLYIYGIFLNGLCKNGCLFE-AMELFNKLKS 480
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I + L D LC GKL A + F ++ ++ +P V++
Sbjct: 481 YNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTY 525
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 110/224 (49%), Gaps = 6/224 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDE------DISPDVISYTSIIGG 54
M+++G P+ ++Y L+ C+ + A K+ ++M ++ + P VISY+ II
Sbjct: 192 MQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDA 251
Query: 55 LGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPN 114
L + D+ARD+ +EMK G P +Y + I +C + +A L +EMV +G+ PN
Sbjct: 252 LCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPN 311
Query: 115 ATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWN 174
T+N+ V + + +L M+ G +PN + L++ + A +L+
Sbjct: 312 VVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFV 371
Query: 175 DMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
M KG ++ VL + C K+ EA K + M++ G +P
Sbjct: 372 SMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRP 415
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 107/232 (46%), Gaps = 6/232 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G+ PD + N L++ C +V + ++ + PD+++YT++I GL + +
Sbjct: 122 MRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHR 181
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEK------GLSPN 114
KA + M++ GC P+A Y ++ C + A L EM+ P
Sbjct: 182 ISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPV 241
Query: 115 ATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWN 174
+Y++ + +L+ M G P S L+ K E A +L+N
Sbjct: 242 VISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFN 301
Query: 175 DMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+MV +G ++ +VL D+LC GK++EA+ MI++G P+ +++ +
Sbjct: 302 EMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSL 353
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 65/112 (58%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
++ +K DI +NCLID CK ++E A+++ EK+ E++ PDV++Y +I GQ
Sbjct: 478 LKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQ 537
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLS 112
KA + ++M++ GC PD Y IR + +K+L L+ MV++ +S
Sbjct: 538 VVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVS 589
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 99/235 (42%), Gaps = 8/235 (3%)
Query: 21 CKDRQVE--KAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYP 78
CK + +A++ M + +P + S+T ++ GL + + + +M+ G P
Sbjct: 70 CKTGNITATQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISP 129
Query: 79 DAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLY 138
D N + C R+ + +M ++ +G P+ TY + + + + L+
Sbjct: 130 DCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLF 189
Query: 139 CRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK------GFGSYILVSDVLF 192
RM GC PN + L+K R + IAL+L +M+ F ++ ++
Sbjct: 190 TRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIII 249
Query: 193 DLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMA 247
D LC + EA F EM +G P+ +S+ + K E + L N+M
Sbjct: 250 DALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMV 304
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 99/223 (44%), Gaps = 8/223 (3%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P + S+ L+ K + + + + +MR ISPD + ++ L V + + V
Sbjct: 94 PPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAV 153
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
+ + G PD Y I+ C+ R+ A+ L M + G +PNA TY +
Sbjct: 154 MAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCR 213
Query: 128 SNDLRSSWNLYCRMMGTGCL------PNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEKG 180
+ ++ + L+ M+ L P S ++ LCK + + E A L+ +M +G
Sbjct: 214 TGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDE-ARDLFEEMKVQG 272
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ L C GK EA++ F EM+ +G +P+ V+F
Sbjct: 273 MTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTF 315
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 92/214 (42%), Gaps = 35/214 (16%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGL---GL 57
M G +PD++ Y LI+ YCK +VE+A K+ M PDV +Y +++ GL G
Sbjct: 373 MPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGK 432
Query: 58 VGQPDKARDVLK--------------------------------EMKEYGCYPDAAAYNA 85
VG K V+K ++K Y D +N
Sbjct: 433 VGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNC 492
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
I C A +L A L +++ ++ L P+ TYN+ F + + L+ +M G
Sbjct: 493 LIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNG 552
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
C P+ + L++ +K+E ++L + MV++
Sbjct: 553 CTPDKITYATLIRGFFESKKLEKVVELLHMMVQR 586
>gi|147821100|emb|CAN70963.1| hypothetical protein VITISV_038268 [Vitis vinifera]
Length = 844
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 113/229 (49%), Gaps = 1/229 (0%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
++ G+ P++ + N L+ CK ++ A +++E+M P+V++YT+I+GG G
Sbjct: 233 KKFGIVPNVFTCNILVKALCKKNDIDAAIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDM 292
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
AR V E+ + G PD Y + YC R DA +MDEM E + PN TY +
Sbjct: 293 VGARRVFGEILDRGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVI 352
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
+ NL M+ +P++ C ++ + + KVE+A +LW +++K
Sbjct: 353 IEAYCKEKKSGEVLNLLDDMLEKKYIPSSALCCRVIDMLCEEGKVEVACELWKKLLKKNC 412
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALM 230
++ L LC GK+ EA K F E EKG PS +++ + A M
Sbjct: 413 TPDNAITSTLIHWLCKEGKVWEARKLFDEF-EKGSIPSTLTYNALIAGM 460
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 112/241 (46%), Gaps = 2/241 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M MG P++V+Y ++ Y + A ++ ++ D PD +YT ++ G G+
Sbjct: 267 MPAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGEILDRGWVPDPTTYTILMDGYCKKGR 326
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A V+ EM+E P+ Y I YC K+ + L+D+M+EK P++
Sbjct: 327 FMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYIPSSALCCR 386
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + L+ +++ C P+ L+ ++ KV A +L+ D EKG
Sbjct: 387 VIDMLCEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLCKEGKVWEARKLF-DEFEKG 445
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
L + L +C+ G+L EA + + M+EKG P+ ++ IK ++ N +E +
Sbjct: 446 SIPSTLTYNALIAGMCEGGELPEAARLWDNMVEKGCVPNAFTYNMLIKGFCKVGNAREGI 505
Query: 240 Q 240
+
Sbjct: 506 R 506
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 71/134 (52%), Gaps = 1/134 (0%)
Query: 16 LIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYG 75
+ID+ C++ +VE A ++ +K+ ++ +PD +++I L G+ +AR + E E G
Sbjct: 387 VIDMLCEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLCKEGKVWEARKLFDEF-EKG 445
Query: 76 CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSW 135
P YNA I C L +A+ L D MVEKG PNA TYN+ + F + R
Sbjct: 446 SIPSTLTYNALIAGMCEGGELPEAARLWDNMVEKGCVPNAFTYNMLIKGFCKVGNAREGI 505
Query: 136 NLYCRMMGTGCLPN 149
+ M+ GCLPN
Sbjct: 506 RVMEEMLDNGCLPN 519
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 1/113 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD + LI CK+ +V +A K+ ++ I P ++Y ++I G+ G+ +A +
Sbjct: 414 PDNAITSTLIHWLCKEGKVWEARKLFDEFEKGSI-PSTLTYNALIAGMCEGGELPEAARL 472
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
M E GC P+A YN I+ +C R+ +M+EM++ G PN TY +
Sbjct: 473 WDNMVEKGCVPNAFTYNMLIKGFCKVGNAREGIRVMEEMLDNGCLPNKATYAI 525
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 43/81 (53%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E G P ++YN LI C+ ++ +A ++ + M ++ P+ +Y +I G VG
Sbjct: 443 EKGSIPSTLTYNALIAGMCEGGELPEAARLWDNMVEKGCVPNAFTYNMLIKGFCKVGNAR 502
Query: 63 KARDVLKEMKEYGCYPDAAAY 83
+ V++EM + GC P+ A Y
Sbjct: 503 EGIRVMEEMLDNGCLPNKATY 523
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 37/181 (20%), Positives = 78/181 (43%), Gaps = 3/181 (1%)
Query: 41 ISPDVISYTSIIGGLGLVGQPDKARDVLKE-MKEYGCYPDAAAYNAAIRNYCIAKRLRDA 99
+ P V S+ +++ L + D + K K++G P+ N ++ C + A
Sbjct: 201 LQPSVRSFNTLLNTLVQNKRFDLVHLMFKNCRKKFGIVPNVFTCNILVKALCKKNDIDAA 260
Query: 100 SGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPN-TQSCMFLVK 158
+++EM G PN TY + D+ + ++ ++ G +P+ T + +
Sbjct: 261 IRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGEILDRGWVPDPTTYTILMDG 320
Query: 159 LCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
CK+ ++ A+++ ++M E + V+ + C K E +M+EK + P
Sbjct: 321 YCKKGRFMD-AVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYIP 379
Query: 219 S 219
S
Sbjct: 380 S 380
>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
Length = 795
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 115/215 (53%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G++PD+VSY+ +I + CK +VE A +M E +SP++IS+TS+I GL +G+
Sbjct: 401 MRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGE 460
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
K ++ EM G +PDA N + N C R+ +A D ++ G+ P+ +YN
Sbjct: 461 WKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNT 520
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + S RM+ G P++ + L+ + +VE AL L+ +M K
Sbjct: 521 LIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKD 580
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
+ S+++ L G++V A + +++M+++G
Sbjct: 581 VKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRG 615
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 113/223 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ PD+V+YN LID CK + ++KA I++ M D+ + PD +Y +I G +GQ
Sbjct: 226 MMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQ 285
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A +LK+M G PD Y+ I+ YC R +A + D MV KG PN+T Y++
Sbjct: 286 LEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHI 345
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L +L M+ G ++ L+ + V+ A+ + +M + G
Sbjct: 346 LLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNG 405
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + +LC G++ +A F +M+ +G P+ +SF
Sbjct: 406 LRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISF 448
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 105/226 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV PD +YN +I YC Q+E+A ++++KM + PDV++Y+ +I +G+
Sbjct: 261 MFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGR 320
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR V M G P++ Y+ + Y L D L+D M+ G+ +N+
Sbjct: 321 CAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNI 380
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + + M G P+ S ++ + + +VE A+ +N MV +G
Sbjct: 381 LICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEG 440
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
I+ L LC +G+ + E+ EMI +G P + I
Sbjct: 441 LSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTI 486
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 105/218 (48%), Gaps = 3/218 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDE---DISPDVISYTSIIGGLGL 57
M E+G PD+ SYN LI C +++ ++A +++ M + + SP+V+SY ++I G
Sbjct: 153 MPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTVIDGFFK 212
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
G+ DKA + EM G PD YN+ I C A+ + A ++ M +KG+ P+ T
Sbjct: 213 EGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRT 272
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
YN+ R + L + L +M G+G P+ + L++ + + A +++ MV
Sbjct: 273 YNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMV 332
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
KG + +L G L++ MI G
Sbjct: 333 RKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDG 370
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 89/183 (48%), Gaps = 6/183 (3%)
Query: 46 ISYTSIIGGLGLVGQPDKARD-VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMD 104
++ +I GL + D A D V + M E G PD +YNA I+ C+ K+ ++A L+
Sbjct: 127 VTLNQLIKGLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLI 186
Query: 105 EMVEKG---LSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LC 160
M G SPN +YN F+ ++ ++ L+ MMG G P+ + L+ LC
Sbjct: 187 HMTADGGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLC 246
Query: 161 KRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQ 220
K Q ++ A+ + M +KG +++ C +G+L EA + +M G +P
Sbjct: 247 KAQ-AMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDV 305
Query: 221 VSF 223
V++
Sbjct: 306 VTY 308
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 105/259 (40%), Gaps = 37/259 (14%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGG------ 54
M G++PD+V+Y+ LI YCK + +A + + M + P+ Y ++ G
Sbjct: 296 MSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGA 355
Query: 55 -------LGLV----------------------GQPDKARDVLKEMKEYGCYPDAAAYNA 85
L L+ G DKA EM++ G PD +Y+
Sbjct: 356 LIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYST 415
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
I C R+ DA ++MV +GLSPN ++ + + L M+ G
Sbjct: 416 VIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRG 475
Query: 146 CLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEA 204
P+ ++ LCK VE A ++ ++ G ++ + L D C +GK+ E+
Sbjct: 476 IHPDAIFMNTIMDNLCKEGRVVE-AQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDES 534
Query: 205 EKSFLEMIEKGHKPSQVSF 223
K M+ G +P ++
Sbjct: 535 IKQLDRMVSIGLRPDSWTY 553
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 67/134 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G + I +YN ++ C++ V++A ++ E +R ++ DV +++ +I L VG+
Sbjct: 611 MVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGR 670
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A+ + M G PD Y+ I+++ L ++ L M + G + ++ N+
Sbjct: 671 IDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAADSHMLNI 730
Query: 121 FFRVFYWSNDLRSS 134
R D+R +
Sbjct: 731 IVRRLLEKGDVRRA 744
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 85/216 (39%), Gaps = 35/216 (16%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G++PD +YN L++ Y K+ +VE A + +M +D+ I+ ++ GL G+
Sbjct: 541 MVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGR 600
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAI----RNYCIAKRLR------------------- 97
AR++ +M + G YN + N C+ + LR
Sbjct: 601 IVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSI 660
Query: 98 ------------DASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
+A L MV +G P+ TY+L + L S NL+ M G
Sbjct: 661 VINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNG 720
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
C ++ +V+ + V A + EK F
Sbjct: 721 CAADSHMLNIIVRRLLEKGDVRRAGTYLTKIDEKNF 756
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 55/116 (47%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
D+ +++ +I+ K ++++A + M PDVI+Y+ +I G +++ ++
Sbjct: 654 DVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLF 713
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
M++ GC D+ N +R +R A + ++ EK S A+T L +
Sbjct: 714 LSMEKNGCAADSHMLNIIVRRLLEKGDVRRAGTYLTKIDEKNFSLEASTAALLIPI 769
>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
Length = 948
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 106/209 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV P+I YNCLID YCK + +A + ++ +I PDV +Y+ +I GL V +
Sbjct: 324 MASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDR 383
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A +L+EMK+ G P+A YN I YC + A + +M EKG+ PN T++
Sbjct: 384 MEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFST 443
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + ++ LY M+ G LP+ + L+ + + A +L +M E G
Sbjct: 444 LIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAG 503
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFL 209
+ L D LC G++ +A K FL
Sbjct: 504 LHPNVFTLSCLIDGLCKDGRISDAIKLFL 532
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 119/241 (49%), Gaps = 1/241 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G+ P++ +YN ++D YCK V+KA ++ ++M + + P+V+++ +I GL +
Sbjct: 254 MRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDE 313
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
AR L +M +G P+ YN I YC A L +A L E+ + + P+ TY++
Sbjct: 314 MVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSI 373
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + + L M G LPN + L+ ++ +E A+++ + M EKG
Sbjct: 374 LIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKG 433
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
I+ L D C GK+ A + EM+ KG P V++ I + N +EA
Sbjct: 434 IEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAF 493
Query: 240 Q 240
+
Sbjct: 494 R 494
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 127/297 (42%), Gaps = 37/297 (12%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P++V+Y LID C+ KA+++ ++M ++ I P V+ YT +I GL +
Sbjct: 184 MVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESR 243
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + + M+ G P+ YN + YC ++ A L EM+ GL PN T+ +
Sbjct: 244 ISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGI 303
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPN--TQSCMF----------------------- 155
++++ S+ M G +PN +C+
Sbjct: 304 LIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHE 363
Query: 156 ----------LVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
L+K +++E A L +M +KGF + + L D C G + +A
Sbjct: 364 ILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAI 423
Query: 206 KSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFGPSMIPKREEYLA 262
+ +M EKG +P+ ++F + A K EA L +M + G ++P Y A
Sbjct: 424 EVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKG--LLPDVVAYTA 478
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 90/203 (44%), Gaps = 2/203 (0%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
+M V P + + N ++D K + + +K+ M SP+V++Y ++I G G
Sbjct: 151 KMDVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFL 210
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
KA + EM E +P Y IR C R+ +A + M G+ PN TYN
Sbjct: 211 KAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMM 270
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGF 181
+ ++ + LY M+G G LPN + L+ LCK E V A + DM G
Sbjct: 271 DGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVS-ARKFLIDMASFGV 329
Query: 182 GSYILVSDVLFDLLCDMGKLVEA 204
I V + L D C G L EA
Sbjct: 330 VPNIFVYNCLIDGYCKAGNLSEA 352
Score = 44.3 bits (103), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 89/230 (38%), Gaps = 28/230 (12%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G +P I LI +Y V A+ M DE S ++IS+TS+I +P+KA
Sbjct: 661 GFEPIIFLQTSLISMYSATGNVADAHN----MFDEIPSKNLISWTSVISAYVDNQRPNKA 716
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ ++M+ PD A+ L + + +GL + N
Sbjct: 717 LQLFRQMQMDDVQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNN----- 771
Query: 125 FYWSNDLRSSWNLY--CRMMGTG-----CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
S N+Y C +GT LPN + M ++ C VE Q + M
Sbjct: 772 --------SLINMYSKCGEIGTARRFSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMK 823
Query: 178 EK-GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
E I + DLLC G L EA + L+M +P+ V +R +
Sbjct: 824 EDYSLRPRISHFGCMVDLLCRAGLLTEAYEFILKMPV---RPNAVVWRTL 870
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK-- 63
++P I + C++D+ C+ + +AY+ + KM + P+ + + +++G L G DK
Sbjct: 828 LRPRISHFGCMVDLLCRAGLLTEAYEFILKM---PVRPNAVVWRTLLGACSLQGMWDKKM 884
Query: 64 -ARDVLKEMKEYGC 76
R+ +K+ ++ GC
Sbjct: 885 LVRNQIKQRRDPGC 898
>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
Length = 702
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 115/219 (52%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD V++ LI C++ +A++I+E R+ DV SY+S+I G+ A +V
Sbjct: 402 PDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEV 461
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
K M + GC P++ YNA I +C ++ DA + EM G P TYN
Sbjct: 462 YKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCK 521
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ + + +L M+ G P+ ++ L++ R +KV++AL++W+++++ G ++V
Sbjct: 522 AEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMV 581
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++L LC GK+ EA +LEM EK P+ V++ +
Sbjct: 582 HNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTL 620
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 97/202 (48%), Gaps = 1/202 (0%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ P++ +YN ++ C V++A + +R ++PD ++Y++++ GL Q D A
Sbjct: 154 IAPNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNAL 213
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMV-EKGLSPNATTYNLFFRV 124
D+L EM YG DA YNA + A + +++V + G SPN TY +
Sbjct: 214 DLLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDG 273
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + ++ RMM +T + L+ R V+ A ++++DMV+ G
Sbjct: 274 LCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLD 333
Query: 185 ILVSDVLFDLLCDMGKLVEAEK 206
+ V + L C++G+ EA K
Sbjct: 334 VSVYNSLIKGFCEVGRTGEAWK 355
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 99/219 (45%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G KP+ YN LI+ +C+ ++ A KI +M P +I+Y ++I GL + +A
Sbjct: 469 GCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEA 528
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ KEM E G PD Y + IR C K++ A + DE+++ GL + +N+
Sbjct: 529 SSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHG 588
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + ++ +Y M C PN + L+ ++ A LW +++ G
Sbjct: 589 LCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPD 648
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I+ + LC + E E++ G P+ +++
Sbjct: 649 IVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVITW 687
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 2/202 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P I++YN LID CK + ++A + ++M + PD+ +Y S+I GL +
Sbjct: 500 MTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKK 559
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A + E+ + G D +N I C A ++ +A + EM EK SPN TYN
Sbjct: 560 VDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNT 619
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
FY + + +L+ ++ G P+ + +K LC E L L N+++
Sbjct: 620 LMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVL-LLNEVLAT 678
Query: 180 GFGSYILVSDVLFDLLCDMGKL 201
G ++ +L + G +
Sbjct: 679 GIMPTVITWSILVRAVIKYGPI 700
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 110/288 (38%), Gaps = 70/288 (24%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+R+ G P++ +Y ++D CK + ++A ++ +M + D ++Y +I GL G
Sbjct: 255 VRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGD 314
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDA--------------------- 99
D A V +M + G D + YN+ I+ +C R +A
Sbjct: 315 VDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIRQITTYNIM 374
Query: 100 ------SGLMDEMVE--------KGLSPNATTYNLFF----------RVFYWSNDLRSSW 135
SG++ E E SP+ T+ R F D R+S
Sbjct: 375 TKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSG 434
Query: 136 ------------NLYCR-------------MMGTGCLPNTQSCMFLVKLCKRQEKVEIAL 170
N +C+ M+ GC PN+ L+ R K+ A+
Sbjct: 435 EELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAI 494
Query: 171 QLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
+++ +M G I+ + L D LC K EA EM+E+G KP
Sbjct: 495 KIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKP 542
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 102/227 (44%), Gaps = 7/227 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+R GV PD V+Y+ L+ K Q++ A ++++M + + D + Y +++ G G
Sbjct: 184 LRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYNALLSGCFRTGM 243
Query: 61 PDKARDVLKEM-KEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+KA V +++ ++ G P+ A Y + C R ++A + M+ + TY
Sbjct: 244 FEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYG 303
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVE 178
+ S D+ S+ +Y M+ G + + L+K C+ E A + W+
Sbjct: 304 ILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGE-AWKFWDSTGF 362
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGH--KPSQVSF 223
G I +++ L D G + EA + L+ +E P +V+F
Sbjct: 363 SGI-RQITTYNIMTKGLLDSGMVSEATE-LLKQLENDASCSPDKVTF 407
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 77/204 (37%), Gaps = 41/204 (20%)
Query: 61 PDKARDVLKEMKEY-GCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVE----KGLSPNA 115
PD A +++ GC P ++N + + A+R DA + + ++PN
Sbjct: 99 PDAALAAFRDLPSLLGCNPGVRSHNTLLDAFVRARRYSDADAFFASLSHGAFGRRIAPNL 158
Query: 116 TTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPN--TQSCMF------------------ 155
TYN+ R D+ + +L+ + G P+ T S +
Sbjct: 159 QTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDE 218
Query: 156 ---------------LVKLCKRQEKVEIALQLWNDMV-EKGFGSYILVSDVLFDLLCDMG 199
L+ C R E A+++W +V + G + V+ D LC +G
Sbjct: 219 MPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLG 278
Query: 200 KLVEAEKSFLEMIEKGHKPSQVSF 223
+ EA + + M+ H+ V++
Sbjct: 279 RFKEAGEVWSRMMANNHQADTVTY 302
>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 747
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 121/226 (53%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G+ P+ +Y L+D + + + +AY+++ +M D SP V++Y ++I G + G+
Sbjct: 371 MRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGK 430
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A VL++MKE G PD +Y+ + +C + + +A + EMVEKG+ P+ TY+
Sbjct: 431 MEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSS 490
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ F + + +LY M+ G P+ + L+ + +E ALQL N+MVEKG
Sbjct: 491 LIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKG 550
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ VL + L + EA++ L++ + PS V++ +
Sbjct: 551 VLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTL 596
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 118/236 (50%), Gaps = 3/236 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ P +++Y LI CK + +A + +++MR + P+ +YT+++ G G
Sbjct: 336 MLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGY 395
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A VL+EM + G P YNA I +C+ ++ DA ++++M EKGLSP+ +Y+
Sbjct: 396 MNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYST 455
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F S D+ + + M+ G P+T + L++ Q + + A L+ +M+ G
Sbjct: 456 VLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVG 515
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQ 236
L + C G L +A + EM+EKG P V++ L+ NKQ
Sbjct: 516 LPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTY---SVLINGLNKQ 568
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 108/226 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P++V+YN LID YCK R+++ +K++ M + + P++ISY +I GL G+
Sbjct: 231 METKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGR 290
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ VL EM G D YN I+ YC A + EM+ GL+P+ TY
Sbjct: 291 MKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTS 350
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ + +M G PN ++ LV ++ + A ++ +M + G
Sbjct: 351 LIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNG 410
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
F ++ + L + C GK+ +A +M EKG P VS+ +
Sbjct: 411 FSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTV 456
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 108/223 (48%), Gaps = 20/223 (8%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E G+ PD+VSY+ ++ +C+ V++A ++ +M ++ I PD I+Y+S+I G +
Sbjct: 441 MKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRR 500
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A D+ +EM G PD Y A I YC+ L A L +EMVEKG+ P+ TY++
Sbjct: 501 TKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSV 560
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ R + L ++ +P+ + L++ C E + + KG
Sbjct: 561 LINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLI------KG 614
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
F C G + EA++ F M+ K HKP ++
Sbjct: 615 F--------------CMKGMMTEADQVFESMLGKNHKPDGTAY 643
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 99/223 (44%), Gaps = 1/223 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKD-RQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
G P ++SYN ++D + R + A + ++M + +SP+V +Y +I G G D
Sbjct: 164 GFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDV 223
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
A + +M+ GC P+ YN I YC +++ D L+ M KGL PN +YN+
Sbjct: 224 ALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVIN 283
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
++ + M G + + L+K ++ AL + +M+ G
Sbjct: 284 GLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTP 343
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ L +C G + A + +M +G P++ ++ +
Sbjct: 344 SVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTL 386
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 108/228 (47%), Gaps = 28/228 (12%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G+ PD +Y LI+ YC + +EKA ++ +M ++ + PDV++Y+ +I GL +
Sbjct: 511 MLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSR 570
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRN---------------YCIAKRLRDASGLMDE 105
+A+ +L ++ P Y+ I N +C+ + +A + +
Sbjct: 571 TREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFES 630
Query: 106 MVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEK 165
M+ K P+ T YN+ + D+R ++ LY M+ +G L +T + + LVK ++ K
Sbjct: 631 MLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGK 690
Query: 166 VE-----IALQLWNDMVEKGFGSYILVS--------DVLFDLLCDMGK 200
V I L + + + + +LV DV+ D+L +M K
Sbjct: 691 VNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAK 738
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 88/180 (48%), Gaps = 2/180 (1%)
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKR-LRDASGLMDEMVEKGLSPNATTYNL 120
DKA ++ + +G P +YNA + +KR + A + EM+E +SPN TYN+
Sbjct: 151 DKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNI 210
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
R F ++ ++ + L+ +M GCLPN + L+ + K++ +L M KG
Sbjct: 211 LIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKG 270
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
++ +V+ + LC G++ E EM +G+ +V++ IK + N +AL
Sbjct: 271 LEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQAL 330
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 99/233 (42%), Gaps = 4/233 (1%)
Query: 13 YNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSII-GGLGLVGQPDKARDVLKEM 71
++ ++ Y + ++KA IV + P V+SY +++ + A +V KEM
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196
Query: 72 KEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDL 131
E P+ YN IR +C A + A L D+M KG PN TYN + +
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKI 256
Query: 132 RSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYILVSDV 190
+ L M G PN S ++ LC+ E++ L +M +G+ + +
Sbjct: 257 DDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVL-TEMNRRGYSLDEVTYNT 315
Query: 191 LFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNL 242
L C G +A EM+ G PS +++ I ++ + N A++ L
Sbjct: 316 LIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFL 368
>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
Length = 688
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 123/252 (48%), Gaps = 12/252 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E + PD+V+YN LI+ + K+ + +A ++ ++M I P+ I+Y S+I G +
Sbjct: 316 MLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDR 375
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A D+ M GC PD + I YC AKR+ D L+ EM +GL N TYN
Sbjct: 376 LDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNT 435
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE-- 178
F DL ++ +L +M+ +G P+ +C L+ K++ AL+++ M +
Sbjct: 436 LIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 495
Query: 179 ---------KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKA 228
G +L ++L L + GK +EAE+ + EM +G P +++ I
Sbjct: 496 MDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 555
Query: 229 LMELANKQEALQ 240
L + + EA Q
Sbjct: 556 LCKQSRLDEATQ 567
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 119/247 (48%), Gaps = 1/247 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRD-EDISPDVISYTSIIGGLGLVG 59
M E G++P ++Y ++D CK A ++ KM + I P+V+ Y++II L G
Sbjct: 210 MMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDG 269
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ A+++ EM+E G +PD YN+ I +C + R DA L+ EM+E+ +SP+ TYN
Sbjct: 270 RHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYN 329
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
F + LY M+ G +PNT + ++ +Q++++ A ++ M K
Sbjct: 330 ALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATK 389
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
G + L D C ++ + + EM +G + V++ + L A
Sbjct: 390 GCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAA 449
Query: 240 QNLSNKM 246
+LS +M
Sbjct: 450 LDLSQQM 456
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 108/217 (49%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ P++V Y+ +ID CKD + A + +M+++ I PD+ +Y S+I G G+ A
Sbjct: 251 IIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAE 310
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+L+EM E PD YNA I + + +A+ L DEM+ +G+ PN TYN F
Sbjct: 311 QLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGF 370
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ L ++ +++ M GC P+ + L+ ++++ ++L ++M +G +
Sbjct: 371 CKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANT 430
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
+ + L C +G L A +MI G P V+
Sbjct: 431 VTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVT 467
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 104/228 (45%), Gaps = 3/228 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++ DI S+N LI +C ++ A K+ + PDV+++T+++ GL + +
Sbjct: 105 MERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDR 164
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A D +M E C P+ + + C R+ +A L+D M+E GL P TY
Sbjct: 165 VSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGT 224
Query: 121 FFRVFYWSNDLRSSWNLYCRMMG-TGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVE 178
D S+ NL +M + +PN ++ LCK + A L+ +M E
Sbjct: 225 IVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSD-AQNLFTEMQE 283
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
KG + + + C G+ +AE+ EM+E+ P V++ +
Sbjct: 284 KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNAL 331
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 86/172 (50%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV+PD+++YN LI + + +A ++ E+M I PD I+Y+S+I GL + D+A
Sbjct: 506 GVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ M P+ +N I YC A R+ D L EM +G+ +A Y
Sbjct: 566 TQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYG 625
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDM 176
F ++ + +++ M+ +G P+T + ++ +E++E A+ + D+
Sbjct: 626 FRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDL 677
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 91/191 (47%), Gaps = 11/191 (5%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMR----DEDIS-------PDVISYT 49
M GV PDIV+ N L+D C + +++ A ++ + M+ D D S PDV++Y
Sbjct: 456 MISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYN 515
Query: 50 SIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEK 109
+I GL G+ +A ++ +EM G PD Y++ I C RL +A+ + M K
Sbjct: 516 ILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSK 575
Query: 110 GLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIA 169
SPN T+N + + + L+C M G + + + L+ ++ + A
Sbjct: 576 SFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGA 635
Query: 170 LQLWNDMVEKG 180
L ++ +M+ G
Sbjct: 636 LDIFQEMISSG 646
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/272 (19%), Positives = 104/272 (38%), Gaps = 46/272 (16%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD+ ++ LID YC ++++ +++ +M + + ++Y ++I G LVG
Sbjct: 386 MATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGD 445
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDA--------------------- 99
+ A D+ ++M G PD N + C +L+DA
Sbjct: 446 LNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFN 505
Query: 100 -------------------------SGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSS 134
L +EM +G+ P+ TY+ + L +
Sbjct: 506 GVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565
Query: 135 WNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDL 194
++ M PN + L+ + +V+ L+L+ +M +G + ++ L
Sbjct: 566 TQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYG 625
Query: 195 LCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+G + A F EMI G P ++ R +
Sbjct: 626 FRKVGNINGALDIFQEMISSGVYPDTITIRNM 657
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 62/130 (47%), Gaps = 1/130 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ PD ++Y+ +ID CK ++++A ++ M + SP+V+++ ++I G G+
Sbjct: 537 MPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGR 596
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D ++ EM G DA Y I + + A + EM+ G+ P+ T
Sbjct: 597 VDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRN 656
Query: 121 FFRVFYWSND 130
F WS +
Sbjct: 657 MLTGF-WSKE 665
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 93/224 (41%), Gaps = 1/224 (0%)
Query: 24 RQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAY 83
+ +E A + M P V+ + ++G + + +PD + ++M+ D ++
Sbjct: 58 KGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSF 117
Query: 84 NAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMG 143
N I+ +C +L A ++ + GL P+ T+ + + + + + +M
Sbjct: 118 NILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFE 177
Query: 144 TGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVE 203
T C PN + L+ R+ ++ A+ L + M+E G + + D +C G V
Sbjct: 178 TTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVS 237
Query: 204 AEKSFLEMIEKGH-KPSQVSFRRIKALMELANKQEALQNLSNKM 246
A +M E H P+ V + I + + QNL +M
Sbjct: 238 ALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEM 281
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 54/106 (50%), Gaps = 3/106 (2%)
Query: 4 MGVK---PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MG K P++V++N LI+ YCK +V+ ++ +M I D I Y ++I G VG
Sbjct: 572 MGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGN 631
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEM 106
+ A D+ +EM G YPD + + + L A +++++
Sbjct: 632 INGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDL 677
>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Vitis vinifera]
Length = 665
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 106/209 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV P+I YNCLID YCK + +A + ++ +I PDV +Y+ +I GL V +
Sbjct: 324 MASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDR 383
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A +L+EMK+ G P+A YN I YC + A + +M EKG+ PN T++
Sbjct: 384 MEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFST 443
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + ++ LY M+ G LP+ + L+ + + A +L +M E G
Sbjct: 444 LIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAG 503
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFL 209
+ L D LC G++ +A K FL
Sbjct: 504 LHPNVFTLSCLIDGLCKDGRISDAIKLFL 532
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 119/241 (49%), Gaps = 1/241 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G+ P++ +YN ++D YCK V+KA ++ ++M + + P+V+++ +I GL +
Sbjct: 254 MRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDE 313
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
AR L +M +G P+ YN I YC A L +A L E+ + + P+ TY++
Sbjct: 314 MVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSI 373
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + + L M G LPN + L+ ++ +E A+++ + M EKG
Sbjct: 374 LIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKG 433
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
I+ L D C GK+ A + EM+ KG P V++ I + N +EA
Sbjct: 434 IEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAF 493
Query: 240 Q 240
+
Sbjct: 494 R 494
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 127/297 (42%), Gaps = 37/297 (12%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P++V+Y LID C+ KA+++ ++M ++ I P V+ YT +I GL +
Sbjct: 184 MVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESR 243
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + + M+ G P+ YN + YC ++ A L EM+ GL PN T+ +
Sbjct: 244 ISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGI 303
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPN--TQSCMF----------------------- 155
++++ S+ M G +PN +C+
Sbjct: 304 LIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHE 363
Query: 156 ----------LVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
L+K +++E A L +M +KGF + + L D C G + +A
Sbjct: 364 ILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAI 423
Query: 206 KSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFGPSMIPKREEYLA 262
+ +M EKG +P+ ++F + A K EA L +M + G ++P Y A
Sbjct: 424 EVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKG--LLPDVVAYTA 478
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 90/203 (44%), Gaps = 2/203 (0%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
+M V P + + N ++D K + + +K+ M SP+V++Y ++I G G
Sbjct: 151 KMDVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFL 210
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
KA + EM E +P Y IR C R+ +A + M G+ PN TYN
Sbjct: 211 KAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMM 270
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGF 181
+ ++ + LY M+G G LPN + L+ LCK E V A + DM G
Sbjct: 271 DGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVS-ARKFLIDMASFGV 329
Query: 182 GSYILVSDVLFDLLCDMGKLVEA 204
I V + L D C G L EA
Sbjct: 330 VPNIFVYNCLIDGYCKAGNLSEA 352
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 93/230 (40%), Gaps = 48/230 (20%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G++P+I++++ LID YCK ++E A + +M + + PDV++YT++I G G
Sbjct: 429 MTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGN 488
Query: 61 PDKARDVLKEMKEYG--------------------------------------------- 75
+A + KEM+E G
Sbjct: 489 TKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELD 548
Query: 76 ---CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLR 132
C P+ Y A I+ C R+ AS +M GL P+ T + + + + LR
Sbjct: 549 RSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLR 608
Query: 133 SSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
L ++ G +PN+ L K + ++ AL+ D+ G G
Sbjct: 609 DVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALRCSEDLSGIGIG 658
>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12775, mitochondrial; Flags: Precursor
gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
multiple PPR PF|01535 repeats. EST gb|AI999079 comes
from this gene [Arabidopsis thaliana]
gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 644
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 116/224 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E +K D V Y+ +ID CKD ++ A+ + +M + D+I+Y ++IGG G+
Sbjct: 254 MEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGR 313
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D +L++M + P+ ++ I ++ +LR+A L+ EM+++G++PN TYN
Sbjct: 314 WDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNS 373
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F N L + + M+ GC P+ + L+ + +++ L+L+ +M +G
Sbjct: 374 LIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRG 433
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
+ + + L C GKL A+K F EM+ + +P VS++
Sbjct: 434 VIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYK 477
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 123/247 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G +P+ V+Y +++V CK Q A +++ KM + +I D + Y+ II GL G
Sbjct: 219 MVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGS 278
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A ++ EM+ G D YN I +C A R D + L+ +M+++ +SPN T+++
Sbjct: 279 LDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSV 338
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F LR + L MM G PNT + L+ ++ ++E A+Q+ + M+ KG
Sbjct: 339 LIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKG 398
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
I+ ++L + C ++ + + F EM +G + V++ + + K E +
Sbjct: 399 CDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAK 458
Query: 241 NLSNKMA 247
L +M
Sbjct: 459 KLFQEMV 465
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 108/204 (52%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G K DI++YN LI +C + + K++ M ISP+V++++ +I G+ +A
Sbjct: 293 GFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREA 352
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+LKEM + G P+ YN+ I +C RL +A ++D M+ KG P+ T+N+
Sbjct: 353 DQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILING 412
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ +N + L+ M G + NT + LV+ + K+E+A +L+ +MV +
Sbjct: 413 YCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPD 472
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSF 208
I+ +L D LCD G+L +A + F
Sbjct: 473 IVSYKILLDGLCDNGELEKALEIF 496
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 119/254 (46%), Gaps = 37/254 (14%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ P++V+++ LID + K+ ++ +A +++++M I+P+ I+Y S+I G + ++A
Sbjct: 329 ISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAI 388
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
++ M GC PD +N I YC A R+ D L EM +G+ N TYN + F
Sbjct: 389 QMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGF 448
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDM----VEKG 180
S L + L+ M+ P+ S L+ LC E +E AL+++ + +E
Sbjct: 449 CQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGE-LEKALEIFGKIEKSKMELD 507
Query: 181 FGSYILV---------SDVLFDLLCDM----------------------GKLVEAEKSFL 209
G Y+++ D +DL C + L +A+ F
Sbjct: 508 IGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFR 567
Query: 210 EMIEKGHKPSQVSF 223
+M E+GH P ++++
Sbjct: 568 KMTEEGHAPDELTY 581
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 104/224 (46%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ I + + +I+ +C+ R++ A+ + K+ PD + + +++ GL L +
Sbjct: 114 MESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECR 173
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A +++ M E G P N + C+ ++ DA L+D MVE G PN TY
Sbjct: 174 VSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGP 233
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGC-LPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
V S + L +M L + + + LCK ++ A L+N+M K
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCK-DGSLDNAFNLFNEMEIK 292
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
GF + I+ + L C+ G+ + K +MI++ P+ V+F
Sbjct: 293 GFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTF 336
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 68/140 (48%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
V+PDIVSY L+D C + ++EKA +I K+ + D+ Y II G+ + D A
Sbjct: 469 VRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAW 528
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
D+ + G DA AYN I C L A L +M E+G +P+ TYN+ R
Sbjct: 529 DLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAH 588
Query: 126 YWSNDLRSSWNLYCRMMGTG 145
+D ++ L M +G
Sbjct: 589 LGDDDATTAAELIEEMKSSG 608
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 103/214 (48%), Gaps = 7/214 (3%)
Query: 2 REM---GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLV 58
REM GV + V+YN L+ +C+ ++E A K+ ++M + PD++SY ++ GL
Sbjct: 427 REMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDN 486
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
G+ +KA ++ ++++ D Y I C A ++ DA L + KG+ +A Y
Sbjct: 487 GELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAY 546
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
N+ + L + L+ +M G P+ + L++ + A +L +M
Sbjct: 547 NIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKS 606
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMI 212
GF + + ++ ++L E +KSFL+M+
Sbjct: 607 SGFPADVSTVKMVINMLSSG----ELDKSFLDML 636
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 94/219 (42%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P ++ +N L K +Q E + ++M + I+ + + + +I + A
Sbjct: 86 PTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFST 145
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
+ ++ + G PD +N + C+ R+ +A L+D MVE G P T N
Sbjct: 146 MGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCL 205
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ + + L RM+ TG PN + ++ + + + +A++L M E+ +
Sbjct: 206 NGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ D LC G L A F EM KG K +++ +
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTL 304
>gi|115455503|ref|NP_001051352.1| Os03g0761300 [Oryza sativa Japonica Group]
gi|14488357|gb|AAK63924.1|AC084282_5 unknown protein [Oryza sativa Japonica Group]
gi|108711214|gb|ABF99009.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549823|dbj|BAF13266.1| Os03g0761300 [Oryza sativa Japonica Group]
gi|125545804|gb|EAY91943.1| hypothetical protein OsI_13630 [Oryza sativa Indica Group]
gi|125588003|gb|EAZ28667.1| hypothetical protein OsJ_12678 [Oryza sativa Japonica Group]
Length = 484
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 129/249 (51%), Gaps = 1/249 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G +PDIV+Y ++D CK +VE+A ++V+ M P Y+ ++ G+ +
Sbjct: 230 MLDAGCEPDIVTYGIMVDSLCKTGRVEEAVRVVQDMTSRGCQPTTYIYSVLVHTYGVEMR 289
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A +M++ G PD YNA + +C AK+ +A ++++M G++ N+ T+N+
Sbjct: 290 IEDAVATFLDMEKDGIVPDIVVYNALVSAFCKAKKFENAFRVLNDMEGHGITTNSRTWNI 349
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++ ++ RM+ C P+ + ++K+ +KVE+AL++W M K
Sbjct: 350 ILNHLISLGRDDEAYKVFRRMIKC-CQPDCDTYTMMIKMFCENDKVEMALKVWKYMRLKQ 408
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
F + VL + LCD ++ +A +MIEKG +P +F +++ L+ +++ L
Sbjct: 409 FLPSMHTFSVLINGLCDKREVSQACVLLEDMIEKGIRPPGSTFGKLRQLLLKEGRKDVLD 468
Query: 241 NLSNKMALF 249
L KM +
Sbjct: 469 FLVEKMNIL 477
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 101/213 (47%), Gaps = 1/213 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV P++ ++N L+ CK + V KA +I +KM + SPD +Y+ ++ G G
Sbjct: 161 MEKYGVVPNLAAFNSLLGALCKSKNVRKAQEIFDKM-NSRFSPDAKTYSILLEGWGRAPN 219
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
K R+V EM + GC PD Y + + C R+ +A ++ +M +G P Y++
Sbjct: 220 LPKMREVYSEMLDAGCEPDIVTYGIMVDSLCKTGRVEEAVRVVQDMTSRGCQPTTYIYSV 279
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + + M G +P+ LV + +K E A ++ NDM G
Sbjct: 280 LVHTYGVEMRIEDAVATFLDMEKDGIVPDIVVYNALVSAFCKAKKFENAFRVLNDMEGHG 339
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIE 213
+ +++ + L +G+ EA K F MI+
Sbjct: 340 ITTNSRTWNIILNHLISLGRDDEAYKVFRRMIK 372
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 115/247 (46%), Gaps = 4/247 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G + SY+ ++ K RQ + + +V MR E + +V ++ I+ + D+A
Sbjct: 96 GCAHTVRSYHTVVASLAKIRQYQLMWDVVAVMRREG-AVNVETFGIIMRKYARAQKVDEA 154
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
M++YG P+ AA+N+ + C +K +R A + D+M + SP+A TY++
Sbjct: 155 VYTFNVMEKYGVVPNLAAFNSLLGALCKSKNVRKAQEIFDKMNSR-FSPDAKTYSILLEG 213
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEKGFGS 183
+ + +L +Y M+ GC P+ + +V LCK +VE A+++ DM +G
Sbjct: 214 WGRAPNLPKMREVYSEMLDAGCEPDIVTYGIMVDSLCK-TGRVEEAVRVVQDMTSRGCQP 272
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLS 243
+ VL ++ +A +FL+M + G P V + + + A K E +
Sbjct: 273 TTYIYSVLVHTYGVEMRIEDAVATFLDMEKDGIVPDIVVYNALVSAFCKAKKFENAFRVL 332
Query: 244 NKMALFG 250
N M G
Sbjct: 333 NDMEGHG 339
>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
Length = 1636
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 99/176 (56%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR GV PD+V+Y+ +I +CKD ++ A+K++E+M++ PDV++Y+++I GL G
Sbjct: 536 MRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGT 595
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA DV +EM GC P+ YN I C ++ A+ +++ M ++ +P++ TY
Sbjct: 596 VDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTC 655
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDM 176
++ L +W + M GCLP+ + L++ ++ +E+ QL +M
Sbjct: 656 LINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEM 711
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 116/227 (51%), Gaps = 1/227 (0%)
Query: 1 MREMG-VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVG 59
M E G PD+ +Y+ ++D K +V+ A ++VE M + SP+V++Y+S++ GL G
Sbjct: 938 MEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAG 997
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ D+A +L+ M GC P+ YN I +C R+ +A L++EMV+ G PN TY
Sbjct: 998 KLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYT 1057
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ F + L M+ G +PN + L+ + ++++VE A QL + M++K
Sbjct: 1058 VLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQK 1117
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G ++ + + LC K+ E +M+ P V+F I
Sbjct: 1118 GCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTI 1164
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 108/223 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G P++ SYN ++ +CK +VE A ++E+M PDV+SYT++I GL + Q
Sbjct: 256 MVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQ 315
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A V+ +M + GC P+ Y + +C L A L+ +M E+G PNA TYN
Sbjct: 316 VDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNN 375
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
VF ND+ + + M+ TGC P+ + ++ + K+ A L M+ +G
Sbjct: 376 IMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRG 435
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ L D LC + A++ I P V++
Sbjct: 436 CRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAY 478
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 117/227 (51%), Gaps = 2/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P++V+Y+ L+ CK ++++A ++++M SP++++Y +II G +G+
Sbjct: 974 MVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGR 1033
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A +L+EM + GC P+ Y + +C + DA GL++ MVEKG PN TYN
Sbjct: 1034 IDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNS 1093
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEK 179
+F +++ + L M+ GC+PN S + LCK KV + L M+
Sbjct: 1094 LLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCK-ATKVHEGVLLLEQMLSN 1152
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
I+ + + D +C ++ A + F + E G P+ V++ +
Sbjct: 1153 NCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSL 1199
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 117/236 (49%), Gaps = 1/236 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDE-DISPDVISYTSIIGGLGLVG 59
M GV +++ +N +I C R+++ A ++ ++M + PDV +Y++I+ L G
Sbjct: 903 MPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVKSG 962
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ D A ++++M GC P+ Y++ + C A +L +A+ L+ M G SPN TYN
Sbjct: 963 KVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYN 1022
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ +++L M+ GC PN + L+ + K E A+ L MVEK
Sbjct: 1023 TIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEK 1082
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANK 235
G+ + + L D+ C ++ A + MI+KG P+ VS+ + A + A K
Sbjct: 1083 GYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATK 1138
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 107/219 (48%), Gaps = 2/219 (0%)
Query: 2 REMG--VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVG 59
REM PD V+YN +I+ K +++ A +++E+M D +P+V SY +++ G
Sbjct: 220 REMSKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKAN 279
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ + A +L++M GC PD +Y I C ++ +A +MD+M+++G PN TY
Sbjct: 280 RVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYG 339
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
F DL + L +M G PN + ++ + R+ +E A Q+ M++
Sbjct: 340 TLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQT 399
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
G + + C GKL EA +MI +G +P
Sbjct: 400 GCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRP 438
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 109/223 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G +PD+ + LID CK ++ A +++ D +PDV++Y+ +I L +
Sbjct: 431 MIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKR 490
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A L M + CYPD YN+ + C ++R+ DA L D M G+ P+ TY++
Sbjct: 491 LPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSI 550
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F N+L S++ + RM C+P+ + L+ + V+ A ++ +M+ G
Sbjct: 551 VIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCG 610
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + L D LC + K+ +A + M ++ P +++
Sbjct: 611 CAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITY 653
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 109/226 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD+VSY +I+ CK QV++A ++++KM P+VI+Y +++ G VG
Sbjct: 291 MVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGD 350
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A +++++M E G P+A YN + +C + A ++ M++ G P+A Y+
Sbjct: 351 LDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYST 410
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + LR + +L +M+ GC P+ L+ + ++ A +L +
Sbjct: 411 IISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMD 470
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ +L LC +L EAE M++ P V++ +
Sbjct: 471 CAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSV 516
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 119/242 (49%), Gaps = 1/242 (0%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
D V+Y+ LI + + ++ AY++ ++M + + + SI+ GL GQ A
Sbjct: 160 DTVTYSTLISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHF 219
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
+EM + C PD+ YN I + RL DA L++EMV+ G +PN +YN F +
Sbjct: 220 REMSKT-CPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKA 278
Query: 129 NDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVS 188
N + ++ L +M+ GC P+ S ++ + ++V+ A ++ + M+++G ++
Sbjct: 279 NRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITY 338
Query: 189 DVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMAL 248
L D C +G L A + +M E+G++P+ +++ I + N E + M
Sbjct: 339 GTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQ 398
Query: 249 FG 250
G
Sbjct: 399 TG 400
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 113/225 (50%), Gaps = 3/225 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G +P++V+Y L+D +CK + E A +VE M ++ P++ +Y S++ +
Sbjct: 1044 MVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDE 1103
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A +L M + GC P+ +YN I C A ++ + L+++M+ P+ T+N
Sbjct: 1104 VERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNT 1163
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+ + ++ L+ + +GC PN + LV LCK + + + A L +M K
Sbjct: 1164 IIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSR-RFDQAEYLLREMTRK 1222
Query: 180 -GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G I+ + + D LC ++ A K FL+M+ G P V++
Sbjct: 1223 QGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTY 1267
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 123/278 (44%), Gaps = 36/278 (12%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G +P+ ++YN ++ V+C+ +E+A+++++ M PD I+Y++II G G+
Sbjct: 361 MTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGK 420
Query: 61 PDKARDVLKEMKEYGC-----------------------------------YPDAAAYNA 85
+A D+L++M GC PD AY+
Sbjct: 421 LREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSI 480
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
I C AKRL +A +D MV+ P+ TYN S + ++ L+ RM G
Sbjct: 481 LIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAG 540
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
+P+ + ++ + ++ A ++ M E ++ L + LC G + +A
Sbjct: 541 VMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAF 600
Query: 206 KSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNL 242
F EM+ G P+ V++ I L ++ ++A + L
Sbjct: 601 DVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEML 638
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 118/252 (46%), Gaps = 2/252 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKA-YKIVEKMRDEDISPDVISYTSIIGGLGLVG 59
++E G P++V+YN L+ CK R+ ++A Y + E R + SPD+I+Y ++I GL
Sbjct: 1184 IQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSK 1243
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ D+A + +M G PD Y+ I + C + + +A+ +++ M++ G P A TY
Sbjct: 1244 RVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYG 1303
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
F + +L + + ++ G P+ + + ++ ++ A +L M+
Sbjct: 1304 TLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRA 1363
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEA 238
G + + L CD +A F M + G +P ++ + L++ + ++
Sbjct: 1364 GLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDL 1423
Query: 239 LQNLSNKMALFG 250
L +S M G
Sbjct: 1424 LAEVSKSMVDTG 1435
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 110/225 (48%), Gaps = 4/225 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G +P++++Y L+D +C+ ++ A ++V KM + P+ I+Y +I+
Sbjct: 326 MIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRND 385
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A VL+ M + GC PDA Y+ I +C A +LR+A L+++M+ +G P+ +
Sbjct: 386 MERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLST 445
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWND-MVE 178
+ + S+ L +G C P+ + L+ LCK + E + W D MV+
Sbjct: 446 LIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEA--ESWLDVMVK 503
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + + D LC ++ +A F M G P V++
Sbjct: 504 NRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTY 548
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 114/235 (48%), Gaps = 7/235 (2%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
R+ G PDI++YN +ID CK ++V++AYK+ +M + ++PD ++Y+ +I L
Sbjct: 1221 RKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFM 1280
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
D+A +VL+ M + G P A Y I +C L A ++ ++ KG P+ T+++F
Sbjct: 1281 DEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIF 1340
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
LR + L M+ G +P+T + L+K E A+ L+ M + G
Sbjct: 1341 IDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGC 1400
Query: 182 ----GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMEL 232
+Y + L D L E KS M++ G K + +++A +E+
Sbjct: 1401 EPDNATYTTLVGHLVDKKSYKDLLAEVSKS---MVDTGFKLNHELSSKLEASIEV 1452
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 108/246 (43%), Gaps = 1/246 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+K + ++ C Q A +M + PD ++Y ++I GL +
Sbjct: 187 MNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREM-SKTCPPDSVTYNTMINGLSKSDR 245
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A +L+EM + G P+ +YN + +C A R+ +A L+++MV +G P+ +Y
Sbjct: 246 LDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTT 305
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + + +M+ GC PN + LV R ++ A++L M E+G
Sbjct: 306 VINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERG 365
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ + + + + C + A + MI+ G P +++ I + A K
Sbjct: 366 YRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAH 425
Query: 241 NLSNKM 246
+L +M
Sbjct: 426 DLLEQM 431
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 101/221 (45%), Gaps = 5/221 (2%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G D + NCL+ + ++ + A ++ SP++ ++T +I GL G A
Sbjct: 839 GYNHDTYTCNCLLQALLRLKRPKDALQVYRNKLC--CSPNMFTFTILIHGLCRAGDIGTA 896
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKG-LSPNATTYNLFFR 123
++LKEM +G + +N I+ C A++L A L EM E G P+ TY+
Sbjct: 897 YELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVD 956
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
S + + L M+ GC PN + L LCK K++ A L M G
Sbjct: 957 SLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCK-AGKLDEATALLQRMTRSGCS 1015
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I+ + + D C +G++ EA EM++ G +P+ V++
Sbjct: 1016 PNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTY 1056
Score = 37.4 bits (85), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 61/142 (42%), Gaps = 1/142 (0%)
Query: 112 SPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQ 171
SPN T+ + + D+ +++ L M G N ++K K++ AL+
Sbjct: 874 SPNMFTFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALE 933
Query: 172 LWNDMVEKG-FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALM 230
L+ +M E G + + D L GK+ +A + +M+ KG P+ V++ + +
Sbjct: 934 LFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGL 993
Query: 231 ELANKQEALQNLSNKMALFGPS 252
A K + L +M G S
Sbjct: 994 CKAGKLDEATALLQRMTRSGCS 1015
>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 576
Score = 116 bits (291), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 121/236 (51%), Gaps = 1/236 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD+V+ LID CK+ V +A K+ +MR++ PDV++Y +I G G+ D+A
Sbjct: 214 PDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRF 273
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
LK++ YGC PD ++N +R+ C R DA L+ M+ KG P+ T+N+
Sbjct: 274 LKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQ 333
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
L + N+ M G PN++S L++ + ++ A++ MV +G I+
Sbjct: 334 KGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVT 393
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNL 242
++L LC GK+ +A ++ KG PS +S+ I L+++ + A++ L
Sbjct: 394 YNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELL 449
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 108/223 (48%), Gaps = 2/223 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G KPD+V+YN LI +CK ++++A + ++K+ PDVIS+ I+ L G+
Sbjct: 242 MRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGR 301
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +L M GC P +N I C L A +++ M + G +PN+ ++N
Sbjct: 302 WMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNP 361
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ F + + M+ GC P+ + + L LCK KV+ A+ + + + K
Sbjct: 362 LIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCK-DGKVDDAVVILSQLSSK 420
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
G ++ + + D L +GK A + EM KG KP ++
Sbjct: 421 GCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLIT 463
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 103/205 (50%), Gaps = 3/205 (1%)
Query: 22 KDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAA 81
++ ++E+ + +E M ++ SPDVI+ T++I +G+ A ++ ++E G D
Sbjct: 91 RNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVT 150
Query: 82 AYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRM 141
+YN I YC + + +A ++D M G+SPNA TY+ L+ + + R
Sbjct: 151 SYNVLISGYCKSGEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQ 207
Query: 142 MGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKL 201
+ + C P+ +C L+ ++ V A++L+N+M KG ++ +VL C G+L
Sbjct: 208 LQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRL 267
Query: 202 VEAEKSFLEMIEKGHKPSQVSFRRI 226
EA + ++ G +P +S I
Sbjct: 268 DEAIRFLKKLPSYGCQPDVISHNMI 292
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 106/246 (43%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P +V++N LI+ C+ + KA ++E M +P+ S+ +I G
Sbjct: 312 MLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKG 371
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + L+ M GCYPD YN + C ++ DA ++ ++ KG SP+ +YN
Sbjct: 372 IDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNT 431
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L M G P+ +C +V R+ KV A++ ++ +
Sbjct: 432 VIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFA 491
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ + + LC + A +M+ KG KP++ ++ + + E
Sbjct: 492 IRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYEGLAEDAS 551
Query: 241 NLSNKM 246
LSN++
Sbjct: 552 KLSNEL 557
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 89/194 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PDIV+YN L+ CKD +V+ A I+ ++ + SP +ISY ++I GL VG+
Sbjct: 382 MVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGK 441
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A ++L+EM G PD + + ++R+A + + PNA YN
Sbjct: 442 AELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNS 501
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
S + + M+ GC P + L+K + E A +L N++ +G
Sbjct: 502 IITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYEGLAEDASKLSNELYSRG 561
Query: 181 FGSYILVSDVLFDL 194
LV V ++
Sbjct: 562 LVKRSLVEKVSLEV 575
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 104/222 (46%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G +PD++S+N ++ C + A K++ M + P V+++ +I L G KA
Sbjct: 281 GCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKA 340
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+VL+ M ++G P++ ++N I+ +C K + A ++ MV +G P+ TYN+
Sbjct: 341 LNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTA 400
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + + ++ GC P+ S ++ + K E+A++L +M KG
Sbjct: 401 LCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPD 460
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ + L GK+ EA K F + +P+ + I
Sbjct: 461 LITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSI 502
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 109/259 (42%), Gaps = 40/259 (15%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD+++ LI +CK + + A +I+ + + DV SY +I G G+
Sbjct: 105 MTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVTSYNVLISGYCKSGE 164
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDA--------------------- 99
++A VL M G P+AA Y+A + + C +L+ A
Sbjct: 165 IEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTV 221
Query: 100 --------SG------LMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
SG L +EM KG P+ TYN+ + F L + ++ G
Sbjct: 222 LIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYG 281
Query: 146 CLPNTQSC-MFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEA 204
C P+ S M L LC ++ A++L M+ KG ++ ++L + LC G L +A
Sbjct: 282 CQPDVISHNMILRSLCSGGRWMD-AMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKA 340
Query: 205 EKSFLEMIEKGHKPSQVSF 223
M + GH P+ SF
Sbjct: 341 LNVLEMMPKHGHTPNSRSF 359
>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
Length = 636
Score = 116 bits (291), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 114/223 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MRE G++PD SY+ L+ CK +++ A K+ E + D PDV++Y+++I GL G+
Sbjct: 138 MRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGR 197
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + ++M+E C PD + A + C RL++A +++ M ++ +PN TY+
Sbjct: 198 LDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSS 257
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ +R + ++ RM+ G PN + L+ V+ AL L +M G
Sbjct: 258 LIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATG 317
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I+ + L D LC G+ EA + F +M K P +++
Sbjct: 318 CLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITY 360
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 115/217 (52%), Gaps = 2/217 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD+V+Y+ LI CK ++++A K+ EKMR+ PDV+++T+++ GL + +A+ V
Sbjct: 180 PDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQV 239
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L+ M++ C P+ Y++ I C ++RDA + M+ +G+ PN TYN F
Sbjct: 240 LETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCM 299
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+N + S+ L M TGCLP+ + L+ LCK E A +L+ DM K ++
Sbjct: 300 TNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPE-ANRLFGDMKAKFCNPDVI 358
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
L C + ++ A F +M+++ P V+F
Sbjct: 359 TYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTF 395
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 112/223 (50%), Gaps = 2/223 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G++P++V+YN LI +C V+ A ++E+M PD+I+Y ++I GL G+ +A
Sbjct: 282 GIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEA 341
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ +MK C PD Y+ I +C +R+ A L D+M+++ + P+ T++
Sbjct: 342 NRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEG 401
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGS 183
+ + + + L M+ + C P+ + LV CK VE A ++ M ++G
Sbjct: 402 YCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVE-ARRVLKRMAKRGCQP 460
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ L D C GK A K EM+ G +P+ +++R +
Sbjct: 461 NVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSL 503
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 119/259 (45%), Gaps = 2/259 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + P++++Y+ LID CK QV A ++ ++M I P+V++Y S+I G +
Sbjct: 243 MEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNG 302
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A +++EM GC PD YN I C R +A+ L +M K +P+ TY+
Sbjct: 303 VDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSC 362
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + + L+ M+ LP+ + LV+ V+ A +L +MV
Sbjct: 363 LIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASD 422
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ L D C +G++VEA + M ++G +P+ V++ + A K
Sbjct: 423 CSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAY 482
Query: 241 NLSNKMALFG--PSMIPKR 257
L +M G P++I R
Sbjct: 483 KLLEEMVGNGVQPNVITYR 501
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 124/252 (49%), Gaps = 10/252 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + V PD+V+++ L++ YC V+ A +++E+M D SPDV +YTS++ G VG+
Sbjct: 383 MLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGR 442
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR VLK M + GC P+ Y A I +C A + A L++EMV G+ PN TY
Sbjct: 443 MVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRS 502
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-----LCKRQEKVEIALQLWND 175
F + DL + + R+ N ++ MF + LC R ++ AL+L
Sbjct: 503 LIGGFCGTGDLEEARKMLERLERD---ENCKADMFAYRVMMDGLC-RTGRMSAALELLEA 558
Query: 176 MVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEM-IEKGHKPSQVSFRRIKALMELAN 234
+ + G + L LC +L +A + EM + + +P+ ++ + +
Sbjct: 559 IKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREG 618
Query: 235 KQEALQNLSNKM 246
+ E L++++
Sbjct: 619 RHEEANALADEL 630
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 139/291 (47%), Gaps = 37/291 (12%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G P+ +YN LI+ +CK +V +AY ++++M++ ++P+V++Y+++I G +
Sbjct: 33 MKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTK 92
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY-- 118
D A + ++M E GC P+ YN + C + +A L+DEM E+GL P+ +Y
Sbjct: 93 VDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDT 152
Query: 119 -----------NLFFRVFYWSND----------------------LRSSWNLYCRMMGTG 145
++ +VF +++ L + L+ +M
Sbjct: 153 LMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENS 212
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
C P+ + L+ + ++++ A Q+ M ++ ++ L D LC G++ +A+
Sbjct: 213 CEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQ 272
Query: 206 KSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFG--PSMI 254
+ F MI +G +P+ V++ + + N ++ L +M G P +I
Sbjct: 273 EVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDII 323
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 112/238 (47%), Gaps = 5/238 (2%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
M + +++++ +ID CK ++ +A KM+ + P+ +Y +I G V + +
Sbjct: 1 MECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHR 60
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
A +LKEMKE G P+ Y+ I +C ++ A L +MVE G PN TYN
Sbjct: 61 AYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLS 120
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSC-MFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
+ + ++ L M G P+ S + LCK K+++AL+++ D
Sbjct: 121 GLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCK-TGKIDMALKVFEDNSNGDCP 179
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
++ L LC G+L EA K F +M E +P V+F ALM+ K + LQ
Sbjct: 180 PDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTF---TALMDGLCKGDRLQ 234
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 63/140 (45%), Gaps = 37/140 (26%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKM-RDEDISPDVISYTSIIGGLGLVGQPDK 63
GV+P++++Y LI +C +E+A K++E++ RDE+ D+ +Y ++ GL G+
Sbjct: 492 GVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSA 551
Query: 64 ARDVLKEMKEYGC------------------------------------YPDAAAYNAAI 87
A ++L+ +K+ G P+A AY A I
Sbjct: 552 ALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVI 611
Query: 88 RNYCIAKRLRDASGLMDEMV 107
+ R +A+ L DE++
Sbjct: 612 QELAREGRHEEANALADELL 631
>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Vitis vinifera]
Length = 644
Score = 116 bits (291), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 125/271 (46%), Gaps = 36/271 (13%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ P+++S+N +I CK V++A ++ +M + PDV +Y +++ GL + D+A
Sbjct: 168 ISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAV 227
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+L EM+ GC+P + +N I C + + L+D M KG PN TYN
Sbjct: 228 LLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGL 287
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCK----------------------- 161
L + +L RM+ + C+PN + L+ L K
Sbjct: 288 CLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANE 347
Query: 162 -----------RQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLE 210
++EK E A+ LW MVEKG I+V L D LC GKL EA++ E
Sbjct: 348 YAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCE 407
Query: 211 MIEKGHKPSQVSFRR-IKALMELANKQEALQ 240
M+ KG P+ ++ IK + N Q+A++
Sbjct: 408 MVNKGCTPNAFTYSSLIKGFFKTGNSQKAIR 438
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 114/242 (47%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G P+ V+YN +I+ C +++KA ++++M P+ ++Y ++I GL G+
Sbjct: 272 GCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDG 331
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+L ++E G + + AY+ I ++ +A GL +MVEKG PN Y+
Sbjct: 332 VHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDG 391
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
L + + C M+ GC PN + L+K + + A+++W +M +
Sbjct: 392 LCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPN 451
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSN 244
+ VL LC+ GKL EA + M+ +G +P V++ + + A E L N
Sbjct: 452 EICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFN 511
Query: 245 KM 246
+M
Sbjct: 512 EM 513
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 104/218 (47%), Gaps = 2/218 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P+ V+Y LI+ K + ++ + + + +Y+++I GL + ++A +
Sbjct: 310 PNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGL 369
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
K+M E GC P+ Y+A I C +L +A ++ EMV KG +PNA TY+ + F+
Sbjct: 370 WKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFK 429
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ + + + ++ M C+PN L+ K+ A+ +W M+ +G ++
Sbjct: 430 TGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVA 489
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMI--EKGHKPSQVSF 223
+ LC+ G + K F EM+ E +P V++
Sbjct: 490 YSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTY 527
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 108/224 (48%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+ E G + +Y+ LI K+ + E+A + +KM ++ P+++ Y+++I GL G+
Sbjct: 338 LEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGK 397
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A+++L EM GC P+A Y++ I+ + + A + EM + PN Y++
Sbjct: 398 LDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSV 457
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV--E 178
LR + ++ M+G G P+ + ++ VE+ L+L+N+M+ E
Sbjct: 458 LIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQE 517
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
++ ++L LC + A M+++G P ++
Sbjct: 518 SDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLIT 561
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 113/264 (42%), Gaps = 53/264 (20%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G +P+IV Y+ LID C++ ++++A +I+ +M ++ +P+ +Y+S+I G G
Sbjct: 373 MVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGN 432
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGL--------- 111
KA V KEM + C P+ Y+ I C +LR+A + M+ +GL
Sbjct: 433 SQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSS 492
Query: 112 ----------------------------SPNATTYNLFFRVFYWSNDLRSSWNLYCRMMG 143
P+ TYN+ R N + + +L M+
Sbjct: 493 MIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLD 552
Query: 144 TGCLPNTQSC-MFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLV 202
GC P+ +C +FL L ++ + + +++V + L ++V
Sbjct: 553 RGCNPDLITCNIFLNALREKLNPPQDGREFLDELVVR---------------LHKRQRIV 597
Query: 203 EAEKSFLEMIEKGHKPSQVSFRRI 226
A K M++K P+ ++ RI
Sbjct: 598 GAAKIIEVMLQKFLPPNASTWERI 621
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 109/247 (44%), Gaps = 2/247 (0%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVE--KMRDEDISPDVISYTSIIGGLGLVGQ 60
E + + S+N +++V ++ +A + E +ISP+V+S+ +I + +G
Sbjct: 128 EFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGL 187
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A +V +EM C PD Y + C R+ +A L+DEM +G P++ T+N+
Sbjct: 188 VDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNV 247
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
D+ L M GC+PN + ++ + K++ A+ L + MV
Sbjct: 248 LINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASK 307
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ L + L G+ V+ + E+GH ++ ++ + + + K E
Sbjct: 308 CVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAM 367
Query: 241 NLSNKMA 247
L KM
Sbjct: 368 GLWKKMV 374
>gi|302754000|ref|XP_002960424.1| hypothetical protein SELMODRAFT_74408 [Selaginella moellendorffii]
gi|300171363|gb|EFJ37963.1| hypothetical protein SELMODRAFT_74408 [Selaginella moellendorffii]
Length = 321
Score = 116 bits (291), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 109/223 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR MGV P IV+YN LID +CK+ ++ +A +I+++M P+ ++Y + + GL G+
Sbjct: 71 MRSMGVSPTIVTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHGLCKYGK 130
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A + + M E D Y I C A +L +A L+DEM G P YN
Sbjct: 131 VDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCYNA 190
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + L+ RM G+G LP+ + +V R +++ AL L M G
Sbjct: 191 ILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQQMKSAG 250
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + L D L G++ EA + EMI +G P+ ++
Sbjct: 251 LAPREVIYNTLIDALNRAGRVSEAYRLLQEMISRGLSPNSRTY 293
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 102/255 (40%), Gaps = 37/255 (14%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G P +V++ L+D CK ++ A+++VE M + P+ + + I+ L G+
Sbjct: 1 MAEKGCIPTVVTFGILVDGLCKANRLTDAFELVEVMAERGCFPNALVFNGIMDALCKEGR 60
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++ M+ G P YN I +C ++L A ++ EM +G PN TYN
Sbjct: 61 SAEAYGYIETMRSMGVSPTIVTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYN- 119
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
FL LCK KV+ AL L+ M EK
Sbjct: 120 ---------------------------------TFLHGLCK-YGKVDDALALFRAMTEKK 145
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ L D LC GKL EA EM G P + I + + ++
Sbjct: 146 IRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCYNAILSWLCKGSRINEAH 205
Query: 241 NLSNKMALFGPSMIP 255
L +M G ++P
Sbjct: 206 KLFKRMT--GSGILP 218
>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Vitis vinifera]
Length = 656
Score = 116 bits (291), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 111/223 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G KP++VSYN +I Y +E A +I++ MR + I PD +Y S+I G+ G+
Sbjct: 275 MEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGR 334
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A + +M E G P+A YN I YC L A DEMV+KG+ P+ +TYNL
Sbjct: 335 LEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNL 394
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + ++ M G +P+ + L+ R + A L N+M+ KG
Sbjct: 395 LVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKG 454
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ L +L ++ EA+ F +++++G P + F
Sbjct: 455 IEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMF 497
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 122/246 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + + + ++N +++V CK+ +++KA + + M P+V+SY +II G G
Sbjct: 240 MFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGN 299
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ AR +L M+ G PD+ Y + I C RL +ASGL D+MVE GL PNA TYN
Sbjct: 300 IEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNT 359
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ DL +++ M+ G +P+ + LV + ++ A + +M +KG
Sbjct: 360 LIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKG 419
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ ++L + G +A EM+ KG +P+ V++ + ++ N+ +
Sbjct: 420 IIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEAD 479
Query: 241 NLSNKM 246
+L K+
Sbjct: 480 DLFEKI 485
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 109/226 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E+G+ P+ V+YN LID YC +E+A+ ++M + I P V +Y ++ L + G+
Sbjct: 345 MVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGR 404
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A D++KEM++ G PDA YN I Y + A L +EM+ KG+ P TY
Sbjct: 405 MGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTS 464
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
V N ++ + +L+ +++ G P+ +V VE A L +M K
Sbjct: 465 LIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKS 524
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + L C GK+ EA EM +G KP +S+ +
Sbjct: 525 VPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTL 570
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 107/223 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G+ PD ++YN LI+ Y + +KA+ + +M + I P ++YTS+I L +
Sbjct: 415 MRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNR 474
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A D+ +++ + G PD +NA + +C + A L+ EM K + P+ T+N
Sbjct: 475 MKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNT 534
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + L M G P+ S L+ R+ ++ A ++ ++M+ G
Sbjct: 535 LMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIG 594
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
F +L + L LC + AE+ EM+ KG P ++
Sbjct: 595 FNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTY 637
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 85/156 (54%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
+ GV PD++ +N ++D +C + VE+A+ ++++M + + PD +++ +++ G G+ +
Sbjct: 487 DQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVE 546
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
+AR +L EMK G PD +YN I Y ++DA + DEM+ G +P TYN
Sbjct: 547 EARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALI 606
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK 158
+ + + + L M+ G P+ + + L++
Sbjct: 607 KCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIE 642
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 116/247 (46%), Gaps = 2/247 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E G+ P I + N ++ ++ K ++E A+ + +M IS V ++ ++ L G+
Sbjct: 205 MKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGK 264
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KAR+ + M+ G P+ +YN I Y + A ++D M KG+ P++ TY
Sbjct: 265 LKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGS 324
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
L + L+ +M+ G +PN + L+ + +E A ++MV+KG
Sbjct: 325 LISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKG 384
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEAL 239
+ ++L L G++ EA+ EM +KG P +++ I N ++A
Sbjct: 385 IMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAF 444
Query: 240 QNLSNKM 246
+L N+M
Sbjct: 445 -DLHNEM 450
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 50/87 (57%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G+KPD +SYN LI Y + ++ A+++ ++M +P +++Y ++I L +
Sbjct: 555 MKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQE 614
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAI 87
D A ++LKEM G PD + Y + I
Sbjct: 615 GDLAEELLKEMVNKGISPDDSTYLSLI 641
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 66/167 (39%)
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ D+A MKE G P N + + R+ A L EM +S T+N
Sbjct: 194 RADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFN 253
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ V L+ + M G G PN S ++ + +E A ++ + M K
Sbjct: 254 IMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVK 313
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G L +C G+L EA F +M+E G P+ V++ +
Sbjct: 314 GIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTL 360
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 57/114 (50%), Gaps = 2/114 (1%)
Query: 114 NATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLW 173
++ ++L RV ++ + M G +P ++C ++ L + ++E+A L+
Sbjct: 178 SSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLY 237
Query: 174 NDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEK-GHKPSQVSFRRI 226
+M S + +++ ++LC GKL +A + F+ +E G KP+ VS+ I
Sbjct: 238 AEMFRLRISSTVYTFNIMVNVLCKEGKLKKA-REFIGFMEGLGFKPNVVSYNTI 290
>gi|302767746|ref|XP_002967293.1| hypothetical protein SELMODRAFT_87828 [Selaginella moellendorffii]
gi|300165284|gb|EFJ31892.1| hypothetical protein SELMODRAFT_87828 [Selaginella moellendorffii]
Length = 321
Score = 116 bits (291), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 109/223 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR MGV P IV+YN LID +CK+ ++ +A +I+++M P+ ++Y + + GL G+
Sbjct: 71 MRSMGVSPTIVTYNLLIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHGLCKYGK 130
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A + + M E D Y I C A +L +A L+DEM G P YN
Sbjct: 131 VDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCYNA 190
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + L+ RM G+G LP+ + +V R +++ AL L M G
Sbjct: 191 ILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQQMKSAG 250
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + L D L G++ EA + EMI +G P+ ++
Sbjct: 251 LAPREVIYNTLIDALNRAGRVSEAYRLLQEMISRGLSPNSRTY 293
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 102/255 (40%), Gaps = 37/255 (14%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G P +V++ L+D CK ++ A+++VE M + P+ + + I+ L G+
Sbjct: 1 MAEKGCIPTVVTFGILVDGLCKANRLTDAFELVEVMGERGCFPNALVFNGIMDALCKEGR 60
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++ M+ G P YN I +C ++L A ++ EM +G PN TYN
Sbjct: 61 SAEAYGFIETMRSMGVSPTIVTYNLLIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYN- 119
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
FL LCK KV+ AL L+ M EK
Sbjct: 120 ---------------------------------TFLHGLCK-YGKVDDALALFRAMTEKK 145
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ L D LC GKL EA EM G P + I + + ++
Sbjct: 146 IRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCYNAILSWLCKGSRINEAH 205
Query: 241 NLSNKMALFGPSMIP 255
L +M G ++P
Sbjct: 206 KLFKRMT--GSGILP 218
>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 111/223 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G KP++VSYN +I Y +E A +I++ MR + I PD +Y S+I G+ G+
Sbjct: 253 MEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGR 312
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A + +M E G P+A YN I YC L A DEMV+KG+ P+ +TYNL
Sbjct: 313 LEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNL 372
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + ++ M G +P+ + L+ R + A L N+M+ KG
Sbjct: 373 LVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKG 432
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ L +L ++ EA+ F +++++G P + F
Sbjct: 433 IEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMF 475
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 122/246 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + + + ++N +++V CK+ +++KA + + M P+V+SY +II G G
Sbjct: 218 MFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGN 277
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ AR +L M+ G PD+ Y + I C RL +ASGL D+MVE GL PNA TYN
Sbjct: 278 IEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNT 337
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ DL +++ M+ G +P+ + LV + ++ A + +M +KG
Sbjct: 338 LIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKG 397
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ ++L + G +A EM+ KG +P+ V++ + ++ N+ +
Sbjct: 398 IIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEAD 457
Query: 241 NLSNKM 246
+L K+
Sbjct: 458 DLFEKI 463
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 109/226 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E+G+ P+ V+YN LID YC +E+A+ ++M + I P V +Y ++ L + G+
Sbjct: 323 MVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGR 382
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A D++KEM++ G PDA YN I Y + A L +EM+ KG+ P TY
Sbjct: 383 MGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTS 442
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
V N ++ + +L+ +++ G P+ +V VE A L +M K
Sbjct: 443 LIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKS 502
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + L C GK+ EA EM +G KP +S+ +
Sbjct: 503 VPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTL 548
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 107/223 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G+ PD ++YN LI+ Y + +KA+ + +M + I P ++YTS+I L +
Sbjct: 393 MRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNR 452
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A D+ +++ + G PD +NA + +C + A L+ EM K + P+ T+N
Sbjct: 453 MKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNT 512
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + L M G P+ S L+ R+ ++ A ++ ++M+ G
Sbjct: 513 LMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIG 572
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
F +L + L LC + AE+ EM+ KG P ++
Sbjct: 573 FNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTY 615
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 85/156 (54%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
+ GV PD++ +N ++D +C + VE+A+ ++++M + + PD +++ +++ G G+ +
Sbjct: 465 DQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVE 524
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
+AR +L EMK G PD +YN I Y ++DA + DEM+ G +P TYN
Sbjct: 525 EARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALI 584
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK 158
+ + + + L M+ G P+ + + L++
Sbjct: 585 KCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIE 620
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 116/247 (46%), Gaps = 2/247 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E G+ P I + N ++ ++ K ++E A+ + +M IS V ++ ++ L G+
Sbjct: 183 MKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGK 242
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KAR+ + M+ G P+ +YN I Y + A ++D M KG+ P++ TY
Sbjct: 243 LKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGS 302
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
L + L+ +M+ G +PN + L+ + +E A ++MV+KG
Sbjct: 303 LISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKG 362
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEAL 239
+ ++L L G++ EA+ EM +KG P +++ I N ++A
Sbjct: 363 IMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAF 422
Query: 240 QNLSNKM 246
+L N+M
Sbjct: 423 -DLHNEM 428
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 50/87 (57%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G+KPD +SYN LI Y + ++ A+++ ++M +P +++Y ++I L +
Sbjct: 533 MKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQE 592
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAI 87
D A ++LKEM G PD + Y + I
Sbjct: 593 GDLAEELLKEMVNKGISPDDSTYLSLI 619
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 66/167 (39%)
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ D+A MKE G P N + + R+ A L EM +S T+N
Sbjct: 172 RADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFN 231
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ V L+ + M G G PN S ++ + +E A ++ + M K
Sbjct: 232 IMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVK 291
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G L +C G+L EA F +M+E G P+ V++ +
Sbjct: 292 GIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTL 338
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 57/114 (50%), Gaps = 2/114 (1%)
Query: 114 NATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLW 173
++ ++L RV ++ + M G +P ++C ++ L + ++E+A L+
Sbjct: 156 SSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLY 215
Query: 174 NDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEK-GHKPSQVSFRRI 226
+M S + +++ ++LC GKL +A + F+ +E G KP+ VS+ I
Sbjct: 216 AEMFRLRISSTVYTFNIMVNVLCKEGKLKKA-REFIGFMEGLGFKPNVVSYNTI 268
>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
Length = 747
Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 131/261 (50%), Gaps = 4/261 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ P +++Y LI CK + +A + +++MR + P+ +YT+++ G G
Sbjct: 336 MLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGY 395
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A VLKEM + G P YNA I +CIA ++ DA ++++M EKGL+P+ +Y+
Sbjct: 396 MNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYST 455
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F S D+ + + +M+ G P+T + L++ Q + + A L+++M+ G
Sbjct: 456 VLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVG 515
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEAL 239
L + C G L +A + EM+EKG P V++ I L + A +EA
Sbjct: 516 LPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAK 575
Query: 240 QNLSNKMALFGPSMIPKREEY 260
+ L + LF +P Y
Sbjct: 576 RLL---LKLFYEESVPSDVTY 593
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 112/226 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G P++V+YN LID YCK R+++ ++++ M + + P++ISY +I GL G+
Sbjct: 231 MEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGR 290
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ VL EM + G D YN I+ YC A + EM+ GLSP+ TY
Sbjct: 291 MKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTS 350
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ + +M G PN ++ LV ++ + A ++ +M++ G
Sbjct: 351 LIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNG 410
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
F ++ + L + C GK+V+A +M EKG P VS+ +
Sbjct: 411 FSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTV 456
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 107/223 (47%), Gaps = 20/223 (8%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E G+ PD+VSY+ ++ +C+ V++A ++ KM + I PD I+Y+S+I G +
Sbjct: 441 MKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRR 500
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A D+ EM G PD Y A I YC+ L+ A L +EMVEKG+ P+ TY++
Sbjct: 501 TKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSV 560
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
R + L ++ +P+ + L++ C E + + KG
Sbjct: 561 LINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLI------KG 614
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
F C G + EA++ F M+EK HKP ++
Sbjct: 615 F--------------CMKGMMTEADQVFESMLEKNHKPDGTAY 643
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 98/223 (43%), Gaps = 1/223 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKD-RQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
G P ++SYN ++D + R + A + ++M +SP+V +Y +I G L G D
Sbjct: 164 GFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDV 223
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
A M++ GC P+ YN I YC +++ D L+ M KGL PN +YN+
Sbjct: 224 ALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVIN 283
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
++ + M G + + L+K ++ AL + +M+ G
Sbjct: 284 GLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSP 343
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ L +C G + A + +M +G P++ ++ +
Sbjct: 344 SVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTL 386
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 87/180 (48%), Gaps = 2/180 (1%)
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKR-LRDASGLMDEMVEKGLSPNATTYNL 120
DKA ++ + +G P +YNA + +KR + A + EM++ +SPN TYN+
Sbjct: 151 DKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLQSQVSPNVFTYNI 210
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
R F + +L + + RM GCLPN + L+ + K++ +L M KG
Sbjct: 211 LIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKG 270
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
++ +V+ + LC G++ E EM ++G+ +V++ IK + N +AL
Sbjct: 271 LEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQAL 330
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 86/196 (43%), Gaps = 15/196 (7%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISY------------ 48
M E GV PD+V+Y+ LI+ K + +A +++ K+ E+ P ++Y
Sbjct: 546 MVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEF 605
Query: 49 ---TSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDE 105
S+I G + G +A V + M E PD AYN I +C +R A L E
Sbjct: 606 KSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKE 665
Query: 106 MVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEK 165
MV+ G + T + + + ++ ++ + L + LV++ R+
Sbjct: 666 MVKSGFLLHTVTVIALVKTLHKEGKVNELNSVIANVLRSCELSEAEQAKVLVEINHREGN 725
Query: 166 VEIALQLWNDMVEKGF 181
+++ L + +M + GF
Sbjct: 726 MDVVLDVLAEMAKDGF 741
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 99/233 (42%), Gaps = 4/233 (1%)
Query: 13 YNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSII-GGLGLVGQPDKARDVLKEM 71
++ ++ Y + ++KA IV + P V+SY +++ + A +V KEM
Sbjct: 137 FDLVVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196
Query: 72 KEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDL 131
+ P+ YN IR +C+A L A D M +KG PN TYN + +
Sbjct: 197 LQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKI 256
Query: 132 RSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYILVSDV 190
+ L M G PN S ++ LC+ EI+ L +M ++G+ + +
Sbjct: 257 DDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVL-TEMNKRGYSLDEVTYNT 315
Query: 191 LFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNL 242
L C G +A EM+ G PS +++ I ++ + N A + L
Sbjct: 316 LIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFL 368
>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
Length = 755
Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 114/223 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MRE G++PD SY+ L+ CK +++ A K+ E + D PDV++Y+++I GL G+
Sbjct: 257 MRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGR 316
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + ++M+E C PD + A + C RL++A +++ M ++ +PN TY+
Sbjct: 317 LDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSS 376
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ +R + ++ RM+ G PN + L+ V+ AL L +M G
Sbjct: 377 LIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATG 436
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I+ + L D LC G+ EA + F +M K P +++
Sbjct: 437 CLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITY 479
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 115/217 (52%), Gaps = 2/217 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD+V+Y+ LI CK ++++A K+ EKMR+ PDV+++T+++ GL + +A+ V
Sbjct: 299 PDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQV 358
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L+ M++ C P+ Y++ I C ++RDA + M+ +G+ PN TYN F
Sbjct: 359 LETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCM 418
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+N + S+ L M TGCLP+ + L+ LCK E A +L+ DM K ++
Sbjct: 419 TNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPE-ANRLFGDMKAKFCNPDVI 477
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
L C + ++ A F +M+++ P V+F
Sbjct: 478 TYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTF 514
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 112/223 (50%), Gaps = 2/223 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G++P++V+YN LI +C V+ A ++E+M PD+I+Y ++I GL G+ +A
Sbjct: 401 GIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEA 460
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ +MK C PD Y+ I +C +R+ A L D+M+++ + P+ T++
Sbjct: 461 NRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEG 520
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGS 183
+ + + + L M+ + C P+ + LV CK VE A ++ M ++G
Sbjct: 521 YCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVE-ARRVLKRMAKRGCQP 579
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ L D C GK A + EM+ G +P+ +++R +
Sbjct: 580 NVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSL 622
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 119/259 (45%), Gaps = 2/259 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + P++++Y+ LID CK QV A ++ ++M I P+V++Y S+I G +
Sbjct: 362 MEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNG 421
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A +++EM GC PD YN I C R +A+ L +M K +P+ TY+
Sbjct: 422 VDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSC 481
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + + L+ M+ LP+ + LV+ V+ A +L +MV
Sbjct: 482 LIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASD 541
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ L D C +G++VEA + M ++G +P+ V++ + A K
Sbjct: 542 CSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAY 601
Query: 241 NLSNKMALFG--PSMIPKR 257
L +M G P++I R
Sbjct: 602 RLLEEMVGNGVQPNVITYR 620
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 119/259 (45%), Gaps = 32/259 (12%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
++ G ++ +YN L + + R++++ I++ I+P+V +Y +I GL G
Sbjct: 16 KQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDL 75
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAK--------------------------- 94
DKA ++L+EM+E G PDAA YN I C A+
Sbjct: 76 DKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMECEKNVITWTIMIDG 135
Query: 95 -----RLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPN 149
RL +A+ +M +KG PN TYN+ F + + ++ L M +G PN
Sbjct: 136 LCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPN 195
Query: 150 TQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFL 209
+ ++ RQ KV+ A +L+ MVE G ++ + L LC G + EA +
Sbjct: 196 VVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLD 255
Query: 210 EMIEKGHKPSQVSFRRIKA 228
EM E+G +P + S+ + A
Sbjct: 256 EMRERGLQPDKFSYDTLMA 274
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 114/246 (46%), Gaps = 3/246 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MRE G PD YN +I CK R KA ++ R + +VI++T +I GL +
Sbjct: 85 MRESGPVPDAAIYNFVIHALCKARNTAKA---LDYFRSMECEKNVITWTIMIDGLCKANR 141
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A +MK+ G P+ YN I +C ++ A L+ EM E GL+PN TY+
Sbjct: 142 LPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYST 201
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + +++ L+ +M+ GC+PN + L+ R ++ A +L ++M E+G
Sbjct: 202 VIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERG 261
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
D L LC GK+ A K F + P V++ + A + A + +
Sbjct: 262 LQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEAC 321
Query: 241 NLSNKM 246
L KM
Sbjct: 322 KLFEKM 327
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 124/252 (49%), Gaps = 10/252 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + V PD+V+++ L++ YC V+ A +++E+M D SPDV +YTS++ G VG+
Sbjct: 502 MLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGR 561
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR VLK M + GC P+ Y A I +C A + A L++EMV G+ PN TY
Sbjct: 562 MVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRS 621
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-----LCKRQEKVEIALQLWND 175
F + DL + + R+ N ++ MF + LC R ++ AL+L
Sbjct: 622 LIGGFCGTGDLEEARKILERLERD---ENCKADMFAYRVMMDGLC-RTGRMSAALELLEA 677
Query: 176 MVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEM-IEKGHKPSQVSFRRIKALMELAN 234
+ + G + L LC +L +A + EM + + +P+ ++ + +
Sbjct: 678 IKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREG 737
Query: 235 KQEALQNLSNKM 246
+ E L++++
Sbjct: 738 RHEEANALADEL 749
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 138/291 (47%), Gaps = 37/291 (12%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G P+ +YN LI+ +CK +V +AY ++++M++ ++P+V++Y+++I G +
Sbjct: 152 MKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTK 211
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A + ++M E GC P+ YN + C + +A L+DEM E+GL P+ +Y+
Sbjct: 212 VDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDT 271
Query: 121 F-------------FRVFYWSND----------------------LRSSWNLYCRMMGTG 145
+VF +++ L + L+ +M
Sbjct: 272 LMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENS 331
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
C P+ + L+ + ++++ A Q+ M ++ ++ L D LC G++ +A+
Sbjct: 332 CEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQ 391
Query: 206 KSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFG--PSMI 254
+ F MI +G +P+ V++ + + N ++ L +M G P +I
Sbjct: 392 EVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDII 442
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 113/240 (47%), Gaps = 5/240 (2%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
R M + +++++ +ID CK ++ +A KM+ + P+ +Y +I G V +
Sbjct: 118 RSMECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKV 177
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
+A +LKEMKE G P+ Y+ I +C ++ A L +MVE G PN TYN
Sbjct: 178 HRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTL 237
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSC-MFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + ++ L M G P+ S + LCK K+++AL+++ D
Sbjct: 238 LSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCK-TGKIDMALKVFEDNSNGD 296
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
++ L LC G+L EA K F +M E +P V+F ALM+ K + LQ
Sbjct: 297 CPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTF---TALMDGLCKGDRLQ 353
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 63/140 (45%), Gaps = 37/140 (26%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKM-RDEDISPDVISYTSIIGGLGLVGQPDK 63
GV+P++++Y LI +C +E+A KI+E++ RDE+ D+ +Y ++ GL G+
Sbjct: 611 GVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMSA 670
Query: 64 ARDVLKEMKEYGC------------------------------------YPDAAAYNAAI 87
A ++L+ +K+ G P+A AY A I
Sbjct: 671 ALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVI 730
Query: 88 RNYCIAKRLRDASGLMDEMV 107
+ R +A+ L DE++
Sbjct: 731 QELAREGRHEEANALADELL 750
>gi|449504220|ref|XP_004162287.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic-like [Cucumis sativus]
Length = 566
Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 79/255 (30%), Positives = 125/255 (49%), Gaps = 4/255 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G KPD+ L+ CK ++ KA K++E M I PD SYT ++ L G
Sbjct: 88 MVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGIIPDAASYTFLVSSLCRKGN 147
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A ++ +M+EYG + A YN+ +R C+ L + L+D +++KGL PNA TY+
Sbjct: 148 VGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSF 207
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEK 179
Y + L ++ G PN S + L LCK + + E A+QL+ ++ K
Sbjct: 208 LLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCK-EGRTEDAMQLFRELPSK 266
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQE-A 238
GF ++ ++L LC+ G+ EA EM PS V++ + + L + E A
Sbjct: 267 GFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGSLTLHGRTEHA 326
Query: 239 LQNLSNKM-ALFGPS 252
L+ L + A F P+
Sbjct: 327 LEVLEEMIRARFKPT 341
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 101/207 (48%)
Query: 17 IDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGC 76
+D K+ ++ A+ +E M ++ PDV T ++ L + KA V++ M G
Sbjct: 69 LDQKSKELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGI 128
Query: 77 YPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWN 136
PDAA+Y + + C + A L+D+M E G N TYN R +L S
Sbjct: 129 IPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQ 188
Query: 137 LYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLC 196
L R++ G +PN + FL++ ++ + A +L ++++ KG ++ +VL LC
Sbjct: 189 LLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLC 248
Query: 197 DMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G+ +A + F E+ KG P+ VS+
Sbjct: 249 KEGRTEDAMQLFRELPSKGFSPNVVSY 275
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 102/211 (48%), Gaps = 5/211 (2%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G P++VSYN L+ C + + E+A ++ +M ++ SP ++Y +IG L L G+ + A
Sbjct: 267 GFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGSLTLHGRTEHA 326
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+VL+EM P A++YN I C +++ +D+M+ + +PN TYN
Sbjct: 327 LEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPNEGTYNA-IAT 385
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSC--MFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
++ ++++ + +G +TQ + + LC R+ A QL +M + GF
Sbjct: 386 LCEEGMVQEAFSI-IQSLGNKQHFSTQEFYKIVITSLC-RKGNTYPAFQLLYEMTKYGFT 443
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIE 213
L LC G L EA + F M E
Sbjct: 444 PDSFTYSSLIRGLCMEGMLNEAIEIFSVMEE 474
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 100/224 (44%), Gaps = 5/224 (2%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G KP++VSYN L+ CK+ + E A ++ ++ + SP+V+SY ++ L G+ ++A
Sbjct: 232 GGKPNLVSYNVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEA 291
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+L EM P YN I + + R A +++EM+ P A++YN +
Sbjct: 292 NVLLAEMDGDERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPI--I 349
Query: 125 FYWSNDLRSSWNLYC--RMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
D + + C +MM C PN + + LC+ + V+ A + + K
Sbjct: 350 ARLCKDRKVDLVVKCLDQMMYRHCNPNEGTYNAIATLCE-EGMVQEAFSIIQSLGNKQHF 408
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
S ++ LC G A + EM + G P ++ +
Sbjct: 409 STQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSL 452
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 54/109 (49%), Gaps = 1/109 (0%)
Query: 13 YNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMK 72
Y +I C+ A++++ +M +PD +Y+S+I GL + G ++A ++ M+
Sbjct: 414 YKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVME 473
Query: 73 EYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
E D YN+ I C ++R A + + MV KG N TTY +
Sbjct: 474 E-NIKLDTENYNSLILGCCKSRRTDLALDVFEIMVGKGYLANETTYTIL 521
>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
Group]
gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
Length = 796
Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 132/283 (46%), Gaps = 35/283 (12%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKM-----------------------RDE 39
E G+ PD+++YN LID YCK V KA+ ++++M R E
Sbjct: 412 EEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYE 471
Query: 40 DIS------------PDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAI 87
D PD +SY +++ P+ A + +M E P + YN I
Sbjct: 472 DAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLI 531
Query: 88 RNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCL 147
+ C +RL++A ++E+VEKGL P+ TTYN+ + DL +++ + +M+
Sbjct: 532 KGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFK 591
Query: 148 PNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKS 207
P+ +C L+ K++ AL+L+ VEKG ++ + L +C +G + A
Sbjct: 592 PDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHF 651
Query: 208 FLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFG 250
F +M KG +P ++ + + + A + E N+ +K+A G
Sbjct: 652 FDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSG 694
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 111/222 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ GVKP +V++N ++ CK+ ++E+A +EK+ +E ++PDVI+Y ++I G
Sbjct: 375 MRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGN 434
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA ++ EM G D N + N C KR DA L+ ++G P+ +Y
Sbjct: 435 VAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGT 494
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++ + + L+ +M+ +P+ + L+K R E+++ A+ N++VEKG
Sbjct: 495 VMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKG 554
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
+++ C G L A + +M+E KP V+
Sbjct: 555 LVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVT 596
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 107/219 (48%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD+V+YN L+D K R A +++E+MRD+ + P ++++ ++ L G+ ++A
Sbjct: 347 PDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGK 406
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L+++ E G PD YN I YC A + A LMDEMV KGL + T N
Sbjct: 407 LEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCK 466
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ L G +P+ S ++ ++ E AL+LW+ M+E+ I
Sbjct: 467 MKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSIST 526
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ L LC M +L EA E++EKG P + ++ I
Sbjct: 527 YNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNII 565
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 104/222 (46%), Gaps = 9/222 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G+ PD V+YN L++ +C+ + +A ++ +M+ + I+P +Y +++ +G
Sbjct: 234 MQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGW 293
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLS-PNATTYN 119
+A V++ M YG PD YN C A ++ +A L DEM + P+ TYN
Sbjct: 294 IKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYN 353
Query: 120 LFFRV-FYW---SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWND 175
F W S+ LR L M G P + +VK ++ K+E AL
Sbjct: 354 TLVDACFKWRCSSDALR----LLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEK 409
Query: 176 MVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHK 217
+ E+G ++ + L D C G + +A EM+ KG K
Sbjct: 410 IAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLK 451
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 101/214 (47%), Gaps = 1/214 (0%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E G+ PD +YN +I YCK+ +E A++ KM + PDV++ +++ GL L G+ D
Sbjct: 552 EKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLD 611
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
KA + + E G D YN I++ C + A D+M KGL P+A TYN+
Sbjct: 612 KALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVL 671
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKV-EIALQLWNDMVEKGF 181
+ + N+ ++ +G L + +C L + V E + + EK
Sbjct: 672 SALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQ 731
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
+ + + LC G+L EA+ EM++KG
Sbjct: 732 DNALETYMERLNGLCTGGQLKEAKAVLDEMMQKG 765
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 102/225 (45%), Gaps = 1/225 (0%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E+ + P+ ++N L+ +C + A + M+ +SPD ++Y +++ G
Sbjct: 201 ELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLG 260
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
+AR +L MK G P YN + + ++ A+ +++ M G P+ TYN+
Sbjct: 261 EARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLA 320
Query: 123 RVFYWSNDLRSSWNLYCRMMG-TGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
+ + ++ L M + LP+ + LV C + AL+L +M +KG
Sbjct: 321 VGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGV 380
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ +++ LC GKL EA ++ E+G P +++ +
Sbjct: 381 KPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTL 425
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 77/191 (40%), Gaps = 3/191 (1%)
Query: 17 IDVYCKDRQVEKAYKIVEKMRDE-DISPDVISYTSIIGGLGLVGQ--PDKARDVLKEMKE 73
+ Y + R A +++ +R + P + + +++ L P + DV + + E
Sbjct: 142 LSAYARLRLPHLAAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIE 201
Query: 74 YGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRS 133
+P+ +N + +C L DA + M GLSP+A TYN L
Sbjct: 202 LRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGE 261
Query: 134 SWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFD 193
+ L RM G P + LV R ++ A ++ M GF + +VL
Sbjct: 262 ARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAV 321
Query: 194 LLCDMGKLVEA 204
LC GK+ EA
Sbjct: 322 GLCQAGKVDEA 332
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 56/110 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E KPD+V+ N L++ C +++KA K+ E ++ DVI+Y ++I + VG
Sbjct: 585 MVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGD 644
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKG 110
D A +M+ G PDA YN + A R +A ++ ++ + G
Sbjct: 645 VDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSG 694
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 69/152 (45%), Gaps = 36/152 (23%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E G K D+++YN LI CK V+ A + M + + PD +Y ++ L G+ +
Sbjct: 622 EKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSE 681
Query: 63 KARDVLKEM-------------------------KEYGCYPDA----AAYNAAIRNY--- 90
+A ++L ++ KE+ P+A A + A+ Y
Sbjct: 682 EAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNALETYMER 741
Query: 91 ----CIAKRLRDASGLMDEMVEKGLSPNATTY 118
C +L++A ++DEM++KG+ +++TY
Sbjct: 742 LNGLCTGGQLKEAKAVLDEMMQKGMPVDSSTY 773
>gi|449444222|ref|XP_004139874.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
gi|449492651|ref|XP_004159061.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
Length = 588
Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 121/225 (53%), Gaps = 4/225 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV+P++V+++ LID+ CK+ QV KA K++E M I P++ +YTS+I G LVG
Sbjct: 263 MVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGD 322
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A+++ M G PD +YN I YC ++ +A L +EM+ G+ P+ T +
Sbjct: 323 LNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGV 382
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQ--SCMFLVKLCKRQEKVEIALQLWNDMVE 178
+ + + + + L+ R++ +P C+FL LCK E A++L+N++
Sbjct: 383 LLKALFLAGKVDDAKELF-RVIKPYAMPKDLCICCIFLDGLCKNGYIFE-AMKLFNELES 440
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I L D LC GKL A + F ++ E+G +P +++
Sbjct: 441 YNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAY 485
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 68/113 (60%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+K DI ++ CLID CK ++E A+++ EK+ +E I PD ++Y+S+I G GQ DKA
Sbjct: 443 MKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKAN 502
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
+ ++M+E GC PD Y+ +R + + +L L+ M+EK + P+ Y
Sbjct: 503 ILFQKMEENGCSPDLITYSILMRGFYESNKLEKVVQLLHRMIEKDVWPDDGIY 555
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 102/232 (43%), Gaps = 6/232 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ PD+++ N LI+ C ++ + + + PDV+++T++I GL + +
Sbjct: 117 MHLAGLWPDLLTLNILINCLCNVNRINEGLAAMAGIMRRGYIPDVVTFTTLIKGLCVEHR 176
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEK------GLSPN 114
+A + M++ GC P+ Y I+ C + A EM+ PN
Sbjct: 177 IIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPN 236
Query: 115 ATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWN 174
+Y++ + + L+ M+ G PN + L+ + ++ +V A +L
Sbjct: 237 VISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLE 296
Query: 175 DMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
M++ G + L C +G L A++ F+ M KG++P +S+ +
Sbjct: 297 MMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNML 348
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 103/224 (45%), Gaps = 8/224 (3%)
Query: 10 IVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLK 69
I S+N L+ K + + + ++M + PD+++ +I L V + ++ +
Sbjct: 91 IFSFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAMA 150
Query: 70 EMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSN 129
+ G PD + I+ C+ R+ +A+ L M + G +PN TY +
Sbjct: 151 GIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALG 210
Query: 130 DLRSSWNLYCRMMGT------GCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFG 182
++ + + M+ C PN S ++ LCK E A+ L+N+MV++G
Sbjct: 211 NINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEE-AICLFNEMVDQGVQ 269
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ VL D+LC G++++A+K MI+ G P+ ++ +
Sbjct: 270 PNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSL 313
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 100/230 (43%), Gaps = 39/230 (16%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G +PD++SYN LI+ YCK +VE+A K+ +M + PDV + ++ L L G+
Sbjct: 333 MPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGK 392
Query: 61 PDKARDVLK-----------------------------------EMKEYGCYPDAAAYNA 85
D A+++ + E++ Y D +
Sbjct: 393 VDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGC 452
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
I C A +L A L +++ E+G+ P+A Y+ F + + L+ +M G
Sbjct: 453 LIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENG 512
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF----GSYILVSDVL 191
C P+ + L++ K+E +QL + M+EK G Y +V D++
Sbjct: 513 CSPDLITYSILMRGFYESNKLEKVVQLLHRMIEKDVWPDDGIYAIVEDMV 562
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 84/166 (50%), Gaps = 4/166 (2%)
Query: 16 LIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYG 75
+D CK+ + +A K+ ++ ++ D+ ++ +I GL G+ + A ++ +++ E G
Sbjct: 418 FLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEG 477
Query: 76 CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSW 135
PDA AY++ I +C ++ A+ L +M E G SP+ TY++ R FY SN L
Sbjct: 478 IQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVV 537
Query: 136 NLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
L RM+ P+ + + + EK + W D++++ F
Sbjct: 538 QLLHRMIEKDVWPDDGIYAIVEDMVCKDEKY----KEWLDLLQRFF 579
>gi|449453792|ref|XP_004144640.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic-like [Cucumis sativus]
Length = 566
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/255 (30%), Positives = 125/255 (49%), Gaps = 4/255 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G KPD+ L+ CK ++ KA K++E M I PD SYT ++ L G
Sbjct: 88 MVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGIIPDAASYTFLVSSLCRKGN 147
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A ++ +M+EYG + A YN+ +R C+ L + L+D +++KGL PNA TY+
Sbjct: 148 VGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSF 207
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEK 179
Y + L ++ G PN S + L LCK + + E A+QL+ ++ K
Sbjct: 208 LLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCK-EGRTEDAMQLFRELPSK 266
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQE-A 238
GF ++ ++L LC+ G+ EA EM PS V++ + + L + E A
Sbjct: 267 GFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGSLTLHGRTEHA 326
Query: 239 LQNLSNKM-ALFGPS 252
L+ L + A F P+
Sbjct: 327 LEVLEEMIRARFKPT 341
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 101/207 (48%)
Query: 17 IDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGC 76
+D K+ ++ A+ +E M ++ PDV T ++ L + KA V++ M G
Sbjct: 69 LDQKSKELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGI 128
Query: 77 YPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWN 136
PDAA+Y + + C + A L+D+M E G N TYN R +L S
Sbjct: 129 IPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQ 188
Query: 137 LYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLC 196
L R++ G +PN + FL++ ++ + A +L ++++ KG ++ +VL LC
Sbjct: 189 LLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLC 248
Query: 197 DMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G+ +A + F E+ KG P+ VS+
Sbjct: 249 KEGRTEDAMQLFRELPSKGFSPNVVSY 275
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 102/211 (48%), Gaps = 5/211 (2%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G P++VSYN L+ C + + E+A ++ +M ++ SP ++Y +IG L L G+ + A
Sbjct: 267 GFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGSLTLHGRTEHA 326
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+VL+EM P A++YN I C +++ +D+M+ + +PN TYN
Sbjct: 327 LEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPNEGTYNA-IAT 385
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSC--MFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
++ ++++ + +G +TQ + + LC R+ A QL +M + GF
Sbjct: 386 LCEEGMVQEAFSI-IQSLGNKQHFSTQEFYKIVITSLC-RKGNTYPAFQLLYEMTKYGFT 443
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIE 213
L LC G L EA + F M E
Sbjct: 444 PDSFTYSSLIRGLCMEGMLNEAIEIFSVMEE 474
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 100/224 (44%), Gaps = 5/224 (2%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G KP++VSYN L+ CK+ + E A ++ ++ + SP+V+SY ++ L G+ ++A
Sbjct: 232 GGKPNLVSYNVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEA 291
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+L EM P YN I + + R A +++EM+ P A++YN +
Sbjct: 292 NVLLAEMDGDERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPI--I 349
Query: 125 FYWSNDLRSSWNLYC--RMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
D + + C +MM C PN + + LC+ + V+ A + + K
Sbjct: 350 ARLCKDRKVDLVVKCLDQMMYRHCNPNEGTYNAIATLCE-EGMVQEAFSIIQSLGNKQHF 408
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
S ++ LC G A + EM + G P ++ +
Sbjct: 409 STQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSL 452
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 54/109 (49%), Gaps = 1/109 (0%)
Query: 13 YNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMK 72
Y +I C+ A++++ +M +PD +Y+S+I GL + G ++A ++ M+
Sbjct: 414 YKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVME 473
Query: 73 EYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
E D YN+ I C ++R A + + MV KG N TTY +
Sbjct: 474 E-NIKLDTENYNSLILGCCKSRRTDLALDVFEIMVGKGYLANETTYTIL 521
>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 867
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 115/226 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV P++V+YN ++ CK R ++KA ++ +M D I PD ++YT++I G +G+
Sbjct: 298 MVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGR 357
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + KEM G PD +N+ + + C KR ++A+ + + KG P+ +Y++
Sbjct: 358 WKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSI 417
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ NL+ M G + ++ L+ ++ ++ AL ++ +M +G
Sbjct: 418 LLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQG 477
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ + LC MG+L +A + +MI G KP+ V + +
Sbjct: 478 VSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSL 523
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 103/217 (47%), Gaps = 3/217 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDED-ISPDVISYTSIIGGLGLVG 59
M E+G PD SYN +I C + ++A ++ +M D SPDV+SYT +I GL + G
Sbjct: 227 MSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLFMEG 286
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ KA ++ EM + G P+ YN+ + C A+ + A ++ +M + + P+ TY
Sbjct: 287 EISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYT 346
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVE 178
+ + + ++ M G +P+ + L+ LCK + E A ++++ +
Sbjct: 347 AMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAA-EIFHSIAT 405
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
KG I+ +L G+ V+ F M + G
Sbjct: 406 KGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNG 442
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 96/197 (48%), Gaps = 1/197 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDIS-PDVISYTSIIGGLGLVG 59
M +G+KP+ V Y+ LI +C + KA ++V +M D+ I P++ ++SII L G
Sbjct: 508 MISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEG 567
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ A+DV + G PD +N+ I YC+ ++ A G++D MV G P+ TY+
Sbjct: 568 RVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYS 627
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
++ S + L+ M+ P T + ++ R + A +++++M+E
Sbjct: 628 TLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIES 687
Query: 180 GFGSYILVSDVLFDLLC 196
G I ++ LC
Sbjct: 688 GTAMSISTYTIILQGLC 704
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 122/254 (48%), Gaps = 1/254 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ D +N LI+ + K +++A I +MR + +SP+V++Y ++I L +G+
Sbjct: 438 MTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGR 497
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLS-PNATTYN 119
A + L +M G P+ Y++ I+ +C L A L+ EM+++G+ PN T ++
Sbjct: 498 LADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFS 557
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ ++ +++ ++ G P+ + L+ K++ A + + MV
Sbjct: 558 SIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSA 617
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
G ++ L + G++ + F EM+ K KP+ V++ + + A + A
Sbjct: 618 GTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAA 677
Query: 240 QNLSNKMALFGPSM 253
+ + ++M G +M
Sbjct: 678 KKMFHEMIESGTAM 691
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/223 (20%), Positives = 102/223 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + ++PD V+Y +I Y + ++A K+ ++M E + PD++++ S++ L +
Sbjct: 333 MFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKR 392
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++ + G PD +Y+ + Y R D + L M + G+ ++ +N+
Sbjct: 393 SKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNI 452
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + ++ M G G PN + ++ R ++ A++ + M+ G
Sbjct: 453 LINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIG 512
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+V L C G L++A++ EM+++G ++F
Sbjct: 513 LKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITF 555
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 93/205 (45%), Gaps = 2/205 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G +PD+V+Y+ LI+ Y K +++ + +M + + P ++Y+ ++ GL G+
Sbjct: 614 MVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGR 673
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A+ + EM E G + Y ++ C +A L ++ L N
Sbjct: 674 TSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNT 733
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
Y + +L+ + +G +PN + ++ ++ VE A +++ M + G
Sbjct: 734 MIHALYKVKRREEAHDLFASVSASGLVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTG 793
Query: 181 FG-SYILVSDVLFDLLCDMGKLVEA 204
S L++D++ +L G++V+A
Sbjct: 794 CAPSSRLLNDII-RMLLQKGEIVKA 817
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 91/212 (42%), Gaps = 8/212 (3%)
Query: 19 VYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGL-----VGQPDKARDVLKEMKE 73
V C D A + ++ E+ P V+ T G+ + +PD +
Sbjct: 135 VACSDAPA-LAVALFNRICREEAGPRVVPLTVHTYGILMDCCCRARRPDLGPAFFARLLR 193
Query: 74 YGCYPDAAAYNAAIRNYCIAKRLRDA-SGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLR 132
G D N ++ C AKR +A S L+ M E G P+A +YN + + +
Sbjct: 194 AGLRTDGIVTNTFLKCLCYAKRTDEALSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQ 253
Query: 133 SSWNLYCRMM-GTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVL 191
+ ++ RM G GC P+ S ++ + ++ A L+N+MV+KG ++ + +
Sbjct: 254 EALDMLLRMTKGDGCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSI 313
Query: 192 FDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
LC + +AE +M + +P +V++
Sbjct: 314 VHALCKARAMDKAELVLRQMFDNSIQPDEVTY 345
>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 122/226 (53%), Gaps = 1/226 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+ +GV PD+ + + I K+ +V++A K+ +++++ + PDV +Y+S+I G G+
Sbjct: 316 LHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGE 375
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA ++ EM G P+ YNA + C + ++ A L D M EKGL P++ TY+
Sbjct: 376 VEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYST 435
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ S ++ +++L+ M G P++ LV C ++ +E A+ L+ +M++KG
Sbjct: 436 MIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG 495
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
F + L + L D C K+ EA + F EMI K P V++ +
Sbjct: 496 FAT-TLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTV 540
Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 120/254 (47%), Gaps = 35/254 (13%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+KP++V Y+ LI Y + ++E+A ++++ M ++PD+ Y +II L G+ ++A
Sbjct: 180 GLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEA 239
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
L E++ G PDA + A I Y ++ +A+ DEM++ GL PN Y +
Sbjct: 240 STYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLING 299
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSC-MFLVKLCK---------------------- 161
+ + +L + +++ + G LP+ Q+C F+ L K
Sbjct: 300 HFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPD 359
Query: 162 ------------RQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFL 209
+Q +VE A +L ++M KG I + + L D LC G + A K F
Sbjct: 360 VFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFD 419
Query: 210 EMIEKGHKPSQVSF 223
M EKG +P V++
Sbjct: 420 GMPEKGLEPDSVTY 433
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 117/237 (49%), Gaps = 20/237 (8%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G++PD V+Y+ +ID YCK V +A+ + +M + + P Y +++ G G
Sbjct: 421 MPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGD 480
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY-- 118
+KA ++ +EM + G + ++N I YC + ++++AS L EM+ K + P+ TY
Sbjct: 481 MEKAMNLFREMLQKG-FATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTT 539
Query: 119 --------------NLFFRVFYWSNDLRSS-WNLYCRMMGTGCLPNTQS-CMFLVKLCKR 162
NL F+ N + + + L+ +M+ G P+ + + + CK
Sbjct: 540 VIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKE 599
Query: 163 QEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
VE A +L +++V KG + + D+L LC L EA K EM E G KPS
Sbjct: 600 DNLVE-AFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPS 655
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 108/223 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G+KPD + + LID + ++ +++ +I + M I ++I+Y +I GL G+
Sbjct: 36 MQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGK 95
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA ++LK M GC P++ + I YC + A L+DEM ++ L P+A +Y
Sbjct: 96 MEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGA 155
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
DL + L +M +G PN L+ + ++E A +L + M G
Sbjct: 156 MINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSG 215
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I + + L GK+ EA LE+ +G KP V+F
Sbjct: 216 VAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTF 258
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 106/226 (46%), Gaps = 1/226 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ P+ Y LI+ + K + +A I + + PDV + ++ I GL G+
Sbjct: 281 MLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGR 340
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A V E+KE G PD Y++ I +C + A L DEM KG++PN YN
Sbjct: 341 VQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNA 400
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
S D++ + L+ M G P++ + ++ + E V A L+++M KG
Sbjct: 401 LVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKG 460
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ V + L C G + +A F EM++KG + +SF +
Sbjct: 461 VQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-ATTLSFNTL 505
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 104/226 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + + P VSY +I+ C + + A K++EKM + P+V+ Y+++I G G+
Sbjct: 141 MEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGR 200
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++AR +L M G PD YNA I A ++ +AS + E+ +GL P+A T+
Sbjct: 201 IEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGA 260
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + + + + + M+ G +PN L+ + + AL ++ + G
Sbjct: 261 FILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALG 320
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ L G++ EA K F E+ EKG P ++ +
Sbjct: 321 VLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSL 366
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 101/223 (45%), Gaps = 2/223 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+KPD V++ I Y K ++ +A K ++M D + P+ YT +I G G +A
Sbjct: 250 GLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEA 309
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ + + G PD +A I R+++A + E+ EKGL P+ TY+
Sbjct: 310 LSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISG 369
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGS 183
F ++ ++ L+ M G PN LV LCK + ++ A +L++ M EKG
Sbjct: 370 FCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGD-IQRARKLFDGMPEKGLEP 428
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + D C + EA F EM KG +P + +
Sbjct: 429 DSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNAL 471
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 109/244 (44%), Gaps = 1/244 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G KP+ ++ LI+ YC++ + +A +++++M ++ P +SY ++I GL
Sbjct: 106 MITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKD 165
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +L++M G P+ Y+ I Y R+ +A L+D M G++P+ YN
Sbjct: 166 LSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNA 225
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + + G G P+ + + + K+ A + +++M++ G
Sbjct: 226 IISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHG 285
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS-QVSFRRIKALMELANKQEAL 239
+ VL + G L+EA F + G P Q I L++ QEAL
Sbjct: 286 LMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEAL 345
Query: 240 QNLS 243
+ S
Sbjct: 346 KVFS 349
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 101/214 (47%), Gaps = 20/214 (9%)
Query: 11 VSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKE 70
+S+N LID YCK ++++A ++ ++M + I PD ++YT++I G+ ++A + KE
Sbjct: 500 LSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKE 559
Query: 71 MKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSND 130
M+E RN + L ++MV KG+ P+ TY L ++
Sbjct: 560 MQE--------------RNLIVDTVF----ALFEKMVAKGVKPDEVTYGLVIYAHCKEDN 601
Query: 131 LRSSWNLYCRMMGTGCLP-NTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSD 189
L ++ L ++G G L T + + LCKR++ E A +L ++M E G +
Sbjct: 602 LVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTE-ASKLLDEMGELGLKPSLAACS 660
Query: 190 VLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
L + GK+ EA + F + G P +
Sbjct: 661 TLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTL 694
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 87/191 (45%)
Query: 36 MRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKR 95
M ++ + P+ +YT I GL + ++A+ +EM++ G PD A +A I +
Sbjct: 1 MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60
Query: 96 LRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMF 155
+ + + D MV G+ N TYN+ + + + M+ GC PN+++
Sbjct: 61 IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 120
Query: 156 LVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
L++ R+ + AL+L ++M ++ + + + LC L A K +M G
Sbjct: 121 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 180
Query: 216 HKPSQVSFRRI 226
KP+ V + +
Sbjct: 181 LKPNVVVYSTL 191
>gi|115447913|ref|NP_001047736.1| Os02g0679200 [Oryza sativa Japonica Group]
gi|50253128|dbj|BAD29374.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113537267|dbj|BAF09650.1| Os02g0679200 [Oryza sativa Japonica Group]
Length = 491
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 121/253 (47%), Gaps = 13/253 (5%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMR-----DEDISPDVISYTSIIGGL 55
M E G+ P +YN ++ + + Q+ A+ +M+ DE PDV+SYT+++ GL
Sbjct: 225 MVESGIAPTKTTYNIILKGFFRAGQLRHAWDFFLQMKKRGSKDESCKPDVVSYTTMVHGL 284
Query: 56 GLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNA 115
G+ GQ +KAR V EM + GC P A YNA I+ C + DA + D M KG PN
Sbjct: 285 GVAGQLEKARKVFDEMAKEGCAPSVATYNALIQVICKKGNVEDAVTVFDGMRVKGYVPNV 344
Query: 116 TTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWND 175
TY + R + + L RM GC P Q+ L++ + ++E L L+
Sbjct: 345 VTYTVLIRGLCHAGKIDRGLKLLERMKNGGCEPIVQTYNVLIRYLFEEGEMEKGLDLFEK 404
Query: 176 MVEKG------FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKAL 229
M KG +Y ++ +F + +V A + EM+++G+ P + F R+
Sbjct: 405 M-SKGEECLPNQDTYNIIISAMF-MRKRAEDMVLAARMVEEMVDRGYLPRRFMFNRVLNG 462
Query: 230 MELANKQEALQNL 242
+ L QE + L
Sbjct: 463 LMLTGNQELSRKL 475
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 91/192 (47%), Gaps = 6/192 (3%)
Query: 37 RDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRL 96
R ++ D+ + S++ L KA +++ + E PD YN +C K
Sbjct: 157 RSHRVAQDLPLFNSLLDALSKSRHAGKAASLVRAL-EQRFTPDVVTYNTLADGWCRVKDT 215
Query: 97 RDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG-----CLPNTQ 151
A ++ MVE G++P TTYN+ + F+ + LR +W+ + +M G C P+
Sbjct: 216 SRALDVLRLMVESGIAPTKTTYNIILKGFFRAGQLRHAWDFFLQMKKRGSKDESCKPDVV 275
Query: 152 SCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEM 211
S +V ++E A +++++M ++G + + L ++C G + +A F M
Sbjct: 276 SYTTMVHGLGVAGQLEKARKVFDEMAKEGCAPSVATYNALIQVICKKGNVEDAVTVFDGM 335
Query: 212 IEKGHKPSQVSF 223
KG+ P+ V++
Sbjct: 336 RVKGYVPNVVTY 347
>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
Length = 1007
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 125/266 (46%), Gaps = 2/266 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P+IV+YN +I YC +KA ++ M S ++++Y +II G G
Sbjct: 416 MGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGN 475
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +L M++ GC PD +Y I +C ++ A GL +EMV+ GL PN TY
Sbjct: 476 TTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTA 535
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L ++ +L M +GC PN Q+ L+ +Q A +L M+E+G
Sbjct: 536 LIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEG 595
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
++ + D LC G A + F +MIE+G P+ +++ + + K E +
Sbjct: 596 IFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAE 655
Query: 241 NLSNKMALFGPSMIPKREEYLAEMSA 266
NL ++ G +IP Y+ + A
Sbjct: 656 NLFAELERHG--LIPDEITYVKMIEA 679
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 114/246 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G ++V+YN +I YC A +I++ MRD PD SYT +I G + +
Sbjct: 451 MLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISK 510
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A + EM + G P+ Y A I YC ++L A+ L++ M G PN TYN+
Sbjct: 511 MESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNV 570
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
N+ + L M+ G PN + ++ + +AL+++N M+E+G
Sbjct: 571 LIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQG 630
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+L L L GK+ EAE F E+ G P ++++ ++ ++ K E
Sbjct: 631 CLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAF 690
Query: 241 NLSNKM 246
N +M
Sbjct: 691 NFLGRM 696
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 117/278 (42%), Gaps = 36/278 (12%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV+P+++ YN +I+ CKD V A I++K+ + ++SPD +YTS+I G
Sbjct: 206 MLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHD 265
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMV------------- 107
D A V +M + GC P+ Y+ I C + R+ +A L+ EM+
Sbjct: 266 LDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTG 325
Query: 108 ----------------------EKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
KG PN TY S L+ + L+ RM G
Sbjct: 326 PIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDG 385
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
PNT + L+ + +++ A + N M G I+ + + C +G +A
Sbjct: 386 VFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAM 445
Query: 206 KSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNL 242
M+++GH + V++ IK + N AL+ L
Sbjct: 446 LVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRIL 483
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 106/253 (41%), Gaps = 30/253 (11%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G +P++ +YN LI K A ++ + M +E I P+V++YT++I GL G
Sbjct: 556 MKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGS 615
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A ++ +M E GC P+ Y++ IR ++ +A L E+ GL P+ TY
Sbjct: 616 TSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVK 675
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKR------------------ 162
+ S + ++N RM+ GC P + L+K K
Sbjct: 676 MIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPN 735
Query: 163 ---------QEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIE 213
Q+ V + + + E G + V + L L G+ EA + MI
Sbjct: 736 CSFGYQTTDQDAVSV---MSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMIS 792
Query: 214 KGHKPSQVSFRRI 226
+G P Q ++ +
Sbjct: 793 QGLCPDQEAYNSL 805
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 95/224 (42%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+ + G++ + +Y+ L+ + +M E + P+++ Y ++I L G
Sbjct: 171 LSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGN 230
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A ++K++ E PD Y + I +C L A + ++M ++G PN TY+
Sbjct: 231 VADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYST 290
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMF-LVKLCKRQEKVEIALQLWNDMVEK 179
S + +++L M+ G LP +C ++ LC E A +L+ DM K
Sbjct: 291 LINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCD-MGCYEDAWRLFVDMKNK 349
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G + L LC G L A F M G P+ V++
Sbjct: 350 GCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTY 393
>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 935
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 122/226 (53%), Gaps = 1/226 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+ +GV PD+ + + I K+ +V++A K+ +++++ + PDV +Y+S+I G G+
Sbjct: 515 LHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGE 574
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA ++ EM G P+ YNA + C + ++ A L D M EKGL P++ TY+
Sbjct: 575 VEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYST 634
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ S ++ +++L+ M G P++ LV C ++ +E A+ L+ +M++KG
Sbjct: 635 MIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG 694
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
F + L + L D C K+ EA + F EMI K P V++ +
Sbjct: 695 FAT-TLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTV 739
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 120/254 (47%), Gaps = 35/254 (13%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+KP++V Y+ LI Y + ++E+A ++++ M ++PD+ Y +II L G+ ++A
Sbjct: 379 GLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEA 438
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
L E++ G PDA + A I Y ++ +A+ DEM++ GL PN Y +
Sbjct: 439 STYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLING 498
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSC-MFLVKLCK---------------------- 161
+ + +L + +++ + G LP+ Q+C F+ L K
Sbjct: 499 HFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPD 558
Query: 162 ------------RQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFL 209
+Q +VE A +L ++M KG I + + L D LC G + A K F
Sbjct: 559 VFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFD 618
Query: 210 EMIEKGHKPSQVSF 223
M EKG +P V++
Sbjct: 619 GMPEKGLEPDSVTY 632
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 119/255 (46%), Gaps = 38/255 (14%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G++PD V+Y+ +ID YCK V +A+ + +M + + P Y +++ G G
Sbjct: 620 MPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGD 679
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY-- 118
+KA ++ +EM + G + ++N I YC + ++++AS L EM+ K + P+ TY
Sbjct: 680 MEKAMNLFREMLQKG-FATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTT 738
Query: 119 --------------NLFFR----------------VFYWSNDLRSS---WNLYCRMMGTG 145
NL F+ + Y N L S + L+ +M+ G
Sbjct: 739 VIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKG 798
Query: 146 CLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEA 204
P+ + + + CK VE A +L +++V KG + + D+L LC L EA
Sbjct: 799 VKPDEVTYGLVIYAHCKEDNLVE-AFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEA 857
Query: 205 EKSFLEMIEKGHKPS 219
K EM E G KPS
Sbjct: 858 SKLLDEMGELGLKPS 872
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 108/223 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G+KPD + + LID + ++ +++ +I + M I ++I+Y +I GL G+
Sbjct: 235 MQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGK 294
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA ++LK M GC P++ + I YC + A L+DEM ++ L P+A +Y
Sbjct: 295 MEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGA 354
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
DL + L +M +G PN L+ + ++E A +L + M G
Sbjct: 355 MINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSG 414
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I + + L GK+ EA LE+ +G KP V+F
Sbjct: 415 VAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTF 457
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 106/226 (46%), Gaps = 1/226 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ P+ Y LI+ + K + +A I + + PDV + ++ I GL G+
Sbjct: 480 MLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGR 539
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A V E+KE G PD Y++ I +C + A L DEM KG++PN YN
Sbjct: 540 VQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNA 599
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
S D++ + L+ M G P++ + ++ + E V A L+++M KG
Sbjct: 600 LVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKG 659
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ V + L C G + +A F EM++KG + +SF +
Sbjct: 660 VQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-ATTLSFNTL 704
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 104/226 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + + P VSY +I+ C + + A K++EKM + P+V+ Y+++I G G+
Sbjct: 340 MEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGR 399
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++AR +L M G PD YNA I A ++ +AS + E+ +GL P+A T+
Sbjct: 400 IEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGA 459
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + + + + + M+ G +PN L+ + + AL ++ + G
Sbjct: 460 FILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALG 519
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ L G++ EA K F E+ EKG P ++ +
Sbjct: 520 VLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSL 565
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 105/214 (49%), Gaps = 2/214 (0%)
Query: 11 VSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKE 70
+S+N LID YCK ++++A ++ ++M + I PD ++YT++I G+ ++A + KE
Sbjct: 699 LSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKE 758
Query: 71 MKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSND 130
M+E D Y + + Y + + L ++MV KG+ P+ TY L ++
Sbjct: 759 MQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDN 818
Query: 131 LRSSWNLYCRMMGTGCLP-NTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSD 189
L ++ L ++G G L T + + LCKR++ E A +L ++M E G +
Sbjct: 819 LVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTE-ASKLLDEMGELGLKPSLAACS 877
Query: 190 VLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
L + GK+ EA + F + G P +
Sbjct: 878 TLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTL 911
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 101/223 (45%), Gaps = 2/223 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+KPD V++ I Y K ++ +A K ++M D + P+ YT +I G G +A
Sbjct: 449 GLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEA 508
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ + + G PD +A I R+++A + E+ EKGL P+ TY+
Sbjct: 509 LSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISG 568
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGS 183
F ++ ++ L+ M G PN LV LCK + ++ A +L++ M EKG
Sbjct: 569 FCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGD-IQRARKLFDGMPEKGLEP 627
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + D C + EA F EM KG +P + +
Sbjct: 628 DSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNAL 670
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 94/192 (48%), Gaps = 7/192 (3%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ PD V+Y +ID +CK ++E+A + ++M++ ++ D ++YTS++ G +GQ +
Sbjct: 729 IMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVF 788
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+ ++M G PD Y I +C L +A L DE+V KG+ T ++L
Sbjct: 789 ALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITAL 848
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
DL + L M G P+ +C LV+ K++ A +++ +G S
Sbjct: 849 CKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVF-----EGVKSLG 903
Query: 186 LVSD--VLFDLL 195
LV D L DL+
Sbjct: 904 LVPDTTTLIDLV 915
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 109/244 (44%), Gaps = 1/244 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G KP+ ++ LI+ YC++ + +A +++++M ++ P +SY ++I GL
Sbjct: 305 MITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKD 364
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +L++M G P+ Y+ I Y R+ +A L+D M G++P+ YN
Sbjct: 365 LSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNA 424
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + + G G P+ + + + K+ A + +++M++ G
Sbjct: 425 IISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHG 484
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS-QVSFRRIKALMELANKQEAL 239
+ VL + G L+EA F + G P Q I L++ QEAL
Sbjct: 485 LMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEAL 544
Query: 240 QNLS 243
+ S
Sbjct: 545 KVFS 548
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 88/194 (45%)
Query: 33 VEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCI 92
+ M ++ + P+ +YT I GL + ++A+ +EM++ G PD A +A I +
Sbjct: 197 LRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMR 256
Query: 93 AKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS 152
+ + + D MV G+ N TYN+ + + + M+ GC PN+++
Sbjct: 257 EGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRT 316
Query: 153 CMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMI 212
L++ R+ + AL+L ++M ++ + + + LC L A K +M
Sbjct: 317 FCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMT 376
Query: 213 EKGHKPSQVSFRRI 226
G KP+ V + +
Sbjct: 377 FSGLKPNVVVYSTL 390
>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 918
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 125/266 (46%), Gaps = 2/266 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P+IV+YN +I YC +KA ++ M S ++++Y +II G G
Sbjct: 416 MGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGN 475
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +L M++ GC PD +Y I +C ++ A GL +EMV+ GL PN TY
Sbjct: 476 TTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTA 535
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L ++ +L M +GC PN Q+ L+ +Q A +L M+E+G
Sbjct: 536 LIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEG 595
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
++ + D LC G A + F +MIE+G P+ +++ + + K E +
Sbjct: 596 IFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAE 655
Query: 241 NLSNKMALFGPSMIPKREEYLAEMSA 266
NL ++ G +IP Y+ + A
Sbjct: 656 NLFAELERHG--LIPDEITYVKMIEA 679
Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 114/246 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G ++V+YN +I YC A +I++ MRD PD SYT +I G + +
Sbjct: 451 MLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISK 510
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A + EM + G P+ Y A I YC ++L A+ L++ M G PN TYN+
Sbjct: 511 MESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNV 570
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
N+ + L M+ G PN + ++ + +AL+++N M+E+G
Sbjct: 571 LIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQG 630
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+L L L GK+ EAE F E+ G P ++++ ++ ++ K E
Sbjct: 631 CLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAF 690
Query: 241 NLSNKM 246
N +M
Sbjct: 691 NFLGRM 696
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 117/278 (42%), Gaps = 36/278 (12%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV+P+++ YN +I+ CKD V A I++K+ + ++SPD +YTS+I G
Sbjct: 206 MLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHD 265
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMV------------- 107
D A V +M + GC P+ Y+ I C + R+ +A L+ EM+
Sbjct: 266 LDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTG 325
Query: 108 ----------------------EKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
KG PN TY S L+ + L+ RM G
Sbjct: 326 PIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDG 385
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
PNT + L+ + +++ A + N M G I+ + + C +G +A
Sbjct: 386 VFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAM 445
Query: 206 KSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNL 242
M+++GH + V++ IK + N AL+ L
Sbjct: 446 LVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRIL 483
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 106/253 (41%), Gaps = 30/253 (11%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G +P++ +YN LI K A ++ + M +E I P+V++YT++I GL G
Sbjct: 556 MKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGS 615
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A ++ +M E GC P+ Y++ IR ++ +A L E+ GL P+ TY
Sbjct: 616 TSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVK 675
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKR------------------ 162
+ S + ++N RM+ GC P + L+K K
Sbjct: 676 MIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPN 735
Query: 163 ---------QEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIE 213
Q+ V + + + E G + V + L L G+ EA + MI
Sbjct: 736 CSFGYQTTDQDAVSV---MSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMIS 792
Query: 214 KGHKPSQVSFRRI 226
+G P Q ++ +
Sbjct: 793 QGLCPDQEAYNSL 805
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 95/224 (42%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+ + G++ + +Y+ L+ + +M E + P+++ Y ++I L G
Sbjct: 171 LSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGN 230
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A ++K++ E PD Y + I +C L A + ++M ++G PN TY+
Sbjct: 231 VADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYST 290
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMF-LVKLCKRQEKVEIALQLWNDMVEK 179
S + +++L M+ G LP +C ++ LC E A +L+ DM K
Sbjct: 291 LINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCD-MGCYEDAWRLFVDMKNK 349
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G + L LC G L A F M G P+ V++
Sbjct: 350 GCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTY 393
>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
Length = 918
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 125/266 (46%), Gaps = 2/266 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P+IV+YN +I YC +KA ++ M S ++++Y +II G G
Sbjct: 416 MGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGN 475
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +L M++ GC PD +Y I +C ++ A GL +EMV+ GL PN TY
Sbjct: 476 TTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTA 535
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L ++ +L M +GC PN Q+ L+ +Q A +L M+E+G
Sbjct: 536 LIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEG 595
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
++ + D LC G A + F +MIE+G P+ +++ + + K E +
Sbjct: 596 IFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAE 655
Query: 241 NLSNKMALFGPSMIPKREEYLAEMSA 266
NL ++ G +IP Y+ + A
Sbjct: 656 NLFAELERHG--LIPDEITYVKMIEA 679
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 114/246 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G ++V+YN +I YC A +I++ MRD PD SYT +I G + +
Sbjct: 451 MLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISK 510
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A + EM + G P+ Y A I YC ++L A+ L++ M G PN TYN+
Sbjct: 511 MESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNV 570
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
N+ + L M+ G PN + ++ + +AL+++N M+E+G
Sbjct: 571 LIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQG 630
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+L L L GK+ EAE F E+ G P ++++ ++ ++ K E
Sbjct: 631 CLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAF 690
Query: 241 NLSNKM 246
N +M
Sbjct: 691 NFLGRM 696
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 117/278 (42%), Gaps = 36/278 (12%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV+P+++ YN +I+ CKD V A I++K+ + ++SPD +YTS+I G
Sbjct: 206 MLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHD 265
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMV------------- 107
D A V +M + GC P+ Y+ I C + R+ +A L+ EM+
Sbjct: 266 LDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTG 325
Query: 108 ----------------------EKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
KG PN TY S L+ + L+ RM G
Sbjct: 326 PIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDG 385
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
PNT + L+ + +++ A + N M G I+ + + C +G +A
Sbjct: 386 VFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAM 445
Query: 206 KSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNL 242
M+++GH + V++ IK + N AL+ L
Sbjct: 446 LVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRIL 483
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 106/253 (41%), Gaps = 30/253 (11%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G +P++ +YN LI K A ++ + M +E I P+V++YT++I GL G
Sbjct: 556 MKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGS 615
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A ++ +M E GC P+ Y++ IR ++ +A L E+ GL P+ TY
Sbjct: 616 TSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVK 675
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKR------------------ 162
+ S + ++N RM+ GC P + L+K K
Sbjct: 676 MIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPN 735
Query: 163 ---------QEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIE 213
Q+ V + + + E G + V + L L G+ EA + MI
Sbjct: 736 CSFGYQTTDQDAVSV---MSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMIS 792
Query: 214 KGHKPSQVSFRRI 226
+G P Q ++ +
Sbjct: 793 QGLCPDQEAYNSL 805
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 95/224 (42%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+ + G++ + +Y+ L+ + +M E + P+++ Y ++I L G
Sbjct: 171 LSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGN 230
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A ++K++ E PD Y + I +C L A + ++M ++G PN TY+
Sbjct: 231 VADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYST 290
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMF-LVKLCKRQEKVEIALQLWNDMVEK 179
S + +++L M+ G LP +C ++ LC E A +L+ DM K
Sbjct: 291 LINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCD-MGCYEDAWRLFVDMKNK 349
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G + L LC G L A F M G P+ V++
Sbjct: 350 GCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTY 393
>gi|359484268|ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Vitis vinifera]
Length = 641
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 112/213 (52%), Gaps = 2/213 (0%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
D S+N LI C+ +V+KA+++ +MR SPDVI+Y ++I G V + D+ D+L
Sbjct: 236 DSCSFNILIRGLCRIGKVDKAFELFNEMRGFGCSPDVITYNTLINGFCRVNEVDRGHDLL 295
Query: 69 KE-MKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
KE + + PD Y + I YC ++ AS L + M+ G+ PNA T+N+ F
Sbjct: 296 KELLSKNDLSPDVVTYTSIISGYCKLGKMEKASILFNNMISSGIKPNAFTFNILINGFGK 355
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
D+ S+ N+Y M+ GC P+ + L+ R KVE +L+LW+++ +
Sbjct: 356 VGDMVSAENMYEEMLLLGCPPDIITFTSLIDGHCRTGKVERSLKLWHELNARNLSPNEYT 415
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQ 220
+L + LC +L EA + FL ++ H +Q
Sbjct: 416 FAILTNALCKENRLHEA-RGFLRDLKWRHIVAQ 447
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 105/224 (46%), Gaps = 1/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIV-EKMRDEDISPDVISYTSIIGGLGLVG 59
MR G PD+++YN LI+ +C+ +V++ + ++ E + D+SPDV++YTSII G +G
Sbjct: 263 MRGFGCSPDVITYNTLINGFCRVNEVDRGHDLLKELLSKNDLSPDVVTYTSIISGYCKLG 322
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ +KA + M G P+A +N I + + A + +EM+ G P+ T+
Sbjct: 323 KMEKASILFNNMISSGIKPNAFTFNILINGFGKVGDMVSAENMYEEMLLLGCPPDIITFT 382
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ + S L+ + PN + L ++ ++ A D+ +
Sbjct: 383 SLIDGHCRTGKVERSLKLWHELNARNLSPNEYTFAILTNALCKENRLHEARGFLRDLKWR 442
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + + + D C G + EA EM EK KP ++++
Sbjct: 443 HIVAQPFMYNPVIDGFCKAGNVDEANVILAEMEEKRCKPDKITY 486
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 81/157 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G PDI+++ LID +C+ +VE++ K+ ++ ++SP+ ++ + L +
Sbjct: 369 MLLLGCPPDIITFTSLIDGHCRTGKVERSLKLWHELNARNLSPNEYTFAILTNALCKENR 428
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR L+++K YN I +C A + +A+ ++ EM EK P+ TY +
Sbjct: 429 LHEARGFLRDLKWRHIVAQPFMYNPVIDGFCKAGNVDEANVILAEMEEKRCKPDKITYTI 488
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV 157
L + +++ RM+GTGC P++ + L+
Sbjct: 489 LIIGHCMKGRLSEAISIFNRMLGTGCAPDSITMTSLI 525
Score = 43.9 bits (102), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E KPD ++Y LI +C ++ +A I +M +PD I+ TS+I L G
Sbjct: 474 MEEKRCKPDKITYTILIIGHCMKGRLSEAISIFNRMLGTGCAPDSITMTSLISCLLKAGM 533
Query: 61 PDKARDVLKEMKE 73
P++A +++ E
Sbjct: 534 PNEAYRIMQIASE 546
>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
Length = 567
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 128/235 (54%), Gaps = 14/235 (5%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD+V+Y+ LID +CK +VE+A +++ M P++++Y S++G L +G
Sbjct: 240 MSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGH 299
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN- 119
KA D+L EM+ G PD +YNA I C A+R++ A + D MVE+G +PNA++Y+
Sbjct: 300 IGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSM 359
Query: 120 LFFRVFYWS---------NDLRSSWNLYCRMMGTG-CLPNT-QSCMFLVKLCKRQEKVEI 168
L + ++ + L+ +++ C P+ + L CKR++ ++
Sbjct: 360 LIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQ-IDK 418
Query: 169 ALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
ALQ+ M+EK + ++ ++L LC +L +AE L M+++G P V++
Sbjct: 419 ALQIHKQMLEKNCCN-VVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTY 472
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 111/223 (49%), Gaps = 3/223 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G P+I +YN +++ C++R++++A K++E+M PDV++Y S I GL +
Sbjct: 138 MRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDR 197
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+AR L M PD +Y I C + L AS ++D M +G +P+ TY+
Sbjct: 198 VDEARKFLARMP---VTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSS 254
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F ++ + L M+ GC PN + L+ R + A + +M +G
Sbjct: 255 LIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRG 314
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
F ++ + D LC ++ +A+ F M+E+G P+ S+
Sbjct: 315 FTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSY 357
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 116/256 (45%), Gaps = 34/256 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+EMG PD YN LI Y K + +A+K + +M P V++YT+I+ GL +
Sbjct: 68 MKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAER 127
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +L EM++ GC P+ YN + C ++L +A +++EM +G P+ TYN
Sbjct: 128 TRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNS 187
Query: 121 FFR------------------------VFYW--------SNDLRSSWNLYCRMMGTGCLP 148
F + V Y S DL S+ + M GC P
Sbjct: 188 FIKGLCKCDRVDEARKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTP 247
Query: 149 NTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKS 207
+ + L+ CK E VE A+ L + M++ G ++ + L L +G + +AE
Sbjct: 248 DVVTYSSLIDGFCKGGE-VERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDM 306
Query: 208 FLEMIEKGHKPSQVSF 223
+EM +G P VS+
Sbjct: 307 LVEMERRGFTPDVVSY 322
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 97/208 (46%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
MG + ++ +YN L+ ++ + +KA + ++M D+ PD ++ ++ GL Q +K
Sbjct: 1 MGYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEK 60
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
AR +L MKE GC PD A YNA I Y AK A + EMV+ P TY
Sbjct: 61 ARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVD 120
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
+ R + L M GC PN + +V+ + K++ A ++ +M +G+
Sbjct: 121 GLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFP 180
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEM 211
++ + LC ++ EA K M
Sbjct: 181 DVVTYNSFIKGLCKCDRVDEARKFLARM 208
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 95/201 (47%), Gaps = 1/201 (0%)
Query: 44 DVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLM 103
+V +Y ++ L + DKA V +EM + C PDA + +R C + +L A L+
Sbjct: 6 NVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLL 65
Query: 104 DEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQ 163
M E G P+ YN + + D ++ M+ CLP + +V +
Sbjct: 66 GRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKA 125
Query: 164 EKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
E+ A++L ++M +KG I +V+ + LC+ KL EA+K EM +G+ P V++
Sbjct: 126 ERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTY 185
Query: 224 RR-IKALMELANKQEALQNLS 243
IK L + EA + L+
Sbjct: 186 NSFIKGLCKCDRVDEARKFLA 206
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 88/225 (39%), Gaps = 47/225 (20%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISP----------DVISYTS 50
M G PD+VSYN ID CK +V+KA + ++M + +P D++ YT
Sbjct: 310 MERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTV 369
Query: 51 IIGGLGLVG------------------------------------QPDKARDVLKEMKEY 74
++ GL G Q DKA + K+M E
Sbjct: 370 LLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEK 429
Query: 75 GCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSS 134
C + +N + C+ RL DA ++ MV++G P+ TY ++
Sbjct: 430 NCC-NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAA 488
Query: 135 WNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
L+ + GC+P+ + L+ + E A L+ +VE+
Sbjct: 489 LELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLVER 533
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 82/166 (49%), Gaps = 4/166 (2%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
+PD+ YN ++D +CK RQ++KA +I ++M +++ +V+++ ++ GL + + A
Sbjct: 397 EPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNCC-NVVTWNILVHGLCVDDRLSDAET 455
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
+L M + G PD Y + C + A L +E V+ G P+ TY+
Sbjct: 456 MLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLV 515
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFL---VKLCKRQEKVEIA 169
N ++ L+ +++ +P+ ++ L +KL + K E+
Sbjct: 516 HENMAEEAYLLFTKLVERRWVPDDKTLGLLHRKLKLLNKPRKAEVV 561
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G PD V+Y L+D CK + A ++ E+ PDV++Y+++I GL
Sbjct: 460 MVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENM 519
Query: 61 PDKARDVLKEMKEYGCYPD 79
++A + ++ E PD
Sbjct: 520 AEEAYLLFTKLVERRWVPD 538
>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
Length = 457
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 120/256 (46%), Gaps = 2/256 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P+ +Y L+ C+ ++ E+A + M + SP+V SY+ +I GL +
Sbjct: 43 MLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQK 102
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A ++L EM + G P+ Y + + C +L++A L MV +G P+ YN+
Sbjct: 103 VDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNV 162
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F D+ ++ L+ M+ GC+P + L+ R+ + L+ DM+ +G
Sbjct: 163 LIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQG 222
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
I + L D C MG +VEA + FLEM G P VS+ + M K Q
Sbjct: 223 CVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQ 282
Query: 241 NLSNKM--ALFGPSMI 254
L +M + GP ++
Sbjct: 283 RLLREMIRSGVGPDIV 298
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 101/226 (44%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G +P++V+Y L+ CK ++++A + +M PD + Y +I G G
Sbjct: 113 MIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGD 172
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + +EM E GC P YN+ + + L +M+ +G PN T+N
Sbjct: 173 MGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNN 232
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F D+ + L+ M GC P+ S L++ + K A +L +M+ G
Sbjct: 233 LLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSG 292
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G I+ ++L D G L A K F E+ + G +P S+ I
Sbjct: 293 VGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTI 338
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 117/224 (52%), Gaps = 12/224 (5%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P+I ++N L+D +CK + +A+++ +MR PDV+SY ++I G+ G+
Sbjct: 218 MLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGK 277
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
P +A+ +L+EM G PD +YN I Y + L A L E+ + GL P+A +Y+
Sbjct: 278 PHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYST 337
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + +++ ++ M+ G P+ + LV R E++ + +L+ MV+
Sbjct: 338 IIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVK-- 395
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKS------FLEMIEKGHKP 218
F L+ + ++LL M KL +A++S F E+ E+G P
Sbjct: 396 FECVPLIPE--YNLL--MYKLCKAKRSDDVCEIFHELTERGFSP 435
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 97/214 (45%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PD V YN LID + K + +AY++ E+M ++ P V +Y S++ G G+ +
Sbjct: 152 GCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRV 211
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ + K+M GC P+ +N + +C + +A L EM G P+ +YN R
Sbjct: 212 QSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRG 271
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ L M+ +G P+ S L+ + ++ A++L+ ++ + G
Sbjct: 272 MCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPD 331
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
+ D LC GK+ A F +MI G P
Sbjct: 332 AFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAP 365
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 98/213 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G P + +YN L+ + + + + + + M + P++ ++ +++ G +G
Sbjct: 183 MLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGD 242
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + EM+ GC PD +YN IR C + +A L+ EM+ G+ P+ +YN+
Sbjct: 243 MVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNI 302
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ S L + L+ + +G P+ S ++ R KV A ++ DM+ G
Sbjct: 303 LIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANG 362
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIE 213
V L LC +L E+ + F M++
Sbjct: 363 SAPDAAVVIPLVIGLCRGERLTESCELFQAMVK 395
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 59/126 (46%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G++PD SY+ +ID C+ +V A+ + + M +PD ++ GL + ++
Sbjct: 327 GLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTES 386
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++ + M ++ C P YN + C AKR D + E+ E+G SP+ +
Sbjct: 387 CELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILET 446
Query: 125 FYWSND 130
S+D
Sbjct: 447 LRRSDD 452
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 61/128 (47%), Gaps = 1/128 (0%)
Query: 117 TYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDM 176
+YN V S + Y M+ GC+PNT + +L++ + ++ E A ++ M
Sbjct: 19 SYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78
Query: 177 VEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANK 235
+G + +L LC K+ EA + EMI+ GH+P+ V++ + L ++
Sbjct: 79 AAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKL 138
Query: 236 QEALQNLS 243
+EA+ S
Sbjct: 139 KEAVDLFS 146
>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
Length = 1024
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 122/226 (53%), Gaps = 1/226 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+ +GV PD+ + + I K+ +V++A K+ +++++ + PDV +Y+S+I G G+
Sbjct: 604 LHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGE 663
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA ++ EM G P+ YNA + C + ++ A L D M EKGL P++ TY+
Sbjct: 664 VEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYST 723
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ S ++ +++L+ M G P++ LV C ++ +E A+ L+ +M++KG
Sbjct: 724 MIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG 783
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
F + L + L D C K+ EA + F EMI K P V++ +
Sbjct: 784 FAT-TLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTV 828
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 121/254 (47%), Gaps = 35/254 (13%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+KP++V Y+ LI Y + ++E+A ++++ M ++PD+ Y +II L G+ ++A
Sbjct: 468 GLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEA 527
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
L E++ G PDA + A I Y ++ +A+ DEM++ GL PN Y +
Sbjct: 528 STYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLING 587
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSC-MFLVKLCK---------------------- 161
+ + +L + +++ R+ G LP+ Q+C F+ L K
Sbjct: 588 HFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPD 647
Query: 162 ------------RQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFL 209
+Q +VE A +L ++M KG I + + L D LC G + A K F
Sbjct: 648 VFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFD 707
Query: 210 EMIEKGHKPSQVSF 223
M EKG +P V++
Sbjct: 708 GMPEKGLEPDSVTY 721
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 108/223 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G+KPD + + LID + ++ +++ +I + M I ++I+Y +I GL G+
Sbjct: 324 MQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGK 383
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA ++LK M GC P++ + I YC + A L+DEM ++ L P+A +Y
Sbjct: 384 MEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGA 443
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
DL + L +M +G PN L+ + ++E A +L + M G
Sbjct: 444 MINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSG 503
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I + + L GK+ EA LE+ +G KP V+F
Sbjct: 504 VAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTF 546
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 119/255 (46%), Gaps = 38/255 (14%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G++PD V+Y+ +ID YCK V +A+ + +M + + P Y +++ G G
Sbjct: 709 MPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGD 768
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY-- 118
+KA ++ +EM + G + ++N I YC + ++++AS L EM+ K + P+ TY
Sbjct: 769 MEKAMNLFREMLQKG-FATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTT 827
Query: 119 --------------NLFFR----------------VFYWSNDLRSS---WNLYCRMMGTG 145
NL F+ + Y N L S + L+ +M+ G
Sbjct: 828 VIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKG 887
Query: 146 CLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEA 204
P+ + + + CK VE A +L +++V KG + + D+L LC L EA
Sbjct: 888 VKPDEVTYGLVIYAHCKEDNLVE-AFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEA 946
Query: 205 EKSFLEMIEKGHKPS 219
K EM E G KPS
Sbjct: 947 SKLLDEMGELGLKPS 961
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 107/226 (47%), Gaps = 1/226 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ P+ Y LI+ + K + +A I ++ + PDV + ++ I GL G+
Sbjct: 569 MLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGR 628
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A V E+KE G PD Y++ I +C + A L DEM KG++PN YN
Sbjct: 629 VQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNA 688
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
S D++ + L+ M G P++ + ++ + E V A L+++M KG
Sbjct: 689 LVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKG 748
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ V + L C G + +A F EM++KG + +SF +
Sbjct: 749 VQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-ATTLSFNTL 793
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 106/214 (49%), Gaps = 2/214 (0%)
Query: 11 VSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKE 70
+S+N LID YCK ++++A ++ ++M + I PD ++YT++I G+ ++A + KE
Sbjct: 788 LSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKE 847
Query: 71 MKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSND 130
M+E D Y + + Y + + L ++MV KG+ P+ TY L ++
Sbjct: 848 MQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDN 907
Query: 131 LRSSWNLYCRMMGTGCLP-NTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSD 189
L ++ L ++G G L T + + LCKR++ E A +L ++M E G + +
Sbjct: 908 LVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTE-ASKLLDEMGELGLKPSLAACN 966
Query: 190 VLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
L + GK+ EA + F + G P +
Sbjct: 967 TLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTL 1000
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 101/223 (45%), Gaps = 2/223 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+KPD V++ I Y K ++ +A K ++M D + P+ YT +I G G +A
Sbjct: 538 GLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEA 597
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ + + G PD +A I R+++A + E+ EKGL P+ TY+
Sbjct: 598 LSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISG 657
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGS 183
F ++ ++ L+ M G PN LV LCK + ++ A +L++ M EKG
Sbjct: 658 FCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGD-IQRARKLFDGMPEKGLEP 716
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + D C + EA F EM KG +P + +
Sbjct: 717 DSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNAL 759
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%)
Query: 10 IVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLK 69
++ N L+ K +E +K+ M D + DV +YT ++G L G A+ VL
Sbjct: 193 LIRCNSLLKDLLKCGMMELFWKVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLI 252
Query: 70 EMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSN 129
EM E G P+ Y+ I C + +A L M EKGL PN TY + +
Sbjct: 253 EMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAK 312
Query: 130 DLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSD 189
+ + + M TG P+ +C L+ R+ ++ L++ + MV G ++ +
Sbjct: 313 RMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYN 372
Query: 190 VLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
VL LC GK+ +A + M+ G KP+ +F
Sbjct: 373 VLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTF 406
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 94/192 (48%), Gaps = 7/192 (3%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ PD V+Y +ID +CK ++E+A + ++M++ ++ D ++YTS++ G +GQ +
Sbjct: 818 IMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVF 877
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+ ++M G PD Y I +C L +A L DE+V KG+ T ++L
Sbjct: 878 ALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITAL 937
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
DL + L M G P+ +C LV+ K++ A +++ +G S
Sbjct: 938 CKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVF-----EGVKSLG 992
Query: 186 LVSD--VLFDLL 195
LV D L DL+
Sbjct: 993 LVPDTTTLIDLV 1004
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 109/244 (44%), Gaps = 1/244 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G KP+ ++ LI+ YC++ + +A +++++M ++ P +SY ++I GL
Sbjct: 394 MVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKD 453
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +L++M G P+ Y+ I Y R+ +A L+D M G++P+ YN
Sbjct: 454 LSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNA 513
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + + G G P+ + + + K+ A + +++M++ G
Sbjct: 514 IISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHG 573
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS-QVSFRRIKALMELANKQEAL 239
+ VL + G L+EA F + G P Q I L++ QEAL
Sbjct: 574 LMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEAL 633
Query: 240 QNLS 243
+ S
Sbjct: 634 KVFS 637
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 105/223 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+ P+ Y+ +I+ C+ +++A ++ M ++ + P+ +YT I GL +
Sbjct: 254 MDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKR 313
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A+ +EM++ G PD A +A I + + + + D MV G+ N TYN+
Sbjct: 314 MNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNV 373
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + M+ GC PN+++ L++ R+ + AL+L ++M ++
Sbjct: 374 LIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRN 433
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + + LC L A K +M G KP+ V +
Sbjct: 434 LVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVY 476
>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
Length = 457
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 120/256 (46%), Gaps = 2/256 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P+ +Y L+ C+ ++ E+A + M + SP+V SY+ +I GL +
Sbjct: 43 MLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQK 102
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A ++L EM + G P+ Y + + C +L++A L MV +G P+ YN+
Sbjct: 103 VDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNV 162
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F D+ ++ L+ M+ GC+P + L+ R+ + L+ DM+ +G
Sbjct: 163 LIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQG 222
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
I + L D C MG +VEA + FLEM G P VS+ + M K Q
Sbjct: 223 CVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQ 282
Query: 241 NLSNKM--ALFGPSMI 254
L +M + GP ++
Sbjct: 283 RLLREMIRSGVGPDIV 298
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 113/224 (50%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P++ SY+ LI C+ ++V++A +++ +M D P+V++Y S++ GL +G+
Sbjct: 78 MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGK 137
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A D+ M GC PD YN I + + +A L +EM+EKG P TYN
Sbjct: 138 LKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNS 197
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
F + +L+ M+ GC+PN + L+ CK + VE A +L+ +M
Sbjct: 198 LLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVE-AHRLFLEMRSL 256
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G ++ + L +C GK EA++ EMI G P VS+
Sbjct: 257 GCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSY 300
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 101/226 (44%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G +P++V+Y L+ CK ++++A + +M PD + Y +I G G
Sbjct: 113 MIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGD 172
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + +EM E GC P YN+ + + L +M+ +G PN T+N
Sbjct: 173 MGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNN 232
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F D+ + L+ M GC P+ S L++ + K A +L +M+ G
Sbjct: 233 LLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSG 292
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G I+ ++L D G L A K F E+ + G +P S+ I
Sbjct: 293 VGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTI 338
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 126/246 (51%), Gaps = 12/246 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P+I ++N L+D +CK + +A+++ +MR PDV+SY +++ G+ G+
Sbjct: 218 MLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGK 277
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
P +A+ +L+EM G PD +YN I Y + L A L E+ + GL P+A +Y+
Sbjct: 278 PHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYST 337
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + +++ ++ M+ G P+ + LV R E++ + +L+ MV+
Sbjct: 338 IIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVK-- 395
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKS------FLEMIEKGHKPSQVSFRRIKALMELAN 234
F L+ + ++LL M KL +A++S F E+ E+G P + I + ++
Sbjct: 396 FECVPLIPE--YNLL--MYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETLRRSD 451
Query: 235 KQEALQ 240
+EA +
Sbjct: 452 DKEAAE 457
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 97/214 (45%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PD V YN LID + K + +AY++ E+M ++ P V +Y S++ G G+ +
Sbjct: 152 GCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRV 211
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ + K+M GC P+ +N + +C + +A L EM G P+ +YN R
Sbjct: 212 QSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRG 271
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ L M+ +G P+ S L+ + ++ A++L+ ++ + G
Sbjct: 272 MCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPD 331
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
+ D LC GK+ A F +MI G P
Sbjct: 332 AFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAP 365
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 98/213 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G P + +YN L+ + + + + + + M + P++ ++ +++ G +G
Sbjct: 183 MLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGD 242
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + EM+ GC PD +YN +R C + +A L+ EM+ G+ P+ +YN+
Sbjct: 243 MVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNI 302
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ S L + L+ + +G P+ S ++ R KV A ++ DM+ G
Sbjct: 303 LIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANG 362
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIE 213
V L LC +L E+ + F M++
Sbjct: 363 SAPDAAVVIPLVIGLCRGERLTESCELFQAMVK 395
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 62/128 (48%), Gaps = 1/128 (0%)
Query: 117 TYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDM 176
+YN V S + Y M+G GC+PNT + +L++ + ++ E A ++ M
Sbjct: 19 SYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78
Query: 177 VEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANK 235
+G + +L LC K+ EA + EMI+ GH+P+ V++ + L ++
Sbjct: 79 AAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKL 138
Query: 236 QEALQNLS 243
+EA+ S
Sbjct: 139 KEAVDLFS 146
>gi|224030417|gb|ACN34284.1| unknown [Zea mays]
gi|413950072|gb|AFW82721.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
Length = 647
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 116/223 (52%), Gaps = 5/223 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ GV P++ +YN L+ C++ +V A K++++M + PD ++Y +I+ L + +
Sbjct: 154 MRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDR 213
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A +VL M P AA+YNA + C R+++ ++ +MV +GL PN TY
Sbjct: 214 LDEATEVLAAMP-----PVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTT 268
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + +LR + + RM+ TGC PN + LV+ +V AL +W MV +G
Sbjct: 269 IVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEG 328
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + ++L LC +G L A M + G P+ ++
Sbjct: 329 WAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTY 371
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 104/219 (47%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P SYN ++ C++ ++++ + +V M + P+VI+YT+I+ G+ A +
Sbjct: 226 PVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAI 285
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L M GC P+ + A +R R+ DA + MV +G +P+ +YN+ R
Sbjct: 286 LARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCS 345
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
DL+ + ++ M GC PN ++ L+ + + A+ +WNDM G ++V
Sbjct: 346 VGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVV 405
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ D+ C +A+ +M+ + P+ V+F +
Sbjct: 406 YTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTL 444
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 115/240 (47%), Gaps = 1/240 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G++P++++Y ++D +CK ++ A I+ +M +P+V+++T+++ GL G+ A
Sbjct: 258 GLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDA 317
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
D+ + M G P +YN IR C L+ AS +++ M + G PN TY+
Sbjct: 318 LDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDG 377
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
F + DL + +++ M +GC PN +V + ++ A L + M+ +
Sbjct: 378 FSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPN 437
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLS 243
+ + L LCD ++ A F EM G P+ ++ I L N +AL ++
Sbjct: 438 TVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVT 497
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 104/223 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G KP++V Y ++DV+CK +A +++KM E+ P+ +++ ++I L +
Sbjct: 394 MSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRR 453
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A V EM+ +GC P+ YN I DA ++ EM G+ + TYN
Sbjct: 454 VGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNT 513
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ R + +M+ G PN + ++ ++ +V +A + M
Sbjct: 514 VVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVN 573
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
ILV +L LC+ KLV+A L+M+ +G P+ V++
Sbjct: 574 CHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTW 616
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 93/222 (41%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G P VSYN LI C ++ A I+ M P+V +Y+++I G G A
Sbjct: 328 GWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGA 387
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ +M GC P+ Y + +C A L+D+M+ + PN T+N R
Sbjct: 388 ISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRS 447
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + ++ M GC+PN ++ L+ R+ AL + +M G
Sbjct: 448 LCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELS 507
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ + + LC EA +MI +G +P+ +F I
Sbjct: 508 LVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAI 549
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 61/126 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G++ +V+YN ++ C+ R +A V KM + I P+ ++++II G+
Sbjct: 499 MQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGE 558
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +L M C+ + Y + C +L DA + +M+ +G+ PN T+N+
Sbjct: 559 VRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNV 618
Query: 121 FFRVFY 126
R +
Sbjct: 619 LVRGVF 624
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 67/158 (42%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G P+ +YN LI ++ A +V +M+ I +++Y +++ GL
Sbjct: 464 MRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRM 523
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + +M G P+A ++A I YC +R A+ ++ M N Y +
Sbjct: 524 SREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTI 583
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK 158
+ L + +M+ G PNT + LV+
Sbjct: 584 LMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVR 621
>gi|115446773|ref|NP_001047166.1| Os02g0565400 [Oryza sativa Japonica Group]
gi|113536697|dbj|BAF09080.1| Os02g0565400, partial [Oryza sativa Japonica Group]
Length = 353
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 124/237 (52%), Gaps = 4/237 (1%)
Query: 21 CKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDA 80
CK ++A K++++MRD+ +PD+++Y ++ G+ G+ D A + LK + YGC P+
Sbjct: 3 CKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNT 62
Query: 81 AAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCR 140
+YN ++ C A+R DA LM EM +KG PN T+N+ + + + +
Sbjct: 63 VSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQ 122
Query: 141 MMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGK 200
+ GC PN+ S L+ +Q+K++ A+ + MV +G I+ + L LC G+
Sbjct: 123 IPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGE 182
Query: 201 LVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLSNKMALFG--PSMI 254
+ A + ++ +KG P +S+ I L + +EAL+ L N+M G P +I
Sbjct: 183 VDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALE-LLNEMVSKGLQPDII 238
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 116/228 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G PDIV+YN +++ C++ +V+ A + ++ + P+ +SY ++ GL +
Sbjct: 18 MRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAER 77
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A +++ EM + GC P+ +N I C + A +++++ + G +PN+ +YN
Sbjct: 78 WEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNP 137
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + + M+ GC P+ S L+ R +V++A++L + + +KG
Sbjct: 138 LLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKG 197
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKA 228
++ + + D L GK EA + EM+ KG +P +++ I A
Sbjct: 198 CAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAA 245
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 126/256 (49%), Gaps = 2/256 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G +P+ VSYN ++ C + E A +++ +M + P+V+++ +I L G + A
Sbjct: 57 GCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPA 116
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+VL+++ +YGC P++ +YN + +C K++ A +D MV +G P+ +YN
Sbjct: 117 LEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTA 176
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
S ++ + L ++ GC P S ++ + K + AL+L N+MV KG
Sbjct: 177 LCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPD 236
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSN 244
I+ + LC ++ +A ++F ++ + G +P+ V + I ++ L ++E +
Sbjct: 237 IITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAI--ILGLCKRRETHSAIDL 294
Query: 245 KMALFGPSMIPKREEY 260
+ G +P Y
Sbjct: 295 FAYMIGNGCMPNESTY 310
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 92/180 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PDIVSYN L+ C+ +V+ A +++ +++D+ +P +ISY ++I GL G+
Sbjct: 158 MVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGK 217
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++L EM G PD Y+ C R+ DA ++ + G+ PN YN
Sbjct: 218 TKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNA 277
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ S+ +L+ M+G GC+PN + L++ + ++ A L +++ +G
Sbjct: 278 IILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRG 337
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 103/223 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G P++V++N LI C+ VE A +++E++ +P+ +SY ++ +
Sbjct: 88 MGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKK 147
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA L M GCYPD +YN + C + + A L+ ++ +KG +P +YN
Sbjct: 148 MDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNT 207
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + L M+ G P+ + + R++++E A++ + + + G
Sbjct: 208 VIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMG 267
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + + LC + A F MI G P++ ++
Sbjct: 268 IRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTY 310
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 58/111 (52%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G++PDI++Y+ + C++ ++E A + K++D I P+ + Y +II GL +
Sbjct: 228 MVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRE 287
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGL 111
A D+ M GC P+ + Y I +++A L+DE+ +G+
Sbjct: 288 THSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGV 338
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+++MG++P+ V YN +I CK R+ A + M P+ +YT +I GL G
Sbjct: 263 VQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGL 322
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIR 88
+ARD+L E+ G + AIR
Sbjct: 323 IKEARDLLDELCSRGVVRKSLINKGAIR 350
>gi|242092396|ref|XP_002436688.1| hypothetical protein SORBIDRAFT_10g007070 [Sorghum bicolor]
gi|241914911|gb|EER88055.1| hypothetical protein SORBIDRAFT_10g007070 [Sorghum bicolor]
Length = 551
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 120/246 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G++PD+V+Y LI +CK + ++A K+ +M P Y +I GLG +
Sbjct: 296 MIDAGIRPDVVAYGMLISAFCKSGKCDEAIKVFYEMEASGCMPSPHVYCMLINGLGSEER 355
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A ++ K+ G + NA + YC A + A ++DEM E + PN+ TY++
Sbjct: 356 LDEALKYFEQYKKSGFPMEVPTCNAVVGAYCRASKFEHAFKMVDEMRECKIGPNSRTYDV 415
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
S ++N++ RM GC P + +V + +V++AL +W M E+G
Sbjct: 416 ILHYLIKSQKFEEAYNVFQRMGMDGCEPQLNTYTMMVGMFCSNGRVDMALNVWKQMGERG 475
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ + L + LC +L EA F EM++KG +P F +K + + Q
Sbjct: 476 VLPCMHMFSALINGLCFENRLEEACVYFQEMLDKGIRPPGQLFSNLKEALVEGGRISLAQ 535
Query: 241 NLSNKM 246
+++K+
Sbjct: 536 EMASKL 541
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 103/240 (42%), Gaps = 1/240 (0%)
Query: 12 SYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEM 71
++ ++ Y + R+V++A + EKM + ++ Y +I L Q KA+ + KEM
Sbjct: 201 TFKLIVRRYARARKVKEAVETFEKMSIFGLKTELSDYNWLIDTLSKSKQVKKAQAIYKEM 260
Query: 72 KEYGCY-PDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSND 130
K G + PD Y + + K L + EM++ G+ P+ Y + F S
Sbjct: 261 KRKGKFVPDLKTYTVLMEGWGHEKDLLMVKTMYQEMIDAGIRPDVVAYGMLISAFCKSGK 320
Query: 131 LRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDV 190
+ ++ M +GC+P+ L+ +E+++ AL+ + + GF + +
Sbjct: 321 CDEAIKVFYEMEASGCMPSPHVYCMLINGLGSEERLDEALKYFEQYKKSGFPMEVPTCNA 380
Query: 191 LFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFG 250
+ C K A K EM E P+ ++ I + + K E N+ +M + G
Sbjct: 381 VVGAYCRASKFEHAFKMVDEMRECKIGPNSRTYDVILHYLIKSQKFEEAYNVFQRMGMDG 440
>gi|357518651|ref|XP_003629614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523636|gb|AET04090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 592
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 110/216 (50%), Gaps = 2/216 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +MGV PD+ S N L+DV CK+ ++ +A ++ M PDV +Y S+I L Q
Sbjct: 277 MMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQ 336
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A V + M GC PD AY + I +C K + A L+DEM++ G +P+ T+
Sbjct: 337 MDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTT 396
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
F ++ L+ M G +PN Q+C ++ LCK Q E AL L++ M +
Sbjct: 397 LIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSE-ALSLFHAMEKS 455
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
I++ ++ D +C GKL A + F + KG
Sbjct: 456 NLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKG 491
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 109/219 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E P++V Y+ ++D CKD V +A + +M + I P++++YT +I GL G+
Sbjct: 207 MEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGR 266
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A +L EM + G PD + N + C ++ A ++ M+ G P+ TYN
Sbjct: 267 WKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNS 326
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ N + + ++ M+ GCLP+ + L+ + + + A+ L ++M++ G
Sbjct: 327 LIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVG 386
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
F ++ L C +G+ + A++ FL M + G P+
Sbjct: 387 FTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPN 425
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 120/256 (46%), Gaps = 2/256 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++G++P +V++ LI+ C V +A ++V+ + DV +Y +I GL +G+
Sbjct: 137 MLKLGLEPSVVTFTILINGLCVKGDVGRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGK 196
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A L++M+E P+ Y+ + C + +A GL EM KG+ PN TY
Sbjct: 197 TSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTC 256
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + +L MM G +P+ QS LV + ++ K+ A + M+ G
Sbjct: 257 LIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVG 316
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
+ + L D C ++ EA + F M+ +G P V++ I ++ N +A+
Sbjct: 317 EVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAM 376
Query: 240 QNLSNKMAL-FGPSMI 254
L + + F P ++
Sbjct: 377 HLLDEMIKVGFTPDVV 392
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 87/180 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PDIV+Y LI +CK + + KA ++++M +PDV+++T++IGG VG+
Sbjct: 347 MVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGR 406
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
P A+++ M +YG P+ + C ++ L +A L M + L N Y++
Sbjct: 407 PLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSI 466
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L ++ L+ + G N + ++ +Q ++ A L ++M E G
Sbjct: 467 ILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENG 526
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 103/225 (45%), Gaps = 4/225 (1%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
+G+KPD N +I+ C + V + ++ M + P V+++T +I GL + G +
Sbjct: 105 LGIKPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGR 164
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
A +++ +++ G D Y I C + +A G + +M E+ +PN Y+
Sbjct: 165 AVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMD 224
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPN--TQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
+ + L M G G PN T +C+ + LC E A L ++M++ G
Sbjct: 225 GLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCL-IQGLCNFGRWKE-AGSLLDEMMKMGV 282
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ ++L D+LC GK+++A+ MI G P ++ +
Sbjct: 283 MPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSL 327
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 96/220 (43%), Gaps = 4/220 (1%)
Query: 22 KDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMK-EYGCYPDA 80
K + +++A M + P VI +T ++G + + A ++KEM G PD
Sbjct: 52 KLKSIDEALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAISLVKEMHSSLGIKPDT 111
Query: 81 AAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCR 140
N I + C K + ++ M++ GL P+ T+ + D+ + L
Sbjct: 112 FILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVELVDH 171
Query: 141 MMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMG 199
+ TG + ++ L+ LCK + E A+ M E+ + ++V + D LC G
Sbjct: 172 VEKTGYRSDVKTYGVLINGLCKMGKTSE-AVGWLRKMEERNWNPNVVVYSTVMDGLCKDG 230
Query: 200 KLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEA 238
+ EA LEM KG KP+ V++ I+ L +EA
Sbjct: 231 LVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEA 270
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 60/117 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + + +IV Y+ ++D C ++ A ++ + + + +V +YT +I G G
Sbjct: 452 MEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGL 511
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
DKA D+L M+E GC PD+ YN ++ + + + + M +KG S +ATT
Sbjct: 512 LDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAEREIARSIKYLTMMRDKGFSVDATT 568
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 58/123 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G P++ + ++D CK + + +A + M ++ +++ Y+ I+ G+ G+
Sbjct: 417 MHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGK 476
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A ++ + G + AY I + L A L+ M E G P++ TYN+
Sbjct: 477 LNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNV 536
Query: 121 FFR 123
F +
Sbjct: 537 FVQ 539
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 83/195 (42%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++G PD+V++ LI +C+ + A ++ M P++ + I+ GL
Sbjct: 382 MIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQL 441
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + M++ + Y+ + C A +L A L + KGL N Y +
Sbjct: 442 LSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTI 501
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F L + +L M GC+P++ + V+ + ++ +++ M +KG
Sbjct: 502 MINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAEREIARSIKYLTMMRDKG 561
Query: 181 FGSYILVSDVLFDLL 195
F ++++ + L
Sbjct: 562 FSVDATTTEMIINYL 576
>gi|413950074|gb|AFW82723.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
Length = 643
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 116/223 (52%), Gaps = 5/223 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ GV P++ +YN L+ C++ +V A K++++M + PD ++Y +I+ L + +
Sbjct: 150 MRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDR 209
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A +VL M P AA+YNA + C R+++ ++ +MV +GL PN TY
Sbjct: 210 LDEATEVLAAMP-----PVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTT 264
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + +LR + + RM+ TGC PN + LV+ +V AL +W MV +G
Sbjct: 265 IVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEG 324
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + ++L LC +G L A M + G P+ ++
Sbjct: 325 WAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTY 367
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 104/219 (47%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P SYN ++ C++ ++++ + +V M + P+VI+YT+I+ G+ A +
Sbjct: 222 PVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAI 281
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L M GC P+ + A +R R+ DA + MV +G +P+ +YN+ R
Sbjct: 282 LARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCS 341
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
DL+ + ++ M GC PN ++ L+ + + A+ +WNDM G ++V
Sbjct: 342 VGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVV 401
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ D+ C +A+ +M+ + P+ V+F +
Sbjct: 402 YTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTL 440
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 115/240 (47%), Gaps = 1/240 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G++P++++Y ++D +CK ++ A I+ +M +P+V+++T+++ GL G+ A
Sbjct: 254 GLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDA 313
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
D+ + M G P +YN IR C L+ AS +++ M + G PN TY+
Sbjct: 314 LDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDG 373
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
F + DL + +++ M +GC PN +V + ++ A L + M+ +
Sbjct: 374 FSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPN 433
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLS 243
+ + L LCD ++ A F EM G P+ ++ I L N +AL ++
Sbjct: 434 TVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVT 493
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 104/223 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G KP++V Y ++DV+CK +A +++KM E+ P+ +++ ++I L +
Sbjct: 390 MSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRR 449
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A V EM+ +GC P+ YN I DA ++ EM G+ + TYN
Sbjct: 450 VGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNT 509
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ R + +M+ G PN + ++ ++ +V +A + M
Sbjct: 510 VVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVN 569
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
ILV +L LC+ KLV+A L+M+ +G P+ V++
Sbjct: 570 CHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTW 612
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 93/222 (41%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G P VSYN LI C ++ A I+ M P+V +Y+++I G G A
Sbjct: 324 GWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGA 383
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ +M GC P+ Y + +C A L+D+M+ + PN T+N R
Sbjct: 384 ISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRS 443
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + ++ M GC+PN ++ L+ R+ AL + +M G
Sbjct: 444 LCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELS 503
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ + + LC EA +MI +G +P+ +F I
Sbjct: 504 LVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAI 545
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 61/126 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G++ +V+YN ++ C+ R +A V KM + I P+ ++++II G+
Sbjct: 495 MQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGE 554
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +L M C+ + Y + C +L DA + +M+ +G+ PN T+N+
Sbjct: 555 VRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNV 614
Query: 121 FFRVFY 126
R +
Sbjct: 615 LVRGVF 620
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 67/158 (42%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G P+ +YN LI ++ A +V +M+ I +++Y +++ GL
Sbjct: 460 MRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRM 519
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + +M G P+A ++A I YC +R A+ ++ M N Y +
Sbjct: 520 SREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTI 579
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK 158
+ L + +M+ G PNT + LV+
Sbjct: 580 LMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVR 617
>gi|302755068|ref|XP_002960958.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
gi|300171897|gb|EFJ38497.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
Length = 479
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 113/256 (44%), Gaps = 33/256 (12%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ P V+Y LIDV+CK Q E AY +++ M SP V SY SII GL +
Sbjct: 127 MEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRK 186
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + +EMK GC PD YN I C+ +RL +A L+ MVE G P+ T+
Sbjct: 187 VDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQPDKITFTA 246
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLC------------------- 160
++ ++ ++ L+ M GC P+ + LV KLC
Sbjct: 247 LIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPALSVVRNYPACP 306
Query: 161 -------------KRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKS 207
R+ + A +L M +G ++ F L D + + A +
Sbjct: 307 EAVILYTPIFRELGRRRGFDRAARLLQKMARRGVPPNVVTYTAFFKGLGDWKEGMRAYRE 366
Query: 208 FLEMIEKGHKPSQVSF 223
F M+E+G +P V++
Sbjct: 367 FRRMLEQGIEPDMVAY 382
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 103/226 (45%), Gaps = 9/226 (3%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
KP+ +SY L+ C+ +++KA + +M E + PDV +Y +I L + +A +
Sbjct: 32 KPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIE 91
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
+ M E PD YN + C R+ A L M G++P+ TY VF
Sbjct: 92 FFETMPE----PDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFC 147
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+++ L M C P S C + LCK + KV+ A QL+ +M G
Sbjct: 148 KMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNR-KVDQAYQLFEEMKLAGCKPDR 206
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALME 231
+ + L LC +L EA+ M+E G +P +++F AL+E
Sbjct: 207 VTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQPDKITF---TALIE 249
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 100/216 (46%), Gaps = 6/216 (2%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD+ +YN +ID CK R++ +A + E M + PDV++Y +++GGL G+ +A +
Sbjct: 68 PDVFTYNVVIDTLCKARRISRAIEFFETMPE----PDVVTYNTLLGGLCKNGRVAQACSL 123
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
M+ G P Y I +C + A GL+ M + SP +Y
Sbjct: 124 FGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCK 183
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+ + ++ L+ M GC P+ + L+ LC +Q ++ A L MVE GF +
Sbjct: 184 NRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQ-RLHEAKDLLTVMVENGFQPDKI 242
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
L + LC ++ EA F M ++G P V+
Sbjct: 243 TFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVT 278
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 121/278 (43%), Gaps = 35/278 (12%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G KPD V+YN LI C +++ +A ++ M + PD I++T++I GL +
Sbjct: 197 MKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDR 256
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRD---------------------- 98
+A + + M + GC PD + + CI ++LR
Sbjct: 257 IKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPALSVVRNYPACPEAVILYTPIF 316
Query: 99 -----------ASGLMDEMVEKGLSPNATTYNLFFRVFY-WSNDLRSSWNLYCRMMGTGC 146
A+ L+ +M +G+ PN TY FF+ W +R ++ + RM+ G
Sbjct: 317 RELGRRRGFDRAARLLQKMARRGVPPNVVTYTAFFKGLGDWKEGMR-AYREFRRMLEQGI 375
Query: 147 LPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEK 206
P+ + LV + +++++A ++ M + G I+ + L C GK+ +
Sbjct: 376 EPDMVAYNVLVDGFCKADRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGE 435
Query: 207 SFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSN 244
M+ +G +P ++ + A + + + +A + N
Sbjct: 436 LLHTMVSRGRQPDVATWSTLVAGLFMVGQADAAYSFLN 473
>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein
[Arabidopsis lyrata subsp. lyrata]
gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 1164
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 106/223 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ PD + Y L+D +CK + A K +M DI+PDV++YT+II G +G
Sbjct: 765 MIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGD 824
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + EM G PD + + YC A ++DA + + M++ G SPN TY
Sbjct: 825 MVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTT 884
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
DL S+ L M G PN + +V + +E A++L + G
Sbjct: 885 LIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAG 944
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + L D C G++ +A++ EM+ KG +P+ V+F
Sbjct: 945 LNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTF 987
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 113/215 (52%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++G++P+I +YN +++ CK +E+A K+V + ++ D ++YT+++ G+
Sbjct: 905 MWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGE 964
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA+++L EM G P +N + +C+ L D L++ M+ KG++PNATT+N
Sbjct: 965 MDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNC 1024
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + N+L+++ +Y M G P+ ++ LVK ++ A L+ +M KG
Sbjct: 1025 LVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKG 1084
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
F + VL K VEA + F +M G
Sbjct: 1085 FSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDG 1119
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 118/241 (48%), Gaps = 1/241 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD++SY+ +I+ YC+ +++K +K++EKM+ + + P+ +Y SIIG L + +
Sbjct: 695 MELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICK 754
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + EM G PD Y + +C +R AS EM + ++P+ TY
Sbjct: 755 LAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTA 814
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F D+ + L+ M+ G P+ + L+ + ++ A ++ N M++ G
Sbjct: 815 IISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAG 874
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI-KALMELANKQEAL 239
++ L D LC G L A + EM + G +P+ ++ I L + N +EA+
Sbjct: 875 CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 934
Query: 240 Q 240
+
Sbjct: 935 K 935
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 96/193 (49%), Gaps = 4/193 (2%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ D V+Y L+D YCK +++KA +I+ +M + + P ++++ ++ G L G +
Sbjct: 944 GLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDG 1003
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+L M G P+A +N ++ YCI L+ A+ + +M +G+ P+ TY +
Sbjct: 1004 EKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKG 1063
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ +++ +W L+ M G G + + L+K +++K A ++++ M G +
Sbjct: 1064 HCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAA- 1122
Query: 185 ILVSDVLFDLLCD 197
+FD D
Sbjct: 1123 ---DKEIFDFFSD 1132
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 106/227 (46%), Gaps = 2/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G+KP+ +Y +I + C+ ++ +A + +M + I PD I YT+++ G G
Sbjct: 730 MKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGD 789
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A EM PD Y A I +C + +A L EM+ +GL P+ T+
Sbjct: 790 IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTE 849
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+ + ++ ++ ++ M+ GC PN + L+ LCK + ++ A +L ++M +
Sbjct: 850 LMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD-LDSANELLHEMWKI 908
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G I + + + LC G + EA K E G V++ +
Sbjct: 909 GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 955
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 89/184 (48%), Gaps = 2/184 (1%)
Query: 44 DVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLM 103
+V SY +I + +G+ ++A +L M+ G PD +Y+ I YC L L+
Sbjct: 668 NVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLI 727
Query: 104 DEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKR 162
++M +KGL PN+ TY + L + + M+G G LP+T LV CKR
Sbjct: 728 EKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKR 787
Query: 163 QEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
+ + A + + +M + +L + C +G +VEA K F EM+ +G +P ++
Sbjct: 788 GD-IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIIT 846
Query: 223 FRRI 226
F +
Sbjct: 847 FTEL 850
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 57/121 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ P+ ++NCL+ YC ++ A I + M + PD +Y +++ G
Sbjct: 1010 MLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARN 1069
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + +EMK G + Y+ I+ + K+ +A + D+M GL+ + ++
Sbjct: 1070 MKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAADKEIFDF 1129
Query: 121 F 121
F
Sbjct: 1130 F 1130
>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
Length = 768
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 125/246 (50%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G +PD +YN L++ CK + A ++V+ M + PD+ +Y S+I GL +G+ ++A
Sbjct: 303 GFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEA 362
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+L +M C P+A YNA I + C R+ +A+ + + KG+ P+ T+N +
Sbjct: 363 VKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQG 422
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
S++ +S+ +L+ M G GC P+ + L+ K+E AL L +M G
Sbjct: 423 LCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARN 482
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSN 244
+++ + L D C ++ EAE+ F EM +G V++ + + + + E L +
Sbjct: 483 VVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMD 542
Query: 245 KMALFG 250
+M + G
Sbjct: 543 QMIMEG 548
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 118/225 (52%), Gaps = 2/225 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G +PD +YN LID C R++E+A ++++M + +V+ Y ++I G +
Sbjct: 439 MKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKR 498
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A ++ EM+ G D+ YN I C +KR+ DA+ LMD+M+ +GL P+ TYN
Sbjct: 499 IEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNS 558
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
F + D++ + ++ M +GC P+ + L+ LCK +V++A +L + K
Sbjct: 559 LLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCK-AGRVQVASRLLRSIQMK 617
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
G + + L + EA + F EM++K P ++++
Sbjct: 618 GMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYK 662
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 114/222 (51%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ PDI +YN LI CK ++E+A KI+++M D SP+ ++Y +II L + D+A
Sbjct: 338 GLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEA 397
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++ + + G PD +N+ I+ C++ + A L +EM KG P+ TYN+
Sbjct: 398 TEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDS 457
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
S L + NL M GC N L+ + +++E A +++++M +G
Sbjct: 458 LCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRD 517
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + L D LC ++ +A + +MI +G +P + ++ +
Sbjct: 518 SVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSL 559
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 116/250 (46%), Gaps = 2/250 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P+ V+YN +I CK+ +V++A +I + + I PDV ++ S+I GL L A D+
Sbjct: 376 PNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDL 435
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
+EMK GC PD YN I + C +++L +A L+ EM G + N YN F
Sbjct: 436 FEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCK 495
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+ + + ++ M G ++ + L+ LCK ++VE A QL + M+ +G
Sbjct: 496 NKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCK-SKRVEDAAQLMDQMIMEGLRPDKF 554
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKM 246
+ L C G + +A M G P V++ + + + A + + L +
Sbjct: 555 TYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSI 614
Query: 247 ALFGPSMIPK 256
+ G + P
Sbjct: 615 QMKGMVLTPH 624
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 110/242 (45%), Gaps = 2/242 (0%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
++ D+ ++N LI CK QV A ++E+M +SPD ++T+I+ G G D A
Sbjct: 199 IRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGAL 258
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+ ++M EYGC N I +C R+ A + E V +G P+ TYN
Sbjct: 259 RIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGL 318
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + + M+ G P+ + L+ LCK E +E A+++ + MV +
Sbjct: 319 CKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGE-IEEAVKILDQMVSRDCSPN 377
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSN 244
+ + + LC ++ EA + + KG P +F + + L++ ++ +L
Sbjct: 378 AVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFE 437
Query: 245 KM 246
+M
Sbjct: 438 EM 439
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 112/257 (43%), Gaps = 47/257 (18%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G++PD +YN L+ +CK ++KA IV+ M +PD+++Y ++I GL G+ A
Sbjct: 548 GLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVA 607
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+L+ ++ G AYN I+ R +A L EM++K P+A TY + +R
Sbjct: 608 SRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYR- 666
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG---- 180
LC + A+ +M+E+G
Sbjct: 667 ---------------------------------GLCNGGGPIGEAVDFTVEMIERGNIPE 693
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
F S++++++ L L D LV+ ++MI + K S+ I+ +++ Q+AL
Sbjct: 694 FSSFVMLAEGLCTLSMD-DTLVK----LVDMIMEKAKFSEREISTIRGFLKIRKFQDALS 748
Query: 241 NLSNKMALFGPSMIPKR 257
L + M P+R
Sbjct: 749 TLGGIL----DDMYPRR 761
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 100/228 (43%), Gaps = 8/228 (3%)
Query: 3 EMGVKPDIVSYNCLIDVYC---KDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVG 59
E +KPD YN L++V K + VE A+ + + R I DV ++ +I L
Sbjct: 161 EYRIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRR---IRHDVSTFNILIKALCKAH 217
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
Q A +++EM YG PD + ++ Y L A + ++MVE G T N
Sbjct: 218 QVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVN 277
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVE 178
+ F + + + + G P+ + LV LCK + A+++ + M+
Sbjct: 278 VLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGH-AKHAMEVVDAMLL 336
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G I + L LC +G++ EA K +M+ + P+ V++ I
Sbjct: 337 GGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAI 384
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/241 (18%), Positives = 92/241 (38%), Gaps = 37/241 (15%)
Query: 37 RDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGC-------------------- 76
+ + P Y I+ LG G + R VL+EMK GC
Sbjct: 89 KQPNFVPSSSVYEEILRKLGKAGSFEYMRRVLEEMKLSGCEFDRGIFLIFVESYGKFELY 148
Query: 77 ----------------YPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
PD YN + A +L+ MV + + + +T+N+
Sbjct: 149 DEVVGIVKVMEDEYRIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNI 208
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ +R + + M G P+ + +++ ++ AL++ MVE G
Sbjct: 209 LIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYG 268
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
+ +VL + C G++ +A E + +G +P Q ++ + L ++ + + A+
Sbjct: 269 CPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAM 328
Query: 240 Q 240
+
Sbjct: 329 E 329
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 55/119 (46%), Gaps = 1/119 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PDIV+Y LI CK +V+ A +++ ++ + + +Y +I L +
Sbjct: 579 MTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNR 638
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCI-AKRLRDASGLMDEMVEKGLSPNATTY 118
+A + +EM + PDA Y R C + +A EM+E+G P +++
Sbjct: 639 THEAMRLFREMLDKSEPPDAITYKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSF 697
>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
Length = 796
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 131/283 (46%), Gaps = 35/283 (12%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKM-----------------------RDE 39
E G+ PD+++YN LID YCK V KA+ ++++M R E
Sbjct: 412 EEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYE 471
Query: 40 DIS------------PDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAI 87
D PD +SY +++ P+ A + +M E P + YN I
Sbjct: 472 DAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLI 531
Query: 88 RNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCL 147
+ C +RL++A ++E VEKGL P+ TTYN+ + DL +++ + +M+
Sbjct: 532 KGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFK 591
Query: 148 PNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKS 207
P+ +C L+ K++ AL+L+ VEKG ++ + L +C +G + A
Sbjct: 592 PDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHF 651
Query: 208 FLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFG 250
F +M KG +P ++ + + + A + E N+ +K+A G
Sbjct: 652 FDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSG 694
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 110/222 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ GVKP +V++N ++ CK+ ++E+A +EK+ +E ++PDVI+Y ++I G
Sbjct: 375 MRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGN 434
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA ++ EM G D N + N C KR DA L+ ++G P+ +Y
Sbjct: 435 VAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGT 494
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++ + + L+ +M+ +P+ + L+K R E+++ A+ N+ VEKG
Sbjct: 495 VMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKG 554
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
+++ C G L A + +M+E KP V+
Sbjct: 555 LVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVT 596
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 109/227 (48%), Gaps = 1/227 (0%)
Query: 1 MREMGVK-PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVG 59
M +G PD+V+YN L+D K R A +++E+MRD+ + P ++++ ++ L G
Sbjct: 339 MERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEG 398
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ ++A L+++ E G PD YN I YC A + A LMDEMV KGL + T N
Sbjct: 399 KLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLN 458
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ L G +P+ S ++ ++ E AL+LW+ M+E+
Sbjct: 459 TVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIER 518
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
I + L LC M +L EA E +EKG P + ++ I
Sbjct: 519 KLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNII 565
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 105/222 (47%), Gaps = 9/222 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G+ PD V+YN L++ +C+ + +A ++ +M+ + I+P +Y +++ +G
Sbjct: 234 MQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGW 293
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLS-PNATTYN 119
+A V++ M YG PD YN C A ++ +A L DEM G + P+ TYN
Sbjct: 294 IKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYN 353
Query: 120 LFFRV-FYW---SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWND 175
F W S+ LR L M G P + +VK ++ K+E AL
Sbjct: 354 TLVDACFKWRCSSDALR----LLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEK 409
Query: 176 MVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHK 217
+ E+G ++ + L D C G + +A EM+ KG K
Sbjct: 410 IAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLK 451
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 101/214 (47%), Gaps = 1/214 (0%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E G+ PD +YN +I YCK+ +E A++ KM + PDV++ +++ GL L G+ D
Sbjct: 552 EKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLD 611
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
KA + + E G D YN I++ C + A D+M KGL P+A TYN+
Sbjct: 612 KALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVL 671
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKV-EIALQLWNDMVEKGF 181
+ + N+ ++ +G L + +C L + V E + + EK
Sbjct: 672 SALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQ 731
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
+ + + LC G+L EA+ EM++KG
Sbjct: 732 DNALETYMERLNGLCTGGQLKEAKAVLDEMMQKG 765
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 104/226 (46%), Gaps = 3/226 (1%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E+ + P+ ++N L+ +C + A + M+ +SPD ++Y +++ G
Sbjct: 201 ELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLG 260
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
+AR +L MK G P YN + + ++ A+ +++ M G P+ TYN+
Sbjct: 261 EARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLA 320
Query: 123 RVFYWSNDLRSSWNLYCRM--MGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + ++ L M +GT LP+ + LV C + AL+L +M +KG
Sbjct: 321 MGLCQAGKVDEAFRLKDEMERLGTA-LPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKG 379
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ +++ LC GKL EA ++ E+G P +++ +
Sbjct: 380 VKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTL 425
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 104/230 (45%), Gaps = 3/230 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G+ P +YN L+ + + +++A K+VE M PD+ +Y + GL G+
Sbjct: 269 MKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGK 328
Query: 61 PDKARDVLKEMKEYG-CYPDAAAYNAAIRNYCIAKRLR-DASGLMDEMVEKGLSPNATTY 118
D+A + EM+ G PD YN + + C R DA L++EM +KG+ P T+
Sbjct: 329 VDEAFRLKDEMERLGTALPDVVTYNTLV-DACFKWRCSSDALRLLEEMRDKGVKPTLVTH 387
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
N+ + L + ++ G P+ + L+ + V A L ++MV
Sbjct: 388 NIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVG 447
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKA 228
KG + + LC M + +AE+ ++G P +VS+ + A
Sbjct: 448 KGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMA 497
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 77/191 (40%), Gaps = 3/191 (1%)
Query: 17 IDVYCKDRQVEKAYKIVEKMRDE-DISPDVISYTSIIGGLGLVGQ--PDKARDVLKEMKE 73
+ Y + R A +++ +R + P + + +++ L P + DV + + E
Sbjct: 142 LSAYARLRLPHLAAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIE 201
Query: 74 YGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRS 133
+P+ +N + +C L DA + M GLSP+A TYN L
Sbjct: 202 LRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGE 261
Query: 134 SWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFD 193
+ L RM G P + LV R ++ A ++ M GF + +VL
Sbjct: 262 ARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAM 321
Query: 194 LLCDMGKLVEA 204
LC GK+ EA
Sbjct: 322 GLCQAGKVDEA 332
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 56/110 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E KPD+V+ N L++ C +++KA K+ E ++ DVI+Y ++I + VG
Sbjct: 585 MVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGD 644
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKG 110
D A +M+ G PDA YN + A R +A ++ ++ + G
Sbjct: 645 VDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSG 694
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 36/152 (23%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E G K D+++YN LI CK V+ A + M + + PD +Y ++ L G+ +
Sbjct: 622 EKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSE 681
Query: 63 KARDVLKEM-------------------------KEYGCYPDA----AAYNAAIRNY--- 90
+A ++L ++ KE+ P+A A + A+ Y
Sbjct: 682 EAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNALETYMER 741
Query: 91 ----CIAKRLRDASGLMDEMVEKGLSPNATTY 118
C +L++A ++DEM++KG+ + +TY
Sbjct: 742 LNGLCTGGQLKEAKAVLDEMMQKGMPVDCSTY 773
>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
Length = 440
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 123/240 (51%), Gaps = 4/240 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G +P++ +YN LID K+ +V +A+++ + + PD I+YT I GL G+ + A
Sbjct: 178 GYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDA 237
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+LK+M E GC PD ++NA I C KR+ +A L+ M KG SPNA ++N
Sbjct: 238 LLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICG 297
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCK-RQE-KVEIALQLWNDMVEKGF 181
+ + + + M+ G P + LV LCK RQE +++ A+ L++ M+EKG
Sbjct: 298 QCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGR 357
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQ 240
++ L D L GKL +A + M KG P+ ++ I L L EAL+
Sbjct: 358 VPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALE 417
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 96/183 (52%), Gaps = 3/183 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G PD+VS+N +I+ CK+++V++A ++ M + SP+ IS+ ++I G G+
Sbjct: 244 MDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGK 303
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAK---RLRDASGLMDEMVEKGLSPNATT 117
KA KEM + G P YN + C A+ R+++A L D M+EKG P+ T
Sbjct: 304 WKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVT 363
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
Y+ + L + L M GC+PN + L+ EKV+ AL+L+ MV
Sbjct: 364 YSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMV 423
Query: 178 EKG 180
EKG
Sbjct: 424 EKG 426
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 121/246 (49%), Gaps = 5/246 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G P+ ++YN L+ C ++ A + E+M SPDV++Y +++ G VG+
Sbjct: 1 MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + + G PD YNA I +C A +L +A ++ MV + L P+ TYN
Sbjct: 61 LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+ + + L ++ G PN + L+ LC+ V AL+L+ ++++
Sbjct: 121 LVNGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQ 177
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEA 238
G+ + ++L D L ++ EA + F +++ G +P +++ I L + ++A
Sbjct: 178 GYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDA 237
Query: 239 LQNLSN 244
L L +
Sbjct: 238 LLMLKD 243
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 117/246 (47%), Gaps = 4/246 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKD-RQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
G P++++Y+ LI C++ R V +A K+ + + P+V +Y +I GL + ++
Sbjct: 142 GFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNE 201
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
A ++ + ++G PDA Y I C A R+ DA ++ +M EKG P+ ++N
Sbjct: 202 AFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVIN 261
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
+ + L M GC PN S L+ R K + A+ + +M+++G
Sbjct: 262 GLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKP 321
Query: 184 YILVSDVLFDLLCDM---GKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
++ ++L D LC G++ EA F MIEKG P V++ + + A K + +
Sbjct: 322 TVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDAR 381
Query: 241 NLSNKM 246
L M
Sbjct: 382 RLLGAM 387
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 73/122 (59%), Gaps = 3/122 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQ---VEKAYKIVEKMRDEDISPDVISYTSIIGGLGL 57
M + GVKP +V+YN L+D CK RQ +++A + + M ++ PDV++Y+++I GLG
Sbjct: 314 MLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGK 373
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
G+ D AR +L M+ GC P+ YN+ I C +++ +A L MVEKG P+ T
Sbjct: 374 AGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTIT 433
Query: 118 YN 119
Y
Sbjct: 434 YG 435
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 48/87 (55%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G PD+V+Y+ LID K +++ A +++ M + P+V +Y S+I GL + +
Sbjct: 352 MIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEK 411
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAI 87
D+A ++ M E GC PD Y I
Sbjct: 412 VDEALELFVAMVEKGCVPDTITYGTII 438
>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
Length = 609
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 122/245 (49%), Gaps = 5/245 (2%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
+PD+ SYN +I +C + A +++E+M+ +PD ++T II + G D A D
Sbjct: 109 EPDVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMD 168
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
L+ M GC P+ Y A I + AK+L +A L++EM E+G PN TYN+
Sbjct: 169 HLRSM---GCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALC 225
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ + ++ ++ +M+ G PN + LV CKR V+ A +L MV KG +
Sbjct: 226 KLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRG-NVDDARKLLGIMVAKGMRPNV 284
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNK 245
+ L D LC K +EA++ EM +G P ++ + + A+K E + + +
Sbjct: 285 VTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRR 344
Query: 246 MALFG 250
MA G
Sbjct: 345 MAGSG 349
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 121/240 (50%), Gaps = 3/240 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+R MG P++V+Y LI + + +++E+A K++E+MR+ P++++Y ++ L +
Sbjct: 170 LRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSM 229
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A+DV+K+M E G P+ +N+ + +C + DA L+ MV KG+ PN TY+
Sbjct: 230 VGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSA 289
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
S + + M G P+ + L+ LCK +K+E A Q+ M
Sbjct: 290 LIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCK-ADKIEEAEQMLRRMAGS 348
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEA 238
G ++V + C GKL+EA+K+ EM ++ P V++ I L +L EA
Sbjct: 349 GCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEA 408
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 119/228 (52%), Gaps = 3/228 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MRE G P++V+YN L+D CK V A +V+KM + +P+V+++ S++ G G
Sbjct: 205 MRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGN 264
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D AR +L M G P+ Y+A I C +++ +A +++EM +G++P+A TY+
Sbjct: 265 VDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSA 324
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
++ + + + RM G+GC P+ ++ CK + +E A + +M ++
Sbjct: 325 LIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLE-AQKTLQEMRKQ 383
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHK-PSQVSFRRI 226
++ + + D LC +GK+ EA+ +M E G P V++ +
Sbjct: 384 RKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTV 431
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 121/250 (48%), Gaps = 7/250 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ GV PD +Y+ LI CK ++E+A +++ +M +PDV+ Y+SII G+
Sbjct: 310 MKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGK 369
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKG-LSPNATTYN 119
+A+ L+EM++ PD YN I C ++ +A ++++M E G + P+ TY+
Sbjct: 370 LLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYS 429
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCK--RQEKVEIALQLWNDM 176
S+ L + L RM GC P+ + ++ LCK R E+ E LQ M
Sbjct: 430 TVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQ---GM 486
Query: 177 VEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQ 236
G ++ L LC K+ EAE+ EM G P+ V++ + + ++ +
Sbjct: 487 KRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRI 546
Query: 237 EALQNLSNKM 246
+ Q L +M
Sbjct: 547 KEAQQLVQRM 556
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 93/179 (51%), Gaps = 3/179 (1%)
Query: 1 MREMG-VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVG 59
M+E G V PD+V+Y+ +I+ CK + +A K++++M +PDV++YT+II GL G
Sbjct: 415 MQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCG 474
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ ++A +L+ MK GC P+ Y I C A+++ +A +M+EM G PN TYN
Sbjct: 475 RLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYN 534
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMG--TGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDM 176
S ++ + L RM C P+ + +V + V+ A QL M
Sbjct: 535 TMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 593
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 90/219 (41%), Gaps = 3/219 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G S+N L+ V + ++ +A + PDV SY +I G G A
Sbjct: 72 GFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAA 131
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++L+EMK G PDA + I A D G MD + G PN TY
Sbjct: 132 LELLEEMKSAGFAPDAFTHTPIITAMANAG---DLDGAMDHLRSMGCDPNVVTYTALIAA 188
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
F + L + L M GC PN + LV + V A + M+E GF
Sbjct: 189 FARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPN 248
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + L D C G + +A K M+ KG +P+ V++
Sbjct: 249 VMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTY 287
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 89/185 (48%), Gaps = 3/185 (1%)
Query: 42 SPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASG 101
S S+ S++ L + +A D+ + C PD +YN I +C A L A
Sbjct: 74 SHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAALE 133
Query: 102 LMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCK 161
L++EM G +P+A T+ + DL + + + R M GC PN + L+
Sbjct: 134 LLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMD-HLRSM--GCDPNVVTYTALIAAFA 190
Query: 162 RQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQV 221
R +K+E A++L +M E+G ++ +VL D LC + + A+ +MIE G P+ +
Sbjct: 191 RAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVM 250
Query: 222 SFRRI 226
+F +
Sbjct: 251 TFNSL 255
>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
Length = 1056
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 115/223 (51%), Gaps = 3/223 (1%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E G +P++V+Y+ LID K ++++A +++ KM + + ++Y++++ GL VG+ +
Sbjct: 536 ERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRME 595
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
A VL++M++ GC PDA YN I + +RLR+A GL+ EM+E G P+ TY
Sbjct: 596 DAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLC 655
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMV-EKG 180
S + + M GC PN + +V LCK E AL + M ++
Sbjct: 656 HGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTE-ALGYFEKMARDEV 714
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+++ L D LC G++ EA + MI G P V+F
Sbjct: 715 VAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTF 757
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 101/221 (45%), Gaps = 10/221 (4%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
R+ V P +++Y+ LID CK ++++AY+ +E+M PDV++++ +I GL G+
Sbjct: 711 RDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRI 770
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
D ++ M E GC D AYNA I YC+ A L++EM G++ N T+ +
Sbjct: 771 DTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIV 830
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
+ ND Y + C + L + + E AL+L MV G
Sbjct: 831 IKAL-CGNDRIDEAVSYFHSIPEDCRDEISYNTLITSLVASR-RSEQALELLRAMVADGG 888
Query: 182 G----SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
+Y+ V D LF G A K EM +GH P
Sbjct: 889 SPDACNYMTVMDGLF----KAGSPEVAAKLLQEMRSRGHSP 925
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 104/221 (47%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
+ G +P +V+Y+ +ID C+D +V+K K++E+M +P+ ++Y +++ L G+
Sbjct: 29 QFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRAK 88
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
+A +L+ M GC P+ + I+ C + A ++DEMV++G P+ + +
Sbjct: 89 EAFSLLERMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMVDRGFVPDVEIHTVLL 148
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
+ +W + +++ G P+ + +V + ++E A + + E
Sbjct: 149 HALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSS 208
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + D L G L A + F M + G P+ V++
Sbjct: 209 PTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTY 249
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 123/277 (44%), Gaps = 24/277 (8%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRD-EDISPDVISYTSIIGGLGLVGQ 60
R G P++V+++ LI C +V +A+++ E+M E ISP+ +Y ++ GL G
Sbjct: 373 RTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGD 432
Query: 61 PDKARDVLKEMKEYG---------------------CYPDAAAYNAAIRNYCIAKRLRDA 99
+ ++M E C P YN + + +RDA
Sbjct: 433 SRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDA 492
Query: 100 SGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKL 159
GL++ M+E GLSP+ T+N + + N++ R + GC PN + L+
Sbjct: 493 LGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDG 552
Query: 160 CKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
+ K++ ALQL MVE G + + + D L +G++ +A +M + G P
Sbjct: 553 LSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPD 612
Query: 220 QVSFRR-IKALMELANKQEALQNLSNKM-ALFGPSMI 254
V++ I + +EA+ L + A F PS++
Sbjct: 613 AVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVV 649
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 104/220 (47%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
+P +V+YN L+ K V A ++E M + +SPDVI++ S++ GL + A +
Sbjct: 470 RPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHN 529
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
V K E GC P+ Y+ I ++ +A L+ +MVE G N TY+
Sbjct: 530 VFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLL 589
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+ + + +M GCLP+ + L+ +++++ A+ L +M+E GF ++
Sbjct: 590 KVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVV 649
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
L LC G+ EA + M +G P+ +++ I
Sbjct: 650 TYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSI 689
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 95/195 (48%), Gaps = 2/195 (1%)
Query: 45 VISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMD 104
+++Y +I GL G+ A ++ ++G P Y+ I C + L++
Sbjct: 1 MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60
Query: 105 EMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQ 163
EM +G +PNA TYN + +++L RM GC P + ++K LCK
Sbjct: 61 EMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEG 120
Query: 164 EKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
E +E A ++ ++MV++GF + + VL LC++G++ EA F +++ G P V++
Sbjct: 121 E-IEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTY 179
Query: 224 RRIKALMELANKQEA 238
+ + A + EA
Sbjct: 180 NTMVDGLYKAGRLEA 194
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 87/179 (48%), Gaps = 1/179 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKM-RDEDISPDVISYTSIIGGLGLVG 59
M G P+ ++Y+ ++D CK +V +A EKM RDE ++P VI+Y+++I GL G
Sbjct: 674 MAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAG 733
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ D+A + L+ M G PD ++ I C A R+ L M E+G + YN
Sbjct: 734 RIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYN 793
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
+ + +++ L M G NT + ++K ++++ A+ ++ + E
Sbjct: 794 AMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPE 852
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 96/204 (47%), Gaps = 3/204 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P+++++ +I CK+ ++E A+++V++M D PDV +T ++ L +G+
Sbjct: 97 MAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGR 156
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A +++ G PDA YN + A RL A ++ + E SP T+ +
Sbjct: 157 VDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTI 216
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ +L ++ + M TG PNT + L+ + K++IAL L D K
Sbjct: 217 AVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIALGLLRD---KN 273
Query: 181 FGSYILVSDVLFDLLCDMGKLVEA 204
+ + L LC +L EA
Sbjct: 274 SQAGMFAFSSLLHGLCQAHRLEEA 297
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 83/172 (48%), Gaps = 5/172 (2%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
D +SYN LI R+ E+A +++ M + SPD +Y +++ GL G P+ A +L
Sbjct: 856 DEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLL 915
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
+EM+ G PD Y I AK+L A +EM+ K L P+A Y+ F +
Sbjct: 916 QEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKA 975
Query: 129 NDLRSSWNLYCRMMGTGCLPN-TQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ + +W L + +G P T + LCK + + AL++ +M K
Sbjct: 976 DKVDDAWKL---LRSSGIEPTITMYSTMVDSLCKNR-GTDKALEVIREMKSK 1023
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/307 (21%), Positives = 131/307 (42%), Gaps = 62/307 (20%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+R+ + + +++ L+ C+ ++E+A ++++ M P+V+ + S++ GL +
Sbjct: 269 LRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKAM---PCVPNVVCFNSLMNGLCQARR 325
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVE-KGLSPNATTYN 119
D+A ++ MKE GC D YN ++ C +R+ +A ++ M +G SPN T++
Sbjct: 326 VDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFS 385
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGT-GCLPNTQSCMFLVK-LCKRQEKVEI--------- 168
+ + + +W +Y RM+ G PN + FL++ LCK + +
Sbjct: 386 TLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLE 445
Query: 169 --------------------------ALQLWNDMV--------------------EKGFG 182
L +N +V E G
Sbjct: 446 REWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLS 505
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQN 241
++ + + D LC ++++A F +E+G +P+ V++ I L ++A EALQ
Sbjct: 506 PDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQL 565
Query: 242 LSNKMAL 248
L+ + L
Sbjct: 566 LAKMVEL 572
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 99/240 (41%), Gaps = 21/240 (8%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDED---------------------ISP 43
G+ P+ +Y L++ CK + + E+M + + P
Sbjct: 412 GISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRP 471
Query: 44 DVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLM 103
+++Y +++ GL G A +L+ M E G PD +N+ + C +R+ DA +
Sbjct: 472 TLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVF 531
Query: 104 DEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQ 163
+E+G PN TY+ + + L +M+ GC NT + +V +
Sbjct: 532 KRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKV 591
Query: 164 EKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++E A+ + M + G + + L D +L EA EM+E G PS V++
Sbjct: 592 GRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTY 651
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 117/260 (45%), Gaps = 12/260 (4%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
+G PD V+YN ++D K ++E A +++ + + SP V ++T + GL G
Sbjct: 170 IGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTG 229
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
A + M + G P+ Y+A I C A +L A GL+ + K ++
Sbjct: 230 AYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIALGLLRD---KNSQAGMFAFSSLLH 286
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
++ L + L + C+PN L+ + +V+ A +L++ M E G +
Sbjct: 287 GLCQAHRLEEAIQL---LKAMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSA 343
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEK--GHKPSQVSFRR-IKALMELANKQEALQ 240
++ ++L LC + ++ EA + +E++ + G P+ V+F I+ L +A +
Sbjct: 344 DVITYNILLKGLCKLRRIPEAYRH-VELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWE 402
Query: 241 NLSNKMALFGPSMIPKREEY 260
+A+ G S P R Y
Sbjct: 403 VYERMVAVEGIS--PNRFTY 420
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 92/206 (44%), Gaps = 2/206 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G K DI +YN +I+ YC + AY ++E+M+ I+ + +++ +I L +
Sbjct: 780 MAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDR 839
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + E C D +YN I + ++R A L+ MV G SP+A Y
Sbjct: 840 IDEAVSYFHSIPE-DCR-DEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMT 897
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + L M G P+ ++ ++ + +++ +A + +M+ K
Sbjct: 898 VMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKN 957
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEK 206
+V L D C K+ +A K
Sbjct: 958 LKPDAIVYSSLIDAFCKADKVDDAWK 983
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 75/172 (43%), Gaps = 3/172 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PD +Y ++D K E A K++++MR SPD+ +YT +I GL Q A
Sbjct: 887 GGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLA 946
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
D +EM PDA Y++ I +C A ++ DA L+ G+ P T Y+
Sbjct: 947 CDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDAWKLLR---SSGIEPTITMYSTMVDS 1003
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDM 176
+ + + M C P L + +V+ A++L ND+
Sbjct: 1004 LCKNRGTDKALEVIREMKSKNCEPGIHIWTSLATAYVAEGRVDEAVKLVNDL 1055
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 51/114 (44%), Gaps = 3/114 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G PD+ +Y +I K +Q+ A E+M +++ PD I Y+S+I +
Sbjct: 918 MRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAF---CK 974
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPN 114
DK D K ++ G P Y+ + + C + A ++ EM K P
Sbjct: 975 ADKVDDAWKLLRSSGIEPTITMYSTMVDSLCKNRGTDKALEVIREMKSKNCEPG 1028
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 43/72 (59%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+R G++P I Y+ ++D CK+R +KA +++ +M+ ++ P + +TS+ G+
Sbjct: 985 LRSSGIEPTITMYSTMVDSLCKNRGTDKALEVIREMKSKNCEPGIHIWTSLATAYVAEGR 1044
Query: 61 PDKARDVLKEMK 72
D+A ++ +++
Sbjct: 1045 VDEAVKLVNDLQ 1056
>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 114/211 (54%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G++ +I +YN +++ CK + +A K++E+M++ + PD I+YT+++ G+ KA
Sbjct: 350 GLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKA 409
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
R++L+EM + G P +N + C++ +L D L+ M+EKG+ PNA TYN +
Sbjct: 410 RELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQ 469
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ N++R S +Y M G +P++ + L+K + ++ A L +MVEK F
Sbjct: 470 YCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLT 529
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
+ L KL+EA + F EM +G
Sbjct: 530 ASSYNALIKGFFKRKKLLEARQLFEEMRREG 560
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 115/227 (50%), Gaps = 5/227 (2%)
Query: 1 MREM---GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGL 57
+REM GV PD V Y LID +CK + AYK+ +M +I PD I+++++I GL
Sbjct: 203 LREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSG 262
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
G+ +A + EM + G PD Y A I YC ++ A L ++MV+ GL+PN T
Sbjct: 263 SGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVT 322
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDM 176
Y S +L ++ L M G N + +V LCK ++ A++L +M
Sbjct: 323 YTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQ-AVKLMEEM 381
Query: 177 VEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
E G + L D G++V+A + EM+++G +P+ V+F
Sbjct: 382 KEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTF 428
Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 117/227 (51%), Gaps = 2/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G+KP++ +Y+ +I + CK +V + K++ +M + PD + YT++I G +G
Sbjct: 171 MQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGN 230
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A + EM+ PD+ A++A I + ++ +A L +EM++KG P+ TY
Sbjct: 231 TQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTA 290
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+ +++ ++ L+ +M+ G PN + L LCK E ++ A +L ++M K
Sbjct: 291 LIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGE-LDTANELLHEMCRK 349
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G I + + + LC G +++A K EM E G P +++ +
Sbjct: 350 GLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTL 396
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 110/198 (55%), Gaps = 4/198 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E G+ PD ++Y L+D Y K ++ KA +++ +M D + P V+++ ++ GL + G+
Sbjct: 381 MKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGK 440
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ +LK M E G P+AA YN+ ++ YCI +R ++ + M +G+ P++ TYN+
Sbjct: 441 LEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNI 500
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + +++ +W L+ M+ S L+K +++K+ A QL+ +M +G
Sbjct: 501 LIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREG 560
Query: 181 FGSYILVSDVLFDLLCDM 198
++ S +++L DM
Sbjct: 561 ----LVASAEIYNLFVDM 574
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 108/226 (47%), Gaps = 35/226 (15%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G +PD V+Y LID YCK +++KA+ + +M ++P+V++YT++ GL G+
Sbjct: 276 MIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGE 335
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A ++L EM G + + YN + C A + A LM+EM E GL P+ TY
Sbjct: 336 LDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTT 395
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+Y + + +VK A +L +M+++G
Sbjct: 396 LMDAYYKTGE-------------------------MVK----------ARELLREMLDRG 420
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ +VL + LC GKL + E+ M+EKG P+ ++ I
Sbjct: 421 LQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSI 466
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 117/221 (52%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
++GV + SYN L++ + ++ +A+ ++ +M + PDV+SYT+II G VG+
Sbjct: 103 QLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQ 162
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
K ++KEM+ G P+ Y++ I C + ++ + ++ EM+++G+ P+ Y
Sbjct: 163 KVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLI 222
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
F + ++++ L+ M +P++ + L+ KV A +L+N+M++KGF
Sbjct: 223 DGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFE 282
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ L D C +G++ +A +M++ G P+ V++
Sbjct: 283 PDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTY 323
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 86/190 (45%), Gaps = 8/190 (4%)
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLM----DEMVEKGLSPN 114
G ++AR ++ YG A + N + C++ + RD G++ E + G+ N
Sbjct: 53 GLLNEARKFFDKLLNYGVALSAGSCNLYLT--CLSSK-RDMLGMVLKVFSEFPQLGVCWN 109
Query: 115 ATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWN 174
+YN+ + +R + +L RM GC+P+ S ++ +++ +QL
Sbjct: 110 TESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVK 169
Query: 175 DMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELA 233
+M KG + + LLC GK+VE EK EM+++G P V + I +L
Sbjct: 170 EMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLG 229
Query: 234 NKQEALQNLS 243
N Q A + S
Sbjct: 230 NTQAAYKLFS 239
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 94/234 (40%), Gaps = 43/234 (18%)
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
V E + G + +YN + + ++R+A L+ M KG P+ +Y +
Sbjct: 97 VFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYC 156
Query: 127 WSNDLRSSWNLYCRMMGTGCLPN--TQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+L+ L M G PN T S + L+ LCK + VE ++ +M+++G
Sbjct: 157 HVGELQKVVQLVKEMQLKGLKPNLYTYSSIILL-LCKSGKVVE-GEKVLREMMKRGVFPD 214
Query: 185 ILVSDVLFDLLCDM-----------------------------------GKLVEAEKSFL 209
++ L D C + GK+VEA+K F
Sbjct: 215 HVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFN 274
Query: 210 EMIEKGHKPSQVSFRR-IKALMELANKQEALQNLSNKMALFGPSMIPKREEYLA 262
EMI+KG +P +V++ I +L ++A L N+M G + P Y A
Sbjct: 275 EMIKKGFEPDEVTYTALIDGYCKLGEMKKAFF-LHNQMVQIG--LTPNVVTYTA 325
>gi|297743427|emb|CBI36294.3| unnamed protein product [Vitis vinifera]
Length = 517
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 122/248 (49%), Gaps = 3/248 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MRE G D+V+YN L++ CK V++AYK+ +M ++PD SY+ I V
Sbjct: 218 MRERGCAVDVVAYNSLLEALCKGGNVDEAYKLFREMGSNGLAPDACSYSIFIRAYCEVND 277
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A VL M+ Y P+ YN ++ C ++++ +A L+DEM+E+G+SP+ +YN
Sbjct: 278 IHSAFQVLDRMRRYNLVPNVFTYNCIVKKLCKSEKVDEAYQLLDEMIERGVSPDLWSYNA 337
Query: 121 FFRVFYWSN-DLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ F+ + ++ + L RM C+P+ + ++K+ R + + +W M E+
Sbjct: 338 I-QAFHCDHCEVNKALRLISRMEKENCMPDRHTYNMVLKMLLRVGRFDRVTDVWGGMEER 396
Query: 180 GFGSYILVSDVLFDLLC-DMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEA 238
GF V+ C GKL EA K F MI+ G P + ++ + E
Sbjct: 397 GFYPAASTYAVMVHGFCKKKGKLEEACKYFEMMIDDGIPPYSCTVELLRNRVIGLGFSEQ 456
Query: 239 LQNLSNKM 246
+ L+ KM
Sbjct: 457 IDVLAGKM 464
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 126/232 (54%), Gaps = 5/232 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GVK + + L+ V CK + V++A + +K+ E + P+ +Y+ ++ G G VG
Sbjct: 149 MGDFGVKAGVGDVDQLLYVLCKRKHVKQAQEFFDKVNVE-VMPNAKTYSILMRGWGDVGD 207
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR + +EM+E GC D AYN+ + C + +A L EM GL+P+A +Y++
Sbjct: 208 SSEARKLFEEMRERGCAVDVVAYNSLLEALCKGGNVDEAYKLFREMGSNGLAPDACSYSI 267
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPN--TQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
F R + ND+ S++ + RM +PN T +C+ + KLCK EKV+ A QL ++M+E
Sbjct: 268 FIRAYCEVNDIHSAFQVLDRMRRYNLVPNVFTYNCI-VKKLCK-SEKVDEAYQLLDEMIE 325
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALM 230
+G + + + CD ++ +A + M ++ P + ++ + ++
Sbjct: 326 RGVSPDLWSYNAIQAFHCDHCEVNKALRLISRMEKENCMPDRHTYNMVLKML 377
Score = 37.4 bits (85), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 68/183 (37%), Gaps = 37/183 (20%)
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
P A +M ++G + + C K ++ A D+ V + PNA TY++
Sbjct: 139 PGDAIRAFHQMGDFGVKAGVGDVDQLLYVLCKRKHVKQAQEFFDK-VNVEVMPNAKTYSI 197
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
R G G + ++ A +L+ +M E+G
Sbjct: 198 LMR-------------------GWGDVGDSSE----------------ARKLFEEMRERG 222
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEAL 239
++ + L + LC G + EA K F EM G P S+ I+A E+ + A
Sbjct: 223 CAVDVVAYNSLLEALCKGGNVDEAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDIHSAF 282
Query: 240 QNL 242
Q L
Sbjct: 283 QVL 285
>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
Length = 1001
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 113/222 (50%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G +P++V+Y LI+ CKDRQV +A+ I +M + ISP++++Y S+I GL + +
Sbjct: 145 GFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHV 204
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++ EM + PD N + C + +A ++D M+ +G+ PN TYN
Sbjct: 205 TTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDG 264
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
N++ + ++ M+ C+ N S L+ + + V+ A+ L+ +M +
Sbjct: 265 HCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPN 324
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + L LC +G+L +A F EM+ +G P V++R +
Sbjct: 325 TVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTL 366
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 109/226 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV+P++V+YN L+D +C +V+ A K+ + M +D +VISY ++I G +
Sbjct: 246 MIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQS 305
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA + +EM P+ YN I C RL+DA L EMV +G P+ TY
Sbjct: 306 VDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRT 365
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L + L + G+ P+ Q ++ R ++E A L++++ KG
Sbjct: 366 LSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKG 425
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ +++ LC G L EA K F EM + G P+ ++ I
Sbjct: 426 LQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLI 471
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 118/237 (49%), Gaps = 8/237 (3%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ P++V ++ ++D CK+ + A+ +V+ M + PDV++YT+++ G L + D+A
Sbjct: 704 IMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAV 763
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
V M GC P+ +YN I YC +R+ A GL+++M +GL + TYN
Sbjct: 764 KVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGL 823
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSY 184
L+ + L+ M+ +G +P+ + L+ LCK E A+ L + +
Sbjct: 824 CHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAE-AMVLLKAIEGSNLDAD 882
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI------KALMELANK 235
ILV ++ D +C G+L A F + KG +P ++ + + L++ ANK
Sbjct: 883 ILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANK 939
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 108/230 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV+PD+V+Y L+D +C ++++A K+ + M + P+V SY +I G + +
Sbjct: 734 MIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQR 793
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA +L++M G D YN I C RL+ A L EMV G P+ TY +
Sbjct: 794 MDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRI 853
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++ L + L + G+ + + R ++E A L++++ KG
Sbjct: 854 LLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKG 913
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALM 230
+ +++ LC G L EA K F +M E + S R K+L+
Sbjct: 914 LQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENDIWSNSTSSRNQKSLI 963
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 79/159 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD+V+Y L D CK+R ++KA +++ + + PD+ YT+I+ G+ G+
Sbjct: 351 MVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGE 410
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ ARD+ + G P+ YN I C L +AS L EM + G SPN TYNL
Sbjct: 411 LEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNL 470
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKL 159
R F +N+ + L M+ G + + LV +
Sbjct: 471 ITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGM 509
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 110/246 (44%), Gaps = 22/246 (8%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEK----------------------MRD 38
M G+ PD+ + N LI+ +C R++ A+ ++ K M
Sbjct: 607 MDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCKMIT 666
Query: 39 EDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRD 98
+ ISPD+ +Y S+I L + + +L EM P+ ++ + C +
Sbjct: 667 KGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAI 726
Query: 99 ASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK 158
A ++D M+++G+ P+ TY +++ + ++ M+ GC+PN +S L+
Sbjct: 727 AHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILIN 786
Query: 159 LCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
+ ++++ A+ L M +G + + + L LC +G+L A F EM+ G P
Sbjct: 787 GYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIP 846
Query: 219 SQVSFR 224
V++R
Sbjct: 847 DLVTYR 852
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 107/256 (41%), Gaps = 36/256 (14%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVG--------- 59
+++SYN LI+ YCK + V+KA + E+M ++++P+ ++Y ++I GL VG
Sbjct: 289 NVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLF 348
Query: 60 --------------------------QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIA 93
DKA +LK ++ PD Y + C A
Sbjct: 349 HEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRA 408
Query: 94 KRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSC 153
L DA L + KGL PN TYN+ L + L+ M GC PN +
Sbjct: 409 GELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTY 468
Query: 154 MFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIE 213
+ + R + ++L +M+ +GF + + +L +L D G L ++ K L
Sbjct: 469 NLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDG-LDQSVKQILCKPS 527
Query: 214 KGHKPSQVSFRRIKAL 229
+PS R + L
Sbjct: 528 SSSRPSGTQMRSLPPL 543
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 100/225 (44%), Gaps = 5/225 (2%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P V +N L+ K + + +M I PDV + +I L + + D A
Sbjct: 43 PSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSA 102
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L ++ + G PDA + IR C+ ++ +A L D+M+ +G PN TY
Sbjct: 103 LAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCK 162
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+ ++N++ M+ G PN + L+ LCK E + L N+MV+ +
Sbjct: 163 DRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVT-TLMNEMVDSKIMPDVF 221
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALME 231
+ + D LC G + EA MI +G +P+ V++ ALM+
Sbjct: 222 TLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTY---NALMD 263
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/202 (19%), Positives = 85/202 (42%), Gaps = 2/202 (0%)
Query: 26 VEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNA 85
+++A +M + P + + ++ + + ++M +G PD
Sbjct: 26 LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 85
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
I + C R+ A + ++++ G P+ATT+ R + + +L+ +M+G G
Sbjct: 86 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 145
Query: 146 CLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEA 204
PN + L+ LCK ++ E A ++++M+ KG I+ + L LC + +
Sbjct: 146 FQPNVVTYGTLINGLCKDRQVTE-AFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHV 204
Query: 205 EKSFLEMIEKGHKPSQVSFRRI 226
EM++ P + +
Sbjct: 205 TTLMNEMVDSKIMPDVFTLNTV 226
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 87/223 (39%), Gaps = 13/223 (5%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M M P V + L+ K + + +M I PDV + +I + +
Sbjct: 572 MLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRR 631
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A VL ++ + G PD Y + C +M+ KG+SP+ TYN
Sbjct: 632 LGYAFSVLAKLLKLGFQPDVVTYGTLMNGLC-------------KMITKGISPDIFTYNS 678
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + L M+ + +PN +V ++ + IA + + M+++G
Sbjct: 679 LIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRG 738
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ L D C ++ EA K F M+ KG P+ S+
Sbjct: 739 VEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSY 781
>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
Length = 648
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 115/223 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E +K +V Y+ +ID CKD + A + +M + I DV++Y+S+IGGL G+
Sbjct: 265 MEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGK 324
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D +L+EM PD ++A I + +L +A L +EM+ +G++P+ TYN
Sbjct: 325 WDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNS 384
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F N L + ++ M+ GC P+ + L+ + ++V+ ++L+ ++ KG
Sbjct: 385 LIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKG 444
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + L C GKL A++ F EM+ +G PS V++
Sbjct: 445 LIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTY 487
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 116/227 (51%), Gaps = 5/227 (2%)
Query: 1 MREM---GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGL 57
+REM + PD+V+++ LIDV+ K+ ++ +A ++ +M I+PD I+Y S+I G
Sbjct: 332 LREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCK 391
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
+A + M GC PD Y+ I +YC AKR+ D L E+ KGL PN T
Sbjct: 392 ENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTIT 451
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDM 176
YN F S L ++ L+ M+ G P+ + + L LC E + AL+++ M
Sbjct: 452 YNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGE-LNKALEIFEKM 510
Query: 177 VEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ I + +++ +C+ K+ +A F + +KG KP V++
Sbjct: 511 QKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTY 557
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 112/217 (51%), Gaps = 4/217 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+K D+V+Y+ LI C D + + K++ +M +I PDV++++++I G+
Sbjct: 300 MEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGK 359
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A+++ EM G PD YN+ I +C L +A+ + D MV KG P+ TY++
Sbjct: 360 LLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSI 419
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + L+ + G +PNT + LV + K+ A +L+ +MV +G
Sbjct: 420 LINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRG 479
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHK 217
++ +L D LCD G+L +A LE+ EK K
Sbjct: 480 VPPSVVTYGILLDGLCDNGELNKA----LEIFEKMQK 512
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 103/223 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M EM +PD+V+ + LI+ C +V +A ++++M + PD ++Y ++ L G
Sbjct: 195 MVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGN 254
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A D+ ++M+E Y+ I + C DA L +EM KG+ + TY+
Sbjct: 255 SALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSS 314
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ M+G +P+ + L+ + ++ K+ A +L+N+M+ +G
Sbjct: 315 LIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRG 374
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + L D C L EA + F M+ KG +P V++
Sbjct: 375 IAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTY 417
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 118/250 (47%), Gaps = 8/250 (3%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G++ D+ + +I+ YC+ +++ A+ ++ + PD I++++++ G L G+ +A
Sbjct: 129 GIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEA 188
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++ M E PD + I C+ R+ +A L+D MVE G P+ TY
Sbjct: 189 VALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNR 248
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPN-TQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
S + + +L+ +M + Q + + LCK + AL L+N+M KG +
Sbjct: 249 LCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCK-DGSFDDALSLFNEMEMKGIKA 307
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL---Q 240
++ L LC+ GK + K EMI + P V+F AL+++ K+ L +
Sbjct: 308 DVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTF---SALIDVFVKEGKLLEAK 364
Query: 241 NLSNKMALFG 250
L N+M G
Sbjct: 365 ELYNEMITRG 374
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 102/208 (49%), Gaps = 4/208 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ P+ ++YN L+ +C+ ++ A ++ ++M + P V++Y ++ GL G+ +KA
Sbjct: 444 GLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKA 503
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++ ++M++ YN I C A ++ DA L + +KG+ P+ TYN+
Sbjct: 504 LEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGG 563
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
L + L+ +M GC P+ + L++ + +++L +M GF +
Sbjct: 564 LCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSAD 623
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMI 212
++ D+L D +KSFL+M+
Sbjct: 624 SSTIKMVIDMLSDR----RLDKSFLDML 647
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 89/181 (49%), Gaps = 2/181 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G +PDIV+Y+ LI+ YCK ++V+ ++ ++ + + P+ I+Y +++ G G+
Sbjct: 405 MVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGK 464
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A+++ +EM G P Y + C L A + ++M + ++ YN+
Sbjct: 465 LNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNI 524
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEK 179
++ + +W+L+C + G P+ + ++ LCK+ E A L+ M E
Sbjct: 525 IIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSE-ADMLFRKMKED 583
Query: 180 G 180
G
Sbjct: 584 G 584
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 65/137 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV P +V+Y L+D C + ++ KA +I EKM+ ++ + Y II G+ +
Sbjct: 475 MVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASK 534
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A + + + G PD YN I C L +A L +M E G +P+ TYN+
Sbjct: 535 VDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNI 594
Query: 121 FFRVFYWSNDLRSSWNL 137
R + L SS L
Sbjct: 595 LIRAHLGGSGLISSVEL 611
Score = 43.9 bits (102), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 90/229 (39%), Gaps = 2/229 (0%)
Query: 23 DRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAA 82
D +V A + E M P I + + + Q D K M+ G D
Sbjct: 77 DIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYT 136
Query: 83 YNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMM 142
I YC K+L A ++ + G P+ T++ F + + L RM+
Sbjct: 137 MTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMV 196
Query: 143 GTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLV 202
P+ + L+ + +V AL L + MVE GF + + + LC G
Sbjct: 197 EMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSA 256
Query: 203 EAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEALQNLSNKMALFG 250
A F +M E+ K S V + I +L + + +AL +L N+M + G
Sbjct: 257 LALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDAL-SLFNEMEMKG 304
>gi|225443015|ref|XP_002267278.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Vitis vinifera]
Length = 624
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 122/248 (49%), Gaps = 3/248 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MRE G D+V+YN L++ CK V++AYK+ +M ++PD SY+ I V
Sbjct: 245 MRERGCAVDVVAYNSLLEALCKGGNVDEAYKLFREMGSNGLAPDACSYSIFIRAYCEVND 304
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A VL M+ Y P+ YN ++ C ++++ +A L+DEM+E+G+SP+ +YN
Sbjct: 305 IHSAFQVLDRMRRYNLVPNVFTYNCIVKKLCKSEKVDEAYQLLDEMIERGVSPDLWSYNA 364
Query: 121 FFRVFYWSN-DLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ F+ + ++ + L RM C+P+ + ++K+ R + + +W M E+
Sbjct: 365 I-QAFHCDHCEVNKALRLISRMEKENCMPDRHTYNMVLKMLLRVGRFDRVTDVWGGMEER 423
Query: 180 GFGSYILVSDVLFDLLC-DMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEA 238
GF V+ C GKL EA K F MI+ G P + ++ + E
Sbjct: 424 GFYPAASTYAVMVHGFCKKKGKLEEACKYFEMMIDDGIPPYSCTVELLRNRVIGLGFSEQ 483
Query: 239 LQNLSNKM 246
+ L+ KM
Sbjct: 484 IDVLAGKM 491
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 126/232 (54%), Gaps = 5/232 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GVK + + L+ V CK + V++A + +K+ E + P+ +Y+ ++ G G VG
Sbjct: 176 MGDFGVKAGVGDVDQLLYVLCKRKHVKQAQEFFDKVNVE-VMPNAKTYSILMRGWGDVGD 234
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR + +EM+E GC D AYN+ + C + +A L EM GL+P+A +Y++
Sbjct: 235 SSEARKLFEEMRERGCAVDVVAYNSLLEALCKGGNVDEAYKLFREMGSNGLAPDACSYSI 294
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPN--TQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
F R + ND+ S++ + RM +PN T +C+ + KLCK EKV+ A QL ++M+E
Sbjct: 295 FIRAYCEVNDIHSAFQVLDRMRRYNLVPNVFTYNCI-VKKLCK-SEKVDEAYQLLDEMIE 352
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALM 230
+G + + + CD ++ +A + M ++ P + ++ + ++
Sbjct: 353 RGVSPDLWSYNAIQAFHCDHCEVNKALRLISRMEKENCMPDRHTYNMVLKML 404
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 89/235 (37%), Gaps = 42/235 (17%)
Query: 12 SYNCLIDVYCKDRQVEKAYKIVEKMRDE---DISPDVISYTSIIGGLGLVGQPDKARDVL 68
SY+ L+D+ +Q + + MR+ +I P++ + I P A
Sbjct: 116 SYHILVDILGSSKQFPLIWDFLSDMRETRCCEICPEI--FWLIFRAYCRANLPGDAIRAF 173
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
+M ++G + + C K ++ A D+ V + PNA TY++ R
Sbjct: 174 HQMGDFGVKAGVGDVDQLLYVLCKRKHVKQAQEFFDK-VNVEVMPNAKTYSILMR----- 227
Query: 129 NDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVS 188
G G + ++ A +L+ +M E+G ++
Sbjct: 228 --------------GWGDVGDSSE----------------ARKLFEEMRERGCAVDVVAY 257
Query: 189 DVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEALQNL 242
+ L + LC G + EA K F EM G P S+ I+A E+ + A Q L
Sbjct: 258 NSLLEALCKGGNVDEAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDIHSAFQVL 312
>gi|242046162|ref|XP_002460952.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
gi|241924329|gb|EER97473.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
Length = 796
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 122/244 (50%), Gaps = 2/244 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P +V+YN LI Y KD +E+A ++ ++M + PDV++YT++I GL +G+
Sbjct: 317 MENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYTTLISGLDRIGK 376
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A EM GC P+ YNA I+ + + + + + D++ G P+ T+N
Sbjct: 377 IDAALATYSEMVRNGCSPNLCTYNALIKMHGVRGKFTEMMIVFDDLRSAGYVPDVVTWNT 436
Query: 121 FFRVFYWSNDLRSSWN-LYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
VF N L S + ++ M G +P + + L+ R + A++++ M+E
Sbjct: 437 LLAVF-GQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEA 495
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
G I + + L G+ V+AEK F EM ++ KP ++S+ + A K + +
Sbjct: 496 GIYPDISTYNAVLSALARGGRWVQAEKLFAEMEDRDCKPDELSYSSLLHAYANAKKLDKM 555
Query: 240 QNLS 243
+ LS
Sbjct: 556 KALS 559
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 122/267 (45%), Gaps = 3/267 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCK-DRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVG 59
M + GV+P +V+YN ++ VY K ++ +V+ M+++ I D +Y ++I G
Sbjct: 211 MVDGGVQPALVTYNVVLHVYSKMSVPWKEVVVLVDSMKEDGIELDRYTYNTLISCCRRRG 270
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+A + EMK G PD +N+ + Y A+R +A G++ +M G +P+ TYN
Sbjct: 271 LYREAAQMFDEMKAAGFEPDKVTFNSLLDVYGKARRHEEAIGVLKKMENAGCTPSVVTYN 330
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ L + L M G P+ + L+ R K++ AL +++MV
Sbjct: 331 SLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYTTLISGLDRIGKIDAALATYSEMVRN 390
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
G + + L + GK E F ++ G+ P V++ + A+ +
Sbjct: 391 GCSPNLCTYNALIKMHGVRGKFTEMMIVFDDLRSAGYVPDVVTWNTLLAVFGQNGLDSEV 450
Query: 240 QNLSNKMALFGPSMIPKREEYLAEMSA 266
+ +M G IP+R+ Y++ +S+
Sbjct: 451 SGVFKEMKKAG--YIPERDTYVSLISS 475
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 84/167 (50%), Gaps = 1/167 (0%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
DI N ++ +Y K++ V+K +++ M++ I+ +Y S++ +G +K +L
Sbjct: 605 DINVLNAMVSIYGKNKMVKKVEEVLTLMKENSINHSAATYNSLMHMYSRLGDCEKCEAIL 664
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
E+K G PD +YN I Y ++++AS L EM G+ P+ TYN+F + + +
Sbjct: 665 TEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGVKPDIVTYNIFIKSYVAN 724
Query: 129 NDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWN 174
+ +L ++ GC PN ++ +++ C+ VE L N
Sbjct: 725 LMFEEAIDLVRYLVAQGCKPNERTYNSILEGYCRHGRMVEAKSFLSN 771
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 97/219 (44%), Gaps = 5/219 (2%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD +Y L+ + + + A + +M D + P +++Y ++ + P K V
Sbjct: 183 PDASAYTALVSEFSRAGRFRDAVAVFRRMVDGGVQPALVTYNVVLHVYSKMSVPWKEVVV 242
Query: 68 LKE-MKEYGCYPDAAAYNAAIRNYCIAKR--LRDASGLMDEMVEKGLSPNATTYNLFFRV 124
L + MKE G D YN I C +R R+A+ + DEM G P+ T+N V
Sbjct: 243 LVDSMKEDGIELDRYTYNTLIS--CCRRRGLYREAAQMFDEMKAAGFEPDKVTFNSLLDV 300
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + + + +M GC P+ + L+ + +E AL+L +M +G
Sbjct: 301 YGKARRHEEAIGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPD 360
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ L L +GK+ A ++ EM+ G P+ ++
Sbjct: 361 VVTYTTLISGLDRIGKIDAALATYSEMVRNGCSPNLCTY 399
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 58/119 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E + +YN L+ +Y + EK I+ +++ + PD SY ++I G GQ
Sbjct: 632 MKENSINHSAATYNSLMHMYSRLGDCEKCEAILTEIKSSGMRPDRYSYNTVIYAYGRKGQ 691
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+A + EMK G PD YN I++Y +A L+ +V +G PN TYN
Sbjct: 692 MKEASRLFSEMKCSGVKPDIVTYNIFIKSYVANLMFEEAIDLVRYLVAQGCKPNERTYN 750
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/226 (19%), Positives = 96/226 (42%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G P+ +Y LI Y + ++A +I ++M + I PD+ +Y +++ L G+
Sbjct: 457 MKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGR 516
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + EM++ C PD +Y++ + Y AK+L L +++ + + P+
Sbjct: 517 WVQAEKLFAEMEDRDCKPDELSYSSLLHAYANAKKLDKMKALSEDIYAQRIEPHNWLVKT 576
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
V N L + + + C + +V + + + V+ ++ M E
Sbjct: 577 LVLVNNKVNSLSETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLTLMKENS 636
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ L + +G + E E+ G +P + S+ +
Sbjct: 637 INHSAATYNSLMHMYSRLGDCEKCEAILTEIKSSGMRPDRYSYNTV 682
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 85/196 (43%), Gaps = 11/196 (5%)
Query: 78 PDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWN- 136
PDA+AY A + + A R RDA + MV+ G+ P TYN+ V+ + + W
Sbjct: 183 PDASAYTALVSEFSRAGRFRDAVAVFRRMVDGGVQPALVTYNVVLHVY---SKMSVPWKE 239
Query: 137 ---LYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFD 193
L M G + + L+ C+R+ A Q++++M GF + + L D
Sbjct: 240 VVVLVDSMKEDGIELDRYTYNTLISCCRRRGLYREAAQMFDEMKAAGFEPDKVTFNSLLD 299
Query: 194 LLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLSNKMALFGPS 252
+ + EA +M G PS V++ I A ++ +EAL+ L +M G
Sbjct: 300 VYGKARRHEEAIGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEEALE-LKQEMEFRG-- 356
Query: 253 MIPKREEYLAEMSASD 268
M P Y +S D
Sbjct: 357 MKPDVVTYTTLISGLD 372
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/249 (20%), Positives = 92/249 (36%), Gaps = 36/249 (14%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISP----------------- 43
M + KPD +SY+ L+ Y ++++K + E + + I P
Sbjct: 527 MEDRDCKPDELSYSSLLHAYANAKKLDKMKALSEDIYAQRIEPHNWLVKTLVLVNNKVNS 586
Query: 44 ------------------DVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNA 85
D+ +++ G K +VL MKE AA YN+
Sbjct: 587 LSETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLTLMKENSINHSAATYNS 646
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
+ Y ++ E+ G+ P+ +YN + ++ + L+ M +G
Sbjct: 647 LMHMYSRLGDCEKCEAILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSG 706
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
P+ + +K E A+ L +V +G + + + C G++VEA
Sbjct: 707 VKPDIVTYNIFIKSYVANLMFEEAIDLVRYLVAQGCKPNERTYNSILEGYCRHGRMVEA- 765
Query: 206 KSFLEMIEK 214
KSFL + K
Sbjct: 766 KSFLSNLPK 774
>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
Length = 649
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 120/247 (48%), Gaps = 1/247 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ GV PD+VS++CLI ++ +++ A + +M+ + PD + YT +IGG G
Sbjct: 288 MQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGS 347
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A V EM GC PD YN + C RL DA L++EM E+G++P+ T+
Sbjct: 348 MSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTT 407
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + L+ ++ P+ + L+ R+ + A +LW+DM +
Sbjct: 408 LIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHARE 467
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
+ +L D C+ G++ EA EM+ KG+ P+ +++ IK N ++
Sbjct: 468 IFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQ 527
Query: 240 QNLSNKM 246
Q L M
Sbjct: 528 QFLQKMM 534
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 122/241 (50%), Gaps = 1/241 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E GV PD+ ++ LI YC+D EKA ++ + + + + PDV++Y S+I G+ G
Sbjct: 393 MKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGD 452
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA ++ +M +P+ Y+ I ++C ++ +A G +DEMV KG PN TYN
Sbjct: 453 LAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNS 512
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + S +++ +MM LP+ + L+ ++E + A ++N M ++
Sbjct: 513 IIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEM 572
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
+ +++ + + G + EA + F +M G +P + ++ I + N +EA
Sbjct: 573 VQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAF 632
Query: 240 Q 240
Q
Sbjct: 633 Q 633
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 110/223 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + V PD+ S+N LI +C+ +VE+A K ++M+ ++PDV+S++ +IG G+
Sbjct: 253 MDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGK 312
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A L+EMK G PD Y I +C A + +A + DEMV G P+ TYN
Sbjct: 313 MDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNT 372
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L + L M G P+ + L+ R E ALQL++ ++ +
Sbjct: 373 LLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQR 432
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + L D +C G L +A + + +M + P+ V++
Sbjct: 433 LRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTY 475
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 112/224 (50%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+KP IV++N ++ CK R+ +KA ++ M ++PDV S+ +IGG VG+
Sbjct: 218 MANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGE 277
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A KEM++ G PD +++ I + ++ A+ + EM GL P+ Y +
Sbjct: 278 VEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTM 337
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
F + + + + M+G GCLP+ + L+ LCK Q ++ A +L N+M E+
Sbjct: 338 VIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCK-QHRLLDAEELLNEMKER 396
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G + L C G +A + F ++ + +P V++
Sbjct: 397 GVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAY 440
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 117/236 (49%), Gaps = 1/236 (0%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
V PD+V++N LID + V+ A +V+ M ++ + P ++++ S++ GL + DKA+
Sbjct: 188 VFPDVVTHNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAK 247
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+V + M + PD ++N I +C + +A EM ++G++P+ +++ +F
Sbjct: 248 EVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLF 307
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ + M G G +P+ ++ R + AL++ ++MV G +
Sbjct: 308 STRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDV 367
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQ 240
+ + L + LC +L++AE+ EM E+G P +F I N ++ALQ
Sbjct: 368 VTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQ 423
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 59/114 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + + PD++++N LI Y K+ + A+ + M E + PD ++Y II G G
Sbjct: 533 MMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGN 592
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPN 114
++A V K+M G PD Y + I + A ++A L DEM+ +G +P+
Sbjct: 593 MEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAPD 646
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 72/149 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P+I++YN +I YC+ V+K + ++KM ++I PD+I++ ++I G
Sbjct: 498 MVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEEN 557
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +V M++ PDA YN I + + +A + +M G+ P+ TY
Sbjct: 558 MHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMS 617
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPN 149
+ + + ++ L+ MM G P+
Sbjct: 618 LINGHVTAGNSKEAFQLHDEMMHRGFAPD 646
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 101/231 (43%), Gaps = 2/231 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P ++ LI Y + R+ +A++ + D + + +++ L G P A +
Sbjct: 85 PQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAALSRAGWPHLAEEA 144
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
+ + +A N + +YC + A ++ EM ++ + P+ T+N+ +
Sbjct: 145 YRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFR 204
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+ D+ ++ L M G P + ++K LCK + + + A +++ M + +
Sbjct: 205 AGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHR-RFDKAKEVFRAMDQCSVAPDVR 263
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQE 237
++L C +G++ EA K + EM ++G P VSF + L K +
Sbjct: 264 SFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMD 314
>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 761
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 129/250 (51%), Gaps = 6/250 (2%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
KP ++SY+ +ID CKDR+ ++A ++ ++M+ + I PDVISYT++I G L G+ +KA+
Sbjct: 299 KPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKC 358
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
+ EM + G PD + I C ++ +A+ L++ ++++G P+ T +
Sbjct: 359 LFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLC 418
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI- 185
+ + + L+ +M GC+PN +C L+K + ++IAL+L +M+ I
Sbjct: 419 MKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGIN 478
Query: 186 -----LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ ++ D LC G+ EA + F EM G P +S+ + + K + +
Sbjct: 479 CKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAK 538
Query: 241 NLSNKMALFG 250
L N+M G
Sbjct: 539 YLFNEMVDIG 548
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 125/247 (50%), Gaps = 6/247 (2%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
KP+ +SY+ +ID CK + ++A ++ ++M+ + PDVISYTS+I G G+ A+
Sbjct: 480 KPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKY 539
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
+ EM + G PD ++ I C ++ +A+ L++ M+++G PN TY +
Sbjct: 540 LFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLC 599
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE------KG 180
++ + + L+ +M GCLP+ + L+K + ++ AL+L M+
Sbjct: 600 MNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTN 659
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
F ++ ++ D LC G+ EA + F EM G P+ +S+ + + K E +
Sbjct: 660 FKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAK 719
Query: 241 NLSNKMA 247
+L N+M
Sbjct: 720 HLFNEMV 726
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 114/221 (51%), Gaps = 6/221 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G++PD+ + LID++CK+ +V +A +++E M D+++Y+++I GL + +
Sbjct: 1 MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMV----EKGL--SPN 114
+A + MK+ GC PDA AY ++ C ++ A L EM+ + G+ P
Sbjct: 61 ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPT 120
Query: 115 ATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWN 174
+Y++ + L+ M G +P+ S L+ R K E A L+N
Sbjct: 121 LVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFN 180
Query: 175 DMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
+M++ G S + S +L D+LC GK++EA + MI++G
Sbjct: 181 EMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRG 221
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 127/251 (50%), Gaps = 8/251 (3%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
KP +VSY+ +ID CKDR+ ++A ++ ++M+ + + PDVISYTS+I G G+ +KA+
Sbjct: 118 KPTLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKC 177
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
+ EM + G D + I C ++ +A+ L++ M+++G + TY+ +
Sbjct: 178 LFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLC 237
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY-- 184
+ + + L+ M GC P+ + L+K + + ALQL +M+ G Y
Sbjct: 238 MKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLND-TGRYGI 296
Query: 185 ----ILVS-DVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
L+S ++ D LC + EA + F EM +G P +S+ + L+ K E
Sbjct: 297 KCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKA 356
Query: 240 QNLSNKMALFG 250
+ L N+M G
Sbjct: 357 KCLFNEMLDVG 367
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 119/230 (51%), Gaps = 8/230 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ +GV PD++SY LI +C+ + + A + +M D + PDV +++ +I L G+
Sbjct: 509 MKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGK 568
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++L+ M + GC P+ Y ++ C+ R+ +A+ L +M + G P+ TY
Sbjct: 569 VIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGT 628
Query: 121 FFRVFYWSNDLRSSWNLYCRMM------GTGCLPNTQSCMFLVK-LCKRQEKVEIALQLW 173
+ + +++++ L+ +M+ GT P+ S ++ LCK + E A +L+
Sbjct: 629 LMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDE-ARELF 687
Query: 174 NDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+M G ++ L C GKL +A+ F EM+++G + + V++
Sbjct: 688 KEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTY 737
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 125/291 (42%), Gaps = 41/291 (14%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G+ PD++SY LI +C + EKA + +M D I PDV + + +I L G+
Sbjct: 328 MKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGK 387
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A +L+ + + GC PD ++ C+ R+ A+ L +M + G PN T
Sbjct: 388 VIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCAT 447
Query: 121 FFRVFYWSNDLRSSWNLYCRMM------GTGCLPNTQSCMFLVK-LCK------------ 161
+ S +++ + L+ M+ G C PN S ++ LCK
Sbjct: 448 LMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFK 507
Query: 162 ----------------------RQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMG 199
R K + A L+N+MV+ G + VL D+LC G
Sbjct: 508 EMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEG 567
Query: 200 KLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFG 250
K++EA + MI++G P+ V++ + + + ++ L KM G
Sbjct: 568 KVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLG 618
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 78/131 (59%), Gaps = 6/131 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDE------DISPDVISYTSIIGG 54
M+++G PD+V+Y L+ C+ ++ A ++ +KM + + PDVISY+ II G
Sbjct: 614 MQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDG 673
Query: 55 LGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPN 114
L G+ D+AR++ KEMK G P+ +Y + I +C + +L DA L +EMV++G+ N
Sbjct: 674 LCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLN 733
Query: 115 ATTYNLFFRVF 125
A TY++ F
Sbjct: 734 AVTYSVMIHGF 744
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 119/263 (45%), Gaps = 41/263 (15%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G+ PD++SY LI +C+ + EKA + +M D I DV + + +I L G+
Sbjct: 147 MKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGK 206
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++L+ M + GC D Y+ I+ C+ R+ +A+ L M + G P+A Y
Sbjct: 207 VIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGT 266
Query: 121 FFRVFYWSNDLRSSWNLYCRMM------GTGCLPNTQSCMFLVK-LCK-RQE-------- 164
+ + ++ ++ L+ M+ G C P S ++ LCK R+E
Sbjct: 267 LMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFK 326
Query: 165 -------------------------KVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMG 199
K E A L+N+M++ G + S VL D+LC G
Sbjct: 327 EMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKG 386
Query: 200 KLVEAEKSFLEMIEKGHKPSQVS 222
K++EA K +I++G P V+
Sbjct: 387 KVIEANKLLEVVIQRGCIPDVVT 409
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 103/210 (49%), Gaps = 6/210 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++GV+PD+ +++ LID+ CK+ +V +A +++E M P+ ++YT+++ GL + +
Sbjct: 544 MVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDR 603
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVE------KGLSPN 114
+A + +M++ GC PD Y ++ C ++ A L +M+ P+
Sbjct: 604 ISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPD 663
Query: 115 ATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWN 174
+Y++ + L+ M G +PN S L+ R K+E A L+N
Sbjct: 664 VISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFN 723
Query: 175 DMVEKGFGSYILVSDVLFDLLCDMGKLVEA 204
+MV++G + V+ C G++ +A
Sbjct: 724 EMVDQGVQLNAVTYSVMIHGFCKEGQIDKA 753
>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
Length = 471
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 122/240 (50%), Gaps = 3/240 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+R MG P++V+Y LI + + +++E+A K++E+MR+ P++++Y ++ L +
Sbjct: 48 LRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSM 107
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A+DV+K+M E G P+ +N+ + +C + DA L+ MV KG+ PN TY+
Sbjct: 108 VGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSA 167
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
S + + M +G P+ + L+ LCK +K+E A Q+ M
Sbjct: 168 LIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCK-ADKIEEAEQMLRRMAGS 226
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEA 238
G ++V + C GKL+EA+K+ EM ++ P V++ I L +L EA
Sbjct: 227 GCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEA 286
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 118/228 (51%), Gaps = 3/228 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MRE G P++V+YN L+D CK V A +V+KM + +P+V+++ S++ G G
Sbjct: 83 MRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGN 142
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D AR +L M G P+ Y+A I C +++ +A +++EM G++P+A TY+
Sbjct: 143 VDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSA 202
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
++ + + + RM G+GC P+ ++ CK + +E A + +M ++
Sbjct: 203 LIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLE-AQKTLQEMRKQ 261
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHK-PSQVSFRRI 226
++ + + D LC +GK+ EA+ +M E G P V++ +
Sbjct: 262 RKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTV 309
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 121/250 (48%), Gaps = 7/250 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ GV PD +Y+ LI CK ++E+A +++ +M +PDV+ Y+SII G+
Sbjct: 188 MKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGK 247
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKG-LSPNATTYN 119
+A+ L+EM++ PD YN I C ++ +A ++D+M E G + P+ TY+
Sbjct: 248 LLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYS 307
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCK--RQEKVEIALQLWNDM 176
S+ L + L RM GC P+ + ++ LCK R E+ E LQ M
Sbjct: 308 TVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQ---GM 364
Query: 177 VEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQ 236
G ++ L LC K+ EAE+ EM G P+ V++ + + ++ +
Sbjct: 365 KRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRI 424
Query: 237 EALQNLSNKM 246
+ Q L +M
Sbjct: 425 KEAQQLVQRM 434
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 111/231 (48%), Gaps = 5/231 (2%)
Query: 21 CKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDA 80
C + A +++E+M+ +PD ++T II + G D A D L+ M GC P+
Sbjct: 1 CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNV 57
Query: 81 AAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCR 140
Y A I + AK+L +A L++EM E+G PN TYN+ + + ++ ++ +
Sbjct: 58 VTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKK 117
Query: 141 MMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMG 199
M+ G PN + LV CKR V+ A +L MV KG ++ L D LC
Sbjct: 118 MIEGGFAPNVMTFNSLVDGFCKRG-NVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQ 176
Query: 200 KLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFG 250
K +EA++ EM G P ++ + + A+K E + + +MA G
Sbjct: 177 KFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSG 227
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 93/179 (51%), Gaps = 3/179 (1%)
Query: 1 MREMG-VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVG 59
M+E G V PD+V+Y+ +I+ CK + +A K++++M +PDV++YT+II GL G
Sbjct: 293 MQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCG 352
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ ++A +L+ MK GC P+ Y I C A+++ +A +M+EM G PN TYN
Sbjct: 353 RLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYN 412
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMG--TGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDM 176
S ++ + L RM C P+ + +V + V+ A QL M
Sbjct: 413 TMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 471
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 101/227 (44%), Gaps = 5/227 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G PD ++ +I ++ A ++ +R P+V++YT++I +
Sbjct: 16 MKSAGFAPDAFTHTPIITAMANAGDLDGA---MDHLRSMGCDPNVVTYTALIAAFARAKK 72
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A +L+EM+E GC P+ YN + C + A ++ +M+E G +PN T+N
Sbjct: 73 LEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNS 132
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
F ++ + L M+ G PN + L+ LCK Q+ +E A ++ +M
Sbjct: 133 LVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLE-AKEVLEEMKAS 191
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G L LC K+ EAE+ M G P V + I
Sbjct: 192 GVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSI 238
>gi|125559009|gb|EAZ04545.1| hypothetical protein OsI_26694 [Oryza sativa Indica Group]
Length = 784
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 123/247 (49%), Gaps = 2/247 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G P +V+YN LI Y KD +E+A + ++M + I PDV++YT++I GL G+
Sbjct: 304 MERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGIKPDVVTYTTLISGLDRAGK 363
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A EM GC P+ YNA I+ + + + + + DE+ G P+ T+N
Sbjct: 364 IDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDELRSAGFVPDIVTWNT 423
Query: 121 FFRVFYWSNDLRSSWN-LYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
VF N L S + ++ M G +P + + L+ R ++A+Q++ M+E
Sbjct: 424 LLAVF-GQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEA 482
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
G + + + L G+ +AEK F EM E+ KP + S+ + A + + +
Sbjct: 483 GIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKM 542
Query: 240 QNLSNKM 246
+ LS+ +
Sbjct: 543 KALSDDI 549
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 108/224 (48%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEK-AYKIVEKMRDEDISPDVISYTSIIGGLGLVG 59
M+E GV PD +YN LI C+ R + K A ++ ++M+ PD +++ S++ G
Sbjct: 234 MKEHGVAPDRYTYNTLISC-CRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKAR 292
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ D+A +V++EM+ GC P YN+ I +Y L A L EM KG+ P+ TY
Sbjct: 293 RHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGIKPDVVTYT 352
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ + ++ Y M+ GC PN + L+K+ + K + +++++
Sbjct: 353 TLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDELRSA 412
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
GF I+ + L + G E F EM + G+ P + ++
Sbjct: 413 GFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTY 456
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 119/267 (44%), Gaps = 3/267 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCK-DRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVG 59
M + GV+P IV+YN ++ VY K ++ ++V M++ ++PD +Y ++I
Sbjct: 198 MVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRA 257
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+A V EMK G PD +N+ + Y A+R +A ++ EM G P+ TYN
Sbjct: 258 LYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYN 317
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ L + L M G P+ + L+ R K++ A+ +++MV
Sbjct: 318 SLISSYVKDGLLEQAVALKQEMEVKGIKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRN 377
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
G + + L + GK E F E+ G P V++ + A+ +
Sbjct: 378 GCKPNLCTYNALIKMHGVRGKFPEMMAVFDELRSAGFVPDIVTWNTLLAVFGQNGLDSEV 437
Query: 240 QNLSNKMALFGPSMIPKREEYLAEMSA 266
+ +M G IP+R+ Y++ +S+
Sbjct: 438 SGVFKEMKKAG--YIPERDTYVSLISS 462
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 75/144 (52%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
DI N ++ +Y K+R V K KI+ M++ I+ +Y S++ +G +K ++L
Sbjct: 592 DINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENIL 651
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
E+K G PD +YN I Y ++++AS L EM GL P+ TYN+F + + +
Sbjct: 652 TEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSN 711
Query: 129 NDLRSSWNLYCRMMGTGCLPNTQS 152
+ + L M+ GC PN ++
Sbjct: 712 SMFEEAIELVRYMVTQGCKPNERT 735
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 96/219 (43%), Gaps = 5/219 (2%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK-ARD 66
PD +Y L+ + + + A + +M D + P +++Y ++ + P K +
Sbjct: 170 PDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVE 229
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKR--LRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++ MKE+G PD YN I C +R ++A+ + DEM G P+ T+N V
Sbjct: 230 LVASMKEHGVAPDRYTYNTLIS--CCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDV 287
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + + + M GC P+ + L+ + +E A+ L +M KG
Sbjct: 288 YGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGIKPD 347
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ L L GK+ A + EM+ G KP+ ++
Sbjct: 348 VVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTY 386
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 96/226 (42%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G P+ +Y LI Y + + A +I ++M + I PDV +Y +++ L G+
Sbjct: 444 MKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGR 503
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A + EM+E C PD +Y++ + Y AKRL L D++ + + P+
Sbjct: 504 WEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKT 563
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
V N+L + + + C + +V + + V ++ + M E
Sbjct: 564 LVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESA 623
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ L + +G + E E+ G +P + S+ +
Sbjct: 624 INLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTV 669
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 54/99 (54%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
++ GV+PD SYN +I Y + Q+++A ++ +M+ + PDV++Y +
Sbjct: 654 IKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSM 713
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDA 99
++A ++++ M GC P+ YN+ + YC +L DA
Sbjct: 714 FEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDA 752
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 94/218 (43%), Gaps = 3/218 (1%)
Query: 24 RQVEKAYKIVEK--MRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAA 81
R + +A ++ E + D PD +YT+++ G+ A V + M + G P
Sbjct: 149 RVMARAGRLAEASALLDAAPGPDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIV 208
Query: 82 AYNAAIRNYC-IAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCR 140
YN + Y +A ++ L+ M E G++P+ TYN + + ++
Sbjct: 209 TYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDE 268
Query: 141 MMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGK 200
M +G P+ + L+ + + + + A+++ +M G ++ + L G
Sbjct: 269 MKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGL 328
Query: 201 LVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEA 238
L +A EM KG KP V++ + + ++ A K +A
Sbjct: 329 LEQAVALKQEMEVKGIKPDVVTYTTLISGLDRAGKIDA 366
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 50/251 (19%), Positives = 90/251 (35%), Gaps = 36/251 (14%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISP----------------- 43
M E KPD SY+ L+ Y ++++K + + + E I P
Sbjct: 514 MEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNN 573
Query: 44 ------------------DVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNA 85
D+ +++ G K +L MKE AA YN+
Sbjct: 574 LAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNS 633
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
+ Y ++ E+ G+ P+ +YN + ++ + L+ M +G
Sbjct: 634 LMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSG 693
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
P+ + VK E A++L MV +G + + + C GKL +A
Sbjct: 694 LKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDA- 752
Query: 206 KSFLEMIEKGH 216
K F+ + + H
Sbjct: 753 KIFVSNLPQLH 763
>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 754
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 110/207 (53%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G++ +I +YN LI+ CK +E+A + + M + + PDV +YT+IIG L + D+A
Sbjct: 490 GLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRA 549
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+L+EM + G P YN + +C++ R+ L++ M+EK + PN TTYN +
Sbjct: 550 HSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQ 609
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ +++S+ +Y M+ +PN + L+K + ++ AL ++M+EKGF
Sbjct: 610 YCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLT 669
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEM 211
+ L LL K EA + F +M
Sbjct: 670 ASSYNALIRLLNKKKKFTEARRLFEKM 696
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 117/250 (46%), Gaps = 6/250 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G++ + V+Y +I + C + QV A ++VE M + D +T+++ G G
Sbjct: 311 MAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGD 370
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
AR+ EM++ G D Y A I C A L++A ++ EM +KGL +A TY +
Sbjct: 371 LAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTV 430
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+ + ++ ++ +M+ PN + L LCK Q V A +L ++M K
Sbjct: 431 LIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCK-QGDVCAANELLHEMCSK 489
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALM----ELANK 235
G I + L + LC G L +A ++ ++M E G KP ++ I + EL
Sbjct: 490 GLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRA 549
Query: 236 QEALQNLSNK 245
LQ + +K
Sbjct: 550 HSLLQEMLDK 559
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 111/237 (46%), Gaps = 3/237 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + V P++V+Y L D CK V A +++ +M + + ++ +Y S+I GL G
Sbjct: 451 MVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGN 510
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A + +M E G PD Y I C +K L A L+ EM++KG+ P TYN+
Sbjct: 511 LEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNV 570
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F S + L M+ PNT + L+K ++ ++ +++ M+ +
Sbjct: 571 LMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQE 630
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQE 237
++L C + EA EMIEKG + + S+ AL+ L NK++
Sbjct: 631 VVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSY---NALIRLLNKKK 684
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 113/228 (49%), Gaps = 4/228 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G+ D V+Y LI+ C+ ++++A +++++M D+ + D ++YT +I G VG+
Sbjct: 381 MQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGK 440
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A V +M + P+ Y A C + A+ L+ EM KGL N TYN
Sbjct: 441 MTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNS 500
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEK 179
+ +L + M G P+ + ++ LC+ +E ++ A L +M++K
Sbjct: 501 LINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKE-LDRAHSLLQEMLDK 559
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLE-MIEKGHKPSQVSFRRI 226
G I+ +VL + C G+ VE K LE M+EK P+ ++ +
Sbjct: 560 GIKPTIVTYNVLMNGFCMSGR-VEGGKRLLEWMLEKNIHPNTTTYNSL 606
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 2/220 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV D + ++ +C+ + A ++M+ ++ D ++YT++I GL G+ +A
Sbjct: 350 GVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEA 409
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
VL+EM++ G DA Y I YC ++ +A + ++MV+K ++PN TY
Sbjct: 410 ERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDG 469
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGS 183
D+ ++ L M G N + L+ LCK +E A++ DM E G
Sbjct: 470 LCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCK-AGNLEQAMRTMIDMDEAGLKP 528
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + LC +L A EM++KG KP+ V++
Sbjct: 529 DVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTY 568
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 89/223 (39%), Gaps = 11/223 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+R+ G+ P S N ++ D V+ ++ EK + SY ++ L G+
Sbjct: 217 LRQYGISPSPESCNAVLCRLPLDEAVQLFQELPEK--------NTCSYNILLKALCTAGR 268
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A + EM PD Y + YC L A L+ EM +GL N Y
Sbjct: 269 IKDAHQLFDEM---ASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTS 325
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + + M+ G + + ++ R+ + A +++M ++G
Sbjct: 326 VIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRG 385
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + L + LC G+L EAE+ EM +KG V++
Sbjct: 386 LAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTY 428
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 67/137 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E + P+ +YN L+ YC ++ ++ +I + M +++ P+ +Y +I G
Sbjct: 591 MLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARN 650
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A EM E G A++YNA IR K+ +A L ++M ++ L+ YN
Sbjct: 651 MKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNF 710
Query: 121 FFRVFYWSNDLRSSWNL 137
+ + + ++L S+ L
Sbjct: 711 YIDLSFNEDNLESTLAL 727
>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22470, mitochondrial; Flags: Precursor
gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 619
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 115/223 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E +K +V Y+ +ID CKD + A + +M + I DV++Y+S+IGGL G+
Sbjct: 236 MEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGK 295
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D +L+EM PD ++A I + +L +A L +EM+ +G++P+ TYN
Sbjct: 296 WDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNS 355
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F N L + ++ M+ GC P+ + L+ + ++V+ ++L+ ++ KG
Sbjct: 356 LIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKG 415
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + L C GKL A++ F EM+ +G PS V++
Sbjct: 416 LIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTY 458
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 116/227 (51%), Gaps = 5/227 (2%)
Query: 1 MREM---GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGL 57
+REM + PD+V+++ LIDV+ K+ ++ +A ++ +M I+PD I+Y S+I G
Sbjct: 303 LREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCK 362
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
+A + M GC PD Y+ I +YC AKR+ D L E+ KGL PN T
Sbjct: 363 ENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTIT 422
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDM 176
YN F S L ++ L+ M+ G P+ + + L LC E + AL+++ M
Sbjct: 423 YNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGE-LNKALEIFEKM 481
Query: 177 VEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ I + +++ +C+ K+ +A F + +KG KP V++
Sbjct: 482 QKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTY 528
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 112/217 (51%), Gaps = 4/217 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+K D+V+Y+ LI C D + + K++ +M +I PDV++++++I G+
Sbjct: 271 MEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGK 330
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A+++ EM G PD YN+ I +C L +A+ + D MV KG P+ TY++
Sbjct: 331 LLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSI 390
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + L+ + G +PNT + LV + K+ A +L+ +MV +G
Sbjct: 391 LINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRG 450
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHK 217
++ +L D LCD G+L +A LE+ EK K
Sbjct: 451 VPPSVVTYGILLDGLCDNGELNKA----LEIFEKMQK 483
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 103/223 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M EM +PD+V+ + LI+ C +V +A ++++M + PD ++Y ++ L G
Sbjct: 166 MVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGN 225
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A D+ ++M+E Y+ I + C DA L +EM KG+ + TY+
Sbjct: 226 SALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSS 285
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ M+G +P+ + L+ + ++ K+ A +L+N+M+ +G
Sbjct: 286 LIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRG 345
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + L D C L EA + F M+ KG +P V++
Sbjct: 346 IAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTY 388
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 118/250 (47%), Gaps = 8/250 (3%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G++ D+ + +I+ YC+ +++ A+ ++ + PD I++++++ G L G+ +A
Sbjct: 100 GIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEA 159
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++ M E PD + I C+ R+ +A L+D MVE G P+ TY
Sbjct: 160 VALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNR 219
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPN-TQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
S + + +L+ +M + Q + + LCK + AL L+N+M KG +
Sbjct: 220 LCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCK-DGSFDDALSLFNEMEMKGIKA 278
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL---Q 240
++ L LC+ GK + K EMI + P V+F AL+++ K+ L +
Sbjct: 279 DVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTF---SALIDVFVKEGKLLEAK 335
Query: 241 NLSNKMALFG 250
L N+M G
Sbjct: 336 ELYNEMITRG 345
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 102/208 (49%), Gaps = 4/208 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ P+ ++YN L+ +C+ ++ A ++ ++M + P V++Y ++ GL G+ +KA
Sbjct: 415 GLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKA 474
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++ ++M++ YN I C A ++ DA L + +KG+ P+ TYN+
Sbjct: 475 LEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGG 534
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
L + L+ +M GC P+ + L++ + +++L +M GF +
Sbjct: 535 LCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSAD 594
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMI 212
++ D+L D +KSFL+M+
Sbjct: 595 SSTIKMVIDMLSDR----RLDKSFLDML 618
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 89/181 (49%), Gaps = 2/181 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G +PDIV+Y+ LI+ YCK ++V+ ++ ++ + + P+ I+Y +++ G G+
Sbjct: 376 MVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGK 435
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A+++ +EM G P Y + C L A + ++M + ++ YN+
Sbjct: 436 LNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNI 495
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEK 179
++ + +W+L+C + G P+ + ++ LCK+ E A L+ M E
Sbjct: 496 IIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSE-ADMLFRKMKED 554
Query: 180 G 180
G
Sbjct: 555 G 555
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 65/137 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV P +V+Y L+D C + ++ KA +I EKM+ ++ + Y II G+ +
Sbjct: 446 MVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASK 505
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A + + + G PD YN I C L +A L +M E G +P+ TYN+
Sbjct: 506 VDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNI 565
Query: 121 FFRVFYWSNDLRSSWNL 137
R + L SS L
Sbjct: 566 LIRAHLGGSGLISSVEL 582
Score = 44.3 bits (103), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 90/229 (39%), Gaps = 2/229 (0%)
Query: 23 DRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAA 82
D +V A + E M P I + + + Q D K M+ G D
Sbjct: 48 DIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYT 107
Query: 83 YNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMM 142
I YC K+L A ++ + G P+ T++ F + + L RM+
Sbjct: 108 MTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMV 167
Query: 143 GTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLV 202
P+ + L+ + +V AL L + MVE GF + + + LC G
Sbjct: 168 EMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSA 227
Query: 203 EAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEALQNLSNKMALFG 250
A F +M E+ K S V + I +L + + +AL +L N+M + G
Sbjct: 228 LALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDAL-SLFNEMEMKG 275
>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 839
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 127/256 (49%), Gaps = 2/256 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G P++ +Y LI +D + E A + KM + + P ++Y+++I L + G+
Sbjct: 333 MKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGR 392
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A + + M + P+ YN I+ +C ++ A+ + D+M++ G SPN TYN+
Sbjct: 393 FETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNI 452
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+++ + ++ L M G G +T + L+ R K+E A L+N+MVE G
Sbjct: 453 IIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHG 512
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
++ + + + + K+ +A F +M+E G+ PS ++ + + N+ +
Sbjct: 513 ISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAE 572
Query: 241 NLSNKMALFG--PSMI 254
N KM G P++I
Sbjct: 573 NFCGKMVKQGLLPNVI 588
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 114/220 (51%), Gaps = 6/220 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G P++++YN +I +Y K + A +++E M+ + D +Y ++I G G+
Sbjct: 438 MLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGK 497
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A + EM E+G P+ YNA I Y ++ DA L +MVE G P++ TYN+
Sbjct: 498 LEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNM 557
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEK 179
F +N + + N +M+ G LPN + F+ LCK + +A +++++M ++
Sbjct: 558 MISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNG-RTSLAFKIFHEMKKR 616
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
+ + L D LC G+ +AE+ +++ G +P+
Sbjct: 617 DYFPNLCTYSSLIDGLCQEGQAEDAER----LLDDGCEPN 652
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 117/253 (46%), Gaps = 2/253 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G++P++ ++N +I + C +V++A I+ + PD +YTS+I G G
Sbjct: 193 MLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGN 252
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A ++ M + GC P++ Y+A I C RL +A +++EM++KG+ P Y +
Sbjct: 253 LDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTI 312
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + L +M GC PN Q+ L+ R K E+A+ +++ M+ G
Sbjct: 313 PIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADG 372
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
+ L + L G+ A F M+ P+ ++ IK + Q+A
Sbjct: 373 LVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKAT 432
Query: 240 QNLSNKMALFGPS 252
+ ++M GPS
Sbjct: 433 A-IFDQMLKAGPS 444
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 108/222 (48%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PD +Y LI +CK+ ++ A+++ ++M + P+ ++Y+++I GL G+ ++A
Sbjct: 232 GACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEA 291
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
D+L+EM + G P AY I + C A R +A L+ +M ++G PN TY
Sbjct: 292 MDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISG 351
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ +Y +M+ G +P + L+ + + E AL ++ M+
Sbjct: 352 LSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPN 411
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+V+ C +G + +A F +M++ G P+ +++ I
Sbjct: 412 TETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNII 453
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 107/226 (47%), Gaps = 4/226 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G+K D +Y LI + + ++E A+ + +M + ISP+V++Y +II G V +
Sbjct: 473 MKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAK 532
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A + +M E G P + YN I + R+ +A +MV++GL PN TY
Sbjct: 533 VDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTS 592
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + ++ ++ M PN + L+ ++ + E A +L +D E
Sbjct: 593 FIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLDDGCEPN 652
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+Y L LC G+ EA++ M +KG +PS+ +R +
Sbjct: 653 VDTYT----TLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRAL 694
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 102/219 (46%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P+ +YN +I +C ++KA I ++M SP+VI+Y II G + A +
Sbjct: 410 PNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRL 469
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L+ MK G D Y I + +L A L +EMVE G+SPN TYN +
Sbjct: 470 LEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLT 529
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ + L+ +M+ +G +P++ + ++ + ++ A MV++G ++
Sbjct: 530 VAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVIT 589
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
D LC G+ A K F EM ++ + P+ ++ +
Sbjct: 590 YTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSL 628
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 95/221 (42%), Gaps = 39/221 (17%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ P++++Y ID CK+ + A+KI +M+ D P++ +Y+S+I GL GQ
Sbjct: 578 MVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQ 637
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A +L + GC P+ Y +R C R +A L++ M +KGL P+ Y
Sbjct: 638 AEDAERLLDD----GCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYR- 692
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
LV CK E VE AL++++ MV G
Sbjct: 693 ---------------------------------ALLVGQCKNLE-VESALKIFDSMVTTG 718
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQV 221
F + L LC +A+ F M++K +V
Sbjct: 719 FQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEV 759
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 114/244 (46%), Gaps = 4/244 (1%)
Query: 21 CKDR-QVEKAYKIVEKMRDE-DISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYP 78
C++ +V++ +++ ++ D + S+++++ LG RDV EM G P
Sbjct: 141 CRNEGEVKRVIQVLSEINTTYDFGYTLYSFSTLLIQLGKFDMDGLGRDVYIEMLNSGIRP 200
Query: 79 DAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLY 138
+ +NA I+ C ++++A +M + G P+ TY + +L ++ ++
Sbjct: 201 NLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMF 260
Query: 139 CRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDM 198
RM+ GC PN+ + L+ + ++E A+ + +M++KG + + LCD
Sbjct: 261 DRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDA 320
Query: 199 GKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFGPSMIPKRE 258
G+ EA K +M ++G P+ ++ + + + K E + +KM G ++P
Sbjct: 321 GRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADG--LVPTAV 378
Query: 259 EYLA 262
Y A
Sbjct: 379 TYSA 382
Score = 37.4 bits (85), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 31/154 (20%), Positives = 62/154 (40%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G +P++ +Y L+ C + +A ++VE M+ + + P Y +++ G + + A
Sbjct: 648 GCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESA 707
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ M G P + Y A I C A + A + M++K + + + +
Sbjct: 708 LKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDG 767
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK 158
+ S L M C N Q+ + L +
Sbjct: 768 LLKEGETDLSLELLHVMESRNCTLNFQTRVMLAR 801
>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
Length = 799
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 110/207 (53%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G++ +I +YN LI+ CK +E+A + + M + + PDV +YT+IIG L + D+A
Sbjct: 490 GLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRA 549
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+L+EM + G P YN + +C++ R+ L++ M+EK + PN TTYN +
Sbjct: 550 HSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQ 609
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ +++S+ +Y M+ +PN + L+K + ++ AL ++M+EKGF
Sbjct: 610 YCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLT 669
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEM 211
+ L LL K EA + F +M
Sbjct: 670 ASSYNALIRLLNKKKKFTEARRLFEKM 696
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 117/250 (46%), Gaps = 6/250 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G++ + V+Y +I + C + QV A ++VE M + D +T+++ G G
Sbjct: 311 MAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGD 370
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
AR+ EM++ G D Y A I C A L++A ++ EM +KGL +A TY +
Sbjct: 371 LAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTV 430
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+ + ++ ++ +M+ PN + L LCK Q V A +L ++M K
Sbjct: 431 LIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCK-QGDVCAANELLHEMCSK 489
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALM----ELANK 235
G I + L + LC G L +A ++ ++M E G KP ++ I + EL
Sbjct: 490 GLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRA 549
Query: 236 QEALQNLSNK 245
LQ + +K
Sbjct: 550 HSLLQEMLDK 559
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 111/237 (46%), Gaps = 3/237 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + V P++V+Y L D CK V A +++ +M + + ++ +Y S+I GL G
Sbjct: 451 MVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGN 510
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A + +M E G PD Y I C +K L A L+ EM++KG+ P TYN+
Sbjct: 511 LEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNV 570
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F S + L M+ PNT + L+K ++ ++ +++ M+ +
Sbjct: 571 LMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQE 630
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQE 237
++L C + EA EMIEKG + + S+ AL+ L NK++
Sbjct: 631 VVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSY---NALIRLLNKKK 684
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 113/228 (49%), Gaps = 4/228 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G+ D V+Y LI+ C+ ++++A +++++M D+ + D ++YT +I G VG+
Sbjct: 381 MQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGK 440
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A V +M + P+ Y A C + A+ L+ EM KGL N TYN
Sbjct: 441 MTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNS 500
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEK 179
+ +L + M G P+ + ++ LC+ +E ++ A L +M++K
Sbjct: 501 LINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKE-LDRAHSLLQEMLDK 559
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLE-MIEKGHKPSQVSFRRI 226
G I+ +VL + C G+ VE K LE M+EK P+ ++ +
Sbjct: 560 GIKPTIVTYNVLMNGFCMSGR-VEGGKRLLEWMLEKNIHPNTTTYNSL 606
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 2/220 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV D + ++ +C+ + A ++M+ ++ D ++YT++I GL G+ +A
Sbjct: 350 GVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEA 409
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
VL+EM++ G DA Y I YC ++ +A + ++MV+K ++PN TY
Sbjct: 410 ERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDG 469
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGS 183
D+ ++ L M G N + L+ LCK +E A++ DM E G
Sbjct: 470 LCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCK-AGNLEQAMRTMIDMDEAGLKP 528
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + LC +L A EM++KG KP+ V++
Sbjct: 529 DVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTY 568
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 89/223 (39%), Gaps = 11/223 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+R+ G+ P S N ++ D V+ ++ EK + SY ++ L G+
Sbjct: 217 LRQYGISPSPESCNAVLCRLPLDEAVQLFQELPEK--------NTCSYNILLKALCTAGR 268
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A + EM PD Y + YC L A L+ EM +GL N Y
Sbjct: 269 IKDAHQLFDEM---ASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTS 325
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + + M+ G + + ++ R+ + A +++M ++G
Sbjct: 326 VIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRG 385
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + L + LC G+L EAE+ EM +KG V++
Sbjct: 386 LAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTY 428
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 67/137 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E + P+ +YN L+ YC ++ ++ +I + M +++ P+ +Y +I G
Sbjct: 591 MLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARN 650
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A EM E G A++YNA IR K+ +A L ++M ++ L+ YN
Sbjct: 651 MKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNF 710
Query: 121 FFRVFYWSNDLRSSWNL 137
+ + + ++L S+ L
Sbjct: 711 YIDLSFNEDNLESTLAL 727
>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 654
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 118/247 (47%), Gaps = 12/247 (4%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ PD+V+YN LI+ + K+ + +A ++ ++M I P I+Y+S+I G + D A
Sbjct: 287 ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAE 346
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+ M GC PD +N I YC AKR+ D L+ EM E GL N TY F
Sbjct: 347 HMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGF 406
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE------- 178
DL ++ +L M+ +G PN +C L+ K++ AL+++ M +
Sbjct: 407 CQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDA 466
Query: 179 ----KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELA 233
G + ++L L + GK +EAE+ + EM +G P +++ I L + +
Sbjct: 467 SHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQS 526
Query: 234 NKQEALQ 240
EA Q
Sbjct: 527 RLDEATQ 533
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 111/229 (48%), Gaps = 7/229 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRD-EDISPDVISY-----TSIIGG 54
M E G++P+ ++Y ++D CK A ++ KM + I P+V+ + T +I G
Sbjct: 205 MLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMING 264
Query: 55 LGLVGQPDKARDVLKEMKEY-GCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSP 113
G+ +A+ +L+EM E PD YNA I + + +A L DEM+ +G+ P
Sbjct: 265 FCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIP 324
Query: 114 NATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLW 173
+ TY+ F N L ++ +++ M GC P+ + L+ R ++V+ ++L
Sbjct: 325 STITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLL 384
Query: 174 NDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
++M E G + + L C +G L A+ EM+ G P+ V+
Sbjct: 385 HEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVT 433
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 101/233 (43%), Gaps = 11/233 (4%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ P ++Y+ +ID +CK +++ A + M + SPD+I++ ++I G + D
Sbjct: 321 GIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDG 380
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+L EM E G + Y I +C L A L+ EMV G+ PN T N
Sbjct: 381 IKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDG 440
Query: 125 FYWSNDLRSSWNLYCRMMGT-----------GCLPNTQSCMFLVKLCKRQEKVEIALQLW 173
+ L+ + ++ M + G P+ Q+ L+ + K A +L+
Sbjct: 441 LCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELY 500
Query: 174 NDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+M +G + + + LC +L EA + F M K P+ V+F +
Sbjct: 501 EEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTL 553
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 91/191 (47%), Gaps = 11/191 (5%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMR----DEDIS-------PDVISYT 49
M GV P++V+ N L+D C + +++ A ++ + M+ D D S PDV +Y
Sbjct: 422 MVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYN 481
Query: 50 SIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEK 109
+I GL G+ +A ++ +EM G PD YN+ I C RL +A+ + D M K
Sbjct: 482 ILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSK 541
Query: 110 GLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIA 169
SPN T+ + + + L+C M G + N + + L+ ++ + A
Sbjct: 542 SFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGA 601
Query: 170 LQLWNDMVEKG 180
L ++ +M+ G
Sbjct: 602 LDIFQEMMASG 612
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 84/172 (48%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV+PD+ +YN LI + + +A ++ E+M I PD I+Y S+I GL + D+A
Sbjct: 472 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEA 531
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ M P+ + I YC A R+ D L EM +G+ NA TY
Sbjct: 532 TQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHG 591
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDM 176
F ++ + +++ MM +G P+T + ++ +E+++ A+ + D+
Sbjct: 592 FRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGLWSKEELKRAVAMLEDL 643
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 117/283 (41%), Gaps = 48/283 (16%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PDI+++N LI YC+ ++V+ K++ +M + + + I+YT++I G VG
Sbjct: 352 MATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGD 411
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDA--------------------- 99
+ A+D+L+EM G P+ N + C +L+DA
Sbjct: 412 LNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFN 471
Query: 100 -------------SGLMDE------------MVEKGLSPNATTYNLFFRVFYWSNDLRSS 134
SGL++E M +G+ P+ TYN + L +
Sbjct: 472 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEA 531
Query: 135 WNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDL 194
++ M PN + L+ + +V+ L+L+ +M +G + + L
Sbjct: 532 TQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHG 591
Query: 195 LCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQE 237
+G + A F EM+ G P ++ R + L L +K+E
Sbjct: 592 FRKVGNINGALDIFQEMMASGVYPDTITIRNM--LTGLWSKEE 632
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 111/250 (44%), Gaps = 15/250 (6%)
Query: 12 SYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEM 71
S+ L+ +C ++ A K+ P V+++++++ GL + + +A D+ +M
Sbjct: 115 SFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQM 174
Query: 72 KEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDL 131
C P+ + + C R+ +A L+D M+E GL PN TY D
Sbjct: 175 ----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDT 230
Query: 132 RSSWNLYCRMMGTGCL-PNT-------QSCMFLVKLCKRQEKVEIALQLWNDMVE-KGFG 182
S+ NL +M + PN ++CM + C E A QL +M+E K
Sbjct: 231 VSALNLLRKMEEVSHIKPNVVIWPLERRTCM-INGFCSSGRWSE-AQQLLQEMLERKKIS 288
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNL 242
++ + L + GK EAE+ + EM+ +G PS +++ + N+ +A +++
Sbjct: 289 PDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHM 348
Query: 243 SNKMALFGPS 252
MA G S
Sbjct: 349 FYLMATKGCS 358
>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
Length = 683
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 123/252 (48%), Gaps = 12/252 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E + P++V+YN LI+ + K+ + +A ++ ++M I P+ I+Y S+I G +
Sbjct: 314 MLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDR 373
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A D+ M GC PD + I YC AKR+ D L+ EM +GL N TYN
Sbjct: 374 LDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNT 433
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE-- 178
F DL ++ +L +M+ +G P+ +C L+ K++ AL+++ M +
Sbjct: 434 LIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 493
Query: 179 ---------KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKA 228
G +L ++L L + GK +EAE+ + EM +G P +++ I
Sbjct: 494 MDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 553
Query: 229 LMELANKQEALQ 240
L + + EA Q
Sbjct: 554 LCKQSRLDEATQ 565
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 118/247 (47%), Gaps = 1/247 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRD-EDISPDVISYTSIIGGLGLVG 59
M E G++PD ++Y +D CK A ++ KM + I P+V+ Y++II GL G
Sbjct: 208 MVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDG 267
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ + ++ EM++ G +P+ YN I +CI+ R A L+ EM+E+ +SPN TYN
Sbjct: 268 RHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYN 327
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
F + LY M+ G +PNT + ++ +Q++++ A ++ M K
Sbjct: 328 ALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATK 387
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
G + L D C ++ + + EM +G + V++ + L A
Sbjct: 388 GCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAA 447
Query: 240 QNLSNKM 246
+LS +M
Sbjct: 448 LDLSQQM 454
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 113/217 (52%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+KP++V Y+ +ID CKD + ++ + +M+D+ I P++++Y +IGG + G+ A+
Sbjct: 249 IKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQ 308
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+L+EM E P+ YNA I + + +A+ L DEM+ +G+ PN TYN F
Sbjct: 309 RLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGF 368
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ L ++ +++ M GC P+ + L+ ++++ ++L ++M +G +
Sbjct: 369 CKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANT 428
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
+ + L C +G L A +MI G P V+
Sbjct: 429 VTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVT 465
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 104/225 (46%), Gaps = 7/225 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++ DI S+ LI +C ++ A K+ + PDV+++T+++ GL L +
Sbjct: 107 MERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHR 166
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A D+ ++ C PD + + C R+ +A L+D MVE GL P+ TY
Sbjct: 167 VSEALDLFHQI----CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGT 222
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCL-PNTQSCMFLVK-LCKRQEKVEIALQLWNDMVE 178
F D S+ NL +M + PN ++ LCK + + L+ +M +
Sbjct: 223 FVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSD-SHNLFIEMQD 281
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
KG I+ + + C G+ A++ EM+E+ P+ V++
Sbjct: 282 KGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTY 326
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 86/172 (50%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV+PD+++YN LI + + +A ++ E+M I PD I+Y+S+I GL + D+A
Sbjct: 504 GVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 563
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ M P+ +N I YC A R+ D L EM +G+ +A Y
Sbjct: 564 TQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYG 623
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDM 176
F ++ + +++ M+ +G P+T + ++ +E++E A+ + D+
Sbjct: 624 FRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDL 675
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 91/191 (47%), Gaps = 11/191 (5%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMR----DEDIS-------PDVISYT 49
M GV PDIV+ N L+D C + +++ A ++ + M+ D D S PDV++Y
Sbjct: 454 MISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYN 513
Query: 50 SIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEK 109
+I GL G+ +A ++ +EM G PD Y++ I C RL +A+ + M K
Sbjct: 514 ILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSK 573
Query: 110 GLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIA 169
SPN T+N + + + L+C M G + + + L+ ++ + A
Sbjct: 574 SFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGA 633
Query: 170 LQLWNDMVEKG 180
L ++ +M+ G
Sbjct: 634 LDIFQEMISSG 644
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/272 (19%), Positives = 104/272 (38%), Gaps = 46/272 (16%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD+ ++ LID YC ++++ +++ +M + + ++Y ++I G LVG
Sbjct: 384 MATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGD 443
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDA--------------------- 99
+ A D+ ++M G PD N + C +L+DA
Sbjct: 444 LNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFN 503
Query: 100 -------------------------SGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSS 134
L +EM +G+ P+ TY+ + L +
Sbjct: 504 GVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 563
Query: 135 WNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDL 194
++ M PN + L+ + +V+ L+L+ +M +G + ++ L
Sbjct: 564 TQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYG 623
Query: 195 LCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+G + A F EMI G P ++ R +
Sbjct: 624 FRKVGNINGALDIFQEMISSGVYPDTITIRNM 655
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 62/130 (47%), Gaps = 1/130 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ PD ++Y+ +ID CK ++++A ++ M + SP+V+++ ++I G G+
Sbjct: 535 MPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGR 594
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D ++ EM G DA Y I + + A + EM+ G+ P+ T
Sbjct: 595 VDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRN 654
Query: 121 FFRVFYWSND 130
F WS +
Sbjct: 655 MLTGF-WSKE 663
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 54/106 (50%), Gaps = 3/106 (2%)
Query: 4 MGVK---PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MG K P++V++N LI+ YCK +V+ ++ +M I D I Y ++I G VG
Sbjct: 570 MGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGN 629
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEM 106
+ A D+ +EM G YPD + + + L A +++++
Sbjct: 630 INGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDL 675
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 86/204 (42%), Gaps = 5/204 (2%)
Query: 24 RQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAY 83
+ +E A + M P VI + ++G + + +PD + ++M+ D ++
Sbjct: 60 KGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSF 119
Query: 84 NAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMG 143
I+ +C +L A ++ + GL P+ T+ + + + +L+ ++
Sbjct: 120 TILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI-- 177
Query: 144 TGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVE 203
C P+ + L+ R+ +V A+ L + MVE G + D +C MG V
Sbjct: 178 --CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVS 235
Query: 204 AEKSFLEMIEKGH-KPSQVSFRRI 226
A +M E H KP+ V + I
Sbjct: 236 ALNLLRKMEEISHIKPNVVIYSAI 259
>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
Length = 799
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 110/207 (53%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G++ +I +YN LI+ CK +E+A + + M + + PDV +YT+IIG L + D+A
Sbjct: 490 GLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRA 549
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+L+EM + G P YN + +C++ R+ L++ M+EK + PN TTYN +
Sbjct: 550 HSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQ 609
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ +++S+ +Y M+ +PN + L+K + ++ AL ++M+EKGF
Sbjct: 610 YCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLT 669
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEM 211
+ L LL K EA + F +M
Sbjct: 670 ASSYNALIRLLNKKKKFTEARRLFEKM 696
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 117/250 (46%), Gaps = 6/250 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G++ + V+Y +I + C + QV A ++VE M + D +T+++ G G
Sbjct: 311 MAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGD 370
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
AR+ EM++ G D Y A I C A L++A ++ EM +KGL +A TY +
Sbjct: 371 LAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTV 430
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+ + ++ ++ +M+ PN + L LCK Q V A +L ++M K
Sbjct: 431 LIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCK-QGDVCAANELLHEMCSK 489
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALM----ELANK 235
G I + L + LC G L +A ++ ++M E G KP ++ I + EL
Sbjct: 490 GLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRA 549
Query: 236 QEALQNLSNK 245
LQ + +K
Sbjct: 550 HSLLQEMLDK 559
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 111/237 (46%), Gaps = 3/237 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + V P++V+Y L D CK V A +++ +M + + ++ +Y S+I GL G
Sbjct: 451 MVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGN 510
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A + +M E G PD Y I C +K L A L+ EM++KG+ P TYN+
Sbjct: 511 LEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNV 570
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F S + L M+ PNT + L+K ++ ++ +++ M+ +
Sbjct: 571 LMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQE 630
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQE 237
++L C + EA EMIEKG + + S+ AL+ L NK++
Sbjct: 631 VVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSY---NALIRLLNKKK 684
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 113/228 (49%), Gaps = 4/228 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G+ D V+Y LI+ C+ ++++A +++++M D+ + D ++YT +I G VG+
Sbjct: 381 MQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGK 440
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A V +M + P+ Y A C + A+ L+ EM KGL N TYN
Sbjct: 441 MTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNS 500
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEK 179
+ +L + M G P+ + ++ LC+ +E ++ A L +M++K
Sbjct: 501 LINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKE-LDRAHSLLQEMLDK 559
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLE-MIEKGHKPSQVSFRRI 226
G I+ +VL + C G+ VE K LE M+EK P+ ++ +
Sbjct: 560 GIKPTIVTYNVLMNGFCMSGR-VEGGKRLLEWMLEKNIHPNTTTYNSL 606
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 2/220 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV D + ++ +C+ + A ++M+ ++ D ++YT++I GL G+ +A
Sbjct: 350 GVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEA 409
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
VL+EM++ G DA Y I YC ++ +A + ++MV+K ++PN TY
Sbjct: 410 ERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDG 469
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGS 183
D+ ++ L M G N + L+ LCK +E A++ DM E G
Sbjct: 470 LCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCK-AGNLEQAMRTMIDMDEAGLKP 528
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + LC +L A EM++KG KP+ V++
Sbjct: 529 DVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTY 568
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 89/223 (39%), Gaps = 11/223 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+R+ G+ P S N ++ D V+ ++ EK + SY ++ L G+
Sbjct: 217 LRQYGISPSPESCNAVLCRLPLDEAVQLFQELPEK--------NTCSYNILLKALCTAGR 268
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A + EM PD Y + YC L A L+ EM +GL N Y
Sbjct: 269 IKDAHQLFDEM---ASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTS 325
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + + M+ G + + ++ R+ + A +++M ++G
Sbjct: 326 VIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRG 385
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + L + LC G+L EAE+ EM +KG V++
Sbjct: 386 LAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTY 428
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 66/137 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E + P+ +YN L+ YC ++ ++ +I + M +++ P+ +Y +I G
Sbjct: 591 MLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARN 650
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A EM E G A++YNA IR K+ +A L ++M + L+ YN
Sbjct: 651 MKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKDRLTAEPDVYNF 710
Query: 121 FFRVFYWSNDLRSSWNL 137
+ + + ++L S+ L
Sbjct: 711 YIDLSFNEDNLESTLAL 727
>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
Length = 600
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 123/240 (51%), Gaps = 4/240 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G +P++ +YN LID K+ +V +A+++ + + PD I+YT I GL G+ + A
Sbjct: 288 GYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDA 347
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+LK+M E GC PD ++NA I C KR+ +A L+ M KG SPNA ++N
Sbjct: 348 LLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICG 407
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCK-RQE-KVEIALQLWNDMVEKGF 181
+ + + + M+ G P + LV LCK RQE +++ A+ L++ M+EKG
Sbjct: 408 QCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGR 467
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQ 240
++ L D L GKL +A + M KG P+ ++ I L L EAL+
Sbjct: 468 VPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALE 527
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 120/246 (48%), Gaps = 4/246 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G PD+VS+N +I+ CK+++V++A ++ M + SP+ IS+ ++I G G+
Sbjct: 354 MDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGK 413
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAK---RLRDASGLMDEMVEKGLSPNATT 117
KA KEM + G P YN + C A+ R+++A L D M+EKG P+ T
Sbjct: 414 WKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVT 473
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
Y+ + L + L M GC+PN + L+ +KV+ AL+L+ MV
Sbjct: 474 YSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMV 533
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP-SQVSFRRIKALMELANKQ 236
EKG + + LC + +A F +E G P S + F I L +A
Sbjct: 534 EKGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAVARVD 593
Query: 237 EALQNL 242
EAL+ L
Sbjct: 594 EALKLL 599
Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 122/256 (47%), Gaps = 35/256 (13%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PD+V+YN LI+ +CK ++++A +I+++M E + PDV++Y S++ GL G+ D+A
Sbjct: 150 GFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEA 209
Query: 65 R---------------------------------DVLKEMKEYGCYPDAAAYNAAIRNYC 91
R +L++M GC PD +YNA I
Sbjct: 210 RMLIVDKGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLA 269
Query: 92 IAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQ 151
+ + +A L ++ +G P TYN+ + + ++ L+ ++ G P+
Sbjct: 270 REQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAI 329
Query: 152 S-CMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLE 210
+ +F+ LCK +VE AL + DM EKG ++ + + + LC ++ EAE
Sbjct: 330 TYTVFIDGLCK-AGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSG 388
Query: 211 MIEKGHKPSQVSFRRI 226
M KG P+ +SF +
Sbjct: 389 MEAKGCSPNAISFNTL 404
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 125/278 (44%), Gaps = 34/278 (12%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G P+ ++YN L+ C ++ A + E+M SPDV++Y +++ G VG+
Sbjct: 76 MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGK 135
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + + G PD YNA I +C A +L +A ++ MV + L P+ TYN
Sbjct: 136 LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNS 195
Query: 121 FF-----------------------RVFYWSN----------DLRSSWNLYCRMMGTGCL 147
V +S L S+ L +M+ GC
Sbjct: 196 LVNGLCKNGRVDEARMLIVDKGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCK 255
Query: 148 PNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKS 207
P+ S L+ R++ V AL+L+ ++ +G+ + ++L D L ++ EA +
Sbjct: 256 PDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFEL 315
Query: 208 FLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLSN 244
F +++ G +P +++ I L + ++AL L +
Sbjct: 316 FSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKD 353
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 121/257 (47%), Gaps = 13/257 (5%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
DI ++N I C+ ++ A + + MR P+ I+Y +++ GL G+ A+ +
Sbjct: 49 DISTFNIYISGLCRASRIGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALY 108
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
+ M + G PD YN + +C +L +A + D V++G P+ TYN F +
Sbjct: 109 ERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKA 168
Query: 129 NDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVS 188
+ L + + RM+ +P+ + LV + +V+ A L +V+KGF ++
Sbjct: 169 DKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARML---IVDKGFSPNVITY 225
Query: 189 DVLFDLLCDMGKLVEAEKSFLE-MIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMA 247
L LC + +E+ + LE M+ G KP VS+ AL+ ++ Q +S +
Sbjct: 226 STLISGLCRELRRLESARQLLEKMVLNGCKPDIVSY---NALIHGLARE---QGVSEALK 279
Query: 248 LFGPSMIPKREEYLAEM 264
LFG + R+ Y E+
Sbjct: 280 LFGSVL---RQGYEPEV 293
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 117/244 (47%), Gaps = 5/244 (2%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD + L+ K ++EKA++ VE++ + + D+ ++ I GL + A+ V
Sbjct: 14 PDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLC-DISTFNIYISGLCRASRIGDAQTV 72
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
M+++G +P+ YNA + C R+ DA L + M++ G SP+ TYN F
Sbjct: 73 FDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCK 132
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
L + ++ + G +P+ + L+ + +K++ A ++ MV + ++
Sbjct: 133 VGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVT 192
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLSNKM 246
+ L + LC G++ EA + +++KG P+ +++ I L + E+ + L KM
Sbjct: 193 YNSLVNGLCKNGRVDEAR---MLIVDKGFSPNVITYSTLISGLCRELRRLESARQLLEKM 249
Query: 247 ALFG 250
L G
Sbjct: 250 VLNG 253
Score = 40.8 bits (94), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 35/69 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G PD ++Y +I CK V+KA + + + + P Y S+I GL V +
Sbjct: 532 MVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAVAR 591
Query: 61 PDKARDVLK 69
D+A +L+
Sbjct: 592 VDEALKLLQ 600
>gi|225432738|ref|XP_002279088.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial [Vitis vinifera]
Length = 535
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 111/218 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E G PD++SY +++ YC+++ K ++ +M ++ P+V++YT ++ LG +
Sbjct: 283 MKEHGFCPDVISYTSIVEAYCREKDFRKVNSVLNEMEEKGCPPNVVTYTIVMHALGKGKE 342
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA +V ++MK C PD + Y++ I A RL+DA + ++M ++G P+ TYN
Sbjct: 343 ISKALEVYEKMKGSSCVPDTSFYSSLIYILSKAGRLKDARDVFEDMTKQGAIPDVLTYNT 402
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + L +M + C P+ + L+K+C R ++++ L N M +
Sbjct: 403 MISAACMHSQEEDALKLLLKMEESSCKPDLNTYSPLLKMCCRNNRMKVLSALLNHMFKND 462
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
+ +L LC GKL A F EM+ KG P
Sbjct: 463 ISLEVGTYSLLVHGLCKSGKLEHACLFFEEMVSKGLVP 500
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 116/246 (47%), Gaps = 1/246 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GVK D ++ N L+D K+ VE A + + +D I + ++ +I G +
Sbjct: 214 MERFGVKKDTLAMNTLMDALVKENSVEHANDVFVEFKDS-ILLNPHTFNVLIHGWCKARK 272
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A + EMKE+G PD +Y + + YC K R + +++EM EKG PN TY +
Sbjct: 273 MDNALKSMAEMKEHGFCPDVISYTSIVEAYCREKDFRKVNSVLNEMEEKGCPPNVVTYTI 332
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++ + +Y +M G+ C+P+T L+ + + +++ A ++ DM ++G
Sbjct: 333 VMHALGKGKEISKALEVYEKMKGSSCVPDTSFYSSLIYILSKAGRLKDARDVFEDMTKQG 392
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+L + + C + +A K L+M E KP ++ + + N+ + L
Sbjct: 393 AIPDVLTYNTMISAACMHSQEEDALKLLLKMEESSCKPDLNTYSPLLKMCCRNNRMKVLS 452
Query: 241 NLSNKM 246
L N M
Sbjct: 453 ALLNHM 458
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 84/214 (39%), Gaps = 3/214 (1%)
Query: 47 SYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEM 106
SY S++ LG + + D ++++EM G Y A +R A R +DA M
Sbjct: 155 SYNSMVDILGKLKKFDLMWELVEEMDRLGGYVSLATMTKVMRRLARASRWKDAIEAFRGM 214
Query: 107 VEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKV 166
G+ + N N + + +++ + L N + L+ + K+
Sbjct: 215 ERFGVKKDTLAMNTLMDALVKENSVEHANDVFVEFKDS-ILLNPHTFNVLIHGWCKARKM 273
Query: 167 EIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ AL+ +M E GF ++ + + C + EM EKG P+ V++ +
Sbjct: 274 DNALKSMAEMKEHGFCPDVISYTSIVEAYCREKDFRKVNSVLNEMEEKGCPPNVVTYTIV 333
Query: 227 KALMELANKQEALQNLSNKMALFGPSMIPKREEY 260
+ L +E + L + G S +P Y
Sbjct: 334 --MHALGKGKEISKALEVYEKMKGSSCVPDTSFY 365
>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
Length = 862
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 114/228 (50%), Gaps = 4/228 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GVKPD+V+YN +ID CK + V++A +++ M D+D+ PD+ +Y +I G G+
Sbjct: 295 MIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGE 354
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ L+EM G PD Y+ + C + +A + M+ KG+ PN T Y +
Sbjct: 355 WKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGI 414
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEI--ALQLWNDMVE 178
+ + +L M+ G PN +F + LC +K I A+ +++ M +
Sbjct: 415 LLHGYAARGAIADLTDLLDLMVANGISPNNY--IFNIVLCAYAKKAMIDEAMHIFSRMSQ 472
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G ++ +L D LC +G++ +A F +MI G P+ V F +
Sbjct: 473 HGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSL 520
Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 111/214 (51%), Gaps = 4/214 (1%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P++V+YN +ID CK + V++A +++ M D+ + DV++Y++II GL D+A V
Sbjct: 197 PNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGV 256
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L+ M + G PD YN I C A+ + A G++ M++KG+ P+ TYN
Sbjct: 257 LQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCK 316
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQS--CMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ + + + M+ P+ Q+ C+ L + K E+ +L +M +G +
Sbjct: 317 AQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWK-EVVRRL-EEMYARGLDPDV 374
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
+ +L D LC GK EA K F MI KG KP+
Sbjct: 375 VTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPN 408
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 115/224 (51%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV+P++V +N ++ C + QV A ++++ M + P+VISY ++IGG L G+
Sbjct: 540 MWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGR 599
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A +L M G PD +Y+ +R YC R+ +A L EM+ KG++P A TY+
Sbjct: 600 TDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYST 659
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ + + + LY M+ +G + + + L LCK V+ A +++ + K
Sbjct: 660 ILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCK-TNCVDEAFKIFQSLCSK 718
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I+ ++ D+L G+ +A F + G P+ V++
Sbjct: 719 DLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTY 762
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 126/258 (48%), Gaps = 6/258 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + VKPDI +YNCLI Y + ++ + +E+M + PDV++Y+ ++ L G+
Sbjct: 330 MIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGK 389
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR + M G P+ Y + Y + D + L+D MV G+SPN +N+
Sbjct: 390 CTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNI 449
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + +++ RM G P+ + L+ + +V+ A+ +N M+ G
Sbjct: 450 VLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDG 509
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL- 239
+V + L LC + + +AE+ F EM ++G +P+ V F I + L N+ + +
Sbjct: 510 VTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTI--MCNLCNEGQVMV 567
Query: 240 -QNLSNKMALFG--PSMI 254
Q L + M G P++I
Sbjct: 568 AQRLIDSMERVGVRPNVI 585
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 120/236 (50%), Gaps = 1/236 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV P+ V +N L+ C + EKA ++ +M D+ + P+V+ + +I+ L GQ A
Sbjct: 509 GVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVA 568
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ ++ M+ G P+ +YN I +C+A R +A+ L+D MV GL P+ +Y+ R
Sbjct: 569 QRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRG 628
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + + +++ L+ M+ G P + +++ + A +L+ +M++ G
Sbjct: 629 YCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWD 688
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEAL 239
I +++ + LC + EA K F + K +P+ ++F I L + K++A+
Sbjct: 689 IYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAM 744
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 105/226 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +GV+P+++SYN LI +C + ++A ++++ M + PD+ISY +++ G G+
Sbjct: 575 MERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGR 634
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A + +EM G P A Y+ ++ +R +A L M++ G + TYN+
Sbjct: 635 IDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNI 694
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+N + ++ ++ + PN + ++ + + + + A+ L+ + G
Sbjct: 695 ILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHG 754
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ ++ + G L E + FL M + G P V I
Sbjct: 755 LVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAI 800
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 102/226 (45%), Gaps = 6/226 (2%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
V+PD+ +Y+ L +C+ ++E + + + + ++ GL + D+A
Sbjct: 86 VRPDLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAM 145
Query: 66 DVL-KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKG---LSPNATTYNLF 121
D+L + M E+GC P+ + N ++ C KR+ +A L+ M E G +PN TYN
Sbjct: 146 DILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTI 205
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGC-LPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + + M+ G L + LCK Q V+ A + M++KG
Sbjct: 206 IDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQ-AVDRAEGVLQHMIDKG 264
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ + + D LC + AE MI+KG KP V++ I
Sbjct: 265 VKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTI 310
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 62/123 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G + DI +YN +++ CK V++A+KI + + +D+ P++I++T +I L G+
Sbjct: 680 MIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGR 739
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A D+ + +G P+ Y ++N L + L M + G +P++ N
Sbjct: 740 KKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNA 799
Query: 121 FFR 123
R
Sbjct: 800 IIR 802
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 60/120 (50%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
++P+I+++ +IDV K + + A + + + P+V++Y ++ + G D+
Sbjct: 720 LRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFD 779
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
++ M++ GC PD+ NA IR+ + A + ++ E S A+T +L +F
Sbjct: 780 NLFLAMEKSGCTPDSVMLNAIIRSLLGRGEIMRAGAYLSKIDEMNFSLEASTTSLLISLF 839
>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 686
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 123/252 (48%), Gaps = 12/252 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E + P++V+YN LI+ + K+ + +A ++ ++M I P+ I+Y S+I G +
Sbjct: 314 MLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDR 373
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A D+ M GC PD + I YC AKR+ D L+ EM +GL N TYN
Sbjct: 374 LDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNT 433
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE-- 178
F DL ++ +L +M+ +G P+ +C L+ K++ AL+++ M +
Sbjct: 434 LIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 493
Query: 179 ---------KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKA 228
G +L ++L L + GK +EAE+ + EM +G P +++ I
Sbjct: 494 MDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 553
Query: 229 LMELANKQEALQ 240
L + + EA Q
Sbjct: 554 LCKQSRLDEATQ 565
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 118/247 (47%), Gaps = 1/247 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRD-EDISPDVISYTSIIGGLGLVG 59
M E G++PD ++Y +D CK A ++ KM + I P+V+ Y++II GL G
Sbjct: 208 MVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDG 267
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ + ++ EM++ G +P+ YN I +CI+ R A L+ EM+E+ +SPN TYN
Sbjct: 268 RHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYN 327
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
F + LY M+ G +PNT + ++ +Q++++ A ++ M K
Sbjct: 328 ALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATK 387
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
G + L D C ++ + + EM +G + V++ + L A
Sbjct: 388 GCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAA 447
Query: 240 QNLSNKM 246
+LS +M
Sbjct: 448 LDLSQQM 454
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 113/217 (52%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+KP++V Y+ +ID CKD + ++ + +M+D+ I P++++Y +IGG + G+ A+
Sbjct: 249 IKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQ 308
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+L+EM E P+ YNA I + + +A+ L DEM+ +G+ PN TYN F
Sbjct: 309 RLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGF 368
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ L ++ +++ M GC P+ + L+ ++++ ++L ++M +G +
Sbjct: 369 CKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANT 428
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
+ + L C +G L A +MI G P V+
Sbjct: 429 VTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVT 465
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 104/225 (46%), Gaps = 7/225 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++ DI S+ LI +C ++ A K+ + PDV+++T+++ GL L +
Sbjct: 107 MERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHR 166
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A D+ ++ C PD + + C R+ +A L+D MVE GL P+ TY
Sbjct: 167 VSEALDLFHQI----CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGT 222
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCL-PNTQSCMFLVK-LCKRQEKVEIALQLWNDMVE 178
F D S+ NL +M + PN ++ LCK + + L+ +M +
Sbjct: 223 FVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSD-SHNLFIEMQD 281
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
KG I+ + + C G+ A++ EM+E+ P+ V++
Sbjct: 282 KGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTY 326
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 86/172 (50%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV+PD+++YN LI + + +A ++ E+M I PD I+Y+S+I GL + D+A
Sbjct: 504 GVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 563
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ M P+ +N I YC A R+ D L EM +G+ +A Y
Sbjct: 564 TQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYG 623
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDM 176
F ++ + +++ M+ +G P+T + ++ +E++E A+ + D+
Sbjct: 624 FRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDL 675
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 91/191 (47%), Gaps = 11/191 (5%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMR----DEDIS-------PDVISYT 49
M GV PDIV+ N L+D C + +++ A ++ + M+ D D S PDV++Y
Sbjct: 454 MISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYN 513
Query: 50 SIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEK 109
+I GL G+ +A ++ +EM G PD Y++ I C RL +A+ + M K
Sbjct: 514 ILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSK 573
Query: 110 GLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIA 169
SPN T+N + + + L+C M G + + + L+ ++ + A
Sbjct: 574 SFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGA 633
Query: 170 LQLWNDMVEKG 180
L ++ +M+ G
Sbjct: 634 LDIFQEMISSG 644
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/272 (19%), Positives = 104/272 (38%), Gaps = 46/272 (16%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD+ ++ LID YC ++++ +++ +M + + ++Y ++I G LVG
Sbjct: 384 MATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGD 443
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDA--------------------- 99
+ A D+ ++M G PD N + C +L+DA
Sbjct: 444 LNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFN 503
Query: 100 -------------------------SGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSS 134
L +EM +G+ P+ TY+ + L +
Sbjct: 504 GVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 563
Query: 135 WNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDL 194
++ M PN + L+ + +V+ L+L+ +M +G + ++ L
Sbjct: 564 TQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYG 623
Query: 195 LCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+G + A F EMI G P ++ R +
Sbjct: 624 FRKVGNINGALDIFQEMISSGVYPDTITIRNM 655
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 62/130 (47%), Gaps = 1/130 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ PD ++Y+ +ID CK ++++A ++ M + SP+V+++ ++I G G+
Sbjct: 535 MPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGR 594
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D ++ EM G DA Y I + + A + EM+ G+ P+ T
Sbjct: 595 VDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRN 654
Query: 121 FFRVFYWSND 130
F WS +
Sbjct: 655 MLTGF-WSKE 663
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 54/106 (50%), Gaps = 3/106 (2%)
Query: 4 MGVK---PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MG K P++V++N LI+ YCK +V+ ++ +M I D I Y ++I G VG
Sbjct: 570 MGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGN 629
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEM 106
+ A D+ +EM G YPD + + + L A +++++
Sbjct: 630 INGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDL 675
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 86/204 (42%), Gaps = 5/204 (2%)
Query: 24 RQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAY 83
+ +E A + M P VI + ++G + + +PD + ++M+ D ++
Sbjct: 60 KGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSF 119
Query: 84 NAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMG 143
I+ +C +L A ++ + GL P+ T+ + + + +L+ ++
Sbjct: 120 TILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI-- 177
Query: 144 TGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVE 203
C P+ + L+ R+ +V A+ L + MVE G + D +C MG V
Sbjct: 178 --CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVS 235
Query: 204 AEKSFLEMIEKGH-KPSQVSFRRI 226
A +M E H KP+ V + I
Sbjct: 236 ALNLLRKMEEISHIKPNVVIYSAI 259
>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 116/224 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E +K D V Y+ +ID CKD ++ A+ + +M + D+I YT++I G G+
Sbjct: 238 MEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGR 297
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D +L++M + PD A++A I + +LR+A L EM+++G+SP+ TY
Sbjct: 298 WDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTS 357
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F N L + ++ M+ GC PN ++ L+ + ++ L+L+ M +G
Sbjct: 358 LIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRG 417
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
+ + + L C++GKL A++ F EM+ + +P VS++
Sbjct: 418 VVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYK 461
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 110/213 (51%), Gaps = 4/213 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G K DI+ Y LI +C + + K++ M I+PDV++++++I G+ +A
Sbjct: 277 GFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREA 336
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++ KEM + G PD Y + I +C +L A+ ++D MV KG PN T+N+
Sbjct: 337 EELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILING 396
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ +N + L+ +M G + +T + L++ K+E+A +L+ +MV +
Sbjct: 397 YCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPD 456
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHK 217
I+ +L D LCD G E EK+ LE+ EK K
Sbjct: 457 IVSYKILLDGLCDNG---EPEKA-LEIFEKIEK 485
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 113/253 (44%), Gaps = 35/253 (13%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ PD+V+++ LID + K+ ++ +A ++ ++M ISPD ++YTS+I G Q DKA
Sbjct: 313 ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKAN 372
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+L M GC P+ +N I YC A + D L +M +G+ + TYN + F
Sbjct: 373 HMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGF 432
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQE--------------KVEIAL 170
L + L+ M+ P+ S L+ LC E K+E+ +
Sbjct: 433 CELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDI 492
Query: 171 QLWNDMVE--------------------KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLE 210
++N ++ KG + +++ LC G L EA+ F +
Sbjct: 493 GIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRK 552
Query: 211 MIEKGHKPSQVSF 223
M E GH P+ ++
Sbjct: 553 MEEDGHSPNGCTY 565
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 106/220 (48%), Gaps = 2/220 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ ++ + + +I+ C+ R++ A+ + K+ PD ++++++I GL L G+ +A
Sbjct: 102 GIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEA 161
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+++ M E G P NA + C+ ++ DA L+D MVE G PN TY +V
Sbjct: 162 LELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKV 221
Query: 125 FYWSNDLRSSWNLYCRMMGTGC-LPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
S + L +M L + + + LCK ++ A L+N+M KGF +
Sbjct: 222 MCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCK-DGSLDNAFNLFNEMEIKGFKA 280
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I++ L C G+ + K +MI++ P V+F
Sbjct: 281 DIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAF 320
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 104/208 (50%), Gaps = 4/208 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV D V+YN LI +C+ ++E A ++ ++M + PD++SY ++ GL G+P+KA
Sbjct: 417 GVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKA 476
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++ +++++ D YN I C A ++ DA L + KG+ P+ TYN+
Sbjct: 477 LEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGG 536
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
L + L+ +M G PN + L++ + + +L ++ GF
Sbjct: 537 LCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVD 596
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMI 212
++ D+L D G+L +KSFL+M+
Sbjct: 597 ASTVKMVVDMLSD-GRL---KKSFLDML 620
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 91/228 (39%)
Query: 23 DRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAA 82
D + + A + ++M P +I ++ + + Q D D+ K+M+ G +
Sbjct: 50 DIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYT 109
Query: 83 YNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMM 142
+ I C ++L A M ++++ G P+ T++ + + L RM+
Sbjct: 110 LSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMV 169
Query: 143 GTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLV 202
G P + LV KV A+ L + MVE GF + + ++C G+
Sbjct: 170 EMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTA 229
Query: 203 EAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFG 250
A + +M E+ K V + I + + NL N+M + G
Sbjct: 230 LAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 277
>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
Length = 924
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 113/258 (43%), Gaps = 35/258 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ PD+ +Y+ LI+ YCK R +E A K+VE+MR+ S +V++Y ++IGGL G
Sbjct: 234 MEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGA 293
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A KEM++YG PD Y A I C R A L+DEM GL PN Y+
Sbjct: 294 IEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYST 353
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCK------------------ 161
F + ++ + M G PN + L++ LCK
Sbjct: 354 LIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIG 413
Query: 162 ----------------RQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
RQ E A L N+M + G + ++ + LC +G+ A
Sbjct: 414 YMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERAS 473
Query: 206 KSFLEMIEKGHKPSQVSF 223
+MI G KP+ +
Sbjct: 474 GLLEQMIADGLKPNAFVY 491
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 119/242 (49%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ P++V Y+ LID + + ++A+KIV++M + P+ I+Y ++I GL +G+ +A
Sbjct: 343 GLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRA 402
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+LK+M + G D YN I + +A L++EM + G+SPN TY++
Sbjct: 403 SRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIING 462
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + L +M+ G PN L+ R+ +A + M +
Sbjct: 463 LCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPD 522
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSN 244
+ + L L ++GK+ EA + + EM+EKG +P+ ++ + +A E + L +
Sbjct: 523 LYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLH 582
Query: 245 KM 246
+M
Sbjct: 583 QM 584
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 102/216 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ P+ Y +++ Y K +EK ++ M ++ + PD Y +I L G
Sbjct: 584 MLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGH 643
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A VL +++ G PD+ Y + I +C A + A GL+DEM +KG+ P + YN
Sbjct: 644 MQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNA 703
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F S+D+ + N++ ++ G PN + L+ + + A+ L+N+M+ +G
Sbjct: 704 LIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEG 763
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGH 216
V VL + G L +A EMI +G+
Sbjct: 764 VAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARGY 799
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 101/215 (46%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+KP+ Y LI YC++ A + ++KM E+++PD+ Y S+I GL VG+ D+A
Sbjct: 483 GLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEA 542
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ EM E G P+ Y I Y +A L A L+ +M+ GL+PN Y
Sbjct: 543 IEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEG 602
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
++ S++L + M+ G +P+ + ++ ++ A+ + + + + G
Sbjct: 603 YFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPD 662
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
L+ L C + +A EM +KG +P
Sbjct: 663 SLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPG 697
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 102/210 (48%), Gaps = 1/210 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ PD + Y LI +CK +EKA ++++M + I P + Y ++I G A
Sbjct: 658 GLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHA 717
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
R++ + G P+ Y I YC A +RDA L +EM+ +G++P+A Y++
Sbjct: 718 RNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAG 777
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
S DL+ + + M+ G + + CKR K++ ++ + M++K
Sbjct: 778 CSNSGDLQQALFITEEMIARGYAIISSFNTLVHGFCKRG-KLQETVKFLHVMMDKDIVPS 836
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEK 214
+L + + L + GKL EA F+E+ +K
Sbjct: 837 LLTVENIVIGLGEAGKLSEAHTIFVELQQK 866
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 106/240 (44%), Gaps = 1/240 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+++G+ P + N L+ + ++ +K+ M ISPDV +Y+++I V
Sbjct: 199 MKDLGLAPSLRCCNGLLKDLLRADALDLLWKVRGFMEGAGISPDVYTYSTLIEAYCKVRD 258
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A+ V++EM+E GC + YN I C A + +A G EM + GL P+ TY
Sbjct: 259 LESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFGYKKEMEDYGLVPDGFTYGA 318
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L M G +PN L+ RQ + A ++ +M G
Sbjct: 319 IINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAG 378
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
+ D L LC +G++ A + +M + G+ +++ I+ + NK+EA
Sbjct: 379 VQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAF 438
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 100/214 (46%), Gaps = 1/214 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G+ P++ +Y+ +I+ C+ + E+A ++E+M + + P+ Y +I G G
Sbjct: 444 MRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGS 503
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A + LK+M PD YN+ I ++ +A DEM+EKG PN TY
Sbjct: 504 FSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGG 563
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + +L + L +M+ +G PN +++ + + +E M+EKG
Sbjct: 564 LIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKG 623
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEK 214
+ ++ L G + +A S L +IEK
Sbjct: 624 LMPDNRLYGIVIHNLSSSGHM-QAAVSVLSVIEK 656
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 56/112 (50%), Gaps = 15/112 (13%)
Query: 10 IVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLK 69
I S+N L+ +CK ++++ K + M D+DI P +++ +I+ GLG G+ +A +
Sbjct: 802 ISSFNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSLLTVENIVIGLGEAGKLSEAHTIFV 861
Query: 70 EMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
E+++ NA+ R+ S L +M+ +GL P +N+
Sbjct: 862 ELQQ---------KNASHRD------TDHLSSLFTDMINQGLVPLDVIHNMI 898
Score = 37.7 bits (86), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 60/140 (42%)
Query: 87 IRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGC 146
+ Y R+RD + ++ M + GL+P+ N + ++ L W + M G G
Sbjct: 180 VDTYKKTGRVRDGAEVVLLMKDLGLAPSLRCCNGLLKDLLRADALDLLWKVRGFMEGAGI 239
Query: 147 LPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEK 206
P+ + L++ + +E A ++ +M E G ++ + L LC G + EA
Sbjct: 240 SPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFG 299
Query: 207 SFLEMIEKGHKPSQVSFRRI 226
EM + G P ++ I
Sbjct: 300 YKKEMEDYGLVPDGFTYGAI 319
>gi|297842515|ref|XP_002889139.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297334980|gb|EFH65398.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 482
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 131/249 (52%), Gaps = 1/249 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G PDIV+Y+ ++D+ CK +V++A IV M P Y+ ++ G +
Sbjct: 228 MVDAGSLPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTETR 287
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A D EM+ G D A +N+ I +C R+++ ++ EM KG++PN+ + N+
Sbjct: 288 LEEAVDTFLEMERSGMKADVAVFNSLIGAFCKTNRMKNVYRVLKEMKSKGVTPNSKSCNI 347
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
R + +++++ +M+ C P+ + ++K+ ++++E A ++W M +KG
Sbjct: 348 ILRHLIDRGEKDEAFDVFRKMIKV-CEPDADTYTMMIKMFCEKKEMETADKVWKYMRKKG 406
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ VL + LC+ +A EMIE G +PS +F R++ L+ ++++ L+
Sbjct: 407 VFPSMHTFSVLINGLCEEPNTQKACVLLEEMIEMGIRPSGATFGRLRQLLLKEDREDVLK 466
Query: 241 NLSNKMALF 249
L+ KM +
Sbjct: 467 FLNEKMNVL 475
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 95/214 (44%), Gaps = 2/214 (0%)
Query: 10 IVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLK 69
+ +Y+ +I+ K RQ + + ++ M + + +V ++ ++ + D+A
Sbjct: 99 VRAYHMMIESTAKIRQYKLMWDLINAMMKKKML-NVETFCIVMRKYARAQKVDEAIYAFN 157
Query: 70 EMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSN 129
M++Y P+ A+N + C +K +R A + + M ++ +P++ TY++ +
Sbjct: 158 VMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEIFENMRDR-FTPDSKTYSILLEGWGKEP 216
Query: 130 DLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSD 189
+L + ++ M+ G LP+ + +V + + +V+ AL + M +
Sbjct: 217 NLPKAREVFREMVDAGSLPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYS 276
Query: 190 VLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
VL +L EA +FLEM G K F
Sbjct: 277 VLVHTYGTETRLEEAVDTFLEMERSGMKADVAVF 310
>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 504
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 137/274 (50%), Gaps = 36/274 (13%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ PD+V++ LID K +V++AYKI E M + +P++++Y S++ GL L Q D A
Sbjct: 179 GILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHA 238
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ + M E G D +YN I YC + + +A L +M + L+P+ TTY + +
Sbjct: 239 VRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKA 298
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKR---QEKVEI------------ 168
Y + +R++ L+ M G P+ + L+ LCK +E +++
Sbjct: 299 LYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPS 358
Query: 169 -------------------ALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFL 209
A+++++++ G I+ +++ + LC GKL+EAE+ F+
Sbjct: 359 IRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFV 418
Query: 210 EMIEKGHKPSQVSFRR-IKALMELANKQEALQNL 242
+M E G + ++SF I+ ++ Q+A++ L
Sbjct: 419 QMEESGCEQDEISFNFIIRGFLQENQVQKAMEFL 452
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 116/250 (46%), Gaps = 8/250 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G + DI+ Y LI+ K RQ +A ++ +M E S + +Y +I L G
Sbjct: 35 MTRSGFQGDILLYGYLINALRKTRQARRAVELHRRMLSEICSGNFFTYGLVIDSLCKDGL 94
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
K + +EM G P+ Y++ I C +LR+A L DEMV +G+ N TYN
Sbjct: 95 AIKGLKMFREMINMGICPNVIVYSSLINGLCRVGKLREAVNLFDEMVSQGIKANVITYNS 154
Query: 121 FF----RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDM 176
R W R+ + +M+G G LP+ + L+ ++ KV+ A +++ M
Sbjct: 155 LIHASCRFGLWKEATRT----FSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELM 210
Query: 177 VEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQ 236
+++G I+ + L + LC ++ A + F M+E+G K +S+ + + K
Sbjct: 211 IKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKT 270
Query: 237 EALQNLSNKM 246
E L KM
Sbjct: 271 EEAMTLFRKM 280
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 105/219 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+K ++++YN LI C+ ++A + +M E I PDV+++T++I L G+
Sbjct: 140 MVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGK 199
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + + M + G P+ YN+ + C+ ++ A L + MVE+G+ + +YN
Sbjct: 200 VQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNT 259
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ S + L+ +M P+ + L+K + ++ A +L+N+M G
Sbjct: 260 LINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQICG 319
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
+ VL D LC G + EA F + +KPS
Sbjct: 320 QSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPS 358
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 119/253 (47%), Gaps = 4/253 (1%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
+ +Y +ID CKD K K+ +M + I P+VI Y+S+I GL VG+ +A ++
Sbjct: 78 NFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCRVGKLREAVNLF 137
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
EM G + YN+ I C ++A+ +MV +G+ P+ T+
Sbjct: 138 DEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKK 197
Query: 129 NDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVS 188
++ ++ ++ M+ G PN + L+ +++ A++L+ MVE+G ++
Sbjct: 198 GKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISY 257
Query: 189 DVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEALQNLSNKMA 247
+ L + C GK EA F +M + PS ++ +KAL + + A + L N M
Sbjct: 258 NTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTA-KELFNNMQ 316
Query: 248 LFGPSMIPKREEY 260
+ G S P + Y
Sbjct: 317 ICGQS--PSLDTY 327
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 116/256 (45%), Gaps = 36/256 (14%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+K D++SYN LI+ YC + E+A + KM+ E+++P + +YT ++ L G+
Sbjct: 245 MVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGR 304
Query: 61 PDKARDVLKEMK-------------------EYGCYPDAA---------AYNAAIRNYCI 92
A+++ M+ + GC +A Y +IR Y I
Sbjct: 305 IRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSI 364
Query: 93 -------AKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
A+R A + DE+ GL PN TYN+ L + L+ +M +G
Sbjct: 365 LIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESG 424
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
C + S F+++ ++ +V+ A++ M EK F V+ +L +L + E
Sbjct: 425 CEQDEISFNFIIRGFLQENQVQKAMEFLKRMREKNFSPNDSVTLMLVNLYAADAQSSELP 484
Query: 206 KSFL-EMIEKGHKPSQ 220
+FL E+++K +Q
Sbjct: 485 NNFLHELVQKKTLKTQ 500
>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
Length = 735
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 116/224 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E +K D V Y+ +ID CKD ++ A+ + +M + D+I YT++I G G+
Sbjct: 238 MEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGR 297
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D +L++M + PD A++A I + +LR+A L EM+++G+SP+ TY
Sbjct: 298 WDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTS 357
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F N L + ++ M+ GC PN ++ L+ + ++ L+L+ M +G
Sbjct: 358 LIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRG 417
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
+ + + L C++GKL A++ F EM+ + +P VS++
Sbjct: 418 VVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYK 461
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 110/213 (51%), Gaps = 4/213 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G K DI+ Y LI +C + + K++ M I+PDV++++++I G+ +A
Sbjct: 277 GFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREA 336
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++ KEM + G PD Y + I +C +L A+ ++D MV KG PN T+N+
Sbjct: 337 EELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILING 396
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ +N + L+ +M G + +T + L++ K+E+A +L+ +MV +
Sbjct: 397 YCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPD 456
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHK 217
I+ +L D LCD G E EK+ LE+ EK K
Sbjct: 457 IVSYKILLDGLCDNG---EPEKA-LEIFEKIEK 485
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 113/253 (44%), Gaps = 35/253 (13%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ PD+V+++ LID + K+ ++ +A ++ ++M ISPD ++YTS+I G Q DKA
Sbjct: 313 ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKAN 372
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+L M GC P+ +N I YC A + D L +M +G+ + TYN + F
Sbjct: 373 HMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGF 432
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQE--------------KVEIAL 170
L + L+ M+ P+ S L+ LC E K+E+ +
Sbjct: 433 CELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDI 492
Query: 171 QLWNDMVE--------------------KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLE 210
++N ++ KG + +++ LC G L EA+ F +
Sbjct: 493 GIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRK 552
Query: 211 MIEKGHKPSQVSF 223
M E GH P+ ++
Sbjct: 553 MEEDGHSPNGCTY 565
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 106/220 (48%), Gaps = 2/220 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ ++ + + +I+ C+ R++ A+ + K+ PD ++++++I GL L G+ +A
Sbjct: 102 GIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEA 161
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+++ M E G P NA + C+ ++ DA L+D MVE G PN TY +V
Sbjct: 162 LELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKV 221
Query: 125 FYWSNDLRSSWNLYCRMMGTGC-LPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
S + L +M L + + + LCK ++ A L+N+M KGF +
Sbjct: 222 MCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCK-DGSLDNAFNLFNEMEIKGFKA 280
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I++ L C G+ + K +MI++ P V+F
Sbjct: 281 DIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAF 320
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 95/228 (41%), Gaps = 16/228 (7%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
V+PDIVSY L+D C + + EKA +I EK+ + D+ Y II G+ + D A
Sbjct: 453 VRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAW 512
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
D+ + G PD YN I C L +A L +M E G SPN TYN+ R
Sbjct: 513 DLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAH 572
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
D S L + + C F V + AL M++ G +
Sbjct: 573 LGEGDATKSAKL---------IEEIKRCGFSVD----ASTLRFALSTLARMLKAGHEPDV 619
Query: 186 LVSDVLFDLLC--DMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALM 230
L C + + +A F M G+KP+ V++ IK L+
Sbjct: 620 FTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLL 667
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 100/219 (45%), Gaps = 13/219 (5%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV D V+YN LI +C+ ++E A ++ ++M + PD++SY ++ GL G+P+KA
Sbjct: 417 GVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKA 476
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++ +++++ D YN I C A ++ DA L + KG+ P+ TYN+
Sbjct: 477 LEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGG 536
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
L + L+ +M G PN + L++ + + +L ++ GF
Sbjct: 537 LCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFS-- 594
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
D L A + M++ GH+P +F
Sbjct: 595 -----------VDASTLRFALSTLARMLKAGHEPDVFTF 622
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 76/183 (41%), Gaps = 25/183 (13%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GVKPD+ +YN +I CK + +A + KM ++ SP+ +Y +I G K+
Sbjct: 522 GVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKS 581
Query: 65 RDVLKEMK----------------------EYGCYPDAAAYNAAIRNYCIAKR--LRDAS 100
+++E+K + G PD + +R +C+ + + DA
Sbjct: 582 AKLIEEIKRCGFSVDASTLRFALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAP 641
Query: 101 GLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKL 159
L M G PN TYN + N + + +M GC PN + F+ L
Sbjct: 642 TLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISGL 701
Query: 160 CKR 162
CK+
Sbjct: 702 CKQ 704
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 66/166 (39%), Gaps = 25/166 (15%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDIS------------------ 42
M E G P+ +YN LI + + K+ K++E+++ S
Sbjct: 553 MEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLK 612
Query: 43 ----PDVISYTSIIGGLGLVGQPD--KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRL 96
PDV ++T+++ L A + K MK G P+ YN I+ +
Sbjct: 613 AGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMI 672
Query: 97 RDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMM 142
G++D+M E+G PNA T + F DL S L R M
Sbjct: 673 SQVPGVLDQMFERGCQPNAVTKSTFISGL-CKQDLHGSAILLLRKM 717
Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 82/204 (40%)
Query: 23 DRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAA 82
D + + A + ++M P +I ++ + + Q D D+ K+M+ G +
Sbjct: 50 DIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYT 109
Query: 83 YNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMM 142
+ I C ++L A M ++++ G P+ T++ + + L RM+
Sbjct: 110 LSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMV 169
Query: 143 GTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLV 202
G P + LV KV A+ L + MVE GF + + ++C G+
Sbjct: 170 EMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTA 229
Query: 203 EAEKSFLEMIEKGHKPSQVSFRRI 226
A + +M E+ K V + I
Sbjct: 230 LAMELLRKMEERKIKLDAVKYSII 253
>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g41170, mitochondrial; Flags: Precursor
gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 527
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 111/214 (51%), Gaps = 3/214 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + +KPD++++N LID + K+ + A ++ +M I+P++ +YTS+I G + G
Sbjct: 238 MTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGC 297
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+AR + M+ GC+PD AY + I +C K++ DA + EM +KGL+ N TY
Sbjct: 298 VDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTT 357
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK- 179
+ F + ++ M+ G PN ++ L+ KV+ AL ++ DM ++
Sbjct: 358 LIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKRE 417
Query: 180 --GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEM 211
G I +VL LC GKL +A F +M
Sbjct: 418 MDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDM 451
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 108/219 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M EMG+KPD+V Y +ID CK+ V A + ++M + I PDV+ YTS++ GL G+
Sbjct: 168 MVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGR 227
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +L+ M + PD +NA I + + DA L +EM+ ++PN TY
Sbjct: 228 WRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTS 287
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + + ++ M GC P+ + L+ + +KV+ A++++ +M +KG
Sbjct: 288 LINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKG 347
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
+ L +GK A++ F M+ +G P+
Sbjct: 348 LTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPN 386
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 110/226 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++G +PDIV++ LI+ +C ++E+A +V +M + I PDV+ YT+II L G
Sbjct: 133 MMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGH 192
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A + +M+ YG PD Y + + C + R RDA L+ M ++ + P+ T+N
Sbjct: 193 VNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNA 252
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + LY M+ PN + L+ + V+ A Q++ M KG
Sbjct: 253 LIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKG 312
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ L + C K+ +A K F EM +KG + +++ +
Sbjct: 313 CFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTL 358
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 97/218 (44%), Gaps = 38/218 (17%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD+V+Y LI+ +CK ++V+ A KI +M + ++ + I+YT++I G G VG+
Sbjct: 308 METKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGK 367
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEK---GLSPNATT 117
P+ A++V M G P+ YN + C +++ A + ++M ++ G++PN T
Sbjct: 368 PNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWT 427
Query: 118 YNLFFRVFYWSNDL-----------------------------------RSSWNLYCRMM 142
YN+ ++ L +++ NL+C +
Sbjct: 428 YNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLP 487
Query: 143 GTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
G PN + ++ R+ A L+ M E G
Sbjct: 488 SKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDG 525
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 97/223 (43%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
MGV D+ + N L++ +C+ Q A + KM PD++++TS+I G L + ++
Sbjct: 101 MGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEE 160
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
A ++ +M E G PD Y I + C + A L D+M G+ P+ Y
Sbjct: 161 AMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVN 220
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
S R + +L M P+ + L+ ++ K A +L+N+M+
Sbjct: 221 GLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAP 280
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
I L + C G + EA + F M KG P V++ +
Sbjct: 281 NIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSL 323
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/219 (20%), Positives = 95/219 (43%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P I+ + L++V K ++ + + + ++ +S D+ + ++ QP A
Sbjct: 70 PSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSF 129
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L +M + G PD + + I +C+ R+ +A ++++MVE G+ P+ Y
Sbjct: 130 LGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCK 189
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ + + +L+ +M G P+ LV + A L M ++ ++
Sbjct: 190 NGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVIT 249
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ L D GK ++AE+ + EMI P+ ++ +
Sbjct: 250 FNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSL 288
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/203 (19%), Positives = 88/203 (43%), Gaps = 2/203 (0%)
Query: 25 QVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYN 84
Q +A + M + P +I +T ++ + + + D ++ ++ G D N
Sbjct: 52 QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111
Query: 85 AAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGT 144
+ +C + + AS + +M++ G P+ T+ F N + + ++ +M+
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171
Query: 145 GCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVE 203
G P+ ++ LCK V AL L++ M G +++ L + LC+ G+ +
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGH-VNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRD 230
Query: 204 AEKSFLEMIEKGHKPSQVSFRRI 226
A+ M ++ KP ++F +
Sbjct: 231 ADSLLRGMTKRKIKPDVITFNAL 253
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 57/113 (50%), Gaps = 3/113 (2%)
Query: 2 REM-GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
REM GV P+I +YN L+ C + ++EKA + E MR ++ +I+YT II G+ G+
Sbjct: 416 REMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGK 475
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRD-ASGLMDEMVEKGLS 112
A ++ + G P+ Y I + L+ A L +M E G+S
Sbjct: 476 VKNAVNLFCSLPSKGVKPNVVTYTTMISGL-FREGLKHEAHVLFRKMKEDGVS 527
>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 1032
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 117/224 (52%), Gaps = 5/224 (2%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV PD+ YN LI +CK+ +EKA ++ ++M I+P+++ Y ++I GL +G+ KA
Sbjct: 656 GVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKA 715
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
R++ E++E PD Y+ I YC + L +A L DEM+ KG+SP+ Y +
Sbjct: 716 RELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDG 775
Query: 125 FYWSNDLRSSWNLY--CRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
+L + +L+ + G L S + CK + +E A +L++DMV+K
Sbjct: 776 CGKEGNLEKALSLFHEAQQKSVGSLSAFNS--LIDSFCKHGKVIE-ARELFDDMVDKKLT 832
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
I+ +L D + EAE+ FL+M + P+ +++ +
Sbjct: 833 PNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSL 876
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 110/223 (49%), Gaps = 1/223 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+ PDI +Y+ +I K+ + ++A + K + PDV Y S+I G G
Sbjct: 617 MLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGD 676
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA + EM G P+ YN I C + A L DE+ EK L P+ TY+
Sbjct: 677 IEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYST 736
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ S +L ++ L+ M+ G P+ L+ C ++ +E AL L+++ +K
Sbjct: 737 IIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKS 796
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
GS + + L D C GK++EA + F +M++K P+ V++
Sbjct: 797 VGS-LSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTY 838
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 120/240 (50%), Gaps = 3/240 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ P+ +Y LID + K+ +E+A +I ++M + +V++Y ++IGG+ G+
Sbjct: 337 MPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGE 396
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA + EM G PD YN I Y + + A L+ EM + L+P+ TY++
Sbjct: 397 MAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSV 456
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
S+DL+ + + +M+ G PN L+K ++ + E+A++L M+ G
Sbjct: 457 LISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANG 516
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ + L LC K+ EA+ ++M EKG KP+ ++ A + L +K +Q
Sbjct: 517 VLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTY---GAFINLYSKSGEIQ 573
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 105/219 (47%), Gaps = 2/219 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+KP+ +Y I++Y K +++ A + + M I P+ + YT +I G VG
Sbjct: 547 MGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGN 606
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A K M E G PD AY+A I + + ++A G+ + ++ G+ P+ YN
Sbjct: 607 TVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNS 666
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
F D+ + LY M+ G PN L+ LCK E V A +L++++ EK
Sbjct: 667 LISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGE-VTKARELFDEIEEK 725
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
++ + D C G L EA K F EMI KG P
Sbjct: 726 DLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISP 764
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 108/222 (48%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV PD+ YNCLI C+ ++VE+A ++ M ++ I P+ +Y + I G+ A
Sbjct: 516 GVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVA 575
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
K+M G P+ Y I+ +C +A M+EKGL P+ Y+
Sbjct: 576 ERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHS 635
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + + ++ + + TG +P+ L+ ++ +E A QL+++M+ G
Sbjct: 636 LSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPN 695
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
I+V + L + LC +G++ +A + F E+ EK P V++ I
Sbjct: 696 IVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTI 737
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 111/250 (44%), Gaps = 37/250 (14%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G++PD +YN LID Y K + KA +++ +M+ ++P +Y+ +I GL KA
Sbjct: 411 GLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKA 470
Query: 65 RDVLKEM----------------KEY-------------------GCYPDAAAYNAAIRN 89
+VL +M K Y G PD YN I
Sbjct: 471 NEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIG 530
Query: 90 YCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPN 149
C AK++ +A L+ +M EKG+ PNA TY F ++ S +++ + + M+ +G +PN
Sbjct: 531 LCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPN 590
Query: 150 TQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSF 208
L+K C VE AL + M+EKG I + L GK EA F
Sbjct: 591 NVIYTILIKGHCDVGNTVE-ALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVF 649
Query: 209 LEMIEKGHKP 218
L+ ++ G P
Sbjct: 650 LKFLKTGVVP 659
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 100/223 (44%), Gaps = 1/223 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E + PD+ +Y +I +CK V K ++ +M E P++ +Y + IGGL G
Sbjct: 233 MVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKE-CKPNLFTYNAFIGGLCQTGA 291
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A +V K M E G PD Y + +C KR ++A + + M GL+PN TY
Sbjct: 292 VDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTA 351
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F ++ + + M+ G N + ++ + ++ A+ L+N+M+ G
Sbjct: 352 LIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAG 411
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++L D + +A + EM + PS ++
Sbjct: 412 LEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTY 454
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 102/220 (46%), Gaps = 1/220 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G P ++ N L+ K + +K+ M + I PDV +YT++I VG K
Sbjct: 202 GFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKG 261
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ VL EM E C P+ YNA I C + +A + M+EKGL P+ TY L
Sbjct: 262 KMVLSEM-EKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDG 320
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
F + + ++ M +G PN + L+ ++ +E AL++ ++M+ +G
Sbjct: 321 FCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLN 380
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
++ + + + G++ +A F EM+ G +P ++
Sbjct: 381 VVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYN 420
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 58/111 (52%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + + P+IV+Y LID Y K +E+A ++ M +I P+ ++YTS++ +G
Sbjct: 826 MVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGN 885
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGL 111
K + K+M+ G DA AY YC + +A L+++ + +G+
Sbjct: 886 RFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGI 936
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 82/167 (49%), Gaps = 4/167 (2%)
Query: 12 SYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEM 71
++N LID +CK +V +A ++ + M D+ ++P++++YT +I G ++A + +M
Sbjct: 802 AFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDM 861
Query: 72 KEYGCYPDAAAYNAAIRNYC-IAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSND 130
+ P+ Y + + +Y I R + S L +M +G++ +A Y + +
Sbjct: 862 ETRNIIPNTLTYTSLLLSYNQIGNRFKMIS-LFKDMEARGIACDAIAYGVMASAYCKEGK 920
Query: 131 LRSSWNLYCRMMGTGC-LPNTQSCMFLVKLCKRQEKVEIALQLWNDM 176
+ L + + G L + + LCK ++++ L+L ++M
Sbjct: 921 SLEALKLLNKSLVEGIKLEDDVFDALIFHLCK-EKQISTVLELLSEM 966
>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Cucumis sativus]
Length = 645
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 126/247 (51%), Gaps = 1/247 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MRE+GV P++ +YN L+D YCK ++A ++ + M E + PDV+++ +I GL G+
Sbjct: 243 MREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGE 302
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
AR++ M ++ P+ A YN+ I YC + +A L E+ +SP+ TY++
Sbjct: 303 MKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSI 362
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
R + + N++ +M G L N+ + L+ C ++ K++ AL++ + M E G
Sbjct: 363 LIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENG 422
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
++ L D C + L A + EM+ K P V++ I + + +EAL
Sbjct: 423 VEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEAL 482
Query: 240 QNLSNKM 246
+ S+ +
Sbjct: 483 KLYSDML 489
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 117/241 (48%), Gaps = 10/241 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + V P+I YN LID YCK V +A + ++ ++SPDV +Y+ +I GL V +
Sbjct: 313 MIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSR 372
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A ++ ++M + G ++ YN+ I C ++ A + +M E G+ PN T++
Sbjct: 373 TEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFST 432
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ +L+++ +Y M+ P+ + ++ + ++ AL+L++DM++ G
Sbjct: 433 LIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNG 492
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIE----------KGHKPSQVSFRRIKALM 230
L D LC GK+ +A + F E IE G KPS + AL+
Sbjct: 493 ITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALI 552
Query: 231 E 231
Sbjct: 553 H 553
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 117/248 (47%), Gaps = 4/248 (1%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
++G I + N L+ V K + E ++I E+M +SP VI++ ++I G G
Sbjct: 139 HKVGAALTIQACNVLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDL 198
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
+A+++ EM+ G P Y IR C ++ +A + M E G+ PN TYN
Sbjct: 199 LRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTL 258
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKG 180
+ + + + LY M+G G +P+ + L+ LCK E ++ A L+ +M++
Sbjct: 259 MDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGE-MKAARNLFVNMIKFS 317
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEAL 239
I V + L D C +G + EA FLE+ P ++ I+ L ++ +EA
Sbjct: 318 VTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEA- 376
Query: 240 QNLSNKMA 247
N+ KM
Sbjct: 377 GNIFEKMT 384
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 106/222 (47%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ P ++++ LID C+ + +A ++ ++MR + I P VI YT +I GL + ++A
Sbjct: 177 GLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEA 236
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ + M+E G YP+ YN + YC + A L +M+ +GL P+ T+ +
Sbjct: 237 ESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDG 296
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+++++ NL+ M+ PN L+ + V A+ L+ ++
Sbjct: 297 LCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPD 356
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ +L LC + + EA F +M ++G + V++ +
Sbjct: 357 VFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSL 398
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 73/164 (44%), Gaps = 18/164 (10%)
Query: 3 EMGVK---PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVG 59
EM +K PD+V+Y +ID +CK +++A K+ M D I+P+ + + ++ GL G
Sbjct: 452 EMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDG 511
Query: 60 QPDKARDVLKEMKEYG---CYPDAA----------AYNAAIRNYCIAKRLRDASGLMDEM 106
+ A ++ E E+ C DA AY A I C + A L +M
Sbjct: 512 KISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDM 571
Query: 107 VEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNT 150
GL P+ Y + R + + L+ M+ G +PN+
Sbjct: 572 RRYGLQPDEVIYVVMLRGLFQVKYIL--MMLHADMLKFGVIPNS 613
>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 111/223 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G+KP++V+YN +I YC +VE A I + M+ + PD +Y S I G+ G+
Sbjct: 217 MEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGK 276
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A +L++MKE G P A YN I YC L A D+MV +GL P +TYN+
Sbjct: 277 LEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNM 336
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + + M G +P++ + L+ R V+ A L ++M+ KG
Sbjct: 337 LIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKG 396
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ L +L G++ +A+ F +++ KG P + F
Sbjct: 397 IQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMF 439
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 130/256 (50%), Gaps = 2/256 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M M +K +V++N +I+V CK+ +++KA + + M I P+V++Y +II G G+
Sbjct: 182 MFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGR 241
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ AR + MK G PD+ Y + I C +L +ASG++++M E GL P A TYN
Sbjct: 242 VEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNT 301
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ +L +++ +M+ G +P + L+ K++ A + +M EKG
Sbjct: 302 LIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKG 361
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ ++L + C G + +A EMI KG +P++V++ + ++ + +
Sbjct: 362 LVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQAD 421
Query: 241 NLSNKMALFG--PSMI 254
+L K+ G P +I
Sbjct: 422 DLFEKIVRKGIFPDLI 437
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 112/230 (48%), Gaps = 8/230 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E+G++P V+YN LID YC +E A+ +KM E + P V +Y +I L L +
Sbjct: 287 MKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCK 346
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A ++KEM E G PD+ YN I YC ++ A L DEM+ KG+ P TY
Sbjct: 347 MDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTS 406
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
V ++ + +L+ +++ G P+ L+ ++ A + +M +
Sbjct: 407 LIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMK 466
Query: 181 FGSYILVSDVLFDLL----CDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ +V F+ L C GK+ A + EM +G KP +S+ +
Sbjct: 467 ----VVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTL 512
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 112/223 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+ PD V+YN LI+ YC+ V+KA+ + ++M + I P ++YTS+I L G+
Sbjct: 357 MSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGR 416
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A D+ +++ G +PD +NA I +C + A ++ EM + + P+ T+N
Sbjct: 417 MKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNT 476
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + ++ L M G P+ S L+ ++ ++ A ++ ++M+ G
Sbjct: 477 LMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIG 536
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
F +L + L LC + AE+ EMI KG P+ ++
Sbjct: 537 FNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTY 579
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 84/154 (54%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ PD++ +N LID +C + +++A+ ++++M + PD +++ +++ G G+ + A
Sbjct: 431 GIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAA 490
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
R++++EMK G PD +YN I Y ++DA + DEM+ G +P TYN +
Sbjct: 491 RELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQG 550
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK 158
+ + + L M+ G PN + + L++
Sbjct: 551 LCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIE 584
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 49/87 (56%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G+KPD +SYN LI Y K ++ A+++ ++M +P +++Y ++I GL +
Sbjct: 497 MKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEE 556
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAI 87
D A +LKEM G P+ Y + I
Sbjct: 557 GDHAEQLLKEMISKGITPNDNTYLSLI 583
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/258 (20%), Positives = 109/258 (42%), Gaps = 5/258 (1%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
+G+K ++ Y+ LI C+ ++ + A++ + M+ + + P V + ++ + +K
Sbjct: 116 LGIKTYVL-YDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEK 174
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
A + EM +N I C +L+ A + M G+ PN TYN
Sbjct: 175 AWVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIH 234
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
+ + + ++ M G P++ + F+ +CK + K+E A + M E G
Sbjct: 235 GYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCK-EGKLEEASGMLEKMKEIGLR 293
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNL 242
+ + L D C+ G L A +M+ +G P+ ++ + + L K + +
Sbjct: 294 PTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGI 353
Query: 243 SNKMALFGPSMIPKREEY 260
+M+ G ++P Y
Sbjct: 354 IKEMSEKG--LVPDSVTY 369
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 37/58 (63%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLV 58
M +G P +++YN LI CK+ + + A +++++M + I+P+ +Y S+I G+G V
Sbjct: 532 MLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIEGIGNV 589
>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 821
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 129/249 (51%), Gaps = 2/249 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GVKP ++++N +I++ CK +V++A + K+ D+ PD +YTS+I G + DKA
Sbjct: 192 GVKPSLLTFNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKA 251
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+V M + GC P++ Y+ I C R+ +A +++EM EKG+ P TY +
Sbjct: 252 FEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISS 311
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + NL M GC P+ Q+ ++ R K+E+A+ +++ M+++G
Sbjct: 312 LCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPN 371
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLS 243
+ + L + LC G+ A K F M G + ++ + IK L + + ++A+ +
Sbjct: 372 TVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMV-VF 430
Query: 244 NKMALFGPS 252
NKM GPS
Sbjct: 431 NKMLKDGPS 439
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 115/219 (52%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD +Y LI +C++R+++KA+++ ++M + +P+ ++Y+++I GL G+ +A D+
Sbjct: 230 PDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDM 289
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L+EM E G P Y I + C R+ DA L+ M +KG SP+ TY +
Sbjct: 290 LEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFR 349
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ + + +Y +M+ G +PNT + L+ + + IAL++++ M G +
Sbjct: 350 AGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQT 409
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + L M + +A F +M++ G P+ V++ +
Sbjct: 410 YNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTL 448
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 98/214 (45%), Gaps = 39/214 (18%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G++P+ ++Y LI+ CK+ A+KI +M ++ P+ +YTS+I GL G+
Sbjct: 573 MTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGK 632
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A + + E GC P Y+ + C R +AS L++ M EKGLSP+ Y
Sbjct: 633 VDAA----ERLTENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIY-- 686
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
C LV CK KV+ AL+++N M KG
Sbjct: 687 --------------------------------CSLLVAHCKSL-KVDCALEIFNLMAVKG 713
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEK 214
F ++ + VL LC + + EA F +++K
Sbjct: 714 FQPHLFIYKVLICALCGVSRAEEALNIFQSLLKK 747
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 106/219 (48%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G P+ V+Y+ LI+ C + ++ +A ++E+M ++ I P V +YT I L +G+ D A
Sbjct: 262 GCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDA 321
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++++ M + GC P Y A I A ++ A G+ +M+++GL PN TYN
Sbjct: 322 INLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINE 381
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ ++ M G G L N Q+ ++K + +E A+ ++N M++ G
Sbjct: 382 LCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPT 441
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + L G L A + M E +P + ++
Sbjct: 442 VVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTY 480
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 97/219 (44%), Gaps = 4/219 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E +PD +Y LI +CK +++ A +M ISP+ +YT++I G G+
Sbjct: 468 MKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGK 527
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A + + M+E GC YNA I R +A +M E+GL PN TY
Sbjct: 528 IDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTS 587
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ ++ M CLPN + L+ ++ KV+ A +L + E
Sbjct: 588 LINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAERLTENGCEPT 647
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
+Y L LC G+ EA + M EKG PS
Sbjct: 648 IDTY----STLVSGLCREGRSNEASQLVENMKEKGLSPS 682
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 97/223 (43%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G++P + +Y I C +V+ A +V M + SP V +YT+II GL G+
Sbjct: 293 MTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGK 352
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A + +M + G P+ YNA I C R A + D M G NA TYN
Sbjct: 353 MELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQ 412
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + +D+ + ++ +M+ G P + L+ ++ + A + M E
Sbjct: 413 IIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESN 472
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
L C GKL A F EM++ G P+Q ++
Sbjct: 473 CEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTY 515
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ P+ V+YN LI+ C + + A KI + M + +Y II GL +
Sbjct: 363 MLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDD 422
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA V +M + G P YN I L +A+ + M E P+ TY
Sbjct: 423 IEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCE 482
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F L S+ + + M+ G PN + ++ ++ K+++AL L+ M E G
Sbjct: 483 LISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENG 542
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ I + + L + EAEK +M E+G +P+ +++ +
Sbjct: 543 CSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSL 588
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 105/255 (41%), Gaps = 6/255 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G P +V+YN LI K + A + + M++ + PD +Y +I G G+
Sbjct: 433 MLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGK 492
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A EM + G P+ Y A I YC ++ A L + M E G S + TYN
Sbjct: 493 LDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNA 552
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
N + +M G PNT + L+ + +A +++++M +K
Sbjct: 553 IISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKN 612
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
L LC GK+ AE+ + E G +P+ ++ + L EA
Sbjct: 613 CLPNAHTYTSLIYGLCQEGKVDAAER----LTENGCEPTIDTYSTLVSGLCREGRSNEAS 668
Query: 240 QNLSN-KMALFGPSM 253
Q + N K PSM
Sbjct: 669 QLVENMKEKGLSPSM 683
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 98/216 (45%), Gaps = 2/216 (0%)
Query: 47 SYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEM 106
S+ +++ LG A++V ++ G P +N I C ++++A + +++
Sbjct: 164 SFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKI 223
Query: 107 VEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKV 166
+ L P+A TY + L ++ ++ RM+ GC PN+ + L+ + ++
Sbjct: 224 FQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRI 283
Query: 167 EIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
A+ + +M EKG + V LCD+G++ +A M +KG PS ++ I
Sbjct: 284 GEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAI 343
Query: 227 KALMELANKQEALQNLSNKMALFGPSMIPKREEYLA 262
+ + A K E + +KM G ++P Y A
Sbjct: 344 ISGLFRAGKMELAIGMYHKMLKEG--LVPNTVTYNA 377
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 42/106 (39%), Gaps = 10/106 (9%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G +P + Y LI C + E+A I + + + + D+I +T ++ GL G D
Sbjct: 713 GFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDLC 772
Query: 65 RDVLKEMKEYGCYPDAAAY----------NAAIRNYCIAKRLRDAS 100
L M+ C P Y +I I RLR+ S
Sbjct: 773 MKFLYLMESRNCTPSLHTYIILARELSKVGKSIGTDQIGNRLREVS 818
>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
Length = 375
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 119/236 (50%), Gaps = 1/236 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD+++Y LI+ C + V +A K++++M PDV++Y ++ G+ G+ D+A
Sbjct: 14 PDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKF 73
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L M YG P+ +N +R+ C R DA L+ EMV KG SP+ T+N+
Sbjct: 74 LNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCR 133
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
L + ++ +M GC PN+ S L+ +++K++ A+Q MV +G I+
Sbjct: 134 KGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVT 193
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNL 242
+ + LC GK+ A + ++ KG P +++ I L ++ +A++ L
Sbjct: 194 YNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELL 249
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 117/251 (46%), Gaps = 2/251 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G KPD+V+YN L++ CK+ ++++A K + M P+VI++ I+ + G+
Sbjct: 42 MGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGR 101
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +L EM GC P +N I C L A ++++M G +PN+ +YN
Sbjct: 102 WMDAEKLLTEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNP 161
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEK 179
F + + M+ GC P+ + L LCK KV+ A++L N + K
Sbjct: 162 LLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCK-DGKVDAAVELLNQLSSK 220
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
G ++ + + D L +GK +A + EM KG KP +++ + A + K E
Sbjct: 221 GCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEA 280
Query: 240 QNLSNKMALFG 250
+ + FG
Sbjct: 281 IKFFHDVEGFG 291
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 117/247 (47%), Gaps = 7/247 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P +V++N LI+ C+ + +A I+EKM +P+ +SY ++ G +
Sbjct: 112 MVRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKK 171
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A L+ M GCYPD YN + C ++ A L++++ KG SP TYN
Sbjct: 172 MDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNT 231
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L M G G P+ + L+ R+ KVE A++ ++D+ +G
Sbjct: 232 VIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDV--EG 289
Query: 181 FG---SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQ 236
FG + + ++F L C + A MI KG KP++VS+ I+ + +
Sbjct: 290 FGVKPNAFTYNSIMFGL-CKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAK 348
Query: 237 EALQNLS 243
EAL+ L+
Sbjct: 349 EALELLN 355
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 91/180 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PDIV+YN ++ CKD +V+ A +++ ++ + SP +I+Y ++I GL VG+
Sbjct: 182 MVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGK 241
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A ++L EM+ G PD Y++ I ++ +A ++ G+ PNA TYN
Sbjct: 242 TDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNS 301
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + M+ GC P S L++ + + AL+L N++ +G
Sbjct: 302 IMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRG 361
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 110/226 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G +P+++++N ++ C + A K++ +M + SP V+++ +I L G
Sbjct: 77 MPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCRKGL 136
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A D+L++M +GC P++ +YN + +C K++ A ++ MV +G P+ TYN
Sbjct: 137 LGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNT 196
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ L ++ GC P + ++ + K + A++L ++M KG
Sbjct: 197 MLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKG 256
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ L L GK+ EA K F ++ G KP+ ++ I
Sbjct: 257 LKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSI 302
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 62/124 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G+KPD+++Y+ LI ++ +VE+A K + + P+ +Y SI+ GL Q
Sbjct: 252 MRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQ 311
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A D L M GC P +Y I ++A L++E+ +G+ ++ +
Sbjct: 312 TDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRGVVKKSSAEQV 371
Query: 121 FFRV 124
R+
Sbjct: 372 VVRL 375
>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 125/251 (49%), Gaps = 10/251 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ + + PDIVSYN +I+ CK++++EKA ++ +M P+ +Y ++ GL G+
Sbjct: 1 MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A +L EMK G D Y+ I +C L L DEM+EKG+SPN Y+
Sbjct: 61 VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSC 120
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPN--TQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
F R + + M G P+ T +CM + LCK + AL L++ M E
Sbjct: 121 LINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCM-IGGLCK-DGRARKALDLFDLMTE 178
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEA 238
KG + +VL + LC G + +A K F M+EKG + VS+ + +M L N +
Sbjct: 179 KGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTL--IMGLCNNGK- 235
Query: 239 LQNLSNKMALF 249
L M LF
Sbjct: 236 ---LDEAMKLF 243
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 114/222 (51%), Gaps = 2/222 (0%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
+P+ +Y L+D CK+ +VE+A +++ +M+ + + DV+ Y+++I G G D+ +
Sbjct: 42 EPNSFTYCILMDGLCKEGRVEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKA 101
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
+ EM E G P+ Y+ I +C R+A+ ++ M E+G+ P+ TY
Sbjct: 102 LFDEMLEKGISPNVVVYSCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLC 161
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
R + +L+ M G P+T + L+ ++ + A +++ M+EKG ++
Sbjct: 162 KDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVV 221
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGH--KPSQVSFRRI 226
+ L LC+ GKL EA K F ++E G+ +P ++F +
Sbjct: 222 SYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTV 263
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 110/245 (44%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
V+PD++++N +I CK+ +++KA +I + M + ++ + +IG G DKA
Sbjct: 253 VEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAM 312
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
++ K + + G P + Y+ I +C L A GL M GLSP YN
Sbjct: 313 ELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASL 372
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ L + L+ M + C P+T S ++ + + A +L NDM + G
Sbjct: 373 CKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDA 432
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNK 245
+ L +G++ EA+ +F MI G P + + L ++ E + NL +
Sbjct: 433 YTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQ 492
Query: 246 MALFG 250
MA G
Sbjct: 493 MADMG 497
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 95/197 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+ ++G+ P +Y+ +ID +CK + A + +M+ +SP + Y +++ L
Sbjct: 318 VHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESS 377
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++AR + +EMKE C PD ++N I A + A L+++M + GL+P+A TY+
Sbjct: 378 LEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSS 437
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + + + M+ +G P+ L+K +++E + L M + G
Sbjct: 438 FINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMG 497
Query: 181 FGSYILVSDVLFDLLCD 197
+ +++ + LC+
Sbjct: 498 VILDLEITNSILTFLCN 514
>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 588
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 114/226 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + +P++V ++ LID CKDRQV +A+ I +M + ISP++++Y S+I GL + +
Sbjct: 201 MEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCE 260
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++ EM + PD N + C + +A ++D M+ +G+ PN TYN
Sbjct: 261 WKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNA 320
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
N++ + ++ M+ C+ N S L+ + + V+ A+ L+ +M +
Sbjct: 321 LMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQE 380
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + L LC +G+L +A F EM+ +G P V++R +
Sbjct: 381 LTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTL 426
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 109/226 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV+P++V+YN L+D +C +V+ A K+ + M +D +VISY ++I G +
Sbjct: 306 MIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQS 365
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA + +EM P+ YN I C RL+DA L EMV +G P+ TY
Sbjct: 366 VDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRT 425
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L + L + G+ P+ Q ++ R ++E A L++++ KG
Sbjct: 426 LSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKG 485
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ +++ LC G L EA K F EM + G P+ ++ I
Sbjct: 486 LQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLI 531
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 79/159 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD+V+Y L D CK+R ++KA +++ + + PD+ YT+I+ G+ G+
Sbjct: 411 MVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGE 470
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ ARD+ + G P+ YN I C L +AS L EM + G SPN TYNL
Sbjct: 471 LEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNL 530
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKL 159
R F +N+ + L M+ G + + LV +
Sbjct: 531 ITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGM 569
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 103/229 (44%), Gaps = 38/229 (16%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
++G +PD ++ LI C + ++ +A + +KM E P+V++Y ++I GL VG
Sbjct: 133 KLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTS 192
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
A +L+ M++ C P+ ++ I + C +++ +A + EM+ KG+SPN TYN
Sbjct: 193 AAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLI 252
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
L KLC+ + L N+MV+
Sbjct: 253 H-------------------------------GLCKLCEWKH----VTTLMNEMVDSKIM 277
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALME 231
+ + + D LC G + EA MI +G +P+ V++ ALM+
Sbjct: 278 PDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTY---NALMD 323
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 96/226 (42%), Gaps = 35/226 (15%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVG--------- 59
+++SYN LI+ YCK + V+KA + E+M ++++P+ ++Y ++I GL VG
Sbjct: 349 NVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLF 408
Query: 60 --------------------------QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIA 93
DKA +LK ++ PD Y + C A
Sbjct: 409 HEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRA 468
Query: 94 KRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSC 153
L DA L + KGL PN TYN+ L + L+ M GC PN +
Sbjct: 469 GELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTY 528
Query: 154 MFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMG 199
+ + R + ++L +M+ +GF + + +L +L D G
Sbjct: 529 NLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDG 574
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 91/220 (41%), Gaps = 2/220 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P V +N L+ K + + +M I PDV + +I L + + D A
Sbjct: 68 PSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSA 127
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L ++ + G PDA + IR C+ ++ +A L D+M+ +G PN TY
Sbjct: 128 LAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCK 187
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+ ++ L M C PN L+ LCK ++ E A ++++M+ KG I+
Sbjct: 188 VGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTE-AFNIFSEMITKGISPNIV 246
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ L LC + + EM++ P + +
Sbjct: 247 TYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTV 286
>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 528
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 114/236 (48%), Gaps = 3/236 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G +P +V+YN L+D C +V A K+ KM + SPD +Y++++ GLG G+
Sbjct: 196 MKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGR 255
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A V +EM + G D YN+ + A + LM EM KG P+A ++N
Sbjct: 256 VEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNT 315
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+N ++ ++ RM+ +GC P+ S L+ R A Q+ +MVE G
Sbjct: 316 IMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAG 375
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQ 236
F + L L G++ EA EM G +P V++ R LM++ K+
Sbjct: 376 FIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNR---LMDMLGKR 428
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 118/252 (46%), Gaps = 2/252 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G + D +YN LI + + Q++ A ++ +M+ + PD +Y ++ LG G+ +A
Sbjct: 95 GCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEA 154
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
R M E G P+ YN + + +L A GL EM +G P+ TYN+
Sbjct: 155 RSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDA 214
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + ++ L+ +M G GC P++ + LV + +VE A +++ +MV++G
Sbjct: 215 LCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVD 274
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSN 244
++ + L L G + K EM KG P SF I + ANK +A + +
Sbjct: 275 LVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFA 334
Query: 245 KMALFG--PSMI 254
+M G P +I
Sbjct: 335 RMVESGCKPDLI 346
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 101/211 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV D+V+YN L+ K +++ +K++++M + PD S+ +I+ LG +
Sbjct: 266 MVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANK 325
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
PD AR+V M E GC PD +YN I +Y A +++EMVE G P TYN
Sbjct: 326 PDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNS 385
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ + M GC P+ + L+ + ++ + + A +L+ M +KG
Sbjct: 386 LIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKG 445
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEM 211
L V D L +L EA F +M
Sbjct: 446 VEPDTLSYAVRIDGLAFDDRLDEALVLFKDM 476
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 104/223 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+ P+I +YN L+D + K Q++ A + +M+ P V++Y ++ L G+
Sbjct: 161 MLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGR 220
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
AR + +M GC PD+ Y+ + + R+ +A + EMV++G++ + YN
Sbjct: 221 VGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNS 280
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ W L M G P+ S ++ + K + A +++ MVE G
Sbjct: 281 LLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESG 340
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ ++L D G +A + EM+E G P ++
Sbjct: 341 CKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTY 383
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 110/226 (48%), Gaps = 1/226 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PD +Y+ L++ K +VE+A+K+ +M D ++ D+++Y S++ L G D+
Sbjct: 235 GCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRV 294
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++KEM G +PDA ++N + A + A + MVE G P+ +YN+
Sbjct: 295 WKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDS 354
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ D + + M+ G +P T++ L+ +V+ A + +M G
Sbjct: 355 YARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPD 414
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKAL 229
++ + L D+L G+ A + F +M +KG +P +S+ RI L
Sbjct: 415 VVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGL 460
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 86/175 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G KPD++SYN LID Y + +A +++E+M + P+ +Y S+I L GQ
Sbjct: 336 MVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQ 395
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A VL+EM+ GC PD YN + + A+ L +M +KG+ P+ +Y +
Sbjct: 396 VDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAV 455
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWND 175
+ + L + L+ M GC + L++ R E+ QL ++
Sbjct: 456 RIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILIRAAHRAGDTELEAQLKHE 510
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 99/208 (47%)
Query: 16 LIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYG 75
LI Y + + A+ + + SP V ++T +I L G+ ++A V K++ + G
Sbjct: 36 LITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKG 95
Query: 76 CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSW 135
C D AYN IR + + +L A + EM KG P+ TY + ++ +
Sbjct: 96 CQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEAR 155
Query: 136 NLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLL 195
+ + M+ G PN + L+ ++ ++++AL L+ +M +GF ++ ++L D L
Sbjct: 156 SFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDAL 215
Query: 196 CDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
C G++ A K F +M G P ++
Sbjct: 216 CSAGRVGAARKLFHKMTGDGCSPDSYTY 243
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 88/200 (44%)
Query: 47 SYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEM 106
+ +I G + A D+ + + + C P A+ I + A + ++
Sbjct: 32 TLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAELVYKKL 91
Query: 107 VEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKV 166
V+KG + YN+ R F S L S+ ++ M G P+ + FLV + +V
Sbjct: 92 VQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRV 151
Query: 167 EIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ A ++ M+E+G I ++L D +G+L A F EM +G +PS V++ +
Sbjct: 152 QEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNIL 211
Query: 227 KALMELANKQEALQNLSNKM 246
+ A + A + L +KM
Sbjct: 212 LDALCSAGRVGAARKLFHKM 231
>gi|359497434|ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 347
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 125/251 (49%), Gaps = 2/251 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G +P++++Y LID +CK+ ++E+A ++++M + ++ + + Y +I L +
Sbjct: 40 MQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEK 99
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A ++ +M GC PD +N+ I C + +A GL +M+ +G+ N TYN
Sbjct: 100 VQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNT 159
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F ++ + L M+ GC + + L+K R +E L L+ DM+ KG
Sbjct: 160 LIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKG 219
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
+ ++L + LC G + A + +MI +G P V++ I L + QEAL
Sbjct: 220 LNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEAL 279
Query: 240 QNLSNKMALFG 250
NL +K+ + G
Sbjct: 280 -NLFDKLQVEG 289
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 118/243 (48%), Gaps = 1/243 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G PDI +YN LI CK + A +++ +M+ + P+VI+YT +I G+
Sbjct: 5 MLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGR 64
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++AR+VL EM G +A YN I C ++++DA + +M KG P+ T+N
Sbjct: 65 LEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNS 124
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
N + LY M+ G + NT + L+ R+ ++ AL+L NDM+ +G
Sbjct: 125 LIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRG 184
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEAL 239
+ + L LC G + + F +M+ KG P+ +S I L N Q AL
Sbjct: 185 CPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHAL 244
Query: 240 QNL 242
+ L
Sbjct: 245 EFL 247
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 108/226 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ + V YNCLI CKD +V+ A + M + PD+ ++ S+I GL V +
Sbjct: 75 MSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNK 134
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A + ++M G + YN I + +++A L+++M+ +G + TYN
Sbjct: 135 FEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNG 194
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + ++ L+ MM G PN SC L+ R ++ AL+ DM+ +G
Sbjct: 195 LIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRG 254
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
I+ + L + LC G+ EA F ++ +G P +++ +
Sbjct: 255 LTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTL 300
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 102/216 (47%), Gaps = 3/216 (1%)
Query: 34 EKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIA 93
E M PD+ +Y ++I GL G AR+++ EM+ GC P+ Y I +C
Sbjct: 3 ESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKE 62
Query: 94 KRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSC 153
RL +A ++DEM KGL+ NA YN ++ + N++ M GC P+ +
Sbjct: 63 GRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTF 122
Query: 154 MFLV-KLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMI 212
L+ LCK K E AL L+ DM+ +G + + + L G + EA K +M+
Sbjct: 123 NSLIFGLCKVN-KFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDML 181
Query: 213 EKGHKPSQVSFRR-IKALMELANKQEALQNLSNKMA 247
+G +++ IKAL N ++ L + M+
Sbjct: 182 FRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMS 217
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 101/224 (45%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G KPDI ++N LI CK + E+A + + M E + + I+Y ++I G
Sbjct: 110 MSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGA 169
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++ +M GC D YN I+ C A + L ++M+ KGL+PN + N+
Sbjct: 170 MQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNI 229
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+ +++ + M+ G P+ + L+ LCK E AL L++ + +
Sbjct: 230 LINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQE-ALNLFDKLQVE 288
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G + + L C G +A ++ G P++V++
Sbjct: 289 GICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTW 332
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 64/130 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ P+ +S N LI+ C+ ++ A + + M ++PD+++Y S+I GL G+
Sbjct: 215 MMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGR 274
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++ +++ G PDA YN I +C DA L+ V+ G PN T+ +
Sbjct: 275 AQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYI 334
Query: 121 FFRVFYWSND 130
F D
Sbjct: 335 LVSNFIKEGD 344
Score = 44.3 bits (103), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 61/149 (40%)
Query: 102 LMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCK 161
+ + M+ G P+ TYN L S+ L M GC PN + L+
Sbjct: 1 MHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFC 60
Query: 162 RQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQV 221
++ ++E A + ++M KG + + L LC K+ +A F +M KG KP
Sbjct: 61 KEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIF 120
Query: 222 SFRRIKALMELANKQEALQNLSNKMALFG 250
+F + + NK E L M L G
Sbjct: 121 TFNSLIFGLCKVNKFEEALGLYQDMLLEG 149
>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
Length = 850
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 116/223 (52%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E GV PD+V+YN LI+ YC+ +E+A+++++ M + + P V +Y +II GL G+
Sbjct: 384 MEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGK 443
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A+ VL EM + G PD A YN + C + DA + DEM +G+ P+ +++
Sbjct: 444 YLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSA 503
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + L + + M G P+ L+ R + AL++ ++M+E+G
Sbjct: 504 LIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQG 563
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + + + LC L EA++ F EM E+G P +F
Sbjct: 564 CXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTF 606
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 122/248 (49%), Gaps = 3/248 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV PD+VS++ LI + K+ +++A K M++ ++PD + YT +IGG G
Sbjct: 489 MPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGV 548
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A V EM E GC D YN + C K L +A L EM E+G+ P+ T+
Sbjct: 549 MSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTT 608
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+ ++ + L+ M+ P+ + L+ CK E +E +LWNDM+ +
Sbjct: 609 LINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSE-MEKVNELWNDMISR 667
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI-KALMELANKQEA 238
+ +L + C+MG + EA + + EM+EKG + + ++ I K N +A
Sbjct: 668 RIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKA 727
Query: 239 LQNLSNKM 246
+ LSN +
Sbjct: 728 DEFLSNML 735
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 117/247 (47%), Gaps = 2/247 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G+ PD V Y LI +C++ + +A K+ ++M ++ DV++Y +I+ GL
Sbjct: 524 MKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKM 583
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++ EM E G +PD + I Y + A L + M+++ L P+ TYN
Sbjct: 584 LSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNT 643
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F +++ L+ M+ PN S L+ V A +LW++MVEKG
Sbjct: 644 LIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKG 703
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
F + I+ + + C G V+A++ M+ KG P +++ I ++ N A
Sbjct: 704 FEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAF 763
Query: 240 QNLSNKM 246
L NKM
Sbjct: 764 A-LVNKM 769
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 114/241 (47%), Gaps = 1/241 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E GV PD ++ LI+ Y KD + KA + E M ++ PDV++Y ++I G +
Sbjct: 594 MTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSE 653
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+K ++ +M YP+ +Y I YC + +A L DEMVEKG T N
Sbjct: 654 MEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNT 713
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + + + M+ G +P+ + L+ ++E ++ A L N M G
Sbjct: 714 IVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSG 773
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
++ +V+ + G++ EAE L+MIE+G P + ++ I + N +EA
Sbjct: 774 LLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAF 833
Query: 240 Q 240
+
Sbjct: 834 R 834
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 111/222 (50%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV+ ++ + N +I+ CK++++E + M ++ + PDV++Y ++I G ++A
Sbjct: 353 GVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEA 412
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+++ M G P YNA I C + A G++DEM++ G+SP+ TYN+
Sbjct: 413 FELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVE 472
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
++++ + ++ M G +P+ S L+ L + ++ AL+ + DM G
Sbjct: 473 CCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPD 532
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ +L C G + EA K EM+E+G V++ I
Sbjct: 533 NVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTI 574
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 65/110 (59%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ PD ++YN LI+ + K+ +++A+ +V KM + + PDVI+Y I+ G G+ +A
Sbjct: 738 GIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEA 797
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPN 114
++ +M E G PD + Y + I + L++A + DEM+++G P+
Sbjct: 798 ELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 847
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 78/149 (52%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G + I++ N ++ YC+ KA + + M + I PD I+Y ++I G
Sbjct: 699 MVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEEN 758
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A ++ +M+ G PD YN + + R+++A +M +M+E+G++P+ +TY
Sbjct: 759 MDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTS 818
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPN 149
N+L+ ++ ++ M+ G +P+
Sbjct: 819 LINGHVTQNNLKEAFRVHDEMLQRGFVPD 847
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 86/176 (48%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ P+ +SY LI+ YC V +A+++ ++M ++ +I+ +I+ G G KA
Sbjct: 669 IYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKAD 728
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+ L M G PD YN I + + + A L+++M GL P+ TYN+ F
Sbjct: 729 EFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGF 788
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
++ + + +M+ G P+ + L+ Q ++ A ++ ++M+++GF
Sbjct: 789 SRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGF 844
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 99/223 (44%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
++ G+ I + N L+ K V+ A++I +++ + +V + +I L +
Sbjct: 314 LKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQK 373
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ + L +M+E G +PD YN I YC L +A LMD M KGL P TYN
Sbjct: 374 IENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNA 433
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + M+ G P+T + L+ C R + + A +++++M +G
Sbjct: 434 IINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQG 493
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ L LL G L +A K F +M G P V +
Sbjct: 494 VVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIY 536
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 101/223 (45%), Gaps = 10/223 (4%)
Query: 13 YNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMK 72
++ L+ Y + R++ + + ++ + + + + S++GGL VG D A ++ +E+
Sbjct: 291 FDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVV 350
Query: 73 EYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLR 132
G + N I C +++ + + +M EKG+ P+ TYN + L
Sbjct: 351 RSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLE 410
Query: 133 SSWNLYCRMMGTGCLPNTQSCMF-----LVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
++ L M G G P C+F + LCK + + A + ++M++ G
Sbjct: 411 EAFELMDSMSGKGLKP----CVFTYNAIINGLCKTGKYLR-AKGVLDEMLKIGMSPDTAT 465
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALM 230
++L C +++AE+ F EM +G P VSF + L+
Sbjct: 466 YNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLL 508
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 90/222 (40%), Gaps = 22/222 (9%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
K + S++ +I + + R++ A ++ +M + +S I+ L L
Sbjct: 233 KHSLQSFSAMIHILVRSRRLPDAQAVILRM----VRKSGVSRVEIVESLVLT-------- 280
Query: 67 VLKEMKEYG-CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
YG C + ++ +R Y A++LR+ + KGL + N
Sbjct: 281 -------YGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGL 333
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSY 184
+ +W +Y ++ +G N + ++ LCK Q K+E +DM EKG
Sbjct: 334 VKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQ-KIENTKSFLSDMEEKGVFPD 392
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ + L + C G L EA + M KG KP ++ I
Sbjct: 393 VVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAI 434
>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 859
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 112/226 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV+PD+V+YN ++D CK R ++KA ++ +M D+ + PD ++YT+II G G
Sbjct: 290 MVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGH 349
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++ + ++M G P +N+ + + C R +DA + M KG P+ +Y++
Sbjct: 350 WKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSI 409
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ NL+ M G + N L+ ++ ++ A+ ++ +M +G
Sbjct: 410 LLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQG 469
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ L C MG+L +A + F +MI G +P+ V + +
Sbjct: 470 VRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSL 515
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 107/218 (49%), Gaps = 4/218 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDED--ISPDVISYTSIIGGLGLV 58
M ++G P+ +SYN +I C D + ++A +V++M E SPDV+S+ ++I G
Sbjct: 218 MSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQ 277
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
G+ KA +++ EM + G PD YN+ + C A+ + A ++ +MV+KG+ P+ TY
Sbjct: 278 GEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTY 337
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSC-MFLVKLCKRQEKVEIALQLWNDMV 177
+ S + S ++ +M G +P + F+ LCK + A +++ M
Sbjct: 338 TAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKD-AEEIFQYMT 396
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
KG ++ +L G+ + F M +KG
Sbjct: 397 TKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKG 434
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 113/242 (46%), Gaps = 1/242 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD+VS+N +I + K +V KA ++ +M + + PDV++Y SI+ L DKA V
Sbjct: 262 PDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELV 321
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L++M + G PD Y A I Y + ++++ + +M KGL P T+N F
Sbjct: 322 LRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCK 381
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ + ++ M G +P+ S L+ + + L++ M +KG +
Sbjct: 382 HGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHC 441
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLSNKM 246
++L G + EA F EM +G +P V++ I A + +A++ S +
Sbjct: 442 FNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMI 501
Query: 247 AL 248
++
Sbjct: 502 SI 503
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 103/227 (45%), Gaps = 1/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV+PD ++Y +I Y +++ K+ KM + + P ++++ S + L G+
Sbjct: 325 MVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGR 384
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A ++ + M G PD +Y+ + Y R D + L M +KG+ N +N+
Sbjct: 385 SKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNI 444
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + ++ M G G P+ + L+ R ++ A++ ++ M+ G
Sbjct: 445 LISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIG 504
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG-HKPSQVSFRRI 226
+V L C G LV+A++ EM+ KG +P+ V F I
Sbjct: 505 LEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSI 551
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 108/233 (46%), Gaps = 1/233 (0%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
+P+IV ++ +I C + +V A+ + + P ++++ S+I G LVG+ +KA
Sbjct: 542 RPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFG 601
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
VL M G PD YN + YC + ++ D L EM+ K + P TY++ +
Sbjct: 602 VLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLF 661
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+ ++ ++ M+ +G + + L+K R + + A+ L++ + I
Sbjct: 662 HAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDIT 721
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEA 238
+ + + + L + + EA F + G P+ ++ I L++ + +EA
Sbjct: 722 ILNTVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEA 774
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 113/247 (45%), Gaps = 1/247 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ + +N LI + K +++A + +M+ + + PDV++Y+++I +G+
Sbjct: 430 MADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGR 489
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLS-PNATTYN 119
A + +M G P+ Y++ I +C+ L A L+ EM+ KG+ PN ++
Sbjct: 490 LADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFS 549
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ + +++ ++ G P + L+ K+E A + + MV
Sbjct: 550 SIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSV 609
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
G ++ + L C GK+ + F EM+ K KP+ V++ + + A + A
Sbjct: 610 GIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAA 669
Query: 240 QNLSNKM 246
+ + ++M
Sbjct: 670 KKMFHEM 676
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 95/218 (43%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
+G +P IV++N LID YC ++EKA+ +++ M I PDV++Y +++ G G+ D
Sbjct: 573 HIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKID 632
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
+ +EM P Y+ + A R A + EM++ G + + TY +
Sbjct: 633 DGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILL 692
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
+ ++ + L+ ++ C + ++ + + E A L+ + G
Sbjct: 693 KGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEANDLFAAISTSGLV 752
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQ 220
+ V+ L G + EA+ F M + G PS
Sbjct: 753 PNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSS 790
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 113/276 (40%), Gaps = 38/276 (13%)
Query: 10 IVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL- 68
+ +Y L+D C+ R+ + ++ + I + + L + D+A DVL
Sbjct: 156 VHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTFLKCLCHAKRTDEAVDVLL 215
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKG--LSPNATTYNLFFRVFY 126
M + GC P+A +YN I++ C R ++A ++ M ++G SP+ ++N F+
Sbjct: 216 HRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFF 275
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQ--EKVEIAL------------- 170
++ + NL M+ G P+ + +V LCK + +K E+ L
Sbjct: 276 KQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGL 335
Query: 171 -------------------QLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEM 211
+++ M KG I+ + LC G+ +AE+ F M
Sbjct: 336 TYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYM 395
Query: 212 IEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMA 247
KGH P VS+ + + + NL + MA
Sbjct: 396 TTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMA 431
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 95/205 (46%), Gaps = 2/205 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G++PD+V+YN L+ YCK +++ + +M + + P ++Y+ ++ GL G+
Sbjct: 606 MVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGR 665
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A+ + EM + G D Y ++ C +A L ++ + T N
Sbjct: 666 TSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNT 725
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
Y + +L+ + +G +PN + ++ ++ VE A +++ M + G
Sbjct: 726 VINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSG 785
Query: 181 FG-SYILVSDVLFDLLCDMGKLVEA 204
S L++D++ +L G +V+A
Sbjct: 786 CAPSSRLLNDII-RMLLQKGDIVKA 809
>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 744
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 128/271 (47%), Gaps = 2/271 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV+PD+V+Y L+D +C ++++A K+ + M + +PDVISYT++I G + +
Sbjct: 292 MIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHK 351
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA + +EM PD YN + C RL+DA L EMV +G P+ TY++
Sbjct: 352 IDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSI 411
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L + L + + P+ Q ++ R ++E A L++++ KG
Sbjct: 412 LLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKG 471
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI-KALMELANKQEAL 239
+ +++ LC G L EA K F+EM P ++ I + ++ A+
Sbjct: 472 LHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAI 531
Query: 240 QNLSNKMALFGPSMIPKREEYLAEMSASDSF 270
Q L +A G S L EM + D
Sbjct: 532 QLLEEMLAR-GFSADVSTTTLLVEMLSDDGL 561
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 111/223 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + +PD+V Y +ID CKDRQV +A+ + +M + ISPD+ +YTS++ L + +
Sbjct: 187 MEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCE 246
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+L +M PD ++ + C ++ +A ++D M+++G+ P+ TY
Sbjct: 247 WKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTT 306
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+++ + ++ M+ G P+ S L+ + K++ A+ L+ +M K
Sbjct: 307 LMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKE 366
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + L LC +G+L +A F EM+ +G P V++
Sbjct: 367 WIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTY 409
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 112/224 (50%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
++G +PD ++ LI C + ++ +A + +KM DE P+V++Y ++I GL VG
Sbjct: 119 KLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTS 178
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
A +L+ M++ C PD Y + I + C +++ +A L +MV +G+SP+ TY
Sbjct: 179 AAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLV 238
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
+ + L +M+ + LP+ +V ++ KV A ++ + M+++G
Sbjct: 239 HALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVE 298
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ L D C ++ EA K F M+ KG P +S+ +
Sbjct: 299 PDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTL 342
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 113/237 (47%), Gaps = 8/237 (3%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ PD+V ++ ++D CK+ +V +A++IV+ M + PDV++YT+++ G L + D+A
Sbjct: 262 ILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAV 321
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
V M G PD +Y I YC ++ A L +EM K P+ TYN
Sbjct: 322 KVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGL 381
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
L+ + L+ M+ G +P+ + + L LCK +E A+ L +
Sbjct: 382 CHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCH-LEEAMALLKAIEASNLNPD 440
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI------KALMELANK 235
I V +++ D +C G+L A F + KG PS ++ + + L+ ANK
Sbjct: 441 IQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANK 497
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 102/227 (44%), Gaps = 2/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV P++ + N LI+ +C +V A+ ++ K+ PD ++T++I GL + G+
Sbjct: 82 MDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGK 141
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + +M + G P+ Y I C A L+ M + P+ Y
Sbjct: 142 IGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTS 201
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+ ++NL+ +M+G G P+ + LV LC E + L N MV
Sbjct: 202 IIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVT-TLLNQMVNS 260
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+++ + D LC GK+ EA + MI++G +P V++ +
Sbjct: 261 KILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTL 307
>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
Length = 653
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 114/226 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + +P++V ++ LID CKDRQV +A+ I +M + ISP++++Y S+I GL + +
Sbjct: 201 MEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCE 260
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++ EM + PD N + C + +A ++D M+ +G+ PN TYN
Sbjct: 261 WKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNA 320
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
N++ + ++ M+ C+ N S L+ + + V+ A+ L+ +M +
Sbjct: 321 LMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQE 380
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + L LC +G+L +A F EM+ +G P V++R +
Sbjct: 381 LTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTL 426
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 109/226 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV+P++V+YN L+D +C +V+ A K+ + M +D +VISY ++I G +
Sbjct: 306 MIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQS 365
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA + +EM P+ YN I C RL+DA L EMV +G P+ TY
Sbjct: 366 VDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRT 425
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L + L + G+ P+ Q ++ R ++E A L++++ KG
Sbjct: 426 LSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKG 485
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ +++ LC G L EA K F EM + G P+ ++ I
Sbjct: 486 LQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLI 531
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 79/159 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD+V+Y L D CK+R ++KA +++ + + PD+ YT+I+ G+ G+
Sbjct: 411 MVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGE 470
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ ARD+ + G P+ YN I C L +AS L EM + G SPN TYNL
Sbjct: 471 LEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNL 530
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKL 159
R F +N+ + L M+ G + + LV +
Sbjct: 531 ITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGM 569
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 103/229 (44%), Gaps = 38/229 (16%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
++G +PD ++ LI C + ++ +A + +KM E P+V++Y ++I GL VG
Sbjct: 133 KLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTS 192
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
A +L+ M++ C P+ ++ I + C +++ +A + EM+ KG+SPN TYN
Sbjct: 193 AAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLI 252
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
L KLC+ + L N+MV+
Sbjct: 253 H-------------------------------GLCKLCEWKH----VTTLMNEMVDSKIM 277
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALME 231
+ + + D LC G + EA MI +G +P+ V++ ALM+
Sbjct: 278 PDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTY---NALMD 323
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 96/226 (42%), Gaps = 35/226 (15%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVG--------- 59
+++SYN LI+ YCK + V+KA + E+M ++++P+ ++Y ++I GL VG
Sbjct: 349 NVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLF 408
Query: 60 --------------------------QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIA 93
DKA +LK ++ PD Y + C A
Sbjct: 409 HEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRA 468
Query: 94 KRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSC 153
L DA L + KGL PN TYN+ L + L+ M GC PN +
Sbjct: 469 GELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTY 528
Query: 154 MFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMG 199
+ + R + ++L +M+ +GF + + +L +L D G
Sbjct: 529 NLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDG 574
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 91/220 (41%), Gaps = 2/220 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P V +N L+ K + + +M I PDV + +I L + + D A
Sbjct: 68 PSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSA 127
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L ++ + G PDA + IR C+ ++ +A L D+M+ +G PN TY
Sbjct: 128 LAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCK 187
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+ ++ L M C PN L+ LCK ++ E A ++++M+ KG I+
Sbjct: 188 VGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTE-AFNIFSEMITKGISPNIV 246
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ L LC + + EM++ P + +
Sbjct: 247 TYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTV 286
>gi|224107985|ref|XP_002314678.1| predicted protein [Populus trichocarpa]
gi|222863718|gb|EEF00849.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 125/246 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G PD+VSY+C I YC+ + + ++M+++ P+VI+YT+++ LG Q
Sbjct: 252 MEKHGFHPDVVSYSCFIAAYCEQKDFRNVEAVFDEMQEKGCKPNVITYTTVMHALGKARQ 311
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A +V ++MK GC PD+ Y++ I + R++DA + ++M ++G+ N YN
Sbjct: 312 LNEALEVYEKMKRNGCLPDSKFYSSLIYVLSQSGRIKDAWDVFEDMEKQGVCRNLWVYNT 371
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ S+ L RM G C P+ ++ L+K+C R++ +++ L + M +
Sbjct: 372 MISSACAHSQGGSALKLLERMEGDSCKPDVKTYAPLLKMCCRRKSIKLLKFLLSHMFKNN 431
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ +L + C GKL A F E + KG P +F+ + +E N +E +
Sbjct: 432 VSVDLGTYTLLVNEFCRNGKLEHACFYFQEAVLKGMVPMVKTFKALVEELEQKNMKEMKE 491
Query: 241 NLSNKM 246
+ M
Sbjct: 492 KIEKLM 497
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 92/192 (47%), Gaps = 1/192 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G D + N L+D K+ VE A+ + +D I+ D S+ +I G A
Sbjct: 187 GASKDREALNVLMDALVKEGDVEDAHSAFLEFKD-CITLDSSSFNILIHGYCKARMFVVA 245
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
R +++EM+++G +PD +Y+ I YC K R+ + DEM EKG PN TY
Sbjct: 246 RKIMEEMEKHGFHPDVVSYSCFIAAYCEQKDFRNVEAVFDEMQEKGCKPNVITYTTVMHA 305
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ L + +Y +M GCLP+++ L+ + + +++ A ++ DM ++G
Sbjct: 306 LGKARQLNEALEVYEKMKRNGCLPDSKFYSSLIYVLSQSGRIKDAWDVFEDMEKQGVCRN 365
Query: 185 ILVSDVLFDLLC 196
+ V + + C
Sbjct: 366 LWVYNTMISSAC 377
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 40/200 (20%), Positives = 83/200 (41%), Gaps = 4/200 (2%)
Query: 42 SPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASG 101
+P++ Y +I LG + ++++MK Y A + +R A++ +DA
Sbjct: 121 TPELYDY--MIDILGKFKKFSLMWSLVEQMKGLNGYVSLATASKVMRRLAKARKYKDAID 178
Query: 102 LMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCK 161
+ + + G S + N+ D+ + + + L ++ + + CK
Sbjct: 179 VFRGIEKYGASKDREALNVLMDALVKEGDVEDAHSAFLEFKDCITLDSSSFNILIHGYCK 238
Query: 162 RQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQV 221
+ V +A ++ +M + GF ++ C+ E F EM EKG KP+ +
Sbjct: 239 ARMFV-VARKIMEEMEKHGFHPDVVSYSCFIAAYCEQKDFRNVEAVFDEMQEKGCKPNVI 297
Query: 222 SFRRI-KALMELANKQEALQ 240
++ + AL + EAL+
Sbjct: 298 TYTTVMHALGKARQLNEALE 317
>gi|356533985|ref|XP_003535538.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like, partial [Glycine max]
Length = 594
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 132/267 (49%), Gaps = 2/267 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+KPDI + N ++ C +++ E+AY++ K R D ++Y ++I G Q
Sbjct: 269 MARKGLKPDICTLNTMLHTLCMEKKPEEAYELTVKARKRGYILDEVTYGTLIMGYFKGKQ 328
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA + +EMK+ G P +YN IR C++ + A ++E++EKGL P+ + N+
Sbjct: 329 EDKALKLWEEMKKRGIVPSVVSYNPLIRGLCLSGKTDQAVDKLNELLEKGLVPDEVSCNI 388
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ W + ++ + +M+G P+ + L++ R + +E A +L+N + K
Sbjct: 389 IIHGYCWEGMVDKAFQFHNKMVGNSFKPDIFTRNILLRGLCRVDMLEKAFKLFNSWISKQ 448
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
++ + + LC G+L EA +M K +P Q ++ I + A + E +
Sbjct: 449 NSVDVVTYNTMISYLCKEGRLDEAFDLMTDMEVKKFEPDQYTYNAIVRALTHAGRTEEAE 508
Query: 241 NLSNKMALFGPSMIPKREEYLAEMSAS 267
+K++ G ++ K + E+ AS
Sbjct: 509 KFMSKLSETGQAV--KTHDTSQELDAS 533
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 112/223 (50%), Gaps = 1/223 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDE-DISPDVISYTSIIGGLGLVG 59
M + + PD+V+YN LID K R + ++++E+M+ + P+ +++ ++ G G
Sbjct: 163 MESLKLIPDVVTYNTLIDGCFKWRGSTEGFRLLEEMKSRGGVEPNAVTHNIMVKWFGKEG 222
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ ++A D + +M E G PD YN I +C A +L +A +MDEM KGL P+ T N
Sbjct: 223 KINEASDAVVKMVESGVSPDCFTYNTMINGFCKAGKLGEAFRMMDEMARKGLKPDICTLN 282
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
++ L + G + + + L+ + ++ + AL+LW +M ++
Sbjct: 283 TMLHTLCMEKKPEEAYELTVKARKRGYILDEVTYGTLIMGYFKGKQEDKALKLWEEMKKR 342
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
G ++ + L LC GK +A E++EKG P +VS
Sbjct: 343 GIVPSVVSYNPLIRGLCLSGKTDQAVDKLNELLEKGLVPDEVS 385
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 105/254 (41%), Gaps = 35/254 (13%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV+P+ V++N ++ + K+ ++ +A V KM + +SPD +Y ++I G G+ +A
Sbjct: 203 GVEPNAVTHNIMVKWFGKEGKINEASDAVVKMVESGVSPDCFTYNTMINGFCKAGKLGEA 262
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLM--------------------- 103
++ EM G PD N + C+ K+ +A L
Sbjct: 263 FRMMDEMARKGLKPDICTLNTMLHTLCMEKKPEEAYELTVKARKRGYILDEVTYGTLIMG 322
Query: 104 --------------DEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPN 149
+EM ++G+ P+ +YN R S + + ++ G +P+
Sbjct: 323 YFKGKQEDKALKLWEEMKKRGIVPSVVSYNPLIRGLCLSGKTDQAVDKLNELLEKGLVPD 382
Query: 150 TQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFL 209
SC ++ + V+ A Q N MV F I ++L LC + L +A K F
Sbjct: 383 EVSCNIIIHGYCWEGMVDKAFQFHNKMVGNSFKPDIFTRNILLRGLCRVDMLEKAFKLFN 442
Query: 210 EMIEKGHKPSQVSF 223
I K + V++
Sbjct: 443 SWISKQNSVDVVTY 456
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 102/261 (39%), Gaps = 47/261 (18%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
R+ G D V+Y LI Y K +Q +KA K+ E+M+ I P V+SY +I GL L G+
Sbjct: 305 RKRGYILDEVTYGTLIMGYFKGKQEDKALKLWEEMKKRGIVPSVVSYNPLIRGLCLSGKT 364
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
D+A D L E+ E G PD + N I YC + A ++MV P+ T N+
Sbjct: 365 DQAVDKLNELLEKGLVPDEVSCNIIIHGYCWEGMVDKAFQFHNKMVGNSFKPDIFTRNIL 424
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
R + L ++ L+ + + + ++ ++ +++ A L DM K F
Sbjct: 425 LRGLCRVDMLEKAFKLFNSWISKQNSVDVVTYNTMISYLCKEGRLDEAFDLMTDMEVKKF 484
Query: 182 ---------------------------------GSYILVSDVLFDL-------------- 194
G + D +L
Sbjct: 485 EPDQYTYNAIVRALTHAGRTEEAEKFMSKLSETGQAVKTHDTSQELDASSDIMYSQQISD 544
Query: 195 LCDMGKLVEAEKSFLEMIEKG 215
LC GK EA K F E +KG
Sbjct: 545 LCTQGKYKEAMKLFQESEQKG 565
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 86/183 (46%), Gaps = 1/183 (0%)
Query: 42 SPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASG 101
S DV +Y +++ GL G+ D+A V EM+ PD YN I + +
Sbjct: 134 SIDVWTYNTLVKGLCDEGKIDEAIRVRDEMESLKLIPDVVTYNTLIDGCFKWRGSTEGFR 193
Query: 102 LMDEMVEK-GLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLC 160
L++EM + G+ PNA T+N+ + F + + + +M+ +G P+ + ++
Sbjct: 194 LLEEMKSRGGVEPNAVTHNIMVKWFGKEGKINEASDAVVKMVESGVSPDCFTYNTMINGF 253
Query: 161 KRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQ 220
+ K+ A ++ ++M KG I + + LC K EA + ++ ++G+ +
Sbjct: 254 CKAGKLGEAFRMMDEMARKGLKPDICTLNTMLHTLCMEKKPEEAYELTVKARKRGYILDE 313
Query: 221 VSF 223
V++
Sbjct: 314 VTY 316
>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Vitis vinifera]
Length = 746
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 117/226 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E GV PD+V+YN LI+ YC+ +E+A+++++ M + + P V +Y +II GL G+
Sbjct: 280 MEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGK 339
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A+ VL EM + G PD A YN + C + DA + DEM +G+ P+ +++
Sbjct: 340 YLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSA 399
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + L + + M G P+ L+ R + AL++ ++M+E+G
Sbjct: 400 LIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQG 459
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ + + + LC L EA++ F EM E+G P +F +
Sbjct: 460 CVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTL 505
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 122/248 (49%), Gaps = 3/248 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV PD+VS++ LI + K+ +++A K M++ ++PD + YT +IGG G
Sbjct: 385 MPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGV 444
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A V EM E GC D YN + C K L +A L EM E+G+ P+ T+
Sbjct: 445 MSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTT 504
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+ ++ + L+ M+ P+ + L+ CK E +E +LWNDM+ +
Sbjct: 505 LINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSE-MEKVNELWNDMISR 563
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI-KALMELANKQEA 238
+ +L + C+MG + EA + + EM+EKG + + ++ I K N +A
Sbjct: 564 RIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKA 623
Query: 239 LQNLSNKM 246
+ LSN +
Sbjct: 624 DEFLSNML 631
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 117/247 (47%), Gaps = 2/247 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G+ PD V Y LI +C++ + +A K+ ++M ++ DV++Y +I+ GL
Sbjct: 420 MKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKM 479
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++ EM E G +PD + I Y + A L + M+++ L P+ TYN
Sbjct: 480 LSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNT 539
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F +++ L+ M+ PN S L+ V A +LW++MVEKG
Sbjct: 540 LIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKG 599
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
F + I+ + + C G V+A++ M+ KG P +++ I ++ N A
Sbjct: 600 FEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAF 659
Query: 240 QNLSNKM 246
L NKM
Sbjct: 660 A-LVNKM 665
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 114/241 (47%), Gaps = 1/241 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E GV PD ++ LI+ Y KD + KA + E M ++ PDV++Y ++I G +
Sbjct: 490 MTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSE 549
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+K ++ +M YP+ +Y I YC + +A L DEMVEKG T N
Sbjct: 550 MEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNT 609
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + + + M+ G +P+ + L+ ++E ++ A L N M G
Sbjct: 610 IVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSG 669
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
++ +V+ + G++ EAE L+MIE+G P + ++ I + N +EA
Sbjct: 670 LLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAF 729
Query: 240 Q 240
+
Sbjct: 730 R 730
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 111/222 (50%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV+ ++ + N +I+ CK++++E + M ++ + PDV++Y ++I G ++A
Sbjct: 249 GVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEA 308
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+++ M G P YNA I C + A G++DEM++ G+SP+ TYN+
Sbjct: 309 FELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVE 368
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
++++ + ++ M G +P+ S L+ L + ++ AL+ + DM G
Sbjct: 369 CCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPD 428
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ +L C G + EA K EM+E+G V++ I
Sbjct: 429 NVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTI 470
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 65/110 (59%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ PD ++YN LI+ + K+ +++A+ +V KM + + PDVI+Y I+ G G+ +A
Sbjct: 634 GIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEA 693
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPN 114
++ +M E G PD + Y + I + L++A + DEM+++G P+
Sbjct: 694 ELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 743
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 78/149 (52%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G + I++ N ++ YC+ KA + + M + I PD I+Y ++I G
Sbjct: 595 MVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEEN 654
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A ++ +M+ G PD YN + + R+++A +M +M+E+G++P+ +TY
Sbjct: 655 MDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTS 714
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPN 149
N+L+ ++ ++ M+ G +P+
Sbjct: 715 LINGHVTQNNLKEAFRVHDEMLQRGFVPD 743
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 86/176 (48%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ P+ +SY LI+ YC V +A+++ ++M ++ +I+ +I+ G G KA
Sbjct: 565 IYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKAD 624
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+ L M G PD YN I + + + A L+++M GL P+ TYN+ F
Sbjct: 625 EFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGF 684
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
++ + + +M+ G P+ + L+ Q ++ A ++ ++M+++GF
Sbjct: 685 SRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGF 740
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 99/223 (44%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
++ G+ I + N L+ K V+ A++I +++ + +V + +I L +
Sbjct: 210 LKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQK 269
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ + L +M+E G +PD YN I YC L +A LMD M KGL P TYN
Sbjct: 270 IENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNA 329
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + M+ G P+T + L+ C R + + A +++++M +G
Sbjct: 330 IINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQG 389
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ L LL G L +A K F +M G P V +
Sbjct: 390 VVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIY 432
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 101/223 (45%), Gaps = 10/223 (4%)
Query: 13 YNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMK 72
++ L+ Y + R++ + + ++ + + + + S++GGL VG D A ++ +E+
Sbjct: 187 FDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVV 246
Query: 73 EYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLR 132
G + N I C +++ + + +M EKG+ P+ TYN + L
Sbjct: 247 RSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLE 306
Query: 133 SSWNLYCRMMGTGCLPNTQSCMF-----LVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
++ L M G G P C+F + LCK + + A + ++M++ G
Sbjct: 307 EAFELMDSMSGKGLKP----CVFTYNAIINGLCKTGKYLR-AKGVLDEMLKIGMSPDTAT 361
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALM 230
++L C +++AE+ F EM +G P VSF + L+
Sbjct: 362 YNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLL 404
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 90/222 (40%), Gaps = 22/222 (9%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
K + S++ +I + + R++ A ++ +M + +S I+ L L
Sbjct: 129 KHSLQSFSAMIHILVRSRRLPDAQAVILRM----VRKSGVSRVEIVESLVLT-------- 176
Query: 67 VLKEMKEYG-CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
YG C + ++ +R Y A++LR+ + KGL + N
Sbjct: 177 -------YGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGL 229
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSY 184
+ +W +Y ++ +G N + ++ LCK Q K+E +DM EKG
Sbjct: 230 VKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQ-KIENTKSFLSDMEEKGVFPD 288
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ + L + C G L EA + M KG KP ++ I
Sbjct: 289 VVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAI 330
>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 711
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 112/226 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G PD+V++N +I+ CK R V+ A ++ +M D + P+ ++YTS+I G +G+
Sbjct: 142 MMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTLGR 201
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A + +EM G PD ++N+ + + C R ++A+ + M KG PN TY +
Sbjct: 202 WEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGI 261
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + M G G + N L+ ++ ++ A+ + ++M +G
Sbjct: 262 LLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQG 321
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ L LC MG+L +A F +MI G +P+ V + +
Sbjct: 322 LSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSL 367
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 98/225 (43%), Gaps = 37/225 (16%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDED--ISPDVISYTSIIGGLGLV 58
M E+G PD SY ++ C D + ++A ++ M E+ SPDV++Y ++I G
Sbjct: 70 MTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHGFFKE 129
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
G+ KA ++ EM + G PD +N+ I C A+ + +A L+ +MV+ G+ PN TY
Sbjct: 130 GKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPNKVTY 189
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
+ + ++ M G G +P+ S WN
Sbjct: 190 TSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVS--------------------WNS--- 226
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
D LC G+ EA + F M KGH+P+ V++
Sbjct: 227 ------------FMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTY 259
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 107/233 (45%), Gaps = 1/233 (0%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
+P+I +N ++ CK+ +V A+ I + ++D D+I + ++I G LVG+ KA
Sbjct: 394 RPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFS 453
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
VL M G PD YN + Y + R+ D L EM +K + P TYN+ +
Sbjct: 454 VLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLF 513
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+ ++ + M+G G + + ++K R + A+ ++ + I
Sbjct: 514 RAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNIT 573
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEA 238
+ + + + + + EA+ F + + G P+ ++ I+ L++ + +EA
Sbjct: 574 TLNTMINSMYTVQRREEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEA 626
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 112/261 (42%), Gaps = 3/261 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDIS-PDVISYTSIIGGLGLVG 59
M GV+P+ V Y+ LI +C + KA ++V +M + I P++ + SI+ + G
Sbjct: 352 MIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEG 411
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ A + +K+ G D +N I YC+ + A ++D M+ G+ P+ TYN
Sbjct: 412 RVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYN 471
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
++ S + NL+ M P T + ++ R + A ++ ++M+
Sbjct: 472 TLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGC 531
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
G + +++ LC EA F ++ K + + + M ++E
Sbjct: 532 GTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEA 591
Query: 240 QNLSNKMALFGPSMIPKREEY 260
++L + A+ ++P Y
Sbjct: 592 KDLFS--AISDSGLVPNASTY 610
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 91/223 (40%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV P+ V+Y +I Y + E+A K+ +M + PD++S+ S + L G+
Sbjct: 177 MVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGR 236
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++ M G P+ Y + Y D + M G+ N + +
Sbjct: 237 SKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTI 296
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + + M G G P+ + L+ R ++ A+ +N M+ G
Sbjct: 297 LIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTG 356
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+V L C G LV+A++ EM+ G ++F
Sbjct: 357 VQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAF 399
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 105/232 (45%), Gaps = 1/232 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
++++G + DI+ +N LID YC ++ KA+ +++ M I PD +Y +++ G G+
Sbjct: 423 VKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGR 482
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D ++ +EM + P YN + A R A ++ EM+ G + + TYN+
Sbjct: 483 IDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNI 542
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ +N + ++ ++ N + ++ ++ E A L++ + + G
Sbjct: 543 ILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEAKDLFSAISDSG 602
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP-SQVSFRRIKALME 231
++ L G + EA+ F M + G P S++ I+ L+E
Sbjct: 603 LVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSGCAPCSRLLNDTIRTLLE 654
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 94/205 (45%), Gaps = 2/205 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ PD +YN L++ Y K +++ + +M D+ I P ++Y I+ GL G+
Sbjct: 458 MISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGR 517
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A+ +L EM G YN ++ C +A + ++ + N TT N
Sbjct: 518 TVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNT 577
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
Y + +L+ + +G +PN + +++ ++ VE A +++ M + G
Sbjct: 578 MINSMYTVQRREEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSG 637
Query: 181 FGS-YILVSDVLFDLLCDMGKLVEA 204
L++D + LL + G++V+A
Sbjct: 638 CAPCSRLLNDTIRTLL-EKGEIVKA 661
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/139 (17%), Positives = 64/139 (46%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G + +YN ++ C++ ++A + +K+ ++ ++ + ++I + V + ++A
Sbjct: 532 GTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEA 591
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+D+ + + G P+A+ Y IRN + +A + M + G +P + N R
Sbjct: 592 KDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSGCAPCSRLLNDTIRT 651
Query: 125 FYWSNDLRSSWNLYCRMMG 143
++ + N ++ G
Sbjct: 652 LLEKGEIVKAGNYMSKVDG 670
>gi|226505250|ref|NP_001147833.1| GTP binding protein [Zea mays]
gi|195614010|gb|ACG28835.1| GTP binding protein [Zea mays]
gi|413952711|gb|AFW85360.1| GTP binding protein [Zea mays]
Length = 547
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 120/246 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G++PD+V+Y LI +CK + ++A K+ +M P Y +I GLG +
Sbjct: 292 MIDAGIRPDVVAYGMLISAFCKSGKCDEAIKVFYEMEASGCMPSPHVYCMLINGLGSEER 351
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + K+ G + NA + YC A + + A ++DEM + + PN+ TY++
Sbjct: 352 LDEALKYFEHYKKSGFPMEVPTCNAVVGAYCRASKFQHAFKMVDEMRKCKVGPNSRTYDV 411
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
S ++N++ RM GC P + +V + +V++AL++W M EKG
Sbjct: 412 ILHYLIKSQKFEEAYNIFQRMGIDGCEPQLNTYTMMVGMFCSNGRVDMALKVWKQMGEKG 471
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ + L + LC +L EA F EM++KG +P F +K + + Q
Sbjct: 472 VLPCMHMFSALINGLCFENRLEEACVYFQEMLDKGIRPPGQLFSNLKEALVQGGRISLAQ 531
Query: 241 NLSNKM 246
++ K+
Sbjct: 532 EVALKL 537
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 103/240 (42%), Gaps = 1/240 (0%)
Query: 12 SYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEM 71
++ ++ Y + R+V++A + EKM + ++ Y +I L Q KA+ + KEM
Sbjct: 197 TFKLIVRRYARARKVKEAVETFEKMSIFGLKTELSDYNWLIDTLSKSKQVKKAQAIYKEM 256
Query: 72 KEYGCY-PDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSND 130
K G + PD Y + + K L + EM++ G+ P+ Y + F S
Sbjct: 257 KRKGKFVPDLKTYTVLMEGWGHEKDLLMVKTMYQEMIDAGIRPDVVAYGMLISAFCKSGK 316
Query: 131 LRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDV 190
+ ++ M +GC+P+ L+ +E+++ AL+ + + GF + +
Sbjct: 317 CDEAIKVFYEMEASGCMPSPHVYCMLINGLGSEERLDEALKYFEHYKKSGFPMEVPTCNA 376
Query: 191 LFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFG 250
+ C K A K EM + P+ ++ I + + K E N+ +M + G
Sbjct: 377 VVGAYCRASKFQHAFKMVDEMRKCKVGPNSRTYDVILHYLIKSQKFEEAYNIFQRMGIDG 436
>gi|255556314|ref|XP_002519191.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541506|gb|EEF43055.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 719
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 129/252 (51%), Gaps = 4/252 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ ++ SYN +ID +CK ++KA ++M+ + I P+++++ ++I G G+
Sbjct: 453 MVKDGLLCNVCSYNMVIDCFCKTSMMDKATNTFKEMQYKGIPPNLVTFNTLIDGYCKGGE 512
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
K+RD+L + E+G PD +++ I C AK++ DA G EMV GLSPNA TYN+
Sbjct: 513 ICKSRDLLVMLLEHGFKPDIFTFSSIIDGLCRAKQIEDALGCFSEMVMWGLSPNAVTYNI 572
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
D+ S L +M G P+ S L++ R KVE A +L++ M+ G
Sbjct: 573 LIHSLCIIGDVPRSMKLLRKMQTDGINPDVFSFNALIQSFCRMGKVEDAKKLFSSMLSLG 632
Query: 181 F--GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEA 238
+Y V+ + C G+ EA++ FL M G P + I + ++ EA
Sbjct: 633 LIPDNYTYVA--FIKVFCQSGRFNEAKELFLSMEANGCMPDSFTCNIILDALVKQDQFEA 690
Query: 239 LQNLSNKMALFG 250
Q ++ + +G
Sbjct: 691 AQKIAKTCSEWG 702
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/261 (20%), Positives = 110/261 (42%), Gaps = 35/261 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G P++ +Y LID + ++V++A++++E M+ +SP + S I G+
Sbjct: 278 MEGLGYSPNVFTYTILIDGFFNAKKVDEAFRVLETMKARKVSPSEATIRSFIHGVFRCVA 337
Query: 61 PDKARDV-----------------------------------LKEMKEYGCYPDAAAYNA 85
P+KA ++ LK+ + G PD+A +N
Sbjct: 338 PNKAFELAIEFIEREPVLQRLACDTLLCCLSSKNMAREAGALLKKFGKIGHKPDSATFNI 397
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
A+ L + ++D VE+G+ +TY + Y + + + + +M+ G
Sbjct: 398 AMNCLIKGFDLNEVCNILDRFVEQGMKFGFSTYLALIKALYMAGKVTEGNHYFNQMVKDG 457
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
L N S ++ + ++ A + +M KG ++ + L D C G++ ++
Sbjct: 458 LLCNVCSYNMVIDCFCKTSMMDKATNTFKEMQYKGIPPNLVTFNTLIDGYCKGGEICKSR 517
Query: 206 KSFLEMIEKGHKPSQVSFRRI 226
+ ++E G KP +F I
Sbjct: 518 DLLVMLLEHGFKPDIFTFSSI 538
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 118/261 (45%), Gaps = 4/261 (1%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
++G KPD ++N ++ K + + I+++ ++ + +Y ++I L + G+
Sbjct: 385 KIGHKPDSATFNIAMNCLIKGFDLNEVCNILDRFVEQGMKFGFSTYLALIKALYMAGKVT 444
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
+ +M + G + +YN I +C + A+ EM KG+ PN T+N
Sbjct: 445 EGNHYFNQMVKDGLLCNVCSYNMVIDCFCKTSMMDKATNTFKEMQYKGIPPNLVTFNTLI 504
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
+ ++ S +L ++ G P+ + ++ R +++E AL +++MV G
Sbjct: 505 DGYCKGGEICKSRDLLVMLLEHGFKPDIFTFSSIIDGLCRAKQIEDALGCFSEMVMWGLS 564
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQN 241
+ ++L LC +G + + K +M G P SF I++ + ++A +
Sbjct: 565 PNAVTYNILIHSLCIIGDVPRSMKLLRKMQTDGINPDVFSFNALIQSFCRMGKVEDAKKL 624
Query: 242 LSNKMALFGPSMIPKREEYLA 262
S+ ++L +IP Y+A
Sbjct: 625 FSSMLSL---GLIPDNYTYVA 642
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 105/255 (41%), Gaps = 35/255 (13%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
KPD +YN LI C+ V++A ++V++M SP+V +YT +I G + D+A
Sbjct: 249 KPDRFTYNILIHGVCRSGVVDEALRLVKQMEGLGYSPNVFTYTILIDGFFNAKKVDEAFR 308
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNY--CIA------------------KRL---------- 96
VL+ MK P A + I C+A +RL
Sbjct: 309 VLETMKARKVSPSEATIRSFIHGVFRCVAPNKAFELAIEFIEREPVLQRLACDTLLCCLS 368
Query: 97 -----RDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQ 151
R+A L+ + + G P++ T+N+ DL N+ R + G
Sbjct: 369 SKNMAREAGALLKKFGKIGHKPDSATFNIAMNCLIKGFDLNEVCNILDRFVEQGMKFGFS 428
Query: 152 SCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEM 211
+ + L+K KV +N MV+ G + +++ D C + +A +F EM
Sbjct: 429 TYLALIKALYMAGKVTEGNHYFNQMVKDGLLCNVCSYNMVIDCFCKTSMMDKATNTFKEM 488
Query: 212 IEKGHKPSQVSFRRI 226
KG P+ V+F +
Sbjct: 489 QYKGIPPNLVTFNTL 503
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 60/120 (50%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
+G+ P YN +ID K ++ AY ++M ++ PD +Y +I G+ G D+
Sbjct: 211 LGISPSTRLYNAVIDALVKSNSLDLAYLKFQQMSADNCKPDRFTYNILIHGVCRSGVVDE 270
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
A ++K+M+ G P+ Y I + AK++ +A +++ M + +SP+ T F
Sbjct: 271 ALRLVKQMEGLGYSPNVFTYTILIDGFFNAKKVDEAFRVLETMKARKVSPSEATIRSFIH 330
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 69/183 (37%)
Query: 41 ISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDAS 100
ISP Y ++I L D A ++M C PD YN I C + + +A
Sbjct: 213 ISPSTRLYNAVIDALVKSNSLDLAYLKFQQMSADNCKPDRFTYNILIHGVCRSGVVDEAL 272
Query: 101 GLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLC 160
L+ +M G SPN TY + F+ + + ++ + M P+ + +
Sbjct: 273 RLVKQMEGLGYSPNVFTYTILIDGFFNAKKVDEAFRVLETMKARKVSPSEATIRSFIHGV 332
Query: 161 KRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQ 220
R A +L + +E+ L D L L EA + + GHKP
Sbjct: 333 FRCVAPNKAFELAIEFIEREPVLQRLACDTLLCCLSSKNMAREAGALLKKFGKIGHKPDS 392
Query: 221 VSF 223
+F
Sbjct: 393 ATF 395
Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 48/115 (41%)
Query: 110 GLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIA 169
G+SP+ YN SN L ++ + +M C P+ + L+ R V+ A
Sbjct: 212 GISPSTRLYNAVIDALVKSNSLDLAYLKFQQMSADNCKPDRFTYNILIHGVCRSGVVDEA 271
Query: 170 LQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
L+L M G+ + +L D + K+ EA + M + PS+ + R
Sbjct: 272 LRLVKQMEGLGYSPNVFTYTILIDGFFNAKKVDEAFRVLETMKARKVSPSEATIR 326
>gi|302767258|ref|XP_002967049.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
gi|300165040|gb|EFJ31648.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
Length = 454
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 112/256 (43%), Gaps = 33/256 (12%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ P V+Y LIDV+CK Q E AY +++ M SP V SY SII GL +
Sbjct: 102 MEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRK 161
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + +EMK GC PD YN I C+ +RL +A L+ MVE P+ T+
Sbjct: 162 VDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTA 221
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLC------------------- 160
++ ++ ++ L+ M GC P+ + LV KLC
Sbjct: 222 LIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCIRRKLRPALSVVRNYPACP 281
Query: 161 -------------KRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKS 207
R+ + A +L M +G ++ F L D + + A +
Sbjct: 282 EAVILYTPIFRELGRRRGFDRAARLLQKMARRGVAPNVVTYTAFFKGLGDWKEGMRAYRE 341
Query: 208 FLEMIEKGHKPSQVSF 223
F M+E+G +P V++
Sbjct: 342 FRRMLEQGIEPDMVAY 357
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 102/226 (45%), Gaps = 9/226 (3%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
KP+ +SY L+ C+ +++KA + +M E + PDV +Y +I L + +A +
Sbjct: 7 KPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIE 66
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
+ M E PD YN + C R+ A L M G++P+ TY VF
Sbjct: 67 FFETMPE----PDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFC 122
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+++ L M C P S C + LCK + KV+ A QL+ +M G
Sbjct: 123 KMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNR-KVDQAYQLFEEMKLAGCKPDR 181
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALME 231
+ + L LC +L EA+ M+E +P +++F AL+E
Sbjct: 182 VTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITF---TALIE 224
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 99/216 (45%), Gaps = 6/216 (2%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD+ +YN +ID CK R++ +A + E M + PDV++Y +++GGL G+ +A +
Sbjct: 43 PDVFTYNVVIDTLCKARRISRAIEFFETMPE----PDVVTYNTLLGGLCKNGRVAQACSL 98
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
M+ G P Y I +C + A GL+ M + SP +Y
Sbjct: 99 FGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCK 158
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+ + ++ L+ M GC P+ + L+ LC +Q ++ A L MVE F +
Sbjct: 159 NRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQ-RLHEAKDLLTVMVENSFQPDKI 217
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
L + LC ++ EA F M ++G P V+
Sbjct: 218 TFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVT 253
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 120/278 (43%), Gaps = 35/278 (12%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G KPD V+YN LI C +++ +A ++ M + PD I++T++I GL +
Sbjct: 172 MKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDR 231
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRD---------------------- 98
+A + + M + GC PD + + CI ++LR
Sbjct: 232 IKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCIRRKLRPALSVVRNYPACPEAVILYTPIF 291
Query: 99 -----------ASGLMDEMVEKGLSPNATTYNLFFRVFY-WSNDLRSSWNLYCRMMGTGC 146
A+ L+ +M +G++PN TY FF+ W +R ++ + RM+ G
Sbjct: 292 RELGRRRGFDRAARLLQKMARRGVAPNVVTYTAFFKGLGDWKEGMR-AYREFRRMLEQGI 350
Query: 147 LPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEK 206
P+ + LV + ++++A ++ M + G I+ + L C GK+ +
Sbjct: 351 EPDMVAYNVLVDGFCKANRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGE 410
Query: 207 SFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSN 244
M+ +G +P ++ + A + + +A + N
Sbjct: 411 LLHTMVSRGRQPDVATWSTLVAGLFRVGQVDAAYSFLN 448
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 78/171 (45%)
Query: 10 IVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLK 69
++ Y + + R ++A ++++KM ++P+V++YT+ GLG + +A +
Sbjct: 284 VILYTPIFRELGRRRGFDRAARLLQKMARRGVAPNVVTYTAFFKGLGDWKEGMRAYREFR 343
Query: 70 EMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSN 129
M E G PD AYN + +C A RL A ++ M + GL PN TYN
Sbjct: 344 RMLEQGIEPDMVAYNVLVDGFCKANRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKG 403
Query: 130 DLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + L M+ G P+ + LV R +V+ A N + +G
Sbjct: 404 KVEAIGELLHTMVSRGRQPDVATWSTLVAGLFRVGQVDAAYSFLNLAMSQG 454
>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 735
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 116/223 (52%), Gaps = 1/223 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PDI ++N LID YCK +++ A I++ M ++PDVI+Y SI+ GL +P+
Sbjct: 428 GYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDV 487
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ K + E GC P+ YN I + C A+++ +A L++E+ +GL P+ ++
Sbjct: 488 METFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISG 547
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCM-FLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
F + DL ++ L+ RM + +T + ++ + +++A +L+++M +KG
Sbjct: 548 FCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDP 607
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
V+ D C +G + L+ IE G PS +F R+
Sbjct: 608 DSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIGFVPSLTTFGRV 650
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 95/207 (45%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+KP IV YN LI + V KA +++ M E +SPD+ +Y +I GL +G A
Sbjct: 358 GLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDA 417
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++L G PD +N I YC ++ +A G++D M G++P+ TYN
Sbjct: 418 NNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNG 477
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + +M GCLPN + L++ + KV AL L ++ +G
Sbjct: 478 LCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPD 537
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEM 211
+ + C+ G L EA + F M
Sbjct: 538 PVSFGTVISGFCNNGDLDEAYQLFRRM 564
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 98/214 (45%), Gaps = 7/214 (3%)
Query: 20 YCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPD 79
Y + +V++A + E+M + P + SY +I+ L G ++A V MK G PD
Sbjct: 86 YGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEGIAPD 145
Query: 80 AAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYC 139
+ I+++C KR A L++ M +G NA Y FY N ++ L+
Sbjct: 146 VCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQVEAYELFN 205
Query: 140 RMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMG 199
+M+ G P+ + L+ + ++ ++ +L N +++ G + ++ LC G
Sbjct: 206 KMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKG 265
Query: 200 -------KLVEAEKSFLEMIEKGHKPSQVSFRRI 226
K+VEAE +M+ KG +P ++ I
Sbjct: 266 VLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTI 299
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 102/223 (45%), Gaps = 2/223 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PD +Y LI C+D ++ A + E+ + + P ++ Y ++I GL G KA
Sbjct: 323 GFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKA 382
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++ +M + G PD YN I C + DA+ L++ + KG P+ T+N
Sbjct: 383 LQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDG 442
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSC-MFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
+ + ++ + M G P+ + L LCK K E ++ + ++EKG
Sbjct: 443 YCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCK-AAKPEDVMETFKMIMEKGCLP 501
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
I+ ++L + LC K+ EA E+ +G P VSF +
Sbjct: 502 NIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTV 544
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 106/216 (49%), Gaps = 7/216 (3%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E G P+I++YN LI+ CK R+V +A ++E++R+ + PD +S+ ++I G G D
Sbjct: 496 EKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLD 555
Query: 63 KARDVLKEM-KEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
+A + + M ++Y A YN I + + A L EM +KG P++ TY +
Sbjct: 556 EAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVM 615
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
F ++ S ++ + + G +P+ + ++ Q +V A+ + + MV G
Sbjct: 616 IDGFCKVGNVNSGYDFLLKEIEIGFVPSLTTFGRVINCLCVQHRVHEAVGIVHLMVRTG- 674
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLE-MIEKGH 216
+V + + + K V A K +E +++K H
Sbjct: 675 ----VVPEAVVTIFDADKKAVAAPKIIVEDLLKKSH 706
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 116/241 (48%), Gaps = 3/241 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G++PD +YN +I Y K +++ A +I++ + + PD +Y S+I G+ G
Sbjct: 284 MVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGD 343
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A + +E G P YN I+ + A LM++M ++G+SP+ TYNL
Sbjct: 344 IDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNL 403
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+ + NL + G LP+ + L+ CKR K++ A+ + + M
Sbjct: 404 VINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRL-KMDNAIGILDSMWSH 462
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEA 238
G ++ + + + LC K + ++F ++EKG P+ +++ I++L + EA
Sbjct: 463 GVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEA 522
Query: 239 L 239
L
Sbjct: 523 L 523
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 118/260 (45%), Gaps = 9/260 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G+ PD+ ++ I +C+ ++ A +++ M + + + Y ++I G
Sbjct: 137 MKHEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENY 196
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++ +M G +P A +N + C L++ L++++++ G+ PN T+N+
Sbjct: 197 QVEAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNI 256
Query: 121 FFR------VFYWSND-LRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLW 173
F + V +N + + N +M+ G P+ + ++ + K++ A ++
Sbjct: 257 FIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRIL 316
Query: 174 NDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMEL 232
D KGF L +C G + A F E + KG KPS V + IK L +
Sbjct: 317 KDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQ 376
Query: 233 ANKQEALQNLSNKMALFGPS 252
+ALQ L N M+ G S
Sbjct: 377 GLVLKALQ-LMNDMSKEGMS 395
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 98/224 (43%), Gaps = 7/224 (3%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
+P I SYN ++++ + +A+K+ +M+ E I+PDV ++T I +P A
Sbjct: 108 EPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEGIAPDVCTFTIRIKSFCRTKRPLAALR 167
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
+L M GC +A Y I + +A L ++M+ G+ P+ T+N +
Sbjct: 168 LLNNMPSQGCELNAVVYCTVISGFYEENYQVEAYELFNKMLRLGIFPHIATFNKLMHILC 227
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSC-MFLVKLCKR------QEKVEIALQLWNDMVEK 179
L+ L +++ G PN + +F+ LC++ KV A + MV K
Sbjct: 228 KKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNK 287
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G + + +GK+ +A + + KG P + ++
Sbjct: 288 GLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTY 331
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 90/215 (41%), Gaps = 5/215 (2%)
Query: 28 KAYKIVEKMRDED-ISPDVISYTSIIGGLGLVGQPDKARDVLKEMK-EYGCYPDAAAYNA 85
KA I ++ ED ++Y +I LG G+ D VL EM+ Y +
Sbjct: 22 KALSIFNSVKKEDGFKHTFLTYKRMIEKLGFHGEFDAMERVLMEMRLNVDNSLLEGVYVS 81
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
A+RNY ++++A + + M P+ +YN + + +Y RM G
Sbjct: 82 AMRNYGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEG 141
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
P+ + +K R ++ AL+L N+M +G +V + + VEA
Sbjct: 142 IAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQVEAY 201
Query: 206 KSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ F +M+ G P +F + LM + K+ LQ
Sbjct: 202 ELFNKMLRLGIFPHIATFNK---LMHILCKKGHLQ 233
>gi|297839365|ref|XP_002887564.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297333405|gb|EFH63823.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 451
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 93/176 (52%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ P++ +YN ++ + + Q+ +A++ +M+ + DV++YT+++ G G+ G+
Sbjct: 219 MVDRGINPNLTTYNTMLQGFFRAGQIRQAWEFFLEMKKRNCEIDVVTYTTVVHGFGVAGE 278
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ R+V EM G P A YNA I+ C + +A + +EMV KG PN TTYN+
Sbjct: 279 IKRTRNVFDEMIREGVLPSVATYNAFIQVLCKKDSVENAVVMFEEMVRKGYEPNVTTYNV 338
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDM 176
R + + L RM GC PN Q+ +++ +VE AL L+ M
Sbjct: 339 LIRGLFHAGKFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKM 394
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 114/219 (52%), Gaps = 1/219 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G D+ S+N ++DV CK ++VEKAY++ +R S D ++Y I+ G L+ +
Sbjct: 150 MHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGR-FSADTVTYNVIVNGWCLIKR 208
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA +VLKEM + G P+ YN ++ + A ++R A EM ++ + TY
Sbjct: 209 TPKALEVLKEMVDRGINPNLTTYNTMLQGFFRAGQIRQAWEFFLEMKKRNCEIDVVTYTT 268
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + +++ + N++ M+ G LP+ + +++ +++ VE A+ ++ +MV KG
Sbjct: 269 VVHGFGVAGEIKRTRNVFDEMIREGVLPSVATYNAFIQVLCKKDSVENAVVMFEEMVRKG 328
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
+ + +VL L GK E+ M +G +P+
Sbjct: 329 YEPNVTTYNVLIRGLFHAGKFSRGEELMQRMENEGCEPN 367
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 119/250 (47%), Gaps = 7/250 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR + + P ++ + + Y + +KA K+ M + D+ S+ +I+ L +
Sbjct: 115 MRSLRIGPSPKTFAIVAERYASSGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKR 174
Query: 61 PDKARDVLKEMKEYGCY-PDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+KA ++ + ++ G + D YN + +C+ KR A ++ EMV++G++PN TTYN
Sbjct: 175 VEKAYELFRALR--GRFSADTVTYNVIVNGWCLIKRTPKALEVLKEMVDRGINPNLTTYN 232
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ F+ + +R +W + M C + + +V +++ ++++M+ +
Sbjct: 233 TMLQGFFRAGQIRQAWEFFLEMKKRNCEIDVVTYTTVVHGFGVAGEIKRTRNVFDEMIRE 292
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALME---LANK 235
G + + +LC + A F EM+ KG++P+ ++ I+ L +
Sbjct: 293 GVLPSVATYNAFIQVLCKKDSVENAVVMFEEMVRKGYEPNVTTYNVLIRGLFHAGKFSRG 352
Query: 236 QEALQNLSNK 245
+E +Q + N+
Sbjct: 353 EELMQRMENE 362
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 45/98 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G +P++ +YN LI + + +++++M +E P+ +Y +I +
Sbjct: 324 MVRKGYEPNVTTYNVLIRGLFHAGKFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSE 383
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRD 98
+KA + ++M C P+ YN I + KR D
Sbjct: 384 VEKALGLFEKMGTGDCLPNLDTYNILISGMFVRKRSED 421
>gi|125590530|gb|EAZ30880.1| hypothetical protein OsJ_14954 [Oryza sativa Japonica Group]
Length = 442
Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 109/226 (48%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PD+V+YN L++ CK R +A ++++ MR E +P+ ++Y ++ G+ G D A
Sbjct: 37 GCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDA 96
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++L+ + +GC P YN ++ C A+R DA L+ EM+ + PN T+N+
Sbjct: 97 LELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYS 156
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
L+ + L +M GC N + ++ Q V+ A+ L + M G
Sbjct: 157 LCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPD 216
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALM 230
I+ + L LC + V+AE+ M + G P V+F + +
Sbjct: 217 IVTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNTLIGFL 262
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 110/219 (50%), Gaps = 1/219 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P+ ++N +I C+ +++A +++EKM + ++++Y +II GL D A +
Sbjct: 145 PNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGL 204
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L +MK YGC PD YN ++ C A R DA LMD M + G P+ T+N
Sbjct: 205 LSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQ 264
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ + ++ +M GC PN+ + ++ + K++ AL+L+N+M KGF +
Sbjct: 265 KGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPD-KI 323
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+L + L D + EA ++ ++ + G P V + I
Sbjct: 324 YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAI 362
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 122/257 (47%), Gaps = 4/257 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G P+ V+YN L+D C + V+ A +++ + P ++Y +++ GL +
Sbjct: 68 MRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAER 127
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +++ EM C P+ A +N I + C L+ A L+++M + G + N TYN
Sbjct: 128 WGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNA 187
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
++ + L +M GC P+ + L+K LC V+ A +L ++M +
Sbjct: 188 IINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVD-AEELMDNMTQN 246
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
G + + L LC G +V+A + F +M +KG P+ +++ I + + A K +
Sbjct: 247 GCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQA 306
Query: 240 QNLSNKMAL--FGPSMI 254
L N+M F P I
Sbjct: 307 LELFNEMGHKGFNPDKI 323
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 103/223 (46%), Gaps = 1/223 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G +IV+YN +I+ C+ R V+ A ++ KM+ PD+++Y +++ GL +
Sbjct: 173 MSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAR 232
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +++ M + GC PD +N I C + DA + +M +KG +PN+ TY+
Sbjct: 233 WVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYST 292
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L + L+ M G P+ + L + + +E A+Q + + G
Sbjct: 293 IISGLAKATKLDQALELFNEMGHKGFNPD-KIYQLLAECLNDDDTIEEAIQTVRKLQDSG 351
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ ++ + + LC GK A M+ G P +++
Sbjct: 352 ISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTY 394
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 111/239 (46%), Gaps = 2/239 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G KP V+YN ++ C + A ++V +M E+ P+ ++ +I L G +A
Sbjct: 107 GCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQA 166
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+L++M ++GC + YNA I C + + A GL+ +M G P+ TYN +
Sbjct: 167 IQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKG 226
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGS 183
+ + L M GCLP+ + L+ LC++ V+ A++++ M +KG
Sbjct: 227 LCSAARWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVD-AIEVFKQMPDKGCTP 285
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNL 242
+ + L KL +A + F EM KG P ++ + L + +EA+Q +
Sbjct: 286 NSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKIYQLLAECLNDDDTIEEAIQTV 344
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 92/211 (43%), Gaps = 2/211 (0%)
Query: 41 ISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDAS 100
+ P+ +Y +I L GQ A VL +M GC PD YN + C + R A
Sbjct: 3 VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 62
Query: 101 GLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLC 160
L+D M +G +PN TYN+ D+ + L + GC P+T + ++K
Sbjct: 63 ELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGL 122
Query: 161 KRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQ 220
E+ A +L +M+ + +V+ LC G L +A + +M + G +
Sbjct: 123 CSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANI 182
Query: 221 VSFRR-IKALMELANKQEALQNLSNKMALFG 250
V++ I L E N A+ LS KM +G
Sbjct: 183 VTYNAIINGLCEQRNVDGAMGLLS-KMKSYG 212
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 71/184 (38%), Gaps = 34/184 (18%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G PD V++N LI C+ + A ++ ++M D+ +P+ I+Y++II GL +
Sbjct: 243 MTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATK 302
Query: 61 PDKARDVLKEMKEYGCYPD----------------------------------AAAYNAA 86
D+A ++ EM G PD YNA
Sbjct: 303 LDQALELFNEMGHKGFNPDKIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAI 362
Query: 87 IRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGC 146
+ C + A +M MV G P+ TY + + L + L ++
Sbjct: 363 LLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKLCSRDV 422
Query: 147 LPNT 150
L N+
Sbjct: 423 LVNS 426
>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 117/226 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E GV PD+V+YN LI+ YC+ +E+A+++++ M + + P V +Y +II GL G+
Sbjct: 123 MEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGK 182
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A+ VL EM + G PD A YN + C + DA + DEM +G+ P+ +++
Sbjct: 183 YLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSA 242
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + L + + M G P+ L+ R + AL++ ++M+E+G
Sbjct: 243 LIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQG 302
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ + + + LC L EA++ F EM E+G P +F +
Sbjct: 303 CVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTL 348
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 122/248 (49%), Gaps = 3/248 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV PD+VS++ LI + K+ +++A K M++ ++PD + YT +IGG G
Sbjct: 228 MPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGV 287
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A V EM E GC D YN + C K L +A L EM E+G+ P+ T+
Sbjct: 288 MSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTT 347
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+ ++ + L+ M+ P+ + L+ CK E +E +LWNDM+ +
Sbjct: 348 LINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSE-MEKVNELWNDMISR 406
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI-KALMELANKQEA 238
+ +L + C+MG + EA + + EM+EKG + + ++ I K N +A
Sbjct: 407 RIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKA 466
Query: 239 LQNLSNKM 246
+ LSN +
Sbjct: 467 DEFLSNML 474
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 117/247 (47%), Gaps = 2/247 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G+ PD V Y LI +C++ + +A K+ ++M ++ DV++Y +I+ GL
Sbjct: 263 MKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKM 322
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++ EM E G +PD + I Y + A L + M+++ L P+ TYN
Sbjct: 323 LSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNT 382
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F +++ L+ M+ PN S L+ V A +LW++MVEKG
Sbjct: 383 LIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKG 442
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
F + I+ + + C G V+A++ M+ KG P +++ I ++ N A
Sbjct: 443 FEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAF 502
Query: 240 QNLSNKM 246
L NKM
Sbjct: 503 A-LVNKM 508
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 114/241 (47%), Gaps = 1/241 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E GV PD ++ LI+ Y KD + KA + E M ++ PDV++Y ++I G +
Sbjct: 333 MTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSE 392
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+K ++ +M YP+ +Y I YC + +A L DEMVEKG T N
Sbjct: 393 MEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNT 452
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + + + M+ G +P+ + L+ ++E ++ A L N M G
Sbjct: 453 IVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSG 512
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
++ +V+ + G++ EAE L+MIE+G P + ++ I + N +EA
Sbjct: 513 LLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAF 572
Query: 240 Q 240
+
Sbjct: 573 R 573
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 111/222 (50%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV+ ++ + N +I+ CK++++E + M ++ + PDV++Y ++I G ++A
Sbjct: 92 GVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEA 151
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+++ M G P YNA I C + A G++DEM++ G+SP+ TYN+
Sbjct: 152 FELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVE 211
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
++++ + ++ M G +P+ S L+ L + ++ AL+ + DM G
Sbjct: 212 CCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPD 271
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ +L C G + EA K EM+E+G V++ I
Sbjct: 272 NVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTI 313
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 65/110 (59%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ PD ++YN LI+ + K+ +++A+ +V KM + + PDVI+Y I+ G G+ +A
Sbjct: 477 GIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEA 536
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPN 114
++ +M E G PD + Y + I + L++A + DEM+++G P+
Sbjct: 537 ELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 586
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 78/149 (52%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G + I++ N ++ YC+ KA + + M + I PD I+Y ++I G
Sbjct: 438 MVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEEN 497
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A ++ +M+ G PD YN + + R+++A +M +M+E+G++P+ +TY
Sbjct: 498 MDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTS 557
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPN 149
N+L+ ++ ++ M+ G +P+
Sbjct: 558 LINGHVTQNNLKEAFRVHDEMLQRGFVPD 586
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 86/176 (48%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ P+ +SY LI+ YC V +A+++ ++M ++ +I+ +I+ G G KA
Sbjct: 408 IYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKAD 467
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+ L M G PD YN I + + + A L+++M GL P+ TYN+ F
Sbjct: 468 EFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGF 527
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
++ + + +M+ G P+ + L+ Q ++ A ++ ++M+++GF
Sbjct: 528 SRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGF 583
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 99/223 (44%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
++ G+ I + N L+ K V+ A++I +++ + +V + +I L +
Sbjct: 53 LKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQK 112
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ + L +M+E G +PD YN I YC L +A LMD M KGL P TYN
Sbjct: 113 IENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNA 172
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + M+ G P+T + L+ C R + + A +++++M +G
Sbjct: 173 IINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQG 232
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ L LL G L +A K F +M G P V +
Sbjct: 233 VVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIY 275
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 101/223 (45%), Gaps = 10/223 (4%)
Query: 13 YNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMK 72
++ L+ Y + R++ + + ++ + + + + S++GGL VG D A ++ +E+
Sbjct: 30 FDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVV 89
Query: 73 EYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLR 132
G + N I C +++ + + +M EKG+ P+ TYN + L
Sbjct: 90 RSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLE 149
Query: 133 SSWNLYCRMMGTGCLPNTQSCMF-----LVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
++ L M G G P C+F + LCK + + A + ++M++ G
Sbjct: 150 EAFELMDSMSGKGLKP----CVFTYNAIINGLCKTGKYLR-AKGVLDEMLKIGMSPDTAT 204
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALM 230
++L C +++AE+ F EM +G P VSF + L+
Sbjct: 205 YNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLL 247
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 66/155 (42%), Gaps = 3/155 (1%)
Query: 74 YG-CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLR 132
YG C + ++ +R Y A++LR+ + KGL + N +
Sbjct: 20 YGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVD 79
Query: 133 SSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYILVSDVL 191
+W +Y ++ +G N + ++ LCK Q K+E +DM EKG ++ + L
Sbjct: 80 LAWEIYQEVVRSGVQVNVYTLNIMINALCKNQ-KIENTKSFLSDMEEKGVFPDVVTYNTL 138
Query: 192 FDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ C G L EA + M KG KP ++ I
Sbjct: 139 INAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAI 173
>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
restorer; AltName: Full=Protein PPR; AltName:
Full=Restorer for CMS; Flags: Precursor
gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
Length = 791
Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 117/242 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ PD+V+YN +I CK + ++KA +++ M + PD ++Y SI+ G GQ
Sbjct: 222 MLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQ 281
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
P +A LK+M+ G PD Y+ + C R +A + D M ++GL P TTY
Sbjct: 282 PKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGT 341
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + L L M+ G P+ L+ +Q KV+ A+ +++ M ++G
Sbjct: 342 LLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQG 401
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ + +LC G++ +A F +MI++G P + + + + NK E +
Sbjct: 402 LNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAE 461
Query: 241 NL 242
L
Sbjct: 462 EL 463
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 119/245 (48%), Gaps = 1/245 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G+ P+ V+Y +I + CK +VE A E+M DE +SP I Y S+I GL +
Sbjct: 397 MRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNK 456
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A +++ EM + G + +N+ I ++C R+ ++ L + MV G+ PN TYN
Sbjct: 457 WERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNT 516
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + + L M+ G PNT + L+ + ++E AL L+ +M G
Sbjct: 517 LINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSG 576
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI-KALMELANKQEAL 239
I+ +++ L + A++ ++ + E G + ++ I L + +AL
Sbjct: 577 VSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDAL 636
Query: 240 QNLSN 244
Q N
Sbjct: 637 QMFQN 641
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 112/226 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV PD ++YN ++ YC Q ++A ++KMR + + PDV++Y+ ++ L G+
Sbjct: 257 MVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGR 316
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR + M + G P+ Y ++ Y L + GL+D MV G+ P+ +++
Sbjct: 317 CMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSI 376
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + ++ +M G PN + ++ + + +VE A+ + M+++G
Sbjct: 377 LICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEG 436
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+V + L LC K AE+ LEM+++G + + F I
Sbjct: 437 LSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSI 482
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 104/227 (45%), Gaps = 5/227 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDE---DISPDVISYTSIIGGLGL 57
M E+G P++ SYN L+ C + + ++A +++ M D+ PDV+SYT++I G
Sbjct: 149 MTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFK 208
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
G DKA EM + G PD YN+ I C A+ + A +++ MV+ G+ P+ T
Sbjct: 209 EGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMT 268
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDM 176
YN + S + + +M G P+ + L+ LCK +E A ++++ M
Sbjct: 269 YNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCME-ARKIFDSM 327
Query: 177 VEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++G I L G LVE M+ G P F
Sbjct: 328 TKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVF 374
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 122/253 (48%), Gaps = 6/253 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR GV+PD+V+Y+ L+D CK+ + +A KI + M + P++ +Y +++ G G
Sbjct: 292 MRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGA 351
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ +L M G +PD ++ I Y ++ A + +M ++GL+PNA TY
Sbjct: 352 LVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGA 411
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNT---QSCMFLVKLCKRQEKVEIALQLWNDMV 177
+ S + + + +M+ G P S + + C + E+ E +L +M+
Sbjct: 412 VIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAE---ELILEML 468
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQE 237
++G + + + D C G+++E+EK F M+ G KP+ +++ + LA K +
Sbjct: 469 DRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMD 528
Query: 238 ALQNLSNKMALFG 250
L + M G
Sbjct: 529 EAMKLLSGMVSVG 541
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 110/258 (42%), Gaps = 41/258 (15%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
V PD+ +Y LI C+ +++ + + + + D I++T ++ GL + A
Sbjct: 83 VTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAM 142
Query: 66 D-VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEK---GLSPNATTYNLF 121
D VL+ M E GC P+ +YN ++ C R ++A L+ M + G P+ +Y
Sbjct: 143 DIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTV 202
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F+ D +++ Y M+ G LP+ + + LCK Q ++ A+++ N MV+ G
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQ-AMDKAMEVLNTMVKNG 261
Query: 181 -----------FGSY------------------------ILVSDVLFDLLCDMGKLVEAE 205
Y ++ +L D LC G+ +EA
Sbjct: 262 VMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEAR 321
Query: 206 KSFLEMIEKGHKPSQVSF 223
K F M ++G KP ++
Sbjct: 322 KIFDSMTKRGLKPEITTY 339
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 102/252 (40%), Gaps = 43/252 (17%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G+KP+ V+Y+ LI+ YCK ++E A + ++M +SPD+I+Y I+ GL +
Sbjct: 537 MVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRR 596
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASG------LMDEMVE------ 108
A+++ + E G + + YN + C K DA LMD +E
Sbjct: 597 TAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNI 656
Query: 109 -----------------------KGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
GL PN TY L L L+ M G
Sbjct: 657 MIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNG 716
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGK----- 200
C ++ F+V+ ++ ++ A + + EK F + + DLL GK
Sbjct: 717 CTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSG-GKYQEYY 775
Query: 201 --LVEAEKSFLE 210
L E KSF+E
Sbjct: 776 RFLPEKYKSFIE 787
>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
Length = 722
Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 125/251 (49%), Gaps = 2/251 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G +P++++Y LID +CK+ ++E+A ++++M + ++ + + Y +I L +
Sbjct: 415 MQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEK 474
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A ++ +M GC PD +N+ I C + +A GL +M+ +G+ N TYN
Sbjct: 475 VQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNT 534
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F ++ + L M+ GC + + L+K R +E L L+ DM+ KG
Sbjct: 535 LIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKG 594
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
+ ++L + LC G + A + +MI +G P V++ I L + QEAL
Sbjct: 595 LNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEAL 654
Query: 240 QNLSNKMALFG 250
NL +K+ + G
Sbjct: 655 -NLFDKLQVEG 664
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 118/243 (48%), Gaps = 1/243 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G PDI +YN LI CK + A +++ +M+ + P+VI+YT +I G+
Sbjct: 380 MLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGR 439
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++AR+VL EM G +A YN I C ++++DA + +M KG P+ T+N
Sbjct: 440 LEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNS 499
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
N + LY M+ G + NT + L+ R+ ++ AL+L NDM+ +G
Sbjct: 500 LIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRG 559
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEAL 239
+ + L LC G + + F +M+ KG P+ +S I L N Q AL
Sbjct: 560 CPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHAL 619
Query: 240 QNL 242
+ L
Sbjct: 620 EFL 622
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 119/244 (48%), Gaps = 4/244 (1%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIV-EKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
P++V +N LI+ Y ++++A ++ E M PD+ +Y ++I GL G AR
Sbjct: 350 NPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSAR 409
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+++ EM+ GC P+ Y I +C RL +A ++DEM KGL+ NA YN
Sbjct: 410 ELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISAL 469
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEKGFGSY 184
++ + N++ M GC P+ + L+ LCK K E AL L+ DM+ +G +
Sbjct: 470 CKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCK-VNKFEEALGLYQDMLLEGVIAN 528
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLS 243
+ + L G + EA K +M+ +G +++ IKAL N ++ L
Sbjct: 529 TITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFE 588
Query: 244 NKMA 247
+ M+
Sbjct: 589 DMMS 592
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 108/226 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ + V YNCLI CKD +V+ A + M + PD+ ++ S+I GL V +
Sbjct: 450 MSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNK 509
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A + ++M G + YN I + +++A L+++M+ +G + TYN
Sbjct: 510 FEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNG 569
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + ++ L+ MM G PN SC L+ R ++ AL+ DM+ +G
Sbjct: 570 LIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRG 629
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
I+ + L + LC G+ EA F ++ +G P +++ +
Sbjct: 630 LTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTL 675
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 112/247 (45%), Gaps = 5/247 (2%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PD+ ++N I CK ++ +A K+V++M +P+ +Y ++ GL +G+ D+A
Sbjct: 282 GCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEA 341
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDE-MVEKGLSPNATTYNLFFR 123
R +L ++ P+ +N I Y RL +A +M E M+ G P+ TYN
Sbjct: 342 RMLLNKVPN----PNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLIL 397
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
L S+ L M GC PN + L+ ++ ++E A + ++M KG
Sbjct: 398 GLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLAL 457
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLS 243
+ + L LC K+ +A F +M KG KP +F + + NK E L
Sbjct: 458 NAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLY 517
Query: 244 NKMALFG 250
M L G
Sbjct: 518 QDMLLEG 524
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 118/274 (43%), Gaps = 35/274 (12%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ P + ++ ++ C +V+ A +++ M P+ I Y ++I L VG+
Sbjct: 208 MLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGR 267
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++ +L+EM GC PD +N AI C R+ +A+ L+D M+ +G +PN+ TY +
Sbjct: 268 VNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGV 327
Query: 121 FFRVF---------------------YWSNDLRSSW-----------NLYCRMMGTGCLP 148
N L + + ++ M+ GC P
Sbjct: 328 LMHGLCRMGKVDEARMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGP 387
Query: 149 NTQSC-MFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKS 207
+ + ++ LCK+ V A +L N+M KG ++ +L D C G+L EA
Sbjct: 388 DIFTYNTLILGLCKKGYLVS-ARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNV 446
Query: 208 FLEMIEKGHKPSQVSFR-RIKALMELANKQEALQ 240
EM KG + V + I AL + Q+AL
Sbjct: 447 LDEMSGKGLALNAVGYNCLISALCKDEKVQDALN 480
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 101/224 (45%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G KPDI ++N LI CK + E+A + + M E + + I+Y ++I G
Sbjct: 485 MSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGA 544
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++ +M GC D YN I+ C A + L ++M+ KGL+PN + N+
Sbjct: 545 MQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNI 604
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+ +++ + M+ G P+ + L+ LCK E AL L++ + +
Sbjct: 605 LINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQE-ALNLFDKLQVE 663
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G + + L C G +A ++ G P++V++
Sbjct: 664 GICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTW 707
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 64/130 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ P+ +S N LI+ C+ ++ A + + M ++PD+++Y S+I GL G+
Sbjct: 590 MMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGR 649
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++ +++ G PDA YN I +C DA L+ V+ G PN T+ +
Sbjct: 650 AQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYI 709
Query: 121 FFRVFYWSND 130
F D
Sbjct: 710 LVSNFIKEGD 719
Score = 37.7 bits (86), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 87/207 (42%), Gaps = 7/207 (3%)
Query: 48 YTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMV 107
Y +I LG G+ +L +MK+ G + + +++Y A A+ L+ +M
Sbjct: 114 YYMLIDKLGAAGEFKTIDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDM- 172
Query: 108 EKGL---SPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQE 164
+G+ P +YN+ V N + N++ M+ G P + ++K
Sbjct: 173 -RGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVN 231
Query: 165 KVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
+V+ A L DM G +V L L +G++ E K EM+ G P +F
Sbjct: 232 EVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFN 291
Query: 225 -RIKALMELANKQEALQNLSNKMALFG 250
I L ++ EA + L ++M L G
Sbjct: 292 DAIHGLCKMLRIHEAAK-LVDRMLLRG 317
>gi|356519580|ref|XP_003528450.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Glycine max]
Length = 1012
Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 123/252 (48%), Gaps = 12/252 (4%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
+MG+ + + YN LI V C+ +KA ++ +M + IS D+++Y ++I G +
Sbjct: 683 DMGLNLNQMVYNTLITVLCRLGMTKKANVVLTEMVIKGISADIVTYNALIRGYCTGSHVE 742
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
KA + +M G P+ YNA + +RDA L+ EM E+GL PNATTYN+
Sbjct: 743 KAFNTYSQMLVSGISPNITTYNALLEGLSTNGLMRDADKLVSEMRERGLVPNATTYNILV 802
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
+ R S LYC M+ G +P T + L++ + K+ A +L N+M+ +G
Sbjct: 803 SGHGRVGNKRDSIKLYCEMITKGFIPTTGTYNVLIQDYAKAGKMRQARELLNEMLTRGRI 862
Query: 183 SYILVSDVLFDLLC------DMGKLV------EAEKSFLEMIEKGHKPSQVSFRRIKALM 230
DVL C +M +L+ EA+K EM EKGH PS+ + I +
Sbjct: 863 PNSSTYDVLICGWCKLSCQPEMDRLLKLSYQNEAKKLLREMCEKGHVPSESTLMYISSNF 922
Query: 231 ELANKQEALQNL 242
K++ + L
Sbjct: 923 SAPGKRDDAKRL 934
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 102/223 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G P + + L+ Y + R+ + +I +K+ D ++ + + Y ++I L +G
Sbjct: 646 MLAVGYVPTPIIHKFLLKAYSRSRKADAILQIHKKLVDMGLNLNQMVYNTLITVLCRLGM 705
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA VL EM G D YNA IR YC + A +M+ G+SPN TTYN
Sbjct: 706 TKKANVVLTEMVIKGISADIVTYNALIRGYCTGSHVEKAFNTYSQMLVSGISPNITTYNA 765
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ +R + L M G +PN + LV R +++L+ +M+ KG
Sbjct: 766 LLEGLSTNGLMRDADKLVSEMRERGLVPNATTYNILVSGHGRVGNKRDSIKLYCEMITKG 825
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
F +VL GK+ +A + EM+ +G P+ ++
Sbjct: 826 FIPTTGTYNVLIQDYAKAGKMRQARELLNEMLTRGRIPNSSTY 868
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 109/244 (44%), Gaps = 23/244 (9%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKM----RDE-----------------DISP 43
GVKPDIV+YN L++ +CK + KA +V ++ RD+ D+ P
Sbjct: 175 GVKPDIVTYNTLVNAFCKRGDLAKAESVVNEILGFRRDDESGVLNDCGVETWDGLRDLQP 234
Query: 44 DVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLM 103
V+++T++I D + ++M G PD ++ + C +L +A+ L+
Sbjct: 235 TVVTWTTLIAAYCKHRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLL 294
Query: 104 DEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQ 163
EM GL PN +Y S + ++N +M+ G + C ++ +
Sbjct: 295 REMYNMGLDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKA 354
Query: 164 EKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHK-PSQVS 222
K + A +++ +++ + L D C +G VE ++ L+ +EK H P+ V+
Sbjct: 355 GKSKEAEEMFQTILKLNLVPNCVTYTALLDGHCKVGD-VEFAETVLQKMEKEHVLPNVVT 413
Query: 223 FRRI 226
F I
Sbjct: 414 FSSI 417
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 102/231 (44%), Gaps = 4/231 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E ++ D+V+YN L + + E + +M + ++PD ++Y S++ + G+
Sbjct: 542 MTEKDMQFDVVAYNALTKGLLRLGKYEPK-SVFSRMIELGLTPDCVTYNSVMNTYFIQGK 600
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A D+L EMK YG P+ YN I C + ++ EM+ G P +
Sbjct: 601 TENALDLLNEMKSYGVMPNMVTYNILIGGLCKTGAIEKVISVLHEMLAVGYVPTPIIHKF 660
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + S + ++ +++ G N L+ + R + A + +MV KG
Sbjct: 661 LLKAYSRSRKADAILQIHKKLVDMGLNLNQMVYNTLITVLCRLGMTKKANVVLTEMVIKG 720
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALME 231
+ I+ + L C + +A ++ +M+ G P+ ++ AL+E
Sbjct: 721 ISADIVTYNALIRGYCTGSHVEKAFNTYSQMLVSGISPNITTY---NALLE 768
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/287 (19%), Positives = 121/287 (42%), Gaps = 34/287 (11%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + V P++V+++ +I+ Y K + KA +++ KM +I P+V Y ++ G GQ
Sbjct: 402 MEKEHVLPNVVTFSSIINGYAKKGMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQ 461
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A KEMK +G + ++ + N + +++A L+ +++ KG+ + Y+
Sbjct: 462 HEAAAGFYKEMKSWGLEENNIIFDILLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSS 521
Query: 121 FFRVFYWSNDLRSSWNL----------------------------------YCRMMGTGC 146
++ + ++ ++ + RM+ G
Sbjct: 522 LMDGYFKEGNESAALSVVQEMTEKDMQFDVVAYNALTKGLLRLGKYEPKSVFSRMIELGL 581
Query: 147 LPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEK 206
P+ + ++ Q K E AL L N+M G ++ ++L LC G + +
Sbjct: 582 TPDCVTYNSVMNTYFIQGKTENALDLLNEMKSYGVMPNMVTYNILIGGLCKTGAIEKVIS 641
Query: 207 SFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFGPSM 253
EM+ G+ P+ + + + + K +A+ + K+ G ++
Sbjct: 642 VLHEMLAVGYVPTPIIHKFLLKAYSRSRKADAILQIHKKLVDMGLNL 688
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 97/215 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M MG+ P+ VSY +I K +V +A+ +M IS D++ T+++ GL G+
Sbjct: 297 MYNMGLDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKAGK 356
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++ + + + P+ Y A + +C + A ++ +M ++ + PN T++
Sbjct: 357 SKEAEEMFQTILKLNLVPNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTFSS 416
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L + + +M+ +PN L+ R + E A + +M G
Sbjct: 417 IINGYAKKGMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKSWG 476
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
++ D+L + L G + EA+ +++ KG
Sbjct: 477 LEENNIIFDILLNNLKRSGGMKEAQSLIKDILSKG 511
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 109/267 (40%), Gaps = 23/267 (8%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
D V+YN ++ +CK ++ + ++ +M + + D ++ ++ G +G A ++
Sbjct: 74 DHVTYNTVVWGFCKRGLADQGFGLLSEMVKKGVCFDSVTCNILVKGYCQIGLVQYAEWIM 133
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
+ G DA N + YC + A L+++ + G+ P+ TYN F
Sbjct: 134 GNLVGGGVPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWKNGVKPDIVTYNTLVNAFCKR 193
Query: 129 NDLRSSWNLYCRMMG------TGCL---------------PNTQSCMFLVKLCKRQEKVE 167
DL + ++ ++G +G L P + L+ + ++
Sbjct: 194 GDLAKAESVVNEILGFRRDDESGVLNDCGVETWDGLRDLQPTVVTWTTLIAAYCKHRGID 253
Query: 168 IALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-I 226
L+ M+ G ++ + LC GKL EA EM G P+ VS+ I
Sbjct: 254 DFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLLREMYNMGLDPNHVSYTTII 313
Query: 227 KALMELANKQEALQNLSNKMALFGPSM 253
AL++ EA N ++M + G S+
Sbjct: 314 SALLKSGRVMEAF-NHQSQMVVRGISI 339
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 101/253 (39%), Gaps = 35/253 (13%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
++P +V++ LI YCK R ++ + + E+M + PDV++ +SI+ GL G+ +A
Sbjct: 232 LQPTVVTWTTLIAAYCKHRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAA 291
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLS------------- 112
+L+EM G P+ +Y I + R+ +A +MV +G+S
Sbjct: 292 MLLREMYNMGLDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGL 351
Query: 113 ----------------------PNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNT 150
PN TY D+ + + +M LPN
Sbjct: 352 FKAGKSKEAEEMFQTILKLNLVPNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLPNV 411
Query: 151 QSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLE 210
+ ++ ++ + A+++ MV+ + V +L D G+ A + E
Sbjct: 412 VTFSSIINGYAKKGMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKE 471
Query: 211 MIEKGHKPSQVSF 223
M G + + + F
Sbjct: 472 MKSWGLEENNIIF 484
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 62/129 (48%), Gaps = 12/129 (9%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MRE G+ P+ +YN L+ + + + K+ +M + P +Y +I G+
Sbjct: 786 MRERGLVPNATTYNILVSGHGRVGNKRDSIKLYCEMITKGFIPTTGTYNVLIQDYAKAGK 845
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYC-------IAKRLR-----DASGLMDEMVE 108
+AR++L EM G P+++ Y+ I +C + + L+ +A L+ EM E
Sbjct: 846 MRQARELLNEMLTRGRIPNSSTYDVLICGWCKLSCQPEMDRLLKLSYQNEAKKLLREMCE 905
Query: 109 KGLSPNATT 117
KG P+ +T
Sbjct: 906 KGHVPSEST 914
>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Glycine max]
Length = 852
Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 110/216 (50%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ P + +YN +I ++ +E A + E+M+ + + PD+++Y S+I G G VG A
Sbjct: 246 GLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGA 305
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
V +EMK+ GC PD YN+ I +C +R+ A + M ++GL PN TY+
Sbjct: 306 VSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDA 365
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
F + L + + M+ G PN + L+ + + A +L ++M + G
Sbjct: 366 FCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLN 425
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQ 220
I+ L D LC+ G++ EAE+ F +++ G +Q
Sbjct: 426 IVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQ 461
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 123/286 (43%), Gaps = 37/286 (12%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G++P+ +Y LID CK + +A+K+ +M+ ++ ++++YT+++ GL G+
Sbjct: 382 MIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGR 441
Query: 61 -----------------------------------PDKARDVLKEMKEYGCYPDAAAYNA 85
+KA D+L+EM + PD Y
Sbjct: 442 MREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGT 501
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
I C + D+ ++ EM++ GL+ N+ Y ++ + NL M G
Sbjct: 502 KIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLG 561
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
+ L+ + V+ A++ ++ M G I++ L D LC L EA+
Sbjct: 562 IKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAK 621
Query: 206 KSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLSNKMALFG 250
F EM++KG P ++ + I M+ N EAL +L N+M G
Sbjct: 622 NLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEAL-SLRNRMVEIG 666
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 100/241 (41%), Gaps = 36/241 (14%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + V P + S N L+ K + A + M +SP V +Y +IG L G
Sbjct: 207 MNKFRVLPKVRSCNELLHRLSKSSKGGLALSFFKDMVVAGLSPSVFTYNMVIGCLAREGD 266
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ AR + +EMK G PD YN+ I Y L A + +EM + G P+ TYN
Sbjct: 267 LEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYN- 325
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
S N +C+ E++ A + + M ++G
Sbjct: 326 ------------SLINCFCKF----------------------ERIPQAFEYLHGMKQRG 351
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
++ L D C G L+EA K F++MI G +P++ ++ I A ++ + EA
Sbjct: 352 LQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAF 411
Query: 240 Q 240
+
Sbjct: 412 K 412
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 85/177 (48%), Gaps = 9/177 (5%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G++P+I+ Y LID CK+ +E+A + +M D+ ISPD + YTS+I G G
Sbjct: 592 MTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGN 651
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
P +A + M E G D AY + I + +++ A L+DEM+ KG+ P+
Sbjct: 652 PGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCIC 711
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNT-----QSCMFLV----KLCKRQEKVEI 168
R +Y D+ + L+ M G + T SC+ V KLC Q +
Sbjct: 712 LLRKYYELGDINEALALHDDMARRGLISGTIDITVPSCLTAVTKLHKLCASQSGTDF 768
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 113/251 (45%), Gaps = 2/251 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G +PD+++YN LI+ +CK ++ +A++ + M+ + P+V++Y+++I G
Sbjct: 312 MKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGM 371
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A +M G P+ Y + I C L +A L EM + G++ N TY
Sbjct: 372 LLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTA 431
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+R + L+ ++ G N Q L + + +E A+ + +M +K
Sbjct: 432 LLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKN 491
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP-SQVSFRRIKALMELANKQEAL 239
+L+ LC ++ ++ EM++ G S + I A ++ EA+
Sbjct: 492 LKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAV 551
Query: 240 QNLSNKMALFG 250
NL +M G
Sbjct: 552 -NLLQEMQDLG 561
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 106/248 (42%), Gaps = 2/248 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + +KPD++ Y I C+ ++E + ++ +M D ++ + YT++I VG+
Sbjct: 487 MNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGK 546
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++L+EM++ G Y I C ++ A D M GL PN Y
Sbjct: 547 TTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTA 606
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++ L + NL+ M+ G P+ L+ + AL L N MVE G
Sbjct: 607 LIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIG 666
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQV-SFRRIKALMELANKQEAL 239
+ L G++ A+ EM+ KG P QV ++ EL + EAL
Sbjct: 667 MELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCICLLRKYYELGDINEAL 726
Query: 240 QNLSNKMA 247
L + MA
Sbjct: 727 A-LHDDMA 733
>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 592
Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 112/226 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV+PD+V+Y L+D +C ++++A K+ + M + +P+VISY+++I G + +
Sbjct: 310 MIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQR 369
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA + +EM + P+ YN I C RLRDA L EMV G P+ TY +
Sbjct: 370 IDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRI 429
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L + + + G+ P+ QS ++ R ++E A L++ + KG
Sbjct: 430 LLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKG 489
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ ++ + LC G L EA K F EM G P ++ I
Sbjct: 490 LHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLI 535
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 127/260 (48%), Gaps = 2/260 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + +P++++YN +ID KDRQV +A I +M + ISP+V +Y SII GL +
Sbjct: 205 MVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSE 264
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++ EM + P+ + + C + A ++D M+++G+ P+ TY
Sbjct: 265 WKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTA 324
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+++ + ++ M+ GC PN S L+ + ++++ A+ L+ +M ++
Sbjct: 325 LMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRE 384
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
I+ + L LC +G+L +A F EM+ G P V++R + L L + Q
Sbjct: 385 LVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRIL--LDYLCKTRHLDQ 442
Query: 241 NLSNKMALFGPSMIPKREEY 260
++ A+ G ++ P + Y
Sbjct: 443 AMAMLKAIEGSNLAPDIQSY 462
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 117/247 (47%), Gaps = 6/247 (2%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
++G +PD ++ LI C + ++ +A + +KM E P+ ++Y ++I GL VG
Sbjct: 137 KLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSR 196
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
A +L+ M + C P+ YN I +++ +A + EM+ KG+SPN +TYN
Sbjct: 197 AAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSII 256
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
++ + L M+ + +PN LV ++ V IA + + M+++G
Sbjct: 257 HGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVE 316
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNL 242
++ L D C ++ EA+K F M+ KG P+ +S+ L N +Q +
Sbjct: 317 PDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYS------TLINGYCKIQRI 370
Query: 243 SNKMALF 249
M LF
Sbjct: 371 DKAMYLF 377
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 90/178 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD+V+Y L+D CK R +++A +++ + +++PD+ SY +I G+ VG+
Sbjct: 415 MVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGE 474
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A D+ + G +PD Y I C+ L +A+ L EM G SP+ TYNL
Sbjct: 475 LEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNL 534
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
R F +N+ S+ L M+G G + + +V++ + Q+ ++ V+
Sbjct: 535 ITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVEMLSDDGLDQSVKQILHEFVQ 592
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 92/226 (40%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M M P +V + ++ + + ++M I DV + +I + +
Sbjct: 65 MLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAIVINSFCHLNR 124
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D VL ++ + G PD A + IR C+ ++ +A L D+MV +G PN TY
Sbjct: 125 VDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGT 184
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ R++ L M+ C PN + ++ + +V AL ++++M+ KG
Sbjct: 185 LIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKG 244
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + + LC + EM++ P+ V F +
Sbjct: 245 ISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTL 290
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 84/202 (41%), Gaps = 2/202 (0%)
Query: 26 VEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNA 85
+++A +M P V+ + I+ + + + K+M G D
Sbjct: 55 IDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAI 114
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
I ++C R+ ++ ++ + G P+ T+ R + + +L+ +M+G G
Sbjct: 115 VINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEG 174
Query: 146 CLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEA 204
PN + L+ LCK A++L MV+K ++ + + D L ++ EA
Sbjct: 175 FQPNGVTYGTLIHGLCKVGNS-RAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEA 233
Query: 205 EKSFLEMIEKGHKPSQVSFRRI 226
F EMI KG P+ ++ I
Sbjct: 234 LNIFSEMIAKGISPNVSTYNSI 255
Score = 40.4 bits (93), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 38/187 (20%), Positives = 73/187 (39%), Gaps = 1/187 (0%)
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
D+A M P + + + K L +M G+ + T +
Sbjct: 56 DEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAIV 115
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
F N + +++ ++ G P+T + L++ + K+ AL L++ MV +GF
Sbjct: 116 INSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGF 175
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQ 240
+ L LC +G A + M++K +P+ +++ I L + EAL
Sbjct: 176 QPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALN 235
Query: 241 NLSNKMA 247
S +A
Sbjct: 236 IFSEMIA 242
>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 740
Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 125/251 (49%), Gaps = 2/251 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G +P++++Y LID +CK+ ++E+A ++++M + ++ + + Y +I L +
Sbjct: 433 MQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEK 492
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A ++ +M GC PD +N+ I C + +A GL +M+ +G+ N TYN
Sbjct: 493 VQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNT 552
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F ++ + L M+ GC + + L+K R +E L L+ DM+ KG
Sbjct: 553 LIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKG 612
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
+ ++L + LC G + A + +MI +G P V++ I L + QEAL
Sbjct: 613 LNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEAL 672
Query: 240 QNLSNKMALFG 250
NL +K+ + G
Sbjct: 673 -NLFDKLQVEG 682
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 119/245 (48%), Gaps = 1/245 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G PDI +YN LI CK + A +++ +M+ + P+VI+YT +I G+
Sbjct: 398 MLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGR 457
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++AR+VL EM G +A YN I C ++++DA + +M KG P+ T+N
Sbjct: 458 LEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNS 517
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
N + LY M+ G + NT + L+ R+ ++ AL+L NDM+ +G
Sbjct: 518 LIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRG 577
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEAL 239
+ + L LC G + + F +M+ KG P+ +S I L N Q AL
Sbjct: 578 CPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHAL 637
Query: 240 QNLSN 244
+ L +
Sbjct: 638 EFLRD 642
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 119/244 (48%), Gaps = 4/244 (1%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIV-EKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
P++V +N LI+ Y ++++A ++ E M PD+ +Y ++I GL G AR
Sbjct: 368 NPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSAR 427
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+++ EM+ GC P+ Y I +C RL +A ++DEM KGL+ NA YN
Sbjct: 428 ELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISAL 487
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEKGFGSY 184
++ + N++ M GC P+ + L+ LCK K E AL L+ DM+ +G +
Sbjct: 488 CKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCK-VNKFEEALGLYQDMLLEGVIAN 546
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLS 243
+ + L G + EA K +M+ +G +++ IKAL N ++ L
Sbjct: 547 TITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFE 606
Query: 244 NKMA 247
+ M+
Sbjct: 607 DMMS 610
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 108/226 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ + V YNCLI CKD +V+ A + M + PD+ ++ S+I GL V +
Sbjct: 468 MSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNK 527
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A + ++M G + YN I + +++A L+++M+ +G + TYN
Sbjct: 528 FEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNG 587
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + ++ L+ MM G PN SC L+ R ++ AL+ DM+ +G
Sbjct: 588 LIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRG 647
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
I+ + L + LC G+ EA F ++ +G P +++ +
Sbjct: 648 LTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTL 693
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 112/247 (45%), Gaps = 5/247 (2%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PD+ ++N I CK ++ +A K+V++M +P+ +Y ++ GL +G+ D+A
Sbjct: 300 GCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEA 359
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDE-MVEKGLSPNATTYNLFFR 123
R +L ++ P+ +N I Y RL +A +M E M+ G P+ TYN
Sbjct: 360 RMLLNKVPN----PNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLIL 415
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
L S+ L M GC PN + L+ ++ ++E A + ++M KG
Sbjct: 416 GLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLAL 475
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLS 243
+ + L LC K+ +A F +M KG KP +F + + NK E L
Sbjct: 476 NAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLY 535
Query: 244 NKMALFG 250
M L G
Sbjct: 536 QDMLLEG 542
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 118/274 (43%), Gaps = 35/274 (12%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ P + ++ ++ C +V+ A +++ M P+ I Y ++I L VG+
Sbjct: 226 MLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGR 285
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++ +L+EM GC PD +N AI C R+ +A+ L+D M+ +G +PN+ TY +
Sbjct: 286 VNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGV 345
Query: 121 FFRVF---------------------YWSNDLRSSW-----------NLYCRMMGTGCLP 148
N L + + ++ M+ GC P
Sbjct: 346 LMHGLCRMGKVDEARMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGP 405
Query: 149 NTQSC-MFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKS 207
+ + ++ LCK+ V A +L N+M KG ++ +L D C G+L EA
Sbjct: 406 DIFTYNTLILGLCKKGYLVS-ARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNV 464
Query: 208 FLEMIEKGHKPSQVSFR-RIKALMELANKQEALQ 240
EM KG + V + I AL + Q+AL
Sbjct: 465 LDEMSGKGLALNAVGYNCLISALCKDEKVQDALN 498
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 101/224 (45%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G KPDI ++N LI CK + E+A + + M E + + I+Y ++I G
Sbjct: 503 MSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGA 562
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++ +M GC D YN I+ C A + L ++M+ KGL+PN + N+
Sbjct: 563 MQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNI 622
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+ +++ + M+ G P+ + L+ LCK E AL L++ + +
Sbjct: 623 LINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQE-ALNLFDKLQVE 681
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G + + L C G +A ++ G P++V++
Sbjct: 682 GICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTW 725
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 64/130 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ P+ +S N LI+ C+ ++ A + + M ++PD+++Y S+I GL G+
Sbjct: 608 MMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGR 667
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++ +++ G PDA YN I +C DA L+ V+ G PN T+ +
Sbjct: 668 AQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYI 727
Query: 121 FFRVFYWSND 130
F D
Sbjct: 728 LVSNFIKEGD 737
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 87/207 (42%), Gaps = 7/207 (3%)
Query: 48 YTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMV 107
Y +I LG G+ +L +MK+ G + + +++Y A A+ L+ +M
Sbjct: 132 YYMLIDKLGAAGEFKTTDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDM- 190
Query: 108 EKGL---SPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQE 164
+G+ P +YN+ V N + N++ M+ G P + ++K
Sbjct: 191 -RGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVN 249
Query: 165 KVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
+V+ A L DM G +V L L +G++ E K EM+ G P +F
Sbjct: 250 EVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFN 309
Query: 225 -RIKALMELANKQEALQNLSNKMALFG 250
I L ++ EA + L ++M L G
Sbjct: 310 DAIHGLCKMLRIHEAAK-LVDRMLLRG 335
>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Brachypodium distachyon]
Length = 718
Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 112/226 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G P++V+YN L+ +C+ +V+ A ++V MR+ + P ++++ +++ GL G+
Sbjct: 181 MRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGR 240
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ AR + EM G PD +YN + YC A L +A + EM +KG+ P+ T+
Sbjct: 241 MEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTS 300
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ +L + L +M G N + L+ R ++ AL +M E
Sbjct: 301 LIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECR 360
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ +VL + C +G++ EA + EM KG KP V++ I
Sbjct: 361 IQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTI 406
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 127/265 (47%), Gaps = 4/265 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV PD+V++ LI C+ +E+A +V +MR+ + + ++T++I G G
Sbjct: 286 MAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGF 345
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A +KEM+E P YN I YC R+ +A L+ EM KG+ P+ TY+
Sbjct: 346 LDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYST 405
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ D S++ L +M+ G +P+ + L++ + ++ A +L+ M++ G
Sbjct: 406 ILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLG 465
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEAL 239
L D C G + +A EMI+KG P V++ I L + A +EA
Sbjct: 466 LQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEA- 524
Query: 240 QNLSNKMALFGPSMIPKREEYLAEM 264
Q L K+ P +P +Y A M
Sbjct: 525 QRLLFKLYYEDP--VPDNIKYEALM 547
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 103/220 (46%), Gaps = 1/220 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIV-EKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
GV P++ +YN L+ C Q E+A +V + MR +P+V++Y +++ G+ D
Sbjct: 149 GVAPNVYTYNILVRALCARGQREEALGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDA 208
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
A ++ M+E G P +N + C A R+ DA + DEM +GL+P+ +YN
Sbjct: 209 AERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVS 268
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
+ + L + ++ M G +P+ + L+ R +E A+ L M E+G
Sbjct: 269 GYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRM 328
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
L D C G L +A + EM E +PS V +
Sbjct: 329 NEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCY 368
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 121/263 (46%), Gaps = 19/263 (7%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+KPD+V+Y+ ++ YCK + A+++ KM + + PD I+Y+S+I GL +
Sbjct: 391 MEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERR 450
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A ++ ++M + G PD Y I +C ++ A L DEM++KG+ P+ TY++
Sbjct: 451 LGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSV 510
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQE-KVEIAL--------- 170
S + + L ++ +P+ L+ C+ E K +AL
Sbjct: 511 LIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGL 570
Query: 171 -----QLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS-FR 224
+++ M+++ + V VL C G +++A +++ G P+ S
Sbjct: 571 MNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRCGFSPNSTSTIS 630
Query: 225 RIKALMELANKQEA---LQNLSN 244
++ L E EA +Q L N
Sbjct: 631 LVRGLFEEGMTVEADNVIQELLN 653
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 92/200 (46%), Gaps = 3/200 (1%)
Query: 42 SPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASG 101
+P +++Y +++ L P AR +L M G P+ YN +R C + +A G
Sbjct: 117 APSLLAYNAVLLALSDASLP-SARRLLASMLRDGVAPNVYTYNILVRALCARGQREEALG 175
Query: 102 LM-DEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLC 160
++ D+M G +PN TYN F + ++ ++ L M G P+ + +V
Sbjct: 176 VVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGL 235
Query: 161 KRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQ 220
+ ++E A +++++M +G + + L C G L EA F EM +KG P
Sbjct: 236 CKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDV 295
Query: 221 VSFRR-IKALMELANKQEAL 239
V+F I A+ N + A+
Sbjct: 296 VTFTSLIHAMCRAGNLERAV 315
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 63/139 (45%), Gaps = 2/139 (1%)
Query: 110 GLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEI 168
G +P+ YN ++ L S+ L M+ G PN + LV+ LC R ++ E
Sbjct: 115 GYAPSLLAYNAVLLALSDAS-LPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEA 173
Query: 169 ALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKA 228
+ +DM G ++ + L C G++ AE+ M E G +PS V+F +
Sbjct: 174 LGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVN 233
Query: 229 LMELANKQEALQNLSNKMA 247
+ A + E + + ++MA
Sbjct: 234 GLCKAGRMEDARKMFDEMA 252
>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 988
Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 94/179 (52%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G PD+++YN LI+ CK + A ++V+KMR E I PD ++YTSII + G
Sbjct: 478 MKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGL 537
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA +V +M + G +P Y I +Y + RL A DEM +KG+SPN TYN
Sbjct: 538 LRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNA 597
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
N + ++NL+ M G PN + L+ + + AL+L+ DM+++
Sbjct: 598 LIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDR 656
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 108/223 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ PD+V++ L+ +C+ + A ++ ++M + PD I+YT+ I G +G
Sbjct: 408 MIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGN 467
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
P KA + +EMK G PD YN I C DA+ L+ +M +G+ P+ TY
Sbjct: 468 PSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTS 527
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
S LR + ++ M+ G P+ + L+ + +++ A + +++M +KG
Sbjct: 528 IIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKG 587
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + L LC + A F EM KG P++ ++
Sbjct: 588 VSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTY 630
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 126/270 (46%), Gaps = 36/270 (13%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
++P IV++N ++D CK+ +V +A ++++ MR P+ +SY ++ GL G+ D+A+
Sbjct: 203 IRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAK 262
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF--- 122
+++++M G A YN IR +C + +A+ L EM+ +G P TYN
Sbjct: 263 ELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSL 322
Query: 123 -RVFYWSNDLR--------------SSWN-----------------LYCRMMGTGCLPNT 150
R+ S+ R S+N L+ + +P+
Sbjct: 323 CRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSV 382
Query: 151 QSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLE 210
+ L+ R ++IA + +DM++ G ++ +L C MG L A++ F E
Sbjct: 383 VTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDE 442
Query: 211 MIEKGHKPSQVSF-RRIKALMELANKQEAL 239
M+ +G KP +++ RI ++L N +A
Sbjct: 443 MLSRGLKPDCIAYTTRIVGELKLGNPSKAF 472
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 104/223 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+R + P +V+YN LID C+ ++ A + + M + PDV+++T ++ G +G
Sbjct: 373 LRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGN 432
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A+++ EM G PD AY I A G+ +EM +G P+ TYN+
Sbjct: 433 LPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNV 492
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + L +M G +P+ + ++ + A ++++DM++KG
Sbjct: 493 LINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKG 552
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ VL G+L A+K F EM +KG P+ +++
Sbjct: 553 IHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITY 595
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 104/227 (45%), Gaps = 10/227 (4%)
Query: 5 GVKPDIVSYNCLIDVYCKDR----QVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
G+ PD+ + N ++ + KD+ +VE+ Y ++ K + I P ++++ +++ G+
Sbjct: 167 GLLPDVRNCNRVLKL-LKDKSMVNEVEEVYSVMIKCQ---IRPTIVTFNTMMDSRCKEGE 222
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A +VL M+ +GC P+ +YN + A L+++M GL +A TYN
Sbjct: 223 VGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNP 282
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSC-MFLVKLCKRQEKVEIALQLWNDMVEK 179
R F + +L M+G G LP + + LC R +V A + + MV +
Sbjct: 283 LIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLC-RLGRVSDARRYLDVMVNE 341
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ + L +G EA F E+ K PS V++ +
Sbjct: 342 DLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTL 388
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 94/227 (41%), Gaps = 1/227 (0%)
Query: 14 NCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKE 73
+ LI V+ K +EK + KM + + PDV + ++ L ++ +V M +
Sbjct: 141 DLLIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKSMVNEVEEVYSVMIK 200
Query: 74 YGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRS 133
P +N + + C + A ++D M G PN +YN+ +
Sbjct: 201 CQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDR 260
Query: 134 SWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFD 193
+ L +M G + + L++ ++E E A L +M+ +G ++ + +
Sbjct: 261 AKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMY 320
Query: 194 LLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
LC +G++ +A + M+ + P VS+ I L N EAL
Sbjct: 321 SLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEAL 367
>gi|297848938|ref|XP_002892350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338192|gb|EFH68609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 493
Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 119/224 (53%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M MG+ PD+++++ +IDV+ K+ Q+ +A K ++M + P++++Y S+I GL + G
Sbjct: 239 MMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGL 298
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A+ VL M G +P+A YN + YC +KR+ DA ++ M G+ + TYN
Sbjct: 299 LDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNT 358
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSC-MFLVKLCKRQEKVEIALQLWNDMVEK 179
++ + + ++ + RM+ G LP+ + M L LC+ K+E AL D+ +
Sbjct: 359 LYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCE-HGKIEKALVKLEDLQKS 417
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I+ +++ +C K+ +A F + KG P +++
Sbjct: 418 ETVVGIITYNIIIKGMCKANKVEDAWYLFCSLALKGVSPDVITY 461
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 117/252 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +MG++PD+++YN LI + + +I+ M I PDVI+++++I G GQ
Sbjct: 204 MEKMGIRPDVITYNSLITRLFHSGKWGVSARILSDMMRMGIHPDVITFSAMIDVFGKEGQ 263
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A+ EM + P+ YN+ I CI L +A +++ MV KG PNA TYN
Sbjct: 264 LLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNT 323
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ S + + + C M G +T + L + + + A ++ MV G
Sbjct: 324 LVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQFNAAEKVLARMVSCG 383
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
I ++L D LC+ GK+ +A ++ + +++ I M ANK E
Sbjct: 384 VLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGIITYNIIIKGMCKANKVEDAW 443
Query: 241 NLSNKMALFGPS 252
L +AL G S
Sbjct: 444 YLFCSLALKGVS 455
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 110/223 (49%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
+G+ D+ S++ LID +C+ ++ A + KM P ++++ S++ G V + +
Sbjct: 102 LGISHDLYSFSTLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQE 161
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
A ++ ++ G P+ YN I + C +++ A +++ M + G+ P+ TYN
Sbjct: 162 AMSLVDQIVGLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLIT 221
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
+ S S + MM G P+ + ++ + ++ ++ A + +++M+++
Sbjct: 222 RLFHSGKWGVSARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDP 281
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
I+ + L + LC G L EA+K M+ KG P+ V++ +
Sbjct: 282 NIVTYNSLINGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTL 324
Score = 40.4 bits (93), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 31/46 (67%)
Query: 10 IVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGL 55
I++YN +I CK +VE A+ + + + +SPDVI+YT+++ GL
Sbjct: 423 IITYNIIIKGMCKANKVEDAWYLFCSLALKGVSPDVITYTTMMIGL 468
>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
Length = 728
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 111/226 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + + PD+V+YN LI+ + E+ +K++E+M + P+ ++Y ++ G+
Sbjct: 328 MENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGK 387
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+ +++M+E GC PD YN I +C ++ +A LMDEM KGL + T N
Sbjct: 388 MDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNT 447
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
R L + +L C G + S L+ + EK AL+LW++M EK
Sbjct: 448 MLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKE 507
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
I+ + + LC MGK +A E++E G P ++++ I
Sbjct: 508 IIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTI 553
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 112/238 (47%), Gaps = 10/238 (4%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
R G D VSY LI Y K + +A ++ ++M++++I P +I+Y S+I GL +G+
Sbjct: 469 RRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKT 528
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
++A D L E+ E G PD YN I YC ++ A ++MVEK P+ T N
Sbjct: 529 NQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTL 588
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKG 180
L + L+ + G + S ++ LCK + E A L +M EK
Sbjct: 589 LCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGE-AFDLLEEMEEKK 647
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEA 238
G + + L D G++ +AE+ ++ EKG +Q +EL +Q+A
Sbjct: 648 LGPDCYTYNAILGGLTDAGRMKDAEEFISKIAEKGKSENQ--------FLELGKRQDA 697
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 109/224 (48%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
++GVK + S+N LI C + + +A +++ KMRD PD I+Y +I+ GL G+ +
Sbjct: 190 KIGVKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLN 249
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
+ARD+L +MK G +P+ +N + C L++A+ +++ M + + P+A TYN+
Sbjct: 250 EARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMI 309
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
F + + L M P+ + L+ C E +L +M +G
Sbjct: 310 SGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMK 369
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ +V+ GK+ E +K+ +M E G P V++ +
Sbjct: 370 PNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTL 413
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 107/223 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G PD ++YN ++D CK ++ +A ++ M+++ + P+ ++ ++ G +G
Sbjct: 223 MRDYGCPPDNITYNTILDGLCKKGRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGW 282
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A +V++ M + PDA YN I +C R+ +A L +EM LSP+ TYN
Sbjct: 283 LKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNT 342
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + L M G G PN+ + +VK ++ K++ + M E G
Sbjct: 343 LINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESG 402
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I+ + L C +GK+ EA + EM KG K V+
Sbjct: 403 CLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTL 445
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 110/261 (42%), Gaps = 35/261 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+KP+ V+YN ++ + K ++++ K V KM + PD+++Y ++I VG+
Sbjct: 363 MEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGK 422
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLM----------------- 103
D+A ++ EM G D N +R C ++L +A L+
Sbjct: 423 MDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGT 482
Query: 104 ------------------DEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
DEM EK + P+ TYN + + ++ +G
Sbjct: 483 LIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESG 542
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
+P+ + ++ ++ +VE A Q N MVEK F ++ + L LC G L +A
Sbjct: 543 LVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKAL 602
Query: 206 KSFLEMIEKGHKPSQVSFRRI 226
K F I KG VS+ I
Sbjct: 603 KLFNTWISKGKDVDAVSYNTI 623
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 115/253 (45%), Gaps = 2/253 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+K D V+ N ++ C++R++++A+ ++ R D +SY ++I G +
Sbjct: 433 MGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEK 492
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + EMKE P YN+ I C + A +DE++E GL P+ TYN
Sbjct: 493 ASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNT 552
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSC-MFLVKLCKRQEKVEIALQLWNDMVEK 179
+ + ++ + +M+ P+ +C L LCK + +E AL+L+N + K
Sbjct: 553 IIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCK-EGMLEKALKLFNTWISK 611
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
G + + + LC + EA EM EK P ++ I + A + +
Sbjct: 612 GKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDA 671
Query: 240 QNLSNKMALFGPS 252
+ +K+A G S
Sbjct: 672 EEFISKIAEKGKS 684
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 60/114 (52%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E KPD+V+ N L+ CK+ +EKA K+ + D +SY +II L +
Sbjct: 573 MVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKR 632
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPN 114
+A D+L+EM+E PD YNA + A R++DA + ++ EKG S N
Sbjct: 633 FGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDAEEFISKIAEKGKSEN 686
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 23/117 (19%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G D VSYN +I CK+++ +A+ ++E+M ++ + PD +Y +I+GGL G+ A
Sbjct: 612 GKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDA 671
Query: 65 RDVLKEMKEYG-----------------------CYPDAAAYNAAIRNYCIAKRLRD 98
+ + ++ E G +P+A AY+ I C R +D
Sbjct: 672 EEFISKIAEKGKSENQFLELGKRQDARTSEIPQEPHPNAIAYSNKINELCSQGRYKD 728
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/228 (19%), Positives = 86/228 (37%), Gaps = 4/228 (1%)
Query: 17 IDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR---DVLKEMKE 73
I Y + +A +I +M+ + P +++ +++ L R V + +
Sbjct: 131 IGAYVACGRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTDFIK 190
Query: 74 YGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRS 133
G + ++N I C+ R +A ++ +M + G P+ TYN L
Sbjct: 191 IGVKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNE 250
Query: 134 SWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFD 193
+ +L M G PN + LV C R ++ A + M + +V+
Sbjct: 251 ARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMIS 310
Query: 194 LLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQ 240
C G++ EA + EM P V++ I E + +E +
Sbjct: 311 GFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFK 358
>gi|357498969|ref|XP_003619773.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494788|gb|AES75991.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 452
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 130/264 (49%), Gaps = 3/264 (1%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+KPDI ++N L+D CK+ +++KA ++ M + + PDVI+Y S++ G LV Q +KA
Sbjct: 185 IKPDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKAT 244
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
V M G PD +Y+ I C K + +A L+ EM K ++PN TY+
Sbjct: 245 FVFNTMARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGL 304
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ S + +W+L M G + + L+ + +V+ A+ L + ++G I
Sbjct: 305 HKSGRIFDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPDI 364
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNK 245
+L D LC G+L +A++ + ++ KG+ + + + L ++ + ++ +
Sbjct: 365 YTYTILVDGLCKNGRLKDAQEVYQILLIKGYHLDSLFDKALSLLSKMEDNGCTPNPVTFE 424
Query: 246 M---ALFGPSMIPKREEYLAEMSA 266
+ ALF M K E L EM A
Sbjct: 425 ILIRALFENDMNDKAVELLREMIA 448
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 97/202 (48%), Gaps = 21/202 (10%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV PD+ SY+ +I+ CK + V++A ++++M + ++P+ ++Y+S+I GL G+
Sbjct: 250 MARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKSGR 309
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN- 119
A D++ EM G D YN+ + C ++ A L+ ++ ++G+ P+ TY
Sbjct: 310 IFDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPDIYTYTI 369
Query: 120 --------------------LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKL 159
L + ++ + + +L +M GC PN + L++
Sbjct: 370 LVDGLCKNGRLKDAQEVYQILLIKGYHLDSLFDKALSLLSKMEDNGCTPNPVTFEILIRA 429
Query: 160 CKRQEKVEIALQLWNDMVEKGF 181
+ + A++L +M+ +G
Sbjct: 430 LFENDMNDKAVELLREMIARGL 451
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 118/249 (47%), Gaps = 17/249 (6%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + V PD+++YN L+D Y +Q KA + M ++PDV SY+ +I GL
Sbjct: 215 MIKQSVDPDVITYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVHSYSVMINGLCKTKM 274
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A ++LKEM P+ Y++ I + R+ DA L++EM +G + TYN
Sbjct: 275 VDEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKSGRIFDAWDLVNEMHNRGQPADVITYNS 334
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
++ + + L ++ G P+ + LV LCK +++ A +++ ++ K
Sbjct: 335 LLDALCKNHQVDKAITLLTKIKDQGIQPDIYTYTILVDGLCK-NGRLKDAQEVYQILLIK 393
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEA 238
G+ D LFD +A +M + G P+ V+F I+AL E +A
Sbjct: 394 GYH-----LDSLFD---------KALSLLSKMEDNGCTPNPVTFEILIRALFENDMNDKA 439
Query: 239 LQNLSNKMA 247
++ L +A
Sbjct: 440 VELLREMIA 448
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 104/222 (46%), Gaps = 2/222 (0%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
V+P++V Y+ +I CKD+ V A+ + +M + ISPDVI+Y +++ G +VG+ +A
Sbjct: 115 VQPNVVMYSTIIYSLCKDKLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAV 174
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+ +M PD +N + C ++ A ++ M+++ + P+ TYN +
Sbjct: 175 GLFNQMLLKNIKPDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGY 234
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + ++ M G P+ S ++ LCK + V+ A+ L +M K
Sbjct: 235 FLVKQENKATFVFNTMARRGVTPDVHSYSVMINGLCKTK-MVDEAVNLLKEMHSKSMAPN 293
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ L D L G++ +A EM +G +++ +
Sbjct: 294 TVTYSSLIDGLHKSGRIFDAWDLVNEMHNRGQPADVITYNSL 335
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 107/266 (40%), Gaps = 43/266 (16%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDED------ISPDVISYTSIIGG 54
M G++ D+V+ N L++ +C QV K+ E + D + +SY ++I G
Sbjct: 34 MELRGIQTDLVNLNILVNCFCHLGQVCLNDKVKETLHFHDDVIAKGFQLNQVSYGTLIDG 93
Query: 55 LGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPN 114
L G+ A VL+ + P+ Y+ I + C K + DA L +M+ K +SP+
Sbjct: 94 LCKAGETRAAMQVLRNIDGLLVQPNVVMYSTIIYSLCKDKLVIDAFDLYSQMLLKRISPD 153
Query: 115 ATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWN 174
TYN GCL + R ++ A+ L+N
Sbjct: 154 VITYNTLMY---------------------GCL-----------IVGRLKE---AVGLFN 178
Query: 175 DMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELAN 234
M+ K I ++L D LC G++ +A MI++ P +++ + L
Sbjct: 179 QMLLKNIKPDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVK 238
Query: 235 KQEALQNLSNKMALFGPSMIPKREEY 260
++ + N MA G + P Y
Sbjct: 239 QENKATFVFNTMARRGVT--PDVHSY 262
>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 774
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 122/247 (49%), Gaps = 2/247 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P++++Y L+D +CK Q+E+A ++ +M + +++ Y ++ L G+
Sbjct: 406 MSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGK 465
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA D+L EM + GC PD +N I C R DA L +M+ G+ N TYN
Sbjct: 466 VPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNT 525
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F ++ + L M+ GC + + L+K + E AL L+++MV K
Sbjct: 526 LIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKD 585
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
+ ++L + LC +GK+ A + +MI +G P V++ I L ++ N +EA
Sbjct: 586 LVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAF 645
Query: 240 QNLSNKM 246
NL NK+
Sbjct: 646 -NLFNKL 651
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 112/226 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G + +I+ YN L+ CK+ +V KA ++ +M D+ PD+ ++ ++I GL V +
Sbjct: 441 MSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDR 500
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A + ++M G + YN I + +++A L+++M+ +G + TYN
Sbjct: 501 KEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNG 560
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ F + L+ M+ +P+ SC L+ R KV AL+L DM+ +G
Sbjct: 561 LIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRG 620
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ + L + LC MG + EA F ++ +G +P +++ +
Sbjct: 621 LAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTL 666
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 122/241 (50%), Gaps = 6/241 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M MG PD+ ++N +I C+ ++ + K+V++M +P+ I+Y ++ GL VG+
Sbjct: 269 MFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGK 328
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLM-DEMVEKGLSPNATTYN 119
D+A+ +L ++ P+ + I Y + RL +A+ + D+M++ G P+ T+N
Sbjct: 329 VDEAQVLLNKVPT----PNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFN 384
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ S+ ++ M GC PN + L+ ++ ++E A + N+M K
Sbjct: 385 TLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAK 444
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEA 238
GF I+ +VL LC GK+ +A EM +KG KP +F I L ++ K++A
Sbjct: 445 GFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDA 504
Query: 239 L 239
L
Sbjct: 505 L 505
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 112/235 (47%), Gaps = 4/235 (1%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIV-EKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
P+ V + LI+ Y K ++++A + +KM PDV ++ ++I GL G A D
Sbjct: 342 PNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVD 401
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
++ +M GC P+ Y + +C +L +A +++EM KG N YN+ R
Sbjct: 402 MVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALC 461
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ + + ++ M GC P+ + L+ LCK K E AL L+ DM+ G +
Sbjct: 462 KNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRK-EDALALYRDMLLDGVIANT 520
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
+ + L G + EA K +M+ +G ++++ IKA +L ++AL
Sbjct: 521 VTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKAL 575
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 15/226 (6%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
+P SYN ++D+ A + +M + + P V ++ ++ L +V + D A
Sbjct: 170 EPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACS 229
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
+L++M ++GC P++ Y I R+ +A L++EM G P+ T+N
Sbjct: 230 LLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLC 289
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
N + L RM+ G PN + L+ R KV+ A L N +
Sbjct: 290 RLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPTP------- 342
Query: 187 VSDVLFDLLCD----MGKLVEAEKSFL--EMIEKGHKPSQVSFRRI 226
+DV F +L + G+L EA +FL +MI+ G +P +F +
Sbjct: 343 -NDVHFTILINGYVKSGRLDEAN-AFLYDKMIKNGCRPDVFTFNTL 386
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 110/236 (46%), Gaps = 3/236 (1%)
Query: 13 YNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMK 72
Y+ LID ++ + K++ ++++E I+ + I+ G P +A +L +MK
Sbjct: 105 YHVLIDKLGAAKEFKVIDKLLLQIKEEGIAFRESLFICIMKYYGRANLPGQATRMLLDMK 164
Query: 73 E-YGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDL 131
Y C P +YN + A A+ + EM+ KG+ P T+ + + N++
Sbjct: 165 GVYCCEPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEV 224
Query: 132 RSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG-FGSYILVSDV 190
++ +L M GC+PN+ L+ ++++V AL+L +M G +DV
Sbjct: 225 DNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDV 284
Query: 191 LFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKM 246
++ LC + ++ E K M+ +G P+ +++ + + K + Q L NK+
Sbjct: 285 IYG-LCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKV 339
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 60/118 (50%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P +S N LI+ C+ +V A +++ M ++PDV++Y S+I GL +G +A ++
Sbjct: 588 PSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNL 647
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+++ G PDA YN I +C A DA L+ VE PN T+ + F
Sbjct: 648 FNKLQAEGIQPDAITYNTLICWHCRAGMFDDAYLLLLRGVENAFIPNDVTWYILVSNF 705
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ PD+V+YN LI+ CK + +A+ + K++ E I PD I+Y ++I G
Sbjct: 616 MIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLICWHCRAGM 675
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNY 90
D A +L E P+ + + N+
Sbjct: 676 FDDAYLLLLRGVENAFIPNDVTWYILVSNF 705
>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
Length = 1088
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 114/246 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G ++V+YN +I YC A +I++ MRD PD SYT +I G + +
Sbjct: 621 MLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISK 680
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A + EM + G P+ Y A I YC ++L A+ L++ M G PN TYN+
Sbjct: 681 MESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNV 740
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
N+ + L M+ G PN + ++ + +AL+++N M+E+G
Sbjct: 741 LIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQG 800
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+L L L GK+ EAE F E+ G P ++++ ++ ++ K E
Sbjct: 801 CLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAF 860
Query: 241 NLSNKM 246
N +M
Sbjct: 861 NFLGRM 866
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 125/266 (46%), Gaps = 2/266 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ +IV+YN +I YC +KA ++ M S ++++Y +II G G
Sbjct: 586 MGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGN 645
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +L M++ GC PD +Y I +C ++ A GL +EMV+ GL PN TY
Sbjct: 646 TTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTA 705
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L ++ +L M +GC PN Q+ L+ +Q A +L M+E+G
Sbjct: 706 LIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEG 765
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
++ + D LC G A + F +MIE+G P+ +++ + + K E +
Sbjct: 766 IFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAE 825
Query: 241 NLSNKMALFGPSMIPKREEYLAEMSA 266
NL ++ G +IP Y+ + A
Sbjct: 826 NLFAELERHG--LIPDEITYVKMIEA 849
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 118/278 (42%), Gaps = 36/278 (12%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV+P+++ YN +I+ CKD V A I++K+ + ++SPD +YTS+I G
Sbjct: 376 MLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHD 435
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMV------------- 107
D A V +M + GC P+ Y+ I C + R+ +A L+ EM+
Sbjct: 436 LDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTG 495
Query: 108 ----------------------EKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
KG PN TY S L+ + L+ RM G
Sbjct: 496 PIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDG 555
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
PNT + L+ + +++ A + N M G + I+ + + C +G +A
Sbjct: 556 VFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAM 615
Query: 206 KSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNL 242
M+++GH + V++ IK + N AL+ L
Sbjct: 616 LVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRIL 653
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 106/253 (41%), Gaps = 30/253 (11%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G +P++ +YN LI K A ++ + M +E I P+V++YT++I GL G
Sbjct: 726 MKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGS 785
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A ++ +M E GC P+ Y++ IR ++ +A L E+ GL P+ TY
Sbjct: 786 TSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVK 845
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKR------------------ 162
+ S + ++N RM+ GC P + L+K K
Sbjct: 846 MIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPN 905
Query: 163 ---------QEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIE 213
Q+ V + + + E G + V + L L G+ EA + MI
Sbjct: 906 CSFGYQTTDQDAVSV---MSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMIS 962
Query: 214 KGHKPSQVSFRRI 226
+G P Q ++ +
Sbjct: 963 QGLCPDQEAYNSL 975
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 95/224 (42%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+ + G++ + +Y+ L+ + +M E + P+++ Y ++I L G
Sbjct: 341 LSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGN 400
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A ++K++ E PD Y + I +C L A + ++M ++G PN TY+
Sbjct: 401 VADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYST 460
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMF-LVKLCKRQEKVEIALQLWNDMVEK 179
S + +++L M+ G LP +C ++ LC E A +L+ DM K
Sbjct: 461 LINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCD-MGCYEDAWRLFVDMKNK 519
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G + L LC G L A F M G P+ V++
Sbjct: 520 GCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTY 563
>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g06920-like [Cucumis sativus]
Length = 904
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 125/257 (48%), Gaps = 2/257 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E G D +YN +ID +CK +V KAY+++E+M+ + P V++Y S+I GL + +
Sbjct: 610 MKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDR 669
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + +E K G + Y++ I + R+ +A +M+E+++KGL+PN T+N
Sbjct: 670 LDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNC 729
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+ ++ + + M C PN + L+ LCK + K A W +M ++
Sbjct: 730 LLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIR-KFNKAFVFWQEMQKQ 788
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
GF + + L G +VEA+ F + EKG + I + AN+
Sbjct: 789 GFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDA 848
Query: 240 QNLSNKMALFGPSMIPK 256
L + L G S+ K
Sbjct: 849 YRLFEEARLKGCSIYTK 865
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 113/223 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G+ P++++ N ++D CK ++++ A I E + + PD ++Y S+I GLG G+
Sbjct: 435 MKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGR 494
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + ++M + P+A Y + IRN+ R D + +EM+ G SP+ N
Sbjct: 495 VDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNT 554
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + ++ L+ + G +P+ +S L+ + A +L+ M E+G
Sbjct: 555 YMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQG 614
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + D C GK+ +A + EM KGH+P+ V++
Sbjct: 615 CVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTY 657
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 105/222 (47%), Gaps = 1/222 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E+G ++ + LI V+ ++ +V+ A ++++M+ + PDV+ Y I G G+
Sbjct: 226 MQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGK 285
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A EMK G D Y + I C A RL +A L + M + P A YN
Sbjct: 286 VDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNT 345
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + +++L R GC+P+ S ++ R+ +V+ AL+ + +M +
Sbjct: 346 MIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDA 405
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
+ + +++ D+LC GKL A M + G P+ ++
Sbjct: 406 IPN-LSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVIT 446
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 111/240 (46%), Gaps = 2/240 (0%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
R G P +VSYNC++ + QV++A K E+M+ + I P++ +Y +I L G+
Sbjct: 367 RRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKL 425
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
+ A V MK+ G +P+ N + C A+RL DA + + + K P+A TY
Sbjct: 426 ETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSL 485
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
+ ++ LY +M+ +PN L++ + + E +++N+M+ G
Sbjct: 486 IEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGC 545
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEALQ 240
+L+ + D + G++ + F E+ G P S+ I L++ EA +
Sbjct: 546 SPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYE 605
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
+PD V+Y LI+ + +V++AYK+ E+M D + P+ + YTS+I G+ +
Sbjct: 476 RPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHK 535
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
+ EM GC PD N + A + L E+ G P+A +Y +
Sbjct: 536 IYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLV 595
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+ ++ L+ M GC+ +T++ ++ + KV A QL +M KG ++
Sbjct: 596 KAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVV 655
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
+ D L + +L EA F E KG
Sbjct: 656 TYGSVIDGLAKIDRLDEAYMLFEEAKSKG 684
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 83/169 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+ + G+ P++ ++NCL+D K ++ +A + M+D +P+ I+Y+ +I GL + +
Sbjct: 715 LMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRK 774
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA +EM++ G P+ Y I A + +A L ++ EKG ++ YN
Sbjct: 775 FNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNA 834
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIA 169
+N ++ L+ GC T++C+ L+ + E +E A
Sbjct: 835 IIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLHKAECIEQA 883
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 81/179 (45%), Gaps = 3/179 (1%)
Query: 1 MREMGVKPDIVSYNCLIDV---YCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGL 57
+ EM + S N I++ + K R++ +A+ ++ MR P +YT++IG L
Sbjct: 153 LEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALST 212
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
D + ++M+E G + + IR + R+ A L+DEM L P+
Sbjct: 213 SRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVL 272
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDM 176
YN+ F + + +W + M G + + + ++ + + +++ A++L+ M
Sbjct: 273 YNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHM 331
Score = 43.5 bits (101), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 38/189 (20%), Positives = 78/189 (41%)
Query: 47 SYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEM 106
+Y S++ + + + +L+EM G P + ++ +++LR+A + M
Sbjct: 132 AYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTM 191
Query: 107 VEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKV 166
+ P + Y S D L+ +M G N L+++ R+ +V
Sbjct: 192 RKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRV 251
Query: 167 EIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ AL L ++M +++ +V D GK+ A K F EM G V++ +
Sbjct: 252 DAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSM 311
Query: 227 KALMELANK 235
++ A++
Sbjct: 312 IGVLCKADR 320
>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
Length = 745
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 110/215 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G++ + +YN LI+ CK +E+A + + M + PDV +YT++I L G
Sbjct: 492 MSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGD 551
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A +L+EM + G P YN + +C++ R+ L+D M+EK + PNA TYN
Sbjct: 552 LDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNS 611
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + N+++S+ +Y M PN + L+K + ++ AL ++M++KG
Sbjct: 612 LMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKG 671
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
F L LL K VEA + F +M ++G
Sbjct: 672 FRLTATSYSALIRLLNKKKKFVEARELFHDMRKEG 706
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 110/211 (52%), Gaps = 14/211 (6%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+KPD+ +Y LID CK +++A+ ++++M D+ I P +++Y ++ G + G+ + +
Sbjct: 532 LKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGK 591
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+L M E +P+AA YN+ ++ YCI ++ + + M + + PN TYN+ +
Sbjct: 592 KLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGH 651
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ +++ + + M+ G S L++L +++K A +L++DM ++G +
Sbjct: 652 CKARNMKEALYFHDEMIQKGFRLTATSYSALIRLLNKKKKFVEARELFHDMRKEGLTAES 711
Query: 186 LVSDVLFDL------------LCDMGKLVEA 204
V D DL LCD +LVEA
Sbjct: 712 DVYDFYIDLNFNEDNLESTLALCD--ELVEA 740
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 108/237 (45%), Gaps = 3/237 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV P++V+Y L D CK V+ A +++ +M ++ + + +Y S+I GL G
Sbjct: 457 MVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGY 516
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A + +M PD Y I C + L A L+ EM++KG+ P TYN+
Sbjct: 517 LEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNV 576
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F S + L M+ PN + L+K + ++ +++ M +
Sbjct: 577 LMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRD 636
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQE 237
G ++L C + EA EMI+KG + + S+ AL+ L NK++
Sbjct: 637 VGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSY---SALIRLLNKKK 690
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 89/178 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+KP IV+YN L++ +C +VE K+++ M +++I P+ +Y S++ +
Sbjct: 562 MLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENN 621
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++ K M+ P+ YN I+ +C A+ +++A DEM++KG AT+Y+
Sbjct: 622 MKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSA 681
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
R+ + L+ M G + F + L ++ +E L L +++VE
Sbjct: 682 LIRLLNKKKKFVEARELFHDMRKEGLTAESDVYDFYIDLNFNEDNLESTLALCDELVE 739
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 114/233 (48%), Gaps = 14/233 (6%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G+ D V+Y +I+ C+ ++E+A K++++M + D ++YT +I G G+
Sbjct: 387 MQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGK 446
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + M + G P+ Y A C ++ A+ L+ EM KGL NA TYN
Sbjct: 447 MAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNS 506
Query: 121 FF----RVFYWSNDLRSSWNLYCRMMGTGCL-PNTQSCMFLV-KLCKRQEKVEIALQLWN 174
+ Y +R+ + M T CL P+ + L+ LCK + ++ A L
Sbjct: 507 LINGLCKAGYLEQAMRTMAD-----MDTACLKPDVYTYTTLIDALCKSGD-LDRAHSLLQ 560
Query: 175 DMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLE-MIEKGHKPSQVSFRRI 226
+M++KG I+ +VL + C G+ VE K L+ M+EK P+ ++ +
Sbjct: 561 EMLDKGIKPTIVTYNVLMNGFCMSGR-VEGGKKLLDWMLEKNIHPNAATYNSL 612
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 95/214 (44%), Gaps = 2/214 (0%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
EM PD+V+Y LI +C ++E A K++++M + P+ YTS++ L G
Sbjct: 284 EMASAPDVVTYGILIHGHCALGELENAVKLLDEMVAGGVEPNATVYTSVVALLCDKGWIS 343
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
A V+++M + D A Y + +C L A DEM KGL+ + TY
Sbjct: 344 DALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMI 403
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGF 181
+ +L + L M + + L+ CKR + E A Q+ N MV++G
Sbjct: 404 NGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAE-AFQMHNAMVQRGV 462
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
++ L D LC G + A + EM KG
Sbjct: 463 TPNVVTYTALTDGLCKQGDVQAANELLHEMSNKG 496
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 94/220 (42%), Gaps = 2/220 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV+P+ Y ++ + C + A ++VE M + D YT+++ G G A
Sbjct: 321 GVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSA 380
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
R EM+ G D Y I C A L +A L+ EM + L + TY +
Sbjct: 381 RRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDG 440
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGS 183
+ + ++ ++ M+ G PN + L LCK Q V+ A +L ++M KG
Sbjct: 441 YCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCK-QGDVQAANELLHEMSNKGLEL 499
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ L + LC G L +A ++ +M KP ++
Sbjct: 500 NACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTY 539
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 98/212 (46%), Gaps = 2/212 (0%)
Query: 13 YNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMK 72
Y ++ +C + A + ++M+ + ++ D ++YT++I GL + ++A +L+EM
Sbjct: 364 YTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMW 423
Query: 73 EYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLR 132
D Y I YC ++ +A + + MV++G++PN TY D++
Sbjct: 424 ARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQ 483
Query: 133 SSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYILVSDVL 191
++ L M G N + L+ LCK +E A++ DM + L
Sbjct: 484 AANELLHEMSNKGLELNACTYNSLINGLCK-AGYLEQAMRTMADMDTACLKPDVYTYTTL 542
Query: 192 FDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
D LC G L A EM++KG KP+ V++
Sbjct: 543 IDALCKSGDLDRAHSLLQEMLDKGIKPTIVTY 574
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 90/215 (41%), Gaps = 19/215 (8%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+R+ G+ P + N ++ D +E ++ K +V SY ++ L G+
Sbjct: 223 LRQYGISPSPEACNAVLSRLPLDEAIELFQELPHK--------NVCSYNILLKALCDAGR 274
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
AR + EM PD Y I +C L +A L+DEMV G+ PNAT Y
Sbjct: 275 VKDARQLFDEM---ASAPDVVTYGILIHGHCALGELENAVKLLDEMVAGGVEPNATVYTS 331
Query: 121 FFRVF----YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDM 176
+ + S+ LR ++ R + L L C + + V A + +++M
Sbjct: 332 VVALLCDKGWISDALRVVEDMVQRKV---ILDEALYTTVLSGFCNKGDLVS-ARRWFDEM 387
Query: 177 VEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEM 211
KG + + + + LC +L EAEK EM
Sbjct: 388 QRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEM 422
Score = 40.8 bits (94), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR V P+ +YN LI +CK R +++A ++M + SY+++I L +
Sbjct: 632 MRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSALIRLLNKKKK 691
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGL 111
+AR++ +M++ G ++ Y+ I L L DE+VE +
Sbjct: 692 FVEARELFHDMRKEGLTAESDVYDFYIDLNFNEDNLESTLALCDELVEASI 742
>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Cucumis sativus]
Length = 904
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 125/257 (48%), Gaps = 2/257 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E G D +YN +ID +CK +V KAY+++E+M+ + P V++Y S+I GL + +
Sbjct: 610 MKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDR 669
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + +E K G + Y++ I + R+ +A +M+E+++KGL+PN T+N
Sbjct: 670 LDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNC 729
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+ ++ + + M C PN + L+ LCK + K A W +M ++
Sbjct: 730 LLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIR-KFNKAFVFWQEMQKQ 788
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
GF + + L G +VEA+ F + EKG + I + AN+
Sbjct: 789 GFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDA 848
Query: 240 QNLSNKMALFGPSMIPK 256
L + L G S+ K
Sbjct: 849 YRLFEEARLKGCSIYTK 865
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 113/223 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G+ P++++ N ++D CK ++++ A I E + + PD ++Y S+I GLG G+
Sbjct: 435 MKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGR 494
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + ++M + P+A Y + IRN+ R D + +EM+ G SP+ N
Sbjct: 495 VDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNT 554
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + ++ L+ + G +P+ +S L+ + A +L+ M E+G
Sbjct: 555 YMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQG 614
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + D C GK+ +A + EM KGH+P+ V++
Sbjct: 615 CVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTY 657
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 105/222 (47%), Gaps = 1/222 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E+G ++ + LI V+ ++ +V+ A ++++M+ + PDV+ Y I G G+
Sbjct: 226 MQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGK 285
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A EMK G D Y + I C A RL +A L + M + P A YN
Sbjct: 286 VDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNT 345
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + +++L R GC+P+ S ++ R+ +V+ AL+ + +M +
Sbjct: 346 MIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDA 405
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
+ + +++ D+LC GKL A M + G P+ ++
Sbjct: 406 IPN-LSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVIT 446
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 111/240 (46%), Gaps = 2/240 (0%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
R G P +VSYNC++ + QV++A K E+M+ + I P++ +Y +I L G+
Sbjct: 367 RRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKL 425
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
+ A V MK+ G +P+ N + C A+RL DA + + + K P+A TY
Sbjct: 426 ETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSL 485
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
+ ++ LY +M+ +PN L++ + + E +++N+M+ G
Sbjct: 486 IEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGC 545
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEALQ 240
+L+ + D + G++ + F E+ G P S+ I L++ EA +
Sbjct: 546 SPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYE 605
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
+PD V+Y LI+ + +V++AYK+ E+M D + P+ + YTS+I G+ +
Sbjct: 476 RPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHK 535
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
+ EM GC PD N + A + L E+ G P+A +Y +
Sbjct: 536 IYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLV 595
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+ ++ L+ M GC+ +T++ ++ + KV A QL +M KG ++
Sbjct: 596 KAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVV 655
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
+ D L + +L EA F E KG
Sbjct: 656 TYGSVIDGLAKIDRLDEAYMLFEEAKSKG 684
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 83/169 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+ + G+ P++ ++NCL+D K ++ +A + M+D +P+ I+Y+ +I GL + +
Sbjct: 715 LMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRK 774
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA +EM++ G P+ Y I A + +A L ++ EKG ++ YN
Sbjct: 775 FNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNA 834
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIA 169
+N ++ L+ GC T++C+ L+ + E +E A
Sbjct: 835 IIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLHKAECIEQA 883
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 81/179 (45%), Gaps = 3/179 (1%)
Query: 1 MREMGVKPDIVSYNCLIDV---YCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGL 57
+ EM + S N I++ + K R++ +A+ ++ MR P +YT++IG L
Sbjct: 153 LEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALST 212
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
D + ++M+E G + + IR + R+ A L+DEM L P+
Sbjct: 213 SRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVL 272
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDM 176
YN+ F + + +W + M G + + + ++ + + +++ A++L+ M
Sbjct: 273 YNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHM 331
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 38/189 (20%), Positives = 78/189 (41%)
Query: 47 SYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEM 106
+Y S++ + + + +L+EM G P + ++ +++LR+A + M
Sbjct: 132 AYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTM 191
Query: 107 VEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKV 166
+ P + Y S D L+ +M G N L+++ R+ +V
Sbjct: 192 RKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRV 251
Query: 167 EIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ AL L ++M +++ +V D GK+ A K F EM G V++ +
Sbjct: 252 DAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSM 311
Query: 227 KALMELANK 235
++ A++
Sbjct: 312 IGVLCKADR 320
>gi|115473111|ref|NP_001060154.1| Os07g0590600 [Oryza sativa Japonica Group]
gi|34393454|dbj|BAC82993.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113611690|dbj|BAF22068.1| Os07g0590600 [Oryza sativa Japonica Group]
Length = 784
Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 122/247 (49%), Gaps = 2/247 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G P +V+YN LI Y KD +E+A + ++M + + PDV++YT++I GL G+
Sbjct: 304 MERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGK 363
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A EM GC P+ YNA I+ + + + + + DE G P+ T+N
Sbjct: 364 IDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNT 423
Query: 121 FFRVFYWSNDLRSSWN-LYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
VF N L S + ++ M G +P + + L+ R ++A+Q++ M+E
Sbjct: 424 LLAVF-GQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEA 482
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
G + + + L G+ +AEK F EM E+ KP + S+ + A + + +
Sbjct: 483 GIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKM 542
Query: 240 QNLSNKM 246
+ LS+ +
Sbjct: 543 KALSDDI 549
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 107/224 (47%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEK-AYKIVEKMRDEDISPDVISYTSIIGGLGLVG 59
M+E GV PD +YN LI C+ R + K A ++ ++M+ PD +++ S++ G
Sbjct: 234 MKEHGVAPDRYTYNTLISC-CRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKAR 292
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ D+A +V++EM+ GC P YN+ I +Y L A L EM KG+ P+ TY
Sbjct: 293 RHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYT 352
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ + ++ Y M+ GC PN + L+K+ + K + ++++
Sbjct: 353 TLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSA 412
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
GF I+ + L + G E F EM + G+ P + ++
Sbjct: 413 GFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTY 456
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 118/267 (44%), Gaps = 3/267 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCK-DRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVG 59
M + GV+P IV+YN ++ VY K ++ ++V M++ ++PD +Y ++I
Sbjct: 198 MVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRA 257
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+A V EMK G PD +N+ + Y A+R +A ++ EM G P+ TYN
Sbjct: 258 LYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYN 317
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ L + L M G P+ + L+ R K++ A+ +++MV
Sbjct: 318 SLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRN 377
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
G + + L + GK E F E G P V++ + A+ +
Sbjct: 378 GCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEV 437
Query: 240 QNLSNKMALFGPSMIPKREEYLAEMSA 266
+ +M G IP+R+ Y++ +S+
Sbjct: 438 SGVFKEMKKAG--YIPERDTYVSLISS 462
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 75/144 (52%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
DI N ++ +Y K+R V K KI+ M++ I+ +Y S++ +G +K ++L
Sbjct: 592 DINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENIL 651
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
E+K G PD +YN I Y ++++AS L EM GL P+ TYN+F + + +
Sbjct: 652 TEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSN 711
Query: 129 NDLRSSWNLYCRMMGTGCLPNTQS 152
+ + L M+ GC PN ++
Sbjct: 712 SMFEEAIELVRYMVTQGCKPNERT 735
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 96/219 (43%), Gaps = 5/219 (2%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK-ARD 66
PD +Y L+ + + + A + +M D + P +++Y ++ + P K +
Sbjct: 170 PDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVE 229
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKR--LRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++ MKE+G PD YN I C +R ++A+ + DEM G P+ T+N V
Sbjct: 230 LVASMKEHGVAPDRYTYNTLIS--CCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDV 287
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + + + M GC P+ + L+ + +E A+ L +M KG
Sbjct: 288 YGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPD 347
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ L L GK+ A + EM+ G KP+ ++
Sbjct: 348 VVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTY 386
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 96/226 (42%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G P+ +Y LI Y + + A +I ++M + I PDV +Y +++ L G+
Sbjct: 444 MKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGR 503
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A + EM+E C PD +Y++ + Y AKRL L D++ + + P+
Sbjct: 504 WEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKT 563
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
V N+L + + + C + +V + + V ++ + M E
Sbjct: 564 LVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESA 623
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ L + +G + E E+ G +P + S+ +
Sbjct: 624 INLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTV 669
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 54/99 (54%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
++ GV+PD SYN +I Y + Q+++A ++ +M+ + PDV++Y +
Sbjct: 654 IKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSM 713
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDA 99
++A ++++ M GC P+ YN+ + YC +L DA
Sbjct: 714 FEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDA 752
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 94/218 (43%), Gaps = 3/218 (1%)
Query: 24 RQVEKAYKIVEK--MRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAA 81
R + +A ++ E + D PD +YT+++ G+ A V + M + G P
Sbjct: 149 RVMARAGRLAEASALLDAAPGPDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIV 208
Query: 82 AYNAAIRNYC-IAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCR 140
YN + Y +A ++ L+ M E G++P+ TYN + + ++
Sbjct: 209 TYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDE 268
Query: 141 MMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGK 200
M +G P+ + L+ + + + + A+++ +M G ++ + L G
Sbjct: 269 MKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGL 328
Query: 201 LVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEA 238
L +A EM KG KP V++ + + ++ A K +A
Sbjct: 329 LEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDA 366
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 50/251 (19%), Positives = 90/251 (35%), Gaps = 36/251 (14%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISP----------------- 43
M E KPD SY+ L+ Y ++++K + + + E I P
Sbjct: 514 MEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNN 573
Query: 44 ------------------DVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNA 85
D+ +++ G K +L MKE AA YN+
Sbjct: 574 LAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNS 633
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
+ Y ++ E+ G+ P+ +YN + ++ + L+ M +G
Sbjct: 634 LMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSG 693
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
P+ + VK E A++L MV +G + + + C GKL +A
Sbjct: 694 LKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDA- 752
Query: 206 KSFLEMIEKGH 216
K F+ + + H
Sbjct: 753 KIFVSNLPQLH 763
>gi|357140697|ref|XP_003571900.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Brachypodium distachyon]
Length = 571
Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 116/226 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+ P+ V++N L++ YCKD A ++ E+M+ + I+ V++Y++++ GL G+
Sbjct: 249 MVEAGISPNEVTFNVLVNGYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGK 308
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++ ++ EMK+ G P+ A N+ + +C + DA G +D M +K + PN TY +
Sbjct: 309 VEEGVKLVDEMKDLGLVPNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTI 368
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + ++ + + M G G PN + L+ R L ++M KG
Sbjct: 369 LVDGYRRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKG 428
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ I+ +VL LC G++ +A K EM+ G +P +++ I
Sbjct: 429 VRADIVTYNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTI 474
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 114/232 (49%), Gaps = 1/232 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+++G+ P++ + N +++ +CK + A ++ M +++ P+V++YT ++ G + +
Sbjct: 319 MKDLGLVPNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDK 378
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A V + M G P+A YN I + R SGL+DEM KG+ + TYN+
Sbjct: 379 MKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNV 438
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++R + L M+ G P + ++ + ++ A ++ M +
Sbjct: 439 LIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTRMEKGK 498
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIK-ALME 231
+ ++ +V LC MGK+ E + EM+EKG P+ V++ IK +ME
Sbjct: 499 KRANVVTYNVFIKCLCRMGKMEETNELLNEMLEKGLVPNGVTYDTIKEGMME 550
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 105/221 (47%), Gaps = 5/221 (2%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
+P S N L+ +V+ A + + +SPD+ ++ +I GL GQ KA D
Sbjct: 147 RPSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGD 206
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCI---AKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
V K+++ +G P YN I YC A R+ L+ EMVE G+SPN T+N+
Sbjct: 207 VAKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFNVLVN 266
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEKGFG 182
+ ++ ++ ++ M G + + LV LC + KVE ++L ++M + G
Sbjct: 267 GYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCS-EGKVEEGVKLVDEMKDLGLV 325
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + + + C G + +AE M +K KP+ V++
Sbjct: 326 PNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTY 366
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 101/223 (45%), Gaps = 16/223 (7%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + VKP++V+Y L+D Y + +++ A + E M + + P+ Y +I G G
Sbjct: 354 MEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNGD 413
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+L EM+ G D YN I C+ +R A L+DEM+ GL P TYN
Sbjct: 414 WRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNT 473
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ +++S++ + RM N + +K R K+E +L N+M+EKG
Sbjct: 474 IINGYCEKGNIKSAYEIRTRMEKGKKRANVVTYNVFIKCLCRMGKMEETNELLNEMLEKG 533
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + V +D + + M+EKG+ P F
Sbjct: 534 ----LVPNGVTYDTIKE------------GMMEKGYTPDVRGF 560
>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1151
Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 123/261 (47%), Gaps = 35/261 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDIS------------------ 42
M MG+KPDI +YNCLI+ Y K + +EKAY+++ +++ E+++
Sbjct: 398 MTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGD 457
Query: 43 -----------------PDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNA 85
P+++ YT+I+ GL G+ ++A +L MK+ G PD YN
Sbjct: 458 LTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNT 517
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
I +C A ++ + + EM+ KGL PN TY F + + +++++ + M+ +G
Sbjct: 518 VIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSG 577
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
PN C L+ + A + M+++G + VL L GKL EA
Sbjct: 578 IAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAM 637
Query: 206 KSFLEMIEKGHKPSQVSFRRI 226
F E+++KG P ++ +
Sbjct: 638 GVFSELLDKGLVPDVFTYTSL 658
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 121/241 (50%), Gaps = 2/241 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV PD+ +++ LI K+ ++++A + ++ D+ + PDV +YTS+I L G
Sbjct: 608 MLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGD 667
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A ++ +M + G P+ YNA I C + A L D + EKGL+ N+ TY+
Sbjct: 668 LKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYST 727
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ S +L ++ L+ M G P++ L+ C + E AL L+ MVE+G
Sbjct: 728 IIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEG 787
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEAL 239
S + L D +GKL+EA + +M++ P+ V++ I+ + N +EA
Sbjct: 788 IAS-TPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAE 846
Query: 240 Q 240
Q
Sbjct: 847 Q 847
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 106/223 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M MG+KPD V+Y LI+ + K + A+++ E+M I + +Y ++I GL +G
Sbjct: 328 MYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGD 387
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA D+ EM G PD YN I Y + + A L+ E+ ++ L+ NA
Sbjct: 388 LEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGA 447
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
DL + L+ M+ G PN +VK ++ + E A+++ M ++G
Sbjct: 448 IVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQG 507
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + + C GK+ E + +EMI KG KP+ ++
Sbjct: 508 LSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTY 550
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 121/275 (44%), Gaps = 36/275 (13%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
+ PD+ +Y LI+ YC+ +VE+ ++ M ++ P++++Y+ +I GL G D+A
Sbjct: 227 AIVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEA 286
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++ + M G PD Y I +C KR + ++DEM GL P+ Y
Sbjct: 287 LELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALING 346
Query: 125 F---------------------------YWS--------NDLRSSWNLYCRMMGTGCLPN 149
F Y++ DL + +L+ M G P+
Sbjct: 347 FVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPD 406
Query: 150 TQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFL 209
Q+ L++ + + +E A +L ++ ++ + + + + LC G L A + F
Sbjct: 407 IQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQ 466
Query: 210 EMIEKGHKPSQVSFRRI-KALMELANKQEALQNLS 243
EMI G KP+ V + I K L++ +EA++ L
Sbjct: 467 EMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILG 501
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 108/237 (45%), Gaps = 3/237 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+KP++ +Y I YC+ +++ A + +M D I+P+ + T +I G G KA
Sbjct: 542 GLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKA 601
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ M + G PD ++ I +L++A G+ E+++KGL P+ TY
Sbjct: 602 FAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISN 661
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGS 183
DL++++ L+ M G PN + L+ LCK E + A +L++ + EKG
Sbjct: 662 LCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGE-IAKARELFDGIPEKGLAR 720
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP-SQVSFRRIKALMELANKQEAL 239
+ + C L EA + F M G P S V I + N ++AL
Sbjct: 721 NSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKAL 777
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 100/219 (45%), Gaps = 1/219 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ +GV PD Y LID CK EKA + M +E I+ ++ ++I G +G+
Sbjct: 748 MKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIA-STPAFNALIDGFFKLGK 806
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++++M + P+ Y I +C +++A L EM ++ + PN TY
Sbjct: 807 LIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTS 866
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++L+ M+ G P+ + +V ++ AL+L +DM+ +G
Sbjct: 867 LLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEG 926
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
+ +L D LC L E K E+ ++G K S
Sbjct: 927 VNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSKLS 965
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 83/177 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + + P+ V+Y LI+ +C +++A ++ +M+ ++ P+V++YTS++ G +G+
Sbjct: 817 MVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGR 876
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ + EM G PD A++ + + A L+D+M+ +G++ Y +
Sbjct: 877 RSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTI 936
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
N+L + + G + +C LV R + + AL++ MV
Sbjct: 937 LIDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLVCCFHRAGRTDEALRVLESMV 993
>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 618
Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 116/223 (52%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E +K +V Y+ +ID CKD ++ A + +M + I DV++Y+SIIGGL G+
Sbjct: 235 MEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGR 294
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D +L+EM P+ ++A I + +L +A L +EMV +G++P+ TY+
Sbjct: 295 WDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSS 354
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F N L + + M+ GC PN + L+ + ++V+ ++L+ ++ KG
Sbjct: 355 LIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKG 414
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + + L C GKL A++ F EM+ +G PS V++
Sbjct: 415 LVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTY 457
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 118/221 (53%), Gaps = 4/221 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+K D+V+Y+ +I C D + + K++ +M +I P+V++++++I G+
Sbjct: 270 MEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGK 329
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A+++ EM G PD Y++ I +C RL +A+ ++D MV KG PN TY++
Sbjct: 330 LLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSI 389
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + + L+C + G + +T + LV+ + K+ +A +L+ +MV +G
Sbjct: 390 LINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRG 449
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQV 221
++ +L D LCD G+L +A LE+ EK K +
Sbjct: 450 VPPSVVTYGILLDGLCDNGELQKA----LEIFEKMQKSRMI 486
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 118/227 (51%), Gaps = 5/227 (2%)
Query: 1 MREM---GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGL 57
+REM + P++V+++ LIDV+ K+ ++ +A ++ +M I+PD I+Y+S+I G
Sbjct: 302 LREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCK 361
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
+ +A +L M GC P+ Y+ I +YC AKR+ + L E+ KGL + T
Sbjct: 362 ENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVT 421
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDM 176
YN + F S L + L+ M+ G P+ + + L LC E ++ AL+++ M
Sbjct: 422 YNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGE-LQKALEIFEKM 480
Query: 177 VEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ I + +++ +C+ K+ +A F + KG KP +++
Sbjct: 481 QKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTY 527
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 101/226 (44%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G + + ++Y +++ CK A + KM + I V+ Y+ +I L G
Sbjct: 200 MVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGN 259
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A + EM+ G D AY++ I C R D + ++ EM+ + + PN T++
Sbjct: 260 LDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSA 319
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
VF L + LY M+ G P+T + L+ ++ ++ A Q+ + MV KG
Sbjct: 320 LIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKG 379
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
I+ +L + C ++ + F E+ KG V++ +
Sbjct: 380 CEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTL 425
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 120/250 (48%), Gaps = 8/250 (3%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G++ ++ + N +I+ +C+ R++ A+ +V + P+ I+++++I G L G+ +A
Sbjct: 99 GIEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEA 158
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++ M E P+ N I C+ R+ +A L+D MV+ G N TY
Sbjct: 159 VALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNR 218
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPN-TQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
S + + +L+ +M + Q + + LCK ++ AL L+N+M KG +
Sbjct: 219 MCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCK-DGNLDDALSLFNEMEMKGIKA 277
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL---Q 240
++ + LC+ G+ + K EMI + P+ V+F AL+++ K+ L +
Sbjct: 278 DVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTF---SALIDVFVKEGKLLEAK 334
Query: 241 NLSNKMALFG 250
L N+M G
Sbjct: 335 ELYNEMVARG 344
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 107/227 (47%), Gaps = 8/227 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M EM +P++V+ N LI+ C +V +A ++++M + I+Y ++ + G
Sbjct: 165 MVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGN 224
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A D+ ++M+E Y+ I + C L DA L +EM KG+ + Y+
Sbjct: 225 TALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSS 284
Query: 121 FFRVFYWSNDLRSSWN----LYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDM 176
+ ND R W+ + M+G +PN + L+ + ++ K+ A +L+N+M
Sbjct: 285 I--IGGLCNDGR--WDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEM 340
Query: 177 VEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
V +G + L D C +L EA + M+ KG +P+ V++
Sbjct: 341 VARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTY 387
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 102/208 (49%), Gaps = 4/208 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ D V+YN L+ +C+ ++ A ++ ++M + P V++Y ++ GL G+ KA
Sbjct: 414 GLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKA 473
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++ ++M++ YN I C A ++ DA L + KG+ P+ TYN+
Sbjct: 474 LEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGG 533
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
L + L+ +M GC P+ + L++ V +++L +M +GF +
Sbjct: 534 LCKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVELIEEMKMRGFAAD 593
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMI 212
++ +L D G+L +K+FL+M+
Sbjct: 594 ASTIKMVVVMLSD-GRL---DKTFLDML 617
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 95/223 (42%), Gaps = 35/223 (15%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G +P+IV+Y+ LI+ YCK ++V+ ++ ++ + + D ++Y +++ G G+
Sbjct: 375 MVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGK 434
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A+++ +EM G P Y + C L+ A + ++M + + YN+
Sbjct: 435 LNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNI 494
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++ + +W+L+C + G P+
Sbjct: 495 IIHGMCNASKVDDAWSLFCSLSVKGVKPD------------------------------- 523
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+L +V+ LC G L EA+ F +M E G PS ++
Sbjct: 524 ----VLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTY 562
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 64/137 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV P +V+Y L+D C + +++KA +I EKM+ + + Y II G+ +
Sbjct: 445 MVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASK 504
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A + + G PD YN I C L +A L +M E G +P+ TYN+
Sbjct: 505 VDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNI 564
Query: 121 FFRVFYWSNDLRSSWNL 137
R + + SS L
Sbjct: 565 LIRAHLGGSGVISSVEL 581
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 95/229 (41%), Gaps = 2/229 (0%)
Query: 23 DRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAA 82
D +V +A + E M P +I ++ + + + D KEM G +
Sbjct: 47 DIKVNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYT 106
Query: 83 YNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMM 142
N I +C ++L A ++ ++ G PN T++ F + + L RM+
Sbjct: 107 MNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMV 166
Query: 143 GTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLV 202
PN + L+ + +V AL L + MV+ G + + + + +C G
Sbjct: 167 EMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTA 226
Query: 203 EAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEALQNLSNKMALFG 250
A F +M E+ K S V + I +L + N +AL +L N+M + G
Sbjct: 227 LALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDAL-SLFNEMEMKG 274
>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
Length = 757
Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 123/257 (47%), Gaps = 2/257 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E P+ V+YN +I CK+ QVE+A K+ + + I PDV +Y S+I GL L
Sbjct: 362 MIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRN 421
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A ++ KEMK GC+PD YN I + C +L++A L+ EM G + N TYN
Sbjct: 422 HTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNT 481
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
F + + + ++ +M G N+ + L+ LCK E+VE A QL + M+ +
Sbjct: 482 LIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCK-SERVEEASQLMDQMIME 540
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
G + L C G + +A M G +P V++ + A + A + EA
Sbjct: 541 GLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAA 600
Query: 240 QNLSNKMALFGPSMIPK 256
L + + G ++ P
Sbjct: 601 TKLLRTIQMKGINLTPH 617
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 123/251 (49%), Gaps = 3/251 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+RE G PD ++N L++ K V+ A ++++ M E PD+ +Y S+I GL +G+
Sbjct: 293 LRE-GFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGE 351
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A VL +M E C P+ YN I C ++ +A+ L + KG+ P+ TYN
Sbjct: 352 VDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNS 411
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEK 179
+ S + + LY M GC P+ + L+ LC R K++ AL L +M
Sbjct: 412 LIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRG-KLQEALNLLKEMEVS 470
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
G ++ + L D C ++ EAE+ F +M +G + V++ + + + + E
Sbjct: 471 GCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEA 530
Query: 240 QNLSNKMALFG 250
L ++M + G
Sbjct: 531 SQLMDQMIMEG 541
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 114/226 (50%), Gaps = 1/226 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+RE G PDI +YN LI CK +V++A K++ +M + D SP+ ++Y +II L Q
Sbjct: 328 LRE-GFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQ 386
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A + + G PD YN+ I+ C+++ A L EM KG P+ TYN+
Sbjct: 387 VEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNM 446
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L+ + NL M +GC N + L+ + +++ A ++++ M +G
Sbjct: 447 LIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQG 506
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + L D LC ++ EA + +MI +G +P + ++ +
Sbjct: 507 VSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSL 552
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 120/247 (48%), Gaps = 10/247 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV + V+YN LID CK +VE+A +++++M E + PD +Y S++ G
Sbjct: 502 MELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGD 561
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA D+++ M GC PD Y I C A R+ A+ L+ + KG++ YN
Sbjct: 562 IKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNP 621
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+ + + + L+ M+ P+ + + + LC+ + A+ +M+E+
Sbjct: 622 VIQALFRRKRSKEAVRLFREMIEKAEAPDAVTYKIVFRGLCQGGGPIGEAVDFVMEMLER 681
Query: 180 G----FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANK 235
G F S+ ++++ LF L +G L++ ++M+ + K S I+ ++++
Sbjct: 682 GYVPEFSSFYMLAEGLFSLAM-VGTLIK----LIDMVMEKAKFSDNEVTMIRGFLKISKY 736
Query: 236 QEALQNL 242
Q+AL L
Sbjct: 737 QDALATL 743
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 94/194 (48%), Gaps = 3/194 (1%)
Query: 20 YCKDRQVEKAYKIVEKMR-DEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYP 78
+CK+ ++E+A + +E+M E PD ++ ++ GL G A +V+ M G P
Sbjct: 275 FCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDP 334
Query: 79 DAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLY 138
D YN+ I C + +A ++++M+E+ SPN TYN N + + L
Sbjct: 335 DIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLA 394
Query: 139 CRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCD 197
+ G G LP+ + L++ LC + +A++L+ +M KG ++L D LC
Sbjct: 395 LVLTGKGILPDVCTYNSLIQGLCLSRNHT-VAMELYKEMKTKGCHPDEFTYNMLIDSLCF 453
Query: 198 MGKLVEAEKSFLEM 211
GKL EA EM
Sbjct: 454 RGKLQEALNLLKEM 467
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 110/228 (48%), Gaps = 3/228 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G++PD+ ++N LI C+ Q+ A ++E+M D + PD ++T+I+ G G
Sbjct: 186 MVSRGIRPDVSTFNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGN 245
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEM-VEKGLSPNATTYN 119
D A V ++M E GC N + +C R+ +A ++EM + +G P+ T+N
Sbjct: 246 LDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFN 305
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVE 178
+ + ++ + + M+ G P+ + L+ LCK E V+ A+++ N M+E
Sbjct: 306 MLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGE-VDEAVKVLNQMIE 364
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + + + LC ++ EA K L + KG P ++ +
Sbjct: 365 RDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSL 412
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 112/254 (44%), Gaps = 3/254 (1%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E GV + YN L++V +++ M I PDV ++ +I L Q
Sbjct: 153 EFGVVANTHFYNFLLNVLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNILIKALCRAHQIR 212
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
A +++EM+++G PD + ++ + L A + ++MVE G T N+
Sbjct: 213 PAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLV 272
Query: 123 RVFYWSNDLRSSWNLYCRM-MGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
F + + M + G P+ + LV + V+ AL++ + M+ +GF
Sbjct: 273 NGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGF 332
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQN 241
I + L LC +G++ EA K +MIE+ P+ V++ I + + N+ E
Sbjct: 333 DPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATK 392
Query: 242 LSNKMALFGPSMIP 255
L+ + L G ++P
Sbjct: 393 LA--LVLTGKGILP 404
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 59/146 (40%), Gaps = 1/146 (0%)
Query: 37 RDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRL 96
+ + P + ++ LG G+ D +D+LKEMK D + I +Y
Sbjct: 81 KQPNFKPSSSIFKEVLHKLGKAGEFDAMKDILKEMKISLSVIDNDSLLVFIESYASFGLY 140
Query: 97 RDASGLMDEM-VEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMF 155
+ +D M VE G+ N YN V N L+ + M+ G P+ +
Sbjct: 141 NEILQFVDAMEVEFGVVANTHFYNFLLNVLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNI 200
Query: 156 LVKLCKRQEKVEIALQLWNDMVEKGF 181
L+K R ++ A+ L +M + G
Sbjct: 201 LIKALCRAHQIRPAILLMEEMEDFGL 226
>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 485
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 122/227 (53%), Gaps = 8/227 (3%)
Query: 1 MREMGVK---PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGL 57
MR+M ++ P+++++ +IDV+ K+ + +A K+ E+M + PDV +Y S+I GL +
Sbjct: 232 MRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCM 291
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
G+ D+A+ +L M GC PD YN I +C +KR+ + + L EM ++GL + T
Sbjct: 292 HGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTIT 351
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDM 176
YN + ++ + ++ ++ RM PN ++ + L LC +VE AL L+ +M
Sbjct: 352 YNTIIQGYFQAGRPDAAQEIFSRM---DSRPNIRTYSILLYGLCMNW-RVEKALVLFENM 407
Query: 177 VEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ I +++ +C +G + +A F + KG KP VS+
Sbjct: 408 QKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSY 454
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 116/246 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G +PD+V+ + LI+ +C+ +V A +V KM + PDV+ Y +II G +G
Sbjct: 130 MMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGL 189
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A ++ M+ G DA YN+ + C + R DA+ LM +MV + + PN T+
Sbjct: 190 VNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTA 249
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
VF + LY M P+ + L+ +V+ A Q+ + MV KG
Sbjct: 250 VIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKG 309
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
++ + L + C ++ E K F EM ++G +++ I A + +A Q
Sbjct: 310 CLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQ 369
Query: 241 NLSNKM 246
+ ++M
Sbjct: 370 EIFSRM 375
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 102/223 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ D+ SYN +I+ C+ + A +V KM PDV++ +S+I G +
Sbjct: 95 MEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNR 154
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A D++ +M+E G PD YN I C + DA L D M G+ +A TYN
Sbjct: 155 VFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNS 214
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
S + L M+ +PN + ++ + ++ K A++L+ +M +
Sbjct: 215 LVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRC 274
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + L + LC G++ EA++ M+ KG P V++
Sbjct: 275 VDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTY 317
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 87/181 (48%), Gaps = 3/181 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD+V+YN LI+ +CK ++V++ K+ +M + D I+Y +II G G+
Sbjct: 305 MVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGR 364
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
PD A+++ M P+ Y+ + C+ R+ A L + M + + + TTYN+
Sbjct: 365 PDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNI 421
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++ +W+L+ + G P+ S ++ R+ + + + L+ M E G
Sbjct: 422 VIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDG 481
Query: 181 F 181
Sbjct: 482 L 482
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 57/111 (51%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
M +P+I +Y+ L+ C + +VEKA + E M+ +I D+ +Y +I G+ +G +
Sbjct: 374 RMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVE 433
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSP 113
A D+ + + G PD +Y I +C ++ + L +M E GL P
Sbjct: 434 DAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 92/236 (38%), Gaps = 1/236 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P IV ++ ++ K + + + M I D+ SY +I L + A V
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 126
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
+ +M ++G PD ++ I +C R+ DA L+ +M E G P+ YN
Sbjct: 127 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 186
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ + L+ RM G + + LV + A +L DMV + ++
Sbjct: 187 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 246
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNL 242
+ D+ GK EA K + EM + P ++ I L EA Q L
Sbjct: 247 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQML 302
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 45/78 (57%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ ++ DI +YN +I CK VE A+ + + + + PDV+SYT++I G Q
Sbjct: 407 MQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQ 466
Query: 61 PDKARDVLKEMKEYGCYP 78
DK+ + ++M+E G P
Sbjct: 467 WDKSDLLYRKMQEDGLLP 484
>gi|302776656|ref|XP_002971480.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
gi|300160612|gb|EFJ27229.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
Length = 631
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 109/229 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ PD +YN +IDV + EKAY M+ SPDV++Y +++ GL + +
Sbjct: 396 MNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRR 455
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A D+ EM+ C PD + I A R+ DA +V+ G +PN+ YN
Sbjct: 456 TDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNA 515
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F S + + L+ M+ C P++ + LV R+ +A++L +MV +G
Sbjct: 516 LISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREG 575
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKAL 229
+ +VL L G++ +A F EMI KG P ++ + L
Sbjct: 576 HTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSALPNL 624
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 104/214 (48%), Gaps = 5/214 (2%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD+ +YN LI + CK +Q+E+A + ++ + DV +Y+ ++ G G+ KA +V
Sbjct: 299 PDVFTYNLLIAL-CKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEV 357
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAK--RLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
M++ GC PD YN I C+ K ++ +A L+++M KG+ P+ TYN+ V
Sbjct: 358 FYNMQKAGCMPDTVVYNVLIS--CLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVL 415
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+++ + M P+ + L+ K+ + + A L+++M +
Sbjct: 416 SSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDL 475
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
L D L G++ +A + +++ GH P+
Sbjct: 476 TTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPN 509
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 95/219 (43%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV D+ +Y+ L+D + K + KA ++ M+ PD + Y +I LG G+ D+A
Sbjct: 330 GVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEA 389
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++L++M G PD YN I R A M + SP+ TYN
Sbjct: 390 LELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNG 449
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ +L+ M C+P+ + L+ + ++E AL+ +V+ G
Sbjct: 450 LKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPN 509
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + L C G++ + + F +MIE P +++
Sbjct: 510 SYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITY 548
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 100/235 (42%), Gaps = 2/235 (0%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDE-DISPDVISYTSIIGGLGLVGQPDKAR 65
+PD V++ + C+ R+VE+A + + MR+ D +PDV++Y ++I G G D+A
Sbjct: 86 QPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDCAPDVVAYNTLIAGYCKAGDGDRAL 145
Query: 66 DVLKEMKEYG-CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
D+ + +K+ G C P+A +++ + C R DA + EM+ GL + N
Sbjct: 146 DMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQEMLGAGLKADVNVCNTLIHC 205
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
LR + L M C + + LV R ++ G
Sbjct: 206 TCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAHCRAGQMHEVASFMELARHDGCALS 265
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
+ + + G+L EA + F + K P ++ + AL + +EAL
Sbjct: 266 AVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPDVFTYNLLIALCKSKQLEEAL 320
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 105/244 (43%), Gaps = 2/244 (0%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
+E KP+ VS++ L+ CK + A + ++M + DV ++I +G
Sbjct: 153 QEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQEMLGAGLKADVNVCNTLIHCTCRLGML 212
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
+AR +L M + C DA Y + +C A ++ + + M+ G + +A YN
Sbjct: 213 RQARRLLHHMTAHACARDAFTYGILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFI 272
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
+ F L + L+ M +P+ + L+ LCK ++ +E AL L+ + + G
Sbjct: 273 IQGFIRCGRLAEATQLFESTMTKESVPDVFTYNLLIALCKSKQ-LEEALTLFQEAEQGGV 331
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEALQ 240
+ L D G+ +A + F M + G P V + I L + EAL+
Sbjct: 332 VLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALE 391
Query: 241 NLSN 244
L +
Sbjct: 392 LLED 395
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 93/210 (44%), Gaps = 3/210 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ D + ++ CK + E +++ ++R + + ++ T I G G D A
Sbjct: 13 GLPVDAHTATAMVKEVCKLGRTELLAELLAELRQKGVGLSEVTCTECIQAFGRAGDLDAA 72
Query: 65 RDVLKEMKEYG-CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEK-GLSPNATTYNLFF 122
+L +M+ C PD A+ AA+ C +R+ A L D+M E +P+ YN
Sbjct: 73 MGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDCAPDVVAYNTLI 132
Query: 123 RVFYWSNDLRSSWNLYCRMMGTG-CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
+ + D + +++ R+ G C PN S LV + + AL ++ +M+ G
Sbjct: 133 AGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQEMLGAGL 192
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEM 211
+ + V + L C +G L +A + M
Sbjct: 193 KADVNVCNTLIHCTCRLGMLRQARRLLHHM 222
>gi|125600921|gb|EAZ40497.1| hypothetical protein OsJ_24952 [Oryza sativa Japonica Group]
Length = 766
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 122/247 (49%), Gaps = 2/247 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G P +V+YN LI Y KD +E+A + ++M + + PDV++YT++I GL G+
Sbjct: 286 MERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGK 345
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A EM GC P+ YNA I+ + + + + + DE G P+ T+N
Sbjct: 346 IDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNT 405
Query: 121 FFRVFYWSNDLRSSWN-LYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
VF N L S + ++ M G +P + + L+ R ++A+Q++ M+E
Sbjct: 406 LLAVF-GQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEA 464
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
G + + + L G+ +AEK F EM E+ KP + S+ + A + + +
Sbjct: 465 GIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKM 524
Query: 240 QNLSNKM 246
+ LS+ +
Sbjct: 525 KALSDDI 531
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 107/224 (47%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEK-AYKIVEKMRDEDISPDVISYTSIIGGLGLVG 59
M+E GV PD +YN LI C+ R + K A ++ ++M+ PD +++ S++ G
Sbjct: 216 MKEHGVAPDRYTYNTLISC-CRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKAR 274
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ D+A +V++EM+ GC P YN+ I +Y L A L EM KG+ P+ TY
Sbjct: 275 RHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYT 334
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ + ++ Y M+ GC PN + L+K+ + K + ++++
Sbjct: 335 TLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSA 394
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
GF I+ + L + G E F EM + G+ P + ++
Sbjct: 395 GFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTY 438
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 118/267 (44%), Gaps = 3/267 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCK-DRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVG 59
M + GV+P IV+YN ++ VY K ++ ++V M++ ++PD +Y ++I
Sbjct: 180 MVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRA 239
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+A V EMK G PD +N+ + Y A+R +A ++ EM G P+ TYN
Sbjct: 240 LYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYN 299
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ L + L M G P+ + L+ R K++ A+ +++MV
Sbjct: 300 SLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRN 359
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
G + + L + GK E F E G P V++ + A+ +
Sbjct: 360 GCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEV 419
Query: 240 QNLSNKMALFGPSMIPKREEYLAEMSA 266
+ +M G IP+R+ Y++ +S+
Sbjct: 420 SGVFKEMKKAG--YIPERDTYVSLISS 444
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 75/144 (52%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
DI N ++ +Y K+R V K KI+ M++ I+ +Y S++ +G +K ++L
Sbjct: 574 DINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENIL 633
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
E+K G PD +YN I Y ++++AS L EM GL P+ TYN+F + + +
Sbjct: 634 TEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSN 693
Query: 129 NDLRSSWNLYCRMMGTGCLPNTQS 152
+ + L M+ GC PN ++
Sbjct: 694 SMFEEAIELVRYMVTQGCKPNERT 717
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 96/219 (43%), Gaps = 5/219 (2%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK-ARD 66
PD +Y L+ + + + A + +M D + P +++Y ++ + P K +
Sbjct: 152 PDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVE 211
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKR--LRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++ MKE+G PD YN I C +R ++A+ + DEM G P+ T+N V
Sbjct: 212 LVASMKEHGVAPDRYTYNTLIS--CCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDV 269
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + + + M GC P+ + L+ + +E A+ L +M KG
Sbjct: 270 YGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPD 329
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ L L GK+ A + EM+ G KP+ ++
Sbjct: 330 VVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTY 368
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 96/226 (42%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G P+ +Y LI Y + + A +I ++M + I PDV +Y +++ L G+
Sbjct: 426 MKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGR 485
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A + EM+E C PD +Y++ + Y AKRL L D++ + + P+
Sbjct: 486 WEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKT 545
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
V N+L + + + C + +V + + V ++ + M E
Sbjct: 546 LVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESA 605
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ L + +G + E E+ G +P + S+ +
Sbjct: 606 INLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTV 651
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 54/99 (54%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
++ GV+PD SYN +I Y + Q+++A ++ +M+ + PDV++Y +
Sbjct: 636 IKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSM 695
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDA 99
++A ++++ M GC P+ YN+ + YC +L DA
Sbjct: 696 FEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDA 734
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 94/218 (43%), Gaps = 3/218 (1%)
Query: 24 RQVEKAYKIVEK--MRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAA 81
R + +A ++ E + D PD +YT+++ G+ A V + M + G P
Sbjct: 131 RVMARAGRLAEASALLDAAPGPDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIV 190
Query: 82 AYNAAIRNYC-IAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCR 140
YN + Y +A ++ L+ M E G++P+ TYN + + ++
Sbjct: 191 TYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDE 250
Query: 141 MMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGK 200
M +G P+ + L+ + + + + A+++ +M G ++ + L G
Sbjct: 251 MKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGL 310
Query: 201 LVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEA 238
L +A EM KG KP V++ + + ++ A K +A
Sbjct: 311 LEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDA 348
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 50/251 (19%), Positives = 90/251 (35%), Gaps = 36/251 (14%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISP----------------- 43
M E KPD SY+ L+ Y ++++K + + + E I P
Sbjct: 496 MEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNN 555
Query: 44 ------------------DVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNA 85
D+ +++ G K +L MKE AA YN+
Sbjct: 556 LAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNS 615
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
+ Y ++ E+ G+ P+ +YN + ++ + L+ M +G
Sbjct: 616 LMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSG 675
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
P+ + VK E A++L MV +G + + + C GKL +A
Sbjct: 676 LKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDA- 734
Query: 206 KSFLEMIEKGH 216
K F+ + + H
Sbjct: 735 KIFVSNLPQLH 745
>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 634
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 127/261 (48%), Gaps = 4/261 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E + P++V++N LID + K+ + +A K+ + M I PD+ +Y S++ G + +
Sbjct: 321 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDR 380
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA+ + + M C+PD YN I+ +C +KR+ D + L EM +GL + TY
Sbjct: 381 LDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 440
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + D ++ ++ +M+ G P+ + L+ K+E AL++++ M +
Sbjct: 441 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 500
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
I + + + +C GK+ + F + KG KP+ V++ I L QEA
Sbjct: 501 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAY 560
Query: 240 QNLSNKMALFGPSMIPKREEY 260
L KM GP +P Y
Sbjct: 561 A-LLKKMKEDGP--LPNSGTY 578
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 108/223 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++ D+V +N +ID CK R V+ A + ++M + I P+V++Y+S+I L G+
Sbjct: 251 MEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGR 310
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +L +M E P+ +NA I + + +A L D+M+++ + P+ TYN
Sbjct: 311 WSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNS 370
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + L + ++ M+ C P+ + L+K + ++VE +L+ +M +G
Sbjct: 371 LVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRG 430
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ L L G A+K F +M+ G P +++
Sbjct: 431 LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTY 473
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 105/226 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++G +P IV+ + L++ YC +++ A +V++M + PD I++T++I GL L +
Sbjct: 146 MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 205
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++ M + GC P+ Y + C A L+++M + + +N
Sbjct: 206 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNT 265
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + NL+ M G PN + L+ + A QL +DM+EK
Sbjct: 266 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 325
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ + L D GK VEAEK + +MI++ P ++ +
Sbjct: 326 INPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSL 371
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 111/239 (46%), Gaps = 3/239 (1%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P IV +N L+ K ++ + + EKM+ +I + +Y +I Q A +
Sbjct: 83 PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALAL 142
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L +M + G P ++ + YC KR+ DA L+D+MVE G P+ T+ +
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYIL 186
N + L RM+ GC PN + +V LCKR + ++AL L N M + ++
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD-TDLALNLLNKMEAAKIEADVV 261
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLSN 244
+ + + D LC + +A F EM KG +P+ V++ I L +A Q LS+
Sbjct: 262 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 320
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 104/226 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G +P++V+Y +++ CK + A ++ KM I DV+ + +II L
Sbjct: 216 MVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRH 275
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A ++ KEM+ G P+ Y++ I C R DAS L+ +M+EK ++PN T+N
Sbjct: 276 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA 335
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + LY M+ P+ + LV ++++ A Q++ MV K
Sbjct: 336 LIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKD 395
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ + L C ++ + + F EM +G V++ +
Sbjct: 396 CFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 441
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 103/227 (45%), Gaps = 2/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ + + + +YN LI+ +C+ Q+ A ++ KM P +++ +S++ G +
Sbjct: 111 MQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR 170
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A ++ +M E G PD + I + + +A L+D MV++G PN TY +
Sbjct: 171 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 230
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEK 179
D + NL +M + ++ LCK + V+ AL L+ +M K
Sbjct: 231 VVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRH-VDDALNLFKEMETK 289
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G ++ L LC G+ +A + +MIEK P+ V+F +
Sbjct: 290 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNAL 336
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 74/144 (51%), Gaps = 5/144 (3%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV PDI++Y+ L+D C + ++EKA ++ + M+ +I D+ YT++I G+ G+ D
Sbjct: 465 GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDG 524
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
D+ + G P+ YN I C + L++A L+ +M E G PN+ TYN R
Sbjct: 525 WDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRA 584
Query: 125 FYWSNDLRSSWNLY-----CRMMG 143
D +S L CR +G
Sbjct: 585 HLRDGDKAASAELIREMRSCRFVG 608
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 104/244 (42%), Gaps = 47/244 (19%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD+V+YN LI +CK ++VE ++ +M + D ++YT++I GL G D A+ V
Sbjct: 398 PDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 457
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMD---------------EMVE---- 108
K+M G PD Y+ + C +L A + D M+E
Sbjct: 458 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 517
Query: 109 ----------------KGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS 152
KG+ PN TYN L+ ++ L +M G LPN+ +
Sbjct: 518 AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGT 577
Query: 153 CMFLVKLCKRQEKVEIALQLWNDMVEKGF----GSYILVSDVLFDLLCDMGKLVEAEKSF 208
L++ R + +L +M F + LV+++L D G+L +KSF
Sbjct: 578 YNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHD-----GRL---DKSF 629
Query: 209 LEMI 212
L+M+
Sbjct: 630 LDML 633
Score = 43.9 bits (102), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 73/177 (41%), Gaps = 2/177 (1%)
Query: 80 AAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYC 139
+ Y +RN +L DA GL MV+ P+ +N +L
Sbjct: 50 SGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGE 109
Query: 140 RMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMG 199
+M + + L+ R+ ++ +AL L M++ G+ I+ L + C
Sbjct: 110 KMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGK 169
Query: 200 KLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFG--PSMI 254
++ +A +M+E G++P ++F + + L NK L ++M G P+++
Sbjct: 170 RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLV 226
>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Glycine max]
Length = 623
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 112/223 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +GVKP++V+YN +I +C + ++A I + M+D+ + PD +Y S I GL G+
Sbjct: 242 METLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGR 301
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A ++ +M E G P+A YNA I YC L A DEM+ KG+ + TYNL
Sbjct: 302 LEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNL 361
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + + + N+ M G +P+ + L+ R + A L ++MV KG
Sbjct: 362 FIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKG 421
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ L +L ++ EA+ F ++ ++G P + F
Sbjct: 422 IQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVF 464
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 124/246 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M M ++ + ++N +I+V CK+ +++KA + + M + P+V++Y +II G L G+
Sbjct: 207 MFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGK 266
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR + + MK+ G PD YN+ I C RL +ASGL+ +M+E GL PNA TYN
Sbjct: 267 FQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNA 326
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ DL ++ M+ G + + + + + ++ A + +M EKG
Sbjct: 327 LIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKG 386
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ ++L + C G A EM+ KG +P+ V++ + ++ N+ +
Sbjct: 387 MMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEAD 446
Query: 241 NLSNKM 246
L +K+
Sbjct: 447 ALFSKI 452
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 116/238 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MRE G+ PD V++N LI+ YC+ ++A+ ++++M + I P +++YTS+I LG +
Sbjct: 382 MREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNR 441
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + ++++ G PD +NA I +C + A L+ EM + P+ TYN
Sbjct: 442 MKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNT 501
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + + L M G P+ S L+ ++ ++ A ++ ++M+ G
Sbjct: 502 LMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTG 561
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEA 238
F IL + L LC + AE+ EM+ KG P ++ I ME + E
Sbjct: 562 FDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSIIEAMETVDDLEG 619
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 106/222 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
++E G P+I + N ++ ++ K + + A+ + +M +I + ++ +I L G+
Sbjct: 172 IKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMFRMNIRSSLYTFNIMINVLCKEGK 231
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA++ + M+ G P+ YN I +C+ + + A + M +KGL P+ TYN
Sbjct: 232 LKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNS 291
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F L + L C+M+ G +PN + L+ + ++ A ++M+ KG
Sbjct: 292 FISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKG 351
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
+ ++ ++ L G++ +A+ EM EKG P V+
Sbjct: 352 IMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVT 393
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 130/306 (42%), Gaps = 41/306 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAY------------------------------ 30
M E G+ P+ V+YN LID YC ++KAY
Sbjct: 312 MLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGR 371
Query: 31 -----KIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNA 85
++++MR++ + PD +++ +I G G +A +L EM G P Y +
Sbjct: 372 MGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTS 431
Query: 86 AIRNYCIAK--RLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMG 143
I Y + K R+++A L ++ ++GL P+ +N + ++ ++ L M
Sbjct: 432 LI--YVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDN 489
Query: 144 TGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVE 203
LP+ + L++ R+ KVE A QL ++M +G + + L G + +
Sbjct: 490 MKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKD 549
Query: 204 AEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFGPSMIPKREEYLAE 263
A + EM+ G P+ +++ + + + E + L +M G + P YL+
Sbjct: 550 AFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKG--ITPDDSTYLSI 607
Query: 264 MSASDS 269
+ A ++
Sbjct: 608 IEAMET 613
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 88/212 (41%), Gaps = 2/212 (0%)
Query: 13 YNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMK 72
++ L+ YC+ ++ +A + ++++ P++ + ++ + + A + EM
Sbjct: 149 FDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMF 208
Query: 73 EYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLR 132
+N I C +L+ A + M G+ PN TYN +
Sbjct: 209 RMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQ 268
Query: 133 SSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVL 191
+ ++ M G P+ + F+ LCK + ++E A L M+E G + + L
Sbjct: 269 RARVIFQTMKDKGLEPDCYTYNSFISGLCK-EGRLEEASGLICKMLEGGLVPNAVTYNAL 327
Query: 192 FDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
D C+ G L +A EMI KG S V++
Sbjct: 328 IDGYCNKGDLDKAYAYRDEMISKGIMASLVTY 359
>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
Length = 602
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 109/226 (48%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PD+V+YN L++ CK R +A ++++ MR E +P+ ++Y ++ G+ G D A
Sbjct: 197 GCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDA 256
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++L+ + +GC P YN ++ C A+R DA L+ EM+ + PN T+N+
Sbjct: 257 LELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYS 316
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
L+ + L +M GC N + ++ Q V+ A+ L + M G
Sbjct: 317 LCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPD 376
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALM 230
I+ + L LC + V+AE+ M + G P V+F + +
Sbjct: 377 IVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFL 422
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 110/219 (50%), Gaps = 1/219 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P+ ++N +I C+ +++A +++EKM + ++++Y +II GL D A +
Sbjct: 305 PNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGL 364
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L +MK YGC PD YN ++ C A + DA LMD M + G P+ T+N
Sbjct: 365 LSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQ 424
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ + ++ +M GC PN+ + ++ + K++ AL+L+N+M KGF +
Sbjct: 425 KGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDK-I 483
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+L + L D + EA ++ ++ + G P V + I
Sbjct: 484 YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAI 522
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 121/251 (48%), Gaps = 2/251 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G P+ V+YN L+D C + V+ A +++ + P ++Y +++ GL +
Sbjct: 228 MRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAER 287
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +++ EM C P+ A +N I + C L+ A L+++M + G + N TYN
Sbjct: 288 WGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNA 347
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
++ + L +M GC P+ + L+K LC + V+ A +L ++M +
Sbjct: 348 IINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVD-AEELMDNMTQN 406
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
G + + L LC G +V+A + F +M +KG P+ +++ I + + A K +
Sbjct: 407 GCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQA 466
Query: 240 QNLSNKMALFG 250
L N+M G
Sbjct: 467 LELFNEMGHKG 477
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 103/223 (46%), Gaps = 1/223 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G +IV+YN +I+ C+ R V+ A ++ KM+ PD+++Y +++ GL Q
Sbjct: 333 MSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQ 392
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +++ M + GC PD +N I C + DA + +M +KG +PN+ TY+
Sbjct: 393 WVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYST 452
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L + L+ M G P+ + L + + +E A+Q + + G
Sbjct: 453 IISGLAKATKLDQALELFNEMGHKGFNPD-KIYQLLAECLNDDDTIEEAIQTVRKLQDSG 511
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ ++ + + LC GK A M+ G P +++
Sbjct: 512 ISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTY 554
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 111/239 (46%), Gaps = 2/239 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G KP V+YN ++ C + A ++V +M E+ P+ ++ +I L G +A
Sbjct: 267 GCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQA 326
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+L++M ++GC + YNA I C + + A GL+ +M G P+ TYN +
Sbjct: 327 IQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKG 386
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGS 183
+ + L M GCLP+ + L+ LC++ V+ A++++ M +KG
Sbjct: 387 LCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVD-AIEVFKQMPDKGCTP 445
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNL 242
+ + L KL +A + F EM KG P ++ + L + +EA+Q +
Sbjct: 446 NSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKIYQLLAECLNDDDTIEEAIQTV 504
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 109/247 (44%), Gaps = 5/247 (2%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G +V+Y L D YC+ ++ A ++V M + P+ +Y +I L GQ A
Sbjct: 130 GPAATVVAYGALTDGYCRAGRLGDARRVVGGM---PVQPNAYTYNPLIHTLCERGQVRDA 186
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
VL +M GC PD YN + C + R A L+D M +G +PN TYN+
Sbjct: 187 LSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDG 246
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
D+ + L + GC P+T + ++K E+ A +L +M+ +
Sbjct: 247 MCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPN 306
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLS 243
+V+ LC G L +A + +M + G + V++ I L E N A+ LS
Sbjct: 307 EATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLS 366
Query: 244 NKMALFG 250
KM +G
Sbjct: 367 -KMKSYG 372
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 71/184 (38%), Gaps = 34/184 (18%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G PD V++N LI C+ + A ++ ++M D+ +P+ I+Y++II GL +
Sbjct: 403 MTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATK 462
Query: 61 PDKARDVLKEMKEYGCYPD----------------------------------AAAYNAA 86
D+A ++ EM G PD YNA
Sbjct: 463 LDQALELFNEMGHKGFNPDKIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAI 522
Query: 87 IRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGC 146
+ C + A +M MV G P+ TY + + L + L ++
Sbjct: 523 LLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKLCSRDV 582
Query: 147 LPNT 150
L N+
Sbjct: 583 LVNS 586
>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
Length = 585
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 111/224 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + +PD+V Y +ID CKDRQV +A+ + KM + ISPD+ +YTS+I L + +
Sbjct: 198 MEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCE 257
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+L +M PD ++ + C ++ +A ++D M+ +G+ PN TYN
Sbjct: 258 WKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNA 317
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+++ + ++ M+ G PN S L+ + ++++ A L+ +M +K
Sbjct: 318 LMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKE 377
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
+ + L LC +G+L +A F EM+ G P ++R
Sbjct: 378 LIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYR 421
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 120/244 (49%), Gaps = 1/244 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV+P++V+YN L+D +C ++++A K+ + M +P+VISY ++I G + + DKA
Sbjct: 307 GVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKA 366
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ +EM + P+ YN + C RL+DA L EMV G P+ TY +
Sbjct: 367 TYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDY 426
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ L + L + G+ P+ Q ++ R ++E A +++++ KG
Sbjct: 427 LCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPN 486
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI-KALMELANKQEALQNLS 243
+ ++ + LC G L EA K F+EM G P ++ I + L++ A+Q L
Sbjct: 487 VRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQ 546
Query: 244 NKMA 247
+A
Sbjct: 547 EMLA 550
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 108/245 (44%), Gaps = 36/245 (14%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P+++SYN LI+ YCK ++++KA + E+M +++ P+ ++Y +++ GL VG+
Sbjct: 338 MVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGR 397
Query: 61 PDKARDVLKEMKEYGCYPDAAAY-----------------------------------NA 85
A + EM +G PD A Y
Sbjct: 398 LQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTI 457
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
I C A L A + + KGL PN TY + L + L+ M G G
Sbjct: 458 VIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNG 517
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
C P+ + + + + ++ A+QL +M+ +GF + + + +L ++LCD KL ++
Sbjct: 518 CSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCD-DKLDQSV 576
Query: 206 KSFLE 210
K L
Sbjct: 577 KQILS 581
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 108/267 (40%), Gaps = 40/267 (14%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M M P V +N L+ K +Q + + +M I PDV + +I + +
Sbjct: 58 MLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNR 117
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
P A VL ++ + G PD A + IR C+ ++ DA L D+M+ +G PN TY
Sbjct: 118 PGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGT 177
Query: 121 FFR---------------------------VFYWS--------NDLRSSWNLYCRMMGTG 145
V Y S + ++NL+ +M+G G
Sbjct: 178 LINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQG 237
Query: 146 CLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEA 204
P+ + L+ LC E + L N M+ +++ + D LC GK+ EA
Sbjct: 238 ISPDIFTYTSLIHSLCNLCEWKHVT-TLLNQMINSKIMPDVVIFSTVVDALCKEGKITEA 296
Query: 205 EKSFLEMIEKGHKPSQVSFRRIKALME 231
MI +G +P+ V++ ALM+
Sbjct: 297 HDVVDMMIIRGVEPNVVTY---NALMD 320
>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
Length = 596
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 127/261 (48%), Gaps = 4/261 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E + P++V++N LID + K+ + +A K+ + M I PD+ +Y S++ G + +
Sbjct: 283 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDR 342
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA+ + + M C+PD YN I+ +C +KR+ D + L EM +GL + TY
Sbjct: 343 LDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 402
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + D ++ ++ +M+ G P+ + L+ K+E AL++++ M +
Sbjct: 403 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 462
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
I + + + +C GK+ + F + KG KP+ V++ I L QEA
Sbjct: 463 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAY 522
Query: 240 QNLSNKMALFGPSMIPKREEY 260
L KM GP +P Y
Sbjct: 523 A-LLKKMKEDGP--LPNSGTY 540
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 108/223 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++ D+V +N +ID CK R V+ A + ++M + I P+V++Y+S+I L G+
Sbjct: 213 MEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGR 272
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +L +M E P+ +NA I + + +A L D+M+++ + P+ TYN
Sbjct: 273 WSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNS 332
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + L + ++ M+ C P+ + L+K + ++VE +L+ +M +G
Sbjct: 333 LVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRG 392
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ L L G A+K F +M+ G P +++
Sbjct: 393 LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTY 435
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 105/226 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++G +P IV+ + L++ YC +++ A +V++M + PD I++T++I GL L +
Sbjct: 108 MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 167
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++ M + GC P+ Y + C A L+++M + + +N
Sbjct: 168 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNT 227
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + NL+ M G PN + L+ + A QL +DM+EK
Sbjct: 228 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 287
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ + L D GK VEAEK + +MI++ P ++ +
Sbjct: 288 INPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSL 333
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 111/239 (46%), Gaps = 3/239 (1%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P IV +N L+ K ++ + + EKM+ +I + +Y +I Q A +
Sbjct: 45 PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALAL 104
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L +M + G P ++ + YC KR+ DA L+D+MVE G P+ T+ +
Sbjct: 105 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 164
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYIL 186
N + L RM+ GC PN + +V LCKR + ++AL L N M + ++
Sbjct: 165 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD-TDLALNLLNKMEAAKIEADVV 223
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLSN 244
+ + + D LC + +A F EM KG +P+ V++ I L +A Q LS+
Sbjct: 224 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 282
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 104/226 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G +P++V+Y +++ CK + A ++ KM I DV+ + +II L
Sbjct: 178 MVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRH 237
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A ++ KEM+ G P+ Y++ I C R DAS L+ +M+EK ++PN T+N
Sbjct: 238 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA 297
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + LY M+ P+ + LV ++++ A Q++ MV K
Sbjct: 298 LIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKD 357
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ + L C ++ + + F EM +G V++ +
Sbjct: 358 CFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 403
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 103/227 (45%), Gaps = 2/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ + + + +YN LI+ +C+ Q+ A ++ KM P +++ +S++ G +
Sbjct: 73 MQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR 132
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A ++ +M E G PD + I + + +A L+D MV++G PN TY +
Sbjct: 133 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 192
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEK 179
D + NL +M + ++ LCK + V+ AL L+ +M K
Sbjct: 193 VVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRH-VDDALNLFKEMETK 251
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G ++ L LC G+ +A + +MIEK P+ V+F +
Sbjct: 252 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNAL 298
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 74/144 (51%), Gaps = 5/144 (3%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV PDI++Y+ L+D C + ++EKA ++ + M+ +I D+ YT++I G+ G+ D
Sbjct: 427 GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDG 486
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
D+ + G P+ YN I C + L++A L+ +M E G PN+ TYN R
Sbjct: 487 WDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRA 546
Query: 125 FYWSNDLRSSWNLY-----CRMMG 143
D +S L CR +G
Sbjct: 547 HLRDGDKAASAELIREMRSCRFVG 570
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 104/244 (42%), Gaps = 47/244 (19%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD+V+YN LI +CK ++VE ++ +M + D ++YT++I GL G D A+ V
Sbjct: 360 PDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 419
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMD---------------EMVE---- 108
K+M G PD Y+ + C +L A + D M+E
Sbjct: 420 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 479
Query: 109 ----------------KGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS 152
KG+ PN TYN L+ ++ L +M G LPN+ +
Sbjct: 480 AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGT 539
Query: 153 CMFLVKLCKRQEKVEIALQLWNDMVEKGF----GSYILVSDVLFDLLCDMGKLVEAEKSF 208
L++ R + +L +M F + LV+++L D G+L +KSF
Sbjct: 540 YNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHD-----GRL---DKSF 591
Query: 209 LEMI 212
L+M+
Sbjct: 592 LDML 595
Score = 43.9 bits (102), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 73/177 (41%), Gaps = 2/177 (1%)
Query: 80 AAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYC 139
+ Y +RN +L DA GL MV+ P+ +N +L
Sbjct: 12 SGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGE 71
Query: 140 RMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMG 199
+M + + L+ R+ ++ +AL L M++ G+ I+ L + C
Sbjct: 72 KMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGK 131
Query: 200 KLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFG--PSMI 254
++ +A +M+E G++P ++F + + L NK L ++M G P+++
Sbjct: 132 RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLV 188
>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
Length = 791
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 116/242 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ PD+V+YN +I CK + ++KA +++ M + PD ++Y SI+ G GQ
Sbjct: 222 MLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQ 281
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
P +A LK+M+ G PD Y+ + C R +A + D M ++GL P TTY
Sbjct: 282 PKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGT 341
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + L L M+ G P+ L+ Q KV+ A+ +++ M ++G
Sbjct: 342 LLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQG 401
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ + +LC G++ +A F +MI++G P + + + + NK E +
Sbjct: 402 LNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAE 461
Query: 241 NL 242
L
Sbjct: 462 EL 463
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 119/245 (48%), Gaps = 1/245 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G+ P+ V+Y +I + CK +VE A E+M DE +SP I Y S+I GL +
Sbjct: 397 MRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNK 456
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A +++ EM + G + +N+ I ++C R+ ++ L + MV G+ PN TYN
Sbjct: 457 WERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNT 516
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + + L M+ G PNT + L+ + ++E AL L+ +M G
Sbjct: 517 LINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSG 576
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI-KALMELANKQEAL 239
I+ +++ L + A++ ++ + E G + ++ I L + +AL
Sbjct: 577 VSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDAL 636
Query: 240 QNLSN 244
Q N
Sbjct: 637 QMFQN 641
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 112/226 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV PD ++YN ++ YC Q ++A ++KMR + + PDV++Y+ ++ L G+
Sbjct: 257 MVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGR 316
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR + M + G P+ Y ++ Y L + GL+D MV G+ P+ +++
Sbjct: 317 CMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSI 376
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + ++ +M G PN + ++ + + +VE A+ + M+++G
Sbjct: 377 LICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEG 436
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+V + L LC K AE+ LEM+++G + + F I
Sbjct: 437 LSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSI 482
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 104/227 (45%), Gaps = 5/227 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDE---DISPDVISYTSIIGGLGL 57
M E+G P++ SYN L+ C + + ++A +++ M D+ PDV+SYT++I G
Sbjct: 149 MTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFK 208
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
G DKA EM + G PD YN+ I C A+ + A +++ MV+ G+ P+ T
Sbjct: 209 EGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMT 268
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDM 176
YN + S + + +M G P+ + L+ LCK +E A ++++ M
Sbjct: 269 YNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCME-ARKIFDSM 327
Query: 177 VEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++G I L G LVE M+ G P F
Sbjct: 328 TKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVF 374
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 122/253 (48%), Gaps = 6/253 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR GV+PD+V+Y+ L+D CK+ + +A KI + M + P++ +Y +++ G G
Sbjct: 292 MRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGA 351
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ +L M G +PD ++ I Y ++ A + +M ++GL+PNA TY
Sbjct: 352 LVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGA 411
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNT---QSCMFLVKLCKRQEKVEIALQLWNDMV 177
+ S + + + +M+ G P S + + C + E+ E +L +M+
Sbjct: 412 VIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAE---ELILEML 468
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQE 237
++G + + + D C G+++E+EK F M+ G KP+ +++ + LA K +
Sbjct: 469 DRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMD 528
Query: 238 ALQNLSNKMALFG 250
L + M G
Sbjct: 529 EAMKLLSGMVSVG 541
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 110/258 (42%), Gaps = 41/258 (15%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
V PD+ +Y LI C+ +++ + + + + D I++T ++ GL + A
Sbjct: 83 VTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAM 142
Query: 66 D-VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEK---GLSPNATTYNLF 121
D VL+ M E GC P+ +YN ++ C R ++A L+ M + G P+ +Y
Sbjct: 143 DIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTV 202
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F+ D +++ Y M+ G LP+ + + LCK Q ++ A+++ N MV+ G
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQ-AMDKAMEVLNTMVKNG 261
Query: 181 -----------FGSY------------------------ILVSDVLFDLLCDMGKLVEAE 205
Y ++ +L D LC G+ +EA
Sbjct: 262 VMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEAR 321
Query: 206 KSFLEMIEKGHKPSQVSF 223
K F M ++G KP ++
Sbjct: 322 KIFDSMTKRGLKPEITTY 339
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 102/252 (40%), Gaps = 43/252 (17%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G+KP+ V+Y+ LI+ YCK ++E A + ++M +SPD+I+Y I+ GL +
Sbjct: 537 MVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRR 596
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASG------LMDEMVE------ 108
A+++ + E G + + YN + C K DA LMD +E
Sbjct: 597 TAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNI 656
Query: 109 -----------------------KGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
GL PN TY L L L+ M G
Sbjct: 657 MIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNG 716
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGK----- 200
C ++ F+V+ ++ ++ A + + EK F + + DLL GK
Sbjct: 717 CTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSG-GKYQEYY 775
Query: 201 --LVEAEKSFLE 210
L E KSF+E
Sbjct: 776 RFLPEKYKSFIE 787
>gi|255555533|ref|XP_002518803.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542184|gb|EEF43728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 775
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 108/215 (50%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ + +YN +I CK+ + A + +M+ ++PD+++Y S+I G G +G D++
Sbjct: 247 GIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGKLGLLDES 306
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ +EMK+ GC PD YNA I +C +++ A + EM GL PN TY+
Sbjct: 307 FCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDA 366
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ L+ + M G PN + L+ + + AL+L ++M++ G
Sbjct: 367 LCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFN 426
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
++ L D LC G+++EAE F MI+ G P+
Sbjct: 427 VVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPN 461
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 124/251 (49%), Gaps = 2/251 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+++G +PD+++YN LI+ +CK Q+ KA+ + +M++ + P+V++Y+++I L
Sbjct: 313 MKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHM 372
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A L +M+ G P+ Y + I C A L DA L DEM++ + N TY
Sbjct: 373 LQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVVTYTT 432
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + +L+ M+ G PN ++ LV + ++VE AL+L ++ EK
Sbjct: 433 LLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALELLKEIKEKK 492
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEAL 239
+L+ + LC KL E E EM G + + V + R+ A + EAL
Sbjct: 493 IKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEAL 552
Query: 240 QNLSNKMALFG 250
NL +M G
Sbjct: 553 -NLLQEMCDLG 562
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 89/219 (40%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P ++ L V+ + +E+A + +M + P S + + L G+ D +
Sbjct: 180 PGFGVFDALFSVFIELGMLEEAGQCFSRMTRFRVFPKARSCNAFLYRLAKTGKGDLSNKF 239
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
++M G YN I C + A L +M + GL+P+ TYN +
Sbjct: 240 FRDMVGAGIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGK 299
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
L S+ L+ M GC P+ + L+ + E++ A ++M G ++
Sbjct: 300 LGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVT 359
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
L D LC L +A K L+M G P++ ++ +
Sbjct: 360 YSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSL 398
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 78/181 (43%), Gaps = 1/181 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G++ + V Y +D Y K + +A ++++M D + ++++ +I GL G
Sbjct: 523 MKACGIRANSVIYTIRMDAYFKTGKTVEALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGL 582
Query: 61 PDKARDVLKEMKEYGCYPDAAAY-NAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
++A D M ++ P+ A A I C + A L DEM +K + P+ Y
Sbjct: 583 VEEAIDYFARMADFNLQPNNVAVCTALIDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYT 642
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
D + + N+ RM G + + LV + V+ A N+M+ K
Sbjct: 643 ALIDGNLKHKDFQEALNIRSRMSELGMELDLHAYTSLVWGLSQGNLVQQARMFLNEMIGK 702
Query: 180 G 180
G
Sbjct: 703 G 703
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 65/127 (51%), Gaps = 1/127 (0%)
Query: 1 MREMGVKPDIVSY-NCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVG 59
M + ++P+ V+ LID CK+ +E A K+ ++M+D+++ PD I+YT++I G
Sbjct: 593 MADFNLQPNNVAVCTALIDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHK 652
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+A ++ M E G D AY + + ++ A ++EM+ KG+ P+
Sbjct: 653 DFQEALNIRSRMSELGMELDLHAYTSLVWGLSQGNLVQQARMFLNEMIGKGIVPDEILCI 712
Query: 120 LFFRVFY 126
R +Y
Sbjct: 713 RLLRKYY 719
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 115/252 (45%), Gaps = 38/252 (15%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV P++ +Y L+ + K+++VE A +++++++++ I PD++ Y +II GL +
Sbjct: 453 MIKAGVTPNLKTYTALVHGHIKNKRVENALELLKEIKEKKIKPDLLLYGTIIWGLCSQNK 512
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++ V+ EMK G ++ Y + Y + +A L+ EM + G+ T+
Sbjct: 513 LEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALNLLQEMCDLGVEVTIVTF-- 570
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
C+ + LCK+ VE A+ + M +
Sbjct: 571 --------------------------------CVLIDGLCKKG-LVEEAIDYFARMADFN 597
Query: 181 FG-SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEA 238
+ + V L D LC + A+K F EM +K P ++++ I ++ + QEA
Sbjct: 598 LQPNNVAVCTALIDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEA 657
Query: 239 LQNLSNKMALFG 250
L N+ ++M+ G
Sbjct: 658 L-NIRSRMSELG 668
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 54/109 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ + PD ++Y LID K + ++A I +M + + D+ +YTS++ GL
Sbjct: 629 MQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRMSELGMELDLHAYTSLVWGLSQGNL 688
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEK 109
+AR L EM G PD +R Y + +A L DE+++K
Sbjct: 689 VQQARMFLNEMIGKGIVPDEILCIRLLRKYYELGSIDEAIELHDELLKK 737
>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
Length = 426
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 122/227 (53%), Gaps = 8/227 (3%)
Query: 1 MREMGVK---PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGL 57
MR+M ++ P+++++ +IDV+ K+ + +A K+ E+M + PDV +Y S+I GL +
Sbjct: 173 MRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCM 232
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
G+ D+A+ +L M GC PD YN I +C +KR+ + + L EM ++GL + T
Sbjct: 233 HGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTIT 292
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDM 176
YN + ++ + ++ ++ RM PN ++ + L LC +VE AL L+ +M
Sbjct: 293 YNTIIQGYFQAGRPDAAQEIFSRM---DSRPNIRTYSILLYGLCMNW-RVEKALVLFENM 348
Query: 177 VEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ I +++ +C +G + +A F + KG KP VS+
Sbjct: 349 QKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSY 395
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 116/246 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G +PD+V+ + LI+ +C+ +V A +V KM + PDV+ Y +II G +G
Sbjct: 71 MMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGL 130
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A ++ M+ G DA YN+ + C + R DA+ LM +MV + + PN T+
Sbjct: 131 VNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTA 190
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
VF + LY M P+ + L+ +V+ A Q+ + MV KG
Sbjct: 191 VIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKG 250
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
++ + L + C ++ E K F EM ++G +++ I A + +A Q
Sbjct: 251 CLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQ 310
Query: 241 NLSNKM 246
+ ++M
Sbjct: 311 EIFSRM 316
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 103/226 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ D+ SYN +I+ C+ + A +V KM PDV++ +S+I G +
Sbjct: 36 MEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNR 95
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A D++ +M+E G PD YN I C + DA L D M G+ +A TYN
Sbjct: 96 VFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNS 155
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
S + L M+ +PN + ++ + ++ K A++L+ +M +
Sbjct: 156 LVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRC 215
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + L + LC G++ EA++ M+ KG P V++ +
Sbjct: 216 VDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTL 261
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 87/181 (48%), Gaps = 3/181 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD+V+YN LI+ +CK ++V++ K+ +M + D I+Y +II G G+
Sbjct: 246 MVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGR 305
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
PD A+++ M P+ Y+ + C+ R+ A L + M + + + TTYN+
Sbjct: 306 PDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNI 362
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++ +W+L+ + G P+ S ++ R+ + + + L+ M E G
Sbjct: 363 VIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDG 422
Query: 181 F 181
Sbjct: 423 L 423
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 57/111 (51%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
M +P+I +Y+ L+ C + +VEKA + E M+ +I D+ +Y +I G+ +G +
Sbjct: 315 RMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVE 374
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSP 113
A D+ + + G PD +Y I +C ++ + L +M E GL P
Sbjct: 375 DAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 425
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 92/236 (38%), Gaps = 1/236 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P IV ++ ++ K + + + M I D+ SY +I L + A V
Sbjct: 8 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 67
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
+ +M ++G PD ++ I +C R+ DA L+ +M E G P+ YN
Sbjct: 68 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 127
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ + L+ RM G + + LV + A +L DMV + ++
Sbjct: 128 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 187
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNL 242
+ D+ GK EA K + EM + P ++ I L EA Q L
Sbjct: 188 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQML 243
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 45/78 (57%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ ++ DI +YN +I CK VE A+ + + + + PDV+SYT++I G Q
Sbjct: 348 MQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQ 407
Query: 61 PDKARDVLKEMKEYGCYP 78
DK+ + ++M+E G P
Sbjct: 408 WDKSDLLYRKMQEDGLLP 425
>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
Length = 878
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 113/223 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ PD+V+Y+ +I CK + ++KA +++ M + PD ++Y SI+ G GQ
Sbjct: 227 MLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQ 286
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
P +A LK+M+ G P+ Y++ + C R +A + D M ++GL P+ TY
Sbjct: 287 PKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRT 346
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + L L M+ G P+ L+ +QEKV+ A+ +++ M + G
Sbjct: 347 LLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHG 406
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + D+LC G + +A F +MI++G P+ + +
Sbjct: 407 LNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVY 449
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 112/226 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV PD ++YN ++ YC Q ++A ++KMR + + P+V++Y+S++ L G+
Sbjct: 262 MVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGR 321
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR + M + G PD A Y ++ Y L + L+D MV G+ P+ +N+
Sbjct: 322 STEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNI 381
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + ++ +M G PN ++ + + V+ A+ + M+++G
Sbjct: 382 LICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEG 441
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
I+V L LC K +AE+ LEM+++G + + F I
Sbjct: 442 LTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSI 487
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 110/215 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G+ P++V Y +IDV CK V+ A E+M DE ++P++I YTS+I GL +
Sbjct: 402 MRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDK 461
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA +++ EM + G + +N+ I ++C R+ ++ L D MV G+ P+ TYN
Sbjct: 462 WDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNT 521
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + L M+ G P+ + L+ R +++ AL L+ +MV G
Sbjct: 522 LIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSG 581
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
I+ +++ L + A++ ++ + + G
Sbjct: 582 VSPNIITYNIILQGLFHTRRTAAAKELYVSITKSG 616
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 103/227 (45%), Gaps = 5/227 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDE---DISPDVISYTSIIGGLGL 57
M E+G PD+ SYN L+ C + + ++A +++ M D+ PDV+SY +++ G
Sbjct: 154 MTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFK 213
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
G DKA EM + G PD Y++ I C A+ + A +++ MV+ G+ P+ T
Sbjct: 214 EGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMT 273
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDM 176
YN + S + + +M G PN + L+ LCK E A ++++ M
Sbjct: 274 YNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTE-ARKIFDSM 332
Query: 177 VEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++G I L G LVE M+ G +P F
Sbjct: 333 TKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVF 379
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 111/258 (43%), Gaps = 35/258 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVG- 59
MR GV+P++V+Y+ L++ CK+ + +A KI + M + PD+ +Y +++ G G
Sbjct: 297 MRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGA 356
Query: 60 ----------------QPD------------------KARDVLKEMKEYGCYPDAAAYNA 85
QPD +A V +M+++G P+ Y
Sbjct: 357 LVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGT 416
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
I C + + DA ++M+++GL+PN Y + + L M+ G
Sbjct: 417 VIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRG 476
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
NT ++ ++ +V + +L++ MV G I+ + L D C GK+ EA
Sbjct: 477 ICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEAT 536
Query: 206 KSFLEMIEKGHKPSQVSF 223
K M+ G KP V++
Sbjct: 537 KLLASMVSVGVKPDIVTY 554
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 105/223 (47%), Gaps = 6/223 (2%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
V P + +Y LI C+ +++ + + + + D I++T ++ GL + A
Sbjct: 88 VTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAM 147
Query: 66 D-VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEK---GLSPNATTYNLF 121
D VL+ M E GC PD +YN ++ C R ++A L+ M + G P+ +YN
Sbjct: 148 DIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTV 207
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F+ D +++ Y M+ G LP+ + + LCK Q ++ A+++ N MV+ G
Sbjct: 208 LNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQ-AMDKAMEVLNTMVKNG 266
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + + C G+ EA + +M G +P+ V++
Sbjct: 267 VMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTY 309
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +GVKPDI++YN LID C ++++A K++ M + PD+++Y ++I G V +
Sbjct: 507 MVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSR 566
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A + KEM G P+ YN ++ +R A L + + G +TYN+
Sbjct: 567 MDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNI 626
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+N + ++ + T T++ ++ + +++ A L+ G
Sbjct: 627 ILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANG 686
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
+ ++ + L + G L E + FL M E G
Sbjct: 687 LVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENG 721
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 101/226 (44%), Gaps = 4/226 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +GVKPDIV+Y LI+ YC+ +++ A + ++M +SP++I+Y I+ GL +
Sbjct: 542 MVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRR 601
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A+++ + + G + + YN + C +A + + L T+N+
Sbjct: 602 TAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNI 661
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + +L+ G +P+ ++ + + Q +E L+ M E G
Sbjct: 662 MIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENG 721
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGH---KPSQVSF 223
+ + + + L G + A ++L MI++ H + S SF
Sbjct: 722 CSADSRMLNSIVRKLLQRGDITRA-GTYLFMIDEKHFSLEASTASF 766
>gi|242038267|ref|XP_002466528.1| hypothetical protein SORBIDRAFT_01g009420 [Sorghum bicolor]
gi|241920382|gb|EER93526.1| hypothetical protein SORBIDRAFT_01g009420 [Sorghum bicolor]
Length = 595
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ V D+V++N L+ + D + E A+++ +M P+ +SYT++I GLG G+
Sbjct: 215 MKAADVALDVVAFNTLLAGFVADGRFEDAFELTGQMEQRGCPPNAVSYTTLIQGLGARGR 274
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A V EM+ GC PDA Y + +C A ++ +D + GL +A Y+
Sbjct: 275 VDEAMRVFVEMRRKGCAPDAVTYGTLVSTFCKAGKISQGYEFLDAISRDGLRVDAAVYHG 334
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
FF L L RM C P+ + +++L R + + A+ LWN+M G
Sbjct: 335 FFVAHEKKEQLEECLELMERMRECRCPPDLKIYNVVIRLACRLGETKQAMSLWNEMETGG 394
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
+ ++ + L G LVEA F +M+ +G
Sbjct: 395 LSPGVDTFAIMVNGLVGQGLLVEACSYFKDMVGRG 429
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 91/239 (38%), Gaps = 38/239 (15%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G++ D Y+ + K Q+E+ +++E+MR+ PD+ Y +
Sbjct: 324 GLRVDAAVYHGFFVAHEKKEQLEECLELMERMRECRCPPDLKIYNVV------------- 370
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
IR C + A L +EM GLSP T+ +
Sbjct: 371 ----------------------IRLACRLGETKQAMSLWNEMETGGLSPGVDTFAIMVNG 408
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMF--LVKLCKRQEKVEIALQLWNDMVEKGFG 182
L + + + M+G G Q + L+ R EK+E+A +W + KG
Sbjct: 409 LVGQGLLVEACSYFKDMVGRGLFVAPQYGVLKDLLNALVRDEKLELAKDVWECIASKGCE 468
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI-KALMELANKQEALQ 240
+ + L + EA L+M+E G P +F ++ K L +L N+Q A +
Sbjct: 469 LNVSAWTIWIHALYAKKHVKEACLYCLDMLEAGVMPQPDTFAKLMKGLKKLYNRQIAAE 527
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 82/181 (45%), Gaps = 16/181 (8%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MRE PD+ YN +I + C+ + ++A + +M +SP V ++ ++ GL G
Sbjct: 355 MRECRCPPDLKIYNVVIRLACRLGETKQAMSLWNEMETGGLSPGVDTFAIMVNGLVGQGL 414
Query: 61 PDKARDVLKEM--------KEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLS 112
+A K+M +YG D NA +R+ ++L A + + + KG
Sbjct: 415 LVEACSYFKDMVGRGLFVAPQYGVLKD--LLNALVRD----EKLELAKDVWECIASKGCE 468
Query: 113 PNATTYNLFFRVFYWSNDLRSSWNLYC-RMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQ 171
N + + ++ Y ++ + LYC M+ G +P + L+K K+ +IA +
Sbjct: 469 LNVSAWTIWIHALYAKKHVKEAC-LYCLDMLEAGVMPQPDTFAKLMKGLKKLYNRQIAAE 527
Query: 172 L 172
+
Sbjct: 528 I 528
>gi|302756535|ref|XP_002961691.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
gi|300170350|gb|EFJ36951.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
Length = 545
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 118/225 (52%), Gaps = 10/225 (4%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P+++SY +ID CK R+V+KA + ++M D+ I PDV++Y ++I GLG + +A D+
Sbjct: 203 PNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDL 262
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMV-EKGLSPNATTYNLFFRVFY 126
+E + GC+P YN I C R+ +A L D+MV E L P+ TY+
Sbjct: 263 FEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLN 322
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSY- 184
SN ++ LY M+ TGC P+ + L+ LCK + + A++++ M G G+
Sbjct: 323 LSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCE-DKAMEIFRKM---GVGNVC 378
Query: 185 ---ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ VL D C + +L +A K EM + P V+F +
Sbjct: 379 DPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTV 423
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 110/224 (49%), Gaps = 8/224 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+RE +KPD+ +Y+ LI+ + EKAY++ E+M D SPDV++Y +++ GL G
Sbjct: 302 VREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGC 361
Query: 61 PDKARDVLKEMKEYG-CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
DKA ++ ++M C P+ Y I +C RL DA L EM + L P+A T+
Sbjct: 362 EDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFT 421
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMF---LVKLCKRQEKVEIALQLWNDM 176
+ + + + L+ +G C P+ S +F L CK +++ A +L + M
Sbjct: 422 TVIQKLCKESRIDEAHELF-ESIGKTCKPD--SVLFNTMLAGYCK-ITRIDDAKKLHDRM 477
Query: 177 VEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQ 220
++ G + L C G+ +A + EMIE G P +
Sbjct: 478 LDSGCAPTLATYTALVTGFCRTGRYSDALIMYHEMIEMGFPPER 521
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 102/239 (42%), Gaps = 34/239 (14%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDI------------------------- 41
+PD VSYN L++ + K V+KA + +M+D I
Sbjct: 134 EPDEVSYNTLMNGFFKAGDVKKALALFGEMKDSGIAVLRSHNIVLRGLCSGGKISMAWEV 193
Query: 42 --------SPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIA 93
SP++ISYT +I GL + DKA + K+M + YPD Y A I
Sbjct: 194 FKDMSGIFSPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQ 253
Query: 94 KRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCL-PNTQS 152
+R+++A L +E KG P TYN + ++ LY M+ L P+ +
Sbjct: 254 RRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFT 313
Query: 153 CMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEM 211
L+ + E A +L+ +M++ G ++ + L D LC G +A + F +M
Sbjct: 314 YSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKM 372
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 104/234 (44%), Gaps = 3/234 (1%)
Query: 14 NCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKE 73
N L+ VY K R+VE A+ + PD +SY +++ G G KA + EMK+
Sbjct: 106 NNLLSVYVKARRVEDAHLFFQSHMKNVFEPDEVSYNTLMNGFFKAGDVKKALALFGEMKD 165
Query: 74 YGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRS 133
G ++N +R C ++ A + +M SPN +Y + S +
Sbjct: 166 SGIAV-LRSHNIVLRGLCSGGKISMAWEVFKDM-SGIFSPNLISYTIMIDGLCKSRKVDK 223
Query: 134 SWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFD 193
+ L+ +M+ P+ + L+ +Q +V+ A L+ + KG ++ + + D
Sbjct: 224 AITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMID 283
Query: 194 LLCDMGKLVEAEKSFLEMIEKGH-KPSQVSFRRIKALMELANKQEALQNLSNKM 246
LC G++ A + +M+ + H KP ++ + + L+N+ E L +M
Sbjct: 284 GLCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEM 337
>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
Length = 501
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 122/233 (52%), Gaps = 3/233 (1%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P+ V++ L+DV CK V +A + E M ++ + P++ +Y +++ G L + + A V
Sbjct: 189 PNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKV 248
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
+ M GC P +Y+ I YC ++R+ +A L+ +M EK L PN TYN +
Sbjct: 249 FEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCH 308
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
++ L + L+ +M +G LPN ++ + L LCK +E AL+L M E+ I+
Sbjct: 309 ASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGH-LEEALKLLTSMQERKLEPDIV 367
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEA 238
+ ++L + GKL A++ F ++ G +PS ++ IK L++ EA
Sbjct: 368 LYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEA 420
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 128/261 (49%), Gaps = 4/261 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++G++PD V++ LI+ C + ++++A ++ +M D P+ +++T ++ L G
Sbjct: 147 MFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAMPNTVTFTILVDVLCKKGM 206
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR V + M E G P+ YNA + YC+ + DAS + + MV KG +P+ +Y++
Sbjct: 207 VSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSI 266
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+ S + + L +M +PNT + L++ LC +E A +L+ M
Sbjct: 267 LINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLE-AQELFKKMCSS 325
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
G + +L D LC G L EA K M E+ +P V + + M +A K E
Sbjct: 326 GMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVA 385
Query: 240 QNLSNKMALFGPSMIPKREEY 260
+ L +K LF + P Y
Sbjct: 386 KELFSK--LFANGIRPSVRTY 404
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 112/241 (46%), Gaps = 1/241 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV + + N LI+ C+ + A ++ KM I PD +++T++I GL G+ +A
Sbjct: 116 GVAHNDYTLNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEA 175
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++ EM P+ + + C + +A + + M EKG+ PN TYN
Sbjct: 176 VELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNG 235
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ ++ + ++ M+G GC P+ S L+ + +++ A L M EK
Sbjct: 236 YCLRLEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPN 295
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEALQNLS 243
+ + L LC L+EA++ F +M G P+ ++ + L + + +EAL+ L+
Sbjct: 296 TVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLT 355
Query: 244 N 244
+
Sbjct: 356 S 356
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 93/177 (52%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G P + SY+ LI+ YCK R++++A ++ +M ++++ P+ ++Y +++ GL +A
Sbjct: 256 GCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEA 315
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+++ K+M G P+ Y+ + C L +A L+ M E+ L P+ YN+ +
Sbjct: 316 QELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQG 375
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
+ + L + L+ ++ G P+ ++ ++K ++ + A +L+ M + GF
Sbjct: 376 MFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGF 432
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 95/194 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E + P+ V+YN L+ C + +A ++ +KM + P++ +Y+ ++ GL G
Sbjct: 287 MSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGH 346
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A +L M+E PD YN I+ IA +L A L ++ G+ P+ TYN+
Sbjct: 347 LEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNI 406
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ L+ +M G LP++ S +++ + + A+QL ++MV +
Sbjct: 407 MIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRR 466
Query: 181 FGSYILVSDVLFDL 194
F + +L DL
Sbjct: 467 FSADSSTFKMLLDL 480
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 94/232 (40%), Gaps = 13/232 (5%)
Query: 23 DRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAA 82
D ++ A +M + P + +G + Q + +M +G +
Sbjct: 64 DIGIDDAMASFYRMIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYT 123
Query: 83 YNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMM 142
N I + C + A ++ +M + G+ P++ T+ ++ + L+ M
Sbjct: 124 LNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMA 183
Query: 143 GTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLV 202
G +PNT + LV + ++ V A ++ M EKG I + L + C ++
Sbjct: 184 GRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMN 243
Query: 203 EAEKSFLEMIEKGHKPSQVSF----------RRI---KALMELANKQEALQN 241
+A K F M+ KG PS S+ RRI KAL+ +++E + N
Sbjct: 244 DASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPN 295
>gi|356534319|ref|XP_003535704.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Glycine max]
Length = 507
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 128/243 (52%), Gaps = 3/243 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G + D+V+Y +++ +CK ++ ++A + +M+ + P Y ++I GLG +
Sbjct: 250 MEDKGFQLDVVAYGIIMNAHCKAKKFDEAIGLYHEMKARGVRPSPHVYCTLINGLGSDKR 309
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + + K G P+A YNA + YC + R+ DA ++ EM + G+ PN+ T+++
Sbjct: 310 LDEALEFFEVSKASGFVPEAPTYNAVVGAYCWSLRMDDAYRMVGEMKKCGIGPNSRTFDI 369
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGT--GCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
+ + +++ RM G GC P+ + +V++ +E +++A+ +W++M
Sbjct: 370 VLHHLIKGRRIEEASSVFRRMNGGEFGCEPSVSTYEIMVRMFCNEELLDMAVAVWDEMKG 429
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIK-ALMELANKQE 237
KG + + L LC KL EA K F EM++ G +P F +K AL++ +
Sbjct: 430 KGILPGMHMFSTLVCALCHESKLDEACKYFQEMLDVGIRPPAKMFSTLKEALVDAGMEHV 489
Query: 238 ALQ 240
A+
Sbjct: 490 AMH 492
Score = 37.4 bits (85), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 26/122 (21%), Positives = 56/122 (45%)
Query: 98 DASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV 157
+A ++M GL P+ + +N V S + + ++ +M P+ +S L+
Sbjct: 172 EAIKTFEKMEHYGLKPHVSDFNKLVDVLCKSKSVEEAHEVFDKMRKLRLDPDIKSYTILL 231
Query: 158 KLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHK 217
+ +Q+ + ++ +M +KGF ++ ++ + C K EA + EM +G +
Sbjct: 232 EGWSQQQNLIKVNEVCREMEDKGFQLDVVAYGIIMNAHCKAKKFDEAIGLYHEMKARGVR 291
Query: 218 PS 219
PS
Sbjct: 292 PS 293
>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 917
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 128/250 (51%), Gaps = 6/250 (2%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
KP ++SY+ +ID CKDR+ ++A ++ E+M+ + I PDVISYT++I G L G+ +KA+
Sbjct: 455 KPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKC 514
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
+ EM + G PD + I C ++ +A+ L++ ++++G + T +
Sbjct: 515 LFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLC 574
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI- 185
+ + + L+ +M GC+PN +C L+K + ++IAL+L +M+ I
Sbjct: 575 MKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGIN 634
Query: 186 -----LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ ++ D LC G+ EA + F EM G P +S+ + + K + +
Sbjct: 635 CKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAK 694
Query: 241 NLSNKMALFG 250
L N+M G
Sbjct: 695 YLFNEMVDIG 704
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 115/216 (53%), Gaps = 7/216 (3%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
KP ++SY+ +ID CKDR+ ++A ++ ++M+ + + PDVISYTS+I G G+ +KA+
Sbjct: 162 KPTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKC 221
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
+ EM + G PD I +C ++ +A+ L++ MV +G + TY+ +
Sbjct: 222 LFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLC 281
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE-------K 179
+ + + L+ M GC P+ + L+K + K+ IAL L +M+ K
Sbjct: 282 MKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIK 341
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
+ S +L D+LC GK++EA + MI++G
Sbjct: 342 CIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRG 377
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 125/247 (50%), Gaps = 6/247 (2%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
KP+ +SY+ +ID CK + ++A ++ ++M+ + PDVISYTS+I G G+ A+
Sbjct: 636 KPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKY 695
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
+ EM + G PD ++ I C ++ +A+ L++ M+++G PN TY +
Sbjct: 696 LFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLC 755
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE------KG 180
++ + + L+ +M GCLP+ + L+K + ++ AL+L M+
Sbjct: 756 MNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTN 815
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
F ++ ++ D LC G+ EA + F EM G P+ +S+ + + K E +
Sbjct: 816 FKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAK 875
Query: 241 NLSNKMA 247
+L N+M
Sbjct: 876 HLFNEMV 882
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 119/230 (51%), Gaps = 8/230 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ +GV PD++SY LI +C+ + + A + +M D + PDV +++ +I L G+
Sbjct: 665 MKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGK 724
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++L+ M + GC P+ Y ++ C+ R+ +A+ L +M + G P+ TY
Sbjct: 725 VIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGT 784
Query: 121 FFRVFYWSNDLRSSWNLYCRMM------GTGCLPNTQSCMFLVK-LCKRQEKVEIALQLW 173
+ + +++++ L+ +M+ GT P+ S ++ LCK + E A +L+
Sbjct: 785 LMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDE-ARELF 843
Query: 174 NDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+M G ++ L C GKL +A+ F EM+++G + + V++
Sbjct: 844 KEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTY 893
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 78/131 (59%), Gaps = 6/131 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDE------DISPDVISYTSIIGG 54
M+++G PD+V+Y L+ C+ ++ A ++ +KM + + PDVISY+ II G
Sbjct: 770 MQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDG 829
Query: 55 LGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPN 114
L G+ D+AR++ KEMK G P+ +Y + I +C + +L DA L +EMV++G+ N
Sbjct: 830 LCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLN 889
Query: 115 ATTYNLFFRVF 125
A TY++ F
Sbjct: 890 AVTYSVMIHGF 900
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 119/249 (47%), Gaps = 10/249 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G+ PD++SY LI +C + EKA + +M D I PDV + +I G+
Sbjct: 191 MKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGK 250
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++L+ M GC D Y+ I+ C+ R+ +A+ L M + G P+A Y
Sbjct: 251 VIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGT 310
Query: 121 FFRVFYWSNDLRSSWNLYCRMM------GTGCL-PN-TQSCMFLVKLCKRQEKVEIALQL 172
+ + + + +L+ M+ G C+ P+ T S M + LCK + +E A +L
Sbjct: 311 LMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIE-ANEL 369
Query: 173 WNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI-KALME 231
M+++G I+ L LC ++ EA F+ M + G +P +++ + K L +
Sbjct: 370 LEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQ 429
Query: 232 LANKQEALQ 240
N ALQ
Sbjct: 430 TGNINIALQ 438
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 124/291 (42%), Gaps = 41/291 (14%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G+ PD++SY LI +C + EKA + +M D I PDV + + +I L G+
Sbjct: 484 MKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGK 543
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A +L+ + + GC D ++ C+ R+ A+ L +M + G PN T
Sbjct: 544 VIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCAT 603
Query: 121 FFRVFYWSNDLRSSWNLYCRMM------GTGCLPNTQSCMFLVK-LCK------------ 161
+ S +++ + L+ M+ G C PN S ++ LCK
Sbjct: 604 LMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFK 663
Query: 162 ----------------------RQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMG 199
R K + A L+N+MV+ G + VL D+LC G
Sbjct: 664 EMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEG 723
Query: 200 KLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFG 250
K++EA + MI++G P+ V++ + + + ++ L KM G
Sbjct: 724 KVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLG 774
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 103/210 (49%), Gaps = 6/210 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++GV+PD+ +++ LID+ CK+ +V +A +++E M P+ ++YT+++ GL + +
Sbjct: 700 MVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDR 759
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVE------KGLSPN 114
+A + +M++ GC PD Y ++ C ++ A L +M+ P+
Sbjct: 760 ISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPD 819
Query: 115 ATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWN 174
+Y++ + L+ M G +PN S L+ R K+E A L+N
Sbjct: 820 VISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFN 879
Query: 175 DMVEKGFGSYILVSDVLFDLLCDMGKLVEA 204
+MV++G + V+ C G++ +A
Sbjct: 880 EMVDQGVQLNAVTYSVMIHGFCKEGQIDKA 909
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 133/299 (44%), Gaps = 50/299 (16%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++G++PD+ + LID++CK+ +V +A +++E M D+++Y+++I GL + +
Sbjct: 226 MLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHR 285
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYC------IAKRLR----------------- 97
+A + MK+ GC PDA AY ++ C IA L
Sbjct: 286 ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRP 345
Query: 98 -------------------DASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLY 138
+A+ L++ M+++G + TY+ + + + + L+
Sbjct: 346 DVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLF 405
Query: 139 CRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY------ILVS-DVL 191
M GC P+ + L+K + + IALQL +M+ G Y L+S ++
Sbjct: 406 MSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLND-TGRYGIKCKPTLISYSII 464
Query: 192 FDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFG 250
D LC + EA + F EM +G P +S+ + L+ K E + L N+M G
Sbjct: 465 IDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVG 523
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 111/242 (45%), Gaps = 7/242 (2%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
++PD+ + + LID+ CK+ +V +A +++E M D+++Y+++I GL + + +A
Sbjct: 50 IRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEAT 109
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKG------LSPNATTYN 119
+ M++ GC PDA Y ++ C + A L EM+ P +Y+
Sbjct: 110 WLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYS 169
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ + L+ M G +P+ S L+ K E A L+N+M++
Sbjct: 170 IIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDV 229
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEA 238
G + S VL D+ C GK++EA + M+ +G V++ IK L EA
Sbjct: 230 GIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEA 289
Query: 239 LQ 240
Q
Sbjct: 290 TQ 291
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 123/259 (47%), Gaps = 9/259 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G DIV+Y+ LI C + ++ +A + M+ PD I+Y +++ GL G
Sbjct: 373 MIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGN 432
Query: 61 PDKARDVLKEM----KEYG--CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPN 114
+ A + +EM YG C P +Y+ I C +R +A L +EM +G+ P+
Sbjct: 433 INIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPD 492
Query: 115 ATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPN-TQSCMFLVKLCKRQEKVEIALQLW 173
+Y F S + L+ M+ G P+ T S + + LCK+ + +E A +L
Sbjct: 493 VISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIE-ANKLL 551
Query: 174 NDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI-KALMEL 232
++++G ++ L LC ++ +A + FL+M + G P+ V+ + K L +
Sbjct: 552 EVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQS 611
Query: 233 ANKQEALQNLSNKMALFGP 251
N + AL+ N ++ P
Sbjct: 612 GNIKIALELHKNMLSDTSP 630
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 117/260 (45%), Gaps = 10/260 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G DIV+Y+ LI C + ++ +A + M+ PD I+Y +++ GL G
Sbjct: 80 MIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGN 139
Query: 61 PDKARDVLKEM----KEYG--CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPN 114
+ A + +EM YG C P +Y+ I C +R +A L EM +G+ P+
Sbjct: 140 INIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPD 199
Query: 115 ATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWN 174
+Y F S + L+ M+ G P+ + L+ + ++ KV A +L
Sbjct: 200 VISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLE 259
Query: 175 DMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI-KALMELA 233
MV +G I+ L LC ++ EA + F+ M + G +P +++ + K L +
Sbjct: 260 VMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTG 319
Query: 234 NKQEAL---QNLSNKMALFG 250
AL Q + N + +G
Sbjct: 320 KINIALHLHQEMLNDTSQYG 339
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 108/234 (46%), Gaps = 17/234 (7%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISY---------TSI 51
MR G+ PD ++N LI+ C ++V + + + PD+++Y + +
Sbjct: 1 MRLAGLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSML 60
Query: 52 IGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGL 111
I L G+ +A ++L+ M + GC D Y+ I+ C+ R+ +A+ L M + G
Sbjct: 61 IDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGC 120
Query: 112 SPNATTYNLFFRVFYWSNDLRSSWNLYCRMM------GTGCLPNTQSCMFLVK-LCKRQE 164
P+A TY + + ++ + L+ M+ G C P S ++ LCK +
Sbjct: 121 RPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRR 180
Query: 165 KVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
+ E A +L+ +M +G ++ L C GK +A+ F EM++ G +P
Sbjct: 181 EDE-ARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQP 233
>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
Length = 782
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 113/223 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ PD+V+Y+ +I CK + ++KA +++ M + PD ++Y SI+ G GQ
Sbjct: 227 MLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQ 286
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
P +A LK+M+ G P+ Y++ + C R +A + D M ++GL P+ TY
Sbjct: 287 PKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRT 346
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + L L M+ G P+ L+ +QEKV+ A+ +++ M + G
Sbjct: 347 LLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHG 406
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + D+LC G + +A F +MI++G P+ + +
Sbjct: 407 LNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVY 449
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 112/226 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV PD ++YN ++ YC Q ++A ++KMR + + P+V++Y+S++ L G+
Sbjct: 262 MVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGR 321
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR + M + G PD A Y ++ Y L + L+D MV G+ P+ +N+
Sbjct: 322 STEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNI 381
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + ++ +M G PN ++ + + V+ A+ + M+++G
Sbjct: 382 LICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEG 441
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
I+V L LC K +AE+ LEM+++G + + F I
Sbjct: 442 LTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSI 487
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 110/215 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G+ P++V Y +IDV CK V+ A E+M DE ++P++I YTS+I GL +
Sbjct: 402 MRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDK 461
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA +++ EM + G + +N+ I ++C R+ ++ L D MV G+ P+ TYN
Sbjct: 462 WDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNT 521
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + L M+ G P+ + L+ R +++ AL L+ +MV G
Sbjct: 522 LIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSG 581
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
I+ +++ L + A++ ++ + + G
Sbjct: 582 VSPNIITYNIILQGLFHTRRTAAAKELYVSITKSG 616
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 103/227 (45%), Gaps = 5/227 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDE---DISPDVISYTSIIGGLGL 57
M E+G PD+ SYN L+ C + + ++A +++ M D+ PDV+SY +++ G
Sbjct: 154 MTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFK 213
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
G DKA EM + G PD Y++ I C A+ + A +++ MV+ G+ P+ T
Sbjct: 214 EGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMT 273
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDM 176
YN + S + + +M G PN + L+ LCK E A ++++ M
Sbjct: 274 YNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTE-ARKIFDSM 332
Query: 177 VEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++G I L G LVE M+ G +P F
Sbjct: 333 TKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVF 379
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 110/259 (42%), Gaps = 37/259 (14%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVG- 59
MR GV+P++V+Y+ L++ CK+ + +A KI + M + PD+ +Y +++ G G
Sbjct: 297 MRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGA 356
Query: 60 ----------------QPD------------------KARDVLKEMKEYGCYPDAAAYNA 85
QPD +A V +M+++G P+ Y
Sbjct: 357 LVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGT 416
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
I C + + DA ++M+++GL+PN Y + + L M+ G
Sbjct: 417 VIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRG 476
Query: 146 -CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEA 204
CL + CK +E + +L++ MV G I+ + L D C GK+ EA
Sbjct: 477 ICLNTIFFNSIIDSHCKEGRVIE-SEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEA 535
Query: 205 EKSFLEMIEKGHKPSQVSF 223
K M+ G KP V++
Sbjct: 536 TKLLASMVSVGVKPDIVTY 554
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 105/223 (47%), Gaps = 6/223 (2%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
V P + +Y LI C+ +++ + + + + D I++T ++ GL + A
Sbjct: 88 VTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAM 147
Query: 66 D-VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEK---GLSPNATTYNLF 121
D VL+ M E GC PD +YN ++ C R ++A L+ M + G P+ +YN
Sbjct: 148 DIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTV 207
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F+ D +++ Y M+ G LP+ + + LCK Q ++ A+++ N MV+ G
Sbjct: 208 LNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQ-AMDKAMEVLNTMVKNG 266
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + + C G+ EA + +M G +P+ V++
Sbjct: 267 VMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTY 309
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +GVKPDI++YN LID C ++++A K++ M + PD+++Y ++I G V +
Sbjct: 507 MVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSR 566
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A + KEM G P+ YN ++ +R A L + + G +TYN+
Sbjct: 567 MDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNI 626
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+N + ++ + T T++ ++ + +++ A L+ G
Sbjct: 627 ILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANG 686
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
+ ++ + L + G L E + FL M E G
Sbjct: 687 LVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENG 721
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 101/226 (44%), Gaps = 4/226 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +GVKPDIV+Y LI+ YC+ +++ A + ++M +SP++I+Y I+ GL +
Sbjct: 542 MVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRR 601
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A+++ + + G + + YN + C +A + + L T+N+
Sbjct: 602 TAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNI 661
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + +L+ G +P+ ++ + + Q +E L+ M E G
Sbjct: 662 MIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENG 721
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGH---KPSQVSF 223
+ + + + L G + A ++L MI++ H + S SF
Sbjct: 722 CSADSRMLNSIVRKLLQRGDITRA-GTYLFMIDEKHFSLEASTASF 766
>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 1011
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 122/261 (46%), Gaps = 36/261 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV P++ Y LI+ +CK+ V +A+ + + + DV +Y+ +I GL G+
Sbjct: 556 MLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGK 615
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + E++E G P+A YN+ I C + AS L++EM KG++P+ TYN+
Sbjct: 616 MHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNI 675
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPN--TQSCM------------------------ 154
+ ++ + NL+ + G G PN T + M
Sbjct: 676 LIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRG 735
Query: 155 ---------FLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
++ C ++EK E AL L+ +M+EKGF S + + L + C GKL EA
Sbjct: 736 VPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSF-NTLIEGYCKSGKLQEAN 794
Query: 206 KSFLEMIEKGHKPSQVSFRRI 226
EMIEK P+ V++ +
Sbjct: 795 HLLEEMIEKQFIPNHVTYTSL 815
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 110/217 (50%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
+P ++S N L+ K +VE +K+ + M + PDV +YT++I VG A+
Sbjct: 177 RPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKR 236
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
VL EM E GC P+ YN I C A+ L +A L MV+KGL P+ TY++ F
Sbjct: 237 VLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFC 296
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
R + + M+ G P + L+ RQ +E A ++ ++MV G + ++
Sbjct: 297 MEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLI 356
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + L + +C GK+ +A + EM+EKG +P ++
Sbjct: 357 IWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTY 393
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 126/261 (48%), Gaps = 35/261 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGL----- 55
M E GV+PD +Y+ LI+ +C+ + + +A++++++M+ ++P V++Y+ II GL
Sbjct: 381 MMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGN 440
Query: 56 --------------GLV----------------GQPDKARDVLKEMKEYGCYPDAAAYNA 85
GL G+ +++R +L+ M+E G PD YN+
Sbjct: 441 LQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNS 500
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
I +C AKR+ +A + EM+E+ L PNA TY F + + ++ + + M+ G
Sbjct: 501 LIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCG 560
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
LPN L++ ++ V A ++ ++ + + VL L GK+ EA
Sbjct: 561 VLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAF 620
Query: 206 KSFLEMIEKGHKPSQVSFRRI 226
F E+ EKG P+ ++ +
Sbjct: 621 GIFSELQEKGLLPNAFTYNSL 641
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 117/223 (52%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++G+KP+ ++YN LID + + +E+A++I ++M I ++I + +++ G+ G+
Sbjct: 311 MIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGK 370
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA ++++EM E G PD+ Y+ I +C + + A L+DEM ++ L+P TY++
Sbjct: 371 MEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSV 430
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+L+ + + M+ G PN L+ ++ +VE + + M E+G
Sbjct: 431 IINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQG 490
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + L C ++ EA +EM+E+ +P+ ++
Sbjct: 491 ILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTY 533
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 116/256 (45%), Gaps = 35/256 (13%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
V PD+ +Y +I +CK V+ A +++ +M ++ SP++++Y IIGGL D+A
Sbjct: 211 VLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAI 270
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
++ + M + G PD Y+ I +C+ KR R+A ++ EM++ GL P TYN F
Sbjct: 271 ELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGF 330
Query: 126 YWSNDLRSS------------------WNLY----CR-------------MMGTGCLPNT 150
D+ + WN C+ MM G P++
Sbjct: 331 MRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDS 390
Query: 151 QSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLE 210
Q+ L++ R + + A +L ++M ++ +L V+ + LC G L E
Sbjct: 391 QTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILRE 450
Query: 211 MIEKGHKPSQVSFRRI 226
M+ G KP+ V + +
Sbjct: 451 MVMNGLKPNAVVYTTL 466
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 108/223 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MRE G+ PD+ YN LI +CK +++E+A + +M + + P+ +Y + I G G+
Sbjct: 486 MREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGE 545
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A EM G P+ Y A I +C + +A + ++ + + + TY++
Sbjct: 546 MEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSV 605
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + ++ ++ + G LPN + L+ +Q V+ A QL +M KG
Sbjct: 606 LIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKG 665
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I+ ++L D LC G++ A+ F ++ +G P+ V++
Sbjct: 666 INPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTY 708
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 110/246 (44%), Gaps = 1/246 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV PD YN +++ CK+ + EKA + ++M ++ + +S+ ++I G G+ +A
Sbjct: 735 GVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFA-STVSFNTLIEGYCKSGKLQEA 793
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+L+EM E P+ Y + I + C A + +A L EM E+ + P A TY
Sbjct: 794 NHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHG 853
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
++ ++ L+ M+ G P+ + ++ R+ V A +L ++++ KG
Sbjct: 854 YHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMS 913
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSN 244
+ D L LC + E K E+ E G + + I ++A + +
Sbjct: 914 VAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLR 973
Query: 245 KMALFG 250
M FG
Sbjct: 974 SMVKFG 979
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 114/238 (47%), Gaps = 2/238 (0%)
Query: 11 VSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKE 70
VS+N LI+ YCK ++++A ++E+M ++ P+ ++YTS+I G +A+ + E
Sbjct: 775 VSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLE 834
Query: 71 MKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSND 130
M+E P A Y + + Y + + S L +EMV KG+ P+ TY + + +
Sbjct: 835 MQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGN 894
Query: 131 LRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYILVSD 189
+ + L ++ G + + L++ LCK++E E+ L+L N++ E GF +
Sbjct: 895 VMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEV-LKLLNEIGESGFRLGLPTCS 953
Query: 190 VLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMA 247
V+ G + EA + M++ G + S + + E NL +MA
Sbjct: 954 VIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSDNLLKQMA 1011
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 99/234 (42%), Gaps = 36/234 (15%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P+ V ++ L+D Y K + +A + ++ + P ++S S++G L + + V
Sbjct: 143 PNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKV 202
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
M + PD Y I +C ++DA ++ EM EKG SPN TYN+
Sbjct: 203 FDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNV------- 255
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
++G C R ++ A++L MV+KG +
Sbjct: 256 -------------IIGGLC---------------RARLLDEAIELKRSMVDKGLVPDLYT 287
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQ 240
D+L + C + EA+ LEMI+ G KP +++ I M + ++A +
Sbjct: 288 YDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFR 341
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 75/185 (40%), Gaps = 35/185 (18%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P+ V+Y LID CK + +A ++ +M++ ++ P +YTS++ G +G + +
Sbjct: 807 PNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSAL 866
Query: 68 LKEMKEYGCYPD-----------------------------------AAAYNAAIRNYCI 92
+EM G PD AAY+A I+ C
Sbjct: 867 FEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCK 926
Query: 93 AKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS 152
+ + L++E+ E G T ++ R F + ++ + + M+ G + NT S
Sbjct: 927 KEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTS 986
Query: 153 CMFLV 157
LV
Sbjct: 987 LGDLV 991
>gi|255568998|ref|XP_002525469.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535282|gb|EEF36959.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 581
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 109/214 (50%), Gaps = 11/214 (5%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
D+VSY +I Y K + K +K+ +M++ I PD Y S+I L +A +++
Sbjct: 303 DVVSYASIISCYSKAGNLYKVFKLYNQMKEVGIEPDRKIYNSVIFALAKGRHVSEAINLM 362
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
K M+E G P+ YN+ I+ C A+++ +A GL DEM++ G SP TY+ FFR
Sbjct: 363 KTMEEKGIAPNTVTYNSLIKPLCRARKIDEARGLFDEMLQHGHSPTIRTYHAFFRSLRTG 422
Query: 129 NDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG----SY 184
++ + L M GC P + + L++ R + + +LWN + E G G SY
Sbjct: 423 EEV---FALLENMRKLGCHPTIDTYIMLIRKFCRWRQFDDVFKLWNQISENGLGPDRSSY 479
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
I++ LF GKL EA K + +M EK P
Sbjct: 480 IVLIHGLF----LNGKLEEAYKFYADMKEKQLLP 509
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 88/179 (49%), Gaps = 3/179 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E+G++PD YN +I K R V +A +++ M ++ I+P+ ++Y S+I L +
Sbjct: 330 MKEVGIEPDRKIYNSVIFALAKGRHVSEAINLMKTMEEKGIAPNTVTYNSLIKPLCRARK 389
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+AR + EM ++G P Y+A R+ + + L++ M + G P TY +
Sbjct: 390 IDEARGLFDEMLQHGHSPTIRTYHAFFRSLRTGE---EVFALLENMRKLGCHPTIDTYIM 446
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
R F + L+ ++ G P+ S + L+ K+E A + + DM EK
Sbjct: 447 LIRKFCRWRQFDDVFKLWNQISENGLGPDRSSYIVLIHGLFLNGKLEEAYKFYADMKEK 505
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR++G P I +Y LI +C+ RQ + +K+ ++ + + PD SY +I GL L G+
Sbjct: 432 MRKLGCHPTIDTYIMLIRKFCRWRQFDDVFKLWNQISENGLGPDRSSYIVLIHGLFLNGK 491
Query: 61 PDKARDVLKEMKEYGCYPD 79
++A +MKE PD
Sbjct: 492 LEEAYKFYADMKEKQLLPD 510
>gi|356526063|ref|XP_003531639.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like isoform 1 [Glycine max]
gi|356526065|ref|XP_003531640.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like isoform 2 [Glycine max]
Length = 522
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 108/200 (54%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E GV+P++V++N LI+ +CK+R++ +A ++ +M+ ++ P V++Y +++ G G VG
Sbjct: 286 MVENGVQPNVVTFNTLINGFCKERKLHEANRVFNEMKVANVDPSVVTYNTLLNGYGQVGD 345
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ V +EM G D YNA I C + + A+G + E+ ++ L PNA+T++
Sbjct: 346 SEMGVRVYEEMMRNGLKADILTYNALILGLCKDGKTKKAAGFVRELDKENLVPNASTFSA 405
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
N+ ++ +Y M+ +GC PN Q+ L+ + E + A+Q+ DM+ +
Sbjct: 406 LITGQCVRNNSERAFLIYRSMVRSGCSPNGQTFQMLISAFCKNEDFDGAVQVLRDMLGRL 465
Query: 181 FGSYILVSDVLFDLLCDMGK 200
+ L D LC GK
Sbjct: 466 MSPDLSTMSELCDGLCRCGK 485
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 73/147 (49%), Gaps = 6/147 (4%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGL---GLV 58
R V P++ + N +I YC +V+K + ++EKM D +SP+V+S+ ++I G GL
Sbjct: 217 RRSCVSPNVYTLNMIIRAYCMLGEVQKGFDMLEKMMDMGLSPNVVSFNTLISGYCNKGLF 276
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
G K + + M E G P+ +N I +C ++L +A+ + +EM + P+ TY
Sbjct: 277 GLALKVKSL---MVENGVQPNVVTFNTLINGFCKERKLHEANRVFNEMKVANVDPSVVTY 333
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTG 145
N + D +Y MM G
Sbjct: 334 NTLLNGYGQVGDSEMGVRVYEEMMRNG 360
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 99/224 (44%), Gaps = 1/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDED-ISPDVISYTSIIGGLGLVG 59
M+E G P + S N + + R+ + A ++R +SP+V + II ++G
Sbjct: 180 MKEHGFSPTVQSCNAFLSSLLRLRRADIALAFYREIRRRSCVSPNVYTLNMIIRAYCMLG 239
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ K D+L++M + G P+ ++N I YC A + MVE G+ PN T+N
Sbjct: 240 EVQKGFDMLEKMMDMGLSPNVVSFNTLISGYCNKGLFGLALKVKSLMVENGVQPNVVTFN 299
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
F L + ++ M P+ + L+ + E+ ++++ +M+
Sbjct: 300 TLINGFCKERKLHEANRVFNEMKVANVDPSVVTYNTLLNGYGQVGDSEMGVRVYEEMMRN 359
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G + IL + L LC GK +A E+ ++ P+ +F
Sbjct: 360 GLKADILTYNALILGLCKDGKTKKAAGFVRELDKENLVPNASTF 403
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 83/176 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ V P +V+YN L++ Y + E ++ E+M + D+++Y ++I GL G+
Sbjct: 321 MKVANVDPSVVTYNTLLNGYGQVGDSEMGVRVYEEMMRNGLKADILTYNALILGLCKDGK 380
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA ++E+ + P+A+ ++A I C+ A + MV G SPN T+ +
Sbjct: 381 TKKAAGFVRELDKENLVPNASTFSALITGQCVRNNSERAFLIYRSMVRSGCSPNGQTFQM 440
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDM 176
F + D + + M+G P+ + L R K ++AL L ++M
Sbjct: 441 LISAFCKNEDFDGAVQVLRDMLGRLMSPDLSTMSELCDGLCRCGKNQLALALCSEM 496
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 81/186 (43%), Gaps = 1/186 (0%)
Query: 42 SPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASG 101
S + + S+ L + A + MKE+G P + NA + + +R A
Sbjct: 151 SSSPLVFDSLFKTLAHTNKFRHATHIYTLMKEHGFSPTVQSCNAFLSSLLRLRRADIALA 210
Query: 102 LMDEMVEKG-LSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLC 160
E+ + +SPN T N+ R + +++ +++ +MM G PN S L+
Sbjct: 211 FYREIRRRSCVSPNVYTLNMIIRAYCMLGEVQKGFDMLEKMMDMGLSPNVVSFNTLISGY 270
Query: 161 KRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQ 220
+ +AL++ + MVE G ++ + L + C KL EA + F EM PS
Sbjct: 271 CNKGLFGLALKVKSLMVENGVQPNVVTFNTLINGFCKERKLHEANRVFNEMKVANVDPSV 330
Query: 221 VSFRRI 226
V++ +
Sbjct: 331 VTYNTL 336
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/212 (19%), Positives = 89/212 (41%), Gaps = 1/212 (0%)
Query: 13 YNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMK 72
++ L + A I M++ SP V S + + L + + D A +E++
Sbjct: 157 FDSLFKTLAHTNKFRHATHIYTLMKEHGFSPTVQSCNAFLSSLLRLRRADIALAFYREIR 216
Query: 73 EYGCY-PDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDL 131
C P+ N IR YC+ ++ ++++M++ GLSPN ++N +
Sbjct: 217 RRSCVSPNVYTLNMIIRAYCMLGEVQKGFDMLEKMMDMGLSPNVVSFNTLISGYCNKGLF 276
Query: 132 RSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVL 191
+ + M+ G PN + L+ ++ K+ A +++N+M ++ + L
Sbjct: 277 GLALKVKSLMVENGVQPNVVTFNTLINGFCKERKLHEANRVFNEMKVANVDPSVVTYNTL 336
Query: 192 FDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ +G + + EM+ G K +++
Sbjct: 337 LNGYGQVGDSEMGVRVYEEMMRNGLKADILTY 368
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 29/135 (21%), Positives = 59/135 (43%), Gaps = 7/135 (5%)
Query: 112 SPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQ 171
S + ++ F+ +N R + ++Y M G P QSC + R + +IAL
Sbjct: 151 SSSPLVFDSLFKTLAHTNKFRHATHIYTLMKEHGFSPTVQSCNAFLSSLLRLRRADIALA 210
Query: 172 LWNDMVEKG-FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI---- 226
+ ++ + + +++ C +G++ + +M++ G P+ VSF +
Sbjct: 211 FYREIRRRSCVSPNVYTLNMIIRAYCMLGEVQKGFDMLEKMMDMGLSPNVVSFNTLISGY 270
Query: 227 --KALMELANKQEAL 239
K L LA K ++L
Sbjct: 271 CNKGLFGLALKVKSL 285
>gi|356498873|ref|XP_003518272.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 566
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 121/237 (51%), Gaps = 3/237 (1%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD+V+ LID CK+ V +A K+ +MR + PDV++Y +I G G+ D+A
Sbjct: 204 PDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIF 263
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
LK++ YGC D ++N +R+ C R DA L+ M+ KG P+ T+N+
Sbjct: 264 LKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQ 323
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYIL 186
L + N+ M G PN++S L++ C R+ ++ A++ MV +G I+
Sbjct: 324 KGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRK-GIDRAIEHLEIMVSRGCYPDIV 382
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNL 242
++L LC GK+ +A ++ KG PS +S+ I L+++ + A++ L
Sbjct: 383 TYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELL 439
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 108/223 (48%), Gaps = 2/223 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G KPD+V+YN LI +CK+ ++++A ++K+ DVIS+ I+ L G+
Sbjct: 232 MRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGR 291
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +L M GC+P +N I C L A +++ M + G +PN+ ++N
Sbjct: 292 WMDAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNP 351
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ F + + M+ GC P+ + + L LCK KV+ A+ + + + K
Sbjct: 352 LIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCK-DGKVDDAVVILSQLSSK 410
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
G ++ + + D L +GK A + EM KG KP ++
Sbjct: 411 GCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLIT 453
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 115/261 (44%), Gaps = 7/261 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P +V++N LI+ C+ + KA ++E M +P+ S+ +I G
Sbjct: 302 MLRKGCFPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKG 361
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + L+ M GCYPD YN + C ++ DA ++ ++ KG SP+ +YN
Sbjct: 362 IDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNT 421
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L M G P+ +C +V R+ KV A++ ++ + KG
Sbjct: 422 VIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYL--KG 479
Query: 181 FG--SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEA 238
FG + + + LC + A ++M+ G KP++ S+ + + E
Sbjct: 480 FGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPTEASYTTLIKGITYEGLAEE 539
Query: 239 LQNLSNKM---ALFGPSMIPK 256
LSN++ L S+I K
Sbjct: 540 ASKLSNELYSRGLVKKSLIVK 560
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 89/194 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PDIV+YN L+ CKD +V+ A I+ ++ + SP +ISY ++I GL VG+
Sbjct: 372 MVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGK 431
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A ++L+EM G PD + + ++ +A + G+ PNA YN
Sbjct: 432 AELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNS 491
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + M+ GC P S L+K + E A +L N++ +G
Sbjct: 492 IMMGLCKAQQTSLAIDFLVDMVANGCKPTEASYTTLIKGITYEGLAEEASKLSNELYSRG 551
Query: 181 FGSYILVSDVLFDL 194
L+ V D+
Sbjct: 552 LVKKSLIVKVSQDV 565
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 92/183 (50%), Gaps = 3/183 (1%)
Query: 22 KDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAA 81
++ ++E+ + +E M ++ PDV++ T++I +G+ A ++ ++E G DA
Sbjct: 81 RNGELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVIDAN 140
Query: 82 AYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRM 141
+YN I YC + + +A ++D ++PNA TY+ L+ + + R
Sbjct: 141 SYNVLINAYCKSGEIEEALRVLDHT---SVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQ 197
Query: 142 MGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKL 201
+ + C P+ +C L+ ++ V A++L+N+M KG ++ +VL C G+L
Sbjct: 198 LQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRL 257
Query: 202 VEA 204
EA
Sbjct: 258 DEA 260
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 103/223 (46%), Gaps = 3/223 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD+V+ LI +CK + + A +I+ + + D SY +I G+
Sbjct: 95 MTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVIDANSYNVLINAYCKSGE 154
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A L+ + P+AA Y+A + + C +L+ A ++D ++ P+ T +
Sbjct: 155 IEEA---LRVLDHTSVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSKCYPDVVTCTV 211
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + L+ M G GC P+ + L+K ++ +++ A+ + G
Sbjct: 212 LIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYG 271
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
S ++ +++ LC G+ ++A K M+ KG PS V+F
Sbjct: 272 CQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTF 314
>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
Length = 698
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 130/265 (49%), Gaps = 4/265 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ PD+V++ LI V CK +E+A +V +MR+ + + I++T++I G G
Sbjct: 288 MTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGF 347
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A ++EM++ P YNA I YC+ R+ +A L+ EM KG+ P+ TY+
Sbjct: 348 LDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYST 407
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + D S++ L +M+ G LP+ + L+++ ++++ A L+ +M+ G
Sbjct: 408 ILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLG 467
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEAL 239
+ L D C G + A EM++ G P V++ I L + A +EA
Sbjct: 468 LQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQ 527
Query: 240 QNLSNKMALFGPSMIPKREEYLAEM 264
+ L L+ +P +Y A M
Sbjct: 528 RLL---FKLYHEEPVPANIKYDALM 549
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 112/226 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G P+ V+YN L+ +C+ +V++A ++V+ MR+ + P+++++ S++ G+ G+
Sbjct: 183 MRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGR 242
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ AR V EM + G PD +YN + YC +A + EM KG+ P+ T+
Sbjct: 243 MEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTS 302
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
V + +L + L M G N + L+ ++ ++ AL +M +
Sbjct: 303 LIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCR 362
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ + L + C +G++ EA + EM KG KP V++ I
Sbjct: 363 IQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTI 408
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 106/219 (48%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV P++ +YN L+ C ++A ++ MR P+ ++Y +++ G+ D+A
Sbjct: 152 GVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRA 211
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++ M+E G P+ +N+ + C A R+ DA + DEMV++GL+P+ +YN
Sbjct: 212 ERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGG 271
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + +++ M G +P+ + L+ + + +E A+ L +M E+G
Sbjct: 272 YCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMN 331
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ L D C G L +A + EM + +PS V +
Sbjct: 332 EITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCY 370
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 105/220 (47%), Gaps = 3/220 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G P +++YN ++ + D + A + + M + ++P+V +Y ++ L G +A
Sbjct: 118 GYAPSVLAYNAVL-LALSDASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 176
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
VL++M+ GC P+A YN + +C A + A L+D M E GL PN T+N
Sbjct: 177 LSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNG 236
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEKGFGS 183
+ + + ++ M+ G P+ S LV CK E AL ++ +M KG
Sbjct: 237 ICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHE-ALSVFAEMTRKGIMP 295
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ L ++C G L A EM E+G + ++++F
Sbjct: 296 DVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITF 335
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 91/212 (42%), Gaps = 1/212 (0%)
Query: 42 SPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASG 101
+P V++Y +++ L P AR M G P+ YN +R C ++A
Sbjct: 120 APSVLAYNAVLLALSDASLP-SARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALS 178
Query: 102 LMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCK 161
++ +M G PNA TYN F + ++ + L M G PN + +V
Sbjct: 179 VLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGIC 238
Query: 162 RQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQV 221
+ ++E A +++++MV++G + + L C +G EA F EM KG P V
Sbjct: 239 KAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVV 298
Query: 222 SFRRIKALMELANKQEALQNLSNKMALFGPSM 253
+F + +M A E L +M G M
Sbjct: 299 TFTSLIHVMCKAGNLERAVGLVREMRERGLQM 330
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 63/123 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E GV PD ++Y+ LI V C+++++ A+ + + M + PD ++YTS+I G G
Sbjct: 428 MLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGN 487
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A + EM + G PD Y+ I + R ++A L+ ++ + P Y+
Sbjct: 488 VERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDA 547
Query: 121 FFR 123
R
Sbjct: 548 LMR 550
>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 124/261 (47%), Gaps = 35/261 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++GV P++V+YN LI CK +++A++ EKM + ++ +I+Y+ +I GL + +
Sbjct: 272 MEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEK 331
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN- 119
++A VLKE E G P+ YN I YC L DA + +MV KG++PN+ T N
Sbjct: 332 FNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNS 391
Query: 120 -------------------------------LFFRVFYW---SNDLRSSWNLYCRMMGTG 145
F + +W ++ S+ M+
Sbjct: 392 IIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRN 451
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
PN LV ++ K A++LW ++EKGFG+ ++ ++ L LC G + EA
Sbjct: 452 MRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAV 511
Query: 206 KSFLEMIEKGHKPSQVSFRRI 226
+ +M+E+G ++++ +
Sbjct: 512 RLLKKMLERGFVLDKITYNTL 532
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 79/148 (53%), Gaps = 1/148 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G+ P +Y+ LI C ++E A ++++MR E + P+V+ YT++IGG +GQ
Sbjct: 657 MRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQ 716
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DK +VL+EM Y +P+ Y I Y + ++ A+ L+ EMV KG+ P+ TYN+
Sbjct: 717 MDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNV 776
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLP 148
F + + + C M LP
Sbjct: 777 LTNGFCKEGKIEEGFKI-CDYMSQEGLP 803
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 90/171 (52%)
Query: 11 VSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKE 70
V YN LI YC++ +A+K+ + MR + I P +Y+S+I G+ +G+ + A+ ++ E
Sbjct: 632 VVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDE 691
Query: 71 MKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSND 130
M++ G P+ Y A I YC ++ ++ EM + PN TY + + S D
Sbjct: 692 MRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGD 751
Query: 131 LRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
++++ L M+G G +P+T + L ++ K+E ++ + M ++G
Sbjct: 752 MKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGL 802
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 105/223 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G D ++YN LI CK+ +VE+ +K+ +M + I PD +Y +I G+ +G+
Sbjct: 517 MLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGK 576
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A ++ E K P+ Y I YC A ++ + L E++ + L N+ YN
Sbjct: 577 LDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNT 636
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
R + + + ++ L+ M G P T + L+ ++E A L ++M ++G
Sbjct: 637 LIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEG 696
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ L C +G++ + EM P+++++
Sbjct: 697 LLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITY 739
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 104/219 (47%), Gaps = 1/219 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ GV PD+ ++ I+ +CK +VE A ++ M +SP+V++Y ++I GL G
Sbjct: 238 MRQ-GVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGN 296
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A ++M + G Y+ I ++ +A+ ++ E +EKG +PN YN
Sbjct: 297 LDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNT 356
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ +L + + M+ G PN+ + +++ + ++E A + +M+ +G
Sbjct: 357 LIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRG 416
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
F + LC + A + EM+ + +P+
Sbjct: 417 FSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPN 455
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 104/222 (46%), Gaps = 2/222 (0%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E G ++V+ N LI CK +++A ++++KM + D I+Y ++I G G+ +
Sbjct: 484 EKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVE 543
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
+ + EM + G PD YN I C +L +A L +E + L PN TY +
Sbjct: 544 EGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMI 603
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGF 181
+ ++ + L+ ++ N+ L++ C+ VE A +L +DM KG
Sbjct: 604 DGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVE-AFKLHDDMRSKGI 662
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
L +C++G++ +A+ EM ++G P+ V +
Sbjct: 663 PPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCY 704
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 99/237 (41%), Gaps = 35/237 (14%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E G P+ V YN LID YCK + A +I M + I+P+ ++ SII G +GQ +
Sbjct: 344 EKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQME 403
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMV--------------- 107
+A +L+EM G + A+ I C+ R A + EM+
Sbjct: 404 QAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLV 463
Query: 108 --------------------EKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCL 147
EKG N T N + +++ + L +M+ G +
Sbjct: 464 GGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFV 523
Query: 148 PNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEA 204
+ + L+ C ++ KVE +L +MV++G ++L +C +GKL EA
Sbjct: 524 LDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEA 580
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 61/119 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G+ P++V Y LI YCK Q++K ++++M DI P+ I+YT +I G G
Sbjct: 692 MRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGD 751
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
A +L EM G PD YN +C ++ + + D M ++GL + TY
Sbjct: 752 MKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGLPLDEITYT 810
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 101/220 (45%), Gaps = 4/220 (1%)
Query: 10 IVSYNCLIDVYC---KDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
+ + + LI VYC ++ A + + ++ + P V + T ++ L + +K+
Sbjct: 174 VAAVDLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYW 233
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
V + M++ G PD ++ AI +C ++ DA L +M + G+SPN TYN
Sbjct: 234 VFETMRQ-GVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLC 292
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+L ++ +M+ G + L+ + EK A + + +EKGF +
Sbjct: 293 KHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEV 352
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
V + L D C MG L +A + +M+ KG P+ V+ I
Sbjct: 353 VYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSI 392
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 124/288 (43%), Gaps = 20/288 (6%)
Query: 1 MREM---GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGL 57
+REM ++P+ L+ CK+ + A ++ ++ ++ ++++ ++I GL
Sbjct: 444 LREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCK 503
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
G +A +LK+M E G D YN I C ++ + L EMV++G+ P+ T
Sbjct: 504 TGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFT 563
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
YNL L + NL+ +PN + ++ + +K+E +L+ +++
Sbjct: 564 YNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELL 623
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI----------- 226
+ +V + L C G VEA K +M KG P+ ++ +
Sbjct: 624 TQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRME 683
Query: 227 --KALMELANKQEALQNLSNKMALFGP----SMIPKREEYLAEMSASD 268
K L++ K+ L N+ AL G + K L EMS+ D
Sbjct: 684 DAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYD 731
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 113/276 (40%), Gaps = 36/276 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKM--RDEDISPDVIS----------- 47
M G+ P+ V+ N +I +CK Q+E+A I+E+M R I+P +
Sbjct: 377 MVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSR 436
Query: 48 ----------------------YTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNA 85
T+++GGL G+ A ++ + E G + NA
Sbjct: 437 FESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNA 496
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
I C +++A L+ +M+E+G + TYN + + L M+ G
Sbjct: 497 LIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQG 556
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
P+T + L+ R K++ A+ LWN+ + + V+ D C K+ E E
Sbjct: 557 IEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGE 616
Query: 206 KSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQ 240
K F E++ + + + V + I+A N EA +
Sbjct: 617 KLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFK 652
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 34/50 (68%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGG 54
G+ PD V+YN L + +CK+ ++E+ +KI + M E + D I+YT+++ G
Sbjct: 766 GIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGLPLDEITYTTLVHG 815
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 41/90 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + P+ ++Y +ID Y K ++ A K++ +M + I PD ++Y + G G+
Sbjct: 727 MSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGK 786
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNY 90
++ + M + G D Y + +
Sbjct: 787 IEEGFKICDYMSQEGLPLDEITYTTLVHGW 816
>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
Length = 579
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 119/241 (49%), Gaps = 1/241 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G D +YN ++D +CK +V KAY+I+E+M+++ + P V +Y +I+ GL + +
Sbjct: 323 MKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDR 382
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + +E K G + Y++ I + R+ +A +++EM++KGL+PN T+N
Sbjct: 383 LDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNS 442
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ + + M C PNT + L+ R +K A W DM ++G
Sbjct: 443 LLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQG 502
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQ-EAL 239
++ + L +G + +A F G P SF + M AN+ EA
Sbjct: 503 LVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAY 562
Query: 240 Q 240
Q
Sbjct: 563 Q 563
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 112/226 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + P++++ N ++D CK R++E+AYKI E +PD ++Y S+I GLG GQ
Sbjct: 148 MEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQ 207
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + ++M + G + Y + IRN+ I R D + E++ +G P+ T N
Sbjct: 208 VDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNT 267
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + ++ ++ + G LP+ +S L+ + + +++ M ++G
Sbjct: 268 YMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQG 327
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
F + + D C GK+ +A + EM EK +P+ ++ I
Sbjct: 328 FALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAI 373
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 118/228 (51%), Gaps = 5/228 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
++ G+KPD VSY +I V CK ++ +A ++ +M E P +Y ++I G G G+
Sbjct: 9 LKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGR 68
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLR-DASGLMDEMVEKGLSPNATTYN 119
+ A +L+ ++E GC P ++N+ + C+ K+ + D + + E+++K PN++TYN
Sbjct: 69 FEDAYKLLERLRERGCIPSVVSFNSILT--CLGKKRKVDEALSLFEVMKKDAEPNSSTYN 126
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVE 178
+ + + ++ + M PN + +V +LCK + K+E A +++ +
Sbjct: 127 IIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKAR-KLEEAYKIFESASQ 185
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+G + L D L G++ EA + F +M++ GH + V + +
Sbjct: 186 RGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSL 233
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 104/211 (49%), Gaps = 1/211 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P +YN +I Y + E AYK++E++R+ P V+S+ SI+ LG + D+A +
Sbjct: 51 PCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSL 110
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
+ MK+ P+++ YN I C+ R+ +A ++DEM L PN T N+
Sbjct: 111 FEVMKK-DAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCK 169
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ L ++ ++ GC P+ + L+ ++ +V+ A +L+ M++ G + +V
Sbjct: 170 ARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVV 229
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
L G+ + K F E+I +G KP
Sbjct: 230 YTSLIRNFFIHGRKEDGHKIFKELIRRGCKP 260
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 94/195 (48%), Gaps = 1/195 (0%)
Query: 29 AYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIR 88
A+K +++ + + PD +SYTS+I L G+ +A ++ +M+ P A AYN I
Sbjct: 2 AWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIM 61
Query: 89 NYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLP 148
Y A R DA L++ + E+G P+ ++N + + +L+ +M P
Sbjct: 62 GYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEP 120
Query: 149 NTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSF 208
N+ + ++ + +VE A ++ ++M +L +++ D LC KL EA K F
Sbjct: 121 NSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIF 180
Query: 209 LEMIEKGHKPSQVSF 223
++G P V++
Sbjct: 181 ESASQRGCNPDCVTY 195
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 117/273 (42%), Gaps = 36/273 (13%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVG--- 59
+ G PD V+Y LID K QV++AY++ EKM D + + + YTS+I + G
Sbjct: 185 QRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKE 244
Query: 60 --------------QPD------------------KARDVLKEMKEYGCYPDAAAYNAAI 87
+PD K R + ++++ YG PD +Y+ I
Sbjct: 245 DGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILI 304
Query: 88 RNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCL 147
A + R+ S + M ++G + +A YN F S + ++ + M
Sbjct: 305 HGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQ 364
Query: 148 PNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKS 207
P + +V + ++++ A L+ + KG +++ L D +G++ EA
Sbjct: 365 PTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLI 424
Query: 208 FLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
EM++KG P+ ++ + AL++ EAL
Sbjct: 425 LEEMMKKGLTPNVYTWNSLLDALVKAEEINEAL 457
>gi|449436631|ref|XP_004136096.1| PREDICTED: uncharacterized protein LOC101205322 [Cucumis sativus]
Length = 1559
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 110/218 (50%), Gaps = 3/218 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV+ D+ SY+ +D+ CK + KA K+ ++M+ + + DV++Y ++I +G+
Sbjct: 764 MDKKGVRKDLHSYSIYMDIQCKSGKPWKAVKLYKEMKKKGMKLDVVAYNTVIHAVGISEG 823
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A V EMKE GC P+ N I+ +C R +DA ++D+M+++ PN TY+
Sbjct: 824 VDFASRVFHEMKEMGCKPNVVTCNTVIKLFCENGRFKDAHMMLDQMLKRDCQPNVITYHC 883
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
FFR ++ L+ RM+ G P + + L++ R + +WN M E G
Sbjct: 884 FFRSLEKPKEILV---LFDRMIKYGVHPKMDTYVMLLRKFGRWGFLRPVFLVWNKMEELG 940
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
+ L D L + G + A K EM+ KG P
Sbjct: 941 CSPNECAYNALIDALVEKGMIDMARKYDEEMVAKGLSP 978
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 2/160 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKI-VEKMRDEDISPDVISYTSIIGGLGLVG 59
+RE ++ D S+ LID C+ R V++A ++ K R D + I+ G +G
Sbjct: 694 LREFKLR-DETSFCNLIDALCESRHVDEAQELCFGKNRKLDCDSSTKIHNLILRGWLKMG 752
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
K RD +EM + G D +Y+ + C + + A L EM +KG+ + YN
Sbjct: 753 WWSKCRDFWEEMDKKGVRKDLHSYSIYMDIQCKSGKPWKAVKLYKEMKKKGMKLDVVAYN 812
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKL 159
S + + ++ M GC PN +C ++KL
Sbjct: 813 TVIHAVGISEGVDFASRVFHEMKEMGCKPNVVTCNTVIKL 852
>gi|297736961|emb|CBI26162.3| unnamed protein product [Vitis vinifera]
Length = 636
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 105/221 (47%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E GV P ++N LI +CKD+ + ++ M + +PD+ +Y ++ GL G+
Sbjct: 290 EDGVVPRNAAFNKLISGFCKDKAYGRVSDLLHSMIARNRAPDIFTYQEVVNGLCKGGKGP 349
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
+ V K++K+ G PD Y I C K L DA L EM++KG PN TYN
Sbjct: 350 EGFRVFKDLKDRGYAPDRVMYTTMIHGLCRMKWLGDARKLWFEMIQKGFLPNEYTYNAMI 409
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
++ +L +W +Y M G T S ++K K++ A L+ +M KG
Sbjct: 410 HGYFKIGNLEEAWKMYREMCDKGYGEKTVSYNVMIKGLCSHGKIKEAHDLFEEMSHKGIL 469
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + L C GK+VE E++++G +PS S+
Sbjct: 470 RNHITYNALVRGFCKEGKIVEGANLLYELLDQGIQPSAASY 510
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 112/241 (46%), Gaps = 3/241 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+++ G PD V Y +I C+ + + A K+ +M + P+ +Y ++I G +G
Sbjct: 358 LKDRGYAPDRVMYTTMIHGLCRMKWLGDARKLWFEMIQKGFLPNEYTYNAMIHGYFKIGN 417
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A + +EM + G +YN I+ C ++++A L +EM KG+ N TYN
Sbjct: 418 LEEAWKMYREMCDKGYGEKTVSYNVMIKGLCSHGKIKEAHDLFEEMSHKGILRNHITYNA 477
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEK 179
R F + NL ++ G P+ S L+ KLC+ + ++ A LW+DM +
Sbjct: 478 LVRGFCKEGKIVEGANLLYELLDQGIQPSAASYAPLIDKLCQEGD-MQNAKILWDDMQNR 536
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEA 238
G + D + C G +E + M+ +P + SF I+ L ++ +A
Sbjct: 537 GMEPAVCTHDFMITGFCKQGCAMEGMEWLTTMLRSKLRPQKKSFESLIQCLSQIDRLDDA 596
Query: 239 L 239
L
Sbjct: 597 L 597
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 51/109 (46%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
+ G++P SY LID C++ ++ A + + M++ + P V ++ +I G G
Sbjct: 500 DQGIQPSAASYAPLIDKLCQEGDMQNAKILWDDMQNRGMEPAVCTHDFMITGFCKQGCAM 559
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGL 111
+ + L M P ++ + I+ RL DA ++D M++ G
Sbjct: 560 EGMEWLTTMLRSKLRPQKKSFESLIQCLSQIDRLDDALLVLDSMLKIGF 608
>gi|302767030|ref|XP_002966935.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
gi|300164926|gb|EFJ31534.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
Length = 428
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 115/241 (47%), Gaps = 4/241 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G +V+Y LID CK ++ A +++KM D +P+V++YT++I GL +
Sbjct: 36 MAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARR 95
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDE-MVEKGLSPNATTYN 119
P A +K M GC PD YN+ I C+A R+ DA ++ E M+E G P+ TYN
Sbjct: 96 PHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYN 155
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVE 178
F + L + M G P+ + C + LCK +++ A Q++ M+E
Sbjct: 156 TFISGLCKAGKLDKGLEMLEEMDRGGISPDVVTFCSIISGLCK-ANRIDDAFQVFKGMLE 214
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQE 237
+G L ++ D L +L E+ M++ GH ++ I AL+ + +
Sbjct: 215 RGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKSGHYALSATYAPLIHALIRAGDIES 274
Query: 238 A 238
A
Sbjct: 275 A 275
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 119/248 (47%), Gaps = 3/248 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G PD+V+YN I CK +++K +++E+M ISPDV+++ SII GL +
Sbjct: 142 MIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVTFCSIISGLCKANR 201
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A V K M E GC PD+ Y+ + N A RL +++ MV+ G + TY
Sbjct: 202 IDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKSGHYALSATYAP 261
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSC-MFLVKLCKRQEKVEIALQLWNDMVEK 179
+ D+ S+ Y + M GC+ + F+ LC R K +A + M+E
Sbjct: 262 LIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALC-RSGKFPLAKNILLGMIES 320
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG-HKPSQVSFRRIKALMELANKQEA 238
G +L + + D LC G + +A K +M++ G KP + F + + A +
Sbjct: 321 GSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQ 380
Query: 239 LQNLSNKM 246
Q L +M
Sbjct: 381 AQQLLKEM 388
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 118/248 (47%), Gaps = 3/248 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDIS-PDVISYTSIIGGLGLVG 59
M G +PD+V+YN LI C +++ A +++++ E PDV++Y + I GL G
Sbjct: 106 MLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAG 165
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ DK ++L+EM G PD + + I C A R+ DA + M+E+G P++ TY+
Sbjct: 166 KLDKGLEMLEEMDRGGISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYS 225
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ +N L + + M+ +G + + L+ R +E A + +E
Sbjct: 226 IMLDNLSRANRLDTVEEVLEHMVKSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEA 285
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEA 238
G + + LC GK A+ L MIE G P+ +S+ I L + N +A
Sbjct: 286 GCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDA 345
Query: 239 LQNLSNKM 246
+ LS KM
Sbjct: 346 WK-LSRKM 352
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 114/244 (46%), Gaps = 3/244 (1%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
D YN LI CK R+ A +++ M V++YT++I GL G D A+ +L
Sbjct: 9 DAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALL 68
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
++M + GC P+ Y A I C A+R DA + M+ G P+ TYN +
Sbjct: 69 QKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMA 128
Query: 129 NDL-RSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
N + + L M+ +G +P+ + F+ LCK K++ L++ +M G ++
Sbjct: 129 NRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCK-AGKLDKGLEMLEEMDRGGISPDVV 187
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKM 246
+ LC ++ +A + F M+E+G P +++ + + AN+ + ++ + M
Sbjct: 188 TFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHM 247
Query: 247 ALFG 250
G
Sbjct: 248 VKSG 251
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 59/112 (52%), Gaps = 2/112 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDI-SPDVISYTSIIGGLGLVG 59
M E G P+++SYN +ID CK V+ A+K+ KM D PDVI + ++I G G
Sbjct: 317 MIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAG 376
Query: 60 QPDKARDVLKEMKEYG-CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKG 110
+ +A+ +LKEMK C PD YN I L+ A L++EM G
Sbjct: 377 RLSQAQQLLKEMKAKNICVPDVVTYNTMIDGQSKFGSLKQAKLLLEEMQAVG 428
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 58/119 (48%), Gaps = 2/119 (1%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E G ++ ++N I C+ + A I+ M + P+++SY +I GL G D
Sbjct: 284 EAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVD 343
Query: 63 KARDVLKEMKEYGC-YPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLS-PNATTYN 119
A + ++M + GC PD +N I +C A RL A L+ EM K + P+ TYN
Sbjct: 344 DAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAQQLLKEMKAKNICVPDVVTYN 402
>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Vitis vinifera]
Length = 1022
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 124/261 (47%), Gaps = 35/261 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++GV P++V+YN LI CK +++A++ EKM + ++ +I+Y+ +I GL + +
Sbjct: 339 MEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEK 398
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN- 119
++A VLKE E G P+ YN I YC L DA + +MV KG++PN+ T N
Sbjct: 399 FNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNS 458
Query: 120 -------------------------------LFFRVFYW---SNDLRSSWNLYCRMMGTG 145
F + +W ++ S+ M+
Sbjct: 459 IIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRN 518
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
PN LV ++ K A++LW ++EKGFG+ ++ ++ L LC G + EA
Sbjct: 519 MRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAV 578
Query: 206 KSFLEMIEKGHKPSQVSFRRI 226
+ +M+E+G ++++ +
Sbjct: 579 RLLKKMLERGFVLDKITYNTL 599
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 72/125 (57%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G+ P +Y+ LI C ++E A ++++MR E + P+V+ YT++IGG +GQ
Sbjct: 724 MRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQ 783
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DK +VL+EM Y +P+ Y I Y + ++ A+ L+ EMV KG+ P+ TYN+
Sbjct: 784 MDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNV 843
Query: 121 FFRVF 125
F
Sbjct: 844 LTNGF 848
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 91/177 (51%), Gaps = 2/177 (1%)
Query: 11 VSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKE 70
V YN LI YC++ +A+K+ + MR + I P +Y+S+I G+ +G+ + A+ ++ E
Sbjct: 699 VVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDE 758
Query: 71 MKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSND 130
M++ G P+ Y A I YC ++ ++ EM + PN TY + + S D
Sbjct: 759 MRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGD 818
Query: 131 LRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
++++ L M+G G +P+T + L ++ K+E L D V GF S + +
Sbjct: 819 MKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGKLLAEDGV--GFNSPLFL 873
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 105/223 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G D ++YN LI CK+ +VE+ +K+ +M + I PD +Y +I G+ +G+
Sbjct: 584 MLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGK 643
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A ++ E K P+ Y I YC A ++ + L E++ + L N+ YN
Sbjct: 644 LDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNT 703
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
R + + + ++ L+ M G P T + L+ ++E A L ++M ++G
Sbjct: 704 LIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEG 763
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ L C +G++ + EM P+++++
Sbjct: 764 LLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITY 806
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 106/222 (47%), Gaps = 7/222 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ GV PD+ ++ I+ +CK +VE A ++ M +SP+V++Y ++I GL G
Sbjct: 305 MRQ-GVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGN 363
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A ++M + G Y+ I ++ +A+ ++ E +EKG +PN YN
Sbjct: 364 LDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNT 423
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCK--RQEKVEIALQLWNDMV 177
+ +L + + M+ G PN+ + +++ CK + E+ E L+ +M+
Sbjct: 424 LIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILE---EML 480
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
+GF + LC + A + EM+ + +P+
Sbjct: 481 SRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPN 522
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 104/222 (46%), Gaps = 2/222 (0%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E G ++V+ N LI CK +++A ++++KM + D I+Y ++I G G+ +
Sbjct: 551 EKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVE 610
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
+ + EM + G PD YN I C +L +A L +E + L PN TY +
Sbjct: 611 EGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMI 670
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGF 181
+ ++ + L+ ++ N+ L++ C+ VE A +L +DM KG
Sbjct: 671 DGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVE-AFKLHDDMRSKGI 729
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
L +C++G++ +A+ EM ++G P+ V +
Sbjct: 730 PPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCY 771
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 99/237 (41%), Gaps = 35/237 (14%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E G P+ V YN LID YCK + A +I M + I+P+ ++ SII G +GQ +
Sbjct: 411 EKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQME 470
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMV--------------- 107
+A +L+EM G + A+ I C+ R A + EM+
Sbjct: 471 QAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLV 530
Query: 108 --------------------EKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCL 147
EKG N T N + +++ + L +M+ G +
Sbjct: 531 GGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFV 590
Query: 148 PNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEA 204
+ + L+ C ++ KVE +L +MV++G ++L +C +GKL EA
Sbjct: 591 LDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEA 647
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 101/220 (45%), Gaps = 4/220 (1%)
Query: 10 IVSYNCLIDVYC---KDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
+ + + LI VYC ++ A + + ++ + P V + T ++ L + +K+
Sbjct: 241 VAAVDLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYW 300
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
V + M++ G PD ++ AI +C ++ DA L +M + G+SPN TYN
Sbjct: 301 VFETMRQ-GVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLC 359
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+L ++ +M+ G + L+ + EK A + + +EKGF +
Sbjct: 360 KHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEV 419
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
V + L D C MG L +A + +M+ KG P+ V+ I
Sbjct: 420 VYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSI 459
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 124/288 (43%), Gaps = 20/288 (6%)
Query: 1 MREM---GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGL 57
+REM ++P+ L+ CK+ + A ++ ++ ++ ++++ ++I GL
Sbjct: 511 LREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCK 570
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
G +A +LK+M E G D YN I C ++ + L EMV++G+ P+ T
Sbjct: 571 TGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFT 630
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
YNL L + NL+ +PN + ++ + +K+E +L+ +++
Sbjct: 631 YNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELL 690
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI----------- 226
+ +V + L C G VEA K +M KG P+ ++ +
Sbjct: 691 TQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRME 750
Query: 227 --KALMELANKQEALQNLSNKMALFGP----SMIPKREEYLAEMSASD 268
K L++ K+ L N+ AL G + K L EMS+ D
Sbjct: 751 DAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYD 798
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 105/240 (43%), Gaps = 3/240 (1%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
R + P ++ +I C + + E A + + +M ++ P+ T+++GGL G+
Sbjct: 482 RGFSINPG--AFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKH 539
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
A ++ + E G + NA I C +++A L+ +M+E+G + TYN
Sbjct: 540 SDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTL 599
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
+ + L M+ G P+T + L+ R K++ A+ LWN+ +
Sbjct: 600 ISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDL 659
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQ 240
+ V+ D C K+ E EK F E++ + + + V + I+A N EA +
Sbjct: 660 VPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFK 719
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 55/107 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G+ P++V Y LI YCK Q++K ++++M DI P+ I+YT +I G G
Sbjct: 759 MRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGD 818
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMV 107
A +L EM G PD YN +C ++ + L ++ V
Sbjct: 819 MKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGKLLAEDGV 865
>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
Length = 973
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 122/261 (46%), Gaps = 36/261 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV P++ Y LI+ +CK+ V +A+ + + + DV +Y+ +I GL G+
Sbjct: 547 MLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGK 606
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + E++E G P+A YN+ I C + AS L++EM KG++P+ TYN+
Sbjct: 607 MHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNI 666
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPN--TQSCM------------------------ 154
+ ++ + NL+ + G G PN T + M
Sbjct: 667 LIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRG 726
Query: 155 ---------FLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
++ C ++EK E AL L+ +M+EKGF S + + L + C GKL EA
Sbjct: 727 VPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSF-NTLIEGYCKSGKLQEAN 785
Query: 206 KSFLEMIEKGHKPSQVSFRRI 226
EMIEK P+ V++ +
Sbjct: 786 HLLEEMIEKQFIPNHVTYTSL 806
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 126/261 (48%), Gaps = 35/261 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGL----- 55
M E GV+PD +Y+ LI+ +C+ + + +A++++++M+ ++P V++Y+ II GL
Sbjct: 372 MMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGN 431
Query: 56 --------------GLV----------------GQPDKARDVLKEMKEYGCYPDAAAYNA 85
GL G+ +++R +L+ M+E G PD YN+
Sbjct: 432 LQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNS 491
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
I +C AKR+ +A + EM+E+ L PNA TY F + + ++ + + M+ G
Sbjct: 492 LIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCG 551
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
LPN L++ ++ V A ++ ++ + + VL L GK+ EA
Sbjct: 552 VLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAF 611
Query: 206 KSFLEMIEKGHKPSQVSFRRI 226
F E+ EKG P+ ++ +
Sbjct: 612 GIFSELQEKGLLPNAFTYNSL 632
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 117/223 (52%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++G+KP+ ++YN LID + + +E+A++I ++M I ++I + +++ G+ G+
Sbjct: 302 MIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGK 361
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA ++++EM E G PD+ Y+ I +C + + A L+DEM ++ L+P TY++
Sbjct: 362 MEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSV 421
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+L+ + + M+ G PN L+ ++ +VE + + M E+G
Sbjct: 422 IINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQG 481
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + L C ++ EA +EM+E+ +P+ ++
Sbjct: 482 ILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTY 524
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 108/223 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MRE G+ PD+ YN LI +CK +++E+A + +M + + P+ +Y + I G G+
Sbjct: 477 MREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGE 536
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A EM G P+ Y A I +C + +A + ++ + + + TY++
Sbjct: 537 MEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSV 596
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + ++ ++ + G LPN + L+ +Q V+ A QL +M KG
Sbjct: 597 LIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKG 656
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I+ ++L D LC G++ A+ F ++ +G P+ V++
Sbjct: 657 INPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTY 699
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 105/220 (47%), Gaps = 2/220 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ P+ V+Y ++D YCK + A++++E+M + PD Y I+ + +KA
Sbjct: 691 GLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKA 750
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
D+ +EM E G + ++N I YC + +L++A+ L++EM+EK PN TY
Sbjct: 751 LDLFQEMLEKG-FASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDH 809
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + + L+ M +P ++ L+ + L+ +MV KG
Sbjct: 810 NCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPD 869
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
+ V+ D C G ++EA K E++ KG P + FR
Sbjct: 870 KMTYYVMIDAYCREGNVMEACKLKDEILVKG-MPMKSGFR 908
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 111/272 (40%), Gaps = 52/272 (19%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
+P ++S N L+ K +VE +K+ + M + PDV +YT++I VG A+
Sbjct: 186 RPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKR 245
Query: 67 VLKEMKE-----------------YGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEK 109
VL EM E G PD Y+ I +C+ KR R+A ++ EM++
Sbjct: 246 VLLEMGEKARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDV 305
Query: 110 GLSPNATTYNLFFRVFYWSNDLRSS------------------WNLY----CR------- 140
GL P TYN F D+ + WN C+
Sbjct: 306 GLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKA 365
Query: 141 ------MMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDL 194
MM G P++Q+ L++ R + + A +L ++M ++ +L V+ +
Sbjct: 366 LEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIING 425
Query: 195 LCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
LC G L EM+ G KP+ V + +
Sbjct: 426 LCRCGNLQGTNAILREMVMNGLKPNAVVYTTL 457
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 74/156 (47%), Gaps = 6/156 (3%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P+ V+Y LID CK + +A ++ +M++ ++ P +YTS++ G +G + +
Sbjct: 798 PNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSAL 857
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNA------TTYNLF 121
+EM G PD Y I YC + +A L DE++ KG+ + T ++
Sbjct: 858 FEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMKSGFRLGLPTCSVI 917
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV 157
R F + ++ + + M+ G + NT S LV
Sbjct: 918 ARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLV 953
>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
Length = 716
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 119/242 (49%), Gaps = 1/242 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G D +YN ++D +CK +V KAY+I+E+M+++ + P V +Y +I+ GL + +
Sbjct: 455 MKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDR 514
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + +E K G + Y++ I + R+ +A +++EM++KGL+PN T+N
Sbjct: 515 LDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNS 574
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ + + M C PNT + L+ R +K A W DM ++G
Sbjct: 575 LLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQG 634
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQ-EAL 239
++ + L +G + +A F G P SF + M AN+ EA
Sbjct: 635 LVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAY 694
Query: 240 QN 241
Q
Sbjct: 695 QT 696
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 112/226 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + P++++ N ++D CK R++E+AYKI E +PD ++Y S+I GLG GQ
Sbjct: 280 MEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQ 339
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + ++M + G + Y + IRN+ I R D + E++ +G P+ T N
Sbjct: 340 VDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNT 399
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + ++ ++ + G LP+ +S L+ + + +++ M ++G
Sbjct: 400 YMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQG 459
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
F + + D C GK+ +A + EM EK +P+ ++ I
Sbjct: 460 FALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAI 505
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 117/225 (52%), Gaps = 5/225 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
++ G+KPD VSY +I V CK ++ +A ++ +M E P +Y ++I G G G+
Sbjct: 141 LKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGR 200
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLR-DASGLMDEMVEKGLSPNATTYN 119
+ A +L+ ++E GC P ++N+ + C+ K+ + D + + E+++K PN++TYN
Sbjct: 201 FEDAYKLLERLRERGCIPSVVSFNSILT--CLGKKRKVDEALSLFEVMKKDAEPNSSTYN 258
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVE 178
+ + + ++ + M PN + +V +LCK + K+E A +++ +
Sbjct: 259 IIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKAR-KLEEAYKIFESASQ 317
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+G + L D L G++ EA + F +M++ GH + V +
Sbjct: 318 RGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVY 362
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 104/211 (49%), Gaps = 1/211 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P +YN +I Y + E AYK++E++R+ P V+S+ SI+ LG + D+A +
Sbjct: 183 PCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSL 242
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
+ MK+ P+++ YN I C+ R+ +A ++DEM L PN T N+
Sbjct: 243 FEVMKK-DAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCK 301
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ L ++ ++ GC P+ + L+ ++ +V+ A +L+ M++ G + +V
Sbjct: 302 ARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVV 361
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
L G+ + K F E+I +G KP
Sbjct: 362 YTSLIRNFFIHGRKEDGHKVFKELIRRGCKP 392
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 99/214 (46%), Gaps = 7/214 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E+G + + + L+ ++ QV A +V++++ + PD++ Y I G G
Sbjct: 71 MQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGN 130
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A E+K G PD +Y + I C A RL +A L +M + P A YN
Sbjct: 131 VDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNT 190
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDM---V 177
+ + ++ L R+ GC+P+ S ++ ++ KV+ AL L+ M
Sbjct: 191 MIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA 250
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEM 211
E +Y +++ D+LC G++ EA + EM
Sbjct: 251 EPNSSTY----NIIIDMLCLGGRVEEAYRILDEM 280
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 117/273 (42%), Gaps = 36/273 (13%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVG--- 59
+ G PD V+Y LID K QV++AY++ EKM D + + + YTS+I + G
Sbjct: 317 QRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKE 376
Query: 60 --------------QPD------------------KARDVLKEMKEYGCYPDAAAYNAAI 87
+PD K R + ++++ YG PD +Y+ I
Sbjct: 377 DGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILI 436
Query: 88 RNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCL 147
A + R+ S + M ++G + +A YN F S + ++ + M
Sbjct: 437 HGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQ 496
Query: 148 PNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKS 207
P + +V + ++++ A L+ + KG +++ L D +G++ EA
Sbjct: 497 PTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLI 556
Query: 208 FLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
EM++KG P+ ++ + AL++ EAL
Sbjct: 557 LEEMMKKGLTPNVYTWNSLLDALVKAEEINEAL 589
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 97/222 (43%), Gaps = 2/222 (0%)
Query: 22 KDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAA 81
+ R+++ A V MR P +YT +IG L +P++A ++L++M+E G
Sbjct: 22 RARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVH 81
Query: 82 AYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRM 141
+ +R ++ DA L+DE+ L P+ YN+ F + ++ + + +
Sbjct: 82 LFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHEL 141
Query: 142 MGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKL 201
G P+ S ++ + + ++ A +L+ M + + + G+
Sbjct: 142 KAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRF 201
Query: 202 VEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLS 243
+A K + E+G PS VSF I L L K++ + LS
Sbjct: 202 EDAYKLLERLRERGCIPSVVSFNSI--LTCLGKKRKVDEALS 241
>gi|326504240|dbj|BAJ90952.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 263
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 104/206 (50%), Gaps = 2/206 (0%)
Query: 23 DRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAA 82
DR V A ++++M D I PDV SY+ I+ + + + + MK+ G P A
Sbjct: 17 DRTVNAAENLLKEMNDRGIEPDVTSYSIILHVYSRAHKAELCLCMFRSMKDRGICPTVAT 76
Query: 83 YNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMM 142
Y + I+ RL DA L+ EMV +G+ P+ TYN FF+ + D+ + LY +M
Sbjct: 77 YTSVIKCLASCGRLEDAESLLGEMVSEGVCPSPATYNCFFKEYRGRKDVSGALELYNKMK 136
Query: 143 G--TGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGK 200
+ P+ S L+ + + ++ E ++LWNDM E+ G + +L C K
Sbjct: 137 APCSPTAPDIHSYNILLGMFIKLDRHETVMELWNDMCERAVGPDLDSYTLLVHGFCAKEK 196
Query: 201 LVEAEKSFLEMIEKGHKPSQVSFRRI 226
EA + F+EMIEKG P +++F +
Sbjct: 197 WREACQFFMEMIEKGFLPQKITFETL 222
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 61/131 (46%), Gaps = 2/131 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRD--EDISPDVISYTSIIGGLGLVGQPD 62
GV P +YNC Y + V A ++ KM+ +PD+ SY ++G + + +
Sbjct: 104 GVCPSPATYNCFFKEYRGRKDVSGALELYNKMKAPCSPTAPDIHSYNILLGMFIKLDRHE 163
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
++ +M E PD +Y + +C ++ R+A EM+EKG P T+ +
Sbjct: 164 TVMELWNDMCERAVGPDLDSYTLLVHGFCAKEKWREACQFFMEMIEKGFLPQKITFETLY 223
Query: 123 RVFYWSNDLRS 133
R ++ LR+
Sbjct: 224 RGLIQADMLRT 234
>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
Length = 731
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 129/265 (48%), Gaps = 4/265 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ PD+V++ LI V CK +E+A +V +MR+ + + +++T++I G G
Sbjct: 321 MTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGF 380
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A ++ MK+ P YNA I YC+ R+ +A L+ EM KGL P+ TY+
Sbjct: 381 LDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYST 440
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + D S++ L +M+ G LP+ + L+++ ++++ A L+ +M++ G
Sbjct: 441 IISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLG 500
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEAL 239
L D C G + A +M++ G P V++ I L + A EA
Sbjct: 501 LQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQ 560
Query: 240 QNLSNKMALFGPSMIPKREEYLAEM 264
Q L L+ IP +Y A M
Sbjct: 561 QLL---FKLYHEDPIPANTKYDALM 582
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 111/226 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G P++V+YN L+ + + +V+ A ++V MR+ + P+++++ S++ G+ G+
Sbjct: 216 MRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGK 275
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ AR V EM G PD +YN + YC A +A + EM +KG+ P+ T+
Sbjct: 276 MEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTS 335
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
V + +L + L +M G N + L+ ++ ++ AL M +
Sbjct: 336 LIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCR 395
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ + L + C +G++ EA + EM KG KP V++ I
Sbjct: 396 IKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTI 441
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 105/222 (47%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV P++ +YN L+ C ++A I+ MR P+V++Y +++ G+ D A
Sbjct: 185 GVAPNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGA 244
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++ M+E G P+ +N+ + C A ++ DA + DEMV +GL+P+ +YN
Sbjct: 245 ERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGG 304
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + + +++ M G +P+ + L+ + + +E A+ L M E+G
Sbjct: 305 YCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMN 364
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ L D C G L +A + M + KPS V + +
Sbjct: 365 EVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNAL 406
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 121/267 (45%), Gaps = 19/267 (7%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+KPD+V+Y+ +I YCK+ A+++ ++M ++ + PD I+Y+S+I L +
Sbjct: 426 MEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKR 485
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A + K M + G PD Y + I +C + A L D+MV+ G+ P+ TY++
Sbjct: 486 LSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSV 545
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQE-KVEIAL--------- 170
S + L ++ +P L+ C++ E K +AL
Sbjct: 546 LINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGL 605
Query: 171 -----QLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS-FR 224
+++ M+++ + V VL C G +++A +M++ G P+ S
Sbjct: 606 MNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTIS 665
Query: 225 RIKALME---LANKQEALQNLSNKMAL 248
I+ L E + + +Q L N +L
Sbjct: 666 LIRGLFENGMVVEADQVIQQLLNYCSL 692
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 103/220 (46%), Gaps = 3/220 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G P +++YN ++ + D + A + + M + ++P+V +Y ++ L G +A
Sbjct: 151 GYVPSVLAYNAVL-LALSDASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 209
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+L++M+ GC P+ YN + + A + A L+ M E GL PN T+N
Sbjct: 210 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNG 269
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEKGFGS 183
+ + + ++ M+ G P+ S LV CK E AL ++ +M +KG
Sbjct: 270 MCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHE-ALSVFAEMTQKGIMP 328
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ L ++C G L A +M E+G + ++V+F
Sbjct: 329 DVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTF 368
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 86/204 (42%), Gaps = 1/204 (0%)
Query: 43 PDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGL 102
P V++Y +++ L AR M G P+ YN +R C ++A +
Sbjct: 154 PSVLAYNAVLLALS-DASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSI 212
Query: 103 MDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKR 162
+ +M G PN TYN F+ + ++ + L M G PN + +V +
Sbjct: 213 LRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCK 272
Query: 163 QEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
K+E A +++++MV +G + + L C G EA F EM +KG P V+
Sbjct: 273 AGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVT 332
Query: 223 FRRIKALMELANKQEALQNLSNKM 246
F + +M A E L +M
Sbjct: 333 FTSLIHVMCKAGNLERAVTLVRQM 356
>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Brachypodium distachyon]
Length = 651
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 111/219 (50%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV PD+ S+N LI +C+ ++E+A + ++MR ++PDV+S++ +IG G+ D A
Sbjct: 259 GVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHA 318
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ L+EM+E+G PD Y I +C A + +A + DEMV G P+ TYN
Sbjct: 319 AEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNG 378
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
L + L M G P+ + L+ R +E ALQ ++ + ++
Sbjct: 379 LCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPD 438
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I+ + L D +C G L +A + + +M + P+ V++
Sbjct: 439 IVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTY 477
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 112/226 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR V PD+VS++CLI ++ + +++ A + + +MR+ + PD + YT +IGG G
Sbjct: 290 MRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGL 349
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A V EM +GC PD YN + C +RL DA L++EM E+G+ P+ T+
Sbjct: 350 MLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTT 409
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ + + + P+ + L+ RQ + A +LW+DM +
Sbjct: 410 LIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSRE 469
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ +L D C+ G++ A EM+ KG P+ +++ I
Sbjct: 470 IFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSI 515
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 117/241 (48%), Gaps = 1/241 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E GV PD+ ++ LI YC+D +EKA + + + D+ + PD+++Y ++I G+ G
Sbjct: 395 MKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGD 454
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA ++ +M +P+ Y+ I ++C ++ +A +DEMV KG+ PN TYN
Sbjct: 455 LGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNS 514
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + S ++ +M +P+ + L+ ++ K+ A L M +
Sbjct: 515 IIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENEN 574
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF-RRIKALMELANKQEAL 239
+ +++ G + EA+ + +M +G +P + ++ I + N +++
Sbjct: 575 VQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSF 634
Query: 240 Q 240
Q
Sbjct: 635 Q 635
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 117/237 (49%), Gaps = 3/237 (1%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
V PD+V++N ++D + VE A +++ M + I P +++Y S++ GL G+ DKAR
Sbjct: 190 VFPDVVTHNVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAR 249
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+V + M G PD ++N I +C A L +A EM + ++P+ +++ +F
Sbjct: 250 EVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLF 309
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPN-TQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
++ + M G +P+ M + C+ +E AL++ ++MV G
Sbjct: 310 TRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLE-ALRVRDEMVAFGCLPD 368
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQ 240
++ + L + LC +L +AE+ EM E+G P +F I N ++ALQ
Sbjct: 369 VVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQ 425
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 92/182 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + P+ V+Y+ LID +C+ QV+ A+ +++M ++ I P++++Y SII G G
Sbjct: 465 MHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGN 524
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
K + L +M+ PD YN I Y ++ +A L+ M + + P+A TYN+
Sbjct: 525 VSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNM 584
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F +++ + +Y +M G P+ + M ++ + + QL ++M++KG
Sbjct: 585 IISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKG 644
Query: 181 FG 182
Sbjct: 645 LA 646
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 99/223 (44%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MRE G+ PD V Y +I +C+ + +A ++ ++M PDV++Y +++ GL +
Sbjct: 325 MREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERR 384
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A ++L EMKE G PD + I YC + A D + ++ L P+ TYN
Sbjct: 385 LSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNT 444
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
DL + L+ M PN + L+ + +V+ A ++MV KG
Sbjct: 445 LIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKG 504
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I+ + + C G + + ++ +M P +++
Sbjct: 505 IVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITY 547
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 78/149 (52%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ P+I++YN +I YC+ V K + + KMR + + PD+I+Y ++I G G+
Sbjct: 500 MVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGK 559
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++LK M+ PDA YN I + + +++A + +M +G+ P+ TY
Sbjct: 560 MHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMS 619
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPN 149
+ + + S+ L+ M+ G P+
Sbjct: 620 MINGHVVAGNSKKSFQLHDEMLQKGLAPD 648
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/247 (20%), Positives = 100/247 (40%), Gaps = 8/247 (3%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP----DK 63
P ++ LI Y + R+ +A++ + D + + +++ L G P D
Sbjct: 87 PQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPIPAAASNALLAALSRAGWPHLTADA 146
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
R VL E Y N + +YC + + ++ EM ++ + P+ T+N+
Sbjct: 147 YRLVLSSNSEVNTY----TLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVD 202
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
+ + D+ ++ L M+ G P + ++K R + + A +++ M G
Sbjct: 203 ARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAP 262
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLS 243
+ ++L C G+L EA + + EM + P VSF + L + +
Sbjct: 263 DVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYL 322
Query: 244 NKMALFG 250
+M FG
Sbjct: 323 REMREFG 329
>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 108/223 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G PD ++ LI +C+D + KA + M +I PD+++Y ++I G VG+
Sbjct: 354 MVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGE 413
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA ++ M +P+ Y I YC + +A L D M+EKG+ P T N
Sbjct: 414 MEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNT 473
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + S D + RM+ G P+ S L+ R++ ++ A N M ++G
Sbjct: 474 VIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEG 533
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I+ +V+ + C G++ EAE +MIEKG P + ++
Sbjct: 534 LLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTY 576
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 126/252 (50%), Gaps = 8/252 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ D+V+YN LI YC++ +E+A++I+ M D+ + P + +Y +II GL G+
Sbjct: 144 MEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGR 203
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A+ +L EM G PD YN + C +A + EM+ +G+ P+ +++
Sbjct: 204 YARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSS 263
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLP-NTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
VF + L + + M G +P N + + C+ +E AL++ ++M+E+
Sbjct: 264 LIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLE-ALKIRDEMLEQ 322
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
G ++ + + + LC L +A+K F EM+E+G P +F L +
Sbjct: 323 GCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTF------TTLIHGHCQD 376
Query: 240 QNLSNKMALFGP 251
N++ ++LFG
Sbjct: 377 GNMTKALSLFGT 388
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 110/223 (49%), Gaps = 2/223 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV PD+VS++ LI V+ ++R +++A M+ + PD + YT ++ G G
Sbjct: 249 MLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGN 308
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + EM E GC D AYN + C K L DA L DEMVE+G P+ T+
Sbjct: 309 MLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTT 368
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
++ + +L+ M P+ + L+ CK E +E A +LW+ M+ +
Sbjct: 369 LIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGE-MEKASELWDGMISR 427
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
+ +L + C +G + EA + + MIEKG KP+ V+
Sbjct: 428 KIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVT 470
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 103/211 (48%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G++ ++ + N +++ CKD + + + +M I D+++Y ++IG G ++A
Sbjct: 113 GIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEA 172
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+++ M + G P YNA I C R A G++ EM+ GLSP+ TTYN
Sbjct: 173 FEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVE 232
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
++ + ++ M+ G +P+ S L+ + R ++ AL + DM + G
Sbjct: 233 SCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPD 292
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
++ VL C G ++EA K EM+E+G
Sbjct: 293 NVIYTVLMHGYCRNGNMLEALKIRDEMLEQG 323
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 80/149 (53%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+KP +V+ N +I YC+ KA + + +M + ++PD ISY ++I G
Sbjct: 459 MIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDN 518
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA + +M++ G PD YN + +C R+++A ++ +M+EKG++P+ +TY
Sbjct: 519 MDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTA 578
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPN 149
++L ++ + M+ G P+
Sbjct: 579 LINGHVTQDNLNEAFRFHDEMLQRGFAPD 607
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 86/175 (49%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P+ ++Y LI+ YC V +A+++ + M ++ I P +++ ++I G G KA +
Sbjct: 431 PNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEF 490
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L M G PD +YN I + + A +++M ++GL P+ TYN+ F
Sbjct: 491 LGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCR 550
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
++ + + +M+ G P+ + L+ Q+ + A + ++M+++GF
Sbjct: 551 QGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFA 605
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 96/224 (42%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+R G I + N L+ K VE A+++ ++ I +V + ++ L G+
Sbjct: 74 LRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREVVRSGIELNVYTLNIMVNALCKDGK 133
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D + L EM+ G Y D YN I YC L +A +M+ M +KGL P+ TYN
Sbjct: 134 FDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNA 193
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ + M+ G P+T + LV+ C+R E A +++ +M+ +
Sbjct: 194 IINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSE-AKEIFGEMLRQ 252
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G ++ L + L +A F +M + G P V +
Sbjct: 253 GVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIY 296
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/214 (18%), Positives = 81/214 (37%), Gaps = 35/214 (16%)
Query: 13 YNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMK 72
++ LI Y + R++ + + +R + + + S++GGL + + A +V +E+
Sbjct: 51 FDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREVV 110
Query: 73 EYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLR 132
G + N + C + D + EM G+ + TYN
Sbjct: 111 RSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYN------------- 157
Query: 133 SSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLF 192
++G C R+ +E A ++ N M +KG + + +
Sbjct: 158 -------TLIGAYC---------------REGLLEEAFEIMNSMADKGLKPSLFTYNAII 195
Query: 193 DLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ LC G+ A+ +EM+ G P ++ +
Sbjct: 196 NGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTL 229
>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 882
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 119/241 (49%), Gaps = 1/241 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G D +YN ++D +CK +V KAY+I+E+M+++ + P V +Y +I+ GL + +
Sbjct: 589 MKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDR 648
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + +E K G + Y++ I + R+ +A +++EM++KGL+PN T+N
Sbjct: 649 LDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNS 708
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ + + M C PNT + L+ R +K A W DM ++G
Sbjct: 709 LLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQG 768
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQ-EAL 239
++ + L +G + +A F G P SF + M AN+ EA
Sbjct: 769 LVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAY 828
Query: 240 Q 240
Q
Sbjct: 829 Q 829
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 112/226 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + P++++ N ++D CK R++E+AYKI E +PD ++Y S+I GLG GQ
Sbjct: 414 MEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQ 473
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + ++M + G + Y + IRN+ I R D + E++ +G P+ T N
Sbjct: 474 VDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNT 533
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + ++ ++ + G LP+ +S L+ + + +++ M ++G
Sbjct: 534 YMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQG 593
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
F + + D C GK+ +A + EM EK +P+ ++ I
Sbjct: 594 FALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAI 639
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 117/225 (52%), Gaps = 5/225 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
++ G+KPD VSY +I V CK ++ +A ++ +M E P +Y ++I G G G+
Sbjct: 275 LKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGR 334
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLR-DASGLMDEMVEKGLSPNATTYN 119
+ A +L+ ++E GC P ++N+ + C+ K+ + D + + E+++K PN++TYN
Sbjct: 335 FEDAYKLLERLRERGCIPSVVSFNSILT--CLGKKRKVDEALSLFEVMKKDAEPNSSTYN 392
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVE 178
+ + + ++ + M PN + +V +LCK + K+E A +++ +
Sbjct: 393 IIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKAR-KLEEAYKIFESASQ 451
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+G + L D L G++ EA + F +M++ GH + V +
Sbjct: 452 RGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVY 496
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 104/211 (49%), Gaps = 1/211 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P +YN +I Y + E AYK++E++R+ P V+S+ SI+ LG + D+A +
Sbjct: 317 PCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSL 376
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
+ MK+ P+++ YN I C+ R+ +A ++DEM L PN T N+
Sbjct: 377 FEVMKK-DAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCK 435
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ L ++ ++ GC P+ + L+ ++ +V+ A +L+ M++ G + +V
Sbjct: 436 ARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVV 495
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
L G+ + K F E+I +G KP
Sbjct: 496 YTSLIRNFFIHGRKEDGHKIFKELIRRGCKP 526
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 99/214 (46%), Gaps = 7/214 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E+G + + + L+ ++ QV A +V++++ + PD++ Y I G G
Sbjct: 205 MQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGN 264
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A E+K G PD +Y + I C A RL +A L +M + P A YN
Sbjct: 265 VDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNT 324
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDM---V 177
+ + ++ L R+ GC+P+ S ++ ++ KV+ AL L+ M
Sbjct: 325 MIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA 384
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEM 211
E +Y +++ D+LC G++ EA + EM
Sbjct: 385 EPNSSTY----NIIIDMLCLGGRVEEAYRILDEM 414
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 117/273 (42%), Gaps = 36/273 (13%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVG--- 59
+ G PD V+Y LID K QV++AY++ EKM D + + + YTS+I + G
Sbjct: 451 QRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKE 510
Query: 60 --------------QPD------------------KARDVLKEMKEYGCYPDAAAYNAAI 87
+PD K R + ++++ YG PD +Y+ I
Sbjct: 511 DGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILI 570
Query: 88 RNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCL 147
A + R+ S + M ++G + +A YN F S + ++ + M
Sbjct: 571 HGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQ 630
Query: 148 PNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKS 207
P + +V + ++++ A L+ + KG +++ L D +G++ EA
Sbjct: 631 PTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLI 690
Query: 208 FLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
EM++KG P+ ++ + AL++ EAL
Sbjct: 691 LEEMMKKGLTPNVYTWNSLLDALVKAEEINEAL 723
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 88/176 (50%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G++ ++V Y+ LID + K ++++AY I+E+M + ++P+V ++ S++ L + ++A
Sbjct: 663 GIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEA 722
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ MKE C P+ Y+ I C ++ A +M ++GL PN TY
Sbjct: 723 LVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISG 782
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++ +++L+ R G +P+ S L++ + A Q++ + +G
Sbjct: 783 LAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQVFEETRLRG 838
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 78/169 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ P++ ++N L+D K ++ +A + M++ P+ +Y+ +I GL V +
Sbjct: 694 MMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQK 753
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA ++M++ G P+ Y I + DA L + G P+A ++N
Sbjct: 754 YNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNA 813
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIA 169
+N ++ ++ GC N +SC+ L+ + E +E A
Sbjct: 814 LIEGMSNANRAMEAYQVFEETRLRGCRINIKSCISLLDALNKSECLEQA 862
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 98/222 (44%), Gaps = 2/222 (0%)
Query: 22 KDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAA 81
+ R+++ A V MR P +YT +IG L +P++A ++L++M+E G
Sbjct: 156 RARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVH 215
Query: 82 AYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRM 141
+ +R ++ DA L+DE+ L P+ YN+ F + ++ +W + +
Sbjct: 216 LFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHEL 275
Query: 142 MGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKL 201
G P+ S ++ + + ++ A +L+ M + + + G+
Sbjct: 276 KAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRF 335
Query: 202 VEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLS 243
+A K + E+G PS VSF I L L K++ + LS
Sbjct: 336 EDAYKLLERLRERGCIPSVVSFNSI--LTCLGKKRKVDEALS 375
>gi|357491947|ref|XP_003616261.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355517596|gb|AES99219.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 112/222 (50%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G++P +VS+N LI YC+ + VE+ + + M E ISPDV +Y+++I GL + ++A
Sbjct: 256 GLRPSVVSFNTLISGYCRSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEA 315
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ EM E G P+ + I C ++ A + M ++G+ P+ TYN
Sbjct: 316 NGLFDEMCEMGLVPNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALING 375
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
DL+ + L M+G G P+ + L+ C + ++ AL++ + MVE+G
Sbjct: 376 LCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELD 435
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ L LC G++ +AE+ +M+ GHKP ++ +
Sbjct: 436 DVAFTALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMV 477
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 111/237 (46%), Gaps = 5/237 (2%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ PD+ +Y+ LI+ CK+ +VE+A + ++M + + P+ +++T++I G G+ D A
Sbjct: 292 ISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQCKHGKIDLAL 351
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+ MK+ G PD YNA I C L++A L++EM+ G P+ T+
Sbjct: 352 RNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDGC 411
Query: 126 YWSNDLRSSWNLYCRMMGTGC-LPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
D+ S+ + RM+ G L + + LC R +V A ++ DM+ G
Sbjct: 412 CKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLC-RDGRVRDAERMLKDMLSAGHKPD 470
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQN 241
++ D C G + K EM G P V++ ALM KQ ++N
Sbjct: 471 DPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTY---NALMNGFCKQGQMKN 524
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 99/203 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G++PD+++YN LI+ C+D +++A K++ +M PD I++T+++ G G
Sbjct: 357 MKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGD 416
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A ++ M E G D A+ A I C R+RDA ++ +M+ G P+ TY +
Sbjct: 417 MDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTM 476
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F D++ L M G +P + L+ +Q +++ A L + M+
Sbjct: 477 VIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQMKNAKMLLHAMLNME 536
Query: 181 FGSYILVSDVLFDLLCDMGKLVE 203
+ ++L D C G V+
Sbjct: 537 VVPNDITFNILLDGHCKHGSSVD 559
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 102/223 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M EMG+ P+ V++ LID CK +++ A + E M+D I PD+I+Y ++I GL G
Sbjct: 322 MCEMGLVPNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGD 381
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR +L EM G PD + + C + A + D MVE+G+ + +
Sbjct: 382 LKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTA 441
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+R + + M+ G P+ + ++ ++ V++ +L +M G
Sbjct: 442 LISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDG 501
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + L + C G++ A+ M+ P+ ++F
Sbjct: 502 RVPGVVTYNALMNGFCKQGQMKNAKMLLHAMLNMEVVPNDITF 544
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 96/224 (42%), Gaps = 35/224 (15%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
+ G P++ +N L+ +CK V A + +++ + P V+S+ ++I G +
Sbjct: 219 DYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVE 278
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
+ + M+ PD Y+A I C R+ +A+GL DEM E GL PN T+
Sbjct: 279 EGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFT--- 335
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
++ C + K+++AL+ + M ++G
Sbjct: 336 -----------------TLIDGQC---------------KHGKIDLALRNFEIMKDRGIR 363
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ + L + LC G L EA K EMI G KP +++F +
Sbjct: 364 PDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTL 407
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 107/239 (44%), Gaps = 3/239 (1%)
Query: 10 IVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGG-LGLVGQPDKARDVL 68
++ ++ LI Y +E A + + ++ + S V ++ + L QP +
Sbjct: 155 VLVFDALIIAYTDSEFIEDAIQCLRLVKKNNFSIPVCGCDYLLRRVMKLNQQPGHCWEFY 214
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
E+ +YG P+ +N + +C + +A + DE+ +GL P+ ++N + S
Sbjct: 215 LEVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRS 274
Query: 129 NDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVS 188
++ + L M P+ + L+ ++ +VE A L+++M E G +
Sbjct: 275 KNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTF 334
Query: 189 DVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLSNKM 246
L D C GK+ A ++F M ++G +P +++ I L + +EA + L N+M
Sbjct: 335 TTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEA-RKLLNEM 392
>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
Length = 814
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 112/228 (49%), Gaps = 3/228 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+ ++G PD V+Y L CK +V++A K++E+ + DV++YT++ GL GQ
Sbjct: 569 LEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQ 628
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + +EM G PDAAAY I K+L DA DEM+ KG P TY
Sbjct: 629 VDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTA 688
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSC--MFLVKLCKRQEKVEIALQLWNDMVE 178
+ + ++ +++ + M+ G L + + CK KV+ AL+L+ DM+
Sbjct: 689 LVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKAL-KVDAALKLFEDMIS 747
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+G + S LFD L GK +A++ EM G P +F I
Sbjct: 748 RGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAI 795
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 113/227 (49%), Gaps = 1/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDED-ISPDVISYTSIIGGLGLVG 59
M+ KPD+ ++ L+D CK EKA+++ +M + PD +T+++ L
Sbjct: 180 MKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAK 239
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ +AR+V +M++ G PDA AYN I A ++A ++D M+ K P TY
Sbjct: 240 RVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYG 299
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ + L + L+ M +G PN+ L+ + +++ A L+++MVE
Sbjct: 300 ILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEA 359
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G+ ++ V+ D LC G +A KSF EM+ G KP+ V++ I
Sbjct: 360 GYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTI 406
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 115/250 (46%), Gaps = 5/250 (2%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQ--VEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
G KPD +YN LI+ C+ R+ VE+A+ ++ + PD ++YT + GL +G+ D
Sbjct: 536 GCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVD 595
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
+A +L+E G D AY A C ++ A L EMV +G +P+A Y
Sbjct: 596 RAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCII 655
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG-- 180
L + + M+G G P + LV+ V+ A + M+ +G
Sbjct: 656 NGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGEL 715
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
GS +++ D L C K+ A K F +MI +G+ P+ V+ + + + K E Q
Sbjct: 716 VGS-VMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQ 774
Query: 241 NLSNKMALFG 250
L +MA G
Sbjct: 775 ELLQEMAAGG 784
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 118/261 (45%), Gaps = 38/261 (14%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G +PD++++ +ID CK E+A K E+M P+V++YT+II GL +G+
Sbjct: 356 MVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGR 415
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A ++K M +GC+PD+ Y + +C RL +A+ L+DE+ + SPN Y+
Sbjct: 416 VANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSS 475
Query: 121 FFR--------------VFYWS----------------------NDLRSSWNLYCRMMGT 144
+F S L + ++ RM+
Sbjct: 476 LVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSE 535
Query: 145 GCLPNTQSCMFLVK-LCK-RQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLV 202
GC P+ + L+ LC+ R+ +VE A L +D+ + G+ + L LC +G++
Sbjct: 536 GCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVD 595
Query: 203 EAEKSFLEMIEKGHKPSQVSF 223
A K E +G V++
Sbjct: 596 RAVKMLEEASSRGWNADVVAY 616
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 113/243 (46%), Gaps = 1/243 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G PD ++YN +ID K ++A K+++ M + P ++Y ++ L G
Sbjct: 251 MEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGT 310
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A ++ + M G P++ Y + I + + R+++A L DEMVE G P+ T+ +
Sbjct: 311 LERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTV 370
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
S + + + MM GC PN + +++ + +V A ++ M+ G
Sbjct: 371 MIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHG 430
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS-QVSFRRIKALMELANKQEAL 239
+ L D C +G+L EA + E+ + P+ Q+ + L + + ++ L
Sbjct: 431 CFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTL 490
Query: 240 QNL 242
+L
Sbjct: 491 DDL 493
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 4/100 (4%)
Query: 10 IVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLK 69
++ Y+ LI +CK +V+ A K+ E M P ++ S+ GL G+ +KA+++L+
Sbjct: 719 VMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQ 778
Query: 70 EMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEK 109
EM G P AA + A + R D SG + ++V++
Sbjct: 779 EMAAGGSPPHAATFTAILDGL----RKSDESGKLLKLVQE 814
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 100/243 (41%), Gaps = 19/243 (7%)
Query: 24 RQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLV-GQ--PDKARDVLKEMK-------- 72
R+ + IVE ++D + S +I LG V GQ VL+ +K
Sbjct: 46 RRADLVTSIVETIKDVRLDGSSWSVHNIRNVLGPVHGQVLGSHVAAVLRSLKVTGTAISF 105
Query: 73 ------EYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
+ G D YN + K + +EM++ G++PN ++N+ R F
Sbjct: 106 FRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFA 165
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF-GSYI 185
+ + + M C P+ + + LV + E A +++++M+ GF
Sbjct: 166 RTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDR 225
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLSN 244
+ + L ++ EA + F +M + G P +++ I L + + QEAL+ L N
Sbjct: 226 ALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDN 285
Query: 245 KMA 247
+A
Sbjct: 286 MLA 288
>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
Length = 855
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 127/267 (47%), Gaps = 3/267 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MRE G +P + + L+ Y + E+AY+++ +M +PDVI YTS+I L G+
Sbjct: 529 MRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGR 588
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR V M E GC PDA Y I+N+ + A +++ M + G+ P+ YN
Sbjct: 589 VPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNS 648
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + ++ +Y RM+ +G PN + L+ + K + A L+ +M+EK
Sbjct: 649 LMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKD 708
Query: 181 FGSYILVS-DVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
LVS +L D L G++ EA F EMI++G P ++ + + A +
Sbjct: 709 EVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEA 768
Query: 240 QNLSNKMALFGPSMIPKREEYLAEMSA 266
+ L M G + P + Y A ++
Sbjct: 769 KKLVEDMVKLGVN--PDVQAYSALITG 793
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 119/260 (45%), Gaps = 34/260 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ PD+V+ N +++ CK R+++KA ++ +M P ++SY ++I GL + +
Sbjct: 11 MHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLASIDK 70
Query: 61 PDKARDVLKEMKEYGCYPDAAA----------------------------------YNAA 86
D+A M + GC PD A Y +
Sbjct: 71 MDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRFRPDVFLYTSV 130
Query: 87 IRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGC 146
I YC A L +++EM+ G P+A Y + + ++ L+ RM +GC
Sbjct: 131 IHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGC 190
Query: 147 LPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEK 206
L + + M L++ K++ A +L+ +M+E+G+ Y+ V D L LC GK+ EA +
Sbjct: 191 LGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANE 250
Query: 207 SFLEMIEKGHKPSQVSFRRI 226
+ ++ K S+V++ +
Sbjct: 251 IYQTVVAKKVATSRVAYNSL 270
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 101/226 (44%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
++ G P++V+Y +ID K ++E K E M P +YT +I GL
Sbjct: 389 LKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQM 448
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A V ++M + GC PD Y I + A ++ +A L+D M+ KG P A TY
Sbjct: 449 LPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGS 508
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + + + + +M GC P L+ + + E A Q+ +M +G
Sbjct: 509 IVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARG 568
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+++ L DLL G++ EA F MIEKG P +++ I
Sbjct: 569 CAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTI 614
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 112/241 (46%), Gaps = 6/241 (2%)
Query: 11 VSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKE 70
V+YN L+D YCK +V+ K++ +M + D PD+ +Y ++ G + D A ++ K
Sbjct: 265 VAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALELFKL 324
Query: 71 MKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSND 130
+ YGC P+AA Y I+ A+R+ +A DE + + +Y + S
Sbjct: 325 LSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEAL------DVISYTTVIKGLADSKR 378
Query: 131 LRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDV 190
+ + L+ ++ GC PN + ++ + ++E L+ + DM V
Sbjct: 379 IDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTV 438
Query: 191 LFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFG 250
+ D LC L +A K F +M++KG P +++ + A+K + + L + M G
Sbjct: 439 VIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKG 498
Query: 251 P 251
P
Sbjct: 499 P 499
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 110/223 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G PD ++Y LID + K ++++A K+++ M + P ++Y SI+ G +
Sbjct: 459 MVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDM 518
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A++V+ +M+E GC P + + + Y R +A ++ EM +G +P+ Y
Sbjct: 519 INEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTS 578
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + + + +++ M+ GC P+ + +++ + VE A ++ M + G
Sbjct: 579 LIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSG 638
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G + L D + ++ +A + M+ G KP+ V+F
Sbjct: 639 VGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTF 681
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 124/288 (43%), Gaps = 40/288 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD++ Y LID+ +V +A + + M ++ +PD ++Y +II +G
Sbjct: 564 MTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGN 623
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A ++L+ M + G PD AYN+ + Y +R+ A G+ D MV G+ PNA T+N+
Sbjct: 624 VEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNV 683
Query: 121 FFRVFYWSNDLRSSWNLYCRMM------------------------------------GT 144
+ +++L+ M+
Sbjct: 684 LMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDR 743
Query: 145 GCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEA 204
G +P + L+ + ++ A +L DMV+ G + L L D + A
Sbjct: 744 GIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTA 803
Query: 205 EKSFLEMIEKGHKPSQVSFRRIKALMELANKQ---EAL-QNLSNKMAL 248
F EM+++G P++V+++ ++ A + EA+ Q+ S +A+
Sbjct: 804 WDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRALDLEAVKQHFSQGVAM 851
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 90/207 (43%), Gaps = 1/207 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P +Y +ID CK + + A K+ E+M + PD I+YT++I G + D+AR +
Sbjct: 431 PTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKL 490
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L M G P A Y + + +C + +A ++ +M E+G P + +
Sbjct: 491 LDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLS 550
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
++ + M GC P+ L+ L +V A +++ M+EKG L
Sbjct: 551 KGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALT 610
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEK 214
+ +G VEA LE++ K
Sbjct: 611 YGTIIQNFSKIGN-VEAAGEILELMAK 636
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 130/296 (43%), Gaps = 45/296 (15%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD +Y LID CK +V++AY++ E+MR D +++ ++I L G+
Sbjct: 150 MLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTFMTLIEALSNHGK 209
Query: 61 PDKARDVLKEMKEYGCYP------------------DAA-----------------AYNA 85
D+A ++ +EM E G P D A AYN+
Sbjct: 210 LDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNS 269
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
+ YC R+ D L+ +MVE P+ TYN+ F +N L + L+ + G
Sbjct: 270 LMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALELFKLLSSYG 329
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
C PN + +++ +++E A +++ ++ ++ + L D ++ EA
Sbjct: 330 CKPNAATYTTIIQGLYDAQRMEEAKAFFDEALD------VISYTTVIKGLADSKRIDEAC 383
Query: 206 KSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLSNKMALFGPSMIPKREEY 260
+ F ++ G P+ V++ I L++ ++ L+N + + G S +P R Y
Sbjct: 384 ELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFED---MSGSSCVPTRTTY 436
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 101/228 (44%), Gaps = 36/228 (15%)
Query: 26 VEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNA 85
+E+A +++M + PDV++ ++ GL + DKA ++ EM GC P +YN
Sbjct: 1 MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNT 60
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF-----------------------F 122
I ++ +A + M++ G P+ + F
Sbjct: 61 VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRF 120
Query: 123 R--VFYWSN---------DLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQ 171
R VF +++ DL + + + M+ GC+P+ + L+ + +V+ A +
Sbjct: 121 RPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYE 180
Query: 172 LWNDMVEKG-FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
L+ M + G G Y+ L + L + GKL EA + + EMIE+G++P
Sbjct: 181 LFERMRKSGCLGDYVTFM-TLIEALSNHGKLDEACELYREMIERGYEP 227
>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63130, mitochondrial; Flags: Precursor
gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 117/223 (52%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E + P++V+++ LID + K+ ++ +A K+ ++M I PD+ +Y+S+I G + +
Sbjct: 317 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 376
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A+ + + M C+P+ YN I+ +C AKR+ + L EM ++GL N TY
Sbjct: 377 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTT 436
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F+ + + ++ ++ +M+ G LP+ + L+ KVE AL ++ +
Sbjct: 437 LIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSK 496
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I +++ + +C GK+ + F + KG KP+ V++
Sbjct: 497 MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTY 539
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 102/223 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++G +PDIV+ N L++ +C ++ A +V +M + PD ++ ++I GL +
Sbjct: 142 MMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNR 201
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++ M GC PD Y + C + A L+ +M + + P YN
Sbjct: 202 ASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNT 261
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++ + NL+ M G PN + L++ + A +L +DM+E+
Sbjct: 262 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 321
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ L D GKLVEAEK + EMI++ P ++
Sbjct: 322 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 364
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 108/220 (49%), Gaps = 2/220 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P IV ++ L+ K + + + E+M++ IS ++ +Y+ +I Q A V
Sbjct: 79 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAV 138
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L +M + G PD N+ + +C R+ DA L+ +MVE G P++ T+N +
Sbjct: 139 LAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFR 198
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYIL 186
N + L RM+ GC P+ + +V LCKR + +++AL L M + ++
Sbjct: 199 HNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGD-IDLALSLLKKMEQGKIEPGVV 257
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + + D LC+ + +A F EM KG +P+ V++ +
Sbjct: 258 IYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 297
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 104/219 (47%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G +PD+V+Y +++ CK ++ A +++KM I P V+ Y +II L + A
Sbjct: 216 GCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDA 275
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++ EM G P+ YN+ IR C R DAS L+ +M+E+ ++PN T++
Sbjct: 276 LNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 335
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
F L + LY M+ P+ + L+ ++++ A ++ M+ K
Sbjct: 336 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 395
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + L C ++ E + F EM ++G + V++
Sbjct: 396 VVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTY 434
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 103/223 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ +G+ ++ +Y+ LI+ +C+ Q+ A ++ KM PD+++ S++ G +
Sbjct: 107 MQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNR 166
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A ++ +M E G PD+ +N I R +A L+D MV KG P+ TY +
Sbjct: 167 ISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGI 226
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
D+ + +L +M P ++ + V AL L+ +M KG
Sbjct: 227 VVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKG 286
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + L LC+ G+ +A + +MIE+ P+ V+F
Sbjct: 287 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTF 329
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 114/228 (50%), Gaps = 10/228 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + ++P +V YN +ID C + V A + +M ++ I P+V++Y S+I L G+
Sbjct: 247 MEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGR 306
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +L +M E P+ ++A I + +L +A L DEM+++ + P+ TY+
Sbjct: 307 WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 366
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + L + +++ M+ C PN + L+K + ++V+ ++L+ +M ++G
Sbjct: 367 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRG 426
Query: 181 F-GSYILVSDVLFDLL----CDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G+ + + ++ CD ++V F +M+ G P +++
Sbjct: 427 LVGNTVTYTTLIHGFFQARECDNAQIV-----FKQMVSDGVLPDIMTY 469
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 5/144 (3%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV PDI++Y+ L+D C + +VE A + E ++ + PD+ +Y +I G+ G+ +
Sbjct: 461 GVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDG 520
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
D+ + G P+ Y + +C +A L EM E+G P++ TYN R
Sbjct: 521 WDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRA 580
Query: 125 FYWSNDLRSSWNLY-----CRMMG 143
D +S L CR +G
Sbjct: 581 HLRDGDKAASAELIREMRSCRFVG 604
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 42/78 (53%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GVKP++V+Y ++ +C+ E+A + +M++E PD +Y ++I G +
Sbjct: 531 GVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAAS 590
Query: 65 RDVLKEMKEYGCYPDAAA 82
++++EM+ DA+
Sbjct: 591 AELIREMRSCRFVGDAST 608
Score = 37.7 bits (86), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 33/162 (20%), Positives = 64/162 (39%)
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
D A ++ +M + +P ++ + + L ++M G+S N TY++
Sbjct: 63 DDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIL 122
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
F + L + + +MM G P+ + L+ ++ A+ L MVE G+
Sbjct: 123 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGY 182
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ L L + EA M+ KG +P V++
Sbjct: 183 QPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTY 224
>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 117/240 (48%), Gaps = 1/240 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G++P ++++N +I++ CK +V++A I+ + D P+ +YTS+I G
Sbjct: 193 MLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHN 252
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A + M + GC P++ Y+ I C RL +A +++EMV+KG+ P TY +
Sbjct: 253 LDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTI 312
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + L +M GC+PN Q+ L+ R K EIA+ L++ M+ G
Sbjct: 313 PLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADG 372
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
+ + L + LC G+ A F M+ G PS ++ IK + + Q+A+
Sbjct: 373 LVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAM 432
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 104/206 (50%), Gaps = 2/206 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G P++++YN LI YCK + A +++E M+ + PD +YT +I G G+
Sbjct: 438 MLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGK 497
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A + M E+G P+ Y A I Y ++ DA L +MVE G P++ TYN+
Sbjct: 498 LEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNV 557
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEK 179
F +N + + N +M+ G LPN + F+ LC R + +A +++++M ++
Sbjct: 558 MISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLC-RNGRTGLAFKIFHEMEKR 616
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAE 205
+ + L LC G+ +AE
Sbjct: 617 NYFPNLYTYSSLIYGLCQEGRAEDAE 642
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 120/256 (46%), Gaps = 2/256 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G P+I ++ LI +D + E A + KM + + P ++Y ++I L + G+
Sbjct: 333 MKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGR 392
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A + K M +G P YN I+ +C+ ++ A + D+M++ G SPN TYN
Sbjct: 393 FETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNT 452
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ +L ++ L M G G P+ + L+ R K+E A L+ M+E G
Sbjct: 453 LIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHG 512
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ + D ++ K+ +A F +M+E G+ PS ++ + + N +
Sbjct: 513 ISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAE 572
Query: 241 NLSNKMALFG--PSMI 254
N KM G P++I
Sbjct: 573 NFCGKMVKQGLLPNVI 588
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 118/252 (46%), Gaps = 2/252 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P +YN +I +C ++KA I +KM SP+VI+Y ++I G G
Sbjct: 403 MLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGN 462
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A +L+ MK G PDA Y I + +L A+ L M+E G+SPN TY
Sbjct: 463 LNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTA 522
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++ + + L+ +M+ +G LP++Q+ ++ + + A MV++G
Sbjct: 523 IIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQG 582
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEA- 238
++ D LC G+ A K F EM ++ + P+ ++ I L + ++A
Sbjct: 583 LLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAE 642
Query: 239 LQNLSNKMALFG 250
+ NL ++ +G
Sbjct: 643 MYNLLARLTHYG 654
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 116/258 (44%), Gaps = 2/258 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G P+ V+Y+ LI+ C + ++E+A ++E+M + I P V +YT + L G +A
Sbjct: 267 GCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEA 326
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++L +MK+ GC P+ + A I + A GL +M+ GL P TYN
Sbjct: 327 VELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQ 386
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+++ ++ M+ G LP+TQ+ ++K ++ A+ +++ M++ G
Sbjct: 387 LCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPN 446
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSN 244
++ + L C G L A + M G KP ++ + + K E +L
Sbjct: 447 VITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFY 506
Query: 245 KMALFGPSMIPKREEYLA 262
M G S P Y A
Sbjct: 507 GMMEHGIS--PNHVTYTA 522
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 104/219 (47%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P+ +Y LI +C++ ++ A+ + ++M + P+ ++Y+++I GL G+ ++A D+
Sbjct: 235 PNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDM 294
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L+EM + G P Y + + C A +A L+ +M ++G PN T+
Sbjct: 295 LEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSR 354
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ LY +M+ G +P T + L+ + + E A ++ M+ G
Sbjct: 355 DGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQT 414
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + C MG + +A F +M++ G P+ +++ +
Sbjct: 415 YNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTL 453
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 103/240 (42%), Gaps = 1/240 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G++P + +Y + C +A +++ KM+ P++ ++T++I GL G+
Sbjct: 298 MVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGK 357
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A + +M G P YNA I C+ R A + M+ G P+ TYN
Sbjct: 358 FEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNE 417
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ F D++ + ++ +M+ G PN + L+ +Q + A++L M G
Sbjct: 418 IIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNG 477
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
L GKL A F M+E G P+ V++ I LA +AL
Sbjct: 478 LKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDAL 537
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 114/295 (38%), Gaps = 72/295 (24%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G+KPD +Y LI + + ++E A + M + ISP+ ++YT+II G + +
Sbjct: 473 MKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAK 532
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A + +M E G P + YN I + + +A +MV++GL PN TY
Sbjct: 533 VDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTS 592
Query: 121 F-------------FRVF-------YWSNDLRSS-----------------WNLYCRMMG 143
F F++F Y+ N S +NL R+
Sbjct: 593 FIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTH 652
Query: 144 TGCLPNTQSCMFLVK-LCK----------------------------------RQEKVEI 168
GC PN + LVK LC + KVE
Sbjct: 653 YGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVES 712
Query: 169 ALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
AL ++ M GF ++ L LC + EA+ F M+EK +V++
Sbjct: 713 ALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAW 767
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 98/203 (48%), Gaps = 4/203 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ P++++Y ID C++ + A+KI +M + P++ +Y+S+I GL G+
Sbjct: 578 MVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGR 637
Query: 61 PDKAR--DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
+ A ++L + YGC P+ Y ++ C R +A L+ M +KGL P+ Y
Sbjct: 638 AEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIY 697
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGC-LPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
+ + S+ N++ M G L + + LCK + +E A ++ M+
Sbjct: 698 RALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCK-ENFIEEAQCIFQTML 756
Query: 178 EKGFGSYILVSDVLFDLLCDMGK 200
EK + S + VL D L G+
Sbjct: 757 EKHWNSDEVAWTVLLDGLLKEGE 779
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 113/244 (46%), Gaps = 4/244 (1%)
Query: 21 CKDR-QVEKAYKIVEKMRDE-DISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYP 78
C++ +V++ + + ++ + D + S+T+++ LG D ARD+ +M G P
Sbjct: 141 CRNEGEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRP 200
Query: 79 DAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLY 138
+N I C R+++A +M + PNA TY +++L ++ ++
Sbjct: 201 SLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMF 260
Query: 139 CRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDM 198
RM+ GC PN+ + L+ + ++E A+ + +MV+KG + + LCD
Sbjct: 261 DRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDA 320
Query: 199 GKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFGPSMIPKRE 258
G EA + +M ++G P+ +F + + + K E L +KM G ++P
Sbjct: 321 GCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADG--LVPTTV 378
Query: 259 EYLA 262
Y A
Sbjct: 379 TYNA 382
>gi|297834586|ref|XP_002885175.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331015|gb|EFH61434.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 653
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 109/225 (48%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ + +YN +ID CK R+ E A + +M+D ISP++I++ + + G G K
Sbjct: 414 GLLSSVYTYNAVIDCLCKARRTEHAAMFLTEMQDRGISPNLITFNTFLSGYSAGGDVKKV 473
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
V++++ E+GC PD ++ I C AK ++DA EM+E G+ PN TYN+ R
Sbjct: 474 HGVVEKLLEHGCNPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIKPNEITYNILIRS 533
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ D S L+ M +G PN + +++ + +KV+ A +L M+ G
Sbjct: 534 SCSTGDTGRSVKLFANMKESGLSPNLYAYNAIIQSFCKMKKVKKAEELLKTMLRIGLKPD 593
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKAL 229
L L + G+ EA + F M G P + R ++ L
Sbjct: 594 NFTYSTLIKALSESGRESEAREMFSSMERHGCVPDSYTKRLVEEL 638
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 86/180 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G+ P+++++N + Y V+K + +VEK+ + +PDVI+++ II L +
Sbjct: 445 MQDRGISPNLITFNTFLSGYSAGGDVKKVHGVVEKLLEHGCNPDVITFSLIINCLCRAKE 504
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A D KEM E+G P+ YN IR+ C + L M E GLSPN YN
Sbjct: 505 IKDAFDCFKEMLEWGIKPNEITYNILIRSSCSTGDTGRSVKLFANMKESGLSPNLYAYNA 564
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ F ++ + L M+ G P+ + L+K + A ++++ M G
Sbjct: 565 IIQSFCKMKKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSMERHG 624
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 85/161 (52%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E G PD+++++ +I+ C+ ++++ A+ ++M + I P+ I+Y +I G
Sbjct: 482 EHGCNPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIKPNEITYNILIRSSCSTGDTG 541
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
++ + MKE G P+ AYNA I+++C K+++ A L+ M+ GL P+ TY+
Sbjct: 542 RSVKLFANMKESGLSPNLYAYNAIIQSFCKMKKVKKAEELLKTMLRIGLKPDNFTYSTLI 601
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQ 163
+ S + ++ M GC+P++ + + +L RQ
Sbjct: 602 KALSESGRESEAREMFSSMERHGCVPDSYTKRLVEELDLRQ 642
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 96/225 (42%), Gaps = 2/225 (0%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E G PD ++N ++ K + + I + P Y ++ L L Q
Sbjct: 342 ERGYIPDSSTFNAAMNCLLKGHHLVETCGIFDCFVSRGAKPGFNGYLVLVQAL-LNAQRF 400
Query: 63 KARD-VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
A D LK+M G YNA I C A+R A+ + EM ++G+SPN T+N F
Sbjct: 401 SAGDRYLKQMGGDGLLSSVYTYNAVIDCLCKARRTEHAAMFLTEMQDRGISPNLITFNTF 460
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
+ D++ + +++ GC P+ + ++ R ++++ A + +M+E G
Sbjct: 461 LSGYSAGGDVKKVHGVVEKLLEHGCNPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGI 520
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ ++L C G + K F M E G P+ ++ I
Sbjct: 521 KPNEITYNILIRSSCSTGDTGRSVKLFANMKESGLSPNLYAYNAI 565
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 63/123 (51%), Gaps = 1/123 (0%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
+G+KP YN +ID K + AY ++MR +D PD +Y +I G+ G D+
Sbjct: 168 LGMKPSTRLYNAVIDALVKSNSLNLAYVKFQQMRSDDCKPDRFTYNILIHGVCKKGVVDE 227
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPN-ATTYNLFF 122
A ++K+M+ G P+ Y I + IA R+ +A ++ M + L+PN AT L
Sbjct: 228 AIRLVKQMEREGNRPNVFTYTILIDGFLIAGRIEEALKQLEMMQVRKLNPNEATIRTLVH 287
Query: 123 RVF 125
+F
Sbjct: 288 GIF 290
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/258 (20%), Positives = 106/258 (41%), Gaps = 35/258 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR KPD +YN LI CK V++A ++V++M E P+V +YT +I G + G+
Sbjct: 200 MRSDDCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEREGNRPNVFTYTILIDGFLIAGR 259
Query: 61 PDKARDVLKEMKE-----------------YGCYPDAAAY---------NAAIRN----- 89
++A L+ M+ + C P A+ N+ ++
Sbjct: 260 IEEALKQLEMMQVRKLNPNEATIRTLVHGIFRCLPPCEAFEVLLGFMEKNSILQRVAYDT 319
Query: 90 --YCIAKR--LRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
YC++ ++ + + + E+G P+++T+N + L + ++ + G
Sbjct: 320 VLYCLSNNSMAKETALFLRKTGERGYIPDSSTFNAAMNCLLKGHHLVETCGIFDCFVSRG 379
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
P + LV+ ++ + M G S + + + D LC + A
Sbjct: 380 AKPGFNGYLVLVQALLNAQRFSAGDRYLKQMGGDGLLSSVYTYNAVIDCLCKARRTEHAA 439
Query: 206 KSFLEMIEKGHKPSQVSF 223
EM ++G P+ ++F
Sbjct: 440 MFLTEMQDRGISPNLITF 457
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 52/80 (65%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E G+ P++ +YN +I +CK ++V+KA ++++ M + PD +Y+++I L G+
Sbjct: 550 MKESGLSPNLYAYNAIIQSFCKMKKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGR 609
Query: 61 PDKARDVLKEMKEYGCYPDA 80
+AR++ M+ +GC PD+
Sbjct: 610 ESEAREMFSSMERHGCVPDS 629
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 59/120 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+KP+ ++YN LI C ++ K+ M++ +SP++ +Y +II + +
Sbjct: 515 MLEWGIKPNEITYNILIRSSCSTGDTGRSVKLFANMKESGLSPNLYAYNAIIQSFCKMKK 574
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA ++LK M G PD Y+ I+ + R +A + M G P++ T L
Sbjct: 575 VKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSMERHGCVPDSYTKRL 634
>gi|302765176|ref|XP_002966009.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
gi|300166823|gb|EFJ33429.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
Length = 413
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 108/229 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ PD +YN +IDV + EKAY M+ SPDV++Y +++ GL + +
Sbjct: 178 MNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRR 237
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A D+ EM+ C PD + I A R+ DA +V+ G PN+ YN
Sbjct: 238 TDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHVPNSYIYNA 297
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F S + + L+ M+ C P++ + LV R+ +A++L +MV +G
Sbjct: 298 LISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREG 357
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKAL 229
+ +VL L G++ +A F EMI KG P ++ + L
Sbjct: 358 HTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSALPNL 406
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 104/241 (43%), Gaps = 3/241 (1%)
Query: 1 MREM-GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDE-DISPDVISYTSIIGGLGLV 58
MRE PD+V+YN LI YCK ++A + +++ E P+ +S+ +++ L +
Sbjct: 1 MRETCDCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKM 60
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
+ A V +EM G D N I C LR A L+ M + TY
Sbjct: 61 SRATDALAVFQEMLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTY 120
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
+ + + ++ M GC+P+T L+ +Q KV+ AL+L DM
Sbjct: 121 SYLMDALGKAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNR 180
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQE 237
KG +++ D+L G+ +A F M + H P V++ + L +L E
Sbjct: 181 KGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDE 240
Query: 238 A 238
A
Sbjct: 241 A 241
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 101/217 (46%), Gaps = 4/217 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G++ D+ N LI C+ + +A +++ M DV +Y+ ++ LG G+ KA
Sbjct: 77 GLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSYLMDALGKAGRAAKA 136
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAK--RLRDASGLMDEMVEKGLSPNATTYNLFF 122
+V M++ GC PD YN I C+ K ++ +A L+++M KG+ P+ TYN+
Sbjct: 137 LEVFSNMQKAGCMPDTVVYNVLIS--CLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVI 194
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
V +++ + M P+ + L+ K+ + + A L+++M
Sbjct: 195 DVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCM 254
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
+ L D L G++ +A + +++ GH P+
Sbjct: 255 PDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHVPN 291
>gi|449491189|ref|XP_004158824.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80550,
mitochondrial-like [Cucumis sativus]
Length = 450
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 110/218 (50%), Gaps = 3/218 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV+ D+ SY+ +D+ CK + KA K+ ++M+ + + DV++Y ++I +G+
Sbjct: 213 MDKKGVRKDLHSYSIYMDIQCKSGKPWKAVKLYKEMKKKGMKLDVVAYNTVIHAVGISEG 272
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A V EMKE GC P+ N I+ +C R +DA ++D+M+++ PN TY+
Sbjct: 273 VDFASRVFHEMKEMGCKPNVVTCNTVIKLFCENGRFKDAHMMLDQMLKRDCQPNVITYHC 332
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
FFR ++ L+ RM+ G P + + L++ R + +WN M E G
Sbjct: 333 FFRSLEKPKEILV---LFDRMIKYGVHPKMDTYVMLLRKFGRWGFLRPVFLVWNKMEELG 389
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
+ L D L + G + A K EM+ KG P
Sbjct: 390 CSPNECAYNALIDALVEKGMIDMARKYDEEMVAKGLSP 427
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 95/224 (42%), Gaps = 5/224 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKI-VEKMRDEDISPDVISYTSIIGGLGLVG 59
+RE ++ D S+ LID C+ R V++A ++ K R D + I+ G +G
Sbjct: 143 LREFKLR-DETSFCNLIDALCESRHVDEAQELCFGKNRKLDCDSSTKIHNLILRGWLKMG 201
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
K RD +EM + G D +Y+ + C + + A L EM +KG+ + YN
Sbjct: 202 WWSKCRDFWEEMDKKGVRKDLHSYSIYMDIQCKSGKPWKAVKLYKEMKKKGMKLDVVAYN 261
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
S + + ++ M GC PN +C ++KL + + A + + M+++
Sbjct: 262 TVIHAVGISEGVDFASRVFHEMKEMGCKPNVVTCNTVIKLFCENGRFKDAHMMLDQMLKR 321
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ F L K E F MI+ G P ++
Sbjct: 322 DCQPNVITYHCFFRSL---EKPKEILVLFDRMIKYGVHPKMDTY 362
>gi|449454008|ref|XP_004144748.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Cucumis sativus]
gi|449490811|ref|XP_004158714.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Cucumis sativus]
Length = 621
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 115/244 (47%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
KPDIV++N +++ + ++ A K+ E M+ + SPDV SYT ++ + +A
Sbjct: 344 KPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQAKMKEAVQ 403
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
+EM+ GC PDAA Y I + KR+ GL+ EM G P+ TYN ++
Sbjct: 404 YFEEMQGAGCRPDAAIYTCLITGFGNQKRMDTVYGLLKEMKANGCPPDGKTYNALIKLMT 463
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+ +Y +M+ G P T + ++K + E+ + W++M KG
Sbjct: 464 NKRMPDDAVRIYKKMIENGIKPTTHTYSMMMKSYFQTRNYEMGVAAWDEMKLKGCCPDDN 523
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKM 246
V L +G+ EA K EMIEKG K Q+ + + A A + + L+ L+ KM
Sbjct: 524 SYTVFIGGLISLGRCAEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKM 583
Query: 247 ALFG 250
G
Sbjct: 584 KFSG 587
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 100/223 (44%), Gaps = 1/223 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ K + + NCL+D + + ++A I EK+ +P++ +YT ++ G V
Sbjct: 269 MKKYKYKVGVETINCLLDSLGRAKLGKEALTIFEKLHGR-FTPNLQTYTVLLNGWCRVRN 327
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + +M + PD A+N + K+ DA L + M KG SP+ +Y +
Sbjct: 328 LMEAGKIWNQMIDEDFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSPDVKSYTI 387
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
R F ++ + + M G GC P+ L+ Q++++ L +M G
Sbjct: 388 LVRDFCKQAKMKEAVQYFEEMQGAGCRPDAAIYTCLITGFGNQKRMDTVYGLLKEMKANG 447
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ L L+ + +A + + +MIE G KP+ ++
Sbjct: 448 CPPDGKTYNALIKLMTNKRMPDDAVRIYKKMIENGIKPTTHTY 490
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 53/109 (48%), Gaps = 4/109 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+KP +Y+ ++ Y + R E ++M+ + PD SYT IGGL +G+
Sbjct: 478 MIENGIKPTTHTYSMMMKSYFQTRNYEMGVAAWDEMKLKGCCPDDNSYTVFIGGLISLGR 537
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEK 109
+A L+EM E G YN ++ A R +++E+ +K
Sbjct: 538 CAEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGR----PDILEELAQK 582
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 96/237 (40%), Gaps = 38/237 (16%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G D +YN ++ + K RQ E ++E+M ++++ + ++T + KA
Sbjct: 204 GFAHDSKTYNTMMTILGKTRQFETMVSLLEEMAEKELL-TMETFTVCFKAFAAAKERKKA 262
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
VL+ MK+Y N + + AK ++A + +++ + +PN TY +
Sbjct: 263 VGVLELMKKYKYKVGVETINCLLDSLGRAKLGKEALTIFEKLHGR-FTPNLQTYTVLL-- 319
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
N +CR+ + A ++WN M+++ F
Sbjct: 320 -----------NGWCRV----------------------RNLMEAGKIWNQMIDEDFKPD 346
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEALQ 240
I+ + + + L K +A K F M KG P S+ ++ + A +EA+Q
Sbjct: 347 IVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQAKMKEAVQ 403
>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 584
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 102/228 (44%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G PD+V+YN +I +C +++ A +I E++ ++ P VI+YT +I L G
Sbjct: 164 MKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTILIEATILDGG 223
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A +L EM G PD YNA IR C + A L+ + +G P+ TYN+
Sbjct: 224 IDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNI 283
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
R L M+ GC PN + L+ R KVE A+ L M EKG
Sbjct: 284 LLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKG 343
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKA 228
D L C G+L A + MI G P V++ I A
Sbjct: 344 LKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMA 391
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 122/253 (48%), Gaps = 10/253 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G KP++V+++ LI C+D +VE+A ++ M+++ + PD Y +I G G+
Sbjct: 304 MISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGR 363
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A + L+ M GC PD YN + C + A + +++ E G PN ++YN
Sbjct: 364 LDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNT 423
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + S D + + +++ G P+ + L+ R V+ A++L DM
Sbjct: 424 LFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGR 483
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQ---------VSFRRIKA-LM 230
+ ++ +++ LC + + +A + M EKG +P++ + F ++A M
Sbjct: 484 YRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLRAEAM 543
Query: 231 ELANKQEALQNLS 243
ELAN + +S
Sbjct: 544 ELANSLHGMNAIS 556
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 102/212 (48%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
KPD+ +YN LI + K Q+E A +++++M+ PDV++Y +IG G+ D A +
Sbjct: 135 KPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALE 194
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
+ +E+ + C P Y I + + A L+DEM+ KGL P+ TYN R
Sbjct: 195 IFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMC 254
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+ ++ L + GC P+ + L++ + K +L ++M+ G ++
Sbjct: 255 KEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVV 314
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
+L LC GK+ EA M EKG KP
Sbjct: 315 THSILIGTLCRDGKVEEAVNLLRSMKEKGLKP 346
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 107/246 (43%), Gaps = 1/246 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G PD++ LI + R + KA +++E + PDV +Y ++I G Q
Sbjct: 95 MVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYG-KPDVFAYNALISGFIKANQ 153
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A VL MK G PD YN I ++C +L A + +E+++ P TY +
Sbjct: 154 LENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTI 213
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + L M+ G P+T + +++ ++ V+ A +L + +G
Sbjct: 214 LIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRG 273
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
I+ ++L L GK E EK EMI G KP+ V+ + + K E
Sbjct: 274 CKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAV 333
Query: 241 NLSNKM 246
NL M
Sbjct: 334 NLLRSM 339
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 110/235 (46%), Gaps = 1/235 (0%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
+P +++Y LI+ D ++ A K++++M + + PD ++Y +II G+ DKA +
Sbjct: 205 EPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFE 264
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
+L+ + GC PD YN +R + + L+ EM+ G PN T+++
Sbjct: 265 LLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLC 324
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+ + NL M G P+ L+ R+ ++++A + M+ G I+
Sbjct: 325 RDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIV 384
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI-KALMELANKQEALQ 240
+ + LC GK +A + F ++ E G P+ S+ + AL ++ AL+
Sbjct: 385 NYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALE 439
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 100/208 (48%), Gaps = 1/208 (0%)
Query: 16 LIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYG 75
L++ C+ + ++ +E M D+ +PDVI T +I G KA V++ ++ YG
Sbjct: 75 LLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYG 134
Query: 76 CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSW 135
PD AYNA I + A +L +A+ ++D M +G P+ TYN+ F L +
Sbjct: 135 -KPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLAL 193
Query: 136 NLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLL 195
++ ++ C P + L++ +++A++L ++M+ KG L + + +
Sbjct: 194 EIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGM 253
Query: 196 CDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
C + +A + + +G KP +++
Sbjct: 254 CKEMMVDKAFELLRSLSSRGCKPDIITY 281
>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial [Vitis vinifera]
gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 114/229 (49%), Gaps = 6/229 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDED-----ISPDVISYTSIIGGL 55
M+EM ++P++V++ LI+ CK R+V++A ++ EKM + + PDVI+Y ++I GL
Sbjct: 331 MKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGL 390
Query: 56 GLVGQPDKARDVLKEMK-EYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPN 114
VG+ ++ +++ M+ + C P+ YN I YC A + A L D+M + G+ PN
Sbjct: 391 CKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPN 450
Query: 115 ATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWN 174
T N + + + M G G N + L++ +E A++L++
Sbjct: 451 VVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFD 510
Query: 175 DMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+M+E G +V L L GKL A +M E G P VSF
Sbjct: 511 EMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSF 559
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 119/262 (45%), Gaps = 3/262 (1%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDED-ISPDVISYTSIIGGLGLVGQPDKA 64
V+PD+++YN LID CK + E+ +VE+MR + P+ ++Y +I G + A
Sbjct: 376 VEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAA 435
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
R++ +M + G P+ N + C R+ A +EM KGL NA TY R
Sbjct: 436 RELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRA 495
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
F N++ + L+ M+ GC P+ L+ + K++ A + + M E GF
Sbjct: 496 FCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPD 555
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSN 244
I+ +VL + C KL EA + EM G KP V++ + + L
Sbjct: 556 IVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMK 615
Query: 245 KMALFGPSMIPKREEYLAEMSA 266
KM G ++P Y A + A
Sbjct: 616 KMVKEG--LVPTVVTYGALIHA 635
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 116/233 (49%), Gaps = 2/233 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G+K + V+Y LI +C +EKA ++ ++M + SPD I Y ++I GL G+
Sbjct: 477 MQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGK 536
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A VL +MKE G PD ++N I +C +L +A ++ EM G+ P+ TYN
Sbjct: 537 LDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNT 596
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + D ++ L +M+ G +P + L+ ++ A++++ DM
Sbjct: 597 LISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTS 656
Query: 181 -FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI-KALME 231
++ ++L + LC ++ A +M KG KP+ +F + K L E
Sbjct: 657 KVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQE 709
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 102/226 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV P++V+ N L+D CK ++ A + +M+ + + + ++YT++I V
Sbjct: 442 MNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNN 501
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA ++ EM E GC PDA Y I A +L AS ++ +M E G SP+ ++N+
Sbjct: 502 IEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNV 561
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F N L ++ + M G P+ + L+ + A +L MV++G
Sbjct: 562 LINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEG 621
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ L C G L EA K F +M P I
Sbjct: 622 LVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNI 667
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 105/214 (49%), Gaps = 2/214 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E G PDIVS+N LI+ +C+ ++++AY+++++M + I PD ++Y ++I G
Sbjct: 547 MKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGD 606
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKG-LSPNATTYN 119
A ++K+M + G P Y A I YC+ L +A + +M + PN YN
Sbjct: 607 FSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYN 666
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ N + + +L M G PNT + + K + + + A +L + M E
Sbjct: 667 ILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEH 726
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIE 213
+ ++L + L +G+ + KSF++ E
Sbjct: 727 ACNPDYITMEILTEWLSAVGETAKL-KSFVQGYE 759
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 121/262 (46%), Gaps = 8/262 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+ ++G + S N L+ + R+ ++ ++ +M++ DI P+V+++ +I L +
Sbjct: 296 LMKLGGVMEAASCNALLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRR 355
Query: 61 PDKARDVLKEM-----KEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEM-VEKGLSPN 114
D+A +V ++M + PD YN I C R + GL++ M + PN
Sbjct: 356 VDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPN 415
Query: 115 ATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWN 174
TYN + ++ + ++ L+ +M G PN + LV + ++ A++ +N
Sbjct: 416 TVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFN 475
Query: 175 DMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELAN 234
+M KG + L C++ + +A + F EM+E G P + + + + + A
Sbjct: 476 EMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAG 535
Query: 235 KQEALQNLSNKM--ALFGPSMI 254
K + + +KM A F P ++
Sbjct: 536 KLDRASFVLSKMKEAGFSPDIV 557
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 112/256 (43%), Gaps = 42/256 (16%)
Query: 27 EKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAA 86
E+ +V K + ++ P+ I T +I L G+ D+A DVL + + G +AA+ NA
Sbjct: 252 EEIVGLVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNAL 311
Query: 87 IRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF------FR-------VFYWSNDLRS 133
+ A+ + + L+ EM E + PN T+ + FR VF N S
Sbjct: 312 LTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGES 371
Query: 134 SWNL--------------YCRM----MGTG----------CLPNTQSCMFLVKLCKRQEK 165
+ L C++ G G C+PNT + L+ +
Sbjct: 372 NGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASM 431
Query: 166 VEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR 225
+E A +L++ M + G ++ + L D +C G++ A + F EM KG K + V++
Sbjct: 432 IEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTA 491
Query: 226 -IKALMELANKQEALQ 240
I+A + N ++A++
Sbjct: 492 LIRAFCNVNNIEKAME 507
>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 113/223 (50%), Gaps = 5/223 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G+ P++ +YN L+ CK+ +V+ A+K+ +M ++ PD ++YT+++ L G+
Sbjct: 170 MKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGK 229
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D AR++ K P YNA I C R+ A L+ EM++ G+ PN +Y+
Sbjct: 230 IDDARELAGRFK-----PSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSC 284
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
S ++ ++ L+ +M GC N + L+K C + K+ AL LW M++ G
Sbjct: 285 IINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDG 344
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + L LC G L EA + +M G P+ ++
Sbjct: 345 CEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTY 387
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 114/242 (47%), Gaps = 5/242 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV P++VSY+C+I+ C VE A+ + +M ++ ++T +I G + G+
Sbjct: 270 MMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGK 329
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A D+ K M + GC P+ AYN I C L +A + D+M G PN TTY++
Sbjct: 330 LYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSI 389
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPN--TQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
F S DL + + RM+ GC PN T +CM V LCK + A L M
Sbjct: 390 LIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDV-LCK-NSMFDQANSLVEKMTL 447
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQE 237
+G + + LC G++ A K M G P+ ++ + AL + +E
Sbjct: 448 EGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEE 507
Query: 238 AL 239
A
Sbjct: 508 AF 509
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 104/224 (46%), Gaps = 1/224 (0%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
KP + YN LID CK+ ++E A K++ +M D + P+V+SY+ II L + G + A
Sbjct: 241 KPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFA 300
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
+ +M GC + + I+ + +L +A L M++ G PN YN
Sbjct: 301 LFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLC 360
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+ L + + +M +GCLPN + L+ + + A + WN M+ G ++
Sbjct: 361 SNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVV 420
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKAL 229
+ D+LC +A +M +G P+ ++F IK L
Sbjct: 421 TYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGL 464
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 106/226 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G +P++V+YN LI C + +E+A ++ ++M+ P+V +Y+ +I G G
Sbjct: 340 MIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGD 399
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A + M +GC P+ Y + C A+ L+++M +G +PN T+N
Sbjct: 400 LVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNT 459
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + + + + L RM G GCLPN + L+ R K E A L+ ++ +
Sbjct: 460 FIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARN 519
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ + + G + EA + F + + +G P +++ +
Sbjct: 520 LQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTM 565
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 91/172 (52%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G +P++V+Y C++DV CK+ ++A +VEKM E +P+ I++ + I GL G+
Sbjct: 410 MISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGR 469
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A +L+ M+ +GC P+ YN + + +A GL E+ + L PN TYN
Sbjct: 470 VEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNT 529
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQL 172
F + + + L+ + + G P++ + ++ +Q KV+IA QL
Sbjct: 530 VLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQL 581
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 99/215 (46%), Gaps = 5/215 (2%)
Query: 12 SYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEM 71
+Y +I+ ++ +++ I+++M+ + I+ + II G VG ++A + +
Sbjct: 76 TYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRI 135
Query: 72 KEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDL 131
E+GC P YN + + + + L M + GL PN TYN+ + ++ +
Sbjct: 136 GEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRV 195
Query: 132 RSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVL 191
++ L+ M GC P+ + +V + K++ A +L F + V + L
Sbjct: 196 DAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAREL-----AGRFKPSVPVYNAL 250
Query: 192 FDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
D +C G++ A K EM++ G P+ VS+ I
Sbjct: 251 IDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCI 285
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 86/182 (47%), Gaps = 3/182 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G P+I +YN L+D + + E+A+ + +++ ++ P++++Y +++ G G
Sbjct: 480 MQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGM 539
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVE-KGLSPNATTY- 118
+A + + G PD+ YN I YC +++ A+ L++ + K P+ TY
Sbjct: 540 MGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYT 599
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
+L + W N + + + + G PN + LV+ + + +D++
Sbjct: 600 SLIWGACNWMN-IEEAMAFLDKAINQGICPNFATWNALVRCFFDSLGHMGPIHILDDILR 658
Query: 179 KG 180
KG
Sbjct: 659 KG 660
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 54/117 (46%), Gaps = 3/117 (2%)
Query: 137 LYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLC 196
++ R+ GC P + L+ + K ++ L+ +M + G + ++L LC
Sbjct: 131 MFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALC 190
Query: 197 DMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFGPSM 253
++ A K F+EM KG P V++ + + + A K + + L+ + F PS+
Sbjct: 191 KNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGR---FKPSV 244
>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 109/226 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GVKPD+V+YN +ID CK R ++KA ++ +M + PD ++Y+ +I G +G+
Sbjct: 291 MTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGR 350
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + +EMK+ G P+ N+ + + C R ++A+ D M KG P+ +Y
Sbjct: 351 LKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCT 410
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L+ M G N L+ ++ V+ A+ ++ +M ++G
Sbjct: 411 LLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQG 470
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ + MG+L +A + F +M+ +G +P+ + I
Sbjct: 471 VSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSI 516
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 88/183 (48%), Gaps = 4/183 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDED--ISPDVISYTSIIGGLGLV 58
M E+G P+ VSY+ ++ C + ++A +++ M + SPDV++Y+++I G
Sbjct: 219 MSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIHGFFNE 278
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
G+ KA + EM G PD YN I C A+ + A ++ +M G P+ TY
Sbjct: 279 GETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTY 338
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSC-MFLVKLCKRQEKVEIALQLWNDMV 177
+ + L+ + ++ M G +PN +C FL LCK E A + ++ M
Sbjct: 339 SCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAA-EFFDSMT 397
Query: 178 EKG 180
KG
Sbjct: 398 AKG 400
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 97/219 (44%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD+V+Y+ +I + + + KA + +M + + PDV++Y II L DKA V
Sbjct: 263 PDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELV 322
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L++M G PD Y+ I Y RL++A+ + EM ++GL PN T N F
Sbjct: 323 LRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCK 382
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ + + M G P+ S L+ + + L+N M G + V
Sbjct: 383 HGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHV 442
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+L G + +A F EM ++G P V++ +
Sbjct: 443 FTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTV 481
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 103/230 (44%), Gaps = 4/230 (1%)
Query: 1 MREM---GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGL 57
+R+M G +PD V+Y+C+I Y ++++A K+ +M+ + P++++ S + L
Sbjct: 323 LRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCK 382
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
G+ +A + M G PD +Y + Y D GL + M G++ N
Sbjct: 383 HGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHV 442
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
+ + + + + ++ M G P+ + ++ R ++ A++ +N MV
Sbjct: 443 FTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMV 502
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG-HKPSQVSFRRI 226
+G V + C G LV+A++ EMI KG +P V F +
Sbjct: 503 ARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSV 552
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 101/218 (46%), Gaps = 2/218 (0%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
+PDIV ++ +I+ CKD +V A+ I + D P VI++ S+I G LVG+ DKA
Sbjct: 543 RPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFK 602
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
+L M+ G PD YN + Y R+ D L EM KG+ PN TY + +
Sbjct: 603 ILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLF 662
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQ-SCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ ++ + M+ +G + L LC R + A+ L+ + I
Sbjct: 663 RAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLC-RNNCADEAIILFQKLGTMNVKFSI 721
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + + + + + + EA++ F + G P++ ++
Sbjct: 722 TILNTMINAMYKVQRKEEAKELFATISASGLLPNESTY 759
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 100/251 (39%), Gaps = 36/251 (14%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G+ + + LI Y K V+ A I +M+ + +SPDV++Y+++I +G+
Sbjct: 431 MKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGR 490
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLS-------- 112
A + +M G P+ A Y++ I+ +C+ L A L+ EM+ KG+
Sbjct: 491 LTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFS 550
Query: 113 ----------------------------PNATTYNLFFRVFYWSNDLRSSWNLYCRMMGT 144
P T+N + + ++ + M
Sbjct: 551 SVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVV 610
Query: 145 GCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEA 204
G P+ + L+ + ++ L L+ +M KG + ++ L G+ V A
Sbjct: 611 GVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAA 670
Query: 205 EKSFLEMIEKG 215
K F EMIE G
Sbjct: 671 RKKFHEMIESG 681
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 95/226 (42%), Gaps = 5/226 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G KPDI SY L+ Y + + M+ I+ + +T +I G
Sbjct: 396 MTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGM 455
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A + EM++ G PD Y+ I + RL DA ++MV +G+ PN Y+
Sbjct: 456 VDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSS 515
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMF---LVKLCKRQEKVEIALQLWNDMV 177
+ F L + L M+ G +P F + LCK +V A +++
Sbjct: 516 IIQGFCMHGGLVKAKELVSEMINKG-IPRPDIVFFSSVINSLCK-DGRVMDAHDIFDLAT 573
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ G ++ + L D C +GK+ +A K M G +P V++
Sbjct: 574 DIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTY 619
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 62/120 (51%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
++G +P ++++N LID YC +++KA+KI++ M + PD+++Y +++ G G+ +
Sbjct: 574 DIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRIN 633
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
+ +EM+ G P+ Y + A R A EM+E G + + Y +
Sbjct: 634 DGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIIL 693
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 108/247 (43%), Gaps = 16/247 (6%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +GV+PDIV+YN L+D Y K+ ++ + +M+ + + P+ ++Y ++ GL G+
Sbjct: 607 MEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGR 666
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
AR EM E G + Y + C +A L ++ + + T N
Sbjct: 667 TVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNT 726
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
Y + L+ + +G LPN + ++ + VE A +++ M + G
Sbjct: 727 MINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSG 786
Query: 181 F--GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEA 238
GS +L + + +L + G++ +A G+ S+V +RI L+E +
Sbjct: 787 IVPGSRLL--NRIIRMLLEKGEIAKA----------GNYLSKVDGKRI--LLEASTTSLM 832
Query: 239 LQNLSNK 245
L S K
Sbjct: 833 LSLFSRK 839
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 104/254 (40%), Gaps = 38/254 (14%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P +YN L+D C+ R+ + + + + D I+ +++ L + ++A +V
Sbjct: 155 PTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYANRTEEAVNV 214
Query: 68 L-KEMKEYGCYPDAAAYNAAIRNYC---IAKRLRD------------------------- 98
L M E GC P+A +Y+ ++ C +++R D
Sbjct: 215 LLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIHG 274
Query: 99 ---------ASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPN 149
A L EM +G+ P+ TYNL + + + + +M G P+
Sbjct: 275 FFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPD 334
Query: 150 TQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFL 209
T + ++ +++ A +++ +M ++G I+ + LC G+ EA + F
Sbjct: 335 TVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFD 394
Query: 210 EMIEKGHKPSQVSF 223
M KGHKP S+
Sbjct: 395 SMTAKGHKPDIFSY 408
>gi|224114285|ref|XP_002316718.1| predicted protein [Populus trichocarpa]
gi|222859783|gb|EEE97330.1| predicted protein [Populus trichocarpa]
Length = 684
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 129/277 (46%), Gaps = 35/277 (12%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G + D V Y+ ++D YCK+ ++++A +IV +M PDV++YT+II G G+ +A
Sbjct: 288 GFQVDKVGYSAIVDSYCKEGRMDQAKEIVNEMFTRGCIPDVVTYTAIINGFSQAGEVGQA 347
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
R +L++M ++GC P+ +Y A ++ C +A +M E+ +PNA TY++
Sbjct: 348 RKMLQQMYKHGCKPNTVSYTAFLKGLCQKGNSSEAREMMKASEEQWWTPNAITYSVVMHG 407
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPN-TQSCMFLVKLCK---------------------- 161
F L + ++ M+G G P + + L LC+
Sbjct: 408 FRREGKLSDACDVVREMIGKGFFPTPVEINLLLQSLCRIGRVDEAKKFMEECLNMGCAVN 467
Query: 162 ------------RQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFL 209
+Q+ +E AL L +DM + + D L G++ EA + L
Sbjct: 468 AVNFTTVIHRFCQQDDIEAALSLLDDMYLSNKHPDAVTYTTIIDALGKKGRIEEATELTL 527
Query: 210 EMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKM 246
+M++KG P+ V++R + + E L NL +KM
Sbjct: 528 KMLKKGIDPTPVTYRTVIHRYGQIGRVEDLLNLLDKM 564
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 114/257 (44%), Gaps = 35/257 (13%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PD VSY ++ CK+R++ + ++EKM D + D ++Y ++I L D+A
Sbjct: 218 GCSPDKVSYYTVMGFLCKNRRIREVMDVIEKMEDTKLLADQVTYNTLIHMLCKHQHADEA 277
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
L+E ++ G D Y+A + +YC R+ A +++EM +G P+ TY
Sbjct: 278 LQFLREAQKRGFQVDKVGYSAIVDSYCKEGRMDQAKEIVNEMFTRGCIPDVVTYTAIING 337
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLC----------------------- 160
F + ++ + + +M GC PNT S FL LC
Sbjct: 338 FSQAGEVGQARKMLQQMYKHGCKPNTVSYTAFLKGLCQKGNSSEAREMMKASEEQWWTPN 397
Query: 161 -----------KRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFL 209
+R+ K+ A + +M+ KGF + ++L LC +G++ EA+K
Sbjct: 398 AITYSVVMHGFRREGKLSDACDVVREMIGKGFFPTPVEINLLLQSLCRIGRVDEAKKFME 457
Query: 210 EMIEKGHKPSQVSFRRI 226
E + G + V+F +
Sbjct: 458 ECLNMGCAVNAVNFTTV 474
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 103/223 (46%), Gaps = 2/223 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G++ + C++ Y + ++ A +++ M+ I P+++ + I L + +KA
Sbjct: 113 GIQRTPQDFCCVMVSYSRAGKLRNAMQVLTMMQKAGIEPNLLVCNTAIHVLVMANMLEKA 172
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
L+ M+ G P+ YN I+ YC R+ DA L+ EM KG SP+ +Y
Sbjct: 173 LRFLERMQLLGIMPNVVTYNCLIKGYCDLHRVEDAMELISEMPLKGCSPDKVSYYTVMGF 232
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGS 183
+ +R ++ +M T L + + L+ LCK Q E ALQ + ++GF
Sbjct: 233 LCKNRRIREVMDVIEKMEDTKLLADQVTYNTLIHMLCKHQHADE-ALQFLREAQKRGFQV 291
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + D C G++ +A++ EM +G P V++ I
Sbjct: 292 DKVGYSAIVDSYCKEGRMDQAKEIVNEMFTRGCIPDVVTYTAI 334
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 98/217 (45%), Gaps = 2/217 (0%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
MG + V++ +I +C+ +E A +++ M + PD ++YT+II LG G+ ++
Sbjct: 462 MGCAVNAVNFTTVIHRFCQQDDIEAALSLLDDMYLSNKHPDAVTYTTIIDALGKKGRIEE 521
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
A ++ +M + G P Y I Y R+ D L+D+M+ + T +N
Sbjct: 522 ATELTLKMLKKGIDPTPVTYRTVIHRYGQIGRVEDLLNLLDKMLTR--QECRTAFNQVIE 579
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
+L ++ L +++ T + +C L++ R+ A ++ M +
Sbjct: 580 KLCTFGNLEAADKLLGKVLRTASRIDANTCHVLMESYLRKGIPLSAYKVACRMFSRSLIP 639
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQ 220
+ + + + L GK EA+ FL +E+G+ S
Sbjct: 640 DLKLCEKVCKKLMQEGKSEEADNLFLRFVERGNISSH 676
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 107/266 (40%), Gaps = 12/266 (4%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
R+ + D + Y ++DV K + + A +++ M I + ++ G+
Sbjct: 75 RQWRYRHDPIVYCVMLDVLSKTKLCQGARRVLRLMVRRGIQRTPQDFCCVMVSYSRAGKL 134
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
A VL M++ G P+ N AI +A L A ++ M G+ PN TYN
Sbjct: 135 RNAMQVLTMMQKAGIEPNLLVCNTAIHVLVMANMLEKALRFLERMQLLGIMPNVVTYNCL 194
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKG 180
+ + + + + L M GC P+ S ++ LCK + E+ D++EK
Sbjct: 195 IKGYCDLHRVEDAMELISEMPLKGCSPDKVSYYTVMGFLCKNRRIREVM-----DVIEKM 249
Query: 181 FGSYILVSDV----LFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQ 236
+ +L V L +LC EA + E ++G + +V + I +
Sbjct: 250 EDTKLLADQVTYNTLIHMLCKHQHADEALQFLREAQKRGFQVDKVGYSAIVDSYCKEGRM 309
Query: 237 EALQNLSNKMALFGPSMIPKREEYLA 262
+ + + N+M F IP Y A
Sbjct: 310 DQAKEIVNEM--FTRGCIPDVVTYTA 333
>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 117/240 (48%), Gaps = 1/240 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G++P ++++N +I++ CK +V++A I+ + D P+ +YTS+I G
Sbjct: 193 MLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHN 252
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A + M + GC P++ Y+ I C RL +A +++EMV+KG+ P TY +
Sbjct: 253 LDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTI 312
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + L +M GC+PN Q+ L+ R K EIA+ L++ M+ G
Sbjct: 313 PLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADG 372
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
+ + L + LC G+ A F M+ G PS ++ IK + + Q+A+
Sbjct: 373 LVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAM 432
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 104/206 (50%), Gaps = 2/206 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G P++++YN LI YCK + A +++E M+ + PD +YT +I G G+
Sbjct: 438 MLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGK 497
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A + M E+G P+ Y A I Y ++ DA L +MVE G P++ TYN+
Sbjct: 498 LEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNV 557
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEK 179
F +N + + N +M+ G LPN + F+ LC R + +A +++++M ++
Sbjct: 558 MISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLC-RNGRTGLAFKIFHEMEKR 616
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAE 205
+ + L LC G+ +AE
Sbjct: 617 NYFPNLYTYSSLIYGLCQEGRAEDAE 642
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 120/256 (46%), Gaps = 2/256 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G P+I ++ LI +D + E A + KM + + P ++Y ++I L + G+
Sbjct: 333 MKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGR 392
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A + K M +G P YN I+ +C+ ++ A + D+M++ G SPN TYN
Sbjct: 393 FETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNT 452
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ +L ++ L M G G P+ + L+ R K+E A L+ M+E G
Sbjct: 453 LIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHG 512
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ + D ++ K+ +A F +M+E G+ PS ++ + + N +
Sbjct: 513 ISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAE 572
Query: 241 NLSNKMALFG--PSMI 254
N KM G P++I
Sbjct: 573 NFCGKMVKQGLLPNVI 588
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 118/252 (46%), Gaps = 2/252 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P +YN +I +C ++KA I +KM SP+VI+Y ++I G G
Sbjct: 403 MLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGN 462
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A +L+ MK G PDA Y I + +L A+ L M+E G+SPN TY
Sbjct: 463 LNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTA 522
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++ + + L+ +M+ +G LP++Q+ ++ + + A MV++G
Sbjct: 523 IIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQG 582
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEA- 238
++ D LC G+ A K F EM ++ + P+ ++ I L + ++A
Sbjct: 583 LLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAE 642
Query: 239 LQNLSNKMALFG 250
+ NL ++ +G
Sbjct: 643 MYNLLARLTHYG 654
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 116/258 (44%), Gaps = 2/258 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G P+ V+Y+ LI+ C + ++E+A ++E+M + I P V +YT + L G +A
Sbjct: 267 GCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEA 326
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++L +MK+ GC P+ + A I + A GL +M+ GL P TYN
Sbjct: 327 VELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQ 386
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+++ ++ M+ G LP+TQ+ ++K ++ A+ +++ M++ G
Sbjct: 387 LCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPN 446
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSN 244
++ + L C G L A + M G KP ++ + + K E +L
Sbjct: 447 VITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFY 506
Query: 245 KMALFGPSMIPKREEYLA 262
M G S P Y A
Sbjct: 507 GMMEHGIS--PNHVTYTA 522
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 104/219 (47%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P+ +Y LI +C++ ++ A+ + ++M + P+ ++Y+++I GL G+ ++A D+
Sbjct: 235 PNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDM 294
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L+EM + G P Y + + C A +A L+ +M ++G PN T+
Sbjct: 295 LEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSR 354
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ LY +M+ G +P T + L+ + + E A ++ M+ G
Sbjct: 355 DGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQT 414
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + C MG + +A F +M++ G P+ +++ +
Sbjct: 415 YNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTL 453
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 103/240 (42%), Gaps = 1/240 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G++P + +Y + C +A +++ KM+ P++ ++T++I GL G+
Sbjct: 298 MVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGK 357
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A + +M G P YNA I C+ R A + M+ G P+ TYN
Sbjct: 358 FEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNE 417
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ F D++ + ++ +M+ G PN + L+ +Q + A++L M G
Sbjct: 418 IIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNG 477
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
L GKL A F M+E G P+ V++ I LA +AL
Sbjct: 478 LKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDAL 537
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 99/203 (48%), Gaps = 4/203 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ P++++Y ID C++ + A+KI +M + P++ +Y+S+I GL G+
Sbjct: 578 MVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGR 637
Query: 61 PDKAR--DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
+ A ++L + YGC P+ Y ++ C R +A L+ M +KGL P+ Y
Sbjct: 638 AEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIY 697
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGC-LPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
+ + S+ N++ M G L + + LCK + +E A ++ M+
Sbjct: 698 RALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCK-ENFIEEAQCIFQTML 756
Query: 178 EKGFGSYILVSDVLFDLLCDMGK 200
EK + S +V VL D L G+
Sbjct: 757 EKHWNSDEVVWTVLLDGLLKEGE 779
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 112/293 (38%), Gaps = 72/293 (24%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G+KPD +Y LI + + ++E A + M + ISP+ ++YT+II G + +
Sbjct: 473 MKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAK 532
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A + +M E G P + YN I + + +A +MV++GL PN TY
Sbjct: 533 VDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTS 592
Query: 121 F-------------FRVF-------YWSNDLRSS-----------------WNLYCRMMG 143
F F++F Y+ N S +NL R+
Sbjct: 593 FIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTH 652
Query: 144 TGCLPNTQSCMFLVK-LCK----------------------------------RQEKVEI 168
GC PN + LVK LC + KVE
Sbjct: 653 YGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVES 712
Query: 169 ALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQV 221
AL ++ M GF ++ L LC + EA+ F M+EK +V
Sbjct: 713 ALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEV 765
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 113/244 (46%), Gaps = 4/244 (1%)
Query: 21 CKDR-QVEKAYKIVEKMRDE-DISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYP 78
C++ +V++ + + ++ + D + S+T+++ LG D ARD+ +M G P
Sbjct: 141 CRNEGEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRP 200
Query: 79 DAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLY 138
+N I C R+++A +M + PNA TY +++L ++ ++
Sbjct: 201 SLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMF 260
Query: 139 CRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDM 198
RM+ GC PN+ + L+ + ++E A+ + +MV+KG + + LCD
Sbjct: 261 DRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDA 320
Query: 199 GKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFGPSMIPKRE 258
G EA + +M ++G P+ +F + + + K E L +KM G ++P
Sbjct: 321 GCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADG--LVPTTV 378
Query: 259 EYLA 262
Y A
Sbjct: 379 TYNA 382
>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 113/223 (50%), Gaps = 5/223 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G+ P++ +YN L+ CK+ +V+ A+K+ +M ++ PD ++YT+++ L G+
Sbjct: 170 MKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGK 229
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D AR++ K P YNA I C R+ A L+ EM++ G+ PN +Y+
Sbjct: 230 IDDARELAGRFK-----PSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSC 284
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
S ++ ++ L+ +M GC N + L+K C + K+ AL LW M++ G
Sbjct: 285 IINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDG 344
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + L LC G L EA + +M G P+ ++
Sbjct: 345 CEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTY 387
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 114/242 (47%), Gaps = 5/242 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV P++VSY+C+I+ C VE A+ + +M ++ ++T +I G + G+
Sbjct: 270 MMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGK 329
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A D+ K M + GC P+ AYN I C L +A + D+M G PN TTY++
Sbjct: 330 LYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSI 389
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPN--TQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
F S DL + + RM+ GC PN T +CM V LCK + A L M
Sbjct: 390 LIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDV-LCK-NSMFDQANSLVEKMTL 447
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQE 237
+G + + LC G++ A K M G P+ ++ + AL + +E
Sbjct: 448 EGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEE 507
Query: 238 AL 239
A
Sbjct: 508 AF 509
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 106/226 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G +P++V+YN LI C + +E+A ++ ++M+ P+V +Y+ +I G G
Sbjct: 340 MIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGD 399
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A + M +GC P+ Y + C A+ L+++M +G +PN T+N
Sbjct: 400 LVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNT 459
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + + + + L RM G GCLPN + L+ R K E A L+ ++ +
Sbjct: 460 FIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARN 519
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ + + G + EA + F + + +G P +++ +
Sbjct: 520 LQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTM 565
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 104/224 (46%), Gaps = 1/224 (0%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
KP + YN LID CK+ ++E A K++ +M D + P+V+SY+ II L + G + A
Sbjct: 241 KPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFA 300
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
+ +M GC + + I+ + +L +A L M++ G PN YN
Sbjct: 301 LFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLC 360
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+ L + + +M +GCLPN + L+ + + A + WN M+ G ++
Sbjct: 361 SNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVV 420
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKAL 229
+ D+LC +A +M +G P+ ++F IK L
Sbjct: 421 TYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGL 464
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 91/172 (52%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G +P++V+Y C++DV CK+ ++A +VEKM E +P+ +++ + I GL G+
Sbjct: 410 MISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGR 469
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A +L+ M+ +GC P+ YN + + +A GL E+ + L PN TYN
Sbjct: 470 VEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNT 529
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQL 172
F + + + L+ + + G P++ + ++ +Q KV+IA QL
Sbjct: 530 VLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQL 581
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 99/215 (46%), Gaps = 5/215 (2%)
Query: 12 SYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEM 71
+Y +I+ ++ +++ I+++M+ + I+ + II G VG ++A + +
Sbjct: 76 TYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRI 135
Query: 72 KEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDL 131
E+GC P YN + + + + L M + GL PN TYN+ + ++ +
Sbjct: 136 GEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRV 195
Query: 132 RSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVL 191
++ L+ M GC P+ + +V + K++ A +L F + V + L
Sbjct: 196 DAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAREL-----AGRFKPSVPVYNAL 250
Query: 192 FDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
D +C G++ A K EM++ G P+ VS+ I
Sbjct: 251 IDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCI 285
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 86/182 (47%), Gaps = 3/182 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G P+I +YN L+D + + E+A+ + +++ ++ P++++Y +++ G G
Sbjct: 480 MQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGM 539
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVE-KGLSPNATTY- 118
+A + + G PD+ YN I YC +++ A+ L++ + K P+ TY
Sbjct: 540 MGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYT 599
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
+L + W N + + + + G PN + LV+ + + +D++
Sbjct: 600 SLIWGACNWMN-IEEAMAFLDKAINQGICPNFATWNALVRCFFDSLGHMGPIHILDDILR 658
Query: 179 KG 180
KG
Sbjct: 659 KG 660
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 54/117 (46%), Gaps = 3/117 (2%)
Query: 137 LYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLC 196
++ R+ GC P + L+ + K ++ L+ +M + G + ++L LC
Sbjct: 131 MFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALC 190
Query: 197 DMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFGPSM 253
++ A K F+EM KG P V++ + + + A K + + L+ + F PS+
Sbjct: 191 KNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGR---FKPSV 244
>gi|307135890|gb|ADN33755.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
melo]
Length = 566
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 124/255 (48%), Gaps = 4/255 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G KPD+ L+ CK ++ KA K++E M I PD SYT ++ L G
Sbjct: 88 MVEKGQKPDVFQATQLLYDLCKACKMRKAIKVMEMMIGSGIIPDASSYTFLVSSLCRKGN 147
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A ++ +M+EYG + YN+ +R C+ L + L+D +++KGL PNA TY+
Sbjct: 148 VGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSF 207
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEK 179
Y + L ++ G PN S + L LCK + + E A++L+ ++ K
Sbjct: 208 LLEAAYKERGADEASKLLDEIIAKGGEPNLVSYNVLLTGLCK-EGRTEDAIRLFRELPSK 266
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQE-A 238
GF ++ ++L LC+ G+ EA EM PS V++ + + L + E A
Sbjct: 267 GFSPNVVSYNILLRSLCNEGRWEEANVLLAEMNGDERSPSTVTYNILIGSLALHGRTEHA 326
Query: 239 LQNLSNKM-ALFGPS 252
L+ L + A F P+
Sbjct: 327 LEVLEEMIRARFKPT 341
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 109/248 (43%), Gaps = 3/248 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G + V+YN L+ C + ++ ++++++ + + P+ +Y+ ++
Sbjct: 158 MEEYGYPTNTVTYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERG 217
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A +L E+ G P+ +YN + C R DA L E+ KG SPN +YN+
Sbjct: 218 ADEASKLLDEIIAKGGEPNLVSYNVLLTGLCKEGRTEDAIRLFRELPSKGFSPNVVSYNI 277
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
R + L M G P+T + L+ + E AL++ +M+
Sbjct: 278 LLRSLCNEGRWEEANVLLAEMNGDERSPSTVTYNILIGSLALHGRTEHALEVLEEMIRAR 337
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEA-- 238
F + + LC GKL K +M+ + P++ ++ I L E QEA
Sbjct: 338 FKPTASSYNPIIAHLCKDGKLDLVVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFS 397
Query: 239 -LQNLSNK 245
+Q+L NK
Sbjct: 398 IIQSLGNK 405
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 99/202 (49%)
Query: 22 KDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAA 81
K+ ++ A+ +E M ++ PDV T ++ L + KA V++ M G PDA+
Sbjct: 74 KELRLTDAFFHLEFMVEKGQKPDVFQATQLLYDLCKACKMRKAIKVMEMMIGSGIIPDAS 133
Query: 82 AYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRM 141
+Y + + C + A L+D+M E G N TYN R +L S L R+
Sbjct: 134 SYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGNLTQSLQLLDRL 193
Query: 142 MGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKL 201
+ G +PN + FL++ ++ + A +L ++++ KG ++ +VL LC G+
Sbjct: 194 IQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGEPNLVSYNVLLTGLCKEGRT 253
Query: 202 VEAEKSFLEMIEKGHKPSQVSF 223
+A + F E+ KG P+ VS+
Sbjct: 254 EDAIRLFRELPSKGFSPNVVSY 275
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 110/224 (49%), Gaps = 6/224 (2%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G P++VSYN L+ C + + E+A ++ +M ++ SP ++Y +IG L L G+ + A
Sbjct: 267 GFSPNVVSYNILLRSLCNEGRWEEANVLLAEMNGDERSPSTVTYNILIGSLALHGRTEHA 326
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+VL+EM P A++YN I + C +L +D+M+ + +PN TYN
Sbjct: 327 LEVLEEMIRARFKPTASSYNPIIAHLCKDGKLDLVVKCLDQMMYRHCNPNEGTYNA-IAT 385
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSC--MFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
++ ++++ + +G +TQ + + LC R+ A QL +M + GF
Sbjct: 386 LCEEGMVQEAFSI-IQSLGNKQHSSTQEFYKIVITSLC-RKGNTYPAFQLLYEMTKYGFT 443
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
L LC G L EA + F ++E+ +KP ++ +
Sbjct: 444 PDSFTYSSLIRGLCMEGMLNEAIEIF-SVMEENNKPDTENYNSL 486
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 101/224 (45%), Gaps = 5/224 (2%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G +P++VSYN L+ CK+ + E A ++ ++ + SP+V+SY ++ L G+ ++A
Sbjct: 232 GGEPNLVSYNVLLTGLCKEGRTEDAIRLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEA 291
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+L EM P YN I + + R A +++EM+ P A++YN +
Sbjct: 292 NVLLAEMNGDERSPSTVTYNILIGSLALHGRTEHALEVLEEMIRARFKPTASSYNPI--I 349
Query: 125 FYWSNDLRSSWNLYC--RMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
+ D + + C +MM C PN + + LC+ + V+ A + + K
Sbjct: 350 AHLCKDGKLDLVVKCLDQMMYRHCNPNEGTYNAIATLCE-EGMVQEAFSIIQSLGNKQHS 408
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
S ++ LC G A + EM + G P ++ +
Sbjct: 409 STQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSL 452
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 1/109 (0%)
Query: 13 YNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMK 72
Y +I C+ A++++ +M +PD +Y+S+I GL + G ++A ++ M+
Sbjct: 414 YKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVME 473
Query: 73 EYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
E PD YN+ I C ++R A + + MV KG PN TTY +
Sbjct: 474 ENN-KPDTENYNSLILGCCKSRRTDLALDVFEIMVGKGYLPNETTYTIL 521
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 1/106 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G PD +Y+ LI C + + +A +I M +E+ PD +Y S+I G +
Sbjct: 437 MTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVM-EENNKPDTENYNSLILGCCKSRR 495
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEM 106
D A DV + M G P+ Y + K + A+ ++ E+
Sbjct: 496 TDLALDVFEIMVGKGYLPNETTYTILVEGIIHEKEMDLATKVLREL 541
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
KPD +YN LI CK R+ + A + E M + P+ +YT ++ G+ + D A
Sbjct: 477 KPDTENYNSLILGCCKSRRTDLALDVFEIMVGKGYLPNETTYTILVEGIIHEKEMDLATK 536
Query: 67 VLKEMK 72
VL+E++
Sbjct: 537 VLRELQ 542
>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
Length = 813
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 114/224 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ PD+ +YNC+++ CK R ++KA I+ +M D+ + PD +Y S+I G GQ
Sbjct: 242 MVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQ 301
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A V K+M G PD N+ + + C +++DA + D M KG + +Y +
Sbjct: 302 WKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKI 361
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L L+ M+ G P++ L+K + ++ A ++N+M E+G
Sbjct: 362 MLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQG 421
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
++ + LC +GK+ +A + F +MI++G PS ++
Sbjct: 422 VEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYH 465
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 105/215 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MRE GV+PD+V+Y+ +I C+ +++ A + +M D+ ++P + +Y +I G G
Sbjct: 417 MREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGD 476
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA+D++ +M G PD +N I N C R+ DA + D + GL PN YN
Sbjct: 477 LLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNT 536
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + ++ ++ M+ G PN LV + +++ L L+ +++ KG
Sbjct: 537 LMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKG 596
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
+ +++ L G+ V A+ F EM E G
Sbjct: 597 IKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESG 631
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 106/220 (48%), Gaps = 2/220 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G K DI SY +++ Y + ++ M + I+PD + +I G D+A
Sbjct: 351 GQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRA 410
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ EM+E G PD Y+ I C ++ DA ++M+++G++P+ +TY+ +
Sbjct: 411 TIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQG 470
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEKGFGS 183
F DL + +L +MM G P+ F++ LCK +V A +++ + G
Sbjct: 471 FCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLG-RVMDAQNIFDFTISIGLHP 529
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++V + L D C +GK+ A + F M+ G +P+ V +
Sbjct: 530 NVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVY 569
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 107/226 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV PD +YN LI Y Q ++A ++ +KM + I PDV++ S++ L G+
Sbjct: 277 MVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGK 336
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
ARDV M G D +Y + Y L D + L + M+ G++P++ +N+
Sbjct: 337 IKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNV 396
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + L + ++ M G P+ + ++ R K++ A++ +N M+++G
Sbjct: 397 LIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQG 456
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
I L C G L++A+ L+M+ KG +P F I
Sbjct: 457 VAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFI 502
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 107/226 (47%), Gaps = 4/226 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDIS--PDVISYTSIIGGLGLV 58
M +G PD+ SY ++ C DR+ +A +++ M + P+ ++Y ++I G
Sbjct: 170 MPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVIDGFFKE 229
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
G +KA D+ EM + G PD + YN + C A+ + A ++ +MV+KG+ P+ TY
Sbjct: 230 GDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTY 289
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSC-MFLVKLCKRQEKVEIALQLWNDMV 177
N + + + + + +M G LP+ + + LCK K++ A +++ M
Sbjct: 290 NSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCK-HGKIKDARDVFDSMA 348
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
KG + I ++ + G LV+ + F M+ G P F
Sbjct: 349 MKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIF 394
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 103/227 (45%), Gaps = 2/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ PD+V+ N L+ CK +++ A + + M + D+ SY ++ G G
Sbjct: 312 MTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGC 371
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++ M G PD+ +N I+ Y L A+ + +EM E+G+ P+ TY+
Sbjct: 372 LVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYST 431
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+ + + +M+ G P+ + FL++ C + ++ A L M+ K
Sbjct: 432 VIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLK-AKDLVLQMMNK 490
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G I + + + LC +G++++A+ F I G P+ + + +
Sbjct: 491 GMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTL 537
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 105/225 (46%), Gaps = 3/225 (1%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIV-EKMRDEDISPDVISYTSIIGGLGLVGQP 61
+ G+ D + + L+ C+ ++ +A I+ +M PDV SY ++ L +
Sbjct: 136 KTGLGIDTIMISNLLRGLCEAKRTAEALDILLHRMPHLGCVPDVFSYCIVLKSLCSDRKS 195
Query: 62 DKARDVLKEMKEYG--CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+A ++L+ M E G C P+A AYN I + + A L +EMV++G+SP+ +TYN
Sbjct: 196 GQADELLRMMAEGGAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYN 255
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ + + + +M+ G LP+ + L+ + + A+++ M +
Sbjct: 256 CVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQ 315
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
G ++ + L LC GK+ +A F M KG K S++
Sbjct: 316 GILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYK 360
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 103/231 (44%), Gaps = 2/231 (0%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
+G+ P+++ YN L+D YC ++E A ++ + M I P+V+ Y +++ G VG+ D
Sbjct: 524 SIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRID 583
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
+ + +E+ G P YN + A R A EM E G++ + TY++
Sbjct: 584 EGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVL 643
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
+ ++ + L+ + + + ++ + +VE A L+ + G
Sbjct: 644 GGLFKNSCSDEAILLFKELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSGLV 703
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG-HKP-SQVSFRRIKALME 231
++ ++ L G + EA+ F M G +P SQ+ ++ L+E
Sbjct: 704 PSVVTYSIMMTNLIKEGLVEEADDMFSSMENAGCEQPNSQLLNHVVRELLE 754
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 93/239 (38%), Gaps = 36/239 (15%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G++P++V Y L++ YCK ++++ + ++ + I P Y I+ GL G+
Sbjct: 557 MVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGR 616
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAI----RNYC------------------------- 91
A+ EM E G D Y+ + +N C
Sbjct: 617 TVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNI 676
Query: 92 -IA-----KRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
IA +R+ +A L + GL P+ TY++ + + +++ M G
Sbjct: 677 MIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKEGLVEEADDMFSSMENAG 736
Query: 146 C-LPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVE 203
C PN+Q +V+ + ++ A + + E+ F + +L DL G E
Sbjct: 737 CEQPNSQLLNHVVRELLEKREIVRAGTYLSKIDERSFSLDHSTTTLLIDLFSSKGTCRE 795
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/225 (20%), Positives = 91/225 (40%), Gaps = 40/225 (17%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ P + +Y L+D + + + ++ + D I ++++ GL + +A
Sbjct: 104 LSPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMISNLLRGLCEAKRTAEAL 163
Query: 66 DVL-KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
D+L M GC PD +Y +++ C ++ SG DE++
Sbjct: 164 DILLHRMPHLGCVPDVFSYCIVLKSLCSDRK----SGQADELL----------------- 202
Query: 125 FYWSNDLRSSWNLYCRMMGTG---CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
RMM G CLPN + ++ ++ V A L+N+MV++G
Sbjct: 203 ---------------RMMAEGGAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGI 247
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + + + LC + +AE +M++KG P ++ +
Sbjct: 248 SPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSL 292
>gi|356525427|ref|XP_003531326.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Glycine max]
Length = 521
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 111/230 (48%), Gaps = 8/230 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD+V+YN L++ C++ V++A ++VE M + PD+ SY ++ G
Sbjct: 250 MSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKGFCKANM 309
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A ++ E + D +YN I +C A+R R L +EM KG+ P+ T+N+
Sbjct: 310 VDRAHLMMVERMQTKGMCDVVSYNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNI 369
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV----KLCKRQEKVEIALQLWNDM 176
F L M LP+ C+F LCK KV++A ++ DM
Sbjct: 370 LIDAFLREGSTHVVKKLLDEMTKMRVLPD---CIFYTAVVDHLCK-NGKVDVAHSVFRDM 425
Query: 177 VEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
VE G ++ + L + C ++++A F EM KG P +V+++ I
Sbjct: 426 VENGVNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYPDEVTYKLI 475
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 91/173 (52%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
D+VSYN +I +CK R+ K Y++ E+M + I PD++++ +I G + +L
Sbjct: 328 DVVSYNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLL 387
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
EM + PD Y A + + C ++ A + +MVE G++P+ +YN F +
Sbjct: 388 DEMTKMRVLPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKT 447
Query: 129 NDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
+ + + +L+ M G P+ + +V R +K+ +A ++W+ M+E+GF
Sbjct: 448 SRVMDAMHLFDEMQSKGLYPDEVTYKLIVGGLIRGKKISLACRVWDQMMERGF 500
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 111/294 (37%), Gaps = 72/294 (24%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDV--------------- 45
M G PD+VSY +ID C ++ ++A K+ ++ D+ +SPD
Sbjct: 145 MPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLIDKGLSPDYKACVALVVGLCSGGR 204
Query: 46 --------------------ISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNA 85
+ Y ++I G +G+ DKA + M GC PD YN
Sbjct: 205 VDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNI 264
Query: 86 AIRNYCIAKRLRD-ASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDL------------- 131
+ NYC + + D A L++ M G+ P+ +YN + F +N +
Sbjct: 265 LL-NYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKGFCKANMVDRAHLMMVERMQT 323
Query: 132 ----------------------RSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIA 169
R + L+ M G G P+ + L+ R+ +
Sbjct: 324 KGMCDVVSYNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVV 383
Query: 170 LQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+L ++M + + + D LC GK+ A F +M+E G P +S+
Sbjct: 384 KKLLDEMTKMRVLPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVENGVNPDVISY 437
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 98/214 (45%), Gaps = 3/214 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G PDI ++N +++ C+ ++E A ++ M + PDV+SYT II L +
Sbjct: 110 MDSLGFVPDIWAFNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKR 169
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A V + + + G PD A A + C R+ A L+ +++ G+ N+ YN
Sbjct: 170 FDEAAKVWRRLIDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNA 229
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + + + M TGC+P+ + L+ C + V+ A++L M G
Sbjct: 230 LIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSG 289
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEK 214
+ + L C K +++ L M+E+
Sbjct: 290 VEPDLYSYNELLKGFC---KANMVDRAHLMMVER 320
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 60/114 (52%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +M V PD + Y ++D CK+ +V+ A+ + M + ++PDVISY +++ G +
Sbjct: 390 MTKMRVLPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSR 449
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPN 114
A + EM+ G YPD Y + K++ A + D+M+E+G + N
Sbjct: 450 VMDAMHLFDEMQSKGLYPDEVTYKLIVGGLIRGKKISLACRVWDQMMERGFTLN 503
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 91/221 (41%), Gaps = 12/221 (5%)
Query: 11 VSYNCLIDVYCKDRQVEKAYKIVEKM---RDEDISPDVISYTSIIGGLGLVGQPDKA--- 64
V YN I V + ++ A+ + R + P +Y+ I L P+
Sbjct: 46 VDYNRFIGVLLRHSRLHLAHHYYRRHVIPRGFSLLP--FTYSRFISAL--CSAPNNINLP 101
Query: 65 --RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
+L +M G PD A+N + C RL A L M KG P+ +Y +
Sbjct: 102 LIHSLLLDMDSLGFVPDIWAFNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIII 161
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
+ + ++ R++ G P+ ++C+ LV +V++A +L +++ G
Sbjct: 162 DALCNAKRFDEAAKVWRRLIDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVK 221
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
LV + L D C MG++ +A K M G P V++
Sbjct: 222 VNSLVYNALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTY 262
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 79/187 (42%), Gaps = 4/187 (2%)
Query: 36 MRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKR 95
M I ++Y S I L G ++A + +M E C + YN I R
Sbjct: 1 MYQSSIGAHRLAYRSQISKLVKAGLINQAIYLFDQMTESNCRVFSVDYNRFIGVLLRHSR 60
Query: 96 LRDASGLMD-EMVEKGLSPNATTYNLFFRVFYWSND---LRSSWNLYCRMMGTGCLPNTQ 151
L A ++ +G S TY+ F + + L +L M G +P+
Sbjct: 61 LHLAHHYYRRHVIPRGFSLLPFTYSRFISALCSAPNNINLPLIHSLLLDMDSLGFVPDIW 120
Query: 152 SCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEM 211
+ + L RQ ++E AL+L++ M KG ++ ++ D LC+ + EA K + +
Sbjct: 121 AFNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRL 180
Query: 212 IEKGHKP 218
I+KG P
Sbjct: 181 IDKGLSP 187
>gi|297844198|ref|XP_002889980.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335822|gb|EFH66239.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 517
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 102/190 (53%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
D+VSY+ LI+ +C+ +KAYK+ E+MR + I +V+++TS+I G A+ +L
Sbjct: 324 DVVSYSTLIETFCRASNTKKAYKLFEEMRQKGIVTNVVTFTSLIKAFLREGNSSVAKKLL 383
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
+M E G PD Y + + C + + A G+ ++M+E ++P+A +YN S
Sbjct: 384 DQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGIFNDMIEHEITPDAISYNSLISGLCRS 443
Query: 129 NDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVS 188
+ + L+ M G C P+ + F++ R++K+ A ++W+ M++KGF VS
Sbjct: 444 GRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIREKKLSAAYKVWDQMMDKGFTLDRDVS 503
Query: 189 DVLFDLLCDM 198
D L C M
Sbjct: 504 DTLIKASCSM 513
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 110/228 (48%), Gaps = 4/228 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++G +PD+V+YN L++ Y + +++A ++ +M I D SY ++ V
Sbjct: 246 MSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMTEMVRSGIQLDAYSYNQLLKRHCRVSH 305
Query: 61 PDKARD-VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
PD+ +LKEM+ G + D +Y+ I +C A + A L +EM +KG+ N T+
Sbjct: 306 PDRCYSFMLKEMEPRG-FCDVVSYSTLIETFCRASNTKKAYKLFEEMRQKGIVTNVVTFT 364
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPN-TQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
+ F + + L +M G P+ L LCK V+ A ++NDM+E
Sbjct: 365 SLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCK-SGNVDKAYGIFNDMIE 423
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + L LC G++ EA K F +M K P +++F+ I
Sbjct: 424 HEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFI 471
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 108/259 (41%), Gaps = 36/259 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIV-EKMRDEDISPDVISYTSIIGGLGLVG 59
M GV PD + L+ C R+V+ AY++V E+++ + ++ Y ++I G G
Sbjct: 175 MIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSIVVYNALISGFCKAG 234
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ +KA + M + GC PD YN + Y L+ A G+M EMV G+ +A +YN
Sbjct: 235 RIEKAEALKSFMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMTEMVRSGIQLDAYSYN 294
Query: 120 LFFR-----------------------------------VFYWSNDLRSSWNLYCRMMGT 144
+ F +++ + ++ L+ M
Sbjct: 295 QLLKRHCRVSHPDRCYSFMLKEMEPRGFCDVVSYSTLIETFCRASNTKKAYKLFEEMRQK 354
Query: 145 GCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEA 204
G + N + L+K R+ +A +L + M E G + + D LC G + +A
Sbjct: 355 GIVTNVVTFTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKA 414
Query: 205 EKSFLEMIEKGHKPSQVSF 223
F +MIE P +S+
Sbjct: 415 YGIFNDMIEHEITPDAISY 433
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 120/298 (40%), Gaps = 42/298 (14%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G PDI ++N +D+ C++ +V A + M PDV+SYT +I GL G+
Sbjct: 105 METLGFIPDIWAFNIYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGK 164
Query: 61 PDKARDVLKEMKEYGCYPDAAA------------------------------------YN 84
A ++ M G PD A YN
Sbjct: 165 VTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSIVVYN 224
Query: 85 AAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGT 144
A I +C A R+ A L M + G P+ TYN+ +Y +N L+ + + M+ +
Sbjct: 225 ALISGFCKAGRIEKAEALKSFMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMTEMVRS 284
Query: 145 GCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVE 203
G + S L+K C+ + +M +GF + S L + C +
Sbjct: 285 GIQLDAYSYNQLLKRHCRVSHPDRCYSFMLKEMEPRGFCDVVSYS-TLIETFCRASNTKK 343
Query: 204 AEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLSNKMALFGPSMIPKREEY 260
A K F EM +KG + V+F IKA + N A + L ++M G S P R Y
Sbjct: 344 AYKLFEEMRQKGIVTNVVTFTSLIKAFLREGNSSVA-KKLLDQMTELGLS--PDRIFY 398
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 62/112 (55%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E+G+ PD + Y ++D CK V+KAY I M + +I+PD ISY S+I GL G+
Sbjct: 386 MTELGLSPDRIFYTTILDHLCKSGNVDKAYGIFNDMIEHEITPDAISYNSLISGLCRSGR 445
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLS 112
+A + ++MK C PD + I K+L A + D+M++KG +
Sbjct: 446 VTEAIKLFEDMKGKECCPDELTFKFIIGGLIREKKLSAAYKVWDQMMDKGFT 497
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 101/226 (44%), Gaps = 5/226 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR + YN I V K+ + E A I M S +Y+ I GL V +
Sbjct: 35 MRHSSYRVFSSDYNRFIGVLVKESRFELAEAIYRDMMPMGFSLIPFTYSRFISGLCKVKK 94
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ +L++M+ G PD A+N + C ++ A MV++G P+ +Y +
Sbjct: 95 FELIDALLRDMETLGFIPDIWAFNIYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTI 154
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + + ++ M+ +G P+ ++C LV KV++A ++ + ++
Sbjct: 155 LINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSA 214
Query: 181 -FGSYILVSDVLFDLLCDMGKLVEAE--KSFLEMIEKGHKPSQVSF 223
I+V + L C G++ +AE KSF+ I G +P V++
Sbjct: 215 RVKLSIVVYNALISGFCKAGRIEKAEALKSFMSKI--GCEPDLVTY 258
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E + PD +SYN LI C+ +V +A K+ E M+ ++ PD +++ IIGGL +
Sbjct: 421 MIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIREKK 480
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYC 91
A V +M + G D + I+ C
Sbjct: 481 LSAAYKVWDQMMDKGFTLDRDVSDTLIKASC 511
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 69/173 (39%)
Query: 46 ISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDE 105
++Y S I L G D A V EM+ ++ YN I R A + +
Sbjct: 10 LAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSSDYNRFIGVLVKESRFELAEAIYRD 69
Query: 106 MVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEK 165
M+ G S TY+ F L M G +P+ + + L R+ K
Sbjct: 70 MMPMGFSLIPFTYSRFISGLCKVKKFELIDALLRDMETLGFIPDIWAFNIYLDLLCRENK 129
Query: 166 VEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
V A+Q + MV++G ++ +L + L GK+ +A + + MI G P
Sbjct: 130 VGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSP 182
>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Brachypodium distachyon]
Length = 787
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 118/261 (45%), Gaps = 35/261 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MRE GVK +V++N +I CKD ++E A + KM D+ ++PDVI+Y ++I G
Sbjct: 371 MREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGN 430
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLM----------------- 103
KA ++ EM G D N + N C KR +A GL+
Sbjct: 431 IAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGT 490
Query: 104 ------------------DEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
DEM+EK L+P+ +TYN + L+ + + +M G
Sbjct: 491 VMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKG 550
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
+P+ + ++ ++ +E A Q N MVE F ++ + L + LC GKL +A
Sbjct: 551 LVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKAL 610
Query: 206 KSFLEMIEKGHKPSQVSFRRI 226
K F +EKG K +++ +
Sbjct: 611 KLFESWVEKGKKVDVITYNTL 631
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 129/285 (45%), Gaps = 35/285 (12%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGL----- 55
M + G+ PD+++YN LI +CK + KAY ++++M + D + +++ L
Sbjct: 406 MADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKR 465
Query: 56 -----GLVGQP-------------------------DKARDVLKEMKEYGCYPDAAAYNA 85
GL+ P + A + EM E P + YN
Sbjct: 466 YEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNT 525
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
I+ RL++A ++E++EKGL P+ TTYN+ + DL +++ + +M+
Sbjct: 526 LIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENS 585
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
P+ +C L+ K++ AL+L+ VEKG ++ + L +C G + A
Sbjct: 586 FKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTAL 645
Query: 206 KSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFG 250
F +M +G +P ++ + + + A + E QN+ +K+A G
Sbjct: 646 HFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAESG 690
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 104/219 (47%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD+V+YN L D K R A +++E+MR++ + ++++ +I GL G+ + A
Sbjct: 343 PDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGC 402
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L +M + G PD YN I +C A + A LMDEMV +GL + T N
Sbjct: 403 LNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCK 462
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ L G +P+ S ++ ++ E AL+LW++M+EK I
Sbjct: 463 EKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSIST 522
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ L L MG+L EA E++EKG P ++ I
Sbjct: 523 YNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNII 561
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 97/215 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+ E G+ PD +YN +I YCK+ +E A++ KM + PDV++ +++ GL L G+
Sbjct: 546 LMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGK 605
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA + + E G D YN I+ C + A +M +GL P+A TYN+
Sbjct: 606 LDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNV 665
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + N+ ++ +G L + S L + + + + VE
Sbjct: 666 VLSALSEAGRTEEAQNMLHKLAESGTLSQSFSSPLLKPSSVDEAESGKDAKTEEETVENP 725
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
S L + LC G+ EA+ EM++KG
Sbjct: 726 QDSASEAYTKLVNGLCTSGQFKEAKAILDEMMQKG 760
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 103/223 (46%), Gaps = 11/223 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G+ PD V+YN L++ +C+ + +A ++ +M+ + ++P +Y +++ +G
Sbjct: 230 MQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVSAYARLGW 289
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKG-LSPNATTYN 119
+A V++ M G PD YN C A ++ +A L DEM G L P+ TYN
Sbjct: 290 IKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYN 349
Query: 120 LF----FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWN 174
F+ S+ LR L M G + ++K LCK E +E AL N
Sbjct: 350 TLADACFKCRCSSDALR----LLEEMREKGVKATLVTHNIVIKGLCKDGE-LEGALGCLN 404
Query: 175 DMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHK 217
M + G ++ + L C G + +A EM+ +G K
Sbjct: 405 KMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLK 447
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 103/230 (44%), Gaps = 3/230 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ GV P +YN L+ Y + +++A K+VE M PD+ +Y + GL G+
Sbjct: 265 MKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGK 324
Query: 61 PDKARDVLKEMKEYGCY-PDAAAYNAAIRNYCIAKRLR-DASGLMDEMVEKGLSPNATTY 118
D+A + EM+ G PD YN + + C R DA L++EM EKG+ T+
Sbjct: 325 VDEAFRLKDEMERLGTLLPDVVTYNT-LADACFKCRCSSDALRLLEEMREKGVKATLVTH 383
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
N+ + +L + +M G P+ + L+ + + A L ++MV
Sbjct: 384 NIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVR 443
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKA 228
+G + + LC + EA+ ++G P +VS+ + A
Sbjct: 444 RGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMA 493
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 99/222 (44%), Gaps = 1/222 (0%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ P+ ++N L+ +C + A + M+ +SPD ++Y +++ G +AR
Sbjct: 200 LHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEAR 259
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+L MK+ G P YN + Y ++ A+ +++ M G P+ TYN+
Sbjct: 260 ALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGL 319
Query: 126 YWSNDLRSSWNLYCRMMGTGC-LPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + ++ L M G LP+ + L C + AL+L +M EKG +
Sbjct: 320 CQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKAT 379
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ +++ LC G+L A +M + G P +++ +
Sbjct: 380 LVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTL 421
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 67/151 (44%), Gaps = 35/151 (23%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E G K D+++YN LI CKD V+ A M + PD +Y ++ L G+ +
Sbjct: 618 EKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTE 677
Query: 63 KARDVLKEMKEYGCYP---------------------------------DAA--AYNAAI 87
+A+++L ++ E G D+A AY +
Sbjct: 678 EAQNMLHKLAESGTLSQSFSSPLLKPSSVDEAESGKDAKTEEETVENPQDSASEAYTKLV 737
Query: 88 RNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
C + + ++A ++DEM++KG+S +++TY
Sbjct: 738 NGLCTSGQFKEAKAILDEMMQKGMSVDSSTY 768
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 79/204 (38%), Gaps = 3/204 (1%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDE-DISPDVISYTSIIGGLGLV--GQ 60
+G P + + Y + R A +++ +R + P + + +++ L
Sbjct: 125 LGNLPSTPLADAALSAYSRLRLPHLAAQLLHSLRRRVRVRPSLQAANAVLSALARSPSTS 184
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
P + D + + +P+ +N + +C L DA + M GLSP+A TYN
Sbjct: 185 PQASLDAFRSIVALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNT 244
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
L + L RM G P + LV R ++ A ++ M G
Sbjct: 245 LLNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANG 304
Query: 181 FGSYILVSDVLFDLLCDMGKLVEA 204
F + +VL LC GK+ EA
Sbjct: 305 FEPDLWTYNVLAAGLCQAGKVDEA 328
>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
Length = 558
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 127/261 (48%), Gaps = 4/261 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E + P++V++N LID + K+ + +A K+ + M I PD+ +Y S+I G + +
Sbjct: 245 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDR 304
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA+ + + M C+PD YN I+ +C +KR+ D + L EM +GL + TY
Sbjct: 305 LDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 364
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + D ++ ++ +M+ G P+ + L+ K+E AL++++ M +
Sbjct: 365 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 424
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
I + + + +C GK+ + F + KG KP+ V++ I L QEA
Sbjct: 425 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAY 484
Query: 240 QNLSNKMALFGPSMIPKREEY 260
L KM GP +P Y
Sbjct: 485 A-LLKKMKEDGP--LPDSGTY 502
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 108/223 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++ D+V +N +ID CK R V+ A + ++M + I P+V++Y+S+I L G+
Sbjct: 175 MEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGR 234
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +L +M E P+ +NA I + + +A L D+M+++ + P+ TYN
Sbjct: 235 WSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNS 294
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + L + ++ M+ C P+ + L+K + ++VE +L+ +M +G
Sbjct: 295 LINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRG 354
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ L L G A+K F +M+ G P +++
Sbjct: 355 LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTY 397
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 105/226 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++G +P IV+ + L++ YC +++ A +V++M + PD I++T++I GL L +
Sbjct: 70 MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 129
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++ M + GC P+ Y + C + A L+++M + + +N
Sbjct: 130 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNT 189
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + NL+ M G PN + L+ + A QL +DM+EK
Sbjct: 190 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 249
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ + L D GK VEAEK +MI++ P ++ +
Sbjct: 250 INPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSL 295
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 74/144 (51%), Gaps = 5/144 (3%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV PDI++Y+ L+D C + ++EKA ++ + M+ +I D+ YT++I G+ G+ D
Sbjct: 389 GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDG 448
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
D+ + G P+ YN I C + L++A L+ +M E G P++ TYN R
Sbjct: 449 WDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRA 508
Query: 125 FYWSNDLRSSWNLY-----CRMMG 143
D +S L CR +G
Sbjct: 509 HLRDGDKAASAELIREMRSCRFVG 532
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 104/227 (45%), Gaps = 5/227 (2%)
Query: 22 KDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK--ARDVLKEMKEYGCYPD 79
KD +++ A + M P + + ++ + + + D + +L +M + G P
Sbjct: 19 KDLKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPS 78
Query: 80 AAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYC 139
++ + YC KR+ DA L+D+MVE G P+ T+ + N + L
Sbjct: 79 IVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVD 138
Query: 140 RMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDM 198
RM+ GC PN + +V LCKR + +++A L N M + +++ + + D LC
Sbjct: 139 RMVQRGCQPNLVTYGVVVNGLCKRGD-IDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKY 197
Query: 199 GKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLSN 244
+ +A F EM KG +P+ V++ I L +A Q LS+
Sbjct: 198 RHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 244
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 100/216 (46%), Gaps = 12/216 (5%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ D V+Y LI D + A K+ ++M + + PD+++Y+ ++ GL G+
Sbjct: 350 MSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK 409
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA +V M++ D Y I C A ++ D L + KG+ PN TYN
Sbjct: 410 LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNT 469
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
L+ ++ L +M G LP++ + L++ R + +L +M
Sbjct: 470 MISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCR 529
Query: 181 F----GSYILVSDVLFDLLCDMGKLVEAEKSFLEMI 212
F + LV+++L D G+L +KSFL+M+
Sbjct: 530 FVGDASTIGLVANMLHD-----GRL---DKSFLDML 557
>gi|32489921|emb|CAE05513.1| OSJNBa0038P21.6 [Oryza sativa Japonica Group]
Length = 648
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 109/224 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E V PD+V+YN LID CK +++ K+ +++E+M D I P+ +Y S+I G G
Sbjct: 90 MIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYSTAGM 149
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++ V KEM G P N+ I C R+++A + D MV KG PN +Y+
Sbjct: 150 WKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIISYST 209
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + +L M+ G +PN + L+ R ++ A+ ++ DM KG
Sbjct: 210 LLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKG 269
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
+ + LC +G+L +A F M++ G PS+ +R
Sbjct: 270 MIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYR 313
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 95/218 (43%), Gaps = 3/218 (1%)
Query: 8 PDIVSYNCLIDVYCKD-RQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
P LIDV + E A + ++ + PDV SY ++I G G+ DKA +
Sbjct: 26 PPSTPTTSLIDVLPAECTGPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYE 85
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
+ +M E PD YN+ I C K + + ++++MV+ G+ PN TYN +
Sbjct: 86 LFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYS 145
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSC-MFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ + S ++ M +G +P +C F+ LC R +++ A +++ MV KG I
Sbjct: 146 TAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALC-RHNRIKEAKDIFDSMVLKGPKPNI 204
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ L G M+ KG P+ F
Sbjct: 205 ISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFF 242
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 106/229 (46%), Gaps = 20/229 (8%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISY-TSIIGGLGLVG 59
M ++GV P Y CLI C ++ KA +++ +M ++DI P + Y +SII L G
Sbjct: 300 MVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEG 359
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ + +D++ M + G P+ +N+ + YC+ + +A L M+ L+ N
Sbjct: 360 RVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEA--LHYLMLWHQLALNRI--- 414
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVE 178
V Y + ++ ++ M+ +G + Q+ + L LC+ E N ++E
Sbjct: 415 ----VTYMARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRNNCTDEA-----NMLLE 465
Query: 179 KGFGSY----ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
K F I+ +++ + +G+ EA++ F + G P+ ++
Sbjct: 466 KLFAMNVKFDIITFNIVISAMLKVGRRQEAKELFAAISTYGLVPTVHTY 514
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 59/125 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G I +Y ++ C++ ++A ++EK+ ++ D+I++ +I + VG+
Sbjct: 432 MIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGR 491
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A+++ + YG P YN I N + +A L + + G +P++ N
Sbjct: 492 RQEAKELFAAISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPDSRLLNH 551
Query: 121 FFRVF 125
R+
Sbjct: 552 IVRML 556
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/195 (20%), Positives = 78/195 (40%), Gaps = 26/195 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYC--------------------------KDRQVEKAYKIVE 34
M + G +P++V++N L++ YC R+ A K+
Sbjct: 371 MVQTGQRPNVVTFNSLMEGYCLVGNMEEALHYLMLWHQLALNRIVTYMARRTTAAKKMFH 430
Query: 35 KMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAK 94
+M + + + +Y ++GGL D+A +L+++ D +N I
Sbjct: 431 EMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVG 490
Query: 95 RLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCM 154
R ++A L + GL P TYNL + NL+ + +G P+++
Sbjct: 491 RRQEAKELFAAISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPDSRLLN 550
Query: 155 FLVKLCKRQEKVEIA 169
+V++ ++ +V A
Sbjct: 551 HIVRMLLKKAEVAKA 565
Score = 41.2 bits (95), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 50/90 (55%)
Query: 137 LYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLC 196
++ R++ TG P+ S L+ ++ +V+ A +L+ M+E+ ++ + L D LC
Sbjct: 51 VFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLC 110
Query: 197 DMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++V++E+ +M++ G +P+ ++ +
Sbjct: 111 KTKEMVKSERVLEQMVDAGIRPNNKTYNSL 140
>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
Length = 2021
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 121/248 (48%), Gaps = 1/248 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV+PD+V+Y L+D +C ++++A K+ + M + +PDVISYT++I G + +
Sbjct: 301 MIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHK 360
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA + +EM PD YN + C RL+DA L EMV +G P+ TY++
Sbjct: 361 IDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSI 420
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L + L + + P+ Q ++ R ++E A L++++ KG
Sbjct: 421 LLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKG 480
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI-KALMELANKQEAL 239
+ +++ LC G L EA K F+EM P ++ I + ++ A+
Sbjct: 481 LHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAI 540
Query: 240 QNLSNKMA 247
Q L +A
Sbjct: 541 QLLEEMLA 548
Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 111/223 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + +PD+V Y +ID CKDRQV +A+ + +M + ISPD+ +YTS++ L + +
Sbjct: 196 MEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCE 255
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+L +M PD ++ + C ++ +A ++D M+++G+ P+ TY
Sbjct: 256 WKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTT 315
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+++ + ++ M+ G P+ S L+ + K++ A+ L+ +M K
Sbjct: 316 LMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKE 375
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + L LC +G+L +A F EM+ +G P V++
Sbjct: 376 WIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTY 418
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 111/221 (50%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
++G +PD ++ LI C + ++ +A + +KM DE P+V++Y ++I GL VG
Sbjct: 128 KLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTS 187
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
A +L+ M++ C PD Y + I + C +++ +A L +MV +G+SP+ TY
Sbjct: 188 AAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLV 247
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
+ + L +M+ + LP+ +V ++ KV A ++ + M+++G
Sbjct: 248 HALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVE 307
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ L D C ++ EA K F M+ KG P +S+
Sbjct: 308 PDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISY 348
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 114/237 (48%), Gaps = 8/237 (3%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ PD+V ++ ++D CK+ +V +A++IV+ M + PDV++YT+++ G L + D+A
Sbjct: 271 ILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAV 330
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
V M G PD +Y I YC ++ A L +EM K P+ TYN
Sbjct: 331 KVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGL 390
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
L+ + L+ M+ G +P+ + + L LCK + +E A+ L +
Sbjct: 391 CHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRH-LEEAMALLKAIEASNLNPD 449
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI------KALMELANK 235
I V +++ D +C G+L A F + KG PS ++ + + L+ ANK
Sbjct: 450 IQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANK 506
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 101/224 (45%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV P++ + N LI+ +C +V A+ ++ K+ PD ++T++I GL + G+
Sbjct: 91 MDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGK 150
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + +M + G P+ Y I C A L+ M + P+ Y
Sbjct: 151 IGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTS 210
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+ ++NL+ +M+G G P+ + LV LC E + L N MV
Sbjct: 211 IIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLL-NQMVNS 269
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+++ + D LC GK+ EA + MI++G +P V++
Sbjct: 270 KILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTY 313
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 80/161 (49%), Gaps = 2/161 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PD+V+Y+ L+D CK+R +E+A +++ + +++PD+ Y II G+ G+ + A
Sbjct: 410 GQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAA 469
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
RD+ + G +P YN I C L +A+ L EM SP+ TYN R
Sbjct: 470 RDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARG 529
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEK 165
F +N+ + L M+ G + SC ++ + ++
Sbjct: 530 FLQNNETLRAIQLLEEMLARGF--SADSCFLMLSVLSEDDR 568
>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 127/261 (48%), Gaps = 4/261 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E + P++V++N LID + K+ + +A K+ + M I PD+ +Y S+I G + +
Sbjct: 246 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDR 305
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA+ + + M C+PD YN I+ +C +KR+ D + L EM +GL + TY
Sbjct: 306 LDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 365
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + D ++ ++ +M+ G P+ + L+ K+E AL++++ M +
Sbjct: 366 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 425
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
I + + + +C GK+ + F + KG KP+ V++ I L QEA
Sbjct: 426 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAY 485
Query: 240 QNLSNKMALFGPSMIPKREEY 260
L KM GP +P Y
Sbjct: 486 A-LLKKMKEDGP--LPDSGTY 503
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 108/223 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++ D+V +N +ID CK R V+ A + ++M + I P+V++Y+S+I L G+
Sbjct: 176 MEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGR 235
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +L +M E P+ +NA I + + +A L D+M+++ + P+ TYN
Sbjct: 236 WSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNS 295
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + L + ++ M+ C P+ + L+K + ++VE +L+ +M +G
Sbjct: 296 LINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRG 355
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ L L G A+K F +M+ G P +++
Sbjct: 356 LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTY 398
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 105/226 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++G +P IV+ + L++ YC +++ A +V++M + PD I++T++I GL L +
Sbjct: 71 MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 130
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++ M + GC P+ Y + C + A L+++M + + +N
Sbjct: 131 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNT 190
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + NL+ M G PN + L+ + A QL +DM+EK
Sbjct: 191 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 250
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ + L D GK VEAEK +MI++ P ++ +
Sbjct: 251 INPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSL 296
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 111/239 (46%), Gaps = 3/239 (1%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P I +N L+ K ++ + + EKM+ IS ++ +Y +I Q A +
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L +M + G P ++ + YC KR+ DA L+D+MVE G P+ T+ +
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYIL 186
N + L RM+ GC PN + +V LCKR + +++A L N M + ++
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD-IDLAFNLLNKMEAAKIEADVV 186
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLSN 244
+ + + D LC + +A F EM KG +P+ V++ I L +A Q LS+
Sbjct: 187 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 245
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 107/227 (47%), Gaps = 2/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ +G+ ++ +YN LI+ +C+ Q+ A ++ KM P +++ +S++ G +
Sbjct: 36 MQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR 95
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A ++ +M E G PD + I + + +A L+D MV++G PN TY +
Sbjct: 96 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 155
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEK 179
D+ ++NL +M + ++ LCK + V+ AL L+ +M K
Sbjct: 156 VVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRH-VDDALNLFKEMETK 214
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G ++ L LC G+ +A + +MIEK P+ V+F +
Sbjct: 215 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNAL 261
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 74/144 (51%), Gaps = 5/144 (3%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV PDI++Y+ L+D C + ++EKA ++ + M+ +I D+ YT++I G+ G+ D
Sbjct: 390 GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDG 449
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
D+ + G P+ YN I C + L++A L+ +M E G P++ TYN R
Sbjct: 450 WDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRA 509
Query: 125 FYWSNDLRSSWNLY-----CRMMG 143
D +S L CR +G
Sbjct: 510 HLRDGDKAASAELIREMRSCRFVG 533
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 100/216 (46%), Gaps = 12/216 (5%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ D V+Y LI D + A K+ ++M + + PD+++Y+ ++ GL G+
Sbjct: 351 MSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK 410
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA +V M++ D Y I C A ++ D L + KG+ PN TYN
Sbjct: 411 LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNT 470
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
L+ ++ L +M G LP++ + L++ R + +L +M
Sbjct: 471 MISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCR 530
Query: 181 F----GSYILVSDVLFDLLCDMGKLVEAEKSFLEMI 212
F + LV+++L D G+L +KSFL+M+
Sbjct: 531 FVGDASTIGLVANMLHD-----GRL---DKSFLDML 558
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 54/117 (46%), Gaps = 2/117 (1%)
Query: 140 RMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMG 199
+M G N + L+ R+ ++ +AL L M++ G+ I+ L + C
Sbjct: 35 KMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGK 94
Query: 200 KLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFG--PSMI 254
++ +A +M+E G++P ++F + + L NK L ++M G P+++
Sbjct: 95 RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLV 151
>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
Length = 530
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 113/224 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + +P++++YN +ID CKDRQV +A+ + +M + ISPD+ +Y S+I L + +
Sbjct: 243 MVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCE 302
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+L EM P+ ++ + C + A ++D M+++G+ P+ TY
Sbjct: 303 WKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTA 362
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+++ + ++ M+ GC+PN +S L+ + ++++ A+ L M +G
Sbjct: 363 LMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQG 422
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
+ + + L LC +G+L A F EM+ G P V++R
Sbjct: 423 LIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYR 466
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 106/211 (50%), Gaps = 2/211 (0%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ P++V ++ ++D CK+ + A+ +V+ M + PDV++YT+++ G L + D+A
Sbjct: 318 IMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAV 377
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
V M GC P+ +YN I YC +R+ A GL+++M +GL + TYN
Sbjct: 378 KVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGL 437
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSY 184
L+ + L+ M+ +G +P+ + L+ LCK E A+ L + +
Sbjct: 438 CHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAE-AMVLLKAIEGSNLDAD 496
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
ILV ++ D +C G+L A F + +G
Sbjct: 497 ILVYNIAIDGMCRAGELEAARDLFSNLSCQG 527
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 110/223 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+ ++G +PD ++N LI C + ++ +A + +K E PDV++Y +++ GL VG
Sbjct: 173 LLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGN 232
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +L+ M + C P+ AYN I + C +++ +A L EM+ KG+SP+ TYN
Sbjct: 233 TSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNS 292
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + L M+ + +PN +V ++ + IA + + M+++G
Sbjct: 293 LIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRG 352
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ L D C ++ EA K F M+ KG P+ S+
Sbjct: 353 VEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSY 395
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 88/183 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV+PD+V+Y L+D +C ++++A K+ + M + P+V SY +I G + +
Sbjct: 348 MIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQR 407
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA +L++M G D YN I C RL+ A L EMV G P+ TY +
Sbjct: 408 MDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRI 467
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++ L + L + G+ + + R ++E A L++++ +G
Sbjct: 468 LLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSCQG 527
Query: 181 FGS 183
F +
Sbjct: 528 FAA 530
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 94/227 (41%), Gaps = 2/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M M P V + L+ K + + +M I PDV + +I + +
Sbjct: 103 MLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRR 162
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A VL ++ + GC PD +N IR C+ ++ +A L D+ + +G P+ TY
Sbjct: 163 LGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGT 222
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEK 179
+ ++ L M+ C PN + ++ LCK ++ E A L+++M+ K
Sbjct: 223 LMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTE-AFNLFSEMITK 281
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G I + L LC++ + EM+ P+ V F +
Sbjct: 282 GISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTV 328
>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
Length = 794
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 128/281 (45%), Gaps = 35/281 (12%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKM-----------------------R 37
M E G+ PD+++YN LID YCK R V KA+ ++++M R
Sbjct: 412 MTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKR 471
Query: 38 DEDIS------------PDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNA 85
E+ PD +SY +++ +P+ A + EM + P YN
Sbjct: 472 YEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNT 531
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
I+ C +L +A ++E+++KGL P+ TTYN+ + DL ++ + +M+
Sbjct: 532 LIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENY 591
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
P+ +C L+ K+E A++L+ EKG ++ + L LC G + A
Sbjct: 592 FKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTAL 651
Query: 206 KSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKM 246
F +M +G +P ++ + + + A + E QN+ +K+
Sbjct: 652 HFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKL 692
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 107/221 (48%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
V PD+V+YN L+D K ++ A ++E+MRD+ + ++++ ++ GL GQ ++A
Sbjct: 347 VSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEAL 406
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
LK M E G PD YN I YC A+ + A LMDEMV GL + T N
Sbjct: 407 GRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNL 466
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ L G +P+ S ++ ++ K E AL LW++M ++ I
Sbjct: 467 CKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSI 526
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ L LC +GKL EA E+++KG P ++ I
Sbjct: 527 YTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNII 567
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 101/218 (46%), Gaps = 1/218 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G+ PD+V+YN L+ +C+ + +A ++ +M+ E I+P +Y +++ +G
Sbjct: 236 MQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTLVSAYARLGW 295
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGL-SPNATTYN 119
+A +V++ M +G PD YN C A ++ +A L DEM + SP+ TYN
Sbjct: 296 IKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYN 355
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ + NL M G + + +VK R+ ++E AL M E+
Sbjct: 356 TLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEE 415
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHK 217
G ++ + L D C + +A EM+ G K
Sbjct: 416 GLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLK 453
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 120/276 (43%), Gaps = 36/276 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ GVK +V++N ++ C++ Q+E+A ++ M +E ++PDVI+Y ++I
Sbjct: 377 MRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARN 436
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLM----------------- 103
KA ++ EM G D N + N C KR +A L+
Sbjct: 437 VAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGT 496
Query: 104 ------------------DEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
DEM ++ L+P+ TYN + L + + +M G
Sbjct: 497 VMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKG 556
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
+P+ + ++ ++ +E A Q N M+E F ++ + L + LC GKL +A
Sbjct: 557 LVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAI 616
Query: 206 KSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQ 240
K F EKG K +++ I+AL + + AL
Sbjct: 617 KLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALH 652
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 103/222 (46%), Gaps = 1/222 (0%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ P+ ++N L+ +C + A + M+ +SPDV++Y +++ G +AR
Sbjct: 206 LHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEAR 265
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+L MK+ G P A YN + Y ++ A+ +++ M G P+ TYN+
Sbjct: 266 TLLARMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGL 325
Query: 126 YWSNDLRSSWNLYCRMMGTGCL-PNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + ++ L M + P+ + LV C + ++ AL L +M +KG S
Sbjct: 326 CQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSS 385
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ +++ LC G+L EA M E+G P +++ +
Sbjct: 386 LVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTL 427
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 107/248 (43%), Gaps = 1/248 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G+ P +YN L+ Y + +++A +VE M PD+ +Y + GL G+
Sbjct: 271 MKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGK 330
Query: 61 PDKARDVLKEMKEYGCY-PDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
D+A + EM+ PD YN + +R DA L++EM +KG+ + T+N
Sbjct: 331 VDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHN 390
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ + L + M G P+ + L+ + V A L ++MV
Sbjct: 391 IVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRS 450
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
G + L LC + EAE+ ++G P +VS+ + A NK E
Sbjct: 451 GLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPA 510
Query: 240 QNLSNKMA 247
L ++M+
Sbjct: 511 LYLWDEMS 518
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 99/213 (46%), Gaps = 3/213 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ PD +YN +I YCK+ +EKA++ KM + PDV++ +++ GL L G+ +KA
Sbjct: 556 GLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKA 615
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ + E G D YN I+ C + A +M +GL P+A TYN+
Sbjct: 616 IKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSA 675
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF--G 182
+ + N+ ++ +G L + + L+K + K ++ +D G G
Sbjct: 676 LSEAGRSEEAQNMLHKLDESGKL-SERFSYPLIKSSAEEVKTGKDPEVKSDCESGGNAKG 734
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
+ LC G+L EA+ EM++KG
Sbjct: 735 GDQESYNKSVKELCVGGQLKEAKAVLDEMMQKG 767
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 71/152 (46%), Gaps = 36/152 (23%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E G K D+++YN LI CKD V+ A M + PD +Y ++ L G+ +
Sbjct: 624 EKGKKVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSE 683
Query: 63 KARDVLKEMKEYG------CYP------------------------------DAAAYNAA 86
+A+++L ++ E G YP D +YN +
Sbjct: 684 EAQNMLHKLDESGKLSERFSYPLIKSSAEEVKTGKDPEVKSDCESGGNAKGGDQESYNKS 743
Query: 87 IRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
++ C+ +L++A ++DEM++KG+S +++TY
Sbjct: 744 VKELCVGGQLKEAKAVLDEMMQKGMSVDSSTY 775
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 55/110 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E KPD+V+ N L++ C ++EKA K+ E ++ DVI+Y ++I L G
Sbjct: 587 MLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGD 646
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKG 110
D A +M+ G PDA YN + A R +A ++ ++ E G
Sbjct: 647 VDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESG 696
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 69/177 (38%), Gaps = 2/177 (1%)
Query: 37 RDEDISPDVISYTSIIGGLGLV--GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAK 94
R + P + + +++ L P + DV + + +P+ +N + +C
Sbjct: 165 RRGHVRPSLQAANAVLSALARSPSTSPQASLDVFRSLIALRLHPNHYTFNLLVHTHCSKG 224
Query: 95 RLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCM 154
L DA + M GLSP+ TYN + L + L RM G P +
Sbjct: 225 TLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYN 284
Query: 155 FLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEM 211
LV R ++ A + M GF + +VL LC GK+ EA K EM
Sbjct: 285 TLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEM 341
>gi|449437410|ref|XP_004136485.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Cucumis sativus]
gi|449519964|ref|XP_004167004.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Cucumis sativus]
Length = 534
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 124/255 (48%), Gaps = 9/255 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G+ P++ +Y+ +ID C+ Q+ +A+ + +M D +P+ +++ ++I G+
Sbjct: 278 MKMAGISPNVYTYSIVIDALCRSGQITRAHDVFAEMLDAGCNPNSVTFNNLIRVHLRAGR 337
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+K V +MK C D YN I +C L +A +++ M + +PNA+++N
Sbjct: 338 TEKVLQVYNQMKRLRCAADLITYNFLIETHCKDDNLGEAIKVLNSMAKNDCTPNASSFNP 397
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDM---- 176
FR S D+ + ++ RM GC PNT + L+++ + ++ +L +M
Sbjct: 398 IFRCIAKSQDVNGAHRMFARMKEVGCKPNTVTYNILMRMFAVPKSADMIFKLKKEMDEEE 457
Query: 177 VEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMI-EKGHKPSQVSFRRIKALMELANK 235
VE F +Y L L C MG A F EMI EK KPS ++ + + A +
Sbjct: 458 VEPNFNTY----RELIALYCGMGHWNHAYMFFREMIDEKCIKPSMPLYKMVLEELRKAGQ 513
Query: 236 QEALQNLSNKMALFG 250
+ + L +KM G
Sbjct: 514 LKKHEELVDKMVERG 528
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 104/226 (46%), Gaps = 1/226 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ V+ +V+++ L+ Y + +A +M D + D+I+++++I L +
Sbjct: 174 MKARNVEITVVTFSMLVRRYVRAGLAAEAVHAFNRMEDYGCNADIIAFSNVISILCKKRR 233
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A+ +K + PD Y + + +C A + +A + EM G+SPN TY++
Sbjct: 234 AVEAQSFFDNLK-HKFEPDVIVYTSLVHGWCRAGDISEAESVFREMKMAGISPNVYTYSI 292
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
S + + +++ M+ GC PN+ + L+++ R + E LQ++N M
Sbjct: 293 VIDALCRSGQITRAHDVFAEMLDAGCNPNSVTFNNLIRVHLRAGRTEKVLQVYNQMKRLR 352
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ ++ + L + C L EA K M + P+ SF I
Sbjct: 353 CAADLITYNFLIETHCKDDNLGEAIKVLNSMAKNDCTPNASSFNPI 398
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 60/113 (53%), Gaps = 1/113 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E+G KP+ V+YN L+ ++ + + +K+ ++M +E++ P+ +Y +I +G
Sbjct: 418 MKEVGCKPNTVTYNILMRMFAVPKSADMIFKLKKEMDEEEVEPNFNTYRELIALYCGMGH 477
Query: 61 PDKARDVLKEMKEYGCY-PDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLS 112
+ A +EM + C P Y + A +L+ L+D+MVE+G +
Sbjct: 478 WNHAYMFFREMIDEKCIKPSMPLYKMVLEELRKAGQLKKHEELVDKMVERGFA 530
>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
Length = 650
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 108/222 (48%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G +PD ++YN ++ C++ V A K+++ M E PDV +Y ++ L GQ ++A
Sbjct: 189 GFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEA 248
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ +L +M + GC PD +N I C RL +A L ++ KG+SP+ T+N+
Sbjct: 249 KGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINA 308
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
D + L+ M +GC P+ + L+ K+ AL L DM G
Sbjct: 309 LCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRS 368
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + + D LC ++ EAE+ F +M +G + ++F +
Sbjct: 369 TITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTL 410
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 121/248 (48%), Gaps = 4/248 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV PD+ ++N LI+ CK A ++ E+M++ +PD ++Y ++I L +G+ KA
Sbjct: 294 GVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKA 353
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
D+LK+M+ GC YN I C R+ +A + D+M +G+S NA T+N
Sbjct: 354 LDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDG 413
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
+ ++ L +M+ G PN + L CK Q ++ A + M GF
Sbjct: 414 LCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCK-QGDIKKAADILETMTANGFEV 472
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI-KALMELANKQEALQNL 242
++ L + LC G+ A K M KG +P+ ++ + ++L N ++AL +L
Sbjct: 473 DVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDAL-SL 531
Query: 243 SNKMALFG 250
+MA G
Sbjct: 532 FREMAEVG 539
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 110/261 (42%), Gaps = 35/261 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+KPD+V++N L+ C+ QV A ++E+M ++PD ++T+++ G G
Sbjct: 80 MGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGS 139
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASG------------------- 101
+ A V M E GC N I YC R+ DA G
Sbjct: 140 IEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNT 199
Query: 102 ----------------LMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
+MD MV++G P+ TYN+ + L + + +M+ G
Sbjct: 200 FVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRG 259
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
CLP+ + L+ ++E AL L + KG + ++L + LC +G A
Sbjct: 260 CLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLAL 319
Query: 206 KSFLEMIEKGHKPSQVSFRRI 226
+ F EM G P +V++ +
Sbjct: 320 RLFEEMKNSGCTPDEVTYNTL 340
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 108/227 (47%), Gaps = 2/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M EMG V+ N LI+ YCK +VE A +++ + PD I+Y + + GL
Sbjct: 150 MLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDH 209
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A V+ M + G PD YN + C +L +A G++++MV++G P+ TT+N
Sbjct: 210 VGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNT 269
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
N L + +L ++ G P+ + L+ LCK + +AL+L+ +M
Sbjct: 270 LIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDP-HLALRLFEEMKNS 328
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G + + L D LC +GKL +A +M G S +++ I
Sbjct: 329 GCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTI 375
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 113/227 (49%), Gaps = 2/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G PD+ +YN +++ CK+ Q+E+A I+ +M D PD+ ++ ++I L +
Sbjct: 220 MVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNR 279
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A D+ +++ G PD +N I C A L +EM G +P+ TYN
Sbjct: 280 LEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNT 339
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
L + +L M TGC +T + ++ LCK+ ++E A ++++ M +
Sbjct: 340 LIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKM-RIEEAEEVFDQMDLQ 398
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G + + L D LC K+ +A + +MI +G +P+ +++ I
Sbjct: 399 GISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSI 445
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 100/198 (50%), Gaps = 5/198 (2%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ + +++N LID CKD++++ A++++ +M E + P+ I+Y SI+ G KA
Sbjct: 399 GISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKA 458
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
D+L+ M G D Y I C A R + A ++ M KG+ P YN +
Sbjct: 459 ADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQS 518
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKG--- 180
+ N++R + +L+ M G P+ + + + LC+ ++ A +MV+KG
Sbjct: 519 LFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIP 578
Query: 181 -FGSYILVSDVLFDLLCD 197
F S+ ++++ L +L D
Sbjct: 579 EFSSFRMLAEGLLNLGMD 596
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 111/260 (42%), Gaps = 36/260 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G PD V+YN LID C ++ KA +++ M I+Y +II GL +
Sbjct: 325 MKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMR 384
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A +V +M G +A +N I C K++ DA L+++M+ +GL PN TYN
Sbjct: 385 IEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNS 444
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCK------------------ 161
+ D++ + ++ M G + + L+ LCK
Sbjct: 445 ILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKG 504
Query: 162 ----------------RQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLC-DMGKLVEA 204
R+ + AL L+ +M E G L ++F LC G + EA
Sbjct: 505 MRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEA 564
Query: 205 EKSFLEMIEKGHKPSQVSFR 224
LEM++KG P SFR
Sbjct: 565 FDFMLEMVDKGFIPEFSSFR 584
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 116/249 (46%), Gaps = 2/249 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G++ D V YN L++V + +++ + +M I PDV+++ +++ L Q A
Sbjct: 49 GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTA 108
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+L+EM G PD + ++ + + A + M+E G S T N+
Sbjct: 109 VLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLING 168
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
+ + + + + G P+ + F+ LC+ + V AL++ + MV++G
Sbjct: 169 YCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQ-NDHVGHALKVMDVMVQEGHDP 227
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLS 243
+ +++ + LC G+L EA+ +M+++G P +F + A + N+ E +L+
Sbjct: 228 DVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLA 287
Query: 244 NKMALFGPS 252
++ + G S
Sbjct: 288 RQVTVKGVS 296
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/150 (20%), Positives = 69/150 (46%)
Query: 74 YGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRS 133
+G D YN + +++ + EM +G+ P+ T+N + ++ +R+
Sbjct: 48 FGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRT 107
Query: 134 SWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFD 193
+ + M G P+ + L++ + +E AL++ M+E G + + +VL +
Sbjct: 108 AVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLIN 167
Query: 194 LLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
C +G++ +A + I G +P Q+++
Sbjct: 168 GYCKLGRVEDALGYIQQEIADGFEPDQITY 197
>gi|115463377|ref|NP_001055288.1| Os05g0355200 [Oryza sativa Japonica Group]
gi|55168028|gb|AAV43896.1| unknown protein [Oryza sativa Japonica Group]
gi|55168069|gb|AAV43937.1| unknown protein [Oryza sativa Japonica Group]
gi|113578839|dbj|BAF17202.1| Os05g0355200 [Oryza sativa Japonica Group]
Length = 632
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 123/253 (48%), Gaps = 5/253 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+KPD+V +N +I+ + ++ +A K+ E M+ + +P+V +YT +I G+
Sbjct: 350 MLENGLKPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPAPNVWTYTMLIRDHCKRGK 409
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A +EM++ GC PD A Y + Y AKR+ + L++EM +KG P+ TYN
Sbjct: 410 MDMAMRCFEEMQDVGCQPDVATYTCLLVGYGNAKRMDRVTALLEEMTQKGCPPDGRTYNA 469
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK---LCKRQEKVEIALQLWNDMV 177
++ N + +Y +M+ G P + ++K L R + A +W +M
Sbjct: 470 LIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFLGGRNYMMGCA--VWEEMH 527
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQE 237
KG + V + G+ EA K EMI+KG K Q+ + + A A K +
Sbjct: 528 RKGICPDVNSYTVFINGHIRHGRPEEACKYIEEMIQKGMKTPQIDYNKFAADFSKAGKPD 587
Query: 238 ALQNLSNKMALFG 250
L L+ K+ G
Sbjct: 588 ILYELAQKVKFTG 600
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 102/222 (45%), Gaps = 7/222 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G + S+NCL+ ++ +A ++ ++MRD +PD+ SYT+++
Sbjct: 281 MRTHGFDDGVESFNCLLVALAQEGLGREANQVFDRMRDR-YAPDLRSYTALMLAWCNARN 339
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A V EM E G PD +N I +R +A + + M KG +PN TY +
Sbjct: 340 LVEAGRVWNEMLENGLKPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPAPNVWTYTM 399
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPN--TQSCMFL-VKLCKRQEKVEIALQLWNDMV 177
R + + + M GC P+ T +C+ + KR ++V L+ +M
Sbjct: 400 LIRDHCKRGKMDMAMRCFEEMQDVGCQPDVATYTCLLVGYGNAKRMDRVTALLE---EMT 456
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
+KG + L LL + +A + + +MI+KG +P+
Sbjct: 457 QKGCPPDGRTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPT 498
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 78/176 (44%), Gaps = 4/176 (2%)
Query: 45 VISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMD 104
I+Y ++ LG Q +++EM + G A+ AI+++ A +++A G+ +
Sbjct: 221 TITYCKMVHILGKARQFQSMVALIQEMGKEGALC-MDAFKIAIKSFAAAGEIKNAVGVFE 279
Query: 105 EMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQ 163
M G ++N R + ++ RM P+ +S ++ C +
Sbjct: 280 MMRTHGFDDGVESFNCLLVALAQEGLGREANQVFDRMRDR-YAPDLRSYTALMLAWCNAR 338
Query: 164 EKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
VE A ++WN+M+E G ++V + + + L + EA K F M KG P+
Sbjct: 339 NLVE-AGRVWNEMLENGLKPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPAPN 393
>gi|356519375|ref|XP_003528348.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 589
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 118/231 (51%), Gaps = 3/231 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ P++ ++N L+D +CKD + +A I+ M + PDV++Y S+I G L+ Q
Sbjct: 273 MMRKGIMPNVQTFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQ 332
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A V + M G P+ Y++ I +C K + A L+ EMV GL+P+ T++
Sbjct: 333 MGDAVKVFELMIHKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWST 392
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSC-MFLVKLCKRQEKVEIALQLWNDMVEK 179
F + ++ L+C M PN Q+C + L L K Q E A+ L+ +M +
Sbjct: 393 LIGGFCKAGKPEAAKELFCTMHEHDQHPNLQTCAIILDGLFKCQFHSE-AISLFREMEKM 451
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKAL 229
+++ +++ D +C GKL +A++ F + KG K V++ IK L
Sbjct: 452 NLELNVVIYNIVLDGMCSFGKLNDAQELFSCLPSKGIKIDVVAYTTMIKGL 502
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%)
Query: 10 IVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLK 69
+++Y+ ++D CKD V +A + M + I PD+++Y S+I GL G+ +A +L
Sbjct: 212 VIAYSTIMDSLCKDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLG 271
Query: 70 EMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSN 129
M G P+ +N + N+C + A +M MV G+ P+ TYN +
Sbjct: 272 NMMRKGIMPNVQTFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLS 331
Query: 130 DLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSD 189
+ + ++ M+ G LPN + L+ + + + AL L +MV G ++
Sbjct: 332 QMGDAVKVFELMIHKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWS 391
Query: 190 VLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
L C GK A++ F M E P+
Sbjct: 392 TLIGGFCKAGKPEAAKELFCTMHEHDQHPN 421
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 109/243 (44%), Gaps = 1/243 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPD-VISYTSIIGGLGLVG 59
+ +MG + + +Y +I+ CK A +EK++ + D VI+Y++I+ L G
Sbjct: 167 LEDMGHQSNSYTYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDVVIAYSTIMDSLCKDG 226
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+A ++ M G PD AYN+ I C R ++A+ L+ M+ KG+ PN T+N
Sbjct: 227 MVCEALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPNVQTFN 286
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ F + + + M+ G P+ + ++ ++ A++++ M+ K
Sbjct: 287 VLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKVFELMIHK 346
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
GF ++ L C + +A EM+ G P V++ + A K EA
Sbjct: 347 GFLPNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGKPEAA 406
Query: 240 QNL 242
+ L
Sbjct: 407 KEL 409
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 78/184 (42%), Gaps = 35/184 (19%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P++V+Y+ LI +CK + + KA ++ +M + ++PDV++++++IGG G+
Sbjct: 343 MIHKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGK 402
Query: 61 PDKARDVLKEMKEYGCYPD-----------------------------------AAAYNA 85
P+ A+++ M E+ +P+ YN
Sbjct: 403 PEAAKELFCTMHEHDQHPNLQTCAIILDGLFKCQFHSEAISLFREMEKMNLELNVVIYNI 462
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
+ C +L DA L + KG+ + Y + L + NL +M G
Sbjct: 463 VLDGMCSFGKLNDAQELFSCLPSKGIKIDVVAYTTMIKGLCKEGLLDDAENLLMKMEENG 522
Query: 146 CLPN 149
CLPN
Sbjct: 523 CLPN 526
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/260 (20%), Positives = 96/260 (36%), Gaps = 36/260 (13%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
+G+KPD+ + +I+ C + ++ M + P V+++ ++I GL G
Sbjct: 99 SLGIKPDVYTLTIIINCLCHLNHTVFGFSVLGVMFKIGVDPTVVTFATLINGLCAEGNVA 158
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDA--------------------SGL 102
+A +++ G ++ Y A I C A A S +
Sbjct: 159 RAARFADSLEDMGHQSNSYTYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDVVIAYSTI 218
Query: 103 MDE----------------MVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGC 146
MD M KG+ P+ YN + + L MM G
Sbjct: 219 MDSLCKDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGI 278
Query: 147 LPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEK 206
+PN Q+ LV + + A + MV G ++ + + C + ++ +A K
Sbjct: 279 MPNVQTFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVK 338
Query: 207 SFLEMIEKGHKPSQVSFRRI 226
F MI KG P+ V++ +
Sbjct: 339 VFELMIHKGFLPNLVTYSSL 358
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 74/192 (38%), Gaps = 35/192 (18%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPD---------------- 44
M G+ PD+V+++ LI +CK + E A ++ M + D P+
Sbjct: 378 MVNSGLNPDVVTWSTLIGGFCKAGKPEAAKELFCTMHEHDQHPNLQTCAIILDGLFKCQF 437
Query: 45 -------------------VISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNA 85
V+ Y ++ G+ G+ + A+++ + G D AY
Sbjct: 438 HSEAISLFREMEKMNLELNVVIYNIVLDGMCSFGKLNDAQELFSCLPSKGIKIDVVAYTT 497
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
I+ C L DA L+ +M E G PN TYN+F R D+ S M G G
Sbjct: 498 MIKGLCKEGLLDDAENLLMKMEENGCLPNEFTYNVFVRGLLQRYDISRSTKYLLLMKGKG 557
Query: 146 CLPNTQSCMFLV 157
+ + L+
Sbjct: 558 LSADATTTELLI 569
>gi|222628656|gb|EEE60788.1| hypothetical protein OsJ_14372 [Oryza sativa Japonica Group]
Length = 748
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 109/224 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E V PD+V+YN LID CK +++ K+ +++E+M D I P+ +Y S+I G G
Sbjct: 183 MIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYSTAGM 242
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++ V KEM G P N+ I C R+++A + D MV KG PN +Y+
Sbjct: 243 WKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIISYST 302
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + +L M+ G +PN + L+ R ++ A+ ++ DM KG
Sbjct: 303 LLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKG 362
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
+ + LC +G+L +A F M++ G PS+ +R
Sbjct: 363 MIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYR 406
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 100/217 (46%), Gaps = 2/217 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P I +YN LID Y + + E A + ++ + PDV SY ++I G G+ DKA ++
Sbjct: 120 PTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYEL 179
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
+M E PD YN+ I C K + + ++++MV+ G+ PN TYN +
Sbjct: 180 FYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYST 239
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSC-MFLVKLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+ + S ++ M +G +P +C F+ LC R +++ A +++ MV KG I+
Sbjct: 240 AGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALC-RHNRIKEAKDIFDSMVLKGPKPNII 298
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
L G M+ KG P+ F
Sbjct: 299 SYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFF 335
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 121/262 (46%), Gaps = 5/262 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISY-TSIIGGLGLVG 59
M ++GV P Y CLI C ++ KA +++ +M ++DI P + Y +SII L G
Sbjct: 393 MVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEG 452
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ + +D++ M + G P+ +N+ + YC+ + +A L+D M G+ PN Y
Sbjct: 453 RVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYG 512
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ + + + ++ M+ G P + ++ + + A +++++M+E
Sbjct: 513 TLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIES 572
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEA 238
G I V+ LC EA ++ K ++F I A++++ +QEA
Sbjct: 573 GTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEA 632
Query: 239 LQNLSNKMALFGPSMIPKREEY 260
+ L ++ +G ++P Y
Sbjct: 633 -KELFAAISTYG--LVPTVHTY 651
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 112/254 (44%), Gaps = 1/254 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ P+ +N LI+ Y + ++KA I E M+++ + PD +++ ++I L +G+
Sbjct: 323 MVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGR 382
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY-N 119
D A M + G P A Y I+ C L A L+ EM+ K + P Y +
Sbjct: 383 LDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFS 442
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ + ++ M+ TG PN + L++ +E A L + M
Sbjct: 443 SIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASI 502
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
G + L D C G++ +A F +M+ KG KP+ V + I + A + A
Sbjct: 503 GIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAA 562
Query: 240 QNLSNKMALFGPSM 253
+ + ++M G ++
Sbjct: 563 KKMFHEMIESGTTV 576
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 82/182 (45%)
Query: 42 SPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASG 101
+P + +Y +I + +P+ A V + G PD +YN I + + A
Sbjct: 119 APTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYE 178
Query: 102 LMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCK 161
L +M+E+ +SP+ TYN + ++ S + +M+ G PN ++ L+
Sbjct: 179 LFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYS 238
Query: 162 RQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQV 221
+ +++++ +M G ++ + LC ++ EA+ F M+ KG KP+ +
Sbjct: 239 TAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNII 298
Query: 222 SF 223
S+
Sbjct: 299 SY 300
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/180 (19%), Positives = 76/180 (42%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G++P+ Y L+D YCK+ +++ A + M + + P + Y I+ GL +
Sbjct: 499 MASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARR 558
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A+ + EM E G Y + C +A+ L++++ + + T+N+
Sbjct: 559 TTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNI 618
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + L+ + G +P + ++ ++E E A L+ + + G
Sbjct: 619 VISAMLKVGRRQEAKELFAAISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSG 678
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/115 (20%), Positives = 59/115 (51%)
Query: 112 SPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQ 171
+P TYN+ + + + ++ R++ TG P+ S L+ ++ +V+ A +
Sbjct: 119 APTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYE 178
Query: 172 LWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
L+ M+E+ ++ + L D LC ++V++E+ +M++ G +P+ ++ +
Sbjct: 179 LFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSL 233
>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
Length = 649
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 114/226 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ V PD+VS++CLI ++ + +++ A + +M+ + PD + YT +IGG G
Sbjct: 288 MQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGS 347
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A V EM +GC PD YN + C RL DA L++EM E+G++P+ T+
Sbjct: 348 MSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTT 407
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + ++ L+ ++ P+ + L+ R+ + A +LW+DM +
Sbjct: 408 LIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHARE 467
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ +L D C+ G++ +A EM++KG+ P+ ++ I
Sbjct: 468 ILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSI 513
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 111/223 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + V PD+ S+N LI +C+ +V++A K ++M+ ++PDV+S++ +IG G+
Sbjct: 253 MDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGE 312
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A L+EMK G PD Y I +C A + +A + DEMV G P+ TYN
Sbjct: 313 MDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNT 372
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L + L M G P+ + L+ RQ E ALQL++ ++ +
Sbjct: 373 LLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQR 432
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + L D +C G L +A + + +M + P+ +++
Sbjct: 433 LRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITY 475
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 117/241 (48%), Gaps = 1/241 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E GV PD+ ++ LI YC+ E A ++ + + + + PDV++Y S+I G+ G
Sbjct: 393 MEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGD 452
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA ++ +M P+ Y+ I ++C ++ DA G +DEMV+KG PN TYN
Sbjct: 453 LAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNS 512
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + S +++ +M P+ + L+ ++E + A ++N M ++
Sbjct: 513 IIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEM 572
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
+ +++ + + G + +A + F M + G +P + ++ I + N ++A
Sbjct: 573 VRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAF 632
Query: 240 Q 240
Q
Sbjct: 633 Q 633
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 117/238 (49%), Gaps = 5/238 (2%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
V PD+V++N LID + V+ A +V+ M + + P +++Y S++ GL + DKA+
Sbjct: 188 VFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAK 247
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+V + M + PD ++N I +C +++A EM + ++P+ +++ +F
Sbjct: 248 EVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLF 307
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY- 184
++ + M G G +P+ ++ R + AL++ ++MV GFG
Sbjct: 308 SRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMV--GFGCLP 365
Query: 185 -ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQ 240
++ + L + LC +L++AEK EM E+G P +F I N + ALQ
Sbjct: 366 DVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQ 423
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 106/224 (47%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+KP IV+YN ++ CK R+ +KA ++ M ++PDV S+ +IGG VG+
Sbjct: 218 MANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGE 277
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A KEM+ PD +++ I + + A + EM GL P+ Y +
Sbjct: 278 VKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTM 337
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
F + + + + M+G GCLP+ + L+ LCK Q ++ A +L N+M E+
Sbjct: 338 VIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCK-QHRLLDAEKLLNEMEER 396
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G + L C G A + F ++ + +P V++
Sbjct: 397 GVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTY 440
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 57/114 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ V PD++++N LI Y K+ + A+ + M E + PD ++Y II G G
Sbjct: 533 MRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGN 592
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPN 114
A V K M + G PD Y + I + A + A L DEM+ +G +P+
Sbjct: 593 MQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRGFAPD 646
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 74/149 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G P+I +YN +I YC+ V+K + ++KMR +++ PD+I++ ++I G
Sbjct: 498 MVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEEN 557
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +V M++ PDA YN I + ++DA + M + G+ P+ TY
Sbjct: 558 MHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMS 617
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPN 149
+ + + ++ L+ M+ G P+
Sbjct: 618 LINGHVTAGNSKQAFQLHDEMIHRGFAPD 646
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/217 (20%), Positives = 95/217 (43%), Gaps = 2/217 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P ++ LI Y + R+ +A++ + D + + +++ L G P A++
Sbjct: 85 PQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAVLSRAGWPHLAQEA 144
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
+ + +A N + +YC A ++ EM ++ + P+ T+N+ +
Sbjct: 145 YRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFR 204
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+ D+ ++ L M G P + ++K LCK + + + A +++ M + +
Sbjct: 205 AGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHR-RFDKAKEVFRTMDQCSVAPDVR 263
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++L C +G++ EA K + EM + P VSF
Sbjct: 264 SFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSF 300
>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 579
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 115/224 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + +P++ +YN +ID CKDRQV +A+ + +M + ISPD+ +Y S+I L + +
Sbjct: 192 MVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCE 251
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+L EM + PD ++N + C ++ +A ++D+M+++G+ PN TY
Sbjct: 252 WKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTA 311
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+++ + ++ M+ GC+PN S L+ + ++++ A+ L+ +M +
Sbjct: 312 LMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQE 371
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
+ L LC + +L +A F EM+ P+ V++R
Sbjct: 372 LIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYR 415
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 110/219 (50%), Gaps = 2/219 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + + PD+VS+N ++D CK+ +V +A+ +V+KM + P+V++YT+++ G L+ +
Sbjct: 262 MVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSE 321
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A V M GC P+ +YN I YC +R+ A L EM + L P+ TY+
Sbjct: 322 MDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYST 381
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
L+ + L+ M+ +PN + L+ LCK + E A+ L +
Sbjct: 382 LIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAE-AMALLKAIEGS 440
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
I V+++ D +C G+L A F + KG +P
Sbjct: 441 NLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQP 479
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 123/262 (46%), Gaps = 10/262 (3%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
++G +PD ++ LI + ++ +A + +KM E PDV++Y ++I GL VG
Sbjct: 124 KLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTS 183
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
A +L M + C P+ AYN I + C +++ +A L EMV KG+SP+ TYN
Sbjct: 184 AAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLI 243
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
+ + L M+ + +P+ S +V ++ KV A + + M+++G
Sbjct: 244 HALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVE 303
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNL 242
++ L D C + ++ EA K F M+ KG P+ +S+ L N +Q +
Sbjct: 304 PNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYN------TLINGYCKIQRI 357
Query: 243 SNKMALFG----PSMIPKREEY 260
M LFG +IP Y
Sbjct: 358 DKAMYLFGEMCRQELIPDTVTY 379
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 104/215 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV+P++V+Y L+D +C ++++A K+ + M + P+VISY ++I G + +
Sbjct: 297 MIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQR 356
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA + EM PD Y+ I C +RL+DA L EMV PN TY +
Sbjct: 357 IDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRI 416
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L + L + G+ P+ Q + R ++E A L++++ KG
Sbjct: 417 LLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKG 476
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
+ ++ + LC G L EA K F EM E G
Sbjct: 477 LQPDVWTYSIMINGLCRRGLLDEASKLFREMDENG 511
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 115/250 (46%), Gaps = 6/250 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ PDI +YN LI C + + ++ +M D I PDV+S+ +++ L G+
Sbjct: 227 MVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGK 286
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A DV+ +M + G P+ Y A + +C+ + +A + D MV KG PN +YN
Sbjct: 287 VTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNT 346
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + L+ M +P+T + L+ E+++ A+ L+++MV
Sbjct: 347 LINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACS 406
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKA-----LMELANK 235
++ +L D LC L EA + L+ IE + + I EL
Sbjct: 407 QIPNLVTYRILLDYLCKNRYLAEA-MALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAA 465
Query: 236 QEALQNLSNK 245
++ NLS+K
Sbjct: 466 RDLFSNLSSK 475
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 95/227 (41%), Gaps = 2/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M M P V +N L+ K + + +M I P++ + +I + +
Sbjct: 52 MLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNR 111
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A VL ++ + G PD A + IR + ++ +A L D+M+ +G P+ TY
Sbjct: 112 VGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGT 171
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEK 179
+ ++ L M+ C PN + ++ LCK ++ E A L+++MV K
Sbjct: 172 LINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTE-AFNLFSEMVTK 230
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G I + L LC++ + EM++ P VSF +
Sbjct: 231 GISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTV 277
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 71/152 (46%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P++V+Y L+D CK+R + +A +++ + ++ PD+ I G+ G+ + ARD+
Sbjct: 409 PNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDL 468
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
+ G PD Y+ I C L +AS L EM E G + N YN R F
Sbjct: 469 FSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLR 528
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKL 159
+N+ + L M+ G + + VK+
Sbjct: 529 NNETSRAIQLLQEMVARGFSADASTMTLFVKM 560
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 97/232 (41%), Gaps = 39/232 (16%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G P+++SYN LI+ YCK ++++KA + +M +++ PD ++Y+++I GL V + A
Sbjct: 336 GCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDA 395
Query: 65 RDVLKEMK---------------EYGCY--------------------PDAAAYNAAIRN 89
+ EM +Y C PD N AI
Sbjct: 396 IALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDG 455
Query: 90 YCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPN 149
C A L A L + KGL P+ TY++ L + L+ M GC N
Sbjct: 456 MCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLN 515
Query: 150 TQSCMF--LVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMG 199
C++ + + R + A+QL +MV +GF + + +L D G
Sbjct: 516 --GCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDG 565
>gi|222631252|gb|EEE63384.1| hypothetical protein OsJ_18196 [Oryza sativa Japonica Group]
Length = 378
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 123/253 (48%), Gaps = 5/253 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+KPD+V +N +I+ + ++ +A K+ E M+ + +P+V +YT +I G+
Sbjct: 96 MLENGLKPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPAPNVWTYTMLIRDHCKRGK 155
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A +EM++ GC PD A Y + Y AKR+ + L++EM +KG P+ TYN
Sbjct: 156 MDMAMRCFEEMQDVGCQPDVATYTCLLVGYGNAKRMDRVTALLEEMTQKGCPPDGRTYNA 215
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK---LCKRQEKVEIALQLWNDMV 177
++ N + +Y +M+ G P + ++K L R + A +W +M
Sbjct: 216 LIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFLGGRNYMMGCA--VWEEMH 273
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQE 237
KG + V + G+ EA K EMI+KG K Q+ + + A A K +
Sbjct: 274 RKGICPDVNSYTVFINGHIRHGRPEEACKYIEEMIQKGMKTPQIDYNKFAADFSKAGKPD 333
Query: 238 ALQNLSNKMALFG 250
L L+ K+ G
Sbjct: 334 ILYELAQKVKFTG 346
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 102/222 (45%), Gaps = 7/222 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G + S+NCL+ ++ +A ++ ++MRD +PD+ SYT+++
Sbjct: 27 MRTHGFDDGVESFNCLLVALAQEGLGREANQVFDRMRDR-YAPDLRSYTALMLAWCNARN 85
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A V EM E G PD +N I +R +A + + M KG +PN TY +
Sbjct: 86 LVEAGRVWNEMLENGLKPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPAPNVWTYTM 145
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPN--TQSCMFL-VKLCKRQEKVEIALQLWNDMV 177
R + + + M GC P+ T +C+ + KR ++V L+ +M
Sbjct: 146 LIRDHCKRGKMDMAMRCFEEMQDVGCQPDVATYTCLLVGYGNAKRMDRVTALLE---EMT 202
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
+KG + L LL + +A + + +MI+KG +P+
Sbjct: 203 QKGCPPDGRTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPT 244
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 65/143 (45%), Gaps = 3/143 (2%)
Query: 82 AYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRM 141
A+ AI+++ A +++A G+ + M G ++N R + ++ RM
Sbjct: 3 AFKIAIKSFAAAGEIKNAVGVFEMMRTHGFDDGVESFNCLLVALAQEGLGREANQVFDRM 62
Query: 142 MGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGK 200
P+ +S ++ C + VE A ++WN+M+E G ++V + + + L +
Sbjct: 63 RDR-YAPDLRSYTALMLAWCNARNLVE-AGRVWNEMLENGLKPDVVVHNTMIEGLLRGQR 120
Query: 201 LVEAEKSFLEMIEKGHKPSQVSF 223
EA K F M KG P+ ++
Sbjct: 121 RPEAVKMFELMKAKGPAPNVWTY 143
>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
Length = 742
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 108/222 (48%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G +PD ++YN ++ C++ V A K+++ M E PDV +Y ++ L GQ ++A
Sbjct: 281 GFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEA 340
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ +L +M + GC PD +N I C RL +A L ++ KG+SP+ T+N+
Sbjct: 341 KGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINA 400
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
D + L+ M +GC P+ + L+ K+ AL L DM G
Sbjct: 401 LCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRS 460
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + + D LC ++ EAE+ F +M +G + ++F +
Sbjct: 461 TITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTL 502
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 121/248 (48%), Gaps = 4/248 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV PD+ ++N LI+ CK A ++ E+M++ +PD ++Y ++I L +G+ KA
Sbjct: 386 GVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKA 445
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
D+LK+M+ GC YN I C R+ +A + D+M +G+S NA T+N
Sbjct: 446 LDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDG 505
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
+ ++ L +M+ G PN + L CK Q ++ A + M GF
Sbjct: 506 LCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCK-QGDIKKAADILETMTANGFEV 564
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI-KALMELANKQEALQNL 242
++ L + LC G+ A K M KG +P+ ++ + ++L N ++AL +L
Sbjct: 565 DVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDAL-SL 623
Query: 243 SNKMALFG 250
+MA G
Sbjct: 624 FREMAEVG 631
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 110/261 (42%), Gaps = 35/261 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+KPD+V++N L+ C+ QV A ++E+M ++PD ++T+++ G G
Sbjct: 172 MGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGS 231
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASG------------------- 101
+ A V M E GC N I YC R+ DA G
Sbjct: 232 IEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNT 291
Query: 102 ----------------LMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
+MD MV++G P+ TYN+ + L + + +M+ G
Sbjct: 292 FVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRG 351
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
CLP+ + L+ ++E AL L + KG + ++L + LC +G A
Sbjct: 352 CLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLAL 411
Query: 206 KSFLEMIEKGHKPSQVSFRRI 226
+ F EM G P +V++ +
Sbjct: 412 RLFEEMKNSGCTPDEVTYNTL 432
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 108/227 (47%), Gaps = 2/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M EMG V+ N LI+ YCK +VE A +++ + PD I+Y + + GL
Sbjct: 242 MLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDH 301
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A V+ M + G PD YN + C +L +A G++++MV++G P+ TT+N
Sbjct: 302 VGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNT 361
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
N L + +L ++ G P+ + L+ LCK + +AL+L+ +M
Sbjct: 362 LIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDP-HLALRLFEEMKNS 420
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G + + L D LC +GKL +A +M G S +++ I
Sbjct: 421 GCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTI 467
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 113/227 (49%), Gaps = 2/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G PD+ +YN +++ CK+ Q+E+A I+ +M D PD+ ++ ++I L +
Sbjct: 312 MVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNR 371
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A D+ +++ G PD +N I C A L +EM G +P+ TYN
Sbjct: 372 LEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNT 431
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
L + +L M TGC +T + ++ LCK+ ++E A ++++ M +
Sbjct: 432 LIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKM-RIEEAEEVFDQMDLQ 490
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G + + L D LC K+ +A + +MI +G +P+ +++ I
Sbjct: 491 GISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSI 537
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 100/198 (50%), Gaps = 5/198 (2%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ + +++N LID CKD++++ A++++ +M E + P+ I+Y SI+ G KA
Sbjct: 491 GISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKA 550
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
D+L+ M G D Y I C A R + A ++ M KG+ P YN +
Sbjct: 551 ADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQS 610
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKG--- 180
+ N++R + +L+ M G P+ + + + LC+ ++ A +MV+KG
Sbjct: 611 LFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIP 670
Query: 181 -FGSYILVSDVLFDLLCD 197
F S+ ++++ L +L D
Sbjct: 671 EFSSFRMLAEGLLNLGMD 688
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 111/260 (42%), Gaps = 36/260 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G PD V+YN LID C ++ KA +++ M I+Y +II GL +
Sbjct: 417 MKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMR 476
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A +V +M G +A +N I C K++ DA L+++M+ +GL PN TYN
Sbjct: 477 IEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNS 536
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCK------------------ 161
+ D++ + ++ M G + + L+ LCK
Sbjct: 537 ILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKG 596
Query: 162 ----------------RQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLC-DMGKLVEA 204
R+ + AL L+ +M E G L ++F LC G + EA
Sbjct: 597 MRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEA 656
Query: 205 EKSFLEMIEKGHKPSQVSFR 224
LEM++KG P SFR
Sbjct: 657 FDFMLEMVDKGFIPEFSSFR 676
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 116/249 (46%), Gaps = 2/249 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G++ D V YN L++V + +++ + +M I PDV+++ +++ L Q A
Sbjct: 141 GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTA 200
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+L+EM G PD + ++ + + A + M+E G S T N+
Sbjct: 201 VIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLING 260
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
+ + + + + G P+ + F+ LC+ + V AL++ + MV++G
Sbjct: 261 YCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQ-NDHVGHALKVMDVMVQEGHDP 319
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLS 243
+ +++ + LC G+L EA+ +M+++G P +F + A + N+ E +L+
Sbjct: 320 DVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLA 379
Query: 244 NKMALFGPS 252
++ + G S
Sbjct: 380 RQVTVKGVS 388
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/150 (20%), Positives = 69/150 (46%)
Query: 74 YGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRS 133
+G D YN + +++ + EM +G+ P+ T+N + ++ +R+
Sbjct: 140 FGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRT 199
Query: 134 SWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFD 193
+ + M G P+ + L++ + +E AL++ M+E G + + +VL +
Sbjct: 200 AVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLIN 259
Query: 194 LLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
C +G++ +A + I G +P Q+++
Sbjct: 260 GYCKLGRVEDALGYIQQEIADGFEPDQITY 289
>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 107/201 (53%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD V+Y L+D YCK R++ +A++++ +M D ++ P V+++ ++ G + G
Sbjct: 424 MEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGM 483
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ +LK M E G P+A YN+ I+ YCI +R + + M KG+ P+ TYN+
Sbjct: 484 LEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNI 543
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + +++ +W L+ M+G G S L+K +++K A +L+ M +G
Sbjct: 544 LIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREG 603
Query: 181 FGSYILVSDVLFDLLCDMGKL 201
+ + ++ D+ D GK+
Sbjct: 604 LVADREIYNIFADINYDEGKM 624
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 117/250 (46%), Gaps = 35/250 (14%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +MG+ P+IV+Y L D CK +V+ A +++ +M + + ++ +Y S++ GL G
Sbjct: 354 MLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGN 413
Query: 61 PDKARDVLKEMKEYGCYPDAAAY-----------------------------------NA 85
D+A ++K+M+ G +PDA Y N
Sbjct: 414 IDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNV 473
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
+ +C++ L D L+ M+EKG+ PNATTYN + + N++R++ +Y M G
Sbjct: 474 LMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKG 533
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
+P+ + L+K + ++ A L DMV KGF + + L K +EA
Sbjct: 534 VVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEAR 593
Query: 206 KSFLEMIEKG 215
+ F +M +G
Sbjct: 594 ELFEQMRREG 603
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 112/224 (50%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G+KP+ +YN +I + CK +V +A +++ +M E I+PD + YT++I G +G
Sbjct: 214 MQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGN 273
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A + EM++ PD Y A I C R+ +A L EMV K L P+ TY
Sbjct: 274 VSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTA 333
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+ ++ +++L+ +M+ G PN + L LCK E V+ A +L ++M K
Sbjct: 334 LIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGE-VDTANELLHEMCRK 392
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G I + L + LC G + +A K +M G P V++
Sbjct: 393 GLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTY 436
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 117/261 (44%), Gaps = 4/261 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ + PD ++Y +I C+ +V +A K+ +M + + PD ++YT++I G G+
Sbjct: 284 MQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGK 343
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + +M + G P+ Y A C + A+ L+ EM KGL N TYN
Sbjct: 344 MKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNS 403
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEK 179
+ ++ + L M G P+ + L+ CK +E V A +L M+++
Sbjct: 404 LVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVR-AHELLRQMLDR 462
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
++ +VL + C G L + EK M+EKG P+ ++ + + N A
Sbjct: 463 ELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRAT 522
Query: 240 QNLSNKMALFGPSMIPKREEY 260
+ M G ++P Y
Sbjct: 523 TEIYRGMCAKG--VVPDGNTY 541
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 106/230 (46%), Gaps = 2/230 (0%)
Query: 27 EKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAA 86
E K++E+M+ + + P+ +Y +I L G+ +A VL+EM G PD Y
Sbjct: 205 EWVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTL 264
Query: 87 IRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGC 146
I +C + A L DEM ++ +SP+ TY + + + L+ M+
Sbjct: 265 IDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRL 324
Query: 147 LPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEK 206
P+ + L+ ++ K++ A L N M++ G I+ L D LC G++ A +
Sbjct: 325 EPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANE 384
Query: 207 SFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLSN-KMALFGPSMI 254
EM KG + + ++ + L + N +A++ + + ++A F P +
Sbjct: 385 LLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAV 434
>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
Group]
gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
Length = 742
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 108/222 (48%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G +PD ++YN ++ C++ V A K+++ M E PDV +Y ++ L GQ ++A
Sbjct: 281 GFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEA 340
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ +L +M + GC PD +N I C RL +A L ++ KG+SP+ T+N+
Sbjct: 341 KGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINA 400
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
D + L+ M +GC P+ + L+ K+ AL L DM G
Sbjct: 401 LCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRS 460
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + + D LC ++ EAE+ F +M +G + ++F +
Sbjct: 461 TITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTL 502
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 121/248 (48%), Gaps = 4/248 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV PD+ ++N LI+ CK A ++ E+M++ +PD ++Y ++I L +G+ KA
Sbjct: 386 GVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKA 445
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
D+LK+M+ GC YN I C R+ +A + D+M +G+S NA T+N
Sbjct: 446 LDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDG 505
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
+ ++ L +M+ G PN + L CK Q ++ A + M GF
Sbjct: 506 LCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCK-QGDIKKAADILETMTANGFEV 564
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI-KALMELANKQEALQNL 242
++ L + LC G+ A K M KG +P+ ++ + ++L N ++AL +L
Sbjct: 565 DVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDAL-SL 623
Query: 243 SNKMALFG 250
+MA G
Sbjct: 624 FREMAEVG 631
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 110/261 (42%), Gaps = 35/261 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+KPD+V++N L+ C+ QV A ++E+M ++PD ++T+++ G G
Sbjct: 172 MGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGS 231
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASG------------------- 101
+ A V M E GC N I YC R+ DA G
Sbjct: 232 IEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNT 291
Query: 102 ----------------LMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
+MD MV++G P+ TYN+ + L + + +M+ G
Sbjct: 292 FVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRG 351
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
CLP+ + L+ ++E AL L + KG + ++L + LC +G A
Sbjct: 352 CLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLAL 411
Query: 206 KSFLEMIEKGHKPSQVSFRRI 226
+ F EM G P +V++ +
Sbjct: 412 RLFEEMKNSGCTPDEVTYNTL 432
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 108/227 (47%), Gaps = 2/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M EMG V+ N LI+ YCK +VE A +++ + PD I+Y + + GL
Sbjct: 242 MLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDH 301
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A V+ M + G PD YN + C +L +A G++++MV++G P+ TT+N
Sbjct: 302 VGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNT 361
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
N L + +L ++ G P+ + L+ LCK + +AL+L+ +M
Sbjct: 362 LIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDP-HLALRLFEEMKNS 420
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G + + L D LC +GKL +A +M G S +++ I
Sbjct: 421 GCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTI 467
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 113/227 (49%), Gaps = 2/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G PD+ +YN +++ CK+ Q+E+A I+ +M D PD+ ++ ++I L +
Sbjct: 312 MVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNR 371
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A D+ +++ G PD +N I C A L +EM G +P+ TYN
Sbjct: 372 LEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNT 431
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
L + +L M TGC +T + ++ LCK+ ++E A ++++ M +
Sbjct: 432 LIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKM-RIEEAEEVFDQMDLQ 490
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G + + L D LC K+ +A + +MI +G +P+ +++ I
Sbjct: 491 GISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSI 537
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 100/198 (50%), Gaps = 5/198 (2%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ + +++N LID CKD++++ A++++ +M E + P+ I+Y SI+ G KA
Sbjct: 491 GISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKA 550
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
D+L+ M G D Y I C A R + A ++ M KG+ P YN +
Sbjct: 551 ADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQS 610
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKG--- 180
+ N++R + +L+ M G P+ + + + LC+ ++ A +MV+KG
Sbjct: 611 LFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIP 670
Query: 181 -FGSYILVSDVLFDLLCD 197
F S+ ++++ L +L D
Sbjct: 671 EFSSFRMLAEGLLNLGMD 688
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 111/260 (42%), Gaps = 36/260 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G PD V+YN LID C ++ KA +++ M I+Y +II GL +
Sbjct: 417 MKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMR 476
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A +V +M G +A +N I C K++ DA L+++M+ +GL PN TYN
Sbjct: 477 IEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNS 536
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCK------------------ 161
+ D++ + ++ M G + + L+ LCK
Sbjct: 537 ILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKG 596
Query: 162 ----------------RQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLC-DMGKLVEA 204
R+ + AL L+ +M E G L ++F LC G + EA
Sbjct: 597 MRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEA 656
Query: 205 EKSFLEMIEKGHKPSQVSFR 224
LEM++KG P SFR
Sbjct: 657 FDFMLEMVDKGFIPEFSSFR 676
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 116/249 (46%), Gaps = 2/249 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G++ D V YN L++V + +++ + +M I PDV+++ +++ L Q A
Sbjct: 141 GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTA 200
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+L+EM G PD + ++ + + A + M+E G S T N+
Sbjct: 201 VLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLING 260
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
+ + + + + G P+ + F+ LC+ + V AL++ + MV++G
Sbjct: 261 YCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQ-NDHVGHALKVMDVMVQEGHDP 319
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLS 243
+ +++ + LC G+L EA+ +M+++G P +F + A + N+ E +L+
Sbjct: 320 DVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLA 379
Query: 244 NKMALFGPS 252
++ + G S
Sbjct: 380 RQVTVKGVS 388
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/150 (20%), Positives = 69/150 (46%)
Query: 74 YGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRS 133
+G D YN + +++ + EM +G+ P+ T+N + ++ +R+
Sbjct: 140 FGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRT 199
Query: 134 SWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFD 193
+ + M G P+ + L++ + +E AL++ M+E G + + +VL +
Sbjct: 200 AVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLIN 259
Query: 194 LLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
C +G++ +A + I G +P Q+++
Sbjct: 260 GYCKLGRVEDALGYIQQEIADGFEPDQITY 289
>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
Length = 742
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 108/222 (48%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G +PD ++YN ++ C++ V A K+++ M E PDV +Y ++ L GQ ++A
Sbjct: 281 GFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEA 340
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ +L +M + GC PD +N I C RL +A L ++ KG+SP+ T+N+
Sbjct: 341 KGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINA 400
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
D + L+ M +GC P+ + L+ K+ AL L DM G
Sbjct: 401 LCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRS 460
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + + D LC ++ EAE+ F +M +G + ++F +
Sbjct: 461 TITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTL 502
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 121/248 (48%), Gaps = 4/248 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV PD+ ++N LI+ CK A ++ E+M++ +PD ++Y ++I L +G+ KA
Sbjct: 386 GVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKA 445
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
D+LK+M+ GC YN I C R+ +A + D+M +G+S NA T+N
Sbjct: 446 LDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDG 505
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
+ ++ L +M+ G PN + L CK Q ++ A + M GF
Sbjct: 506 LCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCK-QGDIKKAADILETMTANGFEV 564
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI-KALMELANKQEALQNL 242
++ L + LC G+ A K M KG +P+ ++ + ++L N ++AL +L
Sbjct: 565 DVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDAL-SL 623
Query: 243 SNKMALFG 250
+MA G
Sbjct: 624 FREMAEVG 631
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 110/261 (42%), Gaps = 35/261 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+KPD+V++N L+ C+ QV A ++E+M ++PD ++T+++ G G
Sbjct: 172 MGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGS 231
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASG------------------- 101
+ A V M E GC N I YC R+ DA G
Sbjct: 232 IEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNT 291
Query: 102 ----------------LMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
+MD MV++G P+ TYN+ + L + + +M+ G
Sbjct: 292 FVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRG 351
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
CLP+ + L+ ++E AL L + KG + ++L + LC +G A
Sbjct: 352 CLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLAL 411
Query: 206 KSFLEMIEKGHKPSQVSFRRI 226
+ F EM G P +V++ +
Sbjct: 412 RLFEEMKNSGCTPDEVTYNTL 432
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 108/227 (47%), Gaps = 2/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M EMG V+ N LI+ YCK +VE A +++ + PD I+Y + + GL
Sbjct: 242 MLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDH 301
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A V+ M + G PD YN + C +L +A G++++MV++G P+ TT+N
Sbjct: 302 VGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNT 361
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
N L + +L ++ G P+ + L+ LCK + +AL+L+ +M
Sbjct: 362 LIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDP-HLALRLFEEMKNS 420
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G + + L D LC +GKL +A +M G S +++ I
Sbjct: 421 GCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTI 467
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 112/227 (49%), Gaps = 2/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G PD+ +YN +++ CK+ Q+E+A I+ +M D PD+ ++ ++I L +
Sbjct: 312 MVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNR 371
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A D+ +++ G PD +N I C A L +EM G +P+ TYN
Sbjct: 372 LEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNT 431
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
L + +L M TGC +T + ++ LCK+ ++E A ++++ M +
Sbjct: 432 LIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKM-RIEEAEEVFDQMDLQ 490
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G + + L D LC K+ +A +MI +G +P+ +++ I
Sbjct: 491 GISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSI 537
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 112/260 (43%), Gaps = 36/260 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G PD V+YN LID C ++ KA +++ M I+Y +II GL +
Sbjct: 417 MKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMR 476
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A +V +M G +A +N I C K++ DA GL+++M+ +GL PN TYN
Sbjct: 477 IEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNS 536
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCK------------------ 161
+ D++ + ++ M G + + L+ LCK
Sbjct: 537 ILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKG 596
Query: 162 ----------------RQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLC-DMGKLVEA 204
R+ + AL L+ +M E G L ++F LC G + EA
Sbjct: 597 MRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEA 656
Query: 205 EKSFLEMIEKGHKPSQVSFR 224
LEM++KG P SFR
Sbjct: 657 FDFMLEMVDKGFIPEFSSFR 676
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 78/155 (50%), Gaps = 1/155 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G++P+ ++YN ++ YCK ++KA I+E M DV++Y ++I GL G+ A
Sbjct: 526 GLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVA 585
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
VL+ M+ G P AYN +++ +RDA L EM E G P+A TY + FR
Sbjct: 586 LKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRG 645
Query: 125 F-YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK 158
++ +++ M+ G +P S L +
Sbjct: 646 LCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAE 680
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 116/249 (46%), Gaps = 2/249 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G++ D V YN L++V + +++ + +M I PDV+++ +++ L Q A
Sbjct: 141 GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTA 200
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+L+EM G PD + ++ + + A + M+E G S T N+
Sbjct: 201 VLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLING 260
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
+ + + + + G P+ + F+ LC+ + V AL++ + MV++G
Sbjct: 261 YCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQ-NDHVGHALKVMDVMVQEGHDP 319
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLS 243
+ +++ + LC G+L EA+ +M+++G P +F + A + N+ E +L+
Sbjct: 320 DVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLA 379
Query: 244 NKMALFGPS 252
++ + G S
Sbjct: 380 RQVTVKGVS 388
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/150 (20%), Positives = 69/150 (46%)
Query: 74 YGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRS 133
+G D YN + +++ + EM +G+ P+ T+N + ++ +R+
Sbjct: 140 FGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRT 199
Query: 134 SWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFD 193
+ + M G P+ + L++ + +E AL++ M+E G + + +VL +
Sbjct: 200 AVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLIN 259
Query: 194 LLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
C +G++ +A + I G +P Q+++
Sbjct: 260 GYCKLGRVEDALGYIQQEIADGFEPDQITY 289
>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
Length = 814
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 110/225 (48%), Gaps = 3/225 (1%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
+G PD V+Y L CK +V++A K++E+ + DV++YT++ GL GQ D+
Sbjct: 572 VGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDR 631
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
A + +EM G PDAAAY I K+L DA DEM+ KG P TY +
Sbjct: 632 AVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQ 691
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSC--MFLVKLCKRQEKVEIALQLWNDMVEKGF 181
+ ++ +++ + M+ G L + + CK KV+ AL+L+ DM+ +G
Sbjct: 692 ALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKAL-KVDAALKLFEDMISRGN 750
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ S LFD L GK +A++ EM G P +F I
Sbjct: 751 VPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAI 795
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 113/227 (49%), Gaps = 1/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDED-ISPDVISYTSIIGGLGLVG 59
M+ KPD+ ++ L+D CK EKA+++ +M + PD +T+++ L
Sbjct: 180 MKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAK 239
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ +AR+V +M++ G PDA AYN I A ++A ++D M+ K P TY
Sbjct: 240 RVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYG 299
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ + L + L+ M +G PN+ L+ + +++ A L+++MVE
Sbjct: 300 ILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEA 359
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G+ ++ V+ D LC G +A KSF EM+ G KP+ V++ I
Sbjct: 360 GYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTI 406
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 115/250 (46%), Gaps = 5/250 (2%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQ--VEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
G KPD +YN LI+ C+ R+ VE+A+ ++ + PD ++YT + GL +G+ D
Sbjct: 536 GCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVD 595
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
+A +L+E G D AY A C ++ A L EMV +G +P+A Y
Sbjct: 596 RAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCII 655
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG-- 180
L + + M+G G P + LV+ V+ A + M+ +G
Sbjct: 656 NGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGEL 715
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
GS +++ D L C K+ A K F +MI +G+ P+ V+ + + + K E Q
Sbjct: 716 VGS-VMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQ 774
Query: 241 NLSNKMALFG 250
L +MA G
Sbjct: 775 ELLQEMAAGG 784
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 118/261 (45%), Gaps = 38/261 (14%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G +PD++++ +ID CK E+A K E+M P+V++YT+II GL +G+
Sbjct: 356 MVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGR 415
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A ++K M +GC+PD+ Y + +C RL +A+ L+DE+ + SPN Y+
Sbjct: 416 VANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSS 475
Query: 121 FFR--------------VFYWS----------------------NDLRSSWNLYCRMMGT 144
+ +F S L + ++ RM+
Sbjct: 476 LVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSE 535
Query: 145 GCLPNTQSCMFLVK-LCK-RQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLV 202
GC P+ + L+ LC+ R+ +VE A L +D+ G+ + L LC +G++
Sbjct: 536 GCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVD 595
Query: 203 EAEKSFLEMIEKGHKPSQVSF 223
A K E +G V++
Sbjct: 596 RAVKMLEEASSRGWNADVVAY 616
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 113/243 (46%), Gaps = 1/243 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G PD ++YN +ID K ++A K+++ M + P ++Y ++ L G
Sbjct: 251 MEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGT 310
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A ++ + M G P++ Y + I + + R+++A L DEMVE G P+ T+ +
Sbjct: 311 LERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTV 370
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
S + + + MM GC PN + +++ + +V A ++ M+ G
Sbjct: 371 MIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHG 430
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS-QVSFRRIKALMELANKQEAL 239
+ L D C +G+L EA + E+ + P+ Q+ +K L + + + L
Sbjct: 431 CFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTL 490
Query: 240 QNL 242
+L
Sbjct: 491 DDL 493
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 66/153 (43%), Gaps = 1/153 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD +Y C+I+ K +++E A K ++M + P V +YT+++ L G
Sbjct: 639 MVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGN 698
Query: 61 PDKARDVLKEMKEYG-CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
D+A + M G Y+A I +C A ++ A L ++M+ +G P A T
Sbjct: 699 VDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSA 758
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS 152
F S + L M G P+ +
Sbjct: 759 SLFDGLVRSGKTEKAQELLQEMAAGGSPPHAAT 791
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 4/100 (4%)
Query: 10 IVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLK 69
++ Y+ LI +CK +V+ A K+ E M P ++ S+ GL G+ +KA+++L+
Sbjct: 719 VMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQ 778
Query: 70 EMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEK 109
EM G P AA + A + R D SG + ++V++
Sbjct: 779 EMAAGGSPPHAATFTAILDGL----RKSDESGKLLKLVQE 814
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 100/243 (41%), Gaps = 19/243 (7%)
Query: 24 RQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLV-GQ--PDKARDVLKEMK-------- 72
R+ + IVE ++D + S +I LG V GQ VL+ +K
Sbjct: 46 RRADLVTSIVETIKDVRLDGSSWSVHNIRNVLGPVHGQVLGSHVAAVLRSLKVTGTAISF 105
Query: 73 ------EYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
+ G D YN + K + +EM++ G++PN ++N+ R F
Sbjct: 106 FRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFA 165
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF-GSYI 185
+ + + M C P+ + + LV + E A +++++M+ GF
Sbjct: 166 RTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDR 225
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLSN 244
+ + L ++ EA + F +M + G P +++ I L + + QEAL+ L N
Sbjct: 226 ALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDN 285
Query: 245 KMA 247
+A
Sbjct: 286 MLA 288
>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 624
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 116/223 (52%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +M +K IV++N +I++ C++ + +KA + M + P+V++Y ++I G L G+
Sbjct: 208 MVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGK 267
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A + K MK+ PD YN+ I C +R+ +ASG++ +++E GL PNA TYN
Sbjct: 268 FEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNA 327
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
DL ++ MM G + + + L+ ++++E A + +M EKG
Sbjct: 328 LIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKG 387
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ ++ + C G +A F EM+EK +P+ ++
Sbjct: 388 VEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETY 430
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 109/223 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GVKP++V+YN +I+ YC + E A KI + M+D+++ PD +Y S I L +
Sbjct: 243 MEVYGVKPNVVTYNTVINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERR 302
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A VL ++ E G P+A YNA I C L A DEM+ +G+ + TYNL
Sbjct: 303 IEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNL 362
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + ++ M G P+ + + R + AL L+++MVEK
Sbjct: 363 LIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKN 422
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ L D+ ++ EAE+ F + I++G P + F
Sbjct: 423 IRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMF 465
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 111/223 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MRE GV+PD+V+YN I+ YC+ +KA + ++M +++I P V +YTS+I G +
Sbjct: 383 MREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNR 442
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + K+ + G PD +NA I +C+ + A L+ EM + P+ T+N
Sbjct: 443 MSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNT 502
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + + L M G P+ S L+ ++ ++ AL+++++M+ G
Sbjct: 503 LMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLG 562
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
F +L + L +G+ AE+ EM KG P ++
Sbjct: 563 FDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTY 605
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 110/226 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ +KPD +YN I CK+R++E+A ++ K+ + + P+ ++Y ++I G G
Sbjct: 278 MKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGD 337
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA EM G YN I + KR+ +A ++ EM EKG+ P+ TYN+
Sbjct: 338 LDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNI 397
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + + +L+ M+ P ++ L+ + ++ ++ A + + +++G
Sbjct: 398 QINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEG 457
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
I++ + L D C G + A + EM P +V+F +
Sbjct: 458 MLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTL 503
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 104/215 (48%), Gaps = 1/215 (0%)
Query: 26 VEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNA 85
++ A+ + E+M +I ++++ +I L G+ KA+D + M+ YG P+ YN
Sbjct: 198 IKMAWFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNT 257
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
I YC+ + AS + M +K L P+ TYN F + + + C+++ +G
Sbjct: 258 VINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESG 317
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
+PN + L+ C + ++ A ++M+ +G + + ++L L ++ EAE
Sbjct: 318 LVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAE 377
Query: 206 KSFLEMIEKGHKPSQVSFR-RIKALMELANKQEAL 239
EM EKG +P V++ +I N ++AL
Sbjct: 378 DMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKAL 412
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 86/160 (53%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ PDI+ +N LID +C + +++A++++++M + + PD +++ +++ G + ++A
Sbjct: 457 GMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEA 516
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ +L EMKE G PD +YN I Y ++DA + DEM+ G P TYN +
Sbjct: 517 KKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQG 576
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQE 164
+ + + L M G P+ + +++++ K +
Sbjct: 577 YSKIGEADHAEELLREMQSKGITPDDSTYLYVIEAMKTND 616
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 70/131 (53%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M V PD V++N L+ YC++R+VE+A K++++M++ I PD ISY ++I G G
Sbjct: 488 MDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGD 547
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +V EM G P YNA I+ Y A L+ EM KG++P+ +TY
Sbjct: 548 MKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLY 607
Query: 121 FFRVFYWSNDL 131
++DL
Sbjct: 608 VIEAMKTNDDL 618
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 105/223 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ + +YN LI ++++E+A ++++MR++ + PDV++Y I G G
Sbjct: 348 MMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGN 407
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA + EM E P Y + I + R+ +A + +++G+ P+ +N
Sbjct: 408 AKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNA 467
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ ++ L M +P+ + L++ R+ KVE A +L ++M E+G
Sbjct: 468 LIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERG 527
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + L G + +A + F EM+ G P+ +++
Sbjct: 528 IKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTY 570
>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 117/223 (52%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++G++P+ V+++ L++ ++ A K+ ++M PDVI+Y++II GL +G
Sbjct: 38 MFKLGLQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGS 97
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +LK+M+E GC P+ Y+ I + C K + +A + EMV +G+SPN TY+
Sbjct: 98 TTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSS 157
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + +L+ +M+ +P+T + LV ++ + A ++ M+EKG
Sbjct: 158 ILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKG 217
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + L D C ++ EA+K F M+ KG PS S+
Sbjct: 218 VEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSY 260
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 112/223 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G KP++V Y+ +ID CKD+ + +A + + +M + ISP+V++Y+SI+ G +G+
Sbjct: 108 MEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGR 167
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A + K+M E PD +N + + +A + + M+EKG+ PN TYN
Sbjct: 168 SNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNA 227
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + + L+ M+ GC P+ +S L+K + +++ A L +M K
Sbjct: 228 LMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKA 287
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ L C G+ +A+K EM G P +++
Sbjct: 288 LTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTY 330
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 124/252 (49%), Gaps = 4/252 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E V PD V++N L+D K+ + +A + E M ++ + P+V +Y +++ G Q
Sbjct: 178 MVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQ 237
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A+ + M GC P +YN I+ +C + R+ +A GL+ EM K L+P+ TY+
Sbjct: 238 MDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYST 297
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ F + + L M G LP+ + + L LCK Q ++ A +L M E
Sbjct: 298 LMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCK-QGHLDEAFELLKAMQES 356
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEA 238
I + +L +C+ GKL A + F + KG +P V++ I L++ EA
Sbjct: 357 KIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEA 416
Query: 239 LQNLSNKMALFG 250
+ L MA+ G
Sbjct: 417 CE-LFRDMAVHG 427
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 109/226 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E GV+P++ +YN L+D YC Q+++A K+ M + +P V SY +I G G+
Sbjct: 213 MIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGR 272
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A+ +L EM PD Y+ ++ +C R +DA L++EM GL P+ TY++
Sbjct: 273 IDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSI 332
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
L ++ L M + PN L++ K+E A +L++++ KG
Sbjct: 333 VLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKG 392
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ V+ L G EA + F +M G P+ ++ I
Sbjct: 393 IQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVI 438
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 102/217 (47%), Gaps = 4/217 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + PD V+Y+ L+ +C+D + + A K++E+MR + PD+++Y+ ++ GL G
Sbjct: 283 MSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGH 342
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A ++LK M+E P+ Y I+ C +L A L + KG+ P+ TY +
Sbjct: 343 LDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTV 402
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L+ M GCLPN+ + +++ R A +L +MV +G
Sbjct: 403 MISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRG 462
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHK 217
F + F +L D+ E F+ +G K
Sbjct: 463 FSA----DSSTFQMLSDLESRDEIISLFMHGSSQGRK 495
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 98/229 (42%), Gaps = 7/229 (3%)
Query: 6 VKPDIVSYNCLIDVYCKDRQ--VEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
++PD+ + LI+ +C A+ ++ M + P+ +++++++ GL +
Sbjct: 6 IRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIID 65
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
A + EM + G PD Y+ I C A L+ +M EKG PN Y+
Sbjct: 66 AVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIID 125
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
+ + M+ G PN + L C E A L+ MVE+
Sbjct: 126 SLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNE-ATSLFKQMVERNVM 184
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALME 231
+ ++L D L G ++EA+ F MIEKG +P+ ++ ALM+
Sbjct: 185 PDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYN---ALMD 230
>gi|255565671|ref|XP_002523825.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536913|gb|EEF38551.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 528
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 113/227 (49%), Gaps = 1/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G P++ +Y +ID C+ Q+ +A+ + +M D P+ I++ +++ G+
Sbjct: 272 MKVAGCMPNVYTYTIVIDALCRCGQITRAHDVFAEMLDVGCEPNSITFNNLLRVHVKAGR 331
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+K V +MK GC PD YN I ++C L +A +++ MV+KG SPNA+T+N
Sbjct: 332 TEKVLQVYNQMKRMGCPPDTVTYNFLIESHCKDGNLDEALKVLNSMVKKGCSPNASTFNG 391
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F D+ + LY +M C NT + L+++ + ++ L+L +M E
Sbjct: 392 LFGSIAKLRDVNGAHRLYAKMKELKCKANTVTYNILMRMFVDTKSTDMVLKLKKEMDEDD 451
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMI-EKGHKPSQVSFRRI 226
+ VL + C MG A K F EM+ EK KPS + ++
Sbjct: 452 VEPNVNTYCVLIAMYCGMGHWNNAYKFFREMVEEKCLKPSLPVYEKV 498
Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 109/223 (48%), Gaps = 1/223 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + KPD ++++ LI + C+ R+ +A + ++D+ PDVI YT+++ G G
Sbjct: 203 MEDYNCKPDKIAFSILISILCRKRRATEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGN 261
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A V EMK GC P+ Y I C ++ A + EM++ G PN+ T+N
Sbjct: 262 IPEAERVFTEMKVAGCMPNVYTYTIVIDALCRCGQITRAHDVFAEMLDVGCEPNSITFNN 321
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
RV + +Y +M GC P+T + FL++ + ++ AL++ N MV+KG
Sbjct: 322 LLRVHVKAGRTEKVLQVYNQMKRMGCPPDTVTYNFLIESHCKDGNLDEALKVLNSMVKKG 381
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ LF + + + A + + +M E K + V++
Sbjct: 382 CSPNASTFNGLFGSIAKLRDVNGAHRLYAKMKELKCKANTVTY 424
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 100/223 (44%), Gaps = 1/223 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ V+ I +++ LI Y + +A +M D + PD I+++ +I L +
Sbjct: 168 MKARNVEISIETFSILIRRYVRAGLASEAVHAFNRMEDYNCKPDKIAFSILISILCRKRR 227
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A+ +K+ PD Y +R +C A + +A + EM G PN TY +
Sbjct: 228 ATEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNIPEAERVFTEMKVAGCMPNVYTYTI 286
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + +++ M+ GC PN+ + L+++ + + E LQ++N M G
Sbjct: 287 VIDALCRCGQITRAHDVFAEMLDVGCEPNSITFNNLLRVHVKAGRTEKVLQVYNQMKRMG 346
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + L + C G L EA K M++KG P+ +F
Sbjct: 347 CPPDTVTYNFLIESHCKDGNLDEALKVLNSMVKKGCSPNASTF 389
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/238 (19%), Positives = 97/238 (40%), Gaps = 36/238 (15%)
Query: 13 YNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMK 72
YN +ID+ K R + +++++ M+ ++ + +++ +I G +A M+
Sbjct: 145 YNEMIDLAGKVRNFDLGWQVIDLMKARNVEISIETFSILIRRYVRAGLASEAVHAFNRME 204
Query: 73 EYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLR 132
+Y C PD A++ I C +R +A D + +K P+ Y R + + ++
Sbjct: 205 DYNCKPDKIAFSILISILCRKRRATEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIP 263
Query: 133 SSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLF 192
+ ++ M GC+PN + ++
Sbjct: 264 EAERVFTEMKVAGCMPN-----------------------------------VYTYTIVI 288
Query: 193 DLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFG 250
D LC G++ A F EM++ G +P+ ++F + + A + E + + N+M G
Sbjct: 289 DALCRCGQITRAHDVFAEMLDVGCEPNSITFNNLLRVHVKAGRTEKVLQVYNQMKRMG 346
>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
Length = 600
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 120/251 (47%), Gaps = 1/251 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MRE G +P + + L+ Y + E+AY+++ +M +PDVI YTS+I L G+
Sbjct: 274 MRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGR 333
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR V M E GC PDA Y I+N+ + A +++ M + G+ P+ YN
Sbjct: 334 VPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNS 393
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + ++ +Y RM+ +G PN + L+ + K + A L+ +M+EK
Sbjct: 394 LMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKE 453
Query: 181 FGSYILVS-DVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
LVS +L D L G++ EA F EMI++G P ++ + + A +
Sbjct: 454 EVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEA 513
Query: 240 QNLSNKMALFG 250
+ L M G
Sbjct: 514 KKLVEDMVKLG 524
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 102/226 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
++ G P++V+Y +ID K ++E K E+M P +YT +I GL
Sbjct: 134 LKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGLCKAQM 193
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A V ++M + GC PD Y I + A ++ +A L+D M+ KG P A TY
Sbjct: 194 LPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGS 253
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + + + + +M GC P L+ + + E A Q+ +M +G
Sbjct: 254 IVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARG 313
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+++ L DLL G++ EA F MIEKG P +++ I
Sbjct: 314 CAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTI 359
Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 110/223 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G PD ++Y LID + K ++++A K+++ M + P ++Y SI+ G +
Sbjct: 204 MVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDM 263
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A++V+ +M+E GC P + + + Y R +A ++ EM +G +P+ Y
Sbjct: 264 INEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTS 323
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + + + +++ M+ GC P+ + +++ + VE A ++ M + G
Sbjct: 324 LIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSG 383
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G + L D + ++ +A + M+ G KP+ V+F
Sbjct: 384 VGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTF 426
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 124/288 (43%), Gaps = 40/288 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD++ Y LID+ +V +A + + M ++ +PD ++Y +II +G
Sbjct: 309 MTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGN 368
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A ++L+ M + G PD AYN+ + Y +R+ A G+ D MV G+ PNA T+N+
Sbjct: 369 VEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNV 428
Query: 121 FFRVFYWSNDLRSSWNLYCRMM------------------------------------GT 144
+ +++L+ M+
Sbjct: 429 LMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDR 488
Query: 145 GCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEA 204
G +P + L+ + ++ A +L DMV+ G + L L D + A
Sbjct: 489 GIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTA 548
Query: 205 EKSFLEMIEKGHKPSQVSFRRIKALMELANKQ---EAL-QNLSNKMAL 248
F EM+++G P++V+++ ++ A + EA+ Q+ S +A+
Sbjct: 549 WDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRALDLEAVKQHFSQGVAM 596
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 112/242 (46%), Gaps = 4/242 (1%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
+PD+ Y +I YCK ++ Y + S DVISYT++I GL + D+A +
Sbjct: 73 RPDVFLYTSVIHGYCKAGDLDTGYF---RAVTPKASLDVISYTTVIKGLADSKRIDEACE 129
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
+ +E+K GC P+ AY A I A R+ D +EM P TTY +
Sbjct: 130 LFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGLC 189
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+ L + ++ +M+ GC+P+T + L+ + K++ A +L + M+ KG +
Sbjct: 190 KAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAV 249
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKA-LMELANKQEALQNLSNK 245
+ C + + EA++ +M E+G +P F + + + +EA Q L+
Sbjct: 250 TYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEM 309
Query: 246 MA 247
A
Sbjct: 310 TA 311
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 108/224 (48%), Gaps = 1/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G +P V+Y ++ +CK + +A +++ +MR+ P + +TS++ G+
Sbjct: 239 MLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGR 298
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A VL EM GC PD Y + I R+ +A + D M+EKG +P+A TY
Sbjct: 299 AEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGT 358
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ F ++ ++ + M +G P+ + L+ + E+V+ A +++ MV G
Sbjct: 359 IIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASG 418
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGH-KPSQVSF 223
+ +VL L GK A F EM+EK P+ VS+
Sbjct: 419 IKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSY 462
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 107/257 (41%), Gaps = 37/257 (14%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
MG +P IVSYN +I ++++AYK M D PDVI++T++I G GQP
Sbjct: 1 MGCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQV 60
Query: 64 ARDVLKE-MKEYGCYPDAAAYNAAIRNYCIA----------------------------- 93
+L + +K + PD Y + I YC A
Sbjct: 61 GHKLLNQALKRF--RPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGL 118
Query: 94 ---KRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPN- 149
KR+ +A L +E+ G SPN Y + + + M G+ C+P
Sbjct: 119 ADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTR 178
Query: 150 TQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFL 209
T + + LCK Q + A +++ MV+KG + L D K+ EA K
Sbjct: 179 TTYTVVIDGLCKAQ-MLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLD 237
Query: 210 EMIEKGHKPSQVSFRRI 226
M+ KG +P+ V++ I
Sbjct: 238 VMLTKGPEPTAVTYGSI 254
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 90/207 (43%), Gaps = 1/207 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P +Y +ID CK + + A K+ E+M + PD I+YT++I G + D+AR +
Sbjct: 176 PTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKL 235
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L M G P A Y + + +C + +A ++ +M E+G P + +
Sbjct: 236 LDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLS 295
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
++ + M GC P+ L+ L +V A +++ M+EKG L
Sbjct: 296 KGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALT 355
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEK 214
+ +G VEA LE++ K
Sbjct: 356 YGTIIQNFSKIGN-VEAAGEILELMAK 381
>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
Length = 455
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 107/219 (48%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ PD+ +YN LI+ +CK+ V+KA +I E M + V++YTS+I L GQ +
Sbjct: 209 GLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQET 268
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ E G PD YNA I ++ + + A +M EM +K ++P+ TYN R
Sbjct: 269 DKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRG 328
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + L M G P+ + L+ + V+ AL++ N+M+ KGF
Sbjct: 329 LCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPT 388
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+L + L LC G+ +AE EM+E G P ++
Sbjct: 389 LLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTY 427
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 114/225 (50%), Gaps = 3/225 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDE-DISPDVISYTSIIGGLGLVG 59
+R+M +P+ V+YN +I +C +V+ A I+ +MR+ I+P+ +Y ++I G VG
Sbjct: 64 LRQM-PRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVG 122
Query: 60 QPDKARDVLKEMKEYG-CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
+ D+A V EM G P+A YNA I YC +L A D MVE+G++ TY
Sbjct: 123 RVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATY 182
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
NL + ++ L M G G P+ + L+ ++ V+ AL+++ +M
Sbjct: 183 NLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSR 242
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+G + ++ L L G++ E +K F E + +G +P V +
Sbjct: 243 RGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLY 287
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 88/154 (57%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G++PD+V YN LI+ + +++A++I+ +M + I+PD ++Y +++ GL L+G+ D+A
Sbjct: 279 GIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEA 338
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
R ++ EM + G PD YN I Y + ++DA + +EM+ KG +P TYN +
Sbjct: 339 RKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQG 398
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK 158
+ + N+ M+ G P+ + + L++
Sbjct: 399 LCKNGQGDDAENMVKEMVENGITPDDSTYISLIE 432
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 120/255 (47%), Gaps = 5/255 (1%)
Query: 1 MREM----GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDE-DISPDVISYTSIIGGL 55
MREM G+ P+ +Y +I +CK +V++A K+ ++M + ++ P+ + Y ++IGG
Sbjct: 95 MREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGY 154
Query: 56 GLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNA 115
G+ D A M E G A YN + + R +A L++EM KGL+P+
Sbjct: 155 CDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDV 214
Query: 116 TTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWND 175
TYN+ +++ + ++ M G + L+ ++ +V+ +L+++
Sbjct: 215 FTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDE 274
Query: 176 MVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANK 235
V +G +++ + L + G + A + EM +K P V++ + + L +
Sbjct: 275 AVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGR 334
Query: 236 QEALQNLSNKMALFG 250
+ + L ++M G
Sbjct: 335 VDEARKLIDEMTKRG 349
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 53/87 (60%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G++PD+V+YN LI Y V+ A +I +M ++ +P +++Y ++I GL GQ
Sbjct: 345 MTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQ 404
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAI 87
D A +++KEM E G PD + Y + I
Sbjct: 405 GDDAENMVKEMVENGITPDDSTYISLI 431
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 89/190 (46%), Gaps = 9/190 (4%)
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEK-GLSPNATT 117
G+P +A ++L++M P+A YN I +C R++ A +M EM E+ G++PN T
Sbjct: 55 GKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYT 110
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMF--LVKLCKRQEKVEIALQLWND 175
Y + + + ++ M+ G + ++ M+ L+ Q K++ AL +
Sbjct: 111 YGTVISGWCKVGRVDEAVKVFDEMLTKGEV-KPEAVMYNALIGGYCDQGKLDTALLYRDR 169
Query: 176 MVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELAN 234
MVE+G + ++L L G+ EA + EM KG P ++ I + N
Sbjct: 170 MVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGN 229
Query: 235 KQEALQNLSN 244
++AL+ N
Sbjct: 230 VKKALEIFEN 239
Score = 43.9 bits (102), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 33/55 (60%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGL 55
M G P +++YN LI CK+ Q + A +V++M + I+PD +Y S+I GL
Sbjct: 380 MMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 434
>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
Length = 748
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 107/201 (53%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD V+Y L+D YCK R++ +A++++ +M D ++ P V+++ ++ G + G
Sbjct: 524 MEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGM 583
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ +LK M E G P+A YN+ I+ YCI +R + + M KG+ P+ TYN+
Sbjct: 584 LEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNI 643
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + +++ +W L+ M+G G S L+K +++K A +L+ M +G
Sbjct: 644 LIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREG 703
Query: 181 FGSYILVSDVLFDLLCDMGKL 201
+ + ++ D+ D GK+
Sbjct: 704 LVADREIYNIFADINYDEGKM 724
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 117/250 (46%), Gaps = 35/250 (14%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +MG+ P+IV+Y L D CK +V+ A +++ +M + + ++ +Y S++ GL G
Sbjct: 454 MLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGN 513
Query: 61 PDKARDVLKEMKEYGCYPDAAAY-----------------------------------NA 85
D+A ++K+M+ G +PDA Y N
Sbjct: 514 IDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNV 573
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
+ +C++ L D L+ M+EKG+ PNATTYN + + N++R++ +Y M G
Sbjct: 574 LMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKG 633
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
+P+ + L+K + ++ A L DMV KGF + + L K +EA
Sbjct: 634 VVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEAR 693
Query: 206 KSFLEMIEKG 215
+ F +M +G
Sbjct: 694 ELFEQMRREG 703
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 112/224 (50%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G+KP+ +YN +I + CK +V +A +++ +M E I+PD + YT++I G +G
Sbjct: 314 MQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGN 373
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A + EM++ PD Y A I C R+ +A L EMV K L P+ TY
Sbjct: 374 VSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTA 433
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+ ++ +++L+ +M+ G PN + L LCK E V+ A +L ++M K
Sbjct: 434 LIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGE-VDTANELLHEMCRK 492
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G I + L + LC G + +A K +M G P V++
Sbjct: 493 GLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTY 536
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 112/222 (50%), Gaps = 2/222 (0%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E+GV + SYN + C+ +V +A++++ +M PDVISY+++I G VG+
Sbjct: 246 EVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQ 305
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
+ +++EM+ G P+ YN I C ++ +A ++ EM+ +G++P+ Y
Sbjct: 306 RVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLI 365
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEKGF 181
F ++ S++ L+ M P+ + ++ LC+ +E A +L+++MV K
Sbjct: 366 DGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVME-ADKLFHEMVCKRL 424
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ L D C GK+ EA +M++ G P+ V++
Sbjct: 425 EPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTY 466
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 117/261 (44%), Gaps = 4/261 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ + PD ++Y +I C+ +V +A K+ +M + + PD ++YT++I G G+
Sbjct: 384 MQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGK 443
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + +M + G P+ Y A C + A+ L+ EM KGL N TYN
Sbjct: 444 MKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNS 503
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEK 179
+ ++ + L M G P+ + L+ CK +E V A +L M+++
Sbjct: 504 LVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVR-AHELLRQMLDR 562
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
++ +VL + C G L + EK M+EKG P+ ++ + + N A
Sbjct: 563 ELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRAT 622
Query: 240 QNLSNKMALFGPSMIPKREEY 260
+ M G ++P Y
Sbjct: 623 TEIYRGMCAKG--VVPDGNTY 641
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 109/238 (45%), Gaps = 4/238 (1%)
Query: 26 VEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNA 85
++ A K+ + + + + SY I L +G+ +A +L +M+ GC PD +Y+
Sbjct: 234 IKIALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYST 293
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
I YC L+ L++EM KGL PN TYN + + + + + M+ G
Sbjct: 294 VINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEG 353
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
P+ L+ + V A +L+++M ++ + + LC G+++EA+
Sbjct: 354 IAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEAD 413
Query: 206 KSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLSNKMALFGPSMIPKREEYLA 262
K F EM+ K +P +V++ I + +EA +L N+M G + P Y A
Sbjct: 414 KLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAF-SLHNQMLQMG--LTPNIVTYTA 468
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 62/119 (52%), Gaps = 1/119 (0%)
Query: 109 KGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSC-MFLVKLCKRQEKVE 167
K + +++FF+V + L + L+ +M+ G L + SC +F+ L + + ++
Sbjct: 176 KDWGSDPRVFDIFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIK 235
Query: 168 IALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
IAL+++ + E G +++ LC +G++VEA + L+M +G P +S+ +
Sbjct: 236 IALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTV 294
>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Vitis vinifera]
Length = 686
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 113/224 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + +P++++YN +ID CKDRQV +A+ + +M + ISPD+ +Y S+I L + +
Sbjct: 281 MVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCE 340
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+L EM P+ ++ + C + A ++D M+++G+ P+ TY
Sbjct: 341 WKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTA 400
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+++ + ++ M+ GC+PN +S L+ + ++++ A+ L M +G
Sbjct: 401 LMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQG 460
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
+ + + L LC +G+L A F EM+ G P V++R
Sbjct: 461 LIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYR 504
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 118/237 (49%), Gaps = 8/237 (3%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ P++V ++ ++D CK+ + A+ +V+ M + PDV++YT+++ G L + D+A
Sbjct: 356 IMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAV 415
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
V M GC P+ +YN I YC +R+ A GL+++M +GL + TYN
Sbjct: 416 KVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGL 475
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSY 184
L+ + L+ M+ +G +P+ + L+ LCK E A+ L + +
Sbjct: 476 CHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAE-AMVLLKAIEGSNLDAD 534
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI------KALMELANK 235
ILV ++ D +C G+L A F + KG +P ++ + + L++ ANK
Sbjct: 535 ILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANK 591
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 109/221 (49%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
++G +PD ++N LI C + ++ +A + +K E PDV++Y +++ GL VG
Sbjct: 213 KLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTS 272
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
A +L+ M + C P+ AYN I + C +++ +A L EM+ KG+SP+ TYN
Sbjct: 273 AAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLI 332
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
+ + L M+ + +PN +V ++ + IA + + M+++G
Sbjct: 333 HALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVE 392
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ L D C ++ EA K F M+ KG P+ S+
Sbjct: 393 PDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSY 433
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 102/215 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV+PD+V+Y L+D +C ++++A K+ + M + P+V SY +I G + +
Sbjct: 386 MIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQR 445
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA +L++M G D YN I C RL+ A L EMV G P+ TY +
Sbjct: 446 MDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRI 505
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++ L + L + G+ + + R ++E A L++++ KG
Sbjct: 506 LLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKG 565
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
+ +++ LC G L EA K F +M E G
Sbjct: 566 LQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENG 600
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 94/227 (41%), Gaps = 2/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M M P V + L+ K + + +M I PDV + +I + +
Sbjct: 141 MLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRR 200
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A VL ++ + GC PD +N IR C+ ++ +A L D+ + +G P+ TY
Sbjct: 201 LGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGT 260
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEK 179
+ ++ L M+ C PN + ++ LCK ++ E A L+++M+ K
Sbjct: 261 LMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTE-AFNLFSEMITK 319
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G I + L LC++ + EM+ P+ V F +
Sbjct: 320 GISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTV 366
>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 577
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 123/251 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E + P++V++N LID + K+ ++ +A K+ ++M I PD+ +Y+S+I G + +
Sbjct: 321 MIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 380
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A+ + + M C+P+ YN I +C AKR+ + L EM ++GL N TY
Sbjct: 381 LDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTT 440
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F+ + D ++ ++ +M+ G PN + L+ + K+E A+ ++ +
Sbjct: 441 LIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 500
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
I +++ + +C GK+ + F + KG KP + + + + +E
Sbjct: 501 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEAD 560
Query: 241 NLSNKMALFGP 251
L KM GP
Sbjct: 561 ALFRKMREDGP 571
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 106/223 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++G +P IV+ + L++ YC +++ A +V++M + PD I++T++I GL L +
Sbjct: 146 MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 205
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++ M + GC P+ Y + C + A L+++M + N Y+
Sbjct: 206 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYST 265
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ NL+ M G PN + L+ E+ A +L +DM+E+
Sbjct: 266 VIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERK 325
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + L D GKLVEAEK + EMI++ P ++
Sbjct: 326 INPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 368
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 109/223 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G +P++V+Y +++ CK ++ A+ ++ KM I +V+ Y+++I L
Sbjct: 216 MVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRH 275
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A ++ EM+ G P+ Y++ I C +R DAS L+ +M+E+ ++PN T+N
Sbjct: 276 EDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNA 335
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F L + LY M+ P+ + L+ ++++ A ++ M+ K
Sbjct: 336 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 395
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + L + C ++ E + F EM ++G + V++
Sbjct: 396 CFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTY 438
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 101/217 (46%), Gaps = 2/217 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P I +N L+ K ++ + + EKM+ IS ++ +Y +I Q A +
Sbjct: 83 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 142
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L +M + G P ++ + YC KR+ DA L+D+MVE G P+ T+ +
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYIL 186
N + L RM+ GC PN + +V LCKR + +++A L N M + ++
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD-IDLAFNLLNKMEAAKIEANVV 261
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + D LC +A F EM KG +P+ +++
Sbjct: 262 IYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITY 298
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 106/224 (47%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ +G+ ++ +YN LI+ +C+ Q+ A ++ KM P +++ +S++ G +
Sbjct: 111 MQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR 170
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A ++ +M E G PD + I + + +A L+D MV++G PN TY +
Sbjct: 171 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 230
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEK 179
D+ ++NL +M N ++ LCK + + + AL L+ +M K
Sbjct: 231 VVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDD-ALNLFTEMENK 289
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G ++ L LC+ + +A + +MIE+ P+ V+F
Sbjct: 290 GVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTF 333
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 58/113 (51%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV P+I++YN L+D CK+ ++EKA + E ++ + P + +Y +I G+ G+ +
Sbjct: 465 GVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDG 524
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
D+ + G PD YN I +C +A L +M E G P++ T
Sbjct: 525 WDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 75/177 (42%), Gaps = 2/177 (1%)
Query: 80 AAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYC 139
+ Y +RN + +L DA GL MV+ P+ +N +L
Sbjct: 50 SGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGE 109
Query: 140 RMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMG 199
+M G N + L+ R+ ++ +AL L M++ G+ I+ L + C
Sbjct: 110 KMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGK 169
Query: 200 KLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFG--PSMI 254
++ +A +M+E G++P ++F + + L NK L ++M G P+++
Sbjct: 170 RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLV 226
>gi|326524037|dbj|BAJ97029.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 599
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 101/215 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ GV PD+V +N L+ + D + E A+++ +M D P+ +SYT+++ GLG G+
Sbjct: 218 MKAAGVAPDVVVFNTLLAGFVADGRFEDAFELAREMERRDCPPNAVSYTTLMQGLGSKGR 277
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+ V EM+ GC PD+ Y + +C A RL +D M GL + Y
Sbjct: 278 VDEVMRVFVEMRRKGCTPDSVTYGTLVTAFCKAGRLSQGYEFLDSMSRDGLRVDPGVYLG 337
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
FF L L RM C P+ +++L + + + A+ LWN+ G
Sbjct: 338 FFVAHEKEQQLEECLELMERMRECRCPPDLNIYNVVIRLSCKLGETKQAIALWNETENSG 397
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
+ ++ + L G LV+A F +M+ +G
Sbjct: 398 LSPGVDTFAIMVNGLVGQGSLVDACNYFKDMVGRG 432
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 97/278 (34%), Gaps = 73/278 (26%)
Query: 1 MREMGVKPDIVSYNCLIDVYCK-----------------------------------DRQ 25
MR G PD V+Y L+ +CK ++Q
Sbjct: 288 MRRKGCTPDSVTYGTLVTAFCKAGRLSQGYEFLDSMSRDGLRVDPGVYLGFFVAHEKEQQ 347
Query: 26 VEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNA 85
+E+ +++E+MR E C PD YN
Sbjct: 348 LEECLELMERMR-----------------------------------ECRCPPDLNIYNV 372
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
IR C + A L +E GLSP T+ + L + N + M+G G
Sbjct: 373 VIRLSCKLGETKQAIALWNETENSGLSPGVDTFAIMVNGLVGQGSLVDACNYFKDMVGRG 432
Query: 146 CLPNTQSCMF--LVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVE 203
Q + L+ R EK+E+A +W + +G + + L + E
Sbjct: 433 LFVAPQYGVLKDLLNALVRDEKLELAKDVWGCIASRGCELNVSAWTIWIHALYAKKHVKE 492
Query: 204 AEKSFLEMIEKGHKPSQVSFRRI-KALMELANKQEALQ 240
A L+M+E G P +F ++ K L +L N+Q A +
Sbjct: 493 ACSYCLDMLEAGLMPQPDTFAKLMKGLKKLYNRQIAAE 530
>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
Length = 624
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 119/237 (50%), Gaps = 5/237 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G P+I +YN +++ C++R++++A K++E+M PDV++Y S I GL +
Sbjct: 106 MRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDR 165
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+AR L M PD +Y I C + L AS ++D+M +G +P+ TY+
Sbjct: 166 VDEARKFLARMP---VTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSS 222
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F ++ + L M+ GC PN + L+ R + A + +M +G
Sbjct: 223 LIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRG 282
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQE 237
F ++ + D LC ++ +A+ F M+E+G P+ S+ + + EL K+E
Sbjct: 283 FTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSML--VEELCKKKE 337
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 118/256 (46%), Gaps = 34/256 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+EMG PD YN LI Y K + +A+K + +M P V++YT+I+ GL G+
Sbjct: 36 MKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGR 95
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +L EM++ GC P+ YN + C ++L +A +++EM +G P+ TYN
Sbjct: 96 TKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNS 155
Query: 121 FFR------------------------VFYW--------SNDLRSSWNLYCRMMGTGCLP 148
F + V Y S DL S+ + +M GC P
Sbjct: 156 FIKGLCKCDRVDEARKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTP 215
Query: 149 NTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKS 207
+ + L+ CK E VE A+ L + M++ G ++ + L L +G + +AE
Sbjct: 216 DVVTYSSLIDGFCKGGE-VERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDM 274
Query: 208 FLEMIEKGHKPSQVSF 223
+EM +G P VS+
Sbjct: 275 LVEMERRGFTPDVVSY 290
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 116/215 (53%), Gaps = 2/215 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+ M V PD+VSY +I+ CK ++ A +++++M + +PDV++Y+S+I G G+
Sbjct: 173 LARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGE 232
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A +L M + GC P+ AYN+ + + A ++ EM +G +P+ +YN
Sbjct: 233 VERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNA 292
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEK 179
+ ++ + ++ RM+ GC PN S LV +LCK++E ++ A+ L EK
Sbjct: 293 CIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKE-LDDAITLVEQAREK 351
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEK 214
IL+ VL D LC G+ EA F +++++
Sbjct: 352 YQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDE 386
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 126/294 (42%), Gaps = 72/294 (24%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD+V+Y+ LID +CK +VE+A +++ M P++++Y S++G L +G
Sbjct: 208 MTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGH 267
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA D+L EM+ G PD +YNA I C A+R++ A + D MVE+G +PNA++Y++
Sbjct: 268 IGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSM 327
Query: 121 FFRVFYWSNDLRSSWNL---------------YCRMMGTGCLPN--TQSCMFLVKL---- 159
+L + L Y ++ C ++C K+
Sbjct: 328 LVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEK 387
Query: 160 ----------------CKRQEKVEIALQL--------------WN--------------- 174
CKR++ ++ ALQ+ WN
Sbjct: 388 ICEPDVFFYNVMLDSHCKRRQ-IDKALQIHKQMLERNCCNVVTWNILVHGLCVDDRLSDA 446
Query: 175 -----DMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
MV++GF + L D +C GK A + F E ++ G P V++
Sbjct: 447 ETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTY 500
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 109/257 (42%), Gaps = 7/257 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + +PD ++ L+ C+ Q+EKA +++ +M++ PD Y ++I G
Sbjct: 1 MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A L EM + C P Y + C A R +DA L+DEM +KG SPN TYN+
Sbjct: 61 FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDM-VEK 179
L + + M G P+ + +K + ++V+ A + M V
Sbjct: 121 IVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVTP 180
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
SY V + LC G L A + +M +G P V++ + + E
Sbjct: 181 DVVSYTTV----INGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERA 236
Query: 240 QNLSNKMALFG--PSMI 254
L + M G P+M+
Sbjct: 237 MGLLDSMLKLGCRPNMV 253
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 103/236 (43%), Gaps = 34/236 (14%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
+PD+ YN ++D +CK RQ++KA +I ++M + + +V+++ ++ GL + + A
Sbjct: 390 EPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNCC-NVVTWNILVHGLCVDDRLSDAET 448
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
+L M + G PD Y + C + A L +E V+ G P+ TY+
Sbjct: 449 MLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLV 508
Query: 127 WSNDLRSSWNLYCRM--------------MGTGCL--------------PNTQSCMFLVK 158
N ++ L+ ++ G+G L PN ++ F +
Sbjct: 509 HENMAEEAYLLFTKLDVALWNAMILGYAENGSGDLGLKLFVELIESDVEPNART--FGKE 566
Query: 159 LCKRQEKVEI---ALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEM 211
+ + K E A L++ V+ GF + V++ L D+ G L EA + F M
Sbjct: 567 ISGKLVKAESLGKARGLFDRAVKGGFFPDLFVANTLIDVFAKCGDLEEARRIFYSM 622
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 64/170 (37%), Gaps = 29/170 (17%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGL----- 55
M + G PD V+Y L+D CK + A ++ E+ PDV++Y+++I GL
Sbjct: 453 MVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENM 512
Query: 56 -----------------------GLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCI 92
G D + E+ E P+A + I +
Sbjct: 513 AEEAYLLFTKLDVALWNAMILGYAENGSGDLGLKLFVELIESDVEPNARTFGKEISGKLV 572
Query: 93 -AKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRM 141
A+ L A GL D V+ G P+ N VF DL + ++ M
Sbjct: 573 KAESLGKARGLFDRAVKGGFFPDLFVANTLIDVFAKCGDLEEARRIFYSM 622
>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
Length = 1035
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 122/256 (47%), Gaps = 2/256 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ PD+V+Y +ID CK + ++A + ++M D + P++ +Y +I G +G+
Sbjct: 229 MMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGK 288
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ +L+EM G P+ Y + + C R R+A D M+ KG+ P+ TTY +
Sbjct: 289 WKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGI 348
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L +L M+ G PN + ++ A+ ++N M ++G
Sbjct: 349 MLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQG 408
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ L D LC +G++ +AE F +MI +G P V F + + +K E ++
Sbjct: 409 LSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVE 468
Query: 241 NLSNKMALFG--PSMI 254
L +M G P+++
Sbjct: 469 ELFFEMLNVGIHPNIV 484
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 130/275 (47%), Gaps = 36/275 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G+ PD VSY LID CK +V+ A +M +E ++PD++ ++S++ GL V +
Sbjct: 404 MRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDK 463
Query: 61 PDKARDVLKEMKEYGCY-----------------------------------PDAAAYNA 85
+K ++ EM G + PD +YN
Sbjct: 464 WEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNT 523
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
I +C+A + +AS L++ MV GL P++ +YN + + + S+++ + +M+ G
Sbjct: 524 LIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNG 583
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
P + ++ + ++ A +L+ +M+ G I +++ + LC + EA
Sbjct: 584 ITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAI 643
Query: 206 KSFLEMIEKGHKPSQVSFR-RIKALMELANKQEAL 239
K F + KG + + ++F I AL++ K++A+
Sbjct: 644 KMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAM 678
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 113/227 (49%), Gaps = 2/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G+ P+IV +N ++ CK+ +V + ++V+ + + PDVISY ++I G L G
Sbjct: 474 MLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGT 533
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A +L+ M G PD+ +YN + YC A R+ A +M+ G++P TYN
Sbjct: 534 IDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNT 593
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ + + LY M+ +G + + + L LCK V+ A++++ ++ K
Sbjct: 594 ILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCK-SNCVDEAIKMFQNLCSK 652
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G I+ +++ L G+ +A F + G + V++R +
Sbjct: 653 GLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLV 699
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 98/226 (43%), Gaps = 3/226 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDI---SPDVISYTSIIGGLGL 57
M E+G PD VSYN L+ C +++ E+A +++ M D+ + P+V+SY+++I G
Sbjct: 156 MPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVINGFFT 215
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
GQ DK ++ EM + G PD Y I C A+ A + +M++ G+ PN T
Sbjct: 216 EGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDT 275
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
YN + + + M G PN + L+ + + A ++ M+
Sbjct: 276 YNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMI 335
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
KG + ++ G L E M+ G P+ F
Sbjct: 336 GKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIF 381
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 106/226 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GVKP+I +YNCLI Y + ++ +++E+M P+ +Y S++ L G+
Sbjct: 264 MIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGR 323
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR M G P Y + Y L + L++ MV G+SPN +N+
Sbjct: 324 CREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNI 383
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
FF + + + +++ +M G P+ S L+ + +V+ A +N M+ +G
Sbjct: 384 FFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEG 443
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
I+V L LC + K + E+ F EM+ G P+ V F I
Sbjct: 444 VTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTI 489
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 97/217 (44%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
MGV+PD++SYN LID +C +++A K++E M + PD SY +++ G G+ D
Sbjct: 512 MGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDS 571
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
A ++M G P YN + KR +A L M+ G + TYN+
Sbjct: 572 AYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILN 631
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
SN + + ++ + G N + ++ + + E A+ L+ + G
Sbjct: 632 GLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQ 691
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQ 220
++ ++ + L + G L E + F M + G P+
Sbjct: 692 NVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNS 728
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 82/180 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G+KPD SYN L+ YCK +++ AY KM I+P V++Y +I+ GL +
Sbjct: 544 MVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKR 603
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A+++ M G D YN + C + + +A + + KGL N T+N+
Sbjct: 604 FSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNI 663
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ +L+ + G + N + +V+ + +E L++ M + G
Sbjct: 664 MIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNG 723
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 95/221 (42%), Gaps = 10/221 (4%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
V P+ +Y+ LI +C+ +E + + D I ++ GL + +A
Sbjct: 90 VAPNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAM 149
Query: 66 DVL-KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGL---SPNATTYNLF 121
DVL + M E GC PD +YN ++ C KR +A L+ M + + PN +Y+
Sbjct: 150 DVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTV 209
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQ--EKVEIALQLWNDMVE 178
F+ + +NL+ MM G P+ + ++ LCK Q ++ E Q M++
Sbjct: 210 INGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQ---QMID 266
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
G I + L +GK E + EM G KP+
Sbjct: 267 NGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPN 307
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/240 (19%), Positives = 93/240 (38%), Gaps = 28/240 (11%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G K DI +YN +++ CK V++A K+ + + + + ++I++ +IG L G+
Sbjct: 614 MINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGR 673
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A D+ + G + Y + N L + L M + G +PN+ N
Sbjct: 674 KEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNA 733
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK---------------------- 158
R D+ + ++ + L+
Sbjct: 734 LVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYRILN 793
Query: 159 ------LCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMI 212
L K+ +++ A L+ +M+ KG ++ + + L G+ EA++ +L MI
Sbjct: 794 EANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMI 853
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/129 (21%), Positives = 60/129 (46%)
Query: 22 KDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAA 81
K R+++ AY + +M + ++PDV++Y +I+ GL G+ +A+++ M +
Sbjct: 803 KARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIY 862
Query: 82 AYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRM 141
YN + C + + +A + + KGL N T+N+ + +L+ +
Sbjct: 863 TYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAI 922
Query: 142 MGTGCLPNT 150
G +P+
Sbjct: 923 PANGLVPDV 931
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 71/181 (39%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ P +V+YN ++ + ++ +A ++ M + D+ +Y I+ GL
Sbjct: 579 MLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNC 638
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + + + G + +N I R DA L + GL N TY L
Sbjct: 639 VDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRL 698
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
L +L+ M G PN+Q LV+ + + A + + E+
Sbjct: 699 VVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERN 758
Query: 181 F 181
F
Sbjct: 759 F 759
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 55/123 (44%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
+I +YN +++ CK V++A+K+ + + + + ++I++ +IG L G+ + A D+
Sbjct: 860 NIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLF 919
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
+ G PD Y N L + GL M + G ++ N R
Sbjct: 920 AAIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQR 979
Query: 129 NDL 131
D+
Sbjct: 980 GDI 982
Score = 43.9 bits (102), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 74/183 (40%), Gaps = 3/183 (1%)
Query: 2 REM---GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLV 58
REM G+ PD+V+YN ++ + + +A ++ M + ++ +Y I+ GL
Sbjct: 815 REMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKS 874
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
D+A + + + G + +N I R DA L + GL P+ TY
Sbjct: 875 NCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTY 934
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
L L L+ M +G +++ LV+ ++ + A + + E
Sbjct: 935 RLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQRGDISRAGAYLSKLDE 994
Query: 179 KGF 181
K F
Sbjct: 995 KNF 997
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 54/121 (44%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G++ +I+++N +I K + E A + + + PDV++Y + L G ++
Sbjct: 891 GLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEF 950
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ M++ G D+ NA +R + A + ++ EK S A+T + +
Sbjct: 951 DGLFLTMEKSGTPLDSRLLNALVRRLLQRGDISRAGAYLSKLDEKNFSLEASTTSELISL 1010
Query: 125 F 125
F
Sbjct: 1011 F 1011
>gi|357508583|ref|XP_003624580.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499595|gb|AES80798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 585
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 123/222 (55%), Gaps = 11/222 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + ++ D+VSY +I Y K ++ + ++ E+M+ +I+PD Y ++I L
Sbjct: 299 MSKRRIQHDVVSYASIISCYSKSSKLYRVLQLFEQMKKRNITPDRKVYNAVIFSLAKNRM 358
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A +++ +M++ PDA YN+ I+ C A+++ +A + + M+E+G+SP+ T++
Sbjct: 359 VKEAVNLIIKMEDNNVTPDAITYNSLIKPLCKARKIDEAKEIFNVMLERGISPSIRTFHA 418
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
FFR+ ++ + L +M GC P ++ + L++ R +++ ++WN M E G
Sbjct: 419 FFRILRVKEEV---FELLDKMKELGCNPTIETYIMLIRKFCRWRQLDEVKRIWNAMREDG 475
Query: 181 FG----SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
G SYI++ LF L C K+ EA K ++EM EKG P
Sbjct: 476 IGHDRSSYIVLIHGLF-LNC---KVEEAYKYYIEMQEKGFLP 513
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 87/181 (48%), Gaps = 4/181 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + V PD ++YN LI CK R++++A +I M + ISP + ++ + L +
Sbjct: 369 MEDNNVTPDAITYNSLIKPLCKARKIDEAKEIFNVMLERGISPSIRTFHAFFRILRV--- 425
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++ ++L +MKE GC P Y IR +C ++L + + + M E G+ + ++Y +
Sbjct: 426 KEEVFELLDKMKELGCNPTIETYIMLIRKFCRWRQLDEVKRIWNAMREDGIGHDRSSYIV 485
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ + + ++ Y M G LP ++ M L RQ A L ++ +E
Sbjct: 486 LIHGLFLNCKVEEAYKYYIEMQEKGFLPEPKTESMLQAWLSGRQVTDSQATDLEHNQLEH 545
Query: 180 G 180
G
Sbjct: 546 G 546
Score = 40.4 bits (93), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 50/251 (19%), Positives = 97/251 (38%), Gaps = 44/251 (17%)
Query: 13 YNCLIDVYCKDRQVEKAYKIVEKMRDEDISP-DVISYTSIIGGL-GLVGQPDKARDVLKE 70
+ L+ C+ + V+ A ++ ++++ P D S+ I+ G L+ A + +E
Sbjct: 241 FQGLLSALCRYKNVQDAEHLL--FCNKNVFPLDTKSFNIILNGWCNLIVSARNAERIWEE 298
Query: 71 MKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSND 130
M + D +Y + I Y + +L L ++M ++ ++P+ YN +
Sbjct: 299 MSKRRIQHDVVSYASIISCYSKSSKLYRVLQLFEQMKKRNITPDRKVYNAVIFSLAKNRM 358
Query: 131 LRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDV 190
++ + NL +M P+ + L+K
Sbjct: 359 VKEAVNLIIKMEDNNVTPDAITYNSLIKP------------------------------- 387
Query: 191 LFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFG 250
LC K+ EA++ F M+E+G P S R A + +E + L +KM G
Sbjct: 388 ----LCKARKIDEAKEIFNVMLERGISP---SIRTFHAFFRILRVKEEVFELLDKMKELG 440
Query: 251 PSMIPKREEYL 261
+ P E Y+
Sbjct: 441 CN--PTIETYI 449
>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 873
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 108/216 (50%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
++GV+P++ ++N LI YC D E+A +++ +M + PD ++Y +++ L Q
Sbjct: 204 KLGVQPNVNTFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLT 263
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
+ RD+L +MK G +P+ YN + YC K L++A+ +++ M KG+ P+ TYN
Sbjct: 264 QVRDLLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMV 323
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
R + + L +M +P+ + L+ C + A +L +M +G
Sbjct: 324 RGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVK 383
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
+ +++ C GK+ EA ++M+E G P
Sbjct: 384 ENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSP 419
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 110/222 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + PD+V+YN LID + R + A+K+VE+M+ + + +++ +I G+
Sbjct: 342 MESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGK 401
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A +V+ +M E G PD YN I YC A ++ +A +MDEM KGL + T N
Sbjct: 402 IDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNT 461
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
L ++ L + G + + + L+ + E+ + AL+LW +M E G
Sbjct: 462 LLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETG 521
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
+ I+ + + LC GK +A E++EKG P + +
Sbjct: 522 IVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDEST 563
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 126/268 (47%), Gaps = 2/268 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+K D + N L+ C ++Q++ AY + K R D ++Y ++I G Q
Sbjct: 447 MGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQ 506
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + +EMKE G YN IR C++ + A ++E++EKGL P+ +T N+
Sbjct: 507 ADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNI 566
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ W + ++ + +M+ P+ +C L++ R+ +E L L+N + KG
Sbjct: 567 IIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKG 626
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ +++ C +L +A EM K +P + ++ I + A + E +
Sbjct: 627 KPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAE 686
Query: 241 NLSNKMALFGPSMIPKREEYLAEMSASD 268
L+ K A G + K ++ E+ SD
Sbjct: 687 KLALKFAEKGQQV--KTQDTSPELGTSD 712
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 104/260 (40%), Gaps = 46/260 (17%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
R+ G D V+Y LI Y KD Q ++A K+ E+M++ I +I+Y +II GL L G+
Sbjct: 483 RKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKT 542
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPN------- 114
D+A D L E+ E G PD + N I YC + A ++MVE L P+
Sbjct: 543 DQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNIL 602
Query: 115 ----------------------------ATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGC 146
TYN+ F L +++L M G
Sbjct: 603 LRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNL 662
Query: 147 LPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG-----------FGSYILVSDVLFDLL 195
P+ + +V + + E A +L EKG G+ ++ L
Sbjct: 663 EPDRYTYNAIVTGLTKAGRTEEAEKLALKFAEKGQQVKTQDTSPELGTSDMMYSEQISSL 722
Query: 196 CDMGKLVEAEKSFLEMIEKG 215
C GK +A K F + +KG
Sbjct: 723 CTQGKYKDAMKLFQQAEQKG 742
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 116/297 (39%), Gaps = 37/297 (12%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ GVK + V++N +I +C + ++++A ++ KM + SPD +Y ++I G G+
Sbjct: 377 MKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGK 436
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLM----------------- 103
+A ++ EM G D N + C+ K+L DA L
Sbjct: 437 MAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGT 496
Query: 104 ------------------DEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
+EM E G+ TYN R S + + ++ G
Sbjct: 497 LIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKG 556
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
+P+ + ++ + VE A Q N MVE I ++L LC G L +
Sbjct: 557 LVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGL 616
Query: 206 KSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFGPSMIPKREEYLA 262
F I KG V++ I + + E +L +M G ++ P R Y A
Sbjct: 617 TLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEME--GKNLEPDRYTYNA 671
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 65/124 (52%), Gaps = 12/124 (9%)
Query: 7 KP-DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
KP D V+YN +I +CK+R++E A+ ++ +M +++ PD +Y +I+ GL G+ ++A
Sbjct: 627 KPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAE 686
Query: 66 DVLKEMKEYG-------CYPDAAA----YNAAIRNYCIAKRLRDASGLMDEMVEKGLSPN 114
+ + E G P+ Y+ I + C + +DA L + +KG+S N
Sbjct: 687 KLALKFAEKGQQVKTQDTSPELGTSDMMYSEQISSLCTQGKYKDAMKLFQQAEQKGVSLN 746
Query: 115 ATTY 118
TY
Sbjct: 747 KYTY 750
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 82/191 (42%), Gaps = 3/191 (1%)
Query: 17 IDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK---ARDVLKEMKE 73
+ Y +Q ++I KM+ P++++ +++ L +R+V ++ +
Sbjct: 145 LAAYVISKQPHLGHQIFNKMKRLRFRPNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVK 204
Query: 74 YGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRS 133
G P+ +N I YC +A L+++M E G P+ TYN + L
Sbjct: 205 LGVQPNVNTFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQ 264
Query: 134 SWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFD 193
+L +M +G PN + LV + + ++ A ++ M KG + + +
Sbjct: 265 VRDLLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVR 324
Query: 194 LLCDMGKLVEA 204
LCD GK+ EA
Sbjct: 325 GLCDEGKIDEA 335
>gi|414872586|tpg|DAA51143.1| TPA: empty pericarp4 [Zea mays]
Length = 595
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 102/215 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ V D+V +N L+ + + + E A+++ +M P+ +SYT++I GLG G+
Sbjct: 215 MKAADVALDVVVFNTLLAGFVAEGRFEDAFELAGQMEQRGCPPNAVSYTTLIQGLGARGR 274
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A V EM+ GC PDA Y + +C A ++ +D M GL +A Y+
Sbjct: 275 VDEAMRVFVEMRRKGCAPDAVTYGTLVNTFCKAGKISQGYEFLDAMSRDGLRVDAAVYHG 334
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
FF L L RM C P+ + +++L R + + A+ LWN+M G
Sbjct: 335 FFVAHEKKEQLEECLELMERMRECRCPPDLKIYNVVIRLACRLGETKQAMTLWNEMESAG 394
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
+ ++ L G L+EA F +M+ +G
Sbjct: 395 LSPVVDTFAIVVSGLVGQGLLIEACSYFKDMVGRG 429
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 97/276 (35%), Gaps = 73/276 (26%)
Query: 1 MREMGVKPDIVSYNCLIDVYCK-----------------------------------DRQ 25
MR G PD V+Y L++ +CK Q
Sbjct: 285 MRRKGCAPDAVTYGTLVNTFCKAGKISQGYEFLDAMSRDGLRVDAAVYHGFFVAHEKKEQ 344
Query: 26 VEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNA 85
+E+ +++E+MR+ PD+ Y +I
Sbjct: 345 LEECLELMERMRECRCPPDLKIYNVVI--------------------------------- 371
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
R C + A L +EM GLSP T+ + L + + + M+G G
Sbjct: 372 --RLACRLGETKQAMTLWNEMESAGLSPVVDTFAIVVSGLVGQGLLIEACSYFKDMVGRG 429
Query: 146 --CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVE 203
+P L+ R EK+E+A +W +V KG + + L + E
Sbjct: 430 LFVVPQYGVLKDLLNALVRDEKLELAKDVWKCIVSKGCELNVSAWTIWIHALFAKKHVKE 489
Query: 204 AEKSFLEMIEKGHKPSQVSFRRI-KALMELANKQEA 238
A L+M+E G P +F ++ K L +L N+Q A
Sbjct: 490 ACLYCLDMLEAGLMPQPDTFAKLMKGLKKLYNRQIA 525
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/122 (20%), Positives = 52/122 (42%)
Query: 83 YNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMM 142
Y A + +C +L +A ++ M ++ + +N F ++ L +M
Sbjct: 192 YTALLYGWCRQGKLDEAKHVLARMKAADVALDVVVFNTLLAGFVAEGRFEDAFELAGQME 251
Query: 143 GTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLV 202
GC PN S L++ + +V+ A++++ +M KG + L + C GK+
Sbjct: 252 QRGCPPNAVSYTTLIQGLGARGRVDEAMRVFVEMRRKGCAPDAVTYGTLVNTFCKAGKIS 311
Query: 203 EA 204
+
Sbjct: 312 QG 313
>gi|449455956|ref|XP_004145716.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial-like [Cucumis sativus]
gi|449492939|ref|XP_004159147.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial-like [Cucumis sativus]
Length = 535
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 127/273 (46%), Gaps = 35/273 (12%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
+ GV P++ + N LI CK VE A K+ ++M I P+V++YT+I+GG G
Sbjct: 185 KFGVVPNVFTCNILIKALCKKNDVEGARKVFDEMPSMGIVPNVVTYTTILGGYVSRGDMI 244
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
A+ V E+ ++G PDA Y + Y R DA +MDEM E G+ PN TY +
Sbjct: 245 GAKRVFGELFDHGWLPDATTYTILMDGYVKQGRFTDAVKVMDEMEENGVEPNDITYGVII 304
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV----- 177
+ + NL M+ +PN+ C ++ + + +V+ A ++W ++
Sbjct: 305 LGYCKERKSGEALNLLNDMLEKKYIPNSALCCKVIDVLCGEGRVKEACKMWEKLLKKNCT 364
Query: 178 -----------------------------EKGFGSYILVSDVLFDLLCDMGKLVEAEKSF 208
E+G S +L + L +C+MG+L EA + +
Sbjct: 365 PDNAITSTLIHWLCKEGNIWEARKLFNEFERGTISSLLTYNTLIAGMCEMGELCEAARLW 424
Query: 209 LEMIEKGHKPSQVSFRR-IKALMELANKQEALQ 240
+M+EKG P++ ++ IK +++ +E ++
Sbjct: 425 DDMLEKGCVPNEFTYNMLIKGFLKVGKAKEVIK 457
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 78/157 (49%), Gaps = 5/157 (3%)
Query: 16 LIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYG 75
+IDV C + +V++A K+ EK+ ++ +PD +++I L G +AR + E E G
Sbjct: 338 VIDVLCGEGRVKEACKMWEKLLKKNCTPDNAITSTLIHWLCKEGNIWEARKLFNEF-ERG 396
Query: 76 CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSW 135
YN I C L +A+ L D+M+EKG PN TYN+ + F +
Sbjct: 397 TISSLLTYNTLIAGMCEMGELCEAARLWDDMLEKGCVPNEFTYNMLIKGFLKVGKAKEVI 456
Query: 136 NLYCRMMGTGCLPNTQSCMFLV----KLCKRQEKVEI 168
+ M+ GCL N + + LV KL KR+E + I
Sbjct: 457 KVVEEMLDKGCLLNESTYLILVEGLLKLGKREELLNI 493
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 87/180 (48%), Gaps = 1/180 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E GV+P+ ++Y +I YCK+R+ +A ++ M ++ P+ +I L G+
Sbjct: 288 MEENGVEPNDITYGVIILGYCKERKSGEALNLLNDMLEKKYIPNSALCCKVIDVLCGEGR 347
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + +++ + C PD A + I C + +A L +E E+G + TYN
Sbjct: 348 VKEACKMWEKLLKKNCTPDNAITSTLIHWLCKEGNIWEARKLFNEF-ERGTISSLLTYNT 406
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+L + L+ M+ GC+PN + L+K + K + +++ +M++KG
Sbjct: 407 LIAGMCEMGELCEAARLWDDMLEKGCVPNEFTYNMLIKGFLKVGKAKEVIKVVEEMLDKG 466
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/123 (21%), Positives = 58/123 (47%), Gaps = 1/123 (0%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E G +++YN LI C+ ++ +A ++ + M ++ P+ +Y +I G VG+
Sbjct: 394 ERGTISSLLTYNTLIAGMCEMGELCEAARLWDDMLEKGCVPNEFTYNMLIKGFLKVGKAK 453
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
+ V++EM + GC + + Y + + + ++ ++ G + + +NLF
Sbjct: 454 EVIKVVEEMLDKGCLLNESTYLILVEGLLKLGKREELLNILSMIISSG-AVDFKAWNLFV 512
Query: 123 RVF 125
F
Sbjct: 513 PHF 515
>gi|359487102|ref|XP_002274044.2| PREDICTED: pentatricopeptide repeat-containing protein At1g80550,
mitochondrial-like [Vitis vinifera]
Length = 390
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 108/215 (50%), Gaps = 3/215 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV + SY+ +D+ CK + +A K+ ++M+ + I DV++Y ++I +GL
Sbjct: 163 MDRRGVCKSLYSYSIYMDIQCKSGKPWRAVKLYKEMKKKGIRLDVVAYNTVIRAIGLSEG 222
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D + V +EMKE GC P+ YN I+ C R+R+A G+ D+M EKG +PN TY+
Sbjct: 223 VDFSIRVFREMKEVGCEPNVVTYNTIIKLLCENGRIREAYGVFDQMREKGYAPNVITYHC 282
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
FF + +++ RM+ +G P + + L+K R + +W M E+G
Sbjct: 283 FFGCIEKPKQILRTFD---RMINSGVRPRMDTYVMLMKKFGRWGFLRPVFIVWKKMEEQG 339
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
+ L D L G + A K EM+ KG
Sbjct: 340 CSPDACAYNALIDALVQKGMVDLARKYEEEMLAKG 374
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 97/221 (43%), Gaps = 17/221 (7%)
Query: 12 SYNCLIDVYCKDRQVEKAYKIVEKMRDEDIS-PDVISYT-------------SIIGGLGL 57
+YN +ID+ K + + + ++++M+ + ++ P+ +++ I+ G
Sbjct: 90 TYNGMIDILGKFFEFDLIWVLIQRMKADPVAYPNHVTFRFVFKRYAAAHLVEEILRGWFK 149
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
+G K R+ +EM G +Y+ + C + + A L EM +KG+ +
Sbjct: 150 MGWWKKCREFWEEMDRRGVCKSLYSYSIYMDIQCKSGKPWRAVKLYKEMKKKGIRLDVVA 209
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
YN R S + S ++ M GC PN + ++KL ++ A +++ M
Sbjct: 210 YNTVIRAIGLSEGVDFSIRVFREMKEVGCEPNVVTYNTIIKLLCENGRIREAYGVFDQMR 269
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
EKG+ ++ F + +++ ++F MI G +P
Sbjct: 270 EKGYAPNVITYHCFFGCIEKPKQIL---RTFDRMINSGVRP 307
>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
Length = 767
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 124/244 (50%), Gaps = 9/244 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G+ PD+ +Y+ LI +CK VEK ++E+M+ ++ P ++SY+S+ GL
Sbjct: 351 MKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRL 410
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY-- 118
D + D+ +++ G D AY+ I+ +C+ L A LM+EMV L+P+ + +
Sbjct: 411 SDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFES 470
Query: 119 --NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDM 176
+ F ++ W N L + M+ G LP+ +C ++ R+ +VE AL L N+M
Sbjct: 471 LVHGFCKMGLWVNALE----FFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEM 526
Query: 177 VEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANK 235
+G + + + + LC K A + F M+++ PS V + I + +N
Sbjct: 527 QTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNS 586
Query: 236 QEAL 239
Q+AL
Sbjct: 587 QKAL 590
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 113/231 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G+ P++ +YN +I+ CK+R+ E+A ++ M ++ P V+ Y+++I G
Sbjct: 526 MQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSN 585
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA + M + G PD AY I C R+ +A L +M E G++P+ +Y
Sbjct: 586 SQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTS 645
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F D+R +W L+ M+ G LP + LV + +++IA L ++M KG
Sbjct: 646 VIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKG 705
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALME 231
++ +VL G L +A + EM E G P +++ ++ L++
Sbjct: 706 ITPDVVTYNVLIAAHRRRGNLDKALEMLNEMKENGVLPDHMTYMMLEWLLK 756
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 87/164 (53%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++GV PD+V+Y LI++ C ++ +AY + +KM + ++PD ISYTS+I G +G
Sbjct: 596 MLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGD 655
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA + EM + G P Y + + YC R+ A L+DEM KG++P+ TYN+
Sbjct: 656 MRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNV 715
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQE 164
+L + + M G LP+ + M L L K ++
Sbjct: 716 LIAAHRRRGNLDKALEMLNEMKENGVLPDHMTYMMLEWLLKAKK 759
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 106/224 (47%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G K D +Y+ LI +C ++ A+K++E+M +++PD ++ S++ G +G A
Sbjct: 425 GYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNA 484
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ M E G P A N I +C R+ +A LM+EM +G+ PN TYN
Sbjct: 485 LEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINR 544
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ L+ M+ LP+ L+ +Q + AL L+ M++ G
Sbjct: 545 LCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPD 604
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKA 228
++ +L ++LC ++ EA F +M E G P ++S+ + A
Sbjct: 605 MVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIA 648
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 103/230 (44%), Gaps = 8/230 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCK------DRQVEKAYKIVEKMRDEDISPDVISYTSIIGG 54
M+ G P++ +Y +++ YCK D +A +I+E+M SP V++Y++ I G
Sbjct: 240 MKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYSTYIYG 299
Query: 55 LGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPN 114
L VG + A D ++ + + YNA I C L +A +++EM G+SP+
Sbjct: 300 LCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPD 359
Query: 115 ATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLW 173
TY++ F D+ L M + P+ S L LCK++ +I+L ++
Sbjct: 360 VYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLS-DISLDIF 418
Query: 174 NDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
D+ G+ +L C G L A K EM+ P +F
Sbjct: 419 RDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNF 468
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 88/221 (39%), Gaps = 8/221 (3%)
Query: 10 IVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLK 69
++ ++ LI V+ + +E A + + + + S ++ L + + R + +
Sbjct: 179 VIVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRSLFE 238
Query: 70 EMKEYGCYPDAAAYNAAIRNYCIAK------RLRDASGLMDEMVEKGLSPNATTYNLFFR 123
EMK G P+ Y + YC R A+ +++EM G SP TY+ +
Sbjct: 239 EMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYSTYIY 298
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFG 182
+ S+ + ++ L N ++ LCK+ E E AL++ +M G
Sbjct: 299 GLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDE-ALKVLEEMKSCGIS 357
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ +L C G + + EM +PS VS+
Sbjct: 358 PDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSY 398
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 42/208 (20%), Positives = 84/208 (40%), Gaps = 27/208 (12%)
Query: 25 QVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYN 84
+V + K M+ S + ++ +++ L L G M+ Y D Y
Sbjct: 104 EVARHIKFSTTMKKYGFSRSIDAFRTVVNVLALAGM---------HMEVYALLRDIVCYY 154
Query: 85 AAIRNYCIAKRLRDASGLMDEMVE--KGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMM 142
+ DA L ++E K + + ++L +VF ++ L ++ +++ +
Sbjct: 155 NKVN--------LDAFELFPILLESPKDAARSVIVFDLLIKVFAANSMLENAVDVFLQAK 206
Query: 143 GTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLV 202
TG +T+SC FL+K + E L+ +M G + ++ + C G
Sbjct: 207 KTGLELSTRSCNFLLKCLAEANRREFLRSLFEEMKSTGPPPNVFTYTIMMNFYCK-GNFG 265
Query: 203 EAE------KSFLEMIEK-GHKPSQVSF 223
EA+ LE +E+ G P+ V++
Sbjct: 266 EADIDTRQATEILEEMERNGESPTVVTY 293
>gi|224102411|ref|XP_002312667.1| predicted protein [Populus trichocarpa]
gi|222852487|gb|EEE90034.1| predicted protein [Populus trichocarpa]
Length = 512
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 114/235 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G KPD+V+YN L++ C + E+A K+++KM I PDV SY ++
Sbjct: 246 MSRTGCKPDLVTYNVLLNYCCNEFMFEEAVKLLKKMECSAIEPDVYSYNQLLKAHCKANH 305
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
PDKA + + D +YN I+ +C R A L +EM KG++P+ T+ +
Sbjct: 306 PDKAYLFMVTKMVPKGFCDVVSYNTIIKAFCSISNNRRAYKLFEEMGRKGIAPDVVTFTI 365
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ F + + L M G G LP+ ++ + KVE+A ++ DMVEKG
Sbjct: 366 LIKAFLREGNSDMAKKLLDLMAGMGLLPDRIFYTTIIDHHCKSGKVEMAHSIFCDMVEKG 425
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANK 235
++ + L + C ++ E + +M+++G P +V+++ I + NK
Sbjct: 426 ITPDVVSYNALINGFCKSLRVGEVMHLYEQMLQRGSFPDEVTYKLIIGALVRENK 480
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 92/173 (53%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
D+VSYN +I +C +AYK+ E+M + I+PDV+++T +I G D A+ +L
Sbjct: 324 DVVSYNTIIKAFCSISNNRRAYKLFEEMGRKGIAPDVVTFTILIKAFLREGNSDMAKKLL 383
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
M G PD Y I ++C + ++ A + +MVEKG++P+ +YN F S
Sbjct: 384 DLMAGMGLLPDRIFYTTIIDHHCKSGKVEMAHSIFCDMVEKGITPDVVSYNALINGFCKS 443
Query: 129 NDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
+ +LY +M+ G P+ + ++ R+ K+ A ++W+ M+E+G
Sbjct: 444 LRVGEVMHLYEQMLQRGSFPDEVTYKLIIGALVRENKLSDACRVWDQMMERGL 496
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 74/145 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ PD+V++ LI + ++ + A K+++ M + PD I YT+II G+
Sbjct: 351 MGRKGIAPDVVTFTILIKAFLREGNSDMAKKLLDLMAGMGLLPDRIFYTTIIDHHCKSGK 410
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A + +M E G PD +YNA I +C + R+ + L ++M+++G P+ TY L
Sbjct: 411 VEMAHSIFCDMVEKGITPDVVSYNALINGFCKSLRVGEVMHLYEQMLQRGSFPDEVTYKL 470
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTG 145
N L + ++ +MM G
Sbjct: 471 IIGALVRENKLSDACRVWDQMMERG 495
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 62/112 (55%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M MG+ PD + Y +ID +CK +VE A+ I M ++ I+PDV+SY ++I G +
Sbjct: 386 MAGMGLLPDRIFYTTIIDHHCKSGKVEMAHSIFCDMVEKGITPDVVSYNALINGFCKSLR 445
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLS 112
+ + ++M + G +PD Y I +L DA + D+M+E+GL+
Sbjct: 446 VGEVMHLYEQMLQRGSFPDEVTYKLIIGALVRENKLSDACRVWDQMMERGLT 497
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 121/300 (40%), Gaps = 46/300 (15%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++ PDI ++N +++ ++ + E A ++ +M + PDV+++T II GL + +
Sbjct: 105 MEKLHCVPDIWAFNIYLNLLFRENREESALEVFGRMVERGREPDVVTFTIIIDGLCKMKK 164
Query: 61 PDKARDVLKEMKEYGCYPDAAA------------------------------------YN 84
D A M + G PD A YN
Sbjct: 165 FDAAVQFWLNMLDKGIRPDNKACVALAVGLCDGGQVDLAYELIIGVISGGLSEVSTLVYN 224
Query: 85 AAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSND--LRSSWNLYCRMM 142
A I +C A R+ A ++ M G P+ TYN+ Y N+ + L +M
Sbjct: 225 ALISGFCRAGRIDKALAMVSFMSRTGCKPDLVTYNVLLN--YCCNEFMFEEAVKLLKKME 282
Query: 143 GTGCLPNTQSCMFLVKL-CKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKL 201
+ P+ S L+K CK + L + MV KGF ++ + + C +
Sbjct: 283 CSAIEPDVYSYNQLLKAHCKANHPDKAYLFMVTKMVPKGFCD-VVSYNTIIKAFCSISNN 341
Query: 202 VEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEALQNLSNKMALFGPSMIPKREEY 260
A K F EM KG P V+F IKA + N A + L + MA G ++P R Y
Sbjct: 342 RRAYKLFEEMGRKGIAPDVVTFTILIKAFLREGNSDMA-KKLLDLMA--GMGLLPDRIFY 398
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 71/171 (41%)
Query: 48 YTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMV 107
Y + I G D A V EM C YN I R A +M
Sbjct: 12 YRTRIASYVKAGLIDYAVKVFDEMTLSECRVFGIDYNRFIGVLIRHSRFDLAHHYYSKMA 71
Query: 108 EKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVE 167
G S ++ TY+ F + + NL M C+P+ + + L R+ + E
Sbjct: 72 PLGFSLSSFTYSRFISGLCQTKEFTFIDNLLKDMEKLHCVPDIWAFNIYLNLLFRENREE 131
Query: 168 IALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
AL+++ MVE+G ++ ++ D LC M K A + +L M++KG +P
Sbjct: 132 SALEVFGRMVERGREPDVVTFTIIIDGLCKMKKFDAAVQFWLNMLDKGIRP 182
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 84/203 (41%)
Query: 13 YNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMK 72
Y I Y K ++ A K+ ++M + I Y IG L + D A +M
Sbjct: 12 YRTRIASYVKAGLIDYAVKVFDEMTLSECRVFGIDYNRFIGVLIRHSRFDLAHHYYSKMA 71
Query: 73 EYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLR 132
G + Y+ I C K L+ +M + P+ +N++ + + N
Sbjct: 72 PLGFSLSSFTYSRFISGLCQTKEFTFIDNLLKDMEKLHCVPDIWAFNIYLNLLFRENREE 131
Query: 133 SSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLF 192
S+ ++ RM+ G P+ + ++ + +K + A+Q W +M++KG L
Sbjct: 132 SALEVFGRMVERGREPDVVTFTIIIDGLCKMKKFDAAVQFWLNMLDKGIRPDNKACVALA 191
Query: 193 DLLCDMGKLVEAEKSFLEMIEKG 215
LCD G++ A + + +I G
Sbjct: 192 VGLCDGGQVDLAYELIIGVISGG 214
>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1043
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 119/229 (51%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD+V+Y+ LID K+ +VE+AY E + +P+V Y+S+I G G D+A ++
Sbjct: 806 PDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALEL 865
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
+EM+ C P+ YN + A RL A L++EM + G P+ TYN+
Sbjct: 866 FEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGK 925
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ + + + RM G +P+ + L++ + +K+ A +L++ M E+G+ ++
Sbjct: 926 MGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVT 985
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQ 236
+VL D+L GK+ EA F EM KG P ++ +K ++ + +Q
Sbjct: 986 YNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGITIGIMKRILSVREQQ 1034
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 136/282 (48%), Gaps = 42/282 (14%)
Query: 11 VSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKE 70
++YN L+ + + V++A K++E M+ + P V++YT+++ GLG G+ D+A +L+E
Sbjct: 529 ITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLRE 588
Query: 71 MKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSND 130
M++ GC P Y++ + ++ + ++ L DEMV KG + +TY+L S+D
Sbjct: 589 MEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDD 648
Query: 131 LRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDV 190
+ + +++ RM G P + L+ + EK++ ALQ++N++ E V ++
Sbjct: 649 VDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNI 708
Query: 191 -----------------------------------LFDLLCDMGKLVEAEKSFLEMIEKG 215
L D L G+L EA F +M E+G
Sbjct: 709 MVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEG 768
Query: 216 HKPSQVSFRRIKALMELANKQEALQNLSNKMALFGPSMIPKR 257
H+P V++ +LM++ K LS+ + +F +M KR
Sbjct: 769 HEPDVVAY---TSLMDVLGKG---GKLSHALIIF-RAMAKKR 803
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 95/180 (52%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ P + ++ LID K +++A K M++ SP+V++YT+++ GL G+
Sbjct: 313 MIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGR 372
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A +V EMKE C PDA AYN I A A GL EM ++GL PN TYN+
Sbjct: 373 LEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNI 432
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
V + +W L+ + G +P+ + L+ + + +++ L + +MVEKG
Sbjct: 433 MISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKG 492
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 109/226 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ + PD+ +Y L+D K ++E+A+ + KM +E PDV++YTS++ LG G+
Sbjct: 729 MKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGK 788
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A + + M + C PD Y++ I + R+ +A + + KG +PN Y+
Sbjct: 789 LSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSS 848
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + + L+ M C PN + L+ + ++ +A +L +M + G
Sbjct: 849 LIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVG 908
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ ++L D + MG + EAE F M EKG P ++F +
Sbjct: 909 CVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSL 954
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 110/223 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
++E + PD YN +++ K +V++A K+V+ M++++I PD+ +YTS++ GLG G+
Sbjct: 694 LQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGR 753
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A ++ +M E G PD AY + + +L A + M +K P+ TY+
Sbjct: 754 LEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSS 813
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ + + GC PN L+ ++ V+ AL+L+ +M +
Sbjct: 814 LIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQ 873
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I+ + L L G+L AEK EM + G P V++
Sbjct: 874 CPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTY 916
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 85/164 (51%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P+IV+YN L+ K ++ A K++E+M PD+++Y +I G+G +G D+A
Sbjct: 876 PNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESY 935
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
K MKE G PD + + I + +L +A L D M E+G +P+ TYN+ +
Sbjct: 936 FKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGR 995
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQ 171
+ + + ++ M GC+P+ + + ++ +E+ AL+
Sbjct: 996 AGKVHEAAMIFHEMKVKGCMPDGITIGIMKRILSVREQQFHALE 1039
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 96/210 (45%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
++PD ++ + + + +++ A + +++M I P V ++T +I L G D+A
Sbjct: 283 IQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEAC 342
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
MK C P+ Y + A RL +A + EM E SP+A YN
Sbjct: 343 KFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGL 402
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ + + L+ M G +PN ++ ++ + + + A QL++D+ E+G +
Sbjct: 403 GKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDV 462
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
+ L D+L G++ + EM+EKG
Sbjct: 463 FTYNTLIDVLGKGGQMDKVLAIIKEMVEKG 492
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 110/250 (44%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E G++P + +Y L+ KD +++ A +I ++++ + PD Y ++ GL +
Sbjct: 659 MKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNR 718
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A ++ MK PD Y + + + RL +A + +M E+G P+ Y
Sbjct: 719 VDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTS 778
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
V L + ++ M C+P+ + L+ ++ +VE A + + + KG
Sbjct: 779 LMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKG 838
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ V L D G + A + F EM + P+ V++ + + + A + +
Sbjct: 839 CTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAE 898
Query: 241 NLSNKMALFG 250
L +M G
Sbjct: 899 KLLEEMEKVG 908
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 101/219 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G D+ +Y+ +I+ CK V++A + +M++E + P + +Y +++ L +
Sbjct: 624 MVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEK 683
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A + E++E PD YN + + R+ +A L+D M + + P+ TY
Sbjct: 684 IDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTS 743
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
S L ++N++ +M G P+ + L+ + + K+ AL ++ M +K
Sbjct: 744 LLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKR 803
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
++ L D L G++ EA F I KG P+
Sbjct: 804 CVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPN 842
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 110/248 (44%), Gaps = 1/248 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G +P +V+Y+ L+ + K Q E++ + ++M + DV +Y+ +I L
Sbjct: 589 MEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDD 648
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A DV MKE G P Y + + +++ A + +E+ E L P+ YN+
Sbjct: 649 VDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNI 708
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
SN + + L M LP+ + L+ + ++E A ++ M E+G
Sbjct: 709 MVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEG 768
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
++ L D+L GKL A F M +K P V++ I +L + +EA
Sbjct: 769 HEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAY 828
Query: 240 QNLSNKMA 247
N ++
Sbjct: 829 YFFENSIS 836
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/258 (18%), Positives = 103/258 (39%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G P YN ++++ K A + K+ I PD ++ + G+
Sbjct: 243 MKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSGR 302
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A + ++EM + G P + I + + +A + M SPN TY
Sbjct: 303 LDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTT 362
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L + ++ M C P+ + L+ + + ++A L+ +M ++G
Sbjct: 363 LVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRG 422
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ +++ +L G+ EA + F ++ E+G P ++ + ++ + + +
Sbjct: 423 LVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVL 482
Query: 241 NLSNKMALFGPSMIPKRE 258
+ +M G I R+
Sbjct: 483 AIIKEMVEKGGECIISRD 500
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/222 (19%), Positives = 87/222 (39%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G + +Y +I ++ + +I+ M E + TS++ G A
Sbjct: 177 GYSHTVGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGA 236
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++ +MK +GC P YN + A + ++ + + P+A T+ +F
Sbjct: 237 LEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHS 296
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
F S L + M+ +G P + L+ + ++ A + +N M
Sbjct: 297 FNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPN 356
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ L + L G+L EA + F+EM E P +++ +
Sbjct: 357 VVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTL 398
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 97/226 (42%), Gaps = 1/226 (0%)
Query: 16 LIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYG 75
L+ + V A +I +M+ +P Y ++ L G A V ++ ++
Sbjct: 223 LLRTFGSTNNVSGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFR 282
Query: 76 CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSW 135
PDA + + ++ + RL A+ + EM++ G+ P T+ + S ++ +
Sbjct: 283 IQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEAC 342
Query: 136 NLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLL 195
+ M C PN + LV + ++E A +++ +M E + + L D L
Sbjct: 343 KFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGL 402
Query: 196 CDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQ-EALQ 240
G+ A F EM ++G P+ ++ + +++ A +Q EA Q
Sbjct: 403 GKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQ 448
>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 915
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 114/227 (50%), Gaps = 2/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E +P++ +Y LI C+D + A KI+ M ++ + P V++Y ++I G G
Sbjct: 335 MTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGL 394
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A ++L M+ C P+A YN I +C K + A L+ +M+E+ L PN TYN+
Sbjct: 395 SASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNI 454
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEK 179
DL S++ L M +G +P+ + +F+ LCKR VE A L+ + EK
Sbjct: 455 LIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRG-LVEEARSLFESLKEK 513
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G + ++ L D C +GK+ + +M+ G P+ +++ +
Sbjct: 514 GIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSL 560
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 106/249 (42%), Gaps = 29/249 (11%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P+ ++YN LID YCK++ ++A +V+ M DI P +YT +I L +
Sbjct: 545 MLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDE 604
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A D+ +M G +PD Y A I YC RL+DA L+ +M KG+ P+ Y L
Sbjct: 605 FDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTL 664
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKL--------------------- 159
F + + ++ + RM GC P+ + L+K
Sbjct: 665 FIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSG 724
Query: 160 --------CKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEM 211
C R+ E L L+ M E G LC +G L A + F M
Sbjct: 725 VASNDFSNCWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHM 784
Query: 212 IEKGHKPSQ 220
EKG P++
Sbjct: 785 KEKGQSPNE 793
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 103/213 (48%)
Query: 11 VSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKE 70
VSY LI +C+ R+V++A K+ +M +++ P V +YT II L +G+ +A ++ KE
Sbjct: 275 VSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKE 334
Query: 71 MKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSND 130
M E C P+ Y I + C DA +++ M+EKGL P+ TYN +
Sbjct: 335 MTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGL 394
Query: 131 LRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDV 190
S+ + M C PN ++ L+ R + + A+ L + M+E+ ++ ++
Sbjct: 395 SASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNI 454
Query: 191 LFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
L C G L A K M E G P + ++
Sbjct: 455 LIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTY 487
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 105/223 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+ PD +Y+ ID CK VE+A + E ++++ I + + Y+++I G VG+
Sbjct: 475 MNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGK 534
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
R +L +M GC P++ YN+ I YC K ++A L+D M+++ + P A TY +
Sbjct: 535 VSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTI 594
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++ + +++ +M+ TG P+ + +++ A L M KG
Sbjct: 595 LIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKG 654
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + D G + A M E G +PS ++
Sbjct: 655 IMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTY 697
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 85/195 (43%), Gaps = 2/195 (1%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
V P+I + N +++ YCK V +A V K+ +S D +YTS+I G D A
Sbjct: 200 VTPNIFTLNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAAN 259
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+ M GC + +Y I +C A+R+ +A L +M E P TY +
Sbjct: 260 AIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFAL 319
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ N++ M C PN + L+ LC+ + A ++ N M+EKG
Sbjct: 320 CQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCE-DSNFDDAKKILNGMLEKGLIPS 378
Query: 185 ILVSDVLFDLLCDMG 199
++ + L D C G
Sbjct: 379 VVTYNALIDGYCKKG 393
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 58/149 (38%), Gaps = 31/149 (20%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ PD + Y ID Y + ++ A+ I+++M + P +Y+ +I L +
Sbjct: 650 MNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLS-NAK 708
Query: 61 PDKAR------------------------------DVLKEMKEYGCYPDAAAYNAAIRNY 90
P + D+ +M E+GC P+A Y I
Sbjct: 709 PKEVSSSSELSDLSSGVASNDFSNCWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGL 768
Query: 91 CIAKRLRDASGLMDEMVEKGLSPNATTYN 119
C L A L D M EKG SPN YN
Sbjct: 769 CKVGCLEVAHRLFDHMKEKGQSPNEDIYN 797
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 65/171 (38%), Gaps = 29/171 (16%)
Query: 1 MREMGVKPDIVSYNCLID----------------------VYCKD-----RQVEKAYKI- 32
M E+G +P +Y+CLI V D R+V+ + +
Sbjct: 685 MHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNCWRRVDYEFTLD 744
Query: 33 -VEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYC 91
KM + +P+ +Y I GL VG + A + MKE G P+ YN+ + C
Sbjct: 745 LFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSC 804
Query: 92 IAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMM 142
+A +D M+E P+ + L Y + + ++C +
Sbjct: 805 QLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVFCSFL 855
>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 807
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 105/219 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV P++V+YN +I CK R V+KA I+ +M + PD ++Y ++I G +GQ
Sbjct: 237 MTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQ 296
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + KEM G P+ + + C R+ +A D M+ KG N +Y+
Sbjct: 297 WKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYST 356
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + L NL+ M+ G +PN LV + V A+ ++ DM ++G
Sbjct: 357 LLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRG 416
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
+L + C MG + +A F MI+KG +P+
Sbjct: 417 LNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPN 455
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 107/225 (47%), Gaps = 2/225 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVE-KMRDEDISP-DVISYTSIIGGLGLV 58
M E+G PD +SY+ ++ C D + + A I+ ++ P +V+ Y++++ GL
Sbjct: 165 MPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVHGLFKE 224
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
G+ +A D+ EM + G P+ YN+ I C A+ + A G++ +MV G+ P+ TY
Sbjct: 225 GKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPDNVTY 284
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
N + + + ++ M G +PNT +C V + ++E A + ++ M+
Sbjct: 285 NTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLA 344
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
KG I+ L G LV+ F M+ G P+Q F
Sbjct: 345 KGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVF 389
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 108/226 (47%), Gaps = 3/226 (1%)
Query: 1 MREM---GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGL 57
+R+M GV+PD V+YN LI Y Q ++A ++ ++M + P+ ++ ++ + L
Sbjct: 269 LRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCK 328
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
G+ ++AR+ M G + +Y+ + Y A L D S L + MV G+ PN
Sbjct: 329 HGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHV 388
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
+N+ + +R + ++ M G P+ + + ++ R ++ A+ +N M+
Sbjct: 389 FNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMI 448
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+KG V L C G LV+AE+ E+ KG P +SF
Sbjct: 449 DKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSF 494
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 123/291 (42%), Gaps = 40/291 (13%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P + +Y+ LID C+ R+++ A+ + + + DVI +S++ GL + D+A DV
Sbjct: 101 PTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVDV 160
Query: 68 L-KEMKEYGCYPDAAAYNAAIRNYCIAKR------------------------------- 95
L M E GC PDA +Y+ +++ C R
Sbjct: 161 LFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVHG 220
Query: 96 ------LRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPN 149
+ +A L EM ++G+ PN TYN + + + + +M+G G P+
Sbjct: 221 LFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPD 280
Query: 150 TQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFL 209
+ L+ + + A++++ +M +G + LC G++ EA + F
Sbjct: 281 NVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFD 340
Query: 210 EMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFGPSMIPKREEY 260
M+ KGHK + +S+ + A + NL N M G ++P + +
Sbjct: 341 SMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDG--IVPNQHVF 389
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 99/215 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G+ PD+++Y +I +C+ ++ A M D+ + P+ Y +I G G
Sbjct: 412 MQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGD 471
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA +++ E++ G P ++ + I + C R+ +A + D ++ G + +
Sbjct: 472 LVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTS 531
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + ++ ++ M+ G P+ + LV C + +++ L L+ +++ KG
Sbjct: 532 LIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKG 591
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
++ D L G+ A++ F EMIE G
Sbjct: 592 VKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESG 626
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 115/264 (43%), Gaps = 2/264 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV+P+ Y CLI +C + KA ++V ++R++ + P ++S+ S+I L G+
Sbjct: 447 MIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGR 506
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A+ + + G D + + I YC+ ++ +A + D MV G+ P+ TY
Sbjct: 507 VFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGT 566
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + L+ ++ G P T + ++ + A +++ +M+E G
Sbjct: 567 LVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESG 626
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
I +L LC EA F ++ K V + + M A ++E +
Sbjct: 627 IAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAE 686
Query: 241 NLSNKMALFGPSMIPKREEYLAEM 264
L + +G ++P + Y M
Sbjct: 687 GLFASIPDYG--LVPTVQTYTIMM 708
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 106/242 (43%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ P+ +N L++ Y K V +A I E M+ ++PDV++Y ++I +G D A
Sbjct: 381 GIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDA 440
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
D M + G P+ A Y I+ +C L A L+ E+ KGL P ++
Sbjct: 441 MDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINH 500
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + ++ ++ TG + L+ K+ A ++ + MV G
Sbjct: 501 LCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPD 560
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSN 244
I+ L + C G++ + F E++ KG KP+ ++ I + A + A + +
Sbjct: 561 IVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQ 620
Query: 245 KM 246
+M
Sbjct: 621 EM 622
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 98/223 (43%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G K +I+SY+ L+ Y + + M + I P+ + ++ G G
Sbjct: 342 MLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGM 401
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + ++M++ G PD Y A I +C + DA + M++KG+ PN Y
Sbjct: 402 VREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQC 461
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ F DL + L + G P S L+ ++ +V A ++++ ++ G
Sbjct: 462 LIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTG 521
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + + L D C +GK+ EA + M+ G +P V++
Sbjct: 522 EKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTY 564
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/204 (19%), Positives = 93/204 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G++PDIV+Y L++ CK+ +++ + ++ + + P +Y I+ GL G+
Sbjct: 552 MVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGR 611
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A+++ +EM E G Y+ + C +A + ++ + + N+
Sbjct: 612 TAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNI 671
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + L+ + G +P Q+ +++ ++ VE A +++ M++ G
Sbjct: 672 MISKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSG 731
Query: 181 FGSYILVSDVLFDLLCDMGKLVEA 204
+V+ L + G++V+A
Sbjct: 732 LSPTSHFINVIVRTLLEKGEIVKA 755
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 75/172 (43%), Gaps = 2/172 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+ I +Y+ L+ C++ E+A + +K+ ++ D++ +I + +
Sbjct: 622 MIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARR 681
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A + + +YG P Y + N + +A G+ M++ GLSP + N+
Sbjct: 682 REEAEGLFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGLSPTSHFINV 741
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKL--CKRQEKVEIAL 170
R ++ + CR+ G L + L+ L CK + + + L
Sbjct: 742 IVRTLLEKGEIVKAGIYMCRVDGKSILFEASTASMLLSLFSCKGKHREHLNL 793
>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
Length = 497
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 117/251 (46%), Gaps = 33/251 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G +P++V+YN LID CK+ + ++A ++ E M+ + SP +++Y +++ GL G+
Sbjct: 1 MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60
Query: 61 PDKARDVLKEMKEYG---------------------------------CYPDAAAYNAAI 87
++A + +EM + C P+ Y+ I
Sbjct: 61 LERAMALFQEMLDRRSHDVISFNILVTGLCRAGKIETALEFFRKMDDRCSPNVITYSVLI 120
Query: 88 RNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCL 147
C A R+ A L++ M +G SP+ TY + + + ++W + M+ GC+
Sbjct: 121 DGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCV 180
Query: 148 PNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKS 207
PN + L+ R +V AL L DM +G ++ L D LC +G++ +A
Sbjct: 181 PNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAM 240
Query: 208 FLEMIEKGHKP 218
+MI+KG P
Sbjct: 241 LADMIDKGGTP 251
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 117/244 (47%), Gaps = 4/244 (1%)
Query: 1 MREM---GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGL 57
+REM G P++V+YN L+ C+ R+V A ++ M +P+V++Y ++I GL
Sbjct: 171 LREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCK 230
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
VG+ A +L +M + G PD YN I C A ++ ++ L+ V G+ P+ T
Sbjct: 231 VGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVT 290
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
Y+ SN L + L + GC P+ L+ + KV+ A L+ M
Sbjct: 291 YSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMT 350
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQ 236
G + ++ L D LC G++ EA M+ G PS +++ IK L +L +
Sbjct: 351 GDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLD 410
Query: 237 EALQ 240
EA++
Sbjct: 411 EAIE 414
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 107/216 (49%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P++++Y+ LID CK +V +A +++E M+ SPDVI+YT ++ GL + A +V
Sbjct: 111 PNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEV 170
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L+EM + GC P+ YN+ + C A+R+ DA LM +M +G +PN TY
Sbjct: 171 LREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCK 230
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
++ + + M+ G P+ L+ + ++V+ ++ L V G ++
Sbjct: 231 VGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVT 290
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ LC +L EA + L + +G P + +
Sbjct: 291 YSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILY 326
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 107/215 (49%), Gaps = 2/215 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+KPD+V+Y+ +I C+ ++++A +++ ++ PDVI Y+++I GL G+ D+A
Sbjct: 283 GIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEA 342
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
D+ + M GC D Y+ I C A R+ +A L+ MV G P+ TYN +
Sbjct: 343 FDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKG 402
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVE-IALQLWNDMVEKGFGS 183
N L + L M + C P+ + L+ R E+V+ AL + +M++ G
Sbjct: 403 LCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIP 462
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFL-EMIEKGHK 217
+ +L + L L E L +M++ G++
Sbjct: 463 DHITYSILLEGLKKSKDLHELRHLVLDQMVQLGYR 497
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 106/226 (46%), Gaps = 3/226 (1%)
Query: 1 MREM---GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGL 57
MR+M G P++V+Y LID CK +V+ A ++ M D+ +PD++ Y +I GL
Sbjct: 206 MRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCK 265
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
Q D++ +L+ G PD Y++ I C + RL +A L+ + +G P+
Sbjct: 266 ADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVIL 325
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
Y+ + + +++LY M G GC + + L+ + +V+ A L MV
Sbjct: 326 YSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMV 385
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G + + L LCD+ L EA + EM PS V++
Sbjct: 386 RMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTY 431
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 95/183 (51%), Gaps = 2/183 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
++ G PD++ Y+ LID CK +V++A+ + E M + DV++Y+++I GL G+
Sbjct: 314 VKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGR 373
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A +L M G P YN+ I+ C L +A L++EM +P+A TYN+
Sbjct: 374 VDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNI 433
Query: 121 FFRVFYWSNDLRS-SWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKV-EIALQLWNDMVE 178
+ S + + + M+ G +P+ + L++ K+ + + E+ + + MV+
Sbjct: 434 LIHGMCRMERVDSAALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHLVLDQMVQ 493
Query: 179 KGF 181
G+
Sbjct: 494 LGY 496
>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
Length = 691
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 117/237 (49%), Gaps = 3/237 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MRE G++ + V++ LID +CK ++ A V MR I P V+ Y ++I G +VG+
Sbjct: 316 MRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGR 375
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+AR++L EM+ G PD Y+ I YC A L +M+EKG+ P+A TY+
Sbjct: 376 MDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSS 435
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
RV L + L+ M+ G P+ + L+ ++ VE AL L + MV+ G
Sbjct: 436 LIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAG 495
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQE 237
++ VL + L + +EA++ ++ + P+ + ALM K E
Sbjct: 496 VLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKY---DALMHCCRKAE 549
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 128/265 (48%), Gaps = 4/265 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ PD+V++ LI V CK +E A +V +MR+ + + +++T++I G G
Sbjct: 281 MTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGF 340
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A ++ M++ P YNA I YC+ R+ +A L+ EM KGL P+ TY+
Sbjct: 341 LDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYST 400
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + D S++ L +M+ G LP+ + L+++ ++++ A L+ +M++ G
Sbjct: 401 IISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLG 460
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEAL 239
L D C G + A +M++ G P V++ I L + A EA
Sbjct: 461 LQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQ 520
Query: 240 QNLSNKMALFGPSMIPKREEYLAEM 264
Q L L+ IP +Y A M
Sbjct: 521 QLL---FKLYHEEPIPANTKYDALM 542
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 110/226 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G P++V+YN L+ + + +V+ A ++V M D + P+++++ S++ G+ G+
Sbjct: 176 MRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGK 235
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ AR V EM G PD +YN + YC A +A + EM +KG+ P+ T+
Sbjct: 236 MEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTS 295
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
V + +L + L +M G N + L+ ++ ++ AL M +
Sbjct: 296 LIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCR 355
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ + L + C +G++ EA + EM KG KP V++ I
Sbjct: 356 IKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTI 401
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 104/222 (46%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV P++ +YN LI C ++A I+ MR P+V++Y +++ G+ D A
Sbjct: 145 GVAPNVYTYNILIRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGA 204
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++ M + G P+ +N+ + C A ++ DA + DEM+ +GL+P+ +YN
Sbjct: 205 ERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGG 264
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + + +++ M G +P+ + L+ + + +E A+ L M E+G
Sbjct: 265 YCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMN 324
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ L D C G L +A + M + KPS V + +
Sbjct: 325 EVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNAL 366
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 104/220 (47%), Gaps = 3/220 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G P +++YN ++ + D + A + + M + ++P+V +Y +I L G +A
Sbjct: 111 GYVPSVLAYNAVL-LALSDASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEA 169
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+L++M+ GC P+ YN + + A + A L+ M++ GL PN T+N
Sbjct: 170 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNG 229
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEKGFGS 183
+ + + ++ MM G P+ S LV CK E AL ++ +M +KG
Sbjct: 230 MCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHE-ALSVFAEMTQKGIMP 288
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ L ++C G L A +M E+G + ++V+F
Sbjct: 289 DVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTF 328
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 103/262 (39%), Gaps = 50/262 (19%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+KPD+V+Y+ +I YCK+ A+++ ++M ++ + PD I+Y+S+I L +
Sbjct: 386 MEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKR 445
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A + K M + G PD Y + I +C + A L D+MV+ G+ P+ TY++
Sbjct: 446 LSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSV 505
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQE---------------- 164
S + L ++ +P L+ C++ E
Sbjct: 506 LINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGL 565
Query: 165 ----------------------------------KVEIALQLWNDMVEKGFGSYILVSDV 190
V AL M+++GF +
Sbjct: 566 MNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTIS 625
Query: 191 LFDLLCDMGKLVEAEKSFLEMI 212
L L + G +VEA++ +++
Sbjct: 626 LIRGLFENGMVVEADQVIQQLL 647
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 1/204 (0%)
Query: 43 PDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGL 102
P V++Y +++ L AR M G P+ YN IR C ++A +
Sbjct: 114 PSVLAYNAVLLALS-DASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSI 172
Query: 103 MDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKR 162
+ +M G PN TYN F+ + ++ + L M+ G PN + +V +
Sbjct: 173 LRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCK 232
Query: 163 QEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
K+E A +++++M+ +G + + L C G EA F EM +KG P V+
Sbjct: 233 AGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVT 292
Query: 223 FRRIKALMELANKQEALQNLSNKM 246
F + +M A E L +M
Sbjct: 293 FTSLIHVMCKAGNLEWAVTLVRQM 316
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/234 (20%), Positives = 94/234 (40%), Gaps = 56/234 (23%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGL----- 55
M ++G++PD +Y LID +CK+ VE+A + +KM + PDV++Y+ +I GL
Sbjct: 456 MIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSAR 515
Query: 56 ------------------------------------------------GLVGQPDKARDV 67
GL+ + DK V
Sbjct: 516 AMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADK---V 572
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
+ M + D + Y+ I +C A + A +M+++G +PN+T+ R +
Sbjct: 573 YQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLFE 632
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
+ + + + +++ L + ++ L+ L + V+ L + + M + G
Sbjct: 633 NGMVVEADQVIQQLLNCCSLADAEASKALIDLNLNEGNVDAVLDVLHGMAKDGL 686
>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
Length = 722
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 117/246 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G++PD +YN I + KA+++ E M E IS D ++Y +I GL G
Sbjct: 474 MLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGN 533
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A+D+ +M G PD Y I +C LR+A +M+ GL+P+A TY +
Sbjct: 534 LNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTV 593
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + +L S++ + +M+ G PN + L+ R + ++A + +++M+E+G
Sbjct: 594 FIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERG 653
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+L D C G +A + + EM + G P ++ + + + + A++
Sbjct: 654 LVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHPDYLTHKALFKGFDEGHMNHAIE 713
Query: 241 NLSNKM 246
L N +
Sbjct: 714 YLENAV 719
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 107/223 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR MG++PD+++YN L++ YCK +++A + +R ++P V++Y +I G +G
Sbjct: 369 MRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGD 428
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++AR + +EM E GC PD Y ++ A L A DEM+ KGL P+ YN
Sbjct: 429 LEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNT 488
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
R + ++ L MM G +T + L+ + + A L MV G
Sbjct: 489 RIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNG 548
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ L C+ G L EA K F +MI G PS V++
Sbjct: 549 LQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTY 591
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 105/223 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ P +V+YN +I + QVE A +MR + PDVI+Y S++ G G
Sbjct: 334 MENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGS 393
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + +++ G P YN I YC L +A L +EMVE+G P+ TY +
Sbjct: 394 LKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTI 453
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + L + + M+ G P+ + ++ + A +L M+ +G
Sbjct: 454 LMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEG 513
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
S + ++L D LC G L +A+ ++M+ G +P +++
Sbjct: 514 ISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITY 556
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 101/259 (38%), Gaps = 36/259 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV PD+ N ++ V + + + +M I P +++Y +++ G+
Sbjct: 193 MASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFLKEGR 252
Query: 61 PDKARDVLKEM--KEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMD-------------- 104
DK +LKEM + GC P+ +N I L +A+ +++
Sbjct: 253 NDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSKKASSFTYN 312
Query: 105 --------------------EMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGT 144
EM +G+ P TYN S + ++ + M
Sbjct: 313 PLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAM 372
Query: 145 GCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEA 204
G P+ + L+ + ++ AL L+ D+ G +L ++L D C +G L EA
Sbjct: 373 GLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEA 432
Query: 205 EKSFLEMIEKGHKPSQVSF 223
+ EM+E+G P ++
Sbjct: 433 RRLKEEMVEQGCLPDVCTY 451
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 81/205 (39%), Gaps = 17/205 (8%)
Query: 38 DEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLR 97
D D +PD S + EM +G PD N +R A R
Sbjct: 174 DRDATPDTCSTLCL--------------SAFHEMASHGVAPDVKDCNRVLRVLSDAARWD 219
Query: 98 DASGLMDEMVEKGLSPNATTYNLFFRVFY--WSNDLRSSWNLYCRMMGTGCLPNTQSCMF 155
D + EM++ G+ P+ TYN F ND + G+GCLPN +
Sbjct: 220 DICAVHAEMLQLGIEPSIVTYNTLLDSFLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNV 279
Query: 156 LVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
++ R+ +E A ++ M S + ++ LL G + +A+ LEM +G
Sbjct: 280 VITGLARKGDLEEAAEMVEGMRLSKKASSFTYNPLITGLLAK-GFVKKADDLQLEMENEG 338
Query: 216 HKPSQVSFRRIKALMELANKQEALQ 240
P+ V++ + + + + EA Q
Sbjct: 339 IMPTVVTYNAMIHGLLQSGQVEAAQ 363
>gi|356512664|ref|XP_003525037.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74750-like [Glycine max]
Length = 873
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 110/219 (50%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
R+ G + D +Y ++ + + R+ + K++E+M + P+V++Y +I G
Sbjct: 369 RQPGFRHDGHTYTTMVGILGRARRFDSISKLLEQMVKDGCQPNVVTYNRLIHCYGCANYL 428
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
+A +V EM+E GC PD Y I + A + A + M E GLSP+ TY++
Sbjct: 429 KEALNVFNEMQEVGCEPDRVTYCTLIDIHAKAGFIDVAMSMYKRMQEAGLSPDTFTYSVI 488
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
+ +L ++ L+C M+ GC+PN + ++ L + E+AL+L++DM GF
Sbjct: 489 INCLGKAGNLAAAHWLFCEMVEHGCVPNLVTYNIMIALQAKARNYEMALKLYHDMQNAGF 548
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQ 220
+ ++ + L G L EAE F+EM +K P +
Sbjct: 549 QPDKVTYSIVMEALGHCGYLEEAESVFVEMQQKNWVPDE 587
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 99/219 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E+G +PD V+Y LID++ K ++ A + ++M++ +SPD +Y+ II LG G
Sbjct: 438 MQEVGCEPDRVTYCTLIDIHAKAGFIDVAMSMYKRMQEAGLSPDTFTYSVIINCLGKAGN 497
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A + EM E+GC P+ YN I A+ A L +M G P+ TY++
Sbjct: 498 LAAAHWLFCEMVEHGCVPNLVTYNIMIALQAKARNYEMALKLYHDMQNAGFQPDKVTYSI 557
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
L + +++ M +P+ LV L + VE A + + M+ G
Sbjct: 558 VMEALGHCGYLEEAESVFVEMQQKNWVPDEPVYGLLVDLWGKAGNVEKASEWYQAMLNAG 617
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
+ + L + +L +A M+ G +PS
Sbjct: 618 LLPNVPTCNSLLSAFLRLHRLPDAYNLVQSMVALGLRPS 656
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 76/167 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G P++V+YN +I + K R E A K+ M++ PD ++Y+ ++ LG G
Sbjct: 508 MVEHGCVPNLVTYNIMIALQAKARNYEMALKLYHDMQNAGFQPDKVTYSIVMEALGHCGY 567
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A V EM++ PD Y + + A + AS M+ GL PN T N
Sbjct: 568 LEEAESVFVEMQQKNWVPDEPVYGLLVDLWGKAGNVEKASEWYQAMLNAGLLPNVPTCNS 627
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVE 167
F + L ++NL M+ G P+ Q+ L+ C +
Sbjct: 628 LLSAFLRLHRLPDAYNLVQSMVALGLRPSLQTYTLLLSCCTEAQPAH 674
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 82/185 (44%), Gaps = 2/185 (1%)
Query: 72 KEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDL 131
++ G D Y + A+R S L+++MV+ G PN TYN + +N L
Sbjct: 369 RQPGFRHDGHTYTTMVGILGRARRFDSISKLLEQMVKDGCQPNVVTYNRLIHCYGCANYL 428
Query: 132 RSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVL 191
+ + N++ M GC P+ + L+ + + +++A+ ++ M E G V+
Sbjct: 429 KEALNVFNEMQEVGCEPDRVTYCTLIDIHAKAGFIDVAMSMYKRMQEAGLSPDTFTYSVI 488
Query: 192 FDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKM--ALF 249
+ L G L A F EM+E G P+ V++ + AL A E L + M A F
Sbjct: 489 INCLGKAGNLAAAHWLFCEMVEHGCVPNLVTYNIMIALQAKARNYEMALKLYHDMQNAGF 548
Query: 250 GPSMI 254
P +
Sbjct: 549 QPDKV 553
>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
Length = 1115
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 113/244 (46%), Gaps = 1/244 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G PD+V+Y LID C R+++ A + KM+ PD ++Y +++ G
Sbjct: 290 MDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGH 349
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DK + EM+ G PD + + C A R+ +A L+D M ++G+ PN TYN
Sbjct: 350 LDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNT 409
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+N L + +L+ M G P + + L+ + AL+ + M +G
Sbjct: 410 LISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARG 469
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEAL 239
I+ + L +MG+L EA+ F E+ G P V++ +K ++ EA+
Sbjct: 470 IAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAI 529
Query: 240 QNLS 243
+ LS
Sbjct: 530 KLLS 533
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 112/239 (46%), Gaps = 1/239 (0%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
+E+GVKP + YN LID + + VE A+ + E+M+ +PD +Y S+I G G+
Sbjct: 782 KELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKI 841
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
++ D+ EM GC P+ YN I N + RL A L +V SP T+
Sbjct: 842 NELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPL 901
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
S L + ++ M+ GC PN+ LV + V+ A + + MV++G
Sbjct: 902 IDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGI 961
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEAL 239
+ +L D+LC G++ +A F ++ + G P V++ I L +EAL
Sbjct: 962 RPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEAL 1020
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 83/152 (54%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G++PD+ SY L+D+ C +V+ A EK++ + PD+++Y +I GLG +
Sbjct: 956 MVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQR 1015
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A + EM+ G PD YN+ I N I + +A + +E+ GL PN TYN
Sbjct: 1016 TEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNA 1075
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS 152
R + S + ++ +Y +MM GC PNT +
Sbjct: 1076 LIRGYTLSGNSELAYGIYKKMMVGGCDPNTGT 1107
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 106/226 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +GV+P +Y LID + K KA + EKM+ I+P++++ + + L +G+
Sbjct: 430 MESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGR 489
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A+ + E+K G PD+ YN ++ Y ++ +A L+ EM + P+ N
Sbjct: 490 LGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINS 549
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
Y + + +W ++CRM P + L+ ++ +++ A+QL+ M G
Sbjct: 550 LIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHG 609
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + L D LC ++ A K F +M +P ++F I
Sbjct: 610 CSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTI 655
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 105/226 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ GV P++ +YN LI + +++ A + M + P +Y +I G G
Sbjct: 395 MRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGH 454
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
P KA + ++MK G P+ A NA++ + RL +A + +E+ GL+P++ TYN+
Sbjct: 455 PGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNM 514
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + + L M C P+ L+ + +VE A Q++ M E
Sbjct: 515 MMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMN 574
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ ++L L G++ +A + F M G P+ ++F +
Sbjct: 575 LAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTL 620
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 114/250 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G KP+ ++YN +I K +++KA + + D SP ++ +I GL G+
Sbjct: 851 MLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGR 910
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A ++ M YGC P++A YN + Y + A MV++G+ P+ +Y +
Sbjct: 911 LDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTI 970
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + + + + ++ G P+ + ++ R ++ E AL L+++M +G
Sbjct: 971 LVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRG 1030
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ + L L +G + EA K + E+ G KP+ ++ + L+ E
Sbjct: 1031 IVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAY 1090
Query: 241 NLSNKMALFG 250
+ KM + G
Sbjct: 1091 GIYKKMMVGG 1100
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 111/256 (43%), Gaps = 7/256 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G PD +YN LID + K ++ + + + ++M P+ I+Y +I L +
Sbjct: 816 MKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNR 875
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA D+ + P + I + RL DA + D MV G PN+ YN+
Sbjct: 876 LDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNI 935
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + ++ + RM+ G P+ +S LV + +V+ AL + + + G
Sbjct: 936 LVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAG 995
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR------IKALMELAN 234
++ +++ + L + EA F EM +G P ++ I ++E A
Sbjct: 996 LDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAG 1055
Query: 235 K-QEALQNLSNKMALF 249
K E LQ + K +F
Sbjct: 1056 KIYEELQFIGLKPNVF 1071
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 106/241 (43%), Gaps = 1/241 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ KPD V+Y L+D + ++K KI +M + +PDV+++T ++ L G+
Sbjct: 325 MKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGR 384
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A D+L M++ G P+ YN I A RL DA L M G+ P A TY L
Sbjct: 385 INEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYIL 444
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
S + + +M G PN +C + ++ A ++N++ G
Sbjct: 445 LIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSG 504
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
+ +++ +G++ EA K EM + +P + I L + +EA
Sbjct: 505 LAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAW 564
Query: 240 Q 240
Q
Sbjct: 565 Q 565
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 96/219 (43%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+KP + +++ L+ K R ++ ++E+M + P++ +YT I LG G+ D+A
Sbjct: 224 GLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEA 283
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++K M + GC PD Y I C A++L DA L +M P+ TY
Sbjct: 284 YRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDK 343
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
F L ++ M G P+ + LV + ++ A L + M ++G
Sbjct: 344 FSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPN 403
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + L L +L +A F M G +P+ ++
Sbjct: 404 LHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTY 442
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 70/118 (59%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+++ G+ PD+V+YN +I+ + ++ E+A + +M++ I PD+ +Y S+I LG+VG
Sbjct: 991 LKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGM 1050
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
++A + +E++ G P+ YNA IR Y ++ A G+ +M+ G PN T+
Sbjct: 1051 IEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTF 1108
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 85/176 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
++ G+ PD V+YN ++ Y K QV++A K++ +M PDVI S+I L G+
Sbjct: 500 LKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGR 559
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A + M+E P YN + +++ A L + M G SPN T+N
Sbjct: 560 VEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNT 619
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDM 176
++++ + ++ +M C P+ + ++ +Q +++ A+ L++ M
Sbjct: 620 LLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQM 675
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 106/226 (46%), Gaps = 4/226 (1%)
Query: 2 REMGVKPDIV----SYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGL 57
+ +G P++V + N ++++ R+VE + + M+ + I +V +Y I L +
Sbjct: 112 KSVGELPNVVHTTETCNHMLEILRVHRRVEDMAFVFDLMQRQIIRRNVDTYLIIFKSLFI 171
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
G +A L++M+E G +A +YN I + ++A + MV +GL P+ T
Sbjct: 172 RGGLRQAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKT 231
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
++ ++++ L M G PN + +++ R K++ A ++ M
Sbjct: 232 FSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMD 291
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ G G ++ VL D LC KL +A F +M HKP +V++
Sbjct: 292 DDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTY 337
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 103/255 (40%), Gaps = 37/255 (14%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKM---------RD--EDISPDVISYT----S 50
++PD V+ L+ K Q+E A++I E R ED+ +++ +
Sbjct: 679 LRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVMGGILTEAGTEKA 738
Query: 51 IIGGLGLV---------------------GQPDKARDV-LKEMKEYGCYPDAAAYNAAIR 88
I+ G LV + AR+V +K KE G P YN I
Sbjct: 739 ILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLID 798
Query: 89 NYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLP 148
+ + A L +EM G +P+ TYN S + ++LY M+ GC P
Sbjct: 799 GFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKP 858
Query: 149 NTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSF 208
NT + ++ + +++ A+ L+ ++V F L D L G+L +A + F
Sbjct: 859 NTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMF 918
Query: 209 LEMIEKGHKPSQVSF 223
M+ G +P+ +
Sbjct: 919 DGMVHYGCRPNSAIY 933
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/279 (18%), Positives = 107/279 (38%), Gaps = 38/279 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P+ +++N L+D CK+ +V+ A K+ KM + PDV+++ +II G Q
Sbjct: 605 MNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQ 664
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDA--------------------- 99
A + +MK+ PD + + ++ DA
Sbjct: 665 IKNAIWLFHQMKKL-LRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWE 723
Query: 100 ---SGLMDE------------MVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMG- 143
G++ E +V + + + + +V + N++ +
Sbjct: 724 DVMGGILTEAGTEKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKE 783
Query: 144 TGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVE 203
G P + L+ VE+A L+ +M G + L D GK+ E
Sbjct: 784 LGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINE 843
Query: 204 AEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNL 242
+ EM+ +G KP+ +++ + + + +N+ + +L
Sbjct: 844 LFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDL 882
>gi|255548471|ref|XP_002515292.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545772|gb|EEF47276.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 120/250 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G KPDIV++N +++ + +Q A K+ M+ + SPDV SYT +I L +
Sbjct: 258 MIDKGFKPDIVAHNIMLEGLLRSKQRSDAIKLFMVMKAKGPSPDVRSYTILIRYLCRQSK 317
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A + +EM + GC PDAA Y I + KR+ L+ EM E+G P+ TYN
Sbjct: 318 MEEAVEYFQEMIDSGCKPDAAVYTCLITGFGNRKRMDMVYDLLKEMKEEGCPPDGLTYNA 377
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++ + +Y +M +G P + ++K + E+ +W++M KG
Sbjct: 378 LIKLMTRLKMPDDAARIYKKMTQSGIEPTIHTYNMIMKSYFQTRNYEMGRAVWDEMSRKG 437
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
F VL L G+ EA K EM+EKG K Q+ + + A + + L+
Sbjct: 438 FCPDDNSYTVLIGGLISQGRSGEACKYLEEMLEKGMKAPQLDYNKFGADLSRGGNPDILE 497
Query: 241 NLSNKMALFG 250
L+ ++ G
Sbjct: 498 ELAQRLKFSG 507
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 104/226 (46%), Gaps = 1/226 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ K + + N L+D + + ++A + E ++ +P++ +YT ++ G V
Sbjct: 189 MKKYNYKVGVETINHLLDSLGRAKLGKEAQALFENLKGR-FTPNLRTYTVLLNGWCKVKN 247
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A V EM + G PD A+N + +K+ DA L M KG SP+ +Y +
Sbjct: 248 LMEAGSVWNEMIDKGFKPDIVAHNIMLEGLLRSKQRSDAIKLFMVMKAKGPSPDVRSYTI 307
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
R + + + + M+ +GC P+ L+ ++++++ L +M E+G
Sbjct: 308 LIRYLCRQSKMEEAVEYFQEMIDSGCKPDAAVYTCLITGFGNRKRMDMVYDLLKEMKEEG 367
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
L + L L+ + +A + + +M + G +P+ ++ I
Sbjct: 368 CPPDGLTYNALIKLMTRLKMPDDAARIYKKMTQSGIEPTIHTYNMI 413
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/261 (20%), Positives = 102/261 (39%), Gaps = 37/261 (14%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVE----------------------------------KAY 30
G + D +YN ++ + K RQ E KA
Sbjct: 124 GFEHDSRTYNSMMSILAKTRQFETVVSMLEEMGGKGVLTMDTFSIAMRAFAAAKERKKAV 183
Query: 31 KIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCY-PDAAAYNAAIRN 89
+ E M+ + V + ++ LG +A+ + + +K G + P+ Y +
Sbjct: 184 AMFELMKKYNYKVGVETINHLLDSLGRAKLGKEAQALFENLK--GRFTPNLRTYTVLLNG 241
Query: 90 YCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPN 149
+C K L +A + +EM++KG P+ +N+ S + L+ M G P+
Sbjct: 242 WCKVKNLMEAGSVWNEMIDKGFKPDIVAHNIMLEGLLRSKQRSDAIKLFMVMKAKGPSPD 301
Query: 150 TQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFL 209
+S L++ RQ K+E A++ + +M++ G V L + ++
Sbjct: 302 VRSYTILIRYLCRQSKMEEAVEYFQEMIDSGCKPDAAVYTCLITGFGNRKRMDMVYDLLK 361
Query: 210 EMIEKGHKPSQVSFRRIKALM 230
EM E+G P +++ + LM
Sbjct: 362 EMKEEGCPPDGLTYNALIKLM 382
>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
Length = 746
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 109/222 (49%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G +PD ++YN ++ C++ V A K+++ M E PDV +Y ++ L GQ ++A
Sbjct: 285 GFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEA 344
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ +L +M E GC PD +N I C RL +A L ++ KGLSP+ T+N+
Sbjct: 345 KGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINA 404
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
D + + L+ M +GC P+ + L+ K+ AL L +M G
Sbjct: 405 LCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRS 464
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + + D LC ++ EAE+ F +M +G + ++F +
Sbjct: 465 TVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTL 506
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 112/241 (46%), Gaps = 1/241 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+KPD+V++N L+ C+ QV A ++E+M ++PD ++T+++ G G
Sbjct: 176 MGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGS 235
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A V M E GC P N I YC R+ DA G + + + G P+ TYN
Sbjct: 236 IKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNT 295
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + + + + M+ G P+ + +V + ++E A + N MVE+G
Sbjct: 296 FVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERG 355
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEAL 239
I + L LC +L EA ++ KG P +F I AL ++ + Q AL
Sbjct: 356 CLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLAL 415
Query: 240 Q 240
+
Sbjct: 416 R 416
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 110/227 (48%), Gaps = 2/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M EMG P V+ N LI+ YCK +VE A +++ PD I+Y + + GL G
Sbjct: 246 MLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGH 305
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A V+ M + G PD YN + C +L +A G++++MVE+G P+ TT+N
Sbjct: 306 VGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNT 365
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
N L + +L ++ G P+ + L+ LCK + ++AL+L+ +M
Sbjct: 366 LIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDP-QLALRLFEEMKSS 424
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G + + L D LC +GKL +A EM G S V++ I
Sbjct: 425 GCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTI 471
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 118/248 (47%), Gaps = 4/248 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ PD+ ++N LI+ CK + A ++ E+M+ +PD ++Y ++I L +G+ KA
Sbjct: 390 GLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKA 449
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
D+LKEM+ GC YN I C R+ +A + D+M +G+S NA T+N
Sbjct: 450 LDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDG 509
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
+ + L +M+ G PN + L CK Q ++ A + M GF
Sbjct: 510 LCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCK-QGDIKKAADILQTMTANGFEV 568
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNL 242
++ L + LC G+ A K M KG + + ++ I++L N ++A+ NL
Sbjct: 569 DVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAM-NL 627
Query: 243 SNKMALFG 250
+M G
Sbjct: 628 FREMTEVG 635
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 113/227 (49%), Gaps = 2/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G PD+ +YN +++ CK+ Q+E+A I+ +M + PD+ ++ ++I L +
Sbjct: 316 MVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNR 375
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A D+ +++ G PD +N I C + A L +EM G +P+ TYN
Sbjct: 376 LEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNT 435
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
L + +L M GC +T + ++ LCK+ ++E A ++++ M +
Sbjct: 436 LIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKM-RIEEAEEVFDQMDLQ 494
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G + + L D LC ++ +A + +MI +G +P+ +++ I
Sbjct: 495 GISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSI 541
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 103/224 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G PD V+YN LID C ++ KA ++++M ++Y +II GL +
Sbjct: 421 MKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMR 480
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A +V +M G +A +N I C KR+ DA+ L+ +M+ +GL PN TYN
Sbjct: 481 IEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNS 540
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ D++ + ++ M G + + L+ + + ++AL+L M KG
Sbjct: 541 ILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKG 600
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
+ + + L +A F EM E G P +++
Sbjct: 601 MRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVGEPPDAFTYK 644
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 77/155 (49%), Gaps = 1/155 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G++P+ ++YN ++ YCK ++KA I++ M DV++Y ++I GL G+ A
Sbjct: 530 GLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVA 589
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR- 123
+L+ M+ G AYN I++ RDA L EM E G P+A TY + FR
Sbjct: 590 LKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVGEPPDAFTYKIVFRG 649
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK 158
+ +R +++ M+ G +P S L +
Sbjct: 650 LCRGGGSIREAFDFLLEMVDKGFIPEFSSFRMLAE 684
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 96/225 (42%), Gaps = 2/225 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDE--DISPDVISYTSIIGGLGLV 58
MR G + + + ++ Y + + A +V D I D + Y ++ L
Sbjct: 104 MRREGHQVRVGVVHSFLESYARQQLFVDAVDLVLNQLDPLFGIQADTVVYNHLLNVLVEG 163
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
+ V EM E G PD +N ++ C A ++R A +++EM G++P+ TT+
Sbjct: 164 SKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTF 223
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
+ F ++++ + RM+ GC P + L+ + +VE AL +
Sbjct: 224 TTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIA 283
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
GF + + + LC G + A K M+++GH P ++
Sbjct: 284 NGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTY 328
>gi|449505568|ref|XP_004162510.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Cucumis sativus]
Length = 614
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 127/242 (52%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G++PD++SY I+ +C+++ K++ +M + P+VI++T I+ LG Q ++A
Sbjct: 364 GLEPDVISYTAFIEAHCREKDFRNVDKVLVQMEHKGCKPNVITFTIIMHALGKAKQINEA 423
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
V ++MK+ GC PD++ Y++ I A RL D ++++M ++G++P+ TYN
Sbjct: 424 LKVYEKMKKEGCVPDSSFYSSLIFILGKAGRLTDVKEIVEDMEKQGVTPDVLTYNTLISC 483
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ ++ L +M C P+ ++ L+K+ R++++++ L + M +
Sbjct: 484 ACAHSQEETALTLLLKMEEVSCKPDLKTYHPLLKMFCRKKRMKVLKFLLDHMFKNDVSIE 543
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSN 244
+L LC+ GKL A F EM+ K P +F+ +K +E + E ++ + N
Sbjct: 544 AGTYAILVRGLCENGKLHLACSFFGEMLSKAMVPKDSTFKMLKEELERKSMLEEMKIIEN 603
Query: 245 KM 246
M
Sbjct: 604 LM 605
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 98/214 (45%), Gaps = 1/214 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ D + N L+D K+ VE A+ + +++ I ++ S+ +I G + D+A
Sbjct: 295 GISTDTTAMNVLMDALVKEASVEDAHNVFRELKC-SIPFNLASFNVLIHGYCKAKKLDEA 353
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++ E+++ G PD +Y A I +C K R+ ++ +M KG PN T+ +
Sbjct: 354 WKIMGEVEKSGLEPDVISYTAFIEAHCREKDFRNVDKVLVQMEHKGCKPNVITFTIIMHA 413
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + + +Y +M GC+P++ L+ + + ++ ++ DM ++G
Sbjct: 414 LGKAKQINEALKVYEKMKKEGCVPDSSFYSSLIFILGKAGRLTDVKEIVEDMEKQGVTPD 473
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
+L + L C + A L+M E KP
Sbjct: 474 VLTYNTLISCACAHSQEETALTLLLKMEEVSCKP 507
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/250 (20%), Positives = 107/250 (42%), Gaps = 36/250 (14%)
Query: 12 SYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEM 71
SYN ++D+ K + +++V++M S + + + +I L G+ +A + +
Sbjct: 232 SYNSMVDILGKAKNFRLMWELVDEMNHLAGSVSLETMSKVIRRLARAGRHQEAIHAFRNI 291
Query: 72 KEYGCYPDA----------------------------------AAYNAAIRNYCIAKRLR 97
++YG D A++N I YC AK+L
Sbjct: 292 EKYGISTDTTAMNVLMDALVKEASVEDAHNVFRELKCSIPFNLASFNVLIHGYCKAKKLD 351
Query: 98 DASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV 157
+A +M E+ + GL P+ +Y F D R+ + +M GC PN + ++
Sbjct: 352 EAWKIMGEVEKSGLEPDVISYTAFIEAHCREKDFRNVDKVLVQMEHKGCKPNVITFTIIM 411
Query: 158 KLCKRQEKVEIALQLWNDMVEKG-FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGH 216
+ +++ AL+++ M ++G S ++F +L G+L + ++ +M ++G
Sbjct: 412 HALGKAKQINEALKVYEKMKKEGCVPDSSFYSSLIF-ILGKAGRLTDVKEIVEDMEKQGV 470
Query: 217 KPSQVSFRRI 226
P +++ +
Sbjct: 471 TPDVLTYNTL 480
>gi|15219049|ref|NP_175673.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207559|sp|Q9SSR6.1|PPR78_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g52640, mitochondrial; Flags: Precursor
gi|5903042|gb|AAD55601.1|AC008016_11 Contains 2 PF|01535 DUF domains [Arabidopsis thaliana]
gi|45773940|gb|AAS76774.1| At1g52640 [Arabidopsis thaliana]
gi|62320530|dbj|BAD95108.1| hypothetical protein [Arabidopsis thaliana]
gi|332194712|gb|AEE32833.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 523
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 118/247 (47%), Gaps = 1/247 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E D+++YN L+D CK V+ YK+ ++M + + PD S+ I G
Sbjct: 234 MLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGD 293
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A VL MK Y P+ +N I+ C +++ DA L+DEM++KG +P+ TYN
Sbjct: 294 VHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNS 353
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++ + L RM T CLP+ + ++KL R + + A ++W M E+
Sbjct: 354 IMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERK 413
Query: 181 FGSYILVSDVLFD-LLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
F + V+ L+ GKL EA + F MI++G P + ++ + + + +
Sbjct: 414 FYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEMLRNRLVGWGQMDVV 473
Query: 240 QNLSNKM 246
L+ KM
Sbjct: 474 DVLAGKM 480
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 101/230 (43%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+KP + + L+ C + V A + K + I P +Y+ ++ G +
Sbjct: 164 MVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRD 223
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
AR V EM E C D AYNA + C + + + EM GL P+A ++ +
Sbjct: 224 ASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAI 283
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + + D+ S++ + RM +PN + ++K + EKV+ A L ++M++KG
Sbjct: 284 FIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKG 343
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALM 230
+ + CD ++ A K M P + ++ + L+
Sbjct: 344 ANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLL 393
>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900 [Vitis vinifera]
Length = 900
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 118/257 (45%), Gaps = 12/257 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+++ GV P + YN LI+ CKD ++++A + M + + P+ ++Y+ +I G+
Sbjct: 346 VKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGK 405
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A L +M E G Y++ I +C +LR A L DEM+ GL PN Y
Sbjct: 406 LDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTS 465
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+ +L +++ LY M G G PNT + L+ LC E A +L+ +MVE
Sbjct: 466 LISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAE-ANKLFGEMVEW 524
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR----------RIKAL 229
+ +VL + C G V A + EM+EKG P ++R R+
Sbjct: 525 NVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEA 584
Query: 230 MELANKQEALQNLSNKM 246
E N + Q N+M
Sbjct: 585 REFMNDLQGEQQKLNEM 601
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 106/224 (47%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ P+ V+Y+ LID +CK +++ A + KM + I V Y+S+I G +G+
Sbjct: 381 MGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGK 440
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A+ + EM G P+ Y + I YC L +A L EM KG+SPN T+
Sbjct: 441 LRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTA 500
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+N + + L+ M+ +PN + L++ CK V A +L ++MVEK
Sbjct: 501 LISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVR-AFELLDEMVEK 559
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G L LC G++ EA + ++ + K +++ F
Sbjct: 560 GLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCF 603
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 120/241 (49%), Gaps = 1/241 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E V P+ V+YN LI+ +CK+ +A++++++M ++ + PD +Y +I GL G+
Sbjct: 521 MVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGR 580
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR+ + +++ + ++A + YC RL DA EM+ +G++ + Y++
Sbjct: 581 VSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSV 640
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
D RS +L +M G P+ ++ + +++A LW+ MV +G
Sbjct: 641 LIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEG 700
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEAL 239
++ L + LC +G + +AE EM+ P+Q ++ + L N ++A+
Sbjct: 701 CLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAI 760
Query: 240 Q 240
Q
Sbjct: 761 Q 761
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 110/227 (48%), Gaps = 3/227 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G++PD V Y +ID K ++ A+ + + M E P+V++YT++I GL +G
Sbjct: 661 MHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGL 720
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA + +EM P+ Y + + A L D ++E G N TYN+
Sbjct: 721 MDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLE-GFLANTVTYNI 779
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEK 179
R F ++ + + M+ +G P+ S + + C+R + E A++LW M+ +
Sbjct: 780 LIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKE-AIKLWESMLNR 838
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G + + L C G+L +A + +M+ +G KP++ ++ +
Sbjct: 839 GVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSL 885
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 104/223 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ P I + + +++ + RQ A + +++ + PDV YT+++ L +
Sbjct: 171 MMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKD 230
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR+V+ M+ GC A YN IR C +R+ +A + + + KGL + TY
Sbjct: 231 FIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCT 290
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + M+ G +P+ + LV +++ + A L N + + G
Sbjct: 291 LVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFG 350
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ V + L + +C GKL EAE F M KG P+ V++
Sbjct: 351 VAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTY 393
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 104/224 (46%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G + +YN I CK+++V +A +I + + + DV +Y +++ GL V +
Sbjct: 241 MESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEE 300
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ +++ EM E+G P AA + + + A L++++ + G++P+ YN
Sbjct: 301 FEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNA 360
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEK 179
L + +L+ M G PN + L+ CKR K+++AL M E
Sbjct: 361 LINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRG-KLDVALHFLGKMTEV 419
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G + + L C +GKL A+ F EMI G KP+ V +
Sbjct: 420 GIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIY 463
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 97/225 (43%), Gaps = 4/225 (1%)
Query: 2 REM---GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLV 58
REM GV D+V Y+ LI + + ++++M D+ + PD + YT++I
Sbjct: 624 REMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKA 683
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
G A + M GC P+ Y A I C + A L EM+ PN TY
Sbjct: 684 GNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTY 743
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
F ++ + L+ ++ G L NT + L++ + +++ A ++ +M++
Sbjct: 744 ACFLDYLTSEGNIEKAIQLHDVLL-EGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMID 802
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G + + C G L EA K + M+ +G P V++
Sbjct: 803 SGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAY 847
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 53/92 (57%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ PD +SY+ +I YC+ +++A K+ E M + ++PD ++Y +I G + G+
Sbjct: 800 MIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGE 859
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCI 92
KA ++ +M G P+ A YN+ I C+
Sbjct: 860 LTKAFELRDDMMRRGVKPNRATYNSLIHGTCL 891
Score = 40.8 bits (94), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV PD V+YN LI C ++ KA+++ + M + P+ +Y S+I G L+
Sbjct: 835 MLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLMSS 894
Query: 61 PDKARD 66
D
Sbjct: 895 VSSTAD 900
>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Vitis vinifera]
Length = 772
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 116/250 (46%), Gaps = 2/250 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P+ V+YN LI CK+ QVE+A ++ + + I PDV ++ S+I GL L A ++
Sbjct: 384 PNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMEL 443
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
+EMK GC+PD YN I + C RL +A L+ EM G S N TYN F
Sbjct: 444 FEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCK 503
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+ + + ++ M G N + L+ LCK + +VE A QL + M+ +G
Sbjct: 504 NKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNR-RVEEAAQLMDQMLMEGLKPDKF 562
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKM 246
+ L C G + +A M G +P V++ + + A + E L +
Sbjct: 563 TYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTV 622
Query: 247 ALFGPSMIPK 256
L G + P+
Sbjct: 623 QLKGMVLAPQ 632
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 115/226 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G PDI +YN LI CK +VE+A +I+ +M D SP+ ++Y ++I L Q
Sbjct: 342 MLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQ 401
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A ++ + + G PD +N+ I+ C+ R A L +EM KG P+ TYN+
Sbjct: 402 VEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNM 461
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
L + +L M +GC N + L+ + +++E A +++++M +G
Sbjct: 462 LIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQG 521
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ + L D LC ++ EA + +M+ +G KP + ++ +
Sbjct: 522 ISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSL 567
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 115/226 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G PD +YN LID C ++E+A ++++M S +V++Y ++I G +
Sbjct: 447 MKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKR 506
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A ++ EM+ G + YN I C +R+ +A+ LMD+M+ +GL P+ TYN
Sbjct: 507 IEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNS 566
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + D++ + ++ M GC P++ + L+ + +VE+A +L + KG
Sbjct: 567 LLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKG 626
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + L + EA + F EM+EKG P V+++ +
Sbjct: 627 MVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVV 672
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 114/227 (50%), Gaps = 2/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G +PD ++N L++ C+ V+ A +I++ M E PD+ +Y S+I GL +G+
Sbjct: 307 MSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGE 366
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A ++L +M P+ YN I C ++ +A+ L + KG+ P+ T+N
Sbjct: 367 VEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNS 426
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEK 179
+ +N+ R + L+ M GC P+ + L+ LC R ++E AL L +M
Sbjct: 427 LIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRG-RLEEALSLLKEMESS 485
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G ++ + L D C ++ EAE+ F EM +G + V++ +
Sbjct: 486 GCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTL 532
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 116/249 (46%), Gaps = 11/249 (4%)
Query: 11 VSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKE 70
V+ N L+ YCK+ ++E+ +++M +E PD ++ S++ GL +G A ++L
Sbjct: 282 VTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDV 341
Query: 71 MKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSND 130
M + G PD YN+ I C + +A ++++M+ + SPN TYN N
Sbjct: 342 MLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQ 401
Query: 131 LRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDV 190
+ + L + G LP+ + L++ +A++L+ +M KG ++
Sbjct: 402 VEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNM 461
Query: 191 LFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF----------RRIKALMELANKQEALQ 240
L D LC G+L EA EM G + V++ +RI+ E+ ++ E LQ
Sbjct: 462 LIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEME-LQ 520
Query: 241 NLSNKMALF 249
+S + +
Sbjct: 521 GISRNVVTY 529
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 111/251 (44%), Gaps = 2/251 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+KPD+ ++N LI C+ Q+ A ++E+M +SPD ++T+++ G G
Sbjct: 202 MVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGN 261
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A + ++M GC N + YC R+ + +DEM +G P+ T+N
Sbjct: 262 MNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNS 321
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEK 179
++ + + M+ G P+ + L+ LCK E VE A+++ N M+ +
Sbjct: 322 LVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGE-VEEAVEILNQMILR 380
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
F + + L LC ++ EA + + KG P +F + + L N
Sbjct: 381 DFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLA 440
Query: 240 QNLSNKMALFG 250
L +M G
Sbjct: 441 MELFEEMKTKG 451
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 79/158 (50%), Gaps = 2/158 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+KPD +YN L+ +C+ ++KA IV+ M PD ++Y ++I GL G+ + A
Sbjct: 556 GLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELA 615
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR- 123
+L+ ++ G YN I+ KR +A L EM+EKG P+A TY + FR
Sbjct: 616 SRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRG 675
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LC 160
+ + + + M G LP+ S + L + LC
Sbjct: 676 LCSGGGPIGEAVDFLVEMTDKGFLPDFSSFLMLAEGLC 713
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 107/241 (44%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E G+K D +YN L++V +++ + +M I PDV ++ +I L Q
Sbjct: 169 EFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIR 228
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
A +++EM YG PD + ++ + + A + ++MV G + T N+
Sbjct: 229 PAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLV 288
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
+ + + M G P+ + LV R V+ AL++ + M+++GF
Sbjct: 289 HGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFD 348
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNL 242
I + L LC +G++ EA + +MI + P+ V++ + + + N+ E L
Sbjct: 349 PDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATEL 408
Query: 243 S 243
+
Sbjct: 409 A 409
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 82/178 (46%), Gaps = 3/178 (1%)
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
D+++E E+G DA YN + +L+ + MV +G+ P+ TT+N+ +
Sbjct: 164 DIMEE--EFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKAL 221
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
++ +R + + M G P+ ++ L++ + + AL++ MV G S
Sbjct: 222 CRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSN 281
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNL 242
+ +VL C G++ E EM +G +P + +F + L + + + AL+ L
Sbjct: 282 VTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEIL 339
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 1/119 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G +PD V+Y LI K +VE A +++ ++ + + +Y +I L +
Sbjct: 587 MTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKR 646
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCI-AKRLRDASGLMDEMVEKGLSPNATTY 118
+A + +EM E G PDA Y R C + +A + EM +KG P+ +++
Sbjct: 647 TSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTDKGFLPDFSSF 705
>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
Length = 798
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 115/258 (44%), Gaps = 36/258 (13%)
Query: 5 GVKPDIVSYNCLIDVYCKD-RQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
G PD+VSYN +I+ ++ RQ++ AY + ++M D+ +SPDV++Y SII L DK
Sbjct: 197 GYPPDVVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDK 256
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASG---------------------- 101
A VL M + G P+ +N+ + YC + + DA G
Sbjct: 257 AAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMG 316
Query: 102 -------------LMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLP 148
+ D MV++G PN+ TY + L +L M+ G P
Sbjct: 317 YLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQP 376
Query: 149 NTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSF 208
+ L+ + KV+ A+ L++ M +G + ++ D LC +GK+ +A F
Sbjct: 377 DHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQF 436
Query: 209 LEMIEKGHKPSQVSFRRI 226
+I +G P V FR +
Sbjct: 437 GRLISEGLTPDAVVFRNL 454
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 117/229 (51%), Gaps = 3/229 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ P+ + +N L++ CK+ V +A I + M D+ DVI+Y ++I G L G+ D+A
Sbjct: 478 GICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEA 537
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+L+ M G P+ YN I YC R+ DA L +M KG++P TY+ +
Sbjct: 538 AKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQG 597
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
+ + ++ LY M+ +G + + + L+ LC+ + AL+++ ++ F
Sbjct: 598 LFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQ-NNCTDDALRIFQNLYLIDFHL 656
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF-RRIKALME 231
+++ D L G+ EA+ F ++ +G P+ V++ +K+L+E
Sbjct: 657 ENRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIE 705
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 105/226 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G P+ +++N L+ YC + A + ++M + + PDV +Y +++G L G+
Sbjct: 264 MVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGR 323
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR + M + G P++A Y + Y L L+D MV G+ P+ +N+
Sbjct: 324 SMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNI 383
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + L+ +M G P+T + ++ KV+ A+ + ++ +G
Sbjct: 384 LIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEG 443
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+V L LC K +AE+ +EMI +G P+ + F +
Sbjct: 444 LTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTL 489
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 100/227 (44%), Gaps = 8/227 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G KP+ +Y L+ Y + + K + +++ M I PD + +IG G+
Sbjct: 334 MVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGK 393
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A + +M+ G PD Y + C+ ++ DA ++ +GL+P+A +
Sbjct: 394 VDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDA----V 449
Query: 121 FFRVFYWSNDLRSSWN----LYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDM 176
FR R W+ L M+G G PN L+ ++ V A +++ M
Sbjct: 450 VFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLM 509
Query: 177 VEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
V ++ + L D C GK+ EA K M+ G KP++V++
Sbjct: 510 VRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTY 556
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 95/210 (45%), Gaps = 2/210 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV+PD+ +YN L+ CK+ + +A KI + M P+ +Y +++ G G K
Sbjct: 303 GVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKM 362
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+L M G PD +N I Y ++ DA L +M +GL+P+ TY +
Sbjct: 363 HHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDA 422
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGS 183
+ + + R++ G P+ L+ LC R +K + A +L +M+ +G
Sbjct: 423 LCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCAR-DKWDKAEELAVEMIGRGICP 481
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIE 213
+ + L + LC G + A+ F M+
Sbjct: 482 NNIFFNTLLNHLCKEGMVARAKNIFDLMVR 511
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 95/217 (43%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G+ PD V+Y ++D C +V+ A ++ E ++PD + + ++I GL +
Sbjct: 404 MRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDK 463
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA ++ EM G P+ +N + + C + A + D MV + + TYN
Sbjct: 464 WDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNT 523
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + L M+ G PN + ++ + ++E A L+ M KG
Sbjct: 524 LIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKG 583
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHK 217
I+ + L + A++ +L MI+ G K
Sbjct: 584 VNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIK 620
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 107/260 (41%), Gaps = 42/260 (16%)
Query: 6 VKPDIVSYNCLID-----------------------------------VYCKDRQVEKAY 30
V P++++Y+ +ID C ++ +A
Sbjct: 87 VPPNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAM 146
Query: 31 KI-VEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEM-----KEYGCYPDAAAYN 84
I + +M +P+V SYT ++ GL + +A +L M G PD +YN
Sbjct: 147 DIALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYN 206
Query: 85 AAIRNYCI-AKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMG 143
I ++L A L D+M+++GLSP+ TYN + + + + RM+
Sbjct: 207 TVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVK 266
Query: 144 TGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVE 203
G +PN + L+ K A+ ++ M G + + L LC G+ +E
Sbjct: 267 NGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSME 326
Query: 204 AEKSFLEMIEKGHKPSQVSF 223
A K F M+++GHKP+ ++
Sbjct: 327 ARKIFDSMVKRGHKPNSATY 346
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 72/142 (50%), Gaps = 4/142 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + V+ D+++YN LID YC +V++A K++E M + + P+ ++Y ++I G G+
Sbjct: 509 MVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGR 568
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A + ++M G P Y+ ++ A+R A L M++ G+ + TYN+
Sbjct: 569 IEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNI 628
Query: 121 FFRVFYWSN----DLRSSWNLY 138
+N LR NLY
Sbjct: 629 ILLGLCQNNCTDDALRIFQNLY 650
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 86/196 (43%), Gaps = 36/196 (18%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GVKP+ V+YN +I+ YCK+ ++E A+ + +M + ++P +++Y++I+ GL + A
Sbjct: 548 GVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAA 607
Query: 65 RDVLKEMKEYGCYPDAAAYNAAI----RNYCIAKRLR----------------------- 97
+++ M + G D YN + +N C LR
Sbjct: 608 KELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDA 667
Query: 98 --------DASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPN 149
+A L ++ +GL PN TY L + L +L+ + GC N
Sbjct: 668 LLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTAN 727
Query: 150 TQSCMFLV-KLCKRQE 164
++ LV KL ++ E
Sbjct: 728 SRMLNALVGKLLQKGE 743
>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 110/226 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ P++V+YN +I CK + ++KA +++ M + P+ +Y SI+ G GQ
Sbjct: 225 MLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQ 284
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
P +A LK+M G PD YN+ + C R +A + D M ++GL P TTY
Sbjct: 285 PKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGT 344
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + L L M+ G PN L+ +Q KV+ A+ +++ M ++G
Sbjct: 345 LLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQG 404
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + +LC G++ +A + F +MI++ P + + +
Sbjct: 405 LNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSL 450
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 110/217 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G+ PD V+Y +I + CK +VE A + E+M DE +SP I Y S+I L + +
Sbjct: 400 MRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDK 459
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA++++ EM + G D +N+ I ++C R+ ++ L D MV G+ PN TY+
Sbjct: 460 WDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYST 519
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + + L M+ G P+ + L+ + ++E AL L+ +M G
Sbjct: 520 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSG 579
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHK 217
I+ +++ L + A++ ++ + E G +
Sbjct: 580 VSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQ 616
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 105/226 (46%), Gaps = 4/226 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDE--DISPDVISYTSIIGGLGLV 58
M ++G P++ SYN L+ C + + ++A ++++ M D+ D PDV+SYT++I G
Sbjct: 153 MTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKE 212
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
G DKA EM + G P+ YN+ I C A+ + A ++ MV+ G+ PN TY
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMV 177
N + S + + +M G P+ + L+ LCK E A ++++ M
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTE-ARKMFDSMT 331
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++G I L G LVE M+ G P+ F
Sbjct: 332 KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVF 377
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 111/226 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV P+ +YN ++ YC Q ++A ++KM + + PDV++Y S++ L G+
Sbjct: 260 MVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGR 319
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR + M + G P+ Y ++ Y L + GL+D MV G+ PN +++
Sbjct: 320 CTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSI 379
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + ++ +M G P+T + ++ + + +VE A++ + M+++
Sbjct: 380 LICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDER 439
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+V + L LC K +A++ LEM+++G + F I
Sbjct: 440 LSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSI 485
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 103/226 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ P+ ++ LI Y K +V++A + KMR + ++PD ++Y ++IG L G+
Sbjct: 365 MVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGR 424
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A ++M + P YN+ I + CI + A L+ EM+++G+ + +N
Sbjct: 425 VEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNS 484
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ S L+ M+ G PN + L+ K++ A +L MV G
Sbjct: 485 IIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVG 544
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + L + C + ++ +A F EM G P +++ I
Sbjct: 545 MKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNII 590
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 108/257 (42%), Gaps = 40/257 (15%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
V P++ +Y LI C +++ + + + + D I++T ++ GL + A
Sbjct: 87 VTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAM 146
Query: 66 D-VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKG--LSPNATTYNLFF 122
D VL+ M + GC P+ +YN ++ C R ++A L+ M + G P+ +Y
Sbjct: 147 DIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVI 206
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKG- 180
F+ DL ++ Y M+ G LPN + + LCK Q ++ A+++ MV+ G
Sbjct: 207 NGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQ-AMDKAMEVLTSMVKNGV 265
Query: 181 ------FGSY----------------------------ILVSDVLFDLLCDMGKLVEAEK 206
+ S ++ + L D LC G+ EA K
Sbjct: 266 MPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARK 325
Query: 207 SFLEMIEKGHKPSQVSF 223
F M ++G KP ++
Sbjct: 326 MFDSMTKRGLKPEITTY 342
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 73/151 (48%), Gaps = 4/151 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +GVKP+I++Y+ LID YC ++++A K++ M + PD ++Y ++I G + +
Sbjct: 505 MVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISR 564
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A + +EM+ G PD YN ++ +R A L + E G +TYN+
Sbjct: 565 MEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNI 624
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQ 151
+N + RM CL + Q
Sbjct: 625 ILHGLCKNNLTDEAL----RMFQNLCLTDLQ 651
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 59/131 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+ E G + ++ +YN ++ CK+ ++A ++ + + D+ + ++ +IG L VG+
Sbjct: 610 ITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGR 669
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A+D+ + G PD Y+ N L + L M E G + N+ N
Sbjct: 670 NDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNS 729
Query: 121 FFRVFYWSNDL 131
R D+
Sbjct: 730 IVRKLLQRGDI 740
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 89/219 (40%), Gaps = 12/219 (5%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV PDI++YN ++ + R+ A ++ + + ++ +Y I+ GL
Sbjct: 575 MESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNL 634
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + + + + +N I R +A L + GL P+ TY+L
Sbjct: 635 TDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSL 694
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMV-E 178
L +L+ M GC N++ +V KL +R + L+ M+ E
Sbjct: 695 MAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLF--MIDE 752
Query: 179 KGFGSYILVSDVLFDLLCDMGK-------LVEAEKSFLE 210
K F + + DLL GK L E KSF+E
Sbjct: 753 KHFSLEASTASLFLDLLSG-GKYQEYHRFLPEKYKSFIE 790
>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
Length = 797
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 112/226 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G++P++V+Y +ID CK + V++A + ++M D+ + PD +Y +I G +G+
Sbjct: 229 MMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGK 288
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ +L+EM +G PD Y + + C R R+A L D M+ KG+ PN Y +
Sbjct: 289 WKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGI 348
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L +L M+ G P+ + ++ ++ A+ ++N M ++G
Sbjct: 349 LIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQG 408
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ L D LC +G++ +A F +M+ +G P+ F +
Sbjct: 409 LSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSL 454
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 104/223 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G++PD+V +N ++ C QV KA ++++ M P VISYT++IGG LVG+
Sbjct: 474 MLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGR 533
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A L M G PD YN + YC A R+ DA G+ EM+ G++P TY+
Sbjct: 534 IDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYST 593
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + LY M+ +G N ++ + V+ A +L+ + K
Sbjct: 594 ILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKD 653
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
F I +++ L G+ +A F + G P ++
Sbjct: 654 FQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTY 696
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 114/256 (44%), Gaps = 5/256 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRD---EDISPDVISYTSIIGGLGL 57
M E+G PD+VSYN L+ +C +++ E+A +++ M D P+V+SY +I G
Sbjct: 156 MPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVINGFFT 215
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
GQ DKA ++ EM + G P+ Y I C A+ + A G+ +M++KG+ P+ T
Sbjct: 216 EGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDT 275
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
YN + + + M G P+ + L+ + A L++ M+
Sbjct: 276 YNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMI 335
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI-KALMELANKQ 236
KG + + +L G L E M+E G P F I A + A
Sbjct: 336 RKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMID 395
Query: 237 EALQNLSNKMALFGPS 252
EA+ + NKM G S
Sbjct: 396 EAMH-IFNKMKQQGLS 410
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 118/240 (49%), Gaps = 2/240 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GVKPD +YNCLI Y + ++ +++E+M + PD +Y S++ L G+
Sbjct: 264 MIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGR 323
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR + M G P+ A Y I Y L + L++ MVE GLSP+ +N+
Sbjct: 324 CREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNI 383
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + + + +++ +M G P+ + L+ + +V+ A+ +N M+ +G
Sbjct: 384 IFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEG 443
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
I V + L LC + K +A++ + EM+ +G +P V F I L L K + ++
Sbjct: 444 VAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTI--LCNLCTKGQVMK 501
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 99/217 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G+ PD+V+Y LID CK +V+ A +M +E ++P++ + S++ GL V +
Sbjct: 404 MKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDK 463
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA++ EM G PD +N + N C ++ A L+D M G P +Y
Sbjct: 464 WEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTT 523
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + M+ G P+ + L+ R +++ A ++ +M+ G
Sbjct: 524 LIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNG 583
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHK 217
++ + L + EA++ +L MI G +
Sbjct: 584 ITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQ 620
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 98/218 (44%), Gaps = 6/218 (2%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
V PD +Y+ LI +C+ ++E + + + I ++ GL + +A
Sbjct: 90 VTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAM 149
Query: 66 DVL-KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVE---KGLSPNATTYNLF 121
D+L K M E GC PD +YN ++ +C KR +A L+ M + + PN +Y +
Sbjct: 150 DILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIV 209
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKG 180
F+ + ++NL+ MM G PN + ++ LCK Q V+ A ++ M++KG
Sbjct: 210 INGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQ-VVDRAEGVFQQMIDKG 268
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
+ L +GK E + EM G KP
Sbjct: 269 VKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKP 306
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 68/168 (40%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G + +I YN +++ K+ V++A+K+ + + +D ++ ++ +IG L G+ + A
Sbjct: 618 GKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDA 677
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ + YG PD Y N L + L M + G +PN+ N R
Sbjct: 678 MHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRR 737
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQL 172
D+ + C++ + L+ L R E A L
Sbjct: 738 LLHRGDITRAGAYLCKLDEKNFSLEASTTAMLISLLSRDEYHHHATSL 785
>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
Length = 737
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 120/244 (49%), Gaps = 3/244 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G PDI +YN +I C+ +++ A +++E+M + PDV++Y SI+ GL Q
Sbjct: 402 MTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQ 461
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A +V + ++ G + D + I C ++RL DA L+ EM G +P+ Y +
Sbjct: 462 VDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTI 521
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEK 179
F ++ L S + M+ GC+P + ++ KLCK +V L M+E+
Sbjct: 522 LIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCK-SARVRDGCMLLKTMLER 580
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEA 238
G +V + D LC EA + + M + G P+ V++ + L +++ EA
Sbjct: 581 GVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEA 640
Query: 239 LQNL 242
+ L
Sbjct: 641 IHLL 644
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 108/219 (49%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P +++Y L+D CK ++ A I+E M + +P+V++Y ++I G +G D+A +
Sbjct: 234 PSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVL 293
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
+M E C PD YN I YC +R +D + L+ EMV+ G PN TYN
Sbjct: 294 FNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVK 353
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
S ++NL M+ C P+ + ++ + + ++++A +L+ M ++G I
Sbjct: 354 SGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYT 413
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+++ C ++ +A + M E G P V++ I
Sbjct: 414 YNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSI 452
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 110/227 (48%), Gaps = 2/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G PD+V+YN ++ CK QV++AY++ E +R+ DV++ +++I GL +
Sbjct: 437 MTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRR 496
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A +L+EM+ G PD AY I +C A +L + EM++KG P TY++
Sbjct: 497 LDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSI 556
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
S +R L M+ G P+ ++ LCK E A +L+ M +
Sbjct: 557 VIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDE-AYELYKLMKQT 615
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G ++ +VL D LC + +L EA M G P V++ +
Sbjct: 616 GCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSV 662
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 109/216 (50%), Gaps = 1/216 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD ++Y+ LI+ +CK R ++AY+++++M I P Y +II GL G+ D A
Sbjct: 165 PDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVH 224
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
++M+ C P Y + C + R+ DAS ++++M+E G +PN TYN F
Sbjct: 225 YRDMQR-NCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCK 283
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
++ + L+ +M+ C P+ + L+ +QE+ + +L +MV+ G +
Sbjct: 284 LGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFIT 343
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ L D L GK ++A M+ + KPS +F
Sbjct: 344 YNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTF 379
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 92/180 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G P +++Y+ +ID CK +V +++ M + ++PD I YTS+I GL
Sbjct: 542 MLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDS 601
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A ++ K MK+ GC P YN + C RL +A L++ M G P+ TYN
Sbjct: 602 YDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNS 661
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F F+ S + ++ L+ M GC P L+ +EK++ A+++W + +E G
Sbjct: 662 VFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAMEIWEEALEAG 721
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 107/220 (48%), Gaps = 2/220 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+R G D+V+ + LID CK R+++ A K++ +M +PDV++YT +I G Q
Sbjct: 472 LRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQ 531
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DK+ EM + GC P Y+ I C + R+RD L+ M+E+G++P+A Y
Sbjct: 532 LDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTS 591
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEK 179
S+ ++ LY M TGC P + LV KLCK +++ A+ L M
Sbjct: 592 VIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCK-VSRLDEAIHLLEVMESD 650
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
G + + +FD + +A + F M +G P+
Sbjct: 651 GCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPT 690
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 106/215 (49%), Gaps = 1/215 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G P++V+YN LI+ +CK +++A + +M + SPDV +Y +I G +
Sbjct: 262 MIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQER 321
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
P +L+EM +YGC P+ YN + + + + DA L M+ + P+ T+NL
Sbjct: 322 PQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNL 381
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+F L ++ L+ M GCLP+ + ++ R +++ A QL M E G
Sbjct: 382 MIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAG 441
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
++ + + LC ++ EA + + E++ G
Sbjct: 442 CPPDVVTYNSIVSGLCKASQVDEAYEVY-EVLRNG 475
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 108/224 (48%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G +P+ ++YN L+D K + A+ + + M D P ++ +I VGQ
Sbjct: 332 MVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQ 391
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A ++ + M + GC PD YN I C A R+ DA L++ M E G P+ TYN
Sbjct: 392 LDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNS 451
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
++ + ++ +Y + G + +C L+ LCK + +++ A +L +M
Sbjct: 452 IVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSR-RLDDAEKLLREMERN 510
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G ++ +L C +L ++ F EM++KG P+ +++
Sbjct: 511 GSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITY 554
>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 117/224 (52%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E + P++V++N LID + K+ ++ +A K+ ++M I P++++Y S+I G + +
Sbjct: 317 MIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDR 376
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A+ + M C PD YN I+ +C AKR+ + L EM ++GL N TYN
Sbjct: 377 LDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNT 436
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ + + D + ++ +M+ G P+ + + L LCK K+E AL ++ + +
Sbjct: 437 LIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYG-KLEKALVVFEYLQKS 495
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I +++ + +C GK+ + F + KG KP+ + +
Sbjct: 496 KMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIY 539
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 112/223 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + ++ ++V YN +ID CK + ++ A+ + KM + I PDV +Y S+I L G+
Sbjct: 247 MEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGR 306
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +L +M E P+ +N+ I + +L +A L DEM+++ + PN TYN
Sbjct: 307 WSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNS 366
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + L + ++ M+ CLP+ + L+K + ++VE ++L+ +M ++G
Sbjct: 367 LINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRG 426
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + L L G A+K F +M+ G P +++
Sbjct: 427 LVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITY 469
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 111/226 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++G +PDIV+ + L++ YC +++ +A +V++M + PD +++ ++I GL L +
Sbjct: 142 MMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNK 201
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++ M GC PD Y + C + A L+ +M + + N YN
Sbjct: 202 ASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNT 261
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ +++L+ +M G P+ + L+ + A +L +DM+E+
Sbjct: 262 IIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERK 321
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ + L D GKL+EAEK F EMI++ P+ V++ +
Sbjct: 322 INPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSL 367
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 114/247 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G +PD+ +Y +++ CK ++ A +++KM I +V+ Y +II GL
Sbjct: 212 MVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKH 271
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A D+ +M+ G PD YN+ I C R DAS L+ +M+E+ ++PN T+N
Sbjct: 272 MDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNS 331
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F L + L+ M+ PN + L+ ++++ A Q++ MV K
Sbjct: 332 LIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKD 391
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
++ + L C ++ E + F EM ++G + V++ + + A + Q
Sbjct: 392 CLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQ 451
Query: 241 NLSNKMA 247
+ KM
Sbjct: 452 KIFKKMV 458
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 105/220 (47%), Gaps = 2/220 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P I+ ++ L+ K + + + E+M++ I + +Y+ ++ Q A V
Sbjct: 79 PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILLNCFCRRSQLPLALAV 138
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L +M + G PD ++ + YC KR+ +A L+D+MVE G P+ T+N +
Sbjct: 139 LGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFL 198
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYIL 186
N + L RM+ GC P+ + +V LCKR + +++AL L M + + ++
Sbjct: 199 HNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGD-IDLALSLLKKMEKGKIEANVV 257
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + + D LC + +A F +M KG KP ++ +
Sbjct: 258 IYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSL 297
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 106/227 (46%), Gaps = 2/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ +G+ + +Y+ L++ +C+ Q+ A ++ KM PD+++ +S++ G +
Sbjct: 107 MQNLGIPHNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKR 166
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++ +M E G PD +N I + + +A L+D MV +G P+ TY
Sbjct: 167 ISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGT 226
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
D+ + +L +M N ++ LCK + ++ A L+N M K
Sbjct: 227 VVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKH-MDDAFDLFNKMETK 285
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G + + L LC+ G+ +A + +MIE+ P+ V+F +
Sbjct: 286 GIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSL 332
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 85/174 (48%), Gaps = 2/174 (1%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD+V+YN LI +CK ++VE+ ++ +M + + ++Y ++I GL G D A+ +
Sbjct: 394 PDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKI 453
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
K+M G PD Y+ + C +L A + + + + + PN TYN+
Sbjct: 454 FKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCK 513
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKG 180
+ + W+L+C + G PN ++ C++ K E A L+ +M E G
Sbjct: 514 AGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEE-ADALFREMKEDG 566
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 98/212 (46%), Gaps = 4/212 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ + V+YN LI + + A KI +KM + + PD+I+Y+ ++ GL G+
Sbjct: 422 MSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGK 481
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA V + +++ P+ YN I C A ++ D L + KG+ PN Y
Sbjct: 482 LEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTT 541
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + L+ M G LP++ L++ R + +L +M G
Sbjct: 542 MISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCG 601
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMI 212
F ++ ++L D G+L EKS+LEM+
Sbjct: 602 FVGDASTISMVINMLHD-GRL---EKSYLEML 629
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 68/163 (41%)
Query: 88 RNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCL 147
RN +L DA L EMV+ P+ ++ N +L +M G
Sbjct: 54 RNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIP 113
Query: 148 PNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKS 207
N + L+ R+ ++ +AL + M++ G+ I+ L + C ++ EA
Sbjct: 114 HNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVAL 173
Query: 208 FLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFG 250
+M+E G+KP V+F + + L NK L ++M G
Sbjct: 174 VDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARG 216
>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 677
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 113/223 (50%), Gaps = 2/223 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV PD++S++ LI V ++ +++A M+ + PD + YT +I G G
Sbjct: 316 MLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGM 375
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++ +M E GC D AYN + C K L DA+ L DEMVE+G+ P+ T+
Sbjct: 376 MSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTT 435
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
++ + +L+ M P+ + L+ CK E +E A +LWN+M+ +
Sbjct: 436 LIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTE-MEKANELWNEMISR 494
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
+ +L + C++G + EA + + EMI KG KP+ V+
Sbjct: 495 KIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVT 537
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 117/241 (48%), Gaps = 1/241 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E GV PD ++ LI +CK+ + KA + M ++I PD+++Y +I G +
Sbjct: 421 MVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTE 480
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA ++ EM +P+ +Y + YC + +A L DEM+ KG+ P T N
Sbjct: 481 MEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNT 540
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + S DL + +M+ G P++ + L+ + E ++ A L N M KG
Sbjct: 541 VIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKG 600
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
++ +V+ + C G++ EAE +MIE+G P + ++ I + N +EA
Sbjct: 601 LQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLINGYVSQDNLKEAF 660
Query: 240 Q 240
+
Sbjct: 661 R 661
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 120/250 (48%), Gaps = 6/250 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ DIV+YN LI+ YC++ + +A++++ M + + P + +Y ++I GL G+
Sbjct: 211 MEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGR 270
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A+ V EM G PD YN + C +A + +M+ +G+SP+ +++
Sbjct: 271 YVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSS 330
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
V + L + + M +G +P+ L+ R + AL++ + M+E+G
Sbjct: 331 LIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQG 390
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
++ + + + LC L +A F EM+E+G P +F L +
Sbjct: 391 CALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTF------TTLIHGHCKEG 444
Query: 241 NLSNKMALFG 250
N+ ++LFG
Sbjct: 445 NMGKALSLFG 454
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 103/218 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + +KPDIV+YN LID +CK ++EKA ++ +M I P+ ISY ++ G +G
Sbjct: 456 MTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGF 515
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + EM G P N I+ YC + L A + +M+ +G+ P++ TYN
Sbjct: 516 VSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNT 575
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + ++ L +M G P+ + ++ RQ +++ A + M+E+G
Sbjct: 576 LINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERG 635
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
L + L EA + EM+++G P
Sbjct: 636 IDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFVP 673
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 105/222 (47%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G++ ++ + N +++ CKD +++ + M + I D+++Y ++I G +A
Sbjct: 180 GIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEA 239
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+V+ M G P YNA I C R A G+ +EM+ GLSP+ TTYN
Sbjct: 240 FEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVE 299
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+N+ + +++ M+ G P+ S L+ + R ++ AL + DM G
Sbjct: 300 SCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPD 359
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ +L + C G + EA + +M+E+G V++ I
Sbjct: 360 NVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTI 401
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 81/149 (54%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+KP +V+ N +I YC+ + KA + + KM E + PD I+Y ++I G
Sbjct: 526 MIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEY 585
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA ++ +M+ G PD YN + +C R+++A ++ +M+E+G+ P+ +TY
Sbjct: 586 MDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTT 645
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPN 149
+ ++L+ ++ + M+ G +P+
Sbjct: 646 LINGYVSQDNLKEAFRFHDEMLQRGFVPD 674
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 93/216 (43%), Gaps = 2/216 (0%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
D + ++ LI Y + R++ + + +R + + + S++GGL +G D A +V
Sbjct: 114 DNLVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVY 173
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
E+ G + N + C ++ D + +M +KG+ + TYN +
Sbjct: 174 NEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCRE 233
Query: 129 NDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYILV 187
L ++ + M G G P + ++ LCK+ V A ++N+M+ G
Sbjct: 234 GLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVR-AKGVFNEMLSIGLSPDTTT 292
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ L C +EA+ F +M+ +G P +SF
Sbjct: 293 YNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISF 328
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 95/224 (42%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+R G I + N L+ K V+ A+++ ++ I +V + ++ L +
Sbjct: 141 LRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNEIARSGIELNVYTLNIMVNALCKDHK 200
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D + L +M++ G + D YN I YC L +A +M+ M KGL P TYN
Sbjct: 201 IDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNA 260
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ ++ M+ G P+T + LV+ C+ +E A +++DM+ +
Sbjct: 261 VINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLE-AKDIFSDMLHR 319
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G ++ L + G L +A F +M G P V +
Sbjct: 320 GVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIY 363
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 61/151 (40%)
Query: 76 CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSW 135
C D ++ IR+Y A++L + + + KG + N + +W
Sbjct: 111 CGVDNLVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAW 170
Query: 136 NLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLL 195
+Y + +G N + +V + K++ DM +KG + I+ + L +
Sbjct: 171 EVYNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAY 230
Query: 196 CDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
C G L EA + M KG KP+ ++ +
Sbjct: 231 CREGLLGEAFEVMNSMSGKGLKPTLFTYNAV 261
>gi|356541430|ref|XP_003539180.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Glycine max]
Length = 492
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 128/247 (51%), Gaps = 6/247 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G++P +V+YN ++ Y + Q+++A++ +M+ DV+SYT++I G G G+
Sbjct: 231 MVQRGIEPTMVTYNTMLKGYFRSNQIKEAWEFYLEMKKRKCEIDVVSYTTVIHGFGEAGE 290
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGL-SPNATTYN 119
KA+ V EM + G P+ A YNA I+ +C +++A + +EMV +G+ SPN T+N
Sbjct: 291 VKKAKRVFDEMVKEGVAPNVATYNALIQVFCKKDSVQNAVAVFEEMVREGVCSPNVVTFN 350
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE- 178
+ R D+ + RM G + Q+ +++ ++E L+++ M +
Sbjct: 351 VVIRGLCHVGDMERALGFMERMGEHGLRASVQTYNVVIRYFCDAGEIEKGLEVFGKMGDG 410
Query: 179 ---KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANK 235
+Y ++ +F + LV A K +EM+E+G P + +F R+ + +
Sbjct: 411 LCLPNLDTYNVLISAMF-VRKKSEDLVVAGKLLMEMVERGFLPRKFTFNRVLNGLVITGN 469
Query: 236 QEALQNL 242
Q+ +++
Sbjct: 470 QDFAKDI 476
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 110/264 (41%), Gaps = 36/264 (13%)
Query: 12 SYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEM 71
S++ +D+ + R A+ +V +MR + P + + +G+P +A M
Sbjct: 103 SFDHAVDIAARMRDFNSAWALVGRMRSLRLGPSPKTLAILAERYASIGKPHRAVRTFLSM 162
Query: 72 KEYGCY----------------------------------PDAAAYNAAIRNYCIAKRLR 97
E+G + PD +YN YC+ KR
Sbjct: 163 HEHGLHQDLHSFNTLLDILCKSNRVETAHDLLRTLKSRFRPDTVSYNILANGYCLKKRTP 222
Query: 98 DASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV 157
A ++ EMV++G+ P TYN + ++ SN ++ +W Y M C + S ++
Sbjct: 223 MALRVLKEMVQRGIEPTMVTYNTMLKGYFRSNQIKEAWEFYLEMKKRKCEIDVVSYTTVI 282
Query: 158 KLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGH- 216
+V+ A +++++MV++G + + L + C + A F EM+ +G
Sbjct: 283 HGFGEAGEVKKAKRVFDEMVKEGVAPNVATYNALIQVFCKKDSVQNAVAVFEEMVREGVC 342
Query: 217 KPSQVSFR-RIKALMELANKQEAL 239
P+ V+F I+ L + + + AL
Sbjct: 343 SPNVVTFNVVIRGLCHVGDMERAL 366
>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
Length = 485
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 114/223 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ GV+ +VS+N +I C+ ++ A + +M + ++PDV +Y ++I GL VG+
Sbjct: 142 MQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGR 201
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ AR V ++M G P+A + I +C L EM E+G+ P+A TYN
Sbjct: 202 IEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNA 261
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ DL+S+ + M G P+T + L+ ++E++++A+++ +MV +G
Sbjct: 262 IVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEG 321
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G + L L G+ +AE+ EM+E G +P ++
Sbjct: 322 VGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTY 364
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 101/206 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MRE GV+PD V+YN +++ C+ R ++ A IV +MR + PD ++YT++I G +
Sbjct: 247 MRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEE 306
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A ++ + M G D Y A I A R DA ++ EM+E GL P+ TTY +
Sbjct: 307 LDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTM 366
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F D+++ L M G P + ++ + +++ A L N M+ G
Sbjct: 367 VIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIG 426
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEK 206
+ ++L D C GK+ + E+
Sbjct: 427 VSPDDITYNILLDGHCKHGKVTDIEE 452
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 103/226 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E GV PD+ +Y LI C+ ++E A + EKM + P+ + +T +I G
Sbjct: 177 MSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGD 236
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ ++ +EM+E G PDA YNA + C A+ L+ ASG++ EM GL P+ TY
Sbjct: 237 AETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTT 296
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ +L + + M+ G + + L+ + + A ++ +M+E G
Sbjct: 297 LIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAG 356
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ D C G + + EM KG KP V++ I
Sbjct: 357 LEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVI 402
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 80/189 (42%)
Query: 35 KMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAK 94
++ D + P+ + ++ L +G+ A++V EM+ G ++N I C A
Sbjct: 106 QLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAG 165
Query: 95 RLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCM 154
L A L M E G++P+ TY + + + ++ +M G G PN
Sbjct: 166 DLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFT 225
Query: 155 FLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEK 214
L+ ++ E L+L +M E+G + + + + LC L A +EM
Sbjct: 226 ILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSA 285
Query: 215 GHKPSQVSF 223
G +P V++
Sbjct: 286 GLRPDTVTY 294
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 58/119 (48%), Gaps = 3/119 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G++PD +Y +ID +C+ V+ +++++M+++ P V++Y I+ G +GQ
Sbjct: 352 MMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQ 411
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
A +L M G PD YN + +C ++ D L KG P+ Y
Sbjct: 412 MKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKVTDIEELKS---AKGTVPDLGVYT 467
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 68/157 (43%)
Query: 70 EMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSN 129
++ + G P+A +N +R+ L A + DEM +G+ ++N +
Sbjct: 106 QLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAG 165
Query: 130 DLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSD 189
DL + L+ RM G P+ + L++ R ++E A ++ M +G +V
Sbjct: 166 DLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFT 225
Query: 190 VLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+L D C G + EM E+G +P V++ I
Sbjct: 226 ILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAI 262
>gi|242056139|ref|XP_002457215.1| hypothetical protein SORBIDRAFT_03g003430 [Sorghum bicolor]
gi|241929190|gb|EES02335.1| hypothetical protein SORBIDRAFT_03g003430 [Sorghum bicolor]
Length = 573
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 114/226 (50%), Gaps = 1/226 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ P++V++N LI+ YCK+ + A K+ E+MR I ++++YTS++ GL G+
Sbjct: 252 MNQAGISPNVVTFNVLINGYCKESNITAAIKVFEEMRQHGIPANMVTYTSLVSGLCREGK 311
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ + +++EM+E G N+ + +C + +A G +D M +KG+ PN TYN
Sbjct: 312 VEDSMKLVEEMEELG-LATLPTLNSVLNGFCKKGMMVEAEGWVDGMAQKGMKPNVVTYNT 370
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ + M G G P+ ++ L+ L ++M E G
Sbjct: 371 LIDGYQRLGKMKEATAAKGAMAGKGISPDVKTYNCLITGFTTSTDWRSVSGLLDEMKETG 430
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ ++ +VL LC G++ +A K EM+E G +P ++ I
Sbjct: 431 VKADLVTYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHRTYNAI 476
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 102/218 (46%), Gaps = 16/218 (7%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+KP++V+YN LID Y + ++++A M + ISPDV +Y +I G
Sbjct: 356 MAQKGMKPNVVTYNTLIDGYQRLGKMKEATAAKGAMAGKGISPDVKTYNCLITGFTTSTD 415
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+L EMKE G D YN I C +R A L+DEMVE GL P TYN
Sbjct: 416 WRSVSGLLDEMKETGVKADLVTYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHRTYNA 475
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F D + + ++ RM N +C +K + K++ A + N+M+EKG
Sbjct: 476 IINGFCEKGDAKGAHDIRIRMEKCKKRANVVTCNVFLKYFCKMGKMDEANVVLNEMLEKG 535
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
LV + + + + G MIEKG+ P
Sbjct: 536 -----LVPNRITYEIINSG-----------MIEKGYVP 557
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 120/258 (46%), Gaps = 8/258 (3%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
+P S N L+ + +V+ A + +SPD ++ +I GL GQ KA D
Sbjct: 150 RPSAFSVNALLAALVRADRVDLAERAFRAALRRRVSPDKFTFNIVISGLCKTGQLRKAGD 209
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNY---CIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
V K+M+ +G P YN I Y A ++ L+ EM + G+SPN T+N+
Sbjct: 210 VAKDMRGWGLMPSVVTYNTLIDGYYKWGRAGKMYHVDMLLKEMNQAGISPNVVTFNVLIN 269
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
+ +++ ++ ++ M G N + LV R+ KVE +++L +M E G +
Sbjct: 270 GYCKESNITAAIKVFEEMRQHGIPANMVTYTSLVSGLCREGKVEDSMKLVEEMEELGLAT 329
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNL 242
++ VL + C G +VEAE M +KG KP+ V++ I L +EA
Sbjct: 330 LPTLNSVL-NGFCKKGMMVEAEGWVDGMAQKGMKPNVVTYNTLIDGYQRLGKMKEA---T 385
Query: 243 SNKMALFGPSMIPKREEY 260
+ K A+ G + P + Y
Sbjct: 386 AAKGAMAGKGISPDVKTY 403
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 114/264 (43%), Gaps = 34/264 (12%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRD---------------------- 38
MR+ G+ ++V+Y L+ C++ +VE + K+VE+M +
Sbjct: 287 MRQHGIPANMVTYTSLVSGLCREGKVEDSMKLVEEMEELGLATLPTLNSVLNGFCKKGMM 346
Query: 39 ------------EDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAA 86
+ + P+V++Y ++I G +G+ +A M G PD YN
Sbjct: 347 VEAEGWVDGMAQKGMKPNVVTYNTLIDGYQRLGKMKEATAAKGAMAGKGISPDVKTYNCL 406
Query: 87 IRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGC 146
I + + R SGL+DEM E G+ + TYN+ ++R + L M+ G
Sbjct: 407 ITGFTTSTDWRSVSGLLDEMKETGVKADLVTYNVLIGALCCKGEVRKAVKLLDEMVEVGL 466
Query: 147 LPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEK 206
P ++ ++ + + A + M + + ++ +V C MGK+ EA
Sbjct: 467 EPKHRTYNAIINGFCEKGDAKGAHDIRIRMEKCKKRANVVTCNVFLKYFCKMGKMDEANV 526
Query: 207 SFLEMIEKGHKPSQVSFRRIKALM 230
EM+EKG P+++++ I + M
Sbjct: 527 VLNEMLEKGLVPNRITYEIINSGM 550
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 95/219 (43%), Gaps = 10/219 (4%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
V PD ++N +I CK Q+ KA + + MR + P V++Y ++I G G+ K
Sbjct: 184 VSPDKFTFNIVISGLCKTGQLRKAGDVAKDMRGWGLMPSVVTYNTLIDGYYKWGRAGKMY 243
Query: 66 DV---LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
V LKEM + G P+ +N I YC + A + +EM + G+ N TY
Sbjct: 244 HVDMLLKEMNQAGISPNVVTFNVLINGYCKESNITAAIKVFEEMRQHGIPANMVTYTSLV 303
Query: 123 RVFYWSNDLRSSWNLYCRM--MGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWND-MVEK 179
+ S L M +G LP S L CK+ VE + W D M +K
Sbjct: 304 SGLCREGKVEDSMKLVEEMEELGLATLPTLNS--VLNGFCKKGMMVEA--EGWVDGMAQK 359
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
G ++ + L D +GK+ EA + M KG P
Sbjct: 360 GMKPNVVTYNTLIDGYQRLGKMKEATAAKGAMAGKGISP 398
>gi|449442128|ref|XP_004138834.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Cucumis sativus]
Length = 591
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 127/242 (52%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G++PD++SY I+ +C+++ K++ +M + P+VI++T I+ LG Q ++A
Sbjct: 341 GLEPDVISYTAFIEAHCREKDFRNVDKVLVQMEHKGCKPNVITFTIIMHALGKAKQINEA 400
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
V ++MK+ GC PD++ Y++ I A RL D ++++M ++G++P+ TYN
Sbjct: 401 LKVYEKMKKEGCVPDSSFYSSLIFILGKAGRLTDVKEIVEDMEKQGVTPDVLTYNTLISC 460
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ ++ L +M C P+ ++ L+K+ R++++++ L + M +
Sbjct: 461 ACAHSQEETALTLLLKMEEVSCKPDLKTYHPLLKMFCRKKRMKVLKFLLDHMFKNDVSIE 520
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSN 244
+L LC+ GKL A F EM+ K P +F+ +K +E + E ++ + N
Sbjct: 521 AGTYAILVRGLCENGKLHLACSFFGEMLSKAMVPKDSTFKMLKEELERKSMLEEMKIIEN 580
Query: 245 KM 246
M
Sbjct: 581 LM 582
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 98/214 (45%), Gaps = 1/214 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ D + N L+D K+ VE A+ + +++ I ++ S+ +I G + D+A
Sbjct: 272 GISTDTTAMNVLMDALVKEASVEDAHNVFRELKC-SIPFNLASFNVLIHGYCKAKKLDEA 330
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++ E+++ G PD +Y A I +C K R+ ++ +M KG PN T+ +
Sbjct: 331 WKIMGEVEKSGLEPDVISYTAFIEAHCREKDFRNVDKVLVQMEHKGCKPNVITFTIIMHA 390
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + + +Y +M GC+P++ L+ + + ++ ++ DM ++G
Sbjct: 391 LGKAKQINEALKVYEKMKKEGCVPDSSFYSSLIFILGKAGRLTDVKEIVEDMEKQGVTPD 450
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
+L + L C + A L+M E KP
Sbjct: 451 VLTYNTLISCACAHSQEETALTLLLKMEEVSCKP 484
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/250 (20%), Positives = 107/250 (42%), Gaps = 36/250 (14%)
Query: 12 SYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEM 71
SYN ++D+ K + +++V++M S + + + +I L G+ +A + +
Sbjct: 209 SYNSMVDILGKAKNFRLMWELVDEMNHLAGSVSLETMSKVIRRLARAGRHQEAIHAFRNI 268
Query: 72 KEYGCYPDA----------------------------------AAYNAAIRNYCIAKRLR 97
++YG D A++N I YC AK+L
Sbjct: 269 EKYGISTDTTAMNVLMDALVKEASVEDAHNVFRELKCSIPFNLASFNVLIHGYCKAKKLD 328
Query: 98 DASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV 157
+A +M E+ + GL P+ +Y F D R+ + +M GC PN + ++
Sbjct: 329 EAWKIMGEVEKSGLEPDVISYTAFIEAHCREKDFRNVDKVLVQMEHKGCKPNVITFTIIM 388
Query: 158 KLCKRQEKVEIALQLWNDMVEKG-FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGH 216
+ +++ AL+++ M ++G S ++F +L G+L + ++ +M ++G
Sbjct: 389 HALGKAKQINEALKVYEKMKKEGCVPDSSFYSSLIF-ILGKAGRLTDVKEIVEDMEKQGV 447
Query: 217 KPSQVSFRRI 226
P +++ +
Sbjct: 448 TPDVLTYNTL 457
>gi|326499175|dbj|BAK06078.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 566
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 120/253 (47%), Gaps = 37/253 (14%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD+ S+N +I CK V+KA ++VE+M + SPD +++ ++ GL + K R+V
Sbjct: 232 PDVWSFNVVIKGVCKVGDVQKALELVERMDEFGCSPDTVTHNILVNGLCRAKEVSKGREV 291
Query: 68 LKEMKEYG-CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
L+ ++ G C P+ Y + I YC A R+ DA + ++MV G SPN TYN+ +
Sbjct: 292 LRRLQRDGVCMPNVVTYTSVISGYCKAGRMEDAMAVYNDMVAVGTSPNVVTYNVLINGYG 351
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE-------- 178
+ ++ S+ +Y +M+ CLP+ + L+ R +++ A+++W +M +
Sbjct: 352 KAGNMGSAVAVYQQMILRRCLPDVVTFSSLIDGYCRCGQLDDAMKIWTEMAQYHIQPNAH 411
Query: 179 ----------------------------KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLE 210
+ + + D+LC GK+ EA +E
Sbjct: 412 TFCIIIHTFCKQNRSGEALHFLKKMNMRTDIAPQAFIYNPVIDVLCKGGKVDEANMILIE 471
Query: 211 MIEKGHKPSQVSF 223
M EKG +P + ++
Sbjct: 472 MEEKGCRPDKYTY 484
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 97/215 (45%), Gaps = 1/215 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P++V+Y +I YCK ++E A + M SP+V++Y +I G G G A V
Sbjct: 303 PNVVTYTSVISGYCKAGRMEDAMAVYNDMVAVGTSPNVVTYNVLINGYGKAGNMGSAVAV 362
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
++M C PD +++ I YC +L DA + EM + + PNA T+ + F
Sbjct: 363 YQQMILRRCLPDVVTFSSLIDGYCRCGQLDDAMKIWTEMAQYHIQPNAHTFCIIIHTFCK 422
Query: 128 SNDLRSSWNLYCRM-MGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
N + + +M M T P ++ + + KV+ A + +M EKG
Sbjct: 423 QNRSGEALHFLKKMNMRTDIAPQAFIYNPVIDVLCKGGKVDEANMILIEMEEKGCRPDKY 482
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQV 221
+L C G++ EA F +M+E G P +
Sbjct: 483 TYTILIIGHCMKGRIAEAVTFFHKMVETGCSPDSI 517
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 1/207 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G P++V+YN LI+ Y K + A + ++M PDV++++S+I G GQ
Sbjct: 331 MVAVGTSPNVVTYNVLINGYGKAGNMGSAVAVYQQMILRRCLPDVVTFSSLIDGYCRCGQ 390
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEM-VEKGLSPNATTYN 119
D A + EM +Y P+A + I +C R +A + +M + ++P A YN
Sbjct: 391 LDDAMKIWTEMAQYHIQPNAHTFCIIIHTFCKQNRSGEALHFLKKMNMRTDIAPQAFIYN 450
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
V + + + M GC P+ + L+ + ++ A+ ++ MVE
Sbjct: 451 PVIDVLCKGGKVDEANMILIEMEEKGCRPDKYTYTILIIGHCMKGRIAEAVTFFHKMVET 510
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEK 206
G +V + L G E +
Sbjct: 511 GCSPDSIVVNSFISCLLKSGMPGEVDH 537
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 111/259 (42%), Gaps = 38/259 (14%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDED-ISPDVISYTSIIGGLGLVGQP 61
++ + P SY +I + C+ + A ++ ++M D+ P+ + + G G
Sbjct: 120 QLAMPPSAHSYRYVISLMCQSGRHTDALQLFDQMTDQSGYFPNARFLSFLSGSCAAAGLL 179
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGL-SPNATTYNL 120
D A +L + ++GC +A AYN + + R++DA L + ++ G+ SP+ ++N+
Sbjct: 180 DAAAALLSKASQFGCSIEAYAYNKLMDLFIGHGRVQDAVALFEGWIQGGVYSPDVWSFNV 239
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQE--------------- 164
+ D++ + L RM GC P+T + LV LC+ +E
Sbjct: 240 VIKGVCKVGDVQKALELVERMDEFGCSPDTVTHNILVNGLCRAKEVSKGREVLRRLQRDG 299
Query: 165 --------------------KVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEA 204
++E A+ ++NDMV G ++ +VL + G + A
Sbjct: 300 VCMPNVVTYTSVISGYCKAGRMEDAMAVYNDMVAVGTSPNVVTYNVLINGYGKAGNMGSA 359
Query: 205 EKSFLEMIEKGHKPSQVSF 223
+ +MI + P V+F
Sbjct: 360 VAVYQQMILRRCLPDVVTF 378
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 32/69 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G +PD +Y LI +C ++ +A KM + SPD I S I L G
Sbjct: 472 MEEKGCRPDKYTYTILIIGHCMKGRIAEAVTFFHKMVETGCSPDSIVVNSFISCLLKSGM 531
Query: 61 PDKARDVLK 69
P + +++
Sbjct: 532 PGEVDHIMR 540
>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Glycine max]
Length = 777
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 119/249 (47%), Gaps = 2/249 (0%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E GV P +SYN L++ YC++ V+KA E+M + + P+ I++ ++I G+ D
Sbjct: 353 ENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVD 412
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
A ++ M E G P YN+ I Y +DEM + G+ PN +Y
Sbjct: 413 HAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLI 472
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
L + + M+G G PN + L++ K++ A + +++M++ G
Sbjct: 473 NCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGID 532
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQN 241
+ ++ + L + L G++ +AE FL+M KG P +++ I + N Q+ L+
Sbjct: 533 ATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLE- 591
Query: 242 LSNKMALFG 250
L +KM + G
Sbjct: 592 LYDKMKILG 600
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 104/251 (41%), Gaps = 28/251 (11%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G P S N L+ R EK + + D PD ++Y + ++
Sbjct: 113 MRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVAYGKAVQAAVMLKD 172
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DK +++K M + G P AYN + C +R++DA L DEM+++ + PN TYN
Sbjct: 173 LDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTYNT 232
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + RM N + L+ +V+ A ++ +M G
Sbjct: 233 LIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSG 292
Query: 181 F------------------------GSYILVSD----VLFDLLCDMGKLVEAEKSFLEMI 212
F G I + + +L + LC +G++ +AE+ +++
Sbjct: 293 FLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAKLV 352
Query: 213 EKGHKPSQVSF 223
E G PS++S+
Sbjct: 353 ENGVTPSKISY 363
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 108/247 (43%), Gaps = 28/247 (11%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISP----------------- 43
M+E V+ ++V+YN L++ C +V+ A +++ +M P
Sbjct: 253 MKEQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFLPGGFLSFVFDDHSNGAGD 312
Query: 44 -----------DVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCI 92
D +Y ++ GL VG+ +KA +VL ++ E G P +YN + YC
Sbjct: 313 DGLFDGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQ 372
Query: 93 AKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS 152
++ A ++M E+GL PN T+N F + ++ + RM+ G P ++
Sbjct: 373 EGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVET 432
Query: 153 CMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMI 212
L+ ++ + ++M + G ++ L + LC KL++AE +MI
Sbjct: 433 YNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMI 492
Query: 213 EKGHKPS 219
+G P+
Sbjct: 493 GRGVSPN 499
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 121/283 (42%), Gaps = 40/283 (14%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV P+ YN LI+ C +++ A++ ++M I +++Y ++I GLG G+ KA
Sbjct: 495 GVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKA 554
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNY---------------------------------- 90
D+ +M GC PD YN+ I Y
Sbjct: 555 EDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYA 614
Query: 91 CIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMM--GTGCLP 148
C + + + EM++ L P+ YN + ++ + +L+ +M+ G C
Sbjct: 615 CRKEGVVTMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDK 674
Query: 149 NTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSF 208
T + + L L R +V L +DM KG + ++L LCD+ A +
Sbjct: 675 VTYNSLILAYL--RDRRVSEIKHLVDDMKAKGLVPKVDTYNILIKGLCDLKDFNGAYFWY 732
Query: 209 LEMIEKGHKPS-QVSFRRIKALMELANKQEALQNLSNKMALFG 250
EM+E+G + + ++ I L E +EA Q +S+++++ G
Sbjct: 733 REMVERGLLLNVSMCYQLISGLREEGMLREA-QIVSSELSIGG 774
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 73/157 (46%), Gaps = 1/157 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ +G+KP + +++ LI C+ V K+ ++M D+ PD Y +I G
Sbjct: 596 MKILGIKPTVGTFHPLI-YACRKEGVVTMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGN 654
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA + ++M + G D YN+ I Y +R+ + L+D+M KGL P TYN+
Sbjct: 655 VMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNI 714
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV 157
+ D ++ Y M+ G L N C L+
Sbjct: 715 LIKGLCDLKDFNGAYFWYREMVERGLLLNVSMCYQLI 751
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 69/149 (46%), Gaps = 1/149 (0%)
Query: 92 IAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQ 151
++K L +A+ L M + G P+ + N R S + ++ ++ +G P+
Sbjct: 99 VSKMLDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAV 158
Query: 152 SCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEM 211
+ V+ + ++ +L MV+ G G + +++ LC + ++ +A K F EM
Sbjct: 159 AYGKAVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEM 218
Query: 212 IEKGHKPSQVSFRR-IKALMELANKQEAL 239
I++ P+ V++ I ++ +EAL
Sbjct: 219 IQRNMVPNTVTYNTLIDGYCKVGGIEEAL 247
>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
Length = 586
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 116/226 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV+P++V+YN L+D +C ++++A K+ + M + +PDV+SY+++I G + +
Sbjct: 304 MIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQR 363
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA + +EM P+ Y+ + C RL+DA L EMV +G P+ +Y +
Sbjct: 364 IEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCI 423
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L + L + G+ P+ Q ++ R ++E A L++++ KG
Sbjct: 424 LLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKG 483
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ ++ + LC G L EA K F EM KG+ P+ ++ I
Sbjct: 484 LHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLI 529
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 110/223 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + +PD+V Y +ID CKDRQV +A+ + +M + ISP + +Y S+I L + +
Sbjct: 199 MEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCE 258
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+L EM P+ ++ + C ++ +A ++D M+++G+ PN TYN
Sbjct: 259 WKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNA 318
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+++ + ++ M+ G P+ S L+ + +++E A+ L+ +M K
Sbjct: 319 LMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKE 378
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ L LC +G+L +A F EM+ +G P VS+
Sbjct: 379 LIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSY 421
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 118/247 (47%), Gaps = 6/247 (2%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
++G +P+I ++N LI C + ++ + + +KM E P+V++Y ++I GL VG
Sbjct: 131 KLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTS 190
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
A +L+ M++ C PD Y + I + C +++ A L EM+ +G+SP+ TYN
Sbjct: 191 AAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLI 250
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
+ + L M+ + +PN +V ++ KV A + + M+++G
Sbjct: 251 HALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVE 310
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNL 242
++ + L D C ++ EA K F M+ KG P VS+ L N +Q +
Sbjct: 311 PNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYS------TLINGYCKIQRI 364
Query: 243 SNKMALF 249
M LF
Sbjct: 365 EKAMYLF 371
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 97/230 (42%), Gaps = 35/230 (15%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PD+VSY+ LI+ YCK +++EKA + E+M +++ P+ ++Y++++ GL VG+ A
Sbjct: 343 GFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDA 402
Query: 65 RDVLKEMKEYGCYPDAAAY-----------------------------------NAAIRN 89
+ EM G PD +Y I
Sbjct: 403 IALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDG 462
Query: 90 YCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPN 149
C A L A L + KGL PN TY + L + L+ M G PN
Sbjct: 463 MCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPN 522
Query: 150 TQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMG 199
+ + + R + +QL +M+ +GF + + S VL ++L D G
Sbjct: 523 GCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDG 572
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 91/227 (40%), Gaps = 2/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M M P I + L+ K + + +M I P++ + +I + +
Sbjct: 59 MLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQR 118
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A VL ++ + G P+ A +N IR C+ ++ + L D+M+ +G PN TY
Sbjct: 119 LGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGT 178
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEK 179
++ L M C P+ ++ LCK ++ V A L+++M+ +
Sbjct: 179 LINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQ-VTQAFNLFSEMIHQ 237
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G I + L LC++ + EM+ P+ V F +
Sbjct: 238 GISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTV 284
>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
Length = 609
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 114/223 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ GV+ +VS+N +I C+ ++ A + +M + ++PDV +Y ++I GL VG+
Sbjct: 266 MQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGR 325
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ AR V ++M G P+A + I +C L EM E+G+ P+A TYN
Sbjct: 326 IEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNA 385
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ DL+S+ + M G P+T + L+ ++E++++A+++ +MV +G
Sbjct: 386 IVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEG 445
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G + L L G+ +AE+ EM+E G +P ++
Sbjct: 446 VGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTY 488
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 101/206 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MRE GV+PD V+YN +++ C+ R ++ A IV +MR + PD ++YT++I G +
Sbjct: 371 MRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEE 430
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A ++ + M G D Y A I A R DA ++ EM+E GL P+ TTY +
Sbjct: 431 LDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTM 490
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F D+++ L M G P + ++ + +++ A L N M+ G
Sbjct: 491 VIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIG 550
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEK 206
+ ++L D C GK+ + E+
Sbjct: 551 VSPDDITYNILLDGHCKHGKVTDIEE 576
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 103/226 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E GV PD+ +Y LI C+ ++E A + EKM + P+ + +T +I G
Sbjct: 301 MSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGD 360
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ ++ +EM+E G PDA YNA + C A+ L+ ASG++ EM GL P+ TY
Sbjct: 361 AETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTT 420
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ +L + + M+ G + + L+ + + A ++ +M+E G
Sbjct: 421 LIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAG 480
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ D C G + + EM KG KP V++ I
Sbjct: 481 LEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVI 526
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 80/189 (42%)
Query: 35 KMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAK 94
++ D + P+ + ++ L +G+ A++V EM+ G ++N I C A
Sbjct: 230 QLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAG 289
Query: 95 RLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCM 154
L A L M E G++P+ TY + + + ++ +M G G PN
Sbjct: 290 DLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFT 349
Query: 155 FLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEK 214
L+ ++ E L+L +M E+G + + + + LC L A +EM
Sbjct: 350 ILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSA 409
Query: 215 GHKPSQVSF 223
G +P V++
Sbjct: 410 GLRPDTVTY 418
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 58/119 (48%), Gaps = 3/119 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G++PD +Y +ID +C+ V+ +++++M+++ P V++Y I+ G +GQ
Sbjct: 476 MMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQ 535
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
A +L M G PD YN + +C ++ D L KG P+ Y
Sbjct: 536 MKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKVTDIEELKS---AKGTVPDLGVYT 591
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 68/157 (43%)
Query: 70 EMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSN 129
++ + G P+A +N +R+ L A + DEM +G+ ++N +
Sbjct: 230 QLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAG 289
Query: 130 DLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSD 189
DL + L+ RM G P+ + L++ R ++E A ++ M +G +V
Sbjct: 290 DLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFT 349
Query: 190 VLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+L D C G + EM E+G +P V++ I
Sbjct: 350 ILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAI 386
>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Brachypodium distachyon]
Length = 757
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 119/259 (45%), Gaps = 37/259 (14%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G++PD+V++N +ID C+ RQ A ++E+M D++PD ++T+++ G G
Sbjct: 187 MSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGS 246
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A + M E GC P + N I YC R+ DA G + + + G P+ T++
Sbjct: 247 IEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFST 306
Query: 121 FFR--------------------------VFYWSN---------DLRSSWNLYCRMMGTG 145
F V+ +S +L + + +M+ +G
Sbjct: 307 FVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSG 366
Query: 146 CLPNTQSC-MFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEA 204
CLP+T + +V LC + ++E AL L ++ KG + ++L + LC +G A
Sbjct: 367 CLPDTTTFNTLIVALCT-ENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLA 425
Query: 205 EKSFLEMIEKGHKPSQVSF 223
+ F EM G P +V++
Sbjct: 426 VRLFEEMKSSGCTPDEVTY 444
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 109/227 (48%), Gaps = 2/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M EMG P V+ N LI+ YCK +V A +++ + PD +++++ + GL G
Sbjct: 257 MSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGH 316
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A VL M + GC PD Y+ I C L +A G++++MV+ G P+ TT+N
Sbjct: 317 VDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNT 376
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
N L + +L + G PN + L+ LCK + +A++L+ +M
Sbjct: 377 LIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDP-HLAVRLFEEMKSS 435
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G + ++L D LC GKL +A EM G S V++ I
Sbjct: 436 GCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTI 482
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 109/222 (49%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G +PD V+++ ++ C++ V+ A K++ M E PDV +Y+++I L G+ ++A
Sbjct: 296 GFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEA 355
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ ++ +M + GC PD +N I C +L +A L E+ KGLSPN T+N+
Sbjct: 356 KGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINA 415
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
D + L+ M +GC P+ + L+ K+ AL L +M G
Sbjct: 416 LCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQS 475
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + + D LC ++ EAE+ F +M G + ++F +
Sbjct: 476 TVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTL 517
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 112/249 (44%), Gaps = 3/249 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ P++ ++N LI+ CK A ++ E+M+ +PD ++Y +I L G+ KA
Sbjct: 401 GLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKA 460
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
D+LKEM+ GC YN I C +R+ +A + D+M G+ NA T+N
Sbjct: 461 LDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDG 520
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
+ + + L +M+ G PN + L CK Q + A + M GF
Sbjct: 521 LCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCK-QGNISKAADILQTMTANGFEV 579
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNL 242
++ L + LC + A K M KG KP+ ++ I++L N ++AL
Sbjct: 580 DVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLF 639
Query: 243 SNKMALFGP 251
+ GP
Sbjct: 640 REMTEVGGP 648
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 103/226 (45%), Gaps = 35/226 (15%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G PD ++N LI C + Q+E+A + ++ + +SP+V ++ +I L VG
Sbjct: 362 MVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGD 421
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
P A + +EMK GC PD YN I N C + +L A L+ EM G + TYN
Sbjct: 422 PHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYN- 480
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ LCKR+ ++E A ++++ M G
Sbjct: 481 ---------------------------------TIIDGLCKRR-RIEEAEEVFDQMDVTG 506
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G + + L D LC+ ++ +A + +MI +G +P+ V++ I
Sbjct: 507 IGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSI 552
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 100/225 (44%), Gaps = 1/225 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G V+YN +ID CK R++E+A ++ ++M I + I++ ++I GL +
Sbjct: 467 MEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAER 526
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A +++ +M G P+ YN+ + +YC + A+ ++ M G + TY
Sbjct: 527 IDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYAT 586
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ +++ L M G P ++ +++ R AL L+ +M E G
Sbjct: 587 LINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVG 646
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFL-EMIEKGHKPSQVSFR 224
++F LC G ++ FL EM + G P SFR
Sbjct: 647 GPPDAFTYKIVFRGLCRGGGPIKEAFDFLVEMADNGFIPEFSSFR 691
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 75/155 (48%), Gaps = 1/155 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G++P+ V+YN ++ YCK + KA I++ M DV++Y ++I GL + A
Sbjct: 541 GLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAA 600
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR- 123
+L+ M+ G P AYN I++ RDA L EM E G P+A TY + FR
Sbjct: 601 LKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDAFTYKIVFRG 660
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK 158
+ ++ +++ M G +P S L +
Sbjct: 661 LCRGGGPIKEAFDFLVEMADNGFIPEFSSFRMLAE 695
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/288 (20%), Positives = 111/288 (38%), Gaps = 36/288 (12%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDE-DISPDVISYTSIIGGLGLVG 59
MR G + + I Y + + + A+ +V D + + Y ++ L
Sbjct: 116 MRREGHEVGLGLVQSFIGSYARLQLFDDAFDLVSNQLDMFGVQANTEVYNHLLTVLAEGS 175
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ EM G PD +N I C A++ R A +++EM ++P+ TT+
Sbjct: 176 KIKLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFT 235
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCK-----------RQE--- 164
F + ++ L RM GC P + + L+ CK +QE
Sbjct: 236 TLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIAD 295
Query: 165 --------------------KVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEA 204
V+ AL++ M+++G + + + LC+ G+L EA
Sbjct: 296 GFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEA 355
Query: 205 EKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFGPS 252
+ +M++ G P +F + + N+ E +L+ ++ + G S
Sbjct: 356 KGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLS 403
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 42/223 (18%), Positives = 81/223 (36%), Gaps = 36/223 (16%)
Query: 37 RDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKE----------------------- 73
RD+ ++P Y II LG G D + ++ EM+
Sbjct: 82 RDDGLTPSRDVYEEIIRKLGTAGAFDLMKVLVGEMRREGHEVGLGLVQSFIGSYARLQLF 141
Query: 74 -------------YGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+G + YN + +++ EM +G+ P+ T+N
Sbjct: 142 DDAFDLVSNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNT 201
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ R++ + M P+ + L++ + +E AL+L M E G
Sbjct: 202 VIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMG 261
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ +VL + C +G++ +A + I G +P +V+F
Sbjct: 262 CSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTF 304
>gi|326522248|dbj|BAK07586.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 548
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 115/234 (49%), Gaps = 2/234 (0%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ PD+VS N L+ R ++ A K++++M I PDV++YT+++ A+
Sbjct: 201 ITPDLVSCNILLKGLVGVRDLDAALKVLDEMPGWGIVPDVVTYTTVLSAYCAKEDLKGAQ 260
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+ ++ G PD Y I YC +++DA+ +MDEM G+ PN TY++
Sbjct: 261 KLFDDIIAGGRVPDVTMYTVLIDGYCRTGKIQDAARIMDEMEAAGVQPNEVTYSVVIEAC 320
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ NL M+G G P+T +V + + K E A Q+W MV+K
Sbjct: 321 CKEGKSAEACNLMREMLGAGHTPDTPLAAKVVDVMCQDGKAEEAHQMWRWMVKKNVPPDN 380
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEA 238
+++ L LC G + EA K F E+ EKG+KPS +++ I L E QEA
Sbjct: 381 TITNTLIYWLCKSGMVREARKLFDEL-EKGYKPSLLTYNSLISGLCENGELQEA 433
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 119/250 (47%), Gaps = 9/250 (3%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PD+ Y LID YC+ +++ A +I+++M + P+ ++Y+ +I G+ +A
Sbjct: 270 GRVPDVTMYTVLIDGYCRTGKIQDAARIMDEMEAAGVQPNEVTYSVVIEACCKEGKSAEA 329
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++++EM G PD + C + +A + MV+K + P+ T N +
Sbjct: 330 CNLMREMLGAGHTPDTPLAAKVVDVMCQDGKAEEAHQMWRWMVKKNVPPDNTITN---TL 386
Query: 125 FYW---SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKG 180
YW S +R + L+ + G P+ + L+ LC+ E E A ++W+DMVE+
Sbjct: 387 IYWLCKSGMVREARKLFDEL-EKGYKPSLLTYNSLISGLCENGELQE-AGKVWDDMVERR 444
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ + + L C +GK E F EM+ KG PS+V ++ + + + +
Sbjct: 445 YEPNAMTYEALIKGFCKIGKPDEGAAVFTEMVTKGCAPSKVLYQVLVDSLSEPIHDDIVD 504
Query: 241 NLSNKMALFG 250
N+ AL G
Sbjct: 505 NIVQTAALSG 514
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 112/240 (46%), Gaps = 4/240 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ PD+V+Y ++ YC ++ A K+ + + PDV YT +I G G+
Sbjct: 231 MPGWGIVPDVVTYTTVLSAYCAKEDLKGAQKLFDDIIAGGRVPDVTMYTVLIDGYCRTGK 290
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A ++ EM+ G P+ Y+ I C + +A LM EM+ G +P+
Sbjct: 291 IQDAARIMDEMEAAGVQPNEVTYSVVIEACCKEGKSAEACNLMREMLGAGHTPDTPLAAK 350
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLP-NTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
V + ++ M+ P NT + + LCK V A +L++++ EK
Sbjct: 351 VVDVMCQDGKAEEAHQMWRWMVKKNVPPDNTITNTLIYWLCK-SGMVREARKLFDEL-EK 408
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEA 238
G+ +L + L LC+ G+L EA K + +M+E+ ++P+ +++ IK ++ E
Sbjct: 409 GYKPSLLTYNSLISGLCENGELQEAGKVWDDMVERRYEPNAMTYEALIKGFCKIGKPDEG 468
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 74/145 (51%), Gaps = 11/145 (7%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E G KP +++YN LI C++ ++++A K+ + M + P+ ++Y ++I G +G+PD
Sbjct: 407 EKGYKPSLLTYNSLISGLCENGELQEAGKVWDDMVERRYEPNAMTYEALIKGFCKIGKPD 466
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEK-GLSP----NATT 117
+ V EM GC P Y + + +++ + D ++D +V+ LS + +
Sbjct: 467 EGAAVFTEMVTKGCAPSKVLYQVLVDS--LSEPIHD--DIVDNIVQTAALSGRDFLDGDS 522
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMM 142
+ +F R N +WN + ++
Sbjct: 523 WEIFIRRVL--NTTSDTWNKHLSLV 545
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + V PD N LI CK V +A K+ +++ ++ P +++Y S+I GL G+
Sbjct: 371 MVKKNVPPDNTITNTLIYWLCKSGMVREARKLFDEL-EKGYKPSLLTYNSLISGLCENGE 429
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A V +M E P+A Y A I+ +C + + + + EMV KG +P+ Y +
Sbjct: 430 LQEAGKVWDDMVERRYEPNAMTYEALIKGFCKIGKPDEGAAVFTEMVTKGCAPSKVLYQV 489
Query: 121 F 121
Sbjct: 490 L 490
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 76/154 (49%), Gaps = 1/154 (0%)
Query: 71 MKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEK-GLSPNATTYNLFFRVFYWSN 129
+ + +P ++NA + + A+RLR A+ L K ++P+ + N+ +
Sbjct: 160 LPSFNSHPSVRSFNALLHSLVAARRLRLAAALFRAAPTKLYITPDLVSCNILLKGLVGVR 219
Query: 130 DLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSD 189
DL ++ + M G G +P+ + ++ +E ++ A +L++D++ G + +
Sbjct: 220 DLDAALKVLDEMPGWGIVPDVVTYTTVLSAYCAKEDLKGAQKLFDDIIAGGRVPDVTMYT 279
Query: 190 VLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
VL D C GK+ +A + EM G +P++V++
Sbjct: 280 VLIDGYCRTGKIQDAARIMDEMEAAGVQPNEVTY 313
>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
Length = 790
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 136/284 (47%), Gaps = 38/284 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDV--------------- 45
M E V DI ++N +I+VYCK V++A + + KM +SPD
Sbjct: 183 MLEEFVSMDIYTFNLMINVYCKMGFVKEAKQFMCKMIQAGLSPDYFTSTSFILGYCRSKD 242
Query: 46 ----------------ISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRN 89
+SY +I GL G+ D+A + MK+ CYP+ Y A I+
Sbjct: 243 VDSAFRVFEEMPNRNEVSYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKG 302
Query: 90 YCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPN 149
C K + A GL+DEM+E+ L P+ TYN + L S++ L M G +P+
Sbjct: 303 LC-RKNVHKAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPD 361
Query: 150 --TQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKS 207
T C F+ LCK +VE A +L++ + E+G + +++ VL D C +GK+ EA
Sbjct: 362 QRTYGC-FIDFLCKSN-RVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCL 419
Query: 208 FLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLSNKMALFG 250
F +M+ K P+ +F I L N +EAL +L ++M G
Sbjct: 420 FEKMLSKNCSPNAYTFNALIHGLCSAGNLKEAL-SLFDQMVKMG 462
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 118/263 (44%), Gaps = 39/263 (14%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E G+ PD +Y C ID CK +VE+A ++ + + +E +S +VI Y+ +I G VG+
Sbjct: 353 MKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGK 412
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + ++M C P+A +NA I C A L++A L D+MV+ GL P T+N+
Sbjct: 413 VDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNI 472
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
D + +MM +G P V +
Sbjct: 473 LIGRMLKQGDFDDAHKCLQKMMSSGEKP----------------------------VART 504
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
+ ++I ++ C GK+ EAE ++M E+G P ++ IKA +L A
Sbjct: 505 YNAFI-------EVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAF 557
Query: 240 QNLSNKMALFGPSMIPKREEYLA 262
L ++F P +L+
Sbjct: 558 DVLK---SMFDADCEPSHHTFLS 577
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 113/248 (45%), Gaps = 4/248 (1%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P++ +Y LI C+ + V KA ++++M + ++ PD+I+Y S+I G G D A +
Sbjct: 291 PNVYTYTALIKGLCR-KNVHKAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRL 349
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L MKE G PD Y I C + R+ +A L D + E+G+S N Y++ +
Sbjct: 350 LSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCK 409
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ + L+ +M+ C PN + L+ ++ AL L++ MV+ G +
Sbjct: 410 VGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYT 469
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMA 247
++L + G +A K +M+ G KP R A +E+ +Q + M
Sbjct: 470 FNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVA---RTYNAFIEVYCSAGKVQEAEDMMV 526
Query: 248 LFGPSMIP 255
+P
Sbjct: 527 QMKEEGVP 534
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 103/218 (47%), Gaps = 6/218 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G KP +YN I+VYC +V++A ++ +M++E + PD +YTS+I G +G
Sbjct: 493 MMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGL 552
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A DVLK M + C P + + I K+L D ++++ E G+ + ++
Sbjct: 553 TYSAFDVLKSMFDADCEPSHHTFLSLI------KQLFDKRYVVEKSGETGVESVSNFGDV 606
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + L+ M GC P+++ L+ + E + IAL+L + M ++G
Sbjct: 607 PGSNMWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEG 666
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
+V + + C + K EA +MI GH P
Sbjct: 667 ISPSEMVFNAVISCCCKLQKYGEAANIVEDMICSGHSP 704
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 109/241 (45%), Gaps = 7/241 (2%)
Query: 13 YNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMK 72
YN L+ + + V++ ++ +M +E +S D+ ++ +I +G +A+ + +M
Sbjct: 160 YNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINVYCKMGFVKEAKQFMCKMI 219
Query: 73 EYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLR 132
+ G PD + I YC +K + A + +EM + N +YN + +
Sbjct: 220 QAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNR----NEVSYNQLIHGLCEAGRID 275
Query: 133 SSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYILVSDVL 191
+ +L+ RM C PN + L+K LC++ V A+ L ++M+E+ ++ + L
Sbjct: 276 EAVSLFVRMKDDCCYPNVYTYTALIKGLCRKN--VHKAMGLLDEMLERNLVPDLITYNSL 333
Query: 192 FDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFGP 251
C G L A + M E+G P Q ++ + +N+ E + L + + G
Sbjct: 334 IAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGV 393
Query: 252 S 252
S
Sbjct: 394 S 394
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 66/150 (44%)
Query: 31 KIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNY 90
++ E+M +PD Y +I G+ V A +L +M++ G P +NA I
Sbjct: 622 ELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVISCC 681
Query: 91 CIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNT 150
C ++ +A+ ++++M+ G SP Y + +++ ++ G G +
Sbjct: 682 CKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVFKKLRGCGYNDDE 741
Query: 151 QSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L+ +Q VE QL+ +M + G
Sbjct: 742 IAWKILIDGMLKQGLVEEFSQLFEEMEKNG 771
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 58/121 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G+ P + +N +I CK ++ +A IVE M SP + ++I GL G+
Sbjct: 662 MQKEGISPSEMVFNAVISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGE 721
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++ V K+++ G D A+ I + + S L +EM + G + + TY++
Sbjct: 722 TERGNSVFKKLRGCGYNDDEIAWKILIDGMLKQGLVEEFSQLFEEMEKNGCNFSPRTYSI 781
Query: 121 F 121
Sbjct: 782 L 782
>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
Length = 819
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 109/225 (48%), Gaps = 2/225 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+++ GV P + YN LI+ CKD ++++A + M + + P+ ++Y+ +I G+
Sbjct: 346 VKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGK 405
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A L +M E G Y++ I +C +LR A L DEM+ GL PN Y
Sbjct: 406 LDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTS 465
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+ +L +++ LY M G G PNT + L+ LC E A +L+ +MVE
Sbjct: 466 LISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAE-ANKLFGEMVEW 524
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
+ +VL + C G V A + EM+EKG P ++R
Sbjct: 525 NVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYR 569
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 98/207 (47%), Gaps = 2/207 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ P+ V+Y+ LID +CK +++ A + KM + I V Y+S+I G +G+
Sbjct: 381 MGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGK 440
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A+ + EM G P+ Y + I YC L +A L EM KG+SPN T+
Sbjct: 441 LRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTA 500
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+N + + L+ M+ +PN + L++ CK V A +L ++MVEK
Sbjct: 501 LISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVR-AFELLDEMVEK 559
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEK 206
G L LC G++ EA +
Sbjct: 560 GLVPDTYTYRPLISGLCSTGRVSEARE 586
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 115/256 (44%), Gaps = 2/256 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G++ D+ +Y L+ CK + E +++ +M + P + ++++ GL G A
Sbjct: 280 GLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSA 339
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
D++ ++K++G P YNA I + C +L +A L + M KGL PN TY++
Sbjct: 340 FDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDS 399
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
F L + + +M G L+ + K+ A L+++M+ G
Sbjct: 400 FCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPN 459
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSN 244
+++ L C G+L A + + EM KG P+ +F + + + AN+ L
Sbjct: 460 VVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFG 519
Query: 245 KMALFGPSMIPKREEY 260
+M + ++IP Y
Sbjct: 520 EMVEW--NVIPNEVTY 533
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 117/269 (43%), Gaps = 44/269 (16%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E V P+ V+YN LI+ +CK+ +A++++++M ++ + PD +Y +I GL G+
Sbjct: 521 MVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGR 580
Query: 61 PDKARDVLKEMKEY--------GCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLS 112
+AR+ + +++ GC P+ Y A I C + A L EM+
Sbjct: 581 VSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSL 640
Query: 113 PNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV----KLCKRQEKVEI 168
PN TY F ++ + L+ ++ G L NT + L+ KL + QE E+
Sbjct: 641 PNQNTYACFLDYLTSEGNIEKAIQLHDVLL-EGFLANTVTYNILIRGFCKLGRIQEAAEV 699
Query: 169 -------------------------------ALQLWNDMVEKGFGSYILVSDVLFDLLCD 197
A++LW M+ +G + + L C
Sbjct: 700 LVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCV 759
Query: 198 MGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G+L +A + +M+ +G KP++ ++ +
Sbjct: 760 TGELTKAFELRDDMMRRGVKPNRATYNSL 788
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 105/227 (46%), Gaps = 2/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G + +YN I CK+++V +A +I + + + DV +Y +++ GL V +
Sbjct: 241 MESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEE 300
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ +++ EM E+G P AA + + + A L++++ + G++P+ YN
Sbjct: 301 FEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNA 360
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEK 179
L + +L+ M G PN + L+ CKR K+++AL M E
Sbjct: 361 LINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRG-KLDVALHFLGKMTEV 419
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G + + L C +GKL A+ F EMI G KP+ V + +
Sbjct: 420 GIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSL 466
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 104/223 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ P I + + +++ + RQ A + +++ + PDV YT+++ L +
Sbjct: 171 MMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKD 230
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR+V+ M+ GC A YN IR C +R+ +A + + + KGL + TY
Sbjct: 231 FIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCT 290
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + M+ G +P+ + LV +++ + A L N + + G
Sbjct: 291 LVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFG 350
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ V + L + +C GKL EAE F M KG P+ V++
Sbjct: 351 VAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTY 393
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 53/92 (57%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ PD +SY+ +I YC+ +++A K+ E M + ++PD ++Y +I G + G+
Sbjct: 703 MIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGE 762
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCI 92
KA ++ +M G P+ A YN+ I C+
Sbjct: 763 LTKAFELRDDMMRRGVKPNRATYNSLIHGTCL 794
Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV PD V+YN LI C ++ KA+++ + M + P+ +Y S+I G L+
Sbjct: 738 MLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLMSS 797
Query: 61 PDKARD 66
D
Sbjct: 798 VSSTAD 803
>gi|356509602|ref|XP_003523536.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Glycine max]
Length = 598
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 106/200 (53%), Gaps = 1/200 (0%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
KP + N L+ C+ ++++A++++ +R PDVI+Y ++I GL + + D+AR
Sbjct: 173 KPVTYTVNILMRGLCRAGEIDEAFRLLNDLRSFGCLPDVITYNTLIHGLCRINEVDRARS 232
Query: 67 VLKEMKEYGCY-PDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+LKE+ G + PD +Y I YC ++ + + L EM+ G +PN T+N F
Sbjct: 233 LLKEVCLNGEFAPDVVSYTTIISGYCKFSKMEEGNLLFGEMIRSGTAPNTFTFNALIGGF 292
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
D+ S+ LY +M+ GC+P+ + L+ R +V A+ +W+ M +K G+ +
Sbjct: 293 GKLGDMASALALYEKMLVQGCVPDVATFTSLINGYFRLGQVHQAMDMWHKMNDKNIGATL 352
Query: 186 LVSDVLFDLLCDMGKLVEAE 205
VL LC+ +L +A
Sbjct: 353 YTFSVLVSGLCNNNRLHKAR 372
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 108/229 (47%), Gaps = 11/229 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKM-RDEDISPDVISYTSIIGGLGLVG 59
+R G PD+++YN LI C+ +V++A +++++ + + +PDV+SYT+II G
Sbjct: 202 LRSFGCLPDVITYNTLIHGLCRINEVDRARSLLKEVCLNGEFAPDVVSYTTIISGYCKFS 261
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ ++ + EM G P+ +NA I + + A L ++M+ +G P+ T+
Sbjct: 262 KMEEGNLLFGEMIRSGTAPNTFTFNALIGGFGKLGDMASALALYEKMLVQGCVPDVATFT 321
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LC--KRQEKVEIALQLWN-- 174
++ + + +++ +M + LV LC R K L+L N
Sbjct: 322 SLINGYFRLGQVHQAMDMWHKMNDKNIGATLYTFSVLVSGLCNNNRLHKARDILRLLNES 381
Query: 175 DMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
D+V + F + + + D C G + EA K EM KP +++F
Sbjct: 382 DIVPQPF-----IYNPVIDGYCKSGNVDEANKIVAEMEVNRCKPDKLTF 425
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 76/161 (47%), Gaps = 6/161 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD+ ++ LI+ Y + QV +A + KM D++I + +++ ++ GL +
Sbjct: 308 MLVQGCVPDVATFTSLINGYFRLGQVHQAMDMWHKMNDKNIGATLYTFSVLVSGLCNNNR 367
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KARD+L+ + E P YN I YC + + +A+ ++ EM P+ T+ +
Sbjct: 368 LHKARDILRLLNESDIVPQPFIYNPVIDGYCKSGNVDEANKIVAEMEVNRCKPDKLTFTI 427
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLP------NTQSCMF 155
+ + ++ +M+ GC P N +SC+
Sbjct: 428 LIIGHCMKGRMPEAIGIFHKMLAVGCAPDEITVNNLRSCLL 468
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 100/242 (41%), Gaps = 3/242 (1%)
Query: 11 VSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKE 70
++Y+ L+ C+ A + + MR + PD ++ +VG+ D +R++L +
Sbjct: 72 LTYSLLLRSLCRSNLHHTAKVVYDWMRCDGQIPDNRLLGFLVWSYAIVGRLDVSRELLAD 131
Query: 71 MKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSND 130
++ +A YN ++ DA L E++ P T N+ R + +
Sbjct: 132 VQCNNVGVNAVVYNDLFNVLIRQNKVVDAVVLFRELIRLRYKPVTYTVNILMRGLCRAGE 191
Query: 131 LRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG-FGSYILVSD 189
+ ++ L + GCLP+ + L+ R +V+ A L ++ G F ++
Sbjct: 192 IDEAFRLLNDLRSFGCLPDVITYNTLIHGLCRINEVDRARSLLKEVCLNGEFAPDVVSYT 251
Query: 190 VLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLSNKMAL 248
+ C K+ E F EMI G P+ +F I +L + AL L KM +
Sbjct: 252 TIISGYCKFSKMEEGNLLFGEMIRSGTAPNTFTFNALIGGFGKLGDMASALA-LYEKMLV 310
Query: 249 FG 250
G
Sbjct: 311 QG 312
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 83/200 (41%), Gaps = 2/200 (1%)
Query: 29 AYKIVEKMRDE-DISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAI 87
+K VE R + +S ++Y+ ++ L A+ V M+ G PD +
Sbjct: 54 GFKFVEFCRHKLHMSHSYLTYSLLLRSLCRSNLHHTAKVVYDWMRCDGQIPDNRLLGFLV 113
Query: 88 RNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCL 147
+Y I RL + L+ ++ + NA YN F V N + + L+ ++
Sbjct: 114 WSYAIVGRLDVSRELLADVQCNNVGVNAVVYNDLFNVLIRQNKVVDAVVLFRELIRLRYK 173
Query: 148 PNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKS 207
P T + L++ R +++ A +L ND+ G ++ + L LC + ++ A
Sbjct: 174 PVTYTVNILMRGLCRAGEIDEAFRLLNDLRSFGCLPDVITYNTLIHGLCRINEVDRARSL 233
Query: 208 FLEMIEKGH-KPSQVSFRRI 226
E+ G P VS+ I
Sbjct: 234 LKEVCLNGEFAPDVVSYTTI 253
>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 114/219 (52%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV P+IV+YN LID CK +V A++IV+ M ++PD+++ ++ GL + D+A
Sbjct: 355 GVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQA 414
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ ++ E G PD +Y I C ++R+ +A L+ +M K L P+ TY+
Sbjct: 415 ILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDG 474
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
S + ++W L M G LP+T + L+ +++ ++ A+ L+N M+++G
Sbjct: 475 LCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPD 534
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ ++ D C ++ EA F EM K P V++
Sbjct: 535 VMCYTIMIDGYCKSERIDEAINLFREMHMKNLVPDIVTY 573
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 120/251 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ + + LID CK+ + +A ++ ++M + P++++ T+++GG L G
Sbjct: 246 MIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGN 305
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D AR++ + E+G D YN I YC R+RDA + DEM +G+ PN TYN
Sbjct: 306 VDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNS 365
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ +W + M +G P+ +C L+ + ++++ A+ L+N +VE G
Sbjct: 366 LIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESG 425
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ +L C ++ EA +M K P V++ + + + +
Sbjct: 426 LTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAW 485
Query: 241 NLSNKMALFGP 251
L N+M + GP
Sbjct: 486 RLLNEMHVKGP 496
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 108/218 (49%), Gaps = 4/218 (1%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E G K D+ +YN I YCK +V A ++ ++M E + P++++Y S+I L G+
Sbjct: 318 EWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVS 377
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
A +++K M G PD + C +KRL A L +++VE GL+P+ +Y +
Sbjct: 378 GAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILI 437
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPN--TQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
S + + NL M +P+ T SC+ + LC R ++ A +L N+M KG
Sbjct: 438 HGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCL-IDGLC-RSGRISNAWRLLNEMHVKG 495
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
+ +L D L L EA F +MI++G +P
Sbjct: 496 PLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEP 533
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 108/221 (48%), Gaps = 1/221 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ PDIV+ L+D CK +++++A + ++ + ++PDV SYT +I G +
Sbjct: 386 MHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRR 445
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++L++M P Y+ I C + R+ +A L++EM KG P+ TY++
Sbjct: 446 MGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSI 505
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L + L+ +M+ G P+ ++ + E+++ A+ L+ +M K
Sbjct: 506 LLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHMKN 565
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQV 221
I+ +LF+ + G E F+ +I + P +V
Sbjct: 566 LVPDIVTYTILFNAVFKSGS-NSYEWKFVNVIRDINPPPRV 605
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 106/230 (46%), Gaps = 8/230 (3%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDED--------ISPDVISYTSIIGGLG 56
G + VSY LI+ C++ +V +A ++ + E + +V+ Y+ +I L
Sbjct: 137 GFSLNEVSYGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLC 196
Query: 57 LVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNAT 116
G D+ + EM G P+ Y + IR C + + GL+DEM+ +GL +
Sbjct: 197 RNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVY 256
Query: 117 TYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDM 176
+ + + L + ++ M+ G PN +C L+ + V++A +L++ +
Sbjct: 257 VFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAI 316
Query: 177 VEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
E GF + +V C +G++ +A + F EM +G P+ V++ +
Sbjct: 317 GEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSL 366
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 103/254 (40%), Gaps = 37/254 (14%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
VK ++V Y+ +ID C++ V++ ++ +M + P+ +Y S+I GL VG+ +
Sbjct: 181 VKGNVVMYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGF 240
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNAT--------- 116
++ EM G + I C L +A + DEMV +G PN
Sbjct: 241 GLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGY 300
Query: 117 --------------------------TYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNT 150
TYN+F + +R + ++ M G +PN
Sbjct: 301 CLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNI 360
Query: 151 QSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFL 209
+ L+ LCK E V A ++ M G I+ +L D LC +L +A F
Sbjct: 361 VTYNSLIDCLCKAGE-VSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFN 419
Query: 210 EMIEKGHKPSQVSF 223
+++E G P S+
Sbjct: 420 QLVESGLTPDVWSY 433
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 81/209 (38%), Gaps = 45/209 (21%)
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
+G + + ++ + G D A N ++ C+ + A DE+V G S N +
Sbjct: 85 LGHVSFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVS 144
Query: 118 YNLFF-------RVFYWSNDLR------------------------------------SS 134
Y + RV N LR
Sbjct: 145 YGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEG 204
Query: 135 WNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFD 193
+ Y MMG G PN + L++ LC + +E L ++M+ +G + V VL D
Sbjct: 205 FEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLE-GFGLVDEMIRRGLDVSVYVFTVLID 263
Query: 194 LLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
LC G LVEA + F EM+ +G++P+ V+
Sbjct: 264 GLCKNGMLVEAREMFDEMVNRGYEPNIVT 292
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 46/87 (52%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G++PD++ Y +ID YCK ++++A + +M +++ PD+++YT + + G
Sbjct: 526 MIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHMKNLVPDIVTYTILFNAVFKSGS 585
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAI 87
+ +++ P Y AA+
Sbjct: 586 NSYEWKFVNVIRDINPPPRVLKYLAAL 612
>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 577
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 116/226 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV+P++V+YN L+D +C ++++A K+ + M + +PDV+SY+++I G + +
Sbjct: 295 MIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQR 354
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA + +EM P+ Y+ + C RL+DA L EMV +G P+ +Y +
Sbjct: 355 IEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCI 414
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L + L + G+ P+ Q ++ R ++E A L++++ KG
Sbjct: 415 LLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKG 474
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ ++ + LC G L EA K F EM KG+ P+ ++ I
Sbjct: 475 LHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLI 520
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 110/223 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + +PD+V Y +ID CKDRQV +A+ + +M + ISP + +Y S+I L + +
Sbjct: 190 MEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCE 249
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+L EM P+ ++ + C ++ +A ++D M+++G+ PN TYN
Sbjct: 250 WKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNA 309
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+++ + ++ M+ G P+ S L+ + +++E A+ L+ +M K
Sbjct: 310 LMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKE 369
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ L LC +G+L +A F EM+ +G P VS+
Sbjct: 370 LIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSY 412
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 118/247 (47%), Gaps = 6/247 (2%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
++G +P+I ++N LI C + ++ + + +KM E P+V++Y ++I GL VG
Sbjct: 122 KLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTS 181
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
A +L+ M++ C PD Y + I + C +++ A L EM+ +G+SP+ TYN
Sbjct: 182 AAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLI 241
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
+ + L M+ + +PN +V ++ KV A + + M+++G
Sbjct: 242 HALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVE 301
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNL 242
++ + L D C ++ EA K F M+ KG P VS+ L N +Q +
Sbjct: 302 PNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYS------TLINGYCKIQRI 355
Query: 243 SNKMALF 249
M LF
Sbjct: 356 EKAMYLF 362
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 97/230 (42%), Gaps = 35/230 (15%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PD+VSY+ LI+ YCK +++EKA + E+M +++ P+ ++Y++++ GL VG+ A
Sbjct: 334 GFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDA 393
Query: 65 RDVLKEMKEYGCYPDAAAY-----------------------------------NAAIRN 89
+ EM G PD +Y I
Sbjct: 394 IALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDG 453
Query: 90 YCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPN 149
C A L A L + KGL PN TY + L + L+ M G PN
Sbjct: 454 MCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPN 513
Query: 150 TQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMG 199
+ + + R + +QL +M+ +GF + + S VL ++L D G
Sbjct: 514 GCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDG 563
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 91/227 (40%), Gaps = 2/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M M P I + L+ K + + +M I P++ + +I + +
Sbjct: 50 MLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQR 109
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A VL ++ + G P+ A +N IR C+ ++ + L D+M+ +G PN TY
Sbjct: 110 LGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGT 169
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEK 179
++ L M C P+ ++ LCK ++ V A L+++M+ +
Sbjct: 170 LINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQ-VTQAFNLFSEMIHQ 228
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G I + L LC++ + EM+ P+ V F +
Sbjct: 229 GISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTV 275
>gi|357129397|ref|XP_003566348.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Brachypodium distachyon]
Length = 649
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 121/253 (47%), Gaps = 5/253 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+KPD+V +N +ID + ++ +A K+ E M+ + P+V +YT +I G+
Sbjct: 367 MLEKGMKPDVVVHNTMIDGLLRGQRRPEAVKMFELMKAKGPPPNVWTYTMLIRDHCKQGK 426
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A +EM+ GC P+ A Y + Y AKR+ + +++EM +KG P+ TYN
Sbjct: 427 LDMAMRCFEEMQVAGCQPEVATYTCLLVGYGNAKRMDRVTAMLEEMAQKGCPPDGRTYNA 486
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK---LCKRQEKVEIALQLWNDMV 177
++ N + +Y +M+ G P + ++K L R + A +W +M
Sbjct: 487 LIKLLTNRNMPDDAVRIYKKMITKGLEPTIHTYNMMMKSYFLGGRNYAMGCA--VWEEMH 544
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQE 237
KG + V + G+ EA K EMI+KG K Q+ + + A A K +
Sbjct: 545 RKGICPDVNSYTVFINGHIRHGRPAEACKFLEEMIQKGMKAPQIDYNKFAADFSKAGKPD 604
Query: 238 ALQNLSNKMALFG 250
L L+ K+ G
Sbjct: 605 ILYELAQKVKFTG 617
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 80/175 (45%), Gaps = 4/175 (2%)
Query: 46 ISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDE 105
++Y ++ LG Q + +++EM + G A+ AI+++ A +++A G+ +
Sbjct: 239 VTYCKMLHILGKARQFETMVALVQEMGKAGAL-CMDAFKIAIKSFAAAGEIKNAVGVFEM 297
Query: 106 MVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQE 164
M G ++N + + ++ RM P+ +S ++ C +
Sbjct: 298 MRVHGFDDGVESFNCLLVALAQEGLGKEAARVFDRMRDQ-YTPDLRSYTALMLAWCNARN 356
Query: 165 KVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
VE A ++WNDM+EKG ++V + + D L + EA K F M KG P+
Sbjct: 357 LVE-AGRVWNDMLEKGMKPDVVVHNTMIDGLLRGQRRPEAVKMFELMKAKGPPPN 410
>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 520
Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 123/243 (50%), Gaps = 6/243 (2%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
+PD+V Y+ +ID CKD+ V++AY + +M I PDVI+YT++I G L GQ +A
Sbjct: 147 RPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFG 206
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
+L EM P+ YN I C +++++ L+ M +KG+ P+ Y++ +
Sbjct: 207 LLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYC 266
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+++ + ++ M+ TG P+ S ++ + ++V+ A+ L +M+ K +
Sbjct: 267 LVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTV 326
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKM 246
L D LC +G++ EM +G + V++ +L++ K QNL +
Sbjct: 327 TYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYN---SLLDGLCKN---QNLDKAI 380
Query: 247 ALF 249
ALF
Sbjct: 381 ALF 383
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 107/222 (48%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G + D VSY L++ CK + A K++ + D PDV+ Y++II GL D+A
Sbjct: 110 GFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEA 169
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
D+ EM G +PD Y I +C+A +L +A GL++EM+ K ++PN TYN
Sbjct: 170 YDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDT 229
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
++ S NL M G P+ L+ +V+ A Q++ MV+ G
Sbjct: 230 LCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPD 289
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ +++ + LC ++ EA EM+ K P V++ +
Sbjct: 290 VYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSL 331
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 111/232 (47%), Gaps = 1/232 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GVKPD+V Y+ L+D YC +V+KA +I M ++PDV SY II GL +
Sbjct: 246 MTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKR 305
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A ++L+EM PD Y++ I C R+ L EM +G N TYN
Sbjct: 306 VDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNS 365
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ +L + L+ +M G PN + L+ + +++ L+ ++ KG
Sbjct: 366 LLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKG 425
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALME 231
+ + V+ LC G EA +M + G P+ V+F I++L+E
Sbjct: 426 YCIDVWTYTVMISGLCKEGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSLLE 477
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 118/224 (52%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ PD+++Y LI +C Q+ +A+ ++ +M ++I+P++ +Y ++I L G+
Sbjct: 176 MNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGK 235
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+++++L M + G PD Y+ + YC+ ++ A + MV+ G++P+ +YN+
Sbjct: 236 VKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNI 295
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+ + NL M+ +P+T + L+ LCK ++ L L +M +
Sbjct: 296 IINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLG-RITTILDLTKEMHHR 354
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G + ++ + L D LC L +A F++M E+G +P++ ++
Sbjct: 355 GQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTY 398
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 108/219 (49%), Gaps = 2/219 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV PD+ SYN +I+ CK ++V++A ++ +M +++ PD ++Y+S+I GL +G+
Sbjct: 281 MVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGR 340
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+ KEM G + YN+ + C + L A L +M E+G+ PN TY
Sbjct: 341 ITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTA 400
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTG-CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
L+ L+ ++ G C+ + + LCK + + AL + + M +
Sbjct: 401 LIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCK-EGMFDEALAMKSKMEDN 459
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
G + +++ L + + +AEK EMI KG P
Sbjct: 460 GCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKGLLP 498
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 119/258 (46%), Gaps = 2/258 (0%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
++G +P+ + N L+ C +V+K+ +K+ + D +SY ++ GL +G+
Sbjct: 73 KLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETR 132
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
A +L+ +++ PD Y+ I C K + +A L EM +G+ P+ TY
Sbjct: 133 CAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLI 192
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
F + L ++ L M+ PN + L+ ++ KV+ + L M +KG
Sbjct: 193 CGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVK 252
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNL 242
+++ +L D C +G++ +A++ FL M++ G P S+ I + + + NL
Sbjct: 253 PDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNL 312
Query: 243 SNKMALFGPSMIPKREEY 260
+M +MIP Y
Sbjct: 313 LREM--LHKNMIPDTVTY 328
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/252 (19%), Positives = 99/252 (39%), Gaps = 37/252 (14%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P I+ + ++ K + + ++M + I PD+++ + +I +GQ + V
Sbjct: 8 PPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSV 67
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR---- 123
L ++ + G P+ N ++ C+ ++ + D++V +G + +Y +
Sbjct: 68 LGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCK 127
Query: 124 ----------------------VFYWSNDLRS---------SWNLYCRMMGTGCLPNTQS 152
V +S + +++LY M G P+ +
Sbjct: 128 IGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVIT 187
Query: 153 CMFLV-KLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEM 211
L+ C + +E A L N+M+ K I + L D LC GK+ E++ M
Sbjct: 188 YTTLICGFCLAGQLME-AFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVM 246
Query: 212 IEKGHKPSQVSF 223
+KG KP V +
Sbjct: 247 TKKGVKPDVVIY 258
Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 40/207 (19%), Positives = 87/207 (42%), Gaps = 2/207 (0%)
Query: 43 PDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGL 102
P +I + I+G L + + K+M+ G PD + I +C ++ + +
Sbjct: 8 PPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSV 67
Query: 103 MDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGC-LPNTQSCMFLVKLCK 161
+ ++++ G PN N + +++ S + + +++ G + + L LCK
Sbjct: 68 LGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCK 127
Query: 162 RQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQV 221
E A++L + ++ +++ + D LC + EA + EM +G P +
Sbjct: 128 IGE-TRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVI 186
Query: 222 SFRRIKALMELANKQEALQNLSNKMAL 248
++ + LA + L N+M L
Sbjct: 187 TYTTLICGFCLAGQLMEAFGLLNEMIL 213
>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
Length = 695
Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 119/239 (49%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P++ ++N +ID CK+ ++ +A + +M+ SPDV++Y S+I G G G ++ +
Sbjct: 198 PNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQL 257
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
+ EM++ GC D YNA I + R+ A EM +G+ N T++ F F
Sbjct: 258 VSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCK 317
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
++ + L+ +M G +PN + LV + +++ A+ L ++MV +G ++
Sbjct: 318 EGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVT 377
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKM 246
V+ D LC GK+ EA+ M G K +++ + + + N E +L N+M
Sbjct: 378 YTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQM 436
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 115/248 (46%), Gaps = 4/248 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ P++V+Y ++D CK+ +V +A ++ M + + + YT++I G +
Sbjct: 366 MVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNN 425
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A D+L +MK G D + Y I C +++ +A L+ +M GL PN Y
Sbjct: 426 SERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTT 485
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ + + L +++ +G PN + C + LCK E A+ +N M E
Sbjct: 486 IMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISE-AISHFNKMREL 544
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEA 238
G + L D C +G L +A EMI+KG +V + I M+ AN Q+A
Sbjct: 545 GLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDA 604
Query: 239 LQNLSNKM 246
L KM
Sbjct: 605 FA-LKTKM 611
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 118/256 (46%), Gaps = 2/256 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G D+V+YN LI+ + K ++EKAY +M+ + + +V+++++ + G
Sbjct: 261 MRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGL 320
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + +M+ G P+ Y + + C A RL DA L+DEMV +GL PN TY +
Sbjct: 321 VQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTV 380
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + N+ M G N L+ E AL L N M KG
Sbjct: 381 MVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKG 440
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI-KALMELANKQEAL 239
+ + L LC K+ EA+ +M G +P+ V + I AL + + EA+
Sbjct: 441 MELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAV 500
Query: 240 QNLSNKM-ALFGPSMI 254
L + + F P+++
Sbjct: 501 ALLHKILDSGFQPNVV 516
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 86/172 (50%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G +P++V+Y LID CK + +A KMR+ + P+V +YT++I G +G +KA
Sbjct: 510 GFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKA 569
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++ EM + G D Y + I Y L+DA L +M+E GL + Y F
Sbjct: 570 MHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISG 629
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDM 176
F N ++ + + M+GTG P+ L++ ++ +E A L N+M
Sbjct: 630 FCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQKLGNMEEASSLQNEM 681
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 110/247 (44%), Gaps = 2/247 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G++ D+ Y LI CKD++V++A ++ KM + P+ + YT+I+ L G+
Sbjct: 436 MKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGK 495
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A +L ++ + G P+ Y A I C A + +A ++M E GL PN Y
Sbjct: 496 ESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTA 555
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F L + +L M+ G + L+ +Q ++ A L M+E G
Sbjct: 556 LIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESG 615
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEAL 239
+ C+M + EA EMI G P + + I+ +L N +EA
Sbjct: 616 LQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQKLGNMEEA- 674
Query: 240 QNLSNKM 246
+L N+M
Sbjct: 675 SSLQNEM 681
Score = 37.0 bits (84), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G++ D+ Y C I +C +++A ++ +M I+PD Y +I +G
Sbjct: 611 MIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQKLGN 670
Query: 61 PDKARDVLKEMKEY--GCYPDAAA 82
++A + EM+ C D A
Sbjct: 671 MEEASSLQNEMESVLSSCTEDDTA 694
>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62670, mitochondrial; Flags: Precursor
gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
Length = 630
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 120/239 (50%), Gaps = 1/239 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E + PD+ +++ LID + K+ ++ +A K+ ++M I P +++Y+S+I G + +
Sbjct: 317 MIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDR 376
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A+ + + M C+PD YN I+ +C KR+ + + EM ++GL N TYN+
Sbjct: 377 LDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNI 436
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + D + ++ M+ G PN + L+ + K+E A+ ++ +
Sbjct: 437 LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 496
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEA 238
I +++ + +C GK+ + F + KG KP V++ I +K+EA
Sbjct: 497 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEA 555
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 106/226 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++G +P+IV+ + L++ YC +++ +A +V++M P+ +++ ++I GL L +
Sbjct: 142 MMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNK 201
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++ M GC PD Y + C A L+++M + L P YN
Sbjct: 202 ASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNT 261
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + NL+ M G PN + L+ + A +L +DM+E+
Sbjct: 262 IIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK 321
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ L D GKLVEAEK + EM+++ PS V++ +
Sbjct: 322 INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSL 367
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 116/226 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + ++P ++ YN +ID CK + ++ A + ++M + I P+V++Y+S+I L G+
Sbjct: 247 MEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGR 306
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +L +M E PD ++A I + +L +A L DEMV++ + P+ TY+
Sbjct: 307 WSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSS 366
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + L + ++ M+ C P+ + L+K + ++VE ++++ +M ++G
Sbjct: 367 LINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRG 426
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ ++L L G A++ F EM+ G P+ +++ +
Sbjct: 427 LVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTL 472
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 106/219 (48%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G +PD+V+Y +++ CK + A+ ++ KM + P V+ Y +II GL D A
Sbjct: 216 GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDA 275
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++ KEM+ G P+ Y++ I C R DAS L+ +M+E+ ++P+ T++
Sbjct: 276 LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDA 335
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
F L + LY M+ P+ + L+ ++++ A Q++ MV K
Sbjct: 336 FVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 395
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + L C ++ E + F EM ++G + V++
Sbjct: 396 VVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTY 434
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 104/220 (47%), Gaps = 2/220 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P I+ ++ L+ K + + + E+M++ I + +Y+ +I Q A V
Sbjct: 79 PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAV 138
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L +M + G P+ ++ + YC +KR+ +A L+D+M G PN T+N +
Sbjct: 139 LGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFL 198
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYIL 186
N + L RM+ GC P+ + +V LCKR + ++A L N M + +L
Sbjct: 199 HNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGD-TDLAFNLLNKMEQGKLEPGVL 257
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + + D LC + +A F EM KG +P+ V++ +
Sbjct: 258 IYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSL 297
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 84/174 (48%), Gaps = 2/174 (1%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD+V+YN LI +CK ++VE+ ++ +M + + ++Y +I GL G D A+++
Sbjct: 394 PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEI 453
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
KEM G P+ YN + C +L A + + + + P TYN+
Sbjct: 454 FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 513
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKG 180
+ + W+L+C + G P+ + ++ C++ K E A L+ +M E G
Sbjct: 514 AGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEE-ADALFKEMKEDG 566
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 104/224 (46%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ +G+ + +Y+ LI+ +C+ Q+ A ++ KM P++++ +S++ G +
Sbjct: 107 MQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKR 166
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++ +M G P+ +N I + + +A L+D MV KG P+ TY +
Sbjct: 167 ISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGV 226
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
D ++NL +M P ++ LCK + ++ AL L+ +M K
Sbjct: 227 VVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKH-MDDALNLFKEMETK 285
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G ++ L LC+ G+ +A + +MIE+ P +F
Sbjct: 286 GIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTF 329
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 67/141 (47%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV P+I++YN L+D CK+ ++EKA + E ++ + P + +Y +I G+ G+ +
Sbjct: 461 GVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDG 520
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
D+ + G PD AYN I +C +A L EM E G PN+ YN R
Sbjct: 521 WDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRA 580
Query: 125 FYWSNDLRSSWNLYCRMMGTG 145
D +S L M G
Sbjct: 581 RLRDGDREASAELIKEMRSCG 601
>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
[Oryza sativa Japonica Group]
Length = 571
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 114/226 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+ P V++ LI+ YCK+ A ++ E+M+ + I+ V++Y S+I GL G+
Sbjct: 255 MVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGK 314
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++ +++EM++ G P+ + ++ +C + DA+ +D M E+ + P+ YN+
Sbjct: 315 VEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNI 374
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
V+ + + + M G PN + L+ R A L ++M EKG
Sbjct: 375 LIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKG 434
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ ++ +VL LC G++ +A K EM E G +P+ +++ I
Sbjct: 435 IEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTI 480
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 106/232 (45%), Gaps = 36/232 (15%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E V+PD+V YN LIDVY + ++E A + E M + ISP+V +Y +I G G
Sbjct: 360 MTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGD 419
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +L EMKE G D YN I C +R A L+DEM E GL PN TYN
Sbjct: 420 WRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNT 479
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ F +++S++ + RM + C+++ V
Sbjct: 480 IIQGFCDKGNIKSAYEIRTRM----------------EKCRKRANV-------------- 509
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIK-ALME 231
+ +V C +GK+ EA EM++K P+ +++ IK +ME
Sbjct: 510 -----VTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMME 556
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 98/220 (44%), Gaps = 38/220 (17%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
+P S N L+ ++V+ A K +SPD+ ++ ++I GL +GQ KA D
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCI---AKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
V K++K +G P A YN+ I YC A + L+ EMVE G+SP A T+ +
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLI- 271
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
N YC+ T A++++ +M ++G +
Sbjct: 272 ------------NGYCKNSNTAA----------------------AVRVFEEMKQQGIAA 297
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + L LC GK+ E K EM + G P++++F
Sbjct: 298 SVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITF 337
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 99/223 (44%), Gaps = 7/223 (3%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGL---GLVGQPD 62
V PDI ++N +I C+ Q+ KA + + ++ ++P V +Y S+I G G G
Sbjct: 187 VSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMY 246
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
+LKEM E G P A + I YC A + +EM ++G++ + TYN
Sbjct: 247 HVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLI 306
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPN--TQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L M G PN T C+ L CK+ + A + M E+
Sbjct: 307 SGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCV-LKGFCKKGMMAD-ANDWIDGMTERN 364
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+++ ++L D+ +GK+ +A M +KG P+ ++
Sbjct: 365 VEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTY 407
>gi|359487106|ref|XP_002274114.2| PREDICTED: pentatricopeptide repeat-containing protein At1g80550,
mitochondrial-like [Vitis vinifera]
Length = 571
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 108/215 (50%), Gaps = 3/215 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV + SY+ +D+ CK + +A K+ ++M+ + I DV++Y ++I +GL
Sbjct: 344 MDRRGVCKSLYSYSIYMDIQCKSGKPWRAVKLYKEMKKKGIRLDVVAYNTVIRAIGLSEG 403
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D + V +EMKE GC P+ YN I+ C R+R+A G+ D+M EKG +PN TY+
Sbjct: 404 VDFSIRVFREMKEVGCEPNVVTYNTIIKLLCENGRIREAYGVFDQMREKGYAPNVITYHC 463
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
FF + +++ RM+ +G P + + L+K R + +W M E+G
Sbjct: 464 FFGCIEKPKQILRTFD---RMINSGVRPRMDTYVMLMKKFGRWGFLRPVFIVWKKMEEQG 520
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
+ L D L G + A K EM+ KG
Sbjct: 521 CSPDACAYNALIDALVQKGMVDLARKYEEEMLAKG 555
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 96/211 (45%), Gaps = 4/211 (1%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKI-VEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
D SY+ LID C+ + V +A ++ +++ +D + DV Y I+ G +G K R+
Sbjct: 281 DETSYSNLIDALCEYKHVIEAEELFLKESKDLVFNDDVKIYNIILRGWFKMGWWKKCREF 340
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
+EM G +Y+ + C + + A L EM +KG+ + YN R
Sbjct: 341 WEEMDRRGVCKSLYSYSIYMDIQCKSGKPWRAVKLYKEMKKKGIRLDVVAYNTVIRAIGL 400
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
S + S ++ M GC PN + ++KL ++ A +++ M EKG+ ++
Sbjct: 401 SEGVDFSIRVFREMKEVGCEPNVVTYNTIIKLLCENGRIREAYGVFDQMREKGYAPNVIT 460
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
F + +++ ++F MI G +P
Sbjct: 461 YHCFFGCIEKPKQIL---RTFDRMINSGVRP 488
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 100/218 (45%), Gaps = 2/218 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P+ V++ + Y VE+A + + ++ D SY+++I L +A ++
Sbjct: 246 PNHVTFRFVFKRYAAAHLVEEAMNAYYRTEEFNLR-DETSYSNLIDALCEYKHVIEAEEL 304
Query: 68 -LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
LKE K+ D YN +R + + +EM +G+ + +Y+++ +
Sbjct: 305 FLKESKDLVFNDDVKIYNIILRGWFKMGWWKKCREFWEEMDRRGVCKSLYSYSIYMDIQC 364
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
S + LY M G + + +++ E V+ +++++ +M E G ++
Sbjct: 365 KSGKPWRAVKLYKEMKKKGIRLDVVAYNTVIRAIGLSEGVDFSIRVFREMKEVGCEPNVV 424
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
+ + LLC+ G++ EA F +M EKG+ P+ +++
Sbjct: 425 TYNTIIKLLCENGRIREAYGVFDQMREKGYAPNVITYH 462
>gi|356523854|ref|XP_003530549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g16890, mitochondrial-like [Glycine max]
Length = 678
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 120/239 (50%), Gaps = 2/239 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ ++ SYN +I+ +C+ + ++ A + M+ + P+++++ ++I G G DKA
Sbjct: 424 GLISNVFSYNMIINCFCRAKLMDNASEAFRDMQVRGVVPNLVTFNTLINGHCKDGAIDKA 483
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
R +L+ + E G PD +++ + C KR +A EM+E G++PNA YN+ R
Sbjct: 484 RKLLESLLENGLKPDIFTFSSIVDGLCQIKRTEEALECFTEMIEWGINPNAVIYNILIRS 543
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
D+ S L RM G P+T S L+++ R KVE A +L++ M G
Sbjct: 544 LCTIGDVARSVKLLRRMQKEGISPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGLNPD 603
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP-SQVSFRRIKALMELANKQEALQNL 242
+ L + G+L EA+K F M G P S + IK L++ +EA QN+
Sbjct: 604 NYTYSAFIEALSESGRLEEAKKMFYSMEANGCSPDSYICNLIIKILVQQEYVEEA-QNI 661
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 67/123 (54%), Gaps = 1/123 (0%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
+G+ P YN LID K ++ AY ++M ++ D +Y ++I G+ VG D+
Sbjct: 173 LGLSPTTRLYNALIDALVKSNSIDLAYLKFQQMAADNCVADRFTYNTLIHGVCKVGVVDE 232
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPN-ATTYNLFF 122
A ++++MK+ G +P+ Y I +CIA R+ +A G+ + M + G+ PN AT L
Sbjct: 233 ALRLVRQMKDKGHFPNVFTYTMLIEGFCIASRVDEAFGVFETMKDSGVYPNEATVRALVH 292
Query: 123 RVF 125
VF
Sbjct: 293 GVF 295
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 72/153 (47%), Gaps = 4/153 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+ P+ V YN LI C V ++ K++ +M+ E ISPD SY ++I + +
Sbjct: 525 MIEWGINPNAVIYNILIRSLCTIGDVARSVKLLRRMQKEGISPDTYSYNALIQIFCRMNK 584
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA+ + M G PD Y+A I + RL +A + M G SP++ NL
Sbjct: 585 VEKAKKLFDSMSRSGLNPDNYTYSAFIEALSESGRLEEAKKMFYSMEANGCSPDSYICNL 644
Query: 121 FFRVFYWSNDLRSSWNLY--CRMMGT--GCLPN 149
++ + + N+ CR G +PN
Sbjct: 645 IIKILVQQEYVEEAQNIIERCRQKGISLNSIPN 677
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 109/258 (42%), Gaps = 40/258 (15%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
D +YN LI CK V++A ++V +M+D+ P+V +YT +I G + + D+A V
Sbjct: 213 DRFTYNTLIHGVCKVGVVDEALRLVRQMKDKGHFPNVFTYTMLIEGFCIASRVDEAFGVF 272
Query: 69 KEMKEYGCYPDAAAYNAAIRNY--CI--AKRLRDASGLMD-------------------- 104
+ MK+ G YP+ A A + C+ +K L S +D
Sbjct: 273 ETMKDSGVYPNEATVRALVHGVFRCVDPSKALELLSEFLDREQEQERVHFMLACDTVLYC 332
Query: 105 --------EMV--------EKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLP 148
EMV G P + +N+ +LR + +++ + G
Sbjct: 333 LANNSMAKEMVVFLRRVLGRGGYFPGNSVFNVVMACLVKGAELRETCDVFEILRKQGVKA 392
Query: 149 NTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSF 208
+ + L+++ + E E +++ ++ G S + +++ + C + A ++F
Sbjct: 393 GIGAYLALIEVLYKNEWREEGDRVYGQLISDGLISNVFSYNMIINCFCRAKLMDNASEAF 452
Query: 209 LEMIEKGHKPSQVSFRRI 226
+M +G P+ V+F +
Sbjct: 453 RDMQVRGVVPNLVTFNTL 470
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/282 (19%), Positives = 118/282 (41%), Gaps = 43/282 (15%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G P++ +Y LI+ +C +V++A+ + E M+D + P+ + +++ G+
Sbjct: 240 MKDKGHFPNVFTYTMLIEGFCIASRVDEAFGVFETMKDSGVYPNEATVRALVHGVFRCVD 299
Query: 61 PDKARDVL--------------------------------KEMKEY--------GCYPDA 80
P KA ++L KEM + G +P
Sbjct: 300 PSKALELLSEFLDREQEQERVHFMLACDTVLYCLANNSMAKEMVVFLRRVLGRGGYFPGN 359
Query: 81 AAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWN-LYC 139
+ +N + LR+ + + + ++G+ Y V Y N+ R + +Y
Sbjct: 360 SVFNVVMACLVKGAELRETCDVFEILRKQGVKAGIGAYLALIEVLY-KNEWREEGDRVYG 418
Query: 140 RMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMG 199
+++ G + N S ++ R + ++ A + + DM +G ++ + L + C G
Sbjct: 419 QLISDGLISNVFSYNMIINCFCRAKLMDNASEAFRDMQVRGVVPNLVTFNTLINGHCKDG 478
Query: 200 KLVEAEKSFLEMIEKGHKPSQVSFRRI-KALMELANKQEALQ 240
+ +A K ++E G KP +F I L ++ +EAL+
Sbjct: 479 AIDKARKLLESLLENGLKPDIFTFSSIVDGLCQIKRTEEALE 520
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 60/139 (43%)
Query: 41 ISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDAS 100
+SP Y ++I L D A ++M C D YN I C + +A
Sbjct: 175 LSPTTRLYNALIDALVKSNSIDLAYLKFQQMAADNCVADRFTYNTLIHGVCKVGVVDEAL 234
Query: 101 GLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLC 160
L+ +M +KG PN TY + F ++ + ++ ++ M +G PN + LV
Sbjct: 235 RLVRQMKDKGHFPNVFTYTMLIEGFCIASRVDEAFGVFETMKDSGVYPNEATVRALVHGV 294
Query: 161 KRQEKVEIALQLWNDMVEK 179
R AL+L ++ +++
Sbjct: 295 FRCVDPSKALELLSEFLDR 313
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 58/135 (42%), Gaps = 1/135 (0%)
Query: 110 GLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIA 169
GLSP YN SN + ++ + +M C+ + + L+ + V+ A
Sbjct: 174 GLSPTTRLYNALIDALVKSNSIDLAYLKFQQMAADNCVADRFTYNTLIHGVCKVGVVDEA 233
Query: 170 LQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKA 228
L+L M +KG + +L + C ++ EA F M + G P++ + R +
Sbjct: 234 LRLVRQMKDKGHFPNVFTYTMLIEGFCIASRVDEAFGVFETMKDSGVYPNEATVRALVHG 293
Query: 229 LMELANKQEALQNLS 243
+ + +AL+ LS
Sbjct: 294 VFRCVDPSKALELLS 308
>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
Length = 797
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 105/223 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G++PD+V +N ++ C QV KA ++++ M PDVISYT++IGG LVG+
Sbjct: 474 MLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGR 533
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A L M G PD YN + YC A R+ DA G+ EM+ G++P TY+
Sbjct: 534 IDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYST 593
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + LY M+ +G N ++ + V+ A +L+ + K
Sbjct: 594 ILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKD 653
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
F I +++ L G+ +A F + G P ++
Sbjct: 654 FQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTY 696
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 111/226 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G++P++V+Y +ID CK + V++A + ++M D+ + PD +Y +I G +G+
Sbjct: 229 MMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGK 288
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ +L+EM +G PD Y + + C R R+A D M+ KG+ PN Y +
Sbjct: 289 WKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGI 348
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L +L M+ G P+ + ++ ++ A+ ++N M ++G
Sbjct: 349 LIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQG 408
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ L D LC +G++ +A F +M+ +G P+ F +
Sbjct: 409 LSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSL 454
Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 116/263 (44%), Gaps = 14/263 (5%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRD---EDISPDVISYTSIIGGLGL 57
M E+G PD+VSYN L+ +C +++ E+A +++ M D P+V+SY ++I G
Sbjct: 156 MPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVINGFFT 215
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
GQ DKA ++ EM + G P+ Y I C A+ + A G+ +M++KG+ P+ T
Sbjct: 216 EGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDT 275
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
YN + + + M G P+ + L+ + A ++ M+
Sbjct: 276 YNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMI 335
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI------KAL-- 229
KG + + +L G L E M+E G P F I KA+
Sbjct: 336 RKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMID 395
Query: 230 --MELANKQEALQNLSNKMALFG 250
M + NK + Q LS + FG
Sbjct: 396 EAMHIFNKMKQ-QGLSPDVVNFG 417
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 117/240 (48%), Gaps = 2/240 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GVKPD +YNCLI Y + ++ +++E+M + PD +Y S++ L G+
Sbjct: 264 MIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGR 323
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR M G P+ A Y I Y L + L++ MVE GLSP+ +N+
Sbjct: 324 CREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNI 383
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + + + +++ +M G P+ + L+ + +V+ A+ +N M+ +G
Sbjct: 384 IFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEG 443
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
I V + L LC + K +A++ + EM+ +G +P V F I L L K + ++
Sbjct: 444 VAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTI--LCNLCTKGQVMK 501
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 112/241 (46%), Gaps = 1/241 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV P+I +N L+ C + EKA + +M ++ I PDV+ + +I+ L GQ
Sbjct: 439 MMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQ 498
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA+ ++ M+ G PD +Y I +C+ R+ +A+ +D M+ GL P+ TYN
Sbjct: 499 VMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNT 558
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + ++ ++ M+ G P + ++ + A +L+ +M+ G
Sbjct: 559 LLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSG 618
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEAL 239
I + +++ + L + EA K F + K + +F I AL + ++A+
Sbjct: 619 KQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAM 678
Query: 240 Q 240
Sbjct: 679 H 679
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 100/217 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G+ PD+V++ LID CK +V+ A +M +E ++P++ + S++ GL V +
Sbjct: 404 MKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDK 463
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA++ EM G PD +N + N C ++ A L+D M G P+ +Y
Sbjct: 464 WEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTT 523
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + M+ G P+ + L+ R +++ A ++ +M+ G
Sbjct: 524 LIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNG 583
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHK 217
++ + L + EA++ +L MI G +
Sbjct: 584 ITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQ 620
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 98/218 (44%), Gaps = 6/218 (2%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
V PD+ +Y+ LI +C+ ++E + + + I ++ GL + +A
Sbjct: 90 VTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAM 149
Query: 66 DVL-KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVE---KGLSPNATTYNLF 121
D+L K M E GC PD +YN ++ +C KR +A L+ M + + PN +Y
Sbjct: 150 DILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATV 209
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKG 180
F+ + ++NL+ MM G PN + ++ LCK Q V+ A ++ M++KG
Sbjct: 210 INGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQ-VVDRAEGVFQQMIDKG 268
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
+ L +GK E + EM G KP
Sbjct: 269 VKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKP 306
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 96/226 (42%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+ PD +N + Y K +++A I KM+ + +SPDV+++ ++I L +G+
Sbjct: 369 MVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGR 428
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A +M G P+ +N+ + C + A EM+ +G+ P+ +N
Sbjct: 429 VDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNT 488
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + L M G P+ S L+ +++ A + + M+ G
Sbjct: 489 ILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVG 548
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ L C G++ +A F EM+ G P V++ I
Sbjct: 549 LKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTI 594
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 39/209 (18%), Positives = 72/209 (34%), Gaps = 38/209 (18%)
Query: 2 REM---GVKPDIVS-----------------------------------YNCLIDVYCKD 23
REM G+ P +V+ YN +++ K+
Sbjct: 577 REMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKN 636
Query: 24 RQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAY 83
V++A+K+ + + +D ++ ++ +IG L G+ + A + + YG PD Y
Sbjct: 637 NCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTY 696
Query: 84 NAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMG 143
N L + L M + G +PN+ N R D+ + ++
Sbjct: 697 CLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLSKLDE 756
Query: 144 TGCLPNTQSCMFLVKLCKRQEKVEIALQL 172
+ L+ L R E A L
Sbjct: 757 KNFSLEASTTAMLISLLSRDEYHHHATSL 785
>gi|302761712|ref|XP_002964278.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
gi|300168007|gb|EFJ34611.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
Length = 331
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 119/248 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + + P++V+YN LI+ CK ++E AY++ ++M + P +SY ++I G
Sbjct: 70 MVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKD 129
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A+DV +M C P+ Y I + +++ A+ ++D MV+KG++PN TY+
Sbjct: 130 LVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSC 189
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + + L +M+ G P + L+ R +K+E A +L+ M ++
Sbjct: 190 LIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRR 249
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
++ + L LC +L A + + EMI KG P +++ + + A K Q
Sbjct: 250 CHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQ 309
Query: 241 NLSNKMAL 248
L KM L
Sbjct: 310 ELMEKMKL 317
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 116/228 (50%), Gaps = 4/228 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+KPD YN ++ C++ +VE+A + EKM + I+P+V++Y ++I GL +
Sbjct: 35 MATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWR 94
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A ++ KEM G P +YN I +C K L A + D+MV PN TY
Sbjct: 95 IETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTT 154
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPN--TQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
S ++++ + M+ G PN T SC+ + CK + +V+ A +L MV
Sbjct: 155 LIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCL-IDGFCKVR-RVDEAHKLLEQMVT 212
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+G ++ ++L + LC KL +A K F M ++ P+ V++ +
Sbjct: 213 QGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTL 260
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 117/240 (48%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD ++Y +++ CK ++++ A VE+M I PD Y ++ GL + ++AR +
Sbjct: 7 PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 66
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
++M + P+ YN I C A R+ A L EM KG P +YN F
Sbjct: 67 FEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCK 126
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
DL ++ +++ +M+ + C+PN + L+ + KV+ A ++ + MV+KG +
Sbjct: 127 KKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVAT 186
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMA 247
L D C + ++ EA K +M+ +G P+ V++ + + A+K E L MA
Sbjct: 187 YSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMA 246
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 78/174 (44%), Gaps = 2/174 (1%)
Query: 78 PDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNL 137
PDA Y + C KR+ DA ++EM +G+ P+A YN + + L
Sbjct: 7 PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 66
Query: 138 YCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLC 196
+ +M+ PN + L+ LCK ++E A +L+ +M KG+ + + L D C
Sbjct: 67 FEKMVKQRINPNVVTYNTLINGLCKAW-RIETAYELFKEMAGKGYVPTEVSYNTLIDGFC 125
Query: 197 DMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFG 250
LV A+ F +M+ P+ V++ + + + K +A + + M G
Sbjct: 126 KKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKG 179
>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
Length = 667
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 115/223 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E VK D+ +Y+ +ID C+D ++ A + ++M + I +++Y S++GGL G+
Sbjct: 196 MDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGK 255
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ +LK+M P+ +N I + +L++A+ L EM+ KG+SPN TYN
Sbjct: 256 WNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNS 315
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ N L + N+ M+ C P+ + L+K + ++V+ ++L+ + ++G
Sbjct: 316 LMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRG 375
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + +L C GKL AE+ F EM+ G P +++
Sbjct: 376 LVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTY 418
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 121/223 (54%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + P+++++N LIDV+ K+ ++++A ++ ++M + ISP+ I+Y S++ G + +
Sbjct: 266 MTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNR 325
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++L M C PD + + I+ YC KR+ + L ++ ++GL N TY++
Sbjct: 326 LSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSI 385
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ F S L + L+ M+ G LP+ + L+ K+E AL+++ D+ +
Sbjct: 386 LVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSK 445
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I++ ++ + +C GK+ +A F + KG KP+ +++
Sbjct: 446 MNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTY 488
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 105/208 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+K +V+YN L+ CK + ++++ M I P+VI++ +I G+
Sbjct: 231 METKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGK 290
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++ KEM G P+ YN+ + YC+ RL +A+ ++D MV SP+ T+
Sbjct: 291 LQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTS 350
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + L+ ++ G + NT + LV+ + K+EIA +L+ +MV G
Sbjct: 351 LIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLG 410
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSF 208
++ +L D LCD GKL +A + F
Sbjct: 411 VLPDVMTYGILLDGLCDNGKLEKALEIF 438
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 100/221 (45%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
++G +PD ++N LI+ C + +V +A +V +M + P+V++Y SI+ G+ G
Sbjct: 128 KLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTS 187
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
A D+L++M E D Y+ I + C + A L EM KG+ + TYN
Sbjct: 188 LALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLV 247
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
+ L M +PN + L+ + ++ K++ A +L+ +M+ KG
Sbjct: 248 GGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGIS 307
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + L D C +L EA M+ P V+F
Sbjct: 308 PNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTF 348
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 112/244 (45%), Gaps = 3/244 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ +I + N +I+ +C+ + AY ++ K+ PD ++ ++I GL L + +A
Sbjct: 95 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEA 154
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++ M E GC P+ YN+ + C + A L+ +M E+ + + TY+
Sbjct: 155 VVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDS 214
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ ++ +L+ M G + + LV + K +QL DM +
Sbjct: 215 LCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPN 274
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSN 244
++ +VL D+ GKL EA + + EMI KG P+ +++ +LM+ Q L +N
Sbjct: 275 VITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITY---NSLMDGYCMQNRLSEANN 331
Query: 245 KMAL 248
+ L
Sbjct: 332 MLDL 335
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 72/145 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +GV PD+++Y L+D C + ++EKA +I E ++ ++ D++ YT II G+ G+
Sbjct: 406 MVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGK 465
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A ++ + G P+ Y I C L +A+ L+ +M E G PN TYN
Sbjct: 466 VEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNT 525
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTG 145
R DL +S L M G
Sbjct: 526 LIRAHLRDGDLTASAKLIEEMKSCG 550
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 93/212 (43%), Gaps = 37/212 (17%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ P+ ++YN L+D YC ++ +A +++ M + SPD++++TS+I G V + D+
Sbjct: 305 GISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEG 364
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF-- 122
+ +++ + G + Y+ ++ +C + +L A L EMV G+ P+ TY +
Sbjct: 365 MKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDG 424
Query: 123 --------RVFYWSNDLRSS-------------------------WNLYCRMMGTGCLPN 149
+ DL+ S WNL+C + G PN
Sbjct: 425 LCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPN 484
Query: 150 TQSCMFLVK-LCKRQEKVEIALQLWNDMVEKG 180
+ ++ LCK+ E + L M E G
Sbjct: 485 VMTYTVMISGLCKKGSLSEANI-LLRKMEEDG 515
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 89/191 (46%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ + V+Y+ L+ +C+ ++E A ++ ++M + PDV++Y ++ GL G+ +KA
Sbjct: 375 GLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKA 434
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++ +++++ D Y I C ++ DA L + KG+ PN TY +
Sbjct: 435 LEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISG 494
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
L + L +M G PN + L++ R + + +L +M GF +
Sbjct: 495 LCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSAD 554
Query: 185 ILVSDVLFDLL 195
++ D+L
Sbjct: 555 ASSIKMVIDML 565
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 96/233 (41%), Gaps = 3/233 (1%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P +V ++ +Q +KM I+ ++ + +I + A V
Sbjct: 63 PSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIMINCFCRCCKTCFAYSV 122
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L ++ + G PD +N I C+ ++ +A L+ MVE G PN TYN
Sbjct: 123 LGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICK 182
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
S D + +L +M + + ++ R ++ A+ L+ +M KG S ++
Sbjct: 183 SGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVT 242
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ L LC GK + + +M + P+ ++F L+++ K+ LQ
Sbjct: 243 YNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITF---NVLIDVFVKEGKLQ 292
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 85/204 (41%)
Query: 23 DRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAA 82
D + + A + ++M P ++ ++ G+ Q + D K+M+ G +
Sbjct: 43 DIKEDDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYT 102
Query: 83 YNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMM 142
N I +C + A ++ ++++ G P+ TT+N + + + L RM+
Sbjct: 103 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMV 162
Query: 143 GTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLV 202
GC PN + +V + +AL L M E+ + + + D LC G +
Sbjct: 163 ENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCID 222
Query: 203 EAEKSFLEMIEKGHKPSQVSFRRI 226
A F EM KG K S V++ +
Sbjct: 223 AAISLFKEMETKGIKSSLVTYNSL 246
>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
Length = 578
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 114/226 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+ P V++ LI+ YCK+ A ++ E+M+ + I+ V++Y S+I GL G+
Sbjct: 255 MVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGK 314
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++ +++EM++ G P+ + ++ +C + DA+ +D M E+ + P+ YN+
Sbjct: 315 VEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNI 374
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
V+ + + + M G PN + L+ R A L ++M EKG
Sbjct: 375 LIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKG 434
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ ++ +VL LC G++ +A K EM E G +P+ +++ I
Sbjct: 435 IEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTI 480
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 104/230 (45%), Gaps = 35/230 (15%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E V+PD+V YN LIDVY + ++E A + E M + ISP+V +Y +I G G
Sbjct: 360 MTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGD 419
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +L EMKE G D YN I C +R A L+DEM E GL PN TYN
Sbjct: 420 WRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNT 479
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ F +++S++ + RM + C+++ V
Sbjct: 480 IIQGFCDKGNIKSAYEIRTRM----------------EKCRKRANV-------------- 509
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALM 230
+ +V C +GK+ EA EM++K P+ +++ IK M
Sbjct: 510 -----VTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGM 554
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 98/220 (44%), Gaps = 38/220 (17%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
+P S N L+ ++V+ A K +SPD+ ++ ++I GL +GQ KA D
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCI---AKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
V K++K +G P A YN+ I YC A + L+ EMVE G+SP A T+ +
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLI- 271
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
N YC+ T A++++ +M ++G +
Sbjct: 272 ------------NGYCKNSNTAA----------------------AVRVFEEMKQQGIAA 297
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + L LC GK+ E K EM + G P++++F
Sbjct: 298 SVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITF 337
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 99/223 (44%), Gaps = 7/223 (3%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGL---GLVGQPD 62
V PDI ++N +I C+ Q+ KA + + ++ ++P V +Y S+I G G G
Sbjct: 187 VSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMY 246
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
+LKEM E G P A + I YC A + +EM ++G++ + TYN
Sbjct: 247 HVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLI 306
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPN--TQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L M G PN T C+ L CK+ + A + M E+
Sbjct: 307 SGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCV-LKGFCKKGMMAD-ANDWIDGMTERN 364
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+++ ++L D+ +GK+ +A M +KG P+ ++
Sbjct: 365 VEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTY 407
>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
Length = 425
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 120/239 (50%), Gaps = 1/239 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E + PD+ +++ LID + K+ ++ +A K+ ++M I P +++Y+S+I G + +
Sbjct: 112 MIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDR 171
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A+ + + M C+PD YN I+ +C KR+ + + EM ++GL N TYN+
Sbjct: 172 LDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNI 231
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + D + ++ M+ G PN + L+ + K+E A+ ++ +
Sbjct: 232 LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 291
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEA 238
I +++ + +C GK+ + F + KG KP V++ I +K+EA
Sbjct: 292 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEA 350
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 116/226 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + ++P ++ YN +ID CK + ++ A + ++M + I P+V++Y+S+I L G+
Sbjct: 42 MEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGR 101
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +L +M E PD ++A I + +L +A L DEMV++ + P+ TY+
Sbjct: 102 WSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSS 161
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + L + ++ M+ C P+ + L+K + ++VE ++++ +M ++G
Sbjct: 162 LINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRG 221
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ ++L L G A++ F EM+ G P+ +++ +
Sbjct: 222 LVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTL 267
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 106/219 (48%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G +PD+V+Y +++ CK + A+ ++ KM + P V+ Y +II GL D A
Sbjct: 11 GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDA 70
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++ KEM+ G P+ Y++ I C R DAS L+ +M+E+ ++P+ T++
Sbjct: 71 LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDA 130
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
F L + LY M+ P+ + L+ ++++ A Q++ MV K
Sbjct: 131 FVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 190
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + L C ++ E + F EM ++G + V++
Sbjct: 191 VVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTY 229
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 84/174 (48%), Gaps = 2/174 (1%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD+V+YN LI +CK ++VE+ ++ +M + + ++Y +I GL G D A+++
Sbjct: 189 PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEI 248
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
KEM G P+ YN + C +L A + + + + P TYN+
Sbjct: 249 FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 308
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKG 180
+ + W+L+C + G P+ + ++ C++ K E A L+ +M E G
Sbjct: 309 AGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEE-ADALFKEMKEDG 361
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 67/141 (47%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV P+I++YN L+D CK+ ++EKA + E ++ + P + +Y +I G+ G+ +
Sbjct: 256 GVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDG 315
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
D+ + G PD AYN I +C +A L EM E G PN+ YN R
Sbjct: 316 WDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRA 375
Query: 125 FYWSNDLRSSWNLYCRMMGTG 145
D +S L M G
Sbjct: 376 RLRDGDREASAELIKEMRSCG 396
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 98/214 (45%), Gaps = 9/214 (4%)
Query: 32 IVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYC 91
++++M + PD+++Y ++ GL G D A ++L +M++ P YN I C
Sbjct: 3 LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 62
Query: 92 IAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF----YWSNDLRSSWNLYCRMMGTGCL 147
K + DA L EM KG+ PN TY+ WS+ R L M+
Sbjct: 63 KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASR----LLSDMIERKIN 118
Query: 148 PNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKS 207
P+ + L+ ++ K+ A +L+++MV++ I+ L + C +L EA++
Sbjct: 119 PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQM 178
Query: 208 FLEMIEKGHKPSQVSFRR-IKALMELANKQEALQ 240
F M+ K P V++ IK + +E ++
Sbjct: 179 FEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGME 212
>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 108/226 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G++P V YN LID +C ++ A ++M + ISP + +Y S+I L + +
Sbjct: 317 MVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQR 376
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A ++KE++E G PDA YN I YC + A L DEM+ G+ P TY
Sbjct: 377 TDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTS 436
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
V N ++ + +L+ ++ G LP+ L+ V+ A +L DM
Sbjct: 437 LLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMK 496
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + + C GK+ EA + F EM +G KP +SF +
Sbjct: 497 VPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTL 542
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 104/223 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GVKP+IV+YN ++ YC +VE A I+ M+ + I PD +Y S+I G+ G+
Sbjct: 247 METSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGR 306
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A + +EM + G P A YN I +C L AS DEM++KG+SP +TYN
Sbjct: 307 LEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNS 366
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + + G P+ + L+ R + A L ++M+ G
Sbjct: 367 LIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASG 426
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
L +L ++ EA+ F ++ +G P + F
Sbjct: 427 IKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMF 469
Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 123/253 (48%), Gaps = 6/253 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + +K + ++N +I+V CK+ +++KA V M + P++++Y +I+ G G+
Sbjct: 212 MFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGR 271
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A +L MK PD+ Y + I C RL +AS + +EMV+KGL P+A YN
Sbjct: 272 VEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNT 331
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F +L + M+ G P + L+ +++ + A + ++ EKG
Sbjct: 332 LIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKG 391
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFL---EMIEKGHKPSQVSFRRIKALMELANKQE 237
+ ++L + C + A+K+FL EM+ G KP++ ++ + ++ N+ +
Sbjct: 392 ISPDAITYNILINGYC---RCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMK 448
Query: 238 ALQNLSNKMALFG 250
+L K+ G
Sbjct: 449 EADDLFKKITSEG 461
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 109/223 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
++E G+ PD ++YN LI+ YC+ +KA+ + ++M I P +YTS++ L +
Sbjct: 387 IQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNR 446
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A D+ K++ G PDA +NA I +C ++ A L+ +M + P+ T+N
Sbjct: 447 MKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNT 506
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + L+ M G P+ S L+ R+ ++ A ++ N+M++ G
Sbjct: 507 IMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTG 566
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
F +L + L LC + AE+ EM+ KG P ++
Sbjct: 567 FNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTY 609
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 100/223 (44%), Gaps = 1/223 (0%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
+G K IV ++ LI C + ++A++ M+++ + P + + S++ + + +
Sbjct: 146 LGFKSSIV-FDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEA 204
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
A + EM +N I C +L+ A + M G+ PN TYN
Sbjct: 205 AWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVH 264
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
+ S + ++ + M P++ + L+ +Q ++E A +++ +MV+KG
Sbjct: 265 GYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRP 324
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ + L D C+ G L A EM++KG P+ ++ +
Sbjct: 325 SAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSL 367
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 42/67 (62%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G P +++YN L+ CK+++ + A +++++M + ++PD +Y ++I G+ V
Sbjct: 562 MLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNI 621
Query: 61 PDKARDV 67
PD+ ++
Sbjct: 622 PDENKNT 628
>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
Length = 528
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 107/219 (48%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ PD+ +YN LI+ +CK+ V+KA +I E M + V++YT++I L GQ +
Sbjct: 282 GLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQET 341
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ E G PD YNA I ++ + + A +M EM +K ++P+ TYN R
Sbjct: 342 DKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRG 401
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + L M G P+ + L+ + V+ AL++ N+M+ KGF
Sbjct: 402 LCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPT 461
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+L + L LC G+ +AE EM+E G P ++
Sbjct: 462 LLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTY 500
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 114/225 (50%), Gaps = 3/225 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDE-DISPDVISYTSIIGGLGLVG 59
+R+M +P+ V+YN +I +C +V+ A I+ +MR+ I+P+ +Y ++I G VG
Sbjct: 137 LRQM-PRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVG 195
Query: 60 QPDKARDVLKEMKEYG-CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
+ D+A V EM G P+A YNA I YC +L A D MVE+G++ TY
Sbjct: 196 RVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATY 255
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
NL + ++ L M G G P+ + L+ ++ V+ AL+++ +M
Sbjct: 256 NLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSR 315
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+G + ++ L L G++ E +K F E + +G +P V +
Sbjct: 316 RGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLY 360
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 88/154 (57%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G++PD+V YN LI+ + +++A++I+ +M + I+PD ++Y +++ GL L+G+ D+A
Sbjct: 352 GIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEA 411
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
R ++ EM E G PD YN I Y + ++DA + +EM+ KG +P TYN +
Sbjct: 412 RKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQG 471
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK 158
+ + N+ M+ G P+ + + L++
Sbjct: 472 LCKNGQGDDAENMVKEMVENGITPDDSTYISLIE 505
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 110/231 (47%), Gaps = 5/231 (2%)
Query: 1 MREM----GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDE-DISPDVISYTSIIGGL 55
MREM G+ P+ +Y +I +CK +V++A K+ ++M + ++ P+ + Y ++IGG
Sbjct: 168 MREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGY 227
Query: 56 GLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNA 115
G+ D A M E G A YN + + R +A L++EM KGL+P+
Sbjct: 228 CDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDV 287
Query: 116 TTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWND 175
TYN+ +++ + ++ M G + L+ ++ +V+ +L+++
Sbjct: 288 FTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDE 347
Query: 176 MVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
V +G +++ + L + G + A + EM +K P V++ +
Sbjct: 348 AVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTL 398
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 53/87 (60%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G++PD+V+YN LI Y V+ A +I +M ++ +P +++Y ++I GL GQ
Sbjct: 418 MTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQ 477
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAI 87
D A +++KEM E G PD + Y + I
Sbjct: 478 GDDAENMVKEMVENGITPDDSTYISLI 504
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 80/168 (47%), Gaps = 8/168 (4%)
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEK-GLSPNATT 117
G+P +A ++L++M P+A YN I +C R++ A +M EM E+ G++PN T
Sbjct: 128 GKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYT 183
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMF--LVKLCKRQEKVEIALQLWND 175
Y + + + ++ M+ G + ++ M+ L+ Q K++ AL +
Sbjct: 184 YGTVISGWCKVGRVDEAVKVFDEMLTKGEV-KPEAVMYNALIGGYCDQGKLDTALLYRDR 242
Query: 176 MVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
MVE+G + ++L L G+ EA + EM KG P ++
Sbjct: 243 MVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTY 290
Score = 44.3 bits (103), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 33/55 (60%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGL 55
M G P +++YN LI CK+ Q + A +V++M + I+PD +Y S+I GL
Sbjct: 453 MMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 507
>gi|359489321|ref|XP_002269223.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 889
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 130/261 (49%), Gaps = 4/261 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
++EMG P+ + YN L++ Y K R++++A + E+MR + I+PD I++ ++ G G+
Sbjct: 362 LKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGR 421
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ +LK++ G PD + ++ ++ C A RL +A + +M+EKGLSP+ +N
Sbjct: 422 EEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNS 481
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + ++ Y M+ G P+ +C L+ +++ A +L M+EKG
Sbjct: 482 VIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKG 541
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ VL D G +V A+ + EM +G P V+F A ++ +KQ ++
Sbjct: 542 LSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAF---SAFIDGLSKQGLVE 598
Query: 241 NLSNK-MALFGPSMIPKREEY 260
N + + +IP Y
Sbjct: 599 EAYNVFLEMLRKGLIPNNFAY 619
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 77/150 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ P+ +YN LI +CK ++ +A K+ + MR + PD+ + IIGGL G+
Sbjct: 607 MLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGR 666
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +V +M + G PD YN I YC A + +A L++ M G +P+ TTYN+
Sbjct: 667 MRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNI 726
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNT 150
F S + + + ++ G +PNT
Sbjct: 727 RIHGFCSSRRMNRAVLMLDELVSAGIVPNT 756
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 1/178 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G+ PDI + N +I CK ++ A + M +SPD+I+Y ++I G
Sbjct: 642 MRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFD 701
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +++ M G PD YN I +C ++R+ A ++DE+V G+ PN TYN
Sbjct: 702 MVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGIVPNTVTYNS 761
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
S+ L + L R++ +PN + L+ +Q E L + + E
Sbjct: 762 MLNGV-CSDILDRAMILTARLLKMAFVPNVVTANLLLSQFYKQGMPERTLMWGHKLSE 818
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 94/196 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ PD+V+++ ID K VE+AY + +M + + P+ +Y S+I G G+
Sbjct: 572 MERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGK 631
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A + K M+ G PD N I C R+R A + +M + GLSP+ TYN
Sbjct: 632 LNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNT 691
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + D+ ++ NL RM +G P+ + + ++ A+ + +++V G
Sbjct: 692 LINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAG 751
Query: 181 FGSYILVSDVLFDLLC 196
+ + + + +C
Sbjct: 752 IVPNTVTYNSMLNGVC 767
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 102/224 (45%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+ + +++ L+D + K V A + +M I PDV+++++ I GL G
Sbjct: 537 MIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGL 596
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A +V EM G P+ AYN+ I +C +L +A L M +GL P+ T N+
Sbjct: 597 VEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNM 656
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+RS+ N++ M TG P+ + L+ CK + V A L N M
Sbjct: 657 IIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVN-ADNLVNRMYAS 715
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G + ++ C ++ A E++ G P+ V++
Sbjct: 716 GSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGIVPNTVTY 759
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 115/290 (39%), Gaps = 35/290 (12%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MRE+GV+P L + + +K+ + + P +++ II G G
Sbjct: 222 MREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGIILGFCRKGC 281
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+L M ++ C P+A AYN I CI R DA + M+E+G +P T+N
Sbjct: 282 IHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFNT 341
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F ++ + L+ + G PN L+ + +++ A L+ +M +KG
Sbjct: 342 VINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKG 401
Query: 181 F------------GSY-------------------ILVSDVLFDL----LCDMGKLVEAE 205
G Y +L LFD+ LC G+L EA
Sbjct: 402 IAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAM 461
Query: 206 KSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFGPSMIP 255
+ ++M+EKG PS ++F + A A ++ M FG + P
Sbjct: 462 EFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSP 511
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 106/259 (40%), Gaps = 37/259 (14%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+ P I+++N +I Y + +KA++ + M ++P + +S++ GL + G+
Sbjct: 467 MLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGR 526
Query: 61 PDKARDVLK-----------------------------------EMKEYGCYPDAAAYNA 85
+A +++ EM+ G +PD A++A
Sbjct: 527 LQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSA 586
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
I + +A + EM+ KGL PN YN F L + L M G
Sbjct: 587 FIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRG 646
Query: 146 CLPNT-QSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEA 204
LP+ + M + LCK Q ++ A+ ++ DM + G I+ + L + C +V A
Sbjct: 647 LLPDIFTTNMIIGGLCK-QGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNA 705
Query: 205 EKSFLEMIEKGHKPSQVSF 223
+ M G P ++
Sbjct: 706 DNLVNRMYASGSNPDLTTY 724
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/234 (20%), Positives = 95/234 (40%), Gaps = 4/234 (1%)
Query: 28 KAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAI 87
+A +I+ +MR+ + P + L VG + K++ G P ++ I
Sbjct: 214 QALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGII 273
Query: 88 RNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCL 147
+C + L+ M + PNA YN+ + + M+ GC
Sbjct: 274 LGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCN 333
Query: 148 PNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEK 206
P + ++ CK VE A +L++ + E GF ++ + L + M ++ +A
Sbjct: 334 PTVVTFNTVINAFCKEGNVVE-ARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANM 392
Query: 207 SFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFGPSMIPKREEY 260
+ EM +KG P ++F + + ++E L +++ G ++P R +
Sbjct: 393 LYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLG--LLPDRSLF 444
>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
Length = 436
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 119/248 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + + P++V+YN LI+ CK ++E AY++ ++M + P +SY ++I G
Sbjct: 175 MVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKD 234
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A+DV +M C P+ Y I + +++ A+ ++D MV+KG++PN TY+
Sbjct: 235 LVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSC 294
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + + L +M+ G P + L+ R +K+E A +L+ M ++
Sbjct: 295 LIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRR 354
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
++ + L LC +L A + + EMI KG P +++ + + A K Q
Sbjct: 355 CHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQ 414
Query: 241 NLSNKMAL 248
L KM L
Sbjct: 415 ELMEKMKL 422
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 115/225 (51%), Gaps = 4/225 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+KPD YN ++ C++ +VE+A + EKM + I+P+V++Y ++I GL +
Sbjct: 140 MATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWR 199
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A ++ KEM G P +YN I +C K L A + D+MV PN TY
Sbjct: 200 IETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTT 259
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPN--TQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
S ++++ + M+ G PN T SC+ + CK + +V+ A +L MV
Sbjct: 260 LIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCL-IDGFCKVR-RVDEAHKLLEQMVT 317
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+G ++ ++L + LC KL +A K F M ++ P+ V++
Sbjct: 318 QGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTY 362
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 108/216 (50%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD ++Y +++ CK ++++ A VE+M I PD Y ++ GL + ++AR +
Sbjct: 112 PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 171
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
++M + P+ YN I C A R+ A L EM KG P +YN F
Sbjct: 172 FEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCK 231
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
DL ++ +++ +M+ + C+PN + L+ + KV+ A ++ + MV+KG +
Sbjct: 232 KKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVAT 291
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
L D C + ++ EA K +M+ +G P+ V++
Sbjct: 292 YSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTY 327
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 107/224 (47%), Gaps = 3/224 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G Y LI CK ++AYK++ MR + I+Y++II L + +
Sbjct: 36 MVEAGYTLRASGYGILISCLCKVGNFDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNR 95
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++AR+++++M Y PDA Y + C KR+ DA ++EM +G+ P+A YN
Sbjct: 96 VEEARELIEKMARYA-PPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNF 154
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+ + L+ +M+ PN + L+ LCK ++E A +L+ +M K
Sbjct: 155 VLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAW-RIETAYELFKEMAGK 213
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G+ + + L D C LV A+ F +M+ P+ V++
Sbjct: 214 GYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTY 257
>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 108/226 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G++P V YN LID +C ++ A ++M + ISP + +Y S+I L + +
Sbjct: 317 MVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQR 376
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A ++KE++E G PDA YN I YC + A L DEM+ G+ P TY
Sbjct: 377 TDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTS 436
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
V N ++ + +L+ ++ G LP+ L+ V+ A +L DM
Sbjct: 437 LLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMK 496
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + + C GK+ EA + F EM +G KP +SF +
Sbjct: 497 VPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTL 542
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 104/223 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GVKP+IV+YN ++ YC +VE A I+ M+ + I PD +Y S+I G+ G+
Sbjct: 247 METSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGR 306
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A + +EM + G P A YN I +C L AS DEM++KG+SP +TYN
Sbjct: 307 LEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNS 366
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + + G P+ + L+ R + A L ++M+ G
Sbjct: 367 LIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASG 426
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
L +L ++ EA+ F ++ +G P + F
Sbjct: 427 IKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMF 469
Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 123/253 (48%), Gaps = 6/253 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + +K + ++N +I+V CK+ +++KA V M + P++++Y +I+ G G+
Sbjct: 212 MFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGR 271
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A +L MK PD+ Y + I C RL +AS + +EMV+KGL P+A YN
Sbjct: 272 VEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNT 331
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F +L + M+ G P + L+ +++ + A + ++ EKG
Sbjct: 332 LIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKG 391
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFL---EMIEKGHKPSQVSFRRIKALMELANKQE 237
+ ++L + C + A+K+FL EM+ G KP++ ++ + ++ N+ +
Sbjct: 392 ISPDAITYNILINGYC---RCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMK 448
Query: 238 ALQNLSNKMALFG 250
+L K+ G
Sbjct: 449 EADDLFKKITSEG 461
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 108/223 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
++E G+ PD ++YN LI+ YC+ +KA+ + ++M I P +YTS++ L +
Sbjct: 387 IQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNR 446
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A D+ K++ G PD +NA I +C ++ A L+ +M + P+ T+N
Sbjct: 447 MKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNT 506
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + L+ M G P+ S L+ R+ ++ A ++ N+M++ G
Sbjct: 507 IMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTG 566
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
F +L + L LC + AE+ EM+ KG P ++
Sbjct: 567 FNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTY 609
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 100/223 (44%), Gaps = 1/223 (0%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
+G K IV ++ LI C + ++A++ M+++ + P + + S++ + + +
Sbjct: 146 LGFKSSIV-FDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEA 204
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
A + EM +N I C +L+ A + M G+ PN TYN
Sbjct: 205 AWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVH 264
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
+ S + ++ + M P++ + L+ +Q ++E A +++ +MV+KG
Sbjct: 265 GYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRP 324
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ + L D C+ G L A EM++KG P+ ++ +
Sbjct: 325 SAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSL 367
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 42/67 (62%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G P +++YN L+ CK+++ + A +++++M + ++PD +Y ++I G+ V
Sbjct: 562 MLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNI 621
Query: 61 PDKARDV 67
PD+ ++
Sbjct: 622 PDENKNT 628
>gi|297744958|emb|CBI38550.3| unnamed protein product [Vitis vinifera]
Length = 795
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 124/258 (48%), Gaps = 18/258 (6%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
MGVK D+ +YN LI +C+ + +A + + M + I D+I+Y ++I G + K
Sbjct: 535 MGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKK 594
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
A V +M G P+ YN + A+ +++A+GL+++M E+GL PNATTY++
Sbjct: 595 AFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVS 654
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
+++ LYC M+ G +P T++ L+ + +K+ A +L +M +G
Sbjct: 655 GHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPP 714
Query: 184 YILVSDVLFDLLCDMGKL---------------VEAEKSFLEMIEKGHKPSQVSFRRIKA 228
D+ L+C KL EA++ F EM EKG P + + I
Sbjct: 715 NSSTYDI---LICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISF 771
Query: 229 LMELANKQEALQNLSNKM 246
+ K+ Q + NK+
Sbjct: 772 TLAKPGKKADAQRILNKL 789
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 106/218 (48%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
++ + +N LID YC++ ++ +A +++E M+ E +PD+++Y +++ G +G A+
Sbjct: 13 IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
++ E+ P+ Y I YC ++ L DA + DEM K L P+ TY
Sbjct: 73 KLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGL 132
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
S + + +++ M G +PN S L+ ++ V A L MV +G G +
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDV 192
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+V L D L G AE F ++E+ P+ V++
Sbjct: 193 VVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTY 230
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 122/285 (42%), Gaps = 35/285 (12%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR++G+ PD ++N +I+ YCK+ + A K++ +M+ + P+ I+ ++ L G+
Sbjct: 427 MRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGE 486
Query: 61 PDKARDVLKEMKEYGCYP-----------------------------------DAAAYNA 85
+K D+L +M G +P D + YN
Sbjct: 487 IEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNT 546
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
I +C +R A+ + +M+ KG+ + TYN + S+ L+ ++ ++ +M+ G
Sbjct: 547 LISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEG 606
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
PN ++ L+ ++ A L N M E+G D+L +G + E
Sbjct: 607 VSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECV 666
Query: 206 KSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFG 250
K + EMI KG P ++ + + K + L +M + G
Sbjct: 667 KLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRG 711
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 116/247 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E+GV P+ SY LID K+ V +A+ + +M I DV+ YT+++ GL G
Sbjct: 148 MEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGM 207
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A D+ + + E P+ Y+A I +C + L+ EM EK + PN Y+
Sbjct: 208 ANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSS 267
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L + ++ +M+ LPN L+ + ++ IAL L+ +M +G
Sbjct: 268 IVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRG 327
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
V D + L G++ EA++ F +M+ +G P +V++ + A K+
Sbjct: 328 LEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAF 387
Query: 241 NLSNKMA 247
N++ +M
Sbjct: 388 NIAQEMT 394
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 104/223 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M MG P ++ ++D K R+ + + +++ + D+ +Y ++I +G
Sbjct: 497 MLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGM 556
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A V K+M G D YNA I YCI+ L+ A + +M+ +G+SPN TYN+
Sbjct: 557 IRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNI 616
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ + L +M G +PN + LV + ++ ++L+ +M+ KG
Sbjct: 617 LLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKG 676
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
F +VL K+ +A++ EM +G P+ ++
Sbjct: 677 FVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTY 719
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 117/249 (46%), Gaps = 3/249 (1%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E + P+ V+Y+ LID +CK V K ++++M ++ I P+VI Y+SI+ G G +
Sbjct: 220 EESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLN 279
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
+A DV+++M + P+ Y I Y A + A L EM +GL N + F
Sbjct: 280 EAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFV 339
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
S + + L+ MM G LP+ + ++ + K A + +M EK G
Sbjct: 340 NNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSG 399
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQN 241
++ +VL + L +GK E+E M + G P +F I A + N AL+
Sbjct: 400 FDVVAYNVLINGLFKLGKY-ESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALK- 457
Query: 242 LSNKMALFG 250
L N+M +G
Sbjct: 458 LLNEMKSYG 466
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 103/214 (48%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
++P++++Y LID YCK + +E A + ++M + + PDV++YT I+ GL G+ ++A+
Sbjct: 83 LEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAK 142
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
V +EM+E G P+ +Y I + + +A L MV +G+ + Y
Sbjct: 143 SVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGL 202
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ + ++ +++ ++ +PN + L+ + V L +M EK +
Sbjct: 203 FKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNV 262
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
+V + D G L EA +M+++ P+
Sbjct: 263 IVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPN 296
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 97/210 (46%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ D+V Y L+D K A + + + +E + P+ ++Y+++I G +G +K
Sbjct: 187 GIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKG 246
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+L+EM+E +P+ Y++ + Y L +A +M +MV++ + PN Y
Sbjct: 247 ELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDG 306
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
++ ++ + +L+ M G N V KR ++E A +L+ DM+ +G
Sbjct: 307 YFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPD 366
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEK 214
+ + D GK +A EM EK
Sbjct: 367 RVNYTSMMDGFFKAGKESDAFNIAQEMTEK 396
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 99/226 (43%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G PDIV+YN L++ +CK + A K++ ++ ++ P+VI+YT++I
Sbjct: 43 MKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQC 102
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A + EM PD Y + C + ++ +A + EM E G+ PN +Y
Sbjct: 103 LEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYAT 162
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ ++ L RM+ G + L+ + A ++ ++E+
Sbjct: 163 LIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEES 222
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ L D C +G + + E EM EK P+ + + I
Sbjct: 223 LVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSI 268
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 90/219 (41%), Gaps = 39/219 (17%)
Query: 1 MREM---GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGL 57
MR+M + P++ Y LID Y K Q A + ++M+ + + S + L
Sbjct: 285 MRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKR 344
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEK-------- 109
G+ ++A ++ K+M G PD Y + + + A + DA + EM EK
Sbjct: 345 SGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVA 404
Query: 110 --------------------------GLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMG 143
GL+P++ T+N + +L ++ L M
Sbjct: 405 YNVLINGLFKLGKYESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKS 464
Query: 144 TGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEKGF 181
G PN+ +C LV +LC E +E + L NDM+ GF
Sbjct: 465 YGLKPNSITCNILVQRLCAAGE-IEKTMDLLNDMLVMGF 502
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 86/212 (40%), Gaps = 37/212 (17%)
Query: 40 DISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDA 99
+I V + +I G G+ +A ++L+ MK G PD YN + +C L A
Sbjct: 12 EIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTA 71
Query: 100 SGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKL 159
LM E+ L PN TY + YC+ + CL
Sbjct: 72 KKLMGEISLVNLEPNVITYTTLI-------------DAYCK---SQCL------------ 103
Query: 160 CKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
E AL ++++M K ++ + + LC GK+ EA+ F EM E G P+
Sbjct: 104 -------EDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPN 156
Query: 220 QVSFRR-IKALMELANKQEALQNLSNKMALFG 250
+ S+ I +L + N EA L +M + G
Sbjct: 157 RFSYATLIDSLFKEGNVAEAFV-LQGRMVVRG 187
>gi|297817834|ref|XP_002876800.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
lyrata]
gi|297322638|gb|EFH53059.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
lyrata]
Length = 1010
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 101/219 (46%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G KP + +YN +ID CK+ VE A + E+M+ + PD ++Y S+I G G VG+ D
Sbjct: 90 GAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGKVGRLDDT 149
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+EMK+ C PD YNA I +C +L EM GL PN +Y+
Sbjct: 150 VCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVSYSTLVDA 209
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
F ++ + Y M G +PN + L+ + + A +L N+M++ G
Sbjct: 210 FCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEMLQVGVEWN 269
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ L D LC E EM+E K + V+F
Sbjct: 270 VVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTF 308
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 119/270 (44%), Gaps = 7/270 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G+ PD V+YN +ID + K +++ E+M+D PDVI+Y ++I G+
Sbjct: 121 MKFRGLIPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGK 180
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
K + +EMK G P+ +Y+ + +C ++ A +M GL PN TY
Sbjct: 181 LPKGLEFFREMKRNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTS 240
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+ +L ++ L M+ G N + L+ LC + E L L ++MVE
Sbjct: 241 LIDAYCKIGNLSDAFRLANEMLQVGVEWNVVTYTALIDGLCGWENPTE-GLHLLDEMVEL 299
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEK--GHKPSQVSFRRIKALMELANKQE 237
++ VL D LC KLV + I G + + + + + N+ E
Sbjct: 300 DIKVTVVTFCVLIDGLCK-NKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKGNQVE 358
Query: 238 ALQNLSNKMALFGPSMIPKREEYLAEMSAS 267
A L +MA G ++P R Y + M +
Sbjct: 359 AATTLFEQMAQKG--LVPDRTAYTSLMDGN 386
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 112/277 (40%), Gaps = 37/277 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G+KP++VSY+ L+D +CK+ +++A K MR + P+ +YTS+I +G
Sbjct: 191 MKRNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGN 250
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEK----------- 109
A + EM + G + Y A I C + + L+DEMVE
Sbjct: 251 LSDAFRLANEMLQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCV 310
Query: 110 -------------------------GLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGT 144
GL NA Y N + ++ L+ +M
Sbjct: 311 LIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQK 370
Query: 145 GCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEA 204
G +P+ + L+ +Q V AL L + MVE G +L L L +L +A
Sbjct: 371 GLVPDRTAYTSLMDGNFKQGNVLEALALRDKMVETGMKLDLLAYTSLVWGLSHCNQLQKA 430
Query: 205 EKSFLEMIEKGHKPSQV-SFRRIKALMELANKQEALQ 240
EMI +G P +V +K EL EA++
Sbjct: 431 RSFLEEMIGEGIHPDEVLCISVLKKHYELGCINEAVE 467
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 99/249 (39%), Gaps = 1/249 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ V P S N L+ + K + + + + M P V +Y +I + G
Sbjct: 51 MKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGAKPTVFTYNIMIDCMCKEGD 110
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ AR + +EMK G PD YN+ I + RL D +EM + P+ TYN
Sbjct: 111 VEAARGLFEEMKFRGLIPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNA 170
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F L + M G PN S LV ++ ++ A++ + DM G
Sbjct: 171 LINCFCKFGKLPKGLEFFREMKRNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVG 230
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
L D C +G L +A + EM++ G + + V++ I L N E L
Sbjct: 231 LVPNEYTYTSLIDAYCKIGNLSDAFRLANEMLQVGVEWNVVTYTALIDGLCGWENPTEGL 290
Query: 240 QNLSNKMAL 248
L + L
Sbjct: 291 HLLDEMVEL 299
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 101/244 (41%), Gaps = 2/244 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P ++ L V VE+A + KM+ + P S ++ +G+ D +
Sbjct: 23 PGFGVFDALFSVLIDLGMVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRF 82
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
K+M G P YN I C + A GL +EM +GL P+ TYN F
Sbjct: 83 FKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGK 142
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
L + + M C P+ + L+ + K+ L+ + +M G ++
Sbjct: 143 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVS 202
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLSNKM 246
L D C G + +A K +++M G P++ ++ I A ++ N +A + L+N+M
Sbjct: 203 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFR-LANEM 261
Query: 247 ALFG 250
G
Sbjct: 262 LQVG 265
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 66/135 (48%), Gaps = 8/135 (5%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ PD +Y L+D K V +A + +KM + + D+++YTS++ GL Q
Sbjct: 367 MAQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMVETGMKLDLLAYTSLVWGLSHCNQ 426
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNY----CIAKRLRDASGLMDEMVEKGLSPNAT 116
KAR L+EM G +PD + ++ + CI + + S LM + + NA
Sbjct: 427 LQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCINEAVELQSYLMKHQLLTSDNDNAL 486
Query: 117 TYNLFFR---VFYWS 128
N++ F+W+
Sbjct: 487 P-NIYLDPNPCFFWT 500
>gi|225454948|ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Vitis vinifera]
Length = 835
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 124/258 (48%), Gaps = 18/258 (6%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
MGVK D+ +YN LI +C+ + +A + + M + I D+I+Y ++I G + K
Sbjct: 535 MGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKK 594
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
A V +M G P+ YN + A+ +++A+GL+++M E+GL PNATTY++
Sbjct: 595 AFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVS 654
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
+++ LYC M+ G +P T++ L+ + +K+ A +L +M +G
Sbjct: 655 GHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPP 714
Query: 184 YILVSDVLFDLLCDMGKL---------------VEAEKSFLEMIEKGHKPSQVSFRRIKA 228
D+ L+C KL EA++ F EM EKG P + + I
Sbjct: 715 NSSTYDI---LICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISF 771
Query: 229 LMELANKQEALQNLSNKM 246
+ K+ Q + NK+
Sbjct: 772 TLAKPGKKADAQRILNKL 789
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 106/218 (48%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
++ + +N LID YC++ ++ +A +++E M+ E +PD+++Y +++ G +G A+
Sbjct: 13 IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
++ E+ P+ Y I YC ++ L DA + DEM K L P+ TY
Sbjct: 73 KLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGL 132
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
S + + +++ M G +PN S L+ ++ V A L MV +G G +
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDV 192
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+V L D L G AE F ++E+ P+ V++
Sbjct: 193 VVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTY 230
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 122/285 (42%), Gaps = 35/285 (12%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR++G+ PD ++N +I+ YCK+ + A K++ +M+ + P+ I+ ++ L G+
Sbjct: 427 MRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGE 486
Query: 61 PDKARDVLKEMKEYGCYP-----------------------------------DAAAYNA 85
+K D+L +M G +P D + YN
Sbjct: 487 IEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNT 546
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
I +C +R A+ + +M+ KG+ + TYN + S+ L+ ++ ++ +M+ G
Sbjct: 547 LISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEG 606
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
PN ++ L+ ++ A L N M E+G D+L +G + E
Sbjct: 607 VSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECV 666
Query: 206 KSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFG 250
K + EMI KG P ++ + + K + L +M + G
Sbjct: 667 KLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRG 711
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 116/247 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E+GV P+ SY LID K+ V +A+ + +M I DV+ YT+++ GL G
Sbjct: 148 MEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGM 207
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A D+ + + E P+ Y+A I +C + L+ EM EK + PN Y+
Sbjct: 208 ANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSS 267
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L + ++ +M+ LPN L+ + ++ IAL L+ +M +G
Sbjct: 268 IVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRG 327
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
V D + L G++ EA++ F +M+ +G P +V++ + A K+
Sbjct: 328 LEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAF 387
Query: 241 NLSNKMA 247
N++ +M
Sbjct: 388 NIAQEMT 394
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 104/223 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M MG P ++ ++D K R+ + + +++ + D+ +Y ++I +G
Sbjct: 497 MLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGM 556
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A V K+M G D YNA I YCI+ L+ A + +M+ +G+SPN TYN+
Sbjct: 557 IRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNI 616
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ + L +M G +PN + LV + ++ ++L+ +M+ KG
Sbjct: 617 LLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKG 676
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
F +VL K+ +A++ EM +G P+ ++
Sbjct: 677 FVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTY 719
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 115/244 (47%), Gaps = 3/244 (1%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P+ V+Y+ LID +CK V K ++++M ++ I P+VI Y+SI+ G G ++A DV
Sbjct: 225 PNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDV 284
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
+++M + P+ Y I Y A + A L EM +GL N + F
Sbjct: 285 MRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKR 344
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
S + + L+ MM G LP+ + ++ + K A + +M EK G ++
Sbjct: 345 SGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVA 404
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLSNKM 246
+VL + L +GK E+E M + G P +F I A + N AL+ L N+M
Sbjct: 405 YNVLINGLFKLGKY-ESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALK-LLNEM 462
Query: 247 ALFG 250
+G
Sbjct: 463 KSYG 466
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 103/214 (48%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
++P++++Y LID YCK + +E A + ++M + + PDV++YT I+ GL G+ ++A+
Sbjct: 83 LEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAK 142
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
V +EM+E G P+ +Y I + + +A L MV +G+ + Y
Sbjct: 143 SVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGL 202
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ + ++ +++ ++ +PN + L+ + V L +M EK +
Sbjct: 203 FKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNV 262
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
+V + D G L EA +M+++ P+
Sbjct: 263 IVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPN 296
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 97/210 (46%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ D+V Y L+D K A + + + +E + P+ ++Y+++I G +G +K
Sbjct: 187 GIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKG 246
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+L+EM+E +P+ Y++ + Y L +A +M +MV++ + PN Y
Sbjct: 247 ELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDG 306
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
++ ++ + +L+ M G N V KR ++E A +L+ DM+ +G
Sbjct: 307 YFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPD 366
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEK 214
+ + D GK +A EM EK
Sbjct: 367 RVNYTSMMDGFFKAGKESDAFNIAQEMTEK 396
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 90/219 (41%), Gaps = 39/219 (17%)
Query: 1 MREM---GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGL 57
MR+M + P++ Y LID Y K Q A + ++M+ + + S + L
Sbjct: 285 MRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKR 344
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEK-------- 109
G+ ++A ++ K+M G PD Y + + + A + DA + EM EK
Sbjct: 345 SGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVA 404
Query: 110 --------------------------GLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMG 143
GL+P++ T+N + +L ++ L M
Sbjct: 405 YNVLINGLFKLGKYESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKS 464
Query: 144 TGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEKGF 181
G PN+ +C LV +LC E +E + L NDM+ GF
Sbjct: 465 YGLKPNSITCNILVQRLCAAGE-IEKTMDLLNDMLVMGF 502
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 86/212 (40%), Gaps = 37/212 (17%)
Query: 40 DISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDA 99
+I V + +I G G+ +A ++L+ MK G PD YN + +C L A
Sbjct: 12 EIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTA 71
Query: 100 SGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKL 159
LM E+ L PN TY + YC+ + CL
Sbjct: 72 KKLMGEISLVNLEPNVITYTTLI-------------DAYCK---SQCL------------ 103
Query: 160 CKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
E AL ++++M K ++ + + LC GK+ EA+ F EM E G P+
Sbjct: 104 -------EDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPN 156
Query: 220 QVSFRR-IKALMELANKQEALQNLSNKMALFG 250
+ S+ I +L + N EA L +M + G
Sbjct: 157 RFSYATLIDSLFKEGNVAEAFV-LQGRMVVRG 187
>gi|297734659|emb|CBI16710.3| unnamed protein product [Vitis vinifera]
Length = 569
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 130/261 (49%), Gaps = 4/261 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
++EMG P+ + YN L++ Y K R++++A + E+MR + I+PD I++ ++ G G+
Sbjct: 152 LKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGR 211
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ +LK++ G PD + ++ ++ C A RL +A + +M+EKGLSP+ +N
Sbjct: 212 EEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNS 271
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + ++ Y M+ G P+ +C L+ +++ A +L M+EKG
Sbjct: 272 VIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKG 331
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ VL D G +V A+ + EM +G P V+F A ++ +KQ ++
Sbjct: 332 LSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAF---SAFIDGLSKQGLVE 388
Query: 241 NLSNK-MALFGPSMIPKREEY 260
N + + +IP Y
Sbjct: 389 EAYNVFLEMLRKGLIPNNFAY 409
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 90/184 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ PD+V+++ ID K VE+AY + +M + + P+ +Y S+I G G+
Sbjct: 362 MERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGK 421
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A + K M+ G PD N I C R+R A + +M + GLSP+ TYN
Sbjct: 422 LNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNT 481
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + D+ ++ NL RM +G P+ + + ++ A+ + +++V G
Sbjct: 482 LINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAG 541
Query: 181 FGSY 184
S+
Sbjct: 542 ILSF 545
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 77/153 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ P+ +YN LI +CK ++ +A K+ + MR + PD+ + IIGGL G+
Sbjct: 397 MLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGR 456
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +V +M + G PD YN I YC A + +A L++ M G +P+ TTYN+
Sbjct: 457 MRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNI 516
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSC 153
F S + + + ++ G L + +C
Sbjct: 517 RIHGFCSSRRMNRAVLMLDELVSAGILSFSFAC 549
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 115/290 (39%), Gaps = 35/290 (12%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MRE+GV+P L + + +K+ + + P +++ II G G
Sbjct: 12 MREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGIILGFCRKGC 71
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+L M ++ C P+A AYN I CI R DA + M+E+G +P T+N
Sbjct: 72 IHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFNT 131
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F ++ + L+ + G PN L+ + +++ A L+ +M +KG
Sbjct: 132 VINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKG 191
Query: 181 F------------GSY-------------------ILVSDVLFDL----LCDMGKLVEAE 205
G Y +L LFD+ LC G+L EA
Sbjct: 192 IAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAM 251
Query: 206 KSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFGPSMIP 255
+ ++M+EKG PS ++F + A A ++ M FG + P
Sbjct: 252 EFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSP 301
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 2/216 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+ + +++ L+D + K V A + +M I PDV+++++ I GL G
Sbjct: 327 MIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGL 386
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A +V EM G P+ AYN+ I +C +L +A L M +GL P+ T N+
Sbjct: 387 VEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNM 446
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+RS+ N++ M TG P+ + L+ CK + V A L N M
Sbjct: 447 IIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVN-ADNLVNRMYAS 505
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
G + ++ C ++ A E++ G
Sbjct: 506 GSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAG 541
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 106/259 (40%), Gaps = 37/259 (14%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+ P I+++N +I Y + +KA++ + M ++P + +S++ GL + G+
Sbjct: 257 MLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGR 316
Query: 61 PDKARDVLK-----------------------------------EMKEYGCYPDAAAYNA 85
+A +++ EM+ G +PD A++A
Sbjct: 317 LQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSA 376
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
I + +A + EM+ KGL PN YN F L + L M G
Sbjct: 377 FIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRG 436
Query: 146 CLPNT-QSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEA 204
LP+ + M + LCK Q ++ A+ ++ DM + G I+ + L + C +V A
Sbjct: 437 LLPDIFTTNMIIGGLCK-QGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNA 495
Query: 205 EKSFLEMIEKGHKPSQVSF 223
+ M G P ++
Sbjct: 496 DNLVNRMYASGSNPDLTTY 514
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/234 (20%), Positives = 95/234 (40%), Gaps = 4/234 (1%)
Query: 28 KAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAI 87
+A +I+ +MR+ + P + L VG + K++ G P ++ I
Sbjct: 4 QALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGII 63
Query: 88 RNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCL 147
+C + L+ M + PNA YN+ + + M+ GC
Sbjct: 64 LGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCN 123
Query: 148 PNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEK 206
P + ++ CK VE A +L++ + E GF ++ + L + M ++ +A
Sbjct: 124 PTVVTFNTVINAFCKEGNVVE-ARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANM 182
Query: 207 SFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFGPSMIPKREEY 260
+ EM +KG P ++F + + ++E L +++ G ++P R +
Sbjct: 183 LYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLG--LLPDRSLF 234
>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Vitis vinifera]
Length = 778
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 110/220 (50%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
R+ G D VSY LI Y KD V++A K+ ++M++++I P ++Y IIGGL G+
Sbjct: 480 RKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKT 539
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
++A L E+ E G PD YN + YC + A ++MVE P+ T N+
Sbjct: 540 EQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNIL 599
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
R L + L+ + G +T + L+ ++ +++ A L ++M EK
Sbjct: 600 LRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKEL 659
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQV 221
G + + L D G++ EAE+ +M+EKG+ P QV
Sbjct: 660 GPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQV 699
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 119/247 (48%), Gaps = 4/247 (1%)
Query: 1 MREMG---VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGL 57
M EMG +K D V+ N ++ C+++++E+AYK++ R D +SY ++I G
Sbjct: 441 MDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFK 500
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
G D+A + EMKE P YN I C + A ++E++E GL P+ TT
Sbjct: 501 DGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETT 560
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
YN + D+ ++ + +M+ P+ +C L++ + +E AL+L+N V
Sbjct: 561 YNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWV 620
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQ 236
KG + + L LC G+L +A EM EK P ++ I AL + +
Sbjct: 621 SKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIR 680
Query: 237 EALQNLS 243
EA + +S
Sbjct: 681 EAEEFMS 687
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 115/241 (47%), Gaps = 1/241 (0%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
++G+ P++ ++N +I YC + + + A + + M + SPD ++Y +I+ L G+
Sbjct: 201 KLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLG 260
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
ARD+L +MK G P+ YN + YC L++A+ +++ M + L P+ TYN+
Sbjct: 261 DARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLI 320
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
+ ++ L M LP+ S L+ C K+ A +L +M EKG
Sbjct: 321 NGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVK 380
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQN 241
+ +++ C GK+ +A + +M E G P V++ I + N EA +
Sbjct: 381 PNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRT 440
Query: 242 L 242
+
Sbjct: 441 M 441
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 107/261 (40%), Gaps = 35/261 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E GVKP+ V++N ++ YCK+ +++ A + KM + SPD ++Y ++I G G
Sbjct: 374 MSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGN 433
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLM----------------- 103
+A + EM D+ N +R C K+L +A L+
Sbjct: 434 MGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGT 493
Query: 104 ------------------DEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
DEM EK + P+ TYN + + ++ +G
Sbjct: 494 LIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESG 553
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
LP+ + ++ R+ VE A Q N MVE F + ++L LC G L +A
Sbjct: 554 LLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKAL 613
Query: 206 KSFLEMIEKGHKPSQVSFRRI 226
K F + KG V++ +
Sbjct: 614 KLFNTWVSKGKAIDTVTYNTL 634
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 109/224 (48%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G+ P+ +YN L+ YCK +++A ++E M ++ PDV +Y +I GL G+
Sbjct: 269 MKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGR 328
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A + EM+ PD +YN I ++ +A L++EM EKG+ PNA T+N+
Sbjct: 329 IEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNI 388
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+ + + + N +M +G P+ + L+ CK E A + ++M K
Sbjct: 389 MVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGE-AFRTMDEMGRK 447
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + + LC KL EA K ++G+ +VS+
Sbjct: 448 NMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSY 491
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 100/227 (44%), Gaps = 2/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + PD V+YN ++D CK ++ A ++ M+ + P+ +Y ++ G +G
Sbjct: 234 MGKYNCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGW 293
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A +V++ M + PD YN I C R+ +A L DEM L P+ +YN
Sbjct: 294 LKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNT 353
Query: 121 FFR-VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
WS + ++ L M G PN + +VK ++ K++ A M E
Sbjct: 354 LINGCLEWSK-ISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEES 412
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
GF + + L + C G + EA ++ EM K K V+ I
Sbjct: 413 GFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTI 459
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 97/250 (38%), Gaps = 47/250 (18%)
Query: 1 MREMGVKPDIVSYNCLI-----------------------------------DVYCKDRQ 25
M+E + P V+YNC+I YC++
Sbjct: 514 MKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGD 573
Query: 26 VEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNA 85
VEKA++ KM + PDV + ++ GL + G +KA + G D YN
Sbjct: 574 VEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNT 633
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
I + C RL DA L+ EM EK L P+ TYN S +R + +M+ G
Sbjct: 634 LITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKG 693
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
LP+ +++L K + V +D + +I LC GK +A
Sbjct: 694 NLPDQ-----VLQLDKNETVVTSETSEESDSSSVAYSEWI-------KELCTEGKYKDAM 741
Query: 206 KSFLEMIEKG 215
+ F E +KG
Sbjct: 742 RIFGESKQKG 751
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 98/230 (42%), Gaps = 8/230 (3%)
Query: 17 IDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK-----ARDVLKEM 71
I Y + Q A++I +KM+ + P++++ +++ L V P +R+ +
Sbjct: 142 IGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSL--VRYPSSHSVSFSREAFNDA 199
Query: 72 KEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDL 131
+ G P+ +N I YC+ + +DA ++ M + SP+ TYN L
Sbjct: 200 IKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRL 259
Query: 132 RSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVL 191
+ +L M G LPN + LV + ++ A + M + + ++L
Sbjct: 260 GDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNML 319
Query: 192 FDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQ 240
+ LC+ G++ EA K EM P VS+ I +E + EA +
Sbjct: 320 INGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFK 369
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 66/137 (48%), Gaps = 23/137 (16%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G D V+YN LI CK+ +++ A+ ++ +M ++++ PD +Y +II L G+ +A
Sbjct: 623 GKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREA 682
Query: 65 RDVLKEMKEYGCYPD-----------------------AAAYNAAIRNYCIAKRLRDASG 101
+ + +M E G PD + AY+ I+ C + +DA
Sbjct: 683 EEFMSKMLEKGNLPDQVLQLDKNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMR 742
Query: 102 LMDEMVEKGLSPNATTY 118
+ E +KG++ + +TY
Sbjct: 743 IFGESKQKGITVDKSTY 759
>gi|242089061|ref|XP_002440363.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
gi|241945648|gb|EES18793.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
Length = 715
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 110/215 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G P++V+Y +ID+ CK +VE A +M E +SPD+I++TS+I GL +G+
Sbjct: 321 MRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGE 380
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
K + EM G +P+A N + + C R+ +A D+++ G+ P+ +Y +
Sbjct: 381 WKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTI 440
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + S L RM+ G P+ + L+ + +V+ AL L+ +M K
Sbjct: 441 LIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKD 500
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
+ +++ L G++V A + ++++++ G
Sbjct: 501 VKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSG 535
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 111/232 (47%), Gaps = 16/232 (6%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLV--------- 58
P+++SYN +I+ K+ +V+KAY + +M + P++++Y S+I GL
Sbjct: 137 PNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAV 196
Query: 59 -------GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGL 111
GQ ++A +LK+M G PD Y+ I YC R +A + D MV +G
Sbjct: 197 LQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQ 256
Query: 112 SPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQ 171
+P+A TY + L +L M+ G L++ + E ++ A+
Sbjct: 257 NPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMT 316
Query: 172 LWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ +M +KGF ++ + D+LC G++ +A F +M+ +G P ++F
Sbjct: 317 AFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITF 368
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 110/242 (45%), Gaps = 16/242 (6%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDR----------------QVEKAYKIVEKMRDEDISPD 44
M G P+IV+YN +ID CK + Q+E+A ++++KM + PD
Sbjct: 165 MLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAVLQQMFDKGQLEEAVRLLKKMSGGGLQPD 224
Query: 45 VISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMD 104
V++Y+ +I +G+ +AR++ M G PDA Y + Y L D L+
Sbjct: 225 VVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYRTLLHGYATKGALVDMHDLLA 284
Query: 105 EMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQE 164
M++ G+ +N+ R + + L + + M G PN + ++ + +
Sbjct: 285 LMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAG 344
Query: 165 KVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
+VE A+ ++ MV +G I+ L LC +G+ + EK EMI +G P+ +
Sbjct: 345 RVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLN 404
Query: 225 RI 226
I
Sbjct: 405 TI 406
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 126/280 (45%), Gaps = 41/280 (14%)
Query: 5 GVKPDIVSY-----------------------------------NCLIDVYCKDRQVEKA 29
G+ PDI+++ N ++D CK+ +V +A
Sbjct: 360 GLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEA 419
Query: 30 YKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRN 89
+ +++ + PDV+SYT +I G L G+ D++ +L M G PD Y+A +
Sbjct: 420 HDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNG 479
Query: 90 YCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGC-LP 148
YC R+ DA L EM K + PNA TYN+ + + + ++ Y +++ +G L
Sbjct: 480 YCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLG 539
Query: 149 NTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSF 208
+ L LC+ V+ AL+++ + K F + +++ L +G++ +A+ F
Sbjct: 540 INTYNIVLGGLCE-NSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLF 598
Query: 209 LEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMAL 248
++ G P + I LM ++ +E L S+++ L
Sbjct: 599 SAILPSGLVPDAI----IYGLMIQSHIEEGLLEESDELFL 634
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 95/214 (44%)
Query: 13 YNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMK 72
+N LI Y K+ ++KA +MR + SP+V++YT++I L G+ + A +M
Sbjct: 298 FNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMV 357
Query: 73 EYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLR 132
G PD + + I C + L EM+ +G+ PNA N +
Sbjct: 358 SEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVL 417
Query: 133 SSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLF 192
+ + + +++ G P+ S L+ K++ +++L MV G + L
Sbjct: 418 EAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALL 477
Query: 193 DLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ C G++ +A + EM K KP+ +++ I
Sbjct: 478 NGYCKNGRVDDALALYREMFSKDVKPNAITYNII 511
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 65/118 (55%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
+GVKPD+VSY LID YC D +++++ K++ +M + PD ++Y++++ G G+ D
Sbjct: 428 HVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVD 487
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A + +EM P+A YN + A R+ A ++V+ G+ TYN+
Sbjct: 488 DALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNI 545
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 79/193 (40%), Gaps = 35/193 (18%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G++PD V+Y+ L++ YCK+ +V+ A + +M +D+ P+ I+Y I+ GL G+
Sbjct: 461 MVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGR 520
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYC----------------------------- 91
AR+ ++ + G YN + C
Sbjct: 521 VVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNI 580
Query: 92 ------IAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
R+ DA L ++ GL P+A Y L + L S L+ M G
Sbjct: 581 MIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGLMIQSHIEEGLLEESDELFLSMEKNG 640
Query: 146 CLPNTQSCMFLVK 158
C N+++ +V+
Sbjct: 641 CTANSRTLNAIVR 653
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 70/182 (38%), Gaps = 22/182 (12%)
Query: 74 YGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRS 133
Y C P+ +YN I + A L EM+ +G PN TYN S
Sbjct: 133 YNCPPNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYN-------------S 179
Query: 134 SWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFD 193
+ C+ MF + ++E A++L M G ++ +L D
Sbjct: 180 VIDGLCKAQAMDKAEAVLQQMF------DKGQLEEAVRLLKKMSGGGLQPDVVTYSLLID 233
Query: 194 LLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFGPSM 253
C +G+ EA F M+ +G P ++R L+ + AL ++ + +AL
Sbjct: 234 YYCKIGRCTEARNIFDSMVRRGQNPDAYTYR---TLLHGYATKGALVDMHDLLALMIQDG 290
Query: 254 IP 255
IP
Sbjct: 291 IP 292
>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Vitis vinifera]
Length = 582
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 117/251 (46%), Gaps = 2/251 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G PDIV+YN +I C R++ A K+++++ ++ P VI+YT +I + G
Sbjct: 163 MKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGG 222
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A +L+EM G PD YNA IR C + A+ L+ + KG P+ +YN+
Sbjct: 223 INEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNI 282
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
R F L M GC PN + L+ R +++ A+ + M+EK
Sbjct: 283 LLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKE 342
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI-KALMELANKQEAL 239
D L LC G+L A MI G P V++ I AL + N +AL
Sbjct: 343 LTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQAL 402
Query: 240 QNLSNKMALFG 250
+ + NK+ G
Sbjct: 403 E-IFNKLRGMG 412
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 114/255 (44%), Gaps = 37/255 (14%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G KPD++SYN L+ + + ++ K+V +M P+ ++Y+ +I L G+ D+A
Sbjct: 272 GCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEA 331
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
VLK M E PD +Y+ I C RL A G+MD M+ G P+ YN
Sbjct: 332 ISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAA 391
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-------------------------- 158
+ + + ++ ++ G GC PN S ++
Sbjct: 392 LCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPD 451
Query: 159 ----------LCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSF 208
LC R VE A+ L +DM + GF ++ +++ LC + ++ +A F
Sbjct: 452 EITYNSLISCLC-RDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMF 510
Query: 209 LEMIEKGHKPSQVSF 223
EMIEKG +P++ ++
Sbjct: 511 AEMIEKGCRPNETTY 525
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 110/239 (46%), Gaps = 2/239 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PD++ LI + + +EKA +++E + + PDV +Y ++I G V + + A
Sbjct: 98 GYTPDVILCTKLIKGFFNFKNIEKASRVMEIL-ESHTEPDVFAYNAVISGFCKVNRIEAA 156
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
VL MK G PD YN I + C ++L A ++D+++ P TY +
Sbjct: 157 TQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEA 216
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + L M+ G LP+ + +++ ++ VE A +L + KG
Sbjct: 217 TIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPD 276
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEALQNL 242
++ ++L + GK E EK EM +G +P++V++ I +L EA+ L
Sbjct: 277 VISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVL 335
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 104/227 (45%), Gaps = 2/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ PD+ +YN +I CK+ VE+A +++ + + PDVISY ++ G+
Sbjct: 233 MLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGK 292
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+ ++ EM GC P+ Y+ I + C R+ +A ++ M+EK L+P+ +Y+
Sbjct: 293 WDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDP 352
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPN-TQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
L + + M+ GCLP+ L LCK + AL+++N +
Sbjct: 353 LISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQ-ALEIFNKLRGM 411
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G + + + L G A MI KG P ++++ +
Sbjct: 412 GCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSL 458
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 67/124 (54%), Gaps = 4/124 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVY--CKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLV 58
+R MG P++ SYN +I C DR +A +V M + + PD I+Y S+I L
Sbjct: 408 LRGMGCPPNVSSYNTMISALWSCGDRS--RALGMVPAMISKGVDPDEITYNSLISCLCRD 465
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
G ++A +L +M++ G P +YN + C +R+ DA G+ EM+EKG PN TTY
Sbjct: 466 GLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTY 525
Query: 119 NLFF 122
L
Sbjct: 526 ILLI 529
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 96/208 (46%), Gaps = 1/208 (0%)
Query: 16 LIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYG 75
L++ CK + ++ +E + ++ +PDVI T +I G +KA V+ E+ E
Sbjct: 74 LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVM-EILESH 132
Query: 76 CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSW 135
PD AYNA I +C R+ A+ +++ M +G P+ TYN+ L +
Sbjct: 133 TEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLAL 192
Query: 136 NLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLL 195
+ +++ C+P + L++ + + A++L +M+ +G + + + +
Sbjct: 193 KVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGM 252
Query: 196 CDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
C G + A + + KG KP +S+
Sbjct: 253 CKEGMVERAAELITSLTSKGCKPDVISY 280
>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
Length = 702
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 120/249 (48%), Gaps = 35/249 (14%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G +PD++SY+ +ID CK ++V+KAY+ ++MR +P+V++Y+S+I GL V +P +
Sbjct: 215 GCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSEC 274
Query: 65 RDVLKEMKEYG------------------------CY-----------PDAAAYNAAIRN 89
++L MKE G C P+ YN A+
Sbjct: 275 LELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHG 334
Query: 90 YCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPN 149
C A R+ +A ++ EMVE ++P+ TY+ F + + + +++ RMM C+P+
Sbjct: 335 LCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPH 394
Query: 150 TQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFL 209
+ M L+ +K A ++ DMV GF + +VL D +C + A + +
Sbjct: 395 PVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYH 454
Query: 210 EMIEKGHKP 218
+M K +P
Sbjct: 455 KMKRKKRQP 463
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 117/238 (49%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G KP++V+YN + CK +V++AY+I+ +M + ++PDVI+Y+SII G G+ DKA
Sbjct: 320 GKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKA 379
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
DV M + C P + + + K+ R+A + ++MV G P TYN+
Sbjct: 380 DDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDC 439
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
++ + S+ +Y +M P+ + L++ R +V+ A + + M
Sbjct: 440 VCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPN 499
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNL 242
+ L ++LC G++ EA ++E G +P +F+ + + L K EA L
Sbjct: 500 GAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLRKKWEAASKL 557
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 115/222 (51%), Gaps = 8/222 (3%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P+ + Y +I+ +CK QV++A++++++M++ + DV+ ++++I GL G+ D+A +
Sbjct: 109 PNEIMYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQ 168
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEK-----GLSPNATTYNLFF 122
K M E C P+ YN + C A R+ +A L D+M ++ G P+ +Y+
Sbjct: 169 FKSMGEE-CSPNVITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVI 227
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGF 181
+ + ++ + RM GC PN + L+ LCK E L+L M EKGF
Sbjct: 228 DALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSE-CLELLLHMKEKGF 286
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G I+ + + L + +A + F +++ G KP+ V++
Sbjct: 287 GINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTY 328
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 104/221 (47%), Gaps = 5/221 (2%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMR-----DEDISPDVISYTSIIGGLGLVGQPD 62
P++++YN +++ CK ++++A ++ + M PDVISY+++I L + D
Sbjct: 178 PNVITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVD 237
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
KA + K M+ GC P+ Y++ I C R + L+ M EKG N +N
Sbjct: 238 KAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAML 297
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
+ +++ + + R++ +G PN + V + +V+ A ++ +MVE
Sbjct: 298 HALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVT 357
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + D C G++ +A+ F M+ P V+F
Sbjct: 358 PDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTF 398
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 101/228 (44%), Gaps = 13/228 (5%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P + +YN L+D C VE A +I KM+ + PD +Y +I L +
Sbjct: 421 MVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARR 480
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A++ L M+ P+ A +A + C + +A ++D +VE G P T+ +
Sbjct: 481 VDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKI 540
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGT-GCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
Y LR W +++ + G + + + V + K + A+++ MV K
Sbjct: 541 LVEELY----LRKKWEAASKLLRSPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLK 596
Query: 180 GF----GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G G+Y+ V LC + ++ A F +M +G P V++
Sbjct: 597 GVRPDEGTYVAV----LRSLCGLDRVESAIAEFEKMASRGCAPGLVTY 640
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 83/180 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E V PD+++Y+ +ID +CK +++KA + +M + P +++ +++ G +
Sbjct: 351 MVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKK 410
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A V ++M G P YN + C A + A + +M K P+ TY
Sbjct: 411 SREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAP 470
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + + M +PN C LV++ +Q +V+ A + +++VE G
Sbjct: 471 LIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVG 530
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 94/231 (40%), Gaps = 32/231 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ +PD +Y LI C+ R+V++A + ++ M +++ P+ +++ L G+
Sbjct: 456 MKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGE 515
Query: 61 PDKARDVLKEMKEYGCYP--------------------------------DAAAYNAAIR 88
D+A VL + E GC P DAA Y+ +
Sbjct: 516 VDEACSVLDNVVEVGCQPLGETFKILVEELYLRKKWEAASKLLRSPGFVADAATYSLCVA 575
Query: 89 NYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLP 148
C A + +A ++++MV KG+ P+ TY R + + S+ + +M GC P
Sbjct: 576 EICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASRGCAP 635
Query: 149 NTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMG 199
+ L+ + + A +++ MV GF L L D G
Sbjct: 636 GLVTYTLLIGEACSADMADEAFRIFEAMVAAGFTPQAQTMRTLSSCLRDAG 686
>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
Length = 636
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 119/245 (48%), Gaps = 6/245 (2%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ P + +YN +I CK+ + A + E+M+ ++PD+++Y ++I G G +G D++
Sbjct: 127 GIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLLDES 186
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ +EMK GC PD YNA I ++C K + A EM +K L PN +Y+
Sbjct: 187 VCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLIDA 246
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
++ + + M G LPN + L+ + + A L ++M+++
Sbjct: 247 LCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLN 306
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSN 244
I+ L D LC+ G + EAE+ F M + G P+ ++A L + ++++
Sbjct: 307 IVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPN------LQAYTALIHGHIKVRSMDK 360
Query: 245 KMALF 249
M LF
Sbjct: 361 AMELF 365
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 124/251 (49%), Gaps = 2/251 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ MG +PD+++YN LI+ +CK + + +A++ +M+D+D+ P+VISY+++I L G
Sbjct: 193 MKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGM 252
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +M G P+ Y++ I C A L +A L DEM+++ + N TY
Sbjct: 253 MQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTT 312
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + L+ M G PN Q+ L+ + ++ A++L+N+M EK
Sbjct: 313 LLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKD 372
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI-KALMELANKQEAL 239
IL+ + LC KL E + EM E G + V + + A + N+ EA+
Sbjct: 373 IKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAI 432
Query: 240 QNLSNKMALFG 250
NL +M G
Sbjct: 433 -NLLEEMRDLG 442
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 117/252 (46%), Gaps = 4/252 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + V +IV+Y L+D C++ + +A ++ M ++P++ +YT++I G V
Sbjct: 298 MLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRS 357
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA ++ EM+E PD + + C +L + +M EM E G+ N Y
Sbjct: 358 MDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTT 417
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGC-LPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
++ + + + NL M G + C + LCKR V+ A+ + M +
Sbjct: 418 LMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRG-LVQEAIYYFGRMPDH 476
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEA 238
+ V L D LC + +A+K F EM +K P ++++ I ++ N QEA
Sbjct: 477 DLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEA 536
Query: 239 LQNLSNKMALFG 250
L N+ NKM G
Sbjct: 537 L-NMRNKMMEMG 547
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 87/181 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR++G + +V++ LID CK V++A +M D D+ P+V YT++I GL
Sbjct: 438 MRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNC 497
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A+ + EM++ PD AY A I ++A + ++M+E G+ + Y
Sbjct: 498 IGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAYTS 557
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++ + M+G G +P+ C L++ ++ A++L N++VEKG
Sbjct: 558 LVWGLSQCGQVQQARKFLAEMIGKGIIPDETLCTRLLRKHYELGNIDEAIELQNELVEKG 617
Query: 181 F 181
Sbjct: 618 L 618
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 94/220 (42%), Gaps = 2/220 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P ++ L V + +E A + +M + P S + + L G+ D +RD
Sbjct: 60 PGFGVFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSRDF 119
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
++M G P YN I + C + A L ++M + GL+P+ TYN +
Sbjct: 120 FRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGK 179
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYIL 186
L S L+ M GC P+ + L+ CK + + A + + +M +K ++
Sbjct: 180 IGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLR-AFEFFREMKDKDLKPNVI 238
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
L D LC G + A K F++M G P++ ++ +
Sbjct: 239 SYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSL 278
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 78/160 (48%), Gaps = 8/160 (5%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + ++P++ Y LID CK+ + A K+ ++M+D+++ PD I+YT++I G G
Sbjct: 473 MPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGN 532
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++ +M E G D AY + + +++ A + EM+ KG+ P+ T
Sbjct: 533 FQEALNMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPDETLCTR 592
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTG--------CLPNTQS 152
R Y ++ + L ++ G +PN Q+
Sbjct: 593 LLRKHYELGNIDEAIELQNELVEKGLIHGNSNPAVPNIQT 632
>gi|147841407|emb|CAN66681.1| hypothetical protein VITISV_005087 [Vitis vinifera]
Length = 882
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 124/258 (48%), Gaps = 18/258 (6%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
MGVK D+ +YN LI +C+ + +A + + M + I D+I+Y ++I G + K
Sbjct: 535 MGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKK 594
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
A V +M G P+ YN + A+ +++A+GL+++M E+GL PNATTY++
Sbjct: 595 AFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVS 654
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
+++ LYC M+ G +P T++ L+ + +K+ A +L +M +G
Sbjct: 655 GHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPP 714
Query: 184 YILVSDVLFDLLCDMGKL---------------VEAEKSFLEMIEKGHKPSQVSFRRIKA 228
D+ L+C KL EA++ F EM EKG P + + I
Sbjct: 715 NSSTYDI---LICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISF 771
Query: 229 LMELANKQEALQNLSNKM 246
+ K+ Q + NK+
Sbjct: 772 TLAKPGKKADAQRILNKL 789
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 106/218 (48%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
++ + +N LID YC++ ++ +A +++E M+ E +PD+++Y +++ G +G A+
Sbjct: 13 IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
++ E+ P+ Y I YC ++ L DA + DEM K L P+ TY
Sbjct: 73 KLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGL 132
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
S + + +++ M G +PN S L+ ++ V A L MV +G G +
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDV 192
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+V L D L G AE F ++E+ P+ V++
Sbjct: 193 VVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTY 230
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 122/285 (42%), Gaps = 35/285 (12%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR++G+ PD ++N +I+ YCK+ + A K++ +M+ + P+ I+ ++ L G+
Sbjct: 427 MRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGE 486
Query: 61 PDKARDVLKEMKEYGCYP-----------------------------------DAAAYNA 85
+K D+L +M G +P D + YN
Sbjct: 487 IEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNT 546
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
I +C +R A+ + +M+ KG+ + TYN + S+ L+ ++ ++ +M+ G
Sbjct: 547 LISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEG 606
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
PN ++ L+ ++ A L N M E+G D+L +G + E
Sbjct: 607 VSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECV 666
Query: 206 KSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFG 250
K + EMI KG P ++ + + K + L +M + G
Sbjct: 667 KLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRG 711
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 116/247 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E+GV P+ SY LID K+ V +A+ + +M I DV+ YT+++ GL G
Sbjct: 148 MEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGM 207
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A D+ + + E P+ Y+A I +C + L+ EM EK + PN Y+
Sbjct: 208 ANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSS 267
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L + ++ +M+ LPN L+ + ++ IAL L+ +M +G
Sbjct: 268 IVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRG 327
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
V D + L G++ EA++ F +M+ +G P +V++ + A K+
Sbjct: 328 LEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAF 387
Query: 241 NLSNKMA 247
N++ +M
Sbjct: 388 NIAQEMT 394
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 117/249 (46%), Gaps = 3/249 (1%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E + P+ V+Y+ LID +CK V K ++++M ++ I P+VI Y+SI+ G G +
Sbjct: 220 EESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLN 279
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
+A DV+++M + P+ Y I Y A + A L EM +GL N + F
Sbjct: 280 EAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFV 339
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
S + + L+ MM G LP+ + ++ + K A + +M EK G
Sbjct: 340 NNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSG 399
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQN 241
++ +VL + L +GK E+E M + G P +F I A + N AL+
Sbjct: 400 FDVVAYNVLINGLFKLGKY-ESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALK- 457
Query: 242 LSNKMALFG 250
L N+M +G
Sbjct: 458 LLNEMKSYG 466
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 103/223 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M MG P ++ ++D K R+ + +++ + D+ +Y ++I +G
Sbjct: 497 MLVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNTLISTFCRLGM 556
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A V K+M G D YNA I YCI+ L+ A + +M+ +G+SPN TYN+
Sbjct: 557 IRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNI 616
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ + L +M G +PN + LV + ++ ++L+ +M+ KG
Sbjct: 617 LLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKG 676
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
F +VL K+ +A++ EM +G P+ ++
Sbjct: 677 FVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTY 719
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 102/215 (47%), Gaps = 1/215 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ PD V+Y ++D + K + A+ I ++M ++ DV++Y +I GL +G+
Sbjct: 358 MMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGK 417
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ + M++ G PD+A +N I YC L +A L++EM GL PN+ T N+
Sbjct: 418 YE-SESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNI 476
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + ++ + +L M+ G P + ++ + + ++ L + +V G
Sbjct: 477 LVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMG 536
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
+ + L C +G + A F +M+ KG
Sbjct: 537 VKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKG 571
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 103/214 (48%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
++P++++Y LID YCK + +E A + ++M + + PDV++YT I+ GL G+ ++A+
Sbjct: 83 LEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAK 142
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
V +EM+E G P+ +Y I + + +A L MV +G+ + Y
Sbjct: 143 SVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGL 202
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ + ++ +++ ++ +PN + L+ + V L +M EK +
Sbjct: 203 FKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNV 262
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
+V + D G L EA +M+++ P+
Sbjct: 263 IVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPN 296
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 97/210 (46%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ D+V Y L+D K A + + + +E + P+ ++Y+++I G +G +K
Sbjct: 187 GIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKG 246
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+L+EM+E +P+ Y++ + Y L +A +M +MV++ + PN Y
Sbjct: 247 ELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDG 306
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
++ ++ + +L+ M G N V KR ++E A +L+ DM+ +G
Sbjct: 307 YFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPD 366
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEK 214
+ + D GK +A EM EK
Sbjct: 367 RVNYTSMMDGFFKAGKESDAFNIAQEMTEK 396
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 99/226 (43%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G PDIV+YN L++ +CK + A K++ ++ ++ P+VI+YT++I
Sbjct: 43 MKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQC 102
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A + EM PD Y + C + ++ +A + EM E G+ PN +Y
Sbjct: 103 LEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYAT 162
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ ++ L RM+ G + L+ + A ++ ++E+
Sbjct: 163 LIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEES 222
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ L D C +G + + E EM EK P+ + + I
Sbjct: 223 LVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSI 268
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 88/216 (40%), Gaps = 36/216 (16%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + + P++ Y LID Y K Q A + ++M+ + + S + L G+
Sbjct: 288 MVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGR 347
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEK----------- 109
++A ++ K+M G PD Y + + + A + DA + EM EK
Sbjct: 348 MEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNV 407
Query: 110 -----------------------GLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGC 146
GL+P++ T+N + +L ++ L M G
Sbjct: 408 LINGLFKLGKYESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGL 467
Query: 147 LPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEKGF 181
PN+ +C LV +LC E +E + L NDM+ GF
Sbjct: 468 KPNSITCNILVQRLCAAGE-IEKTMDLLNDMLVMGF 502
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 86/212 (40%), Gaps = 37/212 (17%)
Query: 40 DISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDA 99
+I V + +I G G+ +A ++L+ MK G PD YN + +C L A
Sbjct: 12 EIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTA 71
Query: 100 SGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKL 159
LM E+ L PN TY + YC+ + CL
Sbjct: 72 KKLMGEISLVNLEPNVITYTTLI-------------DAYCK---SQCL------------ 103
Query: 160 CKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
E AL ++++M K ++ + + LC GK+ EA+ F EM E G P+
Sbjct: 104 -------EDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPN 156
Query: 220 QVSFRR-IKALMELANKQEALQNLSNKMALFG 250
+ S+ I +L + N EA L +M + G
Sbjct: 157 RFSYATLIDSLFKEGNVAEAFV-LQGRMVVRG 187
>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
Length = 448
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 108/219 (49%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P +++Y L+D CK ++ A I+E M + +P+V++Y ++I G +G D+A +
Sbjct: 100 PSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVL 159
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
+M E C PD YN I YC +R +D + L+ EMV+ G PN TYN
Sbjct: 160 FNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVK 219
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
S ++NL M+ C P+ + ++ + + ++++A +L+ M ++G I
Sbjct: 220 SGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYT 279
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+++ C ++ +A + M E G P V++ I
Sbjct: 280 YNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSI 318
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 110/216 (50%), Gaps = 1/216 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD ++Y+ LI+ +CK R ++AY+++++M I P Y +II GL G+ D A
Sbjct: 31 PDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVH 90
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
++M+ + C P Y + C + R+ DAS ++++M+E G +PN TYN F
Sbjct: 91 YRDMQRH-CAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCK 149
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
++ + L+ +M+ C P+ + L+ +QE+ + +L +MV+ G +
Sbjct: 150 LGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFIT 209
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ L D L GK ++A M+ + KPS +F
Sbjct: 210 YNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTF 245
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 93/181 (51%), Gaps = 2/181 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G PDI +YN +I C+ +++ A +++E+M + PDV++Y SI+ GL Q
Sbjct: 268 MTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQ 327
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A +V + ++ G + D + I C ++RL DA L+ EM G +P+ Y +
Sbjct: 328 VDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTI 387
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEK 179
F ++ L S + M+ GC+P + ++ KLCK +V L M+E+
Sbjct: 388 LIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCK-SARVRDGCMLLKTMLER 446
Query: 180 G 180
G
Sbjct: 447 G 447
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 110/258 (42%), Gaps = 35/258 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G P++V+YN LI+ +CK +++A + +M + SPDV +Y +I G +
Sbjct: 128 MIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQER 187
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
P +L+EM +YGC P+ YN + + + + DA L M+ + P+ T+NL
Sbjct: 188 PQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNL 247
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+F L ++ L+ M GCLP+ + ++ R +++ A QL M E G
Sbjct: 248 MIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAG 307
Query: 181 F--------------------------------GSYIL---VSDVLFDLLCDMGKLVEAE 205
G Y L L D LC +L +AE
Sbjct: 308 CPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAE 367
Query: 206 KSFLEMIEKGHKPSQVSF 223
K EM G P V++
Sbjct: 368 KLLREMERNGSAPDVVAY 385
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 108/224 (48%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G +P+ ++YN L+D K + A+ + + M D P ++ +I VGQ
Sbjct: 198 MVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQ 257
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A ++ + M + GC PD YN I C A R+ DA L++ M E G P+ TYN
Sbjct: 258 LDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNS 317
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
++ + ++ +Y + G + +C L+ LCK + +++ A +L +M
Sbjct: 318 IVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSR-RLDDAEKLLREMERN 376
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G ++ +L C +L ++ F EM++KG P+ +++
Sbjct: 377 GSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITY 420
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 61/111 (54%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+R G D+V+ + LID CK R+++ A K++ +M +PDV++YT +I G Q
Sbjct: 338 LRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQ 397
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGL 111
DK+ EM + GC P Y+ I C + R+RD L+ M+E+G+
Sbjct: 398 LDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGV 448
>gi|449477323|ref|XP_004154991.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g18900-like [Cucumis sativus]
Length = 874
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 110/214 (51%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
+ D +Y +I + + +Q K++++M + P+V++Y II G A +
Sbjct: 376 RHDGHTYTTMIGLLGRAKQFAAINKLLDQMIKDGCQPNVVTYNRIIHSYGRANYLQDAVN 435
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
V K+M+E GC PD Y I + + L A G+ ++M + GL+P+ TY++
Sbjct: 436 VFKQMQEAGCEPDRVTYCTLIDIHAKSGFLDVAMGMYEKMQDAGLTPDTFTYSVMINCLG 495
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+ L ++ L+CRM+ GC+PN + ++ L + EIAL+L+ DM + GF +
Sbjct: 496 KAGHLNAAHRLFCRMVDEGCVPNLVTYNIMIALQAKARNYEIALKLYRDMQQSGFEPDKV 555
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQ 220
++ ++L G L EAE F+EM +K P +
Sbjct: 556 TYCIVMEVLGHCGFLEEAEGIFIEMQKKNWVPDE 589
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 100/219 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E G +PD V+Y LID++ K ++ A + EKM+D ++PD +Y+ +I LG G
Sbjct: 440 MQEAGCEPDRVTYCTLIDIHAKSGFLDVAMGMYEKMQDAGLTPDTFTYSVMINCLGKAGH 499
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A + M + GC P+ YN I A+ A L +M + G P+ TY +
Sbjct: 500 LNAAHRLFCRMVDEGCVPNLVTYNIMIALQAKARNYEIALKLYRDMQQSGFEPDKVTYCI 559
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
V L + ++ M +P+ LV L + V+ A + ++ M++ G
Sbjct: 560 VMEVLGHCGFLEEAEGIFIEMQKKNWVPDEPVYGLLVDLWGKSGNVQKAWEWYHAMLKAG 619
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
+ + L + +L +A + M+ G KPS
Sbjct: 620 LKPNVPTCNSLLSAFLRVHQLSDAYQLLQSMLTFGLKPS 658
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 73/160 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G P++V+YN +I + K R E A K+ M+ PD ++Y ++ LG G
Sbjct: 510 MVDEGCVPNLVTYNIMIALQAKARNYEIALKLYRDMQQSGFEPDKVTYCIVMEVLGHCGF 569
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A + EM++ PD Y + + + ++ A M++ GL PN T N
Sbjct: 570 LEEAEGIFIEMQKKNWVPDEPVYGLLVDLWGKSGNVQKAWEWYHAMLKAGLKPNVPTCNS 629
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLC 160
F + L ++ L M+ G P+ Q+ L+ C
Sbjct: 630 LLSAFLRVHQLSDAYQLLQSMLTFGLKPSLQTYTLLLSCC 669
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 77/172 (44%)
Query: 79 DAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLY 138
D Y I AK+ + L+D+M++ G PN TYN + +N L+ + N++
Sbjct: 378 DGHTYTTMIGLLGRAKQFAAINKLLDQMIKDGCQPNVVTYNRIIHSYGRANYLQDAVNVF 437
Query: 139 CRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDM 198
+M GC P+ + L+ + + +++A+ ++ M + G V+ + L
Sbjct: 438 KQMQEAGCEPDRVTYCTLIDIHAKSGFLDVAMGMYEKMQDAGLTPDTFTYSVMINCLGKA 497
Query: 199 GKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFG 250
G L A + F M+++G P+ V++ + AL A E L M G
Sbjct: 498 GHLNAAHRLFCRMVDEGCVPNLVTYNIMIALQAKARNYEIALKLYRDMQQSG 549
>gi|449440748|ref|XP_004138146.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18900-like [Cucumis sativus]
Length = 874
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 110/214 (51%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
+ D +Y +I + + +Q K++++M + P+V++Y II G A +
Sbjct: 376 RHDGHTYTTMIGLLGRAKQFAAINKLLDQMIKDGCQPNVVTYNRIIHSYGRANYLQDAVN 435
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
V K+M+E GC PD Y I + + L A G+ ++M + GL+P+ TY++
Sbjct: 436 VFKQMQEAGCEPDRVTYCTLIDIHAKSGFLDVAMGMYEKMQDAGLTPDTFTYSVMINCLG 495
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+ L ++ L+CRM+ GC+PN + ++ L + EIAL+L+ DM + GF +
Sbjct: 496 KAGHLNAAHRLFCRMVDEGCVPNLVTYNIMIALQAKARNYEIALKLYRDMQQSGFEPDKV 555
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQ 220
++ ++L G L EAE F+EM +K P +
Sbjct: 556 TYCIVMEVLGHCGFLEEAEGIFIEMQKKNWVPDE 589
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 100/219 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E G +PD V+Y LID++ K ++ A + EKM+D ++PD +Y+ +I LG G
Sbjct: 440 MQEAGCEPDRVTYCTLIDIHAKSGFLDVAMGMYEKMQDAGLTPDTFTYSVMINCLGKAGH 499
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A + M + GC P+ YN I A+ A L +M + G P+ TY +
Sbjct: 500 LNAAHRLFCRMVDEGCVPNLVTYNIMIALQAKARNYEIALKLYRDMQQSGFEPDKVTYCI 559
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
V L + ++ M +P+ LV L + V+ A + ++ M++ G
Sbjct: 560 VMEVLGHCGFLEEAEGIFIEMQKKNWVPDEPVYGLLVDLWGKSGNVQKAWEWYHAMLKAG 619
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
+ + L + +L +A + M+ G KPS
Sbjct: 620 LKPNVPTCNSLLSAFLRVHQLSDAYQLLQSMLTFGLKPS 658
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 73/160 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G P++V+YN +I + K R E A K+ M+ PD ++Y ++ LG G
Sbjct: 510 MVDEGCVPNLVTYNIMIALQAKARNYEIALKLYRDMQQSGFEPDKVTYCIVMEVLGHCGF 569
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A + EM++ PD Y + + + ++ A M++ GL PN T N
Sbjct: 570 LEEAEGIFIEMQKKNWVPDEPVYGLLVDLWGKSGNVQKAWEWYHAMLKAGLKPNVPTCNS 629
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLC 160
F + L ++ L M+ G P+ Q+ L+ C
Sbjct: 630 LLSAFLRVHQLSDAYQLLQSMLTFGLKPSLQTYTLLLSCC 669
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 77/172 (44%)
Query: 79 DAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLY 138
D Y I AK+ + L+D+M++ G PN TYN + +N L+ + N++
Sbjct: 378 DGHTYTTMIGLLGRAKQFAAINKLLDQMIKDGCQPNVVTYNRIIHSYGRANYLQDAVNVF 437
Query: 139 CRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDM 198
+M GC P+ + L+ + + +++A+ ++ M + G V+ + L
Sbjct: 438 KQMQEAGCEPDRVTYCTLIDIHAKSGFLDVAMGMYEKMQDAGLTPDTFTYSVMINCLGKA 497
Query: 199 GKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFG 250
G L A + F M+++G P+ V++ + AL A E L M G
Sbjct: 498 GHLNAAHRLFCRMVDEGCVPNLVTYNIMIALQAKARNYEIALKLYRDMQQSG 549
>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 827
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 108/218 (49%), Gaps = 4/218 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDED--ISPDVISYTSIIGGLGLV 58
M E+ PD +SYN +I C D + ++A +V++M E SPDV+S+ ++I G
Sbjct: 186 MSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQ 245
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
G+ KA ++ EM + G PD YN+ + C A+ + A ++ +MV+KG+ P+ TY
Sbjct: 246 GEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTY 305
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMV 177
N + S + S ++ +M G +P+T + F+ LCK + A +++ M
Sbjct: 306 NAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKD-AEEIFQYMT 364
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
KG I+ +L G+ + F M +KG
Sbjct: 365 TKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKG 402
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 109/226 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV PD+ +YN ++D CK R ++KA ++ +M D+ + PD ++Y +II G G
Sbjct: 258 MVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGH 317
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++ + ++M G PD +++ + + C R +DA + M KG P+ +Y++
Sbjct: 318 WKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSI 377
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ NL+ M G + N L+ ++ ++ A+ ++ +M +G
Sbjct: 378 LLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQG 437
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ L C MG+L +A + F +MI G +P+ + +
Sbjct: 438 VRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSL 483
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 104/227 (45%), Gaps = 1/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV+PD V+YN +I Y +++ K+ KM + + PD ++++S + L G+
Sbjct: 293 MVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGR 352
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A ++ + M G PD +Y+ + Y R D + L M +KG+ N N+
Sbjct: 353 SKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINI 412
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + ++ M G G PN + L+ R ++ A++ ++ M+ G
Sbjct: 413 LISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIG 472
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG-HKPSQVSFRRI 226
V L C G LV+A++ EM+ KG H+P+ V F I
Sbjct: 473 IEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSI 519
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 102/218 (46%), Gaps = 9/218 (4%)
Query: 12 SYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL-KE 70
+Y L+D C+ R+ + V ++ + I T+ + L + D+A DVL
Sbjct: 126 TYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATTFLKCLCHAKRTDEAVDVLLHR 185
Query: 71 MKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKG--LSPNATTYNLFFRVFYWS 128
M E C PDA +YN I++ C R ++A ++ M ++G SP+ ++N F+
Sbjct: 186 MSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQ 245
Query: 129 NDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQ--EKVEIALQLWNDMVEKGFGSYI 185
++ + NL+ M+ G +P+ + +V LCK + +K E L+ MV+KG
Sbjct: 246 GEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLR---QMVDKGVEPDG 302
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + + G E+ K F +M KG P V+F
Sbjct: 303 VTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTF 340
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 111/247 (44%), Gaps = 36/247 (14%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ GV+P++V+Y+ LI +C+ ++ A + +M I P+ Y S+I G + G
Sbjct: 433 MQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGD 492
Query: 61 PDKARDVLKEMKEYGCY-PDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
KA++ + EM G + P+ +++ I + CI R+ DA + + ++ G P T+N
Sbjct: 493 LVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFN 552
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
S + YC ++G K+E A + + MV
Sbjct: 553 -------------SLIDGYC-LVG---------------------KMEKAFGVLDAMVSV 577
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
G ++ ++ L C GK+ + F EM+ K KP+ V++ + + A + A
Sbjct: 578 GIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAA 637
Query: 240 QNLSNKM 246
+ + ++M
Sbjct: 638 KKMFHEM 644
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 94/218 (43%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
+G +P IV++N LID YC ++EKA+ +++ M I PDV++ +++ G G+ D
Sbjct: 541 HIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKID 600
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
+ +EM P YN + A R A + EM++ G + + TY +
Sbjct: 601 DGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILL 660
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
+ ++ + L+ ++ C + ++ + + E A L+ + G
Sbjct: 661 KGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAISTSGLV 720
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQ 220
+ V+ L G + EA+ F M + G PS
Sbjct: 721 PNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSS 758
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 106/233 (45%), Gaps = 1/233 (0%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
+P+IV ++ +I C + +V A + + P ++++ S+I G LVG+ +KA
Sbjct: 510 RPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFG 569
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
VL M G PD N + YC + ++ D L EM+ K + P TYN+
Sbjct: 570 VLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLL 629
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+ ++ ++ M+ +G + + L+K R + + A+ L++ + I
Sbjct: 630 RAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDIT 689
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEA 238
+ + + + L + + EA F + G P+ ++ I+ L++ + +EA
Sbjct: 690 ILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEA 742
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 94/205 (45%), Gaps = 2/205 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G++PD+V+ N L+ YCK +++ + +M + + P ++Y ++ GL G+
Sbjct: 574 MVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGR 633
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A+ + EM + G D Y ++ C +A L ++ + T N
Sbjct: 634 TSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNT 693
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
Y + +L+ + +G +PN + +++ ++ VE A +++ M + G
Sbjct: 694 MINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSG 753
Query: 181 FG-SYILVSDVLFDLLCDMGKLVEA 204
S L++D++ +L G +V+A
Sbjct: 754 CAPSSRLLNDII-RMLLQKGDIVKA 777
>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
Length = 948
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 111/261 (42%), Gaps = 35/261 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G +P++++Y LID +CK E+A K+V M + +S + + Y +IG L G+
Sbjct: 398 MVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGK 457
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A + EM GC PD +N+ I C ++ +A GL +M+ +G+ N TYN
Sbjct: 458 IQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNT 517
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGC---------------------------------- 146
F ++ + L M GC
Sbjct: 518 LIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEE 577
Query: 147 -LPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
P+ SC L+ R KV ALQ DM+++G I+ + L + LC MG+ EA
Sbjct: 578 IFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEAL 637
Query: 206 KSFLEMIEKGHKPSQVSFRRI 226
F + KG P V++ +
Sbjct: 638 NLFNGLQAKGIHPDAVTYNTL 658
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 113/274 (41%), Gaps = 35/274 (12%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ P + ++ ++ +C +V+ A ++ M P+ I Y +I L +
Sbjct: 191 MLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNR 250
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLS-------- 112
++A +L+EM GC PD +N I C A R+ +A+ L D M+ + +
Sbjct: 251 VNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGY 310
Query: 113 -----------------------PNATTYNLFFRVFYWSNDLRSSWN-LYCRMMGTGCLP 148
PN YN + S + + LY M+ G P
Sbjct: 311 LMHGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEP 370
Query: 149 NTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKS 207
+ + ++ LCK+ V AL+ ++MV+KGF ++ +L D C G EA K
Sbjct: 371 DAFTFNIMIDGLCKKGYLVS-ALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKV 429
Query: 208 FLEMIEKGHKPSQVSFR-RIKALMELANKQEALQ 240
M KG + V + I AL + Q+ALQ
Sbjct: 430 VNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQ 463
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 81/177 (45%), Gaps = 4/177 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G D ++YN LI CK EK ++E+M E+I P + S +I G+
Sbjct: 538 MRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGK 597
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A L++M + G PD YN+ I C R ++A L + + KG+ P+A TYN
Sbjct: 598 VNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNT 657
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPN--TQSCM--FLVKLCKRQEKVEIALQLW 173
+ + + L + + G +PN T S + + VK E+ I + W
Sbjct: 658 LISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYFVKNNSDSEQFTILMGNW 714
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 113/251 (45%), Gaps = 7/251 (2%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEK-MRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
P+ V YN LI+ Y + E+A ++ K M PD ++ +I GL G A +
Sbjct: 334 PNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALE 393
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
L EM + G P+ Y I +C +AS +++ M KGLS N YN
Sbjct: 394 FLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALC 453
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEKGFGSYI 185
++ + +Y M GC P+ + L+ LCK +K+E AL L+ DM+ +G +
Sbjct: 454 KDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCK-NDKMEEALGLYRDMLLEGVIANT 512
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLSN 244
+ + L + + +A+K EM +G +++ IKAL + ++ L +
Sbjct: 513 VTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQ 572
Query: 245 KMALFGPSMIP 255
+FG + P
Sbjct: 573 ---MFGEEIFP 580
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 105/249 (42%), Gaps = 32/249 (12%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
+P SYN ++++ + A + M ISP V ++ ++ +V + D A
Sbjct: 162 EPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACS 221
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
+L++M ++GC P++ Y I R+ +A L++EM G P+ T+N
Sbjct: 222 LLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLC 281
Query: 127 WSNDLRSSWNLYCRM---------------MGTGC--------------LPNTQSCMF-- 155
+ + + L+ RM M C +PN + ++
Sbjct: 282 KAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIPNPNTVLYNT 341
Query: 156 LVKLCKRQEKVEIALQ-LWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEK 214
L+ + E A L+ +MV GF +++ D LC G LV A + EM++K
Sbjct: 342 LINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKK 401
Query: 215 GHKPSQVSF 223
G +P+ +++
Sbjct: 402 GFEPNVITY 410
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 78/184 (42%), Gaps = 4/184 (2%)
Query: 43 PDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGL 102
P SY ++ L P A +V +M G P + ++ +C+ + A L
Sbjct: 163 PTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSL 222
Query: 103 MDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKR 162
+ +M + G PN+ Y + +N + + L M GC P+ Q+ ++ +
Sbjct: 223 LRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCK 282
Query: 163 QEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
++ A +L + M+ + F + L+ L LC MGK+ EA M+ K P+ V
Sbjct: 283 AGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARA----MLSKIPNPNTVL 338
Query: 223 FRRI 226
+ +
Sbjct: 339 YNTL 342
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 74/195 (37%), Gaps = 36/195 (18%)
Query: 48 YTSIIGGLGLVGQPDKARDVLKEMKEYGCY------------------------------ 77
Y +I LG VG+ +LK+MK+ GC
Sbjct: 97 YYLLIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFILIMRYYGKAGLPGQATRLLLDMW 156
Query: 78 ------PDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDL 131
P +YN + + A + +M+ +G+SP T+ + + F N++
Sbjct: 157 GVYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEV 216
Query: 132 RSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVL 191
S+ +L M GC+PN+ L+ +V A++L +M G + + +
Sbjct: 217 DSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDV 276
Query: 192 FDLLCDMGKLVEAEK 206
LC G++ EA K
Sbjct: 277 IHGLCKAGRIHEAAK 291
>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g64320, mitochondrial; Flags: Precursor
gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 730
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 113/218 (51%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ PD+ +YN LI Y K+ V A +++ MR++ P+V SYT ++ G +G+ D+A
Sbjct: 384 GIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEA 443
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+VL EM G P+ +N I +C R+ +A + EM KG P+ T+N
Sbjct: 444 YNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISG 503
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
++++ + L M+ G + NT + L+ R+ +++ A +L N+MV +G
Sbjct: 504 LCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLD 563
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
+ + L LC G++ +A F +M+ GH PS +S
Sbjct: 564 EITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNIS 601
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 114/222 (51%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+KP+ V +NCLI +CK+ ++ +A +I +M + PDV ++ S+I GL V + A
Sbjct: 454 GLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHA 513
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+L++M G + YN I + +++A L++EMV +G + TYN +
Sbjct: 514 LWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKG 573
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ ++ + +L+ +M+ G P+ SC L+ R VE A++ +MV +G
Sbjct: 574 LCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPD 633
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
I+ + L + LC G++ + F ++ +G P V+F +
Sbjct: 634 IVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTL 675
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 111/226 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G KP++ SY L+D +CK ++++AY ++ +M + + P+ + + +I +
Sbjct: 415 MRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHR 474
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++ +EM GC PD +N+ I C ++ A L+ +M+ +G+ N TYN
Sbjct: 475 IPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNT 534
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F +++ + L M+ G + + L+K R +V+ A L+ M+ G
Sbjct: 535 LINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDG 594
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ ++L + LC G + EA + EM+ +G P V+F +
Sbjct: 595 HAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSL 640
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 110/238 (46%), Gaps = 6/238 (2%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
MG PD ++N +I CK ++ +A K+V +M +PD I+Y ++ GL +G+ D
Sbjct: 281 MGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDA 340
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEK-GLSPNATTYNLFF 122
A+D+ + + P+ +N I + RL DA ++ +MV G+ P+ TYN
Sbjct: 341 AKDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLI 396
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
++ + + + M GC PN S LV + K++ A + N+M G
Sbjct: 397 YGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLK 456
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
+ + L C ++ EA + F EM KG KP +F I L E+ + AL
Sbjct: 457 PNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHAL 514
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 120/245 (48%), Gaps = 9/245 (3%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDE-DISPDVISYTSIIGGL---GLVGQPD 62
KP+IV +N LI + +++ A ++ M I PDV +Y S+I G GLVG
Sbjct: 350 KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGL-- 407
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
A +VL +M+ GC P+ +Y + +C ++ +A +++EM GL PN +N
Sbjct: 408 -ALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLI 466
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGF 181
F + + + ++ M GC P+ + L+ LC+ E ++ AL L DM+ +G
Sbjct: 467 SAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDE-IKHALWLLRDMISEGV 525
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQN 241
+ + + L + G++ EA K EM+ +G ++++ + + A + + ++
Sbjct: 526 VANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARS 585
Query: 242 LSNKM 246
L KM
Sbjct: 586 LFEKM 590
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 110/250 (44%), Gaps = 32/250 (12%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ P + ++ ++ +C +++ A ++ M P+ + Y ++I L + ++A
Sbjct: 213 IPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEAL 272
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY------- 118
+L+EM GC PDA +N I C R+ +A+ +++ M+ +G +P+ TY
Sbjct: 273 QLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGL 332
Query: 119 ----------NLFFRV----FYWSNDLRSSWNLYCRM-----------MGTGCLPNTQSC 153
+LF+R+ N L + + R+ G +P+ +
Sbjct: 333 CKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTY 392
Query: 154 MFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIE 213
L+ ++ V +AL++ +DM KG + +L D C +GK+ EA EM
Sbjct: 393 NSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSA 452
Query: 214 KGHKPSQVSF 223
G KP+ V F
Sbjct: 453 DGLKPNTVGF 462
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 116/251 (46%), Gaps = 7/251 (2%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PD ++Y L++ CK +V+ A + ++ P+++ + ++I G G+ D A
Sbjct: 317 GFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP----KPEIVIFNTLIHGFVTHGRLDDA 372
Query: 65 RDVLKEM-KEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
+ VL +M YG PD YN+ I Y + A ++ +M KG PN +Y +
Sbjct: 373 KAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVD 432
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
F + ++N+ M G PNT L+ ++ ++ A++++ +M KG
Sbjct: 433 GFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKP 492
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNL 242
+ + L LC++ ++ A +MI +G + V++ I A + +EA + L
Sbjct: 493 DVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEA-RKL 551
Query: 243 SNKMALFGPSM 253
N+M G +
Sbjct: 552 VNEMVFQGSPL 562
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 106/242 (43%), Gaps = 6/242 (2%)
Query: 1 MREM---GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGL 57
REM G KPD+ ++N LI C+ +++ A ++ M E + + ++Y ++I
Sbjct: 482 FREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLR 541
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
G+ +AR ++ EM G D YN+ I+ C A + A L ++M+ G +P+ +
Sbjct: 542 RGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNIS 601
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
N+ S + + M+ G P+ + L+ R ++E L ++ +
Sbjct: 602 CNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQ 661
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQE 237
+G + + L LC G + +A E IE G P+ R L++ QE
Sbjct: 662 AEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNH---RTWSILLQSIIPQE 718
Query: 238 AL 239
L
Sbjct: 719 TL 720
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 96/221 (43%), Gaps = 3/221 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G + Y LI + + + +++ +M+DE I + SI+ G P +
Sbjct: 106 GYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQT 165
Query: 65 RDVLKEMKE-YGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
++ EM+ Y C P +YN + + A+ + +M+ + + P T+ + +
Sbjct: 166 TRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMK 225
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG-FG 182
F N++ S+ +L M GC+PN+ L+ + +V ALQL +M G
Sbjct: 226 AFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVP 285
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+DV+ LC ++ EA K M+ +G P +++
Sbjct: 286 DAETFNDVILG-LCKFDRINEAAKMVNRMLIRGFAPDDITY 325
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 108/246 (43%), Gaps = 13/246 (5%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
+P SYN ++++ + A + M I P + ++ ++ V + D A
Sbjct: 179 EPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALS 238
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
+L++M ++GC P++ Y I + R+ +A L++EM G P+A T+N
Sbjct: 239 LLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLC 298
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+ + + + RM+ G P+ + +L+ + +V+ A L+ + + I+
Sbjct: 299 KFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIV 354
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEK-GHKPSQVSFRRI------KALMELANKQEAL 239
+ + L G+L +A+ +M+ G P ++ + + L+ LA E L
Sbjct: 355 IFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLA--LEVL 412
Query: 240 QNLSNK 245
++ NK
Sbjct: 413 HDMRNK 418
>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 925
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 115/239 (48%), Gaps = 1/239 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G P+ SYN LI YC EKA ++ M +P +++Y II G G
Sbjct: 426 MGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGD 485
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A VL+ MK GC PD +Y I +C ++ ASG+ +EM+++GL PN TY
Sbjct: 486 TDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTA 545
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L + + RM +GC PN Q+ L+ +Q A +L M+E+
Sbjct: 546 LISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEK 605
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEA 238
++ + + LC+ G + A + F +M++ G P+ ++ I+AL + +EA
Sbjct: 606 ISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEA 664
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 114/247 (46%), Gaps = 5/247 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+RE G++P+++ YN +I+ CKD V A I+ K+ + PD +YTS+I G
Sbjct: 220 LRE-GLQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRD 278
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A ++ M E GC P+AA Y+ I C + R+ +A + EM G+ P T+
Sbjct: 279 LDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTA 338
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ +W ++ M GC PN + L Q +A+ L++ M G
Sbjct: 339 PIVALCDMGRIEDAWKIFIDMKKKGCKPNVYT---YTSLISGQRVSRMAIGLFHRMSRDG 395
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
+ + L ++L + ++ A F M + G P+ S+ I+ + + ++A+
Sbjct: 396 VVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAM 455
Query: 240 QNLSNKM 246
L+N +
Sbjct: 456 SMLTNML 462
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 107/222 (48%), Gaps = 3/222 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+KPD +Y +I YC++R ++ A++I +M +E P+ +Y+++I GL G+ ++A
Sbjct: 258 GMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEA 317
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
D + EM +G P + A I C R+ DA + +M +KG PN TY
Sbjct: 318 LDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISG 377
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
S R + L+ RM G +PNT + L+ + +++ AL ++N M + G
Sbjct: 378 QRVS---RMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPN 434
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ L C +G +A M++ P+ V++ I
Sbjct: 435 TSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNII 476
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 104/219 (47%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P +V+YN +I YC + A +++E M+ PD SYT +I G + + + A +
Sbjct: 468 PTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGM 527
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
EM + G P+ Y A I YC ++L A+ +++ M G PN TYN+
Sbjct: 528 FNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTK 587
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
N+ + L M+ P+ + ++ + +AL+++N MV+ G +
Sbjct: 588 QNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHT 647
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
L L G++ EAE+ F E+ ++G P +V++ ++
Sbjct: 648 YSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKM 686
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 111/247 (44%), Gaps = 22/247 (8%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G +P++ +YN LI K A ++ + M +E ISPDV++Y+++I GL G
Sbjct: 566 MKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGA 625
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A ++ +M ++GC P+ Y++ I+ R+ +A + E+ ++GL P+ TY
Sbjct: 626 IPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVK 685
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
V S + +++ M+ GC P Q+ L+K + + + L N
Sbjct: 686 MIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQNEMVYHKLVALPNAASTST 745
Query: 181 FGSYILVSDVL-----------FDL-----------LCDMGKLVEAEKSFLEMIEKGHKP 218
F I+ DV+ F+L L G+ EA + M+ + P
Sbjct: 746 FDDQIINKDVISVLSSKLAELDFELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQCP 805
Query: 219 SQVSFRR 225
+Q +++
Sbjct: 806 NQDTYKH 812
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 102/223 (45%), Gaps = 3/223 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G KP++ +Y LI R A + +M + + P+ ++Y +++ L +
Sbjct: 359 MKKKGCKPNVYTYTSLIS---GQRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENME 415
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A V M ++GC P+ ++YN IR YC A ++ M++ +P TYN+
Sbjct: 416 IDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNI 475
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + S D + + M GC P+ S L+ + K+E+A ++N+M+++G
Sbjct: 476 IIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRG 535
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ L C KL A + M G +P+ ++
Sbjct: 536 LCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTY 578
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 85/179 (47%)
Query: 45 VISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMD 104
+ +YT+++ L + D ++ G P+ YN+ I C +RDA +++
Sbjct: 193 LFTYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVINALCKDGNVRDAESIIN 252
Query: 105 EMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQE 164
++ + G+ P+ TY + + DL S++ ++ RM GC PN + L+
Sbjct: 253 KVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSG 312
Query: 165 KVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+V AL ++M G + LCDMG++ +A K F++M +KG KP+ ++
Sbjct: 313 RVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTY 371
>gi|224061569|ref|XP_002300545.1| predicted protein [Populus trichocarpa]
gi|222847803|gb|EEE85350.1| predicted protein [Populus trichocarpa]
Length = 567
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 121/251 (48%), Gaps = 4/251 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G KPD+ L+ CK +++KA +++E + I PD SYT ++ L G A
Sbjct: 92 GHKPDVAQATQLLYDLCKSNKMKKATRVMEMTIESGIIPDAASYTFLVNNLCKRGNIGYA 151
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++++M+E GC + YN+ +R C L + L+D+++ KGL PN T++
Sbjct: 152 MQLVEKMEENGCPTNTVTYNSLVRGLCKHGNLNQSLQLLDKLMRKGLVPNEFTHSFLLEA 211
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
Y + + L ++ G PN S + L LCK + + E A+Q + D+ KGF
Sbjct: 212 AYKERGVDEAMKLLDGIIAKGGKPNLVSYNVLLTGLCK-EGRTEEAIQFFRDLPSKGFNP 270
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEALQNL 242
++ +++ LC G+ EA + EM + PS V++ I +L Q A Q L
Sbjct: 271 NVVSCNIILRSLCCEGRWEEANELVAEMDSEERSPSLVTYNILIGSLASHGRIQHAFQVL 330
Query: 243 SNKM-ALFGPS 252
M A F PS
Sbjct: 331 DEMMRASFQPS 341
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 99/205 (48%)
Query: 18 DVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCY 77
D +D ++ A+ +E + + PDV T ++ L + KA V++ E G
Sbjct: 70 DTRNRDIRLNDAFFHLEFIVRKGHKPDVAQATQLLYDLCKSNKMKKATRVMEMTIESGII 129
Query: 78 PDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNL 137
PDAA+Y + N C + A L+++M E G N TYN R +L S L
Sbjct: 130 PDAASYTFLVNNLCKRGNIGYAMQLVEKMEENGCPTNTVTYNSLVRGLCKHGNLNQSLQL 189
Query: 138 YCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCD 197
++M G +PN + FL++ ++ V+ A++L + ++ KG ++ +VL LC
Sbjct: 190 LDKLMRKGLVPNEFTHSFLLEAAYKERGVDEAMKLLDGIIAKGGKPNLVSYNVLLTGLCK 249
Query: 198 MGKLVEAEKSFLEMIEKGHKPSQVS 222
G+ EA + F ++ KG P+ VS
Sbjct: 250 EGRTEEAIQFFRDLPSKGFNPNVVS 274
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 101/221 (45%), Gaps = 5/221 (2%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G KP++VSYN L+ CK+ + E+A + + + +P+V+S I+ L G+ ++A
Sbjct: 232 GGKPNLVSYNVLLTGLCKEGRTEEAIQFFRDLPSKGFNPNVVSCNIILRSLCCEGRWEEA 291
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+++ EM P YN I + R++ A ++DEM+ P+A T+N +
Sbjct: 292 NELVAEMDSEERSPSLVTYNILIGSLASHGRIQHAFQVLDEMMRASFQPSAATFNPI--I 349
Query: 125 FYWSNDLRSSWNLYC--RMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
+ + ++ + C +M+ C PN + + LC+ +V+ A + + K
Sbjct: 350 SHLCKEGKADLVVKCLDQMIHHCCNPNDGTFNAIAVLCE-GGRVQRAFSIIQSLGNKQNS 408
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
S + LC G A + EMI+ G P ++
Sbjct: 409 STHDFYRGVISSLCRKGNTYPAFQLLYEMIQSGFVPDPYTY 449
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 102/248 (41%), Gaps = 3/248 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G + V+YN L+ CK + ++ ++++K+ + + P+ +++ ++
Sbjct: 158 MEENGCPTNTVTYNSLVRGLCKHGNLNQSLQLLDKLMRKGLVPNEFTHSFLLEAAYKERG 217
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A +L + G P+ +YN + C R +A ++ KG +PN + N+
Sbjct: 218 VDEAMKLLDGIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIQFFRDLPSKGFNPNVVSCNI 277
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
R + L M P+ + L+ +++ A Q+ ++M+
Sbjct: 278 ILRSLCCEGRWEEANELVAEMDSEERSPSLVTYNILIGSLASHGRIQHAFQVLDEMMRAS 337
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEA-- 238
F + + LC GK K +MI P+ +F I L E Q A
Sbjct: 338 FQPSAATFNPIISHLCKEGKADLVVKCLDQMIHHCCNPNDGTFNAIAVLCEGGRVQRAFS 397
Query: 239 -LQNLSNK 245
+Q+L NK
Sbjct: 398 IIQSLGNK 405
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 56/109 (51%)
Query: 13 YNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMK 72
Y +I C+ A++++ +M PD +Y+S+I GL + G D+A ++ + ++
Sbjct: 414 YRGVISSLCRKGNTYPAFQLLYEMIQSGFVPDPYTYSSLIRGLCVEGMLDEALEIFRLLE 473
Query: 73 EYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
E P +NA I +C + R + + + M+ KG +PN TTY +
Sbjct: 474 ENDYRPILGNFNALILGFCKSGRTDLSLEIFEMMILKGYTPNETTYTIL 522
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 76/169 (44%), Gaps = 1/169 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P+ ++N I V C+ +V++A+ I++ + ++ S Y +I L G A +
Sbjct: 375 PNDGTFNA-IAVLCEGGRVQRAFSIIQSLGNKQNSSTHDFYRGVISSLCRKGNTYPAFQL 433
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L EM + G PD Y++ IR C+ L +A + + E P +N F
Sbjct: 434 LYEMIQSGFVPDPYTYSSLIRGLCVEGMLDEALEIFRLLEENDYRPILGNFNALILGFCK 493
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDM 176
S S ++ M+ G PN + LV+ +E+ E+A ++ ++
Sbjct: 494 SGRTDLSLEIFEMMILKGYTPNETTYTILVEGIAHEEEKELAAEVLKEL 542
Score = 37.0 bits (84), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 40/71 (56%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+ E +P + ++N LI +CK + + + +I E M + +P+ +YT ++ G+ +
Sbjct: 472 LEENDYRPILGNFNALILGFCKSGRTDLSLEIFEMMILKGYTPNETTYTILVEGIAHEEE 531
Query: 61 PDKARDVLKEM 71
+ A +VLKE+
Sbjct: 532 KELAAEVLKEL 542
>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
Length = 855
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 115/242 (47%), Gaps = 16/242 (6%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD +Y+ +I C +VEKA+ + ++M+ ++PDV +YT +I G
Sbjct: 279 MMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGL 338
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A+ + +EM+ GC P Y A I Y AK++ A+ + MV+ G PN TY
Sbjct: 339 IEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGA 398
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTG----------------CLPNTQSCMFLVKLCKRQE 164
+ ++ ++ +Y +++GT PN + LV +
Sbjct: 399 LVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAH 458
Query: 165 KVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
KV+ A +L + M+ G +V D L D C GK+ A++ FL+M + G+ PS ++
Sbjct: 459 KVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYT 518
Query: 225 RI 226
+
Sbjct: 519 SL 520
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 122/268 (45%), Gaps = 16/268 (5%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR +G P +V+Y LI Y K +QV +A I +M D P+ ++Y +++ GL G
Sbjct: 349 MRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGN 408
Query: 61 PDKARDVLKEM----------------KEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMD 104
KA +V ++ + P+ Y A + C A ++ A L+D
Sbjct: 409 ISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLD 468
Query: 105 EMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQE 164
M+ G PN Y+ F + + S+ ++ +M G LP+ + L+ +
Sbjct: 469 AMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDG 528
Query: 165 KVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
++++A+++ + M++ ++ + D LC +G+ +A K M EKG P+ V++
Sbjct: 529 RLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYT 588
Query: 225 RIKALMELANKQEALQNLSNKMALFGPS 252
+ + A K + +L +M+ G S
Sbjct: 589 ALIDGLGKAGKIDLSLDLFTQMSRKGCS 616
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 112/240 (46%), Gaps = 16/240 (6%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKM------RDED----------ISPD 44
M + G +P+ V+Y L+D CK + KA+++ K+ D D ++P+
Sbjct: 384 MVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPN 443
Query: 45 VISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMD 104
V++Y +++ GL + D A ++L M GC P+ Y+A I +C A ++ A +
Sbjct: 444 VVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFL 503
Query: 105 EMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQE 164
+M + G P+ TY + L + + +M+ C PN + ++ R
Sbjct: 504 QMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIG 563
Query: 165 KVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
+ E AL+L + M EKG ++ L D L GK+ + F +M KG P+ V++R
Sbjct: 564 ESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYR 623
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 123/277 (44%), Gaps = 38/277 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G P + +Y LID KD +++ A K++ +M + +P+V++YT++I GL +G+
Sbjct: 505 MTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGE 564
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA +L M+E GC P+ Y A I A ++ + L +M KG SPN TY +
Sbjct: 565 SEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRV 624
Query: 121 FF-------------------RVFYW--------------SNDLRSSWNLYCRMMGTGCL 147
+ YW S +S + M G +
Sbjct: 625 LINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTV 684
Query: 148 PNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDV---LFDLLCDMGKLVEA 204
P L+ + ++EIA++L +M+E S +D+ L LC ++ EA
Sbjct: 685 PIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVP-SSVKTDNDMYASLIQALCLASQVEEA 743
Query: 205 EKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEALQ 240
+ + EM +G P F IK L+E+ EALQ
Sbjct: 744 FRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQ 780
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 94/206 (45%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ P++V+Y L+D CK +V+ A+++++ M P+ I Y ++I G G+ D A+
Sbjct: 440 LAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQ 499
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+V +M + G P Y + I RL A ++ +M++ +PN TY
Sbjct: 500 EVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGL 559
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ + L M GC PN + L+ + K++++L L+ M KG
Sbjct: 560 CRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNY 619
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEM 211
+ VL + LC G L +A EM
Sbjct: 620 VTYRVLINHLCAAGLLDKARLLLGEM 645
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 110/259 (42%), Gaps = 15/259 (5%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G D + C CK+ + A ++E+ ED D + T +I GL
Sbjct: 66 MSESGFCMDRFTVGCFAHALCKEGRWADALDMIER---EDFKLDTVLCTHMISGLMEASY 122
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A L M+ C P+ Y + + K+L +++ M+ +G +PN + +N
Sbjct: 123 FDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNS 182
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPN-TQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ D ++ L RM GC P +F+ +C QEK+ L D+ EK
Sbjct: 183 LVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICG-QEKLPSPDLL--DLAEK 239
Query: 180 GFGSYILVSDVLFDL--------LCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALME 231
+G + + VL + LC +GK +A + EM+ KG P ++ ++ +
Sbjct: 240 IYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLC 299
Query: 232 LANKQEALQNLSNKMALFG 250
A K E L +M + G
Sbjct: 300 HATKVEKAFLLFQEMKMVG 318
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 90/235 (38%), Gaps = 70/235 (29%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P++V+Y +ID C+ + EKA K++ M ++ SP+V++YT++I GLG G+ D + D+
Sbjct: 547 PNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDL 606
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDAS--------------------------- 100
+M GC P+ Y I + C A L A
Sbjct: 607 FTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSK 666
Query: 101 ------GLMDEMVEKGLSPNATTYNLFFRVFYWS-----------------------NDL 131
G+++EM G P A Y + F + ND+
Sbjct: 667 SFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDM 726
Query: 132 RSS--------------WNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQL 172
+S + LY M G +P + L+K +K + ALQL
Sbjct: 727 YASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQL 781
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 98/249 (39%), Gaps = 11/249 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P+ +N L+ YC ++ AYK++ +M P + Y IG + GQ
Sbjct: 168 MMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSI--CGQ 225
Query: 61 P--------DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLS 112
D A + EM C + R C + A L+ EM+ KG
Sbjct: 226 EKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFV 285
Query: 113 PNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQL 172
P+ +TY+ + + ++ L+ M G P+ + L+ + +E A L
Sbjct: 286 PDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWL 345
Query: 173 WNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALME 231
+ +M G ++ L ++ +A F M++ G +P+ V++ + L +
Sbjct: 346 FEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCK 405
Query: 232 LANKQEALQ 240
N +A +
Sbjct: 406 AGNISKAFE 414
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 97/246 (39%), Gaps = 8/246 (3%)
Query: 27 EKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAA 86
++A + +MR P+V++Y +++ G Q + ++ M GC P+ + +N+
Sbjct: 124 DEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSL 183
Query: 87 IRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRS------SWNLYCR 140
+ +YC K A L++ M G P YN+F L S + +Y
Sbjct: 184 VHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGE 243
Query: 141 MMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGK 200
M+ C+ N + + K + A QL +M+ KGF + LC K
Sbjct: 244 MLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATK 303
Query: 201 LVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFGPSMIPKREEY 260
+ +A F EM G P ++ + A E Q L +M G S P Y
Sbjct: 304 VEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCS--PTVVTY 361
Query: 261 LAEMSA 266
A + A
Sbjct: 362 TALIHA 367
>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 559
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 117/221 (52%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
V+P++V YN +ID CK + V +A+ + +M + ISPDV++Y ++I G +VG+ A
Sbjct: 208 VQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDAT 267
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
D+ +M P+ +N + +C +RL++A ++ M+++G+ P+ TYN +
Sbjct: 268 DLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRY 327
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
++ + +++ + G PN S ++ + +KV+ A+ L+ +M +
Sbjct: 328 CLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDV 387
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + L D LC +GK+ A K EM ++G ++++ I
Sbjct: 388 VTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSI 428
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 112/227 (49%), Gaps = 2/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+KPD+ +YN L+D YC ++V KA I + ++P++ SY+ +I G + +
Sbjct: 308 MMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKK 367
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A ++ KEM PD YN+ I C ++ A L+DEM ++G+ + TYN
Sbjct: 368 VDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNS 427
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
++ + + L +M G P+ + LV LCK ++E A ++ D++ K
Sbjct: 428 ILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCK-NGRLEDARIVFEDLLVK 486
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G+ + + + C G E+ +M E G P+ V++ I
Sbjct: 487 GYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEII 533
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 117/239 (48%), Gaps = 3/239 (1%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
+G + VSY LI+ CK Q A +++ ++ + + P+V+ Y +II + V ++
Sbjct: 171 LGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNE 230
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
A D+ EM G PD YNA I +CI +++DA+ L ++M+ + ++PN T+N+
Sbjct: 231 AFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVD 290
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEKGFG 182
F L+ + N+ MM G P+ + L+ + C +E V A ++N + ++G
Sbjct: 291 GFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKE-VNKAKHIFNTISQRGVN 349
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQ 240
I ++ C + K+ EA F EM P V++ I L +L AL+
Sbjct: 350 PNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALK 408
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 117/227 (51%), Gaps = 2/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ PD+V+YN LI +C +++ A + KM E+I+P+V ++ ++ G +
Sbjct: 238 MVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERR 297
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A++VL M + G PD YN+ + YC+ K + A + + + ++G++PN +Y++
Sbjct: 298 LKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSI 357
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
F + + NL+ M +P+ + L+ LCK K+ AL+L ++M ++
Sbjct: 358 MIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLG-KISYALKLVDEMHDR 416
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G + + + D LC ++ +A +M ++G +P ++ +
Sbjct: 417 GVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTL 463
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 108/221 (48%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
+MG +P++++ LI C Q+ +A + +K+ + +SY ++I GL VGQ
Sbjct: 135 KMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTS 194
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
A +L+ + P+ YN I + C K + +A L EMV KG+SP+ TYN
Sbjct: 195 AALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALI 254
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
F ++ + +L+ +M+ PN + LV ++ +++ A + M+++G
Sbjct: 255 SGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIK 314
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + L D C + ++ +A+ F + ++G P+ S+
Sbjct: 315 PDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSY 355
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/224 (19%), Positives = 89/224 (39%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+ + KP I + ++ K + +M I+ D++ + +I +GQ
Sbjct: 63 LHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQ 122
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ VL ++ + G P+ I+ C+ ++ A D++V G N +Y
Sbjct: 123 NPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGT 182
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++ L R+ G PN ++ + + V A L+++MV KG
Sbjct: 183 LINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKG 242
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
++ + L C +GK+ +A F +MI + P+ +F
Sbjct: 243 ISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFN 286
>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
Length = 896
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 116/235 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G D +YN ++D +CK +++KAY+++E+M+ + + P V +Y SII GL + +
Sbjct: 592 MKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDR 651
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + +E K G + Y++ I + R+ +A +++EM++KGL+PN T+N
Sbjct: 652 LDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNS 711
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ + + M C PNT + L+ R +K A W +M ++G
Sbjct: 712 LMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQG 771
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANK 235
++ + L +G + +A F G P SF + M AN+
Sbjct: 772 LVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAASFNALIEGMSHANR 826
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 106/226 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ P++++ N ++D CK ++ E AY++ E +P+ ++Y S+I GLG G
Sbjct: 417 MEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGN 476
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A + + M + G + Y + IRN+ + R D + EM +G P+ T N
Sbjct: 477 VDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNT 536
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + D+ ++ + G G LP+ +S L+ + + +++ M ++G
Sbjct: 537 YMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQG 596
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
F + + D C GKL +A + EM K P+ ++ I
Sbjct: 597 FALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSI 642
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 116/228 (50%), Gaps = 5/228 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
++ G+KPD VSY +I V CK ++ +A ++ +M E P +Y ++I G G GQ
Sbjct: 278 LKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQ 337
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLR-DASGLMDEMVEKGLSPNATTYN 119
+ A +L ++KE GC P ++N+ + C+ K+ + D + + E ++K PN++TYN
Sbjct: 338 FENAYKLLDQLKERGCIPSVVSFNSILT--CLGKKRKVDEALTLFEAMKKDAEPNSSTYN 395
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVE 178
+ + + + ++ + M G PN + +V +LCK +K E A +++ +
Sbjct: 396 IIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCK-AKKFEPAYEMFETASQ 454
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+G + L D L G + +A + F M++ GH + V + +
Sbjct: 455 RGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSL 502
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 105/225 (46%), Gaps = 7/225 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E+G + + + L+ ++ +VE A +V++++ + PD++ Y I G G
Sbjct: 208 MQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGN 267
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A E+K G PD +Y + I C A RL +A L +M + P A YN
Sbjct: 268 VDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNT 327
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDM---V 177
+ + +++ L ++ GC+P+ S ++ ++ KV+ AL L+ M
Sbjct: 328 MIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKKDA 387
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
E +Y +++ D+LC GK+ EA EM G P+ ++
Sbjct: 388 EPNSSTY----NIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLT 428
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 114/273 (41%), Gaps = 36/273 (13%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVG--- 59
+ G P+ V+Y LID K V+ AY++ E M D + + + YTS+I + G
Sbjct: 454 QRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKE 513
Query: 60 --------------QPD------------------KARDVLKEMKEYGCYPDAAAYNAAI 87
QPD K R + +++K YG PD +Y+ I
Sbjct: 514 DGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILI 573
Query: 88 RNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCL 147
A + R+ S + M ++G + +A YN F S L ++ + M
Sbjct: 574 HGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVP 633
Query: 148 PNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKS 207
P + ++ + ++++ A L+ + KG ++V L D +G++ EA
Sbjct: 634 PTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLI 693
Query: 208 FLEMIEKGHKPSQVSFRRI-KALMELANKQEAL 239
EM++KG P+ ++ + AL++ EAL
Sbjct: 694 LEEMMKKGLTPNVYTWNSLMDALVKAEEINEAL 726
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 94/207 (45%), Gaps = 11/207 (5%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ P++ ++N L+D K ++ +A + M++ SP+ +Y+ +I GL V +
Sbjct: 697 MMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQK 756
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA +EM++ G P+ Y I + DA L + G +P+A ++N
Sbjct: 757 YNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAASFNA 816
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+N +++++ GC N ++C+ L+ + E +E A + G
Sbjct: 817 LIEGMSHANRAIEAYHVFEETRLKGCRINVKACISLLDALNKAECLEQAAVV-------G 869
Query: 181 FGS----YILVSDVLFDLLCDMGKLVE 203
FG + DLL G+LV+
Sbjct: 870 FGENTVRHFFQWTEGLDLLLSAGQLVK 896
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 85/176 (48%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G++ +++ Y+ LID + K ++++AY I+E+M + ++P+V ++ S++ L + ++A
Sbjct: 666 GIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEA 725
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ MKE C P+ Y+ I C ++ A EM ++GL PN TY
Sbjct: 726 LICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAG 785
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++ + +L+ R G P+ S L++ + A ++ + KG
Sbjct: 786 LAKVGNITDACSLFERFKANGGTPDAASFNALIEGMSHANRAIEAYHVFEETRLKG 841
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 93/211 (44%)
Query: 16 LIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYG 75
L+ + R+++ A +++ MR P +YT +IG + QP++A ++L++M+E G
Sbjct: 153 LVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVG 212
Query: 76 CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSW 135
+ +R R+ A L+DE+ L P+ YN+ F + ++ +W
Sbjct: 213 YEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAW 272
Query: 136 NLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLL 195
+ + G P+ S ++ + + ++ A +L+ M + + +
Sbjct: 273 KFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGY 332
Query: 196 CDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G+ A K ++ E+G PS VSF I
Sbjct: 333 GSAGQFENAYKLLDQLKERGCIPSVVSFNSI 363
>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats [Arabidopsis thaliana]
gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 632
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 131/261 (50%), Gaps = 4/261 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E + P++V+++ LID + K+ ++ +A K+ ++M I PD+ +Y+S+I G + +
Sbjct: 319 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 378
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A+ + + M C+P+ Y+ I+ +C AKR+ + L EM ++GL N TY
Sbjct: 379 LDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTT 438
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F+ + D ++ ++ +M+ G PN + L+ + K+ A+ ++ +
Sbjct: 439 LIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRST 498
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
I +++ + +C GK+ + + F + KG P+ +++ I +K+EA
Sbjct: 499 MEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEA- 557
Query: 240 QNLSNKMALFGPSMIPKREEY 260
+L KM GP +P Y
Sbjct: 558 DSLLKKMKEDGP--LPNSGTY 576
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 107/226 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++G +PDIV+ + L++ YC +++ A +V++M + PD ++T++I GL L +
Sbjct: 144 MMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNK 203
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++ +M + GC PD Y + C + A L+ +M + + + YN
Sbjct: 204 ASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNT 263
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + NL+ M G P+ + L+ + A +L +DM+E+
Sbjct: 264 IIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERK 323
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ L D GKLVEAEK + EMI++ P ++ +
Sbjct: 324 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 369
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 105/220 (47%), Gaps = 2/220 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P IV +N L+ K + E + E+M+ IS D+ +Y+ I Q A V
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L +M + G PD ++ + YC +KR+ DA L+D+MVE G P+ T+ +
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYIL 186
N + L +M+ GC P+ + +V LCKR + +++AL L M + + ++
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGD-IDLALSLLKKMEKGKIEADVV 259
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + + D LC + +A F EM KG +P ++ +
Sbjct: 260 IYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSL 299
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 106/226 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G +PD+V+Y +++ CK ++ A +++KM I DV+ Y +II GL
Sbjct: 214 MVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKH 273
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A ++ EM G PD Y++ I C R DAS L+ +M+E+ ++PN T++
Sbjct: 274 MDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 333
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F L + LY M+ P+ + L+ ++++ A ++ M+ K
Sbjct: 334 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 393
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ L C ++ E + F EM ++G + V++ +
Sbjct: 394 CFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTL 439
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 105/224 (46%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ +G+ D+ +Y+ I+ +C+ Q+ A ++ KM PD+++ +S++ G +
Sbjct: 109 MQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKR 168
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A ++ +M E G PD + I + + +A L+D+MV++G P+ TY
Sbjct: 169 ISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGT 228
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
D+ + +L +M + ++ LCK + ++ AL L+ +M K
Sbjct: 229 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKH-MDDALNLFTEMDNK 287
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G + L LC+ G+ +A + +MIE+ P+ V+F
Sbjct: 288 GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTF 331
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 71/145 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +GV P+I++YN L+D CK+ ++ KA + E ++ + PD+ +Y +I G+ G+
Sbjct: 459 MVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 518
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ ++ + G P+ AYN I +C +A L+ +M E G PN+ TYN
Sbjct: 519 VEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNT 578
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTG 145
R D +S L M G
Sbjct: 579 LIRARLRDGDREASAELIKEMRSCG 603
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 99/212 (46%), Gaps = 4/212 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ + V+Y LI + + R + A + ++M + P++++Y ++ GL G+
Sbjct: 424 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGK 483
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA V + ++ PD YN I C A ++ D L + KG+SPN YN
Sbjct: 484 LAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNT 543
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + +L +M G LPN+ + L++ R E + +L +M G
Sbjct: 544 MISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCG 603
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMI 212
F ++ ++L D G+L +KSFL+M+
Sbjct: 604 FAGDASTIGLVTNMLHD-GRL---DKSFLDML 631
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 69/165 (41%)
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
D A D+ +M + +P +N + + L ++M G+S + TY++F
Sbjct: 65 DDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIF 124
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
F + L + + +MM G P+ + L+ +++ A+ L + MVE G+
Sbjct: 125 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 184
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
L L K EA +M+++G +P V++ +
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTV 229
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 32/156 (20%), Positives = 64/156 (41%)
Query: 95 RLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCM 154
++ DA L +MV+ P+ +N N +L +M G + +
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 155 FLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEK 214
+ R+ ++ +AL + M++ G+ I+ L + C ++ +A +M+E
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 215 GHKPSQVSFRRIKALMELANKQEALQNLSNKMALFG 250
G+KP +F + + L NK L ++M G
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG 218
>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
Length = 772
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 114/226 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + P+IV++N LI C++ E+ ++++ +M + +PD+ Y +II G+ G
Sbjct: 242 MVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGH 301
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A ++L M YG P+ YN ++ C A+R ++A L+ EM +K + T+N+
Sbjct: 302 LEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNI 361
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + + L +M+ GC+P+ + ++ ++ ++ A+ L M G
Sbjct: 362 LVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCG 421
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ ++ LC G+ V+AE+ +MI++G P+ V+F +
Sbjct: 422 CKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTL 467
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 93/179 (51%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
D V++N L+D +C++ V++ +++E+M PDVI+YT++I G G D+A +L
Sbjct: 355 DDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLL 414
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
K M GC P+ +Y ++ C A R DA LM +M+++G PN T+N
Sbjct: 415 KSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKK 474
Query: 129 NDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ + L +M+ GC P+ S ++ + K E AL+L N MV KG ++
Sbjct: 475 GLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTII 533
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 116/253 (45%), Gaps = 2/253 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G PDI Y +ID CK+ +E A +I+ +M + P+V+ Y +++ GL +
Sbjct: 277 MSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAER 336
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++L EM + C D +N + +C + L+++M+ G P+ TY
Sbjct: 337 WKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTT 396
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
F + + L M GC PNT S ++K LC V+ A +L + M+++
Sbjct: 397 VINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVD-AEELMSQMIQQ 455
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
G + + L + LC G + +A + +M+ G P +S+ + + A K E
Sbjct: 456 GCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEA 515
Query: 240 QNLSNKMALFGPS 252
L N M G S
Sbjct: 516 LELLNVMVNKGIS 528
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 118/252 (46%), Gaps = 4/252 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD+++Y +I+ +CK+ +++A +++ M P+ +SYT ++ GL G+
Sbjct: 382 MLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGR 441
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +++ +M + GC P+ +N I C + A L+ +M+ G SP+ +Y+
Sbjct: 442 WVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYST 501
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + L M+ G PNT + R+ +V +Q+++++ +
Sbjct: 502 VIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTT 561
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALME--LANK-Q 236
S ++ + + LC + A F M+ G P++ ++ IK L LA + Q
Sbjct: 562 IRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQ 621
Query: 237 EALQNLSNKMAL 248
E L L ++ AL
Sbjct: 622 ELLSELCSRGAL 633
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 99/219 (45%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G P Y+ +++ C+ + +++E M + + D + ++ + G D+A
Sbjct: 141 GCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEA 200
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+L+++ +GC D +YNA ++ C+AKR D LMDEMV +PN T+N
Sbjct: 201 VGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGY 260
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + +M GC P+ + ++ ++ +E+A ++ N M G
Sbjct: 261 LCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPN 320
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + + LC + EAE+ EM +K V+F
Sbjct: 321 VVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTF 359
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 101/244 (41%), Gaps = 9/244 (3%)
Query: 10 IVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLK 69
+V+YN ++ YC+ Q+ A ++ + + P+ ++ ++ GL G+ A +VL
Sbjct: 79 VVAYNAMVAGYCRAGQLAAARRLAAAV---PVPPNAYTFFPVVRGLCTRGRIADALEVLD 135
Query: 70 EMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSN 129
EM GC P Y+ + C + R++ +++ M KG + + NL
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195
Query: 130 DLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LC--KRQEKVEIALQLWNDMVEKGFGSYIL 186
+ + L ++ GC + S ++K LC KR VE +L ++MV I+
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVE---ELMDEMVRVDCAPNIV 252
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKM 246
+ L LC G + +M E G P + I + E + N+M
Sbjct: 253 TFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRM 312
Query: 247 ALFG 250
+G
Sbjct: 313 PSYG 316
>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
Length = 773
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 114/226 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + P+IV++N LI C++ E+ ++++ +M + +PD+ Y +II G+ G
Sbjct: 242 MVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGH 301
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A ++L M YG P+ YN ++ C A+R ++A L+ EM +K + T+N+
Sbjct: 302 LEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNI 361
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + + L +M+ GC+P+ + ++ ++ ++ A+ L M G
Sbjct: 362 LVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCG 421
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ ++ LC G+ V+AE+ +MI++G P+ V+F +
Sbjct: 422 CKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTL 467
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 93/179 (51%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
D V++N L+D +C++ V++ +++E+M PDVI+YT++I G G D+A +L
Sbjct: 355 DDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLL 414
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
K M GC P+ +Y ++ C A R DA LM +M+++G PN T+N
Sbjct: 415 KSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKK 474
Query: 129 NDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ + L +M+ GC P+ S ++ + K E AL+L N MV KG ++
Sbjct: 475 GLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTII 533
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 116/253 (45%), Gaps = 2/253 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G PDI Y +ID CK+ +E A +I+ +M + P+V+ Y +++ GL +
Sbjct: 277 MSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAER 336
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++L EM + C D +N + +C + L+++M+ G P+ TY
Sbjct: 337 WKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTT 396
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
F + + L M GC PNT S ++K LC V+ A +L + M+++
Sbjct: 397 VINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVD-AEELMSQMIQQ 455
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
G + + L + LC G + +A + +M+ G P +S+ + + A K E
Sbjct: 456 GCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEA 515
Query: 240 QNLSNKMALFGPS 252
L N M G S
Sbjct: 516 LELLNVMVNKGIS 528
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 118/252 (46%), Gaps = 4/252 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD+++Y +I+ +CK+ +++A +++ M P+ +SYT ++ GL G+
Sbjct: 382 MLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGR 441
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +++ +M + GC P+ +N I C + A L+ +M+ G SP+ +Y+
Sbjct: 442 WVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYST 501
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + L M+ G PNT + R+ +V +Q+++++ +
Sbjct: 502 VIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTT 561
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALME--LANK-Q 236
S ++ + + LC + A F M+ G P++ ++ IK L LA + Q
Sbjct: 562 IRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQ 621
Query: 237 EALQNLSNKMAL 248
E L L ++ AL
Sbjct: 622 ELLSELCSRGAL 633
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 99/219 (45%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G P Y+ +++ C+ + +++E M + + D + ++ + G D+A
Sbjct: 141 GCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEA 200
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+L+++ +GC D +YNA ++ C+AKR D LMDEMV +PN T+N
Sbjct: 201 VGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGY 260
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + +M GC P+ + ++ ++ +E+A ++ N M G
Sbjct: 261 LCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPN 320
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + + LC + EAE+ EM +K V+F
Sbjct: 321 VVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTF 359
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 101/244 (41%), Gaps = 9/244 (3%)
Query: 10 IVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLK 69
+V+YN ++ YC+ Q+ A ++ + + P+ ++ ++ GL G+ A +VL
Sbjct: 79 VVAYNAMVAGYCRAGQLAAARRLAAAV---PVPPNAYTFFPVVRGLCTRGRIADALEVLD 135
Query: 70 EMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSN 129
EM GC P Y+ + C + R++ +++ M KG + + NL
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195
Query: 130 DLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LC--KRQEKVEIALQLWNDMVEKGFGSYIL 186
+ + L ++ GC + S ++K LC KR VE +L ++MV I+
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVE---ELMDEMVRVDCAPNIV 252
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKM 246
+ L LC G + +M E G P + I + E + N+M
Sbjct: 253 TFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRM 312
Query: 247 ALFG 250
+G
Sbjct: 313 PSYG 316
>gi|297734265|emb|CBI15512.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 102/218 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ P++ ++N L V CKD K K +EKM +E PD+++Y ++I G+
Sbjct: 249 MERFGIAPNLYTFNILTHVLCKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLINSYCRKGR 308
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A + K M G PD +Y A + C R+R+A L MV +GLSP+ TYN
Sbjct: 309 LDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTYNT 368
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ S +L M+ G P++ +C LV+ ++ K AL L ++ G
Sbjct: 369 LIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSALNLVVELQRFG 428
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
+ L LC + A+ M + GHKP
Sbjct: 429 VSISQDIYSYLIVALCRENRPFAAKNLLERMSKDGHKP 466
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 122/258 (47%), Gaps = 2/258 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G PDIV+YN LI+ YC+ +++ A+ + + M + PD++SYT+++ GL G+
Sbjct: 284 MEEEGFDPDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGR 343
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + M G PD YN I YC +++++ L+ +M+ G+SP++ T +
Sbjct: 344 VREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWV 403
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ S+ NL + G + +L+ R+ + A L M + G
Sbjct: 404 LVEGYGKEGKFLSALNLVVELQRFGVSISQDIYSYLIVALCRENRPFAAKNLLERMSKDG 463
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ + + L C + EA +EM++K KP+ ++R + + ++ +
Sbjct: 464 HKPELEIYNELIKSFCQCDCIAEALLLKMEMVDKEIKPNLATYRAVIGCLSRLSRSMEGE 523
Query: 241 NLSNKMALFGPSMIPKRE 258
+L +M G M+P E
Sbjct: 524 SLVGEMVASG--MLPDLE 539
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 110/247 (44%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G P +++ N L++ K ++ +++ E+M I+P++ ++ + L G
Sbjct: 214 MLRVGFVPTVITSNYLLNGLLKLNYTDRCWEVYEEMERFGIAPNLYTFNILTHVLCKDGD 273
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
K L++M+E G PD YN I +YC RL DA L M +G+ P+ +Y
Sbjct: 274 TGKVNKFLEKMEEEGFDPDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTA 333
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+R + L+ RM+ G P+ + L+ ++ K++ + L +DM+ G
Sbjct: 334 LMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNG 393
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
VL + GK + A +E+ G SQ + + + N+ A +
Sbjct: 394 ISPDSFTCWVLVEGYGKEGKFLSALNLVVELQRFGVSISQDIYSYLIVALCRENRPFAAK 453
Query: 241 NLSNKMA 247
NL +M+
Sbjct: 454 NLLERMS 460
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 94/214 (43%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
D V ++ L+ Y + +V + + +M P VI+ ++ GL + D+ +V
Sbjct: 187 DPVVFDMLVKAYLRMGRVREGLRSFRRMLRVGFVPTVITSNYLLNGLLKLNYTDRCWEVY 246
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
+EM+ +G P+ +N C + +++M E+G P+ TYN +
Sbjct: 247 EEMERFGIAPNLYTFNILTHVLCKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLINSYCRK 306
Query: 129 NDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVS 188
L ++ LY M G +P+ S L+ ++ +V A QL++ MV +G I+
Sbjct: 307 GRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTY 366
Query: 189 DVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
+ L C GK+ E+ +MI G P +
Sbjct: 367 NTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFT 400
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 80/188 (42%), Gaps = 35/188 (18%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ PDIV+YN LI YCK+ +++++ ++ M ISPD + ++ G G G+
Sbjct: 354 MVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGK 413
Query: 61 -----------------------------------PDKARDVLKEMKEYGCYPDAAAYNA 85
P A+++L+ M + G P+ YN
Sbjct: 414 FLSALNLVVELQRFGVSISQDIYSYLIVALCRENRPFAAKNLLERMSKDGHKPELEIYNE 473
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
I+++C + +A L EMV+K + PN TY + +L M+ +G
Sbjct: 474 LIKSFCQCDCIAEALLLKMEMVDKEIKPNLATYRAVIGCLSRLSRSMEGESLVGEMVASG 533
Query: 146 CLPNTQSC 153
LP+ + C
Sbjct: 534 MLPDLEIC 541
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 73/162 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G KP++ YN LI +C+ + +A + +M D++I P++ +Y ++IG L + +
Sbjct: 459 MSKDGHKPELEIYNELIKSFCQCDCIAEALLLKMEMVDKEIKPNLATYRAVIGCLSRLSR 518
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ ++ EM G PD A YC + A L+ ++ + ++N
Sbjct: 519 SMEGESLVGEMVASGMLPDLEICRALFYGYCRENDIDKAESLLSFFAKEFQIHDTESFNA 578
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKR 162
R+ D+ S + M+ G LPN +C L R
Sbjct: 579 LIRITSAKGDIARSLEIQDMMLKMGLLPNPLTCNPFAILTSR 620
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 87/226 (38%), Gaps = 26/226 (11%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYK----IVEKMRDEDISPDVISYTSIIGGLGLV 58
++G++P +Y ++ R +A K +VE ++D+ S DV + ++I
Sbjct: 127 DLGLRPSTQNYCIVVHTLAWSRNFSQAMKFLCELVELVKDDLPSEDV--FKNLI------ 178
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
+ C D ++ ++ Y R+R+ M+ G P T
Sbjct: 179 ------------LCTEDCNWDPVVFDMLVKAYLRMGRVREGLRSFRRMLRVGFVPTVITS 226
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMV 177
N N W +Y M G PN + L LCK + ++ + M
Sbjct: 227 NYLLNGLLKLNYTDRCWEVYEEMERFGIAPNLYTFNILTHVLCKDGDTGKVN-KFLEKME 285
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
E+GF I+ + L + C G+L +A + M +G P VS+
Sbjct: 286 EEGFDPDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSY 331
>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 915
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 118/226 (52%), Gaps = 1/226 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+KP+I +Y LID C + EKA +++ +M ++ + P+VI+Y ++I G G
Sbjct: 349 MEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGM 408
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A DV++ M+ P+ YN I+ YC + A G++++M+E+ + P+ TYN
Sbjct: 409 IEDAVDVVELMESRKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNS 467
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
S + S++ L M G +P+ + ++ + ++VE A L++ + +KG
Sbjct: 468 LIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKG 527
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+++ L D C GK+ EA +M+ K P+ ++F +
Sbjct: 528 VNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNAL 573
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 118/233 (50%), Gaps = 1/233 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ PD +Y +ID CK ++VE+A + + + + ++P+V+ YT++I G G+
Sbjct: 488 MNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGK 547
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A +L++M C P++ +NA I C +L++A+ L ++MV+ GL P +T +
Sbjct: 548 VDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTI 607
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
D +++ + +M+ +G P+ + ++ R+ ++ A + M E G
Sbjct: 608 LIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENG 667
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF-RRIKALMEL 232
+ L D+G+ A M + G +PSQ +F IK L+E+
Sbjct: 668 VSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEM 720
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 100/213 (46%), Gaps = 1/213 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E V P+I +YN +++ YCK VE+A + V K+ + + PD +YTS+I G
Sbjct: 209 MLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKD 268
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A V EM GC + AY I C+A+R+ +A L +M + P TY +
Sbjct: 269 LDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTV 328
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ S + NL M TG PN + L+ Q K E A +L M+EKG
Sbjct: 329 LIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKG 388
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIE 213
++ + L + C G ++E +E++E
Sbjct: 389 LMPNVITYNALINGYCKRG-MIEDAVDVVELME 420
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 103/226 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E V PD+V+YN LID C+ + AY+++ M D + PD +YTS+I L +
Sbjct: 453 MLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKR 512
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A D+ +++ G P+ Y A I YC A ++ +A ++++M+ K PN+ T+N
Sbjct: 513 VEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNA 572
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
L+ + L +M+ G P + L+ + + A + M+ G
Sbjct: 573 LIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSG 632
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
C G+L++AE +M E G P ++ +
Sbjct: 633 TKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSL 678
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 105/258 (40%), Gaps = 36/258 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+ P++++YN LI+ YCK +E A +VE M +SP+ +Y +I G
Sbjct: 384 MLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGY-CKSN 442
Query: 61 PDKARDVLKEMKEYGCYPDAAAYN-----------------------------------A 85
KA VL +M E PD YN +
Sbjct: 443 VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTS 502
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
I + C +KR+ +A L D + +KG++PN Y + + + + + +M+
Sbjct: 503 MIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKN 562
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
CLPN+ + L+ K++ A L MV+ G + +L L G A
Sbjct: 563 CLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAY 622
Query: 206 KSFLEMIEKGHKPSQVSF 223
F +M+ G KP ++
Sbjct: 623 SRFQQMLSSGTKPDAHTY 640
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 118/307 (38%), Gaps = 89/307 (28%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVG- 59
+ + GV P++V Y LID YCK +V++A+ ++EKM ++ P+ +++ ++I GL G
Sbjct: 523 LEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGK 582
Query: 60 ----------------QP------------------DKARDVLKEMKEYGCYPDAAAYNA 85
QP D A ++M G PDA Y
Sbjct: 583 LKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTT 642
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
I+ YC RL DA +M +M E G+SP+ TY+ + + ++++ RM TG
Sbjct: 643 FIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTG 702
Query: 146 CLPNTQSCMFLVK----------------LCKRQEKVEI--ALQLWNDMVE--------- 178
C P+ + + L+K LC +E ++L MVE
Sbjct: 703 CEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKS 762
Query: 179 ---------------------------KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEM 211
+G LV + L C + K EA K +M
Sbjct: 763 YEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDM 822
Query: 212 IEKGHKP 218
I GH P
Sbjct: 823 ICVGHLP 829
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 116/269 (43%), Gaps = 57/269 (21%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G KPD +Y I YC++ ++ A ++ KMR+ +SPD+ +Y+S+I G G +GQ
Sbjct: 628 MLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQ 687
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASG------------------L 102
+ A DVLK M++ GC P + + I++ K + L
Sbjct: 688 TNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVEL 747
Query: 103 MDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLY-----------------------C 139
+++MVE ++PNA +Y +LR + ++ C
Sbjct: 748 LEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCC 807
Query: 140 R-------------MMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ M+ G LP +SC L+ L K+ EK E ++ ++++ G+
Sbjct: 808 KLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEK-ERGTSVFQNLLQCGYYEDE 866
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEK 214
L ++ D + G LVEA ++EK
Sbjct: 867 LAWKIIIDGVGKQG-LVEAFYELFNVMEK 894
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/157 (21%), Positives = 70/157 (44%), Gaps = 1/157 (0%)
Query: 25 QVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEM-KEYGCYPDAAAY 83
+ + +++EKM + ++P+ SY +I G+ VG A V M + G P +
Sbjct: 740 EFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVF 799
Query: 84 NAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMG 143
NA + C K+ +A+ ++D+M+ G P + + Y + +++ ++
Sbjct: 800 NALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQ 859
Query: 144 TGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
G + + ++ +Q VE +L+N M + G
Sbjct: 860 CGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNG 896
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 53/121 (43%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
R G+ P + +N L+ CK ++ +A K+V+ M P + S +I GL G+
Sbjct: 788 RNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEK 847
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
++ V + + + G Y D A+ I + L + M + G ++ TY+L
Sbjct: 848 ERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLL 907
Query: 122 F 122
Sbjct: 908 I 908
>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
Length = 801
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 115/242 (47%), Gaps = 16/242 (6%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD +Y+ +I C +VEKA+ + ++M+ ++PDV +YT +I G
Sbjct: 279 MMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGL 338
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A+ + +EM+ GC P Y A I Y AK++ A+ + MV+ G PN TY
Sbjct: 339 IEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGA 398
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTG----------------CLPNTQSCMFLVKLCKRQE 164
+ ++ ++ +Y +++GT PN + LV +
Sbjct: 399 LVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAH 458
Query: 165 KVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
KV+ A +L + M+ G +V D L D C GK+ A++ FL+M + G+ PS ++
Sbjct: 459 KVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYT 518
Query: 225 RI 226
+
Sbjct: 519 SL 520
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 122/268 (45%), Gaps = 16/268 (5%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR +G P +V+Y LI Y K +QV +A I +M D P+ ++Y +++ GL G
Sbjct: 349 MRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGN 408
Query: 61 PDKARDVLKEM----------------KEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMD 104
KA +V ++ + P+ Y A + C A ++ A L+D
Sbjct: 409 ISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLD 468
Query: 105 EMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQE 164
M+ G PN Y+ F + + S+ ++ +M G LP+ + L+ +
Sbjct: 469 AMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDG 528
Query: 165 KVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
++++A+++ + M++ ++ + D LC +G+ +A K M EKG P+ V++
Sbjct: 529 RLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYT 588
Query: 225 RIKALMELANKQEALQNLSNKMALFGPS 252
+ + A K + +L +M+ G S
Sbjct: 589 ALIDGLGKAGKIDLSLDLFTQMSRKGCS 616
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 112/240 (46%), Gaps = 16/240 (6%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKM------RDED----------ISPD 44
M + G +P+ V+Y L+D CK + KA+++ K+ D D ++P+
Sbjct: 384 MVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPN 443
Query: 45 VISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMD 104
V++Y +++ GL + D A ++L M GC P+ Y+A I +C A ++ A +
Sbjct: 444 VVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFL 503
Query: 105 EMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQE 164
+M + G P+ TY + L + + +M+ C PN + ++ R
Sbjct: 504 QMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIG 563
Query: 165 KVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
+ E AL+L + M EKG ++ L D L GK+ + F +M KG P+ V++R
Sbjct: 564 ESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYR 623
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 123/277 (44%), Gaps = 38/277 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G P + +Y LID KD +++ A K++ +M + +P+V++YT++I GL +G+
Sbjct: 505 MTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGE 564
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA +L M+E GC P+ Y A I A ++ + L +M KG SPN TY +
Sbjct: 565 SEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRV 624
Query: 121 FF-------------------RVFYW--------------SNDLRSSWNLYCRMMGTGCL 147
+ YW S +S + M G +
Sbjct: 625 LINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTV 684
Query: 148 PNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDV---LFDLLCDMGKLVEA 204
P L+ + ++EIA++L +M+E S +D+ L LC ++ EA
Sbjct: 685 PIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVP-SSVKTDNDMYASLIQALCLASQVEEA 743
Query: 205 EKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEALQ 240
+ + EM +G P F IK L+E+ EALQ
Sbjct: 744 FRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQ 780
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 94/206 (45%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ P++V+Y L+D CK +V+ A+++++ M P+ I Y ++I G G+ D A+
Sbjct: 440 LAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQ 499
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+V +M + G P Y + I RL A ++ +M++ +PN TY
Sbjct: 500 EVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGL 559
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ + L M GC PN + L+ + K++++L L+ M KG
Sbjct: 560 CRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNY 619
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEM 211
+ VL + LC G L +A EM
Sbjct: 620 VTYRVLINHLCAAGLLDKARLLLGEM 645
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 110/259 (42%), Gaps = 15/259 (5%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G D + C CK+ + A ++E+ ED D + T +I GL
Sbjct: 66 MSESGFCMDRFTVGCFAHALCKEGRWADALDMIER---EDFKLDTVLCTHMISGLMEASY 122
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A L M+ C P+ Y + + K+L +++ M+ +G +PN + +N
Sbjct: 123 FDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNS 182
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPN-TQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ D ++ L RM GC P +F+ +C QEK+ L D+ EK
Sbjct: 183 LVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICG-QEKLPSPDLL--DLAEK 239
Query: 180 GFGSYILVSDVLFDL--------LCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALME 231
+G + + VL + LC +GK +A + EM+ KG P ++ ++ +
Sbjct: 240 IYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLC 299
Query: 232 LANKQEALQNLSNKMALFG 250
A K E L +M + G
Sbjct: 300 HATKVEKAFLLFQEMKMVG 318
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 93/243 (38%), Gaps = 70/243 (28%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P++V+Y +ID C+ + EKA K++ M ++ SP+V++YT++I GLG G+ D + D+
Sbjct: 547 PNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDL 606
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDAS--------------------------- 100
+M GC P+ Y I + C A L A
Sbjct: 607 FTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSK 666
Query: 101 ------GLMDEMVEKGLSPNATTYNLFFRVFYWS-----------------------NDL 131
G+++EM G P A Y + F + ND+
Sbjct: 667 SFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDM 726
Query: 132 RSS--------------WNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
+S + LY M G +P + L+K +K + ALQL +
Sbjct: 727 YASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGIC 786
Query: 178 EKG 180
+G
Sbjct: 787 HEG 789
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 98/249 (39%), Gaps = 11/249 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P+ +N L+ YC ++ AYK++ +M P + Y IG + GQ
Sbjct: 168 MMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSI--CGQ 225
Query: 61 P--------DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLS 112
D A + EM C + R C + A L+ EM+ KG
Sbjct: 226 EKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFV 285
Query: 113 PNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQL 172
P+ +TY+ + + ++ L+ M G P+ + L+ + +E A L
Sbjct: 286 PDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWL 345
Query: 173 WNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALME 231
+ +M G ++ L ++ +A F M++ G +P+ V++ + L +
Sbjct: 346 FEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCK 405
Query: 232 LANKQEALQ 240
N +A +
Sbjct: 406 AGNISKAFE 414
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 83/203 (40%), Gaps = 6/203 (2%)
Query: 27 EKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAA 86
++A + +MR P+V++Y +++ G Q + ++ M GC P+ + +N+
Sbjct: 124 DEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSL 183
Query: 87 IRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRS------SWNLYCR 140
+ +YC K A L++ M G P YN+F L S + +Y
Sbjct: 184 VHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGE 243
Query: 141 MMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGK 200
M+ C+ N + + K + A QL +M+ KGF + LC K
Sbjct: 244 MLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATK 303
Query: 201 LVEAEKSFLEMIEKGHKPSQVSF 223
+ +A F EM G P ++
Sbjct: 304 VEKAFLLFQEMKMVGVTPDVYTY 326
>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 118/227 (51%), Gaps = 2/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G+KP++ +YN +I + CK +V+ A +++ +M ++ I PD + YT++I G +G
Sbjct: 36 MQMKGLKPNLYTYNSIILLLCKSGKVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGN 95
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A + EM++ PD AY A I C ++ +A + ++M +G+ P+ TY
Sbjct: 96 IQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTT 155
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+ S ++ +++L+ +M+ +G PN + L LCK + V+ A +L ++M K
Sbjct: 156 LIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQ-VDTANELLHEMCGK 214
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G I + L + LC G + +A K EM G P ++F +
Sbjct: 215 GLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTL 261
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 98/177 (55%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G++ +I +YN L++ CK + +A K++E+M + PD I++T+++ G+ KA
Sbjct: 215 GLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKA 274
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++L+EM + G P +N + +C++ L D L+ M+EKG+ PN TTYN +
Sbjct: 275 HELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQ 334
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
+ N++R + +Y M G +P++ + L+K + ++ A L +M EKGF
Sbjct: 335 YCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGF 391
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 110/254 (43%), Gaps = 35/254 (13%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV+PD V+Y LID YCK ++EKA+ + +M ++P+V++YT++ GL +GQ D A
Sbjct: 145 GVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTA 204
Query: 65 RDVL-----------------------------------KEMKEYGCYPDAAAYNAAIRN 89
++L +EM+ G YPD + +
Sbjct: 205 NELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDA 264
Query: 90 YCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPN 149
YC + A L+ EM+++GL P T+N+ F S L L M+ G +PN
Sbjct: 265 YCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPN 324
Query: 150 TQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFL 209
T + L+K + + +++ M +G ++L C + EA
Sbjct: 325 TTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHK 384
Query: 210 EMIEKGHKPSQVSF 223
EM EKG + S+
Sbjct: 385 EMAEKGFNLTASSY 398
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 128/267 (47%), Gaps = 4/267 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G PD+VSY+ +I+ YC +++K K++++M+ + + P++ +Y SII L G+
Sbjct: 1 MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A VL+EM G PD Y I +C ++ A L DEM ++ + P+ Y
Sbjct: 61 VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + ++ +M G P+ + L+ + ++E A L N MV+ G
Sbjct: 121 VICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSG 180
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
++ L D LC +G++ A + EM KG + + ++ + L + N ++A+
Sbjct: 181 LTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAV 240
Query: 240 QNLSNKMALFGPSMIPKREEYLAEMSA 266
+ L +M + G M P + M A
Sbjct: 241 K-LMEEMEVAG--MYPDTITFTTLMDA 264
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 111/227 (48%), Gaps = 2/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + + PD ++Y +I C+ ++ +A K+ KM + PD ++YT++I G G+
Sbjct: 106 MEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGE 165
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA + +M + G P+ Y A C ++ A+ L+ EM KGL N TYN
Sbjct: 166 MEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNS 225
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEK 179
S ++R + L M G P+T + L+ CK E V+ A +L +M+++
Sbjct: 226 LVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVK-AHELLREMLDR 284
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G ++ +VL + C G L + E+ M+EKG P+ ++ +
Sbjct: 285 GLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSL 331
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 78/145 (53%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ PD +++ L+D YCK ++ KA++++ +M D + P VI++ ++ G + G
Sbjct: 246 MEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGM 305
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ +L M E G P+ YN+ ++ YCI +R + + M +G+ P++ TYN+
Sbjct: 306 LEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNI 365
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTG 145
+ + +++ +W L+ M G
Sbjct: 366 LIKGHCKARNMKEAWFLHKEMAEKG 390
>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
Length = 817
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 109/215 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ GVKPD+V+Y +I C+ +++ A + +M D+ ++PD +Y +I G G
Sbjct: 423 MRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGS 482
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA++++ E+ G + D +++ I N C R+ DA + D V GL P+A YN+
Sbjct: 483 LLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNM 542
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + ++ M+ G PN LV + +++ L L+ +M+++G
Sbjct: 543 LMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRG 602
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
++ ++ D L + G+ V A+ F EM E G
Sbjct: 603 IKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESG 637
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 116/223 (52%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ PD+V+YN ++ CK R ++KA + +M ++ + P+ +Y ++I G GQ
Sbjct: 248 MVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQ 307
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A V KEM+ + PD + + + C ++++A + D M KG +P+ +YN+
Sbjct: 308 WKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNI 367
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L +L+ M+G G P+ + L+K ++ A+ ++N+M + G
Sbjct: 368 MLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHG 427
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + LC +GK+ +A + F +MI++G P + ++
Sbjct: 428 VKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAY 470
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 105/224 (46%), Gaps = 4/224 (1%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDI--SPDVISYTSIIGGLGLVGQ 60
E+G PD+ SY+ L+ C + +A ++ M + SP+V++Y ++I G G
Sbjct: 178 ELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGD 237
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA D+ KEM + G PD YN+ + C A+ + A + +MV K + PN TYN
Sbjct: 238 VNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNN 297
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ + + + ++ M LP+ + M + LCK K++ A +++ M K
Sbjct: 298 LIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCK-YGKIKEARDVFDTMAMK 356
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G + +++ + G LV+ F M+ G P +F
Sbjct: 357 GQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTF 400
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 104/237 (43%), Gaps = 2/237 (0%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
+G+ PD V YN L+D YC ++EKA ++ + M I P+V+ Y +++ G +G+ D+
Sbjct: 531 VGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDE 590
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
+ +EM + G P Y+ I A R A EM E G++ + TYN+ R
Sbjct: 591 GLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLR 650
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
+ + + L+ + N + ++ + +VE A L+ +
Sbjct: 651 GLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVP 710
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
++ ++ L G + EAE F M G +P+ + + EL K E ++
Sbjct: 711 SVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHV--VRELLKKNEIVR 765
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 108/259 (41%), Gaps = 37/259 (14%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGL--- 57
MR + PD+V+ + L+ CK ++++A + + M + +PDV SY ++ G
Sbjct: 318 MRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGC 377
Query: 58 --------------------------------VGQPDKARDVLKEMKEYGCYPDAAAYNA 85
G DKA + EM+++G PD Y
Sbjct: 378 LVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRT 437
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
I C ++ DA ++M+++G++P+ YN + F L + L +M G
Sbjct: 438 VIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNG 497
Query: 146 C-LPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEA 204
L + LCK +V A +++ V G +V ++L D C +GK+ +A
Sbjct: 498 MHLDIVFFSSIINNLCKLG-RVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKA 556
Query: 205 EKSFLEMIEKGHKPSQVSF 223
+ F M+ G +P+ V +
Sbjct: 557 LRVFDAMVSAGIEPNVVGY 575
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 92/234 (39%), Gaps = 35/234 (14%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G++P++V Y L++ YCK ++++ + +M I P I Y+ II GL G+
Sbjct: 563 MVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGR 622
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIR----NYCI------------------------ 92
A+ EM E G D YN +R N C
Sbjct: 623 TVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNT 682
Query: 93 -------AKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
+R+ +A L + L P+ TY++ + + +++ M G
Sbjct: 683 MIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAG 742
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMG 199
C PN++ +V+ ++ ++ A + + E+ F L + +L DL G
Sbjct: 743 CEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKG 796
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/224 (19%), Positives = 83/224 (37%), Gaps = 38/224 (16%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ P +Y L+D + + E A ++ + ++I ++ G + D+A
Sbjct: 110 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 169
Query: 66 DVL-KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGL--SPNATTYNLFF 122
D+L E GC PD +Y+ +++ C + A L+ M E G SPN YN
Sbjct: 170 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVI 229
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
F+ D V A L+ +MV++G
Sbjct: 230 DGFFKEGD-----------------------------------VNKACDLFKEMVQRGIP 254
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ + + LC + +AE +M+ K P+ ++ +
Sbjct: 255 PDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNL 298
>gi|356523145|ref|XP_003530202.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial-like [Glycine max]
Length = 529
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 114/223 (51%), Gaps = 1/223 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P++VS N L+ CK +V+ A +++++M + P+V+SY++++GG G + A V
Sbjct: 184 PNVVSCNILLKALCKRNEVDVAVRVLDEMSLMGLVPNVVSYSTVLGGFVFKGDMESAMRV 243
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
E+ + G PD +Y + +C +L DA +MD M E + P+ TY + +
Sbjct: 244 FGEILDKGWMPDVTSYTVLMSGFCRLGKLVDAIRMMDLMEENRVQPSEVTYGVMIEAYCK 303
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ NL M+ G +P++ C +V L + VE A ++W +V KG+ V
Sbjct: 304 GRKPGEAVNLLEDMVEKGLVPSSVLCCKVVDLLCEEGSVERACEVWRGVVRKGWRVGGAV 363
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALM 230
+ LC GK+VEA + L+ +EKG S +++ + A M
Sbjct: 364 VSTIVHWLCKEGKVVEA-RGVLDELEKGEVASLMTYNTLIAGM 405
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 121/254 (47%), Gaps = 24/254 (9%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M MG+ P++VSY+ ++ + +E A ++ ++ D+ PDV SYT ++ G +G+
Sbjct: 212 MSLMGLVPNVVSYSTVLGGFVFKGDMESAMRVFGEILDKGWMPDVTSYTVLMSGFCRLGK 271
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A ++ M+E P Y I YC ++ +A L+++MVEKGL P++
Sbjct: 272 LVDAIRMMDLMEENRVQPSEVTYGVMIEAYCKGRKPGEAVNLLEDMVEKGLVPSSVLCCK 331
Query: 121 FFRVF-----------YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIA 169
+ W +R W + ++ T + LCK + VE
Sbjct: 332 VVDLLCEEGSVERACEVWRGVVRKGWRVGGAVVST----------IVHWLCKEGKVVEAR 381
Query: 170 LQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI-KA 228
L D +EKG + ++ + L +C+ G+L EA + + EM+EKG P+ ++ + K
Sbjct: 382 GVL--DELEKGEVASLMTYNTLIAGMCERGQLCEAGRLWDEMVEKGRVPNAFTYNVLMKG 439
Query: 229 LMELANKQEALQNL 242
++ + +EA++ L
Sbjct: 440 FCKVGDVKEAIRVL 453
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 84/192 (43%), Gaps = 36/192 (18%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVI-------------- 46
M E V+P V+Y +I+ YCK R+ +A ++E M ++ + P +
Sbjct: 282 MEENRVQPSEVTYGVMIEAYCKGRKPGEAVNLLEDMVEKGLVPSSVLCCKVVDLLCEEGS 341
Query: 47 ---------------------SYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNA 85
++I+ L G+ +AR VL E+ E G YN
Sbjct: 342 VERACEVWRGVVRKGWRVGGAVVSTIVHWLCKEGKVVEARGVLDEL-EKGEVASLMTYNT 400
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
I C +L +A L DEMVEKG PNA TYN+ + F D++ + + M+ +G
Sbjct: 401 LIAGMCERGQLCEAGRLWDEMVEKGRVPNAFTYNVLMKGFCKVGDVKEAIRVLEEMVESG 460
Query: 146 CLPNTQSCMFLV 157
CLPN + LV
Sbjct: 461 CLPNKSTFSILV 472
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 70/159 (44%), Gaps = 1/159 (0%)
Query: 64 ARDVLKEMKE-YGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
A V K E + P+ + N ++ C + A ++DEM GL PN +Y+
Sbjct: 169 AHSVFKSSTEKFRLVPNVVSCNILLKALCKRNEVDVAVRVLDEMSLMGLVPNVVSYSTVL 228
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
F + D+ S+ ++ ++ G +P+ S L+ R K+ A+++ + M E
Sbjct: 229 GGFVFKGDMESAMRVFGEILDKGWMPDVTSYTVLMSGFCRLGKLVDAIRMMDLMEENRVQ 288
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQV 221
+ V+ + C K EA +M+EKG PS V
Sbjct: 289 PSEVTYGVMIEAYCKGRKPGEAVNLLEDMVEKGLVPSSV 327
Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 35/59 (59%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVG 59
M E G P+ +YN L+ +CK V++A +++E+M + P+ +++ ++ G+ L G
Sbjct: 421 MVEKGRVPNAFTYNVLMKGFCKVGDVKEAIRVLEEMVESGCLPNKSTFSILVDGISLSG 479
>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
Length = 1041
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 122/244 (50%), Gaps = 1/244 (0%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E G+ PD+ +YN +I +CK + KA+++ E M + ISP++I+Y ++I GL G+ +
Sbjct: 649 EKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIE 708
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
+AR++ + G +A Y I YC + L A L DEM KG+ P++ Y+
Sbjct: 709 RARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALI 768
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
+ + +L+ + G + + CK + +E A QL DMV+K
Sbjct: 769 DGCRKEGNTEKALSLFLESVQKGFASTSSLNALMDGFCKSGKVIE-ANQLLEDMVDKHVK 827
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNL 242
+ +L D C G L EAE+ F++M ++ P+ +++ + + +A ++ + L
Sbjct: 828 PDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFAL 887
Query: 243 SNKM 246
++M
Sbjct: 888 FDEM 891
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 114/254 (44%), Gaps = 36/254 (14%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ P+ V LID YCK+ +A I M + PDV +Y+++I GL G+ A
Sbjct: 581 GIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGA 640
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR- 123
++L E E G PD YN+ I +C + A L + M +KG+SPN TYN
Sbjct: 641 MELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALING 700
Query: 124 --------------------------VFYW--------SNDLRSSWNLYCRMMGTGCLPN 149
V Y S +L ++ L+ M G P+
Sbjct: 701 LCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPD 760
Query: 150 TQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFL 209
+ L+ C+++ E AL L+ + V+KGF S + + L D C GK++EA +
Sbjct: 761 SFVYSALIDGCRKEGNTEKALSLFLESVQKGFASTSSL-NALMDGFCKSGKVIEANQLLE 819
Query: 210 EMIEKGHKPSQVSF 223
+M++K KP V++
Sbjct: 820 DMVDKHVKPDHVTY 833
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 112/226 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +GVKP+ V Y LI + ++ + ++A +I++ M + + PDV+ Y S+I GL +
Sbjct: 472 MVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRK 531
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A+D L EM E G P+ Y A I YC + ++ A EM+ G++PN
Sbjct: 532 MEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTA 591
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + +++ M+G P+ ++ L+ R K++ A++L ++ +EKG
Sbjct: 592 LIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKG 651
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + + C G + +A + M +KG P+ +++ +
Sbjct: 652 LVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNAL 697
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 113/241 (46%), Gaps = 3/241 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+KP++ +Y LI YCK +++ A + ++M I+P+ + T++I G G
Sbjct: 542 MIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGS 601
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + + M +PD Y+A I +L+ A L+ E +EKGL P+ TYN
Sbjct: 602 TTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNS 661
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
F + ++ L+ M G PN + L+ LCK E +E A +L++ + K
Sbjct: 662 IISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGE-IERARELFDGIPGK 720
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEA 238
G + + D C G L +A + F EM KG P + I + N ++A
Sbjct: 721 GLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKA 780
Query: 239 L 239
L
Sbjct: 781 L 781
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 105/227 (46%), Gaps = 2/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ + P + +I+ C+ +E A ++ E M + P+ + YT++I G G+
Sbjct: 437 MKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGR 496
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A +LK M + G PD YN+ I C ++++ +A + EM+E+GL PN TY
Sbjct: 497 FQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGA 556
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+ S +++ + + M+G G PN C L+ CK E A ++ M+ +
Sbjct: 557 LIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTE-ATSIFRCMLGR 615
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ L L GKL A + E +EKG P ++ I
Sbjct: 616 SVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSI 662
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 105/226 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV+PD++ YN +I CK R++E+A + +M + + P+V +Y ++I G G+
Sbjct: 507 MDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGE 566
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A KEM G P+ A I YC +A+ + M+ + + P+ TY+
Sbjct: 567 MQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSA 626
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L+ + L + G +P+ + ++ +Q + A QL M +KG
Sbjct: 627 LIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKG 686
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
I+ + L + LC G++ A + F + KG + V++ I
Sbjct: 687 ISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATI 732
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 104/223 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+KP V+Y LID + + +A+++ E+M + ++ +Y +++ G+ G
Sbjct: 332 MFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGD 391
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA +L EM G PD YN I Y + L+ EM + L P A T +
Sbjct: 392 MEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGM 451
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + ++ M+ G PN L+K ++ + + A+++ M +KG
Sbjct: 452 IINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKG 511
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+L + + LC K+ EA+ +EMIE+G KP+ ++
Sbjct: 512 VQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTY 554
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 117/243 (48%), Gaps = 1/243 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G P +V+YN +I C+ +V++A+++ + M + + DV +Y+ +I G G +
Sbjct: 262 MEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKR 321
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A+ +L+EM G P AY A I + +A + +EM+ +G+ N TYN
Sbjct: 322 CTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNA 381
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ D+ + L M+ G P+TQ+ +++ +++ L ++M +
Sbjct: 382 LVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSN 441
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
++ + LC G + +A + F M+ G KP+ V + IK ++ QEA+
Sbjct: 442 LVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAV 501
Query: 240 QNL 242
+ L
Sbjct: 502 RIL 504
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 103/226 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ D+ +Y+ LID + K ++ +A ++E+M + + P ++YT++I G G
Sbjct: 297 MDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGD 356
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A V +EM G + YNA ++ C + A L++EM+ G+ P+ TYN
Sbjct: 357 SGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNN 416
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + +L M + +P +C ++ R +E A +++ MV G
Sbjct: 417 MIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLG 476
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ L G+ EA + M +KG +P + + +
Sbjct: 477 VKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSV 522
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 89/201 (44%)
Query: 12 SYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEM 71
S N L+D +CK +V +A +++E M D+ + PD ++YT +I G +A +M
Sbjct: 797 SLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDM 856
Query: 72 KEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDL 131
++ P+A Y A + Y +A R + L DEM+ K + P+ T+++ D
Sbjct: 857 QKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDH 916
Query: 132 RSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVL 191
+ L M+ G + C L+ R+E V L++ + E+G + L
Sbjct: 917 VKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSLATCSTL 976
Query: 192 FDLLCDMGKLVEAEKSFLEMI 212
GK+ A + M+
Sbjct: 977 VRCFHKAGKMDGAARVLKSMV 997
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 116/280 (41%), Gaps = 36/280 (12%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ + V+Y +ID YCK + KA+++ ++M + + PD Y+++I G G +KA
Sbjct: 721 GLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKA 780
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ E + G + ++ NA + +C + ++ +A+ L+++MV+K + P+ TY +
Sbjct: 781 LSLFLESVQKG-FASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDY 839
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK----LCKRQEKVEI------------ 168
+ L+ + + M +PN + L+ +R E +
Sbjct: 840 HCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPD 899
Query: 169 -------------------ALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFL 209
L+L +DM++KG V VL D LC + E K
Sbjct: 900 GVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEVLKVLE 959
Query: 210 EMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALF 249
++ E+G S + + A K + + M F
Sbjct: 960 KIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKSMVRF 999
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 89/213 (41%)
Query: 14 NCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKE 73
N L+ K ++E ++ M + ++ DV +YT +I G + + +L EM+E
Sbjct: 205 NGLLSDLLKANKLELFWRFYNGMLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEE 264
Query: 74 YGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRS 133
GC P YN I C A + +A L M +KGL + TY++ F
Sbjct: 265 KGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTE 324
Query: 134 SWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFD 193
+ + M G P + L+ RQ A ++ +M+ +G + + L
Sbjct: 325 AKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVK 384
Query: 194 LLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+C G + +A+ EMI G KP ++ +
Sbjct: 385 GVCKFGDMEKADALLNEMIMVGIKPDTQTYNNM 417
Score = 40.8 bits (94), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 80/191 (41%), Gaps = 4/191 (2%)
Query: 71 MKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSND 130
M E D Y I + A ++ L+ EM EKG SP+ TYN+ + +
Sbjct: 227 MLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGE 286
Query: 131 LRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDV 190
+ ++ L M G + + + L+ +Q++ A + +M KG +
Sbjct: 287 VDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTA 346
Query: 191 LFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLSNKMALF 249
L D G EA + EM+ +G K + ++ +K + + + ++A L N+M +
Sbjct: 347 LIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKA-DALLNEMIMV 405
Query: 250 GPSMIPKREEY 260
G + P + Y
Sbjct: 406 G--IKPDTQTY 414
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 51/269 (18%), Positives = 95/269 (35%), Gaps = 31/269 (11%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKM-------------------RDEDISP 43
+MG + S++ L + C R +A +V +M ++ D++
Sbjct: 94 QMGFSQKLQSFSILALILCNSRLFSRADSVVNQMIMMSSGGYSEILDSLIKSCKEFDLNN 153
Query: 44 DV-----------ISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCI 92
+ + +I G G D+A K G N + +
Sbjct: 154 VNGNENSNNNDRGVVFELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLK 213
Query: 93 AKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS 152
A +L + M+E + + TY + + + + L M GC P+ +
Sbjct: 214 ANKLELFWRFYNGMLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVT 273
Query: 153 CMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMI 212
++ R +V+ A +L M +KG + + +L D + EA+ EM
Sbjct: 274 YNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMF 333
Query: 213 EKGHKPSQVSFRR-IKALMELANKQEALQ 240
KG KP V++ I M + EA +
Sbjct: 334 SKGLKPGHVAYTALIDGFMRQGDSGEAFR 362
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 38/74 (51%)
Query: 14 NCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKE 73
+ LID C+ V + K++EK+ ++ ++ + + ++++ G+ D A VLK M
Sbjct: 939 HVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKSMVR 998
Query: 74 YGCYPDAAAYNAAI 87
+ PD+ N I
Sbjct: 999 FKWVPDSTELNDLI 1012
>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
Length = 778
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 109/220 (49%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
R+ G D VSY LI Y KD V++A K+ ++M++++I P ++Y IIGGL G+
Sbjct: 480 RKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKT 539
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
++A L E+ E G PD YN + YC + A ++MVE P+ T N+
Sbjct: 540 EQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNIL 599
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
R L + L+ + G +T + L+ ++ +++ A L ++M EK
Sbjct: 600 LRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKEL 659
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQV 221
G + + L D G++ EAE+ +M+EKG P QV
Sbjct: 660 GPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQV 699
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 115/241 (47%), Gaps = 1/241 (0%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
++G+ P++ ++N +I YC + + + A + + M + SPD ++Y +I+ L G+
Sbjct: 201 KLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLG 260
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
ARD+L +MK G P+ YN + YC L++A+ +++ M + L P+ TYN+
Sbjct: 261 DARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLI 320
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
+ ++ L M LP+ S L+ C K+ A +L +M EKG
Sbjct: 321 NGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVK 380
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQN 241
+ +++ C GK+ +A + +M E G P V++ I + N EA +
Sbjct: 381 PNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRT 440
Query: 242 L 242
+
Sbjct: 441 M 441
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 119/247 (48%), Gaps = 4/247 (1%)
Query: 1 MREMG---VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGL 57
M EMG +K D V+ N ++ C+++++E+AYK++ R D +SY ++I G
Sbjct: 441 MDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFK 500
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
G D+A + EMKE P YN I C + A ++E++E GL P+ TT
Sbjct: 501 DGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETT 560
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
YN + D+ ++ + +M+ P+ +C L++ + +E AL+L+N V
Sbjct: 561 YNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWV 620
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQ 236
KG + + L LC G+L +A EM EK P ++ I AL + +
Sbjct: 621 SKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIR 680
Query: 237 EALQNLS 243
EA + +S
Sbjct: 681 EAEEFMS 687
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 107/261 (40%), Gaps = 35/261 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E GVKP+ V++N ++ YCK+ +++ A + KM + SPD ++Y ++I G G
Sbjct: 374 MSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGN 433
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLM----------------- 103
+A + EM D+ N +R C K+L +A L+
Sbjct: 434 MGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGT 493
Query: 104 ------------------DEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
DEM EK + P+ TYN + + ++ +G
Sbjct: 494 LIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESG 553
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
LP+ + ++ R+ VE A Q N MVE F + ++L LC G L +A
Sbjct: 554 LLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKAL 613
Query: 206 KSFLEMIEKGHKPSQVSFRRI 226
K F + KG V++ +
Sbjct: 614 KLFNTWVSKGKAIDTVTYNTL 634
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 109/224 (48%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G+ P+ +YN L+ YCK +++A ++E M ++ PDV +Y +I GL G+
Sbjct: 269 MKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGR 328
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A + EM+ PD +YN I ++ +A L++EM EKG+ PNA T+N+
Sbjct: 329 IEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNI 388
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+ + + + N +M +G P+ + L+ CK E A + ++M K
Sbjct: 389 MVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGE-AFRTMDEMGRK 447
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + + LC KL EA K ++G+ +VS+
Sbjct: 448 NMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSY 491
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 100/227 (44%), Gaps = 2/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + PD V+YN ++D CK ++ A ++ M+ + P+ +Y ++ G +G
Sbjct: 234 MGKYNCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGW 293
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A +V++ M + PD YN I C R+ +A L DEM L P+ +YN
Sbjct: 294 LKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNT 353
Query: 121 FFR-VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
WS + ++ L M G PN + +VK ++ K++ A M E
Sbjct: 354 LINGCLEWSK-ISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEES 412
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
GF + + L + C G + EA ++ EM K K V+ I
Sbjct: 413 GFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTI 459
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 72/183 (39%), Gaps = 35/183 (19%)
Query: 1 MREMGVKPDIVSYNCLI-----------------------------------DVYCKDRQ 25
M+E + P V+YNC+I YC++
Sbjct: 514 MKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGD 573
Query: 26 VEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNA 85
VEKA++ KM + PDV + ++ GL + G +KA + G D YN
Sbjct: 574 VEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNT 633
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
I + C RL DA L+ EM EK L P+ TYN S +R + +M+ G
Sbjct: 634 LITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKG 693
Query: 146 CLP 148
LP
Sbjct: 694 XLP 696
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 98/230 (42%), Gaps = 8/230 (3%)
Query: 17 IDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK-----ARDVLKEM 71
I Y + Q A++I +KM+ + P++++ +++ L V P +R+ +
Sbjct: 142 IGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSL--VRYPSSHSVSFSREAFNDA 199
Query: 72 KEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDL 131
+ G P+ +N I YC+ + +DA ++ M + SP+ TYN L
Sbjct: 200 IKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRL 259
Query: 132 RSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVL 191
+ +L M G LPN + LV + ++ A + M + + ++L
Sbjct: 260 GDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNML 319
Query: 192 FDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQ 240
+ LC+ G++ EA K EM P VS+ I +E + EA +
Sbjct: 320 INGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFK 369
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 65/137 (47%), Gaps = 23/137 (16%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G D V+YN LI CK+ +++ A+ ++ +M ++++ PD +Y +II L G+ +A
Sbjct: 623 GKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREA 682
Query: 65 RDVLKEMKEYGCYPD-----------------------AAAYNAAIRNYCIAKRLRDASG 101
+ + +M E G P + AY+ I+ C + +DA
Sbjct: 683 EEFMSKMLEKGXLPXQVLQLDXNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMR 742
Query: 102 LMDEMVEKGLSPNATTY 118
+ E +KG++ + +TY
Sbjct: 743 IFGESKQKGITVDKSTY 759
>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 109/214 (50%), Gaps = 6/214 (2%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+KPD+ ++N L++ +CKD ++++ + + M + I P+ ++Y S++ G LV + +KA+
Sbjct: 291 IKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAK 350
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+ M + G PD +Y+ I +C K+ +A L EM K + P+ TY+
Sbjct: 351 SIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGL 410
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMF---LVKLCKRQEKVEIALQLWNDMVEKGFG 182
S + + L +M G PN C + L LCK + V+ A+ L +KGF
Sbjct: 411 SKSGRISYALQLVDQMHDRGVPPNI--CTYNSILDALCKTHQ-VDKAIALLTKFKDKGFQ 467
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGH 216
I +L LC GKL +A K F +++ KG+
Sbjct: 468 PDISTYSILIKGLCQSGKLEDARKVFEDLLVKGY 501
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 115/237 (48%), Gaps = 2/237 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+KP+ V+YN L+D YC ++V KA I M ++PD+ SY+ +I G + +
Sbjct: 321 MMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKK 380
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A ++ KEM PD Y++ I + R+ A L+D+M ++G+ PN TYN
Sbjct: 381 FDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNS 440
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++ + + L + G P+ + L+K + K+E A +++ D++ KG
Sbjct: 441 ILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKG 500
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQE 237
+ + ++ C G EA +M + G P ++ I ++ L K E
Sbjct: 501 YNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEII--ILSLFKKDE 555
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 114/221 (51%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
V+P++V YN +ID CK + V +A+ + +M + ISPDV++Y+++I G ++G+ A
Sbjct: 221 VQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAI 280
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
D+ +M PD +N + +C ++++ + D M+++G+ PN TYN +
Sbjct: 281 DLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGY 340
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
++ + +++ M G P+ QS ++ + +K + A+ L+ +M K +
Sbjct: 341 CLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDV 400
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ L D L G++ A + +M ++G P+ ++ I
Sbjct: 401 VTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSI 441
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 96/180 (53%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + PD+V+Y+ LID K ++ A ++V++M D + P++ +Y SI+ L Q
Sbjct: 391 MHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQ 450
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA +L + K+ G PD + Y+ I+ C + +L DA + ++++ KG + + Y +
Sbjct: 451 VDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTI 510
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ F + L +M GC+P+ ++ ++ ++++ ++A +L +M+ +G
Sbjct: 511 MIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARG 570
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 106/221 (47%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
+MG PD +++ L C Q+++A+ +K+ D ISY ++I GL VG+
Sbjct: 148 KMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETR 207
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
A D+L+ + P+ YN I + C K + +A L EMV KG+SP+ TY+
Sbjct: 208 AALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALI 267
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
F L+ + +L+ +M+ P+ + LV + K++ +++ M+++G
Sbjct: 268 SGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIK 327
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + L D C + ++ +A+ F M + G P S+
Sbjct: 328 PNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSY 368
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 113/247 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+KP++V+ N LI+ +C+ + A+ + K+ PD I++T++ GL L GQ
Sbjct: 111 MEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQ 170
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++ G + D +Y I C R A L+ + + PN YN
Sbjct: 171 IQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNT 230
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ +++L+ M+ G P+ + L+ K++ A+ L+N M+ +
Sbjct: 231 IIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILEN 290
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ ++L + C GK+ E + F M+++G KP+ V++ + L + +
Sbjct: 291 IKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAK 350
Query: 241 NLSNKMA 247
++ N MA
Sbjct: 351 SIFNTMA 357
>gi|449519270|ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g19440, chloroplastic-like [Cucumis sativus]
Length = 799
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 121/247 (48%), Gaps = 2/247 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+ D ++YN LI +C + +VE +++ E+M I PD+ +Y ++ GL VG+
Sbjct: 491 MLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGK 550
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A + E K G + Y + YC A R+ D L +E++ K + N+ YN+
Sbjct: 551 LDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNI 610
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + ++ ++ L M G LPN + L+ VE A L ++M ++G
Sbjct: 611 IIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEG 670
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEAL 239
F ++ L C +G++ AE ++LEMI P++ ++ I +L N ++A
Sbjct: 671 FVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKA- 729
Query: 240 QNLSNKM 246
NL KM
Sbjct: 730 NNLLIKM 736
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 123/262 (46%), Gaps = 37/262 (14%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++G+ P++V+YNC+I+ C++ +++ A+++ EKM + + P++ +Y ++I GL +
Sbjct: 246 MEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNF 305
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DK +L EM G P+ +N I YC + A + D M+ K ++P + T
Sbjct: 306 FDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYS 365
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSC--------------------------- 153
+ F S+ + + N ++ +G + +C
Sbjct: 366 LMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRN 425
Query: 154 ---------MFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEA 204
M + LCK + +E A +LW ++EKG + + S+ L LC GKL EA
Sbjct: 426 FRPSDLLLTMLVCGLCKDGKHLE-ATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEA 484
Query: 205 EKSFLEMIEKGHKPSQVSFRRI 226
+ EM+E+G ++++ +
Sbjct: 485 SRIVKEMLERGLPMDRITYNAL 506
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 78/148 (52%), Gaps = 1/148 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G+ P+ +Y+ LI C VE A ++++MR E P+V+ YT++IGG +GQ
Sbjct: 631 MKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQ 690
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A EM + +P+ Y I YC + A+ L+ +M E G+ P+ TYN+
Sbjct: 691 MDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNV 750
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLP 148
F +ND+ +++ + C M T LP
Sbjct: 751 LTNGFCKANDMDNAFKV-CDQMATEGLP 777
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 105/253 (41%), Gaps = 35/253 (13%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PD+ S+ +I+ CK ++E A ++ KM ISP+V++Y II GL G+ D A
Sbjct: 215 GACPDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNA 274
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF-- 122
++ ++M G P+ Y A I + ++DEM+ G +PN +N
Sbjct: 275 FELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDG 334
Query: 123 --------------RVFYWSNDLRSSWNLYCRMMG-------------------TGCLPN 149
V N +S LY M G +G +
Sbjct: 335 YCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIH 394
Query: 150 TQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFL 209
+C +V ++ + A + M+ + F L+ +L LC GK +EA + +
Sbjct: 395 PDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWF 454
Query: 210 EMIEKGHKPSQVS 222
++EKG S+V+
Sbjct: 455 RLLEKGSPASKVT 467
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 85/171 (49%)
Query: 11 VSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKE 70
+ YN +I +C++ V A +++E M+ + I P+ +Y+S+I G+ +G + A+ ++ E
Sbjct: 606 IVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDE 665
Query: 71 MKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSND 130
M++ G P+ Y A I YC ++ A EM+ + PN TY + + +
Sbjct: 666 MRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGN 725
Query: 131 LRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
+ + NL +M +G +P+ + L + ++ A ++ + M +G
Sbjct: 726 MEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGL 776
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 63/118 (53%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G P++V Y LI YCK Q++ A +M +I P+ +YT +I G +G
Sbjct: 666 MRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGN 725
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
+KA ++L +MKE G PD YN +C A + +A + D+M +GL + TY
Sbjct: 726 MEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITY 783
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 109/244 (44%), Gaps = 7/244 (2%)
Query: 4 MGVKPDIVSYNCLIDVY--CKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
+ + PD NC V+ CK + A++ + M + P + T ++ GL G+
Sbjct: 391 LSIHPD----NCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKH 446
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
+A ++ + E G NA I C A +L +AS ++ EM+E+GL + TYN
Sbjct: 447 LEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNAL 506
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
F + + L M G P+ + FL++ K++ A++LW++ G
Sbjct: 507 ILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGL 566
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEALQ 240
S I ++ + C ++ + E F E++ K + + + + IKA + N ALQ
Sbjct: 567 ISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQ 626
Query: 241 NLSN 244
L N
Sbjct: 627 LLEN 630
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 90/211 (42%), Gaps = 1/211 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G P + + N + K + EK ++ M E PDV S+T++I L G+ + A
Sbjct: 181 GTFPSLKTCNFXLSSLVKANEFEKCCEVFRVM-SEGACPDVFSFTNVINALCKGGKMENA 239
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++ +M++ G P+ YN I C RL +A L ++M KG+ PN TY
Sbjct: 240 IELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALING 299
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
N ++ M+G G PN L+ + +E AL++ + M+ K
Sbjct: 300 LIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPT 359
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
+ L C ++ AE + E++ G
Sbjct: 360 SVTLYSLMQGFCKSDQIEHAENALEEILSSG 390
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 100/226 (44%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +P + L+ CKD + +A ++ ++ ++ ++ ++I GL G+
Sbjct: 421 MLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGK 480
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++KEM E G D YNA I +C ++ L +EM ++G+ P+ TYN
Sbjct: 481 LPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNF 540
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
R L + L+ +G + N + +++ + ++E L+N+++ K
Sbjct: 541 LLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKK 600
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+V +++ C G + A + M KG P+ ++ +
Sbjct: 601 MELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSL 646
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 95/222 (42%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ +I +Y +++ YCK ++E + ++ + + + I Y II G A
Sbjct: 565 GLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAA 624
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+L+ MK G P+ A Y++ I C + DA L+DEM ++G PN Y
Sbjct: 625 LQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGG 684
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + ++ + + M+ PN + ++ + +E A L M E G
Sbjct: 685 YCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPD 744
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ +VL + C + A K +M +G ++++ +
Sbjct: 745 VVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTL 786
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 37/54 (68%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGG 54
M+E G+ PD+V+YN L + +CK ++ A+K+ ++M E + D I+YT+++ G
Sbjct: 736 MKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHG 789
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 41/90 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + P+ +Y +ID YCK +EKA ++ KM++ I PDV++Y + G
Sbjct: 701 MISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKAND 760
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNY 90
D A V +M G D Y + +
Sbjct: 761 MDNAFKVCDQMATEGLPVDEITYTTLVHGW 790
>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
[Vitis vinifera]
gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
Length = 890
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 132/257 (51%), Gaps = 4/257 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E G +P++ +Y LID CK+ ++++A K++ +M ++ + P V++Y ++I G G
Sbjct: 325 MKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGM 384
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A ++L M+ C P+ YN I C +++ A L+++M+E+ LSP+ TYN
Sbjct: 385 IDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNS 444
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEK 179
NDL S++ L M G +P+ + +F+ LCK + +VE A L++ + K
Sbjct: 445 LIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCK-EGRVEEAGTLFDSVKAK 503
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
G + ++ L D C +GK+ A M+ P+ ++ + + K +
Sbjct: 504 GVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEA 563
Query: 240 QNLSNKMALFG--PSMI 254
+L KM G P+++
Sbjct: 564 SSLVAKMLTMGVKPTVV 580
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 109/224 (48%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G + + VSY LI C+ ++ +A K+ M +++ P V +YT +I L G+
Sbjct: 255 MPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGR 314
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++ EMKE GC P+ Y I C ++ +A ++ EM EKGL P+ TYN
Sbjct: 315 KVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNA 374
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEK 179
+ + ++ + M C PNT++ L+ LCK++ KV A+ L N M+E+
Sbjct: 375 LIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKR-KVHKAMALLNKMLER 433
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + L C + L A + M E G P Q ++
Sbjct: 434 KLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTY 477
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 102/216 (47%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P+ +YN LI CK R+V KA ++ KM + +SP +I+Y S+I G V + A +
Sbjct: 402 PNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRL 461
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L M E G PD Y+ I C R+ +A L D + KG+ N Y +
Sbjct: 462 LSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCK 521
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ +++L RM+ CLPN+ + L++ +++K++ A L M+ G ++
Sbjct: 522 VGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVT 581
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+L + G A K F M+ G++P ++
Sbjct: 582 YTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTY 617
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 99/223 (44%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E + P +++YN LI CK +E AY+++ M + + PD +Y+ I L G+
Sbjct: 430 MLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGR 489
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A + +K G + Y A I YC ++ A L++ M+ PN+ TYN+
Sbjct: 490 VEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNV 549
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++ + +L +M+ G P + L+ + + AL+++N MV G
Sbjct: 550 LIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLG 609
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + G L E + +M E+G P V++
Sbjct: 610 YQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTY 652
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 93/221 (42%), Gaps = 35/221 (15%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ P+I ++N +++ YCK V +A K+ + PD +YTS+I G D A
Sbjct: 190 ISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAY 249
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+V M + GC + +Y I C A R+ +A L +M E P TY +
Sbjct: 250 EVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYA- 308
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ G+G KVE AL L+N+M EKG +
Sbjct: 309 ---------------LSGSG------------------RKVE-ALNLFNEMKEKGCEPNV 334
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
VL D LC K+ EA K EM EKG PS V++ +
Sbjct: 335 HTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNAL 375
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 106/269 (39%), Gaps = 53/269 (19%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDE------------------------- 39
GVK + V Y LID YCK +++ AY ++E+M ++
Sbjct: 504 GVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEA 563
Query: 40 ----------DISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRN 89
+ P V++YT +IG + G D A V M G PD Y A +
Sbjct: 564 SSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHA 623
Query: 90 YCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPN 149
Y L + ++ +M E+G+ P+ TY + + +++ M+ TGC P+
Sbjct: 624 YFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPS 683
Query: 150 TQSCMFLVKLCKRQEKV------------------EIALQLWNDMVEKGFGSYILVSDVL 191
L+K + ++ EIAL+L+ MVE G + + L
Sbjct: 684 LYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGAL 743
Query: 192 FDLLCDMGKLVEAEKSFLEMIEKGHKPSQ 220
C +L EA+ M E+G PS+
Sbjct: 744 IAGFCQQERLEEAQGLVHHMKERGMSPSE 772
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 98/242 (40%), Gaps = 18/242 (7%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M MGVKP +V+Y LI KD + A K+ M PDV +YT+ + G
Sbjct: 570 MLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGM 629
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++ DV+ +M E G PD Y I Y A + MV+ G P+ ++
Sbjct: 630 LEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSI 689
Query: 121 FFRVFYWSNDLRSS------------------WNLYCRMMGTGCLPNTQSCMFLVKLCKR 162
+ N ++ + L+ +M+ GC + L+ +
Sbjct: 690 LIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQ 749
Query: 163 QEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
QE++E A L + M E+G + + L D C +G EA + M+E G P S
Sbjct: 750 QERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLES 809
Query: 223 FR 224
++
Sbjct: 810 YK 811
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 59/122 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E G+ P YN L+D CK +A ++V+ M + + P + SY ++ GL + G
Sbjct: 763 MKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGS 822
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA+ V + G D A+ I + + S L+D M EKG PN TY+L
Sbjct: 823 NEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSL 882
Query: 121 FF 122
Sbjct: 883 LI 884
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/268 (20%), Positives = 92/268 (34%), Gaps = 88/268 (32%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G +PD+ +Y + Y +E+ ++ KM +E I PD+++YT +I G +G
Sbjct: 605 MVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGL 664
Query: 61 PDKARDVLK--------------------------------------------------- 69
+A D LK
Sbjct: 665 THRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKL 724
Query: 70 --EMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLM------------------------ 103
+M E+GC D + Y A I +C +RL +A GL+
Sbjct: 725 FEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCK 784
Query: 104 -----------DEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS 152
D MVE GL P +Y L Y + ++ ++ G + +
Sbjct: 785 LGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVA 844
Query: 153 CMFLVKLCKRQEKVEIALQLWNDMVEKG 180
L+ +++ V+ +L + M EKG
Sbjct: 845 WKVLIDGLLKRDLVDECSELIDIMEEKG 872
>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
Length = 736
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 115/242 (47%), Gaps = 16/242 (6%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD +Y+ +I C +VEKA+ + ++M+ ++PDV +YT +I G
Sbjct: 214 MMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGL 273
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A+ + +EM+ GC P Y A I Y AK++ A+ + MV+ G PN TY
Sbjct: 274 IEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGA 333
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTG----------------CLPNTQSCMFLVKLCKRQE 164
+ ++ ++ +Y +++GT PN + LV +
Sbjct: 334 LVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAH 393
Query: 165 KVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
KV+ A +L + M+ G +V D L D C GK+ A++ FL+M + G+ PS ++
Sbjct: 394 KVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYT 453
Query: 225 RI 226
+
Sbjct: 454 SL 455
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 122/268 (45%), Gaps = 16/268 (5%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR +G P +V+Y LI Y K +QV +A I +M D P+ ++Y +++ GL G
Sbjct: 284 MRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGN 343
Query: 61 PDKARDVLKEM----------------KEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMD 104
KA +V ++ + P+ Y A + C A ++ A L+D
Sbjct: 344 ISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLD 403
Query: 105 EMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQE 164
M+ G PN Y+ F + + S+ ++ +M G LP+ + L+ +
Sbjct: 404 AMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDG 463
Query: 165 KVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
++++A+++ + M++ ++ + D LC +G+ +A K M EKG P+ V++
Sbjct: 464 RLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYT 523
Query: 225 RIKALMELANKQEALQNLSNKMALFGPS 252
+ + A K + +L +M+ G S
Sbjct: 524 ALIDGLGKAGKIDLSLDLFTQMSRKGCS 551
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 112/240 (46%), Gaps = 16/240 (6%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKM------RDED----------ISPD 44
M + G +P+ V+Y L+D CK + KA+++ K+ D D ++P+
Sbjct: 319 MVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPN 378
Query: 45 VISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMD 104
V++Y +++ GL + D A ++L M GC P+ Y+A I +C A ++ A +
Sbjct: 379 VVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFL 438
Query: 105 EMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQE 164
+M + G P+ TY + L + + +M+ C PN + ++ R
Sbjct: 439 QMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIG 498
Query: 165 KVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
+ E AL+L + M EKG ++ L D L GK+ + F +M KG P+ V++R
Sbjct: 499 ESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYR 558
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 123/277 (44%), Gaps = 38/277 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G P + +Y LID KD +++ A K++ +M + +P+V++YT++I GL +G+
Sbjct: 440 MTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGE 499
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA +L M+E GC P+ Y A I A ++ + L +M KG SPN TY +
Sbjct: 500 SEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRV 559
Query: 121 FF-------------------RVFYW--------------SNDLRSSWNLYCRMMGTGCL 147
+ YW S +S + M G +
Sbjct: 560 LINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTV 619
Query: 148 PNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDV---LFDLLCDMGKLVEA 204
P L+ + ++EIA++L +M+E S +D+ L LC ++ EA
Sbjct: 620 PIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVP-SSVKTDNDMYASLIQALCLASQVEEA 678
Query: 205 EKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEALQ 240
+ + EM +G P F IK L+E+ EALQ
Sbjct: 679 FRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQ 715
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 94/206 (45%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ P++V+Y L+D CK +V+ A+++++ M P+ I Y ++I G G+ D A+
Sbjct: 375 LAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQ 434
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+V +M + G P Y + I RL A ++ +M++ +PN TY
Sbjct: 435 EVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGL 494
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ + L M GC PN + L+ + K++++L L+ M KG
Sbjct: 495 CRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNY 554
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEM 211
+ VL + LC G L +A EM
Sbjct: 555 VTYRVLINHLCAAGLLDKARLLLGEM 580
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 110/259 (42%), Gaps = 15/259 (5%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G D + C CK+ + A ++E+ ED D + T +I GL
Sbjct: 1 MSESGFCMDRFTVGCFAHALCKEGRWADALDMIER---EDFKLDTVLCTHMISGLMEASY 57
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A L M+ C P+ Y + + K+L +++ M+ +G +PN + +N
Sbjct: 58 FDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNS 117
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPN-TQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ D ++ L RM GC P +F+ +C QEK+ L D+ EK
Sbjct: 118 LVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICG-QEKLPSPDLL--DLAEK 174
Query: 180 GFGSYILVSDVLFDL--------LCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALME 231
+G + + VL + LC +GK +A + EM+ KG P ++ ++ +
Sbjct: 175 IYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLC 234
Query: 232 LANKQEALQNLSNKMALFG 250
A K E L +M + G
Sbjct: 235 HATKVEKAFLLFQEMKMVG 253
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 93/243 (38%), Gaps = 70/243 (28%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P++V+Y +ID C+ + EKA K++ M ++ SP+V++YT++I GLG G+ D + D+
Sbjct: 482 PNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDL 541
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDAS--------------------------- 100
+M GC P+ Y I + C A L A
Sbjct: 542 FTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSK 601
Query: 101 ------GLMDEMVEKGLSPNATTYNLFFRVFYWS-----------------------NDL 131
G+++EM G P A Y + F + ND+
Sbjct: 602 SFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDM 661
Query: 132 RSS--------------WNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
+S + LY M G +P + L+K +K + ALQL +
Sbjct: 662 YASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGIC 721
Query: 178 EKG 180
+G
Sbjct: 722 HEG 724
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 98/249 (39%), Gaps = 11/249 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P+ +N L+ YC ++ AYK++ +M P + Y IG + GQ
Sbjct: 103 MMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSI--CGQ 160
Query: 61 P--------DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLS 112
D A + EM C + R C + A L+ EM+ KG
Sbjct: 161 EKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFV 220
Query: 113 PNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQL 172
P+ +TY+ + + ++ L+ M G P+ + L+ + +E A L
Sbjct: 221 PDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWL 280
Query: 173 WNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALME 231
+ +M G ++ L ++ +A F M++ G +P+ V++ + L +
Sbjct: 281 FEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCK 340
Query: 232 LANKQEALQ 240
N +A +
Sbjct: 341 AGNISKAFE 349
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 97/246 (39%), Gaps = 8/246 (3%)
Query: 27 EKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAA 86
++A + +MR P+V++Y +++ G Q + ++ M GC P+ + +N+
Sbjct: 59 DEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSL 118
Query: 87 IRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRS------SWNLYCR 140
+ +YC K A L++ M G P YN+F L S + +Y
Sbjct: 119 VHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGE 178
Query: 141 MMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGK 200
M+ C+ N + + K + A QL +M+ KGF + LC K
Sbjct: 179 MLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATK 238
Query: 201 LVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFGPSMIPKREEY 260
+ +A F EM G P ++ + A E Q L +M G S P Y
Sbjct: 239 VEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCS--PTVVTY 296
Query: 261 LAEMSA 266
A + A
Sbjct: 297 TALIHA 302
>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
Length = 902
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 107/219 (48%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ PD+ +YN LI+ +CK+ V+KA +I E M + V++YT++I L GQ +
Sbjct: 656 GLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQET 715
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ E G PD YNA I ++ + + A +M EM +K ++P+ TYN R
Sbjct: 716 DKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRG 775
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + L M G P+ + L+ + V+ AL++ N+M+ KGF
Sbjct: 776 LCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPT 835
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+L + L LC G+ +AE EM+E G P ++
Sbjct: 836 LLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTY 874
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 120/252 (47%), Gaps = 9/252 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDE-DISPDVISYTSIIGGLGLVG 59
+R+M +P+ V+YN +I +C +V+ A I+ +MR+ I+P+ +Y ++I G VG
Sbjct: 511 LRQMP-RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVG 569
Query: 60 QPDKARDVLKEMKEYG-CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
+ D+A V EM G P+A YNA I YC +L A D MVE+G++ TY
Sbjct: 570 RVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATY 629
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
NL + ++ L M G G P+ + L+ ++ V+ AL+++ +M
Sbjct: 630 NLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSR 689
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEA 238
+G + ++ L L G++ E +K F E + +G +P V + L N
Sbjct: 690 RGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYN------ALINSHST 743
Query: 239 LQNLSNKMALFG 250
N+ + G
Sbjct: 744 SGNIDRAFEIMG 755
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 88/154 (57%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G++PD+V YN LI+ + +++A++I+ +M + I+PD ++Y +++ GL L+G+ D+A
Sbjct: 726 GIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEA 785
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
R ++ EM E G PD YN I Y + ++DA + +EM+ KG +P TYN +
Sbjct: 786 RKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQG 845
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK 158
+ + N+ M+ G P+ + + L++
Sbjct: 846 LCKNGQGDDAENMVKEMVENGITPDDSTYISLIE 879
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 120/255 (47%), Gaps = 5/255 (1%)
Query: 1 MREM----GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDE-DISPDVISYTSIIGGL 55
MREM G+ P+ +Y +I +CK +V++A K+ ++M + ++ P+ + Y ++IGG
Sbjct: 542 MREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGY 601
Query: 56 GLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNA 115
G+ D A M E G A YN + + R +A L++EM KGL+P+
Sbjct: 602 CDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDV 661
Query: 116 TTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWND 175
TYN+ +++ + ++ M G + L+ ++ +V+ +L+++
Sbjct: 662 FTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDE 721
Query: 176 MVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANK 235
V +G +++ + L + G + A + EM +K P V++ + + L +
Sbjct: 722 AVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGR 781
Query: 236 QEALQNLSNKMALFG 250
+ + L ++M G
Sbjct: 782 VDEARKLIDEMTERG 796
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 53/87 (60%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G++PD+V+YN LI Y V+ A +I +M ++ +P +++Y ++I GL GQ
Sbjct: 792 MTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQ 851
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAI 87
D A +++KEM E G PD + Y + I
Sbjct: 852 GDDAENMVKEMVENGITPDDSTYISLI 878
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 89/191 (46%), Gaps = 9/191 (4%)
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEK-GLSPNAT 116
G+P +A ++L++M P+A YN I +C R++ A +M EM E+ G++PN
Sbjct: 501 AGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQY 556
Query: 117 TYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMF--LVKLCKRQEKVEIALQLWN 174
TY + + + ++ M+ G + ++ M+ L+ Q K++ AL +
Sbjct: 557 TYGTVISGWCKVGRVDEAVKVFDEMLTKGEV-KPEAVMYNALIGGYCDQGKLDTALLYRD 615
Query: 175 DMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELA 233
MVE+G + ++L L G+ EA + EM KG P ++ I +
Sbjct: 616 RMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEG 675
Query: 234 NKQEALQNLSN 244
N ++AL+ N
Sbjct: 676 NVKKALEIFEN 686
Score = 44.3 bits (103), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 33/55 (60%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGL 55
M G P +++YN LI CK+ Q + A +V++M + I+PD +Y S+I GL
Sbjct: 827 MMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 881
>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
Length = 820
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 123/241 (51%), Gaps = 3/241 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E+G +P +Y L+D++C++++ E+A KI+ +M D + P V++ T ++ G+
Sbjct: 256 MKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGR 315
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A V + M+ GC P+ YNA ++ +C A ++ A L+D+M E G+ P+ TYNL
Sbjct: 316 MSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNL 375
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
R + S++ L M G G + + L+ + KV+ A L++ + +G
Sbjct: 376 LIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRG 435
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLE-MIEKGHKPSQVSFRR-IKALMELANKQEA 238
+ + + + LC GK + +FLE MI G+ P ++ I+ L + QE
Sbjct: 436 IRPNSVTFNTVINGLCKAGKF-DVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEG 494
Query: 239 L 239
L
Sbjct: 495 L 495
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 104/223 (46%), Gaps = 4/223 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G +PD ++N LI YC+ +Q+E A+ + KM S D +SY ++I G G+
Sbjct: 155 MVRSGWRPDAFTFNSLILGYCRTQQLEVAHDLFCKMPFRGFSQDAVSYAALIEGFCEAGR 214
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A ++ +EM + PD + A ++ C A R + ++ +M E G P Y
Sbjct: 215 IDEALELFREMTQ----PDMYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAA 270
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++ + + M +G +P +C +V R+ ++ A++++ M KG
Sbjct: 271 LVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKG 330
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + + C+ GK+ +A +M E G +P V++
Sbjct: 331 CEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTY 373
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 98/223 (43%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ D +YN LID CK +V++A + + + I P+ +++ ++I GL G+
Sbjct: 396 MEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGK 455
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A L+ M G PD Y+ I N C K ++ +DEM++K + P+ Y +
Sbjct: 456 FDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTI 515
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + ++ +M+ GC P+ + V+ + +++ A + +M +
Sbjct: 516 VINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCR 575
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + L D +G+ A M P+ +F
Sbjct: 576 TIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPNHFTF 618
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 98/225 (43%), Gaps = 4/225 (1%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
R P +YN LI C+ + A + + M PD ++ S+I G Q
Sbjct: 121 RHAPPAPTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQL 180
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
+ A D+ +M G DA +Y A I +C A R+ +A L EM + P+ T+
Sbjct: 181 EVAHDLFCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMTQ----PDMYTHAAL 236
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
+ + + +M G P T++ LV L R++K E A ++ N+M + G
Sbjct: 237 VKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGL 296
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ ++ + C G++ A + F M KG +P+ ++ I
Sbjct: 297 MPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAI 341
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/244 (20%), Positives = 91/244 (37%), Gaps = 51/244 (20%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD+V+Y + YC + ++++A +V +M+ D ++Y ++I G +GQ
Sbjct: 536 MVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQ 595
Query: 61 PDKARDVLKEMKEYGCYPD----------------------------------------- 79
D+A +LK M P+
Sbjct: 596 TDRAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEHVPLKATSVWKTIELADVFELFE 655
Query: 80 ----------AAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSN 129
A Y + + + +RL + + L+ M E+ L N YN F
Sbjct: 656 LMKKNSVPSSARTYLSILEGFSEERRLDEVTSLVSLMKEENLPLNEDIYNALVNCFCKLR 715
Query: 130 DLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSD 189
+W L C M+G G LPN +L+ + + + A +++ K + + +V
Sbjct: 716 MYSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRAKEIFRSSRWKEYNTDEIVWK 775
Query: 190 VLFD 193
V+ D
Sbjct: 776 VIID 779
>gi|116310235|emb|CAH67244.1| OSIGBa0140O07.12 [Oryza sativa Indica Group]
Length = 581
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 106/206 (51%), Gaps = 1/206 (0%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
PD+ S+N +I C+ QV+KA ++VE+M + SPD +++ I+ GL + + +
Sbjct: 246 SPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHE 305
Query: 67 VLKEMKEYG-CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
VL+ ++ G C P+ + + I YC A +L DA + ++MV G+ PN TYN+ +
Sbjct: 306 VLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGY 365
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
DL S+ +Y +M C P+ + L+ R +++ AL++W+DM + +
Sbjct: 366 GKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNV 425
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEM 211
++ LC + EA + E+
Sbjct: 426 YTFSIIIHSLCKQNRSDEAIRLLNEL 451
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 104/225 (46%), Gaps = 2/225 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKM-RDEDISPDVISYTSIIGGLGLVG 59
M E G PD V++N ++D C+ +V + ++++ ++ RD P+V+++TS+I G G
Sbjct: 275 MNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAG 334
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ + A V +M G P+ YN I Y L A + +M P+ T++
Sbjct: 335 KLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFS 394
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDM-VE 178
+ L + ++ M PN + ++ +Q + + A++L N++ +
Sbjct: 395 SLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIRLLNELNLR 454
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + + D+LC GK+ EA M EKG +P + ++
Sbjct: 455 PDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTY 499
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 66/123 (53%), Gaps = 1/123 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMR-DEDISPDVISYTSIIGGLGLVG 59
M + ++P++ +++ +I CK + ++A +++ ++ DI+P Y +I L G
Sbjct: 416 MAQHRIQPNVYTFSIIIHSLCKQNRSDEAIRLLNELNLRPDIAPQAFIYNPVIDVLCKCG 475
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ D+A + K M+E GC PD Y I YC+ R+ +A EMVE G SP++ T N
Sbjct: 476 KVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVN 535
Query: 120 LFF 122
F
Sbjct: 536 CFI 538
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 87/181 (48%), Gaps = 1/181 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ P+ V+YN LI+ Y K + A ++ ++M PDV++++S+I G GQ
Sbjct: 346 MVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQ 405
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEM-VEKGLSPNATTYN 119
D A + +M ++ P+ ++ I + C R +A L++E+ + ++P A YN
Sbjct: 406 LDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIRLLNELNLRPDIAPQAFIYN 465
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
V + + + M GC P+ + L+ + ++ A+ +++MVE
Sbjct: 466 PVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEA 525
Query: 180 G 180
G
Sbjct: 526 G 526
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/258 (20%), Positives = 101/258 (39%), Gaps = 38/258 (14%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDE-DISPDVISYTSIIGGLGLVGQPD 62
+ + P S +I V C+ + A ++ ++M SPD + ++ D
Sbjct: 136 LSITPSAHSCQQIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLSFLVSSCTCANLLD 195
Query: 63 KARDVLKEMKEYGCYPDAAAY------------------------------------NAA 86
+ +L + E+GC +A AY N
Sbjct: 196 ASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRLYSPDVWSFNVV 255
Query: 87 IRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG- 145
I+ C +++ A L++ M E G SP+ T+N+ +N++ + R+ G
Sbjct: 256 IKGVCRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGV 315
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
C+PN + ++ + K+E A+ ++NDMV G + +VL + +G L A
Sbjct: 316 CMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAV 375
Query: 206 KSFLEMIEKGHKPSQVSF 223
+ + +M P V+F
Sbjct: 376 EVYQQMTRLRCPPDVVTF 393
Score = 40.8 bits (94), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 33/69 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G +PD +Y LI YC ++ +A +M + SPD I+ I L G
Sbjct: 487 MEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAGM 546
Query: 61 PDKARDVLK 69
P++ V++
Sbjct: 547 PNEVDHVMR 555
>gi|297840249|ref|XP_002888006.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297333847|gb|EFH64265.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 485
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 121/227 (53%), Gaps = 8/227 (3%)
Query: 1 MREMGVK---PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGL 57
MR+M ++ P+++++ LI+ + ++ + +A K E+M I PDV +Y S+I GL +
Sbjct: 232 MRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCM 291
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
GQ D+A+ +L M GC+PD YN I +C KR+ + + L+ EM ++GL + T
Sbjct: 292 HGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVT 351
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDM 176
+N + ++ + ++ ++ RM G PN ++ + L LC +VE AL L+ M
Sbjct: 352 FNTIIQGYFQAGRPDAAQEIFSRM---GSRPNIRTYSILLYGLCYNW-RVEKALVLFESM 407
Query: 177 VEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ I +++ +C +G + +A F + KG +P V++
Sbjct: 408 QKSEMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTY 454
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 110/247 (44%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G +PD+V+ + LI+ +C+ +V A +V KM + DV+ Y +II G G
Sbjct: 130 MMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRCKLDVVIYNTIIDGFCKTGL 189
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A + M+ G D YN+ + C + R DA+ LM +MV + + PN T+
Sbjct: 190 VNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAARLMRDMVMRDIVPNVITFTA 249
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + Y M+ P+ + ++ +V+ A Q+ + MV KG
Sbjct: 250 LINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLMVTKG 309
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
++ + L + C ++ E K EM ++G V+F I A + +A Q
Sbjct: 310 CFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGRPDAAQ 369
Query: 241 NLSNKMA 247
+ ++M
Sbjct: 370 EIFSRMG 376
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 88/181 (48%), Gaps = 3/181 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD+V+YN LI+ +CK ++V++ K+V +M + D +++ +II G G+
Sbjct: 305 MVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGR 364
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
PD A+++ M G P+ Y+ + C R+ A L + M + + + TTYN+
Sbjct: 365 PDAAQEIFSRM---GSRPNIRTYSILLYGLCYNWRVEKALVLFESMQKSEMELDITTYNI 421
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++ +W+L+C + G P+ + ++ R+ + A L+ M E G
Sbjct: 422 VIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFCRKRLWDKADFLYRKMQEDG 481
Query: 181 F 181
Sbjct: 482 L 482
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 96/219 (43%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ D+ +YN +I+ C+ + A +V KM PDV++ +S+I G + A
Sbjct: 99 GIGHDLYTYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGA 158
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
D++ +M+E C D YN I +C + +A L M G+ + TYN
Sbjct: 159 VDLVSKMEEMRCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTG 218
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
S + L M+ +PN + L+ R+ K A + + +M+ +
Sbjct: 219 LCCSGRRSDAARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPD 278
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + + LC G++ EA++ M+ KG P V++
Sbjct: 279 VFTYNSMIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTY 317
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 59/112 (52%), Gaps = 2/112 (1%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
MG +P+I +Y+ L+ C + +VEKA + E M+ ++ D+ +Y +I G+ ++G +
Sbjct: 374 RMGSRPNIRTYSILLYGLCYNWRVEKALVLFESMQKSEMELDITTYNIVIHGMCMIGNVE 433
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRD-ASGLMDEMVEKGLSP 113
A D+ + G PD Y I +C KRL D A L +M E GL P
Sbjct: 434 DAWDLFCSLSFKGLEPDVVTYTTMISGFC-RKRLWDKADFLYRKMQEDGLLP 484
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 98/237 (41%), Gaps = 3/237 (1%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P IV ++ L+ K + + + M I D+ +Y +I L + A V
Sbjct: 67 PSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNIVINCLCRCSRFVIALSV 126
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
+ +M ++G PD ++ I +C R+ A L+ +M E + YN F
Sbjct: 127 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRCKLDVVIYNTIIDGFCK 186
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+ + ++ L+ RM G +T + LV LC + + A +L DMV + ++
Sbjct: 187 TGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAA-RLMRDMVMRDIVPNVI 245
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNL 242
L + GK +EA+K + EMI + P ++ I L EA Q L
Sbjct: 246 TFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQIL 302
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ ++ DI +YN +I C VE A+ + + + + PDV++YT++I G
Sbjct: 407 MQKSEMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFCRKRL 466
Query: 61 PDKARDVLKEMKEYGCYP 78
DKA + ++M+E G P
Sbjct: 467 WDKADFLYRKMQEDGLLP 484
>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
Length = 644
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 114/226 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + P+IV++N LI C++ E+ ++++ +M + +PD+ Y +II G+ G
Sbjct: 242 MVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGH 301
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A ++L M YG P+ YN ++ C A+R ++A L+ EM +K + T+N+
Sbjct: 302 LEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNI 361
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + + L +M+ GC+P+ + ++ ++ ++ A+ L M G
Sbjct: 362 LVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCG 421
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ ++ LC G+ V+AE+ +MI++G P+ V+F +
Sbjct: 422 CKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTL 467
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 93/179 (51%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
D V++N L+D +C++ V++ +++E+M PDVI+YT++I G G D+A +L
Sbjct: 355 DDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLL 414
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
K M GC P+ +Y ++ C A R DA LM +M+++G PN T+N
Sbjct: 415 KSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKK 474
Query: 129 NDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ + L +M+ GC P+ S ++ + K E AL+L N MV KG ++
Sbjct: 475 GLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTII 533
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 116/253 (45%), Gaps = 2/253 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G PDI Y +ID CK+ +E A +I+ +M + P+V+ Y +++ GL +
Sbjct: 277 MSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAER 336
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++L EM + C D +N + +C + L+++M+ G P+ TY
Sbjct: 337 WKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTT 396
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
F + + L M GC PNT S ++K LC V+ A +L + M+++
Sbjct: 397 VINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVD-AEELMSQMIQQ 455
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
G + + L + LC G + +A + +M+ G P +S+ + + A K E
Sbjct: 456 GCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEA 515
Query: 240 QNLSNKMALFGPS 252
L N M G S
Sbjct: 516 LELLNVMVNKGIS 528
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 99/219 (45%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G P Y+ +++ C+ + +++E M + + D + ++ + G D+A
Sbjct: 141 GCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEA 200
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+L+++ +GC D +YNA ++ C+AKR D LMDEMV +PN T+N
Sbjct: 201 VGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGY 260
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + +M GC P+ + ++ ++ +E+A ++ N M G
Sbjct: 261 LCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPN 320
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + + LC + EAE+ EM +K V+F
Sbjct: 321 VVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTF 359
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 118/252 (46%), Gaps = 4/252 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD+++Y +I+ +CK+ +++A +++ M P+ +SYT ++ GL G+
Sbjct: 382 MLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGR 441
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +++ +M + GC P+ +N I C + A L+ +M+ G SP+ +Y+
Sbjct: 442 WVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYST 501
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + L M+ G PNT + R+ +V +Q+++++ +
Sbjct: 502 VIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTT 561
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALME--LANK-Q 236
S ++ + + LC + A F M+ G P++ ++ IK L LA + Q
Sbjct: 562 IRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQ 621
Query: 237 EALQNLSNKMAL 248
E L L ++ AL
Sbjct: 622 ELLSELCSRGAL 633
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 101/244 (41%), Gaps = 9/244 (3%)
Query: 10 IVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLK 69
+V+YN ++ YC+ Q+ A ++ + + P+ ++ ++ GL G+ A +VL
Sbjct: 79 VVAYNAMVAGYCRAGQLAAARRLAAAV---PVPPNAYTFFPVVRGLCTRGRIADALEVLD 135
Query: 70 EMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSN 129
EM GC P Y+ + C + R++ +++ M KG + + NL
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195
Query: 130 DLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LC--KRQEKVEIALQLWNDMVEKGFGSYIL 186
+ + L ++ GC + S ++K LC KR VE +L ++MV I+
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVE---ELMDEMVRVDCAPNIV 252
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKM 246
+ L LC G + +M E G P + I + E + N+M
Sbjct: 253 TFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRM 312
Query: 247 ALFG 250
+G
Sbjct: 313 PSYG 316
>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
Length = 644
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 114/226 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + P+IV++N LI C++ E+ ++++ +M + +PD+ Y +II G+ G
Sbjct: 242 MVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGH 301
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A ++L M YG P+ YN ++ C A+R ++A L+ EM +K + T+N+
Sbjct: 302 LEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNI 361
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + + L +M+ GC+P+ + ++ ++ ++ A+ L M G
Sbjct: 362 LVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCG 421
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ ++ LC G+ V+AE+ +MI++G P+ V+F +
Sbjct: 422 CKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTL 467
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 93/179 (51%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
D V++N L+D +C++ V++ +++E+M PDVI+YT++I G G D+A +L
Sbjct: 355 DDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLL 414
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
K M GC P+ +Y ++ C A R DA LM +M+++G PN T+N
Sbjct: 415 KSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKK 474
Query: 129 NDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ + L +M+ GC P+ S ++ + K E AL+L N MV KG ++
Sbjct: 475 GLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTII 533
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 116/253 (45%), Gaps = 2/253 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G PDI Y +ID CK+ +E A +I+ +M + P+V+ Y +++ GL +
Sbjct: 277 MSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAER 336
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++L EM + C D +N + +C + L+++M+ G P+ TY
Sbjct: 337 WKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTT 396
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
F + + L M GC PNT S ++K LC V+ A +L + M+++
Sbjct: 397 VINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVD-AEELMSQMIQQ 455
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
G + + L + LC G + +A + +M+ G P +S+ + + A K E
Sbjct: 456 GCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEA 515
Query: 240 QNLSNKMALFGPS 252
L N M G S
Sbjct: 516 LELLNVMVNKGIS 528
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 99/219 (45%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G P Y+ +++ C+ + +++E M + + D + ++ + G D+A
Sbjct: 141 GCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEA 200
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+L+++ +GC D +YNA ++ C+AKR D LMDEMV +PN T+N
Sbjct: 201 VGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGY 260
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + +M GC P+ + ++ ++ +E+A ++ N M G
Sbjct: 261 LCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPN 320
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + + LC + EAE+ EM +K V+F
Sbjct: 321 VVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTF 359
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 118/252 (46%), Gaps = 4/252 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD+++Y +I+ +CK+ +++A +++ M P+ +SYT ++ GL G+
Sbjct: 382 MLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGR 441
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +++ +M + GC P+ +N I C + A L+ +M+ G SP+ +Y+
Sbjct: 442 WVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYST 501
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + L M+ G PNT + R+ +V +Q+++++ +
Sbjct: 502 VIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTT 561
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALME--LANK-Q 236
S ++ + + LC + A F M+ G P++ ++ IK L LA + Q
Sbjct: 562 IRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQ 621
Query: 237 EALQNLSNKMAL 248
E L L ++ AL
Sbjct: 622 ELLSELCSRGAL 633
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 101/244 (41%), Gaps = 9/244 (3%)
Query: 10 IVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLK 69
+V+YN ++ YC+ Q+ A ++ + + P+ ++ ++ GL G+ A +VL
Sbjct: 79 VVAYNAMVAGYCRAGQLAAARRLAAAV---PVPPNAYTFFPVVRGLCTRGRIADALEVLD 135
Query: 70 EMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSN 129
EM GC P Y+ + C + R++ +++ M KG + + NL
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195
Query: 130 DLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LC--KRQEKVEIALQLWNDMVEKGFGSYIL 186
+ + L ++ GC + S ++K LC KR VE +L ++MV I+
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVE---ELMDEMVRVDCAPNIV 252
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKM 246
+ L LC G + +M E G P + I + E + N+M
Sbjct: 253 TFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRM 312
Query: 247 ALFG 250
+G
Sbjct: 313 PSYG 316
>gi|449462543|ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Cucumis sativus]
Length = 822
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 121/247 (48%), Gaps = 2/247 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+ D ++YN LI +C + +VE +++ E+M I PD+ +Y ++ GL VG+
Sbjct: 514 MLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGK 573
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A + E K G + Y + YC A R+ D L +E++ K + N+ YN+
Sbjct: 574 LDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNI 633
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + ++ ++ L M G LPN + L+ VE A L ++M ++G
Sbjct: 634 IIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEG 693
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEAL 239
F ++ L C +G++ AE ++LEMI P++ ++ I +L N ++A
Sbjct: 694 FVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKA- 752
Query: 240 QNLSNKM 246
NL KM
Sbjct: 753 NNLLIKM 759
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 123/262 (46%), Gaps = 37/262 (14%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++G+ P++V+YNC+I+ C++ +++ A+++ EKM + + P++ +Y ++I GL +
Sbjct: 269 MEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNF 328
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DK VL EM G P+ +N I YC + A + D M+ K ++P + T
Sbjct: 329 FDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYS 388
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSC--------------------------- 153
+ F S+ + + N ++ +G + +C
Sbjct: 389 LMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRN 448
Query: 154 ---------MFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEA 204
M + LCK + +E A +LW ++EKG + + S+ L LC GKL EA
Sbjct: 449 FRPSDLLLTMLVCGLCKDGKHLE-ATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEA 507
Query: 205 EKSFLEMIEKGHKPSQVSFRRI 226
+ EM+E+G ++++ +
Sbjct: 508 SRIVKEMLERGLPMDRITYNAL 529
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 78/148 (52%), Gaps = 1/148 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G+ P+ +Y+ LI C VE A ++++MR E P+V+ YT++IGG +GQ
Sbjct: 654 MKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQ 713
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A EM + +P+ Y I YC + A+ L+ +M E G+ P+ TYN+
Sbjct: 714 MDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNV 773
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLP 148
F +ND+ +++ + C M T LP
Sbjct: 774 LTNGFCKANDMDNAFKV-CDQMATEGLP 800
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 105/253 (41%), Gaps = 35/253 (13%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PD+ S+ +I+ CK ++E A ++ KM ISP+V++Y II GL G+ D A
Sbjct: 238 GACPDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNA 297
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF-- 122
++ ++M G P+ Y A I + ++DEM+ G +PN +N
Sbjct: 298 FELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDG 357
Query: 123 --------------RVFYWSNDLRSSWNLYCRMMG-------------------TGCLPN 149
V N +S LY M G +G +
Sbjct: 358 YCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIH 417
Query: 150 TQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFL 209
+C +V ++ + A + M+ + F L+ +L LC GK +EA + +
Sbjct: 418 PDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWF 477
Query: 210 EMIEKGHKPSQVS 222
++EKG S+V+
Sbjct: 478 RLLEKGSPASKVT 490
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 85/171 (49%)
Query: 11 VSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKE 70
+ YN +I +C++ V A +++E M+ + I P+ +Y+S+I G+ +G + A+ ++ E
Sbjct: 629 IVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDE 688
Query: 71 MKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSND 130
M++ G P+ Y A I YC ++ A EM+ + PN TY + + +
Sbjct: 689 MRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGN 748
Query: 131 LRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
+ + NL +M +G +P+ + L + ++ A ++ + M +G
Sbjct: 749 MEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGL 799
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 63/118 (53%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G P++V Y LI YCK Q++ A +M +I P+ +YT +I G +G
Sbjct: 689 MRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGN 748
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
+KA ++L +MKE G PD YN +C A + +A + D+M +GL + TY
Sbjct: 749 MEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITY 806
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 109/244 (44%), Gaps = 7/244 (2%)
Query: 4 MGVKPDIVSYNCLIDVY--CKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
+ + PD NC V+ CK + A++ + M + P + T ++ GL G+
Sbjct: 414 LSIHPD----NCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKH 469
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
+A ++ + E G NA I C A +L +AS ++ EM+E+GL + TYN
Sbjct: 470 LEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNAL 529
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
F + + L M G P+ + FL++ K++ A++LW++ G
Sbjct: 530 ILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGL 589
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEALQ 240
S I ++ + C ++ + E F E++ K + + + + IKA + N ALQ
Sbjct: 590 ISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQ 649
Query: 241 NLSN 244
L N
Sbjct: 650 LLEN 653
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 92/211 (43%), Gaps = 1/211 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G P + + N L+ K + EK ++ M E PDV S+T++I L G+ + A
Sbjct: 204 GTFPSLKTCNFLLSSLVKANEFEKCCEVFRVM-SEGACPDVFSFTNVINALCKGGKMENA 262
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++ +M++ G P+ YN I C RL +A L ++M KG+ PN TY
Sbjct: 263 IELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALING 322
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
N ++ M+G+G PN L+ + +E AL++ + M+ K
Sbjct: 323 LIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPT 382
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
+ L C ++ AE + E++ G
Sbjct: 383 SVTLYSLMQGFCKSDQIEHAENALEEILSSG 413
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 100/226 (44%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +P + L+ CKD + +A ++ ++ ++ ++ ++I GL G+
Sbjct: 444 MLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGK 503
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++KEM E G D YNA I +C ++ L +EM ++G+ P+ TYN
Sbjct: 504 LPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNF 563
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
R L + L+ +G + N + +++ + ++E L+N+++ K
Sbjct: 564 LLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKK 623
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+V +++ C G + A + M KG P+ ++ +
Sbjct: 624 MELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSL 669
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 95/222 (42%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ +I +Y +++ YCK ++E + ++ + + + I Y II G A
Sbjct: 588 GLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAA 647
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+L+ MK G P+ A Y++ I C + DA L+DEM ++G PN Y
Sbjct: 648 LQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGG 707
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + ++ + + M+ PN + ++ + +E A L M E G
Sbjct: 708 YCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPD 767
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ +VL + C + A K +M +G ++++ +
Sbjct: 768 VVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTL 809
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 37/54 (68%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGG 54
M+E G+ PD+V+YN L + +CK ++ A+K+ ++M E + D I+YT+++ G
Sbjct: 759 MKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHG 812
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 41/90 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + P+ +Y +ID YCK +EKA ++ KM++ I PDV++Y + G
Sbjct: 724 MISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKAND 783
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNY 90
D A V +M G D Y + +
Sbjct: 784 MDNAFKVCDQMATEGLPVDEITYTTLVHGW 813
>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
Length = 897
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 107/219 (48%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ PD+ +YN LI+ +CK+ V+KA +I E M + V++YT++I L GQ +
Sbjct: 651 GLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQET 710
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ E G PD YNA I ++ + + A +M EM +K ++P+ TYN R
Sbjct: 711 DKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRG 770
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + L M G P+ + L+ + V+ AL++ N+M+ KGF
Sbjct: 771 LCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPT 830
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+L + L LC G+ +AE EM+E G P ++
Sbjct: 831 LLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTY 869
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 120/252 (47%), Gaps = 9/252 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDE-DISPDVISYTSIIGGLGLVG 59
+R+M +P+ V+YN +I +C +V+ A I+ +MR+ I+P+ +Y ++I G VG
Sbjct: 506 LRQM-PRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVG 564
Query: 60 QPDKARDVLKEMKEYG-CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
+ D+A V EM G P+A YNA I YC +L A D MVE+G++ TY
Sbjct: 565 RVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATY 624
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
NL + ++ L M G G P+ + L+ ++ V+ AL+++ +M
Sbjct: 625 NLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSR 684
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEA 238
+G + ++ L L G++ E +K F E + +G +P V + L N
Sbjct: 685 RGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYN------ALINSHST 738
Query: 239 LQNLSNKMALFG 250
N+ + G
Sbjct: 739 SGNIDRAFEIMG 750
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 88/154 (57%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G++PD+V YN LI+ + +++A++I+ +M + I+PD ++Y +++ GL L+G+ D+A
Sbjct: 721 GIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEA 780
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
R ++ EM E G PD YN I Y + ++DA + +EM+ KG +P TYN +
Sbjct: 781 RKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQG 840
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK 158
+ + N+ M+ G P+ + + L++
Sbjct: 841 LCKNGQGDDAENMVKEMVENGITPDDSTYISLIE 874
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 120/255 (47%), Gaps = 5/255 (1%)
Query: 1 MREM----GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDE-DISPDVISYTSIIGGL 55
MREM G+ P+ +Y +I +CK +V++A K+ ++M + ++ P+ + Y ++IGG
Sbjct: 537 MREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGY 596
Query: 56 GLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNA 115
G+ D A M E G A YN + + R +A L++EM KGL+P+
Sbjct: 597 CDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDV 656
Query: 116 TTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWND 175
TYN+ +++ + ++ M G + L+ ++ +V+ +L+++
Sbjct: 657 FTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDE 716
Query: 176 MVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANK 235
V +G +++ + L + G + A + EM +K P V++ + + L +
Sbjct: 717 AVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGR 776
Query: 236 QEALQNLSNKMALFG 250
+ + L ++M G
Sbjct: 777 VDEARKLIDEMTERG 791
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 53/87 (60%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G++PD+V+YN LI Y V+ A +I +M ++ +P +++Y ++I GL GQ
Sbjct: 787 MTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQ 846
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAI 87
D A +++KEM E G PD + Y + I
Sbjct: 847 GDDAENMVKEMVENGITPDDSTYISLI 873
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 89/191 (46%), Gaps = 9/191 (4%)
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEK-GLSPNAT 116
G+P +A ++L++M P+A YN I +C R++ A +M EM E+ G++PN
Sbjct: 496 AGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQY 551
Query: 117 TYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMF--LVKLCKRQEKVEIALQLWN 174
TY + + + ++ M+ G + ++ M+ L+ Q K++ AL +
Sbjct: 552 TYGTVISGWCKVGRVDEAVKVFDEMLTKGEV-KPEAVMYNALIGGYCDQGKLDTALLYRD 610
Query: 175 DMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELA 233
MVE+G + ++L L G+ EA + EM KG P ++ I +
Sbjct: 611 RMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEG 670
Query: 234 NKQEALQNLSN 244
N ++AL+ N
Sbjct: 671 NVKKALEIFEN 681
Score = 44.3 bits (103), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 33/55 (60%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGL 55
M G P +++YN LI CK+ Q + A +V++M + I+PD +Y S+I GL
Sbjct: 822 MMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 876
>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
Length = 577
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 113/218 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + KPD+ +Y+ +ID CKD ++ A ++ +M+ ++I P++ +Y S+I GL +GQ
Sbjct: 194 MEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQ 253
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+K + +L EM P+ ++ I C ++ DA +M M+EKG+ P+ TY+
Sbjct: 254 WEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSA 313
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + ++ + G PN S L+ +++ + A+QL+ ++ +KG
Sbjct: 314 IMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKG 373
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
+ + L ++G++ +A+K F EM+ G P
Sbjct: 374 LKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTP 411
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 108/218 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + + P++ +++ LID CK+ +VE A +++ M ++ + PD+I+Y++I+ G L GQ
Sbjct: 264 MVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQ 323
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+AR V +++ G P+ +Y+ I YC K L A L E+ +KGL P+ TY+
Sbjct: 324 VDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYST 383
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + ++ M+ G P+ L+ + VE A+ L++ +
Sbjct: 384 ILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNR 443
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
+ I V+ + LC ++ EA F ++ G P
Sbjct: 444 EDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIP 481
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 113/250 (45%), Gaps = 9/250 (3%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDI-SPDVISYTSIIGGLGLVGQP 61
+ G+ ++V++N L+ + +V A + +K+ E I P+ + Y +++ GL G
Sbjct: 125 KTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREKICEPNEVMYGTVMNGLSKRGHT 184
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
+K +L+ M++ PD Y+ I C L A L++EM +K + PN TYN
Sbjct: 185 EKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSL 244
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKG 180
L M+ PN + L+ LCK + KVE A ++ M+EKG
Sbjct: 245 IDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCK-EGKVEDADEVMRHMIEKG 303
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
I+ + D C G++ A + F + +KG KP+ S+ L N +
Sbjct: 304 VEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSI------LINGYCKKK 357
Query: 241 NLSNKMALFG 250
NL+ M LFG
Sbjct: 358 NLAKAMQLFG 367
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 101/238 (42%), Gaps = 35/238 (14%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+R+ G+KP+I SY+ LI+ YCK + + KA ++ ++ + + PD ++Y++I+ GL VG+
Sbjct: 334 LRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGR 393
Query: 61 PDKARDVLKEMKEYGCYPD-----------------------------------AAAYNA 85
A+ + EM G PD + Y
Sbjct: 394 IGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTV 453
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
I C R+R+A + +++ GL P+ TYN+ F + +M G
Sbjct: 454 VINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNG 513
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVE 203
C N + +++ R K+ + +M +GF + VL ++L + +V+
Sbjct: 514 CPANNITYNVIMQGFFRSNKISEIVSFMKEMAGRGFSFDATTTGVLINVLKENPSIVD 571
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 116/253 (45%), Gaps = 2/253 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+RE +P+ V Y +++ K EK ++ M + PDV +Y+ +I L
Sbjct: 159 VREKICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDIN 218
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A ++L EMK+ P+ YN+ I C + L+ EMV ++PN T+++
Sbjct: 219 LDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSI 278
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + M+ G P+ + ++ + +V+ A +++N + +KG
Sbjct: 279 LIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKG 338
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI-KALMELANKQEAL 239
I +L + C L +A + F E+ +KG KP V++ I L+E+ +A
Sbjct: 339 IKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDA- 397
Query: 240 QNLSNKMALFGPS 252
+ + ++M GP+
Sbjct: 398 KKIFDEMLRVGPT 410
>gi|225436259|ref|XP_002275952.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Vitis vinifera]
Length = 566
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 121/222 (54%), Gaps = 11/222 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G++ D+VSY+ +I Y K + K K+ +M++ +I+PD Y +++ L
Sbjct: 281 MSNRGIQRDVVSYSSIISCYSKVTNLNKVLKLFNQMKEMEIAPDRKVYNAVVHALAKASF 340
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A +++K M+ G PD+ YN+ I+ A+++ +A + DEM+++GLSP TY+
Sbjct: 341 VKEALNLMKAMEGKGIAPDSVTYNSLIKPLSRARKINEAKEVFDEMLQRGLSPTIRTYHA 400
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
FFR+ ++ + L +M TGC P+ + + L++ R +++ +LW++M E G
Sbjct: 401 FFRILKSGEEV---FMLLEKMKETGCHPDKDTYIMLIRRFCRWRQLDNVFKLWSEMSENG 457
Query: 181 FG----SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
G SYI VL L GKL EA K ++EM EK P
Sbjct: 458 VGPDRSSYI----VLIHGLFLNGKLEEAYKYYIEMKEKQFLP 495
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 77/152 (50%), Gaps = 3/152 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ PD V+YN LI + R++ +A ++ ++M +SP + +Y + ++
Sbjct: 351 MEGKGIAPDSVTYNSLIKPLSRARKINEAKEVFDEMLQRGLSPTIRTYHAF---FRILKS 407
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++ +L++MKE GC+PD Y IR +C ++L + L EM E G+ P+ ++Y +
Sbjct: 408 GEEVFMLLEKMKETGCHPDKDTYIMLIRRFCRWRQLDNVFKLWSEMSENGVGPDRSSYIV 467
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS 152
+ + L ++ Y M LP ++
Sbjct: 468 LIHGLFLNGKLEEAYKYYIEMKEKQFLPEPKT 499
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 53/121 (43%), Gaps = 3/121 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ P I +Y+ + + E+ + ++EKM++ PD +Y +I Q
Sbjct: 386 MLQRGLSPTIRTYHAFFRIL---KSGEEVFMLLEKMKETGCHPDKDTYIMLIRRFCRWRQ 442
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D + EM E G PD ++Y I + +L +A EM EK P T ++
Sbjct: 443 LDNVFKLWSEMSENGVGPDRSSYIVLIHGLFLNGKLEEAYKYYIEMKEKQFLPEPKTEDM 502
Query: 121 F 121
Sbjct: 503 L 503
>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 833
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 107/226 (47%), Gaps = 4/226 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKM--RDEDISPDVISYTSIIGGLGLV 58
M E+GV+PD +SYN ++ C+D + ++A ++ M + SP+V++Y ++I GL
Sbjct: 181 MPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHGLFRE 240
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
G+ KA ++ EM + G PD Y + I C A+ + A ++ +M+ G PN TY
Sbjct: 241 GEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPNKVTY 300
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSC-MFLVKLCKRQEKVEIALQLWNDMV 177
N + S + + ++ M G +PN +C ++ LCK + E A + ++ M
Sbjct: 301 NCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAA-EFFDSMA 359
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
KG ++ VL G V+ F M G Q F
Sbjct: 360 AKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVF 405
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 104/226 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV PD+V+Y +ID CK R ++KA ++ +M P+ ++Y +I G + GQ
Sbjct: 253 MMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPNKVTYNCMIHGYSISGQ 312
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ + +EM G P+ N+ + + C + ++A+ D M KG PN TY++
Sbjct: 313 WKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSV 372
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ NL+ M G G + + + ++ ++ ++ + ++ M E+G
Sbjct: 373 LLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQG 432
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ MG+L +A F +MI G KP + + +
Sbjct: 433 VIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSL 478
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 114/234 (48%), Gaps = 3/234 (1%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
+P+IV +N +I+ CK+ +V +A+ I + + PDVI++ S+I G GLVG+ +KA
Sbjct: 505 RPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFG 564
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
VL M G PD +YN I YC R+ D L EM+ KG+ P TY + +
Sbjct: 565 VLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLF 624
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSC-MFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ + M+ +G + +C + L LC+ E A+ ++ + I
Sbjct: 625 NDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDE-AIAMFKKLGAMNVKFNI 683
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEA 238
+ + + D + + K EA++ F + G P+ ++ IK L++ + +EA
Sbjct: 684 AIINTMIDAMYKVRKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEA 737
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 110/245 (44%), Gaps = 1/245 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G P++V+YN +I ++ +V KA + +M + + PDV++YTSII L DKA
Sbjct: 222 GCSPNVVTYNTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKA 281
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
VL++M G P+ YN I Y I+ + ++ +G+ EM +GL PN T N +
Sbjct: 282 ELVLRQMISNGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSS 341
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + + M G PN + L+ + L L+N M G +
Sbjct: 342 LCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVAD 401
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEALQNLS 243
V +++ D G + E F +M E+G P ++ I A + +A+ +
Sbjct: 402 QRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFN 461
Query: 244 NKMAL 248
+A+
Sbjct: 462 QMIAM 466
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 108/254 (42%), Gaps = 38/254 (14%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P + +YN L+D C+ R+ + + + + DVI + ++ L + D ++
Sbjct: 117 PTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLKCLYHAKRSDDVVNL 176
Query: 68 L-KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEK--GLSPNATTYNLFFRV 124
L M E G PD +YN ++ C R + A L+ MV+K G SPN TYN
Sbjct: 177 LLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHG 236
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQ--EKVEIALQ---------- 171
+ ++ + NL+ MM G +P+ + ++ LCK + +K E+ L+
Sbjct: 237 LFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPN 296
Query: 172 ----------------------LWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFL 209
++ +M +G I+ + LC GK EA + F
Sbjct: 297 KVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFD 356
Query: 210 EMIEKGHKPSQVSF 223
M KGHKP+ V++
Sbjct: 357 SMAAKGHKPNLVTY 370
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 95/229 (41%), Gaps = 5/229 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G KP++V+Y+ L+ Y + + M I D + +I G G
Sbjct: 358 MAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGM 417
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+ + +M+E G PDA Y I + RL DA ++M+ GL P Y+
Sbjct: 418 MDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHS 477
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMF---LVKLCKRQEKVEIALQLWNDMV 177
+ F +L + L MM G +P F + LCK VE A +++ ++
Sbjct: 478 LIQGFCMHGNLVKAKELVSEMMSRG-IPRPNIVFFNSIINSLCKEGRVVE-AHDIFDFVI 535
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G ++ + L D +GK+ +A MI G +P VS+ +
Sbjct: 536 HIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTL 584
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 86/194 (44%), Gaps = 35/194 (18%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G++PD+VSYN LID YC++ +++ + +M + + P I+Y I+ GL G+
Sbjct: 569 MISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGR 628
Query: 61 PDKARDVLKEMKEYGCYPDAAA------------------------------YNAAIRNY 90
A+ + EM E G D + +N AI N
Sbjct: 629 TVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINT 688
Query: 91 CI-----AKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
I ++ +A L D + GL PNA+TY + + + + N++ M +G
Sbjct: 689 MIDAMYKVRKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKSG 748
Query: 146 CLPNTQSCMFLVKL 159
C P+++ +++++
Sbjct: 749 CAPSSRLLNYIIRV 762
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 101/230 (43%), Gaps = 4/230 (1%)
Query: 1 MREM---GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGL 57
+R+M G +P+ V+YNC+I Y Q ++ + +M + + P++++ S + L
Sbjct: 285 LRQMISNGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCK 344
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
G+ +A + M G P+ Y+ + Y D L + M G+ +
Sbjct: 345 HGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRV 404
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
+N+ + + + ++ +M G +P+ + ++ R ++ A+ +N M+
Sbjct: 405 FNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMI 464
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG-HKPSQVSFRRI 226
G +V L C G LV+A++ EM+ +G +P+ V F I
Sbjct: 465 AMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSI 514
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 92/218 (42%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
+G +PD++++N LID Y ++EKA+ +++ M I PDV+SY ++I G G+ D
Sbjct: 536 HIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRID 595
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
+ EM G P Y + R A + EM+E G + + +T +
Sbjct: 596 DGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIIL 655
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
+N + ++ ++ N ++ + K E A +L++ + G
Sbjct: 656 GGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAKELFDSISATGLV 715
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQ 220
V+ L G + EA+ F M + G PS
Sbjct: 716 PNASTYGVMIKNLLKEGSVEEADNMFSLMEKSGCAPSS 753
>gi|297746072|emb|CBI16128.3| unnamed protein product [Vitis vinifera]
Length = 563
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 115/226 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G+ P++ +YN +I C D ++ A+++ ++MR+ ++ +V++Y ++IGGL +
Sbjct: 260 MKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERR 319
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++ MK G P+ +YN I YC L AS L ++M G SP+ TYN+
Sbjct: 320 VLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNI 379
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + + ++ M G P+ + L+ R + +E A Q+++ M + G
Sbjct: 380 LIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAG 439
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ I + VL LC +G + EA K F + E KP+ V + +
Sbjct: 440 LVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTM 485
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 118/254 (46%), Gaps = 35/254 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MRE GV ++V+YN LI C++R+V +A +++ +M+ + +SP++ISY ++I G +G
Sbjct: 295 MRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGN 354
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA + +MK G P A YN I + AK + ++ EM +GLSP+ TY +
Sbjct: 355 LDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTI 414
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-------------KLCKRQEKVE 167
S+++ ++ +Y M G + + L+ KL K +++
Sbjct: 415 LMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMH 474
Query: 168 I----------------------ALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
+ AL+L +M E G + + +LC K EAE
Sbjct: 475 LKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILCKDEKWTEAE 534
Query: 206 KSFLEMIEKGHKPS 219
+MIE G KPS
Sbjct: 535 VLLKDMIELGLKPS 548
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 110/241 (45%), Gaps = 1/241 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M EMG+ P++V Y LID CK+ +E+ ++ KM + D+ + +YT +I G +G
Sbjct: 190 MEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGL 249
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++ ++MK G P+ YN+ I C +L +A L DEM E+G++ N TYN
Sbjct: 250 KKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNT 309
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + L CRM G PN S L+ ++ A L+N M G
Sbjct: 310 LIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSG 369
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI-KALMELANKQEAL 239
+ ++L + EM +G PS+V++ + AL+ N ++A
Sbjct: 370 QSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAF 429
Query: 240 Q 240
Q
Sbjct: 430 Q 430
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 114/249 (45%), Gaps = 3/249 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ P ++N L+ + K EKA+++ + + ++ DV S+ +I G VG DK
Sbjct: 125 GLVPGSNTFNNLLILLIKSNFFEKAWRVFNETKG-NVKLDVYSFGIMIKGCCEVGYLDKG 183
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+VL +M+E G P+ Y I C + L +M E + N TY +
Sbjct: 184 FEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLING 243
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
F+ + LY +M TG +PN + ++ C K+ A +L+++M E+G
Sbjct: 244 FFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACN 303
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLS 243
++ + L LC +++EAE+ M G P+ +S+ I + N +A +L
Sbjct: 304 VVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKA-SSLF 362
Query: 244 NKMALFGPS 252
N+M G S
Sbjct: 363 NQMKSSGQS 371
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 81/197 (41%), Gaps = 4/197 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G P + +YN LI + + + +V +M +SP ++YT ++ L
Sbjct: 365 MKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDN 424
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA + M++ G D Y I C+ +++AS L + E L PN YN
Sbjct: 425 IEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNT 484
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + L M G +PN S +++ + EK A L DM+E G
Sbjct: 485 MIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILCKDEKWTEAEVLLKDMIELG 544
Query: 181 FGSYI----LVSDVLFD 193
I ++S FD
Sbjct: 545 LKPSISIWNMISKARFD 561
Score = 44.3 bits (103), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 79/186 (42%), Gaps = 6/186 (3%)
Query: 77 YPDAAAYNAAIRNYCIAKRL-RDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSW 135
+P + AI N + +L A ++M+ +GL P + T+N + SN +W
Sbjct: 91 FPTHVLIHEAIINAHVRSQLPEQALFYFNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAW 150
Query: 136 NLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLL 195
++ G L + S ++K C ++ ++ M E G ++V L D
Sbjct: 151 RVFNETKGNVKL-DVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGC 209
Query: 196 CDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEALQNLSNKMALFGPSMI 254
C G + ++ F +M E +Q ++ I ++ K++ ++ L KM L G ++
Sbjct: 210 CKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIE-LYEKMKLTG--IV 266
Query: 255 PKREEY 260
P Y
Sbjct: 267 PNVYTY 272
>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
Length = 1099
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 132/257 (51%), Gaps = 4/257 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E G +P++ +Y LID CK+ ++++A K++ +M ++ + P V++Y ++I G G
Sbjct: 325 MKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGM 384
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A ++L M+ C P+ YN I C +++ A L+++M+E+ LSP+ TYN
Sbjct: 385 IDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNS 444
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEK 179
NDL S++ L M G +P+ + +F+ LCK + +VE A L++ + K
Sbjct: 445 LIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCK-EGRVEEAGTLFDSVKAK 503
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
G + ++ L D C +GK+ A M+ P+ ++ + + K +
Sbjct: 504 GVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEA 563
Query: 240 QNLSNKMALFG--PSMI 254
+L KM G P+++
Sbjct: 564 SSLVAKMLTMGVKPTVV 580
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 109/224 (48%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G + + VSY LI C+ ++ +A K+ M +++ P V +YT +I L G+
Sbjct: 255 MPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGR 314
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++ EMKE GC P+ Y I C ++ +A ++ EM EKGL P+ TYN
Sbjct: 315 KVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNA 374
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEK 179
+ + ++ + M C PNT++ L+ LCK++ KV A+ L N M+E+
Sbjct: 375 LIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKR-KVHKAMALLNKMLER 433
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + L C + L A + M E G P Q ++
Sbjct: 434 KLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTY 477
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 102/216 (47%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P+ +YN LI CK R+V KA ++ KM + +SP +I+Y S+I G V + A +
Sbjct: 402 PNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRL 461
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L M E G PD Y+ I C R+ +A L D + KG+ N Y +
Sbjct: 462 LSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCK 521
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ +++L RM+ CLPN+ + L++ +++K++ A L M+ G ++
Sbjct: 522 VGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVT 581
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+L + G A K F M+ G++P ++
Sbjct: 582 YTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTY 617
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 99/223 (44%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E + P +++YN LI CK +E AY+++ M + + PD +Y+ I L G+
Sbjct: 430 MLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGR 489
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A + +K G + Y A I YC ++ A L++ M+ PN+ TYN+
Sbjct: 490 VEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNV 549
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++ + +L +M+ G P + L+ + + AL+++N MV G
Sbjct: 550 LIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLG 609
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + G L E + +M E+G P V++
Sbjct: 610 YQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTY 652
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 93/221 (42%), Gaps = 35/221 (15%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ P+I ++N +++ YCK V +A K+ + PD +YTS+I G D A
Sbjct: 190 ISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAY 249
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+V M + GC + +Y I C A R+ +A L +M E P TY +
Sbjct: 250 EVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYA- 308
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ G+G KVE AL L+N+M EKG +
Sbjct: 309 ---------------LSGSG------------------RKVE-ALNLFNEMKEKGCEPNV 334
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
VL D LC K+ EA K EM EKG PS V++ +
Sbjct: 335 HTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNAL 375
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 102/224 (45%), Gaps = 6/224 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G +PD+ +Y + Y +E+ ++ KM +E I PD+++YT +I G +G
Sbjct: 605 MVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGL 664
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A D LK M + GC P + I+N R+++ E G+ + ++
Sbjct: 665 THRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRS------EIGIDSVSNVNSV 718
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + + L+ +M+ GC + L+ +QE++E A L + M E+G
Sbjct: 719 DIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERG 778
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
+ + L D C +G EA + M+E G P S++
Sbjct: 779 MSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYK 822
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 95/220 (43%), Gaps = 6/220 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M MGVKP +V+Y LI KD + A K+ M PDV +YT+ + G
Sbjct: 570 MLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGM 629
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++ DV+ +M E G PD Y I Y A + MV+ G P+ ++
Sbjct: 630 LEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSI 689
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ N ++ + + +G + N S + + + K E EIAL+L+ MVE G
Sbjct: 690 LIKNLSHENRMKETRS----EIGIDSVSNVNS-VDIADVWKTLE-YEIALKLFEKMVEHG 743
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQ 220
+ + L C +L EA+ M E+G PS+
Sbjct: 744 CTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSE 783
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 54/111 (48%), Gaps = 1/111 (0%)
Query: 16 LIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYG 75
+ DV+ K + E A K+ EKM + + DV Y ++I G + ++A+ ++ MKE G
Sbjct: 720 IADVW-KTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERG 778
Query: 76 CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
P YN+ + C +A L+D MVE GL P +Y L Y
Sbjct: 779 MSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLY 829
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 54/115 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E G+ P YN L+D CK +A ++V+ M + + P + SY ++ GL + G
Sbjct: 774 MKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGS 833
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNA 115
+KA+ V + G D A+ I + + S L+D M EK + A
Sbjct: 834 NEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKDATAQA 888
>gi|147784915|emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]
Length = 550
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 115/226 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G+ P++ +YN +I C D ++ A+++ ++MR+ ++ +V++Y ++IGGL +
Sbjct: 247 MKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERR 306
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++ MK G P+ +YN I YC L AS L ++M G SP+ TYN+
Sbjct: 307 VLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNI 366
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + + ++ M G P+ + L+ R + +E A Q+++ M + G
Sbjct: 367 LIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAG 426
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ I + VL LC +G + EA K F + E KP+ V + +
Sbjct: 427 LVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTM 472
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 118/254 (46%), Gaps = 35/254 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MRE GV ++V+YN LI C++R+V +A +++ +M+ + +SP++ISY ++I G +G
Sbjct: 282 MRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGN 341
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA + +MK G P A YN I + AK + ++ EM +GLSP+ TY +
Sbjct: 342 LDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTI 401
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-------------KLCKRQEKVE 167
S+++ ++ +Y M G + + L+ KL K +++
Sbjct: 402 LMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMH 461
Query: 168 I----------------------ALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
+ AL+L +M E G + + +LC K EAE
Sbjct: 462 LKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIXILCKDEKWTEAE 521
Query: 206 KSFLEMIEKGHKPS 219
+MIE G KPS
Sbjct: 522 VLLKDMIELGLKPS 535
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 110/241 (45%), Gaps = 1/241 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M EMG+ P++V Y LID CK+ +E+ ++ KM + D+ + +YT +I G +G
Sbjct: 177 MEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGL 236
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++ ++MK G P+ YN+ I C +L +A L DEM E+G++ N TYN
Sbjct: 237 KKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNT 296
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + L CRM G PN S L+ ++ A L+N M G
Sbjct: 297 LIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSG 356
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI-KALMELANKQEAL 239
+ ++L + EM +G PS+V++ + AL+ N ++A
Sbjct: 357 QSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAF 416
Query: 240 Q 240
Q
Sbjct: 417 Q 417
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 114/249 (45%), Gaps = 3/249 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ P ++N L+ + K EKA+++ + + ++ DV S+ +I G VG DK
Sbjct: 112 GLVPGSNTFNNLLILLIKSNFFEKAWRVFNETKG-NVKLDVYSFGIMIKGCCEVGYLDKG 170
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+VL +M+E G P+ Y I C + L +M E + N TY +
Sbjct: 171 FEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLING 230
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
F+ + LY +M TG +PN + ++ C K+ A +L+++M E+G
Sbjct: 231 FFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACN 290
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLS 243
++ + L LC +++EAE+ M G P+ +S+ I + N +A +L
Sbjct: 291 VVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKA-SSLF 349
Query: 244 NKMALFGPS 252
N+M G S
Sbjct: 350 NQMKSSGQS 358
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 80/197 (40%), Gaps = 4/197 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G P + +YN LI + + + +V +M +SP ++YT ++ L
Sbjct: 352 MKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDN 411
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA + M++ G D Y I C+ +++AS L + E L PN YN
Sbjct: 412 IEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNT 471
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + L M G +PN S + + + EK A L DM+E G
Sbjct: 472 MIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIXILCKDEKWTEAEVLLKDMIELG 531
Query: 181 FGSYI----LVSDVLFD 193
I ++S FD
Sbjct: 532 LKPSISIWNMISKARFD 548
Score = 44.3 bits (103), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 79/186 (42%), Gaps = 6/186 (3%)
Query: 77 YPDAAAYNAAIRNYCIAKRL-RDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSW 135
+P + AI N + +L A ++M+ +GL P + T+N + SN +W
Sbjct: 78 FPTHVLIHEAIINAHVRSQLPEQALFYXNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAW 137
Query: 136 NLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLL 195
++ G L + S ++K C ++ ++ M E G ++V L D
Sbjct: 138 RVFNETKGNVKL-DVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGC 196
Query: 196 CDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEALQNLSNKMALFGPSMI 254
C G + ++ F +M E +Q ++ I ++ K++ ++ L KM L G ++
Sbjct: 197 CKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIE-LYEKMKLTG--IV 253
Query: 255 PKREEY 260
P Y
Sbjct: 254 PNVYTY 259
>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
Length = 564
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 112/228 (49%), Gaps = 5/228 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDV-----ISYTSIIGGL 55
M + GV PD+++Y+ L+D +CK +V++A +++ M +P+V +++ +I G
Sbjct: 242 MVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGA 301
Query: 56 GLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNA 115
G ++A + +EM PD + A I C A ++ A ++D M G+ PN
Sbjct: 302 CKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNV 361
Query: 116 TTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWND 175
TYN S + + M+ +GC+P++ + LV R + + ALQL ++
Sbjct: 362 VTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSE 421
Query: 176 MVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ G+ + ++L D L GK +A EM+ KGH+P +F
Sbjct: 422 LKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTF 469
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 122/246 (49%), Gaps = 10/246 (4%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDED--ISPDVISYTSIIGGLGLVGQPDK 63
V P+I++YN +D CK +A +++ +RD +SPD ++++++I GL GQ D+
Sbjct: 140 VLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDE 199
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
A V +M G P+ YNA + C A ++ A +++ MV+KG++P+ TY++
Sbjct: 200 ACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVD 259
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNT-----QSCMFLVKLCKRQEKVEIALQLWNDMVE 178
F ++ + + L M GC PN + L+ + E A L+ +MV
Sbjct: 260 AFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVA 319
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEK-GHKPSQVSFRR-IKALMELANKQ 236
K ++ L D LC G+ VEA + L+++ G P+ V++ + L + +
Sbjct: 320 KNLQPDVMTFGALIDGLCKAGQ-VEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIE 378
Query: 237 EALQNL 242
EA Q L
Sbjct: 379 EACQFL 384
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 127/269 (47%), Gaps = 11/269 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV P IV+YN +I+ CK + ++ E++ + PDV++Y ++I L G
Sbjct: 28 MARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGD 87
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKG--LSPNATTY 118
++AR + +M GC P+ Y+ I C R+ +A L+ EM K + PN TY
Sbjct: 88 LEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITY 147
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCL---PNTQSCMFLVKLCKRQEKVEIALQLWND 175
N F + + L R + G L P+T + L+ + +++ A +++D
Sbjct: 148 NSFLDGLCKQSMTAEACELM-RSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDD 206
Query: 176 MVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELAN 234
M+ G+ ++ + L + LC K+ A M++KG P +++ + A + +
Sbjct: 207 MIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASR 266
Query: 235 KQEALQNLSNKMALFGPS---MIPKREEY 260
EAL+ L + MA G + ++P + +
Sbjct: 267 VDEALE-LLHGMASRGCTPNVLVPDKVTF 294
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 120/251 (47%), Gaps = 7/251 (2%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
V PD V+++ LID CK Q+++A + + M P+VI+Y +++ GL + ++A
Sbjct: 177 VSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAH 236
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNA-----TTYNL 120
+++ M + G PD Y+ + +C A R+ +A L+ M +G +PN T+N+
Sbjct: 237 AMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNI 296
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + L+ M+ P+ + L+ + +VE A + + M G
Sbjct: 297 LIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLG 356
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
++ + L LC G++ EA + EM+ G P +++ + AL + +AL
Sbjct: 357 VPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDAL 416
Query: 240 QNLSNKMALFG 250
Q L +++ FG
Sbjct: 417 Q-LVSELKSFG 426
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 95/196 (48%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
++PD++++ LID CK QVE A I++ M + + P+V++Y +++ GL G+ ++A
Sbjct: 322 LQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEAC 381
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
L+EM GC PD+ Y + + C A R DA L+ E+ G P+ TYN+
Sbjct: 382 QFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGL 441
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ S + + M+G G P++ + R + ++L ++ KG
Sbjct: 442 WKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAKGMLPDA 501
Query: 186 LVSDVLFDLLCDMGKL 201
+ D +C GKL
Sbjct: 502 TTCSSILDWVCRSGKL 517
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 86/167 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +GV P++V+YN L+ CK ++E+A + +E+M PD I+Y S++ L +
Sbjct: 352 MGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASR 411
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A ++ E+K +G PD YN + + + A +++EMV KG P++ T+
Sbjct: 412 TDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAA 471
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVE 167
F + S +L + L ++ G LP+ +C ++ R K++
Sbjct: 472 CFSGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILDWVCRSGKLD 518
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 109/246 (44%), Gaps = 13/246 (5%)
Query: 10 IVSYNCLIDVYCKDRQVEKAYKIVE-KMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
+ YN ++ C+ +A +I +M + ++P +++Y +II GL ++
Sbjct: 1 VADYNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELF 60
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
+E+ E G +PD YN I + C A L +A L +M +G PN TY++
Sbjct: 61 EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKV 120
Query: 129 NDLRSSWNLYCRMMGTGC--LPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ + L M C LPN + FL LCK+ E A +L + + GS
Sbjct: 121 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAE-ACELMRSLRD---GSLR 176
Query: 186 LVSD-----VLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ D L D LC G++ EA F +MI G+ P+ +++ + + A+K E
Sbjct: 177 VSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAH 236
Query: 241 NLSNKM 246
+ M
Sbjct: 237 AMIESM 242
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 51/105 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
++ G PD V+YN L+D K + E+A ++E+M + PD ++ + GL G
Sbjct: 422 LKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGN 481
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDE 105
++L+ + G PDA ++ + C + +L D ++ E
Sbjct: 482 LAGTMELLRVVLAKGMLPDATTCSSILDWVCRSGKLDDVKAMIKE 526
>gi|115475535|ref|NP_001061364.1| Os08g0248400 [Oryza sativa Japonica Group]
gi|113623333|dbj|BAF23278.1| Os08g0248400, partial [Oryza sativa Japonica Group]
Length = 440
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 104/204 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+ PD+V+YN ++ CK + ++KA ++ +M + PD I+Y SI+ G GQ
Sbjct: 232 MLERGILPDVVTYNTIVAALCKAQAMDKAMDVLNRMVKNGVMPDCITYNSIVHGYCSSGQ 291
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A +L++M G PDA Y + + C R +A ++D M+++GL PN TY+
Sbjct: 292 SKEAIGILEKMCSDGVEPDAVTYTSLMDYLCKNGRCIEARKILDSMIKRGLKPNVITYST 351
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L +L M+ G P+ L+ C + + V++A+ +++ M ++
Sbjct: 352 LLHGYATKGALVEMRDLLDLMVRNGIQPDRHVFSILICACTKHQNVDVAMFVFSKMRQQR 411
Query: 181 FGSYILVSDVLFDLLCDMGKLVEA 204
++ L D LC G++ +A
Sbjct: 412 LTPDVVTYGTLIDGLCKSGRVDDA 435
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 108/226 (47%), Gaps = 4/226 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDE--DISPDVISYTSIIGGLGLV 58
M E+G P + SYN L+ C + + ++A +++ M D+ D PDV+SY++II GL
Sbjct: 160 MTELGCAPHVFSYNILLKGLCHESRSQEALELLHMMADDGGDCPPDVVSYSTIIDGLFKE 219
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
G DKA EM E G PD YN + C A+ + A +++ MV+ G+ P+ TY
Sbjct: 220 GDSDKAYSTYHEMLERGILPDVVTYNTIVAALCKAQAMDKAMDVLNRMVKNGVMPDCITY 279
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMV 177
N + S + + + +M G P+ + L+ LCK +E A ++ + M+
Sbjct: 280 NSIVHGYCSSGQSKEAIGILEKMCSDGVEPDAVTYTSLMDYLCKNGRCIE-ARKILDSMI 338
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++G ++ L G LVE M+ G +P + F
Sbjct: 339 KRGLKPNVITYSTLLHGYATKGALVEMRDLLDLMVRNGIQPDRHVF 384
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 110/257 (42%), Gaps = 40/257 (15%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
V P + +Y LI C+ +++ + + + + + I +T ++ L + A
Sbjct: 94 VTPTLHTYGILIGCCCRAGRLDLGFAGLGNVIKKGYRVEPIIFTPLLKSLCAEKRTSNAM 153
Query: 66 D-VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKG--LSPNATTYNLFF 122
+ VL+ M E GC P +YN ++ C R ++A L+ M + G P+ +Y+
Sbjct: 154 NIVLRRMTELGCAPHVFSYNILLKGLCHESRSQEALELLHMMADDGGDCPPDVVSYSTII 213
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEKG- 180
+ D +++ Y M+ G LP+ + +V LCK Q ++ A+ + N MV+ G
Sbjct: 214 DGLFKEGDSDKAYSTYHEMLERGILPDVVTYNTIVAALCKAQA-MDKAMDVLNRMVKNGV 272
Query: 181 ------FGSYI------------------LVSD----------VLFDLLCDMGKLVEAEK 206
+ S + + SD L D LC G+ +EA K
Sbjct: 273 MPDCITYNSIVHGYCSSGQSKEAIGILEKMCSDGVEPDAVTYTSLMDYLCKNGRCIEARK 332
Query: 207 SFLEMIEKGHKPSQVSF 223
MI++G KP+ +++
Sbjct: 333 ILDSMIKRGLKPNVITY 349
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 36/192 (18%), Positives = 82/192 (42%), Gaps = 3/192 (1%)
Query: 38 DEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLR 97
D ++P + +Y +IG G+ D L + + G + + +++ C KR
Sbjct: 91 DGAVTPTLHTYGILIGCCCRAGRLDLGFAGLGNVIKKGYRVEPIIFTPLLKSLCAEKRTS 150
Query: 98 DASGL-MDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMM--GTGCLPNTQSCM 154
+A + + M E G +P+ +YN+ + + + + L M G C P+ S
Sbjct: 151 NAMNIVLRRMTELGCAPHVFSYNILLKGLCHESRSQEALELLHMMADDGGDCPPDVVSYS 210
Query: 155 FLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEK 214
++ ++ + A +++M+E+G ++ + + LC + +A M++
Sbjct: 211 TIIDGLFKEGDSDKAYSTYHEMLERGILPDVVTYNTIVAALCKAQAMDKAMDVLNRMVKN 270
Query: 215 GHKPSQVSFRRI 226
G P +++ I
Sbjct: 271 GVMPDCITYNSI 282
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 72/180 (40%), Gaps = 11/180 (6%)
Query: 78 PDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNL 137
P Y I C A RL + +++KG + + ++ N+
Sbjct: 96 PTLHTYGILIGCCCRAGRLDLGFAGLGNVIKKGYRVEPIIFTPLLKSLCAEKRTSNAMNI 155
Query: 138 YCRMMGT-GCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG------FGSYILVSDV 190
R M GC P+ S L+K + + + AL+L + M + G SY + D
Sbjct: 156 VLRRMTELGCAPHVFSYNILLKGLCHESRSQEALELLHMMADDGGDCPPDVVSYSTIIDG 215
Query: 191 LFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFG 250
LF G +A ++ EM+E+G P V++ I A + A + ++ N+M G
Sbjct: 216 LFK----EGDSDKAYSTYHEMLERGILPDVVTYNTIVAALCKAQAMDKAMDVLNRMVKNG 271
>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
Length = 816
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 116/224 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ PD+V+Y+ ++ CK R ++KA + +M ++ + PD +Y ++I G GQ
Sbjct: 247 MVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQ 306
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A V KEM+ PD A N + + C ++++A + D M KG +P+ +Y +
Sbjct: 307 WKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTI 366
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L +L+ M+G G P+ + L+K ++ A+ ++N+M + G
Sbjct: 367 MLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHG 426
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
+++ + LC +GK+ +A + F +MI++G P + ++
Sbjct: 427 VKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYH 470
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 106/215 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ GVKP +V+Y +I C+ +++ A + +M D+ + PD +Y +I G G
Sbjct: 422 MRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGS 481
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA++++ E+ G D + + I N C R+ DA + D V GL P+A YN+
Sbjct: 482 LLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNM 541
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + ++ M+ G PN LV + +++ L L+ +M++KG
Sbjct: 542 LMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKG 601
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
++ +++ D L + G+ V A+ F EM E G
Sbjct: 602 IKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESG 636
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 105/224 (46%), Gaps = 4/224 (1%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDI--SPDVISYTSIIGGLGLVGQ 60
E+G PD+ SYN L+ C + +A ++ M + SPDV++Y ++I G G
Sbjct: 177 ELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGD 236
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA D+ KEM + G PD Y++ + C A+ + A + +MV KG+ P+ TYN
Sbjct: 237 VNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNN 296
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEK 179
+ + + + ++ M LP+ + L+ LCK K++ A +++ M K
Sbjct: 297 LIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCK-YGKIKEARDVFDTMAMK 355
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G + ++ + G LV+ F M+ G P +F
Sbjct: 356 GQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTF 399
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 103/237 (43%), Gaps = 2/237 (0%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
+G+ PD V YN L+D YC ++EKA ++ + M I P+V+ Y +++ G +G+ D+
Sbjct: 530 VGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDE 589
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
+ +EM + G P YN I A R A EM E G++ N TY++ R
Sbjct: 590 GLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLR 649
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
+ + + L+ + + + ++ + +VE A L+ + G
Sbjct: 650 GLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVP 709
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ ++ L G + EAE F M G +P + + EL K E ++
Sbjct: 710 CAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRLLNHV--VRELLKKNEIVR 764
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 100/223 (44%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR + PD+V+ N L+ CK ++++A + + M + +PDV SYT ++ G G
Sbjct: 317 MRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGC 376
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+ M G PD +N I+ Y L A + +EM + G+ P+ TY
Sbjct: 377 LVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMT 436
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + +M+ G +P+ + L++ + A +L ++++ G
Sbjct: 437 VIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNG 496
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I+ + + LC +G++++A+ F + G P V +
Sbjct: 497 MRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVY 539
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 94/235 (40%), Gaps = 37/235 (15%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G++P++V Y L++ YCK ++++ + +M + I P I Y II GL G+
Sbjct: 562 MVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGR 621
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIR----NYCI------------------------ 92
A+ EM E G + Y+ +R N C
Sbjct: 622 TVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNT 681
Query: 93 -------AKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
+R+ +A L + GL P A TY++ + + +++ M G
Sbjct: 682 MIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAG 741
Query: 146 CLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMG 199
C P+++ +V+ L K+ E V L + + E+ F L + +L DL G
Sbjct: 742 CEPDSRLLNHVVRELLKKNEIVRAGAYL-SKIDERNFSLEHLTAMLLVDLFSSKG 795
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 100/256 (39%), Gaps = 38/256 (14%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ P +Y L+D + + E A ++ + D I + ++ G + D+A
Sbjct: 109 LSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEAL 168
Query: 66 DV-LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGL--SPNATTYNLFF 122
D+ L E GC PD +YN +++ C + A L+ M E G SP+ YN
Sbjct: 169 DILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVI 228
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQ--EKVEI----------- 168
F+ D+ + +L+ M+ G P+ + +V LCK + +K E
Sbjct: 229 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL 288
Query: 169 ---------------------ALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKS 207
A++++ +M + ++ + L LC GK+ EA
Sbjct: 289 PDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDV 348
Query: 208 FLEMIEKGHKPSQVSF 223
F M KG P S+
Sbjct: 349 FDTMAMKGQNPDVFSY 364
>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
sativus]
Length = 686
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 119/252 (47%), Gaps = 12/252 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E + PD+V+++ LI+ + K+ + +A ++ ++M I P ++Y+S+I G +
Sbjct: 314 MLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNR 373
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A + GC PD +N I YC AKR+ D L+ EM E GL N TY
Sbjct: 374 LDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTT 433
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE-- 178
F DL ++ +L M+ +G PN +C L+ K++ AL+++ M +
Sbjct: 434 LIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 493
Query: 179 ---------KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKA 228
G + ++L L + GK +EAE+ + EM +G P +++ I
Sbjct: 494 MDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 553
Query: 229 LMELANKQEALQ 240
L + + EA Q
Sbjct: 554 LCKQSRLDEATQ 565
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 109/217 (50%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ P++V YN +ID KD + A+ + +M++++I PD+++Y +I G + G+ A
Sbjct: 249 IIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAE 308
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+L+EM E PD ++A I + + +A L DEM+ + + P+ TY+ F
Sbjct: 309 QLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGF 368
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
N L ++ +++ GC P+ + L+ R ++V+ ++L ++M E G +
Sbjct: 369 CKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANT 428
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
+ L C +G L A+ EMI G P+ V+
Sbjct: 429 ITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVT 465
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 109/230 (47%), Gaps = 11/230 (4%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PDI+++N LI YC+ ++V+ K++ +M + + + I+YT++I G VG + A
Sbjct: 388 GCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAA 447
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVE-----------KGLSP 113
+D+L+EM G P+ N + C +L+DA + M + G+ P
Sbjct: 448 QDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEP 507
Query: 114 NATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLW 173
+ TYN+ + LY M G +P+T + ++ +Q +++ A Q++
Sbjct: 508 DVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMF 567
Query: 174 NDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ M K F ++ + L C G + + + F EM ++G +++
Sbjct: 568 DSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITY 617
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 105/223 (47%), Gaps = 1/223 (0%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
KP++V++ L++ C++ +V +A ++++M ++ + P+ I+Y +I+ G+ +G A +
Sbjct: 179 KPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALN 238
Query: 67 VLKEMKEYG-CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+L++M+E P+ YN I R DA L EM EK + P+ TYN F
Sbjct: 239 LLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGF 298
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
S + L M+ P+ + L+ ++ K A +L+++M+ +
Sbjct: 299 CISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPST 358
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKA 228
+ + D C +L AE F KG P ++F + A
Sbjct: 359 VTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIA 401
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 87/172 (50%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV+PD+ +YN LI + + +A ++ E+M I PD I+Y+S+I GL + D+A
Sbjct: 504 GVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 563
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ M PD +N I YC A + D L EM ++G+ +A TY
Sbjct: 564 TQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYG 623
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDM 176
F +++ + +++ M+ +G P+T + ++ +E++E A+ + D+
Sbjct: 624 FRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELERAVAMLEDL 675
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 94/191 (49%), Gaps = 11/191 (5%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMR----DEDIS-------PDVISYT 49
M GV P++V+ N L+D C + +++ A ++ + M+ D D S PDV +Y
Sbjct: 454 MISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYN 513
Query: 50 SIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEK 109
+I GL G+ +A ++ +EM G PD Y++ I C RL +A+ + D M K
Sbjct: 514 ILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSK 573
Query: 110 GLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIA 169
SP+ T+N + + + L+C M G + + + + L+ ++ + ++ A
Sbjct: 574 SFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGA 633
Query: 170 LQLWNDMVEKG 180
L ++ +M+ G
Sbjct: 634 LDIFQEMISSG 644
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 94/213 (44%), Gaps = 5/213 (2%)
Query: 12 SYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEM 71
S+ L+ +C ++ A K+ P V+++ +++ GL + + +A D+ +M
Sbjct: 118 SFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQM 177
Query: 72 KEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDL 131
C P+ + + C R+ +A L+D M+E GL PN TY D
Sbjct: 178 ----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDT 233
Query: 132 RSSWNLYCRMMG-TGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDV 190
S+ NL +M + +PN ++ + + A L+ +M EK I+ +
Sbjct: 234 VSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNC 293
Query: 191 LFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + C G+ +AE+ EM+E+ P V+F
Sbjct: 294 MINGFCISGRWSDAEQLLQEMLERKINPDVVTF 326
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 59/117 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ PD ++Y+ +ID CK ++++A ++ + M + SPDV+++ ++I G G
Sbjct: 535 MPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGM 594
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
D ++ EM + G DA Y I + + A + EM+ G+ P+ T
Sbjct: 595 VDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTIT 651
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 3/106 (2%)
Query: 4 MGVK---PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MG K PD+V++N LI YCK V+ ++ +M I D I+Y ++I G V
Sbjct: 570 MGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDN 629
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEM 106
D A D+ +EM G YPD + + L A +++++
Sbjct: 630 IDGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELERAVAMLEDL 675
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 81/185 (43%), Gaps = 5/185 (2%)
Query: 43 PDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGL 102
P VI + ++G + +G+PD + K+M+ +A ++ ++ +C +L A
Sbjct: 79 PSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPCNAYSFTILMKCFCSCSKLPFALST 138
Query: 103 MDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKR 162
++ + G P T+N + + + +L+ +M C PN + L+ R
Sbjct: 139 FGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQM----CKPNVVTFTTLMNGLCR 194
Query: 163 QEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGH-KPSQV 221
+ +V A+ L + M+E G + + D +C MG V A +M E H P+ V
Sbjct: 195 EGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPNVV 254
Query: 222 SFRRI 226
+ I
Sbjct: 255 IYNTI 259
>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 694
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 119/245 (48%), Gaps = 8/245 (3%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+PD+V YN +ID CKD+ V +AY +M I PDVI+Y+++I G L GQ A
Sbjct: 268 TRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAF 327
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+L EM PD Y I C +L++A L+ M ++G+ PN TY+ +
Sbjct: 328 SLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGY 387
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSY 184
++ ++ ++ M+ T P+ S ++ LCK + V+ A+ L +M+ K
Sbjct: 388 CLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKS-VDEAMNLLREMLHKNVVPN 446
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSN 244
+ + L D LC G++ A E+ +G +++ +L++ K QNL
Sbjct: 447 TVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITY---TSLLDGLCKN---QNLDK 500
Query: 245 KMALF 249
+ALF
Sbjct: 501 AIALF 505
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 124/246 (50%), Gaps = 4/246 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ PD+++Y+ LI +C Q+ A+ ++ +M ++I+PDV +YT +I L G+
Sbjct: 298 MNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGK 357
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A+++L M + G P+ Y+ + YC+ + +A + MV+ ++P+ +YN+
Sbjct: 358 LKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNI 417
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + NL M+ +PNT + L+ + ++ AL L ++ +G
Sbjct: 418 MINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRG 477
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKAL---MELANKQ 236
+ ++ L D LC L +A F++M E+G +P++ ++ I L L N Q
Sbjct: 478 QPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQ 537
Query: 237 EALQNL 242
+ Q++
Sbjct: 538 KLFQHI 543
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 112/232 (48%), Gaps = 1/232 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GVKP++V+Y+ L+D YC +V A +I M +++P V SY +I GL
Sbjct: 368 MTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKS 427
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A ++L+EM P+ YN+ I C + R+ A LM E+ +G + TY
Sbjct: 428 VDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTS 487
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ +L + L+ +M G PN + L+ + +++ A +L+ ++ KG
Sbjct: 488 LLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKG 547
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALME 231
+ +V+ LC G L EA +M + G P V+F I++L E
Sbjct: 548 CCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFE 599
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 103/222 (46%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G + + VSY L++ CK + A K++ + D PDV+ Y +II GL ++A
Sbjct: 232 GFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEA 291
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
D EM G +PD Y+ I +C+A +L A L++EM K ++P+ TY +
Sbjct: 292 YDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDA 351
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
L+ + NL M G PN + L+ +V A Q+++ MV+
Sbjct: 352 LCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPS 411
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ +++ + LC + EA EM+ K P+ V++ +
Sbjct: 412 VCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSL 453
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 105/215 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + V P + SYN +I+ CK + V++A ++ +M +++ P+ ++Y S+I GL G+
Sbjct: 403 MVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGR 462
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A D++KE+ G D Y + + C + L A L +M E+G+ PN TY
Sbjct: 463 ITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTA 522
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
L+++ L+ ++ GC + + ++ ++ ++ AL + + M + G
Sbjct: 523 LIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNG 582
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
+ +++ L + + +AEK EMI KG
Sbjct: 583 CIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAKG 617
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 102/221 (46%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
++G +P+ + L+ C +V+K+ +K+ + + +SY +++ GL +G+
Sbjct: 195 KLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETR 254
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
A +L+ +++ PD YN I C K + +A EM +G+ P+ TY+
Sbjct: 255 CAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLI 314
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
F + L +++L M P+ + L+ ++ K++ A L M ++G
Sbjct: 315 CGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVK 374
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ L D C +G++ A++ F M++ PS S+
Sbjct: 375 PNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSY 415
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 99/226 (43%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G++PD+V+ + LI+ +C Q+ ++ ++ K+ P+ I T+++ GL L G+
Sbjct: 158 MEVKGIEPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGE 217
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
K+ ++ G + +Y + C R A L+ + ++ P+ YN
Sbjct: 218 VKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNT 277
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ +++ Y M G P+ + L+ ++ A L N+M K
Sbjct: 278 IIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKN 337
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ +L D LC GKL EA+ M ++G KP+ V++ +
Sbjct: 338 INPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTL 383
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 71/147 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+ G D+++Y L+D CK++ ++KA + KM++ I P+ +YT++I GL +
Sbjct: 473 LHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGAR 532
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A+ + + + GC D YN I C L +A + +M + G P+A T+ +
Sbjct: 533 LKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEI 592
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCL 147
R + ++ + L M+ G L
Sbjct: 593 IIRSLFEKDENDKAEKLLHEMIAKGLL 619
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/208 (20%), Positives = 91/208 (43%), Gaps = 2/208 (0%)
Query: 42 SPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASG 101
+P +I + I+G L + A + K+M+ G PD + I +C ++ +
Sbjct: 129 TPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSFS 188
Query: 102 LMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LC 160
++ ++++ G PN + +++ S + + +++ G N S L+ LC
Sbjct: 189 VLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLC 248
Query: 161 KRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQ 220
K E A++L + ++ +++ + + D LC + EA + EM +G P
Sbjct: 249 KIGE-TRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDV 307
Query: 221 VSFRRIKALMELANKQEALQNLSNKMAL 248
+++ + LA + +L N+M L
Sbjct: 308 ITYSTLICGFCLAGQLMGAFSLLNEMTL 335
>gi|226493231|ref|NP_001140656.1| hypothetical protein [Zea mays]
gi|194700420|gb|ACF84294.1| unknown [Zea mays]
gi|414587025|tpg|DAA37596.1| TPA: hypothetical protein ZEAMMB73_567962 [Zea mays]
Length = 598
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 105/222 (47%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PD+V+YN L+ CK R +A ++++ MR E P+ ++Y II + G D+A
Sbjct: 193 GCAPDVVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQA 252
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
R++L + GC P+ YN ++ +C +R DA ++DEMV + PN T N+
Sbjct: 253 RELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVIINT 312
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
L+ +M GC N + ++ Q V+ AL+L ++M G
Sbjct: 313 LCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPD 372
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
I+ + + LC + +AE+ ++M + P +F I
Sbjct: 373 IVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTI 414
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 108/219 (49%), Gaps = 1/219 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P+ + N +I+ C+ ++K +EKM + +V++Y ++I G+ G D A ++
Sbjct: 301 PNEATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALEL 360
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L M+ +GC PD YN ++ C A R DA LM +M + P+ +T+N +
Sbjct: 361 LSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQ 420
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ ++ ++ +M GC PN+ + ++ + K+E AL+L N+M KGF + +
Sbjct: 421 KGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKGFNTDKMY 480
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
VL + L K+ E + ++ + G P V + +
Sbjct: 481 R-VLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTV 518
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 114/250 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G +P+ V+YN +ID C++ V++A +++ + P+ ++Y +++ G + +
Sbjct: 224 MRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIER 283
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A ++L EM C P+ A N I C L+ + +++M + G + N TYN
Sbjct: 284 WVDADEILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNA 343
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++ S+ L M GC P+ + ++K ++ E A +L M +
Sbjct: 344 VISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQND 403
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ + C G +++A + F +M EKG P+ ++ I + A K E
Sbjct: 404 RLPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQAL 463
Query: 241 NLSNKMALFG 250
L N+MA G
Sbjct: 464 ELLNEMANKG 473
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 109/248 (43%), Gaps = 4/248 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G + +Y L+D YC+ +E A ++V M + ++ +I L G+ A
Sbjct: 123 GPEATAATYGALVDGYCRAGLLEDARRVVGGMPAHVQASSAYAHNPLIHALCERGRVADA 182
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
VL M GC PD YN ++ C + R A L+D M +G PN TYN+
Sbjct: 183 LVVLDGMLCRGCAPDVVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDA 242
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGS 183
D+ + L + GC PNT + ++K C + V+ A ++ ++MV +
Sbjct: 243 MCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVD-ADEILDEMVRENCPP 301
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNL 242
+V+ + LC G L + +M + G + V++ I + E N AL+ L
Sbjct: 302 NEATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELL 361
Query: 243 SNKMALFG 250
SN M FG
Sbjct: 362 SN-MQSFG 368
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 96/199 (48%), Gaps = 11/199 (5%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G KPDIV+YN ++ C + E A +++ KM D PD ++ +II G
Sbjct: 364 MQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGL 423
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A +V K+M E GC P++ Y+ I A ++ A L++EM KG + + Y +
Sbjct: 424 ILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKGFNTD-KMYRV 482
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMF---LVKLCKRQEKVEIALQLWNDMV 177
+ + + ++ +G P Q+ ++ L+ LC R K + A+ + DMV
Sbjct: 483 LTESLNKEDKIEEVVQVVHKLQDSGISP--QTVLYNTVLLGLC-RNGKTDYAIDVLADMV 539
Query: 178 EKGF----GSYILVSDVLF 192
G +YI++ + LF
Sbjct: 540 SCGCMPDESTYIILIEGLF 558
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 58/122 (47%), Gaps = 3/122 (2%)
Query: 13 YNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMK 72
Y L + K+ ++E+ ++V K++D ISP + Y +++ GL G+ D A DVL +M
Sbjct: 480 YRVLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYAIDVLADMV 539
Query: 73 EYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLR 132
GC PD + Y I ++A L+ + + + N+ N ++R
Sbjct: 540 SCGCMPDESTYIILIEGLFYEGYSKEARELLSRLCSRDVLSNSLIKN---EALLLDQNIR 596
Query: 133 SS 134
SS
Sbjct: 597 SS 598
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/177 (19%), Positives = 75/177 (42%), Gaps = 34/177 (19%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD ++N +I +C+ + +A+++ ++M ++ +P+ +Y++IIGGL G+ ++A ++
Sbjct: 406 PDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALEL 465
Query: 68 LKEM----------------------------------KEYGCYPDAAAYNAAIRNYCIA 93
L EM ++ G P YN + C
Sbjct: 466 LNEMANKGFNTDKMYRVLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRN 525
Query: 94 KRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNT 150
+ A ++ +MV G P+ +TY + ++ + + L R+ L N+
Sbjct: 526 GKTDYAIDVLADMVSCGCMPDESTYIILIEGLFYEGYSKEARELLSRLCSRDVLSNS 582
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 85/221 (38%), Gaps = 42/221 (19%)
Query: 43 PDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAA--YNAAIRNYCIA------- 93
PDV ++ L G+P A V++ C P+A A Y A + YC A
Sbjct: 94 PDVPLANRLVRDLCRRGRPADAARVVE-----ACGPEATAATYGALVDGYCRAGLLEDAR 148
Query: 94 ----------------------------KRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
R+ DA ++D M+ +G +P+ TYN+ +
Sbjct: 149 RVVGGMPAHVQASSAYAHNPLIHALCERGRVADALVVLDGMLCRGCAPDVVTYNILLQAA 208
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
R + L M GC PN + ++ R+ V+ A +L N + +G
Sbjct: 209 CKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNT 268
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + + C + + V+A++ EM+ + P++ + I
Sbjct: 269 VNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVI 309
>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
Length = 1116
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 121/250 (48%), Gaps = 4/250 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E+ + PD V++N LI CK E+A + E+M +++ PDV+++ ++I GL GQ
Sbjct: 558 MLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQ 617
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ ARD+L M G P+ YNA + C + R+ +A ++EMV G P++ TY
Sbjct: 618 VEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGS 677
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++ + L + G P+T + LV + + E A+ + +MV KG
Sbjct: 678 LVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKG 737
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHK---PSQVSFR-RIKALMELANKQ 236
++ + L D LC G L EA + +M + + P+ V++ I L ++
Sbjct: 738 HHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRID 797
Query: 237 EALQNLSNKM 246
EA + + M
Sbjct: 798 EARELIQEMM 807
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 125/250 (50%), Gaps = 19/250 (7%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDED--ISPDVISYTSIIGGLGLVGQPDK 63
V P+I++YN +D CK +A +++ +RD +SPD ++++++I GL GQ D+
Sbjct: 319 VLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDE 378
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
A V +M G P+ YNA + C A ++ A +++ MV+KG++P+ TY++
Sbjct: 379 ACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVD 438
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFG 182
F ++ + + L M GC PN + ++ LCK E A Q+++DM K
Sbjct: 439 AFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGE-AFQMFDDMALK--- 494
Query: 183 SYILVSD-----VLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQ 236
+ LV D L D L G+ +AE +++ P +F I L +L +
Sbjct: 495 -HGLVPDKITYCTLIDGLFRTGRAGQAEA----LLDAMPDPDTYAFNCCINGLSKLGDVS 549
Query: 237 EALQNLSNKM 246
ALQ + N+M
Sbjct: 550 RALQ-VYNRM 558
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 119/242 (49%), Gaps = 10/242 (4%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDED--ISPDVISYTSIIGGLGLVGQPDK 63
V P+I++YN +D CK + +A +++ +RD +SPD ++++++I GL GQ D+
Sbjct: 813 VLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDE 872
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
A +V +M G P+ YN + C ++ A +++ MV+KG++P+ TY++
Sbjct: 873 ACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVD 932
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK-GF 181
F ++ + + L M GC PN + ++ LCK + E A Q+++DM K G
Sbjct: 933 AFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGE-AFQMFDDMTLKHGL 991
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEALQ 240
+ L D L G +AE +++ P +F I L +L + AL
Sbjct: 992 APDKITYCTLIDGLFRTGWAGQAEV----LLDAMPDPDTYAFNCCINGLSKLGDVSRALH 1047
Query: 241 NL 242
+
Sbjct: 1048 RM 1049
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 111/232 (47%), Gaps = 1/232 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD ++NC I+ K V +A ++ +M + ++ PD +++ +I G G ++A +
Sbjct: 530 PDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASAL 589
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
+EM PD + A I C A ++ A ++D M G+ PN TYN
Sbjct: 590 FEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCK 649
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
S + + M+ +GC+P++ + LV R + + ALQL +++ G+ +
Sbjct: 650 SGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVT 709
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEA 238
++L D L G+ +A EM+ KGH P V++ I +L + + +EA
Sbjct: 710 YNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEA 761
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 119/247 (48%), Gaps = 5/247 (2%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G P++++YN L++ CK ++E+A+ ++E M D+ ++PDVI+Y+ ++ + D+A
Sbjct: 390 GYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEA 449
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEK-GLSPNATTYNLFFR 123
++L M GC P+ +N+ I C + R +A + D+M K GL P+ TY
Sbjct: 450 LELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLID 509
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
+ + + L M P+T + + + V ALQ++N M+E
Sbjct: 510 GLFRTGRAGQAEALLDAMPD----PDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVP 565
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLS 243
+ ++L C G +A F EM+ K +P ++F + + A + EA +++
Sbjct: 566 DKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDIL 625
Query: 244 NKMALFG 250
+ M G
Sbjct: 626 DLMGNLG 632
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 117/245 (47%), Gaps = 10/245 (4%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDIS----PDVISYTSIIGGLGLVGQ 60
G PD+V+YN LID CK +E+A ++ M +S P+V++Y+ +I GL VG+
Sbjct: 737 GHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSR-VSRCCVPNVVTYSVLINGLCKVGR 795
Query: 61 PDKARDVLKEMKEYGC--YPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGL--SPNAT 116
D+AR++++EM C P+ YN+ + C + +A LM + + L SP+
Sbjct: 796 IDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTV 855
Query: 117 TYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDM 176
T++ + N++ M+ G +PN + L+ + +K+E A + M
Sbjct: 856 TFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESM 915
Query: 177 VEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANK 235
V+KG ++ VL D C + EA + M +G P+ V+F I L +
Sbjct: 916 VDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQS 975
Query: 236 QEALQ 240
EA Q
Sbjct: 976 GEAFQ 980
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 117/248 (47%), Gaps = 7/248 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV P IV+YN +I+ CK ++ ++ E++ + PDV++Y ++I L G
Sbjct: 207 MARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGD 266
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKG--LSPNATTY 118
++AR + +M C P+ Y+ I C R+ +A L+ EM K + PN TY
Sbjct: 267 LEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITY 326
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCL---PNTQSCMFLVKLCKRQEKVEIALQLWND 175
N F + + L R + G L P+T + L+ + +++ A +++D
Sbjct: 327 NSFLDGLCKQSMTAEACELM-RSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDD 385
Query: 176 MVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELAN 234
M+ G+ ++ + L + LC K+ A M++KG P +++ + A + +
Sbjct: 386 MIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASR 445
Query: 235 KQEALQNL 242
EAL+ L
Sbjct: 446 VDEALELL 453
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 115/245 (46%), Gaps = 8/245 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV PD+++Y+ L+D +CK +V++A +++ M +P+V+++ SII GL +
Sbjct: 421 MVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDR 480
Query: 61 PDKARDVLKEMK-EYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+A + +M ++G PD Y I R A L+D M + P+ +N
Sbjct: 481 SGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPD----PDTYAFN 536
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
D+ + +Y RM+ +P+ + L+ + E A L+ +MV K
Sbjct: 537 CCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAK 596
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEK-GHKPSQVSFRR-IKALMELANKQE 237
++ L D LC G+ VEA + L+++ G P+ V++ + L + +E
Sbjct: 597 NLQPDVMTFGALIDGLCKAGQ-VEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEE 655
Query: 238 ALQNL 242
A Q L
Sbjct: 656 ACQFL 660
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 107/226 (47%), Gaps = 20/226 (8%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G P++V+YN L++ CK ++E+A+ ++E M D+ ++PDVI+Y+ ++ D+A
Sbjct: 884 GYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEA 943
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEK-GLSPNATTYNLFFR 123
++L M GC P+ +N+ I C + + +A + D+M K GL+P+ TY
Sbjct: 944 LELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLID 1003
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMF------LVKLCKRQEKVEIALQLWNDMV 177
+ R+ W ++ +P+ + F L KL + L+L ++V
Sbjct: 1004 GLF-----RTGWAGQAEVL-LDAMPDPDTYAFNCCINGLSKLGDVSRALHRMLEL--ELV 1055
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
IL++ C G +A F EM+ K +P ++F
Sbjct: 1056 PDKVTFNILIAGA-----CKAGNFEQASALFEEMVAKNLQPDVMTF 1096
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 116/252 (46%), Gaps = 7/252 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMR-DEDISPDVISYTSIIGGLGLVG 59
M G P++V++N +ID CK + +A+++ + M + PD I+Y ++I GL G
Sbjct: 456 MASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTG 515
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ +A +L M + PD A+N I + A + + M+E L P+ T+N
Sbjct: 516 RAGQAEALLDAMPD----PDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFN 571
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ + + + L+ M+ P+ + L+ + +VE A + + M
Sbjct: 572 ILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNL 631
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEA 238
G ++ + L LC G++ EA + EM+ G P +++ + AL + +A
Sbjct: 632 GVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDA 691
Query: 239 LQNLSNKMALFG 250
LQ L +++ FG
Sbjct: 692 LQ-LVSELKSFG 702
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 110/246 (44%), Gaps = 13/246 (5%)
Query: 10 IVSYNCLIDVYCKDRQVEKAYKIVE-KMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
+ YN ++ C+ + +A +I +M + ++P +++Y +II GL + ++
Sbjct: 180 VADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELF 239
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
+E+ E G +PD YN I + C A L +A L +M + PN TY++
Sbjct: 240 EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKV 299
Query: 129 NDLRSSWNLYCRMMGTGC--LPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ + L M C LPN + FL LCK+ E A +L + + GS
Sbjct: 300 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAE-ACELMRSLRD---GSLR 355
Query: 186 LVSD-----VLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ D L D LC G++ EA F +MI G+ P+ +++ + + A+K E
Sbjct: 356 VSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAH 415
Query: 241 NLSNKM 246
+ M
Sbjct: 416 AMIESM 421
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 9/205 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV PD+++Y+ L+D +CK V++A +++ M +P+V+++ SII GL Q
Sbjct: 915 MVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQ 974
Query: 61 PDKARDVLKEMK-EYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+A + +M ++G PD Y I A L+D M + P+ +N
Sbjct: 975 SGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMPD----PDTYAFN 1030
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
D+ + + RM+ +P+ + L+ + E A L+ +MV K
Sbjct: 1031 CCINGLSKLGDVSRALH---RMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAK 1087
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEA 204
++ L D LC G+ VEA
Sbjct: 1088 NLQPDVMTFGALIDGLCKAGQ-VEA 1111
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 72/166 (43%), Gaps = 29/166 (17%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMR-DEDISPDVISYTSIIGGL---G 56
M G P++V++N +ID CK Q +A+++ + M ++PD I+Y ++I GL G
Sbjct: 950 MASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTG 1009
Query: 57 LVGQ----------PD------------KARDV---LKEMKEYGCYPDAAAYNAAIRNYC 91
GQ PD K DV L M E PD +N I C
Sbjct: 1010 WAGQAEVLLDAMPDPDTYAFNCCINGLSKLGDVSRALHRMLELELVPDKVTFNILIAGAC 1069
Query: 92 IAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNL 137
A AS L +EMV K L P+ T+ + + ++W++
Sbjct: 1070 KAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEATWDI 1115
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 41/68 (60%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E+ + PD V++N LI CK E+A + E+M +++ PDV+++ ++I GL GQ
Sbjct: 1049 MLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQ 1108
Query: 61 PDKARDVL 68
+ D++
Sbjct: 1109 VEATWDIM 1116
Score = 44.7 bits (104), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 73/192 (38%), Gaps = 37/192 (19%)
Query: 59 GQPDKARDVLKEMKEYGCYPD----------------------------------AAAYN 84
G P KA D+ + C P+ A YN
Sbjct: 125 GSPAKAIDLFRSRLPPRCRPNHFTYSTLLRATYKAGGDVERTLGFFRRIRSSSRSVADYN 184
Query: 85 AAIRNYCIAKRLRDASGLM-DEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMG 143
+++ C A A + EM G++P TYN SN+L + L+ ++
Sbjct: 185 IVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVE 244
Query: 144 TGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLV 202
G P+ + L+ LCK + +E A +L DM + ++ VL + LC +G++
Sbjct: 245 RGHHPDVVTYNTLIDSLCKAGD-LEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRID 303
Query: 203 EAEKSFLEMIEK 214
EA + EM K
Sbjct: 304 EARELIQEMTRK 315
>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 586
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 121/244 (49%), Gaps = 2/244 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV+P++V+YN L+D +C ++++A K+ + M +P+VISY ++I G + + DKA
Sbjct: 309 GVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKA 368
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ +EM + P+ YN + + C RL+DA L EMV G P+ TY +
Sbjct: 369 TYLFEEMCQKELIPNTVTYNT-LMHXCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDY 427
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ L + L + G+ P+ Q ++ R ++E A +++++ KG
Sbjct: 428 LCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPN 487
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI-KALMELANKQEALQNLS 243
+ ++ + LC G L EA K F+EM G P ++ I + L++ A+Q L
Sbjct: 488 VRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQ 547
Query: 244 NKMA 247
+A
Sbjct: 548 EMLA 551
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 110/224 (49%), Gaps = 1/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + +PD+V Y +ID CKDRQV +A+ + KM + ISPD+ +YTS+I L + +
Sbjct: 200 MEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCE 259
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+L +M PD ++ + C ++ +A ++D M+ +G+ PN TYN
Sbjct: 260 WKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNA 319
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+++ + ++ M+ G PN S L+ + ++++ A L+ +M +K
Sbjct: 320 LMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKE 379
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
+ + L C +G+L +A F EM+ G P ++R
Sbjct: 380 LIPNTVTYNTLMH-XCHVGRLQDAIALFHEMVAHGQIPDLATYR 422
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 111/224 (49%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
++G +PD ++ LI C + ++ A + +KM E P+V++Y ++I GL VG +
Sbjct: 132 KLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTN 191
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
A +L+ M++ C PD Y + I + C +++ +A L +MV +G+SP+ TY
Sbjct: 192 AAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLI 251
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
+ + L +M+ + +P+ +V ++ K+ A + + M+ +G
Sbjct: 252 HSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVE 311
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ + L D C ++ EA K F M+ G+ P+ +S+ +
Sbjct: 312 PNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTL 355
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 118/256 (46%), Gaps = 3/256 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G +P++V+Y LI+ CK A +++ M + PDV+ YTSII L Q +A
Sbjct: 169 GFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEA 228
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++ +M G PD Y + I + C + + L+++M+ + P+ ++
Sbjct: 229 FNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDA 288
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + ++ M+ G PN + L+ Q +++ A+++++ MV G+
Sbjct: 289 LCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPN 348
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSN 244
++ + L + C + ++ +A F EM +K P+ V++ + + Q+A+ L +
Sbjct: 349 VISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHXCHVGRLQDAIA-LFH 407
Query: 245 KMALFGPSMIPKREEY 260
+M G IP Y
Sbjct: 408 EMVAHG--QIPDLATY 421
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 107/267 (40%), Gaps = 40/267 (14%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M M P V +N L+ K +Q + + +M I PDV + +I + +
Sbjct: 60 MLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNR 119
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A VL ++ + G PD A + IR C+ ++ DA L D+M+ +G PN TY
Sbjct: 120 LGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGT 179
Query: 121 FFR---------------------------VFYWS--------NDLRSSWNLYCRMMGTG 145
V Y S + ++NL+ +M+G G
Sbjct: 180 LINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQG 239
Query: 146 CLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEA 204
P+ + L+ LC E + L N M+ +++ + D LC GK+ EA
Sbjct: 240 ISPDIFTYTSLIHSLCNLCEWKHVT-TLLNQMINSKIMPDVVIFSTVVDALCKEGKITEA 298
Query: 205 EKSFLEMIEKGHKPSQVSFRRIKALME 231
MI +G +P+ V++ ALM+
Sbjct: 299 HDVVDMMIIRGVEPNVVTY---NALMD 322
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 106/245 (43%), Gaps = 37/245 (15%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P+++SYN LI+ YCK ++++KA + E+M +++ P+ ++Y +++ VG+
Sbjct: 340 MVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHXCH-VGR 398
Query: 61 PDKARDVLKEMKEYGCYPDAAAY-----------------------------------NA 85
A + EM +G PD A Y
Sbjct: 399 LQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTI 458
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
I C A L A + + KGL PN TY + L + L+ M G G
Sbjct: 459 VIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNG 518
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
C P+ + + + + ++ A+QL +M+ +GF + + + +L ++LCD KL ++
Sbjct: 519 CSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCD-DKLDQSV 577
Query: 206 KSFLE 210
K L
Sbjct: 578 KQILS 582
>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
Length = 573
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 110/244 (45%), Gaps = 5/244 (2%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
KPD+V+Y LID +CK +EKA K++ M P+V++Y+S++ GL G D+A D
Sbjct: 181 KPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALD 240
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
+ + M GC P+ Y I C A ++ A LMDEM P+ +YN +
Sbjct: 241 LFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYC 300
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ + L+ M CLP+ + LV+ C E L N G +
Sbjct: 301 RLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDV 360
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELA---NKQEALQN 241
+ ++ + VEA + EMI + P+ V++ I L + + E L+N
Sbjct: 361 VTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKN 420
Query: 242 LSNK 245
+ NK
Sbjct: 421 MVNK 424
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 125/255 (49%), Gaps = 37/255 (14%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDED-ISPDVISYTSIIGGLGLVGQPDKA 64
V PD+V+Y+ +I+ +CK ++++A +I+ +M D I+PDV++YTS++ GL G+ D+A
Sbjct: 73 VAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDRA 132
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEM------------------ 106
++++EMK G PD ++A I +C A+++ +A L E+
Sbjct: 133 CEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALID 192
Query: 107 -------VEKGLS-----------PNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLP 148
+EK + PN TY+ + DL + +L+ RM GC+P
Sbjct: 193 GFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVP 252
Query: 149 NTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSF 208
N + L+ KV+ A L ++M + + L D C +G++ EA++ F
Sbjct: 253 NVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLF 312
Query: 209 LEMIEKGHKPSQVSF 223
EM K P ++++
Sbjct: 313 KEMATKSCLPDRITY 327
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 108/225 (48%), Gaps = 3/225 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P++V+Y LI C +V+ A ++++M PD +SY +++ G +G+
Sbjct: 245 MTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGR 304
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEM-VEKGLSPNATTYN 119
++A+ + KEM C PD Y +R +C A RL +A L++ M G+ P+ TY+
Sbjct: 305 IEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYS 364
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVE 178
+ + + + M+ PN + L+ LCK +V+ A+++ +MV
Sbjct: 365 IVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCK-AGRVDHAMEVLKNMVN 423
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
K + + + LC +G + EA K + M G +P V++
Sbjct: 424 KRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTY 468
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 126/250 (50%), Gaps = 4/250 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRD-EDISPDVISYTSIIGGLGLVG 59
MRE V P+ +YN +++ CK R KAY+++++MRD + ++PD+++Y+++I G G
Sbjct: 33 MREF-VAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQG 91
Query: 60 QPDKARDVLKEM-KEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
+ D+A ++L+EM G PD Y + + C ++ A ++ EM KG+ P+ T+
Sbjct: 92 EMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTF 151
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCL-PNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
+ + + + + LY ++ + P+ + L+ + +E A+++ M
Sbjct: 152 SALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVME 211
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQE 237
+ ++ L LC G L +A F M KG P+ V++ + + A+K +
Sbjct: 212 GRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVD 271
Query: 238 ALQNLSNKMA 247
A + L ++M
Sbjct: 272 AARLLMDEMT 281
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 62/119 (52%), Gaps = 9/119 (7%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDE--------DISPDVISYTSII 52
M G++P +V+Y L++ + + ++E AY++ E MR + ++ P+ +++++I
Sbjct: 456 MAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQ-AFSALI 514
Query: 53 GGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGL 111
GL + DKA V++E++ C P A + A R +A L++ + + GL
Sbjct: 515 RGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVGL 573
>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 517
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 106/212 (50%), Gaps = 2/212 (0%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ PD+ ++ L+D +CK+ +V++A ++ M + I P V++Y S++ G LV Q +KA+
Sbjct: 173 INPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAK 232
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+ M + G PD +Y+ I +C K + +A L+ EM K + PN TY+
Sbjct: 233 SIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGL 292
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
S + + L M G PN + L LCK + V+ A+ L M +G
Sbjct: 293 CKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQ-VDNAIALLTQMKNQGIQPN 351
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGH 216
+ +L LC GKL +A K F +++ KGH
Sbjct: 352 MYTYTILIKGLCQSGKLEDARKVFEDLLVKGH 383
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 116/237 (48%), Gaps = 2/237 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+KP +V+YN L+D Y +QV KA I M +SPD+ SY+ +I G +
Sbjct: 203 MMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKM 262
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A ++LKEM P+ Y++ I C + ++ A L+DEM ++G PN TY+
Sbjct: 263 MDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSS 322
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++ + ++ L +M G PN + L+K + K+E A +++ D++ KG
Sbjct: 323 ILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKG 382
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQE 237
+ V+ CD G EA +M + G P+ ++ I ++ L K E
Sbjct: 383 HNLNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEII--ILSLFKKDE 437
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 102/192 (53%), Gaps = 1/192 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + P++V+Y+ LID CK ++ A K+V++M D P++++Y+SI+ L Q
Sbjct: 273 MHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQ 332
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A +L +MK G P+ Y I+ C + +L DA + ++++ KG + N TY +
Sbjct: 333 VDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTV 392
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ F + L +M GC+PN ++ ++ ++++ E+A +L +M+E
Sbjct: 393 MIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEMIETN 452
Query: 181 F-GSYILVSDVL 191
F G L +D++
Sbjct: 453 FDGRVALTNDLI 464
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 111/236 (47%), Gaps = 10/236 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGL--- 57
M G+KP++V+ N LI+ +C+ + A+ ++ K+ P+ I+ ++I GL L
Sbjct: 88 MEFRGIKPNLVNCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGK 147
Query: 58 -------VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKG 110
VG+ A D+ +M PD + + +C R+++A ++ M+ +G
Sbjct: 148 IHDKHCIVGKLKDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQG 207
Query: 111 LSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIAL 170
+ P TYN ++ + + +++ M G P+ QS L+ + + ++ A+
Sbjct: 208 IKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAM 267
Query: 171 QLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+L +M K ++ L D LC GK+ A K EM ++G P+ V++ I
Sbjct: 268 ELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSI 323
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 88/209 (42%), Gaps = 12/209 (5%)
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
D A + + + P +N + + +K L +M +G+ PN N+
Sbjct: 44 DDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNIL 103
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQE---------KVEIALQ 171
F + S++++ +++ G PNT + L+K LC + K++ A+
Sbjct: 104 INSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVD 163
Query: 172 LWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALME 231
L+N M+ + + +L D C G++ EA+ M+ +G KP V++ +
Sbjct: 164 LFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYF 223
Query: 232 LANKQEALQNLSNKMALFGPSMIPKREEY 260
L + +++ N MA G S P + Y
Sbjct: 224 LVKQVNKAKSIFNTMAQLGVS--PDIQSY 250
>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 634
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 119/244 (48%), Gaps = 25/244 (10%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G P++V+Y LI Y K R++ +A +I E M P++++YT++I G G+
Sbjct: 183 MQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGE 242
Query: 61 PDKA---------------------RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDA 99
+KA R V E+KE P+ Y A + C A ++++A
Sbjct: 243 TEKACQIYARMKNDKVDIPDVDIYFRIVDSELKE----PNVVTYGALVDGLCKAHKVKEA 298
Query: 100 SGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKL 159
L++ M +G PN Y+ F L + ++ +M+G GC PN + L+
Sbjct: 299 RDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDK 358
Query: 160 CKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
+ +++++AL++ M+E +++ + D LC +GK EA + L M EKG P+
Sbjct: 359 LFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPN 418
Query: 220 QVSF 223
V++
Sbjct: 419 VVTY 422
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 114/246 (46%), Gaps = 20/246 (8%)
Query: 1 MREM---GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGL 57
+REM G PD +Y+ +I C +VEKA+++ ++M+ I+PDV +YT+++
Sbjct: 110 IREMMSKGFIPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCK 169
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
VG ++AR+ EM++ GC P+ Y A I Y ++L A+ + + M+ G PN T
Sbjct: 170 VGLIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVT 229
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGC-----------------LPNTQSCMFLVKLC 160
Y + + + +Y RM PN + LV
Sbjct: 230 YTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGL 289
Query: 161 KRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQ 220
+ KV+ A L M +G ++ D L D C +GKL EA++ F +M+ G P+
Sbjct: 290 CKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNV 349
Query: 221 VSFRRI 226
++ +
Sbjct: 350 YTYSSL 355
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 110/241 (45%), Gaps = 17/241 (7%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDI-----------------SP 43
M G P+IV+Y LID +CK + EKA +I +M+++ + P
Sbjct: 218 MLSNGCVPNIVTYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEP 277
Query: 44 DVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLM 103
+V++Y +++ GL + +ARD+L+ M GC P+ Y+A I +C +L +A +
Sbjct: 278 NVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVF 337
Query: 104 DEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQ 163
+M+ G SPN TY+ + L + + +M+ C PN +V +
Sbjct: 338 TKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKV 397
Query: 164 EKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
K + A +L M EKG ++ + D G++ + M KG P+ +++
Sbjct: 398 GKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITY 457
Query: 224 R 224
R
Sbjct: 458 R 458
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 112/269 (41%), Gaps = 17/269 (6%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M EMGV + V+ C + EKAY ++ +M + PD +Y+ +IG L +
Sbjct: 78 MLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPDSSTYSKVIGYLCNASK 137
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA + +EMK G PD Y + +C + A DEM + G +PN TY
Sbjct: 138 VEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQDGCAPNVVTYTA 197
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLW----NDM 176
+ + L + ++ M+ GC+PN + L+ + + E A Q++ ND
Sbjct: 198 LIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQIYARMKNDK 257
Query: 177 VE-KGFGSYILVSD------------VLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
V+ Y + D L D LC K+ EA M +G +P+Q+ +
Sbjct: 258 VDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIY 317
Query: 224 RRIKALMELANKQEALQNLSNKMALFGPS 252
+ K + Q + KM G S
Sbjct: 318 DALIDGFCKVGKLDEAQEVFTKMLGHGCS 346
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 122/274 (44%), Gaps = 35/274 (12%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P++ +Y+ LID KD++++ A K++ KM + +P+V+ YT ++ GL VG+
Sbjct: 340 MLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGK 399
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A ++ M+E GCYP+ Y A I + A R+ L+ M KG +PN TY +
Sbjct: 400 TDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRV 459
Query: 121 FF-------------------RVFYW--------------SNDLRSSWNLYCRMMGTGCL 147
+ YW S++ +S L + G +
Sbjct: 460 LINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIEGFSHEFVASLGLLAELSEDGSV 519
Query: 148 PNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKS 207
P L+ + ++E+AL+L ++ +Y L + L K+ +A K
Sbjct: 520 PILPVYKLLIDNFIKAGRLEMALELHEELSSFS-AAYQNTYVSLIESLTLACKVDKAFKL 578
Query: 208 FLEMIEKGHKPS-QVSFRRIKALMELANKQEALQ 240
+ +M +G P + IK L+ + +EALQ
Sbjct: 579 YSDMTRRGFVPELSMLVCLIKGLLRVGKWEEALQ 612
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 84/181 (46%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G +P+ + Y+ LID +CK ++++A ++ KM SP+V +Y+S+I L + D A
Sbjct: 309 GCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLA 368
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
VL +M E C P+ Y + C + +A LM M EKG PN TY
Sbjct: 369 LKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDG 428
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
F + + L M GC PN + L+ C ++ A +L +M + + +
Sbjct: 429 FGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKH 488
Query: 185 I 185
I
Sbjct: 489 I 489
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 98/248 (39%), Gaps = 41/248 (16%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGG---------- 54
G P + +N L+ YC+ AYK+++KM P + Y +IGG
Sbjct: 6 GCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTEDLPSM 65
Query: 55 --LGL-----------------------------VGQPDKARDVLKEMKEYGCYPDAAAY 83
+GL +G+ +KA +V++EM G PD++ Y
Sbjct: 66 EVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPDSSTY 125
Query: 84 NAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMG 143
+ I C A ++ A L EM G++P+ TY F + + N + M
Sbjct: 126 SKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQ 185
Query: 144 TGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVE 203
GC PN + L+ + K+ A +++ M+ G I+ L D C G+ +
Sbjct: 186 DGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEK 245
Query: 204 AEKSFLEM 211
A + + M
Sbjct: 246 ACQIYARM 253
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 91/245 (37%), Gaps = 67/245 (27%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E P++V Y ++D CK + ++AY+++ M ++ P+V++YT++I G G G+
Sbjct: 375 MLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGR 434
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDAS-------------------- 100
D+ ++L+ M GC P+ Y I + C A L DA
Sbjct: 435 VDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRK 494
Query: 101 -------------GLMDEMVEKGLSPNATTYNLFFRVFYWSNDLR--------------- 132
GL+ E+ E G P Y L F + L
Sbjct: 495 VIEGFSHEFVASLGLLAELSEDGSVPILPVYKLLIDNFIKAGRLEMALELHEELSSFSAA 554
Query: 133 -------------------SSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLW 173
++ LY M G +P + L+K R K E ALQL
Sbjct: 555 YQNTYVSLIESLTLACKVDKAFKLYSDMTRRGFVPELSMLVCLIKGLLRVGKWEEALQLS 614
Query: 174 NDMVE 178
+ + +
Sbjct: 615 DSICQ 619
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 78/197 (39%), Gaps = 6/197 (3%)
Query: 36 MRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKR 95
M E P + + S++ G A +LK+M G P YN I C +
Sbjct: 2 MITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTED 61
Query: 96 LRD------ASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPN 149
L A +EM+E G+ N F R ++N+ MM G +P+
Sbjct: 62 LPSMEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPD 121
Query: 150 TQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFL 209
+ + ++ KVE A QL+ +M G + L D C +G + +A F
Sbjct: 122 SSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFD 181
Query: 210 EMIEKGHKPSQVSFRRI 226
EM + G P+ V++ +
Sbjct: 182 EMQQDGCAPNVVTYTAL 198
>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
Length = 653
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 102/200 (51%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
D V++N L+D +C++ V + +++E+M + PDVI+YT++I G G D+A +L
Sbjct: 364 DDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLL 423
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
K M GC P+ +Y ++ C A+R DA LM +M+E+G SPN T+N
Sbjct: 424 KSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKK 483
Query: 129 NDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVS 188
+ + L +M+ GC P+ S ++ + K + AL+L N MV KG ++
Sbjct: 484 GLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIY 543
Query: 189 DVLFDLLCDMGKLVEAEKSF 208
+ L G++ + F
Sbjct: 544 SSIASALSKEGRINRVIQMF 563
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 110/226 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G P++V++N LI C++ E+ ++++ +M D +PD+ Y +++ G+ G
Sbjct: 251 MVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGH 310
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A ++L M YG P+ YN ++ C A+R A L+ EM + + T+N+
Sbjct: 311 LEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNI 370
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + + L +M+ GC+P+ + ++ ++ ++ A+ L M G
Sbjct: 371 LVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACG 430
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ ++ LC + V+AE +MIE+G P+ V+F +
Sbjct: 431 CRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTV 476
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 116/252 (46%), Gaps = 4/252 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G PD+++Y +I+ +CK+ +++A +++ M P+ ISYT ++ GL +
Sbjct: 391 MLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAER 450
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A D++ +M E GC P+ +N I C + A L+ +M+ G SP+ +Y+
Sbjct: 451 WVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYST 510
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + L M+ G PNT + ++ ++ +Q+++++ +
Sbjct: 511 VIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVT 570
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF----RRIKALMELANKQ 236
S ++ + + LC G A + M+ G P++ ++ R + + + Q
Sbjct: 571 IRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLASEGFVKEAQ 630
Query: 237 EALQNLSNKMAL 248
E L L +K AL
Sbjct: 631 EMLTELCSKGAL 642
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 100/228 (43%), Gaps = 5/228 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCK---DRQVEKAYKIVEKMRDEDISPDVISYTSIIGGL-G 56
MR G P Y+ +++ C A ++++ + + DV + ++ +
Sbjct: 141 MRRRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCD 200
Query: 57 LVGQPDKARDVLKEM-KEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNA 115
G D+A +L+++ +GC PD +YNA ++ C+AKR LM+EMV G PN
Sbjct: 201 QGGSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNV 260
Query: 116 TTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWND 175
T+N + + +M+ GC P+ + ++ ++ +E+A ++ +
Sbjct: 261 VTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDR 320
Query: 176 MVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
M G ++ + + LC + +AE+ EM + V+F
Sbjct: 321 MPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTF 368
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/274 (20%), Positives = 97/274 (35%), Gaps = 43/274 (15%)
Query: 13 YNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMK 72
YN ++ YC+ Q+ A ++ + + P+ +Y ++ L G+ A VL EM+
Sbjct: 86 YNAMVSGYCRAGQLASARRLAASV---PVPPNAYTYFPVVRALCARGRIADALSVLDEMR 142
Query: 73 EYGCYPDAAAYNAAIRNYC--------------------------------IAKRLRDAS 100
GC P Y+ + C + + D
Sbjct: 143 RRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQG 202
Query: 101 GLMDEMVEK--------GLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS 152
G +DE + G P+ +YN + + +L M+ GC PN +
Sbjct: 203 GSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVT 262
Query: 153 CMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMI 212
L+ R E Q+ MV+ G I + + D +C G L A + M
Sbjct: 263 FNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMP 322
Query: 213 EKGHKPSQVSFRRIKALMELANKQEALQNLSNKM 246
G KP+ V + + + A + E + L +M
Sbjct: 323 SYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEM 356
>gi|255579214|ref|XP_002530453.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529998|gb|EEF31923.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 391
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 111/215 (51%), Gaps = 3/215 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV D+ SY+ +D+ CK + KA K+ ++M+ + + DV+SY ++ +GL
Sbjct: 163 MDQKGVHKDLHSYSIYMDIVCKGGKPWKAVKLYKEMKRKGMKLDVVSYNIVVRAVGLSEG 222
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A V +EMKE GC P+ YN I+ C R+++A ++D+M +KG+ + TY+
Sbjct: 223 VDFAMRVYREMKELGCMPNVVTYNTIIKLLCETGRVKEAYKMLDDMRKKGIVADVITYHC 282
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
FFR ++ W L+ RM+ +G P + + L++ R + L +W M E+G
Sbjct: 283 FFRCLEKPKEIL--W-LFDRMIESGVQPRMDTYVMLMRKFGRWGFLRPVLLVWKKMEEQG 339
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
+ L D L G L A + EM+ KG
Sbjct: 340 CSPDEFAYNALIDALVQKGMLHMARRYEEEMLAKG 374
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 96/216 (44%), Gaps = 4/216 (1%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDE-DISPDVISYTSIIGGLGLVGQPDKARDV 67
D S+ LID C+ + V ++ ++ + DI Y I+ G +G K R+
Sbjct: 100 DETSFCNLIDALCEHKHVIESQELCFGNNNGIDIVNKTKIYNMILRGWFKMGWWSKCREF 159
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
+EM + G + D +Y+ + C + A L EM KG+ + +YN+ R
Sbjct: 160 WEEMDQKGVHKDLHSYSIYMDIVCKGGKPWKAVKLYKEMKRKGMKLDVVSYNIVVRAVGL 219
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
S + + +Y M GC+PN + ++KL +V+ A ++ +DM +KG + ++
Sbjct: 220 SEGVDFAMRVYREMKELGCMPNVVTYNTIIKLLCETGRVKEAYKMLDDMRKKGIVADVIT 279
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
F L K E F MIE G +P ++
Sbjct: 280 YHCFFRCL---EKPKEILWLFDRMIESGVQPRMDTY 312
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 65/144 (45%), Gaps = 32/144 (22%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISY------------ 48
M+E+G P++V+YN +I + C+ +V++AYK+++ MR + I DVI+Y
Sbjct: 233 MKELGCMPNVVTYNTIIKLLCETGRVKEAYKMLDDMRKKGIVADVITYHCFFRCLEKPKE 292
Query: 49 --------------------TSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIR 88
++ G G V K+M+E GC PD AYNA I
Sbjct: 293 ILWLFDRMIESGVQPRMDTYVMLMRKFGRWGFLRPVLLVWKKMEEQGCSPDEFAYNALID 352
Query: 89 NYCIAKRLRDASGLMDEMVEKGLS 112
L A +EM+ KGLS
Sbjct: 353 ALVQKGMLHMARRYEEEMLAKGLS 376
>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62930, chloroplastic; Flags: Precursor
gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 119/224 (53%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E + P++V+++ LID + K+ ++ +A K+ ++M I PD+ +Y+S+I G + +
Sbjct: 316 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 375
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A+ + + M C+P+ YN I+ +C AKR+ + L EM ++GL N TYN
Sbjct: 376 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNT 435
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ + + D + ++ +M+ G P+ + + L LCK K+E AL ++ + +
Sbjct: 436 LIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCK-YGKLEKALVVFEYLQKS 494
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I +++ + +C GK+ + F + KG KP+ + +
Sbjct: 495 KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIY 538
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 106/223 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++G +PDIV+ + L++ YC +++ +A +V++M + P+ +++ ++I GL L +
Sbjct: 141 MMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNK 200
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++ M GC PD Y + C + A L+ +M + + + Y
Sbjct: 201 ASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTT 260
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++ + NL+ M G PN + L++ + A +L +DM+E+
Sbjct: 261 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 320
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ L D GKLVEAEK + EMI++ P ++
Sbjct: 321 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 363
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 110/223 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + ++ D+V Y +ID C + V A + +M ++ I P+V++Y S+I L G+
Sbjct: 246 MEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGR 305
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +L +M E P+ ++A I + +L +A L DEM+++ + P+ TY+
Sbjct: 306 WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 365
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + L + +++ M+ C PN + L+K + ++VE ++L+ +M ++G
Sbjct: 366 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRG 425
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + L L G A+K F +M+ G P +++
Sbjct: 426 LVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITY 468
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 105/220 (47%), Gaps = 2/220 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P IV +N L+ K + + + E+M++ IS D+ SY +I Q A V
Sbjct: 78 PSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAV 137
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L +M + G PD ++ + YC KR+ +A L+D+M PN T+N +
Sbjct: 138 LGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFL 197
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYIL 186
N + L RM+ GC P+ + +V LCKR + +++AL L M + + ++
Sbjct: 198 HNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGD-IDLALSLLKKMEKGKIEADVV 256
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + D LC+ + +A F EM KG +P+ V++ +
Sbjct: 257 IYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 296
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 85/174 (48%), Gaps = 2/174 (1%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P++V+YN LI +CK ++VE+ ++ +M + + ++Y ++I GL G D A+ +
Sbjct: 393 PNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKI 452
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
K+M G PD Y+ + C +L A + + + + + P+ TYN+
Sbjct: 453 FKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCK 512
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKG 180
+ + W+L+C + G PN ++ C++ K E A L+ +M E G
Sbjct: 513 AGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEE-ADALFREMKEDG 565
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 99/212 (46%), Gaps = 4/212 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ + V+YN LI + + A KI +KM + + PD+I+Y+ ++ GL G+
Sbjct: 421 MSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGK 480
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA V + +++ PD YN I C A ++ D L + KG+ PN Y
Sbjct: 481 LEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTT 540
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + L+ M G LPN+ + L++ R + +L +M G
Sbjct: 541 MISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCG 600
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMI 212
F ++ ++L D G+L EKS+LEM+
Sbjct: 601 FVGDASTISMVINMLHD-GRL---EKSYLEML 628
>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 114/221 (51%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
V+P++V Y+ +ID CKD+ V A+ + +M + ISP+V++Y+++I G VGQ A
Sbjct: 193 VQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAI 252
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
D+ +M PD +N + +C ++++ + M+++G+ PN TY +
Sbjct: 253 DLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGY 312
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
++ + ++ M G P+ QS L+ + +KV+ A+ L+ +M K +
Sbjct: 313 CLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDV 372
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + L D LC +GK+ A K EM ++G P +++ I
Sbjct: 373 VTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSI 413
Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 110/226 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+KP++V+Y L+D YC ++V KA I+ M ++PD+ SY +I G + +
Sbjct: 293 MMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKK 352
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A ++ KEM PD YN+ I C ++ A L+DEM ++G+ P+ TY+
Sbjct: 353 VDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSS 412
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++ + + L ++ G PN + L+ + ++E A ++ D++ KG
Sbjct: 413 ILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKG 472
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + V+ C+ G EA +M + P V++ I
Sbjct: 473 YNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEII 518
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 110/252 (43%), Gaps = 37/252 (14%)
Query: 1 MREMGVKPDIVSY-----------------------------------NCLIDVYCKDRQ 25
M G+ P++V+Y N L+D +CKD +
Sbjct: 223 MVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGK 282
Query: 26 VEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNA 85
+++ + M + I P+V++Y S++ G LV + +KA+ +L M + G PD +YN
Sbjct: 283 MKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNI 342
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
I +C K++ +A L EM K + P+ TYN + + L M G
Sbjct: 343 LIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRG 402
Query: 146 CLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEA 204
P+ + L LCK + V+ A+ L + ++G + +L D LC G+L +A
Sbjct: 403 VPPDIITYSSILDALCKNHQ-VDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDA 461
Query: 205 EKSFLEMIEKGH 216
F +++ KG+
Sbjct: 462 HNIFEDLLVKGY 473
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 109/239 (45%), Gaps = 3/239 (1%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
MG + D V Y LI CK + A ++ ++ + P+V+ Y++II G+ +
Sbjct: 156 MGFQLDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVND 215
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
A D+ EM G P+ Y+A I + +L+DA L ++M+ + + P+ T+N+
Sbjct: 216 AFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVD 275
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
F ++ ++ MM G PN + C + C +E V A + M ++G
Sbjct: 276 GFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKE-VNKAKSILYTMSQRGVN 334
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQ 240
I ++L D C + K+ EA F EM K P V++ I L +L AL+
Sbjct: 335 PDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALK 393
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 101/221 (45%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
MG P+ +++ LI C Q+ +A + + D + Y ++I GL VG+
Sbjct: 121 MGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRA 180
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
A D+L+ + P+ Y+ I C K + DA L EMV KG+SPN TY+
Sbjct: 181 ALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALIS 240
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
F+ L+ + +L+ +M+ P+ + LV + K++ ++ M+++G
Sbjct: 241 GFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKP 300
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
++ L D C + ++ +A+ M ++G P S+
Sbjct: 301 NVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYN 341
>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63080, mitochondrial; Flags: Precursor
gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 614
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 128/261 (49%), Gaps = 4/261 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E + P++V++N LID + K+ ++ +A K+ ++M I P++++Y S+I G + +
Sbjct: 301 MLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDR 360
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A+ + M C PD YN I +C AK++ D L +M +GL N TY
Sbjct: 361 LDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTT 420
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F+ ++D ++ ++ +M+ G PN + L+ + K+E A+ ++ + +
Sbjct: 421 LIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSK 480
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
I +++ + +C GK+ + F + KG KP +++ I + K+EA
Sbjct: 481 MEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEA- 539
Query: 240 QNLSNKMALFGPSMIPKREEY 260
L KM GP +P Y
Sbjct: 540 YTLFIKMKEDGP--LPDSGTY 558
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 108/226 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + ++ D+V Y+ +ID CK R V+ A + +M ++ I PDV +Y+S+I L G+
Sbjct: 231 MEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGR 290
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +L +M E P+ +N+ I + +L +A L DEM+++ + PN TYN
Sbjct: 291 WSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNS 350
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + L + ++ M+ CLP+ + L+ + +KV ++L+ DM +G
Sbjct: 351 LINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRG 410
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ L A+ F +M+ G P+ +++ +
Sbjct: 411 LVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTL 456
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 113/230 (49%), Gaps = 8/230 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M EMG +PD V++ L+ + + +A +VE+M + PD+++Y ++I GL G+
Sbjct: 161 MVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGE 220
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
PD A ++L +M++ D Y+ I + C + + DA L EM KG+ P+ TY+
Sbjct: 221 PDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSS 280
Query: 121 FFRVF----YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDM 176
WS+ R L M+ PN + L+ ++ K+ A +L+++M
Sbjct: 281 LISCLCNYGRWSDASR----LLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEM 336
Query: 177 VEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+++ I+ + L + C +L EA++ F M+ K P V++ +
Sbjct: 337 IQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTL 386
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 108/226 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++G P IV+ N L++ +C ++ +A +V++M + PD +++T+++ GL +
Sbjct: 126 MMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNK 185
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A +++ M GC PD Y A I C A L+++M + + + Y+
Sbjct: 186 ASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYST 245
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + NL+ M G P+ + L+ + A +L +DM+E+
Sbjct: 246 VIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERK 305
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ + L D GKL+EAEK F EMI++ P+ V++ +
Sbjct: 306 INPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSL 351
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 106/222 (47%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G +PD+V+Y +I+ CK + + A ++ KM I DV+ Y+++I L D A
Sbjct: 200 GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDA 259
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++ EM G PD Y++ I C R DAS L+ +M+E+ ++PN T+N
Sbjct: 260 LNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDA 319
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
F L + L+ M+ PN + L+ ++++ A Q++ MV K
Sbjct: 320 FAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPD 379
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ + L + C K+V+ + F +M +G + V++ +
Sbjct: 380 VVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTL 421
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 101/220 (45%), Gaps = 2/220 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P IV ++ L+ K ++ + EKM +S ++ +Y +I L Q A +
Sbjct: 63 PSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAI 122
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L +M + G P N+ + +C R+ +A L+D+MVE G P+ T+ +
Sbjct: 123 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 182
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYIL 186
N + L RM+ GC P+ + ++ LCKR E ++AL L N M + + ++
Sbjct: 183 HNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP-DLALNLLNKMEKGKIEADVV 241
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + D LC + +A F EM KG +P ++ +
Sbjct: 242 IYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSL 281
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 69/144 (47%), Gaps = 5/144 (3%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV P+I++YN L+D CK+ ++EKA + E ++ + PD+ +Y + G+ G+ +
Sbjct: 445 GVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDG 504
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
D+ + G PD AYN I +C +A L +M E G P++ TYN R
Sbjct: 505 WDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRA 564
Query: 125 FYWSNDLRSSWNLY-----CRMMG 143
D +S L CR G
Sbjct: 565 HLRDGDKAASAELIKEMRSCRFAG 588
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 100/216 (46%), Gaps = 12/216 (5%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ + V+Y LI + + + A + ++M + + P++++Y +++ GL G+
Sbjct: 406 MSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGK 465
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA V + +++ PD YN C A ++ D L + KG+ P+ YN
Sbjct: 466 LEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNT 525
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F ++ L+ +M G LP++ + L++ R + +L +M
Sbjct: 526 MISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCR 585
Query: 181 FG----SYILVSDVLFDLLCDMGKLVEAEKSFLEMI 212
F +Y LV+D+L D G+L +K FLE++
Sbjct: 586 FAGDASTYGLVTDMLHD-----GRL---DKGFLEVL 613
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/163 (20%), Positives = 67/163 (41%)
Query: 88 RNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCL 147
RN + +L +A L EMV+ P+ ++ + +M G
Sbjct: 38 RNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVS 97
Query: 148 PNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKS 207
N + ++ R+ ++ AL + M++ G+G I+ + L + C ++ EA
Sbjct: 98 HNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVAL 157
Query: 208 FLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFG 250
+M+E G++P V+F + + NK L +M + G
Sbjct: 158 VDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG 200
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 75/186 (40%), Gaps = 2/186 (1%)
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
D+A D+ EM + +P ++ + K+ ++M G+S N TYN+
Sbjct: 47 DEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIM 106
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
+ L + + +MM G P+ + L+ ++ A+ L + MVE G+
Sbjct: 107 INCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 166
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQ 240
+ L L K EA M+ KG +P V++ I L + AL
Sbjct: 167 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL- 225
Query: 241 NLSNKM 246
NL NKM
Sbjct: 226 NLLNKM 231
>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
and contains a RepB PF|01051 protein and multiple PPR
PF|01535 repeats [Arabidopsis thaliana]
Length = 613
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 119/224 (53%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E + P++V+++ LID + K+ ++ +A K+ ++M I PD+ +Y+S+I G + +
Sbjct: 300 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 359
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A+ + + M C+P+ YN I+ +C AKR+ + L EM ++GL N TYN
Sbjct: 360 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNT 419
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ + + D + ++ +M+ G P+ + + L LCK K+E AL ++ + +
Sbjct: 420 LIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYG-KLEKALVVFEYLQKS 478
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I +++ + +C GK+ + F + KG KP+ + +
Sbjct: 479 KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIY 522
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 106/223 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++G +PDIV+ + L++ YC +++ +A +V++M + P+ +++ ++I GL L +
Sbjct: 125 MMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNK 184
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++ M GC PD Y + C + A L+ +M + + + Y
Sbjct: 185 ASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTT 244
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++ + NL+ M G PN + L++ + A +L +DM+E+
Sbjct: 245 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 304
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ L D GKLVEAEK + EMI++ P ++
Sbjct: 305 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 347
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 110/223 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + ++ D+V Y +ID C + V A + +M ++ I P+V++Y S+I L G+
Sbjct: 230 MEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGR 289
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +L +M E P+ ++A I + +L +A L DEM+++ + P+ TY+
Sbjct: 290 WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 349
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + L + +++ M+ C PN + L+K + ++VE ++L+ +M ++G
Sbjct: 350 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRG 409
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + L L G A+K F +M+ G P +++
Sbjct: 410 LVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITY 452
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 105/220 (47%), Gaps = 2/220 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P IV +N L+ K + + + E+M++ IS D+ SY +I Q A V
Sbjct: 62 PSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAV 121
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L +M + G PD ++ + YC KR+ +A L+D+M PN T+N +
Sbjct: 122 LGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFL 181
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYIL 186
N + L RM+ GC P+ + +V LCKR + +++AL L M + + ++
Sbjct: 182 HNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGD-IDLALSLLKKMEKGKIEADVV 240
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + D LC+ + +A F EM KG +P+ V++ +
Sbjct: 241 IYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 280
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 85/174 (48%), Gaps = 2/174 (1%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P++V+YN LI +CK ++VE+ ++ +M + + ++Y ++I GL G D A+ +
Sbjct: 377 PNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKI 436
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
K+M G PD Y+ + C +L A + + + + + P+ TYN+
Sbjct: 437 FKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCK 496
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKG 180
+ + W+L+C + G PN ++ C++ K E A L+ +M E G
Sbjct: 497 AGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEE-ADALFREMKEDG 549
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 99/212 (46%), Gaps = 4/212 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ + V+YN LI + + A KI +KM + + PD+I+Y+ ++ GL G+
Sbjct: 405 MSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGK 464
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA V + +++ PD YN I C A ++ D L + KG+ PN Y
Sbjct: 465 LEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTT 524
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + L+ M G LPN+ + L++ R + +L +M G
Sbjct: 525 MISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCG 584
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMI 212
F ++ ++L D G+L EKS+LEM+
Sbjct: 585 FVGDASTISMVINMLHD-GRL---EKSYLEML 612
>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 1219
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 110/226 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ P++V+Y+ +I CK + ++KA +++ M + P+ +Y SI+ G GQ
Sbjct: 225 MLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQ 284
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
P +A LK+M G PD YN+ + C R +A + D M ++GL P TTY
Sbjct: 285 PKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGT 344
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + L L M+ G PN L+ +Q KV+ A+ +++ M ++G
Sbjct: 345 LLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQG 404
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + +LC G++ +A + F +MI++ P + + +
Sbjct: 405 LNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSL 450
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 110/217 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G+ PD V+Y +I + CK +VE A + E+M DE +SP I Y S+I L + +
Sbjct: 400 MRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDK 459
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA++++ EM + G D +N+ I ++C R+ ++ L D MV G+ P+ TY+
Sbjct: 460 WDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYST 519
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + + L M+ G P+ + L+ + ++E AL L+ +M G
Sbjct: 520 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSG 579
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHK 217
I+ +++ L + A++ ++ + E G +
Sbjct: 580 VSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQ 616
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 105/226 (46%), Gaps = 4/226 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDE--DISPDVISYTSIIGGLGLV 58
M ++G P++ SYN L+ C + + ++A ++++ M D+ D PDV+SYT++I G
Sbjct: 153 MTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKE 212
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
G DKA EM + G P+ Y++ I C A+ + A ++ MV+ G+ PN TY
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMV 177
N + S + + +M G P+ + L+ LCK E A ++++ M
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTE-ARKMFDSMT 331
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++G I L G LVE M+ G P+ F
Sbjct: 332 KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVF 377
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 108/215 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV P+ +YN ++ YC Q ++A ++KM + + PDV++Y S++ L G+
Sbjct: 260 MVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGR 319
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR + M + G P+ Y ++ Y L + GL+D MV G+ PN +++
Sbjct: 320 CTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSI 379
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + ++ +M G P+T + ++ + + +VE A++ + M+++
Sbjct: 380 LICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDER 439
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
+V + L LC K +A++ LEM+++G
Sbjct: 440 LSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG 474
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 108/257 (42%), Gaps = 40/257 (15%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
V P++ +Y LI C +++ + + + + D I++T ++ GL + A
Sbjct: 87 VTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAM 146
Query: 66 D-VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKG--LSPNATTYNLFF 122
D VL+ M + GC P+ +YN ++ C R ++A L+ M + G P+ +Y
Sbjct: 147 DIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVI 206
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKG- 180
F+ DL ++ Y M+ G LPN + + LCK Q ++ A+++ MV+ G
Sbjct: 207 NGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQ-AMDKAMEVLTSMVKNGV 265
Query: 181 ------FGSY----------------------------ILVSDVLFDLLCDMGKLVEAEK 206
+ S ++ + L D LC G+ EA K
Sbjct: 266 MPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARK 325
Query: 207 SFLEMIEKGHKPSQVSF 223
F M ++G KP ++
Sbjct: 326 MFDSMTKRGLKPEITTY 342
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 103/226 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ P+ ++ LI Y K +V++A + KMR + ++PD ++Y ++IG L G+
Sbjct: 365 MVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGR 424
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A ++M + P YN+ I + CI + A L+ EM+++G+ + +N
Sbjct: 425 VEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNS 484
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ S L+ M+ G P+ + L+ K++ A +L MV G
Sbjct: 485 IIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVG 544
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + L + C + ++ +A F EM G P +++ I
Sbjct: 545 MKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNII 590
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 64/123 (52%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +GVKPDI++Y+ LID YC ++++A K++ M + PD ++Y ++I G + +
Sbjct: 505 MVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISR 564
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A + +EM+ G PD YN ++ +R A L + E G +TYN+
Sbjct: 565 MEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNI 624
Query: 121 FFR 123
Sbjct: 625 ILH 627
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 59/131 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+ E G + ++ +YN ++ CK+ ++A ++ + + D+ + ++ +IG L VG+
Sbjct: 610 ITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGR 669
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A+D+ + G PD Y+ N L + L M E G + N+ N
Sbjct: 670 NDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNS 729
Query: 121 FFRVFYWSNDL 131
R D+
Sbjct: 730 IVRKLLQRGDI 740
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 80/197 (40%), Gaps = 4/197 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV PDI++YN ++ + R+ A ++ + + ++ +Y I+ GL
Sbjct: 575 MESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNL 634
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + + + + +N I R +A L + GL P+ TY+L
Sbjct: 635 TDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSL 694
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMV-E 178
L +L+ M GC N++ +V KL +R + L+ M+ E
Sbjct: 695 MAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLF--MIDE 752
Query: 179 KGFGSYILVSDVLFDLL 195
K F + + DLL
Sbjct: 753 KHFSLEASTASLFLDLL 769
>gi|125548468|gb|EAY94290.1| hypothetical protein OsI_16061 [Oryza sativa Indica Group]
Length = 586
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 103/199 (51%), Gaps = 1/199 (0%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
PD+ S+N +I C+ QV+KA ++VE+M + SPD +++ I+ GL + + +
Sbjct: 251 SPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHE 310
Query: 67 VLKEMKEYG-CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
VL+ ++ G C P+ + + I YC A +L DA + ++MV G+ PN TYN+ +
Sbjct: 311 VLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGY 370
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
DL S+ +Y +M C P+ + L+ R +++ AL++W+DM + +
Sbjct: 371 GKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNV 430
Query: 186 LVSDVLFDLLCDMGKLVEA 204
++ LC + EA
Sbjct: 431 YTFSIIIHSLCKQNRSDEA 449
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 103/225 (45%), Gaps = 2/225 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKM-RDEDISPDVISYTSIIGGLGLVG 59
M E G PD V++N ++D C+ +V + ++++ ++ RD P+V+++TS+I G G
Sbjct: 280 MNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAG 339
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ + A V +M G P+ YN I Y L A + +M P+ T++
Sbjct: 340 KLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFS 399
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDM-VE 178
+ L + ++ M PN + ++ +Q + + A+ L N++ +
Sbjct: 400 SLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAICLLNELNLR 459
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + + D+LC GK+ EA M EKG +P + ++
Sbjct: 460 PDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTY 504
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 95/220 (43%), Gaps = 9/220 (4%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P++V++ +I YCK ++E A + M I P+ ++Y +I G G VG A +V
Sbjct: 323 PNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEV 382
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
++M C PD +++ I YC +L DA + +M + + PN T+++
Sbjct: 383 YQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCK 442
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-----LCKRQEKVEIALQLWNDMVEKGFG 182
N S C + P+ F+ LCK KV+ A + M EKG
Sbjct: 443 QN---RSDEAICLLNELNLRPDIAPQAFIYNPVIDVLCK-CGKVDEANLIRKGMEEKGCR 498
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
+L C ++ EA F EM+E G P ++
Sbjct: 499 PDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSIT 538
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 65/123 (52%), Gaps = 1/123 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMR-DEDISPDVISYTSIIGGLGLVG 59
M + ++P++ +++ +I CK + ++A ++ ++ DI+P Y +I L G
Sbjct: 421 MAQHRIQPNVYTFSIIIHSLCKQNRSDEAICLLNELNLRPDIAPQAFIYNPVIDVLCKCG 480
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ D+A + K M+E GC PD Y I YC+ R+ +A EMVE G SP++ T N
Sbjct: 481 KVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVN 540
Query: 120 LFF 122
F
Sbjct: 541 CFI 543
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 87/181 (48%), Gaps = 1/181 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ P+ V+YN LI+ Y K + A ++ ++M PDV++++S+I G GQ
Sbjct: 351 MVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQ 410
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEM-VEKGLSPNATTYN 119
D A + +M ++ P+ ++ I + C R +A L++E+ + ++P A YN
Sbjct: 411 LDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAICLLNELNLRPDIAPQAFIYN 470
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
V + + + M GC P+ + L+ + ++ A+ +++MVE
Sbjct: 471 PVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEA 530
Query: 180 G 180
G
Sbjct: 531 G 531
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/258 (20%), Positives = 101/258 (39%), Gaps = 38/258 (14%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDE-DISPDVISYTSIIGGLGLVGQPD 62
+ + P S +I V C+ + A ++ ++M SPD + ++ D
Sbjct: 141 LSITPSAHSCQQIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLSFLVSSCTCANLLD 200
Query: 63 KARDVLKEMKEYGCYPDAAAY------------------------------------NAA 86
+ +L + E+GC +A AY N
Sbjct: 201 ASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVV 260
Query: 87 IRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG- 145
I+ C +++ A L++ M E G SP+ T+N+ +N++ + R+ G
Sbjct: 261 IKGVCRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGV 320
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
C+PN + ++ + K+E A+ ++NDMV G + +VL + +G L A
Sbjct: 321 CMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAV 380
Query: 206 KSFLEMIEKGHKPSQVSF 223
+ + +M P V+F
Sbjct: 381 EVYQQMTRLRCPPDVVTF 398
Score = 40.8 bits (94), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 33/69 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G +PD +Y LI YC ++ +A +M + SPD I+ I L G
Sbjct: 492 MEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAGM 551
Query: 61 PDKARDVLK 69
P++ V++
Sbjct: 552 PNEVDHVMR 560
>gi|125548803|gb|EAY94625.1| hypothetical protein OsI_16402 [Oryza sativa Indica Group]
Length = 769
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 114/239 (47%), Gaps = 16/239 (6%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD +Y+ +I C +VEKA+ + ++M+ ++PDV +YT +I G
Sbjct: 448 MMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGL 507
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A+ + +EM+ GC P Y A I Y AK++ A+ + MV+ G PN TY
Sbjct: 508 IEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGA 567
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTG----------------CLPNTQSCMFLVKLCKRQE 164
+ ++ ++ +Y +++GT PN + LV +
Sbjct: 568 LVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAH 627
Query: 165 KVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
KV+ A +L + M+ G +V D L D C GK+ A++ FL+M + G+ PS ++
Sbjct: 628 KVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTY 686
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 110/239 (46%), Gaps = 16/239 (6%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR +G P +V+Y LI Y K +QV +A I +M D P+ ++Y +++ GL G
Sbjct: 518 MRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGN 577
Query: 61 PDKARDVLKEM----------------KEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMD 104
KA +V ++ + P+ Y A + C A ++ A L+D
Sbjct: 578 ISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLD 637
Query: 105 EMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQE 164
M+ G PN Y+ F + + S+ ++ +M G LP+ + L+ +
Sbjct: 638 AMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDG 697
Query: 165 KVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++++A+++ + M++ ++ + D LC +G+ +A K M EKG P+ V++
Sbjct: 698 RLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTY 756
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 97/211 (45%), Gaps = 16/211 (7%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKM------RDED----------ISPD 44
M + G +P+ V+Y L+D CK + KA+++ K+ D D ++P+
Sbjct: 553 MVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPN 612
Query: 45 VISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMD 104
V++Y +++ GL + D A ++L M GC P+ Y+A I +C A ++ A +
Sbjct: 613 VVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFL 672
Query: 105 EMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQE 164
+M + G P+ TY + L + + +M+ C PN + ++ R
Sbjct: 673 QMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIG 732
Query: 165 KVEIALQLWNDMVEKGFGSYILVSDVLFDLL 195
+ E AL+L + M EKG ++ L D L
Sbjct: 733 ESEKALKLLSLMEEKGCSPNVVTYTALIDGL 763
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 110/259 (42%), Gaps = 15/259 (5%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G D + C CK+ + A ++E+ ED D + T +I GL
Sbjct: 235 MSESGFCMDRFTVGCFAHALCKEGRWADALDMIER---EDFKLDTVLCTHMISGLMEASY 291
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A L M+ C P+ Y + + K+L +++ M+ +G +PN + +N
Sbjct: 292 FDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNS 351
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPN-TQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ D ++ L RM GC P +F+ +C QEK+ L D+ EK
Sbjct: 352 LVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICG-QEKLPSPDLL--DLAEK 408
Query: 180 GFGSYILVSDVLFDL--------LCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALME 231
+G + + VL + LC +GK +A + EM+ KG P ++ ++ +
Sbjct: 409 IYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLC 468
Query: 232 LANKQEALQNLSNKMALFG 250
A K E L +M + G
Sbjct: 469 HATKVEKAFLLFQEMKMVG 487
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 98/249 (39%), Gaps = 11/249 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P+ +N L+ YC ++ AYK++ +M P + Y IG + GQ
Sbjct: 337 MMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSI--CGQ 394
Query: 61 P--------DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLS 112
D A + EM C + R C + A L+ EM+ KG
Sbjct: 395 EKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFV 454
Query: 113 PNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQL 172
P+ +TY+ + + ++ L+ M G P+ + L+ + +E A L
Sbjct: 455 PDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWL 514
Query: 173 WNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALME 231
+ +M G ++ L ++ +A F M++ G +P+ V++ + L +
Sbjct: 515 FEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCK 574
Query: 232 LANKQEALQ 240
N +A +
Sbjct: 575 AGNISKAFE 583
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 83/203 (40%), Gaps = 6/203 (2%)
Query: 27 EKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAA 86
++A + +MR P+V++Y +++ G Q + ++ M GC P+ + +N+
Sbjct: 293 DEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSL 352
Query: 87 IRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRS------SWNLYCR 140
+ +YC K A L++ M G P YN+F L S + +Y
Sbjct: 353 VHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGE 412
Query: 141 MMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGK 200
M+ C+ N + + K + A QL +M+ KGF + LC K
Sbjct: 413 MLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATK 472
Query: 201 LVEAEKSFLEMIEKGHKPSQVSF 223
+ +A F EM G P ++
Sbjct: 473 VEKAFLLFQEMKMVGVTPDVYTY 495
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 35/49 (71%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLG 56
P++V+Y +ID C+ + EKA K++ M ++ SP+V++YT++I GLG
Sbjct: 716 PNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLG 764
>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
Length = 629
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 119/224 (53%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E + P++V+++ LID + K+ ++ +A K+ ++M I PD+ +Y+S+I G + +
Sbjct: 316 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 375
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A+ + + M C+P+ YN I+ +C AKR+ + L EM ++GL N TYN
Sbjct: 376 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNT 435
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ + + D + ++ +M+ G P+ + + L LCK K+E AL ++ + +
Sbjct: 436 LIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYG-KLEKALVVFEYLQKS 494
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I +++ + +C GK+ + F + KG KP+ + +
Sbjct: 495 KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIY 538
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 111/223 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + ++ D+V YN +ID CK + ++ A+ + KM + I PDV +Y S+I L G+
Sbjct: 246 MEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGR 305
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +L M E P+ ++A I + +L +A L DEM+++ + P+ TY+
Sbjct: 306 WSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 365
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + L + +++ M+ C PN + L+K + ++VE ++L+ +M ++G
Sbjct: 366 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRG 425
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + L L G A+K F +M+ G P +++
Sbjct: 426 LVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITY 468
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 109/226 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++G +PDIV+ + L++ YC +++ A +V++M + PD +++ ++I GL L +
Sbjct: 141 MMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNK 200
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++ +M + GC PD Y A + C + A L+ +M + + + YN
Sbjct: 201 ASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNT 260
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ L+ +M G P+ + L+ + A +L ++M+E+
Sbjct: 261 IIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERK 320
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ L D GKLVEAEK + EMI++ P ++ +
Sbjct: 321 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 366
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 115/239 (48%), Gaps = 3/239 (1%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P IV +N L+ K ++ + + E+M++ IS D+ SY +I Q A V
Sbjct: 78 PSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAV 137
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L +M + G PD ++ + YC +KR+ DA L+D+MVE G P+ T+N +
Sbjct: 138 LGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFL 197
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYIL 186
N + L +M+ GC P+ + +V LCKR + +++AL L M + + ++
Sbjct: 198 HNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGD-IDLALSLLKKMEKGKIEADVV 256
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLSN 244
+ + + D LC + +A F +M KG +P ++ I L +A + LSN
Sbjct: 257 IYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSN 315
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 105/224 (46%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ + + D+ SYN LI+ +C+ Q+ A ++ KM PD+++ +S++ G +
Sbjct: 106 MQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKR 165
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A ++ +M E G PD +N I + + +A L+D+MV++G P+ TY
Sbjct: 166 ISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGA 225
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
D+ + +L +M + ++ LCK + ++ A L+N M K
Sbjct: 226 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKH-IDDAFALFNKMETK 284
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G + + L LC+ G+ +A + MIE+ P+ V+F
Sbjct: 285 GIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTF 328
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 85/174 (48%), Gaps = 2/174 (1%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P++V+YN LI +CK ++VE+ ++ +M + + ++Y ++I GL G D A+ +
Sbjct: 393 PNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKI 452
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
K+M G PD Y+ + C +L A + + + + + P+ TYN+
Sbjct: 453 FKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCK 512
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKG 180
+ + W+L+C + G PN ++ C++ K E A L+ +M E G
Sbjct: 513 AGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEE-ADALFREMKEDG 565
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 98/212 (46%), Gaps = 4/212 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ + V+YN LI + + A KI +KM + + PD+I+Y+ ++ GL G+
Sbjct: 421 MSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGK 480
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA V + +++ PD YN I C A ++ D L + KG+ PN Y
Sbjct: 481 LEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTT 540
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + L+ M G LP++ L++ R + +L +M G
Sbjct: 541 MISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCG 600
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMI 212
F ++ ++L D G+L EKS+LEM+
Sbjct: 601 FVGDASTISMVINMLHD-GRL---EKSYLEML 628
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 75/179 (41%), Gaps = 3/179 (1%)
Query: 75 GCYPDAAAYN---AAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDL 131
G Y AA+Y+ RN + +L DA GL EMV+ P+ +N
Sbjct: 37 GVYFSAASYDYREKLSRNALLNLKLDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKF 96
Query: 132 RSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVL 191
+L RM + S L+ R+ ++ +AL + M++ G+ I+ L
Sbjct: 97 DLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSL 156
Query: 192 FDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFG 250
+ C ++ +A +M+E G+KP V+F + + L NK L ++M G
Sbjct: 157 LNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRG 215
>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Glycine max]
Length = 1113
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 126/246 (51%), Gaps = 4/246 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G+ P++ +YN LI R++++A ++ M ++P SY I G +G
Sbjct: 393 MRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGD 452
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
P+KA D ++MK+ G P AA NA++ + R+R+A + +++ GLSP++ TYN+
Sbjct: 453 PEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNM 512
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + + + L M+ GC P+ L+ + +V+ A Q++ + +
Sbjct: 513 MMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLK 572
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
++ ++L L GKL++A F M E G P+ V+F AL++ K +A+
Sbjct: 573 LAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTF---NALLDCLCKNDAV- 628
Query: 241 NLSNKM 246
+L+ KM
Sbjct: 629 DLALKM 634
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 121/249 (48%), Gaps = 2/249 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G KP+I+++N +I K + KA + ++ D SP +Y +IGGL G+ ++A
Sbjct: 853 GCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEA 912
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ +EM +Y C P+ A YN I + A + A L M+++G+ P+ +Y +
Sbjct: 913 MKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVEC 972
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + + + + + + TG P+T S ++ + ++E AL L+++M +G
Sbjct: 973 LFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPE 1032
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLS 243
+ + L + G + +A K F E+ G +P+ ++ I+ + NK A ++
Sbjct: 1033 LYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAF-SVF 1091
Query: 244 NKMALFGPS 252
KM + G S
Sbjct: 1092 KKMMIVGCS 1100
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 99/223 (44%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G PD+V+Y LID C +++KA ++ KMR PD+++Y +++ G G
Sbjct: 288 MEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGD 347
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ + EM+ G PD Y + C + ++ A ++D M +G+ PN TYN
Sbjct: 348 LETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNT 407
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
L + L+ M G P S + + + E AL + M ++G
Sbjct: 408 LISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRG 467
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I + L +MG++ EA+ F ++ G P V++
Sbjct: 468 IMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTY 510
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 99/226 (43%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +GV P SY ID Y K EKA EKM+ I P + + + + L +G+
Sbjct: 428 MESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGR 487
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A+D+ ++ G PD+ YN ++ Y A ++ A+ L+ EM+ +G P+ N
Sbjct: 488 IREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNS 547
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
Y + + +W ++ R+ P + L+ ++ K+ AL L+ M E G
Sbjct: 548 LIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESG 607
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + L D LC + A K F M P +++ I
Sbjct: 608 CPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTI 653
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 115/246 (46%), Gaps = 15/246 (6%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G++P+I +Y I V + +++ AY I++ M DE PDV++YT +I L G+
Sbjct: 253 METLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGK 312
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA+++ +M+ PD Y + + L EM G +P+ TY +
Sbjct: 313 LDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTI 372
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
S + ++++ M G +PN + L+ +++ AL+L+N+M G
Sbjct: 373 LVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLG 432
Query: 181 FG----SYILVSDVLFDLLCDMGKLVEAEK---SFLEMIEKGHKPSQVSFR-RIKALMEL 232
SY+L D GKL + EK +F +M ++G PS + + +L E+
Sbjct: 433 VAPTAYSYVLFIDY-------YGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEM 485
Query: 233 ANKQEA 238
+EA
Sbjct: 486 GRIREA 491
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 115/249 (46%), Gaps = 1/249 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G + SYN LI + ++A K+ ++M E + P + +Y++++ LG
Sbjct: 183 MRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRRD 242
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+L+EM+ G P+ Y IR A R+ DA G++ M ++G P+ TY +
Sbjct: 243 TGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTV 302
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L + LY +M + P+ + + L+ +E + W++M G
Sbjct: 303 LIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADG 362
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
+ ++ +L + LC GK+ +A M +G P+ ++ I L+ L EAL
Sbjct: 363 YAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEAL 422
Query: 240 QNLSNKMAL 248
+ +N +L
Sbjct: 423 ELFNNMESL 431
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 79/152 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G++PD+ SY L++ +V+ A E+++ + PD +SY +I GLG +
Sbjct: 954 MIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRR 1013
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A + EMK G P+ YNA I ++ A + A + +E+ GL PN TYN
Sbjct: 1014 LEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNA 1073
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS 152
R S + +++++ +MM GC PN +
Sbjct: 1074 LIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGT 1105
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 109/241 (45%), Gaps = 1/241 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR KPD+V+Y L+ + +E + +M + +PDV++YT ++ L G+
Sbjct: 323 MRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGK 382
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A D+L M+ G P+ YN I +RL +A L + M G++P A +Y L
Sbjct: 383 VDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVL 442
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + D + + + +M G +P+ +C + ++ A ++ND+ G
Sbjct: 443 FIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCG 502
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
+ +++ G++ +A K EM+ +G +P + I L + EA
Sbjct: 503 LSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAW 562
Query: 240 Q 240
Q
Sbjct: 563 Q 563
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 96/219 (43%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+KP + +Y+ L+ + R ++E+M + P++ +YT I LG G+ D A
Sbjct: 222 GLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDA 281
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+LK M++ GC PD Y I C A +L A L +M P+ TY
Sbjct: 282 YGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSK 341
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
F DL + + M G P+ + LV+ + KV+ A + + M +G
Sbjct: 342 FGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPN 401
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + L L ++ +L EA + F M G P+ S+
Sbjct: 402 LHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSY 440
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 99/243 (40%), Gaps = 1/243 (0%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
+ +G P SYNCL+D E A K+ +M++ P++ +Y ++ G +
Sbjct: 780 KSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRI 839
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
D+ ++ EM GC P+ +N I + + A L E++ SP TY
Sbjct: 840 DELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPL 899
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
+ + ++ M C PN L+ + V IA L+ M+++G
Sbjct: 900 IGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGI 959
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEALQ 240
+ +L + L G++ +A F E+ G P VS+ I L + +EAL
Sbjct: 960 RPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALS 1019
Query: 241 NLS 243
S
Sbjct: 1020 LFS 1022
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 94/209 (44%), Gaps = 1/209 (0%)
Query: 16 LIDVYCKDRQVEKAYKIVEKM-RDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEY 74
LI V CK ++ A K+ +K + P SY ++ GL + A + EMK
Sbjct: 758 LIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNA 817
Query: 75 GCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSS 134
GC P+ YN + + +KR+ + L +EM+ +G PN T+N+ SN + +
Sbjct: 818 GCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKA 877
Query: 135 WNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDL 194
+LY ++ P + L+ + + E A++++ +M + + ++L +
Sbjct: 878 LDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILING 937
Query: 195 LCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G + A F MI++G +P S+
Sbjct: 938 FGKAGNVNIACDLFKRMIKEGIRPDLKSY 966
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/278 (19%), Positives = 114/278 (41%), Gaps = 39/278 (14%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M M PD+++YN +I K+ + A+ +M+ + +SPD ++ +++ G+ G+
Sbjct: 638 MTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQMK-KFLSPDHVTLYTLLPGVVKDGR 696
Query: 61 PDKARDVL--------------------------KEMKEYGCYPDAAAYNAA-------- 86
+ A ++ E++E + + N+
Sbjct: 697 VEDAIKIVMEFVHQSGLQTSNQVWGELMECILIEAEIEEAISFAEGLVCNSICQDDNLIL 756
Query: 87 --IRNYCIAKRLRDASGLMDEMVEK-GLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMG 143
IR C K+ DA L D+ + G P +YN N ++ L+ M
Sbjct: 757 PLIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKN 816
Query: 144 TGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVE 203
GC PN + L+ + ++++ +L+N+M+ +G I+ +++ L + +
Sbjct: 817 AGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINK 876
Query: 204 AEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQ 240
A + E+I P+ ++ I L++ +EA++
Sbjct: 877 ALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMK 914
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 108/248 (43%), Gaps = 15/248 (6%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E G P+ V++N L+D CK+ V+ A K+ +M + SPDV++Y +II GL G+
Sbjct: 603 MKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGR 662
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEK-GLSPNATTYN 119
A +MK++ PD + R+ DA ++ E V + GL + +
Sbjct: 663 AGYAFWFYHQMKKF-LSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWG 721
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
++ + + ++ + + L+++ +Q+K A +L+ D K
Sbjct: 722 ELMECILIEAEIEEAISFAEGLVCNSICQDDNLILPLIRVLCKQKKALDAKKLF-DKFTK 780
Query: 180 GFGSYILVS--DVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF----------RRIK 227
G++ + L D L A K F+EM G P+ ++ +RI
Sbjct: 781 SLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRID 840
Query: 228 ALMELANK 235
L EL N+
Sbjct: 841 ELFELYNE 848
Score = 43.5 bits (101), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 53/117 (45%), Gaps = 1/117 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
++++ + P +V+YN LI K+ ++ KA + M++ P+ +++ +++ L
Sbjct: 568 LKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDA 627
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
D A + M C PD YN I R A +M +K LSP+ T
Sbjct: 628 VDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQM-KKFLSPDHVT 683
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 44/229 (19%), Positives = 90/229 (39%), Gaps = 37/229 (16%)
Query: 30 YKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRN 89
+K+V ++ + +P+ +Y ++ L + G+ + V M++ + Y +
Sbjct: 109 FKMVSQLPNIVHTPETCNY--MLEFLRVHGRVEDMAFVFDLMQKQVINRNPNTYLTIFKA 166
Query: 90 YCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMG------ 143
I +R A + +M + G NA +YN + + +Y RM+
Sbjct: 167 LSIKGGIRQAPFALGKMRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPS 226
Query: 144 ----------------TGCL-------------PNTQSCMFLVKLCKRQEKVEIALQLWN 174
TG + PN + +++ R +++ A +
Sbjct: 227 MKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILK 286
Query: 175 DMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
M ++G G ++ VL D LC GKL +A++ + +M HKP V++
Sbjct: 287 TMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTY 335
>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
Length = 650
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 116/217 (53%), Gaps = 4/217 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+K ++ +YN LI +C + + +++ M I+P+V++++++I L G+
Sbjct: 291 METKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGK 350
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A+D+ EM G P+ YN+ I C KRL +A+ +MD MV KG P+ TYN+
Sbjct: 351 LTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNI 410
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + + L+ +M G + +T + L++ + K+ +A +++ +MV +G
Sbjct: 411 LINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQG 470
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHK 217
I+ +L D LCD G+L EA L ++++ HK
Sbjct: 471 VHPGIMTYAILLDGLCDNGELEEA----LGILDQMHK 503
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 110/225 (48%), Gaps = 4/225 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +KP +V+Y +ID CKD +++ A +M + I +V +Y S+IG G+
Sbjct: 256 MEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGR 315
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D +L++M P+ ++A I + +L +A L +EM+ +G+ PN TYN
Sbjct: 316 WDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNS 375
Query: 121 FFRVFYWSNDLR--SSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
++ ND R + + M+ GC P+ + L+ + ++V+ ++L+ M
Sbjct: 376 L--IYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSL 433
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+G + + L C KL+ A+K F EM+ +G P +++
Sbjct: 434 RGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTY 478
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 103/223 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G +P+ +Y +++ CK A ++ KM I P V++YT II L G+
Sbjct: 221 MMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGR 280
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A EM+ G + YN+ I ++C R D + L+ +M+ + ++PN T++
Sbjct: 281 LDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSA 340
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
L + +LY M+ G PNT + L+ ++++ A Q+ + MV KG
Sbjct: 341 LIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKG 400
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I ++L + C ++ + + F +M +G V++
Sbjct: 401 CDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTY 443
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 103/222 (46%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G++P+ ++YN LI C D+++++A ++++ M + PD+ +Y +I G Q D
Sbjct: 365 GIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDG 424
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ ++M G D Y+ I+ +C +++L A + EMV +G+ P TY +
Sbjct: 425 MRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDG 484
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ +L + + +M + ++ KV+ A L+ + KG
Sbjct: 485 LCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRD 544
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
I +++ LC L EA+ F +M E G++P ++ +
Sbjct: 545 IQSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTL 586
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 117/248 (47%), Gaps = 4/248 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ D+ + N +I+ +C+ R++ A+ + K+ P+ +++ +++ GL L G+ +A
Sbjct: 120 GIAYDLYTLNIMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEA 179
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+++ M PD N + C+ R+ +A L+ M+ G PN TY
Sbjct: 180 VELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNR 239
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEKGFGS 183
S + S+ +L +M P+ + ++ LCK +++ AL +++M KG +
Sbjct: 240 MCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCK-DGRLDDALSFFSEMETKGIKA 298
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNL 242
+ + L C G+ + + +MI + P+ V+F I +L++ EA ++L
Sbjct: 299 NVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEA-KDL 357
Query: 243 SNKMALFG 250
N+M G
Sbjct: 358 YNEMITRG 365
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 104/219 (47%), Gaps = 6/219 (2%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ D V+Y+ LI +C+ R++ A K+ ++M + + P +++Y ++ GL G+ ++A
Sbjct: 435 GMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEA 494
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+L +M + D YN I C A ++ DA L + KG+ + +YN+
Sbjct: 495 LGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSG 554
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ L + L+ +M G P+ + L++ R + ++QL +M GF S
Sbjct: 555 LCKRSSLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSD 614
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEK--GHKPSQV 221
++ D+L E +KSFL M+ G K S +
Sbjct: 615 ASTVKIVMDMLSSG----ELDKSFLNMLSGPFGDKSSSL 649
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 63/137 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV P I++Y L+D C + ++E+A I+++M + D+ Y II G+ +
Sbjct: 466 MVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANK 525
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A + + G D +YN + C L +A L +M E G P+ TYN
Sbjct: 526 VDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNT 585
Query: 121 FFRVFYWSNDLRSSWNL 137
R ND+ +S L
Sbjct: 586 LIRAHLRGNDITTSVQL 602
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 90/240 (37%), Gaps = 37/240 (15%)
Query: 23 DRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAA 82
D + + A + + M P VI + + G L Q D + K+M+ G D
Sbjct: 68 DIKKDDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYT 127
Query: 83 YNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF-------RVFY--------- 126
N I +C ++L A M ++ + G PN T+N RVF
Sbjct: 128 LNIMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMV 187
Query: 127 -------------------WSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKV 166
+ + + +L RMM GC PN + L ++CK
Sbjct: 188 LSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTA 247
Query: 167 EIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
AL L M + +++ ++ D LC G+L +A F EM KG K + ++ +
Sbjct: 248 S-ALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSL 306
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 58/120 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + ++ DI YN +I C +V+ A+ + + + + D+ SY ++ GL
Sbjct: 501 MHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSS 560
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + ++MKE G PD YN IR + + + L++EM G S +A+T +
Sbjct: 561 LSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSDASTVKI 620
>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 594
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 114/226 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E +KPD+V+++ L+D CK+ V +A + KM + PD+++Y+S+I G+
Sbjct: 305 MLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSL 364
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++ +L EM PD ++ + +C + +A +++ M+E+GL PN TYN
Sbjct: 365 WKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNS 424
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + + ++ M+ GC P+ S L+K + E+++ A QL+++M KG
Sbjct: 425 LMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKG 484
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ L LC G+ A++ F +M G P +++ +
Sbjct: 485 LTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTL 530
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 111/244 (45%), Gaps = 37/244 (15%)
Query: 1 MREMGVKPDIVSYNCLI-----------------------------------DVYCKDRQ 25
M ++ ++PDIV+Y+ LI DV+CK
Sbjct: 340 MIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGM 399
Query: 26 VEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNA 85
V +A I+ M + + P+V++Y S++ G L Q D+AR V M GC PD +YN
Sbjct: 400 VSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNI 459
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
I+ YC ++R+ +A L DEM KGL+PN+ T+ + ++ L+ +M G
Sbjct: 460 LIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHG 519
Query: 146 CLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEA 204
C P+ + L CK E AL L+ + + ++ +L +C GKL +A
Sbjct: 520 CPPDLITYSTLLSGFCKHGHLDE-ALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDA 578
Query: 205 EKSF 208
++ F
Sbjct: 579 KELF 582
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 109/223 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E+ +P++VSY+ +ID CK+R V +A + MR ISP V++Y S+I G+ GQ
Sbjct: 235 MVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQ 294
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + KEM E+ PD ++ + C + +A + +M++ + P+ TY+
Sbjct: 295 WKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSS 354
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
S+ + S L M+ P+ + V + ++ V A + N M+E+G
Sbjct: 355 LIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERG 414
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + L D C ++ EA K F M+ KG P +S+
Sbjct: 415 LRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSY 457
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 130/256 (50%), Gaps = 2/256 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR +G+ P +V+YN LI C Q ++A + ++M + ++ PDV++++ ++ L G
Sbjct: 270 MRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGV 329
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A V +M + PD Y++ I C + +++S L++EM+ + + P+ T+++
Sbjct: 330 VLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSI 389
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ VF + + ++ M+ G PN + L+ +++ A ++++ MV KG
Sbjct: 390 WVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKG 449
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+L ++L C ++ EA++ F EM KG P+ ++ + + + A + A +
Sbjct: 450 CAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAK 509
Query: 241 NLSNKMALFG--PSMI 254
L KM G P +I
Sbjct: 510 ELFKKMGSHGCPPDLI 525
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 115/259 (44%), Gaps = 35/259 (13%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
++G KP I+++N LI+ C + ++ +A + ++ + P V ++T I+ GL +G+
Sbjct: 167 KLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTS 226
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
A +K+M E C P+ +Y+ I + C + + +A L M G+SP TYN
Sbjct: 227 AAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLI 286
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKR----------QEKVEIALQ 171
S + + L+ M+ P+ + LV LCK + ++IA++
Sbjct: 287 YGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAME 346
Query: 172 -----------------LW-------NDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKS 207
LW N+M+ + ++ + D+ C G + EA+
Sbjct: 347 PDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSI 406
Query: 208 FLEMIEKGHKPSQVSFRRI 226
MIE+G +P+ V++ +
Sbjct: 407 INLMIERGLRPNVVTYNSL 425
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 54/115 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ P+ +++ LI C+ + A ++ +KM PD+I+Y++++ G G
Sbjct: 480 MSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGH 539
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNA 115
D+A + + +K+ P+ + C A +L DA L + + L P+
Sbjct: 540 LDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSLSIEELQPDV 594
>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 794
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 110/226 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ P++V+Y+ +I CK + ++KA +++ M + P+ +Y SI+ G GQ
Sbjct: 225 MLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQ 284
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
P +A LK+M G PD YN+ + C R +A + D M ++GL P TTY
Sbjct: 285 PKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGT 344
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + L L M+ G PN L+ +Q KV+ A+ +++ M ++G
Sbjct: 345 LLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQG 404
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + +LC G++ +A + F +MI++ P + + +
Sbjct: 405 LNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSL 450
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 110/217 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G+ PD V+Y +I + CK +VE A + E+M DE +SP I Y S+I L + +
Sbjct: 400 MRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDK 459
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA++++ EM + G D +N+ I ++C R+ ++ L D MV G+ P+ TY+
Sbjct: 460 WDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYST 519
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + + L M+ G P+ + L+ + ++E AL L+ +M G
Sbjct: 520 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSG 579
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHK 217
I+ +++ L + A++ ++ + E G +
Sbjct: 580 VSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQ 616
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 105/226 (46%), Gaps = 4/226 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDE--DISPDVISYTSIIGGLGLV 58
M ++G P++ SYN L+ C + + ++A ++++ M D+ D PDV+SYT++I G
Sbjct: 153 MTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKE 212
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
G DKA EM + G P+ Y++ I C A+ + A ++ MV+ G+ PN TY
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMV 177
N + S + + +M G P+ + L+ LCK E A ++++ M
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTE-ARKMFDSMT 331
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++G I L G LVE M+ G P+ F
Sbjct: 332 KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVF 377
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 111/226 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV P+ +YN ++ YC Q ++A ++KM + + PDV++Y S++ L G+
Sbjct: 260 MVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGR 319
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR + M + G P+ Y ++ Y L + GL+D MV G+ PN +++
Sbjct: 320 CTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSI 379
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + ++ +M G P+T + ++ + + +VE A++ + M+++
Sbjct: 380 LICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDER 439
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+V + L LC K +A++ LEM+++G + F I
Sbjct: 440 LSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSI 485
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 108/257 (42%), Gaps = 40/257 (15%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
V P++ +Y LI C +++ + + + + D I++T ++ GL + A
Sbjct: 87 VTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAM 146
Query: 66 D-VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKG--LSPNATTYNLFF 122
D VL+ M + GC P+ +YN ++ C R ++A L+ M + G P+ +Y
Sbjct: 147 DIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVI 206
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKG- 180
F+ DL ++ Y M+ G LPN + + LCK Q ++ A+++ MV+ G
Sbjct: 207 NGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQ-AMDKAMEVLTSMVKNGV 265
Query: 181 ------FGSY----------------------------ILVSDVLFDLLCDMGKLVEAEK 206
+ S ++ + L D LC G+ EA K
Sbjct: 266 MPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARK 325
Query: 207 SFLEMIEKGHKPSQVSF 223
F M ++G KP ++
Sbjct: 326 MFDSMTKRGLKPEITTY 342
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 103/226 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ P+ ++ LI Y K +V++A + KMR + ++PD ++Y ++IG L G+
Sbjct: 365 MVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGR 424
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A ++M + P YN+ I + CI + A L+ EM+++G+ + +N
Sbjct: 425 VEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNS 484
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ S L+ M+ G P+ + L+ K++ A +L MV G
Sbjct: 485 IIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVG 544
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + L + C + ++ +A F EM G P +++ I
Sbjct: 545 MKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNII 590
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 73/151 (48%), Gaps = 4/151 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +GVKPDI++Y+ LID YC ++++A K++ M + PD ++Y ++I G + +
Sbjct: 505 MVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISR 564
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A + +EM+ G PD YN ++ +R A L + E G +TYN+
Sbjct: 565 MEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNI 624
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQ 151
+N + RM CL + Q
Sbjct: 625 ILHGLCKNNLTDEAL----RMFQNLCLTDLQ 651
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 59/131 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+ E G + ++ +YN ++ CK+ ++A ++ + + D+ + ++ +IG L VG+
Sbjct: 610 ITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGR 669
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A+D+ + G PD Y+ N L + L M E G + N+ N
Sbjct: 670 NDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNS 729
Query: 121 FFRVFYWSNDL 131
R D+
Sbjct: 730 IVRKLLQRGDI 740
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 89/219 (40%), Gaps = 12/219 (5%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV PDI++YN ++ + R+ A ++ + + ++ +Y I+ GL
Sbjct: 575 MESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNL 634
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + + + + +N I R +A L + GL P+ TY+L
Sbjct: 635 TDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSL 694
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMV-E 178
L +L+ M GC N++ +V KL +R + L+ M+ E
Sbjct: 695 MAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLF--MIDE 752
Query: 179 KGFGSYILVSDVLFDLLCDMGK-------LVEAEKSFLE 210
K F + + DLL GK L E KSF+E
Sbjct: 753 KHFSLEASTASLFLDLLSG-GKYQEYHRFLPEKYKSFIE 790
>gi|449503889|ref|XP_004162218.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g16890, mitochondrial-like [Cucumis sativus]
Length = 697
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 109/214 (50%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ +I SYN +ID CK + +++A ++ + + ISP++++Y ++IGG G DKA
Sbjct: 469 GLISNIYSYNMVIDCLCKGKSMDRASEMFRDLHNRGISPNIVTYNTLIGGFCRNGNMDKA 528
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+++L+ + E PD +N+ I C A + +A G EMVE + PN TYN+
Sbjct: 529 QELLEMLLESRFRPDIFTFNSLIDGLCQAHKHENAFGCFTEMVEWDVPPNVITYNILICS 588
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
F D+ S +L +M G P+T S L++ + + + A +L++ M+ G
Sbjct: 589 FCAIGDVSRSTHLLRQMKLHGIQPDTFSFNALIQGYTGKNRFQKAEKLFDSMLRLGIQPD 648
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
L LC G+ +A + FL M E G P
Sbjct: 649 NYTYGALIKSLCKSGRHDKAREIFLSMKENGCTP 682
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 77/151 (50%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E +PDI ++N LID C+ + E A+ +M + D+ P+VI+Y +I +G
Sbjct: 537 ESRFRPDIFTFNSLIDGLCQAHKHENAFGCFTEMVEWDVPPNVITYNILICSFCAIGDVS 596
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
++ +L++MK +G PD ++NA I+ Y R + A L D M+ G+ P+ TY
Sbjct: 597 RSTHLLRQMKLHGIQPDTFSFNALIQGYTGKNRFQKAEKLFDSMLRLGIQPDNYTYGALI 656
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSC 153
+ S + ++ M GC P++ +C
Sbjct: 657 KSLCKSGRHDKAREIFLSMKENGCTPDSYTC 687
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 94/183 (51%), Gaps = 6/183 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+ G+ P+IV+YN LI +C++ ++KA +++E + + PD+ ++ S+I GL +
Sbjct: 500 LHNRGISPNIVTYNTLIGGFCRNGNMDKAQELLEMLLESRFRPDIFTFNSLIDGLCQAHK 559
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A EM E+ P+ YN I ++C + ++ L+ +M G+ P+ ++N
Sbjct: 560 HENAFGCFTEMVEWDVPPNVITYNILICSFCAIGDVSRSTHLLRQMKLHGIQPDTFSFNA 619
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCK--RQEKVEIALQLWNDMV 177
+ + N + + L+ M+ G P+ + L+K LCK R +K A +++ M
Sbjct: 620 LIQGYTGKNRFQKAEKLFDSMLRLGIQPDNYTYGALIKSLCKSGRHDK---AREIFLSMK 676
Query: 178 EKG 180
E G
Sbjct: 677 ENG 679
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/228 (20%), Positives = 111/228 (48%), Gaps = 4/228 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G P++ +Y LID + ++ +A+K+++ M++ ++ P+ + S++ G+
Sbjct: 290 MEGLGYFPNVFTYTILIDGFFNAKRAGEAFKVLQTMKERNVVPNEATMRSLVHGVFRCIA 349
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKR--LRDASGLMDEMVEKGLSPNATTY 118
PDKA ++L E E + + YC++ +A + + ++G P+++T+
Sbjct: 350 PDKAFELLLEFVERKQGITQLVCDNIL--YCLSNNSMASEAVMFLIKTGKEGYVPSSSTF 407
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
N+ DL+ + ++ + +G P + + L++ + K+EI + + ++
Sbjct: 408 NITLACVLKKLDLKVTCTVFDNCVQSGVKPGFSTYLTLIEALYKAGKMEIGNRYMDRLIN 467
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G S I +++ D LC + A + F ++ +G P+ V++ +
Sbjct: 468 DGLISNIYSYNMVIDCLCKGKSMDRASEMFRDLHNRGISPNIVTYNTL 515
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 60/121 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E V P++++YN LI +C V ++ ++ +M+ I PD S+ ++I G +
Sbjct: 570 MVEWDVPPNVITYNILICSFCAIGDVSRSTHLLRQMKLHGIQPDTFSFNALIQGYTGKNR 629
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA + M G PD Y A I++ C + R A + M E G +P++ T +L
Sbjct: 630 FQKAEKLFDSMLRLGIQPDNYTYGALIKSLCKSGRHDKAREIFLSMKENGCTPDSYTCSL 689
Query: 121 F 121
F
Sbjct: 690 F 690
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 63/123 (51%), Gaps = 1/123 (0%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
+G+ P YN ++D K ++ AY ++M + PD +Y +I G+ +G D+
Sbjct: 223 LGLNPTTRLYNAVMDALIKSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDE 282
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPN-ATTYNLFF 122
A ++K+M+ G +P+ Y I + AKR +A ++ M E+ + PN AT +L
Sbjct: 283 ALRLMKQMEGLGYFPNVFTYTILIDGFFNAKRAGEAFKVLQTMKERNVVPNEATMRSLVH 342
Query: 123 RVF 125
VF
Sbjct: 343 GVF 345
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/246 (18%), Positives = 96/246 (39%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G P ++N + K ++ + + + P +Y ++I L G+ +
Sbjct: 399 GYVPSSSTFNITLACVLKKLDLKVTCTVFDNCVQSGVKPGFSTYLTLIEALYKAGKMEIG 458
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ + G + +YN I C K + AS + ++ +G+SPN TYN
Sbjct: 459 NRYMDRLINDGLISNIYSYNMVIDCLCKGKSMDRASEMFRDLHNRGISPNIVTYNTLIGG 518
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
F + ++ + L ++ + P+ + L+ + K E A + +MVE
Sbjct: 519 FCRNGNMDKAQELLEMLLESRFRPDIFTFNSLIDGLCQAHKHENAFGCFTEMVEWDVPPN 578
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSN 244
++ ++L C +G + + +M G +P SF + N+ + + L +
Sbjct: 579 VITYNILICSFCAIGDVSRSTHLLRQMKLHGIQPDTFSFNALIQGYTGKNRFQKAEKLFD 638
Query: 245 KMALFG 250
M G
Sbjct: 639 SMLRLG 644
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 75/183 (40%)
Query: 41 ISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDAS 100
++P Y +++ L D A ++M + C PD YN I C + +A
Sbjct: 225 LNPTTRLYNAVMDALIKSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDEAL 284
Query: 101 GLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLC 160
LM +M G PN TY + F+ + ++ + M +PN + LV
Sbjct: 285 RLMKQMEGLGYFPNVFTYTILIDGFFNAKRAGEAFKVLQTMKERNVVPNEATMRSLVHGV 344
Query: 161 KRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQ 220
R + A +L + VE+ G LV D + L + EA ++ ++G+ PS
Sbjct: 345 FRCIAPDKAFELLLEFVERKQGITQLVCDNILYCLSNNSMASEAVMFLIKTGKEGYVPSS 404
Query: 221 VSF 223
+F
Sbjct: 405 STF 407
Score = 40.8 bits (94), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 69/169 (40%), Gaps = 16/169 (9%)
Query: 66 DVLKEMKEYG--------CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
D+L+++KE G C + + NYC+ + GL+ GL+P
Sbjct: 180 DLLQQIKESGLKVTEELLCILFGSWGRLGLANYCV--EVFGQIGLL------GLNPTTRL 231
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
YN SN L ++ + +M C+P+ + L+ R V+ AL+L M
Sbjct: 232 YNAVMDALIKSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDEALRLMKQME 291
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G+ + +L D + + EA K M E+ P++ + R +
Sbjct: 292 GLGYFPNVFTYTILIDGFFNAKRAGEAFKVLQTMKERNVVPNEATMRSL 340
>gi|449433429|ref|XP_004134500.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g16890, mitochondrial-like
[Cucumis sativus]
Length = 688
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 109/214 (50%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ +I SYN +ID CK + +++A ++ + + ISP++++Y ++IGG G DKA
Sbjct: 460 GLISNIYSYNMVIDCLCKGKSMDRASEMFRDLHNRGISPNIVTYNTLIGGFCRNGNMDKA 519
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+++L+ + E PD +N+ I C A + +A G EMVE + PN TYN+
Sbjct: 520 QELLEMLLESRFRPDIFTFNSLIDGLCQAHKHENAFGCFTEMVEWDVPPNVITYNILICS 579
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
F D+ S +L +M G P+T S L++ + + + A +L++ M+ G
Sbjct: 580 FCAIGDVSRSTHLLRQMKLHGIQPDTFSFNALIQGYTGKNRFQKAEKLFDSMLRLGIQPD 639
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
L LC G+ +A + FL M E G P
Sbjct: 640 NYTYGALIKSLCKSGRHDKAREIFLSMKENGCTP 673
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 77/151 (50%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E +PDI ++N LID C+ + E A+ +M + D+ P+VI+Y +I +G
Sbjct: 528 ESRFRPDIFTFNSLIDGLCQAHKHENAFGCFTEMVEWDVPPNVITYNILICSFCAIGDVS 587
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
++ +L++MK +G PD ++NA I+ Y R + A L D M+ G+ P+ TY
Sbjct: 588 RSTHLLRQMKLHGIQPDTFSFNALIQGYTGKNRFQKAEKLFDSMLRLGIQPDNYTYGALI 647
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSC 153
+ S + ++ M GC P++ +C
Sbjct: 648 KSLCKSGRHDKAREIFLSMKENGCTPDSYTC 678
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 94/183 (51%), Gaps = 6/183 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+ G+ P+IV+YN LI +C++ ++KA +++E + + PD+ ++ S+I GL +
Sbjct: 491 LHNRGISPNIVTYNTLIGGFCRNGNMDKAQELLEMLLESRFRPDIFTFNSLIDGLCQAHK 550
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A EM E+ P+ YN I ++C + ++ L+ +M G+ P+ ++N
Sbjct: 551 HENAFGCFTEMVEWDVPPNVITYNILICSFCAIGDVSRSTHLLRQMKLHGIQPDTFSFNA 610
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCK--RQEKVEIALQLWNDMV 177
+ + N + + L+ M+ G P+ + L+K LCK R +K A +++ M
Sbjct: 611 LIQGYTGKNRFQKAEKLFDSMLRLGIQPDNYTYGALIKSLCKSGRHDK---AREIFLSMK 667
Query: 178 EKG 180
E G
Sbjct: 668 ENG 670
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 60/121 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E V P++++YN LI +C V ++ ++ +M+ I PD S+ ++I G +
Sbjct: 561 MVEWDVPPNVITYNILICSFCAIGDVSRSTHLLRQMKLHGIQPDTFSFNALIQGYTGKNR 620
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA + M G PD Y A I++ C + R A + M E G +P++ T +L
Sbjct: 621 FQKAEKLFDSMLRLGIQPDNYTYGALIKSLCKSGRHDKAREIFLSMKENGCTPDSYTCSL 680
Query: 121 F 121
F
Sbjct: 681 F 681
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/226 (19%), Positives = 106/226 (46%), Gaps = 9/226 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G P++ +Y LID + ++ + +K+++ M++ ++ P+ + S++ G+
Sbjct: 290 MEGLGYFPNVFTYTILIDGFFNAKRAGETFKVLQTMKERNVVPNEATMRSLVHGVFRCIA 349
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
PDKA ++L E E + + YC++ + +M P+++T+N+
Sbjct: 350 PDKAFELLLEFVERKQGITQLVCDNIL--YCLSNNSMASEAVM-------FXPSSSTFNI 400
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
DL+ + ++ + +G P + + L++ + K+EI + + ++ G
Sbjct: 401 TLACVLKKLDLKVTCTVFDNCVQSGVKPGFSTYLTLIEALYKAGKMEIGNRYMDRLINDG 460
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
S I +++ D LC + A + F ++ +G P+ V++ +
Sbjct: 461 LISNIYSYNMVIDCLCKGKSMDRASEMFRDLHNRGISPNIVTYNTL 506
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 62/123 (50%), Gaps = 1/123 (0%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
+G+ P YN ++D K ++ AY ++M + PD +Y +I G+ +G D+
Sbjct: 223 LGLNPTTRLYNAVMDALIKSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDE 282
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPN-ATTYNLFF 122
A ++K+M+ G +P+ Y I + AKR + ++ M E+ + PN AT +L
Sbjct: 283 ALRLMKQMEGLGYFPNVFTYTILIDGFFNAKRAGETFKVLQTMKERNVVPNEATMRSLVH 342
Query: 123 RVF 125
VF
Sbjct: 343 GVF 345
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/243 (18%), Positives = 95/243 (39%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P ++N + K ++ + + + P +Y ++I L G+ +
Sbjct: 393 PSSSTFNITLACVLKKLDLKVTCTVFDNCVQSGVKPGFSTYLTLIEALYKAGKMEIGNRY 452
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
+ + G + +YN I C K + AS + ++ +G+SPN TYN F
Sbjct: 453 MDRLINDGLISNIYSYNMVIDCLCKGKSMDRASEMFRDLHNRGISPNIVTYNTLIGGFCR 512
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ ++ + L ++ + P+ + L+ + K E A + +MVE ++
Sbjct: 513 NGNMDKAQELLEMLLESRFRPDIFTFNSLIDGLCQAHKHENAFGCFTEMVEWDVPPNVIT 572
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMA 247
++L C +G + + +M G +P SF + N+ + + L + M
Sbjct: 573 YNILICSFCAIGDVSRSTHLLRQMKLHGIQPDTFSFNALIQGYTGKNRFQKAEKLFDSML 632
Query: 248 LFG 250
G
Sbjct: 633 RLG 635
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 60/149 (40%)
Query: 41 ISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDAS 100
++P Y +++ L D A ++M + C PD YN I C + +A
Sbjct: 225 LNPTTRLYNAVMDALIKSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDEAL 284
Query: 101 GLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLC 160
LM +M G PN TY + F+ + ++ + M +PN + LV
Sbjct: 285 RLMKQMEGLGYFPNVFTYTILIDGFFNAKRAGETFKVLQTMKERNVVPNEATMRSLVHGV 344
Query: 161 KRQEKVEIALQLWNDMVEKGFGSYILVSD 189
R + A +L + VE+ G LV D
Sbjct: 345 FRCIAPDKAFELLLEFVERKQGITQLVCD 373
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 68/169 (40%), Gaps = 16/169 (9%)
Query: 66 DVLKEMKEYG--------CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
D+L+++KE G C + + NYC+ + GL+ GL+P
Sbjct: 180 DLLQQIKESGLKVTEELLCILFGSWGRLGLANYCV--EVFGQIGLL------GLNPTTRL 231
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
YN SN L ++ + +M C+P+ + L+ R V+ AL+L M
Sbjct: 232 YNAVMDALIKSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDEALRLMKQME 291
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G+ + +L D + + E K M E+ P++ + R +
Sbjct: 292 GLGYFPNVFTYTILIDGFFNAKRAGETFKVLQTMKERNVVPNEATMRSL 340
>gi|302758668|ref|XP_002962757.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
gi|300169618|gb|EFJ36220.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
Length = 439
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 105/199 (52%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
R+ +P++V++N LI CK ++E A+++V++M+ D+ D +YT+++ GL G+
Sbjct: 239 RDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRT 298
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
+ V +EM GC P Y + +C A L+DA ++ MV KG+ P+ TTY +
Sbjct: 299 SEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVL 358
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
+ + +R++ + +++ C P LV+ C + V+ A++ + +M+++
Sbjct: 359 LEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRL 418
Query: 182 GSYILVSDVLFDLLCDMGK 200
+L ++LC G+
Sbjct: 419 APDPATCKLLVEMLCKRGR 437
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 124/252 (49%), Gaps = 10/252 (3%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
+ + P+ +Y +I YCK ++++A +++E+ S DVI+ TS+ G +
Sbjct: 98 KNFALVPEATTYTAIIKCYCKMDRLDQARQLLEE--SSCCSSDVIAITSVARGFCKAQRV 155
Query: 62 DKARDVLKEMKEY-GCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A +L +M E PD A+N I +C A R+R+A +++ +V G PNA TY
Sbjct: 156 DEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTT 215
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGT---GCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDM 176
F S +L + L+ +++ + PN + L+ LCK +++E A +L M
Sbjct: 216 LIDGFCKSGNLSEALQLF-KVLSSRDHHAEPNVVTFNALISGLCK-ADRLEHAFELVKQM 273
Query: 177 VEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANK 235
+ + L D LC G+ E + F EM+ +G PS V++ + A + +
Sbjct: 274 KARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSL 333
Query: 236 QEALQNLSNKMA 247
Q+A Q + + +A
Sbjct: 334 QDAQQVIRSMVA 345
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 102/219 (46%), Gaps = 2/219 (0%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
KPDIV++N +I +CK +V +AY+++E + P+ ++YT++I G G +A
Sbjct: 172 KPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQ 231
Query: 67 VLKEM--KEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ K + +++ P+ +NA I C A RL A L+ +M + L + TY
Sbjct: 232 LFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDG 291
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
++ M+ GC P+ + LV + ++ A Q+ MV KG
Sbjct: 292 LCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPD 351
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ VL + L + GK+ A + F +++ + P V +
Sbjct: 352 VTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVY 390
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 64/121 (52%), Gaps = 1/121 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+RE G P +V+Y L+ +CK ++ A +++ M + I PDV +YT ++ GL G+
Sbjct: 309 LRE-GCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGK 367
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A + +++ C P A Y+A +R C A + +A EM+++ L+P+ T L
Sbjct: 368 VRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKL 427
Query: 121 F 121
Sbjct: 428 L 428
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 74/163 (45%), Gaps = 1/163 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ ++ D +Y L+D CK + + ++ E+M E +P V++YT+++ G
Sbjct: 273 MKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGS 332
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A+ V++ M G PD Y + ++R A+ ++++ + P A Y+
Sbjct: 333 LQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSA 392
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKR 162
R + + + Y M+ P+ +C LV+ LCKR
Sbjct: 393 LVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKR 435
>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 110/226 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ P++V+Y+ +I CK + ++KA +++ M + P+ +Y SI+ G GQ
Sbjct: 225 MLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQ 284
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
P +A LK+M G PD YN+ + C R +A + D M ++GL P TTY
Sbjct: 285 PKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGT 344
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + L L M+ G PN L+ +Q KV+ A+ +++ M ++G
Sbjct: 345 LLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQG 404
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + +LC G++ +A + F +MI++ P + + +
Sbjct: 405 LNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSL 450
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 110/217 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G+ PD V+Y +I + CK +VE A + E+M DE +SP I Y S+I L + +
Sbjct: 400 MRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDK 459
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA++++ EM + G D +N+ I ++C R+ ++ L D MV G+ P+ TY+
Sbjct: 460 WDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYST 519
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + + L M+ G P+ + L+ + ++E AL L+ +M G
Sbjct: 520 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSG 579
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHK 217
I+ +++ L + A++ ++ + E G +
Sbjct: 580 VSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQ 616
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 105/226 (46%), Gaps = 4/226 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDE--DISPDVISYTSIIGGLGLV 58
M ++G P++ SYN L+ C D + ++A ++++ M D+ D PDV+SYT++I G
Sbjct: 153 MTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKE 212
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
G DKA EM + G P+ Y++ I C A+ + A ++ MV+ G+ PN TY
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMV 177
N + S + + +M G P+ + L+ LCK E A ++++ M
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTE-ARKMFDSMT 331
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++G I L G LVE M+ G P+ F
Sbjct: 332 KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVF 377
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 111/226 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV P+ +YN ++ YC Q ++A ++KM + + PDV++Y S++ L G+
Sbjct: 260 MVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGR 319
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR + M + G P+ Y ++ Y L + GL+D MV G+ PN +++
Sbjct: 320 CTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSI 379
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + ++ +M G P+T + ++ + + +VE A++ + M+++
Sbjct: 380 LICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDER 439
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+V + L LC K +A++ LEM+++G + F I
Sbjct: 440 LSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSI 485
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 103/226 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ P+ ++ LI Y K +V++A + KMR + ++PD ++Y ++IG L G+
Sbjct: 365 MVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGR 424
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A ++M + P YN+ I + CI + A L+ EM+++G+ + +N
Sbjct: 425 VEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNS 484
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ S L+ M+ G P+ + L+ K++ A +L MV G
Sbjct: 485 IIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVG 544
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + L + C + ++ +A F EM G P +++ I
Sbjct: 545 MKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNII 590
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 108/257 (42%), Gaps = 40/257 (15%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
V P++ +Y L+ C +++ + + + + D I++T ++ GL + A
Sbjct: 87 VTPNLCTYGILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAM 146
Query: 66 D-VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKG--LSPNATTYNLFF 122
D VL+ M + GC P+ +YN ++ C R ++A L+ M + G P+ +Y
Sbjct: 147 DIVLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVI 206
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKG- 180
F+ DL ++ Y M+ G LPN + + LCK Q ++ A+++ MV+ G
Sbjct: 207 NGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQ-AMDKAMEVLTSMVKNGV 265
Query: 181 ------FGSY----------------------------ILVSDVLFDLLCDMGKLVEAEK 206
+ S ++ + L D LC G+ EA K
Sbjct: 266 MPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARK 325
Query: 207 SFLEMIEKGHKPSQVSF 223
F M ++G KP ++
Sbjct: 326 MFDSMTKRGLKPEITTY 342
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 73/151 (48%), Gaps = 4/151 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +GVKPDI++Y+ LID YC ++++A K++ M + PD ++Y ++I G + +
Sbjct: 505 MVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISR 564
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A + +EM+ G PD YN ++ +R A L + E G +TYN+
Sbjct: 565 MEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNI 624
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQ 151
+N + RM CL + Q
Sbjct: 625 ILHGLCKNNLTDEAL----RMFQNLCLTDLQ 651
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 59/131 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+ E G + ++ +YN ++ CK+ ++A ++ + + D+ + ++ +IG L VG+
Sbjct: 610 ITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGR 669
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A+D+ + G PD Y+ N L + L M E G + N+ N
Sbjct: 670 NDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNS 729
Query: 121 FFRVFYWSNDL 131
R D+
Sbjct: 730 IVRKLLQRGDI 740
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 89/219 (40%), Gaps = 12/219 (5%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV PDI++YN ++ + R+ A ++ + + ++ +Y I+ GL
Sbjct: 575 MESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNL 634
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + + + + +N I R +A L + GL P+ TY+L
Sbjct: 635 TDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSL 694
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMV-E 178
L +L+ M GC N++ +V KL +R + L+ M+ E
Sbjct: 695 MAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLF--MIDE 752
Query: 179 KGFGSYILVSDVLFDLLCDMGK-------LVEAEKSFLE 210
K F + + DLL GK L E KSF+E
Sbjct: 753 KHFSLEASTASLFLDLLSG-GKYQEYHRFLPEKYKSFIE 790
>gi|302758228|ref|XP_002962537.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
gi|300169398|gb|EFJ36000.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
Length = 439
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 105/199 (52%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
R+ +P++V++N LI CK ++E A+++V++M+ D+ D +YT+++ GL G+
Sbjct: 239 RDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRT 298
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
+ V +EM GC P Y + +C A L+DA ++ MV KG+ P+ TTY +
Sbjct: 299 SEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVL 358
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
+ + +R++ + +++ C P LV+ C + V+ A++ + +M+++
Sbjct: 359 LEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRL 418
Query: 182 GSYILVSDVLFDLLCDMGK 200
+L ++LC G+
Sbjct: 419 APDPATCKLLVEMLCKRGR 437
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 124/252 (49%), Gaps = 10/252 (3%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
+ + P+ +Y +I YCK ++++A +++E+ S DVI+ TS+ G +
Sbjct: 98 KNFALVPEATTYTAIIKCYCKMDRLDQARQLLEE--SSCCSSDVIAITSVARGFCKAQRV 155
Query: 62 DKARDVLKEMKEY-GCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A +L +M E PD A+N I +C A R+R+A +++ +V G PNA TY
Sbjct: 156 DEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTT 215
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGT---GCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDM 176
F S +L + L+ +++ + PN + L+ LCK +++E A +L M
Sbjct: 216 LIDGFCKSGNLSEALQLF-KVLSSRDHHAEPNVVTFNALISGLCK-ADRLEHAFELVKQM 273
Query: 177 VEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANK 235
+ + L D LC G+ E + F EM+ +G PS V++ + A + +
Sbjct: 274 KARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSL 333
Query: 236 QEALQNLSNKMA 247
Q+A Q + + +A
Sbjct: 334 QDAQQVIRSMVA 345
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 102/219 (46%), Gaps = 2/219 (0%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
KPDIV++N +I +CK +V +AY+++E + P+ ++YT++I G G +A
Sbjct: 172 KPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQ 231
Query: 67 VLKEM--KEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ K + +++ P+ +NA I C A RL A L+ +M + L + TY
Sbjct: 232 LFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDG 291
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
++ M+ GC P+ + LV + ++ A Q+ MV KG
Sbjct: 292 LCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPD 351
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ VL + L + GK+ A + F +++ + P V +
Sbjct: 352 VTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVY 390
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 64/121 (52%), Gaps = 1/121 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+RE G P +V+Y L+ +CK ++ A +++ M + I PDV +YT ++ GL G+
Sbjct: 309 LRE-GCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGK 367
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A + +++ C P A Y+A +R C A + +A EM+++ L+P+ T L
Sbjct: 368 VRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKL 427
Query: 121 F 121
Sbjct: 428 L 428
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 74/163 (45%), Gaps = 1/163 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ ++ D +Y L+D CK + + ++ E+M E +P V++YT+++ G
Sbjct: 273 MKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGS 332
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A+ V++ M G PD Y + ++R A+ ++++ + P A Y+
Sbjct: 333 LQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSA 392
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKR 162
R + + + Y M+ P+ +C LV+ LCKR
Sbjct: 393 LVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKR 435
>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 120/239 (50%), Gaps = 1/239 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E + PD+ +++ LID + K+ ++ +A K+ ++M I P +++Y+S+I G + +
Sbjct: 317 MIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDR 376
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A+ + + M C+PD +Y+ I+ +C AKR+ + L EM ++GL N TY
Sbjct: 377 LDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTT 436
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + D + ++ M+ G PN + L+ + K+E A+ ++ +
Sbjct: 437 LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 496
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEA 238
I +++ + +C GK+ + F + KG KP V++ I +K+EA
Sbjct: 497 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEA 555
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 114/226 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + ++P ++ Y +ID CK++ ++ A + ++M + I P+V++Y+S+I L G+
Sbjct: 247 MEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGR 306
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +L +M E PD ++A I + +L +A L DEMV++ + P+ TY+
Sbjct: 307 WSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSS 366
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + L + ++ M+ C P+ S L+K + ++V+ ++L+ +M ++G
Sbjct: 367 LINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRG 426
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ L L G A++ F EM+ G P+ +++ +
Sbjct: 427 LVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTL 472
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 107/222 (48%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G +PD+V+Y +++ CK + A+ ++ KM + P V+ YT+II GL D A
Sbjct: 216 GCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDA 275
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++ KEM+ G P+ Y++ I C R DAS L+ +M+E+ ++P+ T++
Sbjct: 276 LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDA 335
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
F L + LY M+ P+ + L+ ++++ A Q++ MV K
Sbjct: 336 FVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 395
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ L C ++ E + F EM ++G + V++ +
Sbjct: 396 VVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTL 437
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 103/220 (46%), Gaps = 2/220 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P I+ ++ L+ K + + + E+M++ + + +Y+ +I Q A V
Sbjct: 79 PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSILINCFCRRSQLPLALAV 138
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L +M + G P+ ++ + YC +KR+ +A L+D+M G PN T+N +
Sbjct: 139 LGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFL 198
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYIL 186
N + L RM+ GC P+ + +V LCKR + ++A L N M + +L
Sbjct: 199 HNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGD-TDLAFILLNKMEQGKLEPGVL 257
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + D LC + +A F EM KG +P+ V++ +
Sbjct: 258 IYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSL 297
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 86/174 (49%), Gaps = 2/174 (1%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD+VSY+ LI +CK ++V++ ++ +M + + ++YT++I GL G D A+++
Sbjct: 394 PDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEI 453
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
KEM G P+ YN + C +L A + + + + P TYN+
Sbjct: 454 FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 513
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKG 180
+ + W+L+C + G P+ + ++ C++ K E A L+ +M E G
Sbjct: 514 AGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEE-ADALFKEMKEDG 566
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 103/226 (45%), Gaps = 8/226 (3%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G +P+ V++N LI + +A ++++M + PD+++Y ++ GL G D A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+L +M++ P Y I C K + DA L EM KG+ PN TY+
Sbjct: 241 FILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 125 F----YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
WS+ R L M+ P+ + L+ ++ K+ A +L+++MV++
Sbjct: 301 LCNYGRWSDASR----LLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRS 356
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
I+ L + C +L EA++ F M+ K P VS+ +
Sbjct: 357 IDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTL 402
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 67/141 (47%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV P+I++YN L+D CK+ ++EKA + E ++ + P + +Y +I G+ G+ +
Sbjct: 461 GVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDG 520
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
D+ + G PD AYN I +C +A L EM E G PN+ YN R
Sbjct: 521 WDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRA 580
Query: 125 FYWSNDLRSSWNLYCRMMGTG 145
D +S L M G
Sbjct: 581 RLRDGDREASAELIKEMRSCG 601
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 108/261 (41%), Gaps = 35/261 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ +G+ + +Y+ LI+ +C+ Q+ A ++ KM P++++ +S++ G +
Sbjct: 107 MQNLGMPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKR 166
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++ +M G P+ +N I + + +A L+D MV KG P+ TY +
Sbjct: 167 ISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGV 226
Query: 121 FFR----------VFYWSNDLRS-------------------------SWNLYCRMMGTG 145
F N + + NL+ M G
Sbjct: 227 VVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKG 286
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
PN + L+ + A +L +DM+E+ + L D GKLVEAE
Sbjct: 287 IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAE 346
Query: 206 KSFLEMIEKGHKPSQVSFRRI 226
K + EM+++ PS V++ +
Sbjct: 347 KLYDEMVKRSIDPSIVTYSSL 367
>gi|414884149|tpg|DAA60163.1| TPA: hypothetical protein ZEAMMB73_830458 [Zea mays]
Length = 378
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 115/235 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G D +YN ++D +CK +V+KAY+ +E+M+ + + P V +Y SII GL + +
Sbjct: 85 MKQRGFALDARAYNAVVDGFCKSGKVDKAYEALEEMKVKHVPPTVATYGSIIDGLAKIDR 144
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + +E K G + Y++ I + R+ +A +++EM++KGL+PN T+N
Sbjct: 145 LDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLAPNVYTWNS 204
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ + + M C PNT + L+ R +K A W +M ++G
Sbjct: 205 LMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQG 264
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANK 235
++ + L +G + +A F G P SF + M AN+
Sbjct: 265 LVPNVVTYTTMISGLAKVGNITDACSLFERFKANGGIPDAASFNALIEGMSHANR 319
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 95/223 (42%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G +PD+ N +D K VEK I E ++ PDV SY+ +I GL GQ
Sbjct: 15 MNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQ 74
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ + MK+ G DA AYNA + +C + ++ A ++EM K + P TY
Sbjct: 75 ARETSSIFHAMKQRGFALDARAYNAVVDGFCKSGKVDKAYEALEEMKVKHVPPTVATYGS 134
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L ++ L+ G N L+ + +++ A + +M++KG
Sbjct: 135 IIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKG 194
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + L D L ++ EA F M E P+ ++
Sbjct: 195 LAPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTY 237
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 80/169 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ P++ ++N L+D K ++ +A + M++ SP+ +Y+ +I GL V +
Sbjct: 190 MMKKGLAPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQK 249
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA +EM++ G P+ Y I + DA L + G P+A ++N
Sbjct: 250 YNKAFVFWQEMQKQGLVPNVVTYTTMISGLAKVGNITDACSLFERFKANGGIPDAASFNA 309
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIA 169
+N +++++ GC N ++C+ L+ + E +E A
Sbjct: 310 LIEGMSHANRAIEAYHVFEETRLRGCRINVKACISLLDALNKAECIEQA 358
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 95/214 (44%), Gaps = 1/214 (0%)
Query: 27 EKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAA 86
E +KI ++M PD+ + + + G +K R + +++K YG PD +Y+
Sbjct: 6 EDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSIL 65
Query: 87 IRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGC 146
I A + R+ S + M ++G + +A YN F S + ++ M
Sbjct: 66 IHGLTKAGQARETSSIFHAMKQRGFALDARAYNAVVDGFCKSGKVDKAYEALEEMKVKHV 125
Query: 147 LPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEK 206
P + ++ + ++++ A L+ + KG ++V L D +G++ EA
Sbjct: 126 PPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYL 185
Query: 207 SFLEMIEKGHKPSQVSFRRI-KALMELANKQEAL 239
EM++KG P+ ++ + AL++ EAL
Sbjct: 186 ILEEMMKKGLAPNVYTWNSLMDALVKAEEINEAL 219
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/132 (21%), Positives = 57/132 (43%)
Query: 95 RLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCM 154
R D + EM +G P+ T N + + + D+ ++ + G G LP+ +S
Sbjct: 4 RKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYS 63
Query: 155 FLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEK 214
L+ + + +++ M ++GF + + D C GK+ +A ++ EM K
Sbjct: 64 ILIHGLTKAGQARETSSIFHAMKQRGFALDARAYNAVVDGFCKSGKVDKAYEALEEMKVK 123
Query: 215 GHKPSQVSFRRI 226
P+ ++ I
Sbjct: 124 HVPPTVATYGSI 135
>gi|147797511|emb|CAN71434.1| hypothetical protein VITISV_010168 [Vitis vinifera]
Length = 814
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 116/247 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G +P I Y L+ CK ++ +A + +M E PD+++Y++ I G +
Sbjct: 513 MRVHGHEPWIKHYTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKA 572
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A ++ +++ G PD AYN I +C KR+ +A ++DEMV KGL P+ TYNL
Sbjct: 573 VDQALEIFRDICARGYCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNL 632
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + D+ +++ RM+G PN + L+ + + A+ LWN+M KG
Sbjct: 633 LIDGWCKNGDIDQAFHCLSRMVGKEREPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKG 692
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ L LC G A F EM E+ + V I + + N A +
Sbjct: 693 CSPNRISFIALIHGLCKCGWPDAALLYFREMGERETPDTIVYVALITSFISNKNPTLAFE 752
Query: 241 NLSNKMA 247
L +A
Sbjct: 753 ILKEMVA 759
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 119/262 (45%), Gaps = 2/262 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G K +++ YN LID ++E+ Y ++++M+ P ++ SI G L
Sbjct: 443 MVRVGCKQNVLLYNNLIDKLSNSNRLEECYLLLKEMKGSGFRPTQFTHNSIFGCLCRRED 502
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A D+++EM+ +G P Y ++ C KR +A + EMV +G P+ Y+
Sbjct: 503 VTGALDMVREMRVHGHEPWIKHYTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSA 562
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + + ++ + G P+ + L+ + ++V A + ++MV KG
Sbjct: 563 AIDGFVKIKAVDQALEIFRDICARGYCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKG 622
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
++ ++L D C G + +A M+ K +P+ +++ + + A + +
Sbjct: 623 LVPSVVTYNLLIDGWCKNGDIDQAFHCLSRMVGKEREPNVITYTTLIDGLCNAGRPDDAI 682
Query: 241 NLSNKMALFGPSMIPKREEYLA 262
+L N+M G P R ++A
Sbjct: 683 HLWNEMR--GKGCSPNRISFIA 702
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 110/242 (45%), Gaps = 18/242 (7%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++G++ + ++ LI + + +V+KA ++ +KM+ +PDV Y ++IGGL +
Sbjct: 254 MEDLGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKMQKSGFAPDVSVYDALIGGLCAKKE 313
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYC---------IAKRLRD----ASGLMDEMV 107
+KA +L EMKE G PD + I YC I +RL D A L+ V
Sbjct: 314 IEKALHLLSEMKELGIDPDIQILSKLIP-YCSEEVDIYRLIEERLEDLDTEAMLLLYNSV 372
Query: 108 EKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCR---MMGTGCLPNTQSCMFLVKLCKRQE 164
GL + ++ + + D + N M+ P T S ++
Sbjct: 373 LNGLVNGKSVDKAYYLLXAMTGDNYTD-NFEVNKFFMVKEMVRPXTTSFSIVIDGLCNTG 431
Query: 165 KVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
K+++AL L+ DMV G +L+ + L D L + +L E EM G +P+Q +
Sbjct: 432 KLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRLEECYLLLKEMKGSGFRPTQFTHN 491
Query: 225 RI 226
I
Sbjct: 492 SI 493
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 103/243 (42%), Gaps = 18/243 (7%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDED----------------ISPD 44
+ ++ + ++ YN +++ + V+KAY ++ M ++ + P
Sbjct: 357 LEDLDTEAMLLLYNSVLNGLVNGKSVDKAYYLLXAMTGDNYTDNFEVNKFFMVKEMVRPX 416
Query: 45 VISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMD 104
S++ +I GL G+ D A + ++M GC + YN I + RL + L+
Sbjct: 417 TTSFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRLEECYLLLK 476
Query: 105 EMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQ 163
EM G P T+N F D+ + ++ M G P + LVK LCKR+
Sbjct: 477 EMKGSGFRPTQFTHNSIFGCLCRREDVTGALDMVREMRVHGHEPWIKHYTLLVKQLCKRK 536
Query: 164 EKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
E A +MV +GF I+ D + + +A + F ++ +G+ P V++
Sbjct: 537 RSAE-ACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVVAY 595
Query: 224 RRI 226
+
Sbjct: 596 NTL 598
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 71/153 (46%), Gaps = 34/153 (22%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ P +V+YN LID +CK+ +++A+ + +M ++ P+VI+YT++I GL G+
Sbjct: 618 MVAKGLVPSVVTYNLLIDGWCKNGDIDQAFHCLSRMVGKEREPNVITYTTLIDGLCNAGR 677
Query: 61 PDKARDVLKEMKEYGC------------------YPDAA----------------AYNAA 86
PD A + EM+ GC +PDAA Y A
Sbjct: 678 PDDAIHLWNEMRGKGCSPNRISFIALIHGLCKCGWPDAALLYFREMGERETPDTIVYVAL 737
Query: 87 IRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
I ++ K A ++ EMV KG P+ N
Sbjct: 738 ITSFISNKNPTLAFEILKEMVAKGKFPDPLDKN 770
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 101/226 (44%), Gaps = 7/226 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
++EM V+P S++ +ID C +++ A + M +V+ Y ++I L +
Sbjct: 409 VKEM-VRPXTTSFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNR 467
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMD---EMVEKGLSPNATT 117
++ +LKEMK G P +N+ C R D +G +D EM G P
Sbjct: 468 LEECYLLLKEMKGSGFRPTQFTHNSIFGCLC---RREDVTGALDMVREMRVHGHEPWIKH 524
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
Y L + + N M+ G LP+ + + + + V+ AL+++ D+
Sbjct: 525 YTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDIC 584
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+G+ ++ + L + C + ++ EA EM+ KG PS V++
Sbjct: 585 ARGYCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTY 630
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 74/167 (44%), Gaps = 1/167 (0%)
Query: 52 IGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGL 111
+G + G D LKEM + G PD + ++ YC +++ A + +E+ +G
Sbjct: 166 LGAISKSGSIDLVEMRLKEMCDSGWEPDKYTLTSVLQAYCNSRKFDKALSVFNEIYGRGW 225
Query: 112 SPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQ 171
+ ++ F ++ ++ L RM G N ++ L+ RQ +V+ ALQ
Sbjct: 226 V-DGHVLSILVLTFSKCGEVDKAFELIERMEDLGIRLNEKTFCVLIHGFVRQSRVDKALQ 284
Query: 172 LWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
L+ M + GF + V D L LC ++ +A EM E G P
Sbjct: 285 LFKKMQKSGFAPDVSVYDALIGGLCAKKEIEKALHLLSEMKELGIDP 331
Score = 40.0 bits (92), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 44/100 (44%), Gaps = 1/100 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G P+ +S+ LI CK + A +M + + +PD I Y ++I
Sbjct: 688 MRGKGCSPNRISFIALIHGLCKCGWPDAALLYFREMGERE-TPDTIVYVALITSFISNKN 746
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDAS 100
P A ++LKEM G +PD N I + DAS
Sbjct: 747 PTLAFEILKEMVAKGKFPDPLDKNDLPLRDAILELAEDAS 786
>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
Length = 479
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 125/253 (49%), Gaps = 13/253 (5%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRD-EDISPDVISYTSIIGGLGLVG 59
M E G++P+ ++Y ++D CK A ++ KM + I PDV+ Y++II GL G
Sbjct: 107 MVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDG 166
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ A+++ EM++ G +PD Y+ I +C + + +A L+ EM+ + +SP+ T++
Sbjct: 167 RHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFS 226
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE- 178
DL S+ +L M+ +G PN +C L+ K++ AL+++ M +
Sbjct: 227 GLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKS 286
Query: 179 ----------KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IK 227
G + ++L L + GK +EAE+ + EM +G P V++ I
Sbjct: 287 MMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMIN 346
Query: 228 ALMELANKQEALQ 240
L + + EA Q
Sbjct: 347 GLCKQSRLDEATQ 359
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 86/172 (50%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV+PD+ +YN LI + + +A ++ E+M I PD ++Y+S+I GL + D+A
Sbjct: 298 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEA 357
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ M P+ +N I YC A + D L EM +G+ NA TY R
Sbjct: 358 TQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRG 417
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDM 176
F ++ S +++ M+ +G P+T + ++ +E+++ AL + ++
Sbjct: 418 FRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKKALAMLEEL 469
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 93/191 (48%), Gaps = 11/191 (5%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKA---YKIVEK-MRDED-------ISPDVISYT 49
M GV P++V+ N L+D C +++ A +K ++K M D D + PDV +Y
Sbjct: 248 MISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYN 307
Query: 50 SIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEK 109
+I GL G+ +A ++ +EM G PD Y++ I C RL +A+ + D M K
Sbjct: 308 ILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSK 367
Query: 110 GLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIA 169
SPN T+N + + + L+C M G + N + + L++ ++ + +
Sbjct: 368 SFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGS 427
Query: 170 LQLWNDMVEKG 180
L ++ +M+ G
Sbjct: 428 LDIFQEMISSG 438
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 121/283 (42%), Gaps = 48/283 (16%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G+ PDIV+Y+C+I+ +C + +A +++++M ISPDV++++ +I L G
Sbjct: 178 MQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGD 237
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDA--------------------- 99
+ A+D+L+EM G P+ N + C + +L+DA
Sbjct: 238 LNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFN 297
Query: 100 -------------SGLMDE------------MVEKGLSPNATTYNLFFRVFYWSNDLRSS 134
SGL++E M +G+ P+ TY+ + L +
Sbjct: 298 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEA 357
Query: 135 WNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDL 194
++ M PN + L+ + V+ L+L+ +M +G + + L
Sbjct: 358 TQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRG 417
Query: 195 LCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQE 237
+G + + F EMI G P ++ R + L L +K+E
Sbjct: 418 FRKVGNINGSLDIFQEMISSGVYPDTITIRNM--LTGLWSKEE 458
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 107/239 (44%), Gaps = 9/239 (3%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
DI S+N LI +C ++ A K+ P ++++ +++ GL + + +A D+
Sbjct: 14 DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
+M C P+ + + C R+ +A L+D MVE GL PN TY
Sbjct: 74 HQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 129
Query: 129 NDLRSSWNLYCRMMGTGCL-PNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
D S+ NL +M + P+ ++ + + A L+ +M +KG I+
Sbjct: 130 GDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVT 189
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALM---ELANKQEALQNL 242
+ + C GK EA++ EM+ + P V+F I AL+ +L + Q+ LQ +
Sbjct: 190 YSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEM 248
>gi|449431996|ref|XP_004133786.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Cucumis sativus]
gi|449477985|ref|XP_004155184.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Cucumis sativus]
Length = 485
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 110/222 (49%), Gaps = 11/222 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ D VSY I Y K R + K ++ E M+ I PD Y ++I L
Sbjct: 210 MTRRGISHDAVSYASCISCYSKVRNLHKVLRLFEDMKRMKIDPDRKVYNAVIHSLAKGRC 269
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A D++K M+E G + YN+ I+ C A+R +A + +E++++GL P TY+
Sbjct: 270 LKEAADLIKTMEEKGIIANVVTYNSVIKPLCKARRFDEARAVFEELLQRGLCPTIQTYHA 329
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F R ++ + L +M GC P T + + L++ R +++ ++W++M E G
Sbjct: 330 FLRFLRTEEEI---FELLKKMRTMGCNPTTDTYIMLIRKFCRWRQLDNVSRIWHEMSENG 386
Query: 181 F----GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
SYI++ LF GKL +A K +LEM EK P
Sbjct: 387 ISPDRSSYIVLIHGLF----LNGKLEDAHKYYLEMKEKDLLP 424
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 42/79 (53%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR MG P +Y LI +C+ RQ++ +I +M + ISPD SY +I GL L G+
Sbjct: 347 MRTMGCNPTTDTYIMLIRKFCRWRQLDNVSRIWHEMSENGISPDRSSYIVLIHGLFLNGK 406
Query: 61 PDKARDVLKEMKEYGCYPD 79
+ A EMKE P+
Sbjct: 407 LEDAHKYYLEMKEKDLLPE 425
>gi|356560497|ref|XP_003548528.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
mitochondrial-like [Glycine max]
Length = 490
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 130/250 (52%), Gaps = 4/250 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G P ++SY+ LI YC++ + Y+++++M+ + S +VI+YTSI+ LG +
Sbjct: 238 MKGYGFHPCVISYSTLIQCYCQEGNFSRVYELLDEMQAQGCSANVITYTSIMCALGKAKK 297
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMD-EMVEKGLSPNATTYN 119
++A V + M+ GC PD +N+ I A RL DA+ + EM + G+SPN +TYN
Sbjct: 298 FEEALKVPERMRSSGCRPDTLFFNSLIHTLGRAGRLDDAADVFKVEMPKAGVSPNTSTYN 357
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGT-GCLPNTQSCMFLVKLCKRQEKVEIAL-QLWNDMV 177
+F + + + + M + GC P+ Q+ L+K C R K++ L ++ NDM+
Sbjct: 358 SMISMFCYHAQEKRALEILKEMENSGGCKPDAQTYHPLIKSCFRSGKIDGVLSEILNDMI 417
Query: 178 EKGFGSYILVS-DVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQ 236
K S L + +L LC + A F EMI++ P + R + ++ N
Sbjct: 418 NKQHLSLDLSTYTLLIHGLCREDRCNWAFSLFEEMIDQDIIPRYRTCRLLLDEVKQKNMY 477
Query: 237 EALQNLSNKM 246
+A + + + M
Sbjct: 478 QAAEKIEDLM 487
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 108/230 (46%), Gaps = 11/230 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
++ +G++ + S N L+D CK++ V++A +I +++ + I+P+ ++ I G + +
Sbjct: 169 LQALGLEKNTESMNLLLDTLCKEKFVQQAREIFLELK-QHIAPNAHTFNIFIHGWCKICR 227
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A ++EMK YG +P +Y+ I+ YC L+DEM +G S N TY
Sbjct: 228 VDEAHWTIQEMKGYGFHPCVISYSTLIQCYCQEGNFSRVYELLDEMQAQGCSANVITYTS 287
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWN-DMVEK 179
+ + + RM +GC P+T L+ R +++ A ++ +M +
Sbjct: 288 IMCALGKAKKFEEALKVPERMRSSGCRPDTLFFNSLIHTLGRAGRLDDAADVFKVEMPKA 347
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEK-----GHKPSQVSFR 224
G + + + C + EK LE++++ G KP ++
Sbjct: 348 GVSPNTSTYNSMISMFCYHAQ----EKRALEILKEMENSGGCKPDAQTYH 393
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/247 (20%), Positives = 98/247 (39%), Gaps = 36/247 (14%)
Query: 12 SYNCLIDVYCKDRQVEKAYKIVEKMRDEDISP------------------DVISYTSIIG 53
SY+ ++D+ + + +EK ++E+MR+ + D + +
Sbjct: 111 SYDMMVDILGRMKVMEKLRDLLEEMREGGLVNMNTVAKAMRRFVGAGQWVDAVRIFDDLQ 170
Query: 54 GLGLVGQPD----------------KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLR 97
LGL + +AR++ E+K++ P+A +N I +C R+
Sbjct: 171 ALGLEKNTESMNLLLDTLCKEKFVQQAREIFLELKQH-IAPNAHTFNIFIHGWCKICRVD 229
Query: 98 DASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV 157
+A + EM G P +Y+ + + + + L M GC N + ++
Sbjct: 230 EAHWTIQEMKGYGFHPCVISYSTLIQCYCQEGNFSRVYELLDEMQAQGCSANVITYTSIM 289
Query: 158 KLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSF-LEMIEKGH 216
+ +K E AL++ M G L + L L G+L +A F +EM + G
Sbjct: 290 CALGKAKKFEEALKVPERMRSSGCRPDTLFFNSLIHTLGRAGRLDDAADVFKVEMPKAGV 349
Query: 217 KPSQVSF 223
P+ ++
Sbjct: 350 SPNTSTY 356
Score = 40.4 bits (93), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 84/198 (42%), Gaps = 9/198 (4%)
Query: 47 SYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEM 106
SY ++ LG + +K RD+L+EM+E G + A+R + A + DA + D++
Sbjct: 111 SYDMMVDILGRMKVMEKLRDLLEEMRE-GGLVNMNTVAKAMRRFVGAGQWVDAVRIFDDL 169
Query: 107 VEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSC-MFLVKLCK--RQ 163
GL N + NL ++ + ++ + PN + +F+ CK R
Sbjct: 170 QALGLEKNTESMNLLLDTLCKEKFVQQAREIFLE-LKQHIAPNAHTFNIFIHGWCKICRV 228
Query: 164 EKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ +Q +M GF ++ L C G + EM +G + +++
Sbjct: 229 DEAHWTIQ---EMKGYGFHPCVISYSTLIQCYCQEGNFSRVYELLDEMQAQGCSANVITY 285
Query: 224 RRIKALMELANK-QEALQ 240
I + A K +EAL+
Sbjct: 286 TSIMCALGKAKKFEEALK 303
>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
Length = 1144
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 110/226 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ P++V+Y+ +I CK + ++KA +++ M + P+ +Y SI+ G GQ
Sbjct: 225 MLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQ 284
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
P +A LK+M G PD YN+ + C R +A + D M ++GL P TTY
Sbjct: 285 PKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGT 344
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + L L M+ G PN L+ +Q KV+ A+ +++ M ++G
Sbjct: 345 LLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQG 404
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + +LC G++ +A + F +MI++ P + + +
Sbjct: 405 LNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSL 450
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 110/217 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G+ PD V+Y +I + CK +VE A + E+M DE +SP I Y S+I L + +
Sbjct: 400 MRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDK 459
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA++++ EM + G D +N+ I ++C R+ ++ L D MV G+ P+ TY+
Sbjct: 460 WDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYST 519
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + + L M+ G P+ + L+ + ++E AL L+ +M G
Sbjct: 520 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSG 579
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHK 217
I+ +++ L + A++ ++ + E G +
Sbjct: 580 VSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQ 616
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 105/226 (46%), Gaps = 4/226 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDE--DISPDVISYTSIIGGLGLV 58
M ++G P++ SYN L+ C + + ++A ++++ M D+ D PDV+SYT++I G
Sbjct: 153 MTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKE 212
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
G DKA EM + G P+ Y++ I C A+ + A ++ MV+ G+ PN TY
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMV 177
N + S + + +M G P+ + L+ LCK E A ++++ M
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTE-ARKMFDSMT 331
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++G I L G LVE M+ G P+ F
Sbjct: 332 KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVF 377
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 108/215 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV P+ +YN ++ YC Q ++A ++KM + + PDV++Y S++ L G+
Sbjct: 260 MVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGR 319
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR + M + G P+ Y ++ Y L + GL+D MV G+ PN +++
Sbjct: 320 CTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSI 379
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + ++ +M G P+T + ++ + + +VE A++ + M+++
Sbjct: 380 LICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDER 439
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
+V + L LC K +A++ LEM+++G
Sbjct: 440 LSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG 474
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 108/257 (42%), Gaps = 40/257 (15%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
V P++ +Y LI C +++ + + + + D I++T ++ GL + A
Sbjct: 87 VTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAM 146
Query: 66 D-VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKG--LSPNATTYNLFF 122
D VL+ M + GC P+ +YN ++ C R ++A L+ M + G P+ +Y
Sbjct: 147 DIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVI 206
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKG- 180
F+ DL ++ Y M+ G LPN + + LCK Q ++ A+++ MV+ G
Sbjct: 207 NGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQ-AMDKAMEVLTSMVKNGV 265
Query: 181 ------FGSY----------------------------ILVSDVLFDLLCDMGKLVEAEK 206
+ S ++ + L D LC G+ EA K
Sbjct: 266 MPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARK 325
Query: 207 SFLEMIEKGHKPSQVSF 223
F M ++G KP ++
Sbjct: 326 MFDSMTKRGLKPEITTY 342
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 103/226 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ P+ ++ LI Y K +V++A + KMR + ++PD ++Y ++IG L G+
Sbjct: 365 MVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGR 424
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A ++M + P YN+ I + CI + A L+ EM+++G+ + +N
Sbjct: 425 VEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNS 484
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ S L+ M+ G P+ + L+ K++ A +L MV G
Sbjct: 485 IIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVG 544
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + L + C + ++ +A F EM G P +++ I
Sbjct: 545 MKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNII 590
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 64/123 (52%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +GVKPDI++Y+ LID YC ++++A K++ M + PD ++Y ++I G + +
Sbjct: 505 MVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISR 564
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A + +EM+ G PD YN ++ +R A L + E G +TYN+
Sbjct: 565 MEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNI 624
Query: 121 FFR 123
Sbjct: 625 ILH 627
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 59/131 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+ E G + ++ +YN ++ CK+ ++A ++ + + D+ + ++ +IG L VG+
Sbjct: 610 ITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGR 669
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A+D+ + G PD Y+ N L + L M E G + N+ N
Sbjct: 670 NDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNS 729
Query: 121 FFRVFYWSNDL 131
R D+
Sbjct: 730 IVRKLLQRGDI 740
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 80/197 (40%), Gaps = 4/197 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV PDI++YN ++ + R+ A ++ + + ++ +Y I+ GL
Sbjct: 575 MESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNL 634
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + + + + +N I R +A L + GL P+ TY+L
Sbjct: 635 TDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSL 694
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMV-E 178
L +L+ M GC N++ +V KL +R + L+ M+ E
Sbjct: 695 MAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLF--MIDE 752
Query: 179 KGFGSYILVSDVLFDLL 195
K F + + DLL
Sbjct: 753 KHFSLEASTASLFLDLL 769
>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
Length = 479
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 125/253 (49%), Gaps = 13/253 (5%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRD-EDISPDVISYTSIIGGLGLVG 59
M E G++P+ ++Y ++D CK A ++ KM + I PDV+ Y++II GL G
Sbjct: 107 MVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDG 166
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ A+++ EM++ G +PD Y+ I +C + + +A L+ EM+ + +SP+ T++
Sbjct: 167 RHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFS 226
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE- 178
DL S+ +L M+ +G PN +C L+ K++ AL+++ M +
Sbjct: 227 GLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKS 286
Query: 179 ----------KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IK 227
G + ++L L + GK +EAE+ + EM +G P V++ I
Sbjct: 287 MMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMIN 346
Query: 228 ALMELANKQEALQ 240
L + + EA Q
Sbjct: 347 GLCKQSRLDEATQ 359
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 86/172 (50%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV+PD+ +YN LI + + +A ++ E+M I PD ++Y+S+I GL + D+A
Sbjct: 298 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEA 357
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ M P+ +N I YC A + D L EM +G+ NA TY R
Sbjct: 358 TQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRG 417
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDM 176
F ++ S +++ M+ +G P+T + ++ +E+++ AL + ++
Sbjct: 418 FRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRALAMLEEL 469
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 93/191 (48%), Gaps = 11/191 (5%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKA---YKIVEK-MRDED-------ISPDVISYT 49
M GV P++V+ N L+D C +++ A +K ++K M D D + PDV +Y
Sbjct: 248 MISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYN 307
Query: 50 SIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEK 109
+I GL G+ +A ++ +EM G PD Y++ I C RL +A+ + D M K
Sbjct: 308 ILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSK 367
Query: 110 GLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIA 169
SPN T+N + + + L+C M G + N + + L++ ++ + +
Sbjct: 368 SFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGS 427
Query: 170 LQLWNDMVEKG 180
L ++ +M+ G
Sbjct: 428 LDIFQEMISSG 438
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 121/283 (42%), Gaps = 48/283 (16%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G+ PDIV+Y+C+I+ +C + +A +++++M ISPDV++++ +I L G
Sbjct: 178 MQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGD 237
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDA--------------------- 99
+ A+D+L+EM G P+ N + C + +L+DA
Sbjct: 238 LNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFN 297
Query: 100 -------------SGLMDE------------MVEKGLSPNATTYNLFFRVFYWSNDLRSS 134
SGL++E M +G+ P+ TY+ + L +
Sbjct: 298 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEA 357
Query: 135 WNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDL 194
++ M PN + L+ + V+ L+L+ +M +G + + L
Sbjct: 358 TQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRG 417
Query: 195 LCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQE 237
+G + + F EMI G P ++ R + L L +K+E
Sbjct: 418 FRKVGNINGSLDIFQEMISSGVYPDTITIRNM--LTGLWSKEE 458
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 107/239 (44%), Gaps = 9/239 (3%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
DI S+N LI +C ++ A K+ P ++++ +++ GL + + +A D+
Sbjct: 14 DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
+M C P+ + + C R+ +A L+D MVE GL PN TY
Sbjct: 74 HQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 129
Query: 129 NDLRSSWNLYCRMMGTGCL-PNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
D S+ NL +M + P+ ++ + + A L+ +M +KG I+
Sbjct: 130 GDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVT 189
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALM---ELANKQEALQNL 242
+ + C GK EA++ EM+ + P V+F I AL+ +L + Q+ LQ +
Sbjct: 190 YSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEM 248
>gi|225465635|ref|XP_002270253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08310, mitochondrial [Vitis vinifera]
gi|296085293|emb|CBI29025.3| unnamed protein product [Vitis vinifera]
Length = 854
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 116/247 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G +P I Y L+ CK ++ +A + +M E PD+++Y++ I G +
Sbjct: 553 MRVHGHEPWIKHYTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKA 612
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A ++ +++ G PD AYN I +C KR+ +A ++DEMV KGL P+ TYNL
Sbjct: 613 VDQALEIFRDICARGYCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNL 672
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + D+ +++ RM+G PN + L+ + + A+ LWN+M KG
Sbjct: 673 LIDGWCKNGDIDQAFHCLSRMVGKEREPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKG 732
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ L LC G A F EM E+ + V I + + N A +
Sbjct: 733 CSPNRISFIALIHGLCKCGWPDAALLYFREMGERETPDTIVYVALITSFISNKNPTLAFE 792
Query: 241 NLSNKMA 247
L +A
Sbjct: 793 ILKEMVA 799
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 119/262 (45%), Gaps = 2/262 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G K +++ YN LID ++E+ Y ++++M+ P ++ SI G L
Sbjct: 483 MVRVGCKQNVLLYNNLIDKLSNSNRLEECYLLLKEMKGSGFRPTQFTHNSIFGCLCRRED 542
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A D+++EM+ +G P Y ++ C KR +A + EMV +G P+ Y+
Sbjct: 543 VTGALDMVREMRVHGHEPWIKHYTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSA 602
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + + ++ + G P+ + L+ + ++V A + ++MV KG
Sbjct: 603 AIDGFVKIKAVDQALEIFRDICARGYCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKG 662
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
++ ++L D C G + +A M+ K +P+ +++ + + A + +
Sbjct: 663 LVPSVVTYNLLIDGWCKNGDIDQAFHCLSRMVGKEREPNVITYTTLIDGLCNAGRPDDAI 722
Query: 241 NLSNKMALFGPSMIPKREEYLA 262
+L N+M G P R ++A
Sbjct: 723 HLWNEMR--GKGCSPNRISFIA 742
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 104/243 (42%), Gaps = 18/243 (7%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDED----------------ISPD 44
+ ++ + ++ YN +++ + V+KAY ++ M ++ + PD
Sbjct: 397 LEDLDTEAMLLLYNSVLNGLVNGKSVDKAYYLLRAMTGDNYTDNFEVNKFFMVKEMVRPD 456
Query: 45 VISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMD 104
S++ +I GL G+ D A + ++M GC + YN I + RL + L+
Sbjct: 457 TTSFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRLEECYLLLK 516
Query: 105 EMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQ 163
EM G P T+N F D+ + ++ M G P + LVK LCKR+
Sbjct: 517 EMKGSGFRPTQFTHNSIFGCLCRREDVTGALDMVREMRVHGHEPWIKHYTLLVKQLCKRK 576
Query: 164 EKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
E A +MV +GF I+ D + + +A + F ++ +G+ P V++
Sbjct: 577 RSAE-ACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVVAY 635
Query: 224 RRI 226
+
Sbjct: 636 NTL 638
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 111/242 (45%), Gaps = 18/242 (7%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++G++ + ++ LI + + +V+KA ++ +KM+ +PDV Y ++IGGL +
Sbjct: 294 MEDLGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKMQKSGFAPDVSVYDALIGGLCAKKE 353
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYC---------IAKRLRD----ASGLMDEMV 107
+KA +L EMKE G PD + I YC I +RL D A L+ V
Sbjct: 354 IEKALHLLSEMKELGIDPDIQILSKLIA-YCSEEVDIYRLIEERLEDLDTEAMLLLYNSV 412
Query: 108 EKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCR---MMGTGCLPNTQSCMFLVKLCKRQE 164
GL + ++ + + D + N M+ P+T S ++
Sbjct: 413 LNGLVNGKSVDKAYYLLRAMTGDNYTD-NFEVNKFFMVKEMVRPDTTSFSIVIDGLCNTG 471
Query: 165 KVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
K+++AL L+ DMV G +L+ + L D L + +L E EM G +P+Q +
Sbjct: 472 KLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRLEECYLLLKEMKGSGFRPTQFTHN 531
Query: 225 RI 226
I
Sbjct: 532 SI 533
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 102/226 (45%), Gaps = 7/226 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
++EM V+PD S++ +ID C +++ A + M +V+ Y ++I L +
Sbjct: 449 VKEM-VRPDTTSFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNR 507
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMD---EMVEKGLSPNATT 117
++ +LKEMK G P +N+ C R D +G +D EM G P
Sbjct: 508 LEECYLLLKEMKGSGFRPTQFTHNSIFGCLC---RREDVTGALDMVREMRVHGHEPWIKH 564
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
Y L + + N M+ G LP+ + + + + V+ AL+++ D+
Sbjct: 565 YTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDIC 624
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+G+ ++ + L + C + ++ EA EM+ KG PS V++
Sbjct: 625 ARGYCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTY 670
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 71/153 (46%), Gaps = 34/153 (22%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ P +V+YN LID +CK+ +++A+ + +M ++ P+VI+YT++I GL G+
Sbjct: 658 MVAKGLVPSVVTYNLLIDGWCKNGDIDQAFHCLSRMVGKEREPNVITYTTLIDGLCNAGR 717
Query: 61 PDKARDVLKEMKEYGC------------------YPDAA----------------AYNAA 86
PD A + EM+ GC +PDAA Y A
Sbjct: 718 PDDAIHLWNEMRGKGCSPNRISFIALIHGLCKCGWPDAALLYFREMGERETPDTIVYVAL 777
Query: 87 IRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
I ++ K A ++ EMV KG P+ N
Sbjct: 778 ITSFISNKNPTLAFEILKEMVAKGKFPDPLDKN 810
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 78/176 (44%), Gaps = 1/176 (0%)
Query: 43 PDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGL 102
P+ S+ ++ + G D LKEM + G PD + ++ YC +++ A +
Sbjct: 197 PNSYSFNCLLEAISKSGSIDLVEMRLKEMCDSGWEPDKYTLTSVLQAYCNSRKFDKALSV 256
Query: 103 MDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKR 162
+E+ +G + ++ F ++ ++ L RM G N ++ L+ R
Sbjct: 257 FNEIYGRGWV-DGHVLSILVLTFSKCGEVDKAFELIERMEDLGIRLNEKTFCVLIHGFVR 315
Query: 163 QEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
Q +V+ ALQL+ M + GF + V D L LC ++ +A EM E G P
Sbjct: 316 QSRVDKALQLFKKMQKSGFAPDVSVYDALIGGLCAKKEIEKALHLLSEMKELGIDP 371
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 3/174 (1%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P+ S+NCL++ K ++ +++M D PD + TS++ + DKA V
Sbjct: 197 PNSYSFNCLLEAISKSGSIDLVEMRLKEMCDSGWEPDKYTLTSVLQAYCNSRKFDKALSV 256
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
E+ G + D + + + + A L++ M + G+ N T+ + F
Sbjct: 257 FNEIYGRG-WVDGHVLSILVLTFSKCGEVDKAFELIERMEDLGIRLNEKTFCVLIHGFVR 315
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEKG 180
+ + + L+ +M +G P+ L+ LC ++E +E AL L ++M E G
Sbjct: 316 QSRVDKALQLFKKMQKSGFAPDVSVYDALIGGLCAKKE-IEKALHLLSEMKELG 368
Score = 40.4 bits (93), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 44/100 (44%), Gaps = 1/100 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G P+ +S+ LI CK + A +M + + +PD I Y ++I
Sbjct: 728 MRGKGCSPNRISFIALIHGLCKCGWPDAALLYFREMGERE-TPDTIVYVALITSFISNKN 786
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDAS 100
P A ++LKEM G +PD N I + DAS
Sbjct: 787 PTLAFEILKEMVAKGKFPDPLDKNDLPLRDAILELAEDAS 826
>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Brachypodium distachyon]
Length = 966
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 117/243 (48%), Gaps = 18/243 (7%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD +Y +I C+ ++VEK++ + ++M+ ++PDV +YT +I G
Sbjct: 443 MMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGL 502
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++AR EM+ GC P+ Y A + Y +K+L A + MV+ PNA TY+
Sbjct: 503 IEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSA 562
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTG----------------CLPNTQSCMFLVK-LCKRQ 163
+ +++ + +Y +++GT PN + L+ LCK Q
Sbjct: 563 LIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQ 622
Query: 164 EKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
KV A +L + M+ G +V D L D C +GK+ A++ FL M + G+ PS ++
Sbjct: 623 -KVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTY 681
Query: 224 RRI 226
+
Sbjct: 682 TSL 684
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 113/237 (47%), Gaps = 6/237 (2%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P++V+Y +ID K ++EKA ++ M ++ SP+V++YT++I GLG G+ D + +
Sbjct: 711 PNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKL 770
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
K+M GC P+ Y I + C A L +A L+DEM + Y+ + F
Sbjct: 771 FKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGF-- 828
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
S +S L M +P L+ + ++E AL+L ++VE +
Sbjct: 829 SKKFIASLGLLEEMESHETVPIAPVYGMLIDSFSKAGRLETALELHKELVEVSSSLNMTS 888
Query: 188 SDV---LFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF-RRIKALMELANKQEALQ 240
+ + L LC ++ EA + EM KG P + F +K L+E+ EALQ
Sbjct: 889 TGMYASLIQALCLASQVEEAFTLYTEMTRKGIVPDLIVFVSLVKGLIEVNKWDEALQ 945
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 124/262 (47%), Gaps = 16/262 (6%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR +G P++V+Y L+ Y K +Q+ +A+ I +M D P+ ++Y+++I GL G+
Sbjct: 513 MRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGE 572
Query: 61 PDKARDVLKEM------KEYGCY----------PDAAAYNAAIRNYCIAKRLRDASGLMD 104
KA +V +++ E Y P+ Y A I C A+++ DA L+D
Sbjct: 573 IQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLD 632
Query: 105 EMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQE 164
M+ G PN Y+ F + ++ ++ RM G LP+ + L+ +
Sbjct: 633 AMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDG 692
Query: 165 KVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
++++A+++ ++M+ ++ + D L +G++ +A M EKG P+ V++
Sbjct: 693 RLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYT 752
Query: 225 RIKALMELANKQEALQNLSNKM 246
+ + K +A L +M
Sbjct: 753 ALIDGLGKTGKADASLKLFKQM 774
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 108/240 (45%), Gaps = 16/240 (6%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDED----------------ISPD 44
M + P+ V+Y+ LID CK +++KA ++ EK+ I+P+
Sbjct: 548 MVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPN 607
Query: 45 VISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMD 104
V++Y ++I GL + A ++L M GC P+ Y+A I +C ++ +A +
Sbjct: 608 VVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFL 667
Query: 105 EMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQE 164
M + G P+ TY + L + + M+ C PN + ++ +
Sbjct: 668 RMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVG 727
Query: 165 KVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
++E AL L + M EKG ++ L D L GK + K F +M KG P+ V++R
Sbjct: 728 EIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYR 787
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 98/216 (45%), Gaps = 1/216 (0%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ P++V+Y LID CK ++V A+++++ M P+ I Y ++I G +G+ D A+
Sbjct: 604 IAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQ 663
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+V M + G P Y + I RL A ++ EM+ +PN TY
Sbjct: 664 EVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGL 723
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
++ + NL M GC PN + L+ + K + +L+L+ M KG
Sbjct: 724 SKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNY 783
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQV 221
+ VL + C G L EA L+ ++ H P +
Sbjct: 784 VTYRVLINHCCAAGLLDEAHL-LLDEMKHTHWPKHL 818
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 73/160 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G +P+ + Y+ LID +CK +++ A ++ +M P V +YTS+I + G+
Sbjct: 634 MLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGR 693
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A VL EM C P+ Y A I + A L+ M EKG SPN TY
Sbjct: 694 LDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTA 753
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLC 160
+ +S L+ +M GC PN + L+ C
Sbjct: 754 LIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHC 793
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 112/278 (40%), Gaps = 44/278 (15%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKM------------------------ 36
+++ G +P V+YN L+ V QVE +++ ++M
Sbjct: 195 LKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSASGFCMDRSTIGYFAQALCKVGR 254
Query: 37 --------RDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIR 88
ED + D + T +I GL ++A L M+ C P+ Y +
Sbjct: 255 WADALNMLEKEDFNLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSCIPNVVTYRTLLS 314
Query: 89 NYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLP 148
+ K+ +++ M+ +G +PN + +N + + D ++ L+ RM G P
Sbjct: 315 GFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPP 374
Query: 149 N-TQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDL--------LCDMG 199
+F+ +C ++E L D+VEK + + S VL + LC +G
Sbjct: 375 GYVAYNIFIGSICGQEELPNAELL---DLVEKVYEEMLAASCVLNKVNTANFSRCLCGVG 431
Query: 200 KLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQE 237
K +A + EM+ KG P ++ ++ + A K E
Sbjct: 432 KFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVE 469
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 93/229 (40%), Gaps = 6/229 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR P++V+Y L+ + K +Q +I+ M E +P+ + S++ G G
Sbjct: 297 MRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGD 356
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGL------MDEMVEKGLSPN 114
A + M G P AYN I + C + L +A L +EM+ N
Sbjct: 357 YAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLN 416
Query: 115 ATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWN 174
F R ++ + MM G +P+T + ++ + +KVE + L+
Sbjct: 417 KVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQ 476
Query: 175 DMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+M G + +L D C G + +A F EM G P+ V++
Sbjct: 477 EMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTY 525
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 83/205 (40%), Gaps = 12/205 (5%)
Query: 28 KAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAI 87
+A + +MR P+V++Y +++ G Q + ++ M GC P+ + +N+ +
Sbjct: 289 EAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLV 348
Query: 88 RNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNL------YCRM 141
YC A A L + M G P YN+F +L ++ L Y M
Sbjct: 349 HGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEM 408
Query: 142 MGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKL 201
+ C+ N + + K E A Q+ +M+ KGF + LC K+
Sbjct: 409 LAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKV 468
Query: 202 VEAEKSFL---EMIEKGHKPSQVSF 223
EKSFL EM G P ++
Sbjct: 469 ---EKSFLLFQEMKRAGVNPDVYTY 490
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 87/231 (37%), Gaps = 10/231 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P+ +N L+ YC AYK+ +M P ++Y IG + GQ
Sbjct: 332 MMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSI--CGQ 389
Query: 61 P--------DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLS 112
D V +EM C + R C + A ++ EM+ KG
Sbjct: 390 EELPNAELLDLVEKVYEEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFV 449
Query: 113 PNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQL 172
P+ +TY + + S+ L+ M G P+ + L+ + +E A
Sbjct: 450 PDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSW 509
Query: 173 WNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+++M G ++ L +L++A F M++ P+ V++
Sbjct: 510 FDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTY 560
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 85/208 (40%), Gaps = 36/208 (17%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G P++V+Y LID K + + + K+ ++M + +P+ ++Y +I G
Sbjct: 739 MEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGL 798
Query: 61 PDKARDVLKEMKE---------YGC------------------------YPDAAAYNAAI 87
D+A +L EMK Y C P A Y I
Sbjct: 799 LDEAHLLLDEMKHTHWPKHLQGYHCAVQGFSKKFIASLGLLEEMESHETVPIAPVYGMLI 858
Query: 88 RNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF---FRVFYWSNDLRSSWNLYCRMMGT 144
++ A RL A L E+VE S N T+ ++ + ++ + ++ LY M
Sbjct: 859 DSFSKAGRLETALELHKELVEVSSSLNMTSTGMYASLIQALCLASQVEEAFTLYTEMTRK 918
Query: 145 GCLPNTQSCMFLVKLCKRQEKVEIALQL 172
G +P+ + LVK K + ALQL
Sbjct: 919 GIVPDLIVFVSLVKGLIEVNKWDEALQL 946
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 82/233 (35%), Gaps = 34/233 (14%)
Query: 14 NCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKE 73
N L+ C+ ++A + + +++D P ++Y +++ L GQ + V KEM
Sbjct: 173 NVLVRRCCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSA 232
Query: 74 YGCYPDAAAYNAAIRNYCIAKRLRDA--------------------SGLMD-EMVEKGLS 112
G D + + C R DA SGLM+ + + +S
Sbjct: 233 SGFCMDRSTIGYFAQALCKVGRWADALNMLEKEDFNLDTVLCTQMISGLMEASLFNEAMS 292
Query: 113 -----------PNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCK 161
PN TY F + MM GC PN LV
Sbjct: 293 FLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYC 352
Query: 162 RQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEK 214
A +L+N M G + ++ +C +L AE L+++EK
Sbjct: 353 NAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAE--LLDLVEK 403
>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
Length = 841
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 123/257 (47%), Gaps = 4/257 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G P ++YNC+ID + K+ V A + +M +SP+V +YT++I G D A
Sbjct: 568 GFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLA 627
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
V+ EMK G D Y A I +C + +AS L+ E+ E GLSPN Y+
Sbjct: 628 LKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISG 687
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
F ++ ++ +L+ RM+ G + Q L+ ++ K+ A +L+ +M+ KG
Sbjct: 688 FRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPD 747
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLS 243
++ VL LC+ G+L A+K +M K P+ + I + N QEA + L
Sbjct: 748 LITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFR-LH 806
Query: 244 NKMALFGPSMIPKREEY 260
N+M ++P Y
Sbjct: 807 NEM--LDKGLVPDDTTY 821
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 111/241 (46%), Gaps = 1/241 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV+P +VSYN +I +C+ ++ A + +M ++ + P++I+Y+ ++ G G
Sbjct: 459 MVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGD 518
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A + M+ P N I C A R ++ + ++V++G P TYN
Sbjct: 519 TEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNC 578
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + S+ +Y M G PN + L+ + +++AL++ ++M KG
Sbjct: 579 IIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKG 638
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
+ V L D C G +V A + E+ E G P++V + I +L N + AL
Sbjct: 639 IELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAAL 698
Query: 240 Q 240
Sbjct: 699 H 699
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 113/226 (50%), Gaps = 1/226 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+ P+ V+Y +I+ CK+ ++KAY+I +M+++DISP V + S+I G
Sbjct: 355 MNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARS 414
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
P++A + E G + YN+ + C ++ +A + ++MV KG+ P+ +YN
Sbjct: 415 PEEASKLFDEAVACG-IANVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNN 473
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
D+ S+ ++ M+ G PN + L+ ++ E A L++ M +
Sbjct: 474 MILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGEN 533
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+++ + LC G+ E++ +++++G P+ +++ I
Sbjct: 534 IAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCI 579
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 123/284 (43%), Gaps = 39/284 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+KP++++Y+ L+D Y K E A+ + ++MR E+I+P + II GL G+
Sbjct: 494 MLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGR 553
Query: 61 PDKARDVLK-----------------------------------EMKEYGCYPDAAAYNA 85
+++D LK EM + G P+ Y
Sbjct: 554 TSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTN 613
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
I +C + + A +MDEM KG+ + T Y F D+ ++ L + G
Sbjct: 614 LINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVG 673
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
PN ++ ++ + +E AL L M+ +G + + L L GKL+ A
Sbjct: 674 LSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFAS 733
Query: 206 KSFLEMIEKGHKPSQVSFRRIKALM----ELANKQEALQNLSNK 245
+ + EM+ KG P +++ + + +L N Q+ L+++ K
Sbjct: 734 ELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRK 777
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 104/223 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++GV P++ +Y LI+ +CK ++ A K++++M+++ I DV Y ++I G G
Sbjct: 599 MCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGD 658
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +L E++E G P+ Y++ I + + + A L M+ +G+ + Y
Sbjct: 659 MVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTT 718
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
L + LY M+ G +P+ + L+ + ++E A ++ DM K
Sbjct: 719 LISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKC 778
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + + L G L EA + EM++KG P ++
Sbjct: 779 MTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDDTTY 821
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 95/223 (42%), Gaps = 36/223 (16%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G ++V L+ YCK ++ A ++ +KM + I P+ ++Y II G
Sbjct: 320 MLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGN 379
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA ++ +MK P N+ IR Y A+ +AS L DE V G++ N TYN
Sbjct: 380 MDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGIA-NVFTYNS 438
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
SW LCK + K+ A +W MV KG
Sbjct: 439 LL-----------SW-----------------------LCK-EGKMSEACSIWEKMVRKG 463
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + + C G + A F+EM+EKG KP+ +++
Sbjct: 464 VRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITY 506
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 103/225 (45%), Gaps = 1/225 (0%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
+ GV+ D +Y+ +I+ CK A ++ +MRD+ P + +T +IG G+
Sbjct: 251 KNKGVELDARAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKM 310
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
+A V EM G + ++ YC L A L D+M E G+ PN TY +
Sbjct: 311 LEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVI 370
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
+ ++ ++ +Y +M P + L++ + E A +L+++ V G
Sbjct: 371 IEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGI 430
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + + L LC GK+ EA + +M+ KG +PS VS+ +
Sbjct: 431 AN-VFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNM 474
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 81/157 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
++E+G+ P+ V Y+ +I + K + +E A + ++M +E I D+ YT++I GL G+
Sbjct: 669 LQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGK 728
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A ++ EM G PD Y+ I C +L +A ++++M K ++P YN
Sbjct: 729 LLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNT 788
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV 157
+ +L+ ++ L+ M+ G +P+ + LV
Sbjct: 789 LITGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDILV 825
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 97/225 (43%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
R + + D +N L++ Y K +++ A + ++DI P + + L
Sbjct: 146 RRLDFESDSRVFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELVKNNMI 205
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
+ARDV +M G D A + IR +L +A G E KG+ +A Y++
Sbjct: 206 REARDVYNKMASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIV 265
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
D ++ L M G +P+ ++ +C +Q K+ A+++ +M+ G
Sbjct: 266 IEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGK 325
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++V+ L C G L A + F +M E G P+ V++ I
Sbjct: 326 PMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVI 370
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 98/237 (41%), Gaps = 1/237 (0%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E + P + N + K+ + +A + KM + + D + + +I G+ +
Sbjct: 182 EKDIVPCLTVMNIFLSELVKNNMIREARDVYNKMASKGVKGDCATISVMIRASMREGKLE 241
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
+A +E K G DA AY+ I C A GL+ EM +KG P+ +
Sbjct: 242 EAEGWFREAKNKGVELDARAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVI 301
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
V + + + M+ G N L+K +Q ++ AL+L++ M E G
Sbjct: 302 GVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGIC 361
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEA 238
+ V+ + C G + +A + + +M K P+ + I+ ++ + +EA
Sbjct: 362 PNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEA 418
>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Brachypodium distachyon]
Length = 897
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 109/222 (49%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+KP+ Y LI + K+ + A + +E M ++ PD+ Y S+I GL VG+ ++A
Sbjct: 485 GLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEA 544
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ ++++ G PD Y+ I YC + L A L+ +M+ GL PNA TY
Sbjct: 545 EEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEG 604
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
++ SND ++ M+G+G P+ +++ R E +E+A + ++ + G
Sbjct: 605 YFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPD 664
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + L LC M + +A EM ++G +P V + +
Sbjct: 665 LHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNAL 706
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 98/226 (43%), Gaps = 35/226 (15%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ PD+ +Y+ ++ +CK R + A K+ E+MR D + + ++Y +I GL G
Sbjct: 236 MEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGA 295
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A +EM +YG PDA Y A + C RL++A L+DEM GL PN Y
Sbjct: 296 VEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYAT 355
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F ++++ M+ G PN
Sbjct: 356 LVDGFMKEGKAAEAFDILNEMISAGVQPNK------------------------------ 385
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ D L LC +G+L A K EMI+ GH+P ++ +
Sbjct: 386 -----IMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPL 426
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 112/251 (44%), Gaps = 35/251 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGG------ 54
+++ G+ PD +Y+ LI YCK R +EKA +++++M + + P+ +YT ++ G
Sbjct: 551 VQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSND 610
Query: 55 -----------LGLVGQPDK------------------ARDVLKEMKEYGCYPDAAAYNA 85
LG +PD A VL E+++ G PD Y++
Sbjct: 611 HEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSS 670
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
I C + A GL+DEM ++GL P YN F S D+ + N++ ++ G
Sbjct: 671 LISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKG 730
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
LPN + L+ + + A L+ DM+++G V +VL D L +A
Sbjct: 731 LLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQAL 790
Query: 206 KSFLEMIEKGH 216
EM +G+
Sbjct: 791 FLTEEMFNRGY 801
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 117/266 (43%), Gaps = 16/266 (6%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G KPD Y +I + +E A+ ++ ++ + PD+ Y+S+I GL + +KA
Sbjct: 625 GDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKA 684
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+L EM + G P YNA I +C + + A + D ++ KGL PN TY
Sbjct: 685 VGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDG 744
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ D+ +++LY M+ G P+ L C +E AL L +M +G+
Sbjct: 745 NCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYAHV 804
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI--------------KALM 230
L S L C G+L E EK M+++ P+ + + +
Sbjct: 805 SLFS-TLVRGFCKRGRLQETEKLLHVMMDREIVPNAQTVENVITEFGKAGKLCEAHRVFA 863
Query: 231 ELANKQEALQNLSNKMALFGPSMIPK 256
EL K+ A Q+ +++ +L MI K
Sbjct: 864 ELQQKK-ASQSSTDRFSLLFTDMINK 888
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 121/259 (46%), Gaps = 37/259 (14%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ PD +Y L++ CK ++++A ++++M + P+V+ Y +++ G G+
Sbjct: 306 MVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGK 365
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A D+L EM G P+ Y+ IR C +L AS L++EM++ G P+ TY+
Sbjct: 366 AAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHP 425
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+ + D ++ L M +G LPN + ++ LC+ E E A L +M+ +
Sbjct: 426 LMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKE-AGNLLEEMISE 484
Query: 180 GF-----------------GSYILV---------SDVLFDLLC---------DMGKLVEA 204
G G L ++VL DL C +G++ EA
Sbjct: 485 GLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEA 544
Query: 205 EKSFLEMIEKGHKPSQVSF 223
E+ + ++ ++G P + ++
Sbjct: 545 EEYYAQVQKRGLVPDEFTY 563
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 103/246 (41%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV+P+ + Y+ LI CK Q+ +A K++ +M PD +Y ++ G
Sbjct: 376 MISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYD 435
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A ++L EM+ G P+A Y I C ++A L++EM+ +GL PNA Y
Sbjct: 436 KDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAP 495
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + M LP+ L+K ++E A + + + ++G
Sbjct: 496 LIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRG 555
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
L C L +A++ +M+ G KP+ ++ + +N E +
Sbjct: 556 LVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVS 615
Query: 241 NLSNKM 246
++ M
Sbjct: 616 SILQSM 621
Score = 44.3 bits (103), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 70/186 (37%), Gaps = 1/186 (0%)
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
G A V+ M + G P N +++ A + L M G+ P+ TY
Sbjct: 189 GSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKGFMEGAGIPPDVYTY 248
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
+ F + D ++ ++ M C N + ++ R VE A +MV+
Sbjct: 249 STFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVD 308
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQE 237
G L + LC G+L EA+ EM G KP+ V + + M+ E
Sbjct: 309 YGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAE 368
Query: 238 ALQNLS 243
A L+
Sbjct: 369 AFDILN 374
>gi|242047602|ref|XP_002461547.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
gi|241924924|gb|EER98068.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
Length = 696
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 123/251 (49%), Gaps = 10/251 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ P++V+ N +ID CK + ++KA ++++M DE I P+ +Y S+I G GQ
Sbjct: 278 MLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQ 337
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A +LKEM G P+ Y+ I C + +A + + M++ G PNA+TY
Sbjct: 338 WTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGS 397
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKL-----CKRQEKVEIALQLWND 175
+ +L N+ M+ G P +F +++ C R ++ + +N
Sbjct: 398 LLHGYATEGNLVDMNNVKDLMVQNGMRPGRH--VFNIEIYAYCKCGRLDEASLT---FNK 452
Query: 176 MVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANK 235
M ++GF I+ + D LC +G+L +A F +MI+ G P ++F + L K
Sbjct: 453 MQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGK 512
Query: 236 QEALQNLSNKM 246
E + L +M
Sbjct: 513 WEKAEELFYEM 523
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 105/226 (46%), Gaps = 4/226 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDE--DISPDVISYTSIIGGLGLV 58
M E+G PD+ SY L+ C +++ E+A +++ M ++ + P+V+SYT++I G
Sbjct: 206 MPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTTVIHGFFKE 265
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
G KA + +M ++G P+ N+ I C + + A ++ +M+++ + PN TTY
Sbjct: 266 GDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTY 325
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMV 177
N + S + + M G PN + L+ LCK E A +++N M+
Sbjct: 326 NSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAE-AREIFNSMI 384
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ G L G LV+ M++ G +P + F
Sbjct: 385 QSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVF 430
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 101/222 (45%), Gaps = 16/222 (7%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G PDIV+Y +ID CK +++ A +M D+ +SPD+I++ ++I G L G+
Sbjct: 453 MQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGK 512
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA ++ EM + G P+ +N+ I ++ +A L D M G PN +YN
Sbjct: 513 WEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNT 572
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++ + ++ L M+ G P + L+ + MV G
Sbjct: 573 MIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLL----------------DGMVSMG 616
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
++ L D C+ G++ + F EM+ K K ++
Sbjct: 617 LKPDVVTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTIT 658
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 110/250 (44%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G +P++V+Y+ LID CK +A +I M P+ +Y S++ G G
Sbjct: 348 MSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGN 407
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+V M + G P +N I YC RL +AS ++M ++G P+ Y
Sbjct: 408 LVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTT 467
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
L + + +C+M+ G P+ + L+ K E A +L+ +M+++G
Sbjct: 468 VIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRG 527
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ + + D L GK+ EA K F M G KP+ VS+ + +A + +
Sbjct: 528 IPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVM 587
Query: 241 NLSNKMALFG 250
L + M L G
Sbjct: 588 KLLDDMLLIG 597
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 120/299 (40%), Gaps = 40/299 (13%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
V PDI ++ LI C + + + ++ + +++T ++ L + A
Sbjct: 140 VAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRTLCAEKRTSDAM 199
Query: 66 D-VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKG--LSPNATTYNLFF 122
+ VL+ M E GC PD +Y ++ C K+ +A+ L+ M E G PN +Y
Sbjct: 200 NIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTTVI 259
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQ--EKVEIALQ-------- 171
F+ D+ ++ L+C+M+ G PN +C ++ LCK Q +K E LQ
Sbjct: 260 HGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIM 319
Query: 172 ------------------------LWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKS 207
+ +M G ++ +L D LC G EA +
Sbjct: 320 PNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREI 379
Query: 208 FLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFGPSMIPKREEYLAEMSA 266
F MI+ G KP+ ++ + + N+ + M G M P R + E+ A
Sbjct: 380 FNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNG--MRPGRHVFNIEIYA 436
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 61/142 (42%), Gaps = 19/142 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGG---LGL 57
M + G+ P++ ++N +ID K+ +V +A K+ + M P+V+SY ++I G G
Sbjct: 523 MMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGE 582
Query: 58 VGQPDKARD----------------VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASG 101
VG+ K D +L M G PD I + C R+ D
Sbjct: 583 VGEVMKLLDDMLLIGLKPTAVTFNTLLDGMVSMGLKPDVVTCKTLIDSCCEDGRIEDILT 642
Query: 102 LMDEMVEKGLSPNATTYNLFFR 123
L EM+ K + T N+ R
Sbjct: 643 LFREMLGKADKTDTITENIKLR 664
>gi|357499971|ref|XP_003620274.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495289|gb|AES76492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 498
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 113/221 (51%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
V+P++V YN +ID CK + V +A+ + +M E ISPDV++Y+++I G +VG+ A
Sbjct: 174 VQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAI 233
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
D+ +M PD +N + +C ++++ + M+++G+ PN TY +
Sbjct: 234 DLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGY 293
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ + +++ M G P+TQS ++ + +KV+ A+ L+ M K +
Sbjct: 294 CLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNV 353
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ L D LC GK+ A K EM ++G P +++ I
Sbjct: 354 VTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSI 394
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 110/240 (45%), Gaps = 10/240 (4%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+KPD+ ++N L+D +CKD ++++ + M + I P+V++Y S++ G LV Q +KA
Sbjct: 244 IKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAN 303
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+ M + G PD +YN I +C K++ +A L +M K + PN TY
Sbjct: 304 SIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGL 363
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCK-RQEKVEIAL------QLWNDMV 177
S + + L M G P+ + L LCK Q IAL Q++ D+
Sbjct: 364 CKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLF 423
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQE 237
KG+ + V+ C G EA +M + G P ++ I ++ L K E
Sbjct: 424 VKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTYEII--ILSLFKKDE 481
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 98/196 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ PD+V+Y+ LI + +++ A + KM E+I PDV ++ ++ G G+
Sbjct: 204 MVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGK 263
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ + V M + G P+ Y + + YC+ K++ A+ + + M + G++P+ +YN+
Sbjct: 264 MKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNI 323
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + + NL+ +M +PN + L+ + K+ AL+L ++M ++G
Sbjct: 324 MINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRG 383
Query: 181 FGSYILVSDVLFDLLC 196
I+ + D LC
Sbjct: 384 VPPDIITYSSILDALC 399
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 105/217 (48%), Gaps = 2/217 (0%)
Query: 11 VSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKE 70
VSY LI+ CK Q A +++ ++ + + P+V+ Y +II + V ++A D+ E
Sbjct: 144 VSYGTLINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSE 203
Query: 71 MKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSND 130
M G PD Y+A I + I +L+DA L ++M+ + + P+ T+N+ F
Sbjct: 204 MVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGK 263
Query: 131 LRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSD 189
++ ++ MM G PN + C + C ++ V A ++N M + G +
Sbjct: 264 MKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQ-VNKANSIFNTMAQGGVNPDTQSYN 322
Query: 190 VLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ + C + K+ EA F +M K P+ V++ +
Sbjct: 323 IMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSL 359
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 76/150 (50%), Gaps = 8/150 (5%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ P++V+Y LID CK ++ A K+V++M D + PD+I+Y+SI+ L Q DKA
Sbjct: 349 IIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAI 408
Query: 66 DVLKEMKEY--------GCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
+L ++K+ G D AY I+ +C+ +A L+ +M + G P+A T
Sbjct: 409 ALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKT 468
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCL 147
Y + + ++ + L M+ G L
Sbjct: 469 YEIIILSLFKKDENDMAEKLLREMIARGLL 498
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 111/273 (40%), Gaps = 50/273 (18%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGL--- 57
M G+ ++V+ N LI+ + + Q ++ + + + P+VI+ T++I GL L
Sbjct: 86 MELKGIASNLVTLNILINCFSQLGQNPLSFSVFANILKKGYDPNVITLTTLIKGLCLKVS 145
Query: 58 ----------VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMV 107
VGQ A +L+ + P+ YN I + C K + +A L EMV
Sbjct: 146 YGTLINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMV 205
Query: 108 EKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVE 167
+G+SP+ TY+ F+ L+
Sbjct: 206 SEGISPDVVTYSALISGFFIVGKLKD---------------------------------- 231
Query: 168 IALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIK 227
A+ L+N M+ + + ++L D C GK+ E + F M+++G KP+ V++ +
Sbjct: 232 -AIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLM 290
Query: 228 ALMELANKQEALQNLSNKMALFGPSMIPKREEY 260
L + ++ N MA G + P + Y
Sbjct: 291 DGYCLVKQVNKANSIFNTMAQGGVN--PDTQSY 321
Score = 40.8 bits (94), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 70/166 (42%), Gaps = 15/166 (9%)
Query: 97 RDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFL 156
A L +M KG++ N T N+ F S++++ ++ G PN + L
Sbjct: 77 HTAISLHRQMELKGIASNLVTLNILINCFSQLGQNPLSFSVFANILKKGYDPNVITLTTL 136
Query: 157 VK--------------LCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLV 202
+K LCK + ALQL + K +++ + + D +C + +
Sbjct: 137 IKGLCLKVSYGTLINGLCKVGQ-ARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVN 195
Query: 203 EAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMAL 248
EA + EM+ +G P V++ + + + K + +L NKM L
Sbjct: 196 EAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMIL 241
>gi|15222150|ref|NP_172763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75200670|sp|Q9SAD9.1|PPR40_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g13040, mitochondrial; Flags: Precursor
gi|4850387|gb|AAD31057.1|AC007357_6 F3F19.6 [Arabidopsis thaliana]
gi|332190841|gb|AEE28962.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 517
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 100/190 (52%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
D+VSY+ LI+ +C+ KAY++ E+MR + + +V++YTS+I G A+ +L
Sbjct: 324 DVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLL 383
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
+M E G PD Y + + C + + A G+ ++M+E ++P+A +YN S
Sbjct: 384 DQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRS 443
Query: 129 NDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVS 188
+ + L+ M G C P+ + F++ R +K+ A ++W+ M++KGF VS
Sbjct: 444 GRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVS 503
Query: 189 DVLFDLLCDM 198
D L C M
Sbjct: 504 DTLIKASCSM 513
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 118/248 (47%), Gaps = 4/248 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++G +PD+V+YN L++ Y + +++A ++ +M I D SY ++ V
Sbjct: 246 MSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSH 305
Query: 61 PDKARD-VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
PDK + ++KEM+ G + D +Y+ I +C A R A L +EM +KG+ N TY
Sbjct: 306 PDKCYNFMVKEMEPRG-FCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYT 364
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPN-TQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
+ F + + L +M G P+ L LCK V+ A ++NDM+E
Sbjct: 365 SLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCK-SGNVDKAYGVFNDMIE 423
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEA 238
+ + L LC G++ EA K F +M K P +++F+ I + K A
Sbjct: 424 HEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSA 483
Query: 239 LQNLSNKM 246
+ ++M
Sbjct: 484 AYKVWDQM 491
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 113/277 (40%), Gaps = 37/277 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIV-EKMRDEDISPDVISYTSIIGGLGLVG 59
M GV PD + L+ C R+V+ AY++V E+++ + + Y ++I G G
Sbjct: 175 MIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAG 234
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ +KA + M + GC PD YN + Y L+ A G+M EMV G+ +A +YN
Sbjct: 235 RIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYN 294
Query: 120 LFFR-----------------------------------VFYWSNDLRSSWNLYCRMMGT 144
+ F +++ R ++ L+ M
Sbjct: 295 QLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQK 354
Query: 145 GCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEA 204
G + N + L+K R+ +A +L + M E G + + D LC G + +A
Sbjct: 355 GMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKA 414
Query: 205 EKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQ 240
F +MIE P +S+ I L EA++
Sbjct: 415 YGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIK 451
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 62/112 (55%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E+G+ PD + Y ++D CK V+KAY + M + +I+PD ISY S+I GL G+
Sbjct: 386 MTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGR 445
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLS 112
+A + ++MK C PD + I K+L A + D+M++KG +
Sbjct: 446 VTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFT 497
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 105/229 (45%), Gaps = 11/229 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR + YN I V ++ + E A I M+ S +Y+ I GL V +
Sbjct: 35 MRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFTYSRFISGLCKVKK 94
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D +L +M+ G PD A+N + C ++ A MV++G P+ +Y +
Sbjct: 95 FDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTI 154
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + + ++ M+ +G P+ ++C LV KV++A ++ + E+
Sbjct: 155 LINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEM---VAEEI 211
Query: 181 FGSYILVSDVLFDLL----CDMGKLVEAE--KSFLEMIEKGHKPSQVSF 223
+ + +S V+++ L C G++ +AE KS++ I G +P V++
Sbjct: 212 KSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKI--GCEPDLVTY 258
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E + PD +SYN LI C+ +V +A K+ E M+ ++ PD +++ IIGGL +
Sbjct: 421 MIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKK 480
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYC 91
A V +M + G D + I+ C
Sbjct: 481 LSAAYKVWDQMMDKGFTLDRDVSDTLIKASC 511
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 68/170 (40%)
Query: 11 VSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKE 70
++Y I K ++ A ++ ++MR Y IG L + + A + +
Sbjct: 10 LAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWD 69
Query: 71 MKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSND 130
MK G Y+ I C K+ L+ +M G P+ +N++ + N
Sbjct: 70 MKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENK 129
Query: 131 LRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + M+ G P+ S L+ R KV A+++WN M+ G
Sbjct: 130 VGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSG 179
>gi|297837133|ref|XP_002886448.1| hypothetical protein ARALYDRAFT_475066 [Arabidopsis lyrata subsp.
lyrata]
gi|297332289|gb|EFH62707.1| hypothetical protein ARALYDRAFT_475066 [Arabidopsis lyrata subsp.
lyrata]
Length = 332
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 115/246 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G +P+ V+Y +++ CK + A ++ KM + I DV+ YT+II L G
Sbjct: 36 MVENGHQPNEVTYGTIVNGMCKMGDTDSALNLLRKMDESHIKADVVIYTAIIDRLCKDGH 95
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA+++ EM + G +P+ YN I C + DA L+ +M+E + P+ T+N
Sbjct: 96 HSKAQNLFTEMHDKGIFPNVLTYNCMIDGCCSYGKWTDAEQLLRDMIESNVDPDVVTFNA 155
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + + LY M+G P+T + L+ + +++ A +++ MV KG
Sbjct: 156 LINAFVKEGKISEAEELYREMLGRNIFPDTITYNSLIDGFCKHSRLDDAKHIFDLMVSKG 215
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
++ + L C ++ + K EM+ +G P VS+ + A A Q
Sbjct: 216 GSPNVITINTLIGGCCRAKRVDDGIKLLHEMLRRGLVPDSVSYNTLIHGFCQAGDLNAAQ 275
Query: 241 NLSNKM 246
+L +M
Sbjct: 276 DLFQEM 281
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 123/260 (47%), Gaps = 10/260 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E +K D+V Y +ID CKD KA + +M D+ I P+V++Y +I G G+
Sbjct: 71 MDESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTYNCMIDGCCSYGK 130
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +L++M E PD +NA I + ++ +A L EM+ + + P+ TYN
Sbjct: 131 WTDAEQLLRDMIESNVDPDVVTFNALINAFVKEGKISEAEELYREMLGRNIFPDTITYNS 190
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + L + +++ M+ G PN + L+ C R ++V+ ++L ++M+ +G
Sbjct: 191 LIDGFCKHSRLDDAKHIFDLMVSKGGSPNVITINTLIGGCCRAKRVDDGIKLLHEMLRRG 250
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ + L C G L A+ F EMI SQV + I L+ ++ E +
Sbjct: 251 LVPDSVSYNTLIHGFCQAGDLNAAQDLFQEMI------SQVRWILILLLITSSSSMECAR 304
Query: 241 NL----SNKMALFGPSMIPK 256
+ ++ PSM+ K
Sbjct: 305 VIRWTKHGIWSIVSPSMVWK 324
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 107/226 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G + D+V++N L++ C++ +V +A +V++M + P+ ++Y +I+ G+ +G
Sbjct: 1 MVEKGCQHDVVAFNTLMNGLCREGRVLEAEALVDRMVENGHQPNEVTYGTIVNGMCKMGD 60
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A ++L++M E D Y A I C A L EM +KG+ PN TYN
Sbjct: 61 TDSALNLLRKMDESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTYNC 120
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L M+ + P+ + L+ ++ K+ A +L+ +M+ +
Sbjct: 121 MIDGCCSYGKWTDAEQLLRDMIESNVDPDVVTFNALINAFVKEGKISEAEELYREMLGRN 180
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + L D C +L +A+ F M+ KG P+ ++ +
Sbjct: 181 IFPDTITYNSLIDGFCKHSRLDDAKHIFDLMVSKGGSPNVITINTL 226
Score = 43.5 bits (101), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 176 MVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI-KALMELAN 234
MVEKG ++ + L + LC G+++EAE M+E GH+P++V++ I + ++ +
Sbjct: 1 MVEKGCQHDVVAFNTLMNGLCREGRVLEAEALVDRMVENGHQPNEVTYGTIVNGMCKMGD 60
Query: 235 KQEALQNLSNKM 246
AL NL KM
Sbjct: 61 TDSAL-NLLRKM 71
>gi|110289336|gb|ABG66168.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
Length = 484
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 110/226 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ P++V+Y+ +I CK + ++KA +++ M + P+ +Y SI+ G GQ
Sbjct: 225 MLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQ 284
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
P +A LK+M G PD YN+ + C R +A + D M ++GL P TTY
Sbjct: 285 PKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGT 344
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + L L M+ G PN L+ +Q KV+ A+ +++ M ++G
Sbjct: 345 LLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQG 404
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + +LC G++ +A + F +MI++ P + + +
Sbjct: 405 LNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSL 450
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 105/226 (46%), Gaps = 4/226 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDE--DISPDVISYTSIIGGLGLV 58
M ++G P++ SYN L+ C + + ++A ++++ M D+ D PDV+SYT++I G
Sbjct: 153 MTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKE 212
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
G DKA EM + G P+ Y++ I C A+ + A ++ MV+ G+ PN TY
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMV 177
N + S + + +M G P+ + L+ LCK E A ++++ M
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTE-ARKMFDSMT 331
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++G I L G LVE M+ G P+ F
Sbjct: 332 KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVF 377
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 103/210 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV P+ +YN ++ YC Q ++A ++KM + + PDV++Y S++ L G+
Sbjct: 260 MVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGR 319
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR + M + G P+ Y ++ Y L + GL+D MV G+ PN +++
Sbjct: 320 CTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSI 379
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + ++ +M G P+T + ++ + + +VE A++ + M+++
Sbjct: 380 LICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDER 439
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLE 210
+V + L LC K +A+ FL+
Sbjct: 440 LSPGNIVYNSLIHSLCIFDKWDKAKDYFLK 469
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 108/257 (42%), Gaps = 40/257 (15%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
V P++ +Y LI C +++ + + + + D I++T ++ GL + A
Sbjct: 87 VTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAM 146
Query: 66 D-VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKG--LSPNATTYNLFF 122
D VL+ M + GC P+ +YN ++ C R ++A L+ M + G P+ +Y
Sbjct: 147 DIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVI 206
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
F+ DL ++ Y M+ G LPN + + LCK Q ++ A+++ MV+ G
Sbjct: 207 NGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQA-MDKAMEVLTSMVKNGV 265
Query: 182 ----GSY-------------------------------ILVSDVLFDLLCDMGKLVEAEK 206
+Y ++ + L D LC G+ EA K
Sbjct: 266 MPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARK 325
Query: 207 SFLEMIEKGHKPSQVSF 223
F M ++G KP ++
Sbjct: 326 MFDSMTKRGLKPEITTY 342
>gi|15221540|ref|NP_172145.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205637|sp|Q9SHK2.1|PPR17_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g06580
gi|6692678|gb|AAF24812.1|AC007592_5 F12K11.8 [Arabidopsis thaliana]
gi|332189887|gb|AEE28008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 500
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 113/223 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M MG+ PD+++++ LIDVY K+ Q+ +A K +M ++P++++Y S+I GL + G
Sbjct: 245 MMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGL 304
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A+ VL + G +P+A YN I YC AKR+ D ++ M G+ + TYN
Sbjct: 305 LDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNT 364
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++ + + ++ + RM+ G P+ + L+ K+ AL D+ +
Sbjct: 365 LYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSK 424
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I+ +++ LC K+ +A F + KG P +++
Sbjct: 425 TVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITY 467
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 99/204 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++MG++PD+V+YN LI + +I+ M ISPDVI+++++I G GQ
Sbjct: 210 MKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQ 269
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A+ EM + P+ YN+ I CI L +A +++ +V KG PNA TYN
Sbjct: 270 LLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNT 329
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + + C M G +T + L + + K A ++ MV G
Sbjct: 330 LINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCG 389
Query: 181 FGSYILVSDVLFDLLCDMGKLVEA 204
+ ++L D LCD GK+ +A
Sbjct: 390 VHPDMYTFNILLDGLCDHGKIGKA 413
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 107/223 (47%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
+G+ D+ S+ LID +C+ ++ A + KM P ++++ S++ G V + +
Sbjct: 108 LGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYE 167
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
A ++ ++ G P+ YN I + C ++ A ++ M + G+ P+ TYN
Sbjct: 168 AMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLIT 227
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
+ S S + MM G P+ + L+ + ++ ++ A + +N+M+++
Sbjct: 228 RLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNP 287
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
I+ + L + LC G L EA+K ++ KG P+ V++ +
Sbjct: 288 NIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTL 330
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 80/172 (46%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G P+ V+YN LI+ YCK ++V+ KI+ M + + D +Y ++ G G+ A
Sbjct: 319 GFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAA 378
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
VL M G +PD +N + C ++ A ++++ + TYN+ +
Sbjct: 379 EKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKG 438
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDM 176
++ + +W L+C + G P+ + + ++ +R+ A +L+ M
Sbjct: 439 LCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKM 490
>gi|356540343|ref|XP_003538649.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Glycine max]
Length = 543
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 123/245 (50%), Gaps = 6/245 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E+G +PD+ SY I+ YC +R K +++E+MR+ P+ ++YT+++ LG GQ
Sbjct: 289 MKELGFEPDVFSYTSFIEAYCHERDFRKVDQVLEEMRENGCPPNAVTYTTVMLHLGKAGQ 348
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA +V ++MK GC D Y+ I A RL+DA + ++M ++G+ + TYN
Sbjct: 349 LSKALEVYEKMKCDGCVADTPVYSCMIFILGKAGRLKDACDVFEDMPKQGVVRDVVTYNT 408
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ L M C PN + L+K+C +++++++ L + M +
Sbjct: 409 MISTACAHSREETALRLLKEMEDGSCKPNVGTYHPLLKMCCKKKRMKVLKFLLDHMFKND 468
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ +L + LC GK+ +A EM+ KG P + L LA + E+L
Sbjct: 469 ISPDLATYSLLVNALCKTGKVADAYSFLEEMVLKGFTP------KPSTLKGLAGELESLS 522
Query: 241 NLSNK 245
L K
Sbjct: 523 MLEEK 527
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 104/228 (45%), Gaps = 5/228 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV D + N LID K VE A+K+V + + I S+ ++ G +
Sbjct: 220 MDKFGVNKDTAALNVLIDALVKGDSVEHAHKVVLEFKGL-IPLSSHSFNVLMHGWCRARK 278
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D AR +++MKE G PD +Y + I YC + R +++EM E G PNA TY
Sbjct: 279 FDNARKAMEDMKELGFEPDVFSYTSFIEAYCHERDFRKVDQVLEEMRENGCPPNAVTYTT 338
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQ--SCMFLVKLCKRQEKVEIALQLWNDMVE 178
+ L + +Y +M GC+ +T SCM + + +++ A ++ DM +
Sbjct: 339 VMLHLGKAGQLSKALEVYEKMKCDGCVADTPVYSCMIFI--LGKAGRLKDACDVFEDMPK 396
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+G ++ + + C + A + EM + KP+ ++ +
Sbjct: 397 QGVVRDVVTYNTMISTACAHSREETALRLLKEMEDGSCKPNVGTYHPL 444
>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
Length = 609
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 110/247 (44%), Gaps = 3/247 (1%)
Query: 1 MREMGV-KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVG 59
MRE G KPD+V+Y LID +CK +EKA K++ M P+V++Y+S++ GL G
Sbjct: 179 MREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAG 238
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
D+A D+ + M GC P+ Y I C A ++ A LMDEM + +YN
Sbjct: 239 DLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYN 298
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVE 178
+ + + L+ M CLP+ + LV+ C E L N
Sbjct: 299 ALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTA 358
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQE 237
G ++ ++ + VEA + EMI + P+ V++ I L +
Sbjct: 359 AGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNH 418
Query: 238 ALQNLSN 244
A++ L N
Sbjct: 419 AMEVLKN 425
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 121/265 (45%), Gaps = 42/265 (15%)
Query: 1 MREM----GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLG 56
+REM G+ PD+V+Y ++D C+D ++++A ++V +M+ + + PD +++++I G
Sbjct: 68 LREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWC 127
Query: 57 LVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEM---------- 106
+ D+A + KE+ C DA + +A I C +R+ +A L EM
Sbjct: 128 NARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKP 187
Query: 107 -----------------VEKGLS-----------PNATTYNLFFRVFYWSNDLRSSWNLY 138
+EK + PN TY+ + DL + +L+
Sbjct: 188 DVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLF 247
Query: 139 CRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDM 198
RM GC+PN + L+ KV+ A L ++M + + + L D C +
Sbjct: 248 RRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRL 307
Query: 199 GKLVEAEKSFLEMIEKGHKPSQVSF 223
G++ EA++ F EM K P ++++
Sbjct: 308 GRIEEAKQLFKEMAAKSCLPDRITY 332
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 119/229 (51%), Gaps = 8/229 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRD-EDISPDVISYTSIIGGLGLVG 59
MRE V P+ +YN +++ CK R KAY+++++MRD + ++PD+++Y+++I G G
Sbjct: 1 MREF-VAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQG 59
Query: 60 QPDKARDVLKEM-KEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
+ D+A ++L+EM G PD Y + + C ++ A ++ EM KG+ P+ T+
Sbjct: 60 EMDRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTF 119
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGC-LPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
+ + + + + LY ++ + C L S + LC R+ ++ A +L+ +M
Sbjct: 120 SALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLC-RERRIGEAYELFQEME 178
Query: 178 EKGFGSY---ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ G++ ++ L D C G L +A K M + P+ V++
Sbjct: 179 MREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTY 227
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 90/176 (51%), Gaps = 4/176 (2%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ PD+V+Y+ ++ Y + ++ +A + +++M +++P+ ++Y+S+I GL G+ + A
Sbjct: 360 GIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHA 419
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+VLK + + PD Y I C R +A L++EMV K + P+ T+N
Sbjct: 420 MEVLKNVDK----PDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGA 475
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
D+ +W L M G P + L++ R ++EIA +L+ M K
Sbjct: 476 LCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKA 531
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 104/225 (46%), Gaps = 6/225 (2%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMR---DEDISPDVISYTSIIGGLGLVGQPDKAR 65
D VS + LI C++R++ +AY++ ++M D PDV++YT++I G G +KA
Sbjct: 150 DAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAM 209
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+L M+ C P+ Y++ + C A L A L M KG PN TY
Sbjct: 210 KMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGL 269
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
++ + ++ L M T C +T S L+ R ++E A QL+ +M K
Sbjct: 270 CAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDR 329
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEK--GHKPSQVSFRRIKA 228
+ L C+ +L EA + LE ++ G P V++ + A
Sbjct: 330 ITYTCLVRGFCNASRLEEA-RFLLENMKTAAGIDPDVVTYSIVVA 373
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 81/182 (44%), Gaps = 7/182 (3%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
KPD+V+Y +I+ C + E+A ++E+M ++ + P V ++ S+IG L +G D+A
Sbjct: 428 KPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWK 487
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNAT-------TYN 119
+L M +G P Y + + R+ A L + M K ++ ++
Sbjct: 488 LLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQAFS 547
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
R + ++ + + + C P + C+ +V R + E A +L N + +
Sbjct: 548 ALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKV 607
Query: 180 GF 181
G
Sbjct: 608 GL 609
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 62/119 (52%), Gaps = 9/119 (7%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDE--------DISPDVISYTSII 52
M G++P +V+Y L++ + + ++E AY++ E MR + ++ P+ +++++I
Sbjct: 492 MAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQ-AFSALI 550
Query: 53 GGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGL 111
GL + DKA V++E++ C P A + A R +A L++ + + GL
Sbjct: 551 RGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVGL 609
>gi|302141714|emb|CBI18917.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 129/256 (50%), Gaps = 6/256 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G++P++ +Y+ +ID C+ Q+ +A+ + +M D P+ I++ +++ G+
Sbjct: 241 MKMAGIQPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGR 300
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+K V +MK GC PDA YN I ++C L +A +++ V+KG + NA+++N
Sbjct: 301 TEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKILNS-VKKGCNLNASSFNP 359
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F D+ S+ ++ +M C PNT + L+++ ++ ++ L+L +M E
Sbjct: 360 IFGCISKLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMFADKKSTDMVLKLRKEMDENE 419
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMI-EKGHKPS----QVSFRRIKALMELANK 235
VL C +G A F EMI EK +PS ++ ++++ +L
Sbjct: 420 IEPNANTYRVLISTFCGIGHWNNAYSFFKEMIEEKCLRPSLPVYEMVLQQLRKAGQLKKH 479
Query: 236 QEALQNLSNKMALFGP 251
+E ++ + N+ + P
Sbjct: 480 EELVEKMVNRGFVTRP 495
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 99/226 (43%), Gaps = 4/226 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+ E G P+ Y +ID+ K +A +M D PD I+++ +I L +
Sbjct: 139 LEEFGHSPE--PYMEMIDLAGKAGLAAEAVHAFNRMEDYGCKPDKIAFSVVISSLSKKRR 196
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A+ +K+ PD Y + + +C A + +A + EM G+ PN TY++
Sbjct: 197 AIEAQSFFDSLKDR-FEPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIQPNVYTYSI 255
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
S + + +++ M+ GC PN + L+++ + + E LQ++N M G
Sbjct: 256 VIDALCRSGQITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLG 315
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + L + C L EA K L ++KG + SF I
Sbjct: 316 CPPDAITYNFLIESHCRDDNLEEAVK-ILNSVKKGCNLNASSFNPI 360
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/203 (19%), Positives = 74/203 (36%), Gaps = 36/203 (17%)
Query: 48 YTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMV 107
Y +I G G +A M++YGC PD A++ I + +R +A D +
Sbjct: 149 YMEMIDLAGKAGLAAEAVHAFNRMEDYGCKPDKIAFSVVISSLSKKRRAIEAQSFFDSLK 208
Query: 108 EKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVE 167
++ P+ Y + + ++ + ++ M G PN
Sbjct: 209 DR-FEPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIQPN------------------ 249
Query: 168 IALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIK 227
+ ++ D LC G++ A F EMI+ G P+ ++F +
Sbjct: 250 -----------------VYTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFNNLM 292
Query: 228 ALMELANKQEALQNLSNKMALFG 250
+ A + E + + N+M G
Sbjct: 293 RVHVKAGRTEKVLQVYNQMKRLG 315
>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
Length = 895
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 109/222 (49%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+KP+ Y LI + K+ + A + +EKM ++ PD+ Y S+I GL VG+ ++A
Sbjct: 483 GLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEA 542
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ ++++ G PD Y+ I YC L A L+ +M+ GL PNA TY
Sbjct: 543 EEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEG 602
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
++ SND ++ M+G+G P+ +++ R E +E+A + ++ + G
Sbjct: 603 YFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPD 662
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + L LC + + +A EM ++G +P V + +
Sbjct: 663 LHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNAL 704
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 109/254 (42%), Gaps = 35/254 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ PD+ +Y+ I+ +CK R + A K+ E+MR D + + ++Y +I GL G
Sbjct: 234 MEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGA 293
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A +EM +YG PDA Y A + C RL++A L+DEM GL PN Y
Sbjct: 294 VEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGT 353
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCK------------------ 161
F ++++ M+ G PN L++ LCK
Sbjct: 354 LVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVG 413
Query: 162 ----------------RQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
+Q + A +L N+M G + ++ + LC G+ EA
Sbjct: 414 LRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAG 473
Query: 206 KSFLEMIEKGHKPS 219
EMI +G KP+
Sbjct: 474 NLLEEMISEGLKPN 487
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 119/266 (44%), Gaps = 16/266 (6%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G KPD Y +I + +E A+ ++ ++ + PD+ Y+S+I GL + +KA
Sbjct: 623 GDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKA 682
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+L EM + G P YNA I +C + + A + D ++ KGL PN TY
Sbjct: 683 VGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDG 742
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ D+ +++LY M+ G P+ L C +E AL L +M +G+ +
Sbjct: 743 NCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYANV 802
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI--------------KALM 230
L + L C GKL E EK M+++ P+ + ++ +
Sbjct: 803 SLF-NTLVHGFCKRGKLQETEKLLHVMMDREIVPNAQTVEKVVSEFGKAGKLGEAHRVFA 861
Query: 231 ELANKQEALQNLSNKMALFGPSMIPK 256
EL K+ A Q+ +++ +L MI K
Sbjct: 862 ELQQKK-ASQSATDRFSLLFTDMINK 886
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 108/219 (49%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+KP+IV Y L+D + K+ + +A+ I+++M + P+ I Y ++I GL +GQ +A
Sbjct: 343 GLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRA 402
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+LKEM + G PD YN ++ + A L++EM G+ PN +Y +
Sbjct: 403 SKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMING 462
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + + + NL M+ G PN L+ ++ + +A + M +
Sbjct: 463 LCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPD 522
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + L L +G++ EAE+ + ++ ++G P + ++
Sbjct: 523 LFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTY 561
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 110/251 (43%), Gaps = 35/251 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGG------ 54
+++ G+ PD +Y+ LI YCK +EKA +++ +M + + P+ +YT ++ G
Sbjct: 549 VQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSND 608
Query: 55 -----------LGLVGQPDK------------------ARDVLKEMKEYGCYPDAAAYNA 85
LG +PD A VL E+++ G PD Y++
Sbjct: 609 YEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSS 668
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
I C + A GL+DEM ++GL P YN F S D+ + N++ ++ G
Sbjct: 669 LISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKG 728
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
+PN + L+ + + A L+ +M+++G V +VL D L +A
Sbjct: 729 LVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQAL 788
Query: 206 KSFLEMIEKGH 216
EM +G+
Sbjct: 789 FLTEEMFNRGY 799
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 99/223 (44%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++G+ P N L+ + +E +K+ M I PDV +Y++ I
Sbjct: 199 MADLGLAPTRRCCNGLLKDLLRADAMELLWKLKGFMEGAGILPDVYTYSTFIEAHCKARD 258
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A+ V +EM+ C + YN I C + + +A G +EMV+ GLSP+A TY
Sbjct: 259 FDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGA 318
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L+ + L M +G PN LV ++ K A + +M+ G
Sbjct: 319 LMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAG 378
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ D L LC +G+L A K EMI+ G +P ++
Sbjct: 379 VQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTY 421
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 103/224 (45%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + V PD+ YN LI ++E+A + +++ + PD +Y+ +I G G
Sbjct: 514 MTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGN 573
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA +L++M G P+A Y + Y + S ++ M+ G P+ Y +
Sbjct: 574 LEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGI 633
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
R S ++ ++ + + G +P+ L+ LCK + +E A+ L ++M ++
Sbjct: 634 VIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIAD-MEKAVGLLDEMAKE 692
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G I+ + L D C G + A F ++ KG P+ V++
Sbjct: 693 GLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTY 736
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 101/227 (44%), Gaps = 8/227 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV+P+ + Y+ LI CK Q+ +A K++++M + PD +Y ++ G
Sbjct: 374 MISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHD 433
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A ++L EM+ G P+ +Y I C ++A L++EM+ +GL PNA Y
Sbjct: 434 KDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAP 493
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMF----LVKLCKRQEKVEIALQLWNDM 176
+ + +L C + N +F L+K ++E A + + +
Sbjct: 494 LI----IGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQV 549
Query: 177 VEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++G L C G L +A++ +M+ G KP+ ++
Sbjct: 550 QKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTY 596
Score = 40.8 bits (94), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 67/187 (35%)
Query: 37 RDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRL 96
R SP ++ G A V+ M + G P N +++ A +
Sbjct: 165 RSRSPSPSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAM 224
Query: 97 RDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFL 156
L M G+ P+ TY+ F + D ++ ++ M C N + +
Sbjct: 225 ELLWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVM 284
Query: 157 VKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGH 216
+ R VE A +MV+ G L + LC +L EA+ EM G
Sbjct: 285 ISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGL 344
Query: 217 KPSQVSF 223
KP+ V +
Sbjct: 345 KPNIVVY 351
>gi|225459754|ref|XP_002284756.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Vitis vinifera]
Length = 531
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 129/256 (50%), Gaps = 6/256 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G++P++ +Y+ +ID C+ Q+ +A+ + +M D P+ I++ +++ G+
Sbjct: 276 MKMAGIQPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGR 335
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+K V +MK GC PDA YN I ++C L +A +++ V+KG + NA+++N
Sbjct: 336 TEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKILNS-VKKGCNLNASSFNP 394
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F D+ S+ ++ +M C PNT + L+++ ++ ++ L+L +M E
Sbjct: 395 IFGCISKLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMFADKKSTDMVLKLRKEMDENE 454
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMI-EKGHKPS----QVSFRRIKALMELANK 235
VL C +G A F EMI EK +PS ++ ++++ +L
Sbjct: 455 IEPNANTYRVLISTFCGIGHWNNAYSFFKEMIEEKCLRPSLPVYEMVLQQLRKAGQLKKH 514
Query: 236 QEALQNLSNKMALFGP 251
+E ++ + N+ + P
Sbjct: 515 EELVEKMVNRGFVTRP 530
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 107/260 (41%), Gaps = 37/260 (14%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+ E G P+ Y +ID+ K RQ + A+++++ M+ ++ V ++T ++ G
Sbjct: 139 LEEFGHSPE--PYMEMIDLAGKVRQFDLAWQLIDLMKTRNVEIPVETFTILVRRYVKAGL 196
Query: 61 PDKARDVLKEMKEYGCYPDAAA----------------------------------YNAA 86
+A M++YGC PD A Y +
Sbjct: 197 AAEAVHAFNRMEDYGCKPDKIAFSVVISSLSKKRRAIEAQSFFDSLKDRFEPDVVVYTSL 256
Query: 87 IRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGC 146
+ +C A + +A + EM G+ PN TY++ S + + +++ M+ GC
Sbjct: 257 VHGWCRAGNISEAERVFGEMKMAGIQPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGC 316
Query: 147 LPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEK 206
PN + L+++ + + E LQ++N M G + + L + C L EA K
Sbjct: 317 DPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVK 376
Query: 207 SFLEMIEKGHKPSQVSFRRI 226
L ++KG + SF I
Sbjct: 377 -ILNSVKKGCNLNASSFNPI 395
>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 756
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 117/225 (52%), Gaps = 2/225 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E G PD +Y+ LI+ C +R++++A ++++M + +V+ Y ++I GL +
Sbjct: 433 MKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNR 492
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A D+ +M+ G + YN I C +KR+ +A+ LMD+M+ +GL P+ TY
Sbjct: 493 VGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTT 552
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEK 179
+ F D++ + ++ M GC P+ + L+ LCK +V++A +L + K
Sbjct: 553 MLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCK-AGRVDVASKLLRSVQMK 611
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
G + + LC + EA + F EM+EKG P ++++
Sbjct: 612 GMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYK 656
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 118/251 (47%), Gaps = 2/251 (0%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
+P+ V+YN LI CK+ VE A ++ + + + PDV ++ S+I GL L + A +
Sbjct: 369 EPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAME 428
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
+ +EMKE GC PD Y+ I + C +RL++A L+ EM G + N YN
Sbjct: 429 LFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLC 488
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYI 185
+N + + +++ +M G ++ + L+ LCK + +VE A QL + M+ +G
Sbjct: 489 KNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSK-RVEEAAQLMDQMIMEGLKPDK 547
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNK 245
+ C G + A M G +P V++ + + A + + L
Sbjct: 548 FTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRS 607
Query: 246 MALFGPSMIPK 256
+ + G + P+
Sbjct: 608 VQMKGMVLTPQ 618
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 122/249 (48%), Gaps = 2/249 (0%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E G PD V++N L++ C+ +++ ++++ M ++ DV +Y S+I GL +G+ D
Sbjct: 295 EEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEID 354
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
+A ++L M C P+ YN I C + A+ L + KG+ P+ T+N
Sbjct: 355 EAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLI 414
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
+ +++ + L+ M GC P+ + L++ + +++ AL L +M G
Sbjct: 415 QGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCA 474
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQN 241
++V + L D LC ++ +AE F +M G S V++ I L + +EA Q
Sbjct: 475 RNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQ- 533
Query: 242 LSNKMALFG 250
L ++M + G
Sbjct: 534 LMDQMIMEG 542
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 94/178 (52%), Gaps = 3/178 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+KPD +Y ++ +C+ +++A IV+ M PD+++Y ++IGGL G+ D A
Sbjct: 542 GLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVA 601
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR- 123
+L+ ++ G AYN I+ C KR ++A L EM+EKG P+ TY + FR
Sbjct: 602 SKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRG 661
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKG 180
+ ++ + + M+ G LP S FL + LC + + +QL N ++EKG
Sbjct: 662 LCNGGGPIQEAVDFTVEMLEKGILPEFPSFGFLAEGLCSLSME-DTLIQLINMVMEKG 718
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 106/224 (47%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G + D+ +YN LI CK ++++A +I+ M D P+ ++Y ++IG L
Sbjct: 328 MLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENH 387
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A ++ + + G PD +N+ I+ C+ A L +EM EKG P+ TY++
Sbjct: 388 VEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSI 447
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
L+ + L M +GC N L+ LCK +V A +++ M
Sbjct: 448 LIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNN-RVGDAEDIFDQMEML 506
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G + + L + LC ++ EA + +MI +G KP + ++
Sbjct: 507 GVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTY 550
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 105/247 (42%), Gaps = 12/247 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G++PD ++ L+ + ++ VE A +I E M + +S ++ GL G+
Sbjct: 225 MPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCKEGR 284
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A + E E G PD +NA + C ++ +MD M+EKG + TYN
Sbjct: 285 IEEALRFIYE--EEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNS 342
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++ + + M+ C PNT + L+ ++ VE A +L + KG
Sbjct: 343 LISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKG 402
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF----------RRIKALM 230
+ + L LC A + F EM EKG P + ++ RR+K +
Sbjct: 403 VLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEAL 462
Query: 231 ELANKQE 237
L + E
Sbjct: 463 MLLKEME 469
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 103/242 (42%), Gaps = 2/242 (0%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
R+ VKPD YN + + K +++ + KM + + PDV ++ +I L Q
Sbjct: 156 RDFAVKPDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQL 215
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
A +L++M YG PD + ++ + + A + + MVE G + + N+
Sbjct: 216 RPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVL 275
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
+ + G P+ + LV R ++ L++ + M+EKGF
Sbjct: 276 VNGLCKEGRIEEALRFIYE--EEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGF 333
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQN 241
+ + L LC +G++ EA + M+ + +P+ V++ + + N EA
Sbjct: 334 ELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATE 393
Query: 242 LS 243
L+
Sbjct: 394 LA 395
>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
Length = 592
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 116/251 (46%), Gaps = 2/251 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G PDIV+YN +I C R++ A +++++ ++ P VI+YT +I + G
Sbjct: 173 MKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTILIEATIVEGG 232
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A +L+EM G PD YNA IR C + A+ L+ + KG P+ +YN+
Sbjct: 233 INEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNI 292
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
R F L M GC PN + L+ R +++ A+ + M+EK
Sbjct: 293 LLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKE 352
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI-KALMELANKQEAL 239
D L LC G+L A MI G P V++ I AL + N +AL
Sbjct: 353 LTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQAL 412
Query: 240 QNLSNKMALFG 250
+ + NK+ G
Sbjct: 413 E-IFNKLRGMG 422
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 110/223 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G +P+ V+Y+ LI C+ ++++A +++ M +++++PD SY +I L G+
Sbjct: 313 MFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGR 372
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A ++ M GC PD YN + C A + +++ G PN ++YN
Sbjct: 373 LDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNT 432
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ D + + M+ G P+ + L+ R VE A+ L +DM + G
Sbjct: 433 MISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSG 492
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
F ++ +++ LC + ++ +A F EMIEKG +P++ ++
Sbjct: 493 FRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTY 535
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 110/239 (46%), Gaps = 2/239 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PD++ LI + + +EKA +++E + + PDV +Y ++I G V Q + A
Sbjct: 108 GYTPDVILCTKLIKGFFNFKNIEKASRVMEIL-ESHTEPDVFAYNAVISGFCKVNQIEAA 166
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
VL MK G PD YN I + C ++L A ++D+++ P TY +
Sbjct: 167 TQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTILIEA 226
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + L M+ G LP+ + +++ ++ VE A +L + KG
Sbjct: 227 TIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPD 286
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEALQNL 242
++ ++L + GK E EK EM +G +P++V++ I +L EA+ L
Sbjct: 287 VISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVL 345
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 104/227 (45%), Gaps = 2/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ PD+ +YN +I CK+ VE+A +++ + + PDVISY ++ G+
Sbjct: 243 MLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGK 302
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+ ++ EM GC P+ Y+ I + C R+ +A ++ M+EK L+P+ +Y+
Sbjct: 303 WDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDP 362
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPN-TQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
L + + M+ GCLP+ L LCK + AL+++N +
Sbjct: 363 LISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQ-ALEIFNKLRGM 421
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G + + + L G A MI KG P ++++ +
Sbjct: 422 GCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSL 468
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 67/124 (54%), Gaps = 4/124 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVY--CKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLV 58
+R MG P++ SYN +I C DR +A +V M + I PD I+Y S+I L
Sbjct: 418 LRGMGCPPNVSSYNTMISALWSCGDRS--RALGMVPAMISKGIDPDEITYNSLISCLCRD 475
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
G ++A +L +M++ G P +YN + C +R+ DA G+ EM+EKG PN TTY
Sbjct: 476 GLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTY 535
Query: 119 NLFF 122
L
Sbjct: 536 ILLI 539
>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12300, mitochondrial; Flags: Precursor
gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 115/224 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E +K D V Y+ +ID CK ++ A+ + +M + I+ ++I+Y +IGG G+
Sbjct: 254 MEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGR 313
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D +L++M + P+ ++ I ++ +LR+A L EM+ +G++P+ TY
Sbjct: 314 WDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTS 373
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F N L + + M+ GC PN ++ L+ + +++ L+L+ M +G
Sbjct: 374 LIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRG 433
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
+ + + L C++GKL A++ F EM+ + P+ V+++
Sbjct: 434 VVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYK 477
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 110/217 (50%), Gaps = 4/217 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ +I++YN LI +C + + K++ M I+P+V++++ +I G+
Sbjct: 289 MEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGK 348
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++ KEM G PD Y + I +C L A+ ++D MV KG PN T+N+
Sbjct: 349 LREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNI 408
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ +N + L+ +M G + +T + L++ K+ +A +L+ +MV +
Sbjct: 409 LINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRK 468
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHK 217
I+ +L D LCD G E+EK+ LE+ EK K
Sbjct: 469 VPPNIVTYKILLDGLCDNG---ESEKA-LEIFEKIEK 501
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 113/221 (51%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
++G +P+ ++++ LI+ C + +V +A ++V++M + PD+I+ +++ GL L G+
Sbjct: 151 KLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEA 210
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
+A ++ +M EYGC P+A Y + C + + A L+ +M E+ + +A Y++
Sbjct: 211 EAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
L +++NL+ M G N + L+ + + +L DM+++
Sbjct: 271 DGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKIN 330
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ VL D GKL EAE+ EMI +G P +++
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITY 371
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 110/248 (44%), Gaps = 35/248 (14%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ P++V+++ LID + K+ ++ +A ++ ++M I+PD I+YTS+I G DKA
Sbjct: 329 INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKAN 388
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
++ M GC P+ +N I YC A R+ D L +M +G+ + TYN + F
Sbjct: 389 QMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGF 448
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQE--------------KVEIAL 170
L + L+ M+ PN + L+ LC E K+E+ +
Sbjct: 449 CELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDI 508
Query: 171 QLWNDMVE--------------------KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLE 210
++N ++ KG + +++ LC G L EAE F +
Sbjct: 509 GIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRK 568
Query: 211 MIEKGHKP 218
M E GH P
Sbjct: 569 MEEDGHAP 576
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 110/220 (50%), Gaps = 2/220 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ ++ + + +I+ +C+ R++ A+ + K+ P+ I+++++I GL L G+ +A
Sbjct: 118 GIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEA 177
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+++ M E G PD N + C++ + +A L+D+MVE G PNA TY V
Sbjct: 178 LELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNV 237
Query: 125 FYWSNDLRSSWNLYCRMMGTGC-LPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
S + L +M L + + + LCK ++ A L+N+M KG +
Sbjct: 238 MCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCK-HGSLDNAFNLFNEMEMKGITT 296
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I+ ++L C+ G+ + K +MI++ P+ V+F
Sbjct: 297 NIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTF 336
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 101/208 (48%), Gaps = 4/208 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV D V+YN LI +C+ ++ A ++ ++M + P++++Y ++ GL G+ +KA
Sbjct: 433 GVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKA 492
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++ +++++ D YN I C A ++ DA L + KG+ P TYN+
Sbjct: 493 LEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGG 552
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
L + L+ +M G P+ + L++ +++L ++ GF
Sbjct: 553 LCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVD 612
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMI 212
++ D+L D G+L +KSFL+M+
Sbjct: 613 ASTIKMVIDMLSD-GRL---KKSFLDML 636
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 1/192 (0%)
Query: 56 GLVG-QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPN 114
GLV + D A D+ ++M P ++ K+ L +M KG++ N
Sbjct: 63 GLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHN 122
Query: 115 ATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWN 174
T ++ F L +++ +++ G PNT + L+ + +V AL+L +
Sbjct: 123 LYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVD 182
Query: 175 DMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELAN 234
MVE G ++ + L + LC GK EA +M+E G +P+ V++ + +M +
Sbjct: 183 RMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSG 242
Query: 235 KQEALQNLSNKM 246
+ L KM
Sbjct: 243 QTALAMELLRKM 254
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 93/229 (40%), Gaps = 2/229 (0%)
Query: 23 DRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAA 82
D + + A + M P VI ++ + + Q D + K+M+ G +
Sbjct: 66 DIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYT 125
Query: 83 YNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMM 142
+ I +C ++L A M ++++ G PN T++ + + L RM+
Sbjct: 126 LSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMV 185
Query: 143 GTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKL 201
G P+ + LV LC ++ E A+ L + MVE G + + +++C G+
Sbjct: 186 EMGHKPDLITINTLVNGLCLSGKEAE-AMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQT 244
Query: 202 VEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFG 250
A + +M E+ K V + I + + NL N+M + G
Sbjct: 245 ALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKG 293
>gi|356508608|ref|XP_003523047.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18900-like [Glycine max]
Length = 879
Score = 107 bits (268), Expect = 4e-21, Method: Composition-based stats.
Identities = 62/219 (28%), Positives = 106/219 (48%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
R+ G D +Y ++ + + R+ K++E+M + P+V++Y +I G
Sbjct: 375 RQPGFWHDGHTYTTMVGILGRAREFGAINKLLEQMVKDGCQPNVVTYNRLIHSYGRANYL 434
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
+A +V +M+E GC PD Y I + A L A + + M E GLSP+ TY++
Sbjct: 435 REALNVFNQMQEMGCEPDRVTYCTLIDIHAKAGFLDVAMSMYERMQEVGLSPDTFTYSVM 494
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
S +L ++ L+C M+ GC+PN + L+ L + + AL+L+ DM GF
Sbjct: 495 INCLGKSGNLSAAHRLFCEMVDQGCVPNIVTYNILIALQAKARNYQTALELYRDMQNAGF 554
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQ 220
+ ++ ++L G L EAE F EM + P +
Sbjct: 555 KPDKVTYSIVMEVLGHCGYLEEAEAVFFEMRQNHWVPDE 593
Score = 90.9 bits (224), Expect = 5e-16, Method: Composition-based stats.
Identities = 59/219 (26%), Positives = 99/219 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+EMG +PD V+Y LID++ K ++ A + E+M++ +SPD +Y+ +I LG G
Sbjct: 444 MQEMGCEPDRVTYCTLIDIHAKAGFLDVAMSMYERMQEVGLSPDTFTYSVMINCLGKSGN 503
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A + EM + GC P+ YN I A+ + A L +M G P+ TY++
Sbjct: 504 LSAAHRLFCEMVDQGCVPNIVTYNILIALQAKARNYQTALELYRDMQNAGFKPDKVTYSI 563
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
V L + ++ M +P+ LV L + VE A + ++ M+ G
Sbjct: 564 VMEVLGHCGYLEEAEAVFFEMRQNHWVPDEPVYGLLVDLWGKAGNVEKAWEWYHTMLRAG 623
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
+ + L + +L +A M+ G PS
Sbjct: 624 LLPNVPTCNSLLSAFLRVHRLPDAYNLLQNMVTLGLNPS 662
Score = 74.3 bits (181), Expect = 5e-11, Method: Composition-based stats.
Identities = 45/164 (27%), Positives = 75/164 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G P+IV+YN LI + K R + A ++ M++ PD ++Y+ ++ LG G
Sbjct: 514 MVDQGCVPNIVTYNILIALQAKARNYQTALELYRDMQNAGFKPDKVTYSIVMEVLGHCGY 573
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A V EM++ PD Y + + A + A M+ GL PN T N
Sbjct: 574 LEEAEAVFFEMRQNHWVPDEPVYGLLVDLWGKAGNVEKAWEWYHTMLRAGLLPNVPTCNS 633
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQE 164
F + L ++NL M+ G P+ Q+ L+ C +
Sbjct: 634 LLSAFLRVHRLPDAYNLLQNMVTLGLNPSLQTYTLLLSCCTEAQ 677
Score = 72.4 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 44/170 (25%), Positives = 82/170 (48%), Gaps = 1/170 (0%)
Query: 72 KEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDL 131
++ G + D Y + A+ + L+++MV+ G PN TYN + +N L
Sbjct: 375 RQPGFWHDGHTYTTMVGILGRAREFGAINKLLEQMVKDGCQPNVVTYNRLIHSYGRANYL 434
Query: 132 RSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVL 191
R + N++ +M GC P+ + L+ + + +++A+ ++ M E G V+
Sbjct: 435 REALNVFNQMQEMGCEPDRVTYCTLIDIHAKAGFLDVAMSMYERMQEVGLSPDTFTYSVM 494
Query: 192 FDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELA-NKQEALQ 240
+ L G L A + F EM+++G P+ V++ + AL A N Q AL+
Sbjct: 495 INCLGKSGNLSAAHRLFCEMVDQGCVPNIVTYNILIALQAKARNYQTALE 544
>gi|357439843|ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479247|gb|AES60450.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 834
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 114/220 (51%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
+PD+V YN +ID CKD+ V A+ + +M ++ + P+V++YTS+I G +VGQ DKA
Sbjct: 186 RPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFG 245
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
+L EM P+ +N + C ++R+A L+ M+++G+ P+ TYN ++
Sbjct: 246 LLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYF 305
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+ + N++ M G + S ++ + + ++ A+ L+ M + ++
Sbjct: 306 LVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVV 365
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
L D LC G++ A K EM ++G P+ +++ +
Sbjct: 366 AYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSL 405
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 116/239 (48%), Gaps = 1/239 (0%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
V P++ ++N L+D CK+ ++ +A +V M E + PDV +Y +++ G LV + KA+
Sbjct: 255 VNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAK 314
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+V M + G D +Y+ I K L +A L + M + + P+ Y+
Sbjct: 315 NVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGL 374
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
S + S+ M G PN + L+ + +V+ A+ L + ++G + +
Sbjct: 375 CKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANM 434
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEALQNLS 243
++L D LC G+L +A+K F +++ KGH V++ I L + + EAL LS
Sbjct: 435 YTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLS 493
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 111/250 (44%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G++ + ++ N LI+ YC RQ+ A+ + K+ PD+I+YT++I GL L GQ
Sbjct: 75 MELHGIQSNYITLNILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQ 134
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++ + + G D +Y I C + A L+ ++ + P+ YN
Sbjct: 135 VKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNT 194
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+R +++LYC M PN + L+ +++ A L N+MV K
Sbjct: 195 IIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKN 254
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ + L D LC GK+ EA+ M+++G P ++ + L + +
Sbjct: 255 VNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAK 314
Query: 241 NLSNKMALFG 250
N+ N MA G
Sbjct: 315 NVFNIMAQMG 324
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 78/149 (52%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR V PD+V+Y+ LID CK ++ A K V++M D P+VI+YTS+I L Q
Sbjct: 355 MRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQ 414
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA +LK++K+ G + YN + C RL DA + +++ KG + + TY++
Sbjct: 415 VDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSI 474
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPN 149
+ + L +M GC+P+
Sbjct: 475 MINGLCKESLFDEALTLLSKMEDKGCVPD 503
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/207 (20%), Positives = 88/207 (42%), Gaps = 2/207 (0%)
Query: 43 PDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGL 102
P +I + I+G L + + M+ +G + N I +YC +++ A +
Sbjct: 47 PPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNILINSYCHLRQINSAFSV 106
Query: 103 MDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGC-LPNTQSCMFLVKLCK 161
++++ G P+ TY R + ++ S N + R++ G L + + LCK
Sbjct: 107 FAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCK 166
Query: 162 RQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQV 221
+ AL+L + + +++ + + D LC + +A + EM EK P+ V
Sbjct: 167 IGQTGP-ALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVV 225
Query: 222 SFRRIKALMELANKQEALQNLSNKMAL 248
++ + + + + L N+M L
Sbjct: 226 TYTSLIYGFCIVGQLDKAFGLLNEMVL 252
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G D+V+Y+ +I+ CK+ ++A ++ KM D+ PD I+Y +II DKA
Sbjct: 464 GHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDKA 523
Query: 65 RDVLKEMKEYGCYPD 79
+L+EM + Y D
Sbjct: 524 EKLLREMIDCVDYKD 538
>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
Length = 671
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 112/224 (50%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
++G +PD ++ LI C + ++ +A + +KM E PDV++Y ++I GL VG
Sbjct: 124 KLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTS 183
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
A +L M + C P+ AYN I + C +++ +A L EMV KG+SP+ TYN
Sbjct: 184 AAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLI 243
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
+ + L M+ + +P+ S +V ++ KV A + + M+++G
Sbjct: 244 HALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVE 303
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ L D C + ++ EA K F M+ KG P+ +S+ +
Sbjct: 304 PNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTL 347
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 121/264 (45%), Gaps = 26/264 (9%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + +P++ +YN +ID CKDRQV +A+ + +M + ISPD+ +Y S+I L + +
Sbjct: 192 MVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCE 251
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+L EM + PD ++N + C ++ +A ++D+M+++G+ PN TY
Sbjct: 252 WKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTA 311
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+++ + ++ M+ GC+PN S L+ + ++++ A+
Sbjct: 312 LMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHY-------- 363
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
L D C + EA K F M+ KG P+ +S+ L N +Q
Sbjct: 364 --------TXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYN------TLINGYCKIQ 409
Query: 241 NLSNKMALFG----PSMIPKREEY 260
+ M LFG +IP Y
Sbjct: 410 RIDKAMYLFGEMCRQELIPDTVTY 433
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 113/243 (46%), Gaps = 19/243 (7%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ PDI +YN LI C + + ++ +M D I PDV+S+ +++ L G+
Sbjct: 227 MVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGK 286
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A DV+ +M + G P+ Y A + +C+ + +A + D MV KG PN +YN
Sbjct: 287 VTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNT 346
Query: 121 FF----------RVFYWSN---------DLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCK 161
+ +++ ++ + ++ M+ GC+PN S L+
Sbjct: 347 LINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYC 406
Query: 162 RQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQV 221
+ ++++ A+ L+ +M + + L LC + +L +A F EM+ P+ V
Sbjct: 407 KIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLV 466
Query: 222 SFR 224
++R
Sbjct: 467 TYR 469
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 103/230 (44%), Gaps = 19/230 (8%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKA-------------------YKIVEKMRDEDISPDV 45
G P+++SYN LI+ YCK ++++KA K+ + M + P+V
Sbjct: 336 GCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNV 395
Query: 46 ISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDE 105
ISY ++I G + + DKA + EM PD Y+ I C +RL+DA L E
Sbjct: 396 ISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHE 455
Query: 106 MVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEK 165
MV PN TY + + L + L + G+ P+ Q + R +
Sbjct: 456 MVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGE 515
Query: 166 VEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
+E A L++++ KG + ++ + LC G L EA K F EM E G
Sbjct: 516 LEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENG 565
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 107/238 (44%), Gaps = 21/238 (8%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV+P++V+Y L+D +C ++++A K+ + M + P+VISY ++I G + +
Sbjct: 297 MIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQR 356
Query: 61 PDKARD-------------------VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASG 101
DKA V M GC P+ +YN I YC +R+ A
Sbjct: 357 IDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMY 416
Query: 102 LMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LC 160
L EM + L P+ TY+ L+ + L+ M+ +PN + L+ LC
Sbjct: 417 LFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLC 476
Query: 161 KRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
K + E A+ L + I V+++ D +C G+L A F + KG +P
Sbjct: 477 KNRYLAE-AMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQP 533
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 96/227 (42%), Gaps = 2/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M M P V +N L+ K + + +M I P++ + +I + +
Sbjct: 52 MLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNR 111
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A VL ++ + G PD A + IR C+ ++ +A L D+M+ +G P+ TY
Sbjct: 112 VGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGT 171
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEK 179
+ ++ L M+ C PN + ++ LCK ++ E A L+++MV K
Sbjct: 172 LINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTE-AFNLFSEMVTK 230
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G I + L LC++ + EM++ P VSF +
Sbjct: 231 GISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTV 277
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 71/152 (46%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P++V+Y L+D CK+R + +A +++ + ++ PD+ I G+ G+ + ARD+
Sbjct: 463 PNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDL 522
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
+ G PD Y+ I C L +AS L EM E G + N YN R F
Sbjct: 523 FSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLR 582
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKL 159
+N+ + L M+ G + + VK+
Sbjct: 583 NNETSRAIQLLQEMVARGFSADASTMTLFVKM 614
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 105/250 (42%), Gaps = 43/250 (17%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G P+++SYN LI+ YCK ++++KA + +M +++ PD ++Y+++I GL V + A
Sbjct: 390 GCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDA 449
Query: 65 RDVLKEMK---------------EYGCY--------------------PDAAAYNAAIRN 89
+ EM +Y C PD N AI
Sbjct: 450 IALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDG 509
Query: 90 YCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPN 149
C A L A L + KGL P+ TY++ L + L+ M GC N
Sbjct: 510 MCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLN 569
Query: 150 TQSCMF--LVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKS 207
C++ + + R + A+QL +MV +GF + + +L D G ++S
Sbjct: 570 --GCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDG----LDQS 623
Query: 208 FLEMIEKGHK 217
+++ G K
Sbjct: 624 LKQILRNGCK 633
>gi|356529971|ref|XP_003533559.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Glycine max]
Length = 693
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 109/222 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E G+ P+ +Y LID +CK E+AY+++ M +E SP+V +Y +I+ GL G+
Sbjct: 369 MKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGR 428
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A VLK G D Y I +C ++ A L ++MV+ G+ P+ +Y
Sbjct: 429 VQEAYKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTT 488
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
VF ++ S + + G +P ++ ++ R+ + +AL+ ++ M + G
Sbjct: 489 LIAVFCREKRMKESEMFFEEAVRFGLVPTNKTYTSMICGYCREGNLRLALKFFHRMSDHG 548
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
S + L LC KL EA + MIEKG P +V+
Sbjct: 549 CASDSITYGALISGLCKQSKLDEARCLYDAMIEKGLTPCEVT 590
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 128/262 (48%), Gaps = 5/262 (1%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
EMG++P+++++ C+I+ CK V++A++++E+M P+V ++T++I GL G +
Sbjct: 265 EMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGLCKKGWTE 324
Query: 63 KA-RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
KA R LK ++ P+ Y A I YC +++ A L+ M E+GL+PN TY
Sbjct: 325 KAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTL 384
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKG 180
+ + ++ L M G PN + +V LCK+ +V+ A ++ G
Sbjct: 385 IDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKG-RVQEAYKVLKSGFRNG 443
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ + +L C ++ +A F +M++ G +P S+ + A+ + + +
Sbjct: 444 LDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESE 503
Query: 241 NLSNKMALFGPSMIPKREEYLA 262
+ FG ++P + Y +
Sbjct: 504 MFFEEAVRFG--LVPTNKTYTS 523
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 103/212 (48%), Gaps = 5/212 (2%)
Query: 15 CLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEY 74
C++ + + +V++A ++V +M ++ ++P + ++ + +G + A ++ EM
Sbjct: 137 CMVKSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAENLFDEMCAR 196
Query: 75 GCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSS 134
G P+ +Y + YC + ++ + M+E+G + T +L R F + +
Sbjct: 197 GVQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREFCEKGFVTRA 256
Query: 135 WNLYCRMMGTGCLPN--TQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLF 192
+ R G PN +CM + LCKR V+ A ++ +MV +G+ + L
Sbjct: 257 LWYFRRFCEMGLRPNLINFTCM-IEGLCKRGS-VKQAFEMLEEMVGRGWKPNVYTHTALI 314
Query: 193 DLLCDMGKLVEAEKSFLEMIE-KGHKPSQVSF 223
D LC G +A + FL+++ + HKP+ +++
Sbjct: 315 DGLCKKGWTEKAFRLFLKLVRSENHKPNVLTY 346
Score = 43.5 bits (101), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 39/88 (44%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
G+ P +Y +I YC++ + A K +M D + D I+Y ++I GL + D+
Sbjct: 512 FGLVPTNKTYTSMICGYCREGNLRLALKFFHRMSDHGCASDSITYGALISGLCKQSKLDE 571
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYC 91
AR + M E G P YC
Sbjct: 572 ARCLYDAMIEKGLTPCEVTRVTLAYEYC 599
>gi|357499719|ref|XP_003620148.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|217074978|gb|ACJ85849.1| unknown [Medicago truncatula]
gi|355495163|gb|AES76366.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 465
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 110/222 (49%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
V+P++V Y+ +ID CKD+ V A+ + +M + ISP+V++Y+++I G VG+ A
Sbjct: 223 VQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAV 282
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
D+ +M PD +N + +C + ++ A L+DEM ++G PN TY+
Sbjct: 283 DLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDAL 342
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
++ + + L ++ G PN + L+ K+E A ++ D++ KG+ +
Sbjct: 343 CKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITV 402
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIK 227
+ V+F C G EA +M E G P ++ IK
Sbjct: 403 VTYIVMFYGFCKKGLFDEASALLSKMEENGCIPDAKTYELIK 444
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 117/240 (48%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
+MG P+ +++ LI C Q+ +A +K+ + ISY ++I GL VG+
Sbjct: 150 KMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETR 209
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
A D+L+ + P+ Y+ I C K + DA L EMV KG+SPN TY+
Sbjct: 210 AALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALI 269
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
F+ L+ + +L+ +M+ P+ + LV + + K+ AL+L ++M ++G
Sbjct: 270 SGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQP 329
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNL 242
I+ + D LC ++ +A ++ ++G +P+ ++ + + + K E +N+
Sbjct: 330 PNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNI 389
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 110/221 (49%), Gaps = 2/221 (0%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
+G + + +SY LID CK + A ++ ++ + + P+V+ Y++II G+ +
Sbjct: 186 LGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVND 245
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
A D+ EM G P+ Y+A I + +L+DA L ++M+ + + P+ T+N+
Sbjct: 246 AFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVD 305
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
VF S + + L M G PN + L LCK +V+ A+ L + ++G
Sbjct: 306 VFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTH-RVDKAVALLTKLKDQGIR 364
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ +L D LC GKL +A F +++ KG+ + V++
Sbjct: 365 PNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTY 405
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 67/120 (55%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G P+IV+Y+ ++D CK +V+KA ++ K++D+ I P++ +YT +I GL G+
Sbjct: 323 MHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGK 382
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ AR++ +++ G Y +C +AS L+ +M E G P+A TY L
Sbjct: 383 LEDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKMEENGCIPDAKTYEL 442
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/217 (20%), Positives = 89/217 (41%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P + +N ++ K + + +KM I P++++ +I +G A V
Sbjct: 85 PPAIEFNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSV 144
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
++ + G P+ + I+ C+ ++ A D++V G N +Y
Sbjct: 145 FAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCK 204
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ R++ +L R+ G PN ++ + + V A L+++MV KG ++
Sbjct: 205 VGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVT 264
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
L +GKL +A F +MI + KP +F
Sbjct: 265 YSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFN 301
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/241 (19%), Positives = 100/241 (41%), Gaps = 2/241 (0%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
K +++ Y+ + + V+ A + + ++ +P I + I+G L
Sbjct: 49 KINLIPYSSTSTTFHSNNDVDDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLY 108
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
+ K+M+ G P+ N I +C + A + ++++ G +PN T+ +
Sbjct: 109 LSKKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLC 168
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ + N + +++ G N S L+ LCK E AL L + K +
Sbjct: 169 LKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGE-TRAALDLLRRVDGKLVQPNV 227
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNK 245
++ + D +C + +A + EM+ KG P+ V++ + + K + +L NK
Sbjct: 228 VMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNK 287
Query: 246 M 246
M
Sbjct: 288 M 288
>gi|357120336|ref|XP_003561883.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62590-like [Brachypodium distachyon]
Length = 525
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 102/217 (47%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
PD YNC I V C +++E+A ++ M DE + P V SYT+I+ G G+ +A
Sbjct: 143 SPDAAVYNCYISVLCDSQRLEEARGFLDHMVDEGVRPTVRSYTTILRGYCQQGKILEAEK 202
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
++ +M + GC PD +Y+ I C + ++ E +KG +PNA TYN++
Sbjct: 203 LVDDMVDAGCQPDVVSYSVLIEGLCSVREFDKVERILRESEDKGWTPNAITYNIYMSGLC 262
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+ L ++ M G LP ++ L R + A+ L E G+ + +
Sbjct: 263 RTGLLDDTFRQVDIMRSRGLLPTVETVNILFDCLCRDSRFSEAVLLLEHSEELGWHADVF 322
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ L LCD+G K +++++KG P SF
Sbjct: 323 CYNTLMGRLCDIGDFARVFKLLVDLLKKGIGPDMFSF 359
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 95/216 (43%), Gaps = 5/216 (2%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P +YN L+ Y + + ++ ++ R P +T++I L G+P AR
Sbjct: 44 PTPAAYNALMSAYSRAGRPDEVLRL---FRFLPFHPTARIFTTLISSLAASGRPMAARAA 100
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
+ G P A+A+ A +++Y L + M SP+A YN + V
Sbjct: 101 FSSLIVSGLTPTASAFTALLKSY--DSSLDAMYQVFLAMAAARCSPDAAVYNCYISVLCD 158
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
S L + M+ G P +S +++ +Q K+ A +L +DMV+ G ++
Sbjct: 159 SQRLEEARGFLDHMVDEGVRPTVRSYTTILRGYCQQGKILEAEKLVDDMVDAGCQPDVVS 218
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
VL + LC + + + E+ E +KG P+ +++
Sbjct: 219 YSVLIEGLCSVREFDKVERILRESEDKGWTPNAITY 254
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 104/264 (39%), Gaps = 4/264 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G +PD+VSY+ LI+ C R+ +K +I+ + D+ +P+ I+Y + GL G
Sbjct: 207 MVDAGCQPDVVSYSVLIEGLCSVREFDKVERILRESEDKGWTPNAITYNIYMSGLCRTGL 266
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D + M+ G P N C R +A L++ E G + YN
Sbjct: 267 LDDTFRQVDIMRSRGLLPTVETVNILFDCLCRDSRFSEAVLLLEHSEELGWHADVFCYNT 326
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
D + L ++ G P+ S ++ K +A L ++ +
Sbjct: 327 LMGRLCDIGDFARVFKLLVDLLKKGIGPDMFSFTIAIRGLCGAGKHRVAECLIDN---ES 383
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEAL 239
G ++ + L C G L + +++ M + P+ + I +L EA+
Sbjct: 384 IGYDVVAFNTLIHGFCIAGDLRGVKLTYMNMYSRQISPNNYTHALLIDSLFNDRKFVEAI 443
Query: 240 QNLSNKMALFGPSMIPKREEYLAE 263
L++ P + +LA+
Sbjct: 444 DTLASLRDGLVPDHLIHLNNFLAK 467
>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
Length = 975
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 115/224 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E +K D V Y+ +ID CK ++ A+ + +M + I+ ++I+Y +IGG G+
Sbjct: 352 MEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGR 411
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D +L++M + P+ ++ I ++ +LR+A L EM+ +G++P+ TY
Sbjct: 412 WDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTS 471
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F N L + + M+ GC PN ++ L+ + +++ L+L+ M +G
Sbjct: 472 LIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRG 531
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
+ + + L C++GKL A++ F EM+ + P+ V+++
Sbjct: 532 VVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYK 575
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 116/234 (49%), Gaps = 1/234 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G +P+ V+Y +++V CK Q A +++ KM + +I D + Y+ II GL G
Sbjct: 317 MVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGS 376
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A ++ EM+ G + YN I +C A R D + L+ +M+++ ++PN T+++
Sbjct: 377 LDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSV 436
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F LR + L+ M+ G P+T + L+ ++ ++ A Q+ + MV KG
Sbjct: 437 LIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKG 496
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELA 233
I ++L + C ++ + + F +M +G V++ I+ EL
Sbjct: 497 CDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELG 550
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 110/217 (50%), Gaps = 4/217 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ +I++YN LI +C + + K++ M I+P+V++++ +I G+
Sbjct: 387 MEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGK 446
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++ KEM G PD Y + I +C L A+ ++D MV KG PN T+N+
Sbjct: 447 LREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNI 506
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ +N + L+ +M G + +T + L++ K+ +A +L+ +MV +
Sbjct: 507 LINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRK 566
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHK 217
I+ +L D LCD G E+EK+ LE+ EK K
Sbjct: 567 VPPNIVTYKILLDGLCDNG---ESEKA-LEIFEKIEK 599
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 114/224 (50%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
++G +P+ ++++ LI+ C + +V +A ++V++M + PD+I+ +++ GL L G+
Sbjct: 249 KLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEA 308
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
+A ++ +M EYGC P+A Y + C + + A L+ +M E+ + +A Y++
Sbjct: 309 EAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 368
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
L +++NL+ M G N + L+ + + +L DM+++
Sbjct: 369 DGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKIN 428
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ VL D GKL EAE+ EMI +G P +++ +
Sbjct: 429 PNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSL 472
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 112/253 (44%), Gaps = 35/253 (13%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ P++V+++ LID + K+ ++ +A ++ ++M I+PD I+YTS+I G DKA
Sbjct: 427 INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKAN 486
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
++ M GC P+ +N I YC A R+ D L +M +G+ + TYN + F
Sbjct: 487 QMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGF 546
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQE--------------KVEIAL 170
L + L+ M+ PN + L+ LC E K+E+ +
Sbjct: 547 CELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDI 606
Query: 171 QLWNDMVE--------------------KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLE 210
++N ++ KG + +++ LC G L EAE F +
Sbjct: 607 GIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRK 666
Query: 211 MIEKGHKPSQVSF 223
M E GH P ++
Sbjct: 667 MEEDGHAPDGWTY 679
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 111/224 (49%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ ++ + + +I+ +C+ R++ A+ + K+ P+ I+++++I GL L G+
Sbjct: 212 MELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGR 271
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A +++ M E G PD N + C++ + +A L+D+MVE G PNA TY
Sbjct: 272 VSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGP 331
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGC-LPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
V S + L +M L + + + LCK ++ A L+N+M K
Sbjct: 332 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCK-HGSLDNAFNLFNEMEMK 390
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G + I+ ++L C+ G+ + K +MI++ P+ V+F
Sbjct: 391 GITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTF 434
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 90/193 (46%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV D V+YN LI +C+ ++ A ++ ++M + P++++Y ++ GL G+ +KA
Sbjct: 531 GVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKA 590
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++ +++++ D YN I C A ++ DA L + KG+ P TYN+
Sbjct: 591 LEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGG 650
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
L + L+ +M G P+ + L++ +++L ++ GF
Sbjct: 651 LCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVD 710
Query: 185 ILVSDVLFDLLCD 197
++ D+L D
Sbjct: 711 ASTIKMVIDMLSD 723
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 79/176 (44%), Gaps = 1/176 (0%)
Query: 56 GLVG-QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPN 114
GLV + D A D+ ++M P ++ K+ L +M KG++ N
Sbjct: 161 GLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHN 220
Query: 115 ATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWN 174
T ++ F L +++ +++ G PNT + L+ + +V AL+L +
Sbjct: 221 LYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVD 280
Query: 175 DMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALM 230
MVE G ++ + L + LC GK EA +M+E G +P+ V++ + +M
Sbjct: 281 RMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVM 336
Score = 43.9 bits (102), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 95/230 (41%), Gaps = 4/230 (1%)
Query: 23 DRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAA 82
D + + A + M P VI ++ + + Q D + K+M+ G +
Sbjct: 164 DIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYT 223
Query: 83 YNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMM 142
+ I +C ++L A M ++++ G PN T++ + + L RM+
Sbjct: 224 LSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMV 283
Query: 143 GTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKL 201
G P+ + LV LC ++ E A+ L + MVE G + + +++C G+
Sbjct: 284 EMGHKPDLITINTLVNGLCLSGKEAE-AMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQT 342
Query: 202 VEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEALQNLSNKMALFG 250
A + +M E+ K V + I L + + A NL N+M + G
Sbjct: 343 ALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAF-NLFNEMEMKG 391
>gi|357505557|ref|XP_003623067.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498082|gb|AES79285.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 647
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 125/273 (45%), Gaps = 36/273 (13%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
V P++VS N L+ CK +VE A K++++M + P+V+SYT+++GG G D A
Sbjct: 187 VLPNVVSCNILLKALCKGNEVEVAVKVLDEMPGMGLVPNVVSYTTVLGGFVWRGDMDGAM 246
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
V +E+ + G PD +Y + +C +L DA +MD M + G+ PN TY + + +
Sbjct: 247 KVFREVLDRGWSPDVTSYTVLVDGFCRLGKLVDAIRVMDIMEDNGVEPNEVTYGVMIQAY 306
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWN----------- 174
+ NL M+ + ++ C +V L + VE A ++W
Sbjct: 307 CKEKKSGEAVNLIEDMIAKDLVVGSELCCKVVDLLCEEGNVEKACEMWRMVSRKNCGLNG 366
Query: 175 ------------------------DMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLE 210
D KG + +L + L LC+ G+L EA + + +
Sbjct: 367 AVVVSTLIHWLCKKGKVLEARNVFDEFGKGSVASLLTYNTLIAGLCEGGELCEAARLWDD 426
Query: 211 MIEKGHKPSQVSFRR-IKALMELANKQEALQNL 242
M+EKG P+ ++ IK ++ N +E ++ L
Sbjct: 427 MVEKGVAPNAFTYNMLIKGFCKVGNAKEGIRVL 459
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 82/193 (42%), Gaps = 37/193 (19%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDIS------------------ 42
M + GV+P+ V+Y +I YCK+++ +A ++E M +D+
Sbjct: 287 MEDNGVEPNEVTYGVMIQAYCKEKKSGEAVNLIEDMIAKDLVVGSELCCKVVDLLCEEGN 346
Query: 43 ------------------PDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYN 84
+ +++I L G+ +AR+V E + G YN
Sbjct: 347 VEKACEMWRMVSRKNCGLNGAVVVSTLIHWLCKKGKVLEARNVFDEFGK-GSVASLLTYN 405
Query: 85 AAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGT 144
I C L +A+ L D+MVEKG++PNA TYN+ + F + + + M+
Sbjct: 406 TLIAGLCEGGELCEAARLWDDMVEKGVAPNAFTYNMLIKGFCKVGNAKEGIRVLEEMLEN 465
Query: 145 GCLPNTQSCMFLV 157
CLPN + L+
Sbjct: 466 RCLPNKSTYTILI 478
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 87/176 (49%), Gaps = 1/176 (0%)
Query: 49 TSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVE 108
++I G GL G+P +A ++ +G P + NA + + KR R A + E
Sbjct: 124 VTVIRGYGLAGKPVRALKTFLRIESFGIRPSVRSINALLNSLVQNKRYRLAFLVFKNCGE 183
Query: 109 K-GLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVE 167
+ + PN + N+ + N++ + + M G G +PN S ++ + ++
Sbjct: 184 RFRVLPNVVSCNILLKALCKGNEVEVAVKVLDEMPGMGLVPNVVSYTTVLGGFVWRGDMD 243
Query: 168 IALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
A++++ +++++G+ + VL D C +GKLV+A + M + G +P++V++
Sbjct: 244 GAMKVFREVLDRGWSPDVTSYTVLVDGFCRLGKLVDAIRVMDIMEDNGVEPNEVTY 299
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 35/59 (59%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVG 59
M E GV P+ +YN LI +CK ++ +++E+M + P+ +YT +I G+ L+G
Sbjct: 427 MVEKGVAPNAFTYNMLIKGFCKVGNAKEGIRVLEEMLENRCLPNKSTYTILIDGILLLG 485
>gi|297853022|ref|XP_002894392.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297340234|gb|EFH70651.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 525
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 115/239 (48%), Gaps = 1/239 (0%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
D+++YN L+D CK V+ AYK+ ++M + + PD S+ I A VL
Sbjct: 242 DLLAYNALLDALCKSGDVDGAYKMFQEMGNLGLKPDAYSFAIFIHSYCDASDVHSAYQVL 301
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
MK Y P+ +N I+ C +++ DA L+DEM++KG +P+ TYN
Sbjct: 302 DRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDH 361
Query: 129 NDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVS 188
++ + L RM T CLP+ + ++KL R + + ++W M E+ F +
Sbjct: 362 CEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRVTEIWEGMSERKFYPTVATY 421
Query: 189 DVLFD-LLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKM 246
V+ L+ GKL EA + F MI++G P + ++ + + + + L+ KM
Sbjct: 422 TVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEMLRNRLVGWGQMDVVDVLAGKM 480
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 104/230 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+KP + + L+ C + V A + +K + I P +Y+ ++ G +
Sbjct: 164 MVEFGIKPCVDDLDQLLHSLCDRKHVNHAQEFFDKAKGFGIVPSAKTYSILVRGWARIRD 223
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
AR V EM E C D AYNA + C + + A + EM GL P+A ++ +
Sbjct: 224 ASGARKVFDEMLENNCVVDLLAYNALLDALCKSGDVDGAYKMFQEMGNLGLKPDAYSFAI 283
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + ++D+ S++ + RM +PN + ++K + EKV+ A L ++M++KG
Sbjct: 284 FIHSYCDASDVHSAYQVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKG 343
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALM 230
+ + CD ++ A K M P + ++ + L+
Sbjct: 344 ANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLL 393
>gi|302142099|emb|CBI19302.3| unnamed protein product [Vitis vinifera]
Length = 609
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 117/227 (51%), Gaps = 1/227 (0%)
Query: 17 IDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGC 76
+ CK+ V +A K++++MR++ PDV++Y +I G+ G+ D+A L M YGC
Sbjct: 89 VQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGC 148
Query: 77 YPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWN 136
P+ +N +R+ C R DA L+ +M+ KG SP+ T+N+ L + +
Sbjct: 149 QPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAID 208
Query: 137 LYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLC 196
+ +M GC PN+ S L+ +++K++ A++ + MV +G I+ + L LC
Sbjct: 209 ILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALC 268
Query: 197 DMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNL 242
GK+ A + ++ KG P +++ I L ++ + A++ L
Sbjct: 269 KDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLL 315
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 109/224 (48%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G KPD+V+YN LI+ CK+ ++++A K + M P+VI++ I+ + G+
Sbjct: 108 MRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGR 167
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +L +M GC P +N I C L A ++++M G +PN+ +YN
Sbjct: 168 WMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNP 227
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEK 179
F + + M+ GC P+ + L LCK KV++A+++ N + K
Sbjct: 228 LLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCK-DGKVDVAVEILNQLSSK 286
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G ++ + + D L +GK A K EM KG KP +++
Sbjct: 287 GCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITY 330
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PDIV+YN L+ CKD +V+ A +I+ ++ + SP +I+Y ++I GL VG+
Sbjct: 248 MVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGK 307
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A +L EM+ G PD Y++ + ++ +A ++ G+ PNA TYN
Sbjct: 308 TERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNS 367
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
S + + M+ C P + L++ + + AL L N++ +G
Sbjct: 368 IMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRG 427
Query: 181 F 181
Sbjct: 428 L 428
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 99/223 (44%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P +V++N LI+ C+ + +A I+EKM +P+ +SY ++ G +
Sbjct: 178 MLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKK 237
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + L M GCYPD YN + C ++ A +++++ KG SP TYN
Sbjct: 238 MDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNT 297
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L M G P+ + LV R+ KV+ A++ ++D+ G
Sbjct: 298 VIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLG 357
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + + LC + A MI K KP++ ++
Sbjct: 358 IRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATY 400
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 79/197 (40%), Gaps = 3/197 (1%)
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
VGQ A +L EM+ G PD YN I C RL +A ++ M G PN T
Sbjct: 98 VGQ---AMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVIT 154
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
+N+ R + + L M+ GC P+ + L+ RQ + A+ + M
Sbjct: 155 HNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMP 214
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQE 237
G L + L C K+ A + M+ +G P V++ + + K +
Sbjct: 215 MHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVD 274
Query: 238 ALQNLSNKMALFGPSMI 254
+ N+++ G S +
Sbjct: 275 VAVEILNQLSSKGCSPV 291
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 64/144 (44%), Gaps = 2/144 (1%)
Query: 81 AAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCR 140
+ ++ ++ C + A L+DEM KG P+ TYN+ L +
Sbjct: 83 SGFSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNN 142
Query: 141 MMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMG 199
M GC PN + +++ +C ++ A +L +DM+ KG ++ ++L + LC G
Sbjct: 143 MPSYGCQPNVITHNIILRSMCSTGRWMD-AEKLLSDMLRKGCSPSVVTFNILINFLCRQG 201
Query: 200 KLVEAEKSFLEMIEKGHKPSQVSF 223
L A +M G P+ +S+
Sbjct: 202 LLGRAIDILEKMPMHGCTPNSLSY 225
>gi|357122825|ref|XP_003563115.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Brachypodium distachyon]
Length = 410
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 114/223 (51%), Gaps = 8/223 (3%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ ++VSYN LI C+ R+++ A +++E MR E I P V+++ ++ G G G+ A
Sbjct: 138 GITRNVVSYNTLIAGLCRYRKMKDATQLLELMRREGIRPSVVTFNLLVDGYGKAGKMSNA 197
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+M+ G P A YNA I +C A+ + A+ +M E+GL+P TY +
Sbjct: 198 LHFSNQMRMAGYQPSAVTYNALIAGFCRARDMIRANRAFSDMKERGLAPTKVTYTILIDA 257
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
F ND+ ++ ++ M G + ++ LV + ++ A +L+ + EKG
Sbjct: 258 FARENDMDKAFEMFAGMEKAGLEVDVRTYGVLVHALCMEGNMKDARKLFQSIGEKG---- 313
Query: 185 ILVSDVLFDLLC----DMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ V +V++D+L G +A K +EM +KG P+ S+
Sbjct: 314 LQVGNVIYDMLIYGYGREGSSYKAMKLIMEMRKKGFVPNSASY 356
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 115/249 (46%), Gaps = 14/249 (5%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G++P++ +YN L+ +C+ + E+A + E+M + I+ +V+SY ++I GL +
Sbjct: 99 MRIGGIEPNLYTYNILVGEWCRTGEFERARLLFEEMPAKGITRNVVSYNTLIAGLCRYRK 158
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +L+ M+ G P +N + Y A ++ +A ++M G P+A TYN
Sbjct: 159 MKDATQLLELMRREGIRPSVVTFNLLVDGYGKAGKMSNALHFSNQMRMAGYQPSAVTYNA 218
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + D+ + + M G P + L+ R+ ++ A +++ M + G
Sbjct: 219 LIAGFCRARDMIRANRAFSDMKERGLAPTKVTYTILIDAFARENDMDKAFEMFAGMEKAG 278
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQV--------------SFRRI 226
+ VL LC G + +A K F + EKG + V S++ +
Sbjct: 279 LEVDVRTYGVLVHALCMEGNMKDARKLFQSIGEKGLQVGNVIYDMLIYGYGREGSSYKAM 338
Query: 227 KALMELANK 235
K +ME+ K
Sbjct: 339 KLIMEMRKK 347
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 99/215 (46%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
D+ + L+ YC+ V +A ++ + M ++P+ +++T++I G + G+ +K +
Sbjct: 37 DVAACTALVHGYCRSGDVAEAQRVFDVMPRLGLTPNEVTFTALIHGYFIHGRREKGLALF 96
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
++M+ G P+ YN + +C A L +EM KG++ N +YN
Sbjct: 97 EKMRIGGIEPNLYTYNILVGEWCRTGEFERARLLFEEMPAKGITRNVVSYNTLIAGLCRY 156
Query: 129 NDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVS 188
++ + L M G P+ + LV + K+ AL N M G+ +
Sbjct: 157 RKMKDATQLLELMRREGIRPSVVTFNLLVDGYGKAGKMSNALHFSNQMRMAGYQPSAVTY 216
Query: 189 DVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ L C ++ A ++F +M E+G P++V++
Sbjct: 217 NALIAGFCRARDMIRANRAFSDMKERGLAPTKVTY 251
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 84/193 (43%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G +P V+YN LI +C+ R + +A + M++ ++P ++YT +I
Sbjct: 204 MRMAGYQPSAVTYNALIAGFCRARDMIRANRAFSDMKERGLAPTKVTYTILIDAFAREND 263
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA ++ M++ G D Y + C+ ++DA L + EKGL Y++
Sbjct: 264 MDKAFEMFAGMEKAGLEVDVRTYGVLVHALCMEGNMKDARKLFQSIGEKGLQVGNVIYDM 323
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + L M G +PN+ S +++ K A L +DMV G
Sbjct: 324 LIYGYGREGSSYKAMKLIMEMRKKGFVPNSASYGLTIRILCNDGKCSEAEALIDDMVRAG 383
Query: 181 FGSYILVSDVLFD 193
+ V VL +
Sbjct: 384 VQTSESVRQVLLN 396
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 81/189 (42%)
Query: 40 DISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDA 99
D + DV + T+++ G G +A+ V M G P+ + A I Y I R
Sbjct: 33 DTTLDVAACTALVHGYCRSGDVAEAQRVFDVMPRLGLTPNEVTFTALIHGYFIHGRREKG 92
Query: 100 SGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKL 159
L ++M G+ PN TYN+ + + + + L+ M G N S L+
Sbjct: 93 LALFEKMRIGGIEPNLYTYNILVGEWCRTGEFERARLLFEEMPAKGITRNVVSYNTLIAG 152
Query: 160 CKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
R K++ A QL M +G ++ ++L D GK+ A +M G++PS
Sbjct: 153 LCRYRKMKDATQLLELMRREGIRPSVVTFNLLVDGYGKAGKMSNALHFSNQMRMAGYQPS 212
Query: 220 QVSFRRIKA 228
V++ + A
Sbjct: 213 AVTYNALIA 221
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 76/178 (42%), Gaps = 2/178 (1%)
Query: 79 DAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLY 138
D AA A + YC + + +A + D M GL+PN T+ ++ L+
Sbjct: 37 DVAACTALVHGYCRSGDVAEAQRVFDVMPRLGLTPNEVTFTALIHGYFIHGRREKGLALF 96
Query: 139 CRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDM 198
+M G PN + LV R + E A L+ +M KG ++ + L LC
Sbjct: 97 EKMRIGGIEPNLYTYNILVGEWCRTGEFERARLLFEEMPAKGITRNVVSYNTLIAGLCRY 156
Query: 199 GKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFG--PSMI 254
K+ +A + M +G +PS V+F + A K + SN+M + G PS +
Sbjct: 157 RKMKDATQLLELMRREGIRPSVVTFNLLVDGYGKAGKMSNALHFSNQMRMAGYQPSAV 214
>gi|297839881|ref|XP_002887822.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333663|gb|EFH64081.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 407
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 111/216 (51%), Gaps = 3/216 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV D+ SY+ +D+ CK + KA K+ ++M+ I DV++Y ++I +G +
Sbjct: 179 GVPKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRIKLDVVAYNTVIRAIGASQGVEFG 238
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
V +EM+E GC P+ A +N I+ C R+RDA ++DEM +KG P++ +Y F
Sbjct: 239 IRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKKGCQPDSISYMCLFSR 298
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+++ S L+ RM+ +G P + + L++ +R ++ L +W M E G
Sbjct: 299 LEKPSEILS---LFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPD 355
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQ 220
+ + D L G L A + EMIE+G P +
Sbjct: 356 SAAYNAVIDALIQKGMLDMAREYEEEMIERGLSPRR 391
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 87/184 (47%), Gaps = 9/184 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ +K D+V+YN +I + VE ++ +MR+ P+V ++ +II L G+
Sbjct: 210 MKSRRIKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGR 269
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDAS---GLMDEMVEKGLSPNATT 117
A +L EM + GC PD+ +Y C+ RL S L M+ G+ P T
Sbjct: 270 MRDAYRMLDEMPKKGCQPDSISY------MCLFSRLEKPSEILSLFGRMIRSGVRPKMDT 323
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
Y + R F L+ ++ M +G P++ + ++ ++ +++A + +M+
Sbjct: 324 YVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMI 383
Query: 178 EKGF 181
E+G
Sbjct: 384 ERGL 387
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 99/245 (40%), Gaps = 17/245 (6%)
Query: 34 EKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIA 93
+KM E + D+ SY+ + + G+P KA + KEMK D AYN IR +
Sbjct: 173 DKMDTEGVPKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRIKLDVVAYNTVIRAIGAS 232
Query: 94 KRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSC 153
+ + + EM E+G PN T+N ++ +R ++ + M GC P++ S
Sbjct: 233 QGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKKGCQPDSISY 292
Query: 154 MFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIE 213
M L R EK L L+ M+ G + +L G L + M E
Sbjct: 293 MCLF---SRLEKPSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKE 349
Query: 214 KGHKPSQVSFRRI------KALMELANKQEALQNLSNKMALFGPSMIPKREEYLAEMSAS 267
G P ++ + K ++++A + E + + P+R L E S
Sbjct: 350 SGDTPDSAAYNAVIDALIQKGMLDMAREYEE--------EMIERGLSPRRRPELVEKSLD 401
Query: 268 DSFSC 272
++ C
Sbjct: 402 ETLVC 406
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 47/225 (20%), Positives = 87/225 (38%), Gaps = 20/225 (8%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISY----------TSIIGGLGLV 58
D S+ L+D C+ + V +A ++ +VI++ I+ G +
Sbjct: 110 DDTSFYNLVDALCEHKHVVEAEELC-------FGKNVIAHGFSVSNTKIHNLILRGWSKL 162
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
G K ++ +M G D +Y+ + C + + A L EM + + + Y
Sbjct: 163 GWWGKCKEYWDKMDTEGVPKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRIKLDVVAY 222
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
N R S + ++ M GC PN + ++KL ++ A ++ ++M +
Sbjct: 223 NTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPK 282
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
KG + LF L K E F MI G +P ++
Sbjct: 283 KGCQPDSISYMCLFSRL---EKPSEILSLFGRMIRSGVRPKMDTY 324
>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
Length = 703
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 110/220 (50%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
+++ PD V++ LI C++ KA+ I E+ R DV SY+S+I GL VG+
Sbjct: 396 KDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRL 455
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
A V ++M + GC P++ YNA I +C R DA + +M + G SP TYN
Sbjct: 456 VDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTL 515
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
+ + + ++ M+ G P+ + L++ +K++ AL +W ++ KG
Sbjct: 516 IDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGL 575
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQV 221
+++ ++L LC GK+ EA F +M EK + P +
Sbjct: 576 KVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNL 615
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 131/260 (50%), Gaps = 10/260 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+++ G +P++ +YN ++D CK + ++ ++ E+M ++ PDVI+Y +I GL G
Sbjct: 255 VKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGD 314
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A V E+ + G DAA YN+ ++ +C A R+++A D GL N TYN+
Sbjct: 315 VDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTYNI 373
Query: 121 FFRVFYWSNDLRSS---WNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
+ + S + + W+L + C+P+T + L+ + A ++ +
Sbjct: 374 MIKGLFDSGMVDEAIELWDLLEK--DVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEAR 431
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP-SQVSFRRIKALMELANKQ 236
G + + + LC++G+LV+A K + +M + G KP S + I ++
Sbjct: 432 VSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTS 491
Query: 237 EALQNLSNKMALFG--PSMI 254
+A++ + +KMA G P++I
Sbjct: 492 DAVR-IYSKMADNGCSPTVI 510
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 102/224 (45%), Gaps = 1/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G KP+ YN LI +C+ + A +I KM D SP VI+Y ++I GL +
Sbjct: 465 MDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEK 524
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A V +EM E G PD Y + IR K++ DA + +++ KGL + +N+
Sbjct: 525 YQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNI 584
Query: 121 FFRVFYWSNDLRSSWNLYCRMM-GTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ + + +++ M C PN + L+ ++ A LW + E
Sbjct: 585 LIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITED 644
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G I+ + LC ++ E + E++ +G P+ +++
Sbjct: 645 GLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITW 688
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 94/202 (46%), Gaps = 1/202 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G P +++YN LID CK + ++A + +M + +PD+ +Y S+I GL +
Sbjct: 500 MADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKK 559
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEK-GLSPNATTYN 119
D A + K++ G D +N I C A ++ +A + +M EK PN TYN
Sbjct: 560 IDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYN 619
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
Y + + + L+ + G P+ S +K +++ +QL ++++ +
Sbjct: 620 TLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSR 679
Query: 180 GFGSYILVSDVLFDLLCDMGKL 201
G ++ ++L + G +
Sbjct: 680 GIIPTVITWNILVRAVIKYGPI 701
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 106/236 (44%), Gaps = 1/236 (0%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ P++ +YN ++ C +++A + + +R ++PD I+Y++++ GL + D A
Sbjct: 154 IAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHAL 213
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMV-EKGLSPNATTYNLFFRV 124
D+L EM G PD YNA + A + D++V + G PN TYN+
Sbjct: 214 DLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDG 273
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ ++ RM+ P+ + L+ R V+ A ++++++++ G
Sbjct: 274 LCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVID 333
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ + L C G++ EA K + G + + IK L + EA++
Sbjct: 334 AAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIE 389
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 107/226 (47%), Gaps = 5/226 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+R V PD ++Y+ L+ K +++ A ++++M + PDV+ Y +++GG G+
Sbjct: 184 LRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNALLGGCFKAGE 243
Query: 61 PDKARDVL-KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+K V K +K+ G P+ A YN + C R ++ + + MV L P+ TY
Sbjct: 244 FEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYG 303
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ S D+ + +Y ++ TG + + LVK + +V+ A + W+
Sbjct: 304 ILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFA 363
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHK--PSQVSF 223
G + + +++ L D G + EA + +++EK P V+F
Sbjct: 364 GLRN-LRTYNIMIKGLFDSGMVDEAIE-LWDLLEKDVACIPDTVTF 407
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 92/218 (42%), Gaps = 7/218 (3%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRD----EDISPDVISYTSIIGGLGLVG 59
+G P I S+N L+D + + R+ A + I+P++ +Y ++ L G
Sbjct: 113 LGCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARG 172
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
D+A + ++ PD Y+ + RL A L+DEM G+ P+ YN
Sbjct: 173 DLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYN 232
Query: 120 LFFRVFYWSNDLRSSWNLYCRMM-GTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMV 177
+ + + ++ +++ G PN + + L LCK E+ ++W MV
Sbjct: 233 ALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVG-EVWERMV 291
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
++ +L LC G + A + + E+I+ G
Sbjct: 292 ANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTG 329
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 76/169 (44%), Gaps = 1/169 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G PDI +Y LI D++++ A I +++ + + DV+ + +I GL G+
Sbjct: 535 MVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGK 594
Query: 61 PDKARDVLKEMKEY-GCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
D+A V +MKE C P+ YN + + A+ L + E GL P+ +YN
Sbjct: 595 VDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYN 654
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEI 168
+ + + L ++ G +P + LV+ + +++
Sbjct: 655 TRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYGPIQV 703
>gi|115458614|ref|NP_001052907.1| Os04g0446100 [Oryza sativa Japonica Group]
gi|38344550|emb|CAD40961.2| OSJNBa0027P08.18 [Oryza sativa Japonica Group]
gi|113564478|dbj|BAF14821.1| Os04g0446100 [Oryza sativa Japonica Group]
Length = 583
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 103/199 (51%), Gaps = 1/199 (0%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
PD+ S+N +I C+ QV+KA ++VE+M + SPD +++ ++ GL + + +
Sbjct: 248 SPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHE 307
Query: 67 VLKEMKEYG-CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
VL+ ++ G C P+ + + I YC A +L DA + ++MV G+ PN TYN+ +
Sbjct: 308 VLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGY 367
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
DL S+ +Y +M C P+ + L+ R +++ AL++W+DM + +
Sbjct: 368 GKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNV 427
Query: 186 LVSDVLFDLLCDMGKLVEA 204
++ LC + EA
Sbjct: 428 YTFSIIIHSLCKQNRSDEA 446
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 103/225 (45%), Gaps = 2/225 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKM-RDEDISPDVISYTSIIGGLGLVG 59
M E G PD V++N L+D C+ +V + ++++ ++ RD P+V+++TS+I G G
Sbjct: 277 MNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAG 336
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ + A V +M G P+ YN I Y L A + +M P+ T++
Sbjct: 337 KLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFS 396
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDM-VE 178
+ L + ++ M PN + ++ +Q + + A+ L N++ +
Sbjct: 397 SLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIGLLNELNLR 456
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + + D+LC GK+ EA M EKG +P + ++
Sbjct: 457 PDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTY 501
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 65/123 (52%), Gaps = 1/123 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMR-DEDISPDVISYTSIIGGLGLVG 59
M + ++P++ +++ +I CK + ++A ++ ++ DI+P Y +I L G
Sbjct: 418 MAQHRIQPNVYTFSIIIHSLCKQNRSDEAIGLLNELNLRPDIAPQAFIYNPVIDVLCKCG 477
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ D+A + K M+E GC PD Y I YC+ R+ +A EMVE G SP++ T N
Sbjct: 478 KVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVN 537
Query: 120 LFF 122
F
Sbjct: 538 CFI 540
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 88/181 (48%), Gaps = 1/181 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ P+ V+YN LI+ Y K + A ++ ++M PDV++++S+I G GQ
Sbjct: 348 MVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQ 407
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEM-VEKGLSPNATTYN 119
D A + +M ++ P+ ++ I + C R +A GL++E+ + ++P A YN
Sbjct: 408 LDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIGLLNELNLRPDIAPQAFIYN 467
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
V + + + M GC P+ + L+ + ++ A+ +++MVE
Sbjct: 468 PVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEA 527
Query: 180 G 180
G
Sbjct: 528 G 528
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/258 (20%), Positives = 101/258 (39%), Gaps = 38/258 (14%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDE-DISPDVISYTSIIGGLGLVGQPD 62
+ + P S +I V C+ + A ++ ++M SPD + ++ D
Sbjct: 138 LSITPSAHSCQQIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLSFLVSSCTCANLLD 197
Query: 63 KARDVLKEMKEYGCYPDAAAY------------------------------------NAA 86
+ +L + E+GC +A AY N
Sbjct: 198 ASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVV 257
Query: 87 IRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG- 145
I+ C +++ A L++ M E G SP+ T+N+ +N++ + R+ G
Sbjct: 258 IKGVCRVGQVQKALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGV 317
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
C+PN + ++ + K+E A+ ++NDMV G + +VL + +G L A
Sbjct: 318 CMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAV 377
Query: 206 KSFLEMIEKGHKPSQVSF 223
+ + +M P V+F
Sbjct: 378 EVYQQMTRLRCPPDVVTF 395
Score = 40.4 bits (93), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 33/69 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G +PD +Y LI YC ++ +A +M + SPD I+ I L G
Sbjct: 489 MEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAGM 548
Query: 61 PDKARDVLK 69
P++ V++
Sbjct: 549 PNEVDHVMR 557
>gi|255660852|gb|ACU25595.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 418
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 111/222 (50%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G++P +VS+N LI+ Y K +++ +++ M PDV +Y+ +I GL G+ D+A
Sbjct: 166 GLRPSVVSFNTLINGYIKLGDLDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEA 225
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++ EM + G P+ + I +C +++ A + +M+ +GLSP+ TYN
Sbjct: 226 NELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYG 285
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+L+ +L M+ G P+ S L+ ++ +EIAL+L N M+++
Sbjct: 286 LCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCKEGDLEIALELRNKMIQESIRLD 345
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ L LC G+ +AEK EM+ G KP ++ I
Sbjct: 346 DVAYTALISCLCREGRASDAEKMLREMLSVGLKPDNGTYTMI 387
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 74/150 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ PD+++YN LI CK ++++ + ++++M + PD ISYT++I G G
Sbjct: 267 MLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCKEGD 326
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A ++ +M + D AY A I C R DA ++ EM+ GL P+ TY +
Sbjct: 327 LEIALELRNKMIQESIRLDDVAYTALISCLCREGRASDAEKMLREMLSVGLKPDNGTYTM 386
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNT 150
F D +++ L M G LP
Sbjct: 387 IINEFCKKRDSKTASKLLREMQRDGPLPGV 416
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 78/196 (39%), Gaps = 35/196 (17%)
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
D KE+ E G +N ++ +C +R A + D + + GL P+ ++N +
Sbjct: 122 DFYKEVLECGYPASLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGY 181
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCK----------------------- 161
DL + L M +G P+ + L+ LCK
Sbjct: 182 IKLGDLDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNG 241
Query: 162 -----------RQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLE 210
+ EKV++A++++ M+ +G ++ + L LC G+L + E
Sbjct: 242 VTFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDE 301
Query: 211 MIEKGHKPSQVSFRRI 226
MI G KP ++S+ +
Sbjct: 302 MIMNGLKPDKISYTTL 317
>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
Length = 500
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 118/258 (45%), Gaps = 35/258 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD+ +Y +I C + ++ +A K +E+M + +++P+V++YT +I GL G+
Sbjct: 37 MVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGR 96
Query: 61 PD----------------------------------KARDVLKEMKEYGCYPDAAAYNAA 86
D +A D+L+EM GC PD Y
Sbjct: 97 VDEAVALLSKMRKKCVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTL 156
Query: 87 IRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG- 145
I +C +K+ DA + +++V +G P+ TY+ L+ + +L+ RM+ +G
Sbjct: 157 ITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGS 216
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
C+PNT + L+ R K++ A+ L M E G ++ L + C + +L +A
Sbjct: 217 CMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAY 276
Query: 206 KSFLEMIEKGHKPSQVSF 223
+M KG P V+F
Sbjct: 277 DLLNQMTRKGLTPDVVTF 294
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 120/245 (48%), Gaps = 2/245 (0%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
D V+Y LI CK +++E+A + KM + PDV +YT++I L + + +AR L
Sbjct: 10 DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL 69
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
+EM P+ Y I C R+ +A L+ +M +K + P A TYN +
Sbjct: 70 EEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKA 128
Query: 129 NDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVS 188
+++L M+ +GC+P+ + L+ + +K + AL+++ +V +GF ++
Sbjct: 129 ERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTY 188
Query: 189 DVLFDLLCDMGKLVEAEKSFLEMIEKGH-KPSQVSFRRIKALMELANKQEALQNLSNKMA 247
L D LC G+L EA F MI+ G P+ V++ + + K + NL +MA
Sbjct: 189 SCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMA 248
Query: 248 LFGPS 252
G S
Sbjct: 249 ETGSS 253
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 115/238 (48%), Gaps = 4/238 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PDI +Y LI +CK ++ + A ++ E++ PDV++Y+ +I GL G+ +A
Sbjct: 145 GCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEA 204
Query: 65 RDVLKEMKEYG-CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
D+ M + G C P+ YN+ I +C ++ +A L++ M E G SP+ TY
Sbjct: 205 IDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMN 264
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
F L +++L +M G P+ + L+ R+ ++ A+ + +M K
Sbjct: 265 GFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSP 324
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEALQ 240
+ + + D C +L EA K LE E P+ VSF I+ L ++ EA++
Sbjct: 325 TVYTYNTILDGYCRANQLEEARKFMLE--EMDCPPNVVSFNIMIRGLCKVNRSSEAME 380
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 111/218 (50%), Gaps = 5/218 (2%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P+ V+YN LI +C+ ++++A ++E+M + SPDV++YT+++ G + + D A D+
Sbjct: 219 PNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDL 278
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L +M G PD + + + C RL DA ++ EM K SP TYN +
Sbjct: 279 LNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCR 338
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+N L + M C PN S +++ LCK E A++L + + ++
Sbjct: 339 ANQLEEARKFMLEEM--DCPPNVVSFNIMIRGLCKVNRSSE-AMELVEEARRRRCNPDVV 395
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEK-GHKPSQVSF 223
+ + D LC K+ EA + + +M+E+ G P+ +++
Sbjct: 396 MYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITY 433
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 99/220 (45%), Gaps = 1/220 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P V+YN LI CK + +AY ++E+M PD+ +YT++I G + D A V
Sbjct: 113 PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 172
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKG-LSPNATTYNLFFRVFY 126
+++ G PD Y+ I C RL++A L M++ G PN TYN F
Sbjct: 173 FEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFC 232
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+ + NL RM TG P+ + L+ + +++ A L N M KG ++
Sbjct: 233 RMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVV 292
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
L D LC +L +A EM K P+ ++ I
Sbjct: 293 TFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTI 332
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 117/251 (46%), Gaps = 7/251 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G PD+V+Y L++ +CK +++ AY ++ +M + ++PDV+++TS++ GL +
Sbjct: 247 MAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENR 306
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +L EM+ C P YN + YC A +L +A M E E PN ++N+
Sbjct: 307 LSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLE--EMDCPPNVVSFNI 364
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK- 179
R N + L C P+ ++ R++KV+ A +++ M+E+
Sbjct: 365 MIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEP 424
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
G + L LC+ G L A IEKG P+ ++ + AN+ E
Sbjct: 425 GCLPNSITYSTLITGLCNAGMLDRARG----YIEKGCVPNIGTYNLLIDAFRKANRDEDA 480
Query: 240 QNLSNKMALFG 250
+ L + M G
Sbjct: 481 RELLDDMVQRG 491
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 95/184 (51%), Gaps = 7/184 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR P + +YN ++D YC+ Q+E+A K + + + D P+V+S+ +I GL V +
Sbjct: 317 MRRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDCPPNVVSFNIMIRGLCKVNR 374
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEK-GLSPNATTYN 119
+A ++++E + C PD Y I C K++ +A + +M+E+ G PN+ TY+
Sbjct: 375 SSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYS 434
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ L + + GC+PN + L+ ++ + E A +L +DMV++
Sbjct: 435 TLITGLCNAGMLDRARGY----IEKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQR 490
Query: 180 GFGS 183
GFG
Sbjct: 491 GFGG 494
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 59/149 (39%), Gaps = 3/149 (2%)
Query: 76 CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSW 135
C D Y + I+ C KRL A + +MV KG P+ TY N L +
Sbjct: 7 CSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEAR 66
Query: 136 NLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDL 194
M PN + L+ LCK +V+ A+ L + M +K + + + L
Sbjct: 67 KFLEEMANRNLTPNVVTYTVLIDGLCK-GGRVDEAVALLSKMRKKCVPTAVTYNS-LISG 124
Query: 195 LCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
LC + EA EM+ G P ++
Sbjct: 125 LCKAERASEAYDLLEEMVYSGCIPDIFTY 153
>gi|414875981|tpg|DAA53112.1| TPA: hypothetical protein ZEAMMB73_920038 [Zea mays]
Length = 574
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 117/226 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ PD+V++N LI+ YCK+ + A K+ ++MR + I +V++Y S++ GL G+
Sbjct: 252 MIQAGISPDVVTFNVLINGYCKEPNITAAIKVFQEMRQQGIPANVVTYNSLVSGLCREGK 311
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ + +++EM+E G + N+ + +C + +A G +D + ++G+ PN TYN
Sbjct: 312 VEDSIKLVEEMEELGLACILSTMNSVLNGFCKKGMMVEAEGWVDGIAQRGMKPNVITYNT 371
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ + M G G PN ++ L+ L ++M EKG
Sbjct: 372 LVDGYRRLGKMKEAAAAKDAMAGKGISPNVKTYNCLITGFTTSRDWRSVSGLLDEMKEKG 431
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ ++ +VL LC G++ +A K EM+E G +P V++ I
Sbjct: 432 VKADVVTYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHVAYNTI 477
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 104/223 (46%), Gaps = 3/223 (1%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
+P S N L+ + +V+ A + +SPD+ ++ +I G GQ KA D
Sbjct: 150 RPSAFSVNALLAALVRADRVDLADRAFRAALRRRVSPDLFTFNIVISGFCKTGQLRKAGD 209
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYC---IAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
V K + +G P A YN I YC ++ L+ EM++ G+SP+ T+N+
Sbjct: 210 VAKNISAWGVAPSVATYNTLIDGYCKRGQVGKMYHVDALLKEMIQAGISPDVVTFNVLIN 269
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
+ ++ ++ ++ M G N + LV R+ KVE +++L +M E G
Sbjct: 270 GYCKEPNITAAIKVFQEMRQQGIPANVVTYNSLVSGLCREGKVEDSIKLVEEMEELGLAC 329
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + + + C G +VEAE + ++G KP+ +++ +
Sbjct: 330 ILSTMNSVLNGFCKKGMMVEAEGWVDGIAQRGMKPNVITYNTL 372
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 117/265 (44%), Gaps = 35/265 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRD---------------------- 38
MR+ G+ ++V+YN L+ C++ +VE + K+VE+M +
Sbjct: 287 MRQQGIPANVVTYNSLVSGLCREGKVEDSIKLVEEMEELGLACILSTMNSVLNGFCKKGM 346
Query: 39 -------------EDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNA 85
+ P+VI+Y +++ G +G+ +A M G P+ YN
Sbjct: 347 MVEAEGWVDGIAQRGMKPNVITYNTLVDGYRRLGKMKEAAAAKDAMAGKGISPNVKTYNC 406
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
I + ++ R SGL+DEM EKG+ + TYN+ ++R + L M+ G
Sbjct: 407 LITGFTTSRDWRSVSGLLDEMKEKGVKADVVTYNVLIGALCCKGEVRKAVKLLDEMVEVG 466
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
P + ++ + + A ++ M ++ + ++ +V C MGK+ EA
Sbjct: 467 LEPKHVAYNTIINGFCEKGDAQGAHEIRLRMEKRKKRANVVTYNVFLKYFCKMGKMDEAN 526
Query: 206 KSFLEMIEKGHKPSQVSFRRIKALM 230
EM+EKG P+++++ I + M
Sbjct: 527 VVLNEMLEKGLVPNRITYEIINSGM 551
>gi|449435418|ref|XP_004135492.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Cucumis sativus]
gi|449494962|ref|XP_004159696.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Cucumis sativus]
Length = 514
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 98/183 (53%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
D VSYN +I CK KAY++ E+M +D++PDV ++ ++I + G P A+ +L
Sbjct: 322 DTVSYNTVIGALCKSFATRKAYRLFEEMGQKDVAPDVGTFATLIKAFLIEGSPHIAKGLL 381
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
+ M + PD Y + +C +++ A G+ +M+E G+SP+ +YN +
Sbjct: 382 QTMTQTVLIPDLIFYTTVVDYFCKTRKIEMAQGVFRDMIEIGISPDVVSYNALINGLCKA 441
Query: 129 NDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVS 188
+ + + LY M GC P+ + ++ R++++ +A Q+W+ M+EKG+ +S
Sbjct: 442 SKVSEAMLLYEEMQIRGCYPDEVTFKLIIGGLLRKKELSLACQVWDQMMEKGYTLDKFLS 501
Query: 189 DVL 191
+ L
Sbjct: 502 ETL 504
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 111/226 (49%), Gaps = 1/226 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G +PD+++YN L++ +C +E A K ++KM + PDV SY ++ GL +
Sbjct: 245 MSKHGCEPDLITYNILLNFFCDGLMLELAGKSMKKMERIGMEPDVYSYNQLLKGLCKANR 304
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA ++ M E G D +YN I C + R A L +EM +K ++P+ T+
Sbjct: 305 LDKAYKLMNTMWEKG-LCDTVSYNTVIGALCKSFATRKAYRLFEEMGQKDVAPDVGTFAT 363
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ F + L M T +P+ +V + K+E+A ++ DM+E G
Sbjct: 364 LIKAFLIEGSPHIAKGLLQTMTQTVLIPDLIFYTTVVDYFCKTRKIEMAQGVFRDMIEIG 423
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ + L + LC K+ EA + EM +G P +V+F+ I
Sbjct: 424 ISPDVVSYNALINGLCKASKVSEAMLLYEEMQIRGCYPDEVTFKLI 469
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 105/237 (44%), Gaps = 20/237 (8%)
Query: 13 YNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIG----GLGLVGQPDKARDVL 68
+N L+ +CK ++ KA I M PD+I+Y ++ GL L + A +
Sbjct: 222 FNSLMSGFCKSGRISKALAIKSFMSKHGCEPDLITYNILLNFFCDGLML----ELAGKSM 277
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
K+M+ G PD +YN ++ C A RL A LM+ M EKGL + +YN S
Sbjct: 278 KKMERIGMEPDVYSYNQLLKGLCKANRLDKAYKLMNTMWEKGLC-DTVSYNTVIGALCKS 336
Query: 129 NDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVS 188
R ++ L+ M P+ + L+K + IA L M + +L+
Sbjct: 337 FATRKAYRLFEEMGQKDVAPDVGTFATLIKAFLIEGSPHIAKGLLQTMTQT-----VLIP 391
Query: 189 DVLF-----DLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
D++F D C K+ A+ F +MIE G P VS+ I L + + EA+
Sbjct: 392 DLIFYTTVVDYFCKTRKIEMAQGVFRDMIEIGISPDVVSYNALINGLCKASKVSEAM 448
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 62/112 (55%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + + PD++ Y ++D +CK R++E A + M + ISPDV+SY ++I GL +
Sbjct: 384 MTQTVLIPDLIFYTTVVDYFCKTRKIEMAQGVFRDMIEIGISPDVVSYNALINGLCKASK 443
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLS 112
+A + +EM+ GCYPD + I K L A + D+M+EKG +
Sbjct: 444 VSEAMLLYEEMQIRGCYPDEVTFKLIIGGLLRKKELSLACQVWDQMMEKGYT 495
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 110/266 (41%), Gaps = 37/266 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+++G PDI ++N +++ ++ +E A K ++M + PDV++YT I+ L Q
Sbjct: 105 MKQLGYLPDIWAFNIYLNLLFRENLLELALKFFDEMVAKGREPDVVTYTIIVDRLCKAKQ 164
Query: 61 PDKARDVLKEMKEYGCYPDAAA-----------------------------------YNA 85
DKA + + M G PD A +N+
Sbjct: 165 YDKAVEFWRCMVNKGLSPDMKACTALVVGLCDGGKVDLAYELTVGEMKGEMKFNNLIFNS 224
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
+ +C + R+ A + M + G P+ TYN+ F L + +M G
Sbjct: 225 LMSGFCKSGRISKALAIKSFMSKHGCEPDLITYNILLNFFCDGLMLELAGKSMKKMERIG 284
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
P+ S L+K + +++ A +L N M EKG + + V+ LC +A
Sbjct: 285 MEPDVYSYNQLLKGLCKANRLDKAYKLMNTMWEKGLCDTVSYNTVI-GALCKSFATRKAY 343
Query: 206 KSFLEMIEKGHKPSQVSFRR-IKALM 230
+ F EM +K P +F IKA +
Sbjct: 344 RLFEEMGQKDVAPDVGTFATLIKAFL 369
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 74/177 (41%), Gaps = 2/177 (1%)
Query: 26 VEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNA 85
+++A +I ++M D Y IG L + D A M G Y+
Sbjct: 25 IDEAIRIFDEMTQSDCPVTSRDYNRFIGVLISRSRFDLAESYYSRMIPQGFSLTPFTYSR 84
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
I C K L+++M + G P+ +N++ + + N L + + M+ G
Sbjct: 85 FISALCEIKNFGLIGRLLEDMKQLGYLPDIWAFNIYLNLLFRENLLELALKFFDEMVAKG 144
Query: 146 CLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKL 201
P+ + +V +LCK ++ + A++ W MV KG + L LCD GK+
Sbjct: 145 REPDVVTYTIIVDRLCKAKQ-YDKAVEFWRCMVNKGLSPDMKACTALVVGLCDGGKV 200
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 67/161 (41%)
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
VG D+A + EM + C + YN I R A M+ +G S T
Sbjct: 22 VGLIDEAIRIFDEMTQSDCPVTSRDYNRFIGVLISRSRFDLAESYYSRMIPQGFSLTPFT 81
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
Y+ F + L M G LP+ + + L R+ +E+AL+ +++MV
Sbjct: 82 YSRFISALCEIKNFGLIGRLLEDMKQLGYLPDIWAFNIYLNLLFRENLLELALKFFDEMV 141
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
KG ++ ++ D LC + +A + + M+ KG P
Sbjct: 142 AKGREPDVVTYTIIVDRLCKAKQYDKAVEFWRCMVNKGLSP 182
Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 90/236 (38%), Gaps = 2/236 (0%)
Query: 12 SYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEM 71
+Y+ I C+ + +++E M+ PD+ ++ + L + A EM
Sbjct: 81 TYSRFISALCEIKNFGLIGRLLEDMKQLGYLPDIWAFNIYLNLLFRENLLELALKFFDEM 140
Query: 72 KEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDL 131
G PD Y + C AK+ A MV KGLSP+ +
Sbjct: 141 VAKGREPDVVTYTIIVDRLCKAKQYDKAVEFWRCMVNKGLSPDMKACTALVVGLCDGGKV 200
Query: 132 RSSWNLYC-RMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDV 190
++ L M G N + CK ++ AL + + M + G ++ ++
Sbjct: 201 DLAYELTVGEMKGEMKFNNLIFNSLMSGFCK-SGRISKALAIKSFMSKHGCEPDLITYNI 259
Query: 191 LFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKM 246
L + CD L A KS +M G +P S+ ++ + AN+ + L N M
Sbjct: 260 LLNFFCDGLMLELAGKSMKKMERIGMEPDVYSYNQLLKGLCKANRLDKAYKLMNTM 315
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 63/147 (42%), Gaps = 4/147 (2%)
Query: 82 AYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRM 141
+ A+I + +A + DEM + + YN F V + + + Y RM
Sbjct: 11 VFRASITKCVKVGLIDEAIRIFDEMTQSDCPVTSRDYNRFIGVLISRSRFDLAESYYSRM 70
Query: 142 M--GTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMG 199
+ G P T S F+ LC+ + I +L DM + G+ I ++ +LL
Sbjct: 71 IPQGFSLTPFTYS-RFISALCEIKNFGLIG-RLLEDMKQLGYLPDIWAFNIYLNLLFREN 128
Query: 200 KLVEAEKSFLEMIEKGHKPSQVSFRRI 226
L A K F EM+ KG +P V++ I
Sbjct: 129 LLELALKFFDEMVAKGREPDVVTYTII 155
>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
Length = 500
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 118/258 (45%), Gaps = 35/258 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD+ +Y +I C + ++ +A K +E+M + +++P+V++YT +I GL G+
Sbjct: 37 MVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGR 96
Query: 61 PD----------------------------------KARDVLKEMKEYGCYPDAAAYNAA 86
D +A D+L+EM GC PD Y
Sbjct: 97 VDEAVALLSKMRKKCVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTL 156
Query: 87 IRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG- 145
I +C +K+ DA + +++V +G P+ TY+ L+ + +L+ RM+ +G
Sbjct: 157 ITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGS 216
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
C+PNT + L+ R K++ A+ L M E G ++ L + C + +L +A
Sbjct: 217 CMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAY 276
Query: 206 KSFLEMIEKGHKPSQVSF 223
+M KG P V+F
Sbjct: 277 DLLNQMTRKGLTPDVVTF 294
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 120/245 (48%), Gaps = 2/245 (0%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
D V+Y LI CK +++E+A + KM + PDV +YT++I L + + +AR L
Sbjct: 10 DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL 69
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
+EM P+ Y I C R+ +A L+ +M +K + P A TYN +
Sbjct: 70 EEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKA 128
Query: 129 NDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVS 188
+++L M+ +GC+P+ + L+ + +K + AL+++ +V +GF ++
Sbjct: 129 ERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTY 188
Query: 189 DVLFDLLCDMGKLVEAEKSFLEMIEKGH-KPSQVSFRRIKALMELANKQEALQNLSNKMA 247
L D LC G+L EA F MI+ G P+ V++ + + K + NL +MA
Sbjct: 189 SCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMA 248
Query: 248 LFGPS 252
G S
Sbjct: 249 ETGSS 253
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 115/238 (48%), Gaps = 4/238 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PDI +Y LI +CK ++ + A ++ E++ PDV++Y+ +I GL G+ +A
Sbjct: 145 GCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEA 204
Query: 65 RDVLKEMKEYG-CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
D+ M + G C P+ YN+ I +C ++ +A L++ M E G SP+ TY
Sbjct: 205 IDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMN 264
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
F L +++L +M G P+ + L+ R+ ++ A+ + +M K
Sbjct: 265 GFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSP 324
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEALQ 240
+ + + D C +L EA K LE E P+ VSF I+ L ++ EA++
Sbjct: 325 TVYTYNTILDGYCRANQLEEARKFMLE--EMDCPPNVVSFNIMIRGLCKVNRSSEAME 380
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 111/218 (50%), Gaps = 5/218 (2%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P+ V+YN LI +C+ ++++A ++E+M + SPDV++YT+++ G + + D A D+
Sbjct: 219 PNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDL 278
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L +M G PD + + + C RL DA ++ EM K SP TYN +
Sbjct: 279 LNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCR 338
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+N L + M C PN S +++ LCK E A++L + + ++
Sbjct: 339 ANQLEEARKFMLEEM--DCPPNVVSFNIMIRGLCKVNRSSE-AMELVEEARRRRCNPDVV 395
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEK-GHKPSQVSF 223
+ + D LC K+ EA + + +M+E+ G P+ +++
Sbjct: 396 MYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITY 433
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 99/220 (45%), Gaps = 1/220 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P V+YN LI CK + +AY ++E+M PD+ +YT++I G + D A V
Sbjct: 113 PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 172
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKG-LSPNATTYNLFFRVFY 126
+++ G PD Y+ I C RL++A L M++ G PN TYN F
Sbjct: 173 FEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFC 232
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+ + NL RM TG P+ + L+ + +++ A L N M KG ++
Sbjct: 233 RMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVV 292
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
L D LC +L +A EM K P+ ++ I
Sbjct: 293 TFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTI 332
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 120/259 (46%), Gaps = 7/259 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G PD+V+Y L++ +CK +++ AY ++ +M + ++PDV+++TS++ GL +
Sbjct: 247 MAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENR 306
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +L EM+ C P YN + YC A +L +A M E E PN ++N+
Sbjct: 307 LSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLE--EMDCPPNVVSFNI 364
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK- 179
R N + L C P+ ++ R++KV+ A +++ M+E+
Sbjct: 365 MIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEP 424
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
G + L LC+ G L A IEKG P+ ++ + AN+ E
Sbjct: 425 GCLPNSITYSTLVTGLCNAGMLDRARG----YIEKGCVPNIGTYNLLIDAFRKANRDEDA 480
Query: 240 QNLSNKMALFGPSMIPKRE 258
+ L + M G ++ +
Sbjct: 481 RELLDDMVQRGFGVVQSHQ 499
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 59/149 (39%), Gaps = 3/149 (2%)
Query: 76 CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSW 135
C D Y + I+ C KRL A + +MV KG P+ TY N L +
Sbjct: 7 CSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEAR 66
Query: 136 NLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDL 194
M PN + L+ LCK +V+ A+ L + M +K + + + L
Sbjct: 67 KFLEEMANRNLTPNVVTYTVLIDGLCK-GGRVDEAVALLSKMRKKCVPTAVTYNS-LISG 124
Query: 195 LCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
LC + EA EM+ G P ++
Sbjct: 125 LCKAERASEAYDLLEEMVYSGCIPDIFTY 153
>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
Length = 570
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 119/247 (48%), Gaps = 3/247 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD+V+ + +ID CK ++ A +I + M ++P+ + Y+++I GL +
Sbjct: 296 MTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARK 355
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A ++L +MK+ C PD YN I C + + A DEM+E G P+ TYN+
Sbjct: 356 MDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNI 415
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
F + + ++ ++ M + C PN + L+ LCKR++ + +L + M E+
Sbjct: 416 LVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASL-YFQHMKER 474
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
G V L D LC GKL F EM G SQ R I L + AN+ +
Sbjct: 475 GCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQTRTRLIFHLCK-ANRVDEA 533
Query: 240 QNLSNKM 246
+L N +
Sbjct: 534 VSLFNAI 540
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 106/220 (48%), Gaps = 2/220 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G P I +YN L++ CK ++E+A ++ K+ D +PDV++YTS+I GLG + +A
Sbjct: 195 GCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEA 254
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ KEM G D Y A IR A ++ AS + M +G P+ T +
Sbjct: 255 YKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDG 314
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGS 183
+ + ++ ++ M G PN L+ LCK + K++ AL++ M +
Sbjct: 315 LCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKAR-KMDCALEMLAQMKKAFCTP 373
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ ++L D LC G + A F EM+E G KP ++
Sbjct: 374 DTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTY 413
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 102/220 (46%), Gaps = 2/220 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PD+V+Y LID K+++ +AYK+ ++M + D + YT++I GL G+ +A
Sbjct: 230 GCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQA 289
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
V K M GC PD + I C A R+ A + M +GL+PN Y+
Sbjct: 290 SSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHG 349
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGS 183
+ + + + +M C P+T + L+ LCK + VE A +++M+E G
Sbjct: 350 LCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGD-VEAARAFFDEMLEAGCKP 408
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ ++L C G A F +M P+ V++
Sbjct: 409 DVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTY 448
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 105/219 (47%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G DI +Y ++D K+++++ A ++EK+ +P + +Y +++ GL +G+ ++A
Sbjct: 160 GCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEA 219
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
D+L+++ + GC PD Y + I KR +A L EM +GL + Y R
Sbjct: 220 IDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRG 279
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + + ++Y M GC+P+ + ++ + ++ A++++ M +G
Sbjct: 280 LLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPN 339
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+V L LC K+ A + +M + P +++
Sbjct: 340 EVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITY 378
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 100/217 (46%), Gaps = 1/217 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMR-DEDISPDVISYTSIIGGLGLVGQPDKARD 66
PD+ ++N LI YC R+ E+A+ ++ +M D ++P + ++ ++ GL G+ A D
Sbjct: 92 PDVETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMD 151
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
+ GC D Y A + K+++DA LM+++ G +P TYN
Sbjct: 152 HFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLC 211
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
L + +L +++ GC P+ + L+ ++++ A +L+ +M +G +
Sbjct: 212 KMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTV 271
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
L L GK+ +A + M +G P V+
Sbjct: 272 CYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTL 308
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 116/260 (44%), Gaps = 6/260 (2%)
Query: 1 MREM----GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLG 56
+REM GV P + ++N ++ CK +V A E + D+ +YT+I+ L
Sbjct: 117 IREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLA 176
Query: 57 LVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNAT 116
+ A +++++ GC P A YNA + C RL +A L+ ++V+ G +P+
Sbjct: 177 KNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVV 236
Query: 117 TYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDM 176
TY ++ L+ M G + +T L++ + K+ A ++ M
Sbjct: 237 TYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTM 296
Query: 177 VEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQ 236
+G ++ + D LC G++ A + F M +G P++V + + + A K
Sbjct: 297 TSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKM 356
Query: 237 E-ALQNLSN-KMALFGPSMI 254
+ AL+ L+ K A P I
Sbjct: 357 DCALEMLAQMKKAFCTPDTI 376
>gi|15220166|ref|NP_178170.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75264854|sp|Q9M8M3.1|PP136_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g80550, mitochondrial; Flags: Precursor
gi|6730729|gb|AAF27119.1|AC018849_7 unknown protein; 31926-33272 [Arabidopsis thaliana]
gi|332198297|gb|AEE36418.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 448
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 111/216 (51%), Gaps = 3/216 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV D+ SY+ +D+ CK + KA K+ ++M+ + DV++Y ++I +G +
Sbjct: 219 GVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFG 278
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
V +EM+E GC P+ A +N I+ C R+RDA ++DEM ++G P++ TY F
Sbjct: 279 IRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSR 338
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+++ S L+ RM+ +G P + + L++ +R ++ L +W M E G
Sbjct: 339 LEKPSEILS---LFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPD 395
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQ 220
+ + D L G L A + EMIE+G P +
Sbjct: 396 SAAYNAVIDALIQKGMLDMAREYEEEMIERGLSPRR 431
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 100/247 (40%), Gaps = 21/247 (8%)
Query: 34 EKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIA 93
+KM E ++ D+ SY+ + + G+P KA + KEMK D AYN IR +
Sbjct: 213 KKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGAS 272
Query: 94 KRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPN--TQ 151
+ + + EM E+G PN T+N ++ +R ++ + M GC P+ T
Sbjct: 273 QGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITY 332
Query: 152 SCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEM 211
C+F R EK L L+ M+ G + +L G L + M
Sbjct: 333 MCLF-----SRLEKPSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTM 387
Query: 212 IEKGHKPSQVSFRRI------KALMELANKQEALQNLSNKMALFGPSMIPKREEYLAEMS 265
E G P ++ + K ++++A + E + + P+R L E S
Sbjct: 388 KESGDTPDSAAYNAVIDALIQKGMLDMAREYEE--------EMIERGLSPRRRPELVEKS 439
Query: 266 ASDSFSC 272
++ C
Sbjct: 440 LDETLVC 446
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 86/185 (46%), Gaps = 9/185 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ +K D+V+YN +I + VE ++ +MR+ P+V ++ +II L G+
Sbjct: 250 MKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGR 309
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDAS---GLMDEMVEKGLSPNATT 117
A +L EM + GC PD+ Y C+ RL S L M+ G+ P T
Sbjct: 310 MRDAYRMLDEMPKRGCQPDSITY------MCLFSRLEKPSEILSLFGRMIRSGVRPKMDT 363
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
Y + R F L+ ++ M +G P++ + ++ ++ +++A + +M+
Sbjct: 364 YVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMI 423
Query: 178 EKGFG 182
E+G
Sbjct: 424 ERGLS 428
Score = 41.2 bits (95), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 47/225 (20%), Positives = 87/225 (38%), Gaps = 20/225 (8%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVIS----------YTSIIGGLGLV 58
D S+ L+D C+ + V +A ++ +VI + I+ G +
Sbjct: 150 DETSFYNLVDALCEHKHVVEAEELC-------FGKNVIGNGFSVSNTKIHNLILRGWSKL 202
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
G K ++ K+M G D +Y+ + C + + A L EM + + + Y
Sbjct: 203 GWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAY 262
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
N R S + ++ M GC PN + ++KL ++ A ++ ++M +
Sbjct: 263 NTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPK 322
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+G + LF L K E F MI G +P ++
Sbjct: 323 RGCQPDSITYMCLFSRL---EKPSEILSLFGRMIRSGVRPKMDTY 364
>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
Length = 703
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 110/220 (50%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
+++ PD V++ LI C++ KA+ I E+ R DV SY+S+I GL VG+
Sbjct: 396 KDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRL 455
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
A V ++M + GC P++ YNA I +C R DA + +M + G SP TYN
Sbjct: 456 VDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTL 515
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
+ + + ++ M+ G P+ + L++ +K++ AL +W ++ KG
Sbjct: 516 IDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGL 575
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQV 221
+++ ++L LC GK+ EA F +M EK + P +
Sbjct: 576 KVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNL 615
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 131/260 (50%), Gaps = 10/260 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+++ G +P++ +YN ++D CK + ++ ++ E+M ++ PDVI+Y +I GL G
Sbjct: 255 VKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGD 314
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A V E+ + G DAA YN+ ++ +C A R+++A D GL N TYN+
Sbjct: 315 VDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTYNI 373
Query: 121 FFRVFYWSNDLRSS---WNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
+ + S + + W+L + C+P+T + L+ + A ++ +
Sbjct: 374 MIKGLFDSGMVDEAIELWDLLEK--DVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEAR 431
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP-SQVSFRRIKALMELANKQ 236
G + + + LC++G+LV+A K + +M + G KP S + I ++
Sbjct: 432 VSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTS 491
Query: 237 EALQNLSNKMALFG--PSMI 254
+A++ + +KMA G P++I
Sbjct: 492 DAVR-IYSKMADNGCSPTVI 510
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 102/224 (45%), Gaps = 1/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G KP+ YN LI +C+ + A +I KM D SP VI+Y ++I GL +
Sbjct: 465 MDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEK 524
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A V +EM E G PD Y + IR K++ DA + +++ KGL + +N+
Sbjct: 525 YQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNI 584
Query: 121 FFRVFYWSNDLRSSWNLYCRMM-GTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ + + +++ M C PN + L+ ++ A LW + E
Sbjct: 585 LIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITED 644
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G I+ + LC ++ E + E++ +G P+ +++
Sbjct: 645 GLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITW 688
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 94/202 (46%), Gaps = 1/202 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G P +++YN LID CK + ++A + +M + +PD+ +Y S+I GL +
Sbjct: 500 MADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKK 559
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEK-GLSPNATTYN 119
D A + K++ G D +N I C A ++ +A + +M EK PN TYN
Sbjct: 560 IDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYN 619
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
Y + + + L+ + G P+ S +K +++ +QL ++++ +
Sbjct: 620 TLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSR 679
Query: 180 GFGSYILVSDVLFDLLCDMGKL 201
G ++ ++L + G +
Sbjct: 680 GIIPTVITWNILVRAVIKYGPI 701
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 107/226 (47%), Gaps = 5/226 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+R V PD ++Y+ L+ K +++ A ++++M + PDV+ Y +++GG G+
Sbjct: 184 LRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCYNALLGGCFKAGE 243
Query: 61 PDKARDVL-KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+K V K +K+ G P+ A YN + C R ++ + + MV L P+ TY
Sbjct: 244 FEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYG 303
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ S D+ + +Y ++ TG + + LVK + +V+ A + W+
Sbjct: 304 ILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFA 363
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHK--PSQVSF 223
G + + +++ L D G + EA + +++EK P V+F
Sbjct: 364 GLRN-LRTYNIMIKGLFDSGMVDEAIE-LWDLLEKDVACIPDTVTF 407
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 105/236 (44%), Gaps = 1/236 (0%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ P++ +YN ++ C +++A + + +R ++PD I+Y++++ GL + D A
Sbjct: 154 IAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHAL 213
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMV-EKGLSPNATTYNLFFRV 124
D+L EM PD YNA + A + D++V + G PN TYN+
Sbjct: 214 DLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDG 273
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ ++ RM+ P+ + L+ R V+ A ++++++++ G
Sbjct: 274 LCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVID 333
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ + L C G++ EA K + G + + IK L + EA++
Sbjct: 334 AAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIE 389
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 76/169 (44%), Gaps = 1/169 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G PDI +Y LI D++++ A I +++ + + DV+ + +I GL G+
Sbjct: 535 MVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGK 594
Query: 61 PDKARDVLKEMKEY-GCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
D+A V +MKE C P+ YN + + A+ L + E GL P+ +YN
Sbjct: 595 VDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYN 654
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEI 168
+ + + L ++ G +P + LV+ + +++
Sbjct: 655 TRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYGPIQV 703
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 91/218 (41%), Gaps = 7/218 (3%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRD----EDISPDVISYTSIIGGLGLVG 59
+G P I S+N L+D + + R+ A + I+P++ +Y ++ L G
Sbjct: 113 LGCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARG 172
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
D+A + ++ PD Y+ + RL A L+DEM + P+ YN
Sbjct: 173 DLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCYN 232
Query: 120 LFFRVFYWSNDLRSSWNLYCRMM-GTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMV 177
+ + + ++ +++ G PN + + L LCK E+ ++W MV
Sbjct: 233 ALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVG-EVWERMV 291
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
++ +L LC G + A + + E+I+ G
Sbjct: 292 ANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTG 329
>gi|18491213|gb|AAL69509.1| unknown protein [Arabidopsis thaliana]
Length = 320
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 111/216 (51%), Gaps = 3/216 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV D+ SY+ +D+ CK + KA K+ ++M+ + DV++Y ++I +G +
Sbjct: 91 GVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFG 150
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
V +EM+E GC P+ A +N I+ C R+RDA ++DEM ++G P++ TY F
Sbjct: 151 IRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSR 210
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+++ S L+ RM+ +G P + + L++ +R ++ L +W M E G
Sbjct: 211 LEKPSEILS---LFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPD 267
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQ 220
+ + D L G L A + EMIE+G P +
Sbjct: 268 SAAYNAVIDALIQKGMLDMAREYEEEMIERGLSPRR 303
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 100/247 (40%), Gaps = 21/247 (8%)
Query: 34 EKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIA 93
+KM E ++ D+ SY+ + + G+P KA + KEMK D AYN IR +
Sbjct: 85 KKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGAS 144
Query: 94 KRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPN--TQ 151
+ + + EM E+G PN T+N ++ +R ++ + M GC P+ T
Sbjct: 145 QGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITY 204
Query: 152 SCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEM 211
C+F R EK L L+ M+ G + +L G L + M
Sbjct: 205 MCLF-----SRLEKPSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTM 259
Query: 212 IEKGHKPSQVSFRRI------KALMELANKQEALQNLSNKMALFGPSMIPKREEYLAEMS 265
E G P ++ + K ++++A + E + + P+R L E S
Sbjct: 260 KESGDTPDSAAYNAVIDALIQKGMLDMAREYEE--------EMIERGLSPRRRPELVEKS 311
Query: 266 ASDSFSC 272
++ C
Sbjct: 312 LDETLVC 318
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 86/184 (46%), Gaps = 9/184 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ +K D+V+YN +I + VE ++ +MR+ P+V ++ +II L G+
Sbjct: 122 MKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGR 181
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDAS---GLMDEMVEKGLSPNATT 117
A +L EM + GC PD+ Y C+ RL S L M+ G+ P T
Sbjct: 182 MRDAYRMLDEMPKRGCQPDSITY------MCLFSRLEKPSEILSLFGRMIRSGVRPKMDT 235
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
Y + R F L+ ++ M +G P++ + ++ ++ +++A + +M+
Sbjct: 236 YVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMI 295
Query: 178 EKGF 181
E+G
Sbjct: 296 ERGL 299
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 47/225 (20%), Positives = 87/225 (38%), Gaps = 20/225 (8%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVIS----------YTSIIGGLGLV 58
D S+ L+D C+ + V +A ++ +VI + I+ G +
Sbjct: 22 DETSFYNLVDALCEHKHVVEAEELC-------FGKNVIGNGFSVSNTKIHNLILRGWSKL 74
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
G K ++ K+M G D +Y+ + C + + A L EM + + + Y
Sbjct: 75 GWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAY 134
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
N R S + ++ M GC PN + ++KL ++ A ++ ++M +
Sbjct: 135 NTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPK 194
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+G + LF L K E F MI G +P ++
Sbjct: 195 RGCQPDSITYMCLFSRL---EKPSEILSLFGRMIRSGVRPKMDTY 236
>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 724
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 112/226 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G KP++ SY L+D +CK ++++AY ++ +M + + P+ + + +I +
Sbjct: 409 MRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHR 468
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++ +EM GC PD +N+ I C ++ A L+ +M+ +G+ N TYN
Sbjct: 469 IPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNT 528
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F +++ + L M+ G L + + L+K R +V+ A L+ M+ G
Sbjct: 529 LINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDG 588
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ ++L + LC G + EA + EM+ +G P V+F +
Sbjct: 589 LVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSL 634
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 116/222 (52%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+KP+ V +NCLI +CK+ ++ +A +I +M + PDV ++ S+I GL V + A
Sbjct: 448 GLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHA 507
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+L++M G + YN I + +++A L++EMV +G + TYN +
Sbjct: 508 LWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKG 567
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ ++ + +L+ +M+ G +P++ SC L+ R VE A++ +MV +G
Sbjct: 568 LCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPD 627
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
I+ + L + LC G++ + F ++ +G P V++ +
Sbjct: 628 IVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTL 669
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 111/218 (50%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ PD+ +YN LI Y K V A +++ MR++ P+V SYT ++ G +G+ D+A
Sbjct: 378 GIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEA 437
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++L EM G P+ +N I +C R+ +A + EM KG P+ T+N
Sbjct: 438 YNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISG 497
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
++++ + L M+ G + NT + L+ R+ +++ A +L N+MV +G
Sbjct: 498 LCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLD 557
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
+ + L LC G++ +A F +M+ G PS +S
Sbjct: 558 EITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSIS 595
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 110/239 (46%), Gaps = 8/239 (3%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
MG PD ++N +I CK ++ +A K+V +M +PD I+Y ++ GL +G+ D
Sbjct: 275 MGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDA 334
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEK-GLSPNATTYNLFF 122
A+D+ + + P + +N I + RL DA ++ +MV G+ P+ TYN
Sbjct: 335 AKDLFYRIPK----PTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLI 390
Query: 123 RVFYWSNDLRS-SWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
YW L + + M GC PN S LV + K++ A L N+M G
Sbjct: 391 -YGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGL 449
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
+ + L C ++ EA + F EM KG KP +F I L E+ + AL
Sbjct: 450 KPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHAL 508
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 119/245 (48%), Gaps = 9/245 (3%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDE-DISPDVISYTSIIGGL---GLVGQPD 62
KP V +N LI + +++ A ++ M I PDV +Y S+I G GLVG
Sbjct: 344 KPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGL-- 401
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
A +VL++M+ GC P+ +Y + +C ++ +A L++EM GL PN +N
Sbjct: 402 -ALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLI 460
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGF 181
F + + + ++ M GC P+ + L+ LC+ E ++ AL L DM+ +G
Sbjct: 461 SAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDE-IKHALWLLRDMISEGV 519
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQN 241
+ + + L + G++ EA K EM+ +G ++++ + + A + + ++
Sbjct: 520 VANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARS 579
Query: 242 LSNKM 246
L KM
Sbjct: 580 LFEKM 584
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 109/250 (43%), Gaps = 32/250 (12%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ P + ++ ++ C +V+ A ++ M P+ + Y ++I L + ++A
Sbjct: 207 IPPTLFTFGVVMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEAL 266
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY------- 118
+L+EM GC PDA +N I C R+ +A+ +++ M+ +G +P+ TY
Sbjct: 267 QLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGL 326
Query: 119 ----------NLFFRV--------------FYWSNDLRSSWNLYCRMMGT-GCLPNTQSC 153
+LF+R+ F L + + M+ + G +P+ +
Sbjct: 327 CKIGRVDAAKDLFYRIPKPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTY 386
Query: 154 MFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIE 213
L+ ++ V +AL++ DM KG + +L D C +GK+ EA EM
Sbjct: 387 NSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSA 446
Query: 214 KGHKPSQVSF 223
G KP+ V F
Sbjct: 447 DGLKPNTVGF 456
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 111/252 (44%), Gaps = 6/252 (2%)
Query: 1 MREM---GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGL 57
REM G KPD+ ++N LI C+ +++ A ++ M E + + ++Y ++I
Sbjct: 476 FREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLR 535
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
G+ +AR ++ EM G D YN+ I+ C A + A L ++M+ GL P++ +
Sbjct: 536 RGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSIS 595
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
N+ S + + M+ G P+ + L+ R ++E L ++ +
Sbjct: 596 CNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQ 655
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQE 237
+G + + L LC G + +A E IE G P+ R L++ QE
Sbjct: 656 AEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPND---RTWSILLQSLVPQE 712
Query: 238 ALQNLSNKMALF 249
L + A+F
Sbjct: 713 TLDRRTFYNAVF 724
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 103/245 (42%), Gaps = 40/245 (16%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
+P SYN ++++ + A + M I P + ++ ++ L V + D A
Sbjct: 173 EPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCAVNEVDSALS 232
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
VL++M ++GC P++ Y I + R+ +A L++EM G P+A T+
Sbjct: 233 VLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETF-------- 284
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
ND+ ++ LCK +++ A ++ N M+ +GF +
Sbjct: 285 --NDV------------------------ILGLCKF-DRINEAAKMVNRMLIRGFTPDDI 317
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLSNK 245
L + LC +G+ V+A K I KP+ V F I + +A LS+
Sbjct: 318 TYGYLMNGLCKIGR-VDAAKDLFYRIP---KPTSVIFNTLIHGFVTHGRLDDAKAVLSDM 373
Query: 246 MALFG 250
+ +G
Sbjct: 374 VTSYG 378
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 95/221 (42%), Gaps = 3/221 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G + Y LI + + + +++ +M+DE I + SI+ G P +
Sbjct: 100 GYRHSFDVYQVLIGKLGSNGEFKTIDRLLMQMKDEGIVFKESLFISIMRDYDKAGFPGQT 159
Query: 65 RDVLKEMKE-YGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
++ EM+ Y C P +YN + + A+ + +M+ + + P T+ + +
Sbjct: 160 TRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMK 219
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG-FG 182
N++ S+ ++ M GC+PN+ L+ + +V ALQL +M G
Sbjct: 220 ALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVP 279
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+DV+ LC ++ EA K M+ +G P +++
Sbjct: 280 DAETFNDVILG-LCKFDRINEAAKMVNRMLIRGFTPDDITY 319
>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 527
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 121/223 (54%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ P++++Y+ LI +C Q+ +A+ ++ +M ++I+P+V +YT ++ L G+
Sbjct: 176 MDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGK 235
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A+++L M + G P+ +YN + YC+ +++A + MV+KG++PN +YN+
Sbjct: 236 VKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNI 295
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
S + + NL ++ +PNT + L+ + ++ AL L +M +G
Sbjct: 296 MIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRG 355
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ ++ L D LC L +A F++M E+G +P++ ++
Sbjct: 356 QPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTY 398
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 122/245 (49%), Gaps = 8/245 (3%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+P++V YN +ID CKD+ V +AY + +M I P+VI+Y+++I G L GQ +A
Sbjct: 146 TRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAF 205
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+L EM P+ Y + C ++++A L+ M ++G+ PN +YN +
Sbjct: 206 GLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGY 265
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEKGFGSY 184
+++++ ++ M+ G PN S ++ +LCK ++V+ A+ L +++ K
Sbjct: 266 CLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCK-SKRVDEAMNLLREVLHKNMVPN 324
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSN 244
+ L D C +G++ A EM +G V++ +L++ K QNL
Sbjct: 325 TVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTY---TSLLDALCKN---QNLDK 378
Query: 245 KMALF 249
ALF
Sbjct: 379 ATALF 383
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 106/211 (50%), Gaps = 2/211 (0%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ P++ +Y L+D CK+ +V++A ++ M E + P+V+SY +++ G L+G+ A+
Sbjct: 216 INPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAK 275
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+ M + G P+ +YN I C +KR+ +A L+ E++ K + PN TY+ F
Sbjct: 276 QMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGF 335
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ S+ +L M G + + L+ LCK Q ++ A L+ M E+G
Sbjct: 336 CKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQN-LDKATALFMKMKERGIQPN 394
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
L D LC G+ A+K F ++ KG
Sbjct: 395 KYTYTALIDGLCKGGRHKNAQKLFQHLLVKG 425
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 110/227 (48%), Gaps = 2/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GVKP++VSYN L+D YC +V+ A ++ M + ++P+V SY +I L +
Sbjct: 246 MTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKR 305
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A ++L+E+ P+ Y++ I +C R+ A L+ EM +G + TY
Sbjct: 306 VDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTS 365
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+ +L + L+ +M G PN + L+ LCK + A +L+ ++ K
Sbjct: 366 LLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRH-KNAQKLFQHLLVK 424
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G + +V+ LC G L EA +M E G P V+F I
Sbjct: 425 GCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEII 471
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 108/221 (48%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
++G +P+ ++ N L+ C +V+K+ +K+ + D +SY +++ GL +G+
Sbjct: 73 KLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETR 132
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
A +L+ +++ P+ YN I C K + +A L EM +G+ PN TY+
Sbjct: 133 SALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLI 192
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
F + L ++ L M+ PN + L+ ++ KV+ A L M ++G
Sbjct: 193 YGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVK 252
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + L D C +G++ A++ F M++KG P+ S+
Sbjct: 253 PNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSY 293
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 103/227 (45%), Gaps = 2/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G++PD+ + N LI+ +C Q+ ++ ++ K+ P+ I+ +++ GL L G+
Sbjct: 36 MQVKGIEPDLFTLNILINCFCHLGQMTFSFTVLGKILKLGYQPNTITLNTLMKGLCLKGE 95
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
K+ ++ G D +Y + C R A L+ + ++ PN YN
Sbjct: 96 VKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNT 155
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEK 179
+ +++LY M G PN + L+ C + +E A L N+M+ K
Sbjct: 156 IIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLME-AFGLLNEMILK 214
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ +L D LC GK+ EA+ M ++G KP+ VS+ +
Sbjct: 215 NINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTL 261
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 71/150 (47%), Gaps = 11/150 (7%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E G++P+ +Y LID CK + + A K+ + + + +V +Y +I GL G
Sbjct: 386 MKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGM 445
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + +M+E GC PDA + IR+ + A L+ EM+ K L L
Sbjct: 446 LDEALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEMIAKDL--------L 497
Query: 121 FFRVFYWS---NDLRSSWNLYCRMMGTGCL 147
FR F+ N+ + L M+ G L
Sbjct: 498 RFRDFHGERSPNENDKAEKLLHEMIAKGLL 527
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 91/208 (43%), Gaps = 2/208 (0%)
Query: 42 SPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASG 101
+P ++ + I+G L + A + K+M+ G PD N I +C ++ +
Sbjct: 7 TPPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFT 66
Query: 102 LMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGC-LPNTQSCMFLVKLC 160
++ ++++ G PN T N + +++ S + + +++ G + L LC
Sbjct: 67 VLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLC 126
Query: 161 KRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQ 220
K E AL+L + ++ +++ + + D LC + EA + EM +G P+
Sbjct: 127 KIGE-TRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNV 185
Query: 221 VSFRRIKALMELANKQEALQNLSNKMAL 248
+++ + LA + L N+M L
Sbjct: 186 ITYSTLIYGFCLAGQLMEAFGLLNEMIL 213
>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 719
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 120/249 (48%), Gaps = 6/249 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
++E GV PDIV+YN LI Y +E+A++++ M + SP V +Y ++I GL G+
Sbjct: 251 VQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGK 310
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A++V EM G PD+ Y + + C + + +M + + P+ ++
Sbjct: 311 YERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSS 370
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+F S +L + + + G +P+ L++ R+ + A+ L N+M+++G
Sbjct: 371 MMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQG 430
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
++ + + LC L EA+K F EM E+G P + L L + L
Sbjct: 431 CAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYT------LTILIDGHCKLG 484
Query: 241 NLSNKMALF 249
NL N M LF
Sbjct: 485 NLQNAMELF 493
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 110/230 (47%), Gaps = 8/230 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGL---GL 57
++E G+ PD V Y LI YC+ + +A + +M + + DV++Y +I+ GL +
Sbjct: 391 VKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKM 450
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
+G+ DK + EM E G +PD+ I +C L++A L +M EK + + T
Sbjct: 451 LGEADK---LFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVT 507
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDM 176
YN F D+ ++ ++ M+ LP S LV LC + E A ++W++M
Sbjct: 508 YNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSE-AFRVWDEM 566
Query: 177 VEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ K +++ + + C G + E +MI +G P +S+ +
Sbjct: 567 ISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTL 616
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 113/246 (45%), Gaps = 9/246 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+ PD + LID +CK ++ A ++ +KM+++ I DV++Y +++ G G VG
Sbjct: 461 MTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGD 520
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A+++ +M P +++ + C L +A + DEM+ K + P N
Sbjct: 521 IDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNS 580
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + S + +M+ G +P+ S L+ ++E + A L M EK
Sbjct: 581 MIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQ 640
Query: 181 FGSYILVSDV-----LFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELAN 234
G LV DV + C ++ EAE +MIE+G P + ++ I + N
Sbjct: 641 GG---LVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDN 697
Query: 235 KQEALQ 240
EA +
Sbjct: 698 LTEAFR 703
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 108/241 (44%), Gaps = 1/241 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ PD +Y L+ CK + I MR D+ PD++ ++S++ G
Sbjct: 321 MLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGN 380
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA +KE G PD Y I+ YC + +A L +EM+++G + + TYN
Sbjct: 381 LDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNT 440
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
L + L+ M G P++ + L+ + ++ A++L+ M EK
Sbjct: 441 ILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKR 500
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEAL 239
++ + L D +G + A++ + +M+ K P+ +SF + AL + EA
Sbjct: 501 IKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAF 560
Query: 240 Q 240
+
Sbjct: 561 R 561
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 75/146 (51%), Gaps = 2/146 (1%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+KP ++ N +I YC+ +EKM E PD ISY ++I G KA
Sbjct: 571 IKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAF 630
Query: 66 DVLKEM--KEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
++K+M K+ G PD YN+ + +C ++++A ++ +M+E+G++P+ +TY
Sbjct: 631 GLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLIN 690
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPN 149
F ++L ++ + M+ G P+
Sbjct: 691 GFVSQDNLTEAFRFHDEMLQRGFSPD 716
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 63/112 (56%), Gaps = 2/112 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDED--ISPDVISYTSIIGGLGLVGQPD 62
G PD +SYN LI + K+ + KA+ +V+KM ++ + PDV +Y SI+ G Q
Sbjct: 605 GFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMK 664
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPN 114
+A VL++M E G PD + Y + I + L +A DEM+++G SP+
Sbjct: 665 EAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSPD 716
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 109/255 (42%), Gaps = 4/255 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+R G I + N LI + VE A++I +++ + +V + ++ L G+
Sbjct: 181 LRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEISRSGVGVNVYTLNIMVNALCKDGK 240
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+K L E++E G YPD YN I Y + +A LM M KG SP TYN
Sbjct: 241 MEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNT 300
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCM-FLVKLCKRQEKVEIALQLWNDMVEK 179
+ ++ M+ +G P++ + L++ CK+ + VE +++DM +
Sbjct: 301 VINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETE-NIFSDMRSR 359
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEA 238
++ + L G L +A F + E G P V + I+ EA
Sbjct: 360 DVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEA 419
Query: 239 LQNLSNKMALFGPSM 253
+ NL N+M G +M
Sbjct: 420 M-NLRNEMLQQGCAM 433
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 93/229 (40%), Gaps = 37/229 (16%)
Query: 13 YNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMK 72
++ LI + + R++ +AY+ +R + + + + ++IG L +G + A + +E+
Sbjct: 158 FDLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEIS 217
Query: 73 EYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLR 132
G + N + C ++ + E+ EKG+ P+ TYN
Sbjct: 218 RSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNT------------ 265
Query: 133 SSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLF 192
L+ Q +E A +L + M KGF + + +
Sbjct: 266 -----------------------LISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVI 302
Query: 193 DLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQN 241
+ LC GK A++ F EM+ G P ++R + LME K +A++
Sbjct: 303 NGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSL--LMEACKKGDAVET 349
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 69/155 (44%), Gaps = 12/155 (7%)
Query: 91 CIAKRLRDASGLMDEMVEKGLSP------NATTYNLFFRVFYWSNDLRSSWNLYCRMMGT 144
C+ + +R + E+V +S N + ++L R F + LR ++ + +
Sbjct: 125 CVLRMIRRSGVSRVEIVNSLVSTYSNCGSNDSVFDLLIRTFVQARKLREAYEAFTLLRSK 184
Query: 145 GCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEA 204
G + +C L+ R VE+A +++ ++ G G + +++ + LC GK+ +
Sbjct: 185 GYTVSIDACNALIGSLVRIGWVELAWRIYQEISRSGVGVNVYTLNIMVNALCKDGKMEKV 244
Query: 205 EKSFLEMIEKGHKPSQVSFRRI------KALMELA 233
E+ EKG P V++ + + LME A
Sbjct: 245 GTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEA 279
>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
Length = 694
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 117/237 (49%), Gaps = 3/237 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MRE G++ + V++ LID +CK ++ A VE+MR I P V+ Y ++I G +G+
Sbjct: 319 MRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGR 378
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D AR++++EM+ PD Y+ I YC L A L +M++KG+ P+A TY+
Sbjct: 379 MDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSS 438
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
R L + L+ M+ G P+ + L+ ++ VE AL L ++M+ KG
Sbjct: 439 LIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKG 498
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQE 237
++ VL + L + EA + ++ + P + + ALM +K E
Sbjct: 499 VLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKY---DALMLCCSKAE 552
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 129/265 (48%), Gaps = 4/265 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ PD+V++ LI CK +E+A +V +MR+ + + +++T++I G G
Sbjct: 284 MTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGF 343
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A ++EM++ G P YNA I YC R+ A L+ EM K + P+ TY+
Sbjct: 344 LDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYST 403
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ +L S++ L +M+ G LP+ + L++ ++++ A +L+ +M++ G
Sbjct: 404 IISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLG 463
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEAL 239
L D C G + +A EMI KG P V++ I L + A +EA
Sbjct: 464 VQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAH 523
Query: 240 QNLSNKMALFGPSMIPKREEYLAEM 264
+ L L+ +P +Y A M
Sbjct: 524 RLL---FKLYHEDPVPDNIKYDALM 545
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 106/224 (47%), Gaps = 1/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV P++ +YN L+ C ++E+A +V MR +P+ ++Y +++ G+
Sbjct: 143 MLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 202
Query: 61 PDKARDVLKEMKEYG-CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
D A V+ M+E G P+ +N+ + C A R+ A + DEMV +GL+P+ +YN
Sbjct: 203 LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 262
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ L S ++ M G +P+ + L+ + +E A+ L M E+
Sbjct: 263 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 322
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G + L D C G L +A + EM + G +PS V +
Sbjct: 323 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCY 366
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 117/250 (46%), Gaps = 2/250 (0%)
Query: 1 MREMG-VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVG 59
MRE G KP++V++N +++ CK ++E A K+ ++M E ++PDV+SY +++ G VG
Sbjct: 213 MREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVG 272
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
++ V EM + G PD + + I C A L A L+ +M E+GL N T+
Sbjct: 273 CLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFT 332
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
F L + M G P+ L+ + ++++A +L +M K
Sbjct: 333 ALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAK 392
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEA 238
++ + C +G L A + +M++KG P +++ I+ L E +A
Sbjct: 393 RVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDA 452
Query: 239 LQNLSNKMAL 248
+ N + L
Sbjct: 453 CELFENMLQL 462
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 97/201 (48%), Gaps = 5/201 (2%)
Query: 42 SPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASG 101
+P V +Y +++ L P AR L M +G P+ YN +R C RL +A G
Sbjct: 115 APSVPAYNAVLLALSDASLPS-ARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVG 173
Query: 102 LMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG-CLPNTQSCMFLVK-L 159
++ +M G +PNA TYN F + +L + + M G PN + +V L
Sbjct: 174 VVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGL 233
Query: 160 CKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
CK ++E A +++++MV +G ++ + L C +G L E+ F EM ++G P
Sbjct: 234 CK-AGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPD 292
Query: 220 QVSFRR-IKALMELANKQEAL 239
V+F I A + N ++A+
Sbjct: 293 VVTFTSLIHATCKAGNLEQAV 313
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 89/231 (38%), Gaps = 50/231 (21%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++GV+PD +Y LID +CK+ VEKA + ++M + + PDV++Y+ +I GL +
Sbjct: 459 MLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSAR 518
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAA---------------------------------- 86
+A +L ++ PD Y+A
Sbjct: 519 TKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQS 578
Query: 87 ----------------IRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSND 130
I +C +R A +M+ G SPN+T+ R +
Sbjct: 579 MLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGM 638
Query: 131 LRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
+ + N ++ L + ++ L+ L +++ V+ + + M G
Sbjct: 639 VVEADNAIQDLLTCCPLADAEASKALIDLNRKEGNVDALIDVLCGMARDGL 689
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 74/166 (44%), Gaps = 4/166 (2%)
Query: 83 YNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMM 142
++A IR+Y R A+ + G +P+ YN ++ L S+ M+
Sbjct: 86 FDALIRSYASLPRPSLAAAALAFAASAGYAPSVPAYNAVLLALSDAS-LPSARRFLSSML 144
Query: 143 GTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKL 201
G PN + LV+ LC R ++E A+ + DM G + + L C G+L
Sbjct: 145 RHGVAPNVYTYNILVRALCARG-RLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGEL 203
Query: 202 VEAEKSFLEMIEKGH-KPSQVSFRRIKALMELANKQEALQNLSNKM 246
AE+ M E+G+ KP+ V+F + + A + E + + ++M
Sbjct: 204 DGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEM 249
>gi|356516744|ref|XP_003527053.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18900-like [Glycine max]
Length = 882
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 106/219 (48%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
R+ G D +Y ++ + + R+ K++E+M + P+V++Y +I G
Sbjct: 378 RQPGFWHDGHTYTTMVGILGRAREFGAINKLLEQMVKDGCQPNVVTYNRLIHSYGRANYL 437
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
+A +V +M+E GC PD Y I + A L A + + M E GLSP+ TY++
Sbjct: 438 GEALNVFNQMQEMGCEPDRVTYCTLIDIHAKAGFLDVAMSMYERMQEVGLSPDTFTYSVM 497
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
S +L ++ L+C M+ GC+PN + L+ L + + AL+L+ DM GF
Sbjct: 498 INCLGKSGNLSAAHRLFCEMVDQGCVPNIVTYNILIALQAKARNYQTALKLYRDMQNAGF 557
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQ 220
+ ++ ++L G L EAE F EM + P +
Sbjct: 558 KPDKVTYSIVMEVLGYCGYLEEAEAVFFEMKQNNWVPDE 596
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 100/219 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+EMG +PD V+Y LID++ K ++ A + E+M++ +SPD +Y+ +I LG G
Sbjct: 447 MQEMGCEPDRVTYCTLIDIHAKAGFLDVAMSMYERMQEVGLSPDTFTYSVMINCLGKSGN 506
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A + EM + GC P+ YN I A+ + A L +M G P+ TY++
Sbjct: 507 LSAAHRLFCEMVDQGCVPNIVTYNILIALQAKARNYQTALKLYRDMQNAGFKPDKVTYSI 566
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
V + L + ++ M +P+ L+ L + VE A + ++ M+ G
Sbjct: 567 VMEVLGYCGYLEEAEAVFFEMKQNNWVPDEPVYGLLIDLWGKAGNVEKAWEWYHAMLRAG 626
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
+ + L + +L +A M+ G PS
Sbjct: 627 LLPNVPTCNSLLSAFLRVHRLPDAYNLLQNMVTLGLNPS 665
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 75/164 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G P+IV+YN LI + K R + A K+ M++ PD ++Y+ ++ LG G
Sbjct: 517 MVDQGCVPNIVTYNILIALQAKARNYQTALKLYRDMQNAGFKPDKVTYSIVMEVLGYCGY 576
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A V EMK+ PD Y I + A + A M+ GL PN T N
Sbjct: 577 LEEAEAVFFEMKQNNWVPDEPVYGLLIDLWGKAGNVEKAWEWYHAMLRAGLLPNVPTCNS 636
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQE 164
F + L ++NL M+ G P+ Q+ L+ C +
Sbjct: 637 LLSAFLRVHRLPDAYNLLQNMVTLGLNPSLQTYTLLLSCCTEAQ 680
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 89/193 (46%), Gaps = 15/193 (7%)
Query: 63 KARDVLKEMKEY--------------GCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVE 108
+A +LK+++++ G + D Y + A+ + L+++MV+
Sbjct: 355 QANQILKQLQDHSVALSFFYWLKRQPGFWHDGHTYTTMVGILGRAREFGAINKLLEQMVK 414
Query: 109 KGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEI 168
G PN TYN + +N L + N++ +M GC P+ + L+ + + +++
Sbjct: 415 DGCQPNVVTYNRLIHSYGRANYLGEALNVFNQMQEMGCEPDRVTYCTLIDIHAKAGFLDV 474
Query: 169 ALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKA 228
A+ ++ M E G V+ + L G L A + F EM+++G P+ V++ + A
Sbjct: 475 AMSMYERMQEVGLSPDTFTYSVMINCLGKSGNLSAAHRLFCEMVDQGCVPNIVTYNILIA 534
Query: 229 LMELA-NKQEALQ 240
L A N Q AL+
Sbjct: 535 LQAKARNYQTALK 547
>gi|224139118|ref|XP_002326772.1| predicted protein [Populus trichocarpa]
gi|222834094|gb|EEE72571.1| predicted protein [Populus trichocarpa]
Length = 512
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 122/265 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G KP SY ID YCK A +I E+M + P + + T++I G G+
Sbjct: 244 MVKRGFKPSSSSYGIRIDAYCKKGYFADALRIFEEMERANCLPTLETVTTLIHGAGVARN 303
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KAR++ E+ + D AYNA I + + ++ A LMDEM + + + TY+
Sbjct: 304 AMKARELFDEIPKRNLQADTGAYNALISSLVKCREVKSAIQLMDEMEKNNIHYDDMTYHT 363
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F S + LY +M+ +P T++ + L+K ++++ L LW +V KG
Sbjct: 364 MFLGLMKSGSIEGVCELYHKMIDRNFVPKTRTVVMLMKFFCVNSQIDLGLNLWGYLVGKG 423
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ + D+L LC G+ EA K + +E+G S+ + ++ + +N + L
Sbjct: 424 YCPHHHALDLLVTGLCSRGRSHEAFKCSKQSLERGIHVSEAVYGMLERFLLQSNMTDKLG 483
Query: 241 NLSNKMALFGPSMIPKREEYLAEMS 265
L+ + + P Y+ S
Sbjct: 484 ELNQMIEKLQSVLPPSSGNYIHSPS 508
>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
Length = 735
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 121/218 (55%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ P+++++N L+DV+ K+ ++++A ++ ++M ISP++I+Y +++ G + + +A
Sbjct: 294 IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEAN 353
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
++L M C PD + + I+ YC+ KR+ D + + ++GL NA TY++ + F
Sbjct: 354 NMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGF 413
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
S ++ + L+ M+ G LP+ + L+ K+E AL+++ D+ + I
Sbjct: 414 CQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGI 473
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + + +C GK+ +A F + KG KP+ +++
Sbjct: 474 VMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTY 511
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 114/223 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E VK D+ +Y+ +ID C+D ++ A + ++M + I V++Y S++ GL G+
Sbjct: 219 MEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGK 278
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ +LK+M P+ +N + + +L++A+ L EM+ +G+SPN TYN
Sbjct: 279 WNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNT 338
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ N L + N+ M+ C P+ + L+K ++V+ ++++ ++ ++G
Sbjct: 339 LMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRG 398
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + +L C GK+ AE+ F EM+ G P +++
Sbjct: 399 LVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTY 441
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 103/221 (46%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
++G +PD ++N LI + +V +A +V++M + PDV++Y SI+ G+ G
Sbjct: 151 KLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTS 210
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
A D+L++M+E D Y+ I + C + A L EM KG+ + TYN
Sbjct: 211 LALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLV 270
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
R + L M+ +PN + L+ + ++ K++ A +L+ +M+ +G
Sbjct: 271 RGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGIS 330
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I+ + L D C +L EA M+ P V+F
Sbjct: 331 PNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTF 371
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 109/223 (48%), Gaps = 2/223 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ +I + N +I+ +C+ + AY ++ K+ PD ++ ++I GL L G+ +A
Sbjct: 118 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEA 177
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++ M E GC PD YN+ + C + A L+ +M E+ + + TY+
Sbjct: 178 VVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDS 237
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGS 183
+ ++ +L+ M G + + LV+ LCK + + AL L DMV +
Sbjct: 238 LCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGAL-LLKDMVSREIVP 296
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ +VL D+ GKL EA + + EMI +G P+ +++ +
Sbjct: 297 NVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTL 339
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 113/272 (41%), Gaps = 37/272 (13%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ P+I++YN L+D YC ++ +A +++ M SPD++++TS+I G +V + D
Sbjct: 328 GISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDG 387
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF-- 122
V + + + G +A Y+ ++ +C + +++ A L EMV G+ P+ TY +
Sbjct: 388 MKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDG 447
Query: 123 --------RVFYWSNDLRSS-------------------------WNLYCRMMGTGCLPN 149
+ DL+ S WNL+C + G PN
Sbjct: 448 LCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPN 507
Query: 150 TQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSF 208
+ ++ LCK+ E + L M E G + L G L + K
Sbjct: 508 VMTYTVMISGLCKKGSLSEANI-LLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLI 566
Query: 209 LEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
EM G S + + ++ A K+ L+
Sbjct: 567 EEMKSCGFSADASSIKMVIDMLLSAMKRLTLR 598
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 71/145 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV PD+++Y L+D C + ++EKA +I E ++ + ++ YT+II G+ G+
Sbjct: 429 MVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGK 488
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A ++ + G P+ Y I C L +A+ L+ +M E G +PN TYN
Sbjct: 489 VEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNT 548
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTG 145
R DL +S L M G
Sbjct: 549 LIRAHLRDGDLTASAKLIEEMKSCG 573
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/233 (20%), Positives = 98/233 (42%), Gaps = 3/233 (1%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P +V ++ + +Q +++ I+ ++ + +I + A V
Sbjct: 86 PSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSV 145
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L ++ + G PD +N I+ + ++ +A L+D MVE G P+ TYN
Sbjct: 146 LGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICR 205
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
S D + +L +M + + ++ R ++ A+ L+ +M KG S ++
Sbjct: 206 SGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVT 265
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ L LC GK + +M+ + P+ ++F L+++ K+ LQ
Sbjct: 266 YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITF---NVLLDVFVKEGKLQ 315
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 85/204 (41%)
Query: 23 DRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAA 82
D + + A + ++M P ++ ++ + Q + D K+++ G +
Sbjct: 66 DIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYT 125
Query: 83 YNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMM 142
N I +C + A ++ ++++ G P+ TT+N + + + + L RM+
Sbjct: 126 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMV 185
Query: 143 GTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLV 202
GC P+ + +V R +AL L M E+ + + + D LC G +
Sbjct: 186 ENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCID 245
Query: 203 EAEKSFLEMIEKGHKPSQVSFRRI 226
A F EM KG K S V++ +
Sbjct: 246 AAISLFKEMETKGIKSSVVTYNSL 269
>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
Length = 716
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 120/245 (48%), Gaps = 5/245 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
++ G+ P +++YN L+D YC+ +E+A + ++M ++ PDV +YT ++ G V
Sbjct: 398 LKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRN 457
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
R+ EM G PD AYN I I +A L + M+ +G+S + TYN+
Sbjct: 458 LAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNI 517
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPN--TQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
F S +L+ ++ L+ +M+ G P+ T +C+ C+R E A +++ M+
Sbjct: 518 FLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAH-CERGRLRE-ARDIFDGMLV 575
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQE 237
G + V C G L A F +M+E+G +P++V++ I AL +
Sbjct: 576 SGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNL 635
Query: 238 ALQNL 242
A Q+
Sbjct: 636 AYQHF 640
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 108/244 (44%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G++PD +YN I +A+++ E M IS D ++Y + GL G
Sbjct: 468 MLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGN 527
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A + +M G PD Y I +C RLR+A + D M+ GL P+A TY +
Sbjct: 528 LKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTV 587
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + +L S++ + +M+ G PN + L+ R + +A Q +++M+E+G
Sbjct: 588 FIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERG 647
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+L D C G EA + + EM + G P + + + + A+Q
Sbjct: 648 LSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPDHCTHNALFKGFDEGQSKHAIQ 707
Query: 241 NLSN 244
+ N
Sbjct: 708 YMEN 711
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 111/225 (49%), Gaps = 3/225 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKM--RDEDISPDVISYTSIIGGLGLV 58
M ++G++P IV+YN L+D + ++ +V++A K++ +M R P ++Y +I GL
Sbjct: 222 MLQLGIEPSIVTYNTLLDSFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARK 281
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
G+ +KA ++ M+ A +N I Y + A L EM +G+ P TY
Sbjct: 282 GELEKAAQLVDRMR-MSKKASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTY 340
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
N + S ++ ++ + M G LP+ + L+ + ++ AL L+ D+
Sbjct: 341 NTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKR 400
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G +L ++L D C +G L EA + EM+E+G +P ++
Sbjct: 401 AGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTY 445
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 107/255 (41%), Gaps = 35/255 (13%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
M K ++N LI Y VEKA + +M +E I P V++Y +II G+ G +
Sbjct: 296 MSKKASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEA 355
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
AR EM+ G PD YN+ I YC A L++A L ++ GL+P+ TYN+
Sbjct: 356 ARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLD 415
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEI--------------- 168
+ DL + M+ GC P+ + L+ ++ + +
Sbjct: 416 GYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQP 475
Query: 169 --------------------ALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSF 208
A QL M+ +G S + ++ D LC G L +A +
Sbjct: 476 DCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLW 535
Query: 209 LEMIEKGHKPSQVSF 223
++M+ G +P +++
Sbjct: 536 MKMVSDGLQPDCITY 550
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 70/174 (40%), Gaps = 3/174 (1%)
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
+EM +G P N +R R D + EM++ G+ P+ TYN F+
Sbjct: 183 AFREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFF 242
Query: 127 WSNDLRSSWNLYCRMMG--TGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + L M GCLP+ + ++ R+ ++E A QL + M S
Sbjct: 243 REGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSKKASA 302
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEA 238
+ ++ G + +A LEM +G P+ V++ I M + EA
Sbjct: 303 FTFNPLITGYFAR-GSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEA 355
>gi|125590524|gb|EAZ30874.1| hypothetical protein OsJ_14948 [Oryza sativa Japonica Group]
Length = 414
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 103/199 (51%), Gaps = 1/199 (0%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
PD+ S+N +I C+ QV+KA ++VE+M + SPD +++ ++ GL + + +
Sbjct: 79 SPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHE 138
Query: 67 VLKEMKEYG-CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
VL+ ++ G C P+ + + I YC A +L DA + ++MV G+ PN TYN+ +
Sbjct: 139 VLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGY 198
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
DL S+ +Y +M C P+ + L+ R +++ AL++W+DM + +
Sbjct: 199 GKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNV 258
Query: 186 LVSDVLFDLLCDMGKLVEA 204
++ LC + EA
Sbjct: 259 YTFSIIIHSLCKQNRSDEA 277
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 103/225 (45%), Gaps = 2/225 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKM-RDEDISPDVISYTSIIGGLGLVG 59
M E G PD V++N L+D C+ +V + ++++ ++ RD P+V+++TS+I G G
Sbjct: 108 MNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAG 167
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ + A V +M G P+ YN I Y L A + +M P+ T++
Sbjct: 168 KLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFS 227
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDM-VE 178
+ L + ++ M PN + ++ +Q + + A+ L N++ +
Sbjct: 228 SLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIGLLNELNLR 287
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + + D+LC GK+ EA M EKG +P + ++
Sbjct: 288 PDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTY 332
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 65/123 (52%), Gaps = 1/123 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMR-DEDISPDVISYTSIIGGLGLVG 59
M + ++P++ +++ +I CK + ++A ++ ++ DI+P Y +I L G
Sbjct: 249 MAQHRIQPNVYTFSIIIHSLCKQNRSDEAIGLLNELNLRPDIAPQAFIYNPVIDVLCKCG 308
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ D+A + K M+E GC PD Y I YC+ R+ +A EMVE G SP++ T N
Sbjct: 309 KVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVN 368
Query: 120 LFF 122
F
Sbjct: 369 CFI 371
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 88/181 (48%), Gaps = 1/181 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ P+ V+YN LI+ Y K + A ++ ++M PDV++++S+I G GQ
Sbjct: 179 MVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQ 238
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEM-VEKGLSPNATTYN 119
D A + +M ++ P+ ++ I + C R +A GL++E+ + ++P A YN
Sbjct: 239 LDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIGLLNELNLRPDIAPQAFIYN 298
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
V + + + M GC P+ + L+ + ++ A+ +++MVE
Sbjct: 299 PVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEA 358
Query: 180 G 180
G
Sbjct: 359 G 359
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 85/219 (38%), Gaps = 37/219 (16%)
Query: 42 SPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAY------------------ 83
SPD + ++ D + +L + E+GC +A AY
Sbjct: 8 SPDARFLSFLVSSCTCANLLDASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVA 67
Query: 84 ------------------NAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
N I+ C +++ A L++ M E G SP+ T+N+
Sbjct: 68 LFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNILVDGL 127
Query: 126 YWSNDLRSSWNLYCRMMGTG-CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+N++ + R+ G C+PN + ++ + K+E A+ ++NDMV G
Sbjct: 128 CRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPN 187
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ +VL + +G L A + + +M P V+F
Sbjct: 188 TVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTF 226
Score = 40.0 bits (92), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 33/69 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G +PD +Y LI YC ++ +A +M + SPD I+ I L G
Sbjct: 320 MEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAGM 379
Query: 61 PDKARDVLK 69
P++ V++
Sbjct: 380 PNEVDHVMR 388
>gi|297807255|ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
gi|297317348|gb|EFH47770.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
Length = 1202
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 108/226 (47%), Gaps = 35/226 (15%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+KPD ++YNCLI +C+ +E A + V KM+ + +SP V +Y +IGG G +
Sbjct: 788 MEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYE 847
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DK D+LKEM++ G P+ +Y I C +L +A + +M ++G+SPN YN+
Sbjct: 848 FDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNM 907
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
L+ C + K+E A + +M +KG
Sbjct: 908 -----------------------------------LIDGCCSKGKIEDAFRFSEEMFKKG 932
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ + L D L GKL EAE LE+ KG KP ++ +
Sbjct: 933 IELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSL 978
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 127/261 (48%), Gaps = 4/261 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ + P + YN LID CK RQ++ A ++ ++M + P +I+Y ++I G G
Sbjct: 578 MKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLIDGYCKDGN 637
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
P+K+ V + MK P +N ++ A + DA ++ EM ++G P+A T+++
Sbjct: 638 PEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSI 697
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + ++ ++ +Y + +G N +C L+ ++ ++E A ++ + KG
Sbjct: 698 LFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGREMAKG 757
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEAL 239
++ + + D G LV A M ++G KP +++ I+ EL + + A
Sbjct: 758 LVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAE 817
Query: 240 QNLSNKMALFGPSMIPKREEY 260
Q + NKM L G S P E Y
Sbjct: 818 QEV-NKMKLKGVS--PSVETY 835
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 115/223 (51%), Gaps = 2/223 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+K + + + L++ CK+ Q+EKA +I+ + + + P+ + Y ++I G G A
Sbjct: 722 GLKMNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGA 781
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
R + M++ G PD AYN IR +C + +A +++M KG+SP+ TYN+
Sbjct: 782 RMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGG 841
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGS 183
+ + ++L M G +PN S L+ LCK + +E + + DM ++G
Sbjct: 842 YGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQI-VKRDMEDRGVSP 900
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + ++L D C GK+ +A + EM +KG + + V++ +
Sbjct: 901 NVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTL 943
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 107/254 (42%), Gaps = 41/254 (16%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P +++YN LID YCKD EK++K+ E+M+ ++I P +I++ +++ GL G + A +V
Sbjct: 620 PSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAENV 679
Query: 68 LKEMKEYGCYPDAAAYNAAIRNY-----------------------------------CI 92
L EMK+ G PDA ++ Y C
Sbjct: 680 LTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALCK 739
Query: 93 AKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS 152
++ A ++ + KGL PN YN + DL + M G P+ +
Sbjct: 740 EGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLA 799
Query: 153 CMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSF---L 209
L++ +E A Q N M KG + ++ L+ G+ E +K F
Sbjct: 800 YNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNI---LIGGYGRKYEFDKCFDLLK 856
Query: 210 EMIEKGHKPSQVSF 223
EM + G P+ VS+
Sbjct: 857 EMEDNGTMPNVVSY 870
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 97/219 (44%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G PD +++ L D Y + + + A + E D + + + + ++ L GQ
Sbjct: 683 MKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQ 742
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA ++L G P+ YN I Y L A +D M ++G+ P+ YN
Sbjct: 743 IEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNC 802
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
R F D+ ++ +M G P+ ++ L+ R+ + + L +M + G
Sbjct: 803 LIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNG 862
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
++ L + LC KL+EA+ +M ++G P+
Sbjct: 863 TMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPN 901
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 76/193 (39%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+R G+ P S L+D K +Q + + + D P Y I +
Sbjct: 508 LRNEGIFPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSD 567
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
K ++ MK P YN I C ++++DA L DEM+ + L P+ TYN
Sbjct: 568 VGKGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNT 627
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + S+ + RM P+ + L+K + VE A + +M ++G
Sbjct: 628 LIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQG 687
Query: 181 FGSYILVSDVLFD 193
F +LFD
Sbjct: 688 FVPDAFTFSILFD 700
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 86/190 (45%), Gaps = 4/190 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G+KP + +Y+ LI + C +E KI +M + PD++ Y ++ + G
Sbjct: 998 MKTSGIKPTLKTYHLLISL-CTKEGIELTKKIFGEM---SLQPDLLVYNGVLHCYAVHGD 1053
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA ++ K+M E D YN+ I +L + L+DEM + + P A TY++
Sbjct: 1054 MDKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMKAREMEPEADTYDI 1113
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ D ++ Y M G L + LV K + + + A + ++M +
Sbjct: 1114 IVKGHCEMKDYMGAYVWYREMQEKGLLLDVCIGDELVSGLKEEWRSKEAENVISEMNGRK 1173
Query: 181 FGSYILVSDV 190
G I+ D+
Sbjct: 1174 LGDVIVDEDL 1183
Score = 44.3 bits (103), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 36/189 (19%), Positives = 81/189 (42%), Gaps = 17/189 (8%)
Query: 93 AKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS 152
+K + +A+ L + +G+ P++ + L + R + N++ ++ + P+
Sbjct: 495 SKMISEAADLFFALRNEGIFPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFM 554
Query: 153 CMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMI 212
++ + V L+L+N M + + +VL D LC + ++ +AE+ F EM+
Sbjct: 555 YGKAIQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEML 614
Query: 213 EKGHKPSQVSFR----------------RIKALMELANKQEALQNLSNKM-ALFGPSMIP 255
+ PS +++ +++ M+ N + +L + + LF M+
Sbjct: 615 ARRLLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVE 674
Query: 256 KREEYLAEM 264
E L EM
Sbjct: 675 DAENVLTEM 683
>gi|359491272|ref|XP_003634254.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Vitis vinifera]
Length = 450
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 122/270 (45%), Gaps = 35/270 (12%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVE----------------------------KAYKI 32
M E G D+ S+N ++DV CK ++VE +A++
Sbjct: 162 MHEHGCVQDLNSFNTILDVLCKSKRVEMADNKLFKVFRGRFRILLKGFFRAGQLKEAWEF 221
Query: 33 VEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCI 92
+M+ DV++YT+++ G G+ G+ KA+ V EM G P A YNA I+ C
Sbjct: 222 FLQMKKRKCEIDVVTYTTVVHGFGVAGEVRKAQRVFNEMIGEGVLPSVATYNAFIQVLCK 281
Query: 93 AKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS 152
+ +A + +EM+ KG PN+TTYN+ R + + RM C PN Q
Sbjct: 282 KDNVENAISVFEEMLRKGYMPNSTTYNVVIRGLCHVGRMEKAMEFMARMKDDECEPNVQI 341
Query: 153 CMFLVKLCKRQEKVEIALQLWNDMVEK----GFGSY-ILVSDVLFDLLCDMGKLVEAEKS 207
+++ E++E L ++ M + +Y IL+S + D L+ A K
Sbjct: 342 YNVVIRYFCDAEEIEKGLNVFEKMGDADCLPNLDTYNILISAMFVRKKSDY--LLTAGKL 399
Query: 208 FLEMIEKGHKPSQVSFRRIKALMELANKQE 237
+EM+E+G P + +F R+ + L Q+
Sbjct: 400 LIEMVERGFLPRKFTFNRVLDGLLLTGNQD 429
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 107/230 (46%), Gaps = 8/230 (3%)
Query: 12 SYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEM 71
S++ ID+ + R + + +V++MR + P+ ++ I G+PD+A + M
Sbjct: 103 SFDHAIDIAGRLRDYKTLWTLVDRMRTRRLGPNPKTFAIITERYVSAGKPDRAIKIFFSM 162
Query: 72 KEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDL 131
E+GC D ++N + C +KR+ A + + V +G + + + F+ + L
Sbjct: 163 HEHGCVQDLNSFNTILDVLCKSKRVEMADNKLFK-VFRG------RFRILLKGFFRAGQL 215
Query: 132 RSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVL 191
+ +W + +M C + + +V +V A +++N+M+ +G + +
Sbjct: 216 KEAWEFFLQMKKRKCEIDVVTYTTVVHGFGVAGEVRKAQRVFNEMIGEGVLPSVATYNAF 275
Query: 192 FDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEALQ 240
+LC + A F EM+ KG+ P+ ++ I+ L + ++A++
Sbjct: 276 IQVLCKKDNVENAISVFEEMLRKGYMPNSTTYNVVIRGLCHVGRMEKAME 325
>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g04760, chloroplastic; Flags: Precursor
gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 602
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 105/217 (48%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
+PD+ +YN LI+ +CK +++ A +++++MR +D SPD ++Y +IG L G+ D A
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 214
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
VL ++ C P Y I + + +A LMDEM+ +GL P+ TYN R
Sbjct: 215 VLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC 274
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+ ++ + + GC P+ S L++ Q K E +L M + ++
Sbjct: 275 KEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 334
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+L LC GK+ EA M EKG P S+
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSY 371
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 115/240 (47%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P++V+Y+ LI C+D ++E+A +++ M+++ ++PD SY +I G+ D A +
Sbjct: 331 PNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEF 390
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L+ M GC PD YN + C + A + ++ E G SPN+++YN F +
Sbjct: 391 LETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWS 450
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
S D + ++ MM G P+ + ++ R+ V+ A +L DM F ++
Sbjct: 451 SGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVT 510
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMA 247
+++ C ++ +A M+ G +P++ ++ + + A + L+N +
Sbjct: 511 YNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLV 570
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 110/266 (41%), Gaps = 2/266 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR PD V+YN +I C +++ A K++ ++ ++ P VI+YT +I L G
Sbjct: 184 MRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGG 243
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A ++ EM G PD YN IR C + A ++ + KG P+ +YN+
Sbjct: 244 VDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNI 303
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
R L +M C PN + L+ R K+E A+ L M EKG
Sbjct: 304 LLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKG 363
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
D L C G+L A + MI G P V++ + A + K +
Sbjct: 364 LTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQAL 423
Query: 241 NLSNKMALFGPSMIPKREEYLAEMSA 266
+ K+ G S P Y SA
Sbjct: 424 EIFGKLGEVGCS--PNSSSYNTMFSA 447
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 108/224 (48%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+KPD+ +YN +I CK+ V++A+++V + + PDVISY ++ L G+
Sbjct: 254 MLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGK 313
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++ ++ +M C P+ Y+ I C ++ +A L+ M EKGL+P+A +Y+
Sbjct: 314 WEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDP 373
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPN-TQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
F L + M+ GCLP+ L LCK K + AL+++ + E
Sbjct: 374 LIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCK-NGKADQALEIFGKLGEV 432
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G + +F L G + A LEM+ G P ++++
Sbjct: 433 GCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITY 476
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 105/226 (46%), Gaps = 1/226 (0%)
Query: 21 CKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDA 80
C+ ++ ++E M + +PDVI T +I G + KA V++ ++++G PD
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158
Query: 81 AAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCR 140
AYNA I +C R+ DA+ ++D M K SP+ TYN+ L + + +
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 141 MMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGK 200
++ C P + L++ + V+ AL+L ++M+ +G + + + +C G
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 201 LVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKM 246
+ A + + KG +P +S+ + + K E + L KM
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKM 324
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 84/173 (48%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PDIV+YN ++ CK+ + ++A +I K+ + SP+ SY ++ L G +A
Sbjct: 398 GCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRA 457
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++ EM G PD YN+ I C + +A L+ +M P+ TYN+
Sbjct: 458 LHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLG 517
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
F ++ + + N+ M+G GC PN + L++ A++L ND+V
Sbjct: 518 FCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLV 570
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E+G P+ SYN + +A ++ +M I PD I+Y S+I L G D
Sbjct: 431 EVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVD 490
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
+A ++L +M+ +P YN + +C A R+ DA +++ MV G PN TTY +
Sbjct: 491 EAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLI 550
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 55/107 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ PD ++YN +I C++ V++A++++ MR + P V++Y ++ G +
Sbjct: 464 MMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHR 523
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMV 107
+ A +VL+ M GC P+ Y I A +A L +++V
Sbjct: 524 IEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLV 570
>gi|449460167|ref|XP_004147817.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Cucumis sativus]
Length = 942
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 115/241 (47%), Gaps = 1/241 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E + D Y LI YC +V+ A +I + M + + + S+I G +G
Sbjct: 352 MMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGH 411
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA +VL MK++ PD+ YN + +C + A L DEM KG++ TYN
Sbjct: 412 VNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNT 471
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + + +++ M G PN + L+ + + A+ +W D + KG
Sbjct: 472 LLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKG 531
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
F I + + + C M KLV+A++ FL+M E G P ++++R I ++ N EAL
Sbjct: 532 FTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEAL 591
Query: 240 Q 240
+
Sbjct: 592 K 592
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 120/254 (47%), Gaps = 15/254 (5%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G+ PDI SY +++ YCK+ +V++A+ V++M P+V++Y S+I G +G
Sbjct: 247 MIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGD 306
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A+ VL M E G ++ Y I+ YC ++ A L+ M+EK L + Y +
Sbjct: 307 VCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGV 366
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCK-----RQEKVEIALQLWN 174
+ + + + + M+ G NT C L+ CK + +V ++++ WN
Sbjct: 367 LIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWN 426
Query: 175 DMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELA 233
+ +G + L D C ++A K EM KG + V++ +K L +
Sbjct: 427 -LKPDSYG-----YNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVG 480
Query: 234 NKQEALQ--NLSNK 245
+ + AL NL +K
Sbjct: 481 HVEHALHIWNLMHK 494
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 118/283 (41%), Gaps = 39/283 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ + P++V+Y LI +C ++KAY KM D+ I+P++I + I+ L G+
Sbjct: 632 MKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGK 691
Query: 61 PDKARDVLKEMKEYGCYPDAA-------------------------------------AY 83
D+A +L ++ + P AA Y
Sbjct: 692 IDEANLILHQIADID--PIAAHAHSVELPKSDLRHLETQKIVDSFGKKAMSIPISNNIVY 749
Query: 84 NAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMG 143
N AI C +K + D ++ +++ KG P+ TY + ++ L M+
Sbjct: 750 NIAITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAFCLRDDMIN 809
Query: 144 TGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVE 203
G +PN L+ + ++ A +L+N + KG ++ + L D C G+ E
Sbjct: 810 AGLVPNIVVYNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCKGGRTTE 869
Query: 204 AEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKM 246
A + +M E+G PS +++ + + + K E L N+M
Sbjct: 870 ALELKDKMREEGICPSSITYSTLIHGLYMEGKSEQSVGLLNEM 912
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 81/176 (46%)
Query: 11 VSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKE 70
+ YN I CK + ++ +I+ + + PD +Y S+I VG+ ++A + +
Sbjct: 747 IVYNIAITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAFCLRDD 806
Query: 71 MKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSND 130
M G P+ YNA I C + L A L +++ KGLSP TYN +
Sbjct: 807 MINAGLVPNIVVYNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCKGGR 866
Query: 131 LRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+ L +M G P++ + L+ + K E ++ L N+M++ G GS ++
Sbjct: 867 TTEALELKDKMREEGICPSSITYSTLIHGLYMEGKSEQSVGLLNEMMKAGKGSSVM 922
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 65/141 (46%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PD +Y LI +V +A+ + + M + + P+++ Y ++I GL G D+A
Sbjct: 776 GFCPDNYTYCSLIHACSAVGKVNEAFCLRDDMINAGLVPNIVVYNALINGLCKSGNLDRA 835
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
R + ++ G P YN I YC R +A L D+M E+G+ P++ TY+
Sbjct: 836 RRLFNKLARKGLSPTVVTYNTLIDGYCKGGRTTEALELKDKMREEGICPSSITYSTLIHG 895
Query: 125 FYWSNDLRSSWNLYCRMMGTG 145
Y S L MM G
Sbjct: 896 LYMEGKSEQSVGLLNEMMKAG 916
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 101/226 (44%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G P + S N L+ ++ + KA + E+M I PD+ SYT ++ G+
Sbjct: 212 MGKCGRVPSLRSCNSLLSNLVQNGEAFKALLVYEQMIALGILPDIFSYTIMVNAYCKEGR 271
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + +KEM+ C P+ YN+ I Y + A ++ M EKG+ N+ TY L
Sbjct: 272 VDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTL 331
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + + L MM + L+ +V+ AL++ + M++ G
Sbjct: 332 LIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVG 391
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ + L + C +G + +A + + M + KP + +
Sbjct: 392 LKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTL 437
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 105/261 (40%), Gaps = 35/261 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ +KPD YN L+D +CK KA+K+ ++M ++ ++ V++Y +++ L VG
Sbjct: 422 MKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGH 481
Query: 61 PDKARDVLKEMKEYGCYPDAAAY-----------------------------------NA 85
+ A + M + G P+ Y N
Sbjct: 482 VEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNT 541
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
I +C ++L A + +M E G P+ TY + +L + L G
Sbjct: 542 MICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDG 601
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
+T+ L+ R E+++ L +M + ++ L CD G + +A
Sbjct: 602 ISSSTEMYNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAY 661
Query: 206 KSFLEMIEKGHKPSQVSFRRI 226
++ +MI+KG P+ + +I
Sbjct: 662 NAYFKMIDKGIAPNIIIGSKI 682
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 62/110 (56%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ P+IV YN LI+ CK +++A ++ K+ + +SP V++Y ++I G G+
Sbjct: 807 MINAGLVPNIVVYNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCKGGR 866
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKG 110
+A ++ +M+E G P + Y+ I + + + GL++EM++ G
Sbjct: 867 TTEALELKDKMREEGICPSSITYSTLIHGLYMEGKSEQSVGLLNEMMKAG 916
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 88/204 (43%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV P+ V+Y L+D + K ++A I + + + + Y ++I G + +
Sbjct: 492 MHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEK 551
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A+++ +MKE G PD Y I YC L +A L D G+S + YN
Sbjct: 552 LVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNS 611
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ S +L+ L M PN + L+ + ++ A + M++KG
Sbjct: 612 LITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKG 671
Query: 181 FGSYILVSDVLFDLLCDMGKLVEA 204
I++ + L GK+ EA
Sbjct: 672 IAPNIIIGSKIVSSLYRHGKIDEA 695
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 95/221 (42%), Gaps = 4/221 (1%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
RE P + ++ ++ V+ + + A + + M P + S S++ L G+
Sbjct: 180 REFSFSPTV--FDMILKVFAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGEA 237
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
KA V ++M G PD +Y + YC R+ +A + EM PN TYN
Sbjct: 238 FKALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSL 297
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKG 180
+ D+ + + M G N+++ L+K CKR + +E A +L M+EK
Sbjct: 298 IDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQ-MEQAEKLIGCMMEKN 356
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQV 221
V VL C G++ +A + M++ G K + V
Sbjct: 357 LFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTV 397
>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
Length = 443
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 119/247 (48%), Gaps = 3/247 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD+V+ + +ID CK ++ A +I + M ++P+ + Y+++I GL +
Sbjct: 165 MTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARK 224
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A ++L +MK+ C PD YN I C + + A DEM+E G P+ TYN+
Sbjct: 225 MDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNI 284
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
F + + ++ ++ M + C PN + L+ LCKR++ + +L + M E+
Sbjct: 285 LISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASL-YYQHMKER 343
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
G V L D LC GKL F EM G SQ R I L + AN+ +
Sbjct: 344 GCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQTRTRLIFHLCK-ANRVDEA 402
Query: 240 QNLSNKM 246
+L N +
Sbjct: 403 VSLFNAI 409
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 106/220 (48%), Gaps = 2/220 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G P I +YN L++ CK ++E+A ++ K+ D +PDV++YTS+I GLG + +A
Sbjct: 64 GCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEA 123
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ KEM G D Y A IR A ++ AS + M +G P+ T +
Sbjct: 124 YKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDG 183
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGS 183
+ + ++ ++ M G PN L+ LCK + K++ AL++ M +
Sbjct: 184 LCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKAR-KMDCALEMLAQMKKAFCTP 242
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ ++L D LC G + A F EM+E G KP ++
Sbjct: 243 DTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTY 282
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 101/220 (45%), Gaps = 2/220 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PD+V+Y LID K ++ +AYK+ ++M ++ D + YT++I GL G+ +A
Sbjct: 99 GCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQA 158
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
V K M GC PD + I C A R+ A + M +GL+PN Y+
Sbjct: 159 SSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHG 218
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGS 183
+ + + + +M C P+T + L+ LCK + V A +++M+E G
Sbjct: 219 LCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGD-VAAARAFFDEMLEAGCKP 277
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ ++L C G A F +M P+ V++
Sbjct: 278 DVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTY 317
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 111/245 (45%), Gaps = 2/245 (0%)
Query: 12 SYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEM 71
+++ LI+ K + +A+ + ++ + D+ +YT+I+ L + +A +++++
Sbjct: 1 TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60
Query: 72 KEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDL 131
GC P A YNA + C RL +A L+ ++V+ G +P+ TY
Sbjct: 61 TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120
Query: 132 RSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVL 191
++ L+ M G +T L++ + K+ A ++ M +G ++ +
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTM 180
Query: 192 FDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQE-ALQNLSN-KMALF 249
D LC G++ A + F M +G P++V + + + A K + AL+ L+ K A
Sbjct: 181 IDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFC 240
Query: 250 GPSMI 254
P I
Sbjct: 241 TPDTI 245
>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
[Arabidopsis thaliana]
Length = 602
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 121/218 (55%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ P+++++N L+DV+ K+ ++++A ++ ++M ISP++I+Y +++ G + + +A
Sbjct: 294 IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEAN 353
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
++L M C PD + + I+ YC+ KR+ D + + ++GL NA TY++ + F
Sbjct: 354 NMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGF 413
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
S ++ + L+ M+ G LP+ + L+ K+E AL+++ D+ + I
Sbjct: 414 CQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGI 473
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + + +C GK+ +A F + KG KP+ +++
Sbjct: 474 VMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTY 511
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 114/223 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E VK D+ +Y+ +ID C+D ++ A + ++M + I V++Y S++ GL G+
Sbjct: 219 MEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGK 278
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ +LK+M P+ +N + + +L++A+ L EM+ +G+SPN TYN
Sbjct: 279 WNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNT 338
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ N L + N+ M+ C P+ + L+K ++V+ ++++ ++ ++G
Sbjct: 339 LMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRG 398
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + +L C GK+ AE+ F EM+ G P +++
Sbjct: 399 LVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTY 441
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 106/224 (47%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
++G +PD ++N LI+ C + +V KA +V++M + PD+++Y SI+ G+ G
Sbjct: 151 KLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTS 210
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
A D+L++M+E D Y+ I + C + A L EM KG+ + TYN
Sbjct: 211 LAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLV 270
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
R + L M+ +PN + L+ + ++ K++ A +L+ +M+ +G
Sbjct: 271 RGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGIS 330
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
I+ + L D C +L EA M+ P V+F +
Sbjct: 331 PNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSL 374
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 117/245 (47%), Gaps = 5/245 (2%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ +I + N +I+ +C+ + AY ++ K+ PD ++ ++I GL L G+ KA
Sbjct: 118 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKA 177
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++ M E GC PD YN+ + C + A ++ +M E+ + + TY+
Sbjct: 178 VVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDS 237
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGS 183
+ ++ +L+ M G + + LV+ LCK + + AL L DMV +
Sbjct: 238 LCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGAL-LLKDMVSREIVP 296
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLS 243
++ +VL D+ GKL EA + + EMI +G P+ +++ LM+ Q L +
Sbjct: 297 NVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITY---NTLMDGYCMQNRLSEAN 353
Query: 244 NKMAL 248
N + L
Sbjct: 354 NMLDL 358
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 94/212 (44%), Gaps = 37/212 (17%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ P+I++YN L+D YC ++ +A +++ M SPD++++TS+I G +V + D
Sbjct: 328 GISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDG 387
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF-- 122
V + + + G +A Y+ ++ +C + +++ A L EMV G+ P+ TY +
Sbjct: 388 MKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDG 447
Query: 123 --------RVFYWSNDLRSS-------------------------WNLYCRMMGTGCLPN 149
+ DL+ S WNL+C + G PN
Sbjct: 448 LCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPN 507
Query: 150 TQSCMFLVK-LCKRQEKVEIALQLWNDMVEKG 180
+ ++ LCK+ E + L M E G
Sbjct: 508 VMTYTVMISGLCKKGSLSEANI-LLRKMEEDG 538
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 71/145 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV PD+++Y L+D C + ++EKA +I E ++ + ++ YT+II G+ G+
Sbjct: 429 MVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGK 488
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A ++ + G P+ Y I C L +A+ L+ +M E G +PN TYN
Sbjct: 489 VEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNT 548
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTG 145
R DL +S L M G
Sbjct: 549 LIRAHLRDGDLTASAKLIEEMKSCG 573
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 97/208 (46%), Gaps = 4/208 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ + V+Y+ L+ +C+ +++ A ++ ++M + PDV++Y ++ GL G+ +KA
Sbjct: 398 GLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKA 457
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++ +++++ Y I C ++ DA L + KG+ PN TY +
Sbjct: 458 LEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISG 517
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
L + L +M G PN + L++ R + + +L +M GF +
Sbjct: 518 LCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSAD 577
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMI 212
++ D+L E +KSFL+M+
Sbjct: 578 ASSIKMVIDMLLSG----ELDKSFLDML 601
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/233 (20%), Positives = 98/233 (42%), Gaps = 3/233 (1%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P +V ++ + +Q +++ I+ ++ + +I + A V
Sbjct: 86 PGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSV 145
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L ++ + G PD +N I C+ ++ A L+D MVE G P+ TYN
Sbjct: 146 LGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICR 205
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
S D ++++ +M + + ++ R ++ A+ L+ +M KG S ++
Sbjct: 206 SGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVT 265
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ L LC GK + +M+ + P+ ++F L+++ K+ LQ
Sbjct: 266 YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITF---NVLLDVFVKEGKLQ 315
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 82/204 (40%)
Query: 23 DRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAA 82
D + + A + ++M P ++ ++ + Q + D K+++ G +
Sbjct: 66 DIKKDDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYT 125
Query: 83 YNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMM 142
N I +C + A ++ ++++ G P+ TT+N + + L RM+
Sbjct: 126 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMV 185
Query: 143 GTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLV 202
GC P+ + +V R +A + M E+ + + + D LC G +
Sbjct: 186 ENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCID 245
Query: 203 EAEKSFLEMIEKGHKPSQVSFRRI 226
A F EM KG K S V++ +
Sbjct: 246 AAISLFKEMETKGIKSSVVTYNSL 269
>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial; Flags: Precursor
Length = 602
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 121/218 (55%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ P+++++N L+DV+ K+ ++++A ++ ++M ISP++I+Y +++ G + + +A
Sbjct: 294 IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEAN 353
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
++L M C PD + + I+ YC+ KR+ D + + ++GL NA TY++ + F
Sbjct: 354 NMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGF 413
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
S ++ + L+ M+ G LP+ + L+ K+E AL+++ D+ + I
Sbjct: 414 CQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGI 473
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + + +C GK+ +A F + KG KP+ +++
Sbjct: 474 VMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTY 511
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 114/223 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E VK D+ +Y+ +ID C+D ++ A + ++M + I V++Y S++ GL G+
Sbjct: 219 MEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGK 278
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ +LK+M P+ +N + + +L++A+ L EM+ +G+SPN TYN
Sbjct: 279 WNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNT 338
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ N L + N+ M+ C P+ + L+K ++V+ ++++ ++ ++G
Sbjct: 339 LMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRG 398
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + +L C GK+ AE+ F EM+ G P +++
Sbjct: 399 LVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTY 441
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 104/224 (46%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
++G +PD ++N LI + +V +A +V++M + PDV++Y SI+ G+ G
Sbjct: 151 KLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTS 210
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
A D+L++M+E D Y+ I + C + A L EM KG+ + TYN
Sbjct: 211 LALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLV 270
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
R + L M+ +PN + L+ + ++ K++ A +L+ +M+ +G
Sbjct: 271 RGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGIS 330
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
I+ + L D C +L EA M+ P V+F +
Sbjct: 331 PNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSL 374
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 109/223 (48%), Gaps = 2/223 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ +I + N +I+ +C+ + AY ++ K+ PD ++ ++I GL L G+ +A
Sbjct: 118 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEA 177
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++ M E GC PD YN+ + C + A L+ +M E+ + + TY+
Sbjct: 178 VVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDS 237
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGS 183
+ ++ +L+ M G + + LV+ LCK + + AL L DMV +
Sbjct: 238 LCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGAL-LLKDMVSREIVP 296
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ +VL D+ GKL EA + + EMI +G P+ +++ +
Sbjct: 297 NVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTL 339
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 94/212 (44%), Gaps = 37/212 (17%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ P+I++YN L+D YC ++ +A +++ M SPD++++TS+I G +V + D
Sbjct: 328 GISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDG 387
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF-- 122
V + + + G +A Y+ ++ +C + +++ A L EMV G+ P+ TY +
Sbjct: 388 MKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDG 447
Query: 123 --------RVFYWSNDLRSS-------------------------WNLYCRMMGTGCLPN 149
+ DL+ S WNL+C + G PN
Sbjct: 448 LCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPN 507
Query: 150 TQSCMFLVK-LCKRQEKVEIALQLWNDMVEKG 180
+ ++ LCK+ E + L M E G
Sbjct: 508 VMTYTVMISGLCKKGSLSEANI-LLRKMEEDG 538
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 71/145 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV PD+++Y L+D C + ++EKA +I E ++ + ++ YT+II G+ G+
Sbjct: 429 MVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGK 488
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A ++ + G P+ Y I C L +A+ L+ +M E G +PN TYN
Sbjct: 489 VEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNT 548
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTG 145
R DL +S L M G
Sbjct: 549 LIRAHLRDGDLTASAKLIEEMKSCG 573
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 97/208 (46%), Gaps = 4/208 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ + V+Y+ L+ +C+ +++ A ++ ++M + PDV++Y ++ GL G+ +KA
Sbjct: 398 GLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKA 457
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++ +++++ Y I C ++ DA L + KG+ PN TY +
Sbjct: 458 LEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISG 517
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
L + L +M G PN + L++ R + + +L +M GF +
Sbjct: 518 LCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSAD 577
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMI 212
++ D+L E +KSFL+M+
Sbjct: 578 ASSIKMVIDMLLSG----ELDKSFLDML 601
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/233 (20%), Positives = 98/233 (42%), Gaps = 3/233 (1%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P +V ++ + +Q +++ I+ ++ + +I + A V
Sbjct: 86 PSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSV 145
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L ++ + G PD +N I+ + ++ +A L+D MVE G P+ TYN
Sbjct: 146 LGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICR 205
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
S D + +L +M + + ++ R ++ A+ L+ +M KG S ++
Sbjct: 206 SGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVT 265
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ L LC GK + +M+ + P+ ++F L+++ K+ LQ
Sbjct: 266 YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITF---NVLLDVFVKEGKLQ 315
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 85/204 (41%)
Query: 23 DRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAA 82
D + + A + ++M P ++ ++ + Q + D K+++ G +
Sbjct: 66 DIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYT 125
Query: 83 YNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMM 142
N I +C + A ++ ++++ G P+ TT+N + + + + L RM+
Sbjct: 126 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMV 185
Query: 143 GTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLV 202
GC P+ + +V R +AL L M E+ + + + D LC G +
Sbjct: 186 ENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCID 245
Query: 203 EAEKSFLEMIEKGHKPSQVSFRRI 226
A F EM KG K S V++ +
Sbjct: 246 AAISLFKEMETKGIKSSVVTYNSL 269
>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
Length = 717
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 117/237 (49%), Gaps = 3/237 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MRE G++ + V++ LID +CK ++ A VE+MR I P V+ Y ++I G +G+
Sbjct: 319 MRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGR 378
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D AR++++EM+ PD Y+ I YC L A L +M++KG+ P+A TY+
Sbjct: 379 MDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSS 438
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
R L + L+ M+ G P+ + L+ ++ VE AL L ++M+ KG
Sbjct: 439 LIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKG 498
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQE 237
++ VL + L + EA + ++ + P + + ALM +K E
Sbjct: 499 VLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKY---DALMLCCSKAE 552
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 129/265 (48%), Gaps = 4/265 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ PD+V++ LI CK +E+A +V +MR+ + + +++T++I G G
Sbjct: 284 MTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGF 343
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A ++EM++ G P YNA I YC R+ A L+ EM K + P+ TY+
Sbjct: 344 LDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYST 403
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ +L S++ L +M+ G LP+ + L++ ++++ A +L+ +M++ G
Sbjct: 404 IISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLG 463
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEAL 239
L D C G + +A EMI KG P V++ I L + A +EA
Sbjct: 464 VQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAH 523
Query: 240 QNLSNKMALFGPSMIPKREEYLAEM 264
+ L L+ +P +Y A M
Sbjct: 524 RLL---FKLYHEDPVPDNIKYDALM 545
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 106/224 (47%), Gaps = 1/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV P++ +YN L+ C ++E+A +V MR +P+ ++Y +++ G+
Sbjct: 143 MLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 202
Query: 61 PDKARDVLKEMKEYG-CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
D A V+ M+E G P+ +N+ + C A R+ A + DEMV +GL+P+ +YN
Sbjct: 203 LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 262
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ L S ++ M G +P+ + L+ + +E A+ L M E+
Sbjct: 263 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 322
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G + L D C G L +A + EM + G +PS V +
Sbjct: 323 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCY 366
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 117/250 (46%), Gaps = 2/250 (0%)
Query: 1 MREMG-VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVG 59
MRE G KP++V++N +++ CK ++E A K+ ++M E ++PDV+SY +++ G VG
Sbjct: 213 MREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVG 272
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
++ V EM + G PD + + I C A L A L+ +M E+GL N T+
Sbjct: 273 CLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFT 332
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
F L + M G P+ L+ + ++++A +L +M K
Sbjct: 333 ALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAK 392
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEA 238
++ + C +G L A + +M++KG P +++ I+ L E +A
Sbjct: 393 RVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDA 452
Query: 239 LQNLSNKMAL 248
+ N + L
Sbjct: 453 CELFENMLQL 462
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 3/200 (1%)
Query: 42 SPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASG 101
+P V +Y +++ L P AR L M +G P+ YN +R C RL +A G
Sbjct: 115 APSVPAYNAVLLALSDASLPS-ARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVG 173
Query: 102 LMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG-CLPNTQSCMFLVKLC 160
++ +M G +PNA TYN F + +L + + M G PN + +V
Sbjct: 174 VVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGL 233
Query: 161 KRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQ 220
+ ++E A +++++MV +G ++ + L C +G L E+ F EM ++G P
Sbjct: 234 CKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDV 293
Query: 221 VSFRR-IKALMELANKQEAL 239
V+F I A + N ++A+
Sbjct: 294 VTFTSLIHATCKAGNLEQAV 313
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 15/132 (11%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISY------------ 48
M GV PD+V+Y+ LI+ K + ++A++++ K+ ED PD I Y
Sbjct: 494 MIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEF 553
Query: 49 ---TSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDE 105
+++ G + G +A V + M + D + Y+ I +C +R A +
Sbjct: 554 KSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQ 613
Query: 106 MVEKGLSPNATT 117
M+ G SPN+T+
Sbjct: 614 MLRSGFSPNSTS 625
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 75/170 (44%), Gaps = 4/170 (2%)
Query: 83 YNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMM 142
++A IR+Y R A+ + G +P+ YN ++ L S+ M+
Sbjct: 86 FDALIRSYASLPRPSLAAAALAFAASAGYAPSVPAYNAVLLALSDAS-LPSARRFLSSML 144
Query: 143 GTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKL 201
G PN + LV+ LC R ++E A+ + DM G + + L C G+L
Sbjct: 145 RHGVAPNVYTYNILVRALCARG-RLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGEL 203
Query: 202 VEAEKSFLEMIEKGH-KPSQVSFRRIKALMELANKQEALQNLSNKMALFG 250
AE+ M E+G+ KP+ V+F + + A + E + + ++M G
Sbjct: 204 DGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREG 253
>gi|449462477|ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 597
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 106/202 (52%), Gaps = 8/202 (3%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
KP ++SY+ +ID CKDR+ ++A + E+M+ + ++P VISYTS++ ++A+
Sbjct: 239 KPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLMW--------EEAKR 290
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
+ EM G P+ +N I C ++ +A L++ M+++G+ PN TYN F
Sbjct: 291 LFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFC 350
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
DL S+ L+ M GC P+ L+ + KVE A++L+N M++ G +
Sbjct: 351 LVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVK 410
Query: 187 VSDVLFDLLCDMGKLVEAEKSF 208
L L GK+ +A+K F
Sbjct: 411 TYGALLTGLFQGGKVGDAKKLF 432
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 112/225 (49%), Gaps = 4/225 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV+P++V++N LIDV CK+ +V +A ++E M I P++++Y S+I G LVG
Sbjct: 295 MVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGD 354
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ AR++ M GC PD Y I YC ++ +A L + M++ G P+ TY
Sbjct: 355 LNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGA 414
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSC--MFLVKLCKRQEKVEIALQLWNDMVE 178
+ + + L+ M G +P +FL LCK E A++L+N +
Sbjct: 415 LLTGLFQGGKVGDAKKLFGVMKVYG-IPGDLYIYGIFLNGLCKNGCLFE-AMELFNKLKS 472
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I + L D LC GKL A + F ++ ++ +P V++
Sbjct: 473 YNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTY 517
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 106/232 (45%), Gaps = 14/232 (6%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G+ PD + N L++ C +V + ++ + PD+++YT++I GL + +
Sbjct: 122 MRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHR 181
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEK------GLSPN 114
KA + M++ GC P+A Y ++ C + A L EM+ P
Sbjct: 182 ISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPV 241
Query: 115 ATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWN 174
+Y++ + +L+ M G P S L+ E A +L+N
Sbjct: 242 VISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLMW--------EEAKRLFN 293
Query: 175 DMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+MV +G ++ +VL D+LC GK++EA+ MI++G P+ +++ +
Sbjct: 294 EMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSL 345
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 65/112 (58%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
++ +K DI +NCLID CK ++E A+++ EK+ E++ PDV++Y +I GQ
Sbjct: 470 LKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQ 529
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLS 112
KA + ++M++ GC PD Y IR + +K+L L+ MV++ +S
Sbjct: 530 VVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVS 581
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 92/214 (42%), Gaps = 35/214 (16%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGL---GL 57
M G +PD++ Y LI+ YCK +VE+A K+ M PDV +Y +++ GL G
Sbjct: 365 MPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGK 424
Query: 58 VGQPDKARDVLK--------------------------------EMKEYGCYPDAAAYNA 85
VG K V+K ++K Y D +N
Sbjct: 425 VGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNC 484
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
I C A +L A L +++ ++ L P+ TYN+ F + + L+ +M G
Sbjct: 485 LIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNG 544
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
C P+ + L++ +K+E ++L + MV++
Sbjct: 545 CTPDKITYATLIRGFFESKKLEKVVELLHMMVQR 578
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 92/214 (42%), Gaps = 8/214 (3%)
Query: 21 CKDRQVE--KAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYP 78
CK + +A++ M + +P + S+T ++ GL + + + +M+ G P
Sbjct: 70 CKTGNITAIQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISP 129
Query: 79 DAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLY 138
D N + C R+ + +M ++ +G P+ TY + + + + L+
Sbjct: 130 DCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLF 189
Query: 139 CRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK------GFGSYILVSDVLF 192
RM GC PN + L+K R + IAL+L +M+ F ++ ++
Sbjct: 190 TRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIII 249
Query: 193 DLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
D LC + EA F EM +G P+ +S+ +
Sbjct: 250 DALCKDRREDEARDLFEEMKVQGMTPTVISYTSL 283
>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 116/230 (50%), Gaps = 8/230 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+R+ G++P VS+N LI+ CK R +++ +++ + M + I PDV +Y+ +I GL G+
Sbjct: 249 IRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGR 308
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A + EM++ G P+ + A I C ++R+ A +M+ G+ P+ YN
Sbjct: 309 LDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNT 368
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
D+ + L M G P+ + L+ ++ +E A+++ M E+G
Sbjct: 369 LLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEG 428
Query: 181 FGSYILVSDVLFDLL----CDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+++ +V F L C G++ +AE++ EM+E G KP ++ +
Sbjct: 429 ----VVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMV 474
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 100/200 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M MGVKPD+V YN L++ CK V KA K+V++MR + PD I+YT++I G G
Sbjct: 354 MLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGD 413
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A ++ K M E G D A+ A I +C R+RDA + EMVE G+ P+ TY +
Sbjct: 414 LESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTM 473
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ +++ + L M G P + L+ +Q +++ A L M+ G
Sbjct: 474 VIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLG 533
Query: 181 FGSYILVSDVLFDLLCDMGK 200
+ ++L + C GK
Sbjct: 534 VTPDDITYNILLEGHCKNGK 553
Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 111/248 (44%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G++P+ +++ LID C+ R+++ A +M + PD++ Y +++ GL VG
Sbjct: 319 MQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGD 378
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KAR ++ EM+ G PD Y I YC L A + M E+G+ + +
Sbjct: 379 VNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTA 438
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F +R + M+ G P+ + ++ ++ V++ +L +M G
Sbjct: 439 LISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQING 498
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
++ +VL + LC G++ A M+ G P +++ + K E L
Sbjct: 499 HKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLL 558
Query: 241 NLSNKMAL 248
L N+ L
Sbjct: 559 KLRNEKGL 566
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 107/241 (44%), Gaps = 3/241 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E + PD+ +Y+ LI CK+ +++ A ++ ++M+ + P+ I++T++I G +
Sbjct: 284 MEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRR 343
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A + +M G PD YN + C + A L+DEM G+ P+ TY
Sbjct: 344 IDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTT 403
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ DL S+ + M G + + + L+ R +V A + +MVE G
Sbjct: 404 LIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAG 463
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
++ D C G + K EM GHKP +++ LM KQ ++
Sbjct: 464 MKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITY---NVLMNGLCKQGQMK 520
Query: 241 N 241
N
Sbjct: 521 N 521
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 89/192 (46%), Gaps = 4/192 (2%)
Query: 70 EMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSN 129
E+ EYG P YN I +C +RDA + +E+ ++GL P ++N S
Sbjct: 213 EILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSR 272
Query: 130 DLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSD 189
+L + L M P+ + L+ ++ ++++A QL+++M ++G +
Sbjct: 273 NLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFT 332
Query: 190 VLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLSNKMAL 248
L D C ++ A ++ +M+ G KP V + + L ++ + +A + L ++M +
Sbjct: 333 ALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKA-RKLVDEMRM 391
Query: 249 FGPSMIPKREEY 260
G M P + Y
Sbjct: 392 VG--MKPDKITY 401
>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Brachypodium distachyon]
Length = 878
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 117/241 (48%), Gaps = 1/241 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G D +YN ++D CK +V+KAY+++E+M+ + + P V +Y SI+ GL + +
Sbjct: 586 MSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDR 645
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + +E K G + Y++ I + R+ +A +++EM++KGL+PN T+N
Sbjct: 646 LDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNS 705
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ + + M C PNT + L+ R +K A W +M ++G
Sbjct: 706 LMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQG 765
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANK-QEAL 239
++ + L +G + +A F G P SF + M AN+ EA
Sbjct: 766 LIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASFNALIEGMSNANRPMEAY 825
Query: 240 Q 240
Q
Sbjct: 826 Q 826
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 110/226 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ P+++S N ++D CK Q+E+A++I E + +P+ ++Y S+I GLG G+
Sbjct: 411 MELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGK 470
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A + ++M + G + Y + IRN+ + R D + EM+ +G P+ T N
Sbjct: 471 IDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNT 530
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + ++ ++ M G LP+ +S L+ + + ++ M ++G
Sbjct: 531 YMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQG 590
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
F + + D LC GK+ +A + EM K P+ ++ I
Sbjct: 591 FALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSI 636
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 104/211 (49%), Gaps = 1/211 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P +YN +I Y + + AYK++E++R+ P V+S+ SI+ LG + D+A +
Sbjct: 314 PCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTL 373
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
MK+ P+ + YN I C+A R+ +A + DEM GL PN + N+
Sbjct: 374 FDVMKK-DAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCK 432
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+N L + ++ GC PN+ + L+ ++ K++ A +L+ M++ G + ++
Sbjct: 433 ANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPII 492
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
L G+ + K + EMI +G +P
Sbjct: 493 YTSLIRNFFMHGRKEDGHKIYKEMIRRGGRP 523
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 108/222 (48%), Gaps = 1/222 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+++G + + + L+ ++ Q+E A +V++++ + PD++ Y I G G
Sbjct: 202 MQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGS 261
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A E+K +G PD +Y + + C A RL +A L +M + P A YN
Sbjct: 262 VDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNT 321
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + ++ L R+ GC+P+ S ++ ++ KV+ AL L+ D+++K
Sbjct: 322 MIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLF-DVMKKD 380
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
I +++ D+LC G++ EA K EM G P+ +S
Sbjct: 381 AKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLS 422
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 89/176 (50%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G++ +++ Y+ LID + K ++++AY I+E+M + ++P+V ++ S++ L + D+A
Sbjct: 660 GIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEA 719
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ MKE C P+ Y+ I C ++ A EM ++GL PN TY
Sbjct: 720 LICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISG 779
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++ +++L+ R G +P++ S L++ + A Q++ + +G
Sbjct: 780 LAKVGNITDAYSLFERFKTNGGIPDSASFNALIEGMSNANRPMEAYQVFEETRLRG 835
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 117/273 (42%), Gaps = 36/273 (13%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSII---------- 52
E G P+ V+Y LID K +++ AY++ EKM D + I YTS+I
Sbjct: 448 ERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKE 507
Query: 53 ------------GG---LGLV----------GQPDKARDVLKEMKEYGCYPDAAAYNAAI 87
GG L L+ G+ +K R + ++MK +G PD +Y+ I
Sbjct: 508 DGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILI 567
Query: 88 RNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCL 147
A + R+ S + M ++G + +A YN S + ++ + M
Sbjct: 568 HGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVH 627
Query: 148 PNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKS 207
P + +V + ++++ A L+ + KG +++ L D +G++ EA
Sbjct: 628 PTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLI 687
Query: 208 FLEMIEKGHKPSQVSFRRI-KALMELANKQEAL 239
EM++KG P+ ++ + AL++ EAL
Sbjct: 688 LEEMMKKGLTPNVYTWNSLMDALVKTEEIDEAL 720
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 80/169 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ P++ ++N L+D K ++++A + M++ SP+ +Y+ +I GL V +
Sbjct: 691 MMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQK 750
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA +EM++ G P+ Y I + DA L + G P++ ++N
Sbjct: 751 YNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASFNA 810
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIA 169
+N ++ ++ GC N ++C+ L+ + E +E A
Sbjct: 811 LIEGMSNANRPMEAYQVFEETRLRGCRLNVKTCISLLDALNKTECLEQA 859
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 92/212 (43%)
Query: 15 CLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEY 74
L+ + R++E A++++ MR P +YT +IG L QP++A ++L++M++
Sbjct: 146 ALVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGALAEARQPERALELLRQMQDV 205
Query: 75 GCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSS 134
G + +R ++ A L+DE+ L P+ YN+ F + + +
Sbjct: 206 GYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMA 265
Query: 135 WNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDL 194
W + + G P+ S +V + + ++ A +L+ M + + +
Sbjct: 266 WKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMG 325
Query: 195 LCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ +A K + E+G PS VSF I
Sbjct: 326 YGSAERFDDAYKLLERLRERGCIPSVVSFNSI 357
>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
Length = 1059
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 102/204 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ D V+YN LI C + A +++ M I P+VI +T++I G
Sbjct: 746 MEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGN 805
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A+++ KEM +P+ YN+ I +CI RL DA + D MV KG P+ TYN
Sbjct: 806 LLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNT 865
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F S + L+C M G + + + L+ + K+ +A +++N MV+ G
Sbjct: 866 LITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCG 925
Query: 181 FGSYILVSDVLFDLLCDMGKLVEA 204
I+ ++L D LC+ GK+ +A
Sbjct: 926 VPPDIVTYNILLDCLCNNGKIEKA 949
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 110/223 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E+G++P++V YN +I+ CK+R + A +I M + I D ++Y ++I GL G+
Sbjct: 711 MAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGR 770
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +L++M + P+ + A I + L +A L EM+ + + PN TYN
Sbjct: 771 WTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNS 830
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F L + +++ M+ GC P+ + L+ + ++VE ++L+ +M +G
Sbjct: 831 LINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQG 890
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ L C GKL A+K F M++ G P V++
Sbjct: 891 LVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTY 933
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 111/226 (49%), Gaps = 6/226 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + + PD+ ++ LID + K +++A ++ ++M I P+ ++Y S+I GL + G+
Sbjct: 232 MTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGR 291
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A+ M GC+P+ YN I +C ++R+ D L M +GL + TYN
Sbjct: 292 LYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNT 351
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPN-TQSCMFLVKLCKRQEKVEIALQLWNDMV-- 177
+ LR + +++ M+ G P+ C+ L LC E + A+ +NDM
Sbjct: 352 LIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGE-IGSAMVKFNDMRSG 410
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
EK G I+ +++ LC K+ EA + F + +G KP ++
Sbjct: 411 EKYLG--IVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTY 454
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 106/218 (48%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ P+++ + LID + K+ + +A + ++M + P++++Y S+I G + G+ A+
Sbjct: 786 IDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAK 845
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+ M GC+PD YN I +C +KR+ D L EM +GL +A TYN +
Sbjct: 846 HMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGY 905
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ L + ++ RM+ G P+ + L+ K+E AL + D+ + I
Sbjct: 906 CQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDI 965
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ +++ +C K+ EA F + KG K +++
Sbjct: 966 ITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAY 1003
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 114/247 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++G +P IV+ L++ +C+ + ++A +V+ M + + P+V+ Y ++I GL
Sbjct: 676 MMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRD 735
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A ++ M++ G DA YN I C + R DA+ L+ +MV++ + PN +
Sbjct: 736 LNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTA 795
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F +L + NLY M+ PN + L+ Q ++ A +++ MV KG
Sbjct: 796 LIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKG 855
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
++ + L C ++ + K F EM +G ++ + A K Q
Sbjct: 856 CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQ 915
Query: 241 NLSNKMA 247
+ N+M
Sbjct: 916 KVFNRMV 922
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 104/223 (46%), Gaps = 1/223 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDED-ISPDVISYTSIIGGLGLVG 59
M + G +P++V YN LID CK+ V A +++ +M + ++ D+++Y +++ GL G
Sbjct: 161 MVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSG 220
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ +A +L++M + PD + A I + L +A L +M++ + PN TYN
Sbjct: 221 EWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYN 280
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
L + + M GC PN + L+ + +VE ++L+ M +
Sbjct: 281 SLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYRE 340
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
G + L C +GKL A+ F M+ G P ++
Sbjct: 341 GLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIIT 383
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 97/206 (47%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ D+V+YN L+ C + +A +I+ M I+PDV ++T++I G D+A+
Sbjct: 202 LAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQ 261
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
++ K+M + P+ YN+ I C+ RL A D M KG PN TYN F
Sbjct: 262 ELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGF 321
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
S + L+ RM G + +T + L+ + K+ +A +++ MV G I
Sbjct: 322 CKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDI 381
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEM 211
+ +L LC G++ A F +M
Sbjct: 382 ITHCILLHGLCVNGEIGSAMVKFNDM 407
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 105/227 (46%), Gaps = 1/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ D+ S+ LI +C+ ++ A I+ KM P ++++ S++ G L +
Sbjct: 91 MELFGISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNR 150
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKG-LSPNATTYN 119
A ++ M + G P+ YN I C + A L++EM +KG L+ + TYN
Sbjct: 151 IHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYN 210
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+S + R + + M P+ + L+ +Q ++ A +L+ M++
Sbjct: 211 TLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQS 270
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G + + L + LC G+L A+K+F M KG P+ V++ +
Sbjct: 271 SIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTL 317
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 86/181 (47%), Gaps = 2/181 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P++V+YN LI+ +CK R+VE K+ ++M E + D +Y ++I G VG+
Sbjct: 302 MASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGK 361
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A+D+ M G PD + + C+ + A ++M YN+
Sbjct: 362 LRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNI 421
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEK 179
++ + +W L+CR+ G P+ ++ + ++ LCK + E A +L+ M E
Sbjct: 422 MIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRRE-ADELFRRMKED 480
Query: 180 G 180
G
Sbjct: 481 G 481
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 97/226 (42%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G+ D+ S+ LI +C+ + A ++ KM P +++ S++ G +
Sbjct: 641 MENLGISHDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNR 700
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++ M E G P+ YN I C + L +A + M +KG+ +A TYN
Sbjct: 701 FQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNT 760
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
S + L M+ PN L+ ++ + A L+ +M+ +
Sbjct: 761 LISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRS 820
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
IL + L + C G+L +A+ F M+ KG P V++ +
Sbjct: 821 VHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTL 866
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 96/220 (43%), Gaps = 2/220 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P IV + ++ K + + + KM + IS D+ S+T +I + A +
Sbjct: 613 PSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALAL 672
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L +M + G P + + +C R ++A L+D M E GL PN YN
Sbjct: 673 LGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCK 732
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+ DL ++ ++ M G + + + L+ LC + A +L DMV++ ++
Sbjct: 733 NRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAA-RLLRDMVKRKIDPNVI 791
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
L D G L+EA+ + EMI + P+ +++ +
Sbjct: 792 FFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSL 831
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 89/182 (48%), Gaps = 2/182 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD+V+YN LI +CK ++VE K+ +M + + D +Y ++I G G+
Sbjct: 851 MVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGK 910
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A+ V M + G PD YN + C ++ A +++++ + + + TYN+
Sbjct: 911 LNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNI 970
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+ ++ ++ +W L+ + G + + + ++ LC+ + E A +L M E
Sbjct: 971 IIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRRE-ADKLCTRMKED 1029
Query: 180 GF 181
GF
Sbjct: 1030 GF 1031
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 63/128 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV PDIV+YN L+D C + ++EKA +VE ++ + D+I+Y II G+ +
Sbjct: 921 MVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDK 980
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + + + G DA AY I C R+A L M E G P+ Y+
Sbjct: 981 VKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDGFMPSERIYDE 1040
Query: 121 FFRVFYWS 128
R Y S
Sbjct: 1041 TLRDHYTS 1048
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 90/221 (40%), Gaps = 3/221 (1%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P +V + L+ R+ E ++M IS D+ S+T +I + A +
Sbjct: 63 PSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTILIHCFCRCSRLSLALSI 122
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L +M + G P + + + +C+ R+ DA L+ MV+ G PN YN
Sbjct: 123 LGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCK 182
Query: 128 SNDLRSSWNLYCRMMGTGCLPN--TQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ D+ + L M G L L LC E + A ++ DM ++ +
Sbjct: 183 NGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAA-RILRDMTKRRINPDV 241
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
L D G L EA++ + +M++ P+ V++ +
Sbjct: 242 FTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSL 282
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 106/234 (45%), Gaps = 5/234 (2%)
Query: 25 QVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYN 84
+ E A + +M P V+ +T ++ + + + + ++M+ +G D ++
Sbjct: 45 RFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFT 104
Query: 85 AAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGT 144
I +C RL A ++ +M++ G P+ T+ F N + +++L M+ +
Sbjct: 105 ILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKS 164
Query: 145 GCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG-FGSYILVSDVLFDLLCDMGKLVE 203
G PN L+ + V IAL+L N+M +KG + ++ + L LC G+ +
Sbjct: 165 GYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQ 224
Query: 204 AEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLSNKM--ALFGPSMI 254
A + +M ++ P +F I A ++ N EA Q L +M + GP+ +
Sbjct: 225 AARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEA-QELYKQMLQSSIGPNTV 277
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 98/241 (40%), Gaps = 27/241 (11%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ D +YN LI YC+ ++ A I M ++PD+I++ ++ GL + G+
Sbjct: 337 MYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGE 396
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +M+ Y AYN I C A ++ +A L + +G+ P+A TY +
Sbjct: 397 IGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTI 456
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCL------------PNTQSCMFLVKLCKRQEKVEI 168
+ R + L+ RM G + N Q + + +C ++ +
Sbjct: 457 MILGLCKNGPRREADELFRRMKEDGIICQAEDGHLGEHGTNNQVSLGTIIICPKRRR--- 513
Query: 169 ALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE------KSFLEMIEKGHKPSQVS 222
++E G Y L+ L + + + + L ++E+G+ P S
Sbjct: 514 ------SIMESGDLYYYYSDTTLWSSLVGLIPIASSSSVKGFVRRHLLLLERGNNPESRS 567
Query: 223 F 223
F
Sbjct: 568 F 568
>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
Length = 552
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 117/237 (49%), Gaps = 3/237 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MRE G++ + V++ LID +CK ++ A VE+MR I P V+ Y ++I G +G+
Sbjct: 177 MRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGR 236
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D AR++++EM+ PD Y+ I YC L A L +M++KG+ P+A TY+
Sbjct: 237 MDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSS 296
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
R L + L+ M+ G P+ + L+ ++ VE AL L ++M+ KG
Sbjct: 297 LIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKG 356
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQE 237
++ VL + L + EA + ++ + P + + ALM +K E
Sbjct: 357 VLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKY---DALMLCCSKAE 410
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 129/265 (48%), Gaps = 4/265 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ PD+V++ LI CK +E+A +V +MR+ + + +++T++I G G
Sbjct: 142 MTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGF 201
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A ++EM++ G P YNA I YC R+ A L+ EM K + P+ TY+
Sbjct: 202 LDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYST 261
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ +L S++ L +M+ G LP+ + L++ ++++ A +L+ +M++ G
Sbjct: 262 IISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLG 321
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEAL 239
L D C G + +A EMI KG P V++ I L + A +EA
Sbjct: 322 VQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAH 381
Query: 240 QNLSNKMALFGPSMIPKREEYLAEM 264
+ L L+ +P +Y A M
Sbjct: 382 RLL---FKLYHEDPVPDNIKYDALM 403
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 106/224 (47%), Gaps = 1/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV P++ +YN L+ C ++E+A +V MR +P+ ++Y +++ G+
Sbjct: 1 MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60
Query: 61 PDKARDVLKEMKEYG-CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
D A V+ M+E G P+ +N+ + C A R+ A + DEMV +GL+P+ +YN
Sbjct: 61 LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ L S ++ M G +P+ + L+ + +E A+ L M E+
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 180
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G + L D C G L +A + EM + G +PS V +
Sbjct: 181 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCY 224
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 120/248 (48%), Gaps = 3/248 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDE-DISPDVISYTSIIGGLGLVG 59
MR G P+ V+YN L+ +C+ +++ A ++V MR+E + P+++++ S++ GL G
Sbjct: 36 MRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAG 95
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ + AR V EM G PD +YN + YC L ++ + EM ++GL P+ T+
Sbjct: 96 RMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFT 155
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ +L + L +M G N + L+ ++ ++ AL +M +
Sbjct: 156 SLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKC 215
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEA 238
G ++ + L + C +G++ A + EM K KP V++ I ++ N A
Sbjct: 216 GIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSA 275
Query: 239 LQNLSNKM 246
Q L+ KM
Sbjct: 276 FQ-LNQKM 282
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 117/250 (46%), Gaps = 2/250 (0%)
Query: 1 MREMG-VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVG 59
MRE G KP++V++N +++ CK ++E A K+ ++M E ++PDV+SY +++ G VG
Sbjct: 71 MREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVG 130
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
++ V EM + G PD + + I C A L A L+ +M E+GL N T+
Sbjct: 131 CLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFT 190
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
F L + M G P+ L+ + ++++A +L +M K
Sbjct: 191 ALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAK 250
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEA 238
++ + C +G L A + +M++KG P +++ I+ L E +A
Sbjct: 251 RVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDA 310
Query: 239 LQNLSNKMAL 248
+ N + L
Sbjct: 311 CELFENMLQL 320
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 82/171 (47%), Gaps = 2/171 (1%)
Query: 71 MKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSND 130
M +G P+ YN +R C RL +A G++ +M G +PNA TYN F + +
Sbjct: 1 MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60
Query: 131 LRSSWNLYCRMMGTG-CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSD 189
L + + M G PN + +V + ++E A +++++MV +G ++ +
Sbjct: 61 LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120
Query: 190 VLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
L C +G L E+ F EM ++G P V+F I A + N ++A+
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAV 171
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 91/234 (38%), Gaps = 56/234 (23%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGL----- 55
M ++GV+PD +Y LID +CK+ VEKA + ++M + + PDV++Y+ +I GL
Sbjct: 317 MLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSAR 376
Query: 56 ------------------------------------------------GLVGQPDKARDV 67
GL+ + DK V
Sbjct: 377 TKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADK---V 433
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
+ M + D + Y+ I +C +R A +M+ G SPN+T+ R +
Sbjct: 434 YQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFE 493
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
+ + N ++ L + ++ L+ L +++ V+ + + M G
Sbjct: 494 EGMVVEADNAIQDLLTCCPLADAEASKALIDLNRKEGNVDALIDVLCGMARDGL 547
>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
Length = 1245
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 121/218 (55%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ P+++++N L+DV+ K+ ++++A ++ ++M ISP++I+Y +++ G + + +A
Sbjct: 284 IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEAN 343
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
++L M C PD + + I+ YC+ KR+ D + + ++GL NA TY++ + F
Sbjct: 344 NMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGF 403
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
S ++ + L+ M+ G LP+ + L+ K+E AL+++ D+ + I
Sbjct: 404 CQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGI 463
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + + +C GK+ +A F + KG KP+ +++
Sbjct: 464 VMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTY 501
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 114/223 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E VK D+ +Y+ +ID C+D ++ A + ++M + I V++Y S++ GL G+
Sbjct: 209 MEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGK 268
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ +LK+M P+ +N + + +L++A+ L EM+ +G+SPN TYN
Sbjct: 269 WNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNT 328
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ N L + N+ M+ C P+ + L+K ++V+ ++++ ++ ++G
Sbjct: 329 LMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRG 388
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + +L C GK+ AE+ F EM+ G P +++
Sbjct: 389 LVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTY 431
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 103/221 (46%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
++G +PD ++N LI + +V +A +V++M + PDV++Y SI+ G+ G
Sbjct: 141 KLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTS 200
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
A D+L++M+E D Y+ I + C + A L EM KG+ + TYN
Sbjct: 201 LALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLV 260
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
R + L M+ +PN + L+ + ++ K++ A +L+ +M+ +G
Sbjct: 261 RGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGIS 320
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I+ + L D C +L EA M+ P V+F
Sbjct: 321 PNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTF 361
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 117/246 (47%), Gaps = 5/246 (2%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ +I + N +I+ +C+ + AY ++ K+ PD ++ ++I GL L G+ +A
Sbjct: 108 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEA 167
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++ M E GC PD YN+ + C + A L+ +M E+ + + TY+
Sbjct: 168 VVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDS 227
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGS 183
+ ++ +L+ M G + + LV+ LCK + + AL L DMV +
Sbjct: 228 LCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGAL-LLKDMVSREIVP 286
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLS 243
++ +VL D+ GKL EA + + EMI +G P+ +++ LM+ Q L +
Sbjct: 287 NVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITY---NTLMDGYCMQNRLSEAN 343
Query: 244 NKMALF 249
N + L
Sbjct: 344 NMLDLM 349
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 113/272 (41%), Gaps = 37/272 (13%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ P+I++YN L+D YC ++ +A +++ M SPD++++TS+I G +V + D
Sbjct: 318 GISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDG 377
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF-- 122
V + + + G +A Y+ ++ +C + +++ A L EMV G+ P+ TY +
Sbjct: 378 MKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDG 437
Query: 123 --------RVFYWSNDLRSS-------------------------WNLYCRMMGTGCLPN 149
+ DL+ S WNL+C + G PN
Sbjct: 438 LCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPN 497
Query: 150 TQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSF 208
+ ++ LCK+ E + L M E G + L G L + K
Sbjct: 498 VMTYTVMISGLCKKGSLSEANI-LLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLI 556
Query: 209 LEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
EM G S + + ++ A K+ L+
Sbjct: 557 EEMKSCGFSADASSIKMVIDMLLSAMKRLTLR 588
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 76/159 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV PD+++Y L+D C + ++EKA +I E ++ + ++ YT+II G+ G+
Sbjct: 419 MVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGK 478
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A ++ + G P+ Y I C L +A+ L+ +M E G +PN TYN
Sbjct: 479 VEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNT 538
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKL 159
R DL +S L M G + S ++ +
Sbjct: 539 LIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDM 577
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/233 (20%), Positives = 98/233 (42%), Gaps = 3/233 (1%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P +V ++ + +Q +++ I+ ++ + +I + A V
Sbjct: 76 PSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSV 135
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L ++ + G PD +N I+ + ++ +A L+D MVE G P+ TYN
Sbjct: 136 LGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICR 195
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
S D + +L +M + + ++ R ++ A+ L+ +M KG S ++
Sbjct: 196 SGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVT 255
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ L LC GK + +M+ + P+ ++F L+++ K+ LQ
Sbjct: 256 YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITF---NVLLDVFVKEGKLQ 305
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 36 MRDEDISPDVISYTSIIGGLGLVGQP---DKARDVLKEMKEYGCYPDAAAYNAAIRNYCI 92
M D ++ D + Y G + G+ A ++ KEM + G P+ Y++ I +C
Sbjct: 687 MVDLELPTDAVHYAHRAGRMRRPGRKMTVVTAEELHKEMIQRGIAPNTITYSSLIDGFCK 746
Query: 93 AKRLRDASGLMDEMVEKG 110
RL +A+ ++D MV KG
Sbjct: 747 ENRLDEANQMLDLMVTKG 764
>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Vitis vinifera]
Length = 898
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 111/235 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E G D +YN +ID +CK +V KAY+++E+M+ + P V++Y S+I GL + +
Sbjct: 605 MKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDR 664
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + +E K G + Y++ I + R+ +A +M+E+++KGL+PN T+N
Sbjct: 665 LDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNC 724
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ + + M C PN + L+ R K A W +M + G
Sbjct: 725 LLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLG 784
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANK 235
+ + L G ++EA F G P S+ + + ANK
Sbjct: 785 LKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANK 839
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 112/226 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ P++++ N +ID CK +++E+A I E M D+ +P+ ++++S+I GLG G+
Sbjct: 430 MERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGR 489
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A + ++M + G P A Y + IR++ R D + EMV G SP+ T N
Sbjct: 490 VDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINT 549
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + + L+ + G +P+ +S L+ + +L+ M E+G
Sbjct: 550 YMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQG 609
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + D C GK+ +A + EM KGH P+ V++ +
Sbjct: 610 CVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSV 655
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 111/226 (49%), Gaps = 1/226 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ + DIV YN ID + K +V+ ++K +M+ + PD ++YTS+IG L +
Sbjct: 256 MKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSMIGVLCKANR 315
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A ++ +++++ P A AYN I Y A + +A GL++ KG P+ YN
Sbjct: 316 LDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNC 375
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + ++ M +PN + L+ + R+ K+ AL++ +DM G
Sbjct: 376 ILTCLGKKRRVEEALRIF-EEMKRDAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAG 434
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+L +++ D LC KL EA F M +K P+ V+F +
Sbjct: 435 LFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSL 480
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 116/240 (48%), Gaps = 4/240 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G+ PD V+Y +I V CK ++++A ++ E++ P +Y ++I G G G+
Sbjct: 291 MKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGK 350
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A +L+ K G P AYN + +R+ +A + +EM ++ PN TYN+
Sbjct: 351 FDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEM-KRDAVPNVPTYNI 409
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEK 179
+ L ++ + M G PN + ++ +LCK Q K+E A ++ M +K
Sbjct: 410 LIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQ-KLEEACSIFEGMDDK 468
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEA 238
+ L D L G++ +A + +M++ GH P + + I++ + K++
Sbjct: 469 VCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDG 528
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 94/219 (42%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P+ V+++ LID K +V+ AY + EKM D P I YTS+I G+ + +
Sbjct: 472 PNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKI 531
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
KEM GC PD N + A L E+ G P+A +Y++
Sbjct: 532 YKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVK 591
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ ++ L+ M GC+ +T + ++ + KV A QL +M KG ++
Sbjct: 592 AGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVT 651
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ D L + +L EA F E G K + V + +
Sbjct: 652 YGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSL 690
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 83/169 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+ + G+ P++ ++NCL+D K ++ +A + M+D P+ I+Y+ +I GL V +
Sbjct: 710 LMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRK 769
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA +EM++ G P+ Y I A + +ASGL G P++ +YN
Sbjct: 770 FNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNA 829
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIA 169
+N ++ L+ GC +T++C+ L+ + E +E A
Sbjct: 830 MIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDALHKAECLEQA 878
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 90/191 (47%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+K ++V Y+ LID + K ++++AY I+E++ + ++P+V ++ ++ L + ++A
Sbjct: 679 GIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEA 738
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ MK+ C P+ Y+ I C ++ A EM + GL PN TY
Sbjct: 739 LICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISG 798
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ ++ + L+ R G +P++ S +++ K A L+ + KG +
Sbjct: 799 LAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIH 858
Query: 185 ILVSDVLFDLL 195
VL D L
Sbjct: 859 TKTCVVLLDAL 869
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 88/205 (42%)
Query: 22 KDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAA 81
K R++ +A+ I++ MR P +YT +IG L V +PD + +M+E G +
Sbjct: 172 KSRKLREAFDIIQTMRKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVH 231
Query: 82 AYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRM 141
+ IR + R+ A L+DEM L + YN+ F + + SW + M
Sbjct: 232 LFTTLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEM 291
Query: 142 MGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKL 201
G +P+ + ++ + + +++ A++L+ + + + + GK
Sbjct: 292 KSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKF 351
Query: 202 VEAEKSFLEMIEKGHKPSQVSFRRI 226
EA KG PS +++ I
Sbjct: 352 DEAYGLLERQKAKGSIPSVIAYNCI 376
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 104/240 (43%), Gaps = 1/240 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G P + Y LI + K + E +KI ++M SPD+ + + + G+
Sbjct: 500 MLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGE 559
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+K R + +E+ +G PDA +Y+ I A + L M E+G + YN
Sbjct: 560 TEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNA 619
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F S + ++ L M G P + ++ + ++++ A L+ + G
Sbjct: 620 VIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNG 679
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEAL 239
++V L D +G++ EA E+++KG P+ ++ + AL++ EAL
Sbjct: 680 IKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEAL 739
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 89/206 (43%), Gaps = 2/206 (0%)
Query: 30 YKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRN 89
++ EK ++ P+ +Y S++ + + D +L+EM G P + + N
Sbjct: 112 FQWAEKQTEKVHCPE--AYNSLLMVMARNTEFDHLERILEEMSLSGFGPSSNISIELVAN 169
Query: 90 YCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPN 149
+++LR+A ++ M + P + Y + + L+ +M G N
Sbjct: 170 CVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVN 229
Query: 150 TQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFL 209
L+++ R+ +V+ AL L ++M + I++ +V D GK+ + K F
Sbjct: 230 VHLFTTLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFH 289
Query: 210 EMIEKGHKPSQVSFRRIKALMELANK 235
EM G P V++ + ++ AN+
Sbjct: 290 EMKSHGLMPDDVTYTSMIGVLCKANR 315
>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Cucumis sativus]
gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Cucumis sativus]
Length = 783
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 131/285 (45%), Gaps = 35/285 (12%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIG------- 53
M E G+ PD V+YN LI YCK ++ KA++++++M + + D + +I+
Sbjct: 414 MEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKK 473
Query: 54 -----------------------GLGLVG-----QPDKARDVLKEMKEYGCYPDAAAYNA 85
G+ ++G + D+A ++ EMKE P YN+
Sbjct: 474 LDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNS 533
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
I C ++++ A ++EM+E GL P+ TTYN+ F ++ ++ + M+
Sbjct: 534 VIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENL 593
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
P+ +C L++ R+ +E AL+L+N +V KG ++ + + LC GK A
Sbjct: 594 FKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAY 653
Query: 206 KSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFG 250
EM K P Q +++ I A + A + + + + KM G
Sbjct: 654 DLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEAEEFTLKMVESG 698
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 116/255 (45%), Gaps = 2/255 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +M V PD+V+YN LID + R + Y ++E+M + + + ++Y I+ + G
Sbjct: 344 MEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGN 403
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A L +M+E G PD YN I YC A ++ A +MDEM KGL + T N
Sbjct: 404 MTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNT 463
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
L ++NL C G + + S L+ + EK + AL LW++M E+
Sbjct: 464 ILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQ 523
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ + + LC K+ +A EM+E G P + ++ I L E
Sbjct: 524 IMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAF 583
Query: 241 NLSNKMA--LFGPSM 253
N+M LF P +
Sbjct: 584 QFHNEMIENLFKPDV 598
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 106/226 (46%), Gaps = 6/226 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G+ P+ +YN L+ YC+ +++A K++E M ++ P V +Y ++ G G+
Sbjct: 274 MKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGK 333
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDAS---GLMDEMVEKGLSPNATT 117
D+A + EM++ PD YN I + RD+S L++EM +KG+ NA T
Sbjct: 334 IDEAFRIRDEMEKMNVLPDVVTYNTLIDG---CSQWRDSSEVYSLIEEMDKKGVKCNAVT 390
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
YN+ + ++ + +M G P+ + L+ + K+ A ++ ++M
Sbjct: 391 YNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMT 450
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
KG + + LC KL EA ++G+ +VS+
Sbjct: 451 SKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSY 496
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 2/218 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G PD VSYN ++D K R +++A ++ M+ + +SP+ +Y ++ G +G
Sbjct: 239 MSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGL 298
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A V++ M P YN + +C ++ +A + DEM + + P+ TYN
Sbjct: 299 LKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNT 358
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
D ++L M G N + ++K +CK+ E L + M E
Sbjct: 359 LIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTL-DKMEEN 417
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHK 217
G + + L C GK+ +A + EM KG K
Sbjct: 418 GLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLK 455
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 108/264 (40%), Gaps = 38/264 (14%)
Query: 1 MREMGVKPDIVSYNCLIDV---YCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGL 57
M+ + +P++++ N L++ Y + A ++++ + P+ S+ +I G L
Sbjct: 166 MKRLNYRPNLLTCNTLMNSLVRYPSSSSILLARQVLKDSIKLGVVPNTNSFNILIYGYCL 225
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
+ A D + +M E+GC PD +YN + + L++A L+ +M KGLSPN T
Sbjct: 226 ESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMKSKGLSPNKHT 285
Query: 118 YNLF----------------FRVFYWSNDLRSSW------NLYC-------------RMM 142
YN+ + +N L + W N +C M
Sbjct: 286 YNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEME 345
Query: 143 GTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLV 202
LP+ + L+ C + L +M +KG + +++ +C G +
Sbjct: 346 KMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMT 405
Query: 203 EAEKSFLEMIEKGHKPSQVSFRRI 226
EA + +M E G P V++ +
Sbjct: 406 EATTTLDKMEENGLSPDCVTYNTL 429
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 56/111 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E KPD+ + N L+ C++ +EKA K+ + + DV++Y +II L G+
Sbjct: 589 MIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGK 648
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGL 111
+ A D+L EM+ PD Y I A R+++A +MVE G+
Sbjct: 649 FENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEAEEFTLKMVESGI 699
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 23/137 (16%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G D+V+YN +I CK+ + E AY ++ +M + + PD +Y II L G+ +A
Sbjct: 628 GKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEA 687
Query: 65 RDVLKEMKEYGCYPD-----------------------AAAYNAAIRNYCIAKRLRDASG 101
+ +M E G D + AY+ I C + +DA
Sbjct: 688 EEFTLKMVESGIVHDQNLKLGKGQNVLTSEVSEHFDFKSIAYSDQINELCNQHKYKDAMH 747
Query: 102 LMDEMVEKGLSPNATTY 118
L E+ ++G++ N TY
Sbjct: 748 LFVEVTKEGVALNKYTY 764
>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Vitis vinifera]
Length = 1045
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 112/242 (46%), Gaps = 19/242 (7%)
Query: 1 MREM---GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGL 57
+REM G PD +Y+ +I + C +V+ A+ + E+M+ + PDV +YT +I
Sbjct: 468 IREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCK 527
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
VG +AR EM GC P+ Y A I Y A+++ A+ L + M+ +G PN T
Sbjct: 528 VGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVT 587
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCL----------------PNTQSCMFLVKLCK 161
Y S + + +Y RM G + PN + LV
Sbjct: 588 YTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLC 647
Query: 162 RQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQV 221
+ KV+ A L + M +G +V D L D C +GKL EA+ F +M E+G+ P+
Sbjct: 648 KAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVY 707
Query: 222 SF 223
++
Sbjct: 708 TY 709
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 122/271 (45%), Gaps = 18/271 (6%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G P++V+Y LI Y K R++ A ++ E M E P+V++YT++I G GQ +KA
Sbjct: 545 GCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKA 604
Query: 65 RDVLKEMKEYGCYPDAA----------------AYNAAIRNYCIAKRLRDASGLMDEMVE 108
+ M+ PD Y A + C A ++++A L+D M
Sbjct: 605 CQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSV 664
Query: 109 KGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEI 168
+G PN Y+ F L + ++ +M G PN + L+ + +++++
Sbjct: 665 EGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDL 724
Query: 169 ALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKA 228
AL++ + M+E +++ + D LC +GK EA + M EKG P+ V++ +
Sbjct: 725 ALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMID 784
Query: 229 LMELANKQEALQNLSNKMALFG--PSMIPKR 257
A K + L +M G P+ + R
Sbjct: 785 GFGKAGKVDKCLELMRQMGAKGCAPNFVTYR 815
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 125/278 (44%), Gaps = 40/278 (14%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G P++ +Y+ LID KD++++ A K++ +M + +P+VI YT +I GL VG+
Sbjct: 697 MSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGK 756
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A ++ M+E GC+P+ Y A I + A ++ LM +M KG +PN TY +
Sbjct: 757 TDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRV 816
Query: 121 FF-------------------RVFYWSNDLRS--------------SWNLYCRMMGTGCL 147
+ YW + S L + +
Sbjct: 817 LINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLGLLDEIAENVAV 876
Query: 148 PNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCD----MGKLVE 203
P + L+ + ++E+AL+L +M SY L+ L + K+ +
Sbjct: 877 PIIPAYRILIDSFCKAGRLELALELHKEM--SSCTSYSAADKDLYSSLIESLSLASKVDK 934
Query: 204 AEKSFLEMIEKGHKPS-QVSFRRIKALMELANKQEALQ 240
A + + +MI++G P + F +K L+ + +EALQ
Sbjct: 935 AFELYADMIKRGGIPELSIFFYLVKGLIRINRWEEALQ 972
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 111/277 (40%), Gaps = 51/277 (18%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMR-DEDI---------------SPD 44
M G P++V+Y LID +CK Q+EKA +I +MR + DI P+
Sbjct: 576 MLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPN 635
Query: 45 VISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMD 104
+ +Y +++ GL + +ARD+L M GC P+ Y+A I +C +L +A +
Sbjct: 636 IFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFT 695
Query: 105 EMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGT-------------------- 144
+M E+G PN TY+ + L + + RM+
Sbjct: 696 KMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVG 755
Query: 145 ---------------GCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSD 189
GC PN + ++ + KV+ L+L M KG +
Sbjct: 756 KTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYR 815
Query: 190 VLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
VL + C G L +A + EM + +R++
Sbjct: 816 VLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKV 852
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 107/268 (39%), Gaps = 8/268 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR P++V+Y L+ + RQ+ + +I+ M E P + S+I G
Sbjct: 325 MRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGD 384
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRD------ASGLMDEMVEKGLSPN 114
A +LK+M + GC P YN I C ++L A EM++ + N
Sbjct: 385 YSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLN 444
Query: 115 ATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWN 174
+ R + ++++ MM G +P+T + ++ L KV+ A L+
Sbjct: 445 KVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFE 504
Query: 175 DMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELAN 234
+M + +L D C +G L +A K F EM+ G P+ V++ + A
Sbjct: 505 EMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKAR 564
Query: 235 KQEALQNLSNKMALFGPSMIPKREEYLA 262
K + L M IP Y A
Sbjct: 565 KMSSANELFEMM--LSEGCIPNVVTYTA 590
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 99/217 (45%), Gaps = 6/217 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQV------EKAYKIVEKMRDEDISPDVISYTSIIGG 54
M + G +P V YN LI C + ++ E A K +M D + + ++ +++
Sbjct: 395 MGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARC 454
Query: 55 LGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPN 114
L G+ +KA +++EM G PD + Y+ I C A ++ +A L +EM + P+
Sbjct: 455 LCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPD 514
Query: 115 ATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWN 174
TY + F L+ + + M+ GC PN + L+ + K+ A +L+
Sbjct: 515 VFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFE 574
Query: 175 DMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEM 211
M+ +G ++ L D C G++ +A + + M
Sbjct: 575 MMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARM 611
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 98/258 (37%), Gaps = 77/258 (29%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E P+++ Y +ID CK + ++AY+++ M ++ P+V++YT++I G G G+
Sbjct: 732 MLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGK 791
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDAS-------------------- 100
DK +++++M GC P+ Y I + C A L DA
Sbjct: 792 VDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRK 851
Query: 101 -------------GLMDEMVEKGLSPNATTYNLFFRVFYWSN------------------ 129
GL+DE+ E P Y + F +
Sbjct: 852 VIEGFNREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSY 911
Query: 130 -----DLRSS--------------WNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIAL 170
DL SS + LY M+ G +P +LVK R + E AL
Sbjct: 912 SAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRWEEAL 971
Query: 171 QLWN-------DMVEKGF 181
QL + D V +GF
Sbjct: 972 QLSDCICQMMVDFVREGF 989
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 106/244 (43%), Gaps = 15/244 (6%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G D + C + + CK + +A ++EK E+ D + YT +I GL
Sbjct: 258 MSDSGFNMDGYTLGCFVHLLCKAGRWREALALIEK---EEFKLDTVIYTQMISGLCEASL 314
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKR-LRDASGLMDEMVEKGLSPNATTYN 119
++A D L M+ C P+ Y + C+ KR L ++ M+ +G P+ +N
Sbjct: 315 FEEAMDFLSRMRSSSCIPNVVTYRILLCG-CLRKRQLGRCKRILSMMITEGCYPSRRIFN 373
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ S D ++ L +M GC P L+ EK+ L ++ EK
Sbjct: 374 SLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVL--ELAEK 431
Query: 180 GFG----SYILVSDV----LFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALME 231
+G ++++++ V L LC GK +A EM+ KG P ++ ++ L+
Sbjct: 432 AYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLC 491
Query: 232 LANK 235
A+K
Sbjct: 492 NASK 495
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 41/210 (19%), Positives = 85/210 (40%), Gaps = 3/210 (1%)
Query: 14 NCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKE 73
N LI C++ A + + +++D P ++Y +++ + D A V +EM +
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSD 260
Query: 74 YGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRS 133
G D + C A R R+A L++ ++ + Y ++
Sbjct: 261 SGFNMDGYTLGCFVHLLCKAGRWREALALIE---KEEFKLDTVIYTQMISGLCEASLFEE 317
Query: 134 SWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFD 193
+ + RM + C+PN + L+ C R+ ++ ++ + M+ +G + + L
Sbjct: 318 AMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIH 377
Query: 194 LLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
C G A K +M + G +P V +
Sbjct: 378 AYCRSGDYSYAYKLLKKMGDCGCQPGYVVY 407
>gi|302792250|ref|XP_002977891.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
gi|300154594|gb|EFJ21229.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
Length = 385
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 116/238 (48%), Gaps = 4/238 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PDI +Y LI +CK ++ + A ++ E++ PDV++Y+ +I GL G+ +A
Sbjct: 84 GCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEA 143
Query: 65 RDVLKEMKEYG-CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
D+ M + G C P+ YN+ I +C ++ +A L++ M E G SP+ TY
Sbjct: 144 IDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMN 203
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
F L +++L +M G PN + L+ R+ ++ A+ + +M K
Sbjct: 204 GFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSP 263
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEALQ 240
+ + + D C + +L EA K LE E P+ VSF I+ L ++ EA++
Sbjct: 264 TVYTYNTILDGYCRVNQLEEARKFMLE--EMDCPPNVVSFNIMIRGLCKVNRSSEAME 319
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 111/218 (50%), Gaps = 5/218 (2%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P+ V+YN LI +C+ ++++A ++E+M + SPDV++YT+++ G + + D A D+
Sbjct: 158 PNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDL 217
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L +M G P+ + + + C RL DA ++ EM K SP TYN +
Sbjct: 218 LNQMTRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCR 277
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYIL 186
N L + M C PN S +++ LCK E A++L + + ++
Sbjct: 278 VNQLEEARKFMLEEM--DCPPNVVSFNIMIRGLCKVNRSSE-AMELVEEARRRRCNPDVV 334
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEK-GHKPSQVSF 223
+ + D+LC K+ EA + + +M+E+ G P+ +++
Sbjct: 335 MYTTVIDVLCREKKVDEACRVYRKMLEEPGCLPNSITY 372
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 99/220 (45%), Gaps = 1/220 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P V+YN LI CK + +AY ++E+M PD+ +YT++I G + D A V
Sbjct: 52 PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 111
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKG-LSPNATTYNLFFRVFY 126
+++ G PD Y+ I C RL++A L M++ G PN TYN F
Sbjct: 112 FEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFC 171
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+ + NL RM TG P+ + L+ + +++ A L N M KG ++
Sbjct: 172 RMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVV 231
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
L D LC +L +A EM K P+ ++ I
Sbjct: 232 TFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTI 271
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 95/189 (50%), Gaps = 1/189 (0%)
Query: 36 MRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKR 95
++D + P ++Y S+I GL + +A D+L+EM GC PD Y I +C +K+
Sbjct: 45 VQDAEEVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKK 104
Query: 96 LRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG-CLPNTQSCM 154
DA + +++V +G P+ TY+ L+ + +L+ RM+ +G C+PNT +
Sbjct: 105 SDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYN 164
Query: 155 FLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEK 214
L+ R K++ A+ L M E G ++ L + C + +L +A +M K
Sbjct: 165 SLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRK 224
Query: 215 GHKPSQVSF 223
G P+ V+F
Sbjct: 225 GLTPNVVTF 233
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 90/179 (50%), Gaps = 2/179 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G PD+V+Y L++ +CK +++ AY ++ +M + ++P+V+++TS++ GL +
Sbjct: 186 MAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCRENR 245
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +L EM+ C P YN + YC +L +A M E E PN ++N+
Sbjct: 246 LSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFMLE--EMDCPPNVVSFNI 303
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
R N + L C P+ ++ + R++KV+ A +++ M+E+
Sbjct: 304 MIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKVDEACRVYRKMLEE 362
>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
Length = 582
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 121/245 (49%), Gaps = 6/245 (2%)
Query: 1 MREMG---VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGL 57
+REMG V PDIVSYN LI+ CK +++++A ++ +M P+ ++ T+++ GL
Sbjct: 21 IREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCK 80
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
G+ D+A ++L+ MK+ G D Y I +C L L DEM+ KG+S N T
Sbjct: 81 DGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVT 140
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDM 176
Y+ + + + M G P+ + L+ LCK A+ L N M
Sbjct: 141 YSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATH-AMDLLNLM 199
Query: 177 VEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI-KALMELANK 235
VEKG + +VL LC G +++A K MIEKG K V++ + K L +
Sbjct: 200 VEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKV 259
Query: 236 QEALQ 240
EAL+
Sbjct: 260 DEALK 264
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 119/244 (48%), Gaps = 12/244 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G D+V Y LI +C + +++ ++ ++M + IS +V++Y+ ++ GL +GQ
Sbjct: 94 MKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQ 153
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A VL M E+G +PD Y I C R A L++ MVEKG P+ TYN+
Sbjct: 154 WKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNV 213
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV--E 178
+ ++ + M+ G + + L+K + KV+ AL+L+N M E
Sbjct: 214 LLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNE 273
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR----------RIKA 228
+ ++L LC G+L +A K +M++KG + V++ +IK
Sbjct: 274 NCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKE 333
Query: 229 LMEL 232
MEL
Sbjct: 334 AMEL 337
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 104/230 (45%), Gaps = 2/230 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+ PD+V+Y LID CKD + A ++ M ++ P ++Y ++ GL G
Sbjct: 164 MAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGL 223
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMV--EKGLSPNATTY 118
A +L+ M E G D YN ++ C ++ +A L + M E L PN T+
Sbjct: 224 VIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTF 283
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
N+ L + ++ +M+ G N + L+ C + K++ A++LW +++
Sbjct: 284 NMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLD 343
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKA 228
GF +L D C M L A+ F EM G P+ + + A
Sbjct: 344 LGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMA 393
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 103/213 (48%), Gaps = 4/213 (1%)
Query: 14 NCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKE 73
N ++ C++ V +A ++ +M + +SPD++SY ++I GL + +A +L EM+
Sbjct: 2 NIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEA 61
Query: 74 YGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRS 133
GC+P++ + C R+ +A L++ M +KG + Y F + +L
Sbjct: 62 AGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDR 121
Query: 134 SWNLYCRMMGTGCLPN--TQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVL 191
L+ M+G G N T SC+ + LC+ + E A + N M E G ++ L
Sbjct: 122 GKELFDEMLGKGISANVVTYSCL-VHGLCRLGQWKE-ANTVLNAMAEHGIHPDVVTYTGL 179
Query: 192 FDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
D LC G+ A M+EKG +PS V++
Sbjct: 180 IDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYN 212
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 112/248 (45%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
++P++ ++N LI CK+ ++ KA KI KM + ++++Y ++GG G+ +A
Sbjct: 276 LEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAM 335
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
++ K++ + G P++ Y+ I +C + L A GL EM GL+P YN
Sbjct: 336 ELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASL 395
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
L + +L+ M C P+ S ++ + + +L MVE G
Sbjct: 396 CKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDA 455
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNK 245
L L + L +G+L EA+ + M+ G P + + + + + NL ++
Sbjct: 456 LTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQ 515
Query: 246 MALFGPSM 253
MA G +
Sbjct: 516 MAAKGTVL 523
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 79/169 (46%), Gaps = 1/169 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G+ P + YN L+ CK+ +E+A + ++M + + PD+IS+ ++I G G
Sbjct: 376 MRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGD 435
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+++ +M E G PDA ++ I L +A ++ MV G +P+A Y+
Sbjct: 436 FQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDS 495
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQ-SCMFLVKLCKRQEKVEI 168
+ D NL +M G + + + L LC ++V++
Sbjct: 496 LLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDV 544
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 86/179 (48%), Gaps = 2/179 (1%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
++G P+ +Y+ LID +CK R + A + +MR ++P + Y +++ L G +
Sbjct: 343 DLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLE 402
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
+A+ + +EM C PD ++N I A + L +MVE GL P+A T++
Sbjct: 403 QAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLI 462
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKG 180
+L + + RM+ +G P+ L+K L + + EI + L + M KG
Sbjct: 463 NRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEI-INLLHQMAAKG 520
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 90/215 (41%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G ++V+YN L+ K ++++A ++ +++ D P+ +Y+ +I G +
Sbjct: 306 MVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRM 365
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A+ + EM+ +G P YN + + C L A L EM P+ ++N
Sbjct: 366 LNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNT 425
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ D + L +M+ G P+ + L+ + +++ A MV G
Sbjct: 426 MIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASG 485
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
F LV D L L G E +M KG
Sbjct: 486 FTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKG 520
>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
Length = 568
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 106/219 (48%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ D+ +YN LI+ +CK+ V+KA +I E M + V++YTS+I L GQ +
Sbjct: 322 GLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQET 381
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ E G PD YNA I ++ + + A +M EM +K ++P+ TYN R
Sbjct: 382 DKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRG 441
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + L M G P+ + L+ + V+ AL++ N+M+ KGF
Sbjct: 442 LCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPT 501
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+L + L LC G+ +AE EM+E G P ++
Sbjct: 502 LLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTY 540
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 113/225 (50%), Gaps = 3/225 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDE-DISPDVISYTSIIGGLGLVG 59
+R+M +P+ V+YN +I +C +V+ A I+ +MR+ I+P+ +Y ++I G VG
Sbjct: 177 LRQMP-RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVG 235
Query: 60 QPDKARDVLKEMKEYG-CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
+ D+A V EM G P+A YNA I YC +L A D MVE+G++ TY
Sbjct: 236 RVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATY 295
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
NL + ++ L M G G + + L+ ++ V+ AL+++ +M
Sbjct: 296 NLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSR 355
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+G + ++ L L G++ E +K F E + +G +P V +
Sbjct: 356 RGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLY 400
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 88/154 (57%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G++PD+V YN LI+ + +++A++I+ +M + I+PD ++Y +++ GL L+G+ D+A
Sbjct: 392 GIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEA 451
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
R ++ EM + G PD YN I Y + ++DA + +EM+ KG +P TYN +
Sbjct: 452 RKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQG 511
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK 158
+ + N+ M+ G P+ + + L++
Sbjct: 512 LCKNGQGDDAENMVKEMVENGITPDDSTYISLIE 545
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 108/228 (47%), Gaps = 5/228 (2%)
Query: 1 MREM----GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDE-DISPDVISYTSIIGGL 55
MREM G+ P+ +Y +I +CK +V++A K+ ++M + ++ P+ + Y ++IGG
Sbjct: 208 MREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGY 267
Query: 56 GLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNA 115
G+ D A M E G A YN + + R +A L++EM KGL+ +
Sbjct: 268 CDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDV 327
Query: 116 TTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWND 175
TYN+ +++ + ++ M G + L+ ++ +V+ +L+++
Sbjct: 328 FTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDE 387
Query: 176 MVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
V +G +++ + L + G + A + EM +K P V++
Sbjct: 388 AVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTY 435
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 53/87 (60%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G++PD+V+YN LI Y V+ A +I +M ++ +P +++Y ++I GL GQ
Sbjct: 458 MTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQ 517
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAI 87
D A +++KEM E G PD + Y + I
Sbjct: 518 GDDAENMVKEMVENGITPDDSTYISLI 544
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 77/160 (48%), Gaps = 8/160 (5%)
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEK-GLSPNATT 117
G+P +A ++L++M P+A YN I +C R++ A +M EM E+ G++PN T
Sbjct: 168 GKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYT 223
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMF--LVKLCKRQEKVEIALQLWND 175
Y + + + ++ M+ G + ++ M+ L+ Q K++ AL +
Sbjct: 224 YGTVISGWCKVGRVDEAVKVFDEMLTKGEV-KPEAVMYNALIGGYCDQGKLDTALLYRDR 282
Query: 176 MVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
MVE+G + ++L L G+ EA + EM KG
Sbjct: 283 MVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKG 322
Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 33/55 (60%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGL 55
M G P +++YN LI CK+ Q + A +V++M + I+PD +Y S+I GL
Sbjct: 493 MMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 547
>gi|15239874|ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g12100, mitochondrial; Flags: Precursor
gi|9759377|dbj|BAB10028.1| unnamed protein product [Arabidopsis thaliana]
gi|28973713|gb|AAO64173.1| unknown protein [Arabidopsis thaliana]
gi|29824237|gb|AAP04079.1| unknown protein [Arabidopsis thaliana]
gi|110737169|dbj|BAF00534.1| hypothetical protein [Arabidopsis thaliana]
gi|332004380|gb|AED91763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 816
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 109/226 (48%), Gaps = 35/226 (15%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+KPD ++YNCLI +C+ ++E A K V KM+ + +SP V +Y +IGG G +
Sbjct: 415 MEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYE 474
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DK D+LKEM++ G P+ +Y I C +L +A + +M ++G+SP YN+
Sbjct: 475 FDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNM 534
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
L+ C + K+E A + +M++KG
Sbjct: 535 -----------------------------------LIDGCCSKGKIEDAFRFSKEMLKKG 559
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ + L D L GKL EAE LE+ KG KP ++ +
Sbjct: 560 IELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSL 605
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 125/264 (47%), Gaps = 10/264 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ + P + YN LID CK +++ A ++ ++M + P +I+Y ++I G G
Sbjct: 205 MKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGN 264
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
P+K+ V + MK P +N ++ A + DA ++ EM + G P+A T+++
Sbjct: 265 PEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSI 324
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + + ++ +Y + +G N +C L+ ++ K+E A ++ + KG
Sbjct: 325 LFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKG 384
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF----RRIKALMELANKQ 236
++ + + D C G LV A M ++G KP +++ RR L E+ N +
Sbjct: 385 LVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAE 444
Query: 237 EALQNLSNKMALFGPSMIPKREEY 260
+ + NKM L G S P E Y
Sbjct: 445 KEV----NKMKLKGVS--PSVETY 462
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 123/239 (51%), Gaps = 2/239 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GVK + + + L++ CK+ ++EKA +I+ + + + P+ + Y ++I G G A
Sbjct: 349 GVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGA 408
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
R ++ M++ G PD AYN IR +C + +A +++M KG+SP+ TYN+
Sbjct: 409 RMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGG 468
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGS 183
+ + +++ M G +PN S L+ LCK + +E + + DM ++G
Sbjct: 469 YGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQI-VKRDMEDRGVSP 527
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNL 242
+ + ++L D C GK+ +A + EM++KG + + V++ + + + K ++L
Sbjct: 528 KVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDL 586
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 107/254 (42%), Gaps = 41/254 (16%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P +++YN LID YCK EK++K+ E+M+ + I P +I++ +++ GL G + A +V
Sbjct: 247 PSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENV 306
Query: 68 LKEMKEYGCYPDAAAYNAAIRNY-----------------------------------CI 92
LKEMK+ G PDA ++ Y C
Sbjct: 307 LKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCK 366
Query: 93 AKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS 152
++ A ++ + KGL PN YN + DL + M G P+ +
Sbjct: 367 EGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLA 426
Query: 153 CMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSF---L 209
L++ ++E A + N M KG + ++ L+ G+ E +K F
Sbjct: 427 YNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNI---LIGGYGRKYEFDKCFDILK 483
Query: 210 EMIEKGHKPSQVSF 223
EM + G P+ VS+
Sbjct: 484 EMEDNGTMPNVVSY 497
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 98/218 (44%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+++G PD +++ L D Y + + E A + E D + + + + ++ L G+
Sbjct: 310 MKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGK 369
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA ++L G P+ YN I YC L A ++ M ++G+ P+ YN
Sbjct: 370 IEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNC 429
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
R F ++ ++ +M G P+ ++ L+ R+ + + + +M + G
Sbjct: 430 LIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNG 489
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
++ L + LC KL+EA+ +M ++G P
Sbjct: 490 TMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSP 527
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 89/221 (40%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E +P Y I K V K ++ +M+ + I P V Y +I GL + +
Sbjct: 172 ESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMN 231
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
A + EM P YN I YC A + + + M + P+ T+N
Sbjct: 232 DAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLL 291
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
+ + + + + N+ M G +P+ + L EK E AL ++ V+ G
Sbjct: 292 KGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVK 351
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+L + LC GK+ +AE+ + KG P++V +
Sbjct: 352 MNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIY 392
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 57/109 (52%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
EM +KPD++ YN ++ Y +EKA+ + ++M ++ I D +Y S+I G VG+
Sbjct: 658 EMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLC 717
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGL 111
+ R ++ EM P+A YN ++ +C K A EM EKG
Sbjct: 718 EVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGF 766
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 77/173 (44%), Gaps = 13/173 (7%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G+KP + +Y+ LI + C +E ++ +M + PD++ Y ++ + G
Sbjct: 625 MKRSGIKPTLKTYHLLISL-CTKEGIELTERLFGEM---SLKPDLLVYNGVLHCYAVHGD 680
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA ++ K+M E D YN+ I +L + L+DEM + + P A TYN+
Sbjct: 681 MEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNI 740
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLW 173
+ D S++ Y M G FL+ +C E V + W
Sbjct: 741 IVKGHCEVKDYMSAYVWYREMQEKG---------FLLDVCIGNELVSGLKEEW 784
Score = 40.4 bits (93), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 26/134 (19%), Positives = 62/134 (46%)
Query: 93 AKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS 152
+K + +A+ L + +G+ P++ + L + R + N++ ++ + P+
Sbjct: 122 SKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFM 181
Query: 153 CMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMI 212
++ + V L+L+N M + + +VL D LC ++ +AE+ F EM+
Sbjct: 182 YGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEML 241
Query: 213 EKGHKPSQVSFRRI 226
+ PS +++ +
Sbjct: 242 ARRLLPSLITYNTL 255
>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 652
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 107/212 (50%), Gaps = 2/212 (0%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+KPD+ ++N L++ +CKD ++++ + + M + I P+ ++Y S++ G LV + +KA+
Sbjct: 291 IKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAK 350
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+ M + G PD +Y+ I +C K+ +A L EM K + P+ TY+
Sbjct: 351 SIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGL 410
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSC-MFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
S + + L +M G P ++ L LCK + V+ A+ L + +KG
Sbjct: 411 SKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQ-VDKAIALLTKLKDKGIQPN 469
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGH 216
+ +L LC GKL +A K F ++ KGH
Sbjct: 470 MYTYSILIKGLCQSGKLEDARKVFEGLLVKGH 501
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 124/239 (51%), Gaps = 1/239 (0%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
V+P++V YN +ID CK + V +A+ + +M + ISPDV++Y+++I G ++G+ + A
Sbjct: 221 VQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAI 280
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
D+ +M PD +N + +C ++++ + D M+++G+ PN TYN +
Sbjct: 281 DLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGY 340
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
++ + +++ M G P+ QS ++ + +K + A+ L+ +M K +
Sbjct: 341 CLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDV 400
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI-KALMELANKQEALQNLS 243
+ L D L G++ A + +M ++G P+ ++ I AL ++ +A+ L+
Sbjct: 401 VTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLT 459
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 115/239 (48%), Gaps = 1/239 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ PD+V+Y+ LI +C ++ A + KM E+I PDV ++ ++ G+
Sbjct: 251 MISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGK 310
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ + V M + G P+ YN+ + YC+ K + A + + M + G++P+ +Y++
Sbjct: 311 MKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSI 370
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + NL+ M +P+ + L+ + ++ ALQL + M ++G
Sbjct: 371 MINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRG 430
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEA 238
I + + D LC + ++ +A ++ +KG +P+ ++ IK L + ++A
Sbjct: 431 VPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDA 489
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 112/237 (47%), Gaps = 2/237 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+KP+ V+YN L+D YC ++V KA I M ++PD+ SY+ +I G + +
Sbjct: 321 MMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKK 380
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A ++ KEM PD Y++ I + R+ A L+D+M ++G+ P TYN
Sbjct: 381 FDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNS 440
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + L ++ G PN + L+K + K+E A +++ ++ KG
Sbjct: 441 ILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKG 500
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQE 237
+ ++ C G EA +M + G P ++ I ++ L K E
Sbjct: 501 HNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEII--ILSLFKKDE 555
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 106/221 (47%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
+MG PD +++ LI C Q+++A+ +K+ D ISY ++I GL VG+
Sbjct: 148 KMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETR 207
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
A D+L+ + P+ YN I + C K + +A L EM+ KG+SP+ TY+
Sbjct: 208 AALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALI 267
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
F L + +L+ +M+ P+ + LV + K++ +++ M+++G
Sbjct: 268 SGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIK 327
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + L D C + ++ +A+ F M + G P S+
Sbjct: 328 PNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSY 368
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 114/250 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+KP++V+ N LI+ +C+ + A+ + K+ PD I++T++I GL L GQ
Sbjct: 111 MEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQ 170
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++ G + D +Y I C R A L+ + + PN YN
Sbjct: 171 IQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNT 230
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ +++L+ M+ G P+ + L+ K+ A+ L+N M+ +
Sbjct: 231 IIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILEN 290
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ ++L + C GK+ E + F M+++G KP+ V++ + L + +
Sbjct: 291 IKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAK 350
Query: 241 NLSNKMALFG 250
++ N MA G
Sbjct: 351 SIFNTMAQGG 360
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/217 (20%), Positives = 90/217 (41%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P +N ++ K + + +KM I P++++ +I +G A V
Sbjct: 83 PPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSV 142
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
++ + G PD + I+ C+ +++ A D++V G + +Y
Sbjct: 143 FAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCK 202
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ R++ +L R+ G PN ++ + + V A L+++M+ KG ++
Sbjct: 203 VGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVT 262
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
L C +GKL +A F +MI + KP +F
Sbjct: 263 YSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFN 299
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 46/240 (19%), Positives = 91/240 (37%), Gaps = 35/240 (14%)
Query: 44 DVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLM 103
+ ISY+S D A + + P A +N + + +K L
Sbjct: 49 NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLS 108
Query: 104 DEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQ 163
+M +G+ PN N+ F + +++++ +++ G +P+T + L+K +
Sbjct: 109 QKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLK 168
Query: 164 EKVEIALQLWNDMVEKGFG----SY-------------------------------ILVS 188
+++ A + +V GF SY +++
Sbjct: 169 GQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMY 228
Query: 189 DVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMAL 248
+ + D +C + + EA F EMI KG P V++ + + + K +L NKM L
Sbjct: 229 NTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMIL 288
>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
Length = 814
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 114/224 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ PD V+Y+ ++ CK R ++KA + +M ++ + P+ +Y ++I G GQ
Sbjct: 245 MVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQ 304
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A V KEM+ PD +N + + C ++++A + D M KG +P+ +YN+
Sbjct: 305 WKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNI 364
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L +L+ M+G G P + L+K ++ A+ ++N+M + G
Sbjct: 365 MLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHG 424
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
+L + LC +GK+ +A + F +MI++G P + ++
Sbjct: 425 VKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYH 468
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 109/215 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ GVKP++++Y +I C+ +++ A + +M D+ ++PD +Y +I G G
Sbjct: 420 MRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGS 479
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA++++ E+ G + D +++ I N C R+ DA + D V GL P A Y++
Sbjct: 480 LLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSM 539
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + ++ M+ G PN LV + +++ L L+ +M++KG
Sbjct: 540 LMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKG 599
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
++ +++ D L + G+ V A+ F EM E G
Sbjct: 600 IKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESG 634
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 110/229 (48%), Gaps = 3/229 (1%)
Query: 1 MREM---GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGL 57
+R+M GV P+ +YN LI Y Q ++A ++ ++MR + I PDV+++ ++G L
Sbjct: 277 LRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCK 336
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
G+ +ARDV M G PD +YN + Y L D + L D M+ G++P T
Sbjct: 337 YGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICT 396
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
+N+ + + L + ++ M G PN + ++ R K++ A++ +N M+
Sbjct: 397 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMI 456
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++G L C G L++A++ E++ G V F I
Sbjct: 457 DQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSI 505
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 106/224 (47%), Gaps = 4/224 (1%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDI--SPDVISYTSIIGGLGLVGQ 60
E+G PD+ SY+ L+ C + +A ++ M + SPDV++Y ++I G G
Sbjct: 175 ELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGD 234
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA D+ KEM + G PD Y++ + C A+ + A + +MV KG+ PN TYN
Sbjct: 235 VNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNN 294
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSC-MFLVKLCKRQEKVEIALQLWNDMVEK 179
+ + + + ++ M LP+ + M + LCK K++ A +++ M K
Sbjct: 295 LIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCK-YGKIKEARDVFDTMAMK 353
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G + +++ + G LV+ F M+ G P +F
Sbjct: 354 GQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTF 397
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 106/222 (47%), Gaps = 3/222 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKI-VEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
G++ DI+ N L+ +C+ ++ ++A I + + + PDV SY+ ++ L G+ +
Sbjct: 141 GLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQ 200
Query: 64 ARDVLKEMKEYG--CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
A D+L+ M E G C PD AYN I + + A L EMV++G+ P+ TY+
Sbjct: 201 ADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSV 260
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
+ + + +M+ G LPN + L+ + + A++++ +M +
Sbjct: 261 VHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSI 320
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ ++L LC GK+ EA F M KG P S+
Sbjct: 321 LPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSY 362
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 110/237 (46%), Gaps = 1/237 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD+V+YN +ID + K+ V KA + ++M I PD ++Y+S++ L DKA
Sbjct: 217 PDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAF 276
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L++M G P+ YN I Y + ++A + EM + + P+ T+N+
Sbjct: 277 LRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCK 336
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
++ + +++ M G P+ S ++ + + L++ M+ G I
Sbjct: 337 YGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICT 396
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLS 243
+VL + G L +A F EM + G KP+ +++ I AL + +A++ +
Sbjct: 397 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFN 453
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 102/237 (43%), Gaps = 2/237 (0%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
+G+ P V Y+ L+D YC ++EKA ++ + M I P+ + Y +++ G +G+ D+
Sbjct: 528 VGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDE 587
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
+ +EM + G P YN I A R A EM E G++ N TY++ R
Sbjct: 588 GLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLR 647
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
+ + + L+ + + + ++ + +VE A L+ + G
Sbjct: 648 GLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVP 707
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
++ ++ L G + EAE F M G +P + + EL K E ++
Sbjct: 708 CVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHV--VRELLKKNEIVR 762
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 92/235 (39%), Gaps = 37/235 (15%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G++P+ V Y L++ YCK ++++ + +M + I P I Y II GL G+
Sbjct: 560 MVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGR 619
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIR----NYCI------------------------ 92
A+ EM E G + Y+ +R N C
Sbjct: 620 TVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNT 679
Query: 93 -------AKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
+R+ +A L + GL P TY++ + + +++ M G
Sbjct: 680 MIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAG 739
Query: 146 CLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMG 199
C P+++ +V+ L K+ E V L + + E+ F L + +L DL G
Sbjct: 740 CEPDSRLLNHVVRELLKKNEIVRAGAYL-SKIDERNFSLEHLTTMLLVDLFSSKG 793
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 102/248 (41%), Gaps = 3/248 (1%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ P +Y L+D + + E A ++ + D+I ++ G + D+A
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEAL 166
Query: 66 DV-LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGL--SPNATTYNLFF 122
D+ L E GC PD +Y+ +++ C + A L+ M E G SP+ YN
Sbjct: 167 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVI 226
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
F+ D+ + +L+ M+ G P+ + +V + ++ A MV KG
Sbjct: 227 DGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL 286
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNL 242
+ L G+ EA + F EM + P V+F + + K + +++
Sbjct: 287 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDV 346
Query: 243 SNKMALFG 250
+ MA+ G
Sbjct: 347 FDTMAMKG 354
>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 108/226 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GVKPD+V+YN +ID CK R ++KA ++ +M PD ++Y +I G +G+
Sbjct: 291 MTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGR 350
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + ++MK G P+ N+ + + C R ++A+ + D M KG P+ +Y
Sbjct: 351 LKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCT 410
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L+ M G + + L+ ++ V+ A+ ++ +M ++G
Sbjct: 411 LLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQG 470
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ + MG+L +A + F +M+ +G +P+ + I
Sbjct: 471 VSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSI 516
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 107/241 (44%), Gaps = 1/241 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P++V+YN +I + K+ + KA + +M + + PDV++Y II L DKA V
Sbjct: 263 PNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELV 322
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L++M G PD YN I Y RL++A+ + +M +GL PN N F
Sbjct: 323 LRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCK 382
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ + ++ M G P+ S L+ + + L+N M G + V
Sbjct: 383 HGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRV 442
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLSNKM 246
++L G + +A F EM ++G P V++ I A + +A++ + +
Sbjct: 443 FNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMV 502
Query: 247 A 247
A
Sbjct: 503 A 503
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 101/227 (44%), Gaps = 1/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G +PD V+YNC+I Y ++++A K+ KM+ + P+++ S + L G+
Sbjct: 326 MTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGR 385
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++ M G PD +Y + Y D GL + M G++ + +N+
Sbjct: 386 SKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNI 445
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + ++ M G P+ + ++ R ++ A++ +N MV +G
Sbjct: 446 LIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARG 505
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG-HKPSQVSFRRI 226
V + C G LV+A++ EMI KG +P V F +
Sbjct: 506 IQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSV 552
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 103/218 (47%), Gaps = 2/218 (0%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
+PDIV +N +I+ CKD +V A+ I + + D PDVI++TS+I G LVG+ DKA
Sbjct: 543 RPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFK 602
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
+L M+ G D Y+ + Y R+ D L EM KG+ PN TY + +
Sbjct: 603 ILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLF 662
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQ-SCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ ++ + M+ +G + L LC R + A+ L+ + I
Sbjct: 663 RAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLC-RNNCADEAIILFQKLGTMNVKFSI 721
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + + + + + + EA++ F + G P++ ++
Sbjct: 722 TILNTMINAMYKVQRKEEAKELFATISASGLLPNESTY 759
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 105/224 (46%), Gaps = 1/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G+ D +N LI Y K V+ A I +M+ + +SPDV++Y+++I +G+
Sbjct: 431 MKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGR 490
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLS-PNATTYN 119
A + +M G P+ A Y++ I+ +C+ L A L+ EM+ KG+ P+ +N
Sbjct: 491 LTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFN 550
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ + +++ + G P+ + L+ K++ A ++ + M
Sbjct: 551 SVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVV 610
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G + I+ L D G++ + F EM KG KP+ V++
Sbjct: 611 GVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTY 654
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 62/120 (51%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
++G +PD++++ LID YC +++KA+KI++ M + D+++Y++++ G G+ +
Sbjct: 574 DIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRIN 633
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
+ +EM+ G P+ Y + A R A EM+E G + + Y +
Sbjct: 634 DGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIIL 693
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 107/247 (43%), Gaps = 16/247 (6%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +GV+ DIV+Y+ L+D Y K+ ++ + +M+ + + P+ ++Y ++ GL G+
Sbjct: 607 MEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGR 666
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
AR EM E G + Y + C +A L ++ + + T N
Sbjct: 667 TVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNT 726
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
Y + L+ + +G LPN + ++ + VE A +++ M + G
Sbjct: 727 MINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSG 786
Query: 181 F--GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEA 238
GS +L + + +L + G++ +A G+ S+V +RI L+E +
Sbjct: 787 IVPGSRLL--NRIIRMLLEKGEIAKA----------GNYLSKVDGKRI--LLEASTTSLM 832
Query: 239 LQNLSNK 245
L S K
Sbjct: 833 LSLFSRK 839
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 90/220 (40%), Gaps = 38/220 (17%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIV-EKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
G+K ++ + L+ C + E+A ++ +M + P+V SY+ I+ GL +
Sbjct: 187 GLKIHQITASTLLKCLCYANRTEEAVNVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQR 246
Query: 64 ARDVLKEMKEYG--CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
A D+ + M + G C P+ AYN I + A L EM +G+ P+ TYNL
Sbjct: 247 ALDLFQMMAKEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLI 306
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
+ + + + +M G P+T + +N M+ G+
Sbjct: 307 IDALCKARAMDKAELVLRQMTTNGAQPDTVT--------------------YNCMIH-GY 345
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQV 221
+ +G+L EA K F +M +G P+ V
Sbjct: 346 AT--------------LGRLKEAAKMFRKMKSRGLIPNIV 371
>gi|299471515|emb|CBN80001.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 687
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 101/223 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ P+ +SYN +D K Q EKA K++ M PD+IS+ S I G Q
Sbjct: 383 MPAQGIAPNTISYNSALDACAKGGQWEKAVKLLRGMSTVGSDPDIISFNSAIDACGRGQQ 442
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A ++L+EM G P+ YN+AI + R ++A GL EM +GLSPN TYN
Sbjct: 443 WETAVELLREMPTAGLTPNVITYNSAIEACGRSARWQEAMGLFREMPTRGLSPNVVTYNS 502
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L M G P+ S ++ C + E+ E+ALQL M +G
Sbjct: 503 MIDACAKGEQWELAVQLLTGMPARGVAPDVISYNSAIEACGKGEQWELALQLLKGMPTRG 562
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I+ + G+ EA +M G P+ VS+
Sbjct: 563 PKPDIISYNSAVTACAKSGRWREALGLLKDMATVGLTPNTVSY 605
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 123/268 (45%), Gaps = 6/268 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G+ P ++SYN + + +A +++++M + I+P+ ISY S + GQ
Sbjct: 348 MTTVGLVPTVISYNSATAACAVNGRWVEALELLKEMPAQGIAPNTISYNSALDACAKGGQ 407
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA +L+ M G PD ++N+AI ++ A L+ EM GL+PN TYN
Sbjct: 408 WEKAVKLLRGMSTVGSDPDIISFNSAIDACGRGQQWETAVELLREMPTAGLTPNVITYNS 467
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
S + + L+ M G PN + ++ C + E+ E+A+QL M +G
Sbjct: 468 AIEACGRSARWQEAMGLFREMPTRGLSPNVVTYNSMIDACAKGEQWELAVQLLTGMPARG 527
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLE-MIEKGHKPSQVSFRR-IKALMELANKQEA 238
++ + + C G+ E L+ M +G KP +S+ + A + +EA
Sbjct: 528 VAPDVISYNSAIE-ACGKGEQWELALQLLKGMPTRGPKPDIISYNSAVTACAKSGRWREA 586
Query: 239 LQNLSNKMALFGPSMIPKREEYLAEMSA 266
L L MA G + P Y A + A
Sbjct: 587 L-GLLKDMATVG--LTPNTVSYGAAIHA 611
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 102/218 (46%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ D++SY+ +I + R+ ++A ++E+MR + +SP+VISY S I + +A
Sbjct: 283 IPADVISYSSVIAACGRGRRWKEAMDLLEQMRTQGVSPNVISYNSAIDACAKGDRWKEAL 342
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
D+L+EM G P +YN+A + R +A L+ EM +G++PN +YN
Sbjct: 343 DLLREMTTVGLVPTVISYNSATAACAVNGRWVEALELLKEMPAQGIAPNTISYNSALDAC 402
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ L M G P+ S + C R ++ E A++L +M G +
Sbjct: 403 AKGGQWEKAVKLLRGMSTVGSDPDIISFNSAIDACGRGQQWETAVELLREMPTAGLTPNV 462
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + + + EA F EM +G P+ V++
Sbjct: 463 ITYNSAIEACGRSARWQEAMGLFREMPTRGLSPNVVTY 500
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 106/233 (45%), Gaps = 5/233 (2%)
Query: 1 MREM---GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKM--RDEDISPDVISYTSIIGGL 55
+REM GV PD+V+YN I K + ++A ++ +M E I+PDV++Y S I
Sbjct: 133 LREMPTEGVTPDVVTYNSAIAACSKGGRWKEAMDLLTQMVAPTEGITPDVVTYNSAIAAC 192
Query: 56 GLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNA 115
G+ +A D+L++M G P+ YN+AI +R +A L++E++E+G P+
Sbjct: 193 SNGGRWKEAMDLLEQMVAQGVPPNLITYNSAIGACAKGRRWEEAMDLLEEVIEQGFPPST 252
Query: 116 TTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWND 175
TYN + +L +M+ + S ++ C R + + A+ L
Sbjct: 253 RTYNPVIDACAKGGRWLEAMDLLGQMLTNDIPADVISYSSVIAACGRGRRWKEAMDLLEQ 312
Query: 176 MVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKA 228
M +G ++ + D + EA EM G P+ +S+ A
Sbjct: 313 MRTQGVSPNVISYNSAIDACAKGDRWKEALDLLREMTTVGLVPTVISYNSATA 365
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 107/239 (44%), Gaps = 3/239 (1%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E G P +YN +ID K + +A ++ +M DI DVISY+S+I G +
Sbjct: 245 EQGFPPSTRTYNPVIDACAKGGRWLEAMDLLGQMLTNDIPADVISYSSVIAACGRGRRWK 304
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
+A D+L++M+ G P+ +YN+AI R ++A L+ EM GL P +YN
Sbjct: 305 EAMDLLEQMRTQGVSPNVISYNSAIDACAKGDRWKEALDLLREMTTVGLVPTVISYNSAT 364
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
+ + L M G PNT S + C + + E A++L M G
Sbjct: 365 AACAVNGRWVEALELLKEMPAQGIAPNTISYNSALDACAKGGQWEKAVKLLRGMSTVGSD 424
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFL-EMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
I+ + D C G+ E L EM G P+ +++ I+A A QEA+
Sbjct: 425 PDIISFNSAID-ACGRGQQWETAVELLREMPTAGLTPNVITYNSAIEACGRSARWQEAM 482
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 100/226 (44%), Gaps = 3/226 (1%)
Query: 1 MREM---GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGL 57
+REM G+ P++++YN I+ + + ++A + +M +SP+V++Y S+I
Sbjct: 450 LREMPTAGLTPNVITYNSAIEACGRSARWQEAMGLFREMPTRGLSPNVVTYNSMIDACAK 509
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
Q + A +L M G PD +YN+AI ++ A L+ M +G P+ +
Sbjct: 510 GEQWELAVQLLTGMPARGVAPDVISYNSAIEACGKGEQWELALQLLKGMPTRGPKPDIIS 569
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
YN S R + L M G PNT S + C + E+ ++A+++ +M
Sbjct: 570 YNSAVTACAKSGRWREALGLLKDMATVGLTPNTVSYGAAIHACGKGEQWDVAVRILKEMQ 629
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G ++ D G+ EA ++ +G P ++
Sbjct: 630 THGATPNLITYSAAIDACAKQGRWKEAVDLLTDLRRQGLTPDAQTY 675
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 116/260 (44%), Gaps = 24/260 (9%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
D SYN I RQ A +++ +M E ++PDV++Y S I G+ +A D+L
Sbjct: 109 DTTSYNIAIAACSNGRQWATAVRLLREMPTEGVTPDVVTYNSAIAACSKGGRWKEAMDLL 168
Query: 69 KEM--KEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
+M G PD YN+AI R ++A L+++MV +G+ PN TYN
Sbjct: 169 TQMVAPTEGITPDVVTYNSAIAACSNGGRWKEAMDLLEQMVAQGVPPNLITYNSAIGACA 228
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+ +L ++ G P+T++ ++ C + + A+ L M L
Sbjct: 229 KGRRWEEAMDLLEEVIEQGFPPSTRTYNPVIDACAKGGRWLEAMDLLGQM---------L 279
Query: 187 VSDVLFDLL--------CDMGKLVEAEKSFLE-MIEKGHKPSQVSFRR-IKALMELANKQ 236
+D+ D++ C G+ + LE M +G P+ +S+ I A + +
Sbjct: 280 TNDIPADVISYSSVIAACGRGRRWKEAMDLLEQMRTQGVSPNVISYNSAIDACAKGDRWK 339
Query: 237 EALQNLSNKMALFG--PSMI 254
EAL +L +M G P++I
Sbjct: 340 EAL-DLLREMTTVGLVPTVI 358
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 97/223 (43%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV P++++YN I K R+ E+A ++E++ ++ P +Y +I G+
Sbjct: 208 MVAQGVPPNLITYNSAIGACAKGRRWEEAMDLLEEVIEQGFPPSTRTYNPVIDACAKGGR 267
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A D+L +M D +Y++ I +R ++A L+++M +G+SPN +YN
Sbjct: 268 WLEAMDLLGQMLTNDIPADVISYSSVIAACGRGRRWKEAMDLLEQMRTQGVSPNVISYNS 327
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + +L M G +P S C + AL+L +M +G
Sbjct: 328 AIDACAKGDRWKEALDLLREMTTVGLVPTVISYNSATAACAVNGRWVEALELLKEMPAQG 387
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + D G+ +A K M G P +SF
Sbjct: 388 IAPNTISYNSALDACAKGGQWEKAVKLLRGMSTVGSDPDIISF 430
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 65/125 (52%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G KPDI+SYN + K + +A +++ M ++P+ +SY + I G Q
Sbjct: 558 MPTRGPKPDIISYNSAVTACAKSGRWREALGLLKDMATVGLTPNTVSYGAAIHACGKGEQ 617
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A +LKEM+ +G P+ Y+AAI R ++A L+ ++ +GL+P+A TY
Sbjct: 618 WDVAVRILKEMQTHGATPNLITYSAAIDACAKQGRWKEAVDLLTDLRRQGLTPDAQTYLT 677
Query: 121 FFRVF 125
F
Sbjct: 678 VISAF 682
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 98/237 (41%), Gaps = 4/237 (1%)
Query: 22 KDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAA 81
K R A +++ + S D SY I Q A +L+EM G PD
Sbjct: 87 KGRDWRTALAALDEFKISGGSLDTTSYNIAIAACSNGRQWATAVRLLREMPTEGVTPDVV 146
Query: 82 AYNAAIRNYCIAKRLRDASGLMDEMV--EKGLSPNATTYNLFFRVFYWSNDLRSSWNLYC 139
YN+AI R ++A L+ +MV +G++P+ TYN + + +L
Sbjct: 147 TYNSAIAACSKGGRWKEAMDLLTQMVAPTEGITPDVVTYNSAIAACSNGGRWKEAMDLLE 206
Query: 140 RMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMG 199
+M+ G PN + + C + + E A+ L +++E+GF + + D G
Sbjct: 207 QMVAQGVPPNLITYNSAIGACAKGRRWEEAMDLLEEVIEQGFPPSTRTYNPVIDACAKGG 266
Query: 200 KLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFG--PSMI 254
+ +EA +M+ +S+ + A + + +L +M G P++I
Sbjct: 267 RWLEAMDLLGQMLTNDIPADVISYSSVIAACGRGRRWKEAMDLLEQMRTQGVSPNVI 323
>gi|255660854|gb|ACU25596.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 418
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 111/222 (50%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G++P +VS+N LI+ Y K +++ +++ M PDV +Y+ +I GL G+ D+A
Sbjct: 166 GLRPSVVSFNTLINGYIKLGDLDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEA 225
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++ EM + G P+ + I +C +++ A + +M+ +GLSP+ TYN
Sbjct: 226 NELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYG 285
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+L+ +L M+ G P+ S L+ ++ +EIAL+L N M+++
Sbjct: 286 LCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCKEGDLEIALELRNKMIQESIRLD 345
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ L LC G+ +AEK EM+ G KP ++ I
Sbjct: 346 DVAYTALISCLCREGRAGDAEKMLREMLSVGLKPDNGTYTMI 387
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 74/150 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ PD+++YN LI CK ++++ + ++++M + PD ISYT++I G G
Sbjct: 267 MLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCKEGD 326
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A ++ +M + D AY A I C R DA ++ EM+ GL P+ TY +
Sbjct: 327 LEIALELRNKMIQESIRLDDVAYTALISCLCREGRAGDAEKMLREMLSVGLKPDNGTYTM 386
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNT 150
F D +++ L M G +P
Sbjct: 387 IINEFCKKRDSKTASKLLREMQRDGPVPGV 416
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 78/196 (39%), Gaps = 35/196 (17%)
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
D KE+ E G +N ++ +C +R A + D + + GL P+ ++N +
Sbjct: 122 DFYKEVLECGYPASLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGY 181
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCK----------------------- 161
DL + L M +G P+ + L+ LCK
Sbjct: 182 IKLGDLDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNG 241
Query: 162 -----------RQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLE 210
+ EKV++A++++ M+ +G ++ + L LC G+L + E
Sbjct: 242 VTFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDE 301
Query: 211 MIEKGHKPSQVSFRRI 226
MI G KP ++S+ +
Sbjct: 302 MIMNGLKPDKISYTTL 317
>gi|147838532|emb|CAN65388.1| hypothetical protein VITISV_038361 [Vitis vinifera]
Length = 676
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 101/217 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ P++ ++N L V CKD K K +EKM +E PD+++Y ++I G+
Sbjct: 294 MERFGIAPNLYTFNILTHVLCKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLINSYCRKGR 353
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A + K M G PD +Y A + C R+R+A L MV +GLSP+ TYN
Sbjct: 354 LDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTYNT 413
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ S +L M+ G P++ +C LV+ ++ K AL L ++ G
Sbjct: 414 LIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSALNLVVELQRFG 473
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHK 217
+ L LC + A+ M + GHK
Sbjct: 474 VSISQDIYSYLIVALCRENRPFAAKNLLERMSQDGHK 510
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 118/250 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G PDIV+YN LI+ YC+ +++ A+ + + M + PD++SYT+++ GL G+
Sbjct: 329 MEEEGFDPDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGR 388
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + M G PD YN I YC +++++ L+ +M+ G+SP++ T +
Sbjct: 389 VREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWV 448
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ S+ NL + G + +L+ R+ + A L M + G
Sbjct: 449 LVEGYGKEGKFLSALNLVVELQRFGVSISQDIYSYLIVALCRENRPFAAKNLLERMSQDG 508
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ + + L C + EA +EM++K KP+ ++R + + ++ +
Sbjct: 509 HKXELEIYNELIKSFCQCDCIAEALLLKMEMVDKEIKPNLATYRAVJGCLSRLSRSMEGE 568
Query: 241 NLSNKMALFG 250
+L +M G
Sbjct: 569 SLVGEMVASG 578
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 110/247 (44%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G P +++ N L++ K ++ +++ E+M I+P++ ++ + L G
Sbjct: 259 MLRVGFVPTVITSNYLLNGLLKLNYTDRCWEVYEEMERFGIAPNLYTFNILTHVLCKDGD 318
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
K L++M+E G PD YN I +YC RL DA L M +G+ P+ +Y
Sbjct: 319 TGKVNKFLEKMEEEGFDPDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTA 378
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+R + L+ RM+ G P+ + L+ ++ K++ + L +DM+ G
Sbjct: 379 LMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNG 438
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
VL + GK + A +E+ G SQ + + + N+ A +
Sbjct: 439 ISPDSFTCWVLVEGYGKEGKFLSALNLVVELQRFGVSISQDIYSYLIVALCRENRPFAAK 498
Query: 241 NLSNKMA 247
NL +M+
Sbjct: 499 NLLERMS 505
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 94/214 (43%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
D V ++ L+ Y + +V + + +M P VI+ ++ GL + D+ +V
Sbjct: 232 DPVVFDMLVKAYLRMGRVREGLRSFRRMLRVGFVPTVITSNYLLNGLLKLNYTDRCWEVY 291
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
+EM+ +G P+ +N C + +++M E+G P+ TYN +
Sbjct: 292 EEMERFGIAPNLYTFNILTHVLCKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLINSYCRK 351
Query: 129 NDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVS 188
L ++ LY M G +P+ S L+ ++ +V A QL++ MV +G I+
Sbjct: 352 GRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTY 411
Query: 189 DVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
+ L C GK+ E+ +MI G P +
Sbjct: 412 NTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFT 445
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 99/218 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV PD+VSY L++ CK+ +V +A+++ +M +SPD+++Y ++I G G+
Sbjct: 364 MYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGK 423
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++R +L +M G PD+ + Y + A L+ E+ G+S + Y+
Sbjct: 424 MQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSALNLVVELQRFGVSISQDIYSY 483
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
N ++ NL RM G + L+K + + + AL L +MV+K
Sbjct: 484 LIVALCRENRPFAAKNLLERMSQDGHKXELEIYNELIKSFCQCDCIAEALLLKMEMVDKE 543
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
+ + L + + +E E EM+ G P
Sbjct: 544 IKPNLATYRAVJGCLSRLSRSMEGESLVGEMVASGXLP 581
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 79/188 (42%), Gaps = 35/188 (18%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ PDIV+YN LI YCK+ +++++ ++ M ISPD + ++ G G G+
Sbjct: 399 MVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGK 458
Query: 61 -----------------------------------PDKARDVLKEMKEYGCYPDAAAYNA 85
P A+++L+ M + G + YN
Sbjct: 459 FLSALNLVVELQRFGVSISQDIYSYLIVALCRENRPFAAKNLLERMSQDGHKXELEIYNE 518
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
I+++C + +A L EMV+K + PN TY + +L M+ +G
Sbjct: 519 LIKSFCQCDCIAEALLLKMEMVDKEIKPNLATYRAVJGCLSRLSRSMEGESLVGEMVASG 578
Query: 146 CLPNTQSC 153
LP+ + C
Sbjct: 579 XLPDLEIC 586
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 78/169 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G K ++ YN LI +C+ + +A + +M D++I P++ +Y ++JG L + +
Sbjct: 504 MSQDGHKXELEIYNELIKSFCQCDCIAEALLLKMEMVDKEIKPNLATYRAVJGCLSRLSR 563
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ ++ EM G PD A YC + A L+ ++ + ++N
Sbjct: 564 SMEGESLVGEMVASGXLPDLEICRALFYGYCRENDIDKAESLLSFXAKEFQIHDTESFNA 623
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIA 169
R+ D+ S + M+ G LPN +C +++ + +V+ A
Sbjct: 624 LIRITSAKGDIARSLEIQDMMLKMGLLPNPLTCKYVIDGLWKARRVDSA 672
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 85/230 (36%), Gaps = 34/230 (14%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYK----IVEKMRD----EDISPDVISYTSIIGG 54
++G++P +Y ++ R +A K +VE ++D ED+ ++I T
Sbjct: 172 DLGLRPSTQNYCIIVHTLAWSRNFSQAIKFLCELVELVKDDLPGEDVFKNLILCTE---- 227
Query: 55 LGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPN 114
C D ++ ++ Y R+R+ M+ G P
Sbjct: 228 --------------------DCNWDPVVFDMLVKAYLRMGRVREGLRSFRRMLRVGFVPT 267
Query: 115 ATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLW 173
T N N W +Y M G PN + L LCK + ++ +
Sbjct: 268 VITSNYLLNGLLKLNYTDRCWEVYEEMERFGIAPNLYTFNILTHVLCKDGDTGKVN-KFL 326
Query: 174 NDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
M E+GF I+ + L + C G+L +A + M +G P VS+
Sbjct: 327 EKMEEEGFDPDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSY 376
>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 729
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 121/249 (48%), Gaps = 6/249 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
++E GV PDIV+YN LI Y +E+A++++ M + SP V +Y ++I GL G+
Sbjct: 261 VQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGK 320
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A++V EM G PD+ Y + + C + + + +M + + P+ ++
Sbjct: 321 YERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSS 380
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+F S +L + + + G +P+ L++ R+ + +A+ L N+M+++G
Sbjct: 381 MMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQG 440
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
++ + + LC L EA+K F EM E+ P + L L + L
Sbjct: 441 CAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYT------LTILIDGHCKLG 494
Query: 241 NLSNKMALF 249
NL N M LF
Sbjct: 495 NLQNAMELF 503
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 111/231 (48%), Gaps = 10/231 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGL---GL 57
++E G+ PD V Y LI YC+ + A + +M + + DV++Y +I+ GL +
Sbjct: 401 VKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKM 460
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
+G+ DK + EM E +PD+ I +C L++A L +M EK + + T
Sbjct: 461 LGEADK---LFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVT 517
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDM 176
YN F D+ ++ ++ M+ LP S LV LC + E A ++W++M
Sbjct: 518 YNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAE-AFRVWDEM 576
Query: 177 VEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLE-MIEKGHKPSQVSFRRI 226
+ K +++ + + C G + E SFLE MI +G P +S+ +
Sbjct: 577 ISKNIKPTVMICNSMIKGYCRSGNASDGE-SFLEKMISEGFVPDCISYNTL 626
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 113/246 (45%), Gaps = 9/246 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E + PD + LID +CK ++ A ++ +KM+++ I DV++Y +++ G G VG
Sbjct: 471 MTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGD 530
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A+++ +M P +Y+ + C L +A + DEM+ K + P N
Sbjct: 531 IDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNS 590
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + S + + +M+ G +P+ S L+ R+E + A L M E+
Sbjct: 591 MIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQ 650
Query: 181 FGSYILVSDV-----LFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELAN 234
G LV DV + C ++ EAE +MIE+G P + ++ I + N
Sbjct: 651 GG---LVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDN 707
Query: 235 KQEALQ 240
EA +
Sbjct: 708 LTEAFR 713
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 102/254 (40%), Gaps = 35/254 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ PD +Y L+ CK V + K+ MR D+ PD++ ++S++ G
Sbjct: 331 MLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGN 390
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA +KE G PD Y I+ YC + A L +EM+++G + + TYN
Sbjct: 391 LDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNT 450
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV----KLCKRQEKVEI-------- 168
L + L+ M P++ + L+ KL Q +E+
Sbjct: 451 ILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKR 510
Query: 169 -----------------------ALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
A ++W DMV K + +L + LC G L EA
Sbjct: 511 IRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAF 570
Query: 206 KSFLEMIEKGHKPS 219
+ + EMI K KP+
Sbjct: 571 RVWDEMISKNIKPT 584
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 76/146 (52%), Gaps = 2/146 (1%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+KP ++ N +I YC+ +EKM E PD ISY ++I G KA
Sbjct: 581 IKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAF 640
Query: 66 DVLKEMKEY--GCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
++K+M+E G PD YN+ + +C ++++A ++ +M+E+G++P+ +TY
Sbjct: 641 GLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMIN 700
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPN 149
F ++L ++ ++ M+ G P+
Sbjct: 701 GFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 63/112 (56%), Gaps = 2/112 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDED--ISPDVISYTSIIGGLGLVGQPD 62
G PD +SYN LI + ++ + KA+ +V+KM +E + PDV +Y SI+ G Q
Sbjct: 615 GFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMK 674
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPN 114
+A VL++M E G PD + Y I + L +A + DEM+++G SP+
Sbjct: 675 EAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 97/224 (43%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+R G I + N LI + VE A+ + +++ + +V + ++ L G+
Sbjct: 191 LRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGK 250
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+K L +++E G YPD YN I Y + +A LM+ M KG SP TYN
Sbjct: 251 MEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNT 310
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCM-FLVKLCKRQEKVEIALQLWNDMVEK 179
+ ++ M+ +G P++ + L++ CK+ + VE ++++DM +
Sbjct: 311 VINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETE-KVFSDMRSR 369
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + L G L +A F + E G P V +
Sbjct: 370 DVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIY 413
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 94/218 (43%), Gaps = 2/218 (0%)
Query: 13 YNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMK 72
++ LI Y + R++ +A++ +R + + + + ++IG L +G + A V +E+
Sbjct: 168 FDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEIS 227
Query: 73 EYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLR 132
G + N + C ++ + ++ EKG+ P+ TYN + +
Sbjct: 228 RSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLME 287
Query: 133 SSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYILVSDVL 191
++ L M G G P + ++ LCK K E A +++ +M+ G L
Sbjct: 288 EAFELMNAMPGKGFSPGVYTYNTVINGLCK-HGKYERAKEVFAEMLRSGLSPDSTTYRSL 346
Query: 192 FDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKAL 229
C G +VE EK F +M + P V F + +L
Sbjct: 347 LMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSL 384
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 77/201 (38%), Gaps = 37/201 (18%)
Query: 76 CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSW 135
C + + ++ IR Y A++LR+A + KG + + N + +W
Sbjct: 161 CGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAW 220
Query: 136 NLYCRMMGTGCLPNTQSCMFLVK-LCK--RQEKV-------------------------- 166
+Y + +G N + +V LCK + EKV
Sbjct: 221 GVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAY 280
Query: 167 ------EIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQ 220
E A +L N M KGF + + + + LC GK A++ F EM+ G P
Sbjct: 281 SSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDS 340
Query: 221 VSFRRIKALMELANKQEALQN 241
++R + LME K + ++
Sbjct: 341 TTYRSL--LMEACKKGDVVET 359
>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 915
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 119/226 (52%), Gaps = 1/226 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+KP+I +Y LID C ++EKA +++ +M ++ + P+VI+Y ++I G G
Sbjct: 349 MEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGM 408
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A DV++ M+ P+ YN I+ YC + + A G++++M+E+ + P+ TYN
Sbjct: 409 IEDALDVVELMESRNLRPNTRTYNELIKGYC-KRNVHKAMGVLNKMLERKVLPDVVTYNS 467
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
S + S++ L M G +P+ + ++ + ++VE A L++ + +K
Sbjct: 468 LIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKD 527
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+++ L D C GK+ EA +M+ K P+ ++F +
Sbjct: 528 VIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNAL 573
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 117/233 (50%), Gaps = 1/233 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ PD +Y +ID CK ++VE+A + + + +D+ P+V+ YT++I G G+
Sbjct: 488 MNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGK 547
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A +L++M C P++ +NA I C +L++A+ L ++MV+ L P +T +
Sbjct: 548 VNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTI 607
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
D ++ + +M+ +G P+ + ++ R+ +++ A + M E G
Sbjct: 608 LIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENG 667
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF-RRIKALMEL 232
+ L D+G+ A M + G +PSQ +F IK L+E+
Sbjct: 668 VSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEM 720
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 103/223 (46%), Gaps = 1/223 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++P+ +YN LI YCK R V KA ++ KM + + PDV++Y S+I G G
Sbjct: 419 MESRNLRPNTRTYNELIKGYCK-RNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGN 477
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A +L M + G PD Y + I + C +KR+ +A L D + +K + PN Y
Sbjct: 478 FDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTA 537
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + + + +M+ CLPN+ + L+ K++ A L MV+
Sbjct: 538 LIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKID 597
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ +L L G A + F +M+ G KP ++
Sbjct: 598 LQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTY 640
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 106/227 (46%), Gaps = 2/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E V P+I +YN +++ YCK VE+A + V + + + PD +YTS+I G
Sbjct: 209 MLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQRKD 268
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A V KEM GC + AY I C+ +R+ +A L +M + P TY +
Sbjct: 269 LDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTV 328
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ S + NL M G PN + L+ Q K+E A +L M+EKG
Sbjct: 329 LIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKG 388
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIE-KGHKPSQVSFRRI 226
++ + L + C G ++E +E++E + +P+ ++ +
Sbjct: 389 LMPNVITYNALINGYCKRG-MIEDALDVVELMESRNLRPNTRTYNEL 434
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 108/220 (49%), Gaps = 3/220 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G + + V+Y LI C +R++++A + KM+D+D P V +YT +I L + +A
Sbjct: 283 GCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEA 342
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+++KEM+E G P+ Y I + C +L A L+ +M+EKGL PN TYN
Sbjct: 343 LNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALING 402
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGS 183
+ + + ++ M PNT++ L+K CKR V A+ + N M+E+
Sbjct: 403 YCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKRN--VHKAMGVLNKMLERKVLP 460
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + L D C G A + M ++G P ++
Sbjct: 461 DVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTY 500
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 104/225 (46%), Gaps = 2/225 (0%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E+ K I YN L++ + V++ ++ +M ++ + P++ +Y ++ G VG +
Sbjct: 176 ELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVE 235
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
+A + + E G PD Y + I YC K L A + EM KG N Y
Sbjct: 236 EANQYVSMIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLI 295
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGF 181
+ + +L+ +M C P ++ L+K LC + K E AL L +M EKG
Sbjct: 296 HGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSE-ALNLVKEMEEKGI 354
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
I VL D LC KL +A + +M+EKG P+ +++ +
Sbjct: 355 KPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNAL 399
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 118/269 (43%), Gaps = 57/269 (21%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G KPD +Y I YC++ +++ A +V KM++ +SPD+ +Y+S+I G G +G+
Sbjct: 628 MLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGR 687
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASG------------------L 102
+ A VLK M + GC P + + I++ K + G L
Sbjct: 688 TNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVEL 747
Query: 103 MDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLY-----------------------C 139
+++MVE G++PNA +Y +LR + ++ C
Sbjct: 748 LEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNALLSCCC 807
Query: 140 R-------------MMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ M+ G LP +SC L+ +L K+ EK E ++ ++++ G+
Sbjct: 808 KLEKHNEAAKVVDDMICVGHLPQLESCKILICRLYKKGEK-ERGTSVFQNLLQCGYYDDE 866
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEK 214
L ++ D + G LVEA ++EK
Sbjct: 867 LAWKIIIDGVGKQG-LVEAFYELFNVMEK 894
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/151 (19%), Positives = 69/151 (45%), Gaps = 1/151 (0%)
Query: 31 KIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEY-GCYPDAAAYNAAIRN 89
+++EKM + ++P+ SY ++ G+ +G A V M++ G P +NA +
Sbjct: 746 ELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNALLSC 805
Query: 90 YCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPN 149
C ++ +A+ ++D+M+ G P + + Y + +++ ++ G +
Sbjct: 806 CCKLEKHNEAAKVVDDMICVGHLPQLESCKILICRLYKKGEKERGTSVFQNLLQCGYYDD 865
Query: 150 TQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ +Q VE +L+N M + G
Sbjct: 866 ELAWKIIIDGVGKQGLVEAFYELFNVMEKNG 896
>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
Length = 996
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 112/242 (46%), Gaps = 19/242 (7%)
Query: 1 MREM---GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGL 57
+REM G PD +Y+ +I + C +V+ A+ + E+M+ + PDV +YT +I
Sbjct: 468 IREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCK 527
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
VG +AR EM GC P+ Y A I Y A+++ A+ L + M+ +G PN T
Sbjct: 528 VGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVT 587
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCL----------------PNTQSCMFLVKLCK 161
Y S + + +Y RM G + PN + LV
Sbjct: 588 YTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLC 647
Query: 162 RQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQV 221
+ KV+ A L + M +G +V D L D C +GKL EA+ F +M E+G+ P+
Sbjct: 648 KAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVY 707
Query: 222 SF 223
++
Sbjct: 708 TY 709
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 122/271 (45%), Gaps = 18/271 (6%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G P++V+Y LI Y K R++ A ++ E M E P+V++YT++I G GQ +KA
Sbjct: 545 GCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKA 604
Query: 65 RDVLKEMKEYGCYPDAA----------------AYNAAIRNYCIAKRLRDASGLMDEMVE 108
+ M+ PD Y A + C A ++++A L+D M
Sbjct: 605 CQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSV 664
Query: 109 KGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEI 168
+G PN Y+ F L + ++ +M G PN + L+ + +++++
Sbjct: 665 EGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDL 724
Query: 169 ALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKA 228
AL++ + M+E +++ + D LC +GK EA + M EKG P+ V++ +
Sbjct: 725 ALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMID 784
Query: 229 LMELANKQEALQNLSNKMALFG--PSMIPKR 257
A K + L +M G P+ + R
Sbjct: 785 GFGKAGKVDKCLELMRQMGAKGCAPNFVTYR 815
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 125/278 (44%), Gaps = 40/278 (14%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G P++ +Y+ LID KD++++ A K++ +M + +P+VI YT +I GL VG+
Sbjct: 697 MSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGK 756
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A ++ M+E GC+P+ Y A I + A ++ LM +M KG +PN TY +
Sbjct: 757 TDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRV 816
Query: 121 FF-------------------RVFYWSNDLRS--------------SWNLYCRMMGTGCL 147
+ YW + S L + +
Sbjct: 817 LINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLGLLDEIAENVAV 876
Query: 148 PNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCD----MGKLVE 203
P + L+ + ++E+AL+L +M SY L+ L + K+ +
Sbjct: 877 PIIPAYRILIDSFCKAGRLELALELHKEM--SSCTSYSAADKDLYSSLIESLSLASKVDK 934
Query: 204 AEKSFLEMIEKGHKPS-QVSFRRIKALMELANKQEALQ 240
A + + +MI++G P + F +K L+ + +EALQ
Sbjct: 935 AFELYADMIKRGGIPELSIFFYLVKGLIRINRWEEALQ 972
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 111/277 (40%), Gaps = 51/277 (18%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMR-DEDI---------------SPD 44
M G P++V+Y LID +CK Q+EKA +I +MR + DI P+
Sbjct: 576 MLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPN 635
Query: 45 VISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMD 104
+ +Y +++ GL + +ARD+L M GC P+ Y+A I +C +L +A +
Sbjct: 636 IFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFT 695
Query: 105 EMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGT-------------------- 144
+M E+G PN TY+ + L + + RM+
Sbjct: 696 KMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVG 755
Query: 145 ---------------GCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSD 189
GC PN + ++ + KV+ L+L M KG +
Sbjct: 756 KTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYR 815
Query: 190 VLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
VL + C G L +A + EM + +R++
Sbjct: 816 VLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKV 852
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 107/268 (39%), Gaps = 8/268 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR P++V+Y L+ + RQ+ + +I+ M E P + S+I G
Sbjct: 325 MRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGD 384
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRD------ASGLMDEMVEKGLSPN 114
A +LK+M + GC P YN I C ++L A EM++ + N
Sbjct: 385 YSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLN 444
Query: 115 ATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWN 174
+ R + ++++ MM G +P+T + ++ L KV+ A L+
Sbjct: 445 KVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFE 504
Query: 175 DMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELAN 234
+M + +L D C +G L +A K F EM+ G P+ V++ + A
Sbjct: 505 EMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKAR 564
Query: 235 KQEALQNLSNKMALFGPSMIPKREEYLA 262
K + L M IP Y A
Sbjct: 565 KMSSANELFEMM--LSEGCIPNVVTYTA 590
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 99/217 (45%), Gaps = 6/217 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQV------EKAYKIVEKMRDEDISPDVISYTSIIGG 54
M + G +P V YN LI C + ++ E A K +M D + + ++ +++
Sbjct: 395 MGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARC 454
Query: 55 LGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPN 114
L G+ +KA +++EM G PD + Y+ I C A ++ +A L +EM + P+
Sbjct: 455 LCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPD 514
Query: 115 ATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWN 174
TY + F L+ + + M+ GC PN + L+ + K+ A +L+
Sbjct: 515 VFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFE 574
Query: 175 DMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEM 211
M+ +G ++ L D C G++ +A + + M
Sbjct: 575 MMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARM 611
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 108/246 (43%), Gaps = 19/246 (7%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G D + C + + CK + +A ++EK E+ D + YT +I GL
Sbjct: 258 MSDSGFNMDGYTLGCFVHLLCKAGRWREALALIEK---EEFKLDTVIYTQMISGLCEASL 314
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKR-LRDASGLMDEMVEKGLSPNATTYN 119
++A D L M+ C P+ Y + C+ KR L ++ M+ +G P+ +N
Sbjct: 315 FEEAMDFLSRMRSSSCIPNVVTYRILLCG-CLRKRQLGRCKRILSMMITEGCYPSRRIFN 373
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEK------VEIALQLW 173
+ S D ++ L +M GC P L+ EK +E+A + +
Sbjct: 374 SLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAY 433
Query: 174 NDMVEKGFGSYILVSDV----LFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKAL 229
+M++ ++++++ V L LC GK +A EM+ KG P ++ ++ L
Sbjct: 434 GEMLD----AHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGL 489
Query: 230 MELANK 235
+ A+K
Sbjct: 490 LCNASK 495
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 92/242 (38%), Gaps = 70/242 (28%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E P+++ Y +ID CK + ++AY+++ M ++ P+V++YT++I G G G+
Sbjct: 732 MLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGK 791
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDAS-------------------- 100
DK +++++M GC P+ Y I + C A L DA
Sbjct: 792 VDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRK 851
Query: 101 -------------GLMDEMVEKGLSPNATTYNLFFRVFYWSN------------------ 129
GL+DE+ E P Y + F +
Sbjct: 852 VIEGFNREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSY 911
Query: 130 -----DLRSS--------------WNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIAL 170
DL SS + LY M+ G +P +LVK R + E AL
Sbjct: 912 SAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRWEEAL 971
Query: 171 QL 172
QL
Sbjct: 972 QL 973
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 41/210 (19%), Positives = 85/210 (40%), Gaps = 3/210 (1%)
Query: 14 NCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKE 73
N LI C++ A + + +++D P ++Y +++ + D A V +EM +
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSD 260
Query: 74 YGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRS 133
G D + C A R R+A L++ ++ + Y ++
Sbjct: 261 SGFNMDGYTLGCFVHLLCKAGRWREALALIE---KEEFKLDTVIYTQMISGLCEASLFEE 317
Query: 134 SWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFD 193
+ + RM + C+PN + L+ C R+ ++ ++ + M+ +G + + L
Sbjct: 318 AMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIH 377
Query: 194 LLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
C G A K +M + G +P V +
Sbjct: 378 AYCRSGDYSYAYKLLKKMGDCGCQPGYVVY 407
Score = 37.0 bits (84), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 49/99 (49%), Gaps = 2/99 (2%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRD--EDISPDVISYTSIIGGLGLVGQPDKAR 65
P I +Y LID +CK ++E A ++ ++M + D Y+S+I L L + DKA
Sbjct: 877 PIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAF 936
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMD 104
++ +M + G P+ + + ++ R +A L D
Sbjct: 937 ELYADMIKRGGIPELSIFFYLVKGLIRINRWEEALQLSD 975
>gi|357111163|ref|XP_003557384.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Brachypodium distachyon]
Length = 821
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 122/276 (44%), Gaps = 46/276 (16%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GVKP+IVSYN L+ Y A I + ++ + PDV+SYT+++ G GQP+KA
Sbjct: 362 GVKPNIVSYNALLGAYASRGMHADALGIFKLLKQNGLRPDVVSYTTLLNAYGRSGQPEKA 421
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSP----------- 113
R+ KEM++ C P+ +YNA I Y A ++A L+ EM + G+ P
Sbjct: 422 REAFKEMRKNSCRPNIVSYNALIDAYGSAGMFKEAISLLHEMEKDGIPPDVVSISTLLTA 481
Query: 114 ------------------------NATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPN 149
N YN + D + LY MM + P+
Sbjct: 482 CGRCRQITKIDTILEAAKSRGIKLNIVCYNSGIGSYLNFGDYGKALELYAVMMASNVNPD 541
Query: 150 TQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCD---MGKLVEAE 205
+ L+ LCK + E +L+ + DMV+ L +V L+C GKL EAE
Sbjct: 542 AVTYNILISGLCKVGKYAE-SLKFFEDMVDLRIP---LTKEVYSSLICSYVKQGKLTEAE 597
Query: 206 KSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQN 241
+F M E G P +++ A++E N + +N
Sbjct: 598 STFSSMKESGCLPDVLTY---TAMIEAYNDDGSWRN 630
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 97/225 (43%), Gaps = 2/225 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV PD+V++N ++ + Q KA E M+ +I+PD + +I L GQ
Sbjct: 251 MTRNGVGPDLVTHNIVLSAFKNGSQYSKAIAYFEMMKGANIAPDTFTLNIVIHCLVKDGQ 310
Query: 61 PDKARDVLKEMKE--YGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
+A ++L M+E C PD Y + + +Y + ++ D + D MV +G+ PN +Y
Sbjct: 311 YGEAIELLNSMREKRTQCPPDVVTYTSIMHSYYVCGKVEDCKAVFDMMVAEGVKPNIVSY 370
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
N + + ++ + G P+ S L+ R + E A + + +M +
Sbjct: 371 NALLGAYASRGMHADALGIFKLLKQNGLRPDVVSYTTLLNAYGRSGQPEKAREAFKEMRK 430
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I+ + L D G EA EM + G P VS
Sbjct: 431 NSCRPNIVSYNALIDAYGSAGMFKEAISLLHEMEKDGIPPDVVSI 475
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 79/178 (44%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
+ G+K +IV YN I Y KA ++ M +++PD ++Y +I GL VG+
Sbjct: 499 KSRGIKLNIVCYNSGIGSYLNFGDYGKALELYAVMMASNVNPDAVTYNILISGLCKVGKY 558
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
++ ++M + Y++ I +Y +L +A M E G P+ TY
Sbjct: 559 AESLKFFEDMVDLRIPLTKEVYSSLICSYVKQGKLTEAESTFSSMKESGCLPDVLTYTAM 618
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ R++W+L+ M G P+ C L++ R + E LQL M EK
Sbjct: 619 IEAYNDDGSWRNAWDLFKEMEGNTVQPDAIICSSLMEALNRGSQHERVLQLMELMKEK 676
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 89/228 (39%), Gaps = 8/228 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E KPD YN LI + + Q A I++ M I P +Y ++I G G
Sbjct: 181 MQEWRCKPDADIYNSLIHAHARAGQWRWAINIMDDMLRAAIPPSRTTYNNVINACGAAGN 240
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA ++ K+M G PD +N + + + A + M ++P+ T N+
Sbjct: 241 WKKALELCKKMTRNGVGPDLVTHNIVLSAFKNGSQYSKAIAYFEMMKGANIAPDTFTLNI 300
Query: 121 FFRVFYWSNDLRSSWNLYCRMM--GTGCLPNT---QSCMFLVKLCKRQEKVEIALQLWND 175
+ L M T C P+ S M +C KVE +++
Sbjct: 301 VIHCLVKDGQYGEAIELLNSMREKRTQCPPDVVTYTSIMHSYYVCG---KVEDCKAVFDM 357
Query: 176 MVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
MV +G I+ + L G +A F + + G +P VS+
Sbjct: 358 MVAEGVKPNIVSYNALLGAYASRGMHADALGIFKLLKQNGLRPDVVSY 405
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 92/215 (42%), Gaps = 6/215 (2%)
Query: 13 YNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMK 72
Y +I ++ + Q+++A + +M++ PD Y S+I GQ A +++ +M
Sbjct: 158 YGMMIRLHARHSQIDQARGLFFEMQEWRCKPDADIYNSLIHAHARAGQWRWAINIMDDML 217
Query: 73 EYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLR 132
P YN I A + A L +M G+ P+ T+N+ F +
Sbjct: 218 RAAIPPSRTTYNNVINACGAAGNWKKALELCKKMTRNGVGPDLVTHNIVLSAFKNGSQYS 277
Query: 133 SSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG---SYILVSD 189
+ + M G P+T + ++ + + A++L N M EK + +
Sbjct: 278 KAIAYFEMMKGANIAPDTFTLNIVIHCLVKDGQYGEAIELLNSMREKRTQCPPDVVTYTS 337
Query: 190 VLFD-LLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ +C GK+ + + F M+ +G KP+ VS+
Sbjct: 338 IMHSYYVC--GKVEDCKAVFDMMVAEGVKPNIVSY 370
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 50/115 (43%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M V PD V+YN LI CK + ++ K E M D I Y+S+I G+
Sbjct: 533 MMASNVNPDAVTYNILISGLCKVGKYAESLKFFEDMVDLRIPLTKEVYSSLICSYVKQGK 592
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNA 115
+A MKE GC PD Y A I Y R+A L EM + P+A
Sbjct: 593 LTEAESTFSSMKESGCLPDVLTYTAMIEAYNDDGSWRNAWDLFKEMEGNTVQPDA 647
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 55/107 (51%), Gaps = 2/107 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E G PD+++Y +I+ Y D A+ + ++M + PD I +S++ L Q
Sbjct: 603 MKESGCLPDVLTYTAMIEAYNDDGSWRNAWDLFKEMEGNTVQPDAIICSSLMEALNRGSQ 662
Query: 61 PDKARDVLKEMKEYGCYP-DAAAYNAAIRNYCIAKRLRDASGLMDEM 106
++ +++ MKE C P + AY I + + + + AS +++ +
Sbjct: 663 HERVLQLMELMKE-KCIPLNQKAYFEIIASCSMLRDWKTASEIIEHL 708
>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 111/235 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E G D +YN +ID +CK +V KAY+++E+M+ + P V++Y S+I GL + +
Sbjct: 360 MKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDR 419
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + +E K G + Y++ I + R+ +A +M+E+++KGL+PN T+N
Sbjct: 420 LDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNC 479
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ + + M C PN + L+ R K A W +M + G
Sbjct: 480 LLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLG 539
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANK 235
+ + L G ++EA F G P S+ + + ANK
Sbjct: 540 LKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANK 594
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 112/226 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ P++++ N +ID CK +++E+A I E M D+ +P+ ++++S+I GLG G+
Sbjct: 185 MERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGR 244
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A + ++M + G P A Y + IR++ R D + EMV G SP+ T N
Sbjct: 245 VDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINT 304
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + + L+ + G +P+ +S L+ + +L+ M E+G
Sbjct: 305 YMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQG 364
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + D C GK+ +A + EM KGH P+ V++ +
Sbjct: 365 CVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSV 410
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 101/215 (46%), Gaps = 11/215 (5%)
Query: 22 KDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLV----------GQPDKARDVLKEM 71
K R++ +A+ I++ MR P +YT +IG +GL+ + D+A ++ +++
Sbjct: 22 KSRKLREAFDIIQTMRKFKFRPAFSAYTILIGKVGLMLLFPWVLCKANRLDEAVELFEQL 81
Query: 72 KEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDL 131
++ P A AYN I Y A + +A GL++ KG P+ YN +
Sbjct: 82 EQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRV 141
Query: 132 RSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVL 191
+ ++ M +PN + L+ + R+ K+ AL++ +DM G +L +++
Sbjct: 142 EEALRIF-EEMKRDAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIM 200
Query: 192 FDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
D LC KL EA F M +K P+ V+F +
Sbjct: 201 IDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSL 235
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 94/219 (42%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P+ V+++ LID K +V+ AY + EKM D P I YTS+I G+ + +
Sbjct: 227 PNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKI 286
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
KEM GC PD N + A L E+ G P+A +Y++
Sbjct: 287 YKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVK 346
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ ++ L+ M GC+ +T + ++ + KV A QL +M KG ++
Sbjct: 347 AGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVT 406
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ D L + +L EA F E G K + V + +
Sbjct: 407 YGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSL 445
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 83/169 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+ + G+ P++ ++NCL+D K ++ +A + M+D P+ I+Y+ +I GL V +
Sbjct: 465 LMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRK 524
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA +EM++ G P+ Y I A + +ASGL G P++ +YN
Sbjct: 525 FNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNA 584
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIA 169
+N ++ L+ GC +T++C+ L+ + E +E A
Sbjct: 585 MIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDALHKAECLEQA 633
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 114/250 (45%), Gaps = 14/250 (5%)
Query: 1 MREMGVKPDIVSYNCLID----------VYCKDRQVEKAYKIVEKMRDEDISPDVISYTS 50
MR+ +P +Y LI V CK ++++A ++ E++ P +Y +
Sbjct: 36 MRKFKFRPAFSAYTILIGKVGLMLLFPWVLCKANRLDEAVELFEQLEQNRKVPCAYAYNT 95
Query: 51 IIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKG 110
+I G G G+ D+A +L+ K G P AYN + +R+ +A + +EM ++
Sbjct: 96 MIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEM-KRD 154
Query: 111 LSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIA 169
PN TYN+ + L ++ + M G PN + ++ +LCK Q K+E A
Sbjct: 155 AVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQ-KLEEA 213
Query: 170 LQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKA 228
++ M +K + L D L G++ +A + +M++ GH P + + I++
Sbjct: 214 CSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRS 273
Query: 229 LMELANKQEA 238
+ K++
Sbjct: 274 FFKCGRKEDG 283
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 90/191 (47%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+K ++V Y+ LID + K ++++AY I+E++ + ++P+V ++ ++ L + ++A
Sbjct: 434 GIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEA 493
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ MK+ C P+ Y+ I C ++ A EM + GL PN TY
Sbjct: 494 LICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISG 553
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ ++ + L+ R G +P++ S +++ K A L+ + KG +
Sbjct: 554 LAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIH 613
Query: 185 ILVSDVLFDLL 195
VL D L
Sbjct: 614 TKTCVVLLDAL 624
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 93/211 (44%), Gaps = 1/211 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P +YN +I Y + ++AY ++E+ + + P VI+Y I+ LG + ++A +
Sbjct: 88 PCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRI 147
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
+EMK P+ YN I C +L A + D+M GL PN T N+
Sbjct: 148 FEEMKR-DAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCK 206
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ L + +++ M C PN + L+ + +V+ A L+ M++ G +V
Sbjct: 207 AQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIV 266
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
L G+ + K + EM+ G P
Sbjct: 267 YTSLIRSFFKCGRKEDGHKIYKEMVHTGCSP 297
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 104/240 (43%), Gaps = 1/240 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G P + Y LI + K + E +KI ++M SPD+ + + + G+
Sbjct: 255 MLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGE 314
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+K R + +E+ +G PDA +Y+ I A + L M E+G + YN
Sbjct: 315 TEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNA 374
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F S + ++ L M G P + ++ + ++++ A L+ + G
Sbjct: 375 VIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNG 434
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEAL 239
++V L D +G++ EA E+++KG P+ ++ + AL++ EAL
Sbjct: 435 IKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEAL 494
>gi|15240249|ref|NP_200948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171473|sp|Q9FLJ4.1|PP440_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g61400
gi|9757861|dbj|BAB08495.1| unnamed protein product [Arabidopsis thaliana]
gi|332010079|gb|AED97462.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 654
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 97/180 (53%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV P++ YNCLI +CK + +A ++ +M ++SPDV +YT +I GL + Q
Sbjct: 330 MVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQ 389
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + ++MK +P +A YN+ I YC + A L EM G+ PN T++
Sbjct: 390 VAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFST 449
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ D++++ LY M G +P+ + L+ ++ ++ AL+L++DM+E G
Sbjct: 450 LIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAG 509
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 122/247 (49%), Gaps = 1/247 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ GV P++ +Y+ +ID YCK V +AY + +++ ++ P+V+ + +++ G +
Sbjct: 260 MKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARE 319
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
AR + M ++G P+ YN I +C + + +A GL+ EM LSP+ TY +
Sbjct: 320 LVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTI 379
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + L+ +M P++ + L+ ++ +E AL L ++M G
Sbjct: 380 LINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASG 439
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
I+ L D C++ + A + EM KG P V++ I A + AN +EAL
Sbjct: 440 VEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEAL 499
Query: 240 QNLSNKM 246
+ S+ +
Sbjct: 500 RLYSDML 506
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 106/223 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + + PD+ +Y LI+ C + QV +A ++ +KM++E I P +Y S+I G
Sbjct: 365 MESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYN 424
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A D+ EM G P+ ++ I YC + ++ A GL EM KG+ P+ TY
Sbjct: 425 MEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTA 484
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ +++ + LY M+ G PN + LV ++ ++ +A+ + + ++
Sbjct: 485 LIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQR 544
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ L + LC G ++ A + F +M G P S+
Sbjct: 545 SCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSY 587
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 119/259 (45%), Gaps = 8/259 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ PD+ Y L K K K++++M I P+V YT I L +
Sbjct: 190 MISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNK 249
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A + + MK++G P+ Y+A I YC +R A GL E++ L PN +
Sbjct: 250 MEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGT 309
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPN--TQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
F + +L ++ +L+ M+ G PN +C+ + CK +E A+ L ++M
Sbjct: 310 LVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCL-IHGHCKSGNMLE-AVGLLSEMES 367
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQE 237
+ +L + LC ++ EA + F +M + PS ++ I + N ++
Sbjct: 368 LNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQ 427
Query: 238 ALQNLSNKMALFG--PSMI 254
AL +L ++M G P++I
Sbjct: 428 AL-DLCSEMTASGVEPNII 445
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 90/211 (42%), Gaps = 2/211 (0%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
REM PD + +++ + R+ + + + M + PDV Y + G
Sbjct: 156 REMKCSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLY 215
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
K +L EM G P+ Y I + C ++ +A + + M + G+ PN TY+
Sbjct: 216 SKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAM 275
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKG 180
+ + ++R ++ LY ++ LPN LV CK +E V A L+ MV+ G
Sbjct: 276 IDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVT-ARSLFVHMVKFG 334
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEM 211
+ V + L C G ++EA EM
Sbjct: 335 VDPNLYVYNCLIHGHCKSGNMLEAVGLLSEM 365
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 73/170 (42%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ PD+V+Y LID + K+ +++A ++ M + I P+ ++ ++ G G+ A
Sbjct: 474 GIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVA 533
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
D +E + + + I C + AS +M G++P+ +Y +
Sbjct: 534 IDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKG 593
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWN 174
+ + L C M+ TG LPN L + + V+ A L N
Sbjct: 594 HLQEKRITDTMMLQCDMIKTGILPNLLVNQLLARFYQANGYVKSACFLTN 643
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 63/129 (48%), Gaps = 1/129 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+ P+ ++ CL+D + K+ ++ A ++ + + + +T +I GL G
Sbjct: 505 MLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGY 564
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A +M+ G PD +Y + ++ + KR+ D L +M++ G+ PN L
Sbjct: 565 ILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQL 624
Query: 121 FFRVFYWSN 129
R FY +N
Sbjct: 625 LAR-FYQAN 632
>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
Length = 1010
Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 112/242 (46%), Gaps = 19/242 (7%)
Query: 1 MREM---GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGL 57
+REM G PD +Y+ +I + C +V+ A+ + E+M+ + PDV +YT +I
Sbjct: 468 IREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCK 527
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
VG +AR EM GC P+ Y A I Y A+++ A+ L + M+ +G PN T
Sbjct: 528 VGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVT 587
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCL----------------PNTQSCMFLVKLCK 161
Y S + + +Y RM G + PN + LV
Sbjct: 588 YTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLC 647
Query: 162 RQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQV 221
+ KV+ A L + M +G +V D L D C +GKL EA+ F +M E+G+ P+
Sbjct: 648 KAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVY 707
Query: 222 SF 223
++
Sbjct: 708 TY 709
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 122/271 (45%), Gaps = 18/271 (6%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G P++V+Y LI Y K R++ A ++ E M E P+V++YT++I G GQ +KA
Sbjct: 545 GCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKA 604
Query: 65 RDVLKEMKEYGCYPDAA----------------AYNAAIRNYCIAKRLRDASGLMDEMVE 108
+ M+ PD Y A + C A ++++A L+D M
Sbjct: 605 CQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSV 664
Query: 109 KGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEI 168
+G PN Y+ F L + ++ +M G PN + L+ + +++++
Sbjct: 665 EGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDL 724
Query: 169 ALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKA 228
AL++ + M+E +++ + D LC +GK EA + M EKG P+ V++ +
Sbjct: 725 ALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMID 784
Query: 229 LMELANKQEALQNLSNKMALFG--PSMIPKR 257
A K + L +M G P+ + R
Sbjct: 785 GFGKAGKVDKCLELMRQMGAKGCAPNFVTYR 815
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 111/277 (40%), Gaps = 51/277 (18%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMR-DEDI---------------SPD 44
M G P++V+Y LID +CK Q+EKA +I +MR + DI P+
Sbjct: 576 MLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPN 635
Query: 45 VISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMD 104
+ +Y +++ GL + +ARD+L M GC P+ Y+A I +C +L +A +
Sbjct: 636 IFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFT 695
Query: 105 EMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGT-------------------- 144
+M E+G PN TY+ + L + + RM+
Sbjct: 696 KMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVG 755
Query: 145 ---------------GCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSD 189
GC PN + ++ + KV+ L+L M KG +
Sbjct: 756 KTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYR 815
Query: 190 VLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
VL + C G L +A + EM + +R++
Sbjct: 816 VLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKV 852
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 92/215 (42%), Gaps = 35/215 (16%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E P+++ Y +ID CK + ++AY+++ M ++ P+V++YT++I G G G+
Sbjct: 732 MLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGK 791
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDAS-------------------- 100
DK +++++M GC P+ Y I + C A L DA
Sbjct: 792 VDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRK 851
Query: 101 -------------GLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCL 147
GL+DE+ E P Y + F + L + L+ M
Sbjct: 852 VIEGFNREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKXMSSCTSY 911
Query: 148 PNTQSCMF--LVKLCKRQEKVEIALQLWNDMVEKG 180
++ L++ KV+ A +L+ DM+++G
Sbjct: 912 SAADKDLYSSLIESLSLASKVDKAFELYADMIKRG 946
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 107/268 (39%), Gaps = 8/268 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR P++V+Y L+ + RQ+ + +I+ M E P + S+I G
Sbjct: 325 MRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGD 384
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRD------ASGLMDEMVEKGLSPN 114
A +LK+M + GC P YN I C ++L A EM++ + N
Sbjct: 385 YSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLN 444
Query: 115 ATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWN 174
+ R + ++++ MM G +P+T + ++ L KV+ A L+
Sbjct: 445 KVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFE 504
Query: 175 DMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELAN 234
+M + +L D C +G L +A K F EM+ G P+ V++ + A
Sbjct: 505 EMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKAR 564
Query: 235 KQEALQNLSNKMALFGPSMIPKREEYLA 262
K + L M IP Y A
Sbjct: 565 KMSSANELFEMM--LSEGCIPNVVTYTA 590
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 99/217 (45%), Gaps = 6/217 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQV------EKAYKIVEKMRDEDISPDVISYTSIIGG 54
M + G +P V YN LI C + ++ E A K +M D + + ++ +++
Sbjct: 395 MGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARC 454
Query: 55 LGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPN 114
L G+ +KA +++EM G PD + Y+ I C A ++ +A L +EM + P+
Sbjct: 455 LCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPD 514
Query: 115 ATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWN 174
TY + F L+ + + M+ GC PN + L+ + K+ A +L+
Sbjct: 515 VFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFE 574
Query: 175 DMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEM 211
M+ +G ++ L D C G++ +A + + M
Sbjct: 575 MMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARM 611
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 108/246 (43%), Gaps = 19/246 (7%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G D + C + + CK + +A ++EK E+ D + YT +I GL
Sbjct: 258 MSDSGFNMDGYTLGCFVHLLCKAGRWREALALIEK---EEFKLDTVIYTQMISGLCEASL 314
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKR-LRDASGLMDEMVEKGLSPNATTYN 119
++A D L M+ C P+ Y + C+ KR L ++ M+ +G P+ +N
Sbjct: 315 FEEAMDFLSRMRSSSCIPNVVTYRILLCG-CLRKRQLGRCKRILSMMITEGCYPSRRIFN 373
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEK------VEIALQLW 173
+ S D ++ L +M GC P L+ EK +E+A + +
Sbjct: 374 SLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAY 433
Query: 174 NDMVEKGFGSYILVSDV----LFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKAL 229
+M++ ++++++ V L LC GK +A EM+ KG P ++ ++ L
Sbjct: 434 GEMLD----AHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGL 489
Query: 230 MELANK 235
+ A+K
Sbjct: 490 LCNASK 495
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 74/193 (38%), Gaps = 35/193 (18%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G P++V+Y +ID + K +V+K +++ +M + +P+ ++Y +I G
Sbjct: 767 MEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGL 826
Query: 61 PDKARDVLKEMK---------------------------------EYGCYPDAAAYNAAI 87
D A +L EMK E P AY I
Sbjct: 827 LDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLGLLDEIAENVAVPIIPAYRILI 886
Query: 88 RNYCIAKRLRDASGLMDEM--VEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
++C A RL A L M + + Y+ ++ + ++ LY M+ G
Sbjct: 887 DSFCKAGRLELALELHKXMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRG 946
Query: 146 CLPNTQSCMFLVK 158
+P +LVK
Sbjct: 947 GIPELSIFFYLVK 959
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 41/210 (19%), Positives = 85/210 (40%), Gaps = 3/210 (1%)
Query: 14 NCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKE 73
N LI C++ A + + +++D P ++Y +++ + D A V +EM +
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSD 260
Query: 74 YGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRS 133
G D + C A R R+A L++ ++ + Y ++
Sbjct: 261 SGFNMDGYTLGCFVHLLCKAGRWREALALIE---KEEFKLDTVIYTQMISGLCEASLFEE 317
Query: 134 SWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFD 193
+ + RM + C+PN + L+ C R+ ++ ++ + M+ +G + + L
Sbjct: 318 AMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIH 377
Query: 194 LLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
C G A K +M + G +P V +
Sbjct: 378 AYCRSGDYSYAYKLLKKMGDCGCQPGYVVY 407
>gi|358347154|ref|XP_003637626.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503561|gb|AES84764.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 989
Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 115/243 (47%), Gaps = 34/243 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ PDIV+Y LID Y K+ A IV++M++++I DV++Y ++I GL +G+
Sbjct: 592 MYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGK 651
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D R V M E G PD YN I YCI + DA +++EM G+ PNA TYN+
Sbjct: 652 YD-PRYVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNI 710
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQL-------- 172
L + TG +P + FLVK R EK + LQ+
Sbjct: 711 ----------------LIGGLCKTGFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASG 754
Query: 173 ---------WNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++MV++G + ++ + L C + +A K++ +M G P+ ++
Sbjct: 755 LELKRQKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTY 814
Query: 224 RRI 226
+
Sbjct: 815 NTL 817
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 118/315 (37%), Gaps = 88/315 (27%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGL---GL 57
M E+G+ PD ++YN +I+ YC + E A I+ +M+ I P+ ++Y +IGGL G
Sbjct: 661 MIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGF 720
Query: 58 VGQP---------------------------------DKARDVLKEMKEYGCYPDAAAYN 84
V P + + VL EM + G D YN
Sbjct: 721 VPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELKRQKVVLDEMVKRGISADLVTYN 780
Query: 85 AAIRNYCIAKRLRDA---------------------------------------SGLMDE 105
A IR YC + A L+ E
Sbjct: 781 ALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSE 840
Query: 106 MVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEK 165
M E+GL PNA TY++ + + + + L+ M+ G +P ++ L+ + K
Sbjct: 841 MNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGK 900
Query: 166 VEIALQLWNDMVEKGFGSYILVSDVL------------FDLLCDMGKLVEAEKSFLEMIE 213
+ A +L ND++ KG D+L D +E +K +EM
Sbjct: 901 MIEARELLNDLLTKGRIPNSFTYDILTCGWLNLSYEPEIDRSLKRSYEIEVKKLLIEMGR 960
Query: 214 KGHKPS-QVSFRRIK 227
KG K S + RR+K
Sbjct: 961 KGLKFSKKAEIRRLK 975
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 110/223 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M EMG+ P+ VSY +I+ K +V +A+ + +M IS D+++ T+++ GL VG+
Sbjct: 382 MYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGK 441
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A +V + + + P+ Y+A + YC ++ A ++ +M ++ + PN T++
Sbjct: 442 TKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSS 501
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L + ++ M+ +PNT L+ + + ++A +M +
Sbjct: 502 IINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRR 561
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ D+L + L +G++ EA ++M KG P V++
Sbjct: 562 LEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNY 604
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 110/248 (44%), Gaps = 1/248 (0%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
++ + P+ V+Y+ L+D YCK ++E A +++KM E + P+VI+++SII G G
Sbjct: 454 KLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLS 513
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
KA DVL+EM + P+ Y I Y A A EM + L + +++
Sbjct: 514 KAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILL 573
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
+ + +L M G P+ + L+ ++ AL + +M EK
Sbjct: 574 NNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIR 633
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNL 242
++ + L L +GK + MIE G P +++ I + K E ++
Sbjct: 634 FDVVAYNALIKGLLRLGKY-DPRYVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDI 692
Query: 243 SNKMALFG 250
N+M +G
Sbjct: 693 LNEMKSYG 700
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 107/235 (45%), Gaps = 20/235 (8%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKM----RDED---------------ISPDVI 46
VK DIV+YN L+ +CK + +A + ++ +DED + P ++
Sbjct: 263 VKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLV 322
Query: 47 SYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEM 106
+YT++I +++ + K+M G PD ++ + +C +L +A+ L EM
Sbjct: 323 TYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREM 382
Query: 107 VEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKV 166
E GL PN +Y + S + ++NL +M+ G + +C ++ + K
Sbjct: 383 YEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKT 442
Query: 167 EIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQV 221
+ A +++ +++ + L D C +GK+ E + L+ +EK H P V
Sbjct: 443 KEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKM-ELAELVLQKMEKEHVPPNV 496
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 97/238 (40%), Gaps = 19/238 (7%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV D++ N LID YC+ + +A +++E D+ D+++Y +++ G +A
Sbjct: 227 GVTKDVIGLNTLIDGYCEAVLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRA 286
Query: 65 RDVLKEMKEY-------------------GCYPDAAAYNAAIRNYCIAKRLRDASGLMDE 105
+ E+ + P Y I YC + ++ L +
Sbjct: 287 ESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKK 346
Query: 106 MVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEK 165
M+ G+ P+ T + F L + L+ M G PN S ++ + +
Sbjct: 347 MIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGR 406
Query: 166 VEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
V A L + MV +G I+ + D L +GK EAE+ F +++ P+ V++
Sbjct: 407 VMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTY 464
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 109/267 (40%), Gaps = 21/267 (7%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
V D V+YN +I +C+ V++ + ++ +M + D I+ ++ G +G A
Sbjct: 158 VDIDNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAE 217
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
V+ + + G D N I YC A + A+ L++ + + TYN + F
Sbjct: 218 WVMYNLVDGGVTKDVIGLNTLIDGYCEAVLMSQATELIENSWRSDVKIDIVTYNTLLKAF 277
Query: 126 YWSNDLRSSWNLYCRMMG-------------------TGCLPNTQSCMFLVKLCKRQEKV 166
+ DL + +L+ ++G P + L+ + V
Sbjct: 278 CKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGV 337
Query: 167 EIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR- 225
E + L+ M+ G ++ + C GKL EA F EM E G P+ VS+
Sbjct: 338 EESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATI 397
Query: 226 IKALMELANKQEALQNLSNKMALFGPS 252
I +L + EA NL ++M + G S
Sbjct: 398 INSLFKSGRVMEAF-NLQSQMVVRGIS 423
>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
Length = 468
Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 111/229 (48%), Gaps = 2/229 (0%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
RE V+PD +YN LI C E A K++ +MRD++I+ +V +Y+SII L +P
Sbjct: 73 REKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKP 132
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
+++ VL+EM GC PD A+N ++ + + + A + MVE G P+ +Y++
Sbjct: 133 EESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHIL 192
Query: 122 FRVFYWSNDLRSSWNLYCRMM--GTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
L S + M G +PN + L+ R ++E AL+++ M+E
Sbjct: 193 IHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEA 252
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKA 228
G L LC K+++A + F +M + P V++ + A
Sbjct: 253 GCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIA 301
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 110/229 (48%), Gaps = 3/229 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ + ++ +Y+ +I K+ + E++YK++E+M +PDV ++ ++ G
Sbjct: 107 MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 166
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEK--GLSPNATTY 118
+KAR+V + M E G PD +Y+ I +L ++ ++ EM + G PN T+
Sbjct: 167 MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITF 226
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
+ + +L + ++ M+ GC PN + L+ R EKV A +L+ M +
Sbjct: 227 STLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQ 286
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMI-EKGHKPSQVSFRRI 226
+ + L C G + EAEK + EM G +P+ V+F +
Sbjct: 287 ACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTL 335
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 119/243 (48%), Gaps = 8/243 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G P++++++ LI C+ ++EKA ++ M + P+ +YT++I GL +
Sbjct: 214 MRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEK 273
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMV-EKGLSPNATTYN 119
+AR++ ++M + PDA AYN+ I YC + +A L EM GL P T+N
Sbjct: 274 VIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFN 333
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
F L + L M G +T + L+ R K++ AL+++ M EK
Sbjct: 334 TLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREK 393
Query: 180 GFGSYIL--VSDVLF-DLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI-KALMELANK 235
F +L VS V F LC G + +A F + G P+ +FR + ++L++L
Sbjct: 394 KF---LLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRV 450
Query: 236 QEA 238
++A
Sbjct: 451 EDA 453
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 99/246 (40%), Gaps = 38/246 (15%)
Query: 12 SYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEM 71
+Y+ ++ K + +A ++ E M+ E P +++Y +I G+ KA D+ + M
Sbjct: 12 AYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSM 71
Query: 72 K-EYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSND 130
K E PD YN I C + A L+ EM +K ++ N TY+ +
Sbjct: 72 KREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAK 131
Query: 131 LRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDV 190
S+ + MM GC P+ + +++ R +E A +++ MVE
Sbjct: 132 PEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVES----------- 180
Query: 191 LFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEALQNLSNKMALF 249
G+KP VS+ I L ++ E+L+ LS +MA+
Sbjct: 181 ------------------------GYKPDNVSYHILIHGLAKIGKLDESLKILS-EMAMR 215
Query: 250 GPSMIP 255
+P
Sbjct: 216 AAGYVP 221
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Query: 3 EMGVK---PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVG 59
EMG K D +Y LI + ++++A ++ ++MR++ D +S S +GGL G
Sbjct: 354 EMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTG 413
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMD 104
D+A V + ++ G P+ + + R+ DA LM+
Sbjct: 414 NIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLME 458
>gi|388513011|gb|AFK44567.1| unknown [Medicago truncatula]
Length = 348
Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 102/206 (49%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+KPD ++N L+D +CKDR++++ + M + I PDV++Y S++ G LV + + A+
Sbjct: 143 IKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLVDGYRLVKEVNTAK 202
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+ M + G PD +YN I +C K++ A L +EM K + PN TYN
Sbjct: 203 SIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGL 262
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
S + + L +M G PN + ++ + +V+ A+ L ++G +
Sbjct: 263 SKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSM 322
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEM 211
+L D LC G+L +A F ++
Sbjct: 323 YTYTILIDGLCKGGRLKDARNIFEDL 348
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 116/221 (52%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
V+ + V YN +I CKD+ V A+ + +M + ISP+V++Y+++I G +VG+ A
Sbjct: 73 VQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAI 132
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
D+ ++ PD +N + +C +++++ + M+++G+ P+ TYN +
Sbjct: 133 DLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLVDGY 192
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
++ ++ +++ M G P+ +S L+ + +KV+ A+ L+N+M K +
Sbjct: 193 RLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNV 252
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + L D L G++ A + +M ++G P+ +++ I
Sbjct: 253 VTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSI 293
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 110/258 (42%), Gaps = 35/258 (13%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
MG P+ ++ N LI C Q+ +A+ +K+ D +SY ++I GL VG+
Sbjct: 1 MGYHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRA 60
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
A D+L+ + +A YN I C K + DA L EMV KG+SPN TY+
Sbjct: 61 ALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALIS 120
Query: 124 VFYWSNDLRSSWNL----------------------YCR-------------MMGTGCLP 148
F+ L+ + +L +C+ MM G +P
Sbjct: 121 GFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIP 180
Query: 149 NTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSF 208
+ + LV + ++V A ++N M + G I ++L + C + K+ +A F
Sbjct: 181 DVVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLF 240
Query: 209 LEMIEKGHKPSQVSFRRI 226
EM K P+ V++ +
Sbjct: 241 NEMHCKNIIPNVVTYNSL 258
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 80/162 (49%), Gaps = 1/162 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ PD+V+YN L+D Y ++V A I M ++PD+ SY +I G + +
Sbjct: 173 MMKQGIIPDVVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKK 232
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA ++ EM P+ YN+ I + R+ A L+D+M ++G+ PN TYN
Sbjct: 233 VDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNS 292
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCK 161
+ ++ + + L + G P+ + L+ LCK
Sbjct: 293 IIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCK 334
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 75/138 (54%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV PDI SYN LI+ +CK ++V+KA + +M ++I P+V++Y S+I GL G+
Sbjct: 208 MAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGR 267
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A ++ +M + G P+ YN+ I ++ A L+ + ++G+ P+ TY +
Sbjct: 268 ISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTI 327
Query: 121 FFRVFYWSNDLRSSWNLY 138
L+ + N++
Sbjct: 328 LIDGLCKGGRLKDARNIF 345
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 45/71 (63%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV P+I++YN +ID K QV+KA ++ K +D+ I P + +YT +I GL G+
Sbjct: 278 MHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKGGR 337
Query: 61 PDKARDVLKEM 71
AR++ +++
Sbjct: 338 LKDARNIFEDL 348
>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 707
Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 115/226 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ + PD+VSYN +I +C+ +++EKA ++ +M+ S ++++ +I G+
Sbjct: 168 MRQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGK 227
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A +LKEMK G D Y + IR +C L L DE++E+G SP A TYN
Sbjct: 228 MDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNT 287
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
R F L+ + ++ MM G PN + L+ K + ALQL N M++K
Sbjct: 288 LIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKD 347
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ +++ + LC + +A + M ++ +P +++ +
Sbjct: 348 EEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSL 393
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 103/219 (47%), Gaps = 2/219 (0%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
+P++V+YN +I+ CKD V A +IVE M+ PD I+Y S++GGL G D+A
Sbjct: 349 EPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASK 408
Query: 67 VLKEMKEYGCY--PDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+L M + Y PD ++NA I C RL A + D +VEK + + T N+
Sbjct: 409 LLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNS 468
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
S D+ + L+ ++ + +PN+ + ++ + + +A L M
Sbjct: 469 TLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPS 528
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + L LC G L +A + F EM P +SF
Sbjct: 529 VFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISF 567
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 115/245 (46%), Gaps = 3/245 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E + VS + L++ + + R+ A+ ++ M + +V +Y ++ GL +
Sbjct: 98 MLETDTFINFVSLSGLLECFVQMRKTGFAHGVLALMLKRGFAFNVYNYNILLKGLCRNLE 157
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA +L+EM++ PD +YN IR +C K L A L +EM G S + T+ +
Sbjct: 158 FGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGI 217
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
F + + + L M G + L++ C E ++ L+++++E+
Sbjct: 218 LIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGE-LDRGKALFDEVLER 276
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEA 238
G + + L C +G+L EA + F M+E+G +P+ ++ I L + +EA
Sbjct: 277 GDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEA 336
Query: 239 LQNLS 243
LQ L+
Sbjct: 337 LQLLN 341
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 99/226 (43%), Gaps = 1/226 (0%)
Query: 14 NCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKE 73
N L+ + R E A+ KM + D + +S + ++ + + A VL M +
Sbjct: 76 NNLMATLVRSRNHEVAFSFYRKMLETDTFINFVSLSGLLECFVQMRKTGFAHGVLALMLK 135
Query: 74 YGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRS 133
G + YN ++ C A L+ EM + L P+ +YN R F +L
Sbjct: 136 RGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEK 195
Query: 134 SWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFD 193
+ L M G+GC + + L+ + K++ A+ L +M KG + ++V L
Sbjct: 196 ALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIR 255
Query: 194 LLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEA 238
CD G+L + F E++E+G P +++ I+ +L +EA
Sbjct: 256 GFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEA 301
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 82/174 (47%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ P+ +Y +ID +CK + A ++ KMR ++ P V Y ++ L G D+A
Sbjct: 490 IVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAW 549
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+ +EM+ +PD ++N I A ++ A L+ M GLSP+ TY+ F
Sbjct: 550 RLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKLINRF 609
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
L + + + +M+ +G P+ C ++K C Q + + + +V+K
Sbjct: 610 LKLGYLDEAISFFDKMIDSGFEPDAHICDSVLKYCISQGETDKLTEFVKKLVDK 663
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 89/211 (42%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD++S+N LI CK ++ +A I + + ++ + D+++ ++ G +KA ++
Sbjct: 422 PDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMEL 481
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
K++ P++ Y I +C L A GL+ +M L P+ YN
Sbjct: 482 WKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCK 541
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
L +W L+ M P+ S ++ + ++ A L M G +
Sbjct: 542 KGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFT 601
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
L + +G L EA F +MI+ G +P
Sbjct: 602 YSKLINRFLKLGYLDEAISFFDKMIDSGFEP 632
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 58/115 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR + P + YNCL+ CK +++A+++ E+M+ +D PDVIS+ +I G G
Sbjct: 520 MRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGD 579
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNA 115
A +L M G PD Y+ I + L +A D+M++ G P+A
Sbjct: 580 IKSAESLLVGMSHAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMIDSGFEPDA 634
>gi|224099199|ref|XP_002311400.1| predicted protein [Populus trichocarpa]
gi|222851220|gb|EEE88767.1| predicted protein [Populus trichocarpa]
Length = 548
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 75/235 (31%), Positives = 116/235 (49%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
D+ SYN LID +CK + KA + + M+D +SP+++++ ++I G G+ KAR++L
Sbjct: 298 DVFSYNMLIDCFCKANVMNKAVMVFKVMQDRGVSPNLVTFNTLISGHCKDGEVHKARELL 357
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
+ + E G PD +++ I C A++ DA G EMVE G+SPNA TYN+ R
Sbjct: 358 QMLLELGLKPDIFTFSSIIDCLCRAQQFDDALGCFSEMVEWGISPNAVTYNILIRSLCLI 417
Query: 129 NDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVS 188
D+ S L M G P+ S L++ R KVE A +++ M G
Sbjct: 418 GDVGRSMKLLKDMRKDGISPDIFSFNALIQSFCRMGKVEKAEKMFVSMSTLGLIPNNYTY 477
Query: 189 DVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLS 243
L L ++G+ EA+K F M G P + I + E LQN++
Sbjct: 478 GALVKALFELGRCDEAKKMFFSMEVNGCVPDSFTCNLISENLFKQGDFEELQNIA 532
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 87/158 (55%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ GV P++V++N LI +CKD +V KA ++++ + + + PD+ +++SII L Q
Sbjct: 325 MQDRGVSPNLVTFNTLISGHCKDGEVHKARELLQMLLELGLKPDIFTFSSIIDCLCRAQQ 384
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A EM E+G P+A YN IR+ C+ + + L+ +M + G+SP+ ++N
Sbjct: 385 FDDALGCFSEMVEWGISPNAVTYNILIRSLCLIGDVGRSMKLLKDMRKDGISPDIFSFNA 444
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK 158
+ F + + ++ M G +PN + LVK
Sbjct: 445 LIQSFCRMGKVEKAEKMFVSMSTLGLIPNNYTYGALVK 482
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 64/137 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+ P+ V+YN LI C V ++ K+++ MR + ISPD+ S+ ++I +G+
Sbjct: 395 MVEWGISPNAVTYNILIRSLCLIGDVGRSMKLLKDMRKDGISPDIFSFNALIQSFCRMGK 454
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA + M G P+ Y A ++ R +A + M G P++ T NL
Sbjct: 455 VEKAEKMFVSMSTLGLIPNNYTYGALVKALFELGRCDEAKKMFFSMEVNGCVPDSFTCNL 514
Query: 121 FFRVFYWSNDLRSSWNL 137
+ D N+
Sbjct: 515 ISENLFKQGDFEELQNI 531
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 65/123 (52%), Gaps = 1/123 (0%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
+G+ P YN +ID K ++ AY ++M ++ PD +Y +I G+ +G D+
Sbjct: 48 LGITPSTRLYNAVIDALVKSNSLDLAYLKFQQMSADNCKPDRFTYNMLIHGVCKIGVVDE 107
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPN-ATTYNLFF 122
A ++K+M+ +G + Y I +C AKR+ +A + + M + ++PN AT +L
Sbjct: 108 ALRLVKQMEGFGYSANVYTYTNLIYGFCNAKRVDEAFRVFETMKLRNVNPNEATIRSLVH 167
Query: 123 RVF 125
VF
Sbjct: 168 GVF 170
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 104/255 (40%), Gaps = 35/255 (13%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
KPD +YN LI CK V++A ++V++M S +V +YT++I G + D+A
Sbjct: 86 KPDRFTYNMLIHGVCKIGVVDEALRLVKQMEGFGYSANVYTYTNLIYGFCNAKRVDEAFR 145
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNY--CIAKR----------------------------- 95
V + MK P+ A + + C+A R
Sbjct: 146 VFETMKLRNVNPNEATIRSLVHGVFRCVAPREAFELVIDFIEKEPVLGRLACDTLLCCLS 205
Query: 96 ----LRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQ 151
R+A L+ ++ E+G P+++T+N+ D+ + + + + G
Sbjct: 206 EKCMPREAGALLRKLGERGYLPDSSTFNITMTCLLKGLDVNETCGILDKFIARGAKLGFS 265
Query: 152 SCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEM 211
+ L++ + + + N MV+ S + ++L D C + +A F M
Sbjct: 266 FYLALIETLYKAGRGMEGDRYLNQMVKDRLVSDVFSYNMLIDCFCKANVMNKAVMVFKVM 325
Query: 212 IEKGHKPSQVSFRRI 226
++G P+ V+F +
Sbjct: 326 QDRGVSPNLVTFNTL 340
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 103/274 (37%), Gaps = 36/274 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+ E G PD ++N + K V + I++K Y ++I L G+
Sbjct: 220 LGERGYLPDSSTFNITMTCLLKGLDVNETCGILDKFIARGAKLGFSFYLALIETLYKAGR 279
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ L +M + D +YN I +C A + A + M ++G+SPN T+N
Sbjct: 280 GMEGDRYLNQMVKDRLVSDVFSYNMLIDCFCKANVMNKAVMVFKVMQDRGVSPNLVTFNT 339
Query: 121 FFR--------------------------VFYWSN---------DLRSSWNLYCRMMGTG 145
+F +S+ + + M+ G
Sbjct: 340 LISGHCKDGEVHKARELLQMLLELGLKPDIFTFSSIIDCLCRAQQFDDALGCFSEMVEWG 399
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
PN + L++ V +++L DM + G I + L C MGK+ +AE
Sbjct: 400 ISPNAVTYNILIRSLCLIGDVGRSMKLLKDMRKDGISPDIFSFNALIQSFCRMGKVEKAE 459
Query: 206 KSFLEMIEKGHKPSQVSFRR-IKALMELANKQEA 238
K F+ M G P+ ++ +KAL EL EA
Sbjct: 460 KMFVSMSTLGLIPNNYTYGALVKALFELGRCDEA 493
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 69/183 (37%)
Query: 41 ISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDAS 100
I+P Y ++I L D A ++M C PD YN I C + +A
Sbjct: 50 ITPSTRLYNAVIDALVKSNSLDLAYLKFQQMSADNCKPDRFTYNMLIHGVCKIGVVDEAL 109
Query: 101 GLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLC 160
L+ +M G S N TY F + + ++ ++ M PN + LV
Sbjct: 110 RLVKQMEGFGYSANVYTYTNLIYGFCNAKRVDEAFRVFETMKLRNVNPNEATIRSLVHGV 169
Query: 161 KRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQ 220
R A +L D +EK L D L L + EA ++ E+G+ P
Sbjct: 170 FRCVAPREAFELVIDFIEKEPVLGRLACDTLLCCLSEKCMPREAGALLRKLGERGYLPDS 229
Query: 221 VSF 223
+F
Sbjct: 230 STF 232
>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
Length = 814
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 116/223 (52%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ PD+V+YN ++ CK R ++KA + +M ++ + P+ +Y ++I G GQ
Sbjct: 245 MVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQ 304
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A V KEM+ + PD + + + C ++++A + D M KG +P+ +YN+
Sbjct: 305 WKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNI 364
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L +L+ M+G G P+ + L+K ++ A+ ++N+M + G
Sbjct: 365 MLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHG 424
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + LC +GK+ +A + F +MI++G P + ++
Sbjct: 425 VKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAY 467
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 109/216 (50%), Gaps = 2/216 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ GVKPD+V+Y +I C+ +++ A + +M D+ ++PD +Y +I G G
Sbjct: 420 MRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGS 479
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA++++ E+ G + D +++ I N C R+ DA + D V GL P+A Y++
Sbjct: 480 LLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSM 539
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ + + ++ M+ G PN C + CK +++ L L+ +M+++
Sbjct: 540 LMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCK-IGRIDEGLSLFREMLQR 598
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
G ++ ++ D L G+ V A+ F EM E G
Sbjct: 599 GIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESG 634
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 108/222 (48%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ PD ++N LI Y ++KA I +MRD + PDV++Y ++I L +G+ D A
Sbjct: 389 GIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDA 448
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ +M + G PD AYN I+ +C L A L+ E++ G+ + ++
Sbjct: 449 MEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINN 508
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + N++ + G P+ L+ K+E AL++++ MV G
Sbjct: 509 LCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPN 568
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++V L + C +G++ E F EM+++G KPS + + I
Sbjct: 569 VVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSII 610
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 105/224 (46%), Gaps = 4/224 (1%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDI--SPDVISYTSIIGGLGLVGQ 60
E+G PD+ SY+ L+ C + +A ++ M + SP+V++Y ++I G G
Sbjct: 175 ELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGD 234
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA D+ KEM + G PD YN+ + C A+ + A + +MV K + PN TYN
Sbjct: 235 VNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNN 294
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ + + + ++ M LP+ + M + LCK K++ A +++ M K
Sbjct: 295 LIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCK-YGKIKEARDVFDTMAMK 353
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G + +++ + G LV+ F M+ G P +F
Sbjct: 354 GQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTF 397
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 104/237 (43%), Gaps = 2/237 (0%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
+G+ PD V Y+ L+D YC ++EKA ++ + M I P+V+ Y +++ G +G+ D+
Sbjct: 528 VGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDE 587
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
+ +EM + G P Y+ I A R A EM E G++ + TYN+ R
Sbjct: 588 GLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLR 647
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
+ + + L+ + N + ++ + +VE A L+ +
Sbjct: 648 GLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVP 707
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
++ ++ L G + EAE F M G +P+ + + EL K E ++
Sbjct: 708 SVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHV--VRELLKKNEIVR 762
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 92/234 (39%), Gaps = 35/234 (14%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G++P++V Y L++ YCK ++++ + +M I P I Y+ II GL G+
Sbjct: 560 MVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGR 619
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIR----NYCI------------------------ 92
A+ EM E G D YN +R N C
Sbjct: 620 TVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNT 679
Query: 93 -------AKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
+R+ +A L + L P+ TY++ + + +++ M G
Sbjct: 680 MIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAG 739
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMG 199
C PN++ +V+ ++ ++ A + + E+ F L + +L DL G
Sbjct: 740 CEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKG 793
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/224 (19%), Positives = 83/224 (37%), Gaps = 38/224 (16%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ P +Y L+D + + E A ++ + ++I ++ G + D+A
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 166
Query: 66 DVL-KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGL--SPNATTYNLFF 122
D+L E GC PD +Y+ +++ C + A L+ M E G SPN YN
Sbjct: 167 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVI 226
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
F+ D V A L+ +MV++G
Sbjct: 227 DGFFKEGD-----------------------------------VNKACDLFKEMVQRGIP 251
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ + + LC + +AE +M+ K P+ ++ +
Sbjct: 252 PDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNL 295
>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Cucumis sativus]
Length = 581
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 102/216 (47%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD+ SYN +I + K Q++ A ++ ++MR SPDV++Y +IG L G+ + A +V
Sbjct: 129 PDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEV 188
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
+ E+ + GC P Y I + R+ +A L DE+V +GL P+ TYN R
Sbjct: 189 MDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICK 248
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ + + GC P+ S L++ + + E +L DMV G ++
Sbjct: 249 EGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVT 308
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+L C G++ EA M EKG P S+
Sbjct: 309 HSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSY 344
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 108/230 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G PD+V+YN +I C ++E A+++++++ + P VI+YT +I L G+
Sbjct: 157 MRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDELLKDGCKPSVITYTILIEATILEGR 216
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A ++ E+ G PD YNA IR C A + + +G +P+ +YN+
Sbjct: 217 INEALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNI 276
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
R F + L M+ +GC PN + L+ R+ +V A+ + M EKG
Sbjct: 277 LLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKG 336
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALM 230
D L C G+L A + +M+ G P V++ I A +
Sbjct: 337 LTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATL 386
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 118/240 (49%), Gaps = 1/240 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G KP +++Y LI+ + ++ +A ++ +++ + PD+ +Y +II G+ G D+A
Sbjct: 196 GCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRA 255
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
D ++ + GC PD +YN +R++ R D LM +MV G PN T+++
Sbjct: 256 LDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISS 315
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
F +R + N+ M G P++ S L+ ++ ++++A++ MV G
Sbjct: 316 FCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPD 375
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI-KALMELANKQEALQNLS 243
I+ + + LC G A F ++ E G P+ ++ + AL NK +AL+ +S
Sbjct: 376 IVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKALEMIS 435
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 114/246 (46%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G +P++V+++ LI +C++ +V +A ++E M+++ ++PD SY +I G+ D A
Sbjct: 301 GCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLA 360
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ L++M GC PD YN + C A + +++ E G P YN F
Sbjct: 361 IEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSA 420
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + + + M+ G P+ + L+ R V+ A+ L DM F
Sbjct: 421 LWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPT 480
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSN 244
++ +++ +C ++ E + + M+EKG P++ S+ + + A + L+N
Sbjct: 481 VISFNIVLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRAEAMELAN 540
Query: 245 KMALFG 250
+ G
Sbjct: 541 SLYRLG 546
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 87/181 (48%), Gaps = 2/181 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E G+ PD SY+ LI +CK+ +++ A + +EKM + PD+++Y +I+ L G
Sbjct: 332 MKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGC 391
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A DV +++ E GC P AYN A ++ EM+ KG+ P+ TYN
Sbjct: 392 ADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNS 451
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSC-MFLVKLCKRQEKVEIALQLWNDMVEK 179
+ + L M T P S + L+ +CK E ++L MVEK
Sbjct: 452 LISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVLLGMCKAHRVFE-GIELLITMVEK 510
Query: 180 G 180
G
Sbjct: 511 G 511
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 96/208 (46%), Gaps = 1/208 (0%)
Query: 16 LIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYG 75
L++ C+ + ++ +E + + PDV+ T +I G KA V++ ++ YG
Sbjct: 68 LLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVMEILETYG 127
Query: 76 CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSW 135
PD +YNA I + A ++ A+ + D M +G SP+ TYN+ L ++
Sbjct: 128 -DPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAF 186
Query: 136 NLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLL 195
+ ++ GC P+ + L++ + ++ AL+L++++V +G + + + +
Sbjct: 187 EVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGI 246
Query: 196 CDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
C G A + +G P VS+
Sbjct: 247 CKEGMEDRALDFVRHLSARGCNPDVVSY 274
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 60/122 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+ E+G P + +YN + KA +++ +M + I PD I+Y S+I L G
Sbjct: 402 LDEVGCPPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGL 461
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A +L +M+ P ++N + C A R+ + L+ MVEKG PN T+Y L
Sbjct: 462 VDEAIGLLVDMEATRFQPTVISFNIVLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVL 521
Query: 121 FF 122
Sbjct: 522 LI 523
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 52/111 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ PD ++YN LI C+D V++A ++ M P VIS+ ++ G+ +
Sbjct: 437 MIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVLLGMCKAHR 496
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGL 111
+ ++L M E GC P+ +Y I A +A L + + G+
Sbjct: 497 VFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRAEAMELANSLYRLGV 547
>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
Length = 816
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 115/224 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ PD+V+Y+ ++ CK R ++KA + +M ++ + PD +Y ++I G GQ
Sbjct: 247 MVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQ 306
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A V KEM+ PD A N + + C ++++A + D M KG +P+ +Y +
Sbjct: 307 WKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTI 366
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L +L+ M+G G P + L+K ++ A+ ++N+M + G
Sbjct: 367 MLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHG 426
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
+++ + LC +GK+ +A + F +MI++G P + ++
Sbjct: 427 VKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYH 470
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 106/215 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ GVKP +V+Y +I C+ +++ A + +M D+ + PD +Y +I G G
Sbjct: 422 MRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGS 481
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA++++ E+ G D + + I N C R+ DA + D V GL P+A YN+
Sbjct: 482 LLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNM 541
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + ++ M+ G PN LV + +++ L L+ +M++KG
Sbjct: 542 LMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKG 601
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
++ +++ D L + G+ V A+ F EM E G
Sbjct: 602 IKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESG 636
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 105/224 (46%), Gaps = 4/224 (1%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDI--SPDVISYTSIIGGLGLVGQ 60
E+G PD+ SYN L+ C + +A ++ M + SPDV++Y ++I G G
Sbjct: 177 ELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGD 236
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA D+ KEM + G PD Y++ + C A+ + A + +MV KG+ P+ TYN
Sbjct: 237 VNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNN 296
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEK 179
+ + + + ++ M LP+ + L+ LCK K++ A +++ M K
Sbjct: 297 LIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCK-YGKIKEARDVFDTMAMK 355
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G + ++ + G LV+ F M+ G P +F
Sbjct: 356 GQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTF 399
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 103/237 (43%), Gaps = 2/237 (0%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
+G+ PD V YN L+D YC ++EKA ++ + M I P+V+ Y +++ G +G+ D+
Sbjct: 530 VGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDE 589
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
+ +EM + G P YN I A R A EM E G++ N TY++ R
Sbjct: 590 GLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLR 649
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
+ + + L+ + + + ++ + +VE A L+ + G
Sbjct: 650 GLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVP 709
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ ++ L G + EAE F M G +P + + EL K E ++
Sbjct: 710 CAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHV--VRELLKKNEIVR 764
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 107/259 (41%), Gaps = 37/259 (14%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGL--- 57
MR + PD+V+ N L+ CK ++++A + + M + +PDV SYT ++ G
Sbjct: 317 MRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGC 376
Query: 58 --------------------------------VGQPDKARDVLKEMKEYGCYPDAAAYNA 85
G DKA + EM+++G P Y
Sbjct: 377 LVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMT 436
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
I C ++ DA ++M+++G+ P+ Y+ + F L + L +M G
Sbjct: 437 VIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNG 496
Query: 146 C-LPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEA 204
L + LCK +V A +++ V G +V ++L D C +GK+ +A
Sbjct: 497 MRLDIVFFGSIINNLCKLG-RVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKA 555
Query: 205 EKSFLEMIEKGHKPSQVSF 223
+ F M+ G +P+ V +
Sbjct: 556 LRVFDAMVSAGIEPNVVGY 574
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 94/235 (40%), Gaps = 37/235 (15%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G++P++V Y L++ YCK ++++ + +M + I P I Y II GL G+
Sbjct: 562 MVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGR 621
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIR----NYCI------------------------ 92
A+ EM E G + Y+ +R N C
Sbjct: 622 TVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNT 681
Query: 93 -------AKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
+R+ +A L + GL P A TY++ + + +++ M G
Sbjct: 682 MIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAG 741
Query: 146 CLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMG 199
C P+++ +V+ L K+ E V L + + E+ F L + +L DL G
Sbjct: 742 CEPDSRLLNHVVRELLKKNEIVRAGAYL-SKIDERNFSLEHLTAMLLVDLFSSKG 795
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 100/256 (39%), Gaps = 38/256 (14%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ P +Y L+D + + E A ++ + D I + ++ G + D+A
Sbjct: 109 LSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEAL 168
Query: 66 DV-LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGL--SPNATTYNLFF 122
D+ L E GC PD +YN +++ C + A L+ M E G SP+ YN
Sbjct: 169 DILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVI 228
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQ--EKVEI----------- 168
F+ D+ + +L+ M+ G P+ + +V LCK + +K E
Sbjct: 229 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL 288
Query: 169 ---------------------ALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKS 207
A++++ +M + ++ + L LC GK+ EA
Sbjct: 289 PDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDV 348
Query: 208 FLEMIEKGHKPSQVSF 223
F M KG P S+
Sbjct: 349 FDTMAMKGQNPDVFSY 364
>gi|299471045|emb|CBN78905.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 755
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 104/203 (51%), Gaps = 3/203 (1%)
Query: 1 MREM---GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGL 57
+REM G+ PD++SY ID Y K+ Q E+A +++ +M + ++P+VI+Y S+I G
Sbjct: 553 LREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVITYNSVIKACGR 612
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
G+ +KA D+LKE+KE PD +YN AI R +A L+ EM +GL+P+ +
Sbjct: 613 GGEWEKALDLLKELKETAVAPDLMSYNLAISACGKRGRWEEALDLLREMPAEGLTPDVIS 672
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
Y R + + L M G P S ++ C + + E A+ L +M
Sbjct: 673 YTSAIRACNAEGEWEKALGLLNLMGAHGVSPTATSYSLAIEACGKGGRREEAVCLVREMA 732
Query: 178 EKGFGSYILVSDVLFDLLCDMGK 200
++G + + ++ + L D K
Sbjct: 733 QRGLSHRNISNSLIVEALGDDAK 755
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 104/226 (46%), Gaps = 3/226 (1%)
Query: 1 MREMG---VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGL 57
+REM V PD +SYN I + Q E+ ++ +M ++PD I+Y S+I G G
Sbjct: 203 LREMADREVVPDEISYNSAIKACGRGGQWERVIGLLREMPSVGLTPDAITYNSVITGCGK 262
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
GQ +A VL EM G P+ +YN AIR + R ++A ++ +M +G++P+ +
Sbjct: 263 EGQWKEALSVLTEMSAKGLTPETISYNMAIRACGRSGRWKEAVEVLRQMESQGVTPDVIS 322
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
Y+ + +S +L M G G PNT + C + + E A++L ++
Sbjct: 323 YDAAIKACGGGGQWETSVDLLDEMAGRGVAPNTIHFNSAIVACGKGGQWEKAVELLREVT 382
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G + G+ EA + EM K KP +S+
Sbjct: 383 ALGLTPDATSFNSAIAACTKSGRWKEALELLKEMPAKRLKPDAISY 428
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 107/239 (44%), Gaps = 1/239 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV P++ YN I+ Q E A ++ +M D ++ PD ISY S I G GQ ++
Sbjct: 175 GVSPNVFCYNSAIEACGSGDQWEIAVSLLREMADREVVPDEISYNSAIKACGRGGQWERV 234
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+L+EM G PDA YN+ I + ++A ++ EM KGL+P +YN+ R
Sbjct: 235 IGLLREMPSVGLTPDAITYNSVITGCGKEGQWKEALSVLTEMSAKGLTPETISYNMAIRA 294
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
S + + + +M G P+ S +K C + E ++ L ++M +G
Sbjct: 295 CGRSGRWKEAVEVLRQMESQGVTPDVISYDAAIKACGGGGQWETSVDLLDEMAGRGVAPN 354
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNL 242
+ + G+ +A + E+ G P SF I A + +EAL+ L
Sbjct: 355 TIHFNSAIVACGKGGQWEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALELL 413
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 118/253 (46%), Gaps = 2/253 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ P+++S N I + + ++ +++ +M + ++P+VI+Y S I G GQ
Sbjct: 451 MPTKGLTPNVISSNIAIRACGERGRWQEGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQ 510
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA D+L +MKE PD+ YN+AI R ++A L+ EM +GL+P+ +Y
Sbjct: 511 WEKALDLLAKMKELAMTPDSITYNSAIAACSKRGRWKEAVALLREMPGQGLTPDVISYTA 570
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + L +M G PN + ++K C R + E AL L ++ E
Sbjct: 571 AIDAYGKNGQWERAVELLRQMPTKGLTPNVITYNSVIKACGRGGEWEKALDLLKELKETA 630
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
++ ++ G+ EA EM +G P +S+ I+A ++AL
Sbjct: 631 VAPDLMSYNLAISACGKRGRWEEALDLLREMPAEGLTPDVISYTSAIRACNAEGEWEKAL 690
Query: 240 QNLSNKMALFGPS 252
L N M G S
Sbjct: 691 -GLLNLMGAHGVS 702
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 116/267 (43%), Gaps = 4/267 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV PD++SY+ I Q E + ++++M ++P+ I + S I G GQ
Sbjct: 311 MESQGVTPDVISYDAAIKACGGGGQWETSVDLLDEMAGRGVAPNTIHFNSAIVACGKGGQ 370
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA ++L+E+ G PDA ++N+AI + R ++A L+ EM K L P+A +YN
Sbjct: 371 WEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALELLKEMPAKRLKPDAISYNS 430
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L +M G PN S ++ C + + + L+L M +G
Sbjct: 431 AIEACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGLELLRQMPAQG 490
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
++ + G+ +A +M E P +++ I A + +EA+
Sbjct: 491 LTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAACSKRGRWKEAV 550
Query: 240 QNLSNKMALFGPSMIPKREEYLAEMSA 266
L + G + P Y A + A
Sbjct: 551 ALLRE---MPGQGLTPDVISYTAAIDA 574
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 103/223 (46%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
+G+ PD S+N I K + ++A +++++M + + PD ISY S I G GQ +
Sbjct: 384 LGLTPDATSFNSAIAACTKSGRWKEALELLKEMPAKRLKPDAISYNSAIEACGKGGQWEM 443
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
A ++ ++M G P+ + N AIR R ++ L+ +M +GL+PN TYN +
Sbjct: 444 ALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGLELLRQMPAQGLTPNVITYNSAIK 503
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
+ +L +M P++ + + C ++ + + A+ L +M +G
Sbjct: 504 TCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAACSKRGRWKEAVALLREMPGQGLTP 563
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ D G+ A + +M KG P+ +++ +
Sbjct: 564 DVISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVITYNSV 606
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 94/214 (43%), Gaps = 3/214 (1%)
Query: 12 SYNCLIDVYCKDRQVEKAYKIVEKMRD-EDISPDVISYTSIIGGLGLVGQPDKARDVLKE 70
SY I + Q EKA +++ ++ + E +SP+V Y S I G Q + A +L+E
Sbjct: 146 SYTTAITTCGRQGQWEKALELLREIPEQEGVSPNVFCYNSAIEACGSGDQWEIAVSLLRE 205
Query: 71 MKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSND 130
M + PD +YN+AI+ + GL+ EM GL+P+A TYN
Sbjct: 206 MADREVVPDEISYNSAIKACGRGGQWERVIGLLREMPSVGLTPDAITYNSVITGCGKEGQ 265
Query: 131 LRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDV 190
+ + ++ M G P T S ++ C R + + A+++ M +G ++ D
Sbjct: 266 WKEALSVLTEMSAKGLTPETISYNMAIRACGRSGRWKEAVEVLRQMESQGVTPDVISYDA 325
Query: 191 LFDLLCDMGKLVEAEKSFL-EMIEKGHKPSQVSF 223
C G E L EM +G P+ + F
Sbjct: 326 AIK-ACGGGGQWETSVDLLDEMAGRGVAPNTIHF 358
>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Vitis vinifera]
Length = 728
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 124/251 (49%), Gaps = 7/251 (2%)
Query: 1 MREMG---VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGL 57
+REMG V PDIVSYN LI+ CK +++++A ++ +M P+ ++ T+++ GL
Sbjct: 167 IREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCK 226
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
G+ D+A ++L+ MK+ G D Y I +C L L DEM+ KG+S N T
Sbjct: 227 DGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVT 286
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDM 176
Y+ + + + M G P+ + L+ LCK A+ L N M
Sbjct: 287 YSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATH-AMDLLNLM 345
Query: 177 VEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI-KALMELANK 235
VEKG + +VL LC G +++A K MIEKG K V++ + K L +
Sbjct: 346 VEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKV 405
Query: 236 QEALQNLSNKM 246
EAL+ L N M
Sbjct: 406 DEALK-LFNSM 415
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 119/244 (48%), Gaps = 12/244 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G D+V Y LI +C + +++ ++ ++M + IS +V++Y+ ++ GL +GQ
Sbjct: 240 MKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQ 299
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A VL M E+G +PD Y I C R A L++ MVEKG P+ TYN+
Sbjct: 300 WKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNV 359
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV--E 178
+ ++ + M+ G + + L+K + KV+ AL+L+N M E
Sbjct: 360 LLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNE 419
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR----------RIKA 228
+ ++L LC G+L +A K +M++KG + V++ +IK
Sbjct: 420 NCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKE 479
Query: 229 LMEL 232
MEL
Sbjct: 480 AMEL 483
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 104/230 (45%), Gaps = 2/230 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+ PD+V+Y LID CKD + A ++ M ++ P ++Y ++ GL G
Sbjct: 310 MAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGL 369
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMV--EKGLSPNATTY 118
A +L+ M E G D YN ++ C ++ +A L + M E L PN T+
Sbjct: 370 VIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTF 429
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
N+ L + ++ +M+ G N + L+ C + K++ A++LW +++
Sbjct: 430 NMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLD 489
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKA 228
GF +L D C M L A+ F EM G P+ + + A
Sbjct: 490 LGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMA 539
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 106/221 (47%), Gaps = 4/221 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G ++ N ++ C++ V +A ++ +M + +SPD++SY ++I GL + +A
Sbjct: 139 GFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEA 198
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+L EM+ GC+P++ + C R+ +A L++ M +KG + Y
Sbjct: 199 VGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISG 258
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPN--TQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
F + +L L+ M+G G N T SC+ + LC+ + E A + N M E G
Sbjct: 259 FCNNGNLDRGKELFDEMLGKGISANVVTYSCL-VHGLCRLGQWKE-ANTVLNAMAEHGIH 316
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ L D LC G+ A M+EKG +PS V++
Sbjct: 317 PDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTY 357
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 111/245 (45%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
++P++ ++N LI CK+ ++ KA KI KM + ++++Y ++GG G+ +A
Sbjct: 422 LEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAM 481
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
++ K++ + G P++ Y+ I +C + L A GL EM GL+P YN
Sbjct: 482 ELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASL 541
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
L + +L+ M C P+ S ++ + + +L MVE G
Sbjct: 542 CKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDA 601
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNK 245
L L + L +G+L EA+ + M+ G P + + + + + NL ++
Sbjct: 602 LTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQ 661
Query: 246 MALFG 250
MA G
Sbjct: 662 MAAKG 666
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 109/244 (44%), Gaps = 2/244 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P + N L+D + R A+ + +M D+ P S +++I +P V
Sbjct: 72 PSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLSALIECFADAQKPQLGFGV 131
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
+ + + G + N ++ C + +A GL+ EM K +SP+ +YN
Sbjct: 132 VGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCK 191
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ L+ + L M GC PN+ +C L+ + +++ A++L M +KGF + +++
Sbjct: 192 AKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVL 251
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEALQNLSNKM 246
L C+ G L ++ F EM+ KG + V++ + L L +EA + N M
Sbjct: 252 YGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEA-NTVLNAM 310
Query: 247 ALFG 250
A G
Sbjct: 311 AEHG 314
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 79/169 (46%), Gaps = 1/169 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G+ P + YN L+ CK+ +E+A + ++M + + PD+IS+ ++I G G
Sbjct: 522 MRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGD 581
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+++ +M E G PDA ++ I L +A ++ MV G +P+A Y+
Sbjct: 582 FQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDS 641
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQ-SCMFLVKLCKRQEKVEI 168
+ D NL +M G + + + L LC ++V++
Sbjct: 642 LLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDV 690
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 86/179 (48%), Gaps = 2/179 (1%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
++G P+ +Y+ LID +CK R + A + +MR ++P + Y +++ L G +
Sbjct: 489 DLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLE 548
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
+A+ + +EM C PD ++N I A + L +MVE GL P+A T++
Sbjct: 549 QAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLI 608
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKG 180
+L + + RM+ +G P+ L+K L + + EI + L + M KG
Sbjct: 609 NRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEI-INLLHQMAAKG 666
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 90/215 (41%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G ++V+YN L+ K ++++A ++ +++ D P+ +Y+ +I G +
Sbjct: 452 MVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRM 511
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A+ + EM+ +G P YN + + C L A L EM P+ ++N
Sbjct: 512 LNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNT 571
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ D + L +M+ G P+ + L+ + +++ A MV G
Sbjct: 572 MIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASG 631
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
F LV D L L G E +M KG
Sbjct: 632 FTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKG 666
Score = 40.0 bits (92), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 28/132 (21%), Positives = 57/132 (43%)
Query: 95 RLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCM 154
+ +A L ++ L P+ T N S + ++++Y RM LP+ S
Sbjct: 54 QFTEAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLS 113
Query: 155 FLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEK 214
L++ +K ++ + ++++GF + + +++ LC G + EA EM K
Sbjct: 114 ALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRK 173
Query: 215 GHKPSQVSFRRI 226
P VS+ +
Sbjct: 174 SVSPDIVSYNTL 185
>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
Length = 814
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 109/215 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ GVKPD+V+Y +I C+ +++ A + +M D+ ++PD +Y +I G G
Sbjct: 420 MRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGS 479
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA++++ E+ G + D +++ I N C R+ DA + D V GL P A Y++
Sbjct: 480 LLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSM 539
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + ++ M+ G PN LV + +++ L L+ +M++KG
Sbjct: 540 LMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKG 599
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
++ +++ D L + G+ V A+ F EM E G
Sbjct: 600 IKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESG 634
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 114/224 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ PD V+Y+ ++ CK R ++KA + +M ++ + P+ +Y ++I G GQ
Sbjct: 245 MVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQ 304
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A V KEM+ + PD + + + C ++++A + D M KG +PN +Y +
Sbjct: 305 WKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTI 364
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L +L+ M+G G P+ + L+K ++ A+ ++N+M + G
Sbjct: 365 MLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHG 424
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
++ + LC +GK+ +A + F +MI++G P + ++
Sbjct: 425 VKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYH 468
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 106/224 (47%), Gaps = 4/224 (1%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDI--SPDVISYTSIIGGLGLVGQ 60
E+G PD+ SY+ L+ C + +A ++ M + SPDV++Y+++I G G
Sbjct: 175 ELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGD 234
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA D+ KEM + G PD Y++ + C A+ + A + +MV KG+ PN TYN
Sbjct: 235 VNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNN 294
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ + + + ++ M LP+ + M + LCK K++ A +++ M K
Sbjct: 295 LIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCK-YGKIKEARDVFDTMAMK 353
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G + ++ + G LV+ F M+ G P +F
Sbjct: 354 GQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTF 397
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 109/229 (47%), Gaps = 3/229 (1%)
Query: 1 MREM---GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGL 57
+R+M GV P+ +YN LI Y Q ++A ++ ++MR I PDV++ + ++G L
Sbjct: 277 LRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCK 336
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
G+ +ARDV M G P+ +Y + Y L D + L D M+ G++P+ T
Sbjct: 337 YGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYT 396
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
+N+ + + L + ++ M G P+ + ++ R K++ A++ +N M+
Sbjct: 397 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMI 456
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++G L C G L++A++ E++ G V F I
Sbjct: 457 DQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSI 505
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 102/237 (43%), Gaps = 2/237 (0%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
+G+ P V Y+ L+D YC ++EKA ++ + M I P+ + Y +++ G +G+ D+
Sbjct: 528 VGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDE 587
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
+ +EM + G P YN I A R A EM E G++ N TYN+ R
Sbjct: 588 GLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLR 647
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
+ + + L+ + N + ++ + +VE A L+ + G
Sbjct: 648 GLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVP 707
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
++ ++ L G + EAE F M G +P + + EL K E ++
Sbjct: 708 CVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHV--VRELLKKNEIVR 762
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 92/235 (39%), Gaps = 37/235 (15%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G++P+ V Y L++ YCK ++++ + +M + I P I Y II GL G+
Sbjct: 560 MVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGR 619
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIR----NYCI------------------------ 92
A+ EM E G + YN +R N C
Sbjct: 620 TVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNT 679
Query: 93 -------AKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
+R+ +A L + GL P TY++ + + +++ M G
Sbjct: 680 MIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAG 739
Query: 146 CLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMG 199
C P+++ +V+ L K+ E V L + + E+ F L + +L DL G
Sbjct: 740 CEPDSRLLNHVVRELLKKNEIVRAGAYL-SKIDERNFSLEHLTTMLLVDLFSSKG 793
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 43/224 (19%), Positives = 82/224 (36%), Gaps = 38/224 (16%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ P +Y L+D + + E A ++ + ++I ++ G + D+A
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEAL 166
Query: 66 DVL-KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGL--SPNATTYNLFF 122
D+L E GC PD +Y+ +++ C + A L+ M E G SP+ Y+
Sbjct: 167 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVI 226
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
F+ D V A L+ +MV++G
Sbjct: 227 DGFFKEGD-----------------------------------VNKACDLFKEMVQRGIP 251
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + LC + +AE +M+ KG P+ ++ +
Sbjct: 252 PDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNL 295
>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
Length = 687
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 107/208 (51%), Gaps = 1/208 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P++ ++N +ID CK+ ++ +A + +M++ PDV+++ S+I G G G+ D+ +
Sbjct: 186 PNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQL 245
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
++EM+ GC D YNA I +C R+ A G M +G+ N T++ F F
Sbjct: 246 VEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCK 305
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+R + L+ +M G N + L+ + +++ A+ L ++MV +G ++
Sbjct: 306 EGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVT 365
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
VL D LC K+ EAE L M+EK
Sbjct: 366 YTVLVDGLCKERKVAEAE-DVLRMMEKA 392
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 119/249 (47%), Gaps = 8/249 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV ++V+Y L+D CK+R+V +A ++ M + + + YT++I G +
Sbjct: 354 MVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKN 413
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA +L EMK G D + Y A I+ C +L +A L+ +M E GL PN Y
Sbjct: 414 SEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTT 473
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ S + + + +++ +G PN + C + LCK ++ A+ +N M +
Sbjct: 474 MMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCK-AGSIDEAISHFNKMRDL 532
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
G + L D LC G L EA + F EM+ KG +V + AL++ KQ
Sbjct: 533 GLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVY---TALLDGYLKQ--- 586
Query: 240 QNLSNKMAL 248
NL + AL
Sbjct: 587 GNLHDAFAL 595
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 103/223 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G K D+V+YN LI+ +CK ++E AY M+ E + +V+++++ + G
Sbjct: 249 MRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGL 308
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + +M+ G + Y I C A RL DA L+DEMV +G+ N TY +
Sbjct: 309 VREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTV 368
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + ++ M G N L+ + E AL L ++M KG
Sbjct: 369 LVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKG 428
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I + L LC++ KL EA+ +M E G +P+ + +
Sbjct: 429 LELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIY 471
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 130/277 (46%), Gaps = 7/277 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G+ + +Y CLID CK +++ A ++++M + + +V++YT ++ GL +
Sbjct: 319 MRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERK 378
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A DVL+ M++ G + Y I + + K A GL+ EM KGL + + Y
Sbjct: 379 VAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGA 438
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + L + +L +M +G PN ++ C + KV A+ + +++ G
Sbjct: 439 LIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSG 498
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS-QVSFRRIKALMELANKQEAL 239
F ++ L D LC G + EA F +M + G P+ Q + L + EA+
Sbjct: 499 FQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAV 558
Query: 240 QNLSNKMALFGPSM-----IPKREEYLAEMSASDSFS 271
Q L N+M G S+ + YL + + D+F+
Sbjct: 559 Q-LFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFA 594
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 113/253 (44%), Gaps = 37/253 (14%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G++P+ + Y ++D K +V +A +++K+ D P+VI+Y ++I GL G
Sbjct: 459 MDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGS 518
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A +M++ G P+ AY A + C L +A L +EMV KG+S + Y
Sbjct: 519 IDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTA 578
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ +L ++ L +M+ +G +++ L + + G
Sbjct: 579 LLDGYLKQGNLHDAFALKAKMIDSG--------------------LQLDLFCYTCFI-SG 617
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEAL 239
F C++ + EA + F EMI G P + + I +L N +EA+
Sbjct: 618 F--------------CNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAI 663
Query: 240 QNLSNKMALFGPS 252
+L ++M PS
Sbjct: 664 -SLQDEMERVLPS 675
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 103/224 (45%), Gaps = 6/224 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+RE+ V P+ + N ++ +DR + ++V ++ ++ +P+V ++ +I L G+
Sbjct: 148 VRELRVPPNTRTCNHILLRLARDR----SGRLVRRLFEQLPAPNVFTFNIVIDFLCKEGE 203
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR + MKE GC PD +N+ I Y L + L++EM G + TYN
Sbjct: 204 LAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNA 263
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEK 179
F + +++ + M G + N + F+ CK + V A++L+ M +
Sbjct: 264 LINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCK-EGLVREAMKLFAQMRVR 322
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G L D C G+L +A EM+ +G + V++
Sbjct: 323 GMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTY 366
>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
Length = 827
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 116/223 (52%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ PD+V+YN ++ CK R ++KA + +M ++ + P+ +Y ++I G GQ
Sbjct: 258 MVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQ 317
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A V KEM+ + PD + + + C ++++A + D M KG +P+ +YN+
Sbjct: 318 WKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNI 377
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L +L+ M+G G P+ + L+K ++ A+ ++N+M + G
Sbjct: 378 MLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHG 437
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + LC +GK+ +A + F +MI++G P + ++
Sbjct: 438 VKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAY 480
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 109/216 (50%), Gaps = 2/216 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ GVKPD+V+Y +I C+ +++ A + +M D+ ++PD +Y +I G G
Sbjct: 433 MRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGS 492
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA++++ E+ G + D +++ I N C R+ DA + D V GL P+A Y++
Sbjct: 493 LLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSM 552
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ + + ++ M+ G PN C + CK +++ L L+ +M+++
Sbjct: 553 LMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCK-IGRIDEGLSLFREMLQR 611
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
G ++ ++ D L G+ V A+ F EM E G
Sbjct: 612 GIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESG 647
Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 108/222 (48%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ PD ++N LI Y ++KA I +MRD + PDV++Y ++I L +G+ D A
Sbjct: 402 GIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDA 461
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ +M + G PD AYN I+ +C L A L+ E++ G+ + ++
Sbjct: 462 MEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINN 521
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + N++ + G P+ L+ K+E AL++++ MV G
Sbjct: 522 LCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPN 581
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++V L + C +G++ E F EM+++G KPS + + I
Sbjct: 582 VVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSII 623
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 105/224 (46%), Gaps = 4/224 (1%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDI--SPDVISYTSIIGGLGLVGQ 60
E+G PD+ SY+ L+ C + +A ++ M + SP+V++Y ++I G G
Sbjct: 188 ELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGD 247
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA D+ KEM + G PD YN+ + C A+ + A + +MV K + PN TYN
Sbjct: 248 VNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNN 307
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ + + + ++ M LP+ + M + LCK K++ A +++ M K
Sbjct: 308 LIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCK-YGKIKEARDVFDTMAMK 366
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G + +++ + G LV+ F M+ G P +F
Sbjct: 367 GQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTF 410
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 104/237 (43%), Gaps = 2/237 (0%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
+G+ PD V Y+ L+D YC ++EKA ++ + M I P+V+ Y +++ G +G+ D+
Sbjct: 541 VGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDE 600
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
+ +EM + G P Y+ I A R A EM E G++ + TYN+ R
Sbjct: 601 GLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLR 660
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
+ + + L+ + N + ++ + +VE A L+ +
Sbjct: 661 GLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVP 720
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
++ ++ L G + EAE F M G +P+ + + EL K E ++
Sbjct: 721 NVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHV--VRELLKKNEIVR 775
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 94/239 (39%), Gaps = 37/239 (15%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G++P++V Y L++ YCK ++++ + +M I P I Y+ II GL G+
Sbjct: 573 MVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGR 632
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIR----NYCI------------------------ 92
A+ EM E G D YN +R N C
Sbjct: 633 TVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNT 692
Query: 93 -------AKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
+R+ +A L + L PN TY++ + + +++ M G
Sbjct: 693 MIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAG 752
Query: 146 CLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVE 203
C PN++ +V+ L K+ E V L + + E+ F L + +L DL G E
Sbjct: 753 CEPNSRLLNHVVRELLKKNEIVRAGAYL-SKIDERNFSLEHLTAMLLVDLFSSKGTCRE 810
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/224 (19%), Positives = 83/224 (37%), Gaps = 38/224 (16%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ P +Y L+D + + E A ++ + ++I ++ G + D+A
Sbjct: 120 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 179
Query: 66 DVL-KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGL--SPNATTYNLFF 122
D+L E GC PD +Y+ +++ C + A L+ M E G SPN YN
Sbjct: 180 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVI 239
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
F+ D V A L+ +MV++G
Sbjct: 240 DGFFKEGD-----------------------------------VNKACDLFKEMVQRGIP 264
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ + + LC + +AE +M+ K P+ ++ +
Sbjct: 265 PDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNL 308
>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
Length = 799
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 113/246 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ PD+V+Y +ID CK + ++A + ++M D P+ +Y +I G +G+
Sbjct: 225 MIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGK 284
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ +L+EM G PD Y + + C R R+A D M+ KG+ P +TY +
Sbjct: 285 WKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGI 344
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L + M+ G P+ + ++ A+ ++N M + G
Sbjct: 345 LIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHG 404
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
++ L D LC +G++ +AE F +MI +G P+ V F + + +K E +
Sbjct: 405 LSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAE 464
Query: 241 NLSNKM 246
L +M
Sbjct: 465 ELVYEM 470
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 120/236 (50%), Gaps = 1/236 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV P+IV +N L+ C + E+A ++V +M D+ I P+ + + ++I L VG+ +
Sbjct: 439 GVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEG 498
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
R ++ M+ G PDA +Y I YC+ R +A + D MV GLSP TYN
Sbjct: 499 RRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHG 558
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ ++ + ++ L+ M+ G P + ++ + ++ A +L+ +M+ G
Sbjct: 559 YCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCD 618
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEAL 239
I +++ + LC + EA K F + KG + + ++F I AL++ K++A+
Sbjct: 619 IYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAM 674
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 108/226 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G KP+ +YNCLI Y + ++ +++E+M + PD +Y S++ L G+
Sbjct: 260 MIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGR 319
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR M G P + Y I Y L + +D MVE GLSP+ +N+
Sbjct: 320 CREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNI 379
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
FF + + + +++ +M G PN + L+ + +V+ A +N M+ +G
Sbjct: 380 FFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEG 439
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
I+V + L LC + K AE+ EM+++G P+ V F +
Sbjct: 440 VTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTL 485
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 99/227 (43%), Gaps = 5/227 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDED---ISPDVISYTSIIGGLGL 57
M E+G PD VSY L+ C +++ E+A +++ M D+ P+V+SY+ +I G
Sbjct: 152 MPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVINGFFT 211
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
GQ DK ++ EM + G PD Y I C A+ A G+ +M++ G PN T
Sbjct: 212 EGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYT 271
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
YN + + + M G P+ + L+ + + A ++ M+
Sbjct: 272 YNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMI 331
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLE-MIEKGHKPSQVSF 223
KG + +L G L E SFL+ M+E G P F
Sbjct: 332 RKGIKPKVSTYGILIHGYATKGALSEMH-SFLDLMVENGLSPDHHIF 377
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 105/244 (43%), Gaps = 1/244 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +GV+PD SY LI YC + ++A K+ + M +SP ++Y +++ G +
Sbjct: 505 MEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASR 564
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A + +EM G P YN + KR +A L M+ G + TYN+
Sbjct: 565 IDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNI 624
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
SN + ++ ++ + G N + ++ + + E A+ L+ + G
Sbjct: 625 ILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANG 684
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP-SQVSFRRIKALMELANKQEAL 239
++ ++ + L + G L E + F M + G P SQ+ ++ L+ + A
Sbjct: 685 LVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAG 744
Query: 240 QNLS 243
LS
Sbjct: 745 AYLS 748
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 102/223 (45%), Gaps = 4/223 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIV-EKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
G + D ++ N L+ C ++V +A ++ ++M + PD +SYT ++ GL + ++
Sbjct: 120 GWRMDHIAINQLLKGLCHGKRVGEAMDVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEE 179
Query: 64 ARDVLKEMK-EYG--CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A ++L M ++G C P+ +Y+ I + ++ L EM+++G+ P+ TY
Sbjct: 180 ALELLHMMADDHGRRCPPNVVSYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTT 239
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + ++ +M+ G PN + L+ K + +Q+ +M +G
Sbjct: 240 VIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARG 299
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
L + LC G+ EA F MI KG KP ++
Sbjct: 300 LKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTY 342
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 97/242 (40%), Gaps = 40/242 (16%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
V P++ +Y+ LI +C+ +E + + D I+ ++ GL + +A
Sbjct: 86 VAPNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAM 145
Query: 66 DVL-KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVE---KGLSPNATTYNLF 121
DVL + M E GC PD +Y ++ C KR +A L+ M + + PN +Y++
Sbjct: 146 DVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIV 205
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
F+ + +NL FL +M+++G
Sbjct: 206 INGFFTEGQVDKPYNL-----------------FL------------------EMIDRGI 230
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEALQ 240
++ + D LC AE F +MI+ G KP+ ++ I + + +E +Q
Sbjct: 231 PPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQ 290
Query: 241 NL 242
L
Sbjct: 291 ML 292
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 81/216 (37%), Gaps = 35/216 (16%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G+ P V+YN L+ YC +++ AY + +M + ++P V++Y +I+ GL +
Sbjct: 540 MVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKR 599
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAK-------------------------- 94
+A+++ M G D YN + C +
Sbjct: 600 FSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTI 659
Query: 95 ---------RLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
R DA L + GL PN TY L L +L+ M G
Sbjct: 660 MIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNG 719
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
PN+Q LV+ + + A + + E+ F
Sbjct: 720 TAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNF 755
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 24/121 (19%), Positives = 55/121 (45%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G++ +I+++ +I K + E A + + + P+V++Y + L G ++
Sbjct: 649 GLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEF 708
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ M++ G P++ NA +R + A + ++ E+ S A+T +L +
Sbjct: 709 DSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSLLMSI 768
Query: 125 F 125
F
Sbjct: 769 F 769
>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
Length = 729
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 118/253 (46%), Gaps = 2/253 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD V++N ++ C+ V++A K+V+ M + PD+++Y+SI+ GL VG+ D A ++
Sbjct: 300 PDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVEL 359
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L +K YGC PD AY ++ C ++ A LM EMV P+ T+N
Sbjct: 360 LSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQ 419
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ + + +M GC P+ + ++ + ++ A++L +++ G I+
Sbjct: 420 KGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVT 479
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMA 247
+ L LC + + +AE+ + M+ P +F + + L K LQ +
Sbjct: 480 FNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTV--ITSLCQKGLLLQAIETLKI 537
Query: 248 LFGPSMIPKREEY 260
+ IP + Y
Sbjct: 538 MAENGCIPNQSTY 550
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 123/255 (48%), Gaps = 2/255 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G PDIV+Y+ ++D C +V+ A +++ +++ PD I+YT+++ GL + Q
Sbjct: 328 MSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQ 387
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A +++ EM C PD +N I + C + A ++++M E G +P+ TYN
Sbjct: 388 WEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNS 447
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + L + GC P+ + L+K ++ E A QL +M+
Sbjct: 448 IIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSD 507
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEAL 239
+ + LC G L++A ++ M E G P+Q ++ + AL++ QEAL
Sbjct: 508 CPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEAL 567
Query: 240 QNLSNKMALFGPSMI 254
+ LS M P +I
Sbjct: 568 KLLSG-MTNGTPDLI 581
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 107/229 (46%), Gaps = 2/229 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P +V+Y+ L+D CK +A ++++MR + PD+++Y +I + G
Sbjct: 188 MLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGD 247
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A ++L ++ +GC PDA Y +++ C ++R ++ L EM +P+ T+N
Sbjct: 248 VDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNT 307
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ + + M GC+P+ + L LC +V+ A++L + +
Sbjct: 308 IVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVG-RVDDAVELLSRLKSY 366
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKA 228
G + + LC + + AE+ EM+ P +V+F + A
Sbjct: 367 GCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIA 415
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 116/260 (44%), Gaps = 6/260 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
++ G KPD ++Y ++ C Q E A +++ +M D PD +++ ++I L G
Sbjct: 363 LKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGL 422
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A V+++M E GC PD YN+ I C + + DA L+ + G P+ T+N
Sbjct: 423 VDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNT 482
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPN-TQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ + + L MM + C P+ T + LC++ ++ A++ M E
Sbjct: 483 LLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQ-AIETLKIMAEN 541
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
G +++ D L GK EA K L + G P +++ + + + A K E
Sbjct: 542 GCIPNQSTYNIVVDALLKAGKTQEALK-LLSGMTNG-TPDLITYNTVISNITKAGKMEEA 599
Query: 240 QNLSNKMALFG--PSMIPKR 257
+L M G P I R
Sbjct: 600 LDLLRVMVSNGLSPDTITYR 619
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 122/284 (42%), Gaps = 24/284 (8%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
+G +V+YN +++ YC+ ++E A +++ M PD ++ +I L + G+
Sbjct: 124 LGASATVVTYNTMVNGYCRAGRIEDARRLISGM---PFPPDTFTFNPLIRALCVRGRVPD 180
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
A V +M GC P Y+ + C A R A L+DEM KG P+ TYN+
Sbjct: 181 ALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLIN 240
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFG 182
D+ + N+ + GC P+ + ++K LC + E+ +L+ +M
Sbjct: 241 AMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVE-ELFAEMASNKCA 299
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI-KALMELANKQEALQN 241
+ + + LC G + A K M E G P V++ I L ++ +A++
Sbjct: 300 PDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVEL 359
Query: 242 LSNKMALFG--PSMIP---------------KREEYLAEMSASD 268
LS ++ +G P I EE +AEM SD
Sbjct: 360 LS-RLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSD 402
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 115/282 (40%), Gaps = 36/282 (12%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYT----------- 49
MR G +PDIV+YN LI+ C + V++A I+ + PD ++YT
Sbjct: 223 MRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSER 282
Query: 50 ------------------------SIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNA 85
+I+ L G D+A V+ M E+GC PD Y++
Sbjct: 283 WKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSS 342
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
+ C R+ DA L+ + G P+ Y + + L M+ +
Sbjct: 343 ILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSD 402
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
C P+ + ++ ++ V+ A+++ M E G I+ + + D LC+ + +A
Sbjct: 403 CPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAM 462
Query: 206 KSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLSNKM 246
+ + G KP V+F +K L + ++A Q + N M
Sbjct: 463 ELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMM 504
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 91/183 (49%), Gaps = 6/183 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G P+ +YN ++D K + ++A K++ M + +PD+I+Y ++I + G+
Sbjct: 538 MAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNG--TPDLITYNTVISNITKAGK 595
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A D+L+ M G PD Y + C A ++ + + GLSP+AT YN
Sbjct: 596 MEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYND 655
Query: 121 FFRVF--YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
F W D+ + + + M+ +GC+P+ + + L++ + ++ A QL ++
Sbjct: 656 ILLGFCQNWRTDI--AIDCFAHMVSSGCMPDESTYIILLEALAYECLLDEAKQLLVNLCS 713
Query: 179 KGF 181
G
Sbjct: 714 LGV 716
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 64/140 (45%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD+++YN +I K ++E+A ++ M +SPD I+Y S+ G+ D+A +
Sbjct: 578 PDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRM 637
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L +++ G PDA YN + +C R A MV G P+ +TY + +
Sbjct: 638 LCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEALAY 697
Query: 128 SNDLRSSWNLYCRMMGTGCL 147
L + L + G L
Sbjct: 698 ECLLDEAKQLLVNLCSLGVL 717
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 77/185 (41%), Gaps = 3/185 (1%)
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
+ D + G YN + YC A R+ DA L+ M P+ T+N
Sbjct: 113 RVADAERVFATLGASATVVTYNTMVNGYCRAGRIEDARRLISGM---PFPPDTFTFNPLI 169
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
R + + ++ M+ GC P+ + L+ + A+ L ++M KG
Sbjct: 170 RALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCE 229
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNL 242
I+ +VL + +C+ G + EA ++ G KP V++ + + + + + ++ L
Sbjct: 230 PDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEEL 289
Query: 243 SNKMA 247
+MA
Sbjct: 290 FAEMA 294
>gi|125555763|gb|EAZ01369.1| hypothetical protein OsI_23402 [Oryza sativa Indica Group]
Length = 619
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 107/208 (51%), Gaps = 1/208 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P++ ++N +ID CK+ ++ +A + +M++ PDV+++ S+I G G G+ D+ +
Sbjct: 186 PNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQL 245
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
++EM+ GC D YNA I +C R+ A G M +G+ N T++ F F
Sbjct: 246 VEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCK 305
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+R + L+ +M G N + L+ + +++ A+ L ++MV +G ++
Sbjct: 306 EGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVT 365
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
VL D LC K+ EAE L M+EK
Sbjct: 366 YTVLVDGLCKERKVAEAE-DVLRMMEKA 392
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 103/223 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G K D+V+YN LI+ +CK ++E AY M+ E + +V+++++ + G
Sbjct: 249 MRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGL 308
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + +M+ G + Y I C A RL DA L+DEMV +G+ N TY +
Sbjct: 309 VREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTV 368
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + ++ M G N L+ + E AL L ++M KG
Sbjct: 369 LVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKG 428
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I + L LC++ KL EA+ +M E G +P+ + +
Sbjct: 429 LELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIY 471
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 100/215 (46%), Gaps = 13/215 (6%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV ++V+Y L+D CK+R+V +A ++ M + + + YT++I G +
Sbjct: 354 MVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKN 413
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA +L EMK G D + Y A I+ C +L +A L+ +M E GL PN Y
Sbjct: 414 SEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTT 473
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ S + + + +++ +G PN C+ A+QL+N+MV KG
Sbjct: 474 MMDACFKSGKVPEAIAMLQKILDSGFQPN-NGCL------------NEAVQLFNEMVHKG 520
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
+V L D G L +A +MI+ G
Sbjct: 521 MSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSG 555
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 103/224 (45%), Gaps = 6/224 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+RE+ V P+ + N ++ +DR + ++V ++ ++ +P+V ++ +I L G+
Sbjct: 148 VRELRVPPNTRTCNHILLRLARDR----SGRLVRRLFEQLPAPNVFTFNIVIDFLCKEGE 203
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR + MKE GC PD +N+ I Y L + L++EM G + TYN
Sbjct: 204 LAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNA 263
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEK 179
F + +++ + M G + N + F+ CK + V A++L+ M +
Sbjct: 264 LINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCK-EGLVREAMKLFAQMRVR 322
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G L D C G+L +A EM+ +G + V++
Sbjct: 323 GMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTY 366
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 115/248 (46%), Gaps = 19/248 (7%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G+ + +Y CLID CK +++ A ++++M + + +V++YT ++ GL +
Sbjct: 319 MRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERK 378
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A DVL+ M++ G + Y I + + K A GL+ EM KGL + + Y
Sbjct: 379 VAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGA 438
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + L + +L +M +G PN ++ C + KV A+ + +++ G
Sbjct: 439 LIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSG 498
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
F + G L EA + F EM+ KG +V + AL++ KQ
Sbjct: 499 FQP-------------NNGCLNEAVQLFNEMVHKGMSLDKVVY---TALLDGYLKQ---G 539
Query: 241 NLSNKMAL 248
NL + AL
Sbjct: 540 NLHDAFAL 547
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 41/87 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ D V Y L+D Y K + A+ + KM D + D+ YT I G +
Sbjct: 516 MVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNM 575
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAI 87
+AR+V EM +G PD A YN I
Sbjct: 576 MPEAREVFSEMIGHGIAPDRAVYNCLI 602
Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 22/141 (15%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISP----------------- 43
M E G++P+ + Y ++D K +V +A +++K+ D P
Sbjct: 459 MDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNNGCLNEAVQLFNEMVH 518
Query: 44 -----DVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRD 98
D + YT+++ G G A + +M + G D Y I +C + +
Sbjct: 519 KGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPE 578
Query: 99 ASGLMDEMVEKGLSPNATTYN 119
A + EM+ G++P+ YN
Sbjct: 579 AREVFSEMIGHGIAPDRAVYN 599
>gi|255546465|ref|XP_002514292.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546748|gb|EEF48246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 608
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 119/252 (47%), Gaps = 3/252 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+ E G+KPD + YN +I+ + + V++A KI +KM+D P ++ ++I G G G+
Sbjct: 119 VEENGMKPDSILYNAMINAFSESGNVKEAMKIFQKMKDTGCKPTTSTFNTLIKGYGNAGK 178
Query: 61 PDKARDVLKEMKEYGCY-PDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
P++ +L M G P+ YN +R +C K + +A ++ +MV G+ P+ TYN
Sbjct: 179 PEEGLKMLHLMSLDGSVKPNDRTYNILVRAWCSKKNIEEAWNVLHKMVASGIQPDVVTYN 238
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVE 178
+ R + + + +L M PN ++C +V CK +E AL+ M E
Sbjct: 239 ILARAYAQKGETLRAEDLILEMQYEKVAPNERTCGIIVNGYCKEGNMIE-ALRFVYRMKE 297
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEA 238
G +++ + L D+ +++ M E G KP ++F I A +
Sbjct: 298 LGVHPNLVIFNSLIKGFLDITDTDGVDEALTLMEEYGVKPDVITFSTIMNAWSSAGLMDK 357
Query: 239 LQNLSNKMALFG 250
Q + N MA G
Sbjct: 358 CQEIFNDMAKAG 369
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 109/234 (46%), Gaps = 2/234 (0%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E G +P +++Y L+ K + E + ++ K+ + + PD I Y ++I G
Sbjct: 86 EDGHRPTLITYTTLVAALTKLKHFESIFLLISKVEENGMKPDSILYNAMINAFSESGNVK 145
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEM-VEKGLSPNATTYNLF 121
+A + ++MK+ GC P + +N I+ Y A + + ++ M ++ + PN TYN+
Sbjct: 146 EAMKIFQKMKDTGCKPTTSTFNTLIKGYGNAGKPEEGLKMLHLMSLDGSVKPNDRTYNIL 205
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
R + ++ +WN+ +M+ +G P+ + L + ++ + A L +M +
Sbjct: 206 VRAWCSKKNIEEAWNVLHKMVASGIQPDVVTYNILARAYAQKGETLRAEDLILEMQYEKV 265
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELAN 234
++ + C G ++EA + M E G P+ V F IK +++ +
Sbjct: 266 APNERTCGIIVNGYCKEGNMIEALRFVYRMKELGVHPNLVIFNSLIKGFLDITD 319
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 101/247 (40%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
VKP+ +YN L+ +C + +E+A+ ++ KM I PDV++Y + G+ +A
Sbjct: 195 VKPNDRTYNILVRAWCSKKNIEEAWNVLHKMVASGIQPDVVTYNILARAYAQKGETLRAE 254
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
D++ EM+ P+ + YC + +A + M E G+ PN +N + F
Sbjct: 255 DLILEMQYEKVAPNERTCGIIVNGYCKEGNMIEALRFVYRMKELGVHPNLVIFNSLIKGF 314
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
D M G P+ + ++ ++ +++NDM + G I
Sbjct: 315 LDITDTDGVDEALTLMEEYGVKPDVITFSTIMNAWSSAGLMDKCQEIFNDMAKAGIEPDI 374
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNK 245
+L G+ AE M + G +P+ V I + A K E + + K
Sbjct: 375 HAFSILAKGYVRAGETENAESVLTSMAKSGVRPNVVICTTIISGWCSAGKMENAKMVYEK 434
Query: 246 MALFGPS 252
M G S
Sbjct: 435 MCEIGIS 441
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 110/238 (46%), Gaps = 16/238 (6%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E+GV P++V +N LI + + + + M + + PDVI++++I+ G
Sbjct: 295 MKELGVHPNLVIFNSLIKGFLDITDTDGVDEALTLMEEYGVKPDVITFSTIMNAWSSAGL 354
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DK +++ +M + G PD A++ + Y A +A ++ M + G+ PN
Sbjct: 355 MDKCQEIFNDMAKAGIEPDIHAFSILAKGYVRAGETENAESVLTSMAKSGVRPNVVICTT 414
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV---KLCKRQEKVEIALQLWNDMV 177
+ + + ++ +Y +M G PN ++ L+ ++ K E LQL M
Sbjct: 415 IISGWCSAGKMENAKMVYEKMCEIGISPNLKTFETLIWGYAEARQPGKAEELLQL---ME 471
Query: 178 EKGF----GSYILVSDVL--FDLLCDMGKLVEAEKSFLEM---IEKGHKPSQVSFRRI 226
EKG + LV+D LLC+ ++ + E+ E+ ++G P + S RI
Sbjct: 472 EKGVFPEKSTIQLVADAWRNIGLLCEAKRITKIEEEDEELYADCKRGEIPVE-SLERI 528
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/221 (19%), Positives = 102/221 (46%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
V P+ + +++ YCK+ + +A + V +M++ + P+++ + S+I G + D
Sbjct: 265 VAPNERTCGIIVNGYCKEGNMIEALRFVYRMKELGVHPNLVIFNSLIKGFLDITDTDGVD 324
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+ L M+EYG PD ++ + + A + + ++M + G+ P+ +++ + +
Sbjct: 325 EALTLMEEYGVKPDVITFSTIMNAWSSAGLMDKCQEIFNDMAKAGIEPDIHAFSILAKGY 384
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ + ++ ++ M +G PN C ++ K+E A ++ M E G +
Sbjct: 385 VRAGETENAESVLTSMAKSGVRPNVVICTTIISGWCSAGKMENAKMVYEKMCEIGISPNL 444
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ L + + +AE+ M EKG P + + + +
Sbjct: 445 KTFETLIWGYAEARQPGKAEELLQLMEEKGVFPEKSTIQLV 485
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/197 (20%), Positives = 91/197 (46%), Gaps = 1/197 (0%)
Query: 16 LIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYG 75
L+++ + +A I + + ++ P +I+YT+++ L + + ++ +++E G
Sbjct: 64 LMNILIGKGKPHEANLIFDNLVEDGHRPTLITYTTLVAALTKLKHFESIFLLISKVEENG 123
Query: 76 CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSW 135
PD+ YNA I + + +++A + +M + G P +T+N + + +
Sbjct: 124 MKPDSILYNAMINAFSESGNVKEAMKIFQKMKDTGCKPTTSTFNTLIKGYGNAGKPEEGL 183
Query: 136 NLYCRMMGTGCL-PNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDL 194
+ M G + PN ++ LV+ ++ +E A + + MV G ++ ++L
Sbjct: 184 KMLHLMSLDGSVKPNDRTYNILVRAWCSKKNIEEAWNVLHKMVASGIQPDVVTYNILARA 243
Query: 195 LCDMGKLVEAEKSFLEM 211
G+ + AE LEM
Sbjct: 244 YAQKGETLRAEDLILEM 260
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 78/183 (42%), Gaps = 7/183 (3%)
Query: 45 VISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMD 104
V S T ++ L G+P +A + + E G P Y + K L+
Sbjct: 58 VHSRTKLMNILIGKGKPHEANLIFDNLVEDGHRPTLITYTTLVAALTKLKHFESIFLLIS 117
Query: 105 EMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQE 164
++ E G+ P++ YN F S +++ + ++ +M TGC P T + L+K
Sbjct: 118 KVEENGMKPDSILYNAMINAFSESGNVKEAMKIFQKMKDTGCKPTTSTFNTLIKGYGNAG 177
Query: 165 KVEIALQLWNDMVEKGFGSYILVSDVLFDLL----CDMGKLVEAEKSFLEMIEKGHKPSQ 220
K E L++ + M G + +D +++L C + EA +M+ G +P
Sbjct: 178 KPEEGLKMLHLMSLDG---SVKPNDRTYNILVRAWCSKKNIEEAWNVLHKMVASGIQPDV 234
Query: 221 VSF 223
V++
Sbjct: 235 VTY 237
>gi|3107905|dbj|BAA25906.1| leaf protein [Ipomoea nil]
Length = 665
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 113/225 (50%), Gaps = 5/225 (2%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G++PD + +N +I+ +C+ V++A KI KMR++ P ++ ++I G G++G+P+++
Sbjct: 133 GLRPDSIFFNPMINAFCESGNVKEAMKIFRKMREKGCKPTASTFNALIKGFGIIGKPEES 192
Query: 65 RDVLKEM-KEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
+L+ M +E PD YN ++ +C + A G++ MV GL P+ TYN R
Sbjct: 193 SKLLEIMSREENIKPDDRTYNILVQAWCNKNNIEKAWGVVHRMVGAGLKPDVVTYNTIAR 252
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
+ + + L +M PN ++C +V ++ + AL+ M +GFG
Sbjct: 253 AYARGKETSRAAELISQMQNNKVAPNVRTCGIVVDGYSKEGNMADALKFIYKM--QGFGV 310
Query: 184 Y--ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + + + L D+ +++ M E G KP V++ I
Sbjct: 311 HPNLFIFNSLLKGFLDITDTKGVDETLTLMQEFGVKPDVVTYSTI 355
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 115/245 (46%), Gaps = 2/245 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+ E G +P +V+Y ++ ++ + +++K+ + PD I + +I G
Sbjct: 94 LTEEGHRPTLVTYTTVLAALTLQKRFKSIPLLLKKVEQNGLRPDSIFFNPMINAFCESGN 153
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMV-EKGLSPNATTYN 119
+A + ++M+E GC P A+ +NA I+ + I + ++S L++ M E+ + P+ TYN
Sbjct: 154 VKEAMKIFRKMREKGCKPTASTFNALIKGFGIIGKPEESSKLLEIMSREENIKPDDRTYN 213
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ + + N++ +W + RM+G G P+ + + + R ++ A +L + M
Sbjct: 214 ILVQAWCNKNNIEKAWGVVHRMVGAGLKPDVVTYNTIARAYARGKETSRAAELISQMQNN 273
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEA 238
+ ++ D G + +A K +M G P+ F +K +++ + +
Sbjct: 274 KVAPNVRTCGIVVDGYSKEGNMADALKFIYKMQGFGVHPNLFIFNSLLKGFLDITDTKGV 333
Query: 239 LQNLS 243
+ L+
Sbjct: 334 DETLT 338
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 82/175 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E GVKPD+V+Y+ +++ + +EK ++ + M I PD +++ + G G+
Sbjct: 340 MQEFGVKPDVVTYSTIMNAWSSAGLMEKCEEMFQDMIKSGIEPDNHAFSILAKGYVRAGE 399
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
P KA +L+ M +G +P+ + I +C A ++ DA + D M + PN T+
Sbjct: 400 PKKAEALLEAMATHGAHPNVVMFTTIISGWCSAAKMEDALRVYDRMCRMDVQPNLNTFET 459
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWND 175
+ +N+ + L M G LP + + + + A ++ ND
Sbjct: 460 LIWGYGEANEPWKAEELLQIMEEMGVLPRKNTVQLVADAWRAIGFINEAKRILND 514
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 91/225 (40%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
RE +KPD +YN L+ +C +EKA+ +V +M + PDV++Y +I +
Sbjct: 201 REENIKPDDRTYNILVQAWCNKNNIEKAWGVVHRMVGAGLKPDVVTYNTIARAYARGKET 260
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
+A +++ +M+ P+ + Y + DA + +M G+ PN +N
Sbjct: 261 SRAAELISQMQNNKVAPNVRTCGIVVDGYSKEGNMADALKFIYKMQGFGVHPNLFIFNSL 320
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
+ F D + M G P+ + ++ +E +++ DM++ G
Sbjct: 321 LKGFLDITDTKGVDETLTLMQEFGVKPDVVTYSTIMNAWSSAGLMEKCEEMFQDMIKSGI 380
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+L G+ +AE M G P+ V F I
Sbjct: 381 EPDNHAFSILAKGYVRAGEPKKAEALLEAMATHGAHPNVVMFTTI 425
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/222 (18%), Positives = 100/222 (45%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+KPD+V+YN + Y + ++ +A +++ +M++ ++P+V + ++ G G A
Sbjct: 239 GLKPDVVTYNTIARAYARGKETSRAAELISQMQNNKVAPNVRTCGIVVDGYSKEGNMADA 298
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ +M+ +G +P+ +N+ ++ + + + M E G+ P+ TY+
Sbjct: 299 LKFIYKMQGFGVHPNLFIFNSLLKGFLDITDTKGVDETLTLMQEFGVKPDVVTYSTIMNA 358
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + + ++ M+ +G P+ + L K R + + A L M G
Sbjct: 359 WSSAGLMEKCEEMFQDMIKSGIEPDNHAFSILAKGYVRAGEPKKAEALLEAMATHGAHPN 418
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+++ + C K+ +A + + M +P+ +F +
Sbjct: 419 VVMFTTIISGWCSAAKMEDALRVYDRMCRMDVQPNLNTFETL 460
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/157 (21%), Positives = 70/157 (44%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ GV P++ +N L+ + + + + M++ + PDV++Y++I+ G
Sbjct: 305 MQGFGVHPNLFIFNSLLKGFLDITDTKGVDETLTLMQEFGVKPDVVTYSTIMNAWSSAGL 364
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+K ++ ++M + G PD A++ + Y A + A L++ M G PN +
Sbjct: 365 MEKCEEMFQDMIKSGIEPDNHAFSILAKGYVRAGEPKKAEALLEAMATHGAHPNVVMFTT 424
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV 157
+ + + + +Y RM PN + L+
Sbjct: 425 IISGWCSAAKMEDALRVYDRMCRMDVQPNLNTFETLI 461
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/176 (19%), Positives = 80/176 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ V P++ + ++D Y K+ + A K + KM+ + P++ + S++ G +
Sbjct: 270 MQNNKVAPNVRTCGIVVDGYSKEGNMADALKFIYKMQGFGVHPNLFIFNSLLKGFLDITD 329
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ L M+E+G PD Y+ + + A + + +M++ G+ P+ +++
Sbjct: 330 TKGVDETLTLMQEFGVKPDVVTYSTIMNAWSSAGLMEKCEEMFQDMIKSGIEPDNHAFSI 389
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDM 176
+ + + + + + L M G PN ++ K+E AL++++ M
Sbjct: 390 LAKGYVRAGEPKKAEALLEAMATHGAHPNVVMFTTIISGWCSAAKMEDALRVYDRM 445
>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 636
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 115/221 (52%), Gaps = 7/221 (3%)
Query: 1 MREM---GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGL 57
REM + PD ++N L+D CK+ ++ A ++ M E + P+V++Y+S++ G L
Sbjct: 266 FREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCL 325
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
V Q +KA+ VL + + G P+A +Y I +C K + +A L ++M KG++P+ T
Sbjct: 326 VNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVT 385
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPN--TQSCMFLVKLCKRQEKVEIALQLWND 175
YN S + +W L M G N T +C+ + LCK V+ A+ L
Sbjct: 386 YNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCL-IDALCKNHH-VDQAIALVKK 443
Query: 176 MVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGH 216
+ ++G + ++L LC +G+L A+ F +++ KG+
Sbjct: 444 IKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGY 484
Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 113/217 (52%), Gaps = 3/217 (1%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
VK ++V YN +ID CK + V AY++ +M + ISPDV++++++I G +VGQ ++A
Sbjct: 204 VKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAF 263
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+ +EM PD +N + C L+ A ++ M+++G+ PN TY+ +
Sbjct: 264 GLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGY 323
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
N + + ++ + G PN S C + CK + V+ AL L+NDM KG
Sbjct: 324 CLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIK-MVDEALSLFNDMQFKGIAPD 382
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQV 221
+ + L D LC G++ A + EM + G +P+ +
Sbjct: 383 KVTYNSLIDGLCKSGRISYAWELVDEMHDNG-QPANI 418
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 116/240 (48%), Gaps = 3/240 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV P++V+Y+ L+D YC QV KA ++ + +P+ SY ++I G +
Sbjct: 304 MMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKM 363
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + +M+ G PD YN+ I C + R+ A L+DEM + G N TYN
Sbjct: 364 VDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNC 423
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEK 179
++ + + L ++ G P+ + L+ LCK +++ A ++ D++ K
Sbjct: 424 LIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVG-RLKNAQDVFQDLLSK 482
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEA 238
G+ +++ + LC G EAE +M + G P V++ I+AL ++A
Sbjct: 483 GYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQALFHKDENEKA 542
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 113/256 (44%), Gaps = 2/256 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ PDI ++N LI+ YC ++ A+ ++ K+ PD I++ ++I GL L G+ +A
Sbjct: 98 GITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEA 157
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ G + D +Y I C R A ++ ++ K + N YN
Sbjct: 158 LHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDS 217
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ ++ LY +M+ P+ + L+ ++E A L+ +MV K
Sbjct: 218 LCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPD 277
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSN 244
++L D LC G L A+ + M+++G P+ V++ + L N+ +++ N
Sbjct: 278 YYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLN 337
Query: 245 KMALFGPSMIPKREEY 260
++ G + P Y
Sbjct: 338 TISQMGAA--PNAHSY 351
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/220 (19%), Positives = 95/220 (43%), Gaps = 8/220 (3%)
Query: 10 IVSYNCLIDVYCK--DRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
I+ +N ++ K + A + ++ I+PD+ ++ +I + + + A +
Sbjct: 66 IIEFNKILGSLVKSNNNHYPTAISLSRRLEFHGITPDIFTFNILINCYCHMAEMNFAFSM 125
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
+ ++ + G PD +N I+ C+ ++++A D ++ G + +Y
Sbjct: 126 MAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLINGLCK 185
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMF---LVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ R++ + ++ G L M+ + LCK + ++ A +L++ M+ K
Sbjct: 186 IGETRTALQMLRKIDGK--LVKINVVMYNTIIDSLCKHKLVID-AYELYSQMIAKKISPD 242
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
++ L C +G+L EA F EM+ K P +F
Sbjct: 243 VVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFN 282
>gi|357480939|ref|XP_003610755.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512090|gb|AES93713.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 596
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 122/235 (51%), Gaps = 8/235 (3%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
+E G +PD+ +YN I+ YC D+ K +++E+MR P+ ++YT ++ G G GQ
Sbjct: 342 KEHGFEPDVFTYNNFIESYCHDKDFRKVDEVLEEMRGNGCPPNAVTYTILLLGYGKAGQL 401
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
KA + + MK+ G PD Y++ + A RL+DA + D+M ++G+ + TYN
Sbjct: 402 SKALEEYERMKKDGIVPDTPFYSSLMYILGKAGRLKDACEVFDDMPKQGVVRDVVTYNTM 461
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
+ ++ L M T C P+ Q+ L+K+C +++++++ L + M +
Sbjct: 462 ISTACAHSKEETALRLLKEMEETSCKPDLQTYHPLLKMCCKKKRMKVLKFLLDHMFKHDL 521
Query: 182 ----GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMEL 232
G+Y L L L + GKLVEA F EM+ KG P + + + + +E+
Sbjct: 522 CPDRGTYTL----LVQSLSNSGKLVEACTFFEEMVSKGFTPMETTVKLLTRKLEI 572
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 121/260 (46%), Gaps = 3/260 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV+ D + N L+D K + +E A+ ++++ + + S+ +I G V
Sbjct: 272 MGKYGVEKDTAALNKLLDALVKGQSIEIAHNVLDEFKS-SVPLSSPSFNILINGWCKVRN 330
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KAR V++E KE+G PD YN I +YC K R +++EM G PNA TY +
Sbjct: 331 FEKARKVMEERKEHGFEPDVFTYNNFIESYCHDKDFRKVDEVLEEMRGNGCPPNAVTYTI 390
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + L + Y RM G +P+T L+ + + +++ A ++++DM ++G
Sbjct: 391 LLLGYGKAGQLSKALEEYERMKKDGIVPDTPFYSSLMYILGKAGRLKDACEVFDDMPKQG 450
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
++ + + C K A + EM E KP ++ + + + + L+
Sbjct: 451 VVRDVVTYNTMISTACAHSKEETALRLLKEMEETSCKPDLQTYHPLLKMCCKKKRMKVLK 510
Query: 241 NLSNKMALFGPSMIPKREEY 260
L + M F + P R Y
Sbjct: 511 FLLDHM--FKHDLCPDRGTY 528
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 91/186 (48%), Gaps = 5/186 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G+ PD Y+ L+ + K +++ A ++ + M + + DV++Y ++I +
Sbjct: 411 MKKDGIVPDTPFYSSLMYILGKAGRLKDACEVFDDMPKQGVVRDVVTYNTMISTACAHSK 470
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A +LKEM+E C PD Y+ ++ C KR++ L+D M + L P+ TY L
Sbjct: 471 EETALRLLKEMEETSCKPDLQTYHPLLKMCCKKKRMKVLKFLLDHMFKHDLCPDRGTYTL 530
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ S L + + M+ G P + VKL R+ +++ L+ D +E+
Sbjct: 531 LVQSLSNSGKLVEACTFFEEMVSKGFTPMETT----VKLLTRKLEIKSMLK-EKDQIEEL 585
Query: 181 FGSYIL 186
++L
Sbjct: 586 MAGHVL 591
>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 713
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 107/208 (51%), Gaps = 1/208 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P++ ++N +ID CK+ ++ +A + +M++ PDV+++ S+I G G G+ D+ +
Sbjct: 186 PNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQL 245
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
++EM+ GC D YNA I +C R+ A G M +G+ N T++ F F
Sbjct: 246 VEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCK 305
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+R + L+ +M G N + L+ + +++ A+ L ++MV +G ++
Sbjct: 306 EGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVT 365
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
VL D LC K+ EAE L M+EK
Sbjct: 366 YTVLVDGLCKERKVAEAE-DVLRMMEKA 392
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 119/249 (47%), Gaps = 8/249 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV ++V+Y L+D CK+R+V +A ++ M + + + YT++I G +
Sbjct: 354 MVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKN 413
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA +L EMK G D + Y A I+ C +L +A L+ +M E GL PN Y
Sbjct: 414 SEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTT 473
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ S + + + +++ +G PN + C + LCK ++ A+ +N M +
Sbjct: 474 MMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCK-AGSIDEAISHFNKMRDL 532
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
G + L D LC G L EA + F EM+ KG +V + AL++ KQ
Sbjct: 533 GLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVY---TALLDGYLKQ--- 586
Query: 240 QNLSNKMAL 248
NL + AL
Sbjct: 587 GNLHDAFAL 595
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 103/223 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G K D+V+YN LI+ +CK ++E AY M+ E + +V+++++ + G
Sbjct: 249 MRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGL 308
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + +M+ G + Y I C A RL DA L+DEMV +G+ N TY +
Sbjct: 309 VREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTV 368
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + ++ M G N L+ + E AL L ++M KG
Sbjct: 369 LVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKG 428
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I + L LC++ KL EA+ +M E G +P+ + +
Sbjct: 429 LELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIY 471
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 130/277 (46%), Gaps = 7/277 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G+ + +Y CLID CK +++ A ++++M + + +V++YT ++ GL +
Sbjct: 319 MRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERK 378
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A DVL+ M++ G + Y I + + K A GL+ EM KGL + + Y
Sbjct: 379 VAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGA 438
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + L + +L +M +G PN ++ C + KV A+ + +++ G
Sbjct: 439 LIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSG 498
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS-QVSFRRIKALMELANKQEAL 239
F ++ L D LC G + EA F +M + G P+ Q + L + EA+
Sbjct: 499 FQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAV 558
Query: 240 QNLSNKMALFGPSM-----IPKREEYLAEMSASDSFS 271
Q L N+M G S+ + YL + + D+F+
Sbjct: 559 Q-LFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFA 594
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 113/253 (44%), Gaps = 37/253 (14%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G++P+ + Y ++D K +V +A +++K+ D P+VI+Y ++I GL G
Sbjct: 459 MDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGS 518
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A +M++ G P+ AY A + C L +A L +EMV KG+S + Y
Sbjct: 519 IDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTA 578
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ +L ++ L +M+ +G +++ L + + G
Sbjct: 579 LLDGYLKQGNLHDAFALKAKMIDSG--------------------LQLDLFCYTCFIS-G 617
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEAL 239
F C++ + EA + F EMI G P + + I +L N +EA+
Sbjct: 618 F--------------CNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAI 663
Query: 240 QNLSNKMALFGPS 252
+L ++M PS
Sbjct: 664 -SLQDEMERVLPS 675
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 101/223 (45%), Gaps = 4/223 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+RE+ V P+ + N ++ +DR + ++V ++ ++ +P+V ++ +I L G+
Sbjct: 148 VRELRVPPNTRTCNHILLRLARDR----SGRLVRRLFEQLPAPNVFTFNIVIDFLCKEGE 203
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR + MKE GC PD +N+ I Y L + L++EM G + TYN
Sbjct: 204 LAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNA 263
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + +++ + M G + N + V ++ V A++L+ M +G
Sbjct: 264 LINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRG 323
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
L D C G+L +A EM+ +G + V++
Sbjct: 324 MALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTY 366
>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g74580
gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 763
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 112/227 (49%), Gaps = 1/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PDI ++N LI Y ++E A +I++ M D + PDV +Y S++ GL +
Sbjct: 452 MISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSK 511
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ + K M E GC P+ +N + + C ++L +A GL++EM K ++P+A T+
Sbjct: 512 FEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGT 571
Query: 121 FFRVFYWSNDLRSSWNLYCRM-MGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
F + DL ++ L+ +M +T + ++ + V +A +L+ +MV++
Sbjct: 572 LIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDR 631
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G ++ D C G + K LEM+E G PS + R+
Sbjct: 632 CLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRV 678
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 99/219 (45%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PD +Y LID C + + +A + + + I P+VI Y ++I GL G +A
Sbjct: 351 GFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEA 410
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ EM E G P+ +N + C + DA GL+ M+ KG P+ T+N+
Sbjct: 411 AQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHG 470
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + ++ + M+ G P+ + L+ + K E ++ + MVEKG
Sbjct: 471 YSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPN 530
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ ++L + LC KL EA EM K P V+F
Sbjct: 531 LFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTF 569
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 103/219 (47%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV P++ +YN I C+ +++ A ++V + ++ PDVI+Y ++I GL + +A
Sbjct: 246 GVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEA 305
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
L +M G PD+ YN I YC ++ A ++ + V G P+ TY
Sbjct: 306 EVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDG 365
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + L+ +G G PN L+K Q + A QL N+M EKG
Sbjct: 366 LCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPE 425
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ ++L + LC MG + +A+ MI KG+ P +F
Sbjct: 426 VQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTF 464
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 107/223 (47%), Gaps = 2/223 (0%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
+P + SYN ++ V ++A+K+ +MRD I+PDV S+T + +P A
Sbjct: 108 EPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALR 167
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
+L M GC + AY + + + L +M+ G+S +T+N RV
Sbjct: 168 LLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLC 227
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSC-MFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
D++ L +++ G LPN + +F+ LC+R E ++ A+++ ++E+G +
Sbjct: 228 KKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGE-LDGAVRMVGCLIEQGPKPDV 286
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKA 228
+ + L LC K EAE +M+ +G +P ++ + A
Sbjct: 287 ITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIA 329
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 111/256 (43%), Gaps = 35/256 (13%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGL---GLV- 58
E G KPD+++YN LI CK+ + ++A + KM +E + PD +Y ++I G G+V
Sbjct: 279 EQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQ 338
Query: 59 -------------------------------GQPDKARDVLKEMKEYGCYPDAAAYNAAI 87
G+ ++A + E G P+ YN I
Sbjct: 339 LAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLI 398
Query: 88 RNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCL 147
+ + +A+ L +EM EKGL P T+N+ + + L M+ G
Sbjct: 399 KGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYF 458
Query: 148 PNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKS 207
P+ + L+ Q K+E AL++ + M++ G + + L + LC K + ++
Sbjct: 459 PDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMET 518
Query: 208 FLEMIEKGHKPSQVSF 223
+ M+EKG P+ +F
Sbjct: 519 YKTMVEKGCAPNLFTF 534
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 100/215 (46%), Gaps = 1/215 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+KP+++ YN LI + +A ++ +M ++ + P+V ++ ++ GL +G A
Sbjct: 386 GIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDA 445
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++K M G +PD +N I Y ++ +A ++D M++ G+ P+ TYN
Sbjct: 446 DGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNG 505
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
++ Y M+ GC PN + L++ R K++ AL L +M K
Sbjct: 506 LCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPD 565
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
+ L D C G L A F +M E+ +K S
Sbjct: 566 AVTFGTLIDGFCKNGDLDGAYTLFRKM-EEAYKVS 599
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 108/212 (50%), Gaps = 8/212 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G P++ ++N L++ C+ R++++A ++E+M+++ ++PD +++ ++I G G
Sbjct: 522 MVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGD 581
Query: 61 PDKARDVLKEMKE-YGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
D A + ++M+E Y YN I + + A L EMV++ L P+ TY
Sbjct: 582 LDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYR 641
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
L F + ++ + MM G +P+ + ++ +++V A + + MV+K
Sbjct: 642 LMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQK 701
Query: 180 GFGSYILVSDVLFDLLCDMGKL-VEAEKSFLE 210
G LV + + + +CD+ K V A K LE
Sbjct: 702 G-----LVPEAV-NTICDVDKKEVAAPKLVLE 727
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 107/223 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV + ++N L+ V CK V++ K+++K+ + P++ +Y I GL G+
Sbjct: 207 MLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGE 266
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A ++ + E G PD YN I C + ++A + +MV +GL P++ TYN
Sbjct: 267 LDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNT 326
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ + + + G +P+ + L+ + + AL L+N+ + KG
Sbjct: 327 LIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKG 386
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+++ + L L + G ++EA + EM EKG P +F
Sbjct: 387 IKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTF 429
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 103/223 (46%), Gaps = 7/223 (3%)
Query: 20 YCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPD 79
Y + +V++A + E+M D P V SY +I+ L G D+A V M++ G PD
Sbjct: 86 YGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPD 145
Query: 80 AAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYC 139
++ ++++C R A L++ M +G N Y FY N + L+
Sbjct: 146 VYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFG 205
Query: 140 RMMGTG---CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLC 196
+M+ +G CL L LCK+ + E +L + ++++G + ++ LC
Sbjct: 206 KMLASGVSLCLSTFNK--LLRVLCKKGDVKECE-KLLDKVIKRGVLPNLFTYNLFIQGLC 262
Query: 197 DMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEA 238
G+L A + +IE+G KP +++ I L + + QEA
Sbjct: 263 QRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEA 305
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 104/227 (45%), Gaps = 2/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G+ PD+ S+ + +CK + A +++ M + +V++Y +++GG
Sbjct: 137 MRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENF 196
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ ++ +M G + +N +R C +++ L+D+++++G+ PN TYNL
Sbjct: 197 KAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNL 256
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEK 179
F + +L + + ++ G P+ + L+ LCK + E + L MV +
Sbjct: 257 FIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYL-GKMVNE 315
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G + L C G + AE+ + + G P Q ++R +
Sbjct: 316 GLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSL 362
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 69/155 (44%), Gaps = 2/155 (1%)
Query: 28 KAYKIVEKMRDE-DISPDVISYTSIIGGLGLVGQPDKARDVLKEMKE-YGCYPDAAAYNA 85
KA ++ MR E + +Y S+I LG G+ + +VL +M+E G + Y
Sbjct: 22 KALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVG 81
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
A++NY ++++A + + M P +YN V S + +Y RM G
Sbjct: 82 AMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRG 141
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
P+ S +K + + AL+L N+M +G
Sbjct: 142 ITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQG 176
>gi|147776740|emb|CAN72416.1| hypothetical protein VITISV_027905 [Vitis vinifera]
Length = 422
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 102/211 (48%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV PD SYN L+ +C + + AY + +M D++PDV SY ++ GL Q ++A
Sbjct: 148 GVSPDTKSYNILMSAFCFNGDLSIAYTLFNQMFKRDVAPDVESYRILMQGLCRKSQVNRA 207
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
D+L++M G PDA +Y + + C K+L++A L+ M KG +P+ YN
Sbjct: 208 VDLLEDMLNKGYVPDALSYTTLLNSLCRKKKLKEAYKLLCRMKVKGCNPDIVHYNTVILG 267
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
F + + M GC PN S LV Q + A +M+ KGF +
Sbjct: 268 FCREGRXLDACKVLEDMPSNGCSPNLMSYGTLVSGLCDQGLYDEAKNYVEEMLSKGFSPH 327
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
V L + C++GKL EA + EM+ G
Sbjct: 328 FSVFHALINGFCNVGKLEEACEVLXEMLRHG 358
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 95/213 (44%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + V PD+ SY L+ C+ QV +A ++E M ++ PD +SYT+++ L +
Sbjct: 179 MFKRDVAPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGYVPDALSYTTLLNSLCRKKK 238
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A +L MK GC PD YN I +C R DA ++++M G SPN +Y
Sbjct: 239 LKEAYKLLCRMKVKGCNPDIVHYNTVILGFCREGRXLDACKVLEDMPSNGCSPNLMSYGT 298
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ N M+ G P+ L+ K+E A ++ +M+ G
Sbjct: 299 LVSGLCDQGLYDEAKNYVEEMLSKGFSPHFSVFHALINGFCNVGKLEEACEVLXEMLRHG 358
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIE 213
+ + +C++ KLV E F E ++
Sbjct: 359 EAXHTETWVAIIPRICEVDKLVRMENIFDEXLK 391
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 93/228 (40%), Gaps = 3/228 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQ-VEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVG 59
M + KP N L+ + R + A+ + + +SPD SY ++ G
Sbjct: 108 MLQFHSKPLPKHLNXLLQLLVSHRNYIRPAFDLFKSAHRYGVSPDTKSYNILMSAFCFNG 167
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
A + +M + PD +Y ++ C ++ A L+++M+ KG P+A +Y
Sbjct: 168 DLSIAYTLFNQMFKRDVAPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGYVPDALSYT 227
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPN-TQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
L+ ++ L CRM GC P+ ++ C+ ++ A ++ DM
Sbjct: 228 TLLNSLCRKKKLKEAYKLLCRMKVKGCNPDIVHYNTVILGFCREGRXLD-ACKVLEDMPS 286
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G ++ L LCD G EA+ EM+ KG P F +
Sbjct: 287 NGCSPNLMSYGTLVSGLCDQGLYDEAKNYVEEMLSKGFSPHFSVFHAL 334
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 94/221 (42%), Gaps = 11/221 (4%)
Query: 12 SYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEM 71
S++ LI RQ ++ +++ E S + ++ II G PD+A M
Sbjct: 49 SFHILILKLGWARQFSLMQDLLMRLKSEQYSINPSLFSDIIEIYGEANLPDQALKTFHSM 108
Query: 72 KEYGCYPDAAAYNAAI------RNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
++ P N + RNY +R A L G+SP+ +YN+ F
Sbjct: 109 LQFHSKPLPKHLNXLLQLLVSHRNY-----IRPAFDLFKSAHRYGVSPDTKSYNILMSAF 163
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
++ DL ++ L+ +M P+ +S L++ R+ +V A+ L DM+ KG+
Sbjct: 164 CFNGDLSIAYTLFNQMFKRDVAPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGYVPDA 223
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
L L + LC KL EA K M KG P V + +
Sbjct: 224 LSYTTLLNSLCRKKKLKEAYKLLCRMKVKGCNPDIVHYNTV 264
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 54/115 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P+++SY L+ C ++A VE+M + SP + ++I G VG+
Sbjct: 284 MPSNGCSPNLMSYGTLVSGLCDQGLYDEAKNYVEEMLSKGFSPHFSVFHALINGFCNVGK 343
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNA 115
++A +VL EM +G + A I C +L + DE ++ ++PN
Sbjct: 344 LEEACEVLXEMLRHGEAXHTETWVAIIPRICEVDKLVRMENIFDEXLKLEITPNT 398
>gi|115455091|ref|NP_001051146.1| Os03g0728200 [Oryza sativa Japonica Group]
gi|50428716|gb|AAT77067.1| putative PPR repeat containing protein [Oryza sativa Japonica
Group]
gi|108710874|gb|ABF98669.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|113549617|dbj|BAF13060.1| Os03g0728200 [Oryza sativa Japonica Group]
Length = 601
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 101/215 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ V PD+V +N L+ + D + E A+++ +M P+ +SYT+++ GLG G+
Sbjct: 221 MKAAEVAPDVVVFNTLLAGFVADGRFEDAFELAREMERRGCPPNAVSYTTLMQGLGARGR 280
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A V EM+ GC PD+ Y + +C A R+ +D M +GL +A Y
Sbjct: 281 VDEAMRVFVEMRRKGCAPDSVTYGTLVTAFCKAGRISQGYEFLDVMAREGLRVDAGVYLG 340
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
FF L L RM C P+ +++L + + + A+ LWN+M
Sbjct: 341 FFVAHEKKEQLEECLELMERMRECRCPPDLSIYNVVIRLACKLGETKQAVALWNEMETNE 400
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
+ ++ L G LVEA F +M+ +G
Sbjct: 401 LSPGVDTFAIMVTGLVGQGVLVEACGYFKDMVGRG 435
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 100/211 (47%)
Query: 13 YNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMK 72
Y L+ +C+ ++++A ++ +M+ +++PDV+ + +++ G G+ + A ++ +EM+
Sbjct: 198 YTALLYGWCRMGKLDEAKHVLARMKAAEVAPDVVVFNTLLAGFVADGRFEDAFELAREME 257
Query: 73 EYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLR 132
GC P+A +Y ++ R+ +A + EM KG +P++ TY F + +
Sbjct: 258 RRGCPPNAVSYTTLMQGLGARGRVDEAMRVFVEMRRKGCAPDSVTYGTLVTAFCKAGRIS 317
Query: 133 SSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLF 192
+ M G + + +++E++E L+L M E + + +V+
Sbjct: 318 QGYEFLDVMAREGLRVDAGVYLGFFVAHEKKEQLEECLELMERMRECRCPPDLSIYNVVI 377
Query: 193 DLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
L C +G+ +A + EM P +F
Sbjct: 378 RLACKLGETKQAVALWNEMETNELSPGVDTF 408
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 100/282 (35%), Gaps = 81/282 (28%)
Query: 1 MREMGVKPDIVSYNCLIDVYCK-----------------------------------DRQ 25
MR G PD V+Y L+ +CK Q
Sbjct: 291 MRRKGCAPDSVTYGTLVTAFCKAGRISQGYEFLDVMAREGLRVDAGVYLGFFVAHEKKEQ 350
Query: 26 VEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNA 85
+E+ +++E+MR+ PD+ + YN
Sbjct: 351 LEECLELMERMRECRCPPDL-----------------------------------SIYNV 375
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
IR C + A L +EM LSP T+ + L + + M+G G
Sbjct: 376 VIRLACKLGETKQAVALWNEMETNELSPGVDTFAIMVTGLVGQGVLVEACGYFKDMVGRG 435
Query: 146 CLPNTQSCMF--LVKLCKRQEKVEIALQLWNDMVEKG----FGSYILVSDVLFDLLCDMG 199
Q + L+ R +K+E+A +W ++ KG FG++ + L+
Sbjct: 436 LFVAPQYGVLKDLLNSLVRDQKLELAKDVWGCIMTKGCELNFGAWTIWIHALY----AKK 491
Query: 200 KLVEAEKSFLEMIEKGHKPSQVSFRRI-KALMELANKQEALQ 240
+ EA L+M++ G P +F ++ K L +L N+Q A +
Sbjct: 492 HVKEACMYCLDMLDAGLMPQPDTFAKLMKGLKKLYNRQIAAE 533
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 78/175 (44%), Gaps = 4/175 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MRE PD+ YN +I + CK + ++A + +M ++SP V ++ ++ GL G
Sbjct: 361 MRECRCPPDLSIYNVVIRLACKLGETKQAVALWNEMETNELSPGVDTFAIMVTGLVGQGV 420
Query: 61 PDKARDVLKEMKEYGCY--PDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
+A K+M G + P + + ++L A + ++ KG N +
Sbjct: 421 LVEACGYFKDMVGRGLFVAPQYGVLKDLLNSLVRDQKLELAKDVWGCIMTKGCELNFGAW 480
Query: 119 NLFFRVFYWSNDLRSSWNLYC-RMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQL 172
++ Y ++ + +YC M+ G +P + L+K K+ +IA ++
Sbjct: 481 TIWIHALYAKKHVKEAC-MYCLDMLDAGLMPQPDTFAKLMKGLKKLYNRQIAAEI 534
>gi|222625312|gb|EEE59444.1| hypothetical protein OsJ_11623 [Oryza sativa Japonica Group]
Length = 589
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 101/215 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ V PD+V +N L+ + D + E A+++ +M P+ +SYT+++ GLG G+
Sbjct: 209 MKAAEVAPDVVVFNTLLAGFVADGRFEDAFELAREMERRGCPPNAVSYTTLMQGLGARGR 268
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A V EM+ GC PD+ Y + +C A R+ +D M +GL +A Y
Sbjct: 269 VDEAMRVFVEMRRKGCAPDSVTYGTLVTAFCKAGRISQGYEFLDVMAREGLRVDAGVYLG 328
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
FF L L RM C P+ +++L + + + A+ LWN+M
Sbjct: 329 FFVAHEKKEQLEECLELMERMRECRCPPDLSIYNVVIRLACKLGETKQAVALWNEMETNE 388
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
+ ++ L G LVEA F +M+ +G
Sbjct: 389 LSPGVDTFAIMVTGLVGQGVLVEACGYFKDMVGRG 423
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 100/212 (47%)
Query: 12 SYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEM 71
Y L+ +C+ ++++A ++ +M+ +++PDV+ + +++ G G+ + A ++ +EM
Sbjct: 185 HYTALLYGWCRMGKLDEAKHVLARMKAAEVAPDVVVFNTLLAGFVADGRFEDAFELAREM 244
Query: 72 KEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDL 131
+ GC P+A +Y ++ R+ +A + EM KG +P++ TY F + +
Sbjct: 245 ERRGCPPNAVSYTTLMQGLGARGRVDEAMRVFVEMRRKGCAPDSVTYGTLVTAFCKAGRI 304
Query: 132 RSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVL 191
+ M G + + +++E++E L+L M E + + +V+
Sbjct: 305 SQGYEFLDVMAREGLRVDAGVYLGFFVAHEKKEQLEECLELMERMRECRCPPDLSIYNVV 364
Query: 192 FDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
L C +G+ +A + EM P +F
Sbjct: 365 IRLACKLGETKQAVALWNEMETNELSPGVDTF 396
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 100/282 (35%), Gaps = 81/282 (28%)
Query: 1 MREMGVKPDIVSYNCLIDVYCK-----------------------------------DRQ 25
MR G PD V+Y L+ +CK Q
Sbjct: 279 MRRKGCAPDSVTYGTLVTAFCKAGRISQGYEFLDVMAREGLRVDAGVYLGFFVAHEKKEQ 338
Query: 26 VEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNA 85
+E+ +++E+MR+ PD+ + YN
Sbjct: 339 LEECLELMERMRECRCPPDL-----------------------------------SIYNV 363
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
IR C + A L +EM LSP T+ + L + + M+G G
Sbjct: 364 VIRLACKLGETKQAVALWNEMETNELSPGVDTFAIMVTGLVGQGVLVEACGYFKDMVGRG 423
Query: 146 CLPNTQSCMF--LVKLCKRQEKVEIALQLWNDMVEKG----FGSYILVSDVLFDLLCDMG 199
Q + L+ R +K+E+A +W ++ KG FG++ + L+
Sbjct: 424 LFVAPQYGVLKDLLNSLVRDQKLELAKDVWGCIMTKGCELNFGAWTIWIHALY----AKK 479
Query: 200 KLVEAEKSFLEMIEKGHKPSQVSFRRI-KALMELANKQEALQ 240
+ EA L+M++ G P +F ++ K L +L N+Q A +
Sbjct: 480 HVKEACMYCLDMLDAGLMPQPDTFAKLMKGLKKLYNRQIAAE 521
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 78/175 (44%), Gaps = 4/175 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MRE PD+ YN +I + CK + ++A + +M ++SP V ++ ++ GL G
Sbjct: 349 MRECRCPPDLSIYNVVIRLACKLGETKQAVALWNEMETNELSPGVDTFAIMVTGLVGQGV 408
Query: 61 PDKARDVLKEMKEYGCY--PDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
+A K+M G + P + + ++L A + ++ KG N +
Sbjct: 409 LVEACGYFKDMVGRGLFVAPQYGVLKDLLNSLVRDQKLELAKDVWGCIMTKGCELNFGAW 468
Query: 119 NLFFRVFYWSNDLRSSWNLYC-RMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQL 172
++ Y ++ + +YC M+ G +P + L+K K+ +IA ++
Sbjct: 469 TIWIHALYAKKHVKEAC-MYCLDMLDAGLMPQPDTFAKLMKGLKKLYNRQIAAEI 522
>gi|357494871|ref|XP_003617724.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519059|gb|AET00683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 861
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 120/243 (49%), Gaps = 1/243 (0%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E G+ D +N LI+ +CK +Q ++ +I+ M +P + +Y II GL + D
Sbjct: 229 EKGLCVDNTVFNALINGFCKQKQYDRVSEILHIMIAMKCNPSIYTYQEIINGLLKRRKND 288
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
+A V ++K+ G +PD Y I+ +C L +A L EM++KGL PN TYN+
Sbjct: 289 EAFRVFNDLKDRGYFPDRVMYTTVIKGFCDMGLLAEARKLWFEMIQKGLVPNEYTYNVMI 348
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
+ D + LY M G G N S ++ K + AL L+++M KG
Sbjct: 349 YGYCKVRDFAEARKLYDDMCGRGYAENVVSYSTMISGLYLHGKTDEALSLFHEMSRKGIA 408
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQN 241
++ + L LC G+L +A +++ +G +PS SF IK L ++ + + A++
Sbjct: 409 RDLISYNSLIKGLCQEGELAKATNLLNKLLIQGLEPSVSSFTPLIKCLCKVGDTEGAMRL 468
Query: 242 LSN 244
L +
Sbjct: 469 LKD 471
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 111/271 (40%), Gaps = 37/271 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M M P I +Y +I+ K R+ ++A+++ ++D PD + YT++I G +G
Sbjct: 262 MIAMKCNPSIYTYQEIINGLLKRRKNDEAFRVFNDLKDRGYFPDRVMYTTVIKGFCDMGL 321
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMD---------------- 104
+AR + EM + G P+ YN I YC + +A L D
Sbjct: 322 LAEARKLWFEMIQKGLVPNEYTYNVMIYGYCKVRDFAEARKLYDDMCGRGYAENVVSYST 381
Query: 105 -------------------EMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
EM KG++ + +YN + +L + NL +++ G
Sbjct: 382 MISGLYLHGKTDEALSLFHEMSRKGIARDLISYNSLIKGLCQEGELAKATNLLNKLLIQG 441
Query: 146 CLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEA 204
P+ S L+K LCK + E A++L DM ++ D + L G +
Sbjct: 442 LEPSVSSFTPLIKCLCKVGD-TEGAMRLLKDMHDRHLEPIASTHDYMIIGLSKKGDFAQG 500
Query: 205 EKSFLEMIEKGHKPSQVSFRRIKALMELANK 235
+ L+M+ KP+ +F + ++ N+
Sbjct: 501 MEWLLKMLSWKLKPNMQTFEHLIDCLKRENR 531
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 83/177 (46%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G ++VSY+ +I + ++A + +M + I+ D+ISY S+I GL G+ KA
Sbjct: 371 GYAENVVSYSTMISGLYLHGKTDEALSLFHEMSRKGIARDLISYNSLIKGLCQEGELAKA 430
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++L ++ G P +++ I+ C A L+ +M ++ L P A+T++
Sbjct: 431 TNLLNKLLIQGLEPSVSSFTPLIKCLCKVGDTEGAMRLLKDMHDRHLEPIASTHDYMIIG 490
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
D +M+ PN Q+ L+ KR+ +++ L + + M +G+
Sbjct: 491 LSKKGDFAQGMEWLLKMLSWKLKPNMQTFEHLIDCLKRENRLDDILIVLDLMFREGY 547
>gi|125544731|gb|EAY90870.1| hypothetical protein OsI_12477 [Oryza sativa Indica Group]
Length = 601
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 101/215 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ V PD+V +N L+ + D + E A+++ +M P+ +SYT+++ GLG G+
Sbjct: 221 MKAAEVAPDVVVFNTLLAGFVADGRFEDAFELAREMERRGCPPNAVSYTTLMQGLGARGR 280
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A V EM+ GC PD+ Y + +C A R+ +D M +GL +A Y
Sbjct: 281 VDEAMRVFVEMRRKGCAPDSVTYGTLVTAFCKAGRISQGYEFLDVMAREGLRVDAGVYLG 340
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
FF L L RM C P+ +++L + + + A+ LWN+M
Sbjct: 341 FFVAHEKKEQLEECLELMERMRECRCPPDLSIYNVVIRLACKLGETKQAVALWNEMETNE 400
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
+ ++ L G LVEA F +M+ +G
Sbjct: 401 LSPGVDTFAIMVTGLVGQGVLVEACGYFKDMVGRG 435
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 100/211 (47%)
Query: 13 YNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMK 72
Y L+ +C+ ++++A ++ +M+ +++PDV+ + +++ G G+ + A ++ +EM+
Sbjct: 198 YTALLYGWCRMGKLDEAKHVLARMKAAEVAPDVVVFNTLLAGFVADGRFEDAFELAREME 257
Query: 73 EYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLR 132
GC P+A +Y ++ R+ +A + EM KG +P++ TY F + +
Sbjct: 258 RRGCPPNAVSYTTLMQGLGARGRVDEAMRVFVEMRRKGCAPDSVTYGTLVTAFCKAGRIS 317
Query: 133 SSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLF 192
+ M G + + +++E++E L+L M E + + +V+
Sbjct: 318 QGYEFLDVMAREGLRVDAGVYLGFFVAHEKKEQLEECLELMERMRECRCPPDLSIYNVVI 377
Query: 193 DLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
L C +G+ +A + EM P +F
Sbjct: 378 RLACKLGETKQAVALWNEMETNELSPGVDTF 408
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 78/175 (44%), Gaps = 4/175 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MRE PD+ YN +I + CK + ++A + +M ++SP V ++ ++ GL G
Sbjct: 361 MRECRCPPDLSIYNVVIRLACKLGETKQAVALWNEMETNELSPGVDTFAIMVTGLVGQGV 420
Query: 61 PDKARDVLKEMKEYGCY--PDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
+A K+M G + P + + ++L A + ++ KG N +
Sbjct: 421 LVEACGYFKDMVGRGLFVAPQYGVLKDLLNSLVRDQKLELAKDVWGCIMTKGCELNVGAW 480
Query: 119 NLFFRVFYWSNDLRSSWNLYC-RMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQL 172
++ Y ++ + +YC M+ G +P + L+K K+ +IA ++
Sbjct: 481 TIWIHALYAKKHVKEAC-MYCLDMLDAGLMPQPDTFAKLMKGLKKLYNRQIAAEI 534
Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 57/278 (20%), Positives = 96/278 (34%), Gaps = 73/278 (26%)
Query: 1 MREMGVKPDIVSYNCLIDVYCK-----------------------------------DRQ 25
MR G PD V+Y L+ +CK Q
Sbjct: 291 MRRKGCAPDSVTYGTLVTAFCKAGRISQGYEFLDVMAREGLRVDAGVYLGFFVAHEKKEQ 350
Query: 26 VEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNA 85
+E+ +++E+MR+ PD+ + YN
Sbjct: 351 LEECLELMERMRECRCPPDL-----------------------------------SIYNV 375
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
IR C + A L +EM LSP T+ + L + + M+G G
Sbjct: 376 VIRLACKLGETKQAVALWNEMETNELSPGVDTFAIMVTGLVGQGVLVEACGYFKDMVGRG 435
Query: 146 CLPNTQSCMF--LVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVE 203
Q + L+ R +K+E+A +W ++ KG + + L + E
Sbjct: 436 LFVAPQYGVLKDLLNSLVRDQKLELAKDVWGCIMTKGCELNVGAWTIWIHALYAKKHVKE 495
Query: 204 AEKSFLEMIEKGHKPSQVSFRRI-KALMELANKQEALQ 240
A L+M++ G P +F ++ K L +L N+Q A +
Sbjct: 496 ACMYCLDMLDAGLMPQPDTFAKLMKGLKKLYNRQIAAE 533
>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 906
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 116/235 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E G+ D+++YN +ID +CK +V+KAY+++E+M+ + + P V++Y S++ GL + +
Sbjct: 613 MKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDR 672
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + +E K G + Y++ I + R+ +A +++E+++KGL+PN+ T+N
Sbjct: 673 LDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNC 732
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ + + M C PN + ++ K A W +M ++G
Sbjct: 733 LLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQG 792
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANK 235
+ + L G ++EA F G P + + + ANK
Sbjct: 793 LKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIEGLSSANK 847
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 113/226 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E G+ P+I++ N +ID CK +++++A I + + SPD ++ S+I GLG G+
Sbjct: 438 MKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGR 497
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A + ++M + P+ Y + I+N+ R D + EMV +G SP+ N
Sbjct: 498 VDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNS 557
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + ++ L+ + G +P+ +S L+ + +L+ +M E+G
Sbjct: 558 YMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQG 617
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+L + + D C GK+ +A + EM KG +P+ V++ +
Sbjct: 618 LHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSV 663
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 105/219 (47%), Gaps = 1/219 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E+G + ++ + L+ V+ ++ +++ A ++++M+ + D++ Y I G VG+
Sbjct: 229 MQEIGYEANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGK 288
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A EMK G PD Y I C A+RL +A L +E+ P YN
Sbjct: 289 VDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNT 348
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + +++L R GC+P+ + ++ R+ KVE AL++ ++M +
Sbjct: 349 MIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQDA 408
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
+ ++L D+LC G+L A K M E G P+
Sbjct: 409 -APNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPN 446
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 109/252 (43%), Gaps = 34/252 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G+ PD V+Y LI V CK R++++A ++ E++ P V +Y ++I G G G+
Sbjct: 299 MKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGK 358
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNA-------------AIRNY----------------- 90
D+A +L+ K GC P AYN A+R +
Sbjct: 359 FDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQDAAPNLTTYNIL 418
Query: 91 ----CIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGC 146
C A L A + D M E GL PN T N+ + L + +++ + C
Sbjct: 419 IDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVC 478
Query: 147 LPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEK 206
P++++ L+ R+ +V+ A L+ M++ ++V L G+ + K
Sbjct: 479 SPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHK 538
Query: 207 SFLEMIEKGHKP 218
+ EM+ +G P
Sbjct: 539 IYKEMVHRGCSP 550
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 111/239 (46%), Gaps = 1/239 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
++ G+ PD+ SY+ LI K + YK+ +M+++ + DV++Y ++I G G+
Sbjct: 578 IKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGK 637
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA +L+EMK G P Y + + RL +A L +E G+ N Y+
Sbjct: 638 VDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSS 697
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + ++ + +M G PN+ + L+ + E+++ A + +M
Sbjct: 698 LIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLK 757
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEA 238
+ ++ + LC + K +A + EM ++G KP+ +++ I L + N EA
Sbjct: 758 CSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEA 816
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 109/241 (45%), Gaps = 4/241 (1%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P++V Y LI + K + E +KI ++M SPD++ S + + G+ +K R +
Sbjct: 515 PNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRAL 574
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
+E+K G PD +Y+ I A R+ L EM E+GL + YN F
Sbjct: 575 FEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCK 634
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
S + ++ L M G P + +V + ++++ A L+ + G +++
Sbjct: 635 SGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVI 694
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALM---ELANKQEALQNLS 243
L D +G++ EA E+++KG P+ ++ + AL+ E+ Q QN+
Sbjct: 695 YSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMK 754
Query: 244 N 244
N
Sbjct: 755 N 755
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 84/169 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+ + G+ P+ ++NCL+D K ++++A + M++ SP+ ++Y+ +I GL ++ +
Sbjct: 718 LMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRK 777
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA +EM++ G P+ Y I A + +A GL D G P++ YN
Sbjct: 778 FNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNA 837
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIA 169
+N ++ ++ GC N+++C+ L+ + + +E A
Sbjct: 838 MIEGLSSANKAMDAYIVFEETRLKGCRVNSKTCVVLLDALHKADCLEQA 886
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 76/161 (47%)
Query: 16 LIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYG 75
L+ + K ++++A+ ++E MR P +YT++IG L +PD + +M+E G
Sbjct: 174 LVASFVKSHKLKEAFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIG 233
Query: 76 CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSW 135
+ + +R + R+ A L+DEM + + YN+ F + +W
Sbjct: 234 YEANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAW 293
Query: 136 NLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDM 176
+ M G +P+ + L+ + + +++ A++L+ ++
Sbjct: 294 KFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEEL 334
>gi|299473436|emb|CBN77833.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1139
Score = 106 bits (264), Expect = 1e-20, Method: Composition-based stats.
Identities = 57/223 (25%), Positives = 111/223 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+ PD+ + N LI+ + K ++A K+ ++M ++P VI++ ++I G G
Sbjct: 155 MLEAGITPDVQAINSLINAFAKAGSPDQALKVFDQMSRYGVTPSVITFNTLIDACGRAGD 214
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+AR V + + G P+ ++A I ++ + ++ +A + EM +GL PN TY+
Sbjct: 215 IDRARQVFSRLSQAGLSPNDRTFSALIHSHAVQGQVDEAFSWLQEMRARGLEPNRVTYSA 274
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L ++ M GTG PN + L+ C + +++E + +L+ +M E+G
Sbjct: 275 LINACGRAGQLARAFQTLDEMFGTGIEPNVVTWTTLIDACGKGKELEWSFKLFKEMRERG 334
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ L D +L A M++ G +P++V++
Sbjct: 335 TVPNGVTCSALMDACLKADELDLAFAVLEHMLDVGIEPTEVTY 377
Score = 87.4 bits (215), Expect = 6e-15, Method: Composition-based stats.
Identities = 64/235 (27%), Positives = 104/235 (44%), Gaps = 5/235 (2%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
++P IV+++ LI R+V A + +M + I+PDV + S+I G PD+A
Sbjct: 125 LRPTIVTFSTLISRAGACRRVRLAERFFREMLEAGITPDVQAINSLINAFAKAGSPDQAL 184
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
V +M YG P +N I A + A + + + GLSPN T++
Sbjct: 185 KVFDQMSRYGVTPSVITFNTLIDACGRAGDIDRARQVFSRLSQAGLSPNDRTFSALIHSH 244
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ +++ M G PN + L+ C R ++ A Q ++M G +
Sbjct: 245 AVQGQVDEAFSWLQEMRARGLEPNRVTYSALINACGRAGQLARAFQTLDEMFGTGIEPNV 304
Query: 186 LVSDVLFDLLCDMGKLVE-AEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
+ L D C GK +E + K F EM E+G P+ V+ ALM+ K + L
Sbjct: 305 VTWTTLID-ACGKGKELEWSFKLFKEMRERGTVPNGVT---CSALMDACLKADEL 355
Score = 64.7 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 39/162 (24%), Positives = 75/162 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+ + G+ P+ +++ LI + QV++A+ +++MR + P+ ++Y+++I G GQ
Sbjct: 225 LSQAGLSPNDRTFSALIHSHAVQGQVDEAFSWLQEMRARGLEPNRVTYSALINACGRAGQ 284
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A L EM G P+ + I K L + L EM E+G PN T +
Sbjct: 285 LARAFQTLDEMFGTGIEPNVVTWTTLIDACGKGKELEWSFKLFKEMRERGTVPNGVTCSA 344
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKR 162
+++L ++ + M+ G P + L+ C R
Sbjct: 345 LMDACLKADELDLAFAVLEHMLDVGIEPTEVTYTSLLTQCAR 386
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 43/190 (22%), Positives = 83/190 (43%)
Query: 34 EKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIA 93
E M + P +++++++I G + A +EM E G PD A N+ I + A
Sbjct: 118 EAMLACQLRPTIVTFSTLISRAGACRRVRLAERFFREMLEAGITPDVQAINSLINAFAKA 177
Query: 94 KRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSC 153
A + D+M G++P+ T+N + D+ + ++ R+ G PN ++
Sbjct: 178 GSPDQALKVFDQMSRYGVTPSVITFNTLIDACGRAGDIDRARQVFSRLSQAGLSPNDRTF 237
Query: 154 MFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIE 213
L+ Q +V+ A +M +G + L + G+L A ++ EM
Sbjct: 238 SALIHSHAVQGQVDEAFSWLQEMRARGLEPNRVTYSALINACGRAGQLARAFQTLDEMFG 297
Query: 214 KGHKPSQVSF 223
G +P+ V++
Sbjct: 298 TGIEPNVVTW 307
Score = 56.2 bits (134), Expect = 1e-05, Method: Composition-based stats.
Identities = 39/173 (22%), Positives = 79/173 (45%), Gaps = 12/173 (6%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDE----DISPDVISYTSIIGGLG 56
MR GV+PD+ +YN L++ + ++A +V M D+ + PD ++YTS+I
Sbjct: 885 MRSRGVRPDLRAYNALVNTCADLGEFDRALGVVRLMVDDGEGGGLQPDAVTYTSLIKAAA 944
Query: 57 LVGQP--DKARDVLKEMKEYGCY------PDAAAYNAAIRNYCIAKRLRDASGLMDEMVE 108
P ++A ++ M++ + P Y +R +A+ A + + +
Sbjct: 945 RAVPPRVEEAEEIFATMQQRTNHFSTFARPTEVTYAHLMRASVMAEDYGRALEIWRQQLS 1004
Query: 109 KGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCK 161
G++P + + D+ ++ +Y M G PN+++ + LV LC+
Sbjct: 1005 AGVAPGPRSTRAALAACGGAGDVDTALQVYDVMREGGIRPNSRALLDLVNLCR 1057
Score = 50.8 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 36/145 (24%), Positives = 70/145 (48%), Gaps = 2/145 (1%)
Query: 16 LIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKE-- 73
L+ ++ + QV+ A+K++E M + SPD ++ ++ + G DKA ++++ +
Sbjct: 548 LLQLFGQADQVDAAFKVLEGMVERRDSPDGETWLLLLNAVDTAGALDKAVELMERSRAEG 607
Query: 74 YGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRS 133
+G + Y+A + AK+L A ++ M E G+ P TY V S D ++
Sbjct: 608 HGSEINELTYSALLGACGRAKKLARAFRIVQSMRETGVKPTEGTYLALMEVCRHSRDSKA 667
Query: 134 SWNLYCRMMGTGCLPNTQSCMFLVK 158
+ ++ M G P +S L+K
Sbjct: 668 AVEVFEAMETEGVRPGVRSYTSLLK 692
Score = 50.4 bits (119), Expect = 8e-04, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 43/73 (58%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MRE G P+ V+ + L+D K +++ A+ ++E M D I P ++YTS++ +GQ
Sbjct: 330 MRERGTVPNGVTCSALMDACLKADELDLAFAVLEHMLDVGIEPTEVTYTSLLTQCARLGQ 389
Query: 61 PDKARDVLKEMKE 73
D+A VL E+ +
Sbjct: 390 ADRAGIVLDELNK 402
Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 49/220 (22%), Positives = 88/220 (40%), Gaps = 22/220 (10%)
Query: 28 KAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKE----YGCYPDAAAY 83
+ + + ++MR + PD+ +Y +++ +G+ D+A V++ M + G PDA Y
Sbjct: 877 RVFLVFQEMRSRGVRPDLRAYNALVNTCADLGEFDRALGVVRLMVDDGEGGGLQPDAVTY 936
Query: 84 NAAIR--NYCIAKRLRDASGLMDEMVEKG------LSPNATTYNLFFRVFYWSNDLRSSW 135
+ I+ + R+ +A + M ++ P TY R + D +
Sbjct: 937 TSLIKAAARAVPPRVEEAEEIFATMQQRTNHFSTFARPTEVTYAHLMRASVMAEDYGRAL 996
Query: 136 NLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDL- 194
++ + + G P +S + C V+ ALQ+++ M E G S L DL
Sbjct: 997 EIWRQQLSAGVAPGPRSTRAALAACGGAGDVDTALQVYDVMREGGIRPN---SRALLDLV 1053
Query: 195 -LCDMGKLVEAEKSFLEMIEK-----GHKPSQVSFRRIKA 228
LC L + K + S VS RR A
Sbjct: 1054 NLCRANGLQSVAARIMRERSKTDATTNRRRSNVSMRRNSA 1093
Score = 47.0 bits (110), Expect = 0.008, Method: Composition-based stats.
Identities = 43/203 (21%), Positives = 78/203 (38%), Gaps = 4/203 (1%)
Query: 54 GLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSP 113
LG G+ D + M P ++ I +R+R A EM+E G++P
Sbjct: 103 ALGDAGRIDDCVAAYEAMLACQLRPTIVTFSTLISRAGACRRVRLAERFFREMLEAGITP 162
Query: 114 NATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLW 173
+ N F + + ++ +M G P+ + L+ C R ++ A Q++
Sbjct: 163 DVQAINSLINAFAKAGSPDQALKVFDQMSRYGVTPSVITFNTLIDACGRAGDIDRARQVF 222
Query: 174 NDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMEL 232
+ + + G L G++ EA EM +G +P++V++ I A
Sbjct: 223 SRLSQAGLSPNDRTFSALIHSHAVQGQVDEAFSWLQEMRARGLEPNRVTYSALINACGRA 282
Query: 233 ANKQEALQNLSNKMALFGPSMIP 255
A Q L +FG + P
Sbjct: 283 GQLARAFQTLDE---MFGTGIEP 302
Score = 45.4 bits (106), Expect = 0.026, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 58/110 (52%), Gaps = 2/110 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G++P++V++ LID K +++E ++K+ ++MR+ P+ ++ ++++ + D A
Sbjct: 299 GIEPNVVTWTTLIDACGKGKELEWSFKLFKEMRERGTVPNGVTCSALMDACLKADELDLA 358
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPN 114
VL+ M + G P Y + + + A ++DE+ ++ PN
Sbjct: 359 FAVLEHMLDVGIEPTEVTYTSLLTQCARLGQADRAGIVLDELNKR--RPN 406
Score = 41.6 bits (96), Expect = 0.36, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 31/55 (56%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGL 55
MRE GVKP +Y L++V R + A ++ E M E + P V SYTS++ +
Sbjct: 640 MRETGVKPTEGTYLALMEVCRHSRDSKAAVEVFEAMETEGVRPGVRSYTSLLKAI 694
>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 529
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 105/211 (49%), Gaps = 2/211 (0%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ P + YN LI+ CK+ V++A ++ M E I P V++Y++++ G LVG+ A+
Sbjct: 216 INPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAK 275
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+ M + G P+ +YN I C KR+ +A L+ EM+ K + P+ TYN
Sbjct: 276 QIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGL 335
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEKGFGSY 184
S + S+ NL M G + + L+ LCK Q ++ A L+ M E+G
Sbjct: 336 CKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQN-LDKATALFMKMKERGIQPT 394
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
+ L D LC G+L A++ F ++ KG
Sbjct: 395 MYTYTALIDGLCKGGRLKNAQELFQHLLVKG 425
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 117/244 (47%), Gaps = 6/244 (2%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+P++V YN +ID CKD+ V +AY + +M I PD I+YT++I G L+GQ A
Sbjct: 146 TRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAF 205
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+L EM P YN I C +++A L+ M ++G+ P TY+ +
Sbjct: 206 SLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGY 265
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+++++ ++ M+ G PN S ++ + ++V+ A+ L +M+ K
Sbjct: 266 CLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDT 325
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNK 245
+ + L D LC G++ A EM +G V++ +L++ K QNL
Sbjct: 326 VTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYT---SLLDALCKN---QNLDKA 379
Query: 246 MALF 249
ALF
Sbjct: 380 TALF 383
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 108/226 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+KP +V+Y+ L+D YC +V+ A +I M ++P+V SY +I GL +
Sbjct: 246 MTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKR 305
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A ++L+EM PD YN+ I C + R+ A LM+EM +G + TY
Sbjct: 306 VDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTS 365
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ +L + L+ +M G P + L+ + +++ A +L+ ++ KG
Sbjct: 366 LLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKG 425
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ V+ LC G EA +M + G P+ V+F I
Sbjct: 426 CCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEII 471
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 107/215 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +MGV P++ SYN +I+ CK ++V++A ++ +M +++ PD ++Y S+I GL G+
Sbjct: 281 MVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGR 340
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +++ EM G D Y + + C + L A+ L +M E+G+ P TY
Sbjct: 341 ITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTA 400
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
L+++ L+ ++ GC + + ++ ++ + AL + + M + G
Sbjct: 401 LIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNG 460
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
+ +++ L + + +AEK EMI KG
Sbjct: 461 CIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKG 495
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 118/259 (45%), Gaps = 4/259 (1%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
++G +PD ++ N L+ C +V+K+ +K+ + D +SY +++ GL +G+
Sbjct: 73 KLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGETR 132
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
A +L+ +++ P+ YN I C K + +A L EM +G+ P+A TY
Sbjct: 133 CAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLI 192
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
F L +++L M+ P L+ ++ V+ A L M ++G
Sbjct: 193 YGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIK 252
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEALQN 241
++ L D C +G++ A++ F M++ G P+ S+ I L + EA+ N
Sbjct: 253 PGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAM-N 311
Query: 242 LSNKMALFGPSMIPKREEY 260
L +M +M+P Y
Sbjct: 312 LLREM--LHKNMVPDTVTY 328
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 85/181 (46%), Gaps = 4/181 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G D+V+Y L+D CK++ ++KA + KM++ I P + +YT++I GL G+
Sbjct: 351 MHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGR 410
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A+++ + + GC D Y I C +A + +M + G PNA T+ +
Sbjct: 411 LKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEI 470
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
R + ++ + L M+ G L F V Q + + A +L ++M+ KG
Sbjct: 471 IIRSLFEKDENDKAEKLLHEMIAKGLLVLD----FKVADVFVQNENDKAEKLLHEMIAKG 526
Query: 181 F 181
Sbjct: 527 L 527
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 99/226 (43%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G++ + V+ N LI+ +C Q+ ++ ++ K+ PD I+ +++ GL L G+
Sbjct: 36 MEVKGIRANFVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGE 95
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
K+ ++ G D +Y + C R A L+ + ++ PN YN
Sbjct: 96 VKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNT 155
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ +++LY M G P+ + L+ ++ A L ++M+ K
Sbjct: 156 IIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKN 215
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + ++L + LC G + EA+ M ++G KP V++ +
Sbjct: 216 INPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTL 261
Score = 44.3 bits (103), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 35/186 (18%), Positives = 83/186 (44%), Gaps = 2/186 (1%)
Query: 42 SPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASG 101
+P +I + I+G L + Q A + K+M+ G + N I +C ++ +
Sbjct: 7 TPPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFS 66
Query: 102 LMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGC-LPNTQSCMFLVKLC 160
++ ++++ G P+ T N + +++ S + + +++ G + + L LC
Sbjct: 67 VLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLC 126
Query: 161 KRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQ 220
K E A++L + ++ +++ + + D LC + EA + EM +G P
Sbjct: 127 KIGE-TRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDA 185
Query: 221 VSFRRI 226
+++ +
Sbjct: 186 ITYTTL 191
>gi|449442212|ref|XP_004138876.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g24830-like [Cucumis sativus]
gi|449499387|ref|XP_004160802.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g24830-like [Cucumis sativus]
Length = 633
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 107/226 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G PDI +YN LI +CK+ Q AY I + M +SPD I Y II L + G
Sbjct: 337 MLKRGFLPDIFTYNTLISAFCKEGQFGDAYYIHDVMSRMGVSPDQILYKMIIQALCMNGD 396
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA + L M E P+ +N I Y L +A D+M+ G+ PN TYN
Sbjct: 397 AIKADEFLHSMLEKSMVPEPHIWNLIIDCYGRYGYLSNAISKRDQMLVAGVQPNVFTYNA 456
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++ S+++L M+ G P+ + L+ + ++ ALQL+++M+ KG
Sbjct: 457 LIHAQVRGGNIFSAYSLKKEMLLLGLFPDVVTYNLLINGACKHGQLRFALQLYDEMLRKG 516
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + + L + C G++ EAE F E+ G V F+ I
Sbjct: 517 YEADKITYTELINGHCMCGEMKEAEDLFFELHRSGLPMDIVPFKVI 562
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 112/255 (43%), Gaps = 6/255 (2%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G D+V++N L++ C + +E A + +M + SP+ +Y II G L DKA
Sbjct: 164 GFAVDLVTHNYLLNGLCINCDMEMADSLFREMLEMGPSPNCATYNIIIKGFCLRMNMDKA 223
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGL--SPNATTYNLFF 122
D+ M G P YN + C L DA L++ ++ + + +A T +
Sbjct: 224 LDLFYTMVNSGIRPSRITYNILLHALCKRGILVDARKLLEVILGDDIKTTDDAITSTILM 283
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGF 181
+ S D + L+ +M+ + + L+ LC Q+K +IAL DM+++GF
Sbjct: 284 DSCFKSGDTIQAVALWDKMVEKKTEIDVVAYNVLIHGLCLNQDK-KIALGYVADMLKRGF 342
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQN 241
I + L C G+ +A M G P Q+ ++ I + L +A++
Sbjct: 343 LPDIFTYNTLISAFCKEGQFGDAYYIHDVMSRMGVSPDQILYKMI--IQALCMNGDAIKA 400
Query: 242 LSNKMALFGPSMIPK 256
++ SM+P+
Sbjct: 401 DEFLHSMLEKSMVPE 415
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 95/226 (42%), Gaps = 5/226 (2%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E +PD Y ++ C + A + K+ E + D++++ ++ GL + +
Sbjct: 130 EATQQPD---YTVMVRDLCLKGKFGAALLLRRKLIKEGFAVDLVTHNYLLNGLCINCDME 186
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
A + +EM E G P+ A YN I+ +C+ + A L MV G+ P+ TYN+
Sbjct: 187 MADSLFREMLEMGPSPNCATYNIIIKGFCLRMNMDKALDLFYTMVNSGIRPSRITYNILL 246
Query: 123 RVFYWSNDLRSSWNLYCRMMG--TGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
L + L ++G + + L+ C + A+ LW+ MVEK
Sbjct: 247 HALCKRGILVDARKLLEVILGDDIKTTDDAITSTILMDSCFKSGDTIQAVALWDKMVEKK 306
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ +VL LC A +M+++G P ++ +
Sbjct: 307 TEIDVVAYNVLIHGLCLNQDKKIALGYVADMLKRGFLPDIFTYNTL 352
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 101/253 (39%), Gaps = 35/253 (13%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
D ++ L+D K +A + +KM ++ DV++Y +I GL L A +
Sbjct: 275 DAITSTILMDSCFKSGDTIQAVALWDKMVEKKTEIDVVAYNVLIHGLCLNQDKKIALGYV 334
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
+M + G PD YN I +C + DA + D M G+SP+ Y + + +
Sbjct: 335 ADMLKRGFLPDIFTYNTLISAFCKEGQFGDAYYIHDVMSRMGVSPDQILYKMIIQALCMN 394
Query: 129 NDLRSS------------------WNL----YCR-------------MMGTGCLPNTQSC 153
D + WNL Y R M+ G PN +
Sbjct: 395 GDAIKADEFLHSMLEKSMVPEPHIWNLIIDCYGRYGYLSNAISKRDQMLVAGVQPNVFTY 454
Query: 154 MFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIE 213
L+ R + A L +M+ G ++ ++L + C G+L A + + EM+
Sbjct: 455 NALIHAQVRGGNIFSAYSLKKEMLLLGLFPDVVTYNLLINGACKHGQLRFALQLYDEMLR 514
Query: 214 KGHKPSQVSFRRI 226
KG++ ++++ +
Sbjct: 515 KGYEADKITYTEL 527
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 55/118 (46%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV+P++ +YN LI + + AY + ++M + PDV++Y +I G GQ A
Sbjct: 446 GVQPNVFTYNALIHAQVRGGNIFSAYSLKKEMLLLGLFPDVVTYNLLINGACKHGQLRFA 505
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
+ EM G D Y I +C+ +++A L E+ GL + + + F
Sbjct: 506 LQLYDEMLRKGYEADKITYTELINGHCMCGEMKEAEDLFFELHRSGLPMDIVPFKVIF 563
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 93/220 (42%), Gaps = 2/220 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M EMG P+ +YN +I +C ++KA + M + I P I+Y ++ L G
Sbjct: 195 MLEMGPSPNCATYNIIIKGFCLRMNMDKALDLFYTMVNSGIRPSRITYNILLHALCKRGI 254
Query: 61 PDKARDVLKE-MKEYGCYPDAAAYNAAIRNYCI-AKRLRDASGLMDEMVEKGLSPNATTY 118
AR +L+ + + D A + + + C + A L D+MVEK + Y
Sbjct: 255 LVDARKLLEVILGDDIKTTDDAITSTILMDSCFKSGDTIQAVALWDKMVEKKTEIDVVAY 314
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
N+ + D + + M+ G LP+ + L+ ++ + A + + M
Sbjct: 315 NVLIHGLCLNQDKKIALGYVADMLKRGFLPDIFTYNTLISAFCKEGQFGDAYYIHDVMSR 374
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
G ++ ++ LC G ++A++ M+EK P
Sbjct: 375 MGVSPDQILYKMIIQALCMNGDAIKADEFLHSMLEKSMVP 414
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 46/90 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G+ PD+V+YN LI+ CK Q+ A ++ ++M + D I+YT +I G + G+
Sbjct: 477 MLLLGLFPDVVTYNLLINGACKHGQLRFALQLYDEMLRKGYEADKITYTELINGHCMCGE 536
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNY 90
+A D+ E+ G D + Y
Sbjct: 537 MKEAEDLFFELHRSGLPMDIVPFKVIFEKY 566
>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
Length = 841
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 112/237 (47%), Gaps = 2/237 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + +KPD+V+Y+ L+D YC +V KA I M ++ +V SY +I G +
Sbjct: 429 MMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKM 488
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + KEM +PD Y++ I C + R+ A L+DEM +G P+ TYN
Sbjct: 489 VDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNS 548
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + L ++ G G P+ + LVK + K+E A +++ D++ KG
Sbjct: 549 ILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKG 608
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQE 237
+ + V+ CD G EA +M E G P ++ I ++ L K E
Sbjct: 609 YNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEII--ILSLFEKDE 663
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 122/255 (47%), Gaps = 2/255 (0%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
V+PD+V YN +ID CKD+ V A+ + + + I PDV +Y ++I G +VG+ A
Sbjct: 329 VQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAI 388
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
D+ +M PD ++ + +C +++A ++ M+++ + P+ TY+ +
Sbjct: 389 DLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGY 448
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
N++ + +++ M G N QS ++ + + V+ A++L+ +M K +
Sbjct: 449 CLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDV 508
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNK 245
+ L D LC G++ A + EM +G +P +++ I L L K + ++
Sbjct: 509 ITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSI--LDALCKKHHVDKAITLL 566
Query: 246 MALFGPSMIPKREEY 260
L G + P Y
Sbjct: 567 TKLKGQGIRPDMNTY 581
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 106/223 (47%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
MG D VSY LI+ CK + + A +++ + + + PDV+ Y +II G+ +
Sbjct: 292 MGFHLDQVSYGTLINGLCKVGETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVND 351
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
A D+ E +PD YNA I +CI +L+DA L ++M K + P+ T+++
Sbjct: 352 AFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVD 411
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
F +++ + N+ MM P+ + L+ +V A ++N M +G +
Sbjct: 412 GFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTA 471
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ +++ + C + + EA K F EM K P +++ +
Sbjct: 472 NVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSL 514
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 92/211 (43%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G +PD ++ I +C Q+ +A +K+ D +SY ++I GL VG+ A
Sbjct: 258 GYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAA 317
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++L+ PD YN I C K + DA L E V K + P+ TYN
Sbjct: 318 LELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISG 377
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
F L+ + +L+ +M +P+ + LV + ++ A + M+++
Sbjct: 378 FCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPD 437
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
++ L D C + ++ +AE F M +G
Sbjct: 438 VVTYSSLMDGYCLVNEVNKAESIFNTMSHRG 468
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 85/210 (40%)
Query: 43 PDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGL 102
PD I+ T+ I G L GQ +A ++ G + D +Y I C + A L
Sbjct: 261 PDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALEL 320
Query: 103 MDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKR 162
+ K + P+ YN + +++LY + P+ + L+
Sbjct: 321 LRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCI 380
Query: 163 QEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
K++ A+ L+N M K + +L D C G + EA+ M+++ KP V+
Sbjct: 381 VGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVT 440
Query: 223 FRRIKALMELANKQEALQNLSNKMALFGPS 252
+ + L N+ +++ N M+ G +
Sbjct: 441 YSSLMDGYCLVNEVNKAESIFNTMSHRGVT 470
Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 29/149 (19%), Positives = 57/149 (38%)
Query: 75 GCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSS 134
G PD I+ +C+ ++ A D+++ G + +Y + +++
Sbjct: 258 GYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAA 317
Query: 135 WNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDL 194
L R G P+ ++ + + V A L+++ V K + + L
Sbjct: 318 LELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISG 377
Query: 195 LCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
C +GKL +A F +M K P +F
Sbjct: 378 FCIVGKLKDAIDLFNKMTSKNIIPDVYTF 406
>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
Length = 798
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 118/242 (48%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PD+VSY +I+ ++ Q++KAY + ++M D+ +SP+ I+Y ++ G G+P +A
Sbjct: 201 GCPPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEA 260
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ ++M G PD YN + C R +A + D MV+KG P+++ Y
Sbjct: 261 IGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHG 320
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ L L M+ G P+ L+ + V+ A+ ++ M ++G
Sbjct: 321 YATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPN 380
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSN 244
I+ + D LC +GK+ +A F +I +G P+ V FR + + +K + + L+
Sbjct: 381 IVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAV 440
Query: 245 KM 246
+M
Sbjct: 441 EM 442
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 116/229 (50%), Gaps = 3/229 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ P+ + +N L++ CK+ V +A I + M D+ DVI+YT++I G L G+ D+A
Sbjct: 446 GICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEA 505
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+L+ M G P+ YN I YC R+ DA L +M KG++P Y+
Sbjct: 506 TKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHG 565
Query: 125 FYWSNDLRSSWNLYCRMMGTGC-LPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
+ + + ++ LY M+ G LP + L LC+ + AL++++++ F
Sbjct: 566 LFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQ-NNCTDDALRMFHNLCLIDFHL 624
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF-RRIKALME 231
+++ D L G+ EA+ F ++ +G P+ V++ +K+L+E
Sbjct: 625 QNRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIE 673
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 107/226 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ P+ ++YNCL+ YC + ++A I KM + + PDV++Y +++ L G+
Sbjct: 232 MLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGR 291
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR V M + G PD++ Y + Y L L+D MV G P+ +N+
Sbjct: 292 SMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNI 351
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + + +M G PN + ++ R KV+ A+ ++ ++ +G
Sbjct: 352 LIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEG 411
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+V L LC K +AE+ +EMI +G P+ + F +
Sbjct: 412 LTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTL 457
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 97/226 (42%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G KPD Y L+ Y + + + +++++ M PD + +IG G
Sbjct: 302 MVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGM 361
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A +M++ G +P+ Y + C ++ DA D ++ +GL+PN +
Sbjct: 362 VDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRT 421
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + L M+G G PNT L+ ++ V A +++ MV
Sbjct: 422 LIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVD 481
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ L D C GK+ EA K M+ G KP++V++ I
Sbjct: 482 VQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTI 527
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 100/217 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G+ P+IV+Y ++D C+ +V+ A +++ E ++P+ + + ++I GL +
Sbjct: 372 MRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDK 431
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA ++ EM G P+ +N + + C + A + D MV + + TY
Sbjct: 432 WDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTT 491
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + L M+ G PN + ++ + ++E A L+ M KG
Sbjct: 492 LIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKG 551
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHK 217
I++ + L ++ A++ +L MI+ G K
Sbjct: 552 VNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIK 588
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 100/219 (45%), Gaps = 9/219 (4%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
+ D+ +Y+ +I + ++ A+ + ++ + I+++ ++ GL + A D
Sbjct: 93 RADLCTYSIVIGCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMD 152
Query: 67 V-LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMV----EKGLSPNATTYNLF 121
+ L+ M GC P+A +YN ++ C R + A L+ M+ G P+ +Y
Sbjct: 153 IALRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTV 212
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPN--TQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
L ++ L+ M+ G PN T +C+ L C + E A+ ++ M
Sbjct: 213 INGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCL-LHGYCSSGKPKE-AIGIFRKMCRD 270
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
G ++ + L LC G+ +EA K F M++KGHKP
Sbjct: 271 GVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKP 309
>gi|356519757|ref|XP_003528536.1| PREDICTED: protein Rf1, mitochondrial-like [Glycine max]
Length = 871
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 127/242 (52%), Gaps = 3/242 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+++MG+ P+ YN L+D Y K R+V +A + E+MR +SPD +++ ++ G G+
Sbjct: 343 IQDMGIAPNAAIYNTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGR 402
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ + +LK++ G + D++ Y+ + + C A RL +A L+ E++EKGL+ + +N
Sbjct: 403 IEDSDRLLKDLIVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNS 462
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSC-MFLVKLCKRQEKVEIALQLWNDMVEK 179
+ + ++ Y M+ G P++ +C L+ LC++ E + L+ M+EK
Sbjct: 463 LIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYR-MLEK 521
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEA 238
GF + VL D M L A+ + EM E+G P V+F I L + N +EA
Sbjct: 522 GFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEA 581
Query: 239 LQ 240
+
Sbjct: 582 YE 583
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 106/224 (47%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G + V+Y L+D Y K +E A + ++M++ I PD +++T++I GL G
Sbjct: 518 MLEKGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGN 577
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A +V EM G P+ AYN+ IR C R+ +A L EM +KGL + T+N+
Sbjct: 578 VEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNI 637
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEK 179
F ++ + + M G LP+ + L+ CK + V A ++ N M
Sbjct: 638 IIDGFCRRGQMKFAIETFLDMQRIGLLPDIFTFNILIGGYCKAFDMVG-AGEIVNKMYSC 696
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G I + C M K+ +A ++I G P V++
Sbjct: 697 GLDPDITTYNTYMHGYCRMRKMNQAVIILDQLISAGIVPDTVTY 740
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 104/222 (46%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G +P +++N +I +C+ +V ++ M SPDV+++ +I + G+ A
Sbjct: 242 GPRPSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINACCIGGRTWVA 301
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
D L M G P A + + C + +A L D + + G++PNA YN
Sbjct: 302 IDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNTLMDG 361
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
++ + ++ + LY M TG P+ + LV + ++E + +L D++ G
Sbjct: 362 YFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLFLD 421
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ DV+ LC G+L EA K E++EKG S V+F +
Sbjct: 422 SSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSL 463
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 105/222 (47%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ D Y+ ++ C ++++A K+++++ ++ ++ V+++ S+IG G DKA
Sbjct: 417 GLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKA 476
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ + M G P ++ N+ + C L++A L+ M+EKG N Y +
Sbjct: 477 FEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDG 536
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
++ N+L + L+ M G P+ + L+ + VE A +++ +M GF
Sbjct: 537 YFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPN 596
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ L LCD G++ EA K EM +KG +F I
Sbjct: 597 NFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNII 638
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 100/221 (45%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E G+ +V++N LI Y + +KA++ M +P + S++ GL G
Sbjct: 450 EKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQ 509
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
+AR +L M E G + AY + Y L A L EM E+G+ P+A +
Sbjct: 510 EARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALI 569
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
+ ++ ++ ++ M G +PN + L++ +V AL+L +M +KG
Sbjct: 570 DGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLL 629
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
S +++ D C G++ A ++FL+M G P +F
Sbjct: 630 SDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLPDIFTF 670
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 63/125 (50%), Gaps = 1/125 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ +G+ PDI ++N LI YCK + A +IV KM + PD+ +Y + + G + +
Sbjct: 658 MQRIGLLPDIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRK 717
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A +L ++ G PD YN + C + L A L ++++ G PN T N+
Sbjct: 718 MNQAVIILDQLISAGIVPDTVTYNTMLSGIC-SDILDRAMILTAKLLKMGFIPNVITTNM 776
Query: 121 FFRVF 125
F
Sbjct: 777 LLSHF 781
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 97/223 (43%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P + N L+ C+ +++A ++ +M ++ + ++YT ++ G +
Sbjct: 483 MVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNN 542
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A+ + KEMKE G YPDA A+ A I A + +A + EM G PN YN
Sbjct: 543 LEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNS 602
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
R + + L M G L +T + ++ R+ +++ A++ + DM G
Sbjct: 603 LIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIG 662
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I ++L C +V A + +M G P ++
Sbjct: 663 LLPDIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTY 705
Score = 43.9 bits (102), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 81/197 (41%), Gaps = 2/197 (1%)
Query: 28 KAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAI 87
+A +++ MR + P + S T ++ L +G + K+M G P +NA I
Sbjct: 195 EALEVLRMMRGVGVRPGLSSITILLRLLLRIGDYGSVWKLFKDMIFKGPRPSNLTFNAMI 254
Query: 88 RNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCL 147
+C R+ L+ M + SP+ T+N+ + + M+ +G
Sbjct: 255 CGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINACCIGGRTWVAIDWLHLMVRSGVE 314
Query: 148 PNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEK 206
P+ + L LC+ VE A +L++ + + G + + L D ++ +A
Sbjct: 315 PSVATFTTILHALCREGNVVE-ARKLFDGIQDMGIAPNAAIYNTLMDGYFKAREVAQASL 373
Query: 207 SFLEMIEKGHKPSQVSF 223
+ EM G P V+F
Sbjct: 374 LYEEMRTTGVSPDCVTF 390
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 64/155 (41%), Gaps = 37/155 (23%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGL----- 55
M G+ PDI +YN + YC+ R++ +A I++++ I PD ++Y +++ G+
Sbjct: 693 MYSCGLDPDITTYNTYMHGYCRMRKMNQAVIILDQLISAGIVPDTVTYNTMLSGICSDIL 752
Query: 56 -------------GLV----------------GQPDKARDVLKEMKEYGCYPDAAAYNAA 86
G + G P+KA ++++E D +Y
Sbjct: 753 DRAMILTAKLLKMGFIPNVITTNMLLSHFCKQGMPEKALIWGQKLREISFGFDEISYRIL 812
Query: 87 IRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
+ YC+ ++D L+ EK L + Y F
Sbjct: 813 DQAYCL---MQDDVELVRGTYEKHLFMDFLMYITF 844
>gi|242070015|ref|XP_002450284.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
gi|241936127|gb|EES09272.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
Length = 727
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 108/223 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR MG+ PD+++YN +++ YCK +++A ++ +R ++P V++Y ++I G +G
Sbjct: 375 MRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGG 434
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++AR + +EM E GC+PD Y + + L A DEM+ KGL P+ YN
Sbjct: 435 LEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNT 494
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
D ++ L MM G P+T + ++ + ++ A L MV G
Sbjct: 495 RICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDG 554
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ L C+ G L EA K M+ G +PS V++
Sbjct: 555 LQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTY 597
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 113/225 (50%), Gaps = 4/225 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+R G+ P +++YN LID YC+ +E+A ++ E+M ++ PDV +YT ++ G V
Sbjct: 410 LRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRN 469
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
AR+ EM G PD AYN I I A L + M+ KG+ P+ TYN+
Sbjct: 470 LPMAREFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNV 529
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPN--TQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
+ +L+ + +L +M+ G P+ T +C+ C+R E A +L N MV
Sbjct: 530 IIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAH-CERGLLSE-ARKLLNGMVS 587
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G ++ +L C G L A F +M++ G +P+++++
Sbjct: 588 DGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITY 632
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 107/244 (43%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G++PD +YN I KA+++ E M + I PD ++Y II GL G
Sbjct: 480 MLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGN 539
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A+D+ +M G PD Y I +C L +A L++ MV GL P+ TY +
Sbjct: 540 LKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTI 599
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+L S++ + +M+ G PN + L+ R + +A +++M+E+G
Sbjct: 600 LIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLERG 659
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+L D C G +A + + EM + G P + + + + A++
Sbjct: 660 LAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALFKGFDKGHMYHAIE 719
Query: 241 NLSN 244
L N
Sbjct: 720 YLEN 723
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 105/228 (46%), Gaps = 10/228 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ P +V+YN +I K QVE A +MR + PD+I+Y S++ G G
Sbjct: 340 MENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGN 399
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A +L +++ G P YN I YC L +A L +EMVE+G P+ TY +
Sbjct: 400 LKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTI 459
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLP-----NTQSCMFLVKLCKRQEKVEIALQLWND 175
+ +L + + M+ G P NT+ C L+ A QL
Sbjct: 460 LMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELI-----LGDTHKAFQLREV 514
Query: 176 MVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
M+ KG + +V+ D LC G L +A+ ++M+ G +P +++
Sbjct: 515 MMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITY 562
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 101/255 (39%), Gaps = 36/255 (14%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV PD+ NC++ V + + + +M +I P +++Y +++ G+ D+A
Sbjct: 203 GVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDSFLKEGRKDEA 262
Query: 65 RDVLKEMKEY--GCYPDAAAYNAAIRNYCIAKRLRDASGLMD------------------ 104
+LKEM+ GC + YN I L +A+ L+D
Sbjct: 263 SMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSMRLSKKASSFTYNPLIT 322
Query: 105 ----------------EMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLP 148
EM +G+ P TYN S + ++ + M G LP
Sbjct: 323 ALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLP 382
Query: 149 NTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSF 208
+ + ++ + ++ AL L D+ G +L + L D C +G L EA +
Sbjct: 383 DLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLK 442
Query: 209 LEMIEKGHKPSQVSF 223
EM+E+G P ++
Sbjct: 443 EEMVEQGCFPDVCTY 457
Score = 40.0 bits (92), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 70/170 (41%), Gaps = 5/170 (2%)
Query: 74 YGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRS 133
+G PD N +R A R D + EM++ + P TYN F
Sbjct: 202 HGVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDSFLKEGRKDE 261
Query: 134 SWNLYCRM--MGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDM-VEKGFGSYILVSDV 190
+ L M G GCL N + ++ R+ +E A +L + M + K S+ +
Sbjct: 262 ASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSMRLSKKASSF--TYNP 319
Query: 191 LFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
L L + G + + E +EM +G P+ V++ I + + + EA Q
Sbjct: 320 LITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQ 369
>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Vitis vinifera]
Length = 718
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 110/223 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+KP IV+YN L+D YCK +V++ ++ +M+ +P+ ++Y +I GL G+
Sbjct: 225 MGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGE 284
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A+ ++ EM + G A YN I Y L +A L +EMV KG SP TYN
Sbjct: 285 FEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNS 344
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + + M+ LP+ S L+ R + A L++++
Sbjct: 345 FIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIY 404
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I+ + L D LC G+L A++ +EMI +G P V++
Sbjct: 405 LFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTY 447
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 115/237 (48%), Gaps = 3/237 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISY-TSIIGGLGLVGQPDK 63
G+ PDIV+Y L++ CK + A + ++M E + D +Y T I+G L L G +
Sbjct: 439 GIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKL-GDTSR 497
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
A + +EM G PD YN + C L +AS L+ +MV G+ P+ TY
Sbjct: 498 AFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIH 557
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
+ LR ++ M+ G P+ + L+ + ++E A +++M EKG
Sbjct: 558 AHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILP 617
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEAL 239
++ + L + LC + ++ +A F EM+EKG P++ S+ I + N QEAL
Sbjct: 618 NVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEAL 674
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 84/180 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD++ YN ++D CK +E+A ++++KM + + PD ++YTSII G+
Sbjct: 505 MLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGR 564
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
K R++ EM G P Y I + RL A EM EKG+ PN TYN
Sbjct: 565 LRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNS 624
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++N + M+ G PN S L+ + AL L+ M+++G
Sbjct: 625 LINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRG 684
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 116/256 (45%), Gaps = 2/256 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G P+ V+YN LI+ K + E+A ++ +M + +Y +I G G
Sbjct: 260 MQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGM 319
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + +EM G P A YN+ I C R+ DA + +M+ L P+ +YN
Sbjct: 320 LAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNT 379
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ +L ++ L+ + P + L+ RQ ++E+A QL +M+ +G
Sbjct: 380 LIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEG 439
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF-RRIKALMELANKQEAL 239
I+ +L + C MG L A++ F EM+ +G + ++ RI ++L + A
Sbjct: 440 IAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAF 499
Query: 240 QNLSNKMAL-FGPSMI 254
+A F P +I
Sbjct: 500 SLQEEMLAKGFPPDLI 515
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 94/213 (44%)
Query: 14 NCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKE 73
+ LI VY K VE+ + +KM +SPDV + I+ L KA +V + M E
Sbjct: 168 DLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGE 227
Query: 74 YGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRS 133
+G P YN + +YC +++ L+ EM +G +PN TYN+ +
Sbjct: 228 FGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQ 287
Query: 134 SWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFD 193
+ L M+ TG + + L+ + + AL L +MV KG + +
Sbjct: 288 AKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIY 347
Query: 194 LLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
LC +G++ +A + +M+ P VS+ +
Sbjct: 348 GLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTL 380
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 101/222 (45%), Gaps = 2/222 (0%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ PD+ + N ++ + + KA ++ M + I P +++Y +++ G+ +
Sbjct: 195 LSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGL 254
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
D+L EM+ GC P+ YN I A GL+ EM++ GL +A TYN +
Sbjct: 255 DLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGY 314
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSC-MFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ L + +L M+ G P + F+ LCK ++ A+Q +DM+
Sbjct: 315 FNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLG-RMSDAMQQLSDMLANNLLPD 373
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ + L C +G L++A F E+ P+ V++ +
Sbjct: 374 VVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTL 415
>gi|15221377|ref|NP_177613.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207514|sp|Q9SSF9.1|PP123_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g74750
gi|5882748|gb|AAD55301.1|AC008263_32 Contains 2 PF|01535 DUF domains [Arabidopsis thaliana]
gi|332197508|gb|AEE35629.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 855
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 104/219 (47%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
R+ G K D +Y ++ + +Q + K++++M + P+ ++Y +I G
Sbjct: 351 RQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYL 410
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
+A +V +M+E GC PD Y I + A L A + M E GLSP+ TY++
Sbjct: 411 KEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVI 470
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
+ L ++ L+C M+G GC PN + ++ L + E AL+L+ DM GF
Sbjct: 471 INCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGF 530
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQ 220
+ ++ ++L G L EAE F EM K P +
Sbjct: 531 QPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDE 569
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 97/219 (44%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E G +PD V+Y LID++ K ++ A + ++M++ +SPD +Y+ II LG G
Sbjct: 420 MQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGH 479
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A + EM GC P+ +N I + A+ A L +M G P+ TY++
Sbjct: 480 LPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSI 539
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
V L + ++ M +P+ LV L + V+ A Q + M++ G
Sbjct: 540 VMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAG 599
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
+ + L + ++ EA M+ G PS
Sbjct: 600 LRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPS 638
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 115/251 (45%), Gaps = 2/251 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G KP+ V+YN LI Y + +++A + +M++ PD ++Y ++I G D A
Sbjct: 389 GCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIA 448
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
D+ + M+E G PD Y+ I A L A L EMV +G +PN T+N+ +
Sbjct: 449 MDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIAL 508
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + ++ LY M G P+ + ++++ +E A ++ +M K +
Sbjct: 509 HAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPD 568
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSN 244
V +L DL G + +A + + M++ G +P+ + + + ++ NL
Sbjct: 569 EPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQ 628
Query: 245 KMALFG--PSM 253
M G PS+
Sbjct: 629 SMLALGLHPSL 639
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 90/208 (43%), Gaps = 16/208 (7%)
Query: 63 KARDVLKEMKEY--------------GCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVE 108
+A VLK+M Y G D Y + N AK+ + + L+DEMV
Sbjct: 328 QANQVLKQMDNYANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVR 387
Query: 109 KGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEI 168
G PN TYN + +N L+ + N++ +M GC P+ + L+ + + ++I
Sbjct: 388 DGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDI 447
Query: 169 ALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKA 228
A+ ++ M E G V+ + L G L A + F EM+ +G P+ V+F + A
Sbjct: 448 AMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIA 507
Query: 229 LMELANKQEALQNLSNKM--ALFGPSMI 254
L A E L M A F P +
Sbjct: 508 LHAKARNYETALKLYRDMQNAGFQPDKV 535
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 74/160 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P++V++N +I ++ K R E A K+ M++ PD ++Y+ ++ LG G
Sbjct: 490 MVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGF 549
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A V EM+ PD Y + + A + A M++ GL PN T N
Sbjct: 550 LEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNS 609
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLC 160
F + + ++NL M+ G P+ Q+ L+ C
Sbjct: 610 LLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLSCC 649
>gi|357117116|ref|XP_003560320.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Brachypodium distachyon]
Length = 598
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 100/215 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ GV PD+V +N L+ + + E A+++ +M D P+ +SYT+++ GLG G+
Sbjct: 217 MKAAGVAPDVVVFNTLLAGFVAADRFEDAFELAREMERRDCPPNAVSYTTLMQGLGSRGR 276
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+ V EM+ GC PD+ Y + +C A RL +D M L + Y
Sbjct: 277 VDEVMRVFVEMRRKGCAPDSVTYGTLVSAFCKAGRLSQGYEFLDAMSRDALRVDPGVYLG 336
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
FF L L RM C P+ +++L + + + A+ LWN+M G
Sbjct: 337 FFVAHEKKEQLEECLELMERMRECRCPPDLGIYNVVLRLSCKLGETKQAMALWNEMENSG 396
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
+ ++ + L G LV+A F +M+ +G
Sbjct: 397 LSPGVDTFAIMVNGLVGQGSLVDACSFFKDMVGRG 431
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 97/278 (34%), Gaps = 73/278 (26%)
Query: 1 MREMGVKPDIVSYNCLIDVYCK-----------------------------------DRQ 25
MR G PD V+Y L+ +CK Q
Sbjct: 287 MRRKGCAPDSVTYGTLVSAFCKAGRLSQGYEFLDAMSRDALRVDPGVYLGFFVAHEKKEQ 346
Query: 26 VEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNA 85
+E+ +++E+MR E C PD YN
Sbjct: 347 LEECLELMERMR-----------------------------------ECRCPPDLGIYNV 371
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
+R C + A L +EM GLSP T+ + L + + + M+G G
Sbjct: 372 VLRLSCKLGETKQAMALWNEMENSGLSPGVDTFAIMVNGLVGQGSLVDACSFFKDMVGRG 431
Query: 146 CLPNTQSCMF--LVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVE 203
Q + L+ R EK+E+A +W +V +G + + L + +
Sbjct: 432 LFVAPQYGVLKDLLNALVRDEKLELAKDVWGCIVSRGCELNVGAWTIWIHALYAKKHVKD 491
Query: 204 AEKSFLEMIEKGHKPSQVSFRRI-KALMELANKQEALQ 240
A L+M+E G P +F ++ K L +L N+Q A +
Sbjct: 492 ACSYCLDMLEAGLMPQPDTFAKLMKGLKKLYNRQIAAE 529
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 79/180 (43%), Gaps = 14/180 (7%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MRE PD+ YN ++ + CK + ++A + +M + +SP V ++ ++ GL G
Sbjct: 357 MRECRCPPDLGIYNVVLRLSCKLGETKQAMALWNEMENSGLSPGVDTFAIMVNGLVGQGS 416
Query: 61 PDKARDVLKEM--------KEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLS 112
A K+M +YG D NA +R+ ++L A + +V +G
Sbjct: 417 LVDACSFFKDMVGRGLFVAPQYGVLKD--LLNALVRD----EKLELAKDVWGCIVSRGCE 470
Query: 113 PNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQL 172
N + ++ Y ++ + + M+ G +P + L+K K+ +IA ++
Sbjct: 471 LNVGAWTIWIHALYAKKHVKDACSYCLDMLEAGLMPQPDTFAKLMKGLKKLYNRQIAAEI 530
>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 110/223 (49%), Gaps = 2/223 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV PD+VS++ L+ V+ ++R +++A M+ + PD + YT ++ G G
Sbjct: 97 MLRQGVVPDLVSFSSLMAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGN 156
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + EM E GC D AYN + C K L DA L DEMVE+G P+ T+
Sbjct: 157 MLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTT 216
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
++ + +L+ M P+ + L+ CK E +E A +LW+ M+ +
Sbjct: 217 LIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGE-MEKASELWDGMISR 275
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
+ +L + C +G + EA + + MIEKG KP+ V+
Sbjct: 276 KIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVT 318
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 122/242 (50%), Gaps = 8/242 (3%)
Query: 10 IVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLK 69
+V+YN LI YC++ +E+A++I+ M D+ + P + +Y +II GL G+ +A+ +L
Sbjct: 1 MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60
Query: 70 EMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSN 129
EM G PD YN + C +A + EM+ +G+ P+ +++ VF +
Sbjct: 61 EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNR 120
Query: 130 DLRSSWNLYCRMMGTGCLP-NTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVS 188
L + + M G +P N + + C+ +E AL++ ++M+E+G ++
Sbjct: 121 HLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLE-ALKIRDEMLEQGCVLDVIAY 179
Query: 189 DVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMAL 248
+ + + LC L +A+K F EM+E+G P +F L + N++ ++L
Sbjct: 180 NTILNGLCKEKMLTDADKLFDEMVERGALPDFYTF------TTLIHGHCQDGNMTKALSL 233
Query: 249 FG 250
FG
Sbjct: 234 FG 235
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G+ PD V Y L+ YC++ + +A KI ++M ++ DVI+Y +I+ GL
Sbjct: 132 MKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKM 191
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A + EM E G PD + I +C + A L M ++ + P+ YN
Sbjct: 192 LTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNT 251
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F ++ + L+ M+ PN + L+ V A +LW+ M+EKG
Sbjct: 252 LIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKG 311
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ + + C G +A++ MI KG P +S+ +
Sbjct: 312 IKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTL 357
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 112/241 (46%), Gaps = 1/241 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G+ PD +YN L+ C+ +A +I +M + + PD++S++S++
Sbjct: 62 MLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRH 121
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A ++MK++G PD Y + YC + +A + DEM+E+G + YN
Sbjct: 122 LDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNT 181
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
L + L+ M+ G LP+ + L+ + + AL L+ M ++
Sbjct: 182 ILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRN 241
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEAL 239
I+ + L D C +G++ +A + + MI + P+ +++ I A + + EA
Sbjct: 242 IKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAF 301
Query: 240 Q 240
+
Sbjct: 302 R 302
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 77/163 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G PD ++ LI +C+D + KA + M +I PD+++Y ++I G VG+
Sbjct: 202 MVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGE 261
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA ++ M +P+ Y I YC + +A L D M+EKG+ P T N
Sbjct: 262 MEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNT 321
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQ 163
+ + S D + RM+ G P+ S L+ KR+
Sbjct: 322 VIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINDGKRR 364
>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
Length = 667
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 119/244 (48%), Gaps = 2/244 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRD-EDISPDVISYTSIIGGLGLVG 59
M E G++P+ ++Y ++D CK A ++ KM + I P+V+ Y++II GL G
Sbjct: 203 MVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDG 262
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ A+++ EM+E G P+ YN I +C + R +A L+ EM E+ +SP+ T++
Sbjct: 263 RQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFS 322
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ + LY M+ G +PNT + ++ +Q +++ A +++ M K
Sbjct: 323 VLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATK 382
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEA 238
G ++ +L D C ++ + K EM +G + +++ I +L N A
Sbjct: 383 GCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAA 442
Query: 239 LQNL 242
L L
Sbjct: 443 LDLL 446
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 124/291 (42%), Gaps = 55/291 (18%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDV--------------- 45
M+E G+ P++ +YNC+I+ +C + +A +++ +M + +SPDV
Sbjct: 274 MQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGK 333
Query: 46 --------------------ISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNA 85
I+Y S+I G + D A + M GC PD ++
Sbjct: 334 FFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSI 393
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
I YC AKR+ D L+ EM +GL N TY F +L ++ +L M+ +G
Sbjct: 394 LIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSG 453
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDM---------------VEKGFGSYILVSDV 190
PN +C L+ K++ AL+++ M VE +Y ++
Sbjct: 454 VCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTY----NI 509
Query: 191 LFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQ 240
L L + GK EAE+ + EM +G P +++ I L + + EA Q
Sbjct: 510 LICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQ 560
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 117/251 (46%), Gaps = 12/251 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD+++++ LID YC ++V+ K++ +M + + I+YT++I G +G
Sbjct: 379 MATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGN 438
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGL--------- 111
+ A D+L+EM G P+ N + C +L+DA + M + +
Sbjct: 439 LNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFN 498
Query: 112 --SPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIA 169
P+ TYN+ + LY M G +P+T + ++ +Q +++ A
Sbjct: 499 DVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEA 558
Query: 170 LQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKA 228
Q+++ M KGF ++ L + C +G++ + + F EM +G + +++R I
Sbjct: 559 TQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHG 618
Query: 229 LMELANKQEAL 239
++ N AL
Sbjct: 619 FCQVGNINGAL 629
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 106/217 (48%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+KP++V Y+ +ID KD + A + +M+++ ISP++ +Y +I G G+ +A+
Sbjct: 244 IKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQ 303
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+L+EM E PD ++ I + +A L +EM+ +G+ PN TYN F
Sbjct: 304 RLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGF 363
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
N L ++ ++ M GC P+ + L+ ++V+ ++L ++M +G +
Sbjct: 364 SKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANT 423
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
+ L C +G L A EMI G P+ V+
Sbjct: 424 ITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVT 460
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 111/222 (50%), Gaps = 9/222 (4%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
KP+++++ L++ C++ +V +A ++++M ++ + P+ I+Y +I+ G+ +G A +
Sbjct: 174 KPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALN 233
Query: 67 VLKEMKEYG-CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+L++M+E P+ Y+A I R DA L EM EKG+SPN TYN F
Sbjct: 234 LLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGF 293
Query: 126 ----YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
WS R ++ R M P+ + L+ ++ K A +L+N+M+ +G
Sbjct: 294 CSSGRWSEAQRLLREMFERKMS----PDVVTFSVLINALVKEGKFFEAEELYNEMLPRGI 349
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + + D +L AE+ F M KG P ++F
Sbjct: 350 IPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITF 391
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 108/248 (43%), Gaps = 48/248 (19%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKA---YKIVEKMRDE--------DISPDVISYT 49
M GV P++V+ N L+D C + +++ A +K+++K + + D+ PDV +Y
Sbjct: 449 MISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYN 508
Query: 50 SIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEK 109
+I GL G+ +A ++ +EM G PD YN+ I C RL +A+ + D M K
Sbjct: 509 ILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSK 568
Query: 110 GLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIA 169
G SP+ T+ N YC++ +V
Sbjct: 569 GFSPDVVTFTTLI-------------NGYCKV----------------------GRVGDG 593
Query: 170 LQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKAL 229
L+++ +M +G + + L C +G + A F EMI G P ++ R + L
Sbjct: 594 LEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNM--L 651
Query: 230 MELANKQE 237
L +K+E
Sbjct: 652 TGLWSKEE 659
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 81/166 (48%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
V+PD+ +YN LI + + +A ++ E+M + PD I+Y S+I GL + D+A
Sbjct: 500 VEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEAT 559
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+ M G PD + I YC R+ D + EM +G+ NA TY F
Sbjct: 560 QMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGF 619
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQ 171
++ + +++ M+ +G P+T + ++ +E+++ A+Q
Sbjct: 620 CQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVQ 665
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 116/265 (43%), Gaps = 12/265 (4%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
+I S+ LI +C ++ A K+ P ++++++++ GL + + +A
Sbjct: 110 NIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFF 169
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
++ C P+ A+ + C R+ +A L+D MVE GL PN TY
Sbjct: 170 HQI----CKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 225
Query: 129 NDLRSSWNLYCRMMGTGCL-PNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
D S+ NL +M + PN ++ + + A L+++M EKG +
Sbjct: 226 GDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFT 285
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEALQNLSNKM 246
+ + + C G+ EA++ EM E+ P V+F I AL++ EA + L N+M
Sbjct: 286 YNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEA-EELYNEM 344
Query: 247 ALFGPSMIPKREEYLAEMSASDSFS 271
G +IP Y S D FS
Sbjct: 345 LPRG--IIPNTITY---NSMIDGFS 364
>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
Length = 716
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 114/224 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ PD+V+Y+ ++ CK R + KA + +M ++ + PD +Y ++I G GQ
Sbjct: 249 MVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQ 308
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A V KEM+ + PD N + + C ++++A + D M KG +P+ +Y +
Sbjct: 309 WKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKI 368
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L +L+ M+G G P+ + L+K ++ A+ ++N+M + G
Sbjct: 369 MLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHG 428
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
++ + LC +GK+ +A + F +MI++G P + ++
Sbjct: 429 VKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYH 472
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 110/222 (49%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ PDI +++ LI Y ++KA I +MRD + PDV++YT++I L +G+ D A
Sbjct: 393 GIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDA 452
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ +M + G PD AY+ I+ +C L A L+ E++ G+ + ++
Sbjct: 453 MEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINN 512
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + N++ + G P+ L+ K+E AL++++ MV G
Sbjct: 513 LCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPN 572
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++V L + C +G++ E F EM++KG KPS + + I
Sbjct: 573 VVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNII 614
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 107/215 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ GVKPD+V+Y +I C+ +++ A + +M D+ ++PD +Y +I G G
Sbjct: 424 MRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGS 483
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA++++ E+ G D +++ I N C R+ DA + D V G P+A Y++
Sbjct: 484 LLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSM 543
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + ++ M+ G PN LV + +++ L L+ +M++KG
Sbjct: 544 LMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKG 603
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
++ +++ D L G+ V A+ F EM E G
Sbjct: 604 IKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESG 638
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 110/229 (48%), Gaps = 3/229 (1%)
Query: 1 MREM---GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGL 57
+R+M GV PD +YN LI Y Q ++A ++ ++MR I PDV++ ++G L
Sbjct: 281 LRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCK 340
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
G+ +ARDV M G PD +Y + Y L D + L D M+ G++P+ T
Sbjct: 341 YGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYT 400
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
+++ + + L + ++ M G P+ + ++ R K++ A++ +N M+
Sbjct: 401 FSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMI 460
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++G L C G L++A++ LE++ G + V F I
Sbjct: 461 DQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSI 509
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 105/224 (46%), Gaps = 4/224 (1%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDI--SPDVISYTSIIGGLGLVGQ 60
E+G PD+ SY+ L+ C + +A ++ M + SPDV++YT++I G
Sbjct: 179 ELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGD 238
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA D+ KEM + G PD Y++ + C A+ + A + +MV KG+ P+ TYN
Sbjct: 239 VNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNN 298
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSC-MFLVKLCKRQEKVEIALQLWNDMVEK 179
+ + + + ++ M LP+ + M + LCK K++ A +++ M K
Sbjct: 299 LIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCK-YGKIKEARDVFDTMAMK 357
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G + ++ + G LV+ F M+ G P +F
Sbjct: 358 GQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTF 401
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 105/223 (47%), Gaps = 3/223 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKI-VEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
G++ DI+ N L+ +C+ ++ ++A I + + + PDV SY+ ++ L G+ +
Sbjct: 145 GLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQ 204
Query: 64 ARDVLKEMKEYG--CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
A D+L+ M E G C PD AY I + + A L EMV++G+ P+ TY+
Sbjct: 205 ADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSV 264
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
+ + + +M+ G LP+ + L+ + + A++++ +M
Sbjct: 265 VHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSI 324
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
++ ++L LC GK+ EA F M KG P S++
Sbjct: 325 LPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYK 367
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 64/124 (51%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
+G PD V Y+ L+D YC ++EKA ++ + M I P+V+ Y +++ G +G+ D
Sbjct: 531 NVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRID 590
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
+ + +EM + G P YN I +A R A EM E G++ N TYN+
Sbjct: 591 EGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVL 650
Query: 123 RVFY 126
R F+
Sbjct: 651 RGFF 654
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 68/148 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G++P++V Y L++ YCK ++++ + +M + I P I Y II GL + G+
Sbjct: 564 MVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGR 623
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A+ EM E G + YN +R + + +A L E+ + + T N
Sbjct: 624 TVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNT 683
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLP 148
+ + + + +L+ + +G +P
Sbjct: 684 MIAGMFQTRRVEEAKDLFASISRSGLVP 711
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/224 (19%), Positives = 81/224 (36%), Gaps = 38/224 (16%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ P +Y L+D + + E A ++ + D+I ++ G + D+A
Sbjct: 111 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEAL 170
Query: 66 DVL-KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGL--SPNATTYNLFF 122
D+L E GC PD +Y+ +++ C + A L+ M E G SP+ Y
Sbjct: 171 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVI 230
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
F+ D V A L+ +MV++G
Sbjct: 231 DCFFKEGD-----------------------------------VNKACDLFKEMVQRGIP 255
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ + LC + +AE +M+ KG P ++ +
Sbjct: 256 PDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNL 299
>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
Length = 524
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 109/223 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G PD+ +YN LI+ YCK+ +KA ++ E+M + + ++YTS+I GQ
Sbjct: 280 MQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQ 339
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ + + G PD YNA I ++C + A +M EM +K + P+ TYN
Sbjct: 340 VQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNT 399
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
R F L + L M G P+ S L+ + ++ AL++ ++M++KG
Sbjct: 400 LMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKG 459
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
F ++ + L LC + + +AE EM+ KG P ++
Sbjct: 460 FNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITPDDSTY 502
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 112/225 (49%), Gaps = 3/225 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDE-DISPDVISYTSIIGGLGLVG 59
+R+M +P+ V+YN +I +C +V+ A +++ +MR+ I+PD +Y ++I G +G
Sbjct: 139 LRQMP-RPNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIG 197
Query: 60 QPDKARDVLKEMKEYG-CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
+ + A V EM G P A YNA I YC +L A ++MV++G++ TY
Sbjct: 198 RMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATY 257
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
NL + ++ + M G P+ + L+ ++ + AL+++ +M +
Sbjct: 258 NLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQ 317
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
KG + + L + G++ E ++ F ++KG +P V +
Sbjct: 318 KGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMY 362
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 113/231 (48%), Gaps = 5/231 (2%)
Query: 1 MREM----GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDE-DISPDVISYTSIIGGL 55
MREM G+ PD +Y LI +CK ++E A K+ ++M + +++P + Y ++IGG
Sbjct: 170 MREMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGY 229
Query: 56 GLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNA 115
VG+ D A ++M + G A YN + + R DA +++EM + G SP+
Sbjct: 230 CDVGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDV 289
Query: 116 TTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWND 175
TYN+ + + + + ++ M G + L+ + R+ +V+ +L+N
Sbjct: 290 FTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNV 349
Query: 176 MVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
V+KG +++ + L + C G + A + EM +K P +++ +
Sbjct: 350 AVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTL 400
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 120/263 (45%), Gaps = 4/263 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ + +YN L+ D + AY ++E+M+ SPDV +Y +I G G
Sbjct: 245 MVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGN 304
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA +V +EM + G A Y + I + ++++ L + V+KG+ P+ YN
Sbjct: 305 EKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNA 364
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
D+ ++ + M P+ + L++ +++ A L ++M ++G
Sbjct: 365 LINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRG 424
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
++ + L G + +A + EM++KG P+ +++ I+ L ++ +A
Sbjct: 425 IQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDA- 483
Query: 240 QNLSNKMALFGPSMIPKREEYLA 262
+NL +M G + P Y++
Sbjct: 484 ENLMKEMVAKG--ITPDDSTYIS 504
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 97/215 (45%), Gaps = 6/215 (2%)
Query: 11 VSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKE 70
++N ++ C + +A +++ +M P+ ++Y ++I G G+ A +V++E
Sbjct: 117 TTFNIMLRHLCATGKPVRALELLRQMP----RPNAVTYNTVIAGFCARGRVQAALEVMRE 172
Query: 71 MKEY-GCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKG-LSPNATTYNLFFRVFYWS 128
M+E G PD Y I +C R+ DA + DEM+ KG ++P+A YN +
Sbjct: 173 MRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDV 232
Query: 129 NDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVS 188
L + M+ G + L+ + A + +M + GF +
Sbjct: 233 GKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTY 292
Query: 189 DVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++L + C G +A + F EM +KG + + V++
Sbjct: 293 NILINGYCKEGNEKKALEVFEEMSQKGVRATAVTY 327
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 53/87 (60%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G++PD+VSYN LI Y ++ A ++ ++M D+ +P +++Y ++I GL + Q
Sbjct: 420 MTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQ 479
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAI 87
D A +++KEM G PD + Y + I
Sbjct: 480 GDDAENLMKEMVAKGITPDDSTYISLI 506
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 85/186 (45%), Gaps = 7/186 (3%)
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEK-GLSPNAT 116
G+P +A ++L++M P+A YN I +C R++ A +M EM E+ G++P+
Sbjct: 129 TGKPVRALELLRQMPR----PNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKY 184
Query: 117 TYNLFFRVFYWSNDLRSSWNLYCRMMGTG-CLPNTQSCMFLVKLCKRQEKVEIALQLWND 175
TY + + + ++ M+ G P+ L+ K+++ALQ D
Sbjct: 185 TYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYRED 244
Query: 176 MVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELAN 234
MV++G + ++L L + +A EM + G P ++ I + N
Sbjct: 245 MVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGN 304
Query: 235 KQEALQ 240
+++AL+
Sbjct: 305 EKKALE 310
Score = 43.9 bits (102), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 34/55 (61%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGL 55
M + G P +++YN LI CK RQ + A ++++M + I+PD +Y S+I GL
Sbjct: 455 MMDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITPDDSTYISLIEGL 509
>gi|147819071|emb|CAN69810.1| hypothetical protein VITISV_043106 [Vitis vinifera]
Length = 847
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 110/223 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+KP IV+YN L+D YCK +V++ ++ +M+ +P+ ++Y +I GL G+
Sbjct: 531 MGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGE 590
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A+ ++ EM + G A YN I Y L +A L +EMV KG SP TYN
Sbjct: 591 FEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGLLAEALSLQEEMVLKGASPTVATYNS 650
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + + M+ LP+ S L+ R + A L++++
Sbjct: 651 FIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIY 710
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I+ + L D LC G+L A++ +EMI +G P V++
Sbjct: 711 LFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTY 753
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 116/256 (45%), Gaps = 2/256 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G P+ V+YN LI+ K + E+A ++ +M + +Y +I G G
Sbjct: 566 MQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGL 625
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + +EM G P A YN+ I C R+ DA + +M+ L P+ +YN
Sbjct: 626 LAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNT 685
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ +L ++ L+ + P + L+ RQ ++E+A QL +M+ +G
Sbjct: 686 LIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEG 745
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF-RRIKALMELANKQEAL 239
I+ +L + C MG L A++ F EM+ +G + ++ RI ++L + A
Sbjct: 746 IAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAF 805
Query: 240 QNLSNKMAL-FGPSMI 254
+A F P +I
Sbjct: 806 SLQEEMLAKGFPPDLI 821
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 93/211 (44%)
Query: 16 LIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYG 75
LI VY K VE+ + +KM +SPDV + I+ L KA +V + M E+G
Sbjct: 476 LIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFG 535
Query: 76 CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSW 135
P YN + +YC +++ L+ EM +G +PN TYN+ + +
Sbjct: 536 IKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAK 595
Query: 136 NLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLL 195
L M+ TG + + L+ + + AL L +MV KG + + L
Sbjct: 596 GLIGEMLKTGLKVSAYTYNPLIYGYFNKGLLAEALSLQEEMVLKGASPTVATYNSFIYGL 655
Query: 196 CDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
C +G++ +A + +M+ P VS+ +
Sbjct: 656 CKLGRMSDAMQQLSDMLANNLLPDVVSYNTL 686
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 90/202 (44%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G P + +YN I CK ++ A + + M ++ PDV+SY ++I G +G KA
Sbjct: 640 GASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKA 699
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ E++ +P YN + C L A L EM+ +G++P+ TY +
Sbjct: 700 FLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNG 759
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
L + + M+ G ++ + + + A L +M+ KGF
Sbjct: 760 SCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPD 819
Query: 185 ILVSDVLFDLLCDMGKLVEAEK 206
+++ +V+ D LC +G L EA +
Sbjct: 820 LIIYNVVVDGLCKLGNLEEASE 841
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 101/222 (45%), Gaps = 2/222 (0%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ PD+ + N ++ + + KA ++ M + I P +++Y +++ G+ +
Sbjct: 501 LSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGL 560
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
D+L EM+ GC P+ YN I A GL+ EM++ GL +A TYN +
Sbjct: 561 DLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGY 620
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSC-MFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ L + +L M+ G P + F+ LCK ++ A+Q +DM+
Sbjct: 621 FNKGLLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLG-RMSDAMQQLSDMLANNLLPD 679
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ + L C +G L++A F E+ P+ V++ +
Sbjct: 680 VVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTL 721
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 2/102 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISY-TSIIGGLGLVGQPDK 63
G+ PDIV+Y L++ CK + A + ++M E + D +Y T I+G L L G +
Sbjct: 745 GIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKL-GDTSR 803
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDE 105
A + +EM G PD YN + C L +AS L+ +
Sbjct: 804 AFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQK 845
>gi|224129154|ref|XP_002320514.1| predicted protein [Populus trichocarpa]
gi|222861287|gb|EEE98829.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 103/200 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G++P++V++N LI +CK+ ++ +A + +M+ +++P+ ++Y ++I G G VG
Sbjct: 260 MGKNGLEPNVVTFNSLIHGFCKEGKLHEANRFFSEMKVMNVTPNTVTYNTLINGYGQVGN 319
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A V +EM G D YNA I C + + A+ L+ E+ ++ L PNA+TY+
Sbjct: 320 SNMAGKVYEEMMRNGVKADILTYNALILGLCKEGKTKKAAFLVKELDKENLVPNASTYSA 379
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ LY M+ +GC PN Q+ L + E E A + DM +
Sbjct: 380 LISGQCARKNSDRAFQLYKSMVRSGCHPNEQTFKMLTSAFVKNEDFEGAFNVLMDMFARS 439
Query: 181 FGSYILVSDVLFDLLCDMGK 200
S ++D LC GK
Sbjct: 440 MASDSNTLLEIYDGLCQCGK 459
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 92/204 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G P + S N + +V+ A +MR ISP+ ++ ++ L G+
Sbjct: 155 MKDYGFLPTVESCNAYLSSLLDFHRVDIALTFYREMRRCRISPNSYTFNLVLSALCKSGK 214
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA +VL+EM+ G P+ +YN I +C L A+ L + M + GL PN T+N
Sbjct: 215 LEKAVEVLREMESVGITPNVVSYNTLIAGHCNKGLLSIATKLKNLMGKNGLEPNVVTFNS 274
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F L + + M PNT + L+ + +A +++ +M+ G
Sbjct: 275 LIHGFCKEGKLHEANRFFSEMKVMNVTPNTVTYNTLINGYGQVGNSNMAGKVYEEMMRNG 334
Query: 181 FGSYILVSDVLFDLLCDMGKLVEA 204
+ IL + L LC GK +A
Sbjct: 335 VKADILTYNALILGLCKEGKTKKA 358
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 78/187 (41%), Gaps = 2/187 (1%)
Query: 40 DISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDA 99
D SP V + S+ + + A DV MK+YG P + NA + + R+ A
Sbjct: 126 DSSPRV--FDSLFKTYAHMNKFRNATDVFSRMKDYGFLPTVESCNAYLSSLLDFHRVDIA 183
Query: 100 SGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKL 159
EM +SPN+ T+NL S L + + M G PN S L+
Sbjct: 184 LTFYREMRRCRISPNSYTFNLVLSALCKSGKLEKAVEVLREMESVGITPNVVSYNTLIAG 243
Query: 160 CKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
+ + IA +L N M + G ++ + L C GKL EA + F EM P+
Sbjct: 244 HCNKGLLSIATKLKNLMGKNGLEPNVVTFNSLIHGFCKEGKLHEANRFFSEMKVMNVTPN 303
Query: 220 QVSFRRI 226
V++ +
Sbjct: 304 TVTYNTL 310
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 62/137 (45%), Gaps = 9/137 (6%)
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
++ F+ + N R++ +++ RM G LP +SC + +V+IAL + +M
Sbjct: 132 FDSLFKTYAHMNKFRNATDVFSRMKDYGFLPTVESCNAYLSSLLDFHRVDIALTFYREMR 191
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI------KALME 231
+++ LC GKL +A + EM G P+ VS+ + K L+
Sbjct: 192 RCRISPNSYTFNLVLSALCKSGKLEKAVEVLREMESVGITPNVVSYNTLIAGHCNKGLLS 251
Query: 232 LANKQEALQNLSNKMAL 248
+A K L+NL K L
Sbjct: 252 IATK---LKNLMGKNGL 265
>gi|255572834|ref|XP_002527349.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533268|gb|EEF35021.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 443
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 104/217 (47%), Gaps = 2/217 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PDI+ LI +CK + KA +I+E + D PDVI+Y +I G+ G+ A +
Sbjct: 117 PDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPDVITYNVLISGMCSTGRWMDAEKL 176
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L +M GC P +N I C L A ++++M + G +PN+ +YN F
Sbjct: 177 LADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCK 236
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+ + +M GC P+ + L LCK KV+ A++L N + KG ++
Sbjct: 237 EKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCK-DGKVDAAVELLNQLSSKGCSPVLI 295
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + D L +GK +A K EM KG KP +++
Sbjct: 296 TYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITY 332
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 108/226 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+ + G PD+++YN LI C + A K++ M SP V+++ +I L G
Sbjct: 145 IEDSGAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGL 204
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A DVL++M ++GC P++ +YN + +C K++ A + +M +G P+ TYN
Sbjct: 205 LGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNT 264
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ L ++ GC P + ++ + K + A +L ++M KG
Sbjct: 265 LLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKG 324
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
I+ L L GK+ EA K F ++ G KP+ +++ I
Sbjct: 325 LKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAI 370
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 116/251 (46%), Gaps = 2/251 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P +V++N LI+ C+ + +A ++EKM +P+ +SY ++ G +
Sbjct: 180 MVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKK 239
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A + L +M GCYPD YN + C ++ A L++++ KG SP TYN
Sbjct: 240 MERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNT 299
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L M G P+ + LV R+ KV+ A++ ++D+ G
Sbjct: 300 VIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLG 359
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEAL 239
+ + + LC K A M+++G KP++ S+ I+ L +EAL
Sbjct: 360 VKPNAITYNAIMLGLCKARKTDRAIDFLAYMVQRGCKPTEASYTILIEGLAYEGLAKEAL 419
Query: 240 QNLSNKMALFG 250
+ L N++ L G
Sbjct: 420 E-LLNELCLRG 429
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 112/235 (47%), Gaps = 2/235 (0%)
Query: 22 KDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAA 81
++ ++E+ ++ +E M PD+I TS+I G +G+ KA +++ +++ G PD
Sbjct: 96 RNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPDVI 155
Query: 82 AYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRM 141
YN I C R DA L+ +MV +G SP+ T+N+ L + ++ +M
Sbjct: 156 TYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKM 215
Query: 142 MGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKL 201
GC PN+ S L+ +++K+E A++ M +G I+ + L LC GK+
Sbjct: 216 PKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKV 275
Query: 202 VEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFG--PSMI 254
A + ++ KG P +++ + + K + L ++M G P +I
Sbjct: 276 DAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDII 330
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 65/124 (52%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G+KPDI++Y+ L+ ++ +V++A K + + P+ I+Y +I+ GL +
Sbjct: 320 MRAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARK 379
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A D L M + GC P A+Y I ++A L++E+ +G+ ++ +
Sbjct: 380 TDRAIDFLAYMVQRGCKPTEASYTILIEGLAYEGLAKEALELLNELCLRGVVKKSSAEKV 439
Query: 121 FFRV 124
R+
Sbjct: 440 AVRM 443
>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
Length = 754
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 113/226 (50%), Gaps = 3/226 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G +PD +YN LID C ++++A ++++M + VI+Y ++I G +
Sbjct: 426 MRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANK 485
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++ EM+ +G ++ YN I C ++R+ DAS LMD+M+ +G P+ TYN
Sbjct: 486 IREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNS 545
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
F D++ + ++ M GC P+ + L+ LCK +VE+A +L + K
Sbjct: 546 LLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCK-AGRVEVASKLLRSIQMK 604
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGH-KPSQVSFR 224
G + + L K EA F EM+E+ P VS+R
Sbjct: 605 GIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAAPDAVSYR 650
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 116/246 (47%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PD ++N L++ CK V+ A +I++ M E PDV +Y S+I GL +G+ +A
Sbjct: 290 GFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEA 349
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ L +M C P+ YN I C ++ +A+ L + KG+ P+ T+N +
Sbjct: 350 VEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQG 409
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + R + L+ M GC P+ + L+ + K++ AL + M G
Sbjct: 410 LCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARS 469
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSN 244
++ + L D C K+ EAE+ F EM G + V++ + + + + E L +
Sbjct: 470 VITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMD 529
Query: 245 KMALFG 250
+M + G
Sbjct: 530 QMIMEG 535
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 119/250 (47%), Gaps = 2/250 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P+ V+YN LI CK+ QVE+A ++ + + I PDV ++ S+I GL L A ++
Sbjct: 363 PNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMEL 422
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
+EM+ GC PD YN I + C +L +A ++ +M G + + TYN F
Sbjct: 423 FEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCK 482
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+N +R + ++ M G N+ + L+ LCK + +VE A QL + M+ +G
Sbjct: 483 ANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSR-RVEDASQLMDQMIMEGQKPDKF 541
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKM 246
+ L C G + +A M G +P V++ + + + A + E L +
Sbjct: 542 TYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSI 601
Query: 247 ALFGPSMIPK 256
+ G ++ P
Sbjct: 602 QMKGIALTPH 611
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 113/226 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G PD+ +YN +I CK +V++A + +++M D SP+ ++Y ++I L Q
Sbjct: 321 MLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQ 380
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A ++ + + G PD +N+ I+ C+ + R A L +EM KG P+ TYN+
Sbjct: 381 VEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNM 440
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
L + N+ +M +GC + + L+ + K+ A +++++M G
Sbjct: 441 LIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHG 500
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + L D LC ++ +A + +MI +G KP + ++ +
Sbjct: 501 VSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSL 546
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 119/254 (46%), Gaps = 3/254 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDED-ISPDVISYTSIIGGLGLVG 59
M E G VS N ++ +CK+ +VE A +++M ++D PD ++ +++ GL G
Sbjct: 250 MVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAG 309
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
A +++ M + G PD YN+ I C +++A +D+M+ + SPN TYN
Sbjct: 310 HVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYN 369
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVE 178
N + + L + G LP+ + L++ LC + +A++L+ +M
Sbjct: 370 TLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNH-RVAMELFEEMRS 428
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEA 238
KG ++L D LC GKL EA +M G S +++ + ANK
Sbjct: 429 KGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIRE 488
Query: 239 LQNLSNKMALFGPS 252
+ + ++M + G S
Sbjct: 489 AEEIFDEMEVHGVS 502
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 119/283 (42%), Gaps = 38/283 (13%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+KPD+ ++N LI C+ Q+ A ++E M + PD ++T+I+ G G D A
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGA 243
Query: 65 RDVLKEMKEYGC------------------------------------YPDAAAYNAAIR 88
+ ++M E+GC +PD +N +
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN 303
Query: 89 NYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLP 148
C A ++ A +MD M+++G P+ TYN +++ + +M+ C P
Sbjct: 304 GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSP 363
Query: 149 NTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSF 208
NT + L+ ++ +VE A +L + KG + + L LC A + F
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELF 423
Query: 209 LEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLSNKMALFG 250
EM KG +P + ++ I +L EAL N+ +M L G
Sbjct: 424 EEMRSKGCEPDEFTYNMLIDSLCSKGKLDEAL-NMLKQMELSG 465
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 93/220 (42%), Gaps = 15/220 (6%)
Query: 40 DISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDA 99
+ SP+ Y I+ LG G D R +L++MK GC + + I +Y + +
Sbjct: 78 NFSPEPALYEEILLRLGRSGSFDDMRKILEDMKNSGCEMGTSPFLILIESYAQFELQDEI 137
Query: 100 SGLMDEMVEK-GLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK 158
G++ M++ GL P+ YN + N+L+ + +M G P+ + L+K
Sbjct: 138 LGVVHWMIDDFGLKPDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIK 197
Query: 159 LCKRQEKVEIALQLWNDMVEKGFGSYILVSD-----VLFDLLCDMGKLVEAEKSFLEMIE 213
R ++ A+ + DM SY LV D + + G L A + +M+E
Sbjct: 198 ALCRAHQLRPAILMLEDM-----PSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVE 252
Query: 214 KGHKPSQVSFRRI-KALMELANKQEAL---QNLSNKMALF 249
G S VS I + ++AL Q +SN+ F
Sbjct: 253 FGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFF 292
>gi|218191848|gb|EEC74275.1| hypothetical protein OsI_09511 [Oryza sativa Indica Group]
Length = 933
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 130/266 (48%), Gaps = 4/266 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR MG+KPD +YN +I +C+ + KA K++ +M+ I P++I+Y +++ GL G
Sbjct: 580 MRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGA 639
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA+ +L EM G P + + ++ ++RL + + M+ GL + T YN
Sbjct: 640 VEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNT 699
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+V + R + + M+G+G P+T + L+ + ++ A + M+ +
Sbjct: 700 LLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQN 759
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEAL 239
I + L L +G++ EA +EM + G +P+ +++ + + +NK EA+
Sbjct: 760 ISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILVTGHGKQSNKVEAM 819
Query: 240 QNLSNKMALFGPSMIPKREEYLAEMS 265
+ + G +PK Y A +S
Sbjct: 820 RLYCE---MVGKGFVPKVSTYNALIS 842
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 105/222 (47%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ D V+Y LID K + A+K +++ D ++ PD + Y I L ++G+ +A
Sbjct: 514 GLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEA 573
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ +L EM+ G PD + YN I ++C A L+ EM + PN TYN
Sbjct: 574 KSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAG 633
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + + + L M+ G P++ + +++ C + ++++ L + M+ G +
Sbjct: 634 LFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHAD 693
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
I V + L +LC G +A EM+ G P ++F +
Sbjct: 694 ITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNAL 735
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 99/226 (43%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ DI YN L+ V C KA ++E+M I+PD I++ ++I G
Sbjct: 685 MMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSH 744
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A +M P+ A +N + R+ +A ++ EM + GL PN TY++
Sbjct: 745 LDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDI 804
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++ + LYC M+G G +P + L+ + + A +L+ DM ++G
Sbjct: 805 LVTGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRG 864
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
D+L + E +K +M EKG PS+ + I
Sbjct: 865 VHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFI 910
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 104/254 (40%), Gaps = 37/254 (14%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
D++ +N LI YC+ A + ++M + + DV+ Y +++ G GQ D AR VL
Sbjct: 168 DVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVL 227
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
MKE G P+ A Y I YC K + +A L + MV G+ + T +
Sbjct: 228 DMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRD 287
Query: 129 NDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKG----FGS 183
++ L+ M G +PN + C + L K E+ L L +MV +G +
Sbjct: 288 GRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKEL-LSLLGEMVSRGVVMDLVT 346
Query: 184 YILVSD-------------------------------VLFDLLCDMGKLVEAEKSFLEMI 212
Y + D VL D LC + EAE+ LEM
Sbjct: 347 YTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLLEME 406
Query: 213 EKGHKPSQVSFRRI 226
EK P+ V+F +
Sbjct: 407 EKSISPNVVTFSSV 420
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 100/223 (44%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P +++ ++ + R+++ I E M + + D+ Y +++ L G
Sbjct: 650 MVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGM 709
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA VL+EM G PD +NA I +C + L +A +M+ + +SPN T+N
Sbjct: 710 TRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNT 769
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + M +G PN + LV +Q A++L+ +MV KG
Sbjct: 770 LLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILVTGHGKQSNKVEAMRLYCEMVGKG 829
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
F + + L G + +A++ F +M ++G P+ ++
Sbjct: 830 FVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTY 872
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 102/233 (43%), Gaps = 6/233 (2%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISP-DVISYTSIIGGLGLVGQPDK 63
GV D V+ N L+ C++ QV+ A + + R I DVI + ++I G VG
Sbjct: 130 GVPFDGVTVNTLLAGLCRNGQVDAAAALAD--RGGGIHALDVIGWNTLIAGYCRVGDTPA 187
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
A V M G D YN + +C A ++ A G++D M E G+ PN TY F
Sbjct: 188 ALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIV 247
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
+ + + +++LY M+ G L + + LV R + A L+ +M + G
Sbjct: 248 YYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAVP 307
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQ 236
+ L D L G+ E EM+ +G V++ ALM+ KQ
Sbjct: 308 NHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTY---TALMDWLGKQ 357
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 130/323 (40%), Gaps = 53/323 (16%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV D+V+Y L+D K + ++ + +++S + ++YT +I L
Sbjct: 335 MVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHN 394
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A VL EM+E P+ +++ I + L A+ M E+G++PN TY
Sbjct: 395 VDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGT 454
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F+ ++ +Y M+ G N LV ++ K+E A+ L+ D G
Sbjct: 455 LIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSG 514
Query: 181 --------------------------FGSYIL---------VSDVLFDLLCDMGKLVEAE 205
FG ++ V +V + LC +GK EA+
Sbjct: 515 LSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAK 574
Query: 206 KSFLEMIEKGHKPSQVSFRRI-----------KAL-----MELANKQEALQNLSNKMA-L 248
EM G KP Q ++ + KAL M++++ + L + +A L
Sbjct: 575 SILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGL 634
Query: 249 FGPSMIPKREEYLAEMSASDSFS 271
FG + K + L EM S FS
Sbjct: 635 FGTGAVEKAKYLLNEM-VSAGFS 656
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 105/227 (46%), Gaps = 2/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++G P+ V+Y LID K + ++ ++ +M + D+++YT+++ LG G+
Sbjct: 300 MDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGK 359
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+ +D L+ + Y I C A + +A ++ EM EK +SPN T++
Sbjct: 360 TDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSS 419
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGT-GCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
F L + Y RMM G PN + L+ + + + AL++++DM+ +
Sbjct: 420 VINGFVKRGLLDKATE-YKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCE 478
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G + D L + L GK+ EA F + G V++ +
Sbjct: 479 GVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTL 525
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 102/249 (40%), Gaps = 8/249 (3%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
+P V+YN L+ A ++ +M + D ++ +++ GL GQ D A
Sbjct: 100 RPTTVAYNILLAALSDHAH---APAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAA 156
Query: 67 VLKEMKEYGCYP-DAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+ + G + D +N I YC A + D M +GL + YN F
Sbjct: 157 LAD--RGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGF 214
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + ++ + M G PN + F+V C R + VE A L+ MV G
Sbjct: 215 CRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYC-RTKGVEEAFDLYEGMVRNGVLLD 273
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSN 244
++ L LC G+ EA F EM + G P+ V++ + + A + + L +L
Sbjct: 274 VVTLSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLG 333
Query: 245 KMALFGPSM 253
+M G M
Sbjct: 334 EMVSRGVVM 342
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 63/125 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G++P+ ++Y+ L+ + K +A ++ +M + P V +Y ++I G
Sbjct: 790 MEKSGLEPNNLTYDILVTGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGM 849
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A+++ K+M++ G +P + Y+ + + + + + +M EKG SP+ T +
Sbjct: 850 MTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSF 909
Query: 121 FFRVF 125
R F
Sbjct: 910 ICRAF 914
>gi|226509960|ref|NP_001150456.1| LOC100284086 [Zea mays]
gi|195639404|gb|ACG39170.1| ATP binding protein [Zea mays]
Length = 634
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 119/251 (47%), Gaps = 1/251 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+ PD+V +N +I+ + ++ +A K+ E M+ + P+V +YT +I G+
Sbjct: 357 MLEKGMDPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPPPNVWTYTMLIRDHCKQGK 416
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A + +EM+E C PD A Y + Y AK++ + +++EM +KG P+A TYN
Sbjct: 417 MDMAMECFEEMQEAKCQPDVATYTCLLVGYGNAKQMDRVTAVLEEMTQKGCPPDARTYNA 476
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
++ N + +Y +M+ G P + ++K + +W +M ++
Sbjct: 477 LIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFVGDSNYAMGCAVWEEMHQR 536
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
G + V + G+ EA K EMI KG K Q+ + + A A K + L
Sbjct: 537 GICPDVNSYTVFINRHIRHGRPEEAYKYIEEMINKGMKAPQIDYNKFAADFSKAGKPDIL 596
Query: 240 QNLSNKMALFG 250
L+ K+ G
Sbjct: 597 FELAQKVKFAG 607
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 100/222 (45%), Gaps = 7/222 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G + S+NCL+ K+ +A ++ +KM + SPD+ SYT+++
Sbjct: 288 MRKNGFDDGVESFNCLLVALAKEGLGREARQVFDKMHGQ-YSPDLRSYTALMLAWCNARN 346
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A V EM E G PD +N I +R +A + + M KG PN TY +
Sbjct: 347 LVEAGRVWNEMLEKGMDPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPPPNVWTYTM 406
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPN--TQSCMFL-VKLCKRQEKVEIALQLWNDMV 177
R + + + M C P+ T +C+ + K+ ++V L+ +M
Sbjct: 407 LIRDHCKQGKMDMAMECFEEMQEAKCQPDVATYTCLLVGYGNAKQMDRVTAVLE---EMT 463
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
+KG + L LL + +A + + +MI+KG +P+
Sbjct: 464 QKGCPPDARTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPT 505
>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
Length = 545
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 122/247 (49%), Gaps = 10/247 (4%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
M PD+V++ +I+ C+++++++A+ ++E+ PD ++Y I GL + D
Sbjct: 1 MPCSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDD 60
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
A +LK+M E C P Y A + A RL +A ++++MVEKG SP TY +
Sbjct: 61 AFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVID 120
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFG 182
+ + + ++ M+G GC P+ L+K LCK K E A L+ + +
Sbjct: 121 GLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCK-SGKPEEAYALYKEANARKHH 179
Query: 183 SYILVSDV-----LFDLLCDMGKLVEAEKSF-LEMIEKGHKPSQVSFRR-IKALMELANK 235
+ V DV L D LC G+++EA + F E +E+G P V++ I L +L
Sbjct: 180 A-TAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRV 238
Query: 236 QEALQNL 242
+E +
Sbjct: 239 EEGCERF 245
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 115/242 (47%), Gaps = 2/242 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G +PD V+Y LID + K + + KA+++ +M ++Y I+ GL G+
Sbjct: 248 MRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGR 307
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A M+E GC Y+A + +C + A L M+++G PN +YN+
Sbjct: 308 VAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNI 367
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSC-MFLVKLCKRQEKVEIALQLWNDMVEK 179
R + L ++ + +++ P+ + FL LC+R + V ++L+ MV +
Sbjct: 368 IIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQ 427
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANK-QEA 238
G + +L D +C G L A + F EM+ +G P V F + + +A + EA
Sbjct: 428 GTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEA 487
Query: 239 LQ 240
L+
Sbjct: 488 LE 489
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 119/251 (47%), Gaps = 2/251 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G V+YN ++D CK +V +AY M + V++Y++++ G G
Sbjct: 283 MLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGN 342
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A ++ + M + GC P+ +YN IR C A +L A ++++++ L P+ T+N
Sbjct: 343 VSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNA 402
Query: 121 FFRVFYWSNDLRS-SWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
F D S L+ M+ G PN S L+ R +E+AL+++ +MV +
Sbjct: 403 FLHGLCQRLDTVSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSR 462
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
G ++V + L LC G++ EA + F E+ E+ P S+ + + + E
Sbjct: 463 GVAPDVVVFNTLIRWLCIAGRVDEALEVFREL-ERRSAPDAWSYWSLLDGLSRCERMEEA 521
Query: 240 QNLSNKMALFG 250
+ LS M L G
Sbjct: 522 RLLSFHMKLQG 532
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 108/228 (47%), Gaps = 7/228 (3%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVE----KMRDEDISPDVISYTSIIGGLGLVGQ 60
G +PD Y LI CK + E+AY + + + PDV++YTS+I GL G+
Sbjct: 142 GCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLCKAGR 201
Query: 61 PDKARDVLK-EMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+AR V E E G PDA Y + I C R+ + EM +G P+A TY
Sbjct: 202 ILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYA 261
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSC-MFLVKLCKRQEKVEIALQLWNDMVE 178
F + + + +Y +M+ +G + +T + + L LCK +V A + M E
Sbjct: 262 ALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCK-AGRVAEAYATFLAMEE 320
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+G + ++ L D C G + A + F M+++G +P+ VS+ I
Sbjct: 321 RGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNII 368
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 114/271 (42%), Gaps = 43/271 (15%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E P V+Y L+D K ++++A ++E+M ++ SP + +YT +I GL G+
Sbjct: 68 MDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGR 127
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLM----------------- 103
++AR + +M GC PDA Y A I+ C + + +A L
Sbjct: 128 VEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVV 187
Query: 104 -----------------------DEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCR 140
DE VE+G P+A TY + +
Sbjct: 188 TYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHE 247
Query: 141 MMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGK 200
M G P+ + L+ + + + A +++ M++ G + +++ D LC G+
Sbjct: 248 MRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGR 307
Query: 201 LVEAEKSFLEMIEKGHKPSQVSFRRIKALME 231
+ EA +FL M E+G + V++ ALM+
Sbjct: 308 VAEAYATFLAMEERGCVATVVTY---SALMD 335
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P++ SY+ L+D C+ +E A +I +M ++PDV+ + ++I L + G+
Sbjct: 424 MVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGR 483
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A +V +E++ PDA +Y + + +R+ +A L M +G +P Y+L
Sbjct: 484 VDEALEVFRELERRSA-PDAWSYWSLLDGLSRCERMEEARLLSFHMKLQGCAPR--HYDL 540
Query: 121 FFR 123
R
Sbjct: 541 TVR 543
>gi|357118215|ref|XP_003560853.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Brachypodium distachyon]
Length = 597
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 105/214 (49%), Gaps = 1/214 (0%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
+ V+Y+ L+ + V A ++ +M DE SPD I Y ++I GL G+ D A +
Sbjct: 317 NAVTYSTLVGAFLHTNNVGVAMELFHEMVDEGNSPDAIMYFTMISGLTQAGRLDDAWSMA 376
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
MK+ G DA AYN I +C KRL +A L+ EM E GL P+ TYN +
Sbjct: 377 TSMKKAGFQLDAKAYNILIGGFCRRKRLNEAYELLGEMKEAGLQPDVYTYNTLLSGLCKA 436
Query: 129 NDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVS 188
D + L +M+ GC P+ + L+ + +++ AL+++ M E G ++
Sbjct: 437 GDFLAVDELLGKMIDGGCRPSVVTFGTLIHGYCKVGQIDEALRIFRSMDESGIQPNTVIY 496
Query: 189 DVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
+ L D LC A + F EM EK H P+ V+
Sbjct: 497 NTLIDFLCKSRDTSLAIELFDEMREK-HVPANVT 529
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 107/223 (47%), Gaps = 6/223 (2%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G P+ V+YNCL +C+ V A ++V KM E ++P+ ++ +I+GGL VG+ A
Sbjct: 241 GCAPNTVTYNCLAHAFCRAGNVGMACELVAKMEKERVTPNAVTLNTIVGGLCWVGRVGAA 300
Query: 65 RDVLKEMKEYGCYP----DAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ +E + +P +A Y+ + + + A L EMV++G SP+A Y
Sbjct: 301 LEFFREKRT--VWPEARGNAVTYSTLVGAFLHTNNVGVAMELFHEMVDEGNSPDAIMYFT 358
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L +W++ M G + ++ L+ R++++ A +L +M E G
Sbjct: 359 MISGLTQAGRLDDAWSMATSMKKAGFQLDAKAYNILIGGFCRRKRLNEAYELLGEMKEAG 418
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + L LC G + ++ +MI+ G +PS V+F
Sbjct: 419 LQPDVYTYNTLLSGLCKAGDFLAVDELLGKMIDGGCRPSVVTF 461
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 94/200 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G + D +YN LI +C+ +++ +AY+++ +M++ + PDV +Y +++ GL G
Sbjct: 379 MKKAGFQLDAKAYNILIGGFCRRKRLNEAYELLGEMKEAGLQPDVYTYNTLLSGLCKAGD 438
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++L +M + GC P + I YC ++ +A + M E G+ PN YN
Sbjct: 439 FLAVDELLGKMIDGGCRPSVVTFGTLIHGYCKVGQIDEALRIFRSMDESGIQPNTVIYNT 498
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
S D + L+ M N + L+K + + E A +L + M E
Sbjct: 499 LIDFLCKSRDTSLAIELFDEMREKHVPANVTTFNALLKGLRDKNMPEKAFELMDLMREGR 558
Query: 181 FGSYILVSDVLFDLLCDMGK 200
+ D+L + L +G+
Sbjct: 559 CTPDYVTIDILMEWLPVIGE 578
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 106/223 (47%), Gaps = 6/223 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMR--DEDISPDVISYTSIIGGLGLV 58
MR+ V+P++V+Y L+ CK +V A +++ M + D+ PDV+ +I+ GL
Sbjct: 163 MRDASVRPNVVTYGILVKGLCKAGRVGDALSVLDGMSGPESDVCPDVVMLNNIVDGLCKT 222
Query: 59 GQPDKARDVLKE-MKE-YGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNAT 116
G+ +A ++E M+ +GC P+ YN +C A + A L+ +M ++ ++PNA
Sbjct: 223 GRLQQAVKFVEERMRSVHGCAPNTVTYNCLAHAFCRAGNVGMACELVAKMEKERVTPNAV 282
Query: 117 TYNLFFRVFYWSNDLRSSWNLY--CRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWN 174
T N W + ++ + R + N + LV V +A++L++
Sbjct: 283 TLNTIVGGLCWVGRVGAALEFFREKRTVWPEARGNAVTYSTLVGAFLHTNNVGVAMELFH 342
Query: 175 DMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHK 217
+MV++G ++ + L G+L +A M + G +
Sbjct: 343 EMVDEGNSPDAIMYFTMISGLTQAGRLDDAWSMATSMKKAGFQ 385
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 103/234 (44%), Gaps = 9/234 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G PD + Y +I + +++ A+ + M+ D +Y +IGG +
Sbjct: 344 MVDEGNSPDAIMYFTMISGLTQAGRLDDAWSMATSMKKAGFQLDAKAYNILIGGFCRRKR 403
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A ++L EMKE G PD YN + C A L+ +M++ G P+ T+
Sbjct: 404 LNEAYELLGEMKEAGLQPDVYTYNTLLSGLCKAGDFLAVDELLGKMIDGGCRPSVVTFGT 463
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + ++ M +G PNT L+ + +A++L+++M EK
Sbjct: 464 LIHGYCKVGQIDEALRIFRSMDESGIQPNTVIYNTLIDFLCKSRDTSLAIELFDEMREKH 523
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSF--LEMIEKGH-KPSQVSFRRIKALME 231
+ + + L L D EK+F ++++ +G P V+ I LME
Sbjct: 524 VPANVTTFNALLKGLRDKNM---PEKAFELMDLMREGRCTPDYVT---IDILME 571
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 101/239 (42%), Gaps = 9/239 (3%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD ++N L+D + + ++ MRD + P+V++Y ++ GL G+ A V
Sbjct: 135 PDTSAFNTLLDALAQAGDLPGMTQLFASMRDASVRPNVVTYGILVKGLCKAGRVGDALSV 194
Query: 68 LKEMK--EYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVE--KGLSPNATTYNLFFR 123
L M E PD N + C RL+ A ++E + G +PN TYN
Sbjct: 195 LDGMSGPESDVCPDVVMLNNIVDGLCKTGRLQQAVKFVEERMRSVHGCAPNTVTYNCLAH 254
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWND---MVEKG 180
F + ++ + L +M PN + +V +V AL+ + + + +
Sbjct: 255 AFCRAGNVGMACELVAKMEKERVTPNAVTLNTIVGGLCWVGRVGAALEFFREKRTVWPEA 314
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS-FRRIKALMELANKQEA 238
G+ + S ++ L + A + F EM+++G+ P + F I L + +A
Sbjct: 315 RGNAVTYSTLVGAFL-HTNNVGVAMELFHEMVDEGNSPDAIMYFTMISGLTQAGRLDDA 372
Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 23/105 (21%), Positives = 44/105 (41%), Gaps = 35/105 (33%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQV---------------------------------- 26
M E G++P+ V YN LID CK R
Sbjct: 484 MDESGIQPNTVIYNTLIDFLCKSRDTSLAIELFDEMREKHVPANVTTFNALLKGLRDKNM 543
Query: 27 -EKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKE 70
EKA+++++ MR+ +PD ++ ++ L ++G+ D+ + ++
Sbjct: 544 PEKAFELMDLMREGRCTPDYVTIDILMEWLPVIGETDRLKHFMQH 588
>gi|449458524|ref|XP_004146997.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Cucumis sativus]
Length = 481
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 110/221 (49%), Gaps = 6/221 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGL-GL-- 57
MR G+ PD+ + N L + C +V + + + PD+++Y ++I GL GL
Sbjct: 116 MRLAGLSPDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLYGLCK 175
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
VG D+A+++ +EMK G P+ +Y++ + +C A +L ++ L +EMV++G+ PN
Sbjct: 176 VGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQ 235
Query: 118 YNLFFRVFYWS---NDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWN 174
+N+ + DL S+ L+ M GC N S L+ + KVE A+ L+N
Sbjct: 236 FNVLIDILCKEGKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYN 295
Query: 175 DMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
+M + G + L L GK+ +A K F M G
Sbjct: 296 EMPQVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASG 336
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 118/252 (46%), Gaps = 6/252 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQV---EKAYKIVEKMRDEDISPDVISYTSIIGGLGL 57
M + GV+P++V +N LID+ CK+ ++ A K+ M + + ISYT +I G
Sbjct: 224 MVDQGVQPNLVQFNVLIDILCKEGKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCK 283
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
+ + ++A ++ EM + G P+ Y+ + ++ DA+ L M G+S ++
Sbjct: 284 IWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCI 343
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
Y +F + L + L+ + + +S L+ + KVEIA + + +
Sbjct: 344 YVIFLDGLCKNGVLFEAMELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLS 403
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSF---LEMIEKGHKPSQVSFRRIKALMELAN 234
++G ++ +++ C + ++ +A F +M E G P +++ + +N
Sbjct: 404 QEGLQPNVVTCNIMIHGFCRVEQVDKANILFEKMEKMEENGCTPDIITYNTLLRGFCESN 463
Query: 235 KQEALQNLSNKM 246
K E + NL +KM
Sbjct: 464 KLEEVVNLLHKM 475
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 108/239 (45%), Gaps = 10/239 (4%)
Query: 21 CKDRQVE--KAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYP 78
CK ++ +A+ + M P + S+ ++GGL + + + +M+ G P
Sbjct: 64 CKTGNIDVIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNKMRLAGLSP 123
Query: 79 DAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRS---SW 135
D N C R+ + M ++ +G P+ TYN + Y + +
Sbjct: 124 DLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLYGLCKVGHEDEAK 183
Query: 136 NLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLL 195
++ M G +PN S LV K+E + +L+N+MV++G ++ +VL D+L
Sbjct: 184 EIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDIL 243
Query: 196 CDMGK---LVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEALQNLSNKMALFG 250
C GK L A K FL M KG + +++S+ I ++ +EA+ NL N+M G
Sbjct: 244 CKEGKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAM-NLYNEMPQVG 301
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 92/217 (42%), Gaps = 3/217 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G + + +SY LI+ YCK +VE+A + +M P+V +Y++++ GL G+
Sbjct: 262 MPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLLQTGK 321
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A + MK G D+ Y + C L +A L +E+ + +Y+
Sbjct: 322 VGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFKLDFESYSR 381
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVE---IALQLWNDMV 177
+ + +W + ++ G PN +C ++ R E+V+ I + M
Sbjct: 382 LIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKANILFEKMEKME 441
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEK 214
E G I+ + L C+ KL E +M ++
Sbjct: 442 ENGCTPDIITYNTLLRGFCESNKLEEVVNLLHKMFKR 478
>gi|147767652|emb|CAN77908.1| hypothetical protein VITISV_033177 [Vitis vinifera]
Length = 1563
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 126/250 (50%), Gaps = 6/250 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G+ P++ +Y+ +ID C+ Q+ +A+ + +M D P+ I++ +++ G+
Sbjct: 1308 MKMAGIXPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGR 1367
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+K V +MK GC PDA YN I ++C L +A +++ V+KG + NA+++N
Sbjct: 1368 TEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKILNS-VKKGCNLNASSFNP 1426
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F D+ S+ ++ +M C PNT + L+++ ++ ++ L+L +M E
Sbjct: 1427 IFGCISKLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMFADKKSTDMVLKLRKEMDENE 1486
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMI-EKGHKPS----QVSFRRIKALMELANK 235
VL C +G A F EMI EK +PS ++ ++++ +L
Sbjct: 1487 IEPNANTYRVLISTFCGIGHWNNAYSFFKEMIEEKCLRPSLPVYEMVLQQLRKAGQLKKH 1546
Query: 236 QEALQNLSNK 245
+E ++ + N+
Sbjct: 1547 EELVEKMVNR 1556
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 109/223 (48%), Gaps = 2/223 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G KPD ++++ +I K R+ +A + ++D PDV+ YTS++ G G
Sbjct: 1239 MEDYGCKPDKIAFSVVISSLSKKRRAIEAQSFFDSLKDR-FEPDVVVYTSLVHGWCRAGN 1297
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A V EMK G P+ Y+ I C + ++ A + EM++ G PNA T+N
Sbjct: 1298 ISEAERVFGEMKMAGIXPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFNN 1357
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
RV + +Y +M GC P+ + FL++ R + +E A+++ N V+KG
Sbjct: 1358 LMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKILNS-VKKG 1416
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ +F + +G + A + F +M + +P+ V++
Sbjct: 1417 CNLNASSFNPIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVTY 1459
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 107/260 (41%), Gaps = 37/260 (14%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+ E G P+ Y +ID+ K RQ + A+++++ M+ ++ V ++T ++ G
Sbjct: 1171 LEEFGHSPE--PYMEMIDLAGKVRQFDLAWQLIDLMKTRNVEIPVETFTILVRRYVKAGL 1228
Query: 61 PDKARDVLKEMKEYGCYPDAAA----------------------------------YNAA 86
+A M++YGC PD A Y +
Sbjct: 1229 AAEAVHAFNRMEDYGCKPDKIAFSVVISSLSKKRRAIEAQSFFDSLKDRFEPDVVVYTSL 1288
Query: 87 IRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGC 146
+ +C A + +A + EM G+ PN TY++ S + + +++ M+ GC
Sbjct: 1289 VHGWCRAGNISEAERVFGEMKMAGIXPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGC 1348
Query: 147 LPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEK 206
PN + L+++ + + E LQ++N M G + + L + C L EA K
Sbjct: 1349 DPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVK 1408
Query: 207 SFLEMIEKGHKPSQVSFRRI 226
L ++KG + SF I
Sbjct: 1409 -ILNSVKKGCNLNASSFNPI 1427
>gi|356502394|ref|XP_003520004.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 525
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 117/231 (50%), Gaps = 3/231 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ P++ ++N L+D +CK+ ++ +A I+ M + PDV++Y S+I G L+ Q
Sbjct: 209 MMRKGIMPNVQTFNVLVDNFCKEGKISRAKTIMCFMVHVGVEPDVVTYNSVISGHCLLSQ 268
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A V + M G P+ Y++ I +C + + A ++DEMV GL+ + T++
Sbjct: 269 MNDAVKVFELMIHKGLLPNVVTYSSLIHGWCKTRNINKAIFVLDEMVNNGLNLDVVTWST 328
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
F + ++ L+C M LPN Q+C ++ L K Q E A+ L+ M +
Sbjct: 329 LIGGFCKAGRPEAAIELFCTMHEHHQLPNLQTCAIILDGLFKCQFHSE-AISLFRKMEKM 387
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKAL 229
I+ +++ D +C GK +A + F + KG + V++ IK L
Sbjct: 388 NLELNIVTYNIVLDGMCSFGKFNDARELFSCLPSKGIQIDVVAYTTMIKGL 438
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 95/210 (45%)
Query: 10 IVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLK 69
+++Y+ ++D CKD + A M + I PD+++Y S+I GL G+ ++A +L
Sbjct: 148 LIAYSTIMDSLCKDGMLCLALNFFSGMTCKGIQPDLVAYNSLIHGLCSFGRWNEATTLLG 207
Query: 70 EMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSN 129
M G P+ +N + N+C ++ A +M MV G+ P+ TYN +
Sbjct: 208 NMMRKGIMPNVQTFNVLVDNFCKEGKISRAKTIMCFMVHVGVEPDVVTYNSVISGHCLLS 267
Query: 130 DLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSD 189
+ + ++ M+ G LPN + L+ + + A+ + ++MV G ++
Sbjct: 268 QMNDAVKVFELMIHKGLLPNVVTYSSLIHGWCKTRNINKAIFVLDEMVNNGLNLDVVTWS 327
Query: 190 VLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
L C G+ A + F M E P+
Sbjct: 328 TLIGGFCKAGRPEAAIELFCTMHEHHQLPN 357
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 66/125 (52%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +M ++ +IV+YN ++D C + A ++ + + I DV++YT++I GL G
Sbjct: 384 MEKMNLELNIVTYNIVLDGMCSFGKFNDARELFSCLPSKGIQIDVVAYTTMIKGLCKEGL 443
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A D+L +M+E GC P+ YN +R + ++ + M KGLS +ATT L
Sbjct: 444 LDDAEDLLMKMEENGCPPNEFTYNVLVRGLLQRYDISRSTKYLMLMKGKGLSADATTTEL 503
Query: 121 FFRVF 125
F
Sbjct: 504 LISYF 508
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 79/193 (40%), Gaps = 35/193 (18%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ P++V+Y+ LI +CK R + KA ++++M + ++ DV++++++IGG G+
Sbjct: 279 MIHKGLLPNVVTYSSLIHGWCKTRNINKAIFVLDEMVNNGLNLDVVTWSTLIGGFCKAGR 338
Query: 61 PDKARDVLKEMKEYGCYPD-----------------------------------AAAYNA 85
P+ A ++ M E+ P+ YN
Sbjct: 339 PEAAIELFCTMHEHHQLPNLQTCAIILDGLFKCQFHSEAISLFRKMEKMNLELNIVTYNI 398
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
+ C + DA L + KG+ + Y + L + +L +M G
Sbjct: 399 VLDGMCSFGKFNDARELFSCLPSKGIQIDVVAYTTMIKGLCKEGLLDDAEDLLMKMEENG 458
Query: 146 CLPNTQSCMFLVK 158
C PN + LV+
Sbjct: 459 CPPNEFTYNVLVR 471
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 98/260 (37%), Gaps = 36/260 (13%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGL---GLVG 59
+GVKPD+ + +I+ C + + ++ M + P V+++ ++I GL G VG
Sbjct: 35 SLGVKPDVHTLTIVINCLCHLKHTVFGFSVLGAMFKIGVEPTVVTFATLINGLCAEGNVG 94
Query: 60 QPDKARDVLKEMK-EYGCYPDAA--------------------------------AYNAA 86
+ D L++M E Y AY+
Sbjct: 95 AAARFADSLEDMGYESNSYTHGTIINGLCKVGDTAGAISYLEKIEGRNRGFDLLIAYSTI 154
Query: 87 IRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGC 146
+ + C L A M KG+ P+ YN + L MM G
Sbjct: 155 MDSLCKDGMLCLALNFFSGMTCKGIQPDLVAYNSLIHGLCSFGRWNEATTLLGNMMRKGI 214
Query: 147 LPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEK 206
+PN Q+ LV ++ K+ A + MV G ++ + + C + ++ +A K
Sbjct: 215 MPNVQTFNVLVDNFCKEGKISRAKTIMCFMVHVGVEPDVVTYNSVISGHCLLSQMNDAVK 274
Query: 207 SFLEMIEKGHKPSQVSFRRI 226
F MI KG P+ V++ +
Sbjct: 275 VFELMIHKGLLPNVVTYSSL 294
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 64/145 (44%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E P++ + ++D K + +A + KM ++ ++++Y ++ G+ G+
Sbjct: 349 MHEHHQLPNLQTCAIILDGLFKCQFHSEAISLFRKMEKMNLELNIVTYNIVLDGMCSFGK 408
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ AR++ + G D AY I+ C L DA L+ +M E G PN TYN+
Sbjct: 409 FNDARELFSCLPSKGIQIDVVAYTTMIKGLCKEGLLDDAEDLLMKMEENGCPPNEFTYNV 468
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTG 145
R D+ S M G G
Sbjct: 469 LVRGLLQRYDISRSTKYLMLMKGKG 493
>gi|255661036|gb|ACU25687.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
Length = 376
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 113/241 (46%), Gaps = 3/241 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G D ++Y +ID +CK+ + K+ ++E + D +Y+++I GL +
Sbjct: 85 MKKSGFVEDSITYGIIIDGFCKNGYINKSLHVLEIAEGKGGVLDAFAYSAMINGLCKEAK 144
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA VL M + GC P+A YN I + A + DA + EM SP TY+
Sbjct: 145 LDKAVSVLNGMIKSGCKPNAHVYNTLINGFVGASKFDDAIRVFREMGSMDCSPTIVTYHT 204
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+++L M+ G P + L+K + KVE+ALQLWN ++ KG
Sbjct: 205 LINGLCKGERFSEAYDLVKEMLEKGWKPCVITYSLLMKGLCQGHKVEMALQLWNQVLSKG 264
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
F + + ++L LC +GK A + +M P+ V+ LME K ++
Sbjct: 265 FKPDVQMHNILIHGLCSVGKTQHALMLYFDMNHWNCAPNLVTHN---TLMEGFYKDGDIR 321
Query: 241 N 241
N
Sbjct: 322 N 322
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 88/181 (48%), Gaps = 3/181 (1%)
Query: 2 REMG---VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLV 58
REMG P IV+Y+ LI+ CK + +AY +V++M ++ P VI+Y+ ++ GL
Sbjct: 188 REMGSMDCSPTIVTYHTLINGLCKGERFSEAYDLVKEMLEKGWKPCVITYSLLMKGLCQG 247
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
+ + A + ++ G PD +N I C + + A L +M +PN T+
Sbjct: 248 HKVEMALQLWNQVLSKGFKPDVQMHNILIHGLCSVGKTQHALMLYFDMNHWNCAPNLVTH 307
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
N FY D+R++ ++ R++ +G P+ S +K ++ A+ +D +
Sbjct: 308 NTLMEGFYKDGDIRNALVIWARILRSGLQPDIISYNITLKGLCSCNRISFAILFLHDALT 367
Query: 179 K 179
K
Sbjct: 368 K 368
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 100/222 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G KP+ YN LI+ + + + A ++ +M D SP +++Y ++I GL +
Sbjct: 155 MIKSGCKPNAHVYNTLINGFVGASKFDDAIRVFREMGSMDCSPTIVTYHTLINGLCKGER 214
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A D++KEM E G P Y+ ++ C ++ A L ++++ KG P+ +N+
Sbjct: 215 FSEAYDLVKEMLEKGWKPCVITYSLLMKGLCQGHKVEMALQLWNQVLSKGFKPDVQMHNI 274
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + LY M C PN + L++ + + AL +W ++ G
Sbjct: 275 LIHGLCSVGKTQHALMLYFDMNHWNCAPNLVTHNTLMEGFYKDGDIRNALVIWARILRSG 334
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
I+ ++ LC ++ A + + K P+ ++
Sbjct: 335 LQPDIISYNITLKGLCSCNRISFAILFLHDALTKKIFPTIIT 376
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 94/233 (40%), Gaps = 36/233 (15%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
++VS+N ++ + +V+KA I E M+ D I+Y II G G +K+ VL
Sbjct: 58 NVVSFNIMMRGLFDNGEVDKAISIWELMKKSGFVEDSITYGIIIDGFCKNGYINKSLHVL 117
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
+ + G DA AY+A I C +L A +++ M++ G PNA YN F +
Sbjct: 118 EIAEGKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKPNAHVYNTLINGFVGA 177
Query: 129 NDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVS 188
+ + ++ M C P I+
Sbjct: 178 SKFDDAIRVFREMGSMDCSPT-----------------------------------IVTY 202
Query: 189 DVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI-KALMELANKQEALQ 240
L + LC + EA EM+EKG KP +++ + K L + + ALQ
Sbjct: 203 HTLINGLCKGERFSEAYDLVKEMLEKGWKPCVITYSLLMKGLCQGHKVEMALQ 255
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 71/161 (44%), Gaps = 1/161 (0%)
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
G D A+ V EM E PDA YNA + + R++D L + M KG S N ++
Sbjct: 4 GDIDGAKRVYMEMAESKVSPDAVVYNAMLIGFLRVGRIKDCFDLWELMGRKG-SQNVVSF 62
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
N+ R + + ++ + +++ M +G + ++ + ++ + + +L +
Sbjct: 63 NIMMRGLFDNGEVDKAISIWELMKKSGFVEDSITYGIIIDGFCKNGYINKSLHVLEIAEG 122
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
KG + + LC KL +A MI+ G KP+
Sbjct: 123 KGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKPN 163
>gi|356522596|ref|XP_003529932.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Glycine max]
Length = 827
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 117/234 (50%), Gaps = 1/234 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P ++YNC+ID Y K+ ++ A + +M +ISP+VI+YTS+I G + D A +
Sbjct: 569 PTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLALKM 628
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
+MK G D Y I +C + + +A +++E GL+PN YN+ +
Sbjct: 629 HDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNTIVYNIMISAYRN 688
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
N++ ++ NL+ M+ + + L+ ++ K+ AL L+++M+ +G I +
Sbjct: 689 LNNMEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSEMLCRGIVPDIFM 748
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQ 240
+VL + LC+ G+L A K EM P+ + + I + N QEA +
Sbjct: 749 YNVLINGLCNHGQLENAGKILKEMDGNNITPTVLLYNTLIAGHFKEGNLQEAFR 802
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 108/222 (48%), Gaps = 1/222 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+K D SY+ +I C+ ++ A K+VE + P +Y ++IG +G +A
Sbjct: 252 GLKLDAASYSIVIQAVCRGSDLDLASKLVEGDEELGWVPSEGTYAAVIGACVRLGNFGEA 311
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ EM + + A + I+ YC+ + A L DE+VE G++PN +++
Sbjct: 312 LRLKDEMVDSRVPVNVAVATSLIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEW 371
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
++ + LY RM G P FL+K ++Q +E A L + VE G S
Sbjct: 372 CSKIGNVEKANELYTRMKCMGLQPTVFILNFLLKGFRKQNLLENAYLLLDGAVENGIASV 431
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + VL LC++GK+ EA + +MI KG PS VS+ +
Sbjct: 432 VTYNIVLL-WLCELGKVNEACNLWDKMIGKGITPSLVSYNHM 472
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 115/242 (47%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ P +VSYN +I +CK ++ A++++ + + + P+ I+YT ++ G G + A
Sbjct: 461 GITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTILMEGSFKKGDCEHA 520
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++ +M G P +N+ I C R+ +A ++ +++ P + TYN
Sbjct: 521 FNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFIPTSMTYNCIIDG 580
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + S+ ++Y M + PN + L+ + K+++AL++ +DM KG
Sbjct: 581 YVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDDMKRKGLELD 640
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSN 244
I V L C M + A K F +++E G P+ + + + + N EA NL
Sbjct: 641 ITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNTIVYNIMISAYRNLNNMEAALNLHK 700
Query: 245 KM 246
+M
Sbjct: 701 EM 702
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 107/226 (47%), Gaps = 1/226 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ MG++P + N L+ + K +E AY +++ + I+ V++Y ++ L +G+
Sbjct: 388 MKCMGLQPTVFILNFLLKGFRKQNLLENAYLLLDGAVENGIA-SVVTYNIVLLWLCELGK 446
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A ++ +M G P +YN I +C + DA +M+ ++E GL PNA TY +
Sbjct: 447 VNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTI 506
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ D ++N++ +M+ G +P + ++ + +V A N +++
Sbjct: 507 LMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQS 566
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
F + + + D G + AE + EM P+ +++ +
Sbjct: 567 FIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSL 612
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 75/157 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+ E+G+ P+ + YN +I Y +E A + ++M + I D+ YTS+I GL G+
Sbjct: 667 LLEVGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGK 726
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A D+ EM G PD YN I C +L +A ++ EM ++P YN
Sbjct: 727 LSFALDLYSEMLCRGIVPDIFMYNVLINGLCNHGQLENAGKILKEMDGNNITPTVLLYNT 786
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV 157
+ +L+ ++ L+ M+ G +P+ + LV
Sbjct: 787 LIAGHFKEGNLQEAFRLHDEMLDKGLVPDDTTYDILV 823
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 93/218 (42%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ P++++Y LI+ +CK +++ A K+ + M+ + + D+ Y ++I G + + A
Sbjct: 602 ISPNVITYTSLINGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENAC 661
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
++ E G P+ YN I Y + A L EM+ + + Y
Sbjct: 662 KFFSKLLEVGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSLIDGL 721
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
L + +LY M+ G +P+ L+ ++E A ++ +M +
Sbjct: 722 LKEGKLSFALDLYSEMLCRGIVPDIFMYNVLINGLCNHGQLENAGKILKEMDGNNITPTV 781
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
L+ + L G L EA + EM++KG P ++
Sbjct: 782 LLYNTLIAGHFKEGNLQEAFRLHDEMLDKGLVPDDTTY 819
Score = 44.3 bits (103), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 42/211 (19%), Positives = 85/211 (40%)
Query: 13 YNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMK 72
+N L+ Y + ++ +A + M ++ + P V ++ + + A + EM
Sbjct: 155 FNYLLISYVRANKITEAVECFRAMLEDGVVPWVPFVNVLLTAMIRRNMVEDAHRLFDEMA 214
Query: 73 EYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLR 132
E Y D +R + +A + +GL +A +Y++ + +DL
Sbjct: 215 ERRIYGDCYTLQVLMRACLKGGKFVEAERYFGQAAGRGLKLDAASYSIVIQAVCRGSDLD 274
Query: 133 SSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLF 192
+ L G +P+ + ++ C R AL+L ++MV+ + V+ L
Sbjct: 275 LASKLVEGDEELGWVPSEGTYAAVIGACVRLGNFGEALRLKDEMVDSRVPVNVAVATSLI 334
Query: 193 DLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
C G + A + F E++E G P+ F
Sbjct: 335 KGYCVRGDVNSALRLFDEVVEVGVTPNVAIF 365
>gi|242067353|ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
gi|241934796|gb|EES07941.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
Length = 734
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 121/236 (51%), Gaps = 1/236 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV P+IV +N L+ C + E+A ++V +M D+ I P+ + + ++I L VG+ +
Sbjct: 374 GVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEG 433
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
R ++ M+ G PDA +Y I YC+A R +A + D MV GLSP TYN
Sbjct: 434 RRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHG 493
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ ++ + ++ L+ M+ G P + ++ + ++ A +L+ +M+ G
Sbjct: 494 YCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCD 553
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEAL 239
I +++ + LC + EA K F + KG + + ++F I AL++ K++A+
Sbjct: 554 IYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAM 609
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 121/249 (48%), Gaps = 6/249 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDE---DISPDVISYTSIIGGLGL 57
M E+G PD VSY+ L+ +C + + E+A +++ M ++ P+V++YT++I GL
Sbjct: 160 MPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTYTTVIDGLCK 219
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
D+A V ++M + G P+ YN I Y + ++ ++++M +GL P+ T
Sbjct: 220 AQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGLKPDCYT 279
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
Y +++ S +L M+ G P+ + ++ A+ ++N M
Sbjct: 280 YGSLLNYLCALSEMHSFLDL---MVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMR 336
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQE 237
+ G ++ L D LC +G++ +AE F +MI +G P+ V F + + +K E
Sbjct: 337 QHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWE 396
Query: 238 ALQNLSNKM 246
+ L +M
Sbjct: 397 RAEELVYEM 405
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 101/229 (44%), Gaps = 6/229 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+ PD +N Y K ++KA I KMR +SP+V++Y ++I L +G+
Sbjct: 300 MVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGR 359
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A +M G P+ +N+ + C + A L+ EM+++G+ PNA +N
Sbjct: 360 VDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNT 419
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK---LCKRQEKVEIALQLWNDMV 177
+ L M G P+ S L+ L R ++ E ++++ MV
Sbjct: 420 LICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAE---KVFDGMV 476
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G + + L C ++ +A F EM+ KG P V++ I
Sbjct: 477 SIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTI 525
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 105/244 (43%), Gaps = 1/244 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +GV+PD SY LI YC + ++A K+ + M +SP ++Y +++ G +
Sbjct: 440 MEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASR 499
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A + +EM G P YN + KR +A L M+ G + TYN+
Sbjct: 500 IDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNI 559
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
SN + ++ ++ + G N + ++ + + E A+ L+ + G
Sbjct: 560 ILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANG 619
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP-SQVSFRRIKALMELANKQEAL 239
++ ++ + L + G L E + F M + G P SQ+ ++ L+ + A
Sbjct: 620 LVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAG 679
Query: 240 QNLS 243
LS
Sbjct: 680 AYLS 683
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 81/216 (37%), Gaps = 35/216 (16%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G+ P V+YN L+ YC +++ AY + +M + ++P V++Y +I+ GL +
Sbjct: 475 MVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKR 534
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAK-------------------------- 94
+A+++ M G D YN + C +
Sbjct: 535 FSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTI 594
Query: 95 ---------RLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
R DA L + GL PN TY L L +L+ M G
Sbjct: 595 MIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNG 654
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
PN+Q LV+ + + A + + E+ F
Sbjct: 655 TAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNF 690
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/121 (19%), Positives = 55/121 (45%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G++ +I+++ +I K + E A + + + P+V++Y + L G ++
Sbjct: 584 GLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEF 643
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ M++ G P++ NA +R + A + ++ E+ S A+T +L +
Sbjct: 644 DSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSLLISI 703
Query: 125 F 125
F
Sbjct: 704 F 704
>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
Length = 764
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 122/257 (47%), Gaps = 2/257 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G D +YN +ID +CK +V KAY+++E+M+ P V++Y S++ GL + +
Sbjct: 471 MKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDR 530
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + +E K G + Y++ I + R+ +A +M+EM++KGL+PN T+N
Sbjct: 531 LDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNC 590
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ ++ + + M C PN + C+ + LCK + K A W +M ++
Sbjct: 591 LLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVR-KFNKAFVFWQEMQKQ 649
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
G + + L G + +A F G P S+ + + +AN+
Sbjct: 650 GLKPNTITYTAMISGLAKSGNVAQASSLFERFRASGGIPDSASYNAMIEGLSIANRALDA 709
Query: 240 QNLSNKMALFGPSMIPK 256
L + L G S+ K
Sbjct: 710 YQLFEETRLKGCSIHTK 726
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 107/226 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E G+ P++ + N +ID CK +++++A I E M + SPD ++ S+I GLG G+
Sbjct: 296 MKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGR 355
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A + + M + P+ Y + IRN+ R D + EM+ G SP+ N
Sbjct: 356 VDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNT 415
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + + L+ + G LP+T+S L+ + +L+ M ++G
Sbjct: 416 YMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQG 475
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + D C GK+ +A + EM GH P+ V++ +
Sbjct: 476 CVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSV 521
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 97/216 (44%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD ++ LID K +V+ AY+I E+M D D P+V+ YTS+I + + +
Sbjct: 338 PDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKM 397
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
KEM GC PD N + A L +E+ +G P+ +Y++
Sbjct: 398 YKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVK 457
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ R ++ LY M GC+ +T++ ++ + KV A QL +M G ++
Sbjct: 458 AGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVT 517
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ D L + +L EA F E G + +QV +
Sbjct: 518 YGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIY 553
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 103/222 (46%), Gaps = 1/222 (0%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
R G P +V+YNC++ K + +KA +I E+M+ D P++ +Y IIG L G
Sbjct: 228 RAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEMK-RDAMPNLPTYNIIIGMLCKAGNV 286
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
+ A V MKE G +P+ N I C A++L +A + + M K SP+ T+
Sbjct: 287 EAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSL 346
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
+ ++ +Y RM+ +PN L++ + ++ E +++ +M+ G
Sbjct: 347 IDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGC 406
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+++ + D + G+ + F E+ +G P S+
Sbjct: 407 SPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSY 448
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 102/219 (46%), Gaps = 1/219 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E+G + ++ LI V+ ++ +V+ A ++++M+ D++ Y I G VG+
Sbjct: 87 MQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADIVLYNVCIDCFGKVGK 146
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A EMK G PD Y + + C A RL +A + ++M + P A YN
Sbjct: 147 VDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNT 206
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + +++L R GC+P+ + ++ ++ K + AL+++ +M
Sbjct: 207 MIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEMKRDA 266
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
+ + +++ +LC G + A K M E G P+
Sbjct: 267 MPN-LPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPN 304
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 83/169 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ P++ ++NCL+D K ++ +A + M+D +P+ I+Y +I GL V +
Sbjct: 576 MMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVRK 635
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA +EM++ G P+ Y A I + + AS L + G P++ +YN
Sbjct: 636 FNKAFVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSLFERFRASGGIPDSASYNA 695
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIA 169
+N ++ L+ GC +T++C+ L+ + E +E A
Sbjct: 696 MIEGLSIANRALDAYQLFEETRLKGCSIHTKTCVALLDALHKAECLEQA 744
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 92/191 (48%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G++ + V Y+ LID + K +V++AY ++E+M + ++P+V ++ ++ GL + ++A
Sbjct: 545 GIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEA 604
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ MK+ C P+ Y I C ++ A EM ++GL PN TY
Sbjct: 605 LVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAMISG 664
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
S ++ + +L+ R +G +P++ S +++ + A QL+ + KG +
Sbjct: 665 LAKSGNVAQASSLFERFRASGGIPDSASYNAMIEGLSIANRALDAYQLFEETRLKGCSIH 724
Query: 185 ILVSDVLFDLL 195
L D L
Sbjct: 725 TKTCVALLDAL 735
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 94/212 (44%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P++V Y LI + K + E +K+ ++M SPD++ + + + G+ +K R +
Sbjct: 373 PNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRAL 432
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
+E+K G PD +Y+ I + A R+ L M ++G + YN F
Sbjct: 433 FEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCK 492
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
S + ++ L M G P + +V + ++++ A L+ + G ++
Sbjct: 493 SGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVI 552
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
L D +G++ EA EM++KG P+
Sbjct: 553 YSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPN 584
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 96/234 (41%), Gaps = 34/234 (14%)
Query: 11 VSYNC--LIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
+Y C L+ K R++ +A+ +++ MR P +YT++IG L VG+ D+ +
Sbjct: 25 TNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTLIGALSEVGESDRMLALF 84
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
+M+E G + IR + R+ A L+DEM + YN+ F
Sbjct: 85 NQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADIVLYNVCIDCFGKV 144
Query: 129 NDLRSSWNLYCRMMGTGCLPN--TQSCMFLVKLCKRQ---EKVEIALQL----------- 172
+ +W + M G +P+ T + M V LCK E VEI Q+
Sbjct: 145 GKVDMAWKFFHEMKANGLVPDDVTYTSMMGV-LCKANRLDEAVEIFEQMEQNRQVPCAYA 203
Query: 173 WNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+N M+ G+GS GK EA KG PS V++ I
Sbjct: 204 YNTMI-MGYGS--------------AGKFDEAYSLLERQRAKGCIPSVVAYNCI 242
>gi|297839351|ref|XP_002887557.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333398|gb|EFH63816.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 845
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 104/219 (47%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
R+ G K D +Y ++ + +Q +++++M + P+ ++Y +I G
Sbjct: 341 RQPGFKHDGHTYTTMVGNLGRAKQFGAINRLLDEMVKDGCKPNTVTYNRLIHSYGRANYL 400
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
++A +V K+M+E GC PD Y I + A L A + M GLSP+ TY++
Sbjct: 401 NEAMNVFKQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAAGLSPDTFTYSVI 460
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
+ L ++ L+C M+G GC PN + ++ L + E AL+L+ DM GF
Sbjct: 461 INCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGF 520
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQ 220
+ ++ ++L G L EAE F EM K P +
Sbjct: 521 QPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDE 559
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 96/219 (43%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E G +PD V+Y LID++ K ++ A + ++M+ +SPD +Y+ II LG G
Sbjct: 410 MQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAAGLSPDTFTYSVIINCLGKAGH 469
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A + EM GC P+ +N I + A+ A L +M G P+ TY++
Sbjct: 470 LPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSI 529
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
V L + ++ M +P+ LV L + VE A Q + +M+ G
Sbjct: 530 VMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVEKAWQWYQEMLHAG 589
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
+ + L + ++ EA M+ G PS
Sbjct: 590 LRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPS 628
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 114/251 (45%), Gaps = 2/251 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G KP+ V+YN LI Y + + +A + ++M++ PD ++Y ++I G D A
Sbjct: 379 GCKPNTVTYNRLIHSYGRANYLNEAMNVFKQMQEAGCEPDRVTYCTLIDIHAKAGFLDIA 438
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
D+ + M+ G PD Y+ I A L A L EMV +G +PN T+N+ +
Sbjct: 439 MDMYQRMQAAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIAL 498
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + ++ LY M G P+ + ++++ +E A ++ +M K +
Sbjct: 499 HAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPD 558
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSN 244
V +L DL G + +A + + EM+ G +P+ + + + ++ NL
Sbjct: 559 EPVYGLLVDLWGKAGNVEKAWQWYQEMLHAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQ 618
Query: 245 KMALFG--PSM 253
M G PS+
Sbjct: 619 SMLALGLHPSL 629
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 74/160 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P++V++N +I ++ K R E A K+ M++ PD ++Y+ ++ LG G
Sbjct: 480 MVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGF 539
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A V EM+ PD Y + + A + A EM+ GL PN T N
Sbjct: 540 LEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVEKAWQWYQEMLHAGLRPNVPTCNS 599
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLC 160
F + + ++NL M+ G P+ Q+ L+ C
Sbjct: 600 LLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLSCC 639
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 88/208 (42%), Gaps = 16/208 (7%)
Query: 63 KARDVLKEMKEY--------------GCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVE 108
+A VLK+M Y G D Y + N AK+ + L+DEMV+
Sbjct: 318 QANQVLKQMDNYANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINRLLDEMVK 377
Query: 109 KGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEI 168
G PN TYN + +N L + N++ +M GC P+ + L+ + + ++I
Sbjct: 378 DGCKPNTVTYNRLIHSYGRANYLNEAMNVFKQMQEAGCEPDRVTYCTLIDIHAKAGFLDI 437
Query: 169 ALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKA 228
A+ ++ M G V+ + L G L A + F EM+ +G P+ V+F + A
Sbjct: 438 AMDMYQRMQAAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIA 497
Query: 229 LMELANKQEALQNLSNKM--ALFGPSMI 254
L A E L M A F P +
Sbjct: 498 LHAKARNYETALKLYRDMQNAGFQPDKV 525
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 79/161 (49%), Gaps = 8/161 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G +PD V+Y+ +++V +E+A + +M+ ++ PD Y ++ G G
Sbjct: 515 MQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGN 574
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA +EM G P+ N+ + + R+ +A L+ M+ GL P+ TY L
Sbjct: 575 VEKAWQWYQEMLHAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTL 634
Query: 121 FFRVFYWSNDLRSSWNL-YC-RMMGTGCLPNTQSCMFLVKL 159
D RS++++ +C ++M P + MFL+K+
Sbjct: 635 LLSC---CTDARSNFDMGFCGQLMAVSGHP---AHMFLLKM 669
>gi|297606902|ref|NP_001059180.2| Os07g0213300 [Oryza sativa Japonica Group]
gi|215767816|dbj|BAH00045.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255677604|dbj|BAF21094.2| Os07g0213300 [Oryza sativa Japonica Group]
Length = 677
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 110/257 (42%), Gaps = 35/257 (13%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GVKP+IV+YN L+ Y +A I ++ + PD++SYTS++ G QP+KA
Sbjct: 218 GVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKA 277
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSP----------- 113
R+V +MK+ C P+ +YNA I Y A L++A GL+ EM + G+ P
Sbjct: 278 REVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLAA 337
Query: 114 ------------------------NATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPN 149
N YN + + D + LY M + P+
Sbjct: 338 CGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNVKPD 397
Query: 150 TQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFL 209
+ L+ + K +L+ + DMV+ S V L GKL EAE +F
Sbjct: 398 AVTYNILISGSSKLGKYTESLRFFEDMVDSKVSSTKEVYSSLIYSYIKQGKLSEAESTFS 457
Query: 210 EMIEKGHKPSQVSFRRI 226
M + G P +++ +
Sbjct: 458 SMKKSGCFPDVLTYTTL 474
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 101/230 (43%), Gaps = 2/230 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E GV PD+V++N ++ Q KA E M+ +++ D + II L +GQ
Sbjct: 107 MTENGVGPDLVTHNIVLSALKNGAQYSKAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQ 166
Query: 61 PDKARDVLKEMKE--YGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
+A ++ M+E C PD Y + + +YCI ++ + + D MV +G+ PN Y
Sbjct: 167 CGEAIELFNSMRERRTKCPPDVVTYTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAY 226
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
N + R + ++ + G P+ S L+ R + E A +++N M +
Sbjct: 227 NSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKK 286
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKA 228
+ + L D G L EA EM + G +P VS + A
Sbjct: 287 NSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLA 336
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 105/248 (42%), Gaps = 6/248 (2%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
R G+ + V+YN I Y EKA ++ MR+ ++ PD ++Y +I G +G+
Sbjct: 355 RSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNVKPDAVTYNILISGSSKLGKY 414
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
++ ++M + Y++ I +Y +L +A M + G P+ TY
Sbjct: 415 TESLRFFEDMVDSKVSSTKEVYSSLIYSYIKQGKLSEAESTFSSMKKSGCFPDVLTYTTL 474
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
+ + + +W+L+ M G P+ C L++ + + E LQL M +K
Sbjct: 475 IQAYNAGGGWKRAWDLFKEMEVNGIPPDAIICSSLMEAFNKGGEPERVLQLMEFMKKK-- 532
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQN 241
S L F+++ ++ K+ EMIE + S +S + L + N
Sbjct: 533 -SIPLNQKSYFEIIASC-TMIRDWKTASEMIE--YLDSSLSSISVGTLNHVLNFLGKCGK 588
Query: 242 LSNKMALF 249
N M LF
Sbjct: 589 TENMMKLF 596
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 54/115 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MRE VKPD V+YN LI K + ++ + E M D +S Y+S+I G+
Sbjct: 389 MRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKVSSTKEVYSSLIYSYIKQGK 448
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNA 115
+A MK+ GC+PD Y I+ Y + A L EM G+ P+A
Sbjct: 449 LSEAESTFSSMKKSGCFPDVLTYTTLIQAYNAGGGWKRAWDLFKEMEVNGIPPDA 503
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 97/236 (41%), Gaps = 22/236 (9%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G++PD+VS + L+ + RQ+ + I+E R I + ++Y S I G
Sbjct: 319 MEKDGIQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGD 378
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA ++ M+E PDA YN I + ++ ++MV+ +S Y+
Sbjct: 379 YEKALELYTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKVSSTKEVYSS 438
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L + + + M +GC P+ + L++ + A L+ +M G
Sbjct: 439 LIYSYIKQGKLSEAESTFSSMKKSGCFPDVLTYTTLIQAYNAGGGWKRAWDLFKEMEVNG 498
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQ 236
+ D ++C S +E KG +P R+ LME K+
Sbjct: 499 -----IPPDA---IICS---------SLMEAFNKGGEP-----ERVLQLMEFMKKK 532
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 76/169 (44%), Gaps = 2/169 (1%)
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
Q D+AR + EM+E+ C PDA YN+ I + A + R A +M++M+ + P TTYN
Sbjct: 26 QVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIMEDMLRAAIPPTRTTYN 85
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ + + + L +M G P+ + ++ K + A+ + M
Sbjct: 86 NVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYSKAISYFEIMKGA 145
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHK--PSQVSFRRI 226
S +++ L +G+ EA + F M E+ K P V++ I
Sbjct: 146 NVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSI 194
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 97/248 (39%), Gaps = 2/248 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E KPD YN LI + + Q A I+E M I P +Y ++I G G
Sbjct: 37 MQEWRCKPDADIYNSLIHAHSRAGQWRWAINIMEDMLRAAIPPTRTTYNNVINACGAAGN 96
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA ++ K+M E G PD +N + + A + M ++ + T N+
Sbjct: 97 WKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYSKAISYFEIMKGANVTSDTFTLNI 156
Query: 121 FFRVFYWSNDLRSSWNLYCRM--MGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
+ L+ M T C P+ + ++ +VE +++ MV
Sbjct: 157 IIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSIMHSYCIYGQVENCKAIFDLMVA 216
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEA 238
+G I+ + L G EA F + + G +P VS+ + + + E
Sbjct: 217 EGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEK 276
Query: 239 LQNLSNKM 246
+ + NKM
Sbjct: 277 AREVFNKM 284
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 91/216 (42%), Gaps = 2/216 (0%)
Query: 13 YNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMK 72
Y +I +Y + QV++A + +M++ PD Y S+I GQ A +++++M
Sbjct: 14 YGMMIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIMEDML 73
Query: 73 EYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLR 132
P YN I A + A L +M E G+ P+ T+N+
Sbjct: 74 RAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYS 133
Query: 133 SSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG--SYILVSDV 190
+ + + M G +T + ++ + + A++L+N M E+ ++
Sbjct: 134 KAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTS 193
Query: 191 LFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ C G++ + F M+ +G KP+ V++ +
Sbjct: 194 IMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSL 229
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 54/108 (50%), Gaps = 4/108 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G PD+++Y LI Y ++A+ + ++M I PD I +S++ G+
Sbjct: 459 MKKSGCFPDVLTYTTLIQAYNAGGGWKRAWDLFKEMEVNGIPPDAIICSSLMEAFNKGGE 518
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVE 108
P++ +++ MK+ + +Y I + + + + AS EM+E
Sbjct: 519 PERVLQLMEFMKKKSIPLNQKSYFEIIASCTMIRDWKTAS----EMIE 562
>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
Length = 1078
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 110/223 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+KP IV+YN L+D YCK +V++ ++ +M+ +P+ ++Y +I GL G+
Sbjct: 225 MGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGE 284
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A+ ++ EM + G A YN I Y L +A L +EMV KG SP TYN
Sbjct: 285 FEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNS 344
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + + M+ LP+ S L+ R + A L++++
Sbjct: 345 FIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIY 404
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I+ + L D LC G+L A++ +EMI +G P V++
Sbjct: 405 LFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTY 447
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 115/237 (48%), Gaps = 3/237 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISY-TSIIGGLGLVGQPDK 63
G+ PDIV+Y L++ CK + A + ++M E + D +Y T I+G L L G +
Sbjct: 439 GIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKL-GDTSR 497
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
A + +EM G PD YN + C L +AS L+ +MV G+ P+ TY
Sbjct: 498 AFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIH 557
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
+ LR ++ M+ G P+ + L+ + ++E A +++M EKG
Sbjct: 558 AHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILP 617
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEAL 239
++ + L + LC + ++ +A F EM+EKG P++ S+ I + N QEAL
Sbjct: 618 NVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEAL 674
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 84/180 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD++ YN ++D CK +E+A ++++KM + + PD ++YTSII G+
Sbjct: 505 MLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGR 564
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
K R++ EM G P Y I + RL A EM EKG+ PN TYN
Sbjct: 565 LRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNS 624
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++N + M+ G PN S L+ + AL L+ M+++G
Sbjct: 625 LINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRG 684
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 116/256 (45%), Gaps = 2/256 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G P+ V+YN LI+ K + E+A ++ +M + +Y +I G G
Sbjct: 260 MQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGM 319
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + +EM G P A YN+ I C R+ DA + +M+ L P+ +YN
Sbjct: 320 LAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNT 379
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ +L ++ L+ + P + L+ RQ ++E+A QL +M+ +G
Sbjct: 380 LIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEG 439
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF-RRIKALMELANKQEAL 239
I+ +L + C MG L A++ F EM+ +G + ++ RI ++L + A
Sbjct: 440 IAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAF 499
Query: 240 QNLSNKMAL-FGPSMI 254
+A F P +I
Sbjct: 500 SLQEEMLAKGFPPDLI 515
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 94/213 (44%)
Query: 14 NCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKE 73
+ LI VY K VE+ + +KM +SPDV + I+ L KA +V + M E
Sbjct: 168 DLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGE 227
Query: 74 YGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRS 133
+G P YN + +YC +++ L+ EM +G +PN TYN+ +
Sbjct: 228 FGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQ 287
Query: 134 SWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFD 193
+ L M+ TG + + L+ + + AL L +MV KG + +
Sbjct: 288 AKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIY 347
Query: 194 LLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
LC +G++ +A + +M+ P VS+ +
Sbjct: 348 GLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTL 380
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 101/222 (45%), Gaps = 2/222 (0%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ PD+ + N ++ + + KA ++ M + I P +++Y +++ G+ +
Sbjct: 195 LSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGL 254
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
D+L EM+ GC P+ YN I A GL+ EM++ GL +A TYN +
Sbjct: 255 DLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGY 314
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSC-MFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ L + +L M+ G P + F+ LCK ++ A+Q +DM+
Sbjct: 315 FNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLG-RMSDAMQQLSDMLANNLLPD 373
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ + L C +G L++A F E+ P+ V++ +
Sbjct: 374 VVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTL 415
>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 907
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 104/222 (46%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E GV P+I YN LID CK R ++A + ++M + P+ ++Y+ +I G+ D
Sbjct: 360 EFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLD 419
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
A L EM + G P YN+ I +C + A LM EM+ K L P TY
Sbjct: 420 TALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLM 479
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
+ + + LY M G G +P+ + L+ R + A++L+ +M E
Sbjct: 480 GGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVK 539
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
+ +V+ + C+ G + +A + EMIEKG P S+R
Sbjct: 540 PNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYR 581
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 110/226 (48%), Gaps = 14/226 (6%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+KPD V Y +ID K ++A+ I + M +E P+ ++YT++I GL G
Sbjct: 673 MHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGF 732
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVE------KGLSPN 114
++A + +M+ P+ Y C L G M + VE KGL N
Sbjct: 733 VNEAEILCSKMRPGNSVPNQVTYG------CFLDILTKGVGDMKKAVELHNAILKGLLAN 786
Query: 115 ATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLW 173
TYN+ R F + + L RM+G G P+ + ++ +LC+R + V+ A++LW
Sbjct: 787 TATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRND-VKKAIELW 845
Query: 174 NDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
N M EKG + + L C G++ +A + EM+ +G KP+
Sbjct: 846 NSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPN 891
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 106/218 (48%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+KPD+V+Y L+ CK ++ E +++++M SP + +S++ GL G+ ++A
Sbjct: 293 LKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEAL 352
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+++K + E+G P+ YNA I + C + +A L D M + GL PN TY++ +F
Sbjct: 353 NLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMF 412
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
L ++ + M+ G P+ L+ + + A L +M+ K +
Sbjct: 413 CRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTV 472
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ L C GK+ +A + + EM KG PS +F
Sbjct: 473 VTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTF 510
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 90/181 (49%), Gaps = 3/181 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +MG+KP + YN LI+ +CK + A ++ +M ++ + P V++YTS++GG G+
Sbjct: 428 MIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGK 487
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA + EM G P + + A +RDA L EM E + PN TYN+
Sbjct: 488 INKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNV 547
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+ ++ ++ M+ G +P+T S L+ LC + E +++ D + K
Sbjct: 548 MIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEA--KVFVDGLHK 605
Query: 180 G 180
G
Sbjct: 606 G 606
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 99/216 (45%), Gaps = 1/216 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++G+ P+ V+Y+ LID++C+ +++ A + +M D + P V Y S+I G G
Sbjct: 393 MGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGD 452
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A ++ EM P Y + + YC ++ A L EM KG+ P+ T+
Sbjct: 453 ISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTT 512
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + +R + L+ M PN + +++ + + A + N+M+EKG
Sbjct: 513 LLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKG 572
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGH 216
L LC G+ EA K F++ + KG+
Sbjct: 573 IVPDTYSYRPLIHGLCLTGQASEA-KVFVDGLHKGN 607
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 101/223 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E VKP+ V+YN +I+ YC++ + KA++ + +M ++ I PD SY +I GL L GQ
Sbjct: 533 MAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQ 592
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A+ + + + C + Y + +C +L +A + +M +G+ + Y +
Sbjct: 593 ASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGV 652
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
D + L M G P+ ++ + + A +W+ M+ +G
Sbjct: 653 LIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEG 712
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + + LC G + EAE +M P+QV++
Sbjct: 713 CVPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTY 755
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 64/113 (56%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ + +YN LI +C+ ++E+A +++ +M + +SPD I+YT++I L KA
Sbjct: 782 GLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKA 841
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
++ M E G PD AYN I C+A + A+ L +EM+ +GL PN T
Sbjct: 842 IELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPNTET 894
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 101/223 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++ + P++ + + L+ K R A ++ + M + I PDV YT +I L +
Sbjct: 183 MTKVSLLPEVRTLSALLHGLVKFRHFGLAMELFDDMINVGIRPDVYIYTGVIRSLCELKD 242
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A++++ +M+ GC + YN I C +++ +A G+ ++ K L P+ TY
Sbjct: 243 LSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCT 302
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + M+ P+ + LV+ +++ KVE AL L + E G
Sbjct: 303 LVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFG 362
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I V + L D LC EAE F M + G P+ V++
Sbjct: 363 VSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTY 405
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 90/219 (41%), Gaps = 35/219 (15%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G +IV YN LID CK ++V +A I + + +++ PDV++Y +++ GL V +
Sbjct: 253 MEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQE 312
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ +++ EM P AA ++ + ++ +A L+ + E G+SPN YN
Sbjct: 313 FEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNA 372
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + L+ RM G PN
Sbjct: 373 LIDSLCKGRNFDEAELLFDRMGKIGLCPND------------------------------ 402
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
+ +L D+ C GKL A EMI+ G KPS
Sbjct: 403 -----VTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPS 436
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 95/227 (41%), Gaps = 2/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ P I ++ L+ + + A K+ +M + ++ P+ ++Y +I G G
Sbjct: 498 MTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGN 557
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA + L EM E G PD +Y I C+ + +A +D + + N Y
Sbjct: 558 MSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTG 617
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCM-FLVKLCKRQEKVEIALQLWNDMVEK 179
F L + ++ C+ MG + C L+ + + ++ L L +M ++
Sbjct: 618 LLHGFCREGKLEEALSV-CQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDR 676
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G ++ + D G EA + MI +G P++V++ +
Sbjct: 677 GLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAV 723
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV PD ++Y +I C+ V+KA ++ M ++ I PD ++Y ++I G + G+ KA
Sbjct: 817 GVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKA 876
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRN 89
++ EM G P+ I N
Sbjct: 877 TELRNEMLRQGLKPNTETSETTISN 901
>gi|168034142|ref|XP_001769572.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679114|gb|EDQ65565.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 110/226 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G++ DI +YN LID CK Q+E A I+ MR ++ISP+V++Y+++I G G +G
Sbjct: 331 MQRRGIEQDIFTYNTLIDAVCKGGQMELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGC 390
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A + +MKE G PD +YN I Y R DA +M GL + TYN
Sbjct: 391 FEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDMERVGLKADVVTYNA 450
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + L+ +M G +PN + L+ + + A ++ + G
Sbjct: 451 LIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDATSIFVEFKRAG 510
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+++ L D C G + +A EM + G +P+ V++ +
Sbjct: 511 LKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSL 556
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 100/209 (47%), Gaps = 2/209 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR + P++V+Y+ +ID Y K E+A + M++ + PD +SY ++I +G+
Sbjct: 366 MRLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGR 425
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A K+M+ G D YNA I Y + +DA+GL D+M +GL PN TY+
Sbjct: 426 FDDALTACKDMERVGLKADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSA 485
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + + +++ G P+ L+ C + VE A+ L +M + G
Sbjct: 486 LIDAYSKAGMHQDATSIFVEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAG 545
Query: 181 FGSYILVSDVLFDLLCDMGKL--VEAEKS 207
I+ + L D G++ VEA K
Sbjct: 546 IQPNIVTYNSLIDAYGRNGQVDNVEAAKG 574
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 104/224 (46%), Gaps = 1/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDR-QVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVG 59
M++ G KP++++YN +ID K ++KA I E+M+ E + PD I++ S+I
Sbjct: 260 MKKAGCKPNLITYNTIIDACGKGGVDLKKALDIFEEMQKEGVEPDRITFNSLIAVCSRGS 319
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ ++ V EM+ G D YN I C ++ A+ +M M K +SPN TY+
Sbjct: 320 LWEDSQRVFAEMQRRGIEQDIFTYNTLIDAVCKGGQMELAASIMSSMRLKNISPNVVTYS 379
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ + LY M +G P+ S L+ + + + + AL DM
Sbjct: 380 TMIDGYGKLGCFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDMERV 439
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G + ++ + L D GK +A F +M +G P+ +++
Sbjct: 440 GLKADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTY 483
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 95/215 (44%), Gaps = 3/215 (1%)
Query: 14 NCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKE 73
+ +I + +VE A + + + +V +Y++++ G G+ +A V + MK+
Sbjct: 203 SIMISTLGRLGKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKK 262
Query: 74 YGCYPDAAAYNAAIRNYCI--AKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDL 131
GC P+ YN I + C L+ A + +EM ++G+ P+ T+N V +
Sbjct: 263 AGCKPNLITYNTII-DACGKGGVDLKKALDIFEEMQKEGVEPDRITFNSLIAVCSRGSLW 321
Query: 132 RSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVL 191
S ++ M G + + L+ + ++E+A + + M K ++ +
Sbjct: 322 EDSQRVFAEMQRRGIEQDIFTYNTLIDAVCKGGQMELAASIMSSMRLKNISPNVVTYSTM 381
Query: 192 FDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
D +G EA + +M E G +P +VS+ +
Sbjct: 382 IDGYGKLGCFEEAIGLYHDMKESGVRPDRVSYNTL 416
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 42/148 (28%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+ G+KPD+V Y+ LID CK VE A ++++M I P++++Y S+I G GQ
Sbjct: 506 FKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRNGQ 565
Query: 61 PDK------------------------------------------ARDVLKEMKEYGCYP 78
D A V EM+++G P
Sbjct: 566 VDNVEAAKGNMPINVFNKVGDRSTEIICKTLTSQQNANDHTGVLAAVSVFHEMQQFGLKP 625
Query: 79 DAAAYNAAIRNYCIAKRLRDASGLMDEM 106
+ ++A + L++AS L+++M
Sbjct: 626 NVVTFSAILNACSRCSSLQEASVLLEQM 653
>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
Length = 802
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 118/243 (48%), Gaps = 18/243 (7%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD +Y+ +I C+ +VEKA+ + ++M+ ++PDV +YT +I G
Sbjct: 279 MMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGL 338
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++AR EM+ GC + Y A + Y AK+L AS + + M++ G PN TY+
Sbjct: 339 IEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSA 398
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGT----------------GCLPNTQSCMFLVK-LCKRQ 163
+ +++ + +Y +++GT PN + L+ LCK
Sbjct: 399 LVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAH 458
Query: 164 EKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ V+ A +L + M+ G ++ D L D C +GK+ A++ FL M + G+ P+ ++
Sbjct: 459 KVVD-AQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTY 517
Query: 224 RRI 226
+
Sbjct: 518 TSL 520
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 94/206 (45%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ P++V+Y LID CK +V A ++++ M P+ I Y ++I G VG+ D A+
Sbjct: 440 IAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQ 499
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+V M + G P Y + I +RL A ++ +MVE +PN TY
Sbjct: 500 EVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGL 559
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ + + L M GC PN + L+ + KV+++LQL+ M KG
Sbjct: 560 CRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNY 619
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEM 211
+ VL + C G L EA EM
Sbjct: 620 VTYRVLINHCCAAGLLDEAHSLLSEM 645
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 113/240 (47%), Gaps = 16/240 (6%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKM----------------RDEDISPD 44
M + G P+ ++Y+ L+D CK +++KA ++ K+ + I+P+
Sbjct: 384 MIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPN 443
Query: 45 VISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMD 104
V++Y ++I GL + A+++L M GC P+ Y+A I +C ++ +A +
Sbjct: 444 VVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFL 503
Query: 105 EMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQE 164
M + G P TY + L + + +M+ + C PN + ++ R
Sbjct: 504 RMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIG 563
Query: 165 KVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
+ + AL+L + M EKG ++ L D L GK+ + + F++M KG P+ V++R
Sbjct: 564 ECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYR 623
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 114/244 (46%), Gaps = 6/244 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E P++V+Y +ID C+ + +KA K++ M ++ SP+V++YT++I GLG G+
Sbjct: 540 MVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGK 599
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D + + +M GC P+ Y I + C A L +A L+ EM + Y
Sbjct: 600 VDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCS 659
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ F S +S L + G +P L+ + ++E AL+L +M+E
Sbjct: 660 VVQGF--SKKFIASLGLLEELESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEMMELS 717
Query: 181 FGSYILVSDV---LFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQ 236
I D+ L LC +L +A + + E+ KG P F IK L+++
Sbjct: 718 SSLNITSKDMYTSLIQALCLASQLEKAFELYSEITRKGVVPELSVFVCLIKGLIKVNKWN 777
Query: 237 EALQ 240
EALQ
Sbjct: 778 EALQ 781
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 85/185 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G +P+ + Y+ LID +CK +++ A ++ +M P V +YTS+I + +
Sbjct: 470 MLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRR 529
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A VL +M E C P+ Y A I C + A L+ M EKG SPN TY
Sbjct: 530 LDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTA 589
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
S + S L+ +M GC PN + L+ C ++ A L ++M +
Sbjct: 590 LIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTY 649
Query: 181 FGSYI 185
+ Y+
Sbjct: 650 WPKYL 654
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 98/220 (44%), Gaps = 18/220 (8%)
Query: 21 CKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDA 80
C + + A++I++ M + PD +Y+ +I L + +KA + +EMK G PD
Sbjct: 264 CGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDV 323
Query: 81 AAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCR 140
Y I ++C A + A DEM G S N TY + + L + +++ R
Sbjct: 324 YTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNR 383
Query: 141 MMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMV----------------EKGFGS 183
M+ GC PNT + LV LCK E ++ A +++ ++
Sbjct: 384 MIDAGCPPNTITYSALVDGLCKAGE-IQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAP 442
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ L D LC K+V+A++ M+ G +P+ + +
Sbjct: 443 NVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIY 482
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 101/252 (40%), Gaps = 6/252 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR P++V+Y L+ + K +Q+ +I+ M E +P+ + S++
Sbjct: 133 MRCNSCIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARD 192
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRD------ASGLMDEMVEKGLSPN 114
A +LK M + GC P AYN I + C + L A + +EM+ N
Sbjct: 193 YPYAYKLLKRMADCGCPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLN 252
Query: 115 ATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWN 174
F R ++ + MMG G +P+T + ++ KVE A L+
Sbjct: 253 KVNTANFARCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQ 312
Query: 175 DMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELAN 234
+M G + +L D C G + +A F EM G + V++ + A
Sbjct: 313 EMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAK 372
Query: 235 KQEALQNLSNKM 246
+ ++ N+M
Sbjct: 373 QLPQASDIFNRM 384
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 88/203 (43%), Gaps = 6/203 (2%)
Query: 27 EKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAA 86
++A + +MR P+V++Y +++ G Q + ++ M + GC P+ + +N+
Sbjct: 124 DEAISFLHRMRCNSCIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSL 183
Query: 87 IRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRS------SWNLYCR 140
+ +YC A+ A L+ M + G P YN+F +L S + +Y
Sbjct: 184 VHSYCNARDYPYAYKLLKRMADCGCPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEE 243
Query: 141 MMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGK 200
M+ + C+ N + + K ++A Q+ M+ KGF + LC+ K
Sbjct: 244 MLASSCVLNKVNTANFARCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMK 303
Query: 201 LVEAEKSFLEMIEKGHKPSQVSF 223
+ +A F EM G P ++
Sbjct: 304 VEKAFLLFQEMKSVGVNPDVYTY 326
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 89/216 (41%), Gaps = 36/216 (16%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G P++V+Y LID K +V+ + ++ +M + +P+ ++Y +I G
Sbjct: 575 MEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGL 634
Query: 61 PDKARDVLKEMKE---------------------------------YGCYPDAAAYNAAI 87
D+A +L EMK+ +G P A Y I
Sbjct: 635 LDEAHSLLSEMKQTYWPKYLQGYCSVVQGFSKKFIASLGLLEELESHGTVPIAPVYGLLI 694
Query: 88 RNYCIAKRLRDASGLMDEMVEKGLSPNATT---YNLFFRVFYWSNDLRSSWNLYCRMMGT 144
N+ A RL +A L EM+E S N T+ Y + ++ L ++ LY +
Sbjct: 695 DNFSKAGRLEEALELHKEMMELSSSLNITSKDMYTSLIQALCLASQLEKAFELYSEITRK 754
Query: 145 GCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
G +P + L+K + K ALQL + ++G
Sbjct: 755 GVVPELSVFVCLIKGLIKVNKWNEALQLCYSICDEG 790
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 102/243 (41%), Gaps = 9/243 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G D + C CK+ + A ++E+ ED D + T +I GL
Sbjct: 66 MSESGFCMDKFTVGCFAQALCKEGRWSDALVMIER---EDFKLDTVLCTQMISGLMEASL 122
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A L M+ C P+ Y + + K+L +++ M+++G +PN + +N
Sbjct: 123 FDEAISFLHRMRCNSCIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNS 182
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSC-MFLVKLCKRQE-KVEIALQLWNDMVE 178
+ + D ++ L RM GC P + +F+ +C +E L L + E
Sbjct: 183 LVHSYCNARDYPYAYKLLKRMADCGCPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYE 242
Query: 179 KGFGSYILVSDV----LFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELAN 234
+ S +++ V LC MGK A + M+ KG P ++ ++ + A
Sbjct: 243 EMLASSCVLNKVNTANFARCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAM 302
Query: 235 KQE 237
K E
Sbjct: 303 KVE 305
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 95/232 (40%), Gaps = 6/232 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIG---GLGL 57
M + G P+ +N L+ YC R AYK++++M D P ++Y IG G
Sbjct: 168 MMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCPPGYVAYNIFIGSICGGEE 227
Query: 58 VGQPDK---ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPN 114
+ PD A V +EM C + R C + A ++ M+ KG P+
Sbjct: 228 LPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDMAFQIIKVMMGKGFVPD 287
Query: 115 ATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWN 174
+TY+ + + ++ L+ M G P+ + L+ + +E A ++
Sbjct: 288 TSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWFD 347
Query: 175 DMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+M G + ++ L +L +A F MI+ G P+ +++ +
Sbjct: 348 EMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSAL 399
Score = 40.0 bits (92), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 56/115 (48%), Gaps = 3/115 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVIS---YTSIIGGLGL 57
+ G P Y LID + K ++E+A ++ ++M + S ++ S YTS+I L L
Sbjct: 678 LESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEMMELSSSLNITSKDMYTSLIQALCL 737
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLS 112
Q +KA ++ E+ G P+ + + I+ + +A L + ++G++
Sbjct: 738 ASQLEKAFELYSEITRKGVVPELSVFVCLIKGLIKVNKWNEALQLCYSICDEGVN 792
>gi|255578729|ref|XP_002530223.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530270|gb|EEF32170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 517
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 107/198 (54%), Gaps = 3/198 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR GV+ ++V++N LID +CK+ ++ +A K+ +M+ +++P+ I+Y ++I G +G
Sbjct: 277 MRAKGVEANVVTFNSLIDGFCKEGKLHEASKVFSEMKVLNVAPNTITYNTLINGHSQMGN 336
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ R + +EM G D YNA I C + + A+ ++ E+ ++ L PNA+T++
Sbjct: 337 SEMGRRLYEEMSRNGVKADILTYNALILGLCKEGKTKKAAYMVKELDKENLVPNASTFSA 396
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
N+ ++ LY M+ GC PN Q+ LV + E E A + +M E+
Sbjct: 397 LISGQCIRNNSDRAFQLYKSMVRIGCHPNEQTFNMLVSAFCKNEDFEGAFLVLMEMFERC 456
Query: 181 F--GSYILVSDVLFDLLC 196
F GS +L S++ L C
Sbjct: 457 FTPGSDVL-SEIYHGLCC 473
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 95/223 (42%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G P + S N + +V+ A ++MR ISP+V + ++ G+
Sbjct: 172 MKGYGFLPTVESCNAYLSSLLDLHRVDIALAFYKEMRRCRISPNVYTRNMVMRAFCKSGK 231
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA V +EM+ G P+ +YN I YC L A L + M KG+ N T+N
Sbjct: 232 LEKAVQVFEEMESVGISPNDTSYNTLIMGYCRKGLLNSAVKLKNSMRAKGVEANVVTFNS 291
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F L + ++ M PNT + L+ + E+ +L+ +M G
Sbjct: 292 LIDGFCKEGKLHEASKVFSEMKVLNVAPNTITYNTLINGHSQMGNSEMGRRLYEEMSRNG 351
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ IL + L LC GK +A E+ ++ P+ +F
Sbjct: 352 VKADILTYNALILGLCKEGKTKKAAYMVKELDKENLVPNASTF 394
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 82/187 (43%), Gaps = 2/187 (1%)
Query: 40 DISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDA 99
D SP V + S+ L + + A D +MK YG P + NA + + R+ A
Sbjct: 143 DSSPRV--FDSLFKTLAHMKKFRNATDTFLQMKGYGFLPTVESCNAYLSSLLDLHRVDIA 200
Query: 100 SGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKL 159
EM +SPN T N+ R F S L + ++ M G PN S L+
Sbjct: 201 LAFYKEMRRCRISPNVYTRNMVMRAFCKSGKLEKAVQVFEEMESVGISPNDTSYNTLIMG 260
Query: 160 CKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
R+ + A++L N M KG + ++ + L D C GKL EA K F EM P+
Sbjct: 261 YCRKGLLNSAVKLKNSMRAKGVEANVVTFNSLIDGFCKEGKLHEASKVFSEMKVLNVAPN 320
Query: 220 QVSFRRI 226
+++ +
Sbjct: 321 TITYNTL 327
>gi|357160857|ref|XP_003578899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Brachypodium distachyon]
Length = 714
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 105/223 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G+ PD+++YN LI+ YCK +++A + ++ + P V++Y +I G +G
Sbjct: 361 MRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGD 420
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ AR + +EM E C PD Y + C+ + L DEM+ KGL P+ YN
Sbjct: 421 LEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNT 480
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ +++ L MM G +T + L+ + ++ A LW MV G
Sbjct: 481 RISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDG 540
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ L C+ G+L+EA+ F M+ G PS V++
Sbjct: 541 LRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTY 583
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 108/244 (44%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G++PD +YN I + A+++ E+M IS D ++Y +I GL G
Sbjct: 466 MLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGS 525
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A + +M G D Y I +C RL +A + D MV GLSP+ TY +
Sbjct: 526 LKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTI 585
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + +L ++ + +M+ G PN + L+ R + E A Q +++M+E+G
Sbjct: 586 FIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERG 645
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+L D C G V A + + EM +KG P + + + +A+Q
Sbjct: 646 LVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKGIHPDHCTHNALFKGFGEGHMYDAVQ 705
Query: 241 NLSN 244
L N
Sbjct: 706 YLEN 709
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 116/258 (44%), Gaps = 35/258 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
++ G+ P +++YN LID YC+ +E A ++ E+M +ED PDV +YT ++ G +V
Sbjct: 396 LKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRN 455
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
R EM G PD AYN I + +A L +EM+ +G+S + TYN+
Sbjct: 456 LAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNV 515
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTG---------CL------------------------ 147
+ L+ ++ L+ +M+ G CL
Sbjct: 516 LIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASG 575
Query: 148 --PNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
P+ + + R+ + +A + M+E+G + +VL LC MG+ A
Sbjct: 576 LSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAY 635
Query: 206 KSFLEMIEKGHKPSQVSF 223
+ F EM+E+G P++ ++
Sbjct: 636 QHFHEMLERGLVPNKYTY 653
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 120/286 (41%), Gaps = 39/286 (13%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
K +YN LI VEKA ++ +M +E I P V++Y ++I GL G + A+
Sbjct: 297 KASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQV 356
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
EM+ G PD YN+ I YC A L+ A L ++ GL P TYN+ +
Sbjct: 357 KFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYC 416
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNT--------QSCM----------FLVKLCKRQE---- 164
DL + L M CLP+ SCM F L K E
Sbjct: 417 RLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCF 476
Query: 165 -------------KVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEM 211
+ A QL +M+ +G S + +VL D LC G L +A +++M
Sbjct: 477 AYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKM 536
Query: 212 IEKGHKPSQVSFR-RIKALMELANKQEALQNLSNKMALFG--PSMI 254
+ G + V++ I A E EA +N+ + M G PS++
Sbjct: 537 VTDGLRLDCVTYTCLIHAHCERGRLIEA-KNIFDGMVASGLSPSVV 581
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 106/225 (47%), Gaps = 3/225 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKM--RDEDISPDVISYTSIIGGLGLV 58
M ++GV+P I +YN L+D +CK ++++A +++ M R P+ ++Y +I GL
Sbjct: 220 MLQLGVEPSIFTYNTLLDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARK 279
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
G+ +KA ++ M+ A YN I + A L+ EM +G+ P TY
Sbjct: 280 GELEKAAQLVDIMR-LSKKASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTY 338
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
N + + + ++ + M G LP+ + L+ + ++ AL L+ D+
Sbjct: 339 NTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKR 398
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G G +L ++L D C +G L A + EM E+ P ++
Sbjct: 399 AGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTY 443
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 92/225 (40%), Gaps = 5/225 (2%)
Query: 34 EKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIA 93
++M ++P V ++ L + D R V +M + G P YN + ++C A
Sbjct: 183 QEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDSFCKA 242
Query: 94 KRLRDASGLMDEMVEK--GLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQ 151
R+ A L+ +M + G PN TYN+ +L + L M +
Sbjct: 243 GRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIMRLSKKASAFT 302
Query: 152 SCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEM 211
+ L R + VE A L +M +G ++ + L D L G A+ F EM
Sbjct: 303 YNPLITGLLAR-DFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEM 361
Query: 212 IEKGHKPSQVSFRR-IKALMELANKQEALQNLSN-KMALFGPSMI 254
KG P +++ I + N ++AL + K A GP+++
Sbjct: 362 RAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVL 406
>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
Length = 724
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 111/231 (48%), Gaps = 8/231 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G++P++ +YN L+ CK+ +V+ A+K++ +M + PD +SYT++I L +G+
Sbjct: 172 MKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGK 231
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR++ P YNA I C +A L+DEM+ KG+ PN +Y
Sbjct: 232 VKEARELAMSFT-----PSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTT 286
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ S + +M GC PN + L+K + AL W+ M+ +G
Sbjct: 287 IINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREG 346
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALME 231
++ + L LC L +A F +M G P + R AL++
Sbjct: 347 VVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCP---NVRTYSALID 394
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 109/223 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P++V+Y C++DV C++ +AY ++E M+ E+ P+ +++ + I GL G+
Sbjct: 412 MITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGR 471
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A V +M GC+P+ YN + + +R +A GL+ +M +G+ N TYN
Sbjct: 472 VDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNT 531
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + L + L +M+ G P+ + ++ +Q KV IA+QL + +
Sbjct: 532 IIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGK 591
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ I+ L +C + EA M+ +G P+ ++
Sbjct: 592 WHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATW 634
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 109/227 (48%), Gaps = 1/227 (0%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
M P + YN LI+ CK+ E+A++++++M ++ I P+VISYT+II L G +
Sbjct: 240 MSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVEL 299
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
+ VL +M GC P+ + + I+ + + +A D M+ +G+ PN YN
Sbjct: 300 SLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMH 359
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
L + +++ +M GC PN ++ L+ + ++ A ++WN M+ G
Sbjct: 360 GLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHP 419
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKAL 229
++ + D+LC +A M + P+ V+F IK L
Sbjct: 420 NVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGL 466
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 103/222 (46%), Gaps = 1/222 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+RE GV P++V+YN L+ C R + A + +M P+V +Y+++I G G
Sbjct: 343 IRE-GVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGD 401
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A +V M +GC+P+ AY + C A L++ M + PN T+N
Sbjct: 402 LDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNT 461
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + S + + ++ +M +GC PNT + L+ + + A L DM +G
Sbjct: 462 FIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRG 521
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
++ + + C G L EA + +M+ +G KP ++
Sbjct: 522 IELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAIT 563
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 100/226 (44%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ P+++SY +I+ VE + ++ KM SP++ ++TS+I G L G
Sbjct: 272 MMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGG 331
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A D M G P+ AYNA + C + L DA + ++M G PN TY+
Sbjct: 332 SHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSA 391
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + DL + ++ M+ GC PN + +V + R A L +M +
Sbjct: 392 LIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVEN 451
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + LC G++ A K F +M G P+ ++ +
Sbjct: 452 CPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNEL 497
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 106/242 (43%), Gaps = 14/242 (5%)
Query: 11 VSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKE 70
++Y +I+ +R+++ ++++M+ E IS + S+IG G ++A
Sbjct: 77 LTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYR 136
Query: 71 MKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSND 130
M+++ P YN + R + + + M + G+ PN TYN+ + +N
Sbjct: 137 MQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNR 196
Query: 131 LRSSWNLYCRMMGTGCLPNTQSCMFLV----KLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+ + L M GC P+ S L+ KL K +E E+A+ F +
Sbjct: 197 VDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMS---------FTPSVP 247
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLSNK 245
V + L + +C EA + EM+ KG P+ +S+ I AL + N + +L L+
Sbjct: 248 VYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKM 307
Query: 246 MA 247
A
Sbjct: 308 FA 309
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 69/158 (43%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P+ +YN L+D KDR+ +A+ +V+ M I ++++Y +II G G
Sbjct: 482 MGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGM 541
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++L +M G PDA N I YC ++ A LMD + P+ Y
Sbjct: 542 LGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTS 601
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK 158
+ + RM+ G PN + LV+
Sbjct: 602 LISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVR 639
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 57/105 (54%), Gaps = 6/105 (5%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G KPD ++ N +ID YCK +V A ++++++ PD+I+YTS+I G+ ++A
Sbjct: 556 GTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEA 615
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRN------YCIAKRLRDASGLM 103
L+ M G P+ A +N +R+ + A + DAS +M
Sbjct: 616 IVYLRRMLSEGISPNVATWNVLVRHLFSNMGHSGAVQFLDASSIM 660
>gi|255559961|ref|XP_002520999.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539836|gb|EEF41416.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 628
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 102/181 (56%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
KP +VSY+C+ID CKD VE+A + +M+++ I P+V++YTS++ GL + ++A+
Sbjct: 250 KPTVVSYSCIIDSLCKDGLVERAKEFFVEMKEKGIFPNVVTYTSLLHGLCSASEWEEAKR 309
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
+ EM ++G PD ++ I C ++++ASGL D MV++ + P+ TYN+ +
Sbjct: 310 LFIEMVDHGLLPDVVTFSVLIGALCKVGKVKEASGLFDLMVQRYVEPSTRTYNILIEGYC 369
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+ + ++ M+ C + S L+K + +V A+ L+ +M+++G ++
Sbjct: 370 LAGMVDEGKKIFLSMVNKRCQHDAGSYSILMKAYCKDSEVHGAMILYREMMDRGIQPTVI 429
Query: 187 V 187
Sbjct: 430 T 430
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 130/278 (46%), Gaps = 34/278 (12%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ PD+V+++ LI CK +V++A + + M + P +Y +I G L G
Sbjct: 314 MVDHGLLPDVVTFSVLIGALCKVGKVKEASGLFDLMVQRYVEPSTRTYNILIEGYCLAGM 373
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN- 119
D+ + + M C DA +Y+ ++ YC + A L EM+++G+ P TY+
Sbjct: 374 VDEGKKIFLSMVNKRCQHDAGSYSILMKAYCKDSEVHGAMILYREMMDRGIQPTVITYSK 433
Query: 120 ------LFFRVFYWSNDLRS-SWNLY-------CRMMGTGCLPNTQSCMFLVKLCK---- 161
LF + + L S S+++Y C+ GC+ + ++ CK
Sbjct: 434 VGDARKLFGEIQFQDMVLDSISYSIYNVYLDGLCK---NGCVSEALDVFYGLENCKFASN 490
Query: 162 ------------RQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFL 209
R EK+EIA +L+N + + ++ ++ LC +G+ +A FL
Sbjct: 491 VAIFNSLINGMCRSEKLEIAWELFNRLCNEALQPDVVTYTIMIYGLCKVGQPQKAYDLFL 550
Query: 210 EMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMA 247
EM EKG P+ V+F + + L +++ + L +KMA
Sbjct: 551 EMEEKGCAPNVVTFNTLMRGLCLNSERPKIVELLHKMA 588
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 71/129 (55%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
++ +N LI+ C+ ++E A+++ ++ +E + PDV++YT +I GL VGQP KA D+
Sbjct: 490 NVAIFNSLINGMCRSEKLEIAWELFNRLCNEALQPDVVTYTIMIYGLCKVGQPQKAYDLF 549
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
EM+E GC P+ +N +R C+ L+ +M + LSP+A+T + +
Sbjct: 550 LEMEEKGCAPNVVTFNTLMRGLCLNSERPKIVELLHKMAARKLSPDASTLLIVMDILLKD 609
Query: 129 NDLRSSWNL 137
+ NL
Sbjct: 610 ENYHECLNL 618
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 96/216 (44%), Gaps = 6/216 (2%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G +P+ ++ L+ C + ++ +A ++ + M D P I+ +I GL G A
Sbjct: 172 GYRPNTRTFTNLVKGLCLEGKIGEAVRVFKIMGVFDCRPSAITCGVLISGLCRTGNTCNA 231
Query: 65 RDVLKEM----KEYG--CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
+ + M ++G C P +Y+ I + C + A EM EKG+ PN TY
Sbjct: 232 LKLHEAMINGNSDFGINCKPTVVSYSCIIDSLCKDGLVERAKEFFVEMKEKGIFPNVVTY 291
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
+++ + L+ M+ G LP+ + L+ + KV+ A L++ MV+
Sbjct: 292 TSLLHGLCSASEWEEAKRLFIEMVDHGLLPDVVTFSVLIGALCKVGKVKEASGLFDLMVQ 351
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEK 214
+ ++L + C G + E +K FL M+ K
Sbjct: 352 RYVEPSTRTYNILIEGYCLAGMVDEGKKIFLSMVNK 387
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 102/230 (44%), Gaps = 8/230 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G+ + +S N L++ C ++V + + + + + P+ ++T+++ GL L G+
Sbjct: 133 MNSIGLLKNFISLNILLNCLCSVKRVFEGFVVFGMILRKGYRPNTRTFTNLVKGLCLEGK 192
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEK----GLS--PN 114
+A V K M + C P A I C +A L + M+ G++ P
Sbjct: 193 IGEAVRVFKIMGVFDCRPSAITCGVLISGLCRTGNTCNALKLHEAMINGNSDFGINCKPT 252
Query: 115 ATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLW 173
+Y+ + + + M G PN + L+ LC E E A +L+
Sbjct: 253 VVSYSCIIDSLCKDGLVERAKEFFVEMKEKGIFPNVVTYTSLLHGLCSASEWEE-AKRLF 311
Query: 174 NDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+MV+ G ++ VL LC +GK+ EA F M+++ +PS ++
Sbjct: 312 IEMVDHGLLPDVVTFSVLIGALCKVGKVKEASGLFDLMVQRYVEPSTRTY 361
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/220 (20%), Positives = 90/220 (40%), Gaps = 10/220 (4%)
Query: 16 LIDVYCK--DRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKE 73
+++ CK D + +A +M +P + + ++ G L Q + M
Sbjct: 76 FLEINCKSGDFTLHEALHFFNQMIHMQTTPALSRFNNLFGALAKKKQYLHVISMCGRMNS 135
Query: 74 YGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRS 133
G + + N + C KR+ + + ++ KG PN T+ + +
Sbjct: 136 IGLLKNFISLNILLNCLCSVKRVFEGFVVFGMILRKGYRPNTRTFTNLVKGLCLEGKIGE 195
Query: 134 SWNLYCRMMGT-GCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG--FG----SYIL 186
+ ++ ++MG C P+ +C L+ R AL+L M+ FG ++
Sbjct: 196 AVRVF-KIMGVFDCRPSAITCGVLISGLCRTGNTCNALKLHEAMINGNSDFGINCKPTVV 254
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ D LC G + A++ F+EM EKG P+ V++ +
Sbjct: 255 SYSCIIDSLCKDGLVERAKEFFVEMKEKGIFPNVVTYTSL 294
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 66/160 (41%)
Query: 13 YNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMK 72
YN +D CK+ V +A + + + + +V + S+I G+ + + A ++ +
Sbjct: 459 YNVYLDGLCKNGCVSEALDVFYGLENCKFASNVAIFNSLINGMCRSEKLEIAWELFNRLC 518
Query: 73 EYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLR 132
PD Y I C + + A L EM EKG +PN T+N R +++
Sbjct: 519 NEALQPDVVTYTIMIYGLCKVGQPQKAYDLFLEMEEKGCAPNVVTFNTLMRGLCLNSERP 578
Query: 133 SSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQL 172
L +M P+ + + ++ + + E L L
Sbjct: 579 KIVELLHKMAARKLSPDASTLLIVMDILLKDENYHECLNL 618
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 46/78 (58%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
++PD+V+Y +I CK Q +KAY + +M ++ +P+V+++ +++ GL L + K
Sbjct: 521 ALQPDVVTYTIMIYGLCKVGQPQKAYDLFLEMEEKGCAPNVVTFNTLMRGLCLNSERPKI 580
Query: 65 RDVLKEMKEYGCYPDAAA 82
++L +M PDA+
Sbjct: 581 VELLHKMAARKLSPDAST 598
>gi|222623943|gb|EEE58075.1| hypothetical protein OsJ_08937 [Oryza sativa Japonica Group]
Length = 933
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 130/266 (48%), Gaps = 4/266 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR MG+KPD +YN +I +C+ + KA K++ +M+ I P++I+Y +++ GL G
Sbjct: 580 MRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGA 639
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA+ +L EM G P + + ++ ++RL + + M+ GL + T YN
Sbjct: 640 VEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNT 699
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+V + R + + M+G+G P+T + L+ + ++ A + M+ +
Sbjct: 700 LLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQN 759
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI-KALMELANKQEAL 239
I + L L +G++ EA +EM + G +P+ +++ + + +NK EA+
Sbjct: 760 ISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAM 819
Query: 240 QNLSNKMALFGPSMIPKREEYLAEMS 265
+ + G +PK Y A +S
Sbjct: 820 RLYCE---MVGKGFVPKVSTYNALIS 842
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 104/222 (46%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ D V+Y LID K + A+K +++ D ++ PD + Y I L ++G+ +A
Sbjct: 514 GLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEA 573
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ L EM+ G PD + YN I ++C A L+ EM + PN TYN
Sbjct: 574 KSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAG 633
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + + + L M+ G P++ + +++ C + ++++ L + M+ G +
Sbjct: 634 LFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHAD 693
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
I V + L +LC G +A EM+ G P ++F +
Sbjct: 694 ITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNAL 735
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 99/226 (43%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ DI YN L+ V C KA ++E+M I+PD I++ ++I G
Sbjct: 685 MMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSH 744
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A +M P+ A +N + R+ +A ++ EM + GL PN TY++
Sbjct: 745 LDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDI 804
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++ + LYC M+G G +P + L+ + + A +L+ DM ++G
Sbjct: 805 LATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRG 864
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
D+L + E +K +M EKG PS+ + I
Sbjct: 865 VHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFI 910
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 99/223 (44%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P +++ ++ + R+++ I E M + + D+ Y +++ L G
Sbjct: 650 MVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGM 709
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA VL+EM G PD +NA I +C + L +A +M+ + +SPN T+N
Sbjct: 710 TRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNT 769
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + M +G PN + L +Q A++L+ +MV KG
Sbjct: 770 LLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKG 829
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
F + + L G + +A++ F +M ++G P+ ++
Sbjct: 830 FVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTY 872
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 93/216 (43%), Gaps = 3/216 (1%)
Query: 29 AYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIR 88
A + ++M + + DV+ Y +++ G GQ D AR VL MKE G P+ A Y I
Sbjct: 188 ALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIV 247
Query: 89 NYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLP 148
YC K + +A L + MV G+ + T + ++ L+ M G P
Sbjct: 248 YYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAP 307
Query: 149 NTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKS 207
N + C + L K E+ L L +MV +G ++ L D L GK E + +
Sbjct: 308 NHVTYCTLIDSLAKAGRGKEL-LSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDT 366
Query: 208 FLEMIEKGHKPSQVSFR-RIKALMELANKQEALQNL 242
+ P+ V++ I AL + N EA Q L
Sbjct: 367 LRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVL 402
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 98/227 (43%), Gaps = 37/227 (16%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E GV P++ +Y I YC+ + VE+A+ + E M + DV++ ++++ GL G+
Sbjct: 230 MKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGR 289
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + +EM + G P+ Y I + A R ++ L+ EMV +G+ + TY
Sbjct: 290 FSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTA 349
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQE-KVEIALQLWNDMVEK 179
W L K K E K + L +++
Sbjct: 350 LM-----------DW--------------------LGKQGKTDEVKDTLRFALSDNLSPN 378
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G + VL D LC + EAE+ LEM EK P+ V+F +
Sbjct: 379 G-----VTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSV 420
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 131/323 (40%), Gaps = 53/323 (16%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV D+V+Y L+D K + ++ + +++SP+ ++YT +I L
Sbjct: 335 MVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHN 394
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A VL EM+E P+ +++ I + L A+ M E+G++PN TY
Sbjct: 395 VDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGT 454
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F+ ++ +Y M+ G N LV ++ K+E A+ L+ D G
Sbjct: 455 LIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSG 514
Query: 181 --------------------------FGSYIL---------VSDVLFDLLCDMGKLVEAE 205
FG ++ V +V + LC +GK EA+
Sbjct: 515 LSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAK 574
Query: 206 KSFLEMIEKGHKPSQVSFRRI-----------KAL-----MELANKQEALQNLSNKMA-L 248
EM G KP Q ++ + KAL M++++ + L + +A L
Sbjct: 575 SFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGL 634
Query: 249 FGPSMIPKREEYLAEMSASDSFS 271
FG + K + L EM S FS
Sbjct: 635 FGTGAVEKAKYLLNEM-VSAGFS 656
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 106/227 (46%), Gaps = 2/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++G P+ V+Y LID K + ++ ++ +M + D+++YT+++ LG G+
Sbjct: 300 MDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGK 359
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+ +D L+ P+ Y I C A + +A ++ EM EK +SPN T++
Sbjct: 360 TDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSS 419
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGT-GCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
F L + Y RMM G PN + L+ + + + AL++++DM+ +
Sbjct: 420 VINGFVKRGLLDKATE-YKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCE 478
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G + D L + L GK+ EA F + G V++ +
Sbjct: 479 GVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTL 525
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 101/237 (42%), Gaps = 14/237 (5%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLV-----G 59
GV D V+ N L+ C++ QV+ A + ++ I+P + S G L L+ G
Sbjct: 130 GVPFDGVTVNTLLAGLCRNGQVDAAAALADRA--GGITP----WMSSAGTLSLLDIAGFG 183
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
A V M G D YN + +C A ++ A G++D M E G+ PN TY
Sbjct: 184 DTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYT 243
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
F + + + +++LY M+ G L + + LV R + A L+ +M +
Sbjct: 244 PFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKV 303
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQ 236
G + L D L G+ E EM+ +G V++ ALM+ KQ
Sbjct: 304 GAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTY---TALMDWLGKQ 357
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 62/125 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G++P+ ++Y+ L + K +A ++ +M + P V +Y ++I G
Sbjct: 790 MEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGM 849
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A+++ K+M++ G +P + Y+ + + + + + +M EKG SP+ T +
Sbjct: 850 MTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSF 909
Query: 121 FFRVF 125
R F
Sbjct: 910 ICRAF 914
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 102/280 (36%), Gaps = 44/280 (15%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
D S N L+ +C+ R + A ++ R P ++Y ++ L A VL
Sbjct: 72 DPASLNALLYSHCRLRLLRPAIALLRSSR-----PTTVAYNILLAALS---DHAHAPAVL 123
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKR-------------------------LRDASG-- 101
EM + G D N + C + L D +G
Sbjct: 124 AEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRAGGITPWMSSAGTLSLLDIAGFG 183
Query: 102 -------LMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-C 153
+ D M +GL + YN F + + ++ + M G PN +
Sbjct: 184 DTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYT 243
Query: 154 MFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIE 213
F+V C R + VE A L+ MV G ++ L LC G+ EA F EM +
Sbjct: 244 PFIVYYC-RTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDK 302
Query: 214 KGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFGPSM 253
G P+ V++ + + A + + L +L +M G M
Sbjct: 303 VGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVM 342
>gi|413945076|gb|AFW77725.1| ATP binding protein isoform 1 [Zea mays]
gi|413945077|gb|AFW77726.1| ATP binding protein isoform 2 [Zea mays]
gi|413945078|gb|AFW77727.1| ATP binding protein isoform 3 [Zea mays]
Length = 634
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 119/251 (47%), Gaps = 1/251 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+ PD+V +N +I+ + ++ +A K+ E M+ + P+V +YT +I G+
Sbjct: 357 MLEKGMDPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPPPNVWTYTMLIRDHCKQGK 416
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A + +EM+E C PD A Y + Y AK++ + +++EM +KG P+A TYN
Sbjct: 417 MDMAMECFEEMQEAKCQPDVATYTCLLVGYGNAKQMDRVTAVLEEMTQKGCPPDARTYNA 476
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
++ N + +Y +M+ G P + ++K + +W +M ++
Sbjct: 477 LIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFVGDSNYAMGCAVWEEMHQR 536
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
G + V + G+ EA K EMI KG K Q+ + + A A K + L
Sbjct: 537 GICPDVNSYTVFINGHIRHGRPEEAYKYIEEMINKGMKAPQIDYNKFAADFSKAGKPDIL 596
Query: 240 QNLSNKMALFG 250
L+ K+ G
Sbjct: 597 FELAQKVKFAG 607
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 100/222 (45%), Gaps = 7/222 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G + S+NCL+ K+ +A ++ +KM + SPD+ SYT+++
Sbjct: 288 MRKNGFDDGVESFNCLLVALAKEGLGREARQVFDKMHGQ-YSPDLRSYTALMLAWCNARN 346
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A V EM E G PD +N I +R +A + + M KG PN TY +
Sbjct: 347 LVEAGRVWNEMLEKGMDPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPPPNVWTYTM 406
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPN--TQSCMFL-VKLCKRQEKVEIALQLWNDMV 177
R + + + M C P+ T +C+ + K+ ++V L+ +M
Sbjct: 407 LIRDHCKQGKMDMAMECFEEMQEAKCQPDVATYTCLLVGYGNAKQMDRVTAVLE---EMT 463
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
+KG + L LL + +A + + +MI+KG +P+
Sbjct: 464 QKGCPPDARTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPT 505
>gi|388521091|gb|AFK48607.1| unknown [Medicago truncatula]
Length = 506
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 114/222 (51%), Gaps = 2/222 (0%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
V+ + V YN +ID KD+ V A+ + +M + ISPDV++Y+++I G +VG+ A
Sbjct: 204 VQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAI 263
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
D+ +M PD +N + +C RL+ A ++D M+ + + PN +T+N F
Sbjct: 264 DLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGF 323
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
++ ++ MM G PN + C + C ++ V A +++N M ++G +
Sbjct: 324 CKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQ-VNKAKKIFNTMSQRGVTAN 382
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ +++ + C + K+ +A K F+EM K P V++ +
Sbjct: 383 VHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSL 424
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 97/209 (46%), Gaps = 12/209 (5%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+KP++ ++N L+D +CKDR++++ + M + I P+V++Y S++ G LV Q +KA+
Sbjct: 309 IKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAK 368
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+ M + G + +YN I +C K++ A L EM K + P+ TYN
Sbjct: 369 KIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGL 428
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
S + ++ L M G PN + I L + ++G +
Sbjct: 429 CKSGKISYAFQLVNEMHDRGQPPNIITYN------------SILNALLTKLKDQGIQPNM 476
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEK 214
+L LC GKL A K F +++ K
Sbjct: 477 HTDTILIKGLCQSGKLEAARKVFEDLLVK 505
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 87/179 (48%), Gaps = 12/179 (6%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+KP++V+Y L+D YC +QV KA KI M ++ +V SY +I G + +
Sbjct: 339 MMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKK 398
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA + EM PD YN+ I C + ++ A L++EM ++G PN TYN
Sbjct: 399 VDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNS 458
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
L ++ G PN + L+K + K+E A +++ D++ K
Sbjct: 459 ILNA------------LLTKLKDQGIQPNMHTDTILIKGLCQSGKLEAARKVFEDLLVK 505
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 107/221 (48%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
+MG +PDI++ N I +C Q+ +A +K+ D +SY ++I GL VG+
Sbjct: 131 KMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETR 190
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
A +L+ + +A YN I K + DA L EMV K +SP+ TY+
Sbjct: 191 AALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALI 250
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
R F+ L+ + +L+ +M+ P+ + LV ++ +++ A + + M+ +
Sbjct: 251 RGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIK 310
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + L D C K+ E + F M+++G KP+ V++
Sbjct: 311 PNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTY 351
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 114/235 (48%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ PD+V+Y+ LI + +++ A + KM E+I PDV ++ ++ G G+ KA+
Sbjct: 239 ISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAK 298
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+VL M P+ + +N + +C +++++ + M+++G+ PN TY +
Sbjct: 299 NVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGY 358
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ + ++ M G N S ++ + +KV+ A++L+ +M K +
Sbjct: 359 CLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDV 418
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ + L D LC GK+ A + EM ++G P+ +++ I + K + +Q
Sbjct: 419 VTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSILNALLTKLKDQGIQ 473
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 88/212 (41%)
Query: 13 YNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMK 72
+N ++ K + + ++M E I+P+ +++ +I +G A VL ++
Sbjct: 71 FNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKIL 130
Query: 73 EYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLR 132
+ G PD N I+ +C+ ++ A D++V G + +Y + R
Sbjct: 131 KMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETR 190
Query: 133 SSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLF 192
++ L R+ G N ++ + + V A L+++MV K ++ L
Sbjct: 191 AALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALI 250
Query: 193 DLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
+GKL +A F +MI + KP +F
Sbjct: 251 RGFFIVGKLKDAIDLFNKMILENIKPDVYTFN 282
>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Glycine max]
Length = 570
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 116/266 (43%), Gaps = 2/266 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G PDIV+YN LI C ++ A + ++ E+ P V++YT +I L G
Sbjct: 152 MKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQLLKENCKPTVVTYTILIEATLLQGG 211
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A +L EM E PD YN+ IR C + A ++ + KG +P+ TYN+
Sbjct: 212 IDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDVITYNI 271
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
R + + L M+ GC N + L+ R KVE + L DM +KG
Sbjct: 272 LLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKG 331
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
D L LC G++ A + MI G P V++ I A + + +
Sbjct: 332 LKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEAL 391
Query: 241 NLSNKMALFGPSMIPKREEYLAEMSA 266
++ K+ G S P Y + SA
Sbjct: 392 SIFEKLGEVGCS--PNASSYNSMFSA 415
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 107/212 (50%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
PD+++YN +I +C+ +++ AY+++++M+++ SPD+++Y +IG L G D A +
Sbjct: 123 HPDLIAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALE 182
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
++ + C P Y I + + +A L+DEM+E L P+ TYN R
Sbjct: 183 FKNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMC 242
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+ ++ + + G P+ + L++ Q K E +L +DMV +G + ++
Sbjct: 243 REGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVV 302
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
VL +C GK+ E +M +KG KP
Sbjct: 303 TYSVLISSVCRDGKVEEGVGLLKDMKKKGLKP 334
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 114/227 (50%), Gaps = 2/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E+ ++PD+ +YN +I C++ V++A++I+ + + +PDVI+Y ++ GL G+
Sbjct: 222 MLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGK 281
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ +++ +M GC + Y+ I + C ++ + GL+ +M +KGL P+ Y+
Sbjct: 282 WEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDP 341
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ + + M+ GC+P+ + L LCK Q++ + AL ++ + E
Sbjct: 342 LIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCK-QKRADEALSIFEKLGEV 400
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G + +F L G V A LEM++KG P +++ +
Sbjct: 401 GCSPNASSYNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYNSL 447
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 114/225 (50%), Gaps = 2/225 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G + ++V+Y+ LI C+D +VE+ +++ M+ + + PD Y +I L G+
Sbjct: 292 MVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGR 351
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A +VL M GC PD YN + C KR +A + +++ E G SPNA++YN
Sbjct: 352 VDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNS 411
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDM-VEK 179
F + + + + M+ G P+ + L+ R V+ A++L DM +E
Sbjct: 412 MFSALWSTGHKVRALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMES 471
Query: 180 GFGSYILVS-DVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+VS +++ LC + ++ +A + M++KG +P++ ++
Sbjct: 472 SECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTY 516
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 94/203 (46%), Gaps = 1/203 (0%)
Query: 21 CKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDA 80
CK ++ + + ++ PDV+ T +I GL DKA V+ ++ +G +PD
Sbjct: 68 CKAGNFNESLYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMHILENHG-HPDL 126
Query: 81 AAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCR 140
AYNA I +C A R+ A ++D M KG SP+ TYN+ L S+ +
Sbjct: 127 IAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQ 186
Query: 141 MMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGK 200
++ C P + L++ Q ++ A++L ++M+E + + + +C G
Sbjct: 187 LLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGY 246
Query: 201 LVEAEKSFLEMIEKGHKPSQVSF 223
+ A + + KG+ P +++
Sbjct: 247 VDRAFQIISSISSKGYAPDVITY 269
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 54/109 (49%), Gaps = 2/109 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDE--DISPDVISYTSIIGGLGLV 58
M + GV PD ++YN LI C+D V++A +++ M E + P V+SY ++ GL V
Sbjct: 432 MLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCKV 491
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMV 107
+ A +VL M + GC P+ Y I L DA L +V
Sbjct: 492 SRVSDAIEVLAAMVDKGCRPNETTYTFLIEGIGFGGCLNDARDLATTLV 540
>gi|302820653|ref|XP_002991993.1| hypothetical protein SELMODRAFT_42424 [Selaginella moellendorffii]
gi|300140235|gb|EFJ06961.1| hypothetical protein SELMODRAFT_42424 [Selaginella moellendorffii]
Length = 331
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 112/219 (51%), Gaps = 3/219 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E PD+ YN +I+ + Q+ AY + E+M + + P+ +++ ++ G G
Sbjct: 115 MNEESFLPDVGIYNRIIEAM-SELQLHGAYLLFEQMIEAGVLPNSATFSFLVRGCFKRGF 173
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+ ++L++M E GC P+ A +NA I C +R+ +A +M+EM +G SP+A T+
Sbjct: 174 LDEGSELLRQMVESGCVPELATFNAVIEGLCKVRRVENARWVMNEMASQGCSPDAATHRF 233
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEK 179
+ L + RM+ TGCLP+T + FL+ KLCK +E A +++ +M+
Sbjct: 234 LLEALCKMDKLDEAHRHVQRMIATGCLPDTVTYSFLIKKLCKEGRPME-AHRIFKEMIGI 292
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
G + ++L C K + F +M E+G P
Sbjct: 293 GREPDSSIYNLLLASHCAASKATACYELFTQMKERGVLP 331
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 108/227 (47%), Gaps = 10/227 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKA---YKIVEKMRDEDISPDVISYTSIIGGLGL 57
M +MG D+ +N ++ + ++V+ A + +EK RD D+ SY+ ++ L
Sbjct: 46 MEKMGFHIDVGLHNAILRGLIRAKRVDDALDHFAKMEKNRDTDLE----SYSIVVSALCD 101
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
+ DKA D+L M E PD YN I +L A L ++M+E G+ PN+ T
Sbjct: 102 EKRVDKAVDLLYSMNEESFLPDVGIYNRIIEAMS-ELQLHGAYLLFEQMIEAGVLPNSAT 160
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDM 176
++ R + L L +M+ +GC+P + +++ LCK + +VE A + N+M
Sbjct: 161 FSFLVRGCFKRGFLDEGSELLRQMVESGCVPELATFNAVIEGLCKVR-RVENARWVMNEM 219
Query: 177 VEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+G L + LC M KL EA + MI G P V++
Sbjct: 220 ASQGCSPDAATHRFLLEALCKMDKLDEAHRHVQRMIATGCLPDTVTY 266
>gi|356557791|ref|XP_003547194.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 793
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 119/246 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD+V+Y ++D +C+ ++++A KI+++M P+ +SYT+++ GL G+
Sbjct: 437 MYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGK 496
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR+++ +E+ P+A Y A + +L +A L EMVEKG P NL
Sbjct: 497 SLEAREMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVEKGFFPTPVEINL 556
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + + + GC N + ++ + +E AL + +DM G
Sbjct: 557 LIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLDDMYLSG 616
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ LFD L G+L EA + ++M+ KG P+ V++R + + + +
Sbjct: 617 KHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTYRSVIHRYSQWGRVDDML 676
Query: 241 NLSNKM 246
NL KM
Sbjct: 677 NLLEKM 682
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 113/241 (46%), Gaps = 7/241 (2%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD V+YN LI + K + A +++ +D+ D + Y++I+ G+ D+A+ +
Sbjct: 374 PDQVTYNTLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSL 433
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
+ +M GC PD Y A + +C R+ +A ++ +M + G PN +Y
Sbjct: 434 VIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGLCH 493
Query: 128 SN---DLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
S + R N+ T PN + ++ +R+ K+ A L +MVEKGF
Sbjct: 494 SGKSLEAREMINVSEEHWWT---PNAITYGAVMHGLRREGKLSEACDLTREMVEKGFFPT 550
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLS 243
+ ++L LC K+VEA+K E + KG + V+F I ++ + + AL L
Sbjct: 551 PVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLD 610
Query: 244 N 244
+
Sbjct: 611 D 611
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 106/224 (47%), Gaps = 1/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ GV+P + N I V K ++EKA K +E+M+ I PD+++Y S+I G + +
Sbjct: 261 MQKAGVEPSLSICNTTIYVLVKGGKLEKALKFLERMQVTGIKPDIVTYNSLIKGYCDLNR 320
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMV-EKGLSPNATTYN 119
+ A +++ + GC PD +Y + C K++ + LM++MV L P+ TYN
Sbjct: 321 IEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLMEKMVWNSNLIPDQVTYN 380
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ + G + +V ++ +++ A L DM +
Sbjct: 381 TLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSR 440
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G ++ + D C +G++ EA+K +M + G KP+ VS+
Sbjct: 441 GCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSY 484
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 99/224 (44%), Gaps = 1/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G+KPDIV+YN LI YC ++E A +++ + + PD +SY +++G L +
Sbjct: 296 MQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKK 355
Query: 61 PDKARDVLKEMK-EYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
++ + ++++M PD YN I DA + E +KG + Y+
Sbjct: 356 IEEVKCLMEKMVWNSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYS 415
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
F + + +L M GC P+ + +V R +++ A ++ M +
Sbjct: 416 AIVHSFCQKGRMDEAKSLVIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKH 475
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G + L + LC GK +EA + E P+ +++
Sbjct: 476 GCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITY 519
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 111/266 (41%), Gaps = 40/266 (15%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G KP+ VSY L++ C + +A +++ + +P+ I+Y +++ GL G+
Sbjct: 472 MYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGAVMHGLRREGK 531
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLS-------- 112
+A D+ +EM E G +P N I++ C +++ +A ++E + KG +
Sbjct: 532 LSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTT 591
Query: 113 ---------------------------PNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
P+A TY F L + L +M+ G
Sbjct: 592 VIHGFCQIGDMEAALSVLDDMYLSGKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKG 651
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
P + ++ + +V+ L L M+++ + V + + + LCD G L EAE
Sbjct: 652 LDPTPVTYRSVIHRYSQWGRVDDMLNLLEKMLKR--QPFRTVYNQVIEKLCDFGNLEEAE 709
Query: 206 KSFLEMIEKGHKPSQVSFRRIKALME 231
K +++ S+V LME
Sbjct: 710 KLLGKVLRTA---SKVDANTCHVLME 732
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 97/211 (45%), Gaps = 2/211 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G ++V++ +I +C+ +E A +++ M PD ++YT++ LG G+ D+A
Sbjct: 581 GCAINVVNFTTVIHGFCQIGDMEAALSVLDDMYLSGKHPDAVTYTALFDALGKKGRLDEA 640
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+++ +M G P Y + I Y R+ D L+++M+++ P T YN
Sbjct: 641 AELIVKMLSKGLDPTPVTYRSVIHRYSQWGRVDDMLNLLEKMLKR--QPFRTVYNQVIEK 698
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+L + L +++ T + +C L++ ++ A ++ M +
Sbjct: 699 LCDFGNLEEAEKLLGKVLRTASKVDANTCHVLMESYLKKGVAISAYKVACRMFRRNLTPD 758
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
+ + + + L GKLVEA+ L +E+G
Sbjct: 759 LKLCEKVSKKLVLDGKLVEADNLMLRFVERG 789
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/227 (20%), Positives = 97/227 (42%), Gaps = 1/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G++ ++ ++ Y + ++ A +++ M+ + P + + I L G+
Sbjct: 226 MTRRGIECPPEAFGYVMVSYSRAGKLRNALRVLTLMQKAGVEPSLSICNTTIYVLVKGGK 285
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA L+ M+ G PD YN+ I+ YC R+ DA L+ + KG P+ +Y
Sbjct: 286 LEKALKFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYT 345
Query: 121 FFRVFYWSNDLRSSWNLYCRMM-GTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ L +M+ + +P+ + L+ + + + AL + +K
Sbjct: 346 VMGFLCKEKKIEEVKCLMEKMVWNSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAQDK 405
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
GF + + C G++ EA+ ++M +G P V++ I
Sbjct: 406 GFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRGCNPDVVTYTAI 452
Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 88/219 (40%), Gaps = 49/219 (22%)
Query: 44 DVISYTSIIGGLGLVGQPDKARDVLKEMKEYG--CYPDAAAYNAAIRNYCIAKRLRDASG 101
DV+S T + G AR VL+ M G C P+A Y + +Y A +LR+A
Sbjct: 208 DVLSKTKLCQG---------ARRVLRLMTRRGIECPPEAFGY--VMVSYSRAGKLRNALR 256
Query: 102 LMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCK 161
++ M + G+ P+ + N V L + RM TG P+ +
Sbjct: 257 VLTLMQKAGVEPSLSICNTTIYVLVKGGKLEKALKFLERMQVTGIKPDIVT--------- 307
Query: 162 RQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQV 221
+N ++ KG+ CD+ ++ +A + + KG P +V
Sbjct: 308 -----------YNSLI-KGY--------------CDLNRIEDALELIAGLPSKGCPPDKV 341
Query: 222 SFRRIKALMELANKQEALQNLSNKMALFGPSMIPKREEY 260
S+ + + K E ++ L KM ++ ++IP + Y
Sbjct: 342 SYYTVMGFLCKEKKIEEVKCLMEKM-VWNSNLIPDQVTY 379
>gi|242052075|ref|XP_002455183.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
gi|241927158|gb|EES00303.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
Length = 892
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 116/231 (50%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E+G+ P++ + N LID CKDR+ +A ++ M + + P+ ++Y +I L G D
Sbjct: 328 ELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMD 387
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
A + M+E G YN+ I YC A GL++EMVEKGL+P+A +Y+
Sbjct: 388 DALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLI 447
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
DL S+ L+ M G N + L+ + ++ A +L++ M++
Sbjct: 448 AGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVV 507
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELA 233
+ +V+ + C +G + +A + + +M+++G P ++R + +++ L
Sbjct: 508 PNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLT 558
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 106/223 (47%), Gaps = 1/223 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR GVK D++S+ ++ K EK + +M+++ + PD + +T +I
Sbjct: 606 MRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKEEN 665
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + +M GC P+ Y I + C + L A L +EM+ PN+ TYN
Sbjct: 666 IVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNC 725
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F +L + L+ ++ GCL NT + L+K + +++ A+ L + E G
Sbjct: 726 FLDFLANEGELEKAKVLHATIL-EGCLANTVTFNTLIKGFCKAGQIQGAIDLMQNNTESG 784
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
F + + + LC +G + +A + + EM+ KG KP V++
Sbjct: 785 FFPDCISYSTIINELCKVGDINKAFQLWNEMLYKGLKPDIVAY 827
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 113/278 (40%), Gaps = 40/278 (14%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+ D V+Y L+ +C+ ++E A ++ + M P V S + ++ GL G
Sbjct: 256 MVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGH 315
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA + + E G P+ A NA I C +R R+A L M +GL PN TY +
Sbjct: 316 IDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAI 375
Query: 121 F------------------------FRVFYWSNDLRSSWNLYCR-------------MMG 143
RV + + S N YC+ M+
Sbjct: 376 LIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYN--SLINGYCQHDNFHQARGLLNEMVE 433
Query: 144 TGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVE 203
G P+ S L+ R+ + A++L +M G + L C G + E
Sbjct: 434 KGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDE 493
Query: 204 AEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEALQ 240
A + F +MI+ P++V+F I+ + N ++A Q
Sbjct: 494 AARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQ 531
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 93/211 (44%), Gaps = 34/211 (16%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E GVKPD V + C+IDV+ K+ + +A +KM + SP+V++YT +I L G
Sbjct: 641 MKEKGVKPDNVFHTCMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGY 700
Query: 61 PDKARDVLKEMK---------EYGCYPDAAA-------------------------YNAA 86
A+ + +EM Y C+ D A +N
Sbjct: 701 LSSAQILCEEMLVGRFLPNSFTYNCFLDFLANEGELEKAKVLHATILEGCLANTVTFNTL 760
Query: 87 IRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGC 146
I+ +C A +++ A LM E G P+ +Y+ D+ ++ L+ M+ G
Sbjct: 761 IKGFCKAGQIQGAIDLMQNNTESGFFPDCISYSTIINELCKVGDINKAFQLWNEMLYKGL 820
Query: 147 LPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
P+ + L++ C + + L +++DMV
Sbjct: 821 KPDIVAYNILIRWCNIHGEFDKGLGIYSDMV 851
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 91/202 (45%)
Query: 22 KDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAA 81
K RQ A + ++M D YT+ I + D AR +L M+ G A
Sbjct: 172 KIRQFALARDLFDEMVQCKFPLDEYVYTAGIRAYCEIRNLDGARGLLTRMESKGVKGSAV 231
Query: 82 AYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRM 141
YN + C R+ +A + + MVE+G+ + TY F + +L + + M
Sbjct: 232 PYNVLMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDM 291
Query: 142 MGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKL 201
+ +P+ SC F+V +++ ++ A +L + E G + + L D LC +
Sbjct: 292 LSLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRF 351
Query: 202 VEAEKSFLEMIEKGHKPSQVSF 223
EAE+ F M +G +P++V++
Sbjct: 352 REAERLFRGMANRGLEPNEVTY 373
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 104/260 (40%), Gaps = 38/260 (14%)
Query: 2 REM---GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLV 58
REM GV ++ ++ LI +CKD +++A ++ +KM D + P+ +++ +I G V
Sbjct: 464 REMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRV 523
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIR------------------------------ 88
G KA + +M + G PD Y + I
Sbjct: 524 GNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSL 583
Query: 89 -----NYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMG 143
+C RL + + DEM +G+ + ++ + +D L+ M
Sbjct: 584 TTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKE 643
Query: 144 TGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVE 203
G P+ ++ + ++E + AL W+ M+ G ++ VL + LC G L
Sbjct: 644 KGVKPDNVFHTCMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSS 703
Query: 204 AEKSFLEMIEKGHKPSQVSF 223
A+ EM+ P+ ++
Sbjct: 704 AQILCEEMLVGRFLPNSFTY 723
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 87/204 (42%), Gaps = 2/204 (0%)
Query: 13 YNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMK 72
Y I YC+ R ++ A ++ +M + + + Y ++ GL + +A +V M
Sbjct: 198 YTAGIRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMV 257
Query: 73 EYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLR 132
E G D Y + +C + L A + D+M+ P+ + + +
Sbjct: 258 ERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHID 317
Query: 133 SSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVL 191
++ L C + G +PN +C L+ KLCK + E A +L+ M +G + +L
Sbjct: 318 KAFRLACHLGELGMVPNLFACNALIDKLCKDRRFRE-AERLFRGMANRGLEPNEVTYAIL 376
Query: 192 FDLLCDMGKLVEAEKSFLEMIEKG 215
LC G + +A F M EKG
Sbjct: 377 IHSLCKRGMMDDALCMFDRMREKG 400
>gi|115449873|ref|NP_001048572.1| Os02g0824000 [Oryza sativa Japonica Group]
gi|113538103|dbj|BAF10486.1| Os02g0824000 [Oryza sativa Japonica Group]
Length = 1013
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 130/266 (48%), Gaps = 4/266 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR MG+KPD +YN +I +C+ + KA K++ +M+ I P++I+Y +++ GL G
Sbjct: 580 MRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGA 639
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA+ +L EM G P + + ++ ++RL + + M+ GL + T YN
Sbjct: 640 VEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNT 699
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+V + R + + M+G+G P+T + L+ + ++ A + M+ +
Sbjct: 700 LLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQN 759
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI-KALMELANKQEAL 239
I + L L +G++ EA +EM + G +P+ +++ + + +NK EA+
Sbjct: 760 ISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAM 819
Query: 240 QNLSNKMALFGPSMIPKREEYLAEMS 265
+ + G +PK Y A +S
Sbjct: 820 RLYCE---MVGKGFVPKVSTYNALIS 842
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 104/222 (46%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ D V+Y LID K + A+K +++ D ++ PD + Y I L ++G+ +A
Sbjct: 514 GLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEA 573
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ L EM+ G PD + YN I ++C A L+ EM + PN TYN
Sbjct: 574 KSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAG 633
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + + + L M+ G P++ + +++ C + ++++ L + M+ G +
Sbjct: 634 LFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHAD 693
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
I V + L +LC G +A EM+ G P ++F +
Sbjct: 694 ITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNAL 735
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 103/236 (43%), Gaps = 3/236 (1%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
D++ +N LI YC+ A + ++M + + DV+ Y +++ G GQ D AR VL
Sbjct: 168 DVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVL 227
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
MKE G P+ A Y I YC K + +A L + MV G+ + T +
Sbjct: 228 DMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRD 287
Query: 129 NDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
++ L+ M G PN + C + L K E+ L L +MV +G ++
Sbjct: 288 GRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKEL-LSLLGEMVSRGVVMDLVT 346
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEALQNL 242
L D L GK E + + + P+ V++ I AL + N EA Q L
Sbjct: 347 YTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVL 402
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 111/253 (43%), Gaps = 1/253 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P +++ ++ + R+++ I E M + + D+ Y +++ L G
Sbjct: 650 MVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGM 709
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA VL+EM G PD +NA I +C + L +A +M+ + +SPN T+N
Sbjct: 710 TRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNT 769
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + M +G PN + L +Q A++L+ +MV KG
Sbjct: 770 LLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKG 829
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEAL 239
F + + L G + +A++ F +M ++G P+ ++ + +LA +Q++
Sbjct: 830 FVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWYDLAREQKSQ 889
Query: 240 QNLSNKMALFGPS 252
++ F S
Sbjct: 890 NTYFTEIYCFSAS 902
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 102/233 (43%), Gaps = 6/233 (2%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISP-DVISYTSIIGGLGLVGQPDK 63
GV D V+ N L+ C++ QV+ A + + R I DVI + ++I G VG
Sbjct: 130 GVPFDGVTVNTLLAGLCRNGQVDAAAALAD--RGGGIHALDVIGWNTLIAGYCRVGDTPA 187
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
A V M G D YN + +C A ++ A G++D M E G+ PN TY F
Sbjct: 188 ALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIV 247
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
+ + + +++LY M+ G L + + LV R + A L+ +M + G
Sbjct: 248 YYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAP 307
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQ 236
+ L D L G+ E EM+ +G V++ ALM+ KQ
Sbjct: 308 NHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTY---TALMDWLGKQ 357
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 101/231 (43%), Gaps = 10/231 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ D+V YN L+ +C+ QV+ A +++ M++ + P+V +YT I
Sbjct: 195 MTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKG 254
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A D+ + M G D +A + C R +A L EM + G +PN TY
Sbjct: 255 VEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCT 314
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVE-----IALQLWND 175
+ + +L M+ G + + + L+ +Q K + + L ++
Sbjct: 315 LIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDN 374
Query: 176 MVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ G + VL D LC + EAE+ LEM EK P+ V+F +
Sbjct: 375 LSPNG-----VTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSV 420
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 131/323 (40%), Gaps = 53/323 (16%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV D+V+Y L+D K + ++ + +++SP+ ++YT +I L
Sbjct: 335 MVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHN 394
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A VL EM+E P+ +++ I + L A+ M E+G++PN TY
Sbjct: 395 VDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGT 454
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F+ ++ +Y M+ G N LV ++ K+E A+ L+ D G
Sbjct: 455 LIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSG 514
Query: 181 --------------------------FGSYIL---------VSDVLFDLLCDMGKLVEAE 205
FG ++ V +V + LC +GK EA+
Sbjct: 515 LSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAK 574
Query: 206 KSFLEMIEKGHKPSQVSFRRI-----------KAL-----MELANKQEALQNLSNKMA-L 248
EM G KP Q ++ + KAL M++++ + L + +A L
Sbjct: 575 SFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGL 634
Query: 249 FGPSMIPKREEYLAEMSASDSFS 271
FG + K + L EM S FS
Sbjct: 635 FGTGAVEKAKYLLNEM-VSAGFS 656
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 106/227 (46%), Gaps = 2/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++G P+ V+Y LID K + ++ ++ +M + D+++YT+++ LG G+
Sbjct: 300 MDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGK 359
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+ +D L+ P+ Y I C A + +A ++ EM EK +SPN T++
Sbjct: 360 TDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSS 419
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGT-GCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
F L + Y RMM G PN + L+ + + + AL++++DM+ +
Sbjct: 420 VINGFVKRGLLDKATE-YKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCE 478
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G + D L + L GK+ EA F + G V++ +
Sbjct: 479 GVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTL 525
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 102/249 (40%), Gaps = 8/249 (3%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
+P V+YN L+ A ++ +M + D ++ +++ GL GQ D A
Sbjct: 100 RPTTVAYNILLAALSDHAH---APAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAA 156
Query: 67 VLKEMKEYGCYP-DAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+ + G + D +N I YC A + D M +GL + YN F
Sbjct: 157 LAD--RGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGF 214
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + ++ + M G PN + F+V C R + VE A L+ MV G
Sbjct: 215 CRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYC-RTKGVEEAFDLYEGMVRNGVLLD 273
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSN 244
++ L LC G+ EA F EM + G P+ V++ + + A + + L +L
Sbjct: 274 VVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLG 333
Query: 245 KMALFGPSM 253
+M G M
Sbjct: 334 EMVSRGVVM 342
>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 105/217 (48%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
+PD+ +YN LI+ +CK +++ A +++++MR +D SPD ++Y +IG L G+ D A
Sbjct: 151 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 210
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
VL ++ C P Y I + + +A L+DEM+ +GL P+ TYN R
Sbjct: 211 VLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMC 270
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+ ++ + + GC P+ S L++ Q K E +L M + ++
Sbjct: 271 KEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 330
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+L LC GK+ EA M EKG P S+
Sbjct: 331 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSY 367
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 111/266 (41%), Gaps = 2/266 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR PD V+YN +I C +++ A K+++++ ++ P VI+YT +I L G
Sbjct: 180 MRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDNCQPTVITYTILIEATMLEGG 239
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A +L EM G PD YN IR C + A ++ + KG P+ +YN+
Sbjct: 240 VDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNI 299
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
R L +M C PN + L+ R K+E A+ L M EKG
Sbjct: 300 LLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKG 359
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
D L C G+L A + MI G P V++ + A + K +
Sbjct: 360 LTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQAL 419
Query: 241 NLSNKMALFGPSMIPKREEYLAEMSA 266
+ K+ G S P Y SA
Sbjct: 420 EIFGKLGEVGCS--PNSSSYNTMFSA 443
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 115/240 (47%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P++V+Y+ LI C+D ++E+A +++ M+++ ++PD SY +I G+ D A +
Sbjct: 327 PNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEF 386
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L+ M GC PD YN + C + A + ++ E G SPN+++YN F +
Sbjct: 387 LETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWS 446
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
S D + ++ M+ G P+ + ++ R+ V+ A +L DM F ++
Sbjct: 447 SGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVT 506
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMA 247
+++ C ++ +A M+ G +P++ ++ + + A + L+N +
Sbjct: 507 YNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLV 566
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 108/224 (48%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+KPD+ +YN +I CK+ V++A++++ + + PDVISY ++ L G+
Sbjct: 250 MLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGK 309
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++ ++ +M C P+ Y+ I C ++ +A L+ M EKGL+P+A +Y+
Sbjct: 310 WEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDP 369
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPN-TQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
F L + M+ GCLP+ L LCK K + AL+++ + E
Sbjct: 370 LIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCK-NGKADQALEIFGKLGEV 428
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G + +F L G + A LEM+ G P ++++
Sbjct: 429 GCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITY 472
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 105/226 (46%), Gaps = 1/226 (0%)
Query: 21 CKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDA 80
C+ ++ ++E M + +PDVI T +I G + KA V++ ++++G PD
Sbjct: 96 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFG-QPDV 154
Query: 81 AAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCR 140
AYNA I +C R+ DA+ ++D M K SP+ TYN+ L + + +
Sbjct: 155 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQ 214
Query: 141 MMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGK 200
++ C P + L++ + V+ AL+L ++M+ +G + + + +C G
Sbjct: 215 LLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGM 274
Query: 201 LVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKM 246
+ A + + KG +P +S+ + + K E + L KM
Sbjct: 275 VDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKM 320
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 83/173 (47%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PDIV+YN ++ CK+ + ++A +I K+ + SP+ SY ++ L G +A
Sbjct: 394 GCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRA 453
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++ EM G PD YN+ I C + A L+ +M P+ TYN+
Sbjct: 454 LHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLG 513
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
F ++ + + ++ M+G GC PN + L++ A++L ND+V
Sbjct: 514 FCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLV 566
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 106/242 (43%), Gaps = 1/242 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD++ LI + R V KA +++E + ++ PDV +Y ++I G + +
Sbjct: 111 MVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEIL-EKFGQPDVFAYNALINGFCKMNR 169
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A VL M+ PD YN I + C +L A ++D+++ P TY +
Sbjct: 170 IDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDNCQPTVITYTI 229
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + L M+ G P+ + +++ ++ V+ A ++ ++ KG
Sbjct: 230 LIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKG 289
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
++ ++L L + GK E EK +M + P+ V++ + + K E
Sbjct: 290 CEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAM 349
Query: 241 NL 242
NL
Sbjct: 350 NL 351
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 59/120 (49%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E+G P+ SYN + +A ++ +M I PD I+Y S+I L G D
Sbjct: 427 EVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVD 486
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
KA ++L +M+ +P YN + +C A R+ DA ++D MV G PN TTY +
Sbjct: 487 KAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLI 546
Score = 44.3 bits (103), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 38/71 (53%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR P +V+YN ++ +CK ++E A +++ M P+ +YT +I G+G G
Sbjct: 495 MRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGY 554
Query: 61 PDKARDVLKEM 71
+A ++ ++
Sbjct: 555 RAEAMELANDL 565
>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
EFFECT EMBRYO ARREST 40; Flags: Precursor
gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 754
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 113/226 (50%), Gaps = 3/226 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G +PD +YN LID C ++++A ++++M + VI+Y ++I G +
Sbjct: 426 MRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANK 485
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++ EM+ +G ++ YN I C ++R+ DA+ LMD+M+ +G P+ TYN
Sbjct: 486 TREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNS 545
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
F D++ + ++ M GC P+ + L+ LCK +VE+A +L + K
Sbjct: 546 LLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCK-AGRVEVASKLLRSIQMK 604
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQ-VSFR 224
G + + L K EA F EM+E+ P VS+R
Sbjct: 605 GINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYR 650
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 106/222 (47%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PD ++N L++ CK V+ A +I++ M E PDV +Y S+I GL +G+ +A
Sbjct: 290 GFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEA 349
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+VL +M C P+ YN I C ++ +A+ L + KG+ P+ T+N +
Sbjct: 350 VEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQG 409
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + R + L+ M GC P+ + L+ + K++ AL + M G
Sbjct: 410 LCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARS 469
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ + L D C K EAE+ F EM G + V++ +
Sbjct: 470 VITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTL 511
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 113/226 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G PD+ +YN +I CK +V++A +++++M D SP+ ++Y ++I L Q
Sbjct: 321 MLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQ 380
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A ++ + + G PD +N+ I+ C+ + R A L +EM KG P+ TYN+
Sbjct: 381 VEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNM 440
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
L + N+ +M +GC + + L+ + K A +++++M G
Sbjct: 441 LIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHG 500
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + L D LC ++ +A + +MI +G KP + ++ +
Sbjct: 501 VSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSL 546
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 120/254 (47%), Gaps = 3/254 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDED-ISPDVISYTSIIGGLGLVG 59
M E G VS N ++ +CK+ +VE A +++M ++D PD ++ +++ GL G
Sbjct: 250 MVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAG 309
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
A +++ M + G PD YN+ I C +++A ++D+M+ + SPN TYN
Sbjct: 310 HVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYN 369
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVE 178
N + + L + G LP+ + L++ LC + +A++L+ +M
Sbjct: 370 TLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNH-RVAMELFEEMRS 428
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEA 238
KG ++L D LC GKL EA +M G S +++ + ANK
Sbjct: 429 KGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTRE 488
Query: 239 LQNLSNKMALFGPS 252
+ + ++M + G S
Sbjct: 489 AEEIFDEMEVHGVS 502
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 96/211 (45%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ PD+ ++N LI C R A ++ E+MR + PD +Y +I L G+ D+A
Sbjct: 395 GILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEA 454
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++LK+M+ GC YN I +C A + R+A + DEM G+S N+ TYN
Sbjct: 455 LNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDG 514
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
S + + L +M+ G P+ + L+ R ++ A + M G
Sbjct: 515 LCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPD 574
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
I+ L LC G++ A K + KG
Sbjct: 575 IVTYGTLISGLCKAGRVEVASKLLRSIQMKG 605
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 120/283 (42%), Gaps = 38/283 (13%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+KPD+ ++N LI C+ Q+ A ++E M + PD ++T+++ G G D A
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA 243
Query: 65 RDVLKEMKEYGC------------------------------------YPDAAAYNAAIR 88
+ ++M E+GC +PD +N +
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN 303
Query: 89 NYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLP 148
C A ++ A +MD M+++G P+ TYN +++ + + +M+ C P
Sbjct: 304 GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSP 363
Query: 149 NTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSF 208
NT + L+ ++ +VE A +L + KG + + L LC A + F
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELF 423
Query: 209 LEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLSNKMALFG 250
EM KG +P + ++ I +L EAL N+ +M L G
Sbjct: 424 EEMRSKGCEPDEFTYNMLIDSLCSKGKLDEAL-NMLKQMELSG 465
Score = 44.7 bits (104), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 66/151 (43%), Gaps = 6/151 (3%)
Query: 40 DISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDA 99
+ SP+ Y I+ LG G D + +L++MK C + + I +Y + +
Sbjct: 78 NFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEI 137
Query: 100 SGLMDEMVEK-GLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK 158
++D M+++ GL P+ YN + N L+ + +M G P+ + L+K
Sbjct: 138 LSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIK 197
Query: 159 LCKRQEKVEIALQLWNDMVEKGFGSYILVSD 189
R ++ A+ + DM SY LV D
Sbjct: 198 ALCRAHQLRPAILMLEDM-----PSYGLVPD 223
>gi|357150350|ref|XP_003575429.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g16890, mitochondrial-like [Brachypodium distachyon]
Length = 684
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 107/211 (50%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ + SYN +ID + K V+KA +I+++MR++ + P+++++ ++I G +G A
Sbjct: 416 GLLSGVTSYNMVIDCFVKAGAVDKAAEIIKEMREKGVLPNLVTFNTLISGYSKLGNVHNA 475
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ VLK + E+G PD + + I C +L DA +EM E G+ PNA TYN+
Sbjct: 476 KAVLKMLMEHGLIPDIITFTSLINGLCHTHQLDDAFDCFNEMAEWGVRPNAHTYNVLMHA 535
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + + +L +M G P+ S + R +KV+ A ++N M+ G
Sbjct: 536 LCSAGHVNKAIDLLNKMKKDGITPDAYSFNAPILSFCRMKKVDKARNIFNAMLRLGVVPD 595
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
+ L LCD ++ EA++ L M G
Sbjct: 596 NYTYNSLIKALCDERRIDEAKEILLLMESSG 626
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 93/172 (54%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MRE GV P++V++N LI Y K V A +++ + + + PD+I++TS+I GL Q
Sbjct: 447 MREKGVLPNLVTFNTLISGYSKLGNVHNAKAVLKMLMEHGLIPDIITFTSLINGLCHTHQ 506
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A D EM E+G P+A YN + C A + A L+++M + G++P+A ++N
Sbjct: 507 LDDAFDCFNEMAEWGVRPNAHTYNVLMHALCSAGHVNKAIDLLNKMKKDGITPDAYSFNA 566
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQL 172
F + + N++ M+ G +P+ + L+K + +++ A ++
Sbjct: 567 PILSFCRMKKVDKARNIFNAMLRLGVVPDNYTYNSLIKALCDERRIDEAKEI 618
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 89/195 (45%), Gaps = 4/195 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G++P YN LI + V+ AY ++M + PD +Y +++ G+ G
Sbjct: 167 MPRLGLRPSTAVYNALIVASVRAGAVDTAYLRFQQMPADGCQPDCFTYNTLVHGVCQRGI 226
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A ++++M+ G P+ Y + +C A R DA + D M EKG+SPN +Y
Sbjct: 227 IDEALRLVRQMEGAGIRPNVFTYTMLVDGFCNAGRPEDAVHVFDTMKEKGVSPNEASYRT 286
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ + +G P+ + ++ + E + +++ M +G
Sbjct: 287 LVHGAFRCLGRHKAYVMLTEWLGREPPPHHSAWQCMLYCLSKNEMAKEVVEVTKKMNSRG 346
Query: 181 FGSYILVSDVLFDLL 195
+ L+ + +F ++
Sbjct: 347 Y----LLDNAIFGIV 357
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 64/124 (51%), Gaps = 2/124 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E GV+P+ +YN L+ C V KA ++ KM+ + I+PD S+ + I + +
Sbjct: 517 MAEWGVRPNAHTYNVLMHALCSAGHVNKAIDLLNKMKKDGITPDAYSFNAPILSFCRMKK 576
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKAR++ M G PD YN+ I+ C +R+ +A ++ M G S ATT++
Sbjct: 577 VDKARNIFNAMLRLGVVPDNYTYNSLIKALCDERRIDEAKEILLLMESSGSS--ATTHHT 634
Query: 121 FFRV 124
+
Sbjct: 635 HLPI 638
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 96/228 (42%), Gaps = 5/228 (2%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G P Y +I + KA +++M + + V SY +I G DKA
Sbjct: 381 GGNPGFDVYIMVIKSLLGCKSSSKANHYLKRMVLDGLLSGVTSYNMVIDCFVKAGAVDKA 440
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+++KEM+E G P+ +N I Y + +A ++ ++E GL P+ T+
Sbjct: 441 AEIIKEMREKGVLPNLVTFNTLISGYSKLGNVHNAKAVLKMLMEHGLIPDIITFTSLING 500
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG-- 182
++ L +++ + M G PN + L+ V A+ L N M + G
Sbjct: 501 LCHTHQLDDAFDCFNEMAEWGVRPNAHTYNVLMHALCSAGHVNKAIDLLNKMKKDGITPD 560
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKAL 229
+Y + +L C M K+ +A F M+ G P ++ IKAL
Sbjct: 561 AYSFNAPILS--FCRMKKVDKARNIFNAMLRLGVVPDNYTYNSLIKAL 606
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/316 (20%), Positives = 114/316 (36%), Gaps = 70/316 (22%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGG------ 54
M G++P++ +Y L+D +C + E A + + M+++ +SP+ SY +++ G
Sbjct: 237 MEGAGIRPNVFTYTMLVDGFCNAGRPEDAVHVFDTMKEKGVSPNEASYRTLVHGAFRCLG 296
Query: 55 -----------LGLVGQPDKAR------------------DVLKEMKEYGCYPDAAAYNA 85
LG P + +V K+M G D A +
Sbjct: 297 RHKAYVMLTEWLGREPPPHHSAWQCMLYCLSKNEMAKEVVEVTKKMNSRGYLLDNAIFGI 356
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPN------------------------------- 114
+ L D GL+D+ V+KG +P
Sbjct: 357 VVSCAVKCLELSDLCGLLDDFVKKGGNPGFDVYIMVIKSLLGCKSSSKANHYLKRMVLDG 416
Query: 115 ----ATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIAL 170
T+YN+ F + + + + M G LPN + L+ + V A
Sbjct: 417 LLSGVTSYNMVIDCFVKAGAVDKAAEIIKEMREKGVLPNLVTFNTLISGYSKLGNVHNAK 476
Query: 171 QLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALM 230
+ ++E G I+ L + LC +L +A F EM E G +P+ ++ + +
Sbjct: 477 AVLKMLMEHGLIPDIITFTSLINGLCHTHQLDDAFDCFNEMAEWGVRPNAHTYNVLMHAL 536
Query: 231 ELANKQEALQNLSNKM 246
A +L NKM
Sbjct: 537 CSAGHVNKAIDLLNKM 552
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 59/148 (39%), Gaps = 3/148 (2%)
Query: 29 AYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIR 88
A+++ +M + P Y ++I G D A ++M GC PD YN +
Sbjct: 160 AHEVFVQMPRLGLRPSTAVYNALIVASVRAGAVDTAYLRFQQMPADGCQPDCFTYNTLVH 219
Query: 89 NYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLP 148
C + +A L+ +M G+ PN TY + F + + +++ M G P
Sbjct: 220 GVCQRGIIDEALRLVRQMEGAGIRPNVFTYTMLVDGFCNAGRPEDAVHVFDTMKEKGVSP 279
Query: 149 NTQSCMFLVK---LCKRQEKVEIALQLW 173
N S LV C + K + L W
Sbjct: 280 NEASYRTLVHGAFRCLGRHKAYVMLTEW 307
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 69/160 (43%)
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
++ E++ GC A I ++ + A + +M GL P+ YN
Sbjct: 128 LVAEVRGCGCEVSEELLRALIASWGRLGLAQYAHEVFVQMPRLGLRPSTAVYNALIVASV 187
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+ + +++ + +M GC P+ + LV ++ ++ AL+L M G +
Sbjct: 188 RAGAVDTAYLRFQQMPADGCQPDCFTYNTLVHGVCQRGIIDEALRLVRQMEGAGIRPNVF 247
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+L D C+ G+ +A F M EKG P++ S+R +
Sbjct: 248 TYTMLVDGFCNAGRPEDAVHVFDTMKEKGVSPNEASYRTL 287
>gi|302765375|ref|XP_002966108.1| hypothetical protein SELMODRAFT_85930 [Selaginella moellendorffii]
gi|300165528|gb|EFJ32135.1| hypothetical protein SELMODRAFT_85930 [Selaginella moellendorffii]
Length = 382
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 120/255 (47%), Gaps = 4/255 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G+ D V Y L+ K++++++A I+ +MRD P+V++Y S+I GL +
Sbjct: 39 MQGAGIVADTVIYTVLLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNE 98
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASG--LMDEMVEKGLSPNATTY 118
PD+A+++ + MK C P YN + +L A L++ M +G SP+ T
Sbjct: 99 PDRAQELFEHMKSVECSP-LVTYNTLLDGLFWTGKLESAMAVELLESMKARGCSPDVITS 157
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
+ + + ++W + C M+ GC+PN + L+ R +V AL L DM
Sbjct: 158 TILVDGLCKESKVAAAWEVLCEMLDAGCVPNLVTSKSLLHGLCRARRVSDALALMRDMTC 217
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQE 237
+G ++ L D LC +G++ +A + M G V++ I L + E
Sbjct: 218 RGCTPNVVTYGTLIDGLCKVGRVKDAGNLYEVMTGDGCDADVVTYSTLIDGLCKGGRVDE 277
Query: 238 ALQNLSNKMALFGPS 252
A L+ + + PS
Sbjct: 278 AHLLLARMVRMGTPS 292
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 115/251 (45%), Gaps = 7/251 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G +P++V+YN LID CK+ + ++A ++ E M+ + SP +++Y +++ GL G+
Sbjct: 74 MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSP-LVTYNTLLDGLFWTGK 132
Query: 61 PDKARDV--LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
+ A V L+ MK GC PD + C ++ A ++ EM++ G PN T
Sbjct: 133 LESAMAVELLESMKARGCSPDVITSTILVDGLCKESKVAAAWEVLCEMLDAGCVPNLVTS 192
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
+ + + L M GC PN + L+ + +V+ A L+ M
Sbjct: 193 KSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDAGNLYEVMTG 252
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEA 238
G + ++ L D LC G++ EA M+ G S +++ L K
Sbjct: 253 DGCDADVVTYSTLIDGLCKGGRVDEAHLLLARMVRMGTPSSTLTYN----LQHFEGKMVK 308
Query: 239 LQNLSNKMALF 249
+ +L MA+
Sbjct: 309 VDSLEKGMAIH 319
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 96/213 (45%), Gaps = 2/213 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G PD+++ L+D CK+ +V A++++ +M D P++++ S++ GL +
Sbjct: 145 MKARGCSPDVITSTILVDGLCKESKVAAAWEVLCEMLDAGCVPNLVTSKSLLHGLCRARR 204
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A ++++M GC P+ Y I C R++DA L + M G + TY+
Sbjct: 205 VSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDAGNLYEVMTGDGCDADVVTYST 264
Query: 121 FFRVFYWSNDLRSSWNLYCRM--MGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
+ + L RM MGT T + + + +E + + E
Sbjct: 265 LIDGLCKGGRVDEAHLLLARMVRMGTPSSTLTYNLQHFEGKMVKVDSLEKGMAIHIQAAE 324
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEM 211
KG+ +S+ L D+ G +VEAE+ F M
Sbjct: 325 KGYKRDDFLSNTLVDMYAKCGSMVEAERVFRSM 357
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 92/226 (40%), Gaps = 34/226 (15%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR + P++ + LID CK ++ + M+ I D + YT ++ GL +
Sbjct: 4 MRSNNMVPNMFLCSILIDGLCKAKRSIDVLRCFRTMQGAGIVADTVIYTVLLSGLWKEKR 63
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A +L EM+++GC P+ YN+ I C A L + M SP TYN
Sbjct: 64 LDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSP-LVTYNT 122
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+W+ L S+ +A++L M +G
Sbjct: 123 LLDGLFWTGKLESA---------------------------------MAVELLESMKARG 149
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ S +L D LC K+ A + EM++ G P+ V+ + +
Sbjct: 150 CSPDVITSTILVDGLCKESKVAAAWEVLCEMLDAGCVPNLVTSKSL 195
>gi|48716316|dbj|BAD22929.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|48717088|dbj|BAD22861.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
Length = 933
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 130/266 (48%), Gaps = 4/266 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR MG+KPD +YN +I +C+ + KA K++ +M+ I P++I+Y +++ GL G
Sbjct: 580 MRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGA 639
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA+ +L EM G P + + ++ ++RL + + M+ GL + T YN
Sbjct: 640 VEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNT 699
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+V + R + + M+G+G P+T + L+ + ++ A + M+ +
Sbjct: 700 LLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQN 759
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI-KALMELANKQEAL 239
I + L L +G++ EA +EM + G +P+ +++ + + +NK EA+
Sbjct: 760 ISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAM 819
Query: 240 QNLSNKMALFGPSMIPKREEYLAEMS 265
+ + G +PK Y A +S
Sbjct: 820 RLYCE---MVGKGFVPKVSTYNALIS 842
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 104/222 (46%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ D V+Y LID K + A+K +++ D ++ PD + Y I L ++G+ +A
Sbjct: 514 GLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEA 573
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ L EM+ G PD + YN I ++C A L+ EM + PN TYN
Sbjct: 574 KSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAG 633
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + + + L M+ G P++ + +++ C + ++++ L + M+ G +
Sbjct: 634 LFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHAD 693
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
I V + L +LC G +A EM+ G P ++F +
Sbjct: 694 ITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNAL 735
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 103/236 (43%), Gaps = 3/236 (1%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
D++ +N LI YC+ A + ++M + + DV+ Y +++ G GQ D AR VL
Sbjct: 168 DVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVL 227
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
MKE G P+ A Y I YC K + +A L + MV G+ + T +
Sbjct: 228 DMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRD 287
Query: 129 NDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
++ L+ M G PN + C + L K E+ L L +MV +G ++
Sbjct: 288 GRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKEL-LSLLGEMVSRGVVMDLVT 346
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEALQNL 242
L D L GK E + + + P+ V++ I AL + N EA Q L
Sbjct: 347 YTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVL 402
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 99/226 (43%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ DI YN L+ V C KA ++E+M I+PD I++ ++I G
Sbjct: 685 MMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSH 744
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A +M P+ A +N + R+ +A ++ EM + GL PN TY++
Sbjct: 745 LDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDI 804
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++ + LYC M+G G +P + L+ + + A +L+ DM ++G
Sbjct: 805 LATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRG 864
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
D+L + E +K +M EKG PS+ + I
Sbjct: 865 VHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFI 910
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 102/233 (43%), Gaps = 6/233 (2%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISP-DVISYTSIIGGLGLVGQPDK 63
GV D V+ N L+ C++ QV+ A + + R I DVI + ++I G VG
Sbjct: 130 GVPFDGVTVNTLLAGLCRNGQVDAAAALAD--RGGGIHALDVIGWNTLIAGYCRVGDTPA 187
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
A V M G D YN + +C A ++ A G++D M E G+ PN TY F
Sbjct: 188 ALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIV 247
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
+ + + +++LY M+ G L + + LV R + A L+ +M + G
Sbjct: 248 YYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAP 307
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQ 236
+ L D L G+ E EM+ +G V++ ALM+ KQ
Sbjct: 308 NHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTY---TALMDWLGKQ 357
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 99/223 (44%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P +++ ++ + R+++ I E M + + D+ Y +++ L G
Sbjct: 650 MVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGM 709
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA VL+EM G PD +NA I +C + L +A +M+ + +SPN T+N
Sbjct: 710 TRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNT 769
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + M +G PN + L +Q A++L+ +MV KG
Sbjct: 770 LLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKG 829
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
F + + L G + +A++ F +M ++G P+ ++
Sbjct: 830 FVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTY 872
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 96/226 (42%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ D+V YN L+ +C+ QV+ A +++ M++ + P+V +YT I
Sbjct: 195 MTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKG 254
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A D+ + M G D +A + C R +A L EM + G +PN TY
Sbjct: 255 VEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCT 314
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + +L M+ G + + + L+ +Q K + +
Sbjct: 315 LIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDN 374
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ VL D LC + EAE+ LEM EK P+ V+F +
Sbjct: 375 LSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSV 420
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 131/323 (40%), Gaps = 53/323 (16%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV D+V+Y L+D K + ++ + +++SP+ ++YT +I L
Sbjct: 335 MVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHN 394
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A VL EM+E P+ +++ I + L A+ M E+G++PN TY
Sbjct: 395 VDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGT 454
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F+ ++ +Y M+ G N LV ++ K+E A+ L+ D G
Sbjct: 455 LIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSG 514
Query: 181 --------------------------FGSYIL---------VSDVLFDLLCDMGKLVEAE 205
FG ++ V +V + LC +GK EA+
Sbjct: 515 LSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAK 574
Query: 206 KSFLEMIEKGHKPSQVSFRRI-----------KAL-----MELANKQEALQNLSNKMA-L 248
EM G KP Q ++ + KAL M++++ + L + +A L
Sbjct: 575 SFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGL 634
Query: 249 FGPSMIPKREEYLAEMSASDSFS 271
FG + K + L EM S FS
Sbjct: 635 FGTGAVEKAKYLLNEM-VSAGFS 656
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 106/227 (46%), Gaps = 2/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++G P+ V+Y LID K + ++ ++ +M + D+++YT+++ LG G+
Sbjct: 300 MDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGK 359
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+ +D L+ P+ Y I C A + +A ++ EM EK +SPN T++
Sbjct: 360 TDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSS 419
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGT-GCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
F L + Y RMM G PN + L+ + + + AL++++DM+ +
Sbjct: 420 VINGFVKRGLLDKATE-YKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCE 478
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G + D L + L GK+ EA F + G V++ +
Sbjct: 479 GVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTL 525
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 102/249 (40%), Gaps = 8/249 (3%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
+P V+YN L+ A ++ +M + D ++ +++ GL GQ D A
Sbjct: 100 RPTTVAYNILLAALSDHAH---APAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAA 156
Query: 67 VLKEMKEYGCYP-DAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+ + G + D +N I YC A + D M +GL + YN F
Sbjct: 157 LAD--RGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGF 214
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + ++ + M G PN + F+V C R + VE A L+ MV G
Sbjct: 215 CRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYC-RTKGVEEAFDLYEGMVRNGVLLD 273
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSN 244
++ L LC G+ EA F EM + G P+ V++ + + A + + L +L
Sbjct: 274 VVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLG 333
Query: 245 KMALFGPSM 253
+M G M
Sbjct: 334 EMVSRGVVM 342
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 62/125 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G++P+ ++Y+ L + K +A ++ +M + P V +Y ++I G
Sbjct: 790 MEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGM 849
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A+++ K+M++ G +P + Y+ + + + + + +M EKG SP+ T +
Sbjct: 850 MTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSF 909
Query: 121 FFRVF 125
R F
Sbjct: 910 ICRAF 914
>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
Length = 757
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 106/218 (48%), Gaps = 4/218 (1%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P++V+Y +ID CK + V++A + + M D+ + P+ +YT +I G +G+ + +
Sbjct: 200 PNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQM 259
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L+EM +G PD Y + C R +A + D ++ KG+ PN T Y + +
Sbjct: 260 LQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYAT 319
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEI--ALQLWNDMVEKGFGSYI 185
L + M+G G P+ +F + C +K I A+ +++ M ++ I
Sbjct: 320 EGSLSEMHSFLDLMVGNGVSPDHH--IFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNI 377
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ L D LC +G++ +A F +MI++G P F
Sbjct: 378 VTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVF 415
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 105/216 (48%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
+ G++ D V +N L+ C++ +V +A ++++ M + PDVISY +++ G L G+ D
Sbjct: 440 DQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRID 499
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
+A +L + G PD YN + YC A+R+ DA L EM+ KGL+P+ TYN
Sbjct: 500 EAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTIL 559
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
+ + + LY M+ + N + ++ + V+ A ++++ + K
Sbjct: 560 HGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQ 619
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
I ++++ L G+ +A F + G P
Sbjct: 620 LDIFTANIMIGALLKGGRKEDAMDLFATISAYGLVP 655
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 107/212 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ + P+IV+Y LID CK +V+ A +M DE ++PD+ ++S++ GL V +
Sbjct: 368 MRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDK 427
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA ++ E+ + G D +N + N C R+ +A L+D M+ G+ P+ +YN
Sbjct: 428 WEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNT 487
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + L ++ G P+ + L+ + +++ A L+ +M+ KG
Sbjct: 488 LVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKG 547
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMI 212
++ + + L G+ EA++ +L MI
Sbjct: 548 LTPDVVTYNTILHGLFQTGRFSEAKELYLSMI 579
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 106/226 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV+P+ +Y CLI Y + ++ +++++M + PD Y ++ L G+
Sbjct: 228 MIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYIYAVLLDYLCKNGR 287
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR++ + G P+ Y + Y L + +D MV G+SP+ +N+
Sbjct: 288 CTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVGNGVSPDHHIFNI 347
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + + + +++ +M PN + L+ + +V+ A+ +N M+++G
Sbjct: 348 MFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEG 407
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
I V L LC + K +AE+ F E++++G + V F +
Sbjct: 408 MTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTL 453
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 101/226 (44%), Gaps = 7/226 (3%)
Query: 1 MREMGVK--PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDIS-PDVISYTSIIGGLGL 57
+RE +K P +Y LI +C+ +++ + + D + ++ ++ GL
Sbjct: 81 IRECSIKVAPSSFTYTILIGCFCRMGRLKHGFAAFGLILKTGWRVNDTVIFSQLLKGLCD 140
Query: 58 VGQPDKARDVL-KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKG---LSP 113
+ D+A D+L + M E+GC PD +Y+ ++ +C KR +A L+ M + G +P
Sbjct: 141 AKRVDEATDILLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTP 200
Query: 114 NATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLW 173
N TY + + + ++ M+ G PN + L+ K + +Q+
Sbjct: 201 NVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQML 260
Query: 174 NDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
+M G + VL D LC G+ EA F +I KG KP+
Sbjct: 261 QEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPN 306
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 86/177 (48%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
+G+KPD V+YN L+ YCK R+++ AY + +M + ++PDV++Y +I+ GL G+ +
Sbjct: 511 IGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSE 570
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
A+++ M + YN I C + +A + + K L + T N+
Sbjct: 571 AKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIG 630
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ +L+ + G +P+ ++ + + ++ +E +L++ M E G
Sbjct: 631 ALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENG 687
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 106/235 (45%), Gaps = 13/235 (5%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +GV+PD++SYN L+D +C ++++A K+++ + + PD ++Y +++ G +
Sbjct: 473 MLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARR 532
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A + +EM G PD YN + R +A L M+ N TYN+
Sbjct: 533 IDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNI 592
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+N + ++ ++ + + + ++ + + E A+ L+ +
Sbjct: 593 IINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDAMDLFATI---- 648
Query: 181 FGSYILVSDV-----LFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALM 230
+Y LV DV + + L G L E ++ F M E G P+ R + AL+
Sbjct: 649 -SAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGTAPNS---RMLNALV 699
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 99/226 (43%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G++PD Y L+D CK+ + +A I + + + I P+V Y ++ G G
Sbjct: 263 MSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGS 322
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ L M G PD +N Y + +A + D+M ++ LSPN TY
Sbjct: 323 LSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGA 382
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + +M+ G P+ LV +K E A +L+ +++++G
Sbjct: 383 LIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQG 442
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + L LC G+++EA++ M+ G +P +S+ +
Sbjct: 443 IRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTL 488
>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Vitis vinifera]
Length = 666
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 106/219 (48%), Gaps = 5/219 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G++P++ +YN L+ CK+ +V+ A+K++ +M + PD +SYT++I L +G+
Sbjct: 172 MKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGK 231
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR++ P YNA I C +A L+DEM+ KG+ PN +Y
Sbjct: 232 VKEARELAMSFT-----PSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTT 286
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ S + +M GC PN + L+K + AL W+ M+ +G
Sbjct: 287 IINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREG 346
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
++ + L LC L +A F +M G P+
Sbjct: 347 VVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPN 385
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 109/223 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P++V+Y C++DV C++ +AY ++E M+ E+ P+ +++ + I GL G+
Sbjct: 412 MITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGR 471
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A V +M GC+P+ YN + + +R +A GL+ +M +G+ N TYN
Sbjct: 472 VDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNT 531
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + L + L +M+ G P+ + ++ +Q KV IA+QL + +
Sbjct: 532 IIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGK 591
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ I+ L +C + EA M+ +G P+ ++
Sbjct: 592 WHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATW 634
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 109/227 (48%), Gaps = 1/227 (0%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
M P + YN LI+ CK+ E+A++++++M ++ I P+VISYT+II L G +
Sbjct: 240 MSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVEL 299
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
+ VL +M GC P+ + + I+ + + +A D M+ +G+ PN YN
Sbjct: 300 SLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMH 359
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
L + +++ +M GC PN ++ L+ + ++ A ++WN M+ G
Sbjct: 360 GLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHP 419
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKAL 229
++ + D+LC +A M + P+ V+F IK L
Sbjct: 420 NVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGL 466
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 103/222 (46%), Gaps = 1/222 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+RE GV P++V+YN L+ C R + A + +M P+V +Y+++I G G
Sbjct: 343 IRE-GVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGD 401
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A +V M +GC+P+ AY + C A L++ M + PN T+N
Sbjct: 402 LDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNT 461
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + S + + ++ +M +GC PNT + L+ + + A L DM +G
Sbjct: 462 FIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRG 521
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
++ + + C G L EA + +M+ +G KP ++
Sbjct: 522 IELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAIT 563
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 100/226 (44%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ P+++SY +I+ VE + ++ KM SP++ ++TS+I G L G
Sbjct: 272 MMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGG 331
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A D M G P+ AYNA + C + L DA + ++M G PN TY+
Sbjct: 332 SHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSA 391
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + DL + ++ M+ GC PN + +V + R A L +M +
Sbjct: 392 LIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVEN 451
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + LC G++ A K F +M G P+ ++ +
Sbjct: 452 CPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNEL 497
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 106/242 (43%), Gaps = 14/242 (5%)
Query: 11 VSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKE 70
++Y +I+ +R+++ ++++M+ E IS + S+IG G ++A
Sbjct: 77 LTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYR 136
Query: 71 MKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSND 130
M+++ P YN + R + + + M + G+ PN TYN+ + +N
Sbjct: 137 MQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNR 196
Query: 131 LRSSWNLYCRMMGTGCLPNTQSCMFLV----KLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+ + L M GC P+ S L+ KL K +E E+A+ F +
Sbjct: 197 VDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMS---------FTPSVP 247
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLSNK 245
V + L + +C EA + EM+ KG P+ +S+ I AL + N + +L L+
Sbjct: 248 VYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKM 307
Query: 246 MA 247
A
Sbjct: 308 FA 309
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 77/181 (42%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P+ +YN L+D KDR+ +A+ +V+ M I ++++Y +II G G
Sbjct: 482 MGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGM 541
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++L +M G PDA N I YC ++ A LMD + P+ Y
Sbjct: 542 LGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTS 601
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + RM+ G PN + LV+ A+Q + ++ G
Sbjct: 602 LISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFSNMGHSGAVQFLDAVLGSG 661
Query: 181 F 181
F
Sbjct: 662 F 662
>gi|294462101|gb|ADE76603.1| unknown [Picea sitchensis]
Length = 290
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 106/207 (51%)
Query: 10 IVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLK 69
++SYN ++D +CK Q+++A + ++K+ + ++ P+ SYT +I G G+ +A + +
Sbjct: 54 VMSYNAVMDGFCKAGQLQEALQYLDKLPENNLGPNATSYTILISGYITQGKLQEAEKLFR 113
Query: 70 EMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSN 129
M E GC PDA YN + Y +A L++EMV + P++ TY + F
Sbjct: 114 SMAEKGCIPDACVYNTLLDAYFKEGMFAEAEKLLEEMVTEHREPDSVTYTMLINEFTKQG 173
Query: 130 DLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSD 189
+ + ++ M+ G P+ L ++ K + A +L+ MV+ G + D
Sbjct: 174 KMEGALKIFANMIEAGLKPDVTVYNKWFGLLCKESKFDEAQKLFQRMVDGGQNPDVGTYD 233
Query: 190 VLFDLLCDMGKLVEAEKSFLEMIEKGH 216
+L + G+ EA+K F +++EKG+
Sbjct: 234 ILTEGFGQEGRAEEAKKLFRDILEKGN 260
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 94/203 (46%), Gaps = 1/203 (0%)
Query: 16 LIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYG 75
LI + K ++ KA + + E V+SY +++ G GQ +A L ++ E
Sbjct: 26 LIGGFFKAGEIYKALDVFHFI-PEKFERTVMSYNAVMDGFCKAGQLQEALQYLDKLPENN 84
Query: 76 CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSW 135
P+A +Y I Y +L++A L M EKG P+A YN ++ +
Sbjct: 85 LGPNATSYTILISGYITQGKLQEAEKLFRSMAEKGCIPDACVYNTLLDAYFKEGMFAEAE 144
Query: 136 NLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLL 195
L M+ P++ + L+ +Q K+E AL+++ +M+E G + V + F LL
Sbjct: 145 KLLEEMVTEHREPDSVTYTMLINEFTKQGKMEGALKIFANMIEAGLKPDVTVYNKWFGLL 204
Query: 196 CDMGKLVEAEKSFLEMIEKGHKP 218
C K EA+K F M++ G P
Sbjct: 205 CKESKFDEAQKLFQRMVDGGQNP 227
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 69/159 (43%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G PD YN L+D Y K+ +A K++E+M E PD ++YT +I G+
Sbjct: 115 MAEKGCIPDACVYNTLLDAYFKEGMFAEAEKLLEEMVTEHREPDSVTYTMLINEFTKQGK 174
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A + M E G PD YN C + +A L MV+ G +P+ TY++
Sbjct: 175 MEGALKIFANMIEAGLKPDVTVYNKWFGLLCKESKFDEAQKLFQRMVDGGQNPDVGTYDI 234
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKL 159
F + L+ ++ G L + KL
Sbjct: 235 LTEGFGQEGRAEEAKKLFRDILEKGNLSEELVALLAGKL 273
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 94/201 (46%), Gaps = 5/201 (2%)
Query: 48 YTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMV 107
+ ++IGG G+ KA DV + E +YNA + +C A +L++A +D++
Sbjct: 23 FCNLIGGFFKAGEIYKALDVFHFIPE-KFERTVMSYNAVMDGFCKAGQLQEALQYLDKLP 81
Query: 108 EKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMF--LVKLCKRQEK 165
E L PNAT+Y + + L+ + L+ M GC+P+ +C++ L+ ++
Sbjct: 82 ENNLGPNATSYTILISGYITQGKLQEAEKLFRSMAEKGCIPD--ACVYNTLLDAYFKEGM 139
Query: 166 VEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR 225
A +L +MV + + +L + GK+ A K F MIE G KP + +
Sbjct: 140 FAEAEKLLEEMVTEHREPDSVTYTMLINEFTKQGKMEGALKIFANMIEAGLKPDVTVYNK 199
Query: 226 IKALMELANKQEALQNLSNKM 246
L+ +K + Q L +M
Sbjct: 200 WFGLLCKESKFDEAQKLFQRM 220
>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 499
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 119/246 (48%), Gaps = 1/246 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ V YN LI + + + A K+ +M + + PD +++TS++ GLG+ G+
Sbjct: 220 MTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGR 279
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR + +E ++ GC D YN I C +KRL +A + E+ E GL P+ T+N
Sbjct: 280 ASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNA 339
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
S + ++ L M GC P+ L+ ++ +VE A QL +M G
Sbjct: 340 LMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLG 399
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ ++ + L D C G++ +A + F E+ KG + V++ I + +A + +
Sbjct: 400 YEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKGF-ANTVTYNTILNGLCMAGRVDEAY 458
Query: 241 NLSNKM 246
L N M
Sbjct: 459 KLFNGM 464
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 107/227 (47%), Gaps = 2/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G +P+I +Y +ID K V+KA+ + E+M E + + Y S+I GLG G+
Sbjct: 185 MKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGR 244
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A + +EM G PD + + + +A R +A + E + G + + YN+
Sbjct: 245 ADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNV 304
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
S L +W ++ + G +P+ + L+ LCK ++ A L DM
Sbjct: 305 LIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCK-SGRIHDAFILLGDMKRA 363
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G + V + L D L G++ EA + LEM G++P V++ +
Sbjct: 364 GCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTL 410
Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 113/231 (48%), Gaps = 3/231 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G++PD ++N L++ + K ++V+ +K+ E+M++++ SP+VI+Y+ +I + G
Sbjct: 115 MGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGG 174
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA V +MK GC P+ Y + I + + A L +EM +GL YN
Sbjct: 175 VEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNS 234
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
S ++ L+ M+ G P+ + LV + A +++ + + G
Sbjct: 235 LIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVG 294
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALME 231
+ + +VL D LC +L EA + F E+ E G P +F ALM+
Sbjct: 295 CALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTF---NALMD 342
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 89/204 (43%)
Query: 20 YCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPD 79
Y +EK+ + +++M + +Y S+I G KA V + M + G PD
Sbjct: 64 YASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPD 123
Query: 80 AAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYC 139
+N + + AKR+ L +EM + SPN TY++ + + ++
Sbjct: 124 TYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFL 183
Query: 140 RMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMG 199
M GC PN + ++ + V+ A L+ +M +G + +V + L L G
Sbjct: 184 DMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSG 243
Query: 200 KLVEAEKSFLEMIEKGHKPSQVSF 223
+ A K F EM+ KG +P V+F
Sbjct: 244 RADAAAKLFREMLSKGLQPDHVTF 267
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 86/193 (44%)
Query: 54 GLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSP 113
G G +K+ + LK M+ + C A+AYN+ I + A + A + M + GL P
Sbjct: 63 GYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRP 122
Query: 114 NATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLW 173
+ T+N+ F + + S W L+ M C PN + L+ + VE AL+++
Sbjct: 123 DTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVF 182
Query: 174 NDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELA 233
DM +G I + D L G + +A F EM +G ++V + + + +
Sbjct: 183 LDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRS 242
Query: 234 NKQEALQNLSNKM 246
+ +A L +M
Sbjct: 243 GRADAAAKLFREM 255
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 64/123 (52%), Gaps = 5/123 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G PD+ YN LID K +VE+A +++ +M+ PDV++Y ++I G+
Sbjct: 360 MKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGR 419
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDA----SGLMDEMVEKGLSPNAT 116
+ A + +E+ G + + YN + C+A R+ +A +G+ E V+ + P+
Sbjct: 420 IEDALRLFEEISAKG-FANTVTYNTILNGLCMAGRVDEAYKLFNGMKQETVDGVIDPDFV 478
Query: 117 TYN 119
TY
Sbjct: 479 TYT 481
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 39/92 (42%), Gaps = 38/92 (41%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQ----------------------------------V 26
M+ +G +PD+V+YN LID CK + V
Sbjct: 395 MQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKGFANTVTYNTILNGLCMAGRV 454
Query: 27 EKAYKIVEKMRDED----ISPDVISYTSIIGG 54
++AYK+ M+ E I PD ++YT+++ G
Sbjct: 455 DEAYKLFNGMKQETVDGVIDPDFVTYTTLLNG 486
>gi|297734042|emb|CBI15289.3| unnamed protein product [Vitis vinifera]
Length = 793
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 102/219 (46%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
R+ G K D +Y ++ + + RQ K++ +M + P+V++Y +I G
Sbjct: 380 RQTGFKHDGHTYTTMVGILGRARQFGAINKLLAEMVRDGCQPNVVTYNRLIHSYGRANYL 439
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
++A V M+E GC PD Y I + A L A + +M E LSP+ TY++
Sbjct: 440 NEAVSVFDRMQEAGCQPDRVTYCTLIDIHAKAGFLDVALHMYQKMQEAHLSPDTFTYSVI 499
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
+ L S+ L+C M+ GC+PN + ++ L + AL+L+ DM GF
Sbjct: 500 INCLGKAGHLTSAHKLFCEMVDQGCVPNLVTYNIMIALQAKARNYPTALELYRDMQNAGF 559
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQ 220
+ ++ ++L G L EAE F EM K P +
Sbjct: 560 QPDKVTYSIVMEVLGHCGHLEEAEAIFTEMKRKNWVPDE 598
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 97/219 (44%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E G +PD V+Y LID++ K ++ A + +KM++ +SPD +Y+ II LG G
Sbjct: 449 MQEAGCQPDRVTYCTLIDIHAKAGFLDVALHMYQKMQEAHLSPDTFTYSVIINCLGKAGH 508
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A + EM + GC P+ YN I A+ A L +M G P+ TY++
Sbjct: 509 LTSAHKLFCEMVDQGCVPNLVTYNIMIALQAKARNYPTALELYRDMQNAGFQPDKVTYSI 568
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
V L + ++ M +P+ LV L + VE + + + M+ G
Sbjct: 569 VMEVLGHCGHLEEAEAIFTEMKRKNWVPDEPVYGLLVDLWGKVGNVEKSWEWYQAMLNAG 628
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
+ + L + +L +A M+ G +PS
Sbjct: 629 LCPNVPTCNSLLSAFLRVHRLSDAYNLLQSMLRLGLQPS 667
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 100/205 (48%), Gaps = 5/205 (2%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G +P++V+YN LI Y + + +A + ++M++ PD ++Y ++I G D A
Sbjct: 418 GCQPNVVTYNRLIHSYGRANYLNEAVSVFDRMQEAGCQPDRVTYCTLIDIHAKAGFLDVA 477
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ ++M+E PD Y+ I A L A L EMV++G PN TYN+ +
Sbjct: 478 LHMYQKMQEAHLSPDTFTYSVIINCLGKAGHLTSAHKLFCEMVDQGCVPNLVTYNIMIAL 537
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + ++ LY M G P+ + ++++ +E A ++ +M K +
Sbjct: 538 QAKARNYPTALELYRDMQNAGFQPDKVTYSIVMEVLGHCGHLEEAEAIFTEMKRKNW--- 594
Query: 185 ILVSDVLFDLLCDM-GKLVEAEKSF 208
+ + ++ LL D+ GK+ EKS+
Sbjct: 595 -VPDEPVYGLLVDLWGKVGNVEKSW 618
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 71/160 (44%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G P++V+YN +I + K R A ++ M++ PD ++Y+ ++ LG G
Sbjct: 519 MVDQGCVPNLVTYNIMIALQAKARNYPTALELYRDMQNAGFQPDKVTYSIVMEVLGHCGH 578
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A + EMK PD Y + + + + M+ GL PN T N
Sbjct: 579 LEEAEAIFTEMKRKNWVPDEPVYGLLVDLWGKVGNVEKSWEWYQAMLNAGLCPNVPTCNS 638
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLC 160
F + L ++NL M+ G P+ Q+ L+ C
Sbjct: 639 LLSAFLRVHRLSDAYNLLQSMLRLGLQPSLQTYTLLLSCC 678
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 78/161 (48%), Gaps = 8/161 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G +PD V+Y+ +++V +E+A I +M+ ++ PD Y ++ G VG
Sbjct: 554 MQNAGFQPDKVTYSIVMEVLGHCGHLEEAEAIFTEMKRKNWVPDEPVYGLLVDLWGKVGN 613
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+K+ + + M G P+ N+ + + RL DA L+ M+ GL P+ TY L
Sbjct: 614 VEKSWEWYQAMLNAGLCPNVPTCNSLLSAFLRVHRLSDAYNLLQSMLRLGLQPSLQTYTL 673
Query: 121 FFRVFYWSNDLRSSWNL-YC-RMMGTGCLPNTQSCMFLVKL 159
+ RSS+++ +C +M P + MFL+ +
Sbjct: 674 LLSC---CTEARSSFDMGFCGELMAVTGHP---AHMFLLSM 708
>gi|168038876|ref|XP_001771925.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676707|gb|EDQ63186.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 831
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 109/223 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+KPD ++YN L++ +CK+ Q+ +A +++ +M D P + +YT II G +G
Sbjct: 431 MSNAGIKPDGITYNILMNAFCKNGQMNRALELLARMESGDCPPTLRTYTIIIDGFMKIGD 490
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A + +++MK G P AA YN + A ++ A+ ++DEMV G+ PN +Y
Sbjct: 491 LRMAFETVRDMKMAGFRPSAATYNVIMHGLAQAGQMDRAASIIDEMVVAGVHPNERSYTT 550
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ D+ ++ + R+ G P+ + L+K C + +++ L + +M G
Sbjct: 551 LIEGYACIGDMGLAFKYFNRIKEVGLKPDVIAYASLLKACCKAGRMQSTLAITAEMAAAG 610
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ ++L D G + EA +M +G P S+
Sbjct: 611 VPMNNYIYNILLDGWAQRGDMWEASDIMQKMRHEGLTPDIHSY 653
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 100/226 (44%), Gaps = 3/226 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G++P++ SY LI Y + + A VE+M E +SP+ +Y+ II G G +G
Sbjct: 218 MRAAGIEPNVHSYTNLIHAYAVAQDLRGAIACVEEMEAEGVSPNAATYSVIISGYGRLGD 277
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A + + + YN I YC A + A +M M E+GL YN+
Sbjct: 278 VEAAERWFQRALSENWHHNDVIYNNIIHAYCKAGNMERAEAIMTAMEEQGLEATLGLYNM 337
Query: 121 FFRVFYWSNDLRSSWNLYCRMMG---TGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
+ + N++ R+ TG P S L+ L + K++ ALQ+ N+M
Sbjct: 338 LMDGYVHCRAVDKCLNVFRRLKARTETGLSPTVVSYGCLINLYSKLGKMDKALQISNEME 397
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++G ++ D +G A F +M G KP +++
Sbjct: 398 DQGIKHNRKTYSMIIDGYVQLGDTANAFSVFEDMSNAGIKPDGITY 443
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 100/226 (44%), Gaps = 3/226 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMR---DEDISPDVISYTSIIGGLGL 57
M E G++ + YN L+D Y R V+K + +++ + +SP V+SY +I
Sbjct: 323 MEEQGLEATLGLYNMLMDGYVHCRAVDKCLNVFRRLKARTETGLSPTVVSYGCLINLYSK 382
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
+G+ DKA + EM++ G + Y+ I Y +A + ++M G+ P+ T
Sbjct: 383 LGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQLGDTANAFSVFEDMSNAGIKPDGIT 442
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
YN+ F + + + L RM C P ++ ++ + + +A + DM
Sbjct: 443 YNILMNAFCKNGQMNRALELLARMESGDCPPTLRTYTIIIDGFMKIGDLRMAFETVRDMK 502
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
GF +V+ L G++ A EM+ G P++ S+
Sbjct: 503 MAGFRPSAATYNVIMHGLAQAGQMDRAASIIDEMVVAGVHPNERSY 548
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 111/251 (44%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E G+ P +VSY CLI++Y K +++KA +I +M D+ I + +Y+ II G +G
Sbjct: 363 ETGLSPTVVSYGCLINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQLGDTA 422
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
A V ++M G PD YN + +C ++ A L+ M P TY +
Sbjct: 423 NAFSVFEDMSNAGIKPDGITYNILMNAFCKNGQMNRALELLARMESGDCPPTLRTYTIII 482
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
F DLR ++ M G P+ + ++ + +++ A + ++MV G
Sbjct: 483 DGFMKIGDLRMAFETVRDMKMAGFRPSAATYNVIMHGLAQAGQMDRAASIIDEMVVAGVH 542
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNL 242
L + +G + A K F + E G KP +++ + A + ++ +
Sbjct: 543 PNERSYTTLIEGYACIGDMGLAFKYFNRIKEVGLKPDVIAYASLLKACCKAGRMQSTLAI 602
Query: 243 SNKMALFGPSM 253
+ +MA G M
Sbjct: 603 TAEMAAAGVPM 613
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 81/180 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G +P +YN ++ + Q+++A I+++M + P+ SYT++I G +G
Sbjct: 501 MKMAGFRPSAATYNVIMHGLAQAGQMDRAASIIDEMVVAGVHPNERSYTTLIEGYACIGD 560
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +KE G PD AY + ++ C A R++ + EM G+ N YN+
Sbjct: 561 MGLAFKYFNRIKEVGLKPDVIAYASLLKACCKAGRMQSTLAITAEMAAAGVPMNNYIYNI 620
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ D+ + ++ +M G P+ S + C + + A + M ++G
Sbjct: 621 LLDGWAQRGDMWEASDIMQKMRHEGLTPDIHSYTSFINACCKAGDMLKATETIEQMKQQG 680
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 89/187 (47%), Gaps = 6/187 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
++E+G+KPD+++Y L+ CK +++ I +M + + Y ++ G G
Sbjct: 571 IKEVGLKPDVIAYASLLKACCKAGRMQSTLAITAEMAAAGVPMNNYIYNILLDGWAQRGD 630
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A D++++M+ G PD +Y + I C A + A+ +++M ++G+ PN Y
Sbjct: 631 MWEASDIMQKMRHEGLTPDIHSYTSFINACCKAGDMLKATETIEQMKQQGVQPNLQAYTT 690
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQ--SCMFLVKLCK----RQEKVEIALQLWN 174
+ ++ + Y M G +P+ C+ L + R+ + L++ +
Sbjct: 691 LIHGWASASYPEKALICYDEMKSAGMIPDKPLYHCIMTSLLSRAAVARETVFDGVLRVTS 750
Query: 175 DMVEKGF 181
+MV++G
Sbjct: 751 EMVDQGI 757
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 106/239 (44%), Gaps = 11/239 (4%)
Query: 12 SYNCLIDVYCKD-RQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKE 70
+ L++ + KD R+V A+K ++K + D +T ++ G G AR +
Sbjct: 165 GFRNLVEDHPKDARKVVDAFKRIKKPKQRD-------HTLLVNYYGKRGDKHSARAAFES 217
Query: 71 MKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSND 130
M+ G P+ +Y I Y +A+ LR A ++EM +G+SPNA TY++ + D
Sbjct: 218 MRAAGIEPNVHSYTNLIHAYAVAQDLRGAIACVEEMEAEGVSPNAATYSVIISGYGRLGD 277
Query: 131 LRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDV 190
+ ++ + R + N ++ + +E A + M E+G + + + ++
Sbjct: 278 VEAAERWFQRALSENWHHNDVIYNNIIHAYCKAGNMERAEAIMTAMEEQGLEATLGLYNM 337
Query: 191 LFD--LLC-DMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKM 246
L D + C + K + + E G P+ VS+ + L K + +SN+M
Sbjct: 338 LMDGYVHCRAVDKCLNVFRRLKARTETGLSPTVVSYGCLINLYSKLGKMDKALQISNEM 396
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 77/176 (43%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV P+ SY LI+ Y + A+K ++++ + PDVI+Y S++ G+
Sbjct: 540 GVHPNERSYTTLIEGYACIGDMGLAFKYFNRIKEVGLKPDVIAYASLLKACCKAGRMQST 599
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ EM G + YN + + + +AS +M +M +GL+P+ +Y F
Sbjct: 600 LAITAEMAAAGVPMNNYIYNILLDGWAQRGDMWEASDIMQKMRHEGLTPDIHSYTSFINA 659
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ D+ + +M G PN Q+ L+ E AL +++M G
Sbjct: 660 CCKAGDMLKATETIEQMKQQGVQPNLQAYTTLIHGWASASYPEKALICYDEMKSAG 715
>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 644
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 117/248 (47%), Gaps = 1/248 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV+PD+V+Y LID +C ++++A K+ + M + +P+V SY ++I G + +
Sbjct: 310 MFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIER 369
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA + +EM P+ YN I C RL+DA L EMV G P+ TY +
Sbjct: 370 MDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRI 429
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L + L + G+ P+ Q ++ R ++E A L++++ KG
Sbjct: 430 LLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKG 489
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI-KALMELANKQEAL 239
+ +++ LC G L EA K F+EM E ++ I + + A+
Sbjct: 490 LKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAI 549
Query: 240 QNLSNKMA 247
Q L +A
Sbjct: 550 QLLEEMLA 557
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 105/219 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + + P+ +S ++D CK+ V +A+ +V+ M + PDV++YT++I G L +
Sbjct: 275 MVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSE 334
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A V M GC P+ +YN I YC +R+ A L +EM + L PN TYN
Sbjct: 335 MDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNT 394
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
L+ + L+ M+ G +P+ + L+ + ++ A+ L +
Sbjct: 395 LIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSN 454
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
I + ++ D +C G+L +A F + KG KP+
Sbjct: 455 LDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPN 493
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 102/224 (45%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
++G +PD S+ LI C + Q+ +A + +KM E PDV+ Y ++I GL G
Sbjct: 137 KLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTS 196
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
A +L+ M++ C PD Y I + C ++ A L EM+ KG+SPN T N
Sbjct: 197 AAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLV 256
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
+ + L M+ + +PN S +V ++ V A + + M + G
Sbjct: 257 YALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVE 316
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ L D C ++ EA K F M+ KG P+ S+ +
Sbjct: 317 PDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTL 360
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 108/224 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + +PD+V Y LI CKDRQ +A+ + +M + ISP++++ S++ L +G+
Sbjct: 205 MEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGE 264
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+L EM + P+A + + C + A ++D M + G+ P+ TY
Sbjct: 265 WKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTA 324
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+++ + ++ M+ GC PN S L+ + E+++ A+ L+ +M +
Sbjct: 325 LIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQK 384
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
+ + L LC +G+L +A F EM+ G P V++R
Sbjct: 385 LIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYR 428
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 94/227 (41%), Gaps = 2/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ ++ + N LI+ +C +V A+ ++ K+ PD S+T++I GL L GQ
Sbjct: 100 MDSFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQ 159
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + +M G PD Y I C A L+ M + P+ Y
Sbjct: 160 IGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGT 219
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEK 179
++NL+ M+ G PN +C LV LC E + L N+MV+
Sbjct: 220 LIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVN-TLLNEMVDS 278
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + D LC G + +A M + G +P V++ +
Sbjct: 279 KIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTAL 325
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 98/219 (44%), Gaps = 9/219 (4%)
Query: 2 REM---GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLV 58
REM G PD+V+Y L+D CK+ ++KA +++ + ++ PD+ YT +I G+
Sbjct: 413 REMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRA 472
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
G+ + ARD+ + G P+ YN C L +A+ L EM E S + TY
Sbjct: 473 GELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTY 532
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
N + F +N+ + L M+ G + + LV + + DM
Sbjct: 533 NTITQGFLRNNETSRAIQLLEEMLARGFSCDVSTTTLLVGMLSDDGLDQSEAHKLEDMFP 592
Query: 179 KGFGSYILVSDVLF---DLLCDMGKLVEAEKSFLEMIEK 214
I V D +F D + +GK++ +LE +E+
Sbjct: 593 H---LRIQVKDTVFCKEDDINALGKVISDLNDWLEELEE 628
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 99/227 (43%), Gaps = 2/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M M P IV + ++ K ++ + KM I +V + +I + +
Sbjct: 65 MLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNVLINSFCHLNR 124
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A VL ++ + GC PD A++ I+ C+ ++ +A L D+M+ +G P+ Y
Sbjct: 125 VNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYAT 184
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+ ++ L M C P+ L+ LCK +++ + A L+++M+ K
Sbjct: 185 LINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQ-AFNLFSEMITK 243
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G I+ + L LC++G+ EM++ P+ +S +
Sbjct: 244 GISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTV 290
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 80/192 (41%), Gaps = 2/192 (1%)
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
D A M P + + + KR L +M G+ N T N+
Sbjct: 56 DDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNVL 115
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
F N + ++++ +++ GC P+T S L+K + ++ AL L++ M+ +GF
Sbjct: 116 INSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGF 175
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGH-KPSQVSFRRIKALMELANKQEALQ 240
+++ L + LC G A L +EKG+ +P V + + + +Q
Sbjct: 176 QPDVVIYATLINGLCKTGH-TSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAF 234
Query: 241 NLSNKMALFGPS 252
NL ++M G S
Sbjct: 235 NLFSEMITKGIS 246
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/204 (19%), Positives = 83/204 (40%), Gaps = 2/204 (0%)
Query: 20 YCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPD 79
Y ++ A +M P ++ + I+ + V + + ++M +G +
Sbjct: 49 YLHFNTLDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHN 108
Query: 80 AAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYC 139
N I ++C R+ A ++ ++++ G P+ ++ + + + +L+
Sbjct: 109 VYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFD 168
Query: 140 RMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDM 198
+M+ G P+ L+ LCK A++L M + ++V L LC
Sbjct: 169 KMIWEGFQPDVVIYATLINGLCKTGH-TSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKD 227
Query: 199 GKLVEAEKSFLEMIEKGHKPSQVS 222
+ +A F EMI KG P+ V+
Sbjct: 228 RQQTQAFNLFSEMITKGISPNIVT 251
>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
Length = 578
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 112/226 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+ P V++ LI+ YCK+ A ++ E+M+ + I+ V++Y S+I GL G+
Sbjct: 255 MVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGK 314
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++ +++EM++ G P+ + ++ +C + DA+ +D M E+ + P+ Y +
Sbjct: 315 VEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTI 374
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + + M G PN + L+ R A L ++M EKG
Sbjct: 375 LIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKG 434
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ ++ +VL LC G++ +A K EM E G +P+ +++ I
Sbjct: 435 IEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTI 480
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 114/230 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++G+ P+ +++ C++ +CK + A ++ M + ++ PDV+ YT +I G +G+
Sbjct: 325 MEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGK 384
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A V + M + G P+ YN I + + R ASGL+DEM EKG+ + TYN+
Sbjct: 385 MEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNV 444
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++R + L M G PN + +++ + ++ A ++ M +
Sbjct: 445 LIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCR 504
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALM 230
+ ++ +V C +GK+ EA EM++K P+ +++ IK M
Sbjct: 505 KRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGM 554
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 99/205 (48%), Gaps = 2/205 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G+ +V+YN LI C + +VE+ K++E+M D +SP+ I++ ++ G G
Sbjct: 290 MKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGM 349
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A D + M E PD Y I Y ++ DA + + M +KG+SPN TTYN
Sbjct: 350 MADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNC 409
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEK 179
F S D RS+ L M G + + L+ LC + E V A++L ++M E
Sbjct: 410 LITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGE-VRKAVKLLDEMSEV 468
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEA 204
G L + + CD G + A
Sbjct: 469 GLEPNHLTYNTIIQGFCDKGNIKSA 493
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 98/220 (44%), Gaps = 38/220 (17%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
+P S N L+ ++V+ A K +SPD+ ++ ++I GL +GQ KA D
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCI---AKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
V K++K +G P A YN+ I YC A + L+ EMVE G+SP A T+ +
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLI- 271
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
N YC+ T A++++ +M ++G +
Sbjct: 272 ------------NGYCKNSNTAA----------------------AVRVFEEMKQQGIAA 297
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + L LC GK+ E K EM + G P++++F
Sbjct: 298 SVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITF 337
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 97/223 (43%), Gaps = 7/223 (3%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGL---GLVGQPD 62
V PDI ++N +I C+ Q+ KA + + ++ ++P V +Y S+I G G G
Sbjct: 187 VSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMY 246
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
+LKEM E G P A + I YC A + +EM ++G++ + TYN
Sbjct: 247 HVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLI 306
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPN--TQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L M G PN T C+ L CK+ + A + M E+
Sbjct: 307 SGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCV-LKGFCKKGMMAD-ANDWIDGMTERN 364
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+++ +L D +GK+ +A M +KG P+ ++
Sbjct: 365 VEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTY 407
>gi|356519743|ref|XP_003528529.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 109/226 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G+ P+ +YNCLI YC D V+KA+K+ +MR++ I+ V++Y +IGGL +
Sbjct: 254 MKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKK 313
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++ ++ + G P+ YN I +C +++ A L +++ GLSP TYN
Sbjct: 314 FGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNT 373
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ +L + +L M P+ + L+ R E A ++ + M + G
Sbjct: 374 LIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSG 433
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ VL LC G + EA K F + E +P+ V + +
Sbjct: 434 LVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTM 479
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 104/224 (46%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MRE G+ +++YN LI C+ ++ +A K+V K+ +SP++++Y +I G V +
Sbjct: 289 MREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRK 348
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A + ++K G P YN I Y + L A L+ EM E+ ++P+ TY +
Sbjct: 349 MDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTI 408
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEK 179
F N + ++ M +G +P+ + + L LC E A +L+ + E
Sbjct: 409 LIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKE-ASKLFKSLGEM 467
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + + C G A + EM++ G P+ SF
Sbjct: 468 HLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPNVASF 511
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 84/181 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
++ G+ P +V+YN LI Y K + A +V++M + I+P ++YT +I +
Sbjct: 359 LKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNH 418
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA ++ M++ G PD Y+ + C+ +++AS L + E L PN+ YN
Sbjct: 419 TEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNT 478
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + L M+ +G +PN S + L R EK + A L M+ G
Sbjct: 479 MIHGYCKEGSSYRALRLLNEMVQSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSG 538
Query: 181 F 181
Sbjct: 539 L 539
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 104/239 (43%), Gaps = 1/239 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+ E G+ P++V Y LID CKD V A + KM + P+ +Y+ ++ G G
Sbjct: 184 LEEFGLSPNVVIYTTLIDGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGL 243
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ + + MK G P+A AYN I YC + A + EM EKG++ TYN+
Sbjct: 244 QREGFQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNI 303
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L ++ G PN + L+ K++ A++L+N + G
Sbjct: 304 LIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSG 363
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEA 238
++ + L + L A EM E+ PS+V++ I A L + ++A
Sbjct: 364 LSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKA 422
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/220 (20%), Positives = 98/220 (44%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
D S+ +I C+ K ++++ + + +SP+V+ YT++I G G A+++
Sbjct: 157 DAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNVMLAKNLF 216
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
+M G P+ Y+ + + R+ + + M G+ PNA YN +
Sbjct: 217 CKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCND 276
Query: 129 NDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVS 188
+ ++ ++ M G + L+ R +K A++L + + + G I+
Sbjct: 277 GMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTY 336
Query: 189 DVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKA 228
++L + CD+ K+ A + F ++ G P+ V++ + A
Sbjct: 337 NILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIA 376
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+ EM ++P+ V YN +I YCK+ +A +++ +M + P+V S+ S IG L +
Sbjct: 464 LGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPNVASFCSTIGLLCRDEK 523
Query: 61 PDKARDVLKEMKEYGCYPDAAAY 83
+A +L +M G P + Y
Sbjct: 524 WKEAELLLGQMINSGLKPSVSLY 546
>gi|218196744|gb|EEC79171.1| hypothetical protein OsI_19856 [Oryza sativa Indica Group]
Length = 633
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 124/278 (44%), Gaps = 37/278 (13%)
Query: 5 GVKPDIVSYNCLIDVY-CKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
GV PD + L+ VY C+ R+ + AY++V M ++PDV++Y+++I GL GQ +
Sbjct: 212 GVAPDAAACTVLVGVYACRLRRFDAAYEVVRWMVANGVAPDVVTYSTLISGLCSAGQVAE 271
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
A VL M E GC P+A Y + YC R+ +A L++ M+ G +P+ TYN+
Sbjct: 272 ALGVLDLMLEEGCQPNAHTYTPIVHAYCTGGRIHEAKRLLNTMIASGFAPSTATYNVLVE 331
Query: 124 VFY-------------------WSNDLRS----------------SWNLYCRMMGTGCLP 148
W+ D+ + S+ L +M+ G P
Sbjct: 332 ALCKVGAFEEVDALLEESTAKGWTPDVITYSSYMDGLCKAGRIDKSFALVDKMLSNGLQP 391
Query: 149 NTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSF 208
+ + L+ R A +L E G+ + ++ + + LCD + + K F
Sbjct: 392 SEVTLNILLDGVCRSSTAWAAKRLLECSAELGWDANVVNYNTVMRRLCDERRWLSVVKLF 451
Query: 209 LEMIEKGHKPSQVSFR-RIKALMELANKQEALQNLSNK 245
+M +KG P+ +F + +L +L +AL L +K
Sbjct: 452 TDMAKKGIAPNSWTFNIVVHSLCKLGRLHKALCLLRSK 489
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 103/222 (46%), Gaps = 9/222 (4%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGL-VGQPDKAR 65
+PD + + + A +++ M + ++PD + T ++G + + D A
Sbjct: 179 RPDAACFTTVAAALSSASRPGAALAVLDAMAADGVAPDAAACTVLVGVYACRLRRFDAAY 238
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+V++ M G PD Y+ I C A ++ +A G++D M+E+G PNA TY +
Sbjct: 239 EVVRWMVANGVAPDVVTYSTLISGLCSAGQVAEALGVLDLMLEEGCQPNAHTYTPIVHAY 298
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + L M+ +G P+T + LV+ LCK E+ L + KG+
Sbjct: 299 CTGGRIHEAKRLLNTMIASGFAPSTATYNVLVEALCKVGAFEEVD-ALLEESTAKGWTPD 357
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFL---EMIEKGHKPSQVSF 223
++ D LC G++ +KSF +M+ G +PS+V+
Sbjct: 358 VITYSSYMDGLCKAGRI---DKSFALVDKMLSNGLQPSEVTL 396
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 93/222 (41%), Gaps = 5/222 (2%)
Query: 7 KPDIVSYNCLIDVYCKDRQ---VEKAYKIVEKMRDE-DISPDVISYTSIIGGLGLVGQPD 62
P YN L+ + R ++A ++++MR PD +T++ L +P
Sbjct: 140 SPHPYDYNRLMSAHAGTRDGAGADRALHLLDEMRALLRRRPDAACFTTVAAALSSASRPG 199
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNY-CIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
A VL M G PDAAA + Y C +R A ++ MV G++P+ TY+
Sbjct: 200 AALAVLDAMAADGVAPDAAACTVLVGVYACRLRRFDAAYEVVRWMVANGVAPDVVTYSTL 259
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
+ + + + M+ GC PN + +V ++ A +L N M+ GF
Sbjct: 260 ISGLCSAGQVAEALGVLDLMLEEGCQPNAHTYTPIVHAYCTGGRIHEAKRLLNTMIASGF 319
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+VL + LC +G E + E KG P +++
Sbjct: 320 APSTATYNVLVEALCKVGAFEEVDALLEESTAKGWTPDVITY 361
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 95/205 (46%), Gaps = 2/205 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G +P+ +Y ++ YC ++ +A +++ M +P +Y ++ L VG
Sbjct: 279 MLEEGCQPNAHTYTPIVHAYCTGGRIHEAKRLLNTMIASGFAPSTATYNVLVEALCKVGA 338
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++ +L+E G PD Y++ + C A R+ + L+D+M+ GL P+ T N+
Sbjct: 339 FEEVDALLEESTAKGWTPDVITYSSYMDGLCKAGRIDKSFALVDKMLSNGLQPSEVTLNI 398
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSC-MFLVKLCKRQEKVEIALQLWNDMVEK 179
S+ ++ L G N + + +LC + + + ++L+ DM +K
Sbjct: 399 LLDGVCRSSTAWAAKRLLECSAELGWDANVVNYNTVMRRLCDERRWLSV-VKLFTDMAKK 457
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEA 204
G +++ LC +G+L +A
Sbjct: 458 GIAPNSWTFNIVVHSLCKLGRLHKA 482
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 95/217 (43%), Gaps = 7/217 (3%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PD+++Y+ +D CK +++K++ +V+KM + P ++ ++ G+ A
Sbjct: 353 GWTPDVITYSSYMDGLCKAGRIDKSFALVDKMLSNGLQPSEVTLNILLDGVCRSSTAWAA 412
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ +L+ E G + YN +R C +R L +M +KG++PN+ T+N+
Sbjct: 413 KRLLECSAELGWDANVVNYNTVMRRLCDERRWLSVVKLFTDMAKKGIAPNSWTFNIVVHS 472
Query: 125 FYWSNDLRSSWNLY--CRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
L + L + T NT + L E E+ L L+ M+E G
Sbjct: 473 LCKLGRLHKALCLLRSKEFVATVITYNT----LIRHLSISGEGNEVCLLLYQ-MIEGGIA 527
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
+ ++ D LC K + A F + +E PS
Sbjct: 528 PNDITYSLVIDCLCREEKFLVALCCFYQSLEDDFFPS 564
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 62/120 (51%), Gaps = 3/120 (2%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E+G ++V+YN ++ C +R+ K+ M + I+P+ ++ ++ L +G+
Sbjct: 421 ELGWDANVVNYNTVMRRLCDERRWLSVVKLFTDMAKKGIAPNSWTFNIVVHSLCKLGRLH 480
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
KA +L+ KE+ YN IR+ I+ + L+ +M+E G++PN TY+L
Sbjct: 481 KALCLLRS-KEF--VATVITYNTLIRHLSISGEGNEVCLLLYQMIEGGIAPNDITYSLVI 537
>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Glycine max]
Length = 905
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 117/236 (49%), Gaps = 2/236 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E G+ D +YN +ID +CK +V KAY+++E+M+ + + P V++Y S+I GL + +
Sbjct: 612 MKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDR 671
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + +E K + Y++ I + R+ +A +++E+++KGL+PN T+N
Sbjct: 672 LDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNC 731
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+ ++ + + M C PN + +V LCK + K A W +M ++
Sbjct: 732 LLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVR-KFNKAFVFWQEMQKQ 790
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANK 235
G + + L +G ++EA+ F G P + + + ANK
Sbjct: 791 GLKPNTITYTTMISGLARVGNVLEAKDLFERFKSSGGIPDSACYNAMIEGLSNANK 846
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 115/226 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E G+ P+I++ N +ID CK +++++A I + + +PD +++ S+I GLG G+
Sbjct: 437 MKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGK 496
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A + ++M + G P+A Y + IRN+ R D + EM+ +G SP+ N
Sbjct: 497 VNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNN 556
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + ++ L+ + G P+ +S L+ + + +L+ +M E+G
Sbjct: 557 YMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQG 616
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+++ D C GK+ +A + EM KG +P+ V++ +
Sbjct: 617 LHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSV 662
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 102/223 (45%), Gaps = 1/223 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ D+V YN ID + K +V+ A+K +++ + + PD +++TS+IG L +
Sbjct: 263 MKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSMIGVLCKAER 322
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A ++ +E+ P AYN I Y + +A L++ KG P+ YN
Sbjct: 323 VDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNC 382
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + M PN S L+ + + ++E AL++ + M E G
Sbjct: 383 ILTCLGRKGKVEEALRIL-EAMKMDAAPNLTSYNILIDMLCKAGELEAALKVQDSMKEAG 441
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I+ +++ D LC +L EA FL + K P V+F
Sbjct: 442 LFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTF 484
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 104/225 (46%), Gaps = 7/225 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E+G + + + LI V+ ++ +V+ A ++++M+ + D++ Y I G VG+
Sbjct: 228 MQEIGYEVTVHLFTTLICVFAREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGK 287
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A E+K G PD + + I C A+R+ +A L +E+ P YN
Sbjct: 288 VDMAWKFFHELKSQGLVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNT 347
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDM---V 177
+ +++L R GC+P+ + ++ R+ KVE AL++ M
Sbjct: 348 MIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMKMDA 407
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
SY ++L D+LC G+L A K M E G P+ ++
Sbjct: 408 APNLTSY----NILIDMLCKAGELEAALKVQDSMKEAGLFPNIIT 448
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 92/208 (44%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD V++ LID + +V AY + EKM D +P+ + YTS+I G+ + +
Sbjct: 479 PDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKI 538
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
KEM GC PD N + A + L +E+ +GL+P+ +Y++
Sbjct: 539 YKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVK 598
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ ++ L+ M G +T++ ++ + KV A QL +M KG ++
Sbjct: 599 GGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVT 658
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
+ D L + +L EA F E K
Sbjct: 659 YGSVIDGLAKIDRLDEAYMLFEEAKSKA 686
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 106/252 (42%), Gaps = 34/252 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
++ G+ PD V++ +I V CK +V++A ++ E++ P V +Y ++I G G VG+
Sbjct: 298 LKSQGLVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGK 357
Query: 61 PDKARDVLKEMKEYGCYP------------------------------DAA----AYNAA 86
++A +L+ K GC P DAA +YN
Sbjct: 358 FNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMKMDAAPNLTSYNIL 417
Query: 87 IRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGC 146
I C A L A + D M E GL PN T N+ + L + +++ + C
Sbjct: 418 IDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVC 477
Query: 147 LPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEK 206
P++ + L+ R KV A L+ M++ G +V L G+ + K
Sbjct: 478 TPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHK 537
Query: 207 SFLEMIEKGHKP 218
+ EM+ +G P
Sbjct: 538 IYKEMMHRGCSP 549
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 112/248 (45%), Gaps = 4/248 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G P+ V Y LI + K + E +KI ++M SPD++ + + + G+
Sbjct: 507 MLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGE 566
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+K R + +E+K G PD +Y+ I +D L EM E+GL + YN+
Sbjct: 567 IEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNI 626
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F S + ++ L M G P + ++ + ++++ A L+ + K
Sbjct: 627 VIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKA 686
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEAL 239
++V L D +G++ EA E+++KG P+ ++ + AL++ EAL
Sbjct: 687 VDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEAL 746
Query: 240 ---QNLSN 244
QN+ N
Sbjct: 747 VCFQNMKN 754
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 63/110 (57%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ + P+ V+Y+ +++ CK R+ KA+ ++M+ + + P+ I+YT++I GL VG
Sbjct: 752 MKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGN 811
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKG 110
+A+D+ + K G PD+A YNA I A + DA L +E KG
Sbjct: 812 VLEAKDLFERFKSSGGIPDSACYNAMIEGLSNANKAMDAYILFEETRLKG 861
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 96/230 (41%), Gaps = 35/230 (15%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G++P +V+Y +ID K ++++AY + E+ + + + +V+ Y+S+I G G VG+
Sbjct: 647 MKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGR 706
Query: 61 PDKARDVLKE-----------------------------------MKEYGCYPDAAAYNA 85
D+A +L+E MK C P+ Y+
Sbjct: 707 IDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSI 766
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
+ C ++ A EM ++GL PN TY ++ + +L+ R +G
Sbjct: 767 MVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNVLEAKDLFERFKSSG 826
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLL 195
+P++ +++ K A L+ + KG Y VL D L
Sbjct: 827 GIPDSACYNAMIEGLSNANKAMDAYILFEETRLKGCRIYSKTCVVLLDAL 876
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 100/228 (43%), Gaps = 1/228 (0%)
Query: 16 LIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYG 75
++ + K R++ +A+ ++E MR P +YT++IG L + D +L++M+E G
Sbjct: 173 MVASFVKSRKLREAFGVIETMRKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIG 232
Query: 76 CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSW 135
+ I + R+ A L+DEM + + YN+ F + +W
Sbjct: 233 YEVTVHLFTTLICVFAREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAW 292
Query: 136 NLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLL 195
+ + G +P+ + ++ + + E+V+ A++L+ ++ + + +
Sbjct: 293 KFFHELKSQGLVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGY 352
Query: 196 CDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANK-QEALQNL 242
+GK EA KG PS +++ I + K +EAL+ L
Sbjct: 353 GSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIL 400
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 90/203 (44%), Gaps = 3/203 (1%)
Query: 22 KDRQVEKAY-KIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDA 80
KD +V Y + VE+ + SP+ +Y +++ + + +L+EM G P
Sbjct: 110 KDVRVALHYFRWVERKTKQLHSPE--AYNALLMLMARTRNLEYLEQILEEMSMAGFGPSN 167
Query: 81 AAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCR 140
+ ++ +++LR+A G+++ M + P + Y +++ L +
Sbjct: 168 NTCIEMVASFVKSRKLREAFGVIETMRKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQ 227
Query: 141 MMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGK 200
M G L+ + R+ +V+ AL L ++M F + +++ +V D +GK
Sbjct: 228 MQEIGYEVTVHLFTTLICVFAREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGK 287
Query: 201 LVEAEKSFLEMIEKGHKPSQVSF 223
+ A K F E+ +G P V+F
Sbjct: 288 VDMAWKFFHELKSQGLVPDDVTF 310
>gi|297724097|ref|NP_001174412.1| Os05g0393900 [Oryza sativa Japonica Group]
gi|255676341|dbj|BAH93140.1| Os05g0393900 [Oryza sativa Japonica Group]
Length = 553
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 124/278 (44%), Gaps = 37/278 (13%)
Query: 5 GVKPDIVSYNCLIDVY-CKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
GV PD + L+ VY C+ R+ + AY++V M ++PDV++Y+++I GL GQ +
Sbjct: 132 GVAPDAAACTVLVGVYACRLRRFDAAYEVVRWMVANGVAPDVVTYSTLISGLCSAGQVAE 191
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
A VL M E GC P+A Y + YC R+ +A L++ M+ G +P+ TYN+
Sbjct: 192 ALGVLDLMLEEGCQPNAHTYTPIVHAYCTGGRIHEAKRLLNTMIASGFAPSTATYNVLVE 251
Query: 124 VFY-------------------WSNDLRS----------------SWNLYCRMMGTGCLP 148
W+ D+ + S+ L +M+ G P
Sbjct: 252 ALCKVGAFEEVDALLEESTAKGWTPDVITYSSYMDGLCKAGRIDKSFALVDKMLSNGLQP 311
Query: 149 NTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSF 208
+ + L+ R A +L E G+ + ++ + + LCD + + K F
Sbjct: 312 SEVTLNILLDGVCRSSTAWAAKRLLECSAELGWDANVVNYNTVMRKLCDEHRWLSVVKLF 371
Query: 209 LEMIEKGHKPSQVSFR-RIKALMELANKQEALQNLSNK 245
+M +KG P+ +F + +L +L +AL L +K
Sbjct: 372 TDMAKKGIAPNSWTFNIVVHSLCKLGRLHKALFLLRSK 409
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 103/222 (46%), Gaps = 9/222 (4%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGL-VGQPDKAR 65
+PD + + + A +++ M + ++PD + T ++G + + D A
Sbjct: 99 RPDAACFTTVAAALSSASRPGAALAVLDAMAADGVAPDAAACTVLVGVYACRLRRFDAAY 158
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+V++ M G PD Y+ I C A ++ +A G++D M+E+G PNA TY +
Sbjct: 159 EVVRWMVANGVAPDVVTYSTLISGLCSAGQVAEALGVLDLMLEEGCQPNAHTYTPIVHAY 218
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + L M+ +G P+T + LV+ LCK E+ L + KG+
Sbjct: 219 CTGGRIHEAKRLLNTMIASGFAPSTATYNVLVEALCKVGAFEEVD-ALLEESTAKGWTPD 277
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFL---EMIEKGHKPSQVSF 223
++ D LC G++ +KSF +M+ G +PS+V+
Sbjct: 278 VITYSSYMDGLCKAGRI---DKSFALVDKMLSNGLQPSEVTL 316
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 92/216 (42%), Gaps = 5/216 (2%)
Query: 13 YNCLIDVYCKDRQ---VEKAYKIVEKMRDE-DISPDVISYTSIIGGLGLVGQPDKARDVL 68
YN L+ + R ++A ++++MR PD +T++ L +P A VL
Sbjct: 66 YNRLMSAHAGTRDGAGADRALHLLDEMRALLRRRPDAACFTTVAAALSSASRPGAALAVL 125
Query: 69 KEMKEYGCYPDAAAYNAAIRNY-CIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
M G PDAAA + Y C +R A ++ MV G++P+ TY+
Sbjct: 126 DAMAADGVAPDAAACTVLVGVYACRLRRFDAAYEVVRWMVANGVAPDVVTYSTLISGLCS 185
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ + + + M+ GC PN + +V ++ A +L N M+ GF
Sbjct: 186 AGQVAEALGVLDLMLEEGCQPNAHTYTPIVHAYCTGGRIHEAKRLLNTMIASGFAPSTAT 245
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+VL + LC +G E + E KG P +++
Sbjct: 246 YNVLVEALCKVGAFEEVDALLEESTAKGWTPDVITY 281
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 94/205 (45%), Gaps = 2/205 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G +P+ +Y ++ YC ++ +A +++ M +P +Y ++ L VG
Sbjct: 199 MLEEGCQPNAHTYTPIVHAYCTGGRIHEAKRLLNTMIASGFAPSTATYNVLVEALCKVGA 258
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++ +L+E G PD Y++ + C A R+ + L+D+M+ GL P+ T N+
Sbjct: 259 FEEVDALLEESTAKGWTPDVITYSSYMDGLCKAGRIDKSFALVDKMLSNGLQPSEVTLNI 318
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSC-MFLVKLCKRQEKVEIALQLWNDMVEK 179
S+ ++ L G N + + KLC + + ++L+ DM +K
Sbjct: 319 LLDGVCRSSTAWAAKRLLECSAELGWDANVVNYNTVMRKLCDEHRWLSV-VKLFTDMAKK 377
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEA 204
G +++ LC +G+L +A
Sbjct: 378 GIAPNSWTFNIVVHSLCKLGRLHKA 402
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 94/217 (43%), Gaps = 7/217 (3%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PD+++Y+ +D CK +++K++ +V+KM + P ++ ++ G+ A
Sbjct: 273 GWTPDVITYSSYMDGLCKAGRIDKSFALVDKMLSNGLQPSEVTLNILLDGVCRSSTAWAA 332
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ +L+ E G + YN +R C R L +M +KG++PN+ T+N+
Sbjct: 333 KRLLECSAELGWDANVVNYNTVMRKLCDEHRWLSVVKLFTDMAKKGIAPNSWTFNIVVHS 392
Query: 125 FYWSNDLRSSWNLY--CRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
L + L + T NT + L E E+ L L+ M+E G
Sbjct: 393 LCKLGRLHKALFLLRSKEFVATVITYNT----LIRHLSISGEGNEVCLLLYQ-MIEGGIA 447
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
+ ++ D LC K + A F + +E PS
Sbjct: 448 PNDITYSLVIDCLCREEKFLVALCCFYQSLEDDFFPS 484
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 61/118 (51%), Gaps = 3/118 (2%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E+G ++V+YN ++ C + + K+ M + I+P+ ++ ++ L +G+
Sbjct: 341 ELGWDANVVNYNTVMRKLCDEHRWLSVVKLFTDMAKKGIAPNSWTFNIVVHSLCKLGRLH 400
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA +L+ KE+ YN IR+ I+ + L+ +M+E G++PN TY+L
Sbjct: 401 KALFLLRS-KEF--VATVITYNTLIRHLSISGEGNEVCLLLYQMIEGGIAPNDITYSL 455
>gi|356540375|ref|XP_003538665.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Glycine max]
Length = 1476
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 116/252 (46%), Gaps = 2/252 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEK--AYKIVEKMRDEDISPDVISYTSIIGGLGLV 58
MRE G PD+VS+N LI+ K +E A +++ ++R I PD+I+Y ++I
Sbjct: 275 MRERGCVPDLVSFNTLINARMKSGAMEPNLALQLLNEVRRSGIRPDIITYNTLISACSRE 334
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
++A V +M+ + C PD YNA I Y R R A L E+ KG P+A TY
Sbjct: 335 SNLEEAVAVFSDMESHRCQPDLWTYNAMISVYGRCARARKAEELFKELESKGFFPDAVTY 394
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
N F + ++ M+ G + + ++ + +Q + + A+Q++ DM
Sbjct: 395 NSLLYAFSREGNTEKVRDICEEMVKRGFGQDEMTYNTIIHMYGKQGRHDQAMQIYRDMKS 454
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEA 238
G + VL D L K+ EA EM++ G KP+ ++ + A K+E
Sbjct: 455 SGRNPDAVTYTVLIDSLGKASKVEEAANVMSEMLDAGVKPTLHTYSALICAYAKAGKREE 514
Query: 239 LQNLSNKMALFG 250
+ N M G
Sbjct: 515 AEETFNCMRRSG 526
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 105/223 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+R G++PDI++YN LI ++ +E+A + M PD+ +Y ++I G +
Sbjct: 312 VRRSGIRPDIITYNTLISACSRESNLEEAVAVFSDMESHRCQPDLWTYNAMISVYGRCAR 371
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA ++ KE++ G +PDA YN+ + + + +EMV++G + TYN
Sbjct: 372 ARKAEELFKELESKGFFPDAVTYNSLLYAFSREGNTEKVRDICEEMVKRGFGQDEMTYNT 431
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++ + +Y M +G P+ + L+ + KVE A + ++M++ G
Sbjct: 432 IIHMYGKQGRHDQAMQIYRDMKSSGRNPDAVTYTVLIDSLGKASKVEEAANVMSEMLDAG 491
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ L GK EAE++F M G KP ++++
Sbjct: 492 VKPTLHTYSALICAYAKAGKREEAEETFNCMRRSGIKPDRLAY 534
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 95/212 (44%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
+PD+ +YN +I VY + + KA ++ +++ + PD ++Y S++ G +K RD
Sbjct: 353 QPDLWTYNAMISVYGRCARARKAEELFKELESKGFFPDAVTYNSLLYAFSREGNTEKVRD 412
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
+ +EM + G D YN I Y R A + +M G +P+A TY +
Sbjct: 413 ICEEMVKRGFGQDEMTYNTIIHMYGKQGRHDQAMQIYRDMKSSGRNPDAVTYTVLIDSLG 472
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
++ + + N+ M+ G P + L+ + K E A + +N M G L
Sbjct: 473 KASKVEEAANVMSEMLDAGVKPTLHTYSALICAYAKAGKREEAEETFNCMRRSGIKPDRL 532
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
V+ D ++ +A + EMI +G P
Sbjct: 533 AYSVMLDFFLRFNEMKKAMGLYHEMIREGFTP 564
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 88/177 (49%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PD V+YN L+ + ++ EK I E+M D ++Y +II G G+ D+A
Sbjct: 386 GFFPDAVTYNSLLYAFSREGNTEKVRDICEEMVKRGFGQDEMTYNTIIHMYGKQGRHDQA 445
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ ++MK G PDA Y I + A ++ +A+ +M EM++ G+ P TY+
Sbjct: 446 MQIYRDMKSSGRNPDAVTYTVLIDSLGKASKVEEAANVMSEMLDAGVKPTLHTYSALICA 505
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
+ + + + M +G P+ + ++ R +++ A+ L+++M+ +GF
Sbjct: 506 YAKAGKREEAEETFNCMRRSGIKPDRLAYSVMLDFFLRFNEMKKAMGLYHEMIREGF 562
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 93/196 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G D ++YN +I +Y K + ++A +I M+ +PD ++YT +I LG +
Sbjct: 417 MVKRGFGQDEMTYNTIIHMYGKQGRHDQAMQIYRDMKSSGRNPDAVTYTVLIDSLGKASK 476
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A +V+ EM + G P Y+A I Y A + +A + M G+ P+ Y++
Sbjct: 477 VEEAANVMSEMLDAGVKPTLHTYSALICAYAKAGKREEAEETFNCMRRSGIKPDRLAYSV 536
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F N+++ + LY M+ G P+ ++ R+ ++ ++ DM E
Sbjct: 537 MLDFFLRFNEMKKAMGLYHEMIREGFTPDNGLYEVMMHALVRENMWDVVDRIIRDMEELS 596
Query: 181 FGSYILVSDVLFDLLC 196
+ ++S VL C
Sbjct: 597 GMNPQVISSVLVKGGC 612
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 77/150 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+++ +KPD +YN LI +YC+DR+ E+ + ++ KMR + P + +Y S+I
Sbjct: 975 IQDASLKPDEETYNTLIIMYCRDRRPEEGFSLMNKMRSLGLEPKLDTYRSLITAFNKQRM 1034
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A ++ +E++ G D A Y+ ++ Y + R A L+ M E G+ P +T +L
Sbjct: 1035 YEQAEELFEELRSNGYKLDRAFYHLMMKTYRTSGDHRKAENLLAIMKESGIEPTISTMHL 1094
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNT 150
+ S + N+ + TG + +T
Sbjct: 1095 LMVSYGKSGQPEEAENVLKNLRTTGVVLDT 1124
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 91/216 (42%), Gaps = 6/216 (2%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G P + S N L+ DR++ + Y ++++++D + IS +SI+ L Q
Sbjct: 839 GPSPTVDSVNGLLQALIVDRRLNELYVVIQELQDMGLK---ISKSSILLTLEAFAQAGNL 895
Query: 65 RDVLK---EMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
+V K MK G +P Y +R C KR+RD ++ EM E G P+ N
Sbjct: 896 FEVQKIYNGMKAAGYFPTMHVYRIMLRLLCKCKRVRDVETMLCEMEEAGFQPDLQICNSI 955
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
+++ D +S +Y ++ P+ ++ L+ + R + E L N M G
Sbjct: 956 LKLYLGIEDFKSMGIIYQKIQDASLKPDEETYNTLIIMYCRDRRPEEGFSLMNKMRSLGL 1015
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHK 217
+ L +AE+ F E+ G+K
Sbjct: 1016 EPKLDTYRSLITAFNKQRMYEQAEELFEELRSNGYK 1051
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 55/124 (44%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+R G K D Y+ ++ Y KA ++ M++ I P + + ++ G GQ
Sbjct: 1045 LRSNGYKLDRAFYHLMMKTYRTSGDHRKAENLLAIMKESGIEPTISTMHLLMVSYGKSGQ 1104
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
P++A +VLK ++ G D Y++ I Y + + EM E G+ P+ +
Sbjct: 1105 PEEAENVLKNLRTTGVVLDTLPYSSVIDAYLKKGDFKAGIEKLTEMKEAGIEPDHRIWTC 1164
Query: 121 FFRV 124
F R
Sbjct: 1165 FIRA 1168
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/261 (20%), Positives = 108/261 (41%), Gaps = 8/261 (3%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
DI Y +++ Y K + +KA +V +R D + ++I G ++AR +
Sbjct: 773 DISVYIDIVETYGKLKIWQKAESLVGSLRQRCSKMDRKVWNALIHAYAFSGCYERARAIF 832
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
M G P + N ++ + +RL + ++ E+ + GL + ++ L F +
Sbjct: 833 NTMMRDGPSPTVDSVNGLLQALIVDRRLNELYVVIQELQDMGLKISKSSILLTLEAFAQA 892
Query: 129 NDLRSSWNLYCRMMGTGCLPNTQSCMFLVKL---CKRQEKVEIALQLWNDMVEKGFGSYI 185
+L +Y M G P +++L CKR VE L +M E GF +
Sbjct: 893 GNLFEVQKIYNGMKAAGYFPTMHVYRIMLRLLCKCKRVRDVETML---CEMEEAGFQPDL 949
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNK 245
+ + + L + + ++ + KP + ++ + + + E +L NK
Sbjct: 950 QICNSILKLYLGIEDFKSMGIIYQKIQDASLKPDEETYNTLIIMYCRDRRPEEGFSLMNK 1009
Query: 246 MALFGPSMIPKREEYLAEMSA 266
M G + PK + Y + ++A
Sbjct: 1010 MRSLG--LEPKLDTYRSLITA 1028
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 55/111 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E G++P I + + L+ Y K Q E+A +++ +R + D + Y+S+I G
Sbjct: 1080 MKESGIEPTISTMHLLMVSYGKSGQPEEAENVLKNLRTTGVVLDTLPYSSVIDAYLKKGD 1139
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGL 111
+ L EMKE G PD + IR +++ +A L++ + + G
Sbjct: 1140 FKAGIEKLTEMKEAGIEPDHRIWTCFIRAATLSEGTNEAIVLLNALQDAGF 1190
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/220 (20%), Positives = 86/220 (39%), Gaps = 2/220 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDI--SPDVISYTSIIGGLGLV 58
MR GV+ Y ++ VYC+ E A+ ++ I D+ Y I+ G +
Sbjct: 728 MRFNGVESSECLYQGMVSVYCRMDLPETAHHLLYHAEKNGIILDNDISVYIDIVETYGKL 787
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
KA ++ +++ D +NA I Y + A + + M+ G SP +
Sbjct: 788 KIWQKAESLVGSLRQRCSKMDRKVWNALIHAYAFSGCYERARAIFNTMMRDGPSPTVDSV 847
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
N + L + + + G + S + ++ + + +++N M
Sbjct: 848 NGLLQALIVDRRLNELYVVIQELQDMGLKISKSSILLTLEAFAQAGNLFEVQKIYNGMKA 907
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
G+ + V ++ LLC ++ + E EM E G +P
Sbjct: 908 AGYFPTMHVYRIMLRLLCKCKRVRDVETMLCEMEEAGFQP 947
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 65/159 (40%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+R+ K D +N LI Y E+A I M + SP V S ++ L + +
Sbjct: 800 LRQRCSKMDRKVWNALIHAYAFSGCYERARAIFNTMMRDGPSPTVDSVNGLLQALIVDRR 859
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++ V++E+++ G ++ + + A L + + + M G P Y +
Sbjct: 860 LNELYVVIQELQDMGLKISKSSILLTLEAFAQAGNLFEVQKIYNGMKAAGYFPTMHVYRI 919
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKL 159
R+ +R + C M G P+ Q C ++KL
Sbjct: 920 MLRLLCKCKRVRDVETMLCEMEEAGFQPDLQICNSILKL 958
>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 763
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 111/227 (48%), Gaps = 1/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PDI ++N LI Y ++E A +I++ M D + PDV +Y S++ GL +
Sbjct: 452 MISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSK 511
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ + K M E GC P+ +N + + C +L A GL++EM K ++P+A T+
Sbjct: 512 YEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGT 571
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLP-NTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
F + DL ++ L+ +M + +T + ++ + V +A +L+ +MV++
Sbjct: 572 LIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDR 631
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G ++ D C G + K LEM+E G PS + R+
Sbjct: 632 CLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRV 678
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 99/219 (45%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PD +Y LID C + + +A + + + I P+VI Y ++I GL G +A
Sbjct: 351 GFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEA 410
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ EM E G P+ +N + C + DA GL+ M+ KG P+ T+N+
Sbjct: 411 AQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHG 470
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + ++ + MM G P+ + L+ + K E ++ + MVEKG
Sbjct: 471 YSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPN 530
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ ++L + LC KL +A EM K P V+F
Sbjct: 531 LFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTF 569
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 102/219 (46%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV P++ +YN I C+ +++ A ++V ++ D+ PDV++Y +I GL + +A
Sbjct: 246 GVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEA 305
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
L ++ G PD+ YN I YC ++ A ++ V G P+ TY
Sbjct: 306 EVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDG 365
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + L+ +G G PN L+K Q + A QL ++M EKG
Sbjct: 366 LCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPE 425
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ ++L + LC MG + +A+ MI KG+ P +F
Sbjct: 426 VQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTF 464
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 96/209 (45%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+KP+++ YN LI + +A ++ +M ++ + P+V ++ ++ GL +G A
Sbjct: 386 GIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDA 445
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++K M G +PD +N I Y ++ +A ++D M++ G+ P+ TYN
Sbjct: 446 DGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNG 505
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
++ Y M+ GC PN + L++ R K++ AL L +M K
Sbjct: 506 LCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPD 565
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIE 213
+ L D C G L A F +M E
Sbjct: 566 AVTFGTLIDGFCKNGDLDGAYTLFRKMEE 594
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 104/256 (40%), Gaps = 35/256 (13%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
+ G KPD+V+YN LI CK+ + ++A + K+ +E + PD +Y ++I G G
Sbjct: 279 DQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQ 338
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
A +L G PD Y + I C A L +E + KG+ PN YN
Sbjct: 339 LAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLI 398
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCK-------------------- 161
+ + + L M G +P Q+ LV LCK
Sbjct: 399 KGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYF 458
Query: 162 --------------RQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKS 207
Q K+E AL++ + M++ G + + L + LC K + ++
Sbjct: 459 PDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMET 518
Query: 208 FLEMIEKGHKPSQVSF 223
+ M+EKG P+ +F
Sbjct: 519 YKTMVEKGCAPNLFTF 534
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 107/223 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV + ++N L+ V CK V++ K+++K+ + P++ +Y I GL G+
Sbjct: 207 MLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGE 266
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A ++ + + G PD YN I C + ++A + ++V +GL P++ TYN
Sbjct: 267 LDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNT 326
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ + + + G +P+ + L+ + + AL L+N+ + KG
Sbjct: 327 LIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKG 386
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+++ + L L + G ++EA + EM EKG P +F
Sbjct: 387 IKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTF 429
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 106/223 (47%), Gaps = 2/223 (0%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
+P + SYN ++ + ++A+K+ +MRD I+PDV S+T + +P A
Sbjct: 108 EPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCRTSRPHAALR 167
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
+L M GC + AY + + + L +M+ G+S +T+N V
Sbjct: 168 LLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKMLASGVSLCLSTFNKLLHVLC 227
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYI 185
D++ L +++ G LPN + F ++ LC++ E ++ A+++ ++++G +
Sbjct: 228 KKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGE-LDAAVRMVGRLIDQGPKPDV 286
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKA 228
+ + L LC K EAE +++ +G +P ++ + A
Sbjct: 287 VTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIA 329
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 92/182 (50%), Gaps = 1/182 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G P++ ++N L++ C+ +++KA ++E+M+++ ++PD +++ ++I G G
Sbjct: 522 MVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGD 581
Query: 61 PDKARDVLKEMKE-YGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
D A + ++M+E Y YN I + + A L EMV++ L P+ TY
Sbjct: 582 LDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYR 641
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
L F + ++ + MM G +P+ + ++ +++V A + + MV+K
Sbjct: 642 LMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQK 701
Query: 180 GF 181
G
Sbjct: 702 GL 703
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/227 (20%), Positives = 106/227 (46%), Gaps = 2/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G+ PD+ S+ + +C+ + A +++ M + +V++Y +++GG
Sbjct: 137 MRDRGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENF 196
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+ ++ +M G + +N + C +++ L+D+++++G+ PN TYN
Sbjct: 197 KDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNF 256
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEK 179
F + +L ++ + R++ G P+ + +L+ LCK + E + L +V +
Sbjct: 257 FIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGK-LVNE 315
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G + L C G + AE+ + + G P + ++R +
Sbjct: 316 GLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSL 362
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 103/223 (46%), Gaps = 7/223 (3%)
Query: 20 YCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPD 79
Y + +V++A + E+M D P V SY +I+ L G D+A V M++ G PD
Sbjct: 86 YGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGITPD 145
Query: 80 AAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYC 139
++ ++++C R A L++ M +G N Y FY N + L+
Sbjct: 146 VYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFG 205
Query: 140 RMMGTG---CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLC 196
+M+ +G CL + + LCK+ + E +L + ++++G + + LC
Sbjct: 206 KMLASGVSLCLSTFNKLLHV--LCKKGDVKECE-KLLDKVIKRGVLPNLFTYNFFIQGLC 262
Query: 197 DMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEA 238
G+L A + +I++G KP V++ I L + + QEA
Sbjct: 263 QKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEA 305
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 50/105 (47%)
Query: 12 SYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEM 71
+YN +I + + V A K+ ++M D + PD +Y ++ G G D L EM
Sbjct: 604 TYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEM 663
Query: 72 KEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNAT 116
E G P I C+ R+ +A+G++ MV+KGL P A
Sbjct: 664 MENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV 708
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 71/155 (45%), Gaps = 2/155 (1%)
Query: 28 KAYKIVEKMRDEDISPDVIS-YTSIIGGLGLVGQPDKARDVLKEMKE-YGCYPDAAAYNA 85
KA ++ MR ED +S Y SII LGL G+ + +VL +M++ G + Y
Sbjct: 22 KALEMFNSMRKEDGFKHTLSTYRSIIEKLGLYGKFEAMEEVLVDMRQNVGNHMLEGVYVG 81
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
A++NY ++++A + + M P +YN + S + +Y RM G
Sbjct: 82 AMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRG 141
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
P+ S +K R + AL+L N+M +G
Sbjct: 142 ITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQG 176
>gi|242047668|ref|XP_002461580.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
gi|241924957|gb|EER98101.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
Length = 532
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 117/246 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ PD+V+ N +ID CK + ++KA +++ +M D+ I PD +Y S++ G GQ
Sbjct: 147 MLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHIMPDCTTYNSLVHGYLSSGQ 206
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A +LK+M +G P+ Y+ I C +A +++ M++ +PN TY
Sbjct: 207 LKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAREILNSMIQSRGNPNVATYGG 266
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ DL NL M+ G P+ + + +++ A+ +N M ++G
Sbjct: 267 LLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVKCGRLDEAMLTFNKMRQQG 326
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
I+ + D LC +G+L A F +MI+ G P V F + + K E +
Sbjct: 327 LMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVFTNLIHGFSMYGKWEKAE 386
Query: 241 NLSNKM 246
L +M
Sbjct: 387 ELFYEM 392
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 99/222 (44%), Gaps = 16/222 (7%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G+ PDI+SY +ID CK +++ A +M D+ +SPD++ +T++I G + G+
Sbjct: 322 MRQQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVFTNLIHGFSMYGK 381
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA ++ EM + G P + I ++ +A L D M + PN +YN
Sbjct: 382 WEKAEELFYEMMDRGIRPTVVVFTTMIDKLFKEGKVTEAKTLFDLMPIASVKPNVVSYNA 441
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++ + L L M+ G PN + L +DM+ G
Sbjct: 442 IIHGYFLAGKLDEVLKLLDDMLSVGLKPNAVTFN----------------TLLDDMLSMG 485
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
+ + L D C+ G++ + F EM+ K K V+
Sbjct: 486 LKPDVATCNTLIDSCCEDGRIEDVLTLFREMLSKAAKTDTVT 527
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 112/248 (45%), Gaps = 6/248 (2%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRD--EDISPDVISYTSIIGGLGLVGQ 60
++G PD+ SY L+ C +++ E+A ++ M + + P+V+SYT++I G +
Sbjct: 77 KLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYTTVIHGFFKEDE 136
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA + EM + G PD N+ I C + + A ++ +M +K + P+ TTYN
Sbjct: 137 VGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHIMPDCTTYNS 196
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+ S L+ + + +M G PN + L+ LCK E A ++ N M++
Sbjct: 197 LVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTE-AREILNSMIQS 255
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEA 238
+ L G LVE M++ G +P F +I A ++ EA
Sbjct: 256 RGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVKCGRLDEA 315
Query: 239 LQNLSNKM 246
+ NKM
Sbjct: 316 MLTF-NKM 322
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 113/250 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P+ V+Y+ LID CK +A +I+ M +P+V +Y ++ G G
Sbjct: 217 MSRHGQPPNGVTYSMLIDCLCKFGGHTEAREILNSMIQSRGNPNVATYGGLLHGYATKGD 276
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ +++ M + G PD +N I Y RL +A ++M ++GL P+ +Y
Sbjct: 277 LVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVKCGRLDEAMLTFNKMRQQGLMPDIISYGT 336
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
L ++ + +C+M+ G P+ L+ K E A +L+ +M+++G
Sbjct: 337 MIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVFTNLIHGFSMYGKWEKAEELFYEMMDRG 396
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
++V + D L GK+ EA+ F M KP+ VS+ I LA K + +
Sbjct: 397 IRPTVVVFTTMIDKLFKEGKVTEAKTLFDLMPIASVKPNVVSYNAIIHGYFLAGKLDEVL 456
Query: 241 NLSNKMALFG 250
L + M G
Sbjct: 457 KLLDDMLSVG 466
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 108/244 (44%), Gaps = 6/244 (2%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
V P V+Y LI C + A+ + ++ + + IS+T I+ L + A
Sbjct: 9 VAPTTVTYTILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCAEKRTSDAM 68
Query: 66 D-VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKG--LSPNATTYNLFF 122
+ V++ + GC PD +Y ++ C K+ +A L+ M E G PN +Y
Sbjct: 69 NIVIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYTTVI 128
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGF 181
F+ +++ ++ L+C M+ G P+ +C ++ LCK Q ++ A ++ M +K
Sbjct: 129 HGFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQ-AMDKAEEVLRQMFDKHI 187
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQ 240
+ L G+L EA + +M G P+ V++ I L + EA +
Sbjct: 188 MPDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEARE 247
Query: 241 NLSN 244
L++
Sbjct: 248 ILNS 251
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 61/140 (43%), Gaps = 19/140 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G++P +V + +ID K+ +V +A + + M + P+V+SY +II G L G+
Sbjct: 392 MMDRGIRPTVVVFTTMIDKLFKEGKVTEAKTLFDLMPIASVKPNVVSYNAIIHGYFLAGK 451
Query: 61 PDKA-------------------RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASG 101
D+ +L +M G PD A N I + C R+ D
Sbjct: 452 LDEVLKLLDDMLSVGLKPNAVTFNTLLDDMLSMGLKPDVATCNTLIDSCCEDGRIEDVLT 511
Query: 102 LMDEMVEKGLSPNATTYNLF 121
L EM+ K + T N+
Sbjct: 512 LFREMLSKAAKTDTVTENII 531
>gi|225456631|ref|XP_002266698.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74750
[Vitis vinifera]
Length = 875
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 102/219 (46%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
R+ G K D +Y ++ + + RQ K++ +M + P+V++Y +I G
Sbjct: 371 RQTGFKHDGHTYTTMVGILGRARQFGAINKLLAEMVRDGCQPNVVTYNRLIHSYGRANYL 430
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
++A V M+E GC PD Y I + A L A + +M E LSP+ TY++
Sbjct: 431 NEAVSVFDRMQEAGCQPDRVTYCTLIDIHAKAGFLDVALHMYQKMQEAHLSPDTFTYSVI 490
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
+ L S+ L+C M+ GC+PN + ++ L + AL+L+ DM GF
Sbjct: 491 INCLGKAGHLTSAHKLFCEMVDQGCVPNLVTYNIMIALQAKARNYPTALELYRDMQNAGF 550
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQ 220
+ ++ ++L G L EAE F EM K P +
Sbjct: 551 QPDKVTYSIVMEVLGHCGHLEEAEAIFTEMKRKNWVPDE 589
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 97/219 (44%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E G +PD V+Y LID++ K ++ A + +KM++ +SPD +Y+ II LG G
Sbjct: 440 MQEAGCQPDRVTYCTLIDIHAKAGFLDVALHMYQKMQEAHLSPDTFTYSVIINCLGKAGH 499
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A + EM + GC P+ YN I A+ A L +M G P+ TY++
Sbjct: 500 LTSAHKLFCEMVDQGCVPNLVTYNIMIALQAKARNYPTALELYRDMQNAGFQPDKVTYSI 559
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
V L + ++ M +P+ LV L + VE + + + M+ G
Sbjct: 560 VMEVLGHCGHLEEAEAIFTEMKRKNWVPDEPVYGLLVDLWGKVGNVEKSWEWYQAMLNAG 619
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
+ + L + +L +A M+ G +PS
Sbjct: 620 LCPNVPTCNSLLSAFLRVHRLSDAYNLLQSMLRLGLQPS 658
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 71/160 (44%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G P++V+YN +I + K R A ++ M++ PD ++Y+ ++ LG G
Sbjct: 510 MVDQGCVPNLVTYNIMIALQAKARNYPTALELYRDMQNAGFQPDKVTYSIVMEVLGHCGH 569
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A + EMK PD Y + + + + M+ GL PN T N
Sbjct: 570 LEEAEAIFTEMKRKNWVPDEPVYGLLVDLWGKVGNVEKSWEWYQAMLNAGLCPNVPTCNS 629
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLC 160
F + L ++NL M+ G P+ Q+ L+ C
Sbjct: 630 LLSAFLRVHRLSDAYNLLQSMLRLGLQPSLQTYTLLLSCC 669
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 78/161 (48%), Gaps = 8/161 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G +PD V+Y+ +++V +E+A I +M+ ++ PD Y ++ G VG
Sbjct: 545 MQNAGFQPDKVTYSIVMEVLGHCGHLEEAEAIFTEMKRKNWVPDEPVYGLLVDLWGKVGN 604
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+K+ + + M G P+ N+ + + RL DA L+ M+ GL P+ TY L
Sbjct: 605 VEKSWEWYQAMLNAGLCPNVPTCNSLLSAFLRVHRLSDAYNLLQSMLRLGLQPSLQTYTL 664
Query: 121 FFRVFYWSNDLRSSWNL-YC-RMMGTGCLPNTQSCMFLVKL 159
+ RSS+++ +C +M P + MFL+ +
Sbjct: 665 LLSC---CTEARSSFDMGFCGELMAVTGHP---AHMFLLSM 699
>gi|255660986|gb|ACU25662.1| pentatricopeptide repeat-containing protein [Glandularia subincana]
Length = 376
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 111/241 (46%), Gaps = 3/241 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G D ++Y L+ +CK+ ++K+ ++E + D +Y+++I GL
Sbjct: 85 MKKSGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEAN 144
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A VL M + GC P+A YN I A + DA + EM SPN TYN
Sbjct: 145 LDRAVSVLNGMIKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPNIITYNT 204
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++NL ++ G P + L+K KVE ALQLWN + KG
Sbjct: 205 LINGLCKNEMFGEAYNLVKELLDKGLNPGVITYSMLMKGLCLDHKVEKALQLWNQVTSKG 264
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
F + + +VL LC +GK+ A + +M P+ VS LME K ++
Sbjct: 265 FKPDVQMHNVLIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHN---TLMEGFYKDGDIR 321
Query: 241 N 241
N
Sbjct: 322 N 322
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 93/181 (51%), Gaps = 3/181 (1%)
Query: 2 REMGV---KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLV 58
REMG P+I++YN LI+ CK+ +AY +V+++ D+ ++P VI+Y+ ++ GL L
Sbjct: 188 REMGTMHCSPNIITYNTLINGLCKNEMFGEAYNLVKELLDKGLNPGVITYSMLMKGLCLD 247
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
+ +KA + ++ G PD +N I C +++ A L +M +PN ++
Sbjct: 248 HKVEKALQLWNQVTSKGFKPDVQMHNVLIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSH 307
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
N FY D+R++ ++ R++ G P+ S +K ++ A+ +D V
Sbjct: 308 NTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGLCSCNRISDAILFLHDAVT 367
Query: 179 K 179
K
Sbjct: 368 K 368
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 94/204 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G KP+ YN LI+ + E A ++ +M SP++I+Y ++I GL
Sbjct: 155 MIKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPNIITYNTLINGLCKNEM 214
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A +++KE+ + G P Y+ ++ C+ ++ A L +++ KG P+ +N+
Sbjct: 215 FGEAYNLVKELLDKGLNPGVITYSMLMKGLCLDHKVEKALQLWNQVTSKGFKPDVQMHNV 274
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++ + +LY M C PN S L++ + + AL +W ++ G
Sbjct: 275 LIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNG 334
Query: 181 FGSYILVSDVLFDLLCDMGKLVEA 204
I+ ++ LC ++ +A
Sbjct: 335 LEPDIISYNITLKGLCSCNRISDA 358
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 109/245 (44%), Gaps = 1/245 (0%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E V PD V YN +++ Y + +++ +++ E M E + V S+ ++ GL G+ D
Sbjct: 18 ESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEG-NRSVSSFNIMMRGLFDNGKVD 76
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
+ + + MK+ G D+ Y + +C + + +++ +KG +A Y+
Sbjct: 77 EVISIWELMKKSGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMI 136
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
+L + ++ M+ +GC PN L+ K E A++++ +M
Sbjct: 137 NGLCKEANLDRAVSVLNGMIKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTMHCS 196
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNL 242
I+ + L + LC EA E+++KG P +++ + + L +K E L
Sbjct: 197 PNIITYNTLINGLCKNEMFGEAYNLVKELLDKGLNPGVITYSMLMKGLCLDHKVEKALQL 256
Query: 243 SNKMA 247
N++
Sbjct: 257 WNQVT 261
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 80/183 (43%), Gaps = 2/183 (1%)
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
G D A V KE+ E PDA YNA + Y +++D L + M +G + + +++
Sbjct: 4 GDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEG-NRSVSSF 62
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
N+ R + + + +++ M +G + ++ + LV + ++ +L + +
Sbjct: 63 NIMMRGLFDNGKVDEVISIWELMKKSGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQ 122
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP-SQVSFRRIKALMELANKQE 237
KG + + LC L A MI+ G KP + V I L+ + ++
Sbjct: 123 KGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNAHVYNTLINGLVGASKFED 182
Query: 238 ALQ 240
A++
Sbjct: 183 AIR 185
>gi|168049701|ref|XP_001777300.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671276|gb|EDQ57830.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 291
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 122/249 (48%), Gaps = 17/249 (6%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIG-----GLGLVGQ 60
VK D V YN L+ YCK QVE A ++ M+ +D PD+ +Y +I+ +GL
Sbjct: 41 VKKDTVLYNSLLHAYCKSGQVETANELFNSMKQKDCRPDLSTYNTIMNMYVKTDVGLT-- 98
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEK-GLSPNATTYN 119
K + KEM G PD +Y+ + + +++A + D M ++ G+ P TY
Sbjct: 99 --KVLSLFKEMCLQGIQPDVVSYDILLAACAPKQHVKEAQRIFDTMKKRRGIKPTVVTYT 156
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGT----GCLPNTQSCMFLVKLCKRQEKVEIALQLWND 175
V Y + + SS N C + G C PN ++ L+ C++ VE A ++
Sbjct: 157 SLITV-YANAGIYSSPNQLCPLFGEMVAEKCQPNVKTFTSLINSCRKGGHVEEAQTIFEA 215
Query: 176 MVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMEL--A 233
M E G ++ + L ++ + G+ A++ FL+M++ G +P+ VSF + + + A
Sbjct: 216 MKEYGVKPNVVTYNALINVYTERGEQDGAQRVFLQMVQSGLQPTGVSFTVLMSSFKATGA 275
Query: 234 NKQEALQNL 242
K+ + QNL
Sbjct: 276 FKEASFQNL 284
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 76/157 (48%), Gaps = 4/157 (2%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRD-EDISPDVISYTSII---GGLGLVGQ 60
G++PD+VSY+ L+ + V++A +I + M+ I P V++YTS+I G+
Sbjct: 111 GIQPDVVSYDILLAACAPKQHVKEAQRIFDTMKKRRGIKPTVVTYTSLITVYANAGIYSS 170
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
P++ + EM C P+ + + I + + +A + + M E G+ PN TYN
Sbjct: 171 PNQLCPLFGEMVAEKCQPNVKTFTSLINSCRKGGHVEEAQTIFEAMKEYGVKPNVVTYNA 230
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV 157
V+ + + ++ +M+ +G P S L+
Sbjct: 231 LINVYTERGEQDGAQRVFLQMVQSGLQPTGVSFTVLM 267
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 65/142 (45%), Gaps = 5/142 (3%)
Query: 2 REMGVKPDIVSYNCLIDVYCKD---RQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLV 58
+ G+KP +V+Y LI VY + + +M E P+V ++TS+I
Sbjct: 144 KRRGIKPTVVTYTSLITVYANAGIYSSPNQLCPLFGEMVAEKCQPNVKTFTSLINSCRKG 203
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
G ++A+ + + MKEYG P+ YNA I Y A + +MV+ GL P ++
Sbjct: 204 GHVEEAQTIFEAMKEYGVKPNVVTYNALINVYTERGEQDGAQRVFLQMVQSGLQPTGVSF 263
Query: 119 NLFFRVFYWSNDLR--SSWNLY 138
+ F + + S NL+
Sbjct: 264 TVLMSSFKATGAFKEASFQNLF 285
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 35/59 (59%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVG 59
M+E GVKP++V+YN LI+VY + + + A ++ +M + P +S+T ++ G
Sbjct: 216 MKEYGVKPNVVTYNALINVYTERGEQDGAQRVFLQMVQSGLQPTGVSFTVLMSSFKATG 274
>gi|225425882|ref|XP_002266563.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
mitochondrial [Vitis vinifera]
Length = 496
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 127/256 (49%), Gaps = 7/256 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G +P ++SY+ +I YC+ K Y++++ M+ + +P+V++YT+I+ L V Q
Sbjct: 241 MKGHGCRPCVISYSTIIQSYCRQSNFRKVYELLDDMQAQGCAPNVVTYTTIMCSLTKVEQ 300
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMD-EMVEKGLSPNATTYN 119
++A + + M+ GC PD YNA I A +LR+A + + EM + G+ PN +TYN
Sbjct: 301 FEEALQIAERMRSVGCKPDTLFYNALIHTLGRAGQLREAVRVFEVEMPKTGVPPNTSTYN 360
Query: 120 LFFRVFYWSNDLRSSWNLYCRM-MGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
+F + + + NL + T C P+ Q+ ++K C + K++ +DMV
Sbjct: 361 SMIAMFCHHSQEQKALNLLREIENSTFCKPDIQTYYPVLKSCFKTGKIDSLSNFLDDMVN 420
Query: 179 KGFGSY-ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQE 237
K S + +L LC K F EM+ K P + AL+ KQ+
Sbjct: 421 KHHLSLDVSAYTLLIHGLCRANKCEWGYNLFEEMVGKAITPRY----KTCALLLDEIKQK 476
Query: 238 ALQNLSNKMALFGPSM 253
+ + + ++ +F M
Sbjct: 477 NMHDAAERIEVFMKQM 492
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 69/139 (49%), Gaps = 1/139 (0%)
Query: 12 SYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEM 71
S N L+D CK+R+VE+A I +++ ISP+ ++ I G + D+A ++EM
Sbjct: 183 SMNLLLDTLCKERKVEQARAIFLELKPH-ISPNTHTFNIFIHGWCKANRVDEAEWTIQEM 241
Query: 72 KEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDL 131
K +GC P +Y+ I++YC R L+D+M +G +PN TY
Sbjct: 242 KGHGCRPCVISYSTIIQSYCRQSNFRKVYELLDDMQAQGCAPNVVTYTTIMCSLTKVEQF 301
Query: 132 RSSWNLYCRMMGTGCLPNT 150
+ + RM GC P+T
Sbjct: 302 EEALQIAERMRSVGCKPDT 320
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 98/217 (45%), Gaps = 2/217 (0%)
Query: 27 EKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAA 86
E A ++ + + + ++ + S ++ L + ++AR + E+K + P+ +N
Sbjct: 163 EDAVRVFDDLGNFELEKNTESMNLLLDTLCKERKVEQARAIFLELKPH-ISPNTHTFNIF 221
Query: 87 IRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGC 146
I +C A R+ +A + EM G P +Y+ + + ++ R + L M GC
Sbjct: 222 IHGWCKANRVDEAEWTIQEMKGHGCRPCVISYSTIIQSYCRQSNFRKVYELLDDMQAQGC 281
Query: 147 LPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEK 206
PN + ++ + E+ E ALQ+ M G L + L L G+L EA +
Sbjct: 282 APNVVTYTTIMCSLTKVEQFEEALQIAERMRSVGCKPDTLFYNALIHTLGRAGQLREAVR 341
Query: 207 SF-LEMIEKGHKPSQVSFRRIKALMELANKQEALQNL 242
F +EM + G P+ ++ + A+ ++++ NL
Sbjct: 342 VFEVEMPKTGVPPNTSTYNSMIAMFCHHSQEQKALNL 378
>gi|413949009|gb|AFW81658.1| hypothetical protein ZEAMMB73_233967 [Zea mays]
Length = 637
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 120/253 (47%), Gaps = 5/253 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+KPD+V +N +I+ + ++ +A K+ E M+ + P+V +YT +I G+
Sbjct: 355 MLEKGMKPDVVVHNTMIEGLLRGQRQHEAVKMFELMKAKGPPPNVWTYTMLICNHCKRGK 414
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A + +EM+E C PD A Y + Y AKR+ + +++EM +KG P+A TYN
Sbjct: 415 MDMAMECFEEMQEARCQPDVATYTCLLVGYGNAKRMDRVTAVLEEMTQKGCPPDARTYNA 474
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK---LCKRQEKVEIALQLWNDMV 177
++ + +Y +M+ G P + ++K L R + A +W +M
Sbjct: 475 LIKLLTNRKMPDDAARIYKKMIKKGLDPTIHTYNMMMKSYFLGDRNYAMGCA--VWEEMH 532
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQE 237
+G + V G+ EA K EMI KG K Q+ + A + A K +
Sbjct: 533 RRGICPDVNSYTVFISGHIRHGRPEEAYKYIEEMINKGMKAPQIDCNKFAADLSKAGKLD 592
Query: 238 ALQNLSNKMALFG 250
L L+ K+ G
Sbjct: 593 MLYELAQKVKFAG 605
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 83/176 (47%), Gaps = 4/176 (2%)
Query: 45 VISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMD 104
I+Y ++ LG Q + +L+EM + G A+ AI+++ A +++A G+ +
Sbjct: 226 TITYCKMLLILGKTRQFESMVALLQEMGKAGTL-SMDAFKVAIKSFAAAGEIKNAVGVFE 284
Query: 105 EMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQ 163
M + G ++N R + ++ +M+G P+ +S ++ C +
Sbjct: 285 LMRKNGFDDGVESFNCLLVALANEGLGREARQVFDKMLGQYS-PDLRSYTALMLAWCNAR 343
Query: 164 EKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
VE A ++WN+M+EKG ++V + + + L + EA K F M KG P+
Sbjct: 344 NLVE-AGRVWNEMLEKGMKPDVVVHNTMIEGLLRGQRQHEAVKMFELMKAKGPPPN 398
>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 108/212 (50%), Gaps = 2/212 (0%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ P++ +YN L+D CK+ +V++A ++ M + PDVI+Y++++ G LV + KA+
Sbjct: 265 INPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQ 324
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
V M G PD +Y I +C K + +A L EM +K + P TY+
Sbjct: 325 HVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGL 384
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSY 184
S + W+L M G N + L+ LCK ++ A+ L+N M ++G
Sbjct: 385 CKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGH-LDRAIALFNKMKDQGIRPC 443
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGH 216
+L D LC G+L +A+++F +++ KG+
Sbjct: 444 SFTFTILLDGLCKGGRLKDAQEAFQDLLTKGY 475
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 108/221 (48%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
VKPD+++Y+ L+D Y +++KA + M ++PDV SYT +I G D+A
Sbjct: 300 VKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEAL 359
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
++ KEM + P Y++ I C + R+ L+DEM ++G+ N TYN
Sbjct: 360 NLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGL 419
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ L + L+ +M G P + + L+ + +++ A + + D++ KG+ +
Sbjct: 420 CKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDV 479
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+V+ + C G L EA +M E G P+ V+F I
Sbjct: 480 YKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDII 520
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 114/256 (44%), Gaps = 2/256 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G++PD+++ N LI+ +C Q+ + ++ K+ P I++T++I GL L GQ +KA
Sbjct: 89 GIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKA 148
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++ G D +Y I C R A L+ ++ + PN YN
Sbjct: 149 LHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDA 208
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ ++ L+ M G + + L+ K++ A+ L N+MV K
Sbjct: 209 LCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPN 268
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSN 244
+ ++L D LC GK+ EA+ M++ KP +++ + L + + Q++ N
Sbjct: 269 VYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFN 328
Query: 245 KMALFGPSMIPKREEY 260
M+L G + P Y
Sbjct: 329 AMSLMGVT--PDVHSY 342
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 109/221 (49%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
KP++ YN +ID CK + V +AY + +M + IS DV++YT++I G + + +A
Sbjct: 195 TKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAI 254
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+L EM P+ YN + C ++++A ++ M++ + P+ TY+ +
Sbjct: 255 GLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGY 314
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ +L+ + +++ M G P+ S L+ + + V+ AL L+ +M +K I
Sbjct: 315 FLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGI 374
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ L D LC G++ EM ++G + +++ +
Sbjct: 375 VTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSL 415
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 89/181 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + + P IV+Y+ LID CK ++ + ++++MRD I +VI+Y S+I GL G
Sbjct: 365 MHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGH 424
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + +MK+ G P + + + C RL+DA +++ KG + YN+
Sbjct: 425 LDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNV 484
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
L + + +M GC+PN + ++ ++++ + A +L M+ +G
Sbjct: 485 MINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQMICRG 544
Query: 181 F 181
Sbjct: 545 L 545
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 78/147 (53%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G+ ++++YN LID CK+ +++A + KM+D+ I P ++T ++ GL G+
Sbjct: 400 MRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGR 459
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A++ +++ G + D YN I +C L +A ++ +M E G PNA T+++
Sbjct: 460 LKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDI 519
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCL 147
+ ++ + L +M+ G L
Sbjct: 520 IINALFKKDENDKAEKLLRQMICRGLL 546
>gi|302771513|ref|XP_002969175.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
gi|300163680|gb|EFJ30291.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
Length = 399
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 111/229 (48%), Gaps = 4/229 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDE-DISPDVISYTSIIGGLGLVG 59
M+ M PD +YN +I +CK ++++AY +E+M+ SPD +Y+ +I GL
Sbjct: 147 MQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSS 206
Query: 60 QPDKARDVLKEM-KEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
KA ++L+EM C A+N + YC A+ L A L+ M+E G +P+ TY
Sbjct: 207 NLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTY 266
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMV 177
+ D+ + L +M+ GC P+ + LV LCK + VE A +L M+
Sbjct: 267 STIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVE-ACRLVKRML 325
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
E G + ++FD LC + KL A + +KG V+F +
Sbjct: 326 EDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRVTDVVAFETL 374
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 120/262 (45%), Gaps = 40/262 (15%)
Query: 1 MREM----GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLG 56
+REM G+ P YN + CK +V +A ++V+ M+D PDV+++ ++I GL
Sbjct: 41 LREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVVTFNTLIAGLC 100
Query: 57 LVGQPDKARDVLKEMKEYG--------------------------------CYPDAAAYN 84
G+ D+A+ VL EM+ G PD YN
Sbjct: 101 KAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLVMQGMTTTPDTQTYN 160
Query: 85 AAIRNYCIAKRLRDASGLMDEMVEK-GLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMG 143
A I +C + + A G ++EM ++ G SP+ TY++ S++LR + L M+G
Sbjct: 161 AIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIG 220
Query: 144 -TGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKL 201
C + + LV CK Q+ ++ A +L + M+E G ++ + D LC G +
Sbjct: 221 RKDCCASVVAFNTLVDGYCKAQD-LDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDV 279
Query: 202 VEAEKSFLEMIEKGHKPSQVSF 223
+ +M+ +G KP V++
Sbjct: 280 DKGFALLEKMVSRGCKPDVVTY 301
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 56/98 (57%), Gaps = 2/98 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G KPD+V+Y L+ CK ++ +A ++V++M ++ +P+ ++Y+ + GL + +
Sbjct: 289 MVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDK 348
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRD 98
D A D+L +++ G D A+ + + + KRL D
Sbjct: 349 LDMANDLLTSIRDKGRVTDVVAFETLLLS--VKKRLLD 384
>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
Length = 543
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 109/219 (49%), Gaps = 2/219 (0%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
V+P++V+YN LI YCK A++++E+M PDV+++ S+I G + DKA
Sbjct: 239 VRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKAC 298
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+VL MK+ C P+ YN I C A R +A L+ EM +G+ P+ TYN +F
Sbjct: 299 EVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIF 358
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + ++ + M+ G +P+ S C V L K E+ + A L ++M + G
Sbjct: 359 CRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLK-SERFDEAFALLDNMFDAGAIPN 417
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + L + LC +L EA M G P+ ++
Sbjct: 418 LFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTY 456
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 98/181 (54%), Gaps = 2/181 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+ PD+V+YN LID CK ++E+A +++E M + P++++Y ++I G G
Sbjct: 199 MSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGC 258
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGL-SPNATTYN 119
A +++ M + G +PD +N+ I +C ++ A ++ +++KGL +PN TYN
Sbjct: 259 TGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVL-HLMKKGLCAPNLVTYN 317
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ + + L M G G LP+ + L+ + R ++E A Q+ N MVE+
Sbjct: 318 VLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVER 377
Query: 180 G 180
G
Sbjct: 378 G 378
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 117/227 (51%), Gaps = 4/227 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E G PD+V+++ ++ C + +A + + + +PD + + ++ GL Q
Sbjct: 131 MKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRE--SVECAPDSVLFNILVHGLCKANQ 188
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR +++EM E G PD YN+ I C + R+ +A L++ MV++ + PN TYN
Sbjct: 189 LSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNT 248
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + L RM+ +G P+ + L+ ++ K++ A ++ + +++KG
Sbjct: 249 LIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLH-LMKKG 307
Query: 181 FGSYILVS-DVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ LV+ +VL LCD G+ EA + EM +G P +++ +
Sbjct: 308 LCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSL 354
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 115/237 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G PD+V++N LI +C+ +++KA +++ M+ +P++++Y +I GL G+
Sbjct: 269 MIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGR 328
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A ++L EM G PD YN+ I +C ++ A + + MVE+G+ P+ +Y
Sbjct: 329 ANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCT 388
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
S ++ L M G +PN + L++ +++ A L M G
Sbjct: 389 LAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVG 448
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQE 237
+VL LC G++ +A++ + M+ +G +P S I + KQ+
Sbjct: 449 CDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREGKQD 505
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 118/250 (47%), Gaps = 6/250 (2%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD V +N L+ CK Q+ +A +++E+M + I PDV++Y S+I GL + ++AR +
Sbjct: 171 PDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQL 230
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L+ M + P+ YN I YC A L++ M++ G P+ T+N F
Sbjct: 231 LETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQ 290
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+ + + + M C PN + L+ LC E A +L ++M +G I+
Sbjct: 291 KSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANE-ACELLSEMDGRGILPDII 349
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIK-ALMELANKQEALQNLSNK 245
+ L + C ++ +A + M+E+G P +S+ + AL++ EA L N
Sbjct: 350 TYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDN- 408
Query: 246 MALFGPSMIP 255
+F IP
Sbjct: 409 --MFDAGAIP 416
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 99/220 (45%), Gaps = 2/220 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P++V+YN LI C + +A +++ +M I PD+I+Y S+IG Q ++A +
Sbjct: 311 PNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQI 370
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
M E G PD +Y ++R +A L+D M + G PN T+N
Sbjct: 371 QNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCC 430
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYIL 186
S L + +L M GC P + LV LCK +V+ A ++ MV +G +
Sbjct: 431 SRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCK-AGRVDDAKEVLVMMVSEGIQPLVS 489
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
S + L GK A F +++ K S++++
Sbjct: 490 SSGTIVHTLAREGKQDLALHYFDQVVAAESKACDPSYQKL 529
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 90/214 (42%), Gaps = 38/214 (17%)
Query: 14 NCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKE 73
NCL+ K R+ +AY+I RDE L+GQ
Sbjct: 73 NCLLRTLVKARRHHQAYQI---FRDE-----------------LLGQH------------ 100
Query: 74 YGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRS 133
C + YN I +C A + A L+ EM E+G SP+ T++ + + +L
Sbjct: 101 --CDTNHITYNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSR 158
Query: 134 SWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLF 192
+ + C P++ LV LCK + E A Q+ +M E+G ++ + L
Sbjct: 159 AMQYF--RESVECAPDSVLFNILVHGLCKANQLSE-ARQMIEEMSERGIVPDVVTYNSLI 215
Query: 193 DLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
D LC ++ EA + M+++ +P+ V++ +
Sbjct: 216 DGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTL 249
>gi|125551971|gb|EAY97680.1| hypothetical protein OsI_19602 [Oryza sativa Indica Group]
Length = 586
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 114/231 (49%), Gaps = 5/231 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+KPD+V +N +I+ + ++ +A K+ E M+ + +P+V +YT +I G+
Sbjct: 350 MLENGLKPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPAPNVWTYTMLIRDHCKRGK 409
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A +EM++ GC PD A Y + Y AKR+ + L++EM +KG P+ TYN
Sbjct: 410 MDMAMRCFEEMQDVGCQPDVATYTCLLVGYGNAKRMDRVTALLEEMTQKGCPPDGRTYNA 469
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK---LCKRQEKVEIALQLWNDMV 177
++ N + +Y +M+ G P + ++K L R + A +W +M
Sbjct: 470 LIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFLGGRNYMMGCA--VWEEMH 527
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKA 228
KG + V + G+ EA K EMI+KG K Q+ + + A
Sbjct: 528 RKGICPDVNSYTVFINGHIRHGRPEEACKYIEEMIQKGMKTPQIDYNKFAA 578
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 102/222 (45%), Gaps = 7/222 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G + S+NCL+ ++ +A ++ ++MRD +PD+ SYT+++
Sbjct: 281 MRTHGFDDGVESFNCLLVALAQEGLGREANQVFDRMRDR-YAPDLRSYTALMLAWCNARN 339
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A V EM E G PD +N I +R +A + + M KG +PN TY +
Sbjct: 340 LVEAGRVWNEMLENGLKPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPAPNVWTYTM 399
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPN--TQSCMFL-VKLCKRQEKVEIALQLWNDMV 177
R + + + M GC P+ T +C+ + KR ++V L+ +M
Sbjct: 400 LIRDHCKRGKMDMAMRCFEEMQDVGCQPDVATYTCLLVGYGNAKRMDRVTALLE---EMT 456
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
+KG + L LL + +A + + +MI+KG +P+
Sbjct: 457 QKGCPPDGRTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPT 498
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 80/180 (44%), Gaps = 4/180 (2%)
Query: 45 VISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMD 104
I+Y ++ LG Q +++EM + G A+ AI+++ A +++A G+ +
Sbjct: 221 TITYCKMVHILGKARQFQSMVALIQEMGKEGALC-MDAFKIAIKSFAAAGEIKNAVGVFE 279
Query: 105 EMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQ 163
M G ++N R + ++ RM P+ +S ++ C +
Sbjct: 280 MMRTHGFDDGVESFNCLLVALAQEGLGREANQVFDRMRDR-YAPDLRSYTALMLAWCNAR 338
Query: 164 EKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
VE A ++WN+M+E G ++V + + + L + EA K F M KG P+ ++
Sbjct: 339 NLVE-AGRVWNEMLENGLKPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPAPNVWTY 397
>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
Length = 645
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 102/200 (51%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
D V++N L+D C++ V++ +++E+M + PDVI+YT++I G G D+A +L
Sbjct: 356 DDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLL 415
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
+ M GC P+ +Y ++ C A+R DA LM +M+++G PN T+N
Sbjct: 416 RSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKK 475
Query: 129 NDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVS 188
+ + L +M+ GC P+ S ++ + + AL+L N MV+KG ++
Sbjct: 476 GLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIY 535
Query: 189 DVLFDLLCDMGKLVEAEKSF 208
+ L G++ + + F
Sbjct: 536 SSIASALSGEGRINKVIQMF 555
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 121/280 (43%), Gaps = 38/280 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P+IV+++ LI C++ E+ +++ +M + +PDV Y +II G+ +
Sbjct: 243 MVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEER 302
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEM-------------- 106
+ AR +L M YG P+ YN ++ C A R +A GL+ EM
Sbjct: 303 LEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNI 362
Query: 107 ---------------------VEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
+E G P+ TY F + + L M G
Sbjct: 363 LVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACG 422
Query: 146 CLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEA 204
C PNT S ++K LC + V+ A +L + M+++G + + L + LC G + +A
Sbjct: 423 CRPNTVSYTIVLKGLCSAERWVD-AEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQA 481
Query: 205 EKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLS 243
+ +M+ G P +S+ I L + N EAL+ L+
Sbjct: 482 IELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLN 521
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 102/223 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+ G +PD+VSYN ++ C R+ ++E+M P++++++++IG L G
Sbjct: 208 LPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGL 267
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++ +V +M E+GC PD Y I C +RL A G+++ M GLSPN YN
Sbjct: 268 FERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNT 327
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ + L M C + + LV + V+ +++ M+E G
Sbjct: 328 LLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHG 387
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + + C G + EA M G +P+ VS+
Sbjct: 388 CMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSY 430
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 113/265 (42%), Gaps = 35/265 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGL----- 55
M E G PD+ Y +ID CK+ ++E A I+ +M +SP+V+ Y +++ GL
Sbjct: 278 MAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADR 337
Query: 56 -----GLV-------------------------GQPDKARDVLKEMKEYGCYPDAAAYNA 85
GL+ G D+ +VL++M E+GC PD Y
Sbjct: 338 WEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTT 397
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
I +C + +A L+ M G PN +Y + + + + L +M+ G
Sbjct: 398 VINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQG 457
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
C PN + L+ ++ VE A++L M+ G ++ + D L G EA
Sbjct: 458 CPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEAL 517
Query: 206 KSFLEMIEKGHKPSQVSFRRIKALM 230
+ M++KG P+ + + I + +
Sbjct: 518 ELLNVMVKKGMSPNTIIYSSIASAL 542
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 98/224 (43%), Gaps = 1/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P Y+ ++ C+ A ++ + + DV + ++ + G
Sbjct: 137 MARRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGP 196
Query: 61 PDKARDVLKEM-KEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
D+A +L+++ +GC PD +YNA +R C+A+R LM+EMV G PN T++
Sbjct: 197 VDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFS 256
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ ++ +M GC P+ + ++ ++E++E+A + N M
Sbjct: 257 TLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSY 316
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G ++ + L LC + EAE EM +K V+F
Sbjct: 317 GLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTF 360
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 88/180 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G P+ V++N LI+ CK VE+A +++++M SPD+ISY+++I GLG G
Sbjct: 453 MIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGN 512
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A ++L M + G P+ Y++ R+ + + + + + +A YN
Sbjct: 513 TDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNA 572
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + M+ +GC+PN + L++ + V+ A ++ ++ KG
Sbjct: 573 VISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEILTELCSKG 632
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 104/247 (42%), Gaps = 16/247 (6%)
Query: 13 YNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMK 72
YN ++ YC+ Q+ A ++ + ++P+ +Y ++ L G+ A VL +M
Sbjct: 82 YNAMVAGYCRAGQLAAARRLAASV---PVAPNAYTYFPLVRALCARGRIADALAVLDDMA 138
Query: 73 EYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLR 132
GC P Y+ + C A R A G++ ++ +G + + NL + +
Sbjct: 139 RRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVD 198
Query: 133 SSWNLYCRMMGT-GCLPNTQSCMFLVK-LC--KRQEKVEIALQLWNDMVEKGFGSYILVS 188
+ L ++ + GC P+ S +++ LC +R V+ L +MV G I+
Sbjct: 199 EAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQ---DLMEEMVAAGCPPNIVTF 255
Query: 189 DVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ---NLSNK 245
L LC G + +M E G P R +++ K+E L+ + N+
Sbjct: 256 STLIGHLCRNGLFERVHEVHAQMAEHGCAP---DVRMYATIIDGVCKEERLEVARGILNR 312
Query: 246 MALFGPS 252
M +G S
Sbjct: 313 MPSYGLS 319
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/242 (19%), Positives = 91/242 (37%), Gaps = 1/242 (0%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
V P+ +Y L+ C ++ A +++ M +P Y + A
Sbjct: 107 VAPNAYTYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAV 166
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEK-GLSPNATTYNLFFRV 124
VL+++ GC D N ++ C + +A L+ +++ G P+ +YN R
Sbjct: 167 GVLRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRG 226
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ +L M+ GC PN + L+ R E ++ M E G
Sbjct: 227 LCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPD 286
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSN 244
+ + + D +C +L A M G P+ V + + + A++ E + L
Sbjct: 287 VRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLA 346
Query: 245 KM 246
+M
Sbjct: 347 EM 348
>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 545
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 126/244 (51%), Gaps = 4/244 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
++P++V Y+ +ID CKD V++AY + +M + ISPDV++Y+ ++ G +VGQ ++A
Sbjct: 193 SIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRA 252
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
D+L EM PD Y + C ++++A ++ MV+ ++ + Y+
Sbjct: 253 IDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDG 312
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGS 183
+ N++ ++ ++ M G P+ ++ LCK + +V+ AL L+ ++ +K
Sbjct: 313 YCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIK-RVDEALNLFEEIHQKNMVP 371
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNL 242
+ L D LC G++ F EM+++G P +++ I AL + + A+ L
Sbjct: 372 DTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIA-L 430
Query: 243 SNKM 246
NKM
Sbjct: 431 FNKM 434
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 107/212 (50%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
+ PDI +Y L+D CK+ +V++A ++ M ++ DV+ Y++++ G LV + + A
Sbjct: 263 NINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNA 322
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ V M + G PD Y+ I C KR+ +A L +E+ +K + P+ TY
Sbjct: 323 KRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDC 382
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
S + W+L+ M+ G P+ + L+ + ++ A+ L+N M ++
Sbjct: 383 LCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPN 442
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGH 216
+ +L D LC +G+L A + F +++ KG+
Sbjct: 443 VYTFTILLDGLCKVGRLKNALEFFQDLLTKGY 474
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 105/223 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + V D+V Y+ L+D YC +V A ++ M ++PDV Y+ +I GL + +
Sbjct: 294 MVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKR 353
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A ++ +E+ + PD Y + I C + R+ L DEM+++G P+ TYN
Sbjct: 354 VDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNN 413
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L + L+ +M PN + L+ + +++ AL+ + D++ KG
Sbjct: 414 LIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKG 473
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + V+ + LC G L EA M + G V+F
Sbjct: 474 YCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVTF 516
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 106/215 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +MGV PD+ Y+ +I+ CK ++V++A + E++ +++ PD ++YTS+I L G+
Sbjct: 329 MTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGR 388
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+ EM + G PD YN I C L A L ++M ++ + PN T+ +
Sbjct: 389 ISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTI 448
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
L+++ + ++ G N ++ ++ ++ ++ AL L + M + G
Sbjct: 449 LLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNG 508
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
S + +++ D + +AEK EMI +G
Sbjct: 509 CISDAVTFEIMIRAFFDKDENDKAEKLVREMIARG 543
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 110/239 (46%), Gaps = 1/239 (0%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
++G +P+ ++ N L+ C + +V++A + +K+ + ISY +I G+ +G+
Sbjct: 121 KLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIGETR 180
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
A +L+ ++ + P+ Y+ I C + +A L EMV KG+SP+ TY++
Sbjct: 181 AAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILV 240
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
F L + +L M+ P+ + LV ++ KV+ A + MV+
Sbjct: 241 SGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVN 300
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEALQ 240
++V L D C + ++ A++ F M + G P + I L ++ EAL
Sbjct: 301 LDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALN 359
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 73/147 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G PD+++YN LID CK+ +++A + KM+D+ I P+V ++T ++ GL VG+
Sbjct: 399 MLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGR 458
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A + +++ G + Y I C L +A L M + G +A T+ +
Sbjct: 459 LKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVTFEI 518
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCL 147
R F+ ++ + L M+ G L
Sbjct: 519 MIRAFFDKDENDKAEKLVREMIARGLL 545
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 90/208 (43%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
V+PD + N +I+ +C QV A+ V K+ P+ I+ +++ GL L G+ +A
Sbjct: 89 VEPDYFTLNIIINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEAL 148
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
++ G +Y I C R A L+ + + PN Y++
Sbjct: 149 RFHDKVLAQGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRL 208
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ +++LY M+G G P+ + LV ++ A+ L N+MV + I
Sbjct: 209 CKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDI 268
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIE 213
+L D LC GK+ EAE M++
Sbjct: 269 YTYTILVDALCKEGKVKEAENVLAVMVK 296
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/224 (19%), Positives = 93/224 (41%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + P +N ++ ++ A + ++M ++ PD + II GQ
Sbjct: 49 MFHVHPTPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNIIINCFCHFGQ 108
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A + ++ + G P+ N ++ C+ ++++A D+++ +G + +Y +
Sbjct: 109 VVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGI 168
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQ-SCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ R++ L R+ PN M + +LCK V+ A L+ +MV K
Sbjct: 169 LINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCK-DTLVDEAYDLYTEMVGK 227
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G ++ +L C +G+L A EM+ + P ++
Sbjct: 228 GISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTY 271
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 40/208 (19%), Positives = 85/208 (40%), Gaps = 2/208 (0%)
Query: 42 SPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASG 101
+P + I+ L V + A + K+M+ PD N I +C ++ A
Sbjct: 55 TPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNIIINCFCHFGQVVLAFS 114
Query: 102 LMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGC-LPNTQSCMFLVKLC 160
+ ++++ G PN T N + ++ + + +++ G L + + +C
Sbjct: 115 GVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVC 174
Query: 161 KRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQ 220
K E A++L + +++ ++ D LC + EA + EM+ KG P
Sbjct: 175 KIGE-TRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDV 233
Query: 221 VSFRRIKALMELANKQEALQNLSNKMAL 248
V++ + + + + +L N+M L
Sbjct: 234 VTYSILVSGFCIVGQLNRAIDLLNEMVL 261
>gi|302816300|ref|XP_002989829.1| hypothetical protein SELMODRAFT_42426 [Selaginella moellendorffii]
gi|300142395|gb|EFJ09096.1| hypothetical protein SELMODRAFT_42426 [Selaginella moellendorffii]
Length = 331
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 111/219 (50%), Gaps = 3/219 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E PD+ YN +I+ + Q+ AY + E+M + + P+ +++ ++ G G
Sbjct: 115 MNEESFLPDVGIYNRIIEAM-SELQLHGAYLLFEQMIEAGVLPNSATFSFLVRGCFKRGF 173
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+ ++L++M E GC P+ A +NA I C +R+ +A +M+EM +G SP+A T+
Sbjct: 174 LDEGSELLRQMVESGCVPELATFNAVIEGLCKVRRVENARWVMNEMASQGCSPDAATHRF 233
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEK 179
+ L + RM+ TGCLP+T + FL+ KLCK +E A + + +M+
Sbjct: 234 LLEALCKMDKLDEAHRHVQRMIATGCLPDTVTYSFLIKKLCKEGRPME-AHRFFKEMIGI 292
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
G + ++L C K + F +M E+G P
Sbjct: 293 GREPDSSIYNLLLASHCAASKATACYELFTQMKERGVLP 331
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 108/227 (47%), Gaps = 10/227 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKA---YKIVEKMRDEDISPDVISYTSIIGGLGL 57
M +MG D+ +N +I + ++V+ A + +EK RD D+ SY+ ++ L
Sbjct: 46 MEKMGFHIDVGLHNAIIRGLIRAKRVDDALDHFAKMEKNRDTDLE----SYSIVVSALCD 101
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
+ DKA D+L M E PD YN I +L A L ++M+E G+ PN+ T
Sbjct: 102 EKRVDKAVDLLYSMNEESFLPDVGIYNRIIEAMS-ELQLHGAYLLFEQMIEAGVLPNSAT 160
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDM 176
++ R + L L +M+ +GC+P + +++ LCK + +VE A + N+M
Sbjct: 161 FSFLVRGCFKRGFLDEGSELLRQMVESGCVPELATFNAVIEGLCKVR-RVENARWVMNEM 219
Query: 177 VEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+G L + LC M KL EA + MI G P V++
Sbjct: 220 ASQGCSPDAATHRFLLEALCKMDKLDEAHRHVQRMIATGCLPDTVTY 266
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 109/238 (45%), Gaps = 3/238 (1%)
Query: 11 VSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKE 70
++Y +++ YC ++ A +I+ +M DV + +II GL + D A D +
Sbjct: 21 IAYKTMVEGYCYVGDMDPATRILAQMEKMGFHIDVGLHNAIIRGLIRAKRVDDALDHFAK 80
Query: 71 MKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSND 130
M E D +Y+ + C KR+ A L+ M E+ P+ YN
Sbjct: 81 M-EKNRDTDLESYSIVVSALCDEKRVDKAVDLLYSMNEESFLPDVGIYNRIIEAMS-ELQ 138
Query: 131 LRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDV 190
L ++ L+ +M+ G LPN+ + FLV+ C ++ ++ +L MVE G + +
Sbjct: 139 LHGAYLLFEQMIEAGVLPNSATFSFLVRGCFKRGFLDEGSELLRQMVESGCVPELATFNA 198
Query: 191 LFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEALQNLSNKMA 247
+ + LC + ++ A EM +G P + R ++AL ++ EA +++ +A
Sbjct: 199 VIEGLCKVRRVENARWVMNEMASQGCSPDAATHRFLLEALCKMDKLDEAHRHVQRMIA 256
>gi|356522850|ref|XP_003530056.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Glycine max]
Length = 545
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 98/184 (53%), Gaps = 5/184 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + + P+ V+YN LID CK ++ A+ ++++M D +VI+Y S+I GL GQ
Sbjct: 361 MHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQ 420
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRN-YCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
DKA ++ +MK+ G PD N + C KRL++A GL ++++KG PN TYN
Sbjct: 421 LDKAIALINKMKDQGIQPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYN 480
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEI--ALQLWNDMV 177
+ L ++ L +M +GC PN + F + +C EK E A +L +M+
Sbjct: 481 IIIYGHCKEGLLDEAYALQSKMEDSGCSPN--AITFKIIICALLEKGETDKAEKLLCEMI 538
Query: 178 EKGF 181
+G
Sbjct: 539 ARGL 542
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 112/213 (52%), Gaps = 1/213 (0%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
MGV PD+ SYN +I+ CK ++VE+A + ++M +++ P+ ++Y S+I GL G+
Sbjct: 329 MGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISY 388
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
A D++ EM + G + + YN+ I C +L A L+++M ++G+ P+ T N+
Sbjct: 389 AWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLH 448
Query: 124 -VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
+ L+++ L+ ++ G PN + ++ ++ ++ A L + M + G
Sbjct: 449 GLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCS 508
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
+ ++ L + G+ +AEK EMI +G
Sbjct: 509 PNAITFKIIICALLEKGETDKAEKLLCEMIARG 541
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 108/224 (48%), Gaps = 11/224 (4%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
+ PD+ YN L+D K+ +V++A ++ + + P+VI+Y ++I G A
Sbjct: 268 AINPDVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGY--------A 319
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ V + G PD +YN I C KR+ +A L EM +K + PN TYN
Sbjct: 320 KHVFNAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDG 379
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGS 183
S + +W+L M G N + L+ LCK + ++ A+ L N M ++G
Sbjct: 380 LCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQ-LDKAIALINKMKDQGIQP 438
Query: 184 YILVSDVLFD-LLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ ++L LLC +L A+ F ++++KG+ P+ ++ I
Sbjct: 439 DMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNII 482
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 110/222 (49%), Gaps = 10/222 (4%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+P++V YN +ID CK + V +A + +M + IS +V++Y++II G +VG+ +A
Sbjct: 199 TEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEAL 258
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
L EM PD YN + ++++A ++ +V+ L PN TYN +
Sbjct: 259 GFLNEMVLKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGY 318
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ +N M G P+ S ++ +LCK + +VE AL L+ +M +K
Sbjct: 319 -----AKHVFNAVGLM---GVTPDVWSYNIMINRLCKIK-RVEEALNLYKEMHQKNMVPN 369
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + L D LC G++ A EM ++GH + +++ +
Sbjct: 370 TVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSL 411
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 78/148 (52%), Gaps = 1/148 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G ++++YN LI+ CK+ Q++KA ++ KM+D+ I PD+ + ++ GL G+
Sbjct: 396 MHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLCKGK 455
Query: 61 PDK-ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
K A+ + +++ + G +P+ YN I +C L +A L +M + G SPNA T+
Sbjct: 456 RLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSPNAITFK 515
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCL 147
+ + + L C M+ G L
Sbjct: 516 IIICALLEKGETDKAEKLLCEMIARGLL 543
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 94/222 (42%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
++PD + N LI+ +C Q+ A+ ++ K+ PD ++ T++I GL L GQ KA
Sbjct: 93 AIQPDFFTLNILINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKA 152
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++ G D +Y I C R A L+ + + PN YN
Sbjct: 153 LHFHDKLLAQGFRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDC 212
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + NL+ M G N + ++ K+ AL N+MV K
Sbjct: 213 LCKRKLVSEACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPD 272
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + + L D L GK+ EA+ +++ KP+ +++ +
Sbjct: 273 VYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTL 314
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 107/243 (44%), Gaps = 5/243 (2%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P I+ +N ++D + K + + ++ + I PD + +I +GQ + A V
Sbjct: 61 PPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNILINCFCHLGQINLAFSV 120
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L ++ ++G PD I+ C+ +++ A D+++ +G + +Y
Sbjct: 121 LSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVSYGTLINGVCK 180
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+ R++ L R+ G PN ++ LCKR+ E A L+++M KG + ++
Sbjct: 181 IGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSE-ACNLFSEMSVKGISANVV 239
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKM 246
+ C +GKL EA EM+ K P + L++ +K+ ++ N +
Sbjct: 240 TYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYN---TLVDALHKEGKVKEAKNVL 296
Query: 247 ALF 249
A+
Sbjct: 297 AVI 299
>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 676
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 114/248 (45%), Gaps = 29/248 (11%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P+ +YN LID CK+R+V++A ++E M + + V +YT +I + G D A +
Sbjct: 317 PNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRI 376
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L +M G PD Y A I +C +++A +M M E+G+ P+A TY L +
Sbjct: 377 LDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGG 436
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQE----------------------- 164
L ++++ RM TGC P+ + L+K ++E
Sbjct: 437 LGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVA 496
Query: 165 ------KVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
K E AL+L+ M+E G I L LC +G+L A+K F M E+G P
Sbjct: 497 DVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSP 556
Query: 219 SQVSFRRI 226
S+ + +
Sbjct: 557 SEAIYNSL 564
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 111/239 (46%), Gaps = 1/239 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M P+ +YN LI +C+ + V +A ++ KM + ++P V++Y S+I G +G
Sbjct: 170 MHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGY 229
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A +L M E G PD Y+ I C R+ +A+ L + + EKG+ N Y
Sbjct: 230 LDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTA 289
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + + +L RM+ CLPN+ + L+ ++ KV+ AL L M++KG
Sbjct: 290 LIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKG 349
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEA 238
+ +L + G A + +M+ G++P + I A N +EA
Sbjct: 350 LKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEA 408
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 108/223 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G + + VSY LI C+ +V++ I +KMR++D P V +YT I+ L G+
Sbjct: 30 MPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVIVHALFESGR 89
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++ EM+E GC P+ Y I C +L + ++DEMVEKGL P+ TYN
Sbjct: 90 RMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNA 149
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + ++ + M C PN ++ L+ R++ V A+ L + M+E
Sbjct: 150 LIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESR 209
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + L C +G L A + M E G P Q ++
Sbjct: 210 LTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTY 252
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 105/224 (46%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E GV PD +Y+ ID CK ++E+A + ++++ I + + YT++I G G+
Sbjct: 240 MNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGK 299
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A +L M C P+++ YNA I C +++++A LM+ M++KGL TY +
Sbjct: 300 MDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTI 359
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQ-SCMFLVKLCKRQEKVEIALQLWNDMVEK 179
D + + +M+ +G P+ F+ C R ++ A + + M E+
Sbjct: 360 LIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRG-NIKEAEDMMSMMFER 418
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G L ++ D +G L A M + G PS ++
Sbjct: 419 GVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTY 462
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 118/251 (47%), Gaps = 19/251 (7%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G +PD+ Y I +C +++A ++ M + + PD ++YT +I G +G
Sbjct: 380 MVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGL 439
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEK--GLSPNATTY 118
+ A DVLK M + GC P Y+ C+ K L L +E+ +K ++ +
Sbjct: 440 LNPAFDVLKRMFDTGCDPSHHTYS------CLIKHL-----LKEELTKKYKNVALCDSIP 488
Query: 119 NLFFR--VFYWSN-DLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWN 174
N+FF W ++ L+ +M+ GC PN + ++ LCK ++ +A +L++
Sbjct: 489 NVFFADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVG-RLGVAQKLFD 547
Query: 175 DMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIK-ALMELA 233
M E+G + + L + C++G +A + M+E GH P S + L E
Sbjct: 548 HMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEG 607
Query: 234 NKQEALQNLSN 244
+K++A SN
Sbjct: 608 SKEKAKVVFSN 618
>gi|413942671|gb|AFW75320.1| hypothetical protein ZEAMMB73_530230 [Zea mays]
Length = 542
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 114/234 (48%), Gaps = 2/234 (0%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ P++VS N L+ + A K++++M I PDV++YT+++ G + A+
Sbjct: 196 ITPNLVSCNILLKGLVGIGDLNSALKVLDEMIGWGIVPDVVTYTTVLTAYCAKGDLEGAQ 255
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+ ++ G PDA Y I YC ++L+DA+ +MDEM G+ PN TY++
Sbjct: 256 QLFDDIIASGRRPDATMYTVLIDGYCHHRKLQDAARIMDEMGAAGVQPNEVTYSVVIEAC 315
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ +L M+G G +P+T C +V + + K A ++W MV+K
Sbjct: 316 CKERKSTEARDLTREMLGAGYVPDTPLCAKVVDVLCQDGKAGEANEMWRQMVKKSVPPDN 375
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEA 238
V L LC G + EA K F E+ E+G PS +++ I L E QEA
Sbjct: 376 TVVSTLIYWLCKKGMVQEARKLFDEL-ERGFLPSLLTYNSLIIGLCENGELQEA 428
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 119/250 (47%), Gaps = 9/250 (3%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G +PD Y LID YC R+++ A +I+++M + P+ ++Y+ +I + +A
Sbjct: 265 GRRPDATMYTVLIDGYCHHRKLQDAARIMDEMGAAGVQPNEVTYSVVIEACCKERKSTEA 324
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
RD+ +EM G PD + C + +A+ + +MV+K + P+ T + +
Sbjct: 325 RDLTREMLGAGYVPDTPLCAKVVDVLCQDGKAGEANEMWRQMVKKSVPPDNTVVS---TL 381
Query: 125 FYW---SNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKG 180
YW ++ + L+ + G LP+ + ++ LC+ E E A ++W+DMVE+
Sbjct: 382 IYWLCKKGMVQEARKLFDE-LERGFLPSLLTYNSLIIGLCENGELQE-AGRVWDDMVERR 439
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ + + L C +GK E F EM+ +G PS+ ++ + + + + +
Sbjct: 440 YEPNAMTYEALIKGFCKIGKSNEGYALFKEMMSRGCTPSKFLYQALVDSLSKPSHDDTVC 499
Query: 241 NLSNKMALFG 250
+ AL G
Sbjct: 500 TIVEAAALRG 509
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 47/85 (55%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E G P +++YN LI C++ ++++A ++ + M + P+ ++Y ++I G +G+ +
Sbjct: 402 ERGFLPSLLTYNSLIIGLCENGELQEAGRVWDDMVERRYEPNAMTYEALIKGFCKIGKSN 461
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAI 87
+ + KEM GC P Y A +
Sbjct: 462 EGYALFKEMMSRGCTPSKFLYQALV 486
>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 718
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 111/224 (49%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E G PD V++N L++ +C+ V A IV+ M ++ PDV +Y S+I G+ +G+ +
Sbjct: 256 EEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFE 315
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
KA ++L++M C P+ YN I C + A+ L +V KGL P+ T+N
Sbjct: 316 KAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLI 375
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
+ S + + ++ M GC P+ + L+ + +++ AL L +M G
Sbjct: 376 QGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCA 435
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+V + L D LC ++ +AE+ F +M G S V++ +
Sbjct: 436 RNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTL 479
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 113/227 (49%), Gaps = 2/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G PD+ +YN LI CK + EKA +I+++M + SP+ ++Y ++I L +
Sbjct: 289 MIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENE 348
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A D+ + + G PD +N I+ C++K A + +EM KG P+ TY++
Sbjct: 349 IEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSI 408
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+ L+ + L M +GC N L+ LCK + ++E A ++++ M
Sbjct: 409 LIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSR-RIEDAEEIFDQMELL 467
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G + + L D LC ++ EA + +MI +G KP + ++ +
Sbjct: 468 GVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSL 514
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 110/226 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G KPD +Y+ LID C +R++++A ++++M + + + Y ++I GL +
Sbjct: 394 MKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRR 453
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A ++ +M+ G + YN I C KR+ +AS LMD+M+ +GL P+ TYN
Sbjct: 454 IEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNS 513
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F D+ + ++ M GC P+ + L+ R +V++A +L + KG
Sbjct: 514 LLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKG 573
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + L + E + F EM+EK P ++ + +
Sbjct: 574 IVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIV 619
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 120/243 (49%), Gaps = 2/243 (0%)
Query: 11 VSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKE 70
VS L++ +CK+ +VE+A + V ++ +E SPD +++ S++ G +G + A D++
Sbjct: 229 VSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDF 288
Query: 71 MKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSND 130
M E G PD YN+ I C A ++ +M+ + SPN TYN N+
Sbjct: 289 MIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENE 348
Query: 131 LRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYILVSD 189
+ ++ +L ++ G LP+ + L++ LC + + +IA++++ +M KG
Sbjct: 349 IEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQ-DIAMEMFEEMKNKGCKPDEFTYS 407
Query: 190 VLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALF 249
+L D LC +L EA EM G + V + + + + + E + + ++M L
Sbjct: 408 ILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELL 467
Query: 250 GPS 252
G S
Sbjct: 468 GVS 470
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 105/217 (48%), Gaps = 2/217 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P+ V+YN LI CK+ ++E A + + + + PDV ++ ++I GL L D A ++
Sbjct: 331 PNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEM 390
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
+EMK GC PD Y+ I + C +RL++A L+ EM G + NA YN
Sbjct: 391 FEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCK 450
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYIL 186
S + + ++ +M G ++ + L+ LCK + +VE A QL + M+ +G
Sbjct: 451 SRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNK-RVEEASQLMDQMIMEGLKPDKF 509
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ L C +G + +A M G +P ++
Sbjct: 510 TYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTY 546
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 92/178 (51%), Gaps = 3/178 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+KPD +YN L+ +C+ +EKA IV+ M PD+ +Y ++IGGL G+ D A
Sbjct: 503 GLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVA 562
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR- 123
+L+ ++ G AYN I+ + KR ++ L EM+EK P+A T+ + FR
Sbjct: 563 SKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRG 622
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKG 180
+ ++ + + M+ G LP S FL + LC + + ++L N ++EK
Sbjct: 623 LCNGGGPIQEAIDFTVEMLEKGILPEFPSFGFLAEGLCSLSME-DTLIELINMVMEKA 679
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 108/239 (45%), Gaps = 35/239 (14%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ D+ ++N LI CK Q+ A ++E+M + + PD I++T+++ G G + A
Sbjct: 153 GIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGA 212
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ K+M YGC + + +C R+ +A + E+ E+G SP+ T+N
Sbjct: 213 LKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFN----- 267
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
S N +CR+ V AL + + M+EKGF
Sbjct: 268 --------SLVNGFCRI----------------------GNVNDALDIVDFMIEKGFDPD 297
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLS 243
+ + L +C +G+ +A + +MI + P+ V++ + + + N+ EA +L+
Sbjct: 298 VYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLA 356
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 109/243 (44%), Gaps = 3/243 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
++ G P+ ++ LI + ++E KI+E + PD Y + L +
Sbjct: 81 LKSSGSIPNATTFATLIQSFTNFHEIENLLKILEN--ELGFKPDTNFYNIALNALVEDNK 138
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ +M G D + +N I+ C A +LR A +++EM GL P+ T+
Sbjct: 139 LKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTT 198
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ F DL + + +M+G GCL S LV ++ +VE AL+ ++ E+G
Sbjct: 199 LMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEG 258
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
F + + L + C +G + +A MIEKG P ++ I + +L ++A+
Sbjct: 259 FSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAI 318
Query: 240 QNL 242
+ L
Sbjct: 319 EIL 321
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 56/122 (45%), Gaps = 1/122 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G +PDI +Y LI C+ +V+ A K++ ++ + I +Y +I L + +
Sbjct: 534 MASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKR 593
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCI-AKRLRDASGLMDEMVEKGLSPNATTYN 119
+ + +EM E PDA + R C +++A EM+EKG+ P ++
Sbjct: 594 TKEGMRLFREMMEKSDPPDALTHKIVFRGLCNGGGPIQEAIDFTVEMLEKGILPEFPSFG 653
Query: 120 LF 121
Sbjct: 654 FL 655
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/214 (19%), Positives = 84/214 (39%), Gaps = 38/214 (17%)
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
D +LK++K G P+A + I+++ + + +++ E G P+ YN+
Sbjct: 72 DSITTLLKQLKSSGSIPNATTFATLIQSFTNFHEIENLLKILEN--ELGFKPDTNFYNIA 129
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG- 180
N L+ L+ +M+ G + + + L+K + ++ A+ + +M G
Sbjct: 130 LNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGL 189
Query: 181 ------------------------------FGSYILVSD----VLFDLLCDMGKLVEAEK 206
G L+++ VL + C G++ EA +
Sbjct: 190 KPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALR 249
Query: 207 SFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
LE+ E+G P QV+F + + N +AL
Sbjct: 250 FVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDAL 283
>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1084
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 109/235 (46%), Gaps = 51/235 (21%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDIS----------------PDVISY 48
G KP++V+Y LID +CK Q+EKA +I +MR + S P+VI+Y
Sbjct: 560 GCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITY 619
Query: 49 TSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVE 108
+++ GL + +A ++L M +GC P+ Y+A I +C +L+DA + +M E
Sbjct: 620 GALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSE 679
Query: 109 KGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEI 168
+G SPN TY+ F + N L + +M+ C PN
Sbjct: 680 RGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPN------------------- 720
Query: 169 ALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ ++ +MV D LC +GK EA K L+M EKG P+ V++
Sbjct: 721 -VVIYTEMV---------------DGLCKIGKTDEAYKLMLKMEEKGCNPNVVTY 759
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 107/235 (45%), Gaps = 16/235 (6%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PD +Y+ +I C +VEKA+ + E+M+ I P V +YT +I G +A
Sbjct: 455 GFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQA 514
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
R EM GC P+ Y A I Y AK++ A L + M+ +G PN TY
Sbjct: 515 RKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDG 574
Query: 125 FYWSNDLRSSWNLYCRMMG---------------TGCL-PNTQSCMFLVKLCKRQEKVEI 168
+ + + +Y RM G C PN + LV + +V+
Sbjct: 575 HCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKE 634
Query: 169 ALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
A +L + M+ G +V D + D C +GKL +A++ F +M E+G+ P+ ++
Sbjct: 635 AHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTY 689
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 104/257 (40%), Gaps = 41/257 (15%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD V YN ++ C+ E+A I+ +MR P+V++Y ++ G GQ + + +
Sbjct: 277 PDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRI 336
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF----- 122
L M GCYP+ +N+ I YC ++ A L +M++ G P YN+F
Sbjct: 337 LSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCS 396
Query: 123 ------------------------------------RVFYWSNDLRSSWNLYCRMMGTGC 146
R + ++ + C MMG G
Sbjct: 397 NEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGF 456
Query: 147 LPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEK 206
+P+ + ++ KVE A L+ +M G + +L D C G + +A K
Sbjct: 457 VPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARK 516
Query: 207 SFLEMIEKGHKPSQVSF 223
F EM+ KG P+ V++
Sbjct: 517 WFDEMLHKGCTPNVVTY 533
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 123/269 (45%), Gaps = 18/269 (6%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++GV + V+ + C + ++A+KI+ +M + PD +Y+ +IG L +
Sbjct: 416 MLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASK 475
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA + +EMK G P Y I ++C A ++ A DEM+ KG +PN TY
Sbjct: 476 VEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTA 535
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDM---- 176
+ + + + L+ M+ GC PN + L+ + ++E A Q++ M
Sbjct: 536 LIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDI 595
Query: 177 ----VEKGF--------GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
++K F G ++ L D LC ++ EA + M+ G +P+Q+ +
Sbjct: 596 ESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYD 655
Query: 225 R-IKALMELANKQEALQNLSNKMALFGPS 252
I ++ Q+A Q + KM+ G S
Sbjct: 656 AVIDGFCKIGKLQDA-QEVFTKMSERGYS 683
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 88/186 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G +P+ + Y+ +ID +CK +++ A ++ KM + SP++ +Y+S I L +
Sbjct: 642 MLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNR 701
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D VL +M E C P+ Y + C + +A LM +M EKG +PN TY
Sbjct: 702 LDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTA 761
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F S + L+ M GC PN + L+ C ++ A +L ++M +
Sbjct: 762 MIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEMKQTY 821
Query: 181 FGSYIL 186
+ +IL
Sbjct: 822 WPKHIL 827
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 121/302 (40%), Gaps = 47/302 (15%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKM------------------------ 36
+++ G KP +YN LI V+ + +++ AY + +M
Sbjct: 202 LKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLSYAFVMDRYTLSCFAYSLCKGGK 261
Query: 37 ---------RDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAI 87
ED PD + Y ++ GL ++A D+L M+ C P+ Y +
Sbjct: 262 CREAFDLIDEAEDFVPDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILL 321
Query: 88 RNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCL 147
+L ++ M+ +G PN +N + S D ++ L+ +M+ GC
Sbjct: 322 SGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQ 381
Query: 148 PN-TQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDL--------LCDM 198
P +F+ +C +E+ + D+VEK + + + VL + LC
Sbjct: 382 PGYLVYNIFIGSVCSNEEQPSSDIL---DLVEKAYSEMLDLGVVLNKVNVSNFARCLCGA 438
Query: 199 GKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFGPSMIPKRE 258
GK +A K EM+ KG P ++ ++ + A+K E +L +M G ++P
Sbjct: 439 GKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNG--IVPSVY 496
Query: 259 EY 260
Y
Sbjct: 497 TY 498
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 116/245 (47%), Gaps = 9/245 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E P++V Y ++D CK + ++AYK++ KM ++ +P+V++YT++I G G G+
Sbjct: 712 MLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGK 771
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++ ++ ++M GC P+ Y I + C L +A L+DEM + + ++
Sbjct: 772 IEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRK 831
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F S + +S L + +P L+ + ++E+AL L ++
Sbjct: 832 IIEGF--SQEFITSIGLLDELSENESVPVDSLYRILIDNYIKAGRLEVALDLLEEISSSP 889
Query: 181 FGS----YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS-QVSFRRIKALMELANK 235
+ Y+ S L + L K+ +A + + MI K P + IK L+++
Sbjct: 890 SHAVSNKYLYAS--LIENLSHASKVDKALELYASMISKNVVPELSILVHLIKGLIKVDKW 947
Query: 236 QEALQ 240
QEALQ
Sbjct: 948 QEALQ 952
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 100/248 (40%), Gaps = 41/248 (16%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGG---------- 54
G P+ +N LI YCK R AYK+ +KM P + Y IG
Sbjct: 344 GCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQPSS 403
Query: 55 ---------------LGLV----------------GQPDKARDVLKEMKEYGCYPDAAAY 83
LG+V G+ D+A ++ EM G PD + Y
Sbjct: 404 DILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTY 463
Query: 84 NAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMG 143
+ I C A ++ A L +EM G+ P+ TY + F + ++ + + M+
Sbjct: 464 SKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLH 523
Query: 144 TGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVE 203
GC PN + L+ + +++ +A +L+ M+ +G ++ L D C G++ +
Sbjct: 524 KGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEK 583
Query: 204 AEKSFLEM 211
A + + M
Sbjct: 584 ACQIYARM 591
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 43/210 (20%), Positives = 87/210 (41%), Gaps = 2/210 (0%)
Query: 14 NCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKE 73
N L+ C++ A + + +++D P +Y ++I + D A V +EM
Sbjct: 180 NFLVRKCCRNGWWNMALEELGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLS 239
Query: 74 YGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRS 133
Y D + + C + R+A L+DE + P+ YN ++
Sbjct: 240 YAFVMDRYTLSCFAYSLCKGGKCREAFDLIDE--AEDFVPDTVFYNRMVSGLCEASLFEE 297
Query: 134 SWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFD 193
+ ++ RM + C+PN + L+ C R+ ++ ++ + M+ +G + + L
Sbjct: 298 AMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIH 357
Query: 194 LLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
C A K F +MI+ G +P + +
Sbjct: 358 AYCKSRDYSYAYKLFKKMIKCGCQPGYLVY 387
>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
Length = 791
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 108/218 (49%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ PD+V+Y+ +I CK + ++KA +++ M + P+ ++Y SI+ G QP +A
Sbjct: 227 ISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAI 286
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
LK+M+ G PD YN+ + C R +A + D M ++GL P+ TY + +
Sbjct: 287 GFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGY 346
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
L L M+ G P+ L+ +QEKV+ A+ +++ M + G +
Sbjct: 347 ATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNV 406
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + +LC G + +A F +MI++G P+ + +
Sbjct: 407 VTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVY 444
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 112/226 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV P+ ++YN ++ YC Q ++A ++KMR + + PDV++Y S++ L G+
Sbjct: 257 MVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGR 316
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR + M + G PD A Y ++ Y L + L+D MV G+ P+ +N+
Sbjct: 317 STEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNI 376
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + ++ +M G PN + ++ + + V+ A+ + M+++G
Sbjct: 377 LICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEG 436
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
I+V L LC K +AE+ LEM+++G + + F I
Sbjct: 437 LTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSI 482
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 110/215 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G+ P++V+Y +I + CK V+ A E+M DE ++P++I YTS+I L + +
Sbjct: 397 MRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDK 456
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA +++ EM + G + +N+ I ++C R+ ++ L D MV G+ PN TY+
Sbjct: 457 WDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYST 516
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + + L M G P+ + L+ R +++ AL L+ +MV G
Sbjct: 517 LIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSG 576
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
I+ +++ L + A++ ++ + + G
Sbjct: 577 VSPNIITYNIILQGLFHTRRTAAAKELYVGITKSG 611
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 122/255 (47%), Gaps = 2/255 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR GV+PD+V+YN L+D CK+ + +A KI + M + PD+ +Y +++ G G
Sbjct: 292 MRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGA 351
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ +L M G +PD +N I Y +++ +A + +M + GL+PN TY
Sbjct: 352 LVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGA 411
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ S + + + +M+ G PN L+ +K + A +L +M+++G
Sbjct: 412 VIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRG 471
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ + + C G+++E+EK F M+ G KP+ +++ + LA K +
Sbjct: 472 ICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEAT 531
Query: 241 NLSNKMALFGPSMIP 255
L + M F M P
Sbjct: 532 KLLSSM--FSVGMKP 544
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 105/226 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ PD +N LI Y K +V++A + KMR ++P+V++Y ++IG L G
Sbjct: 362 MVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGS 421
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A ++M + G P+ Y + I + CI + A L+ EM+++G+ N +N
Sbjct: 422 VDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNS 481
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ S L+ M+ G PN + L+ K++ A +L + M G
Sbjct: 482 IIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVG 541
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + L + C + ++ +A F EM+ G P+ +++ I
Sbjct: 542 MKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNII 587
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 98/227 (43%), Gaps = 5/227 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDE---DISPDVISYTSIIGGLGL 57
M E+ PD+ S L+ C + + ++A +++ M D+ +PDV+SYT++I G
Sbjct: 149 MTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFK 208
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
G DKA EM + PD Y++ I C + + A ++ MV+ G+ PN T
Sbjct: 209 EGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMT 268
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDM 176
YN + S + + +M G P+ + L+ LCK E A ++++ M
Sbjct: 269 YNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTE-ARKIFDSM 327
Query: 177 VEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++G I L G LVE M+ G P F
Sbjct: 328 TKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVF 374
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 83/217 (38%), Gaps = 8/217 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV P+I++YN ++ R+ A ++ + ++ +Y I+ GL
Sbjct: 572 MVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNL 631
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + + + + +N I R +A L GL PN TY L
Sbjct: 632 TDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRL 691
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
L L+ M GC ++ F+V+ ++ ++ A + + EK
Sbjct: 692 MAENIIGQGLLEELDQLFFSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKH 751
Query: 181 FGSYILVSDVLFDLLCDMGK-------LVEAEKSFLE 210
F + + DLL GK L E KSF+E
Sbjct: 752 FSLEASTASLFIDLLSG-GKYQEYHRFLPEKYKSFIE 787
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 49/258 (18%), Positives = 88/258 (34%), Gaps = 76/258 (29%)
Query: 41 ISPDVISYTSIIG----------GLGLVGQ--------------------------PDKA 64
++P V +Y +IG G +G D
Sbjct: 83 VTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAM 142
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEK---GLSPNATTYNLF 121
VL+ M E C PD + ++ C R ++A L+ M + G +P+ +Y
Sbjct: 143 DIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTV 202
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F+ D +++ Y M+ P+ + + LCK Q ++ A+++ MV+ G
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQ-AMDKAMEVLTTMVKNG 261
Query: 181 -----------FGSY------------------------ILVSDVLFDLLCDMGKLVEAE 205
Y ++ + L D LC G+ EA
Sbjct: 262 VMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEAR 321
Query: 206 KSFLEMIEKGHKPSQVSF 223
K F M ++G +P ++
Sbjct: 322 KIFDSMTKRGLEPDIATY 339
>gi|242062032|ref|XP_002452305.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
gi|241932136|gb|EES05281.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
Length = 347
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 113/228 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G PDI++YN +++ C++ +V+ A + +E + P+ +SY ++ GL +
Sbjct: 7 MRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGLFTAER 66
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A +++EM GC P+ +N I C + A +++++ + G +PN+ +YN
Sbjct: 67 WEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNSLSYNP 126
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + + M+ GC P+ S L+ R +V++A+ L + + KG
Sbjct: 127 LLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQLKGKG 186
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKA 228
++ + + D L GK EA + EMI KG +P +++ I +
Sbjct: 187 CSPVLISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIAS 234
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 126/245 (51%), Gaps = 6/245 (2%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G +P+ VSYN ++ + E A K++E+M + P+V+++ +I L G + A
Sbjct: 46 GGEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPA 105
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+VL+++ +YGC P++ +YN + +C K++ A ++ MV +G P+ +YN
Sbjct: 106 MEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTA 165
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ ++ + +L ++ G GC P S ++ + K + AL+L ++M+ KG
Sbjct: 166 LCRNGEVDVAIDLLHQLKGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMISKGLQPD 225
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSN 244
I+ + LC K+ EA ++F ++ + G +P+ V + I L+ L ++E N
Sbjct: 226 IITYTTIASGLCREDKIEEAIRTFCKVQDMGIRPTVVLYNAI--LLGLCKRRET----HN 279
Query: 245 KMALF 249
+ LF
Sbjct: 280 AIDLF 284
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 107/213 (50%), Gaps = 1/213 (0%)
Query: 31 KIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNY 90
K++++MRD+ +PD+I+Y ++ G+ G+ D A + L+ + YG P+ +YN ++
Sbjct: 2 KLLDEMRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGL 61
Query: 91 CIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNT 150
A+R DA LM+EM KG PN T+N+ + + + ++ GC PN+
Sbjct: 62 FTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNS 121
Query: 151 QSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLE 210
S L+ +Q+K++ A+ MV +G I+ + L LC G++ A +
Sbjct: 122 LSYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQ 181
Query: 211 MIEKGHKPSQVSFRR-IKALMELANKQEALQNL 242
+ KG P +S+ I L + +EAL+ L
Sbjct: 182 LKGKGCSPVLISYNTVIDGLTKAGKTKEALELL 214
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 86/180 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PDIVSYN L+ C++ +V+ A ++ +++ + SP +ISY ++I GL G+
Sbjct: 147 MVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQLKGKGCSPVLISYNTVIDGLTKAGK 206
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++L EM G PD Y C ++ +A ++ + G+ P YN
Sbjct: 207 TKEALELLDEMISKGLQPDIITYTTIASGLCREDKIEEAIRTFCKVQDMGIRPTVVLYNA 266
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ +L+ M+ GC+PN + LV+ + V+ A L + +G
Sbjct: 267 ILLGLCKRRETHNAIDLFSYMISNGCMPNESTYTILVEGLAYEGLVKEARDLLGQLCSRG 326
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 102/223 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P++V++N LI C+ VE A +++E++ +P+ +SY ++ +
Sbjct: 77 MAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNSLSYNPLLHAFCKQKK 136
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA ++ M GCYPD +YN + C + A L+ ++ KG SP +YN
Sbjct: 137 MDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQLKGKGCSPVLISYNT 196
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + L M+ G P+ + + R++K+E A++ + + + G
Sbjct: 197 VIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCREDKIEEAIRTFCKVQDMG 256
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+++ + + LC + A F MI G P++ ++
Sbjct: 257 IRPTVVLYNAILLGLCKRRETHNAIDLFSYMISNGCMPNESTY 299
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 57/111 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G++PDI++Y + C++ ++E+A + K++D I P V+ Y +I+ GL +
Sbjct: 217 MISKGLQPDIITYTTIASGLCREDKIEEAIRTFCKVQDMGIRPTVVLYNAILLGLCKRRE 276
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGL 111
A D+ M GC P+ + Y + +++A L+ ++ +G+
Sbjct: 277 THNAIDLFSYMISNGCMPNESTYTILVEGLAYEGLVKEARDLLGQLCSRGV 327
>gi|357507167|ref|XP_003623872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498887|gb|AES80090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 539
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 104/214 (48%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
V PD+ ++N LID CK +V +AY +V M PD++SY +++ G L G +A+
Sbjct: 277 VYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAK 336
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
V +M E P+ +Y I YC + + +A L+ EM K L P+ TYN
Sbjct: 337 QVFDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGL 396
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
S W+L M +G + + L+ + EK + AL L+ ++E G I
Sbjct: 397 SKSGRSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNI 456
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
++L D LC G+L A++ F + KG +P+
Sbjct: 457 RTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPN 490
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 106/226 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G KPDIVSYN L++ YC V +A ++ +KM + P+VISY ++I G V
Sbjct: 307 MIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRM 366
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A +L EM PD YN + + R L++ M G + TYN+
Sbjct: 367 VDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNV 426
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++ + L+ ++ G PN ++ L+ + +++ A +++ + KG
Sbjct: 427 LLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKG 486
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
I +++ LC G L EAE +M+ + P+ ++F I
Sbjct: 487 CQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNYLPNYITFDTI 532
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 9/215 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+++ V P+++ YN +ID CK V++A + +M + I DV SY S+I G VG+
Sbjct: 201 MKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGR 260
Query: 61 PDKARDVLKEMKEYG-CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
A +L EM G YPD +N I C R+ +A ++ M+++G P+ +YN
Sbjct: 261 FQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYN 320
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVE 178
+ S + + ++ +M+ LPN S C + CK + V+ A+ L +M
Sbjct: 321 ALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVR-MVDEAMVLLTEMHN 379
Query: 179 KGFGSYILVSDVLFDLLCDMGK------LVEAEKS 207
K + + L D L G+ LVEA ++
Sbjct: 380 KNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRA 414
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 102/220 (46%), Gaps = 1/220 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G + D V Y +I+ CK + A ++ KM+ + P++I Y ++I GL G D+A
Sbjct: 170 GFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEA 229
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKG-LSPNATTYNLFFR 123
+ EM E G D +YN+ I +C R + A L+DEMV +G + P+ T+N+
Sbjct: 230 CGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILID 289
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
+ ++N+ M+ G P+ S L+ V A Q+++ MVE+
Sbjct: 290 GLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALP 349
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ L + C + + EA EM K P V++
Sbjct: 350 NVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTY 389
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 105/223 (47%), Gaps = 3/223 (1%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
+MG + D+ L+ C +V +A ++ + D D + Y +II GL +G+
Sbjct: 133 KMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKTR 192
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
A + +MK+ YP+ YN I C + +A GL EMVE G+ + +YN
Sbjct: 193 DAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMI 252
Query: 123 RVFYWSNDLRSSWNLYCRMMGTG-CLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKG 180
F +++ L M+ G P+ + L+ LCK +V A + M+++G
Sbjct: 253 HGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLG-RVSEAYNVVAVMIKRG 311
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ I+ + L + C G + EA++ F +M+E+ P+ +S+
Sbjct: 312 WKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISY 354
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 63/123 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G D+++YN L+D Y K + +KA + + + + ISP++ +Y ++ GL G+
Sbjct: 412 MRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGR 471
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A+++ + + GC P+ YN I C L +A L+ +MV PN T++
Sbjct: 472 LKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNYLPNYITFDT 531
Query: 121 FFR 123
R
Sbjct: 532 IVR 534
>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
Length = 684
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 121/247 (48%), Gaps = 2/247 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G P+IV+Y+ L+ +C++ + A ++++M + S + Y II LG G+
Sbjct: 377 MEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGK 436
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A +++EMK GC PD YN I + C ++ +A + ++E+G+ N TYN
Sbjct: 437 LDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNT 496
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
S + L M+ GC + S L+K ++ V+ ++ L +M+ KG
Sbjct: 497 LIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKG 556
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
++L + LC GK+ +A + EM+ +G P V++ I L ++ AL
Sbjct: 557 IKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAAL 616
Query: 240 QNLSNKM 246
NL K+
Sbjct: 617 -NLLEKL 622
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 120/247 (48%), Gaps = 6/247 (2%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G P +V+Y L+ C+ RQ ++AY ++ ++ + + V+ ++I G G+ +A
Sbjct: 280 GCTPSVVTYGFLLRGLCRTRQADEAYAMLGRVPEVN----VVMLNTVIRGCLAEGKLARA 335
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++ + M GC PD YN + C R A ++DEM EKG +PN TY+
Sbjct: 336 TELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHS 395
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
F + + + +M G N+Q ++ + K++ A++L +M +G
Sbjct: 396 FCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPD 455
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLS 243
I + + LC+ ++ EAE F ++E+G + +++ I AL+ QE L+ L+
Sbjct: 456 ICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLR-LA 514
Query: 244 NKMALFG 250
N+M L G
Sbjct: 515 NEMVLHG 521
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 73/125 (58%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+KP+ SYN LI+ CK +V A ++ ++M ++ ++PD+++Y ++I GL VG
Sbjct: 552 MMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGW 611
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A ++L+++ +PD YN I +C + L DAS L+D+ V G+ PN T+ +
Sbjct: 612 THAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDASMLLDKAVSGGIVPNERTWGM 671
Query: 121 FFRVF 125
+ F
Sbjct: 672 MVQNF 676
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 102/223 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G KPDI +YN +I C + Q+++A I + +E + + I+Y ++I L G+
Sbjct: 447 MKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGR 506
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ + EM +GC D +YN I+ C + + L++EM+ KG+ PN +YN+
Sbjct: 507 WQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNM 566
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ +R + L M+ G P+ + L+ + AL L + +
Sbjct: 567 LINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNEN 626
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I+ ++L C + L +A + + G P++ ++
Sbjct: 627 VHPDIVTYNILISWHCKVRLLDDASMLLDKAVSGGIVPNERTW 669
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 94/223 (42%), Gaps = 8/223 (3%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
V P ++ C+ + A ++ M PD + Y ++I L G +A
Sbjct: 176 VPPTTFTFGVAARALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAA 235
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+L EM GC D +N + C +R+A+ L+D M+ G +P+ TY R
Sbjct: 236 TLLDEMLLMGCAADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGL 295
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMF--LVKLCKRQEKVEIALQLWNDMVEKGFGS 183
+ ++ + R +P M +++ C + K+ A +L+ M KG
Sbjct: 296 CRTRQADEAYAMLGR------VPEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPP 349
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ ++L LC +G+ A + EM EKG P+ V++ +
Sbjct: 350 DVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTL 392
>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
Length = 762
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 108/218 (49%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ PD+V+Y+ +I CK + ++KA +++ M + P+ ++Y SI+ G QP +A
Sbjct: 227 ISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAI 286
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
LK+M+ G PD YN+ + C R +A + D M ++GL P+ TY + +
Sbjct: 287 GFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGY 346
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
L L M+ G P+ L+ +QEKV+ A+ +++ M + G +
Sbjct: 347 ATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNV 406
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + +LC G + +A F +MI++G P+ + +
Sbjct: 407 VTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVY 444
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 112/226 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV P+ ++YN ++ YC Q ++A ++KMR + + PDV++Y S++ L G+
Sbjct: 257 MVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGR 316
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR + M + G PD A Y ++ Y L + L+D MV G+ P+ +N+
Sbjct: 317 STEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNI 376
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + ++ +M G PN + ++ + + V+ A+ + M+++G
Sbjct: 377 LICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEG 436
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
I+V L LC K +AE+ LEM+++G + + F I
Sbjct: 437 LTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSI 482
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 110/215 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G+ P++V+Y +I + CK V+ A E+M DE ++P++I YTS+I L + +
Sbjct: 397 MRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDK 456
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA +++ EM + G + +N+ I ++C R+ ++ L D MV G+ PN TY+
Sbjct: 457 WDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYST 516
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + + L M G P+ + L+ R +++ AL L+ +MV G
Sbjct: 517 LIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSG 576
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
I+ +++ L + A++ ++ + + G
Sbjct: 577 VSPNIITYNIILQGLFHTRRTAAAKELYVGITKSG 611
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 122/255 (47%), Gaps = 2/255 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR GV+PD+V+YN L+D CK+ + +A KI + M + PD+ +Y +++ G G
Sbjct: 292 MRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGA 351
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ +L M G +PD +N I Y +++ +A + +M + GL+PN TY
Sbjct: 352 LVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGA 411
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ S + + + +M+ G PN L+ +K + A +L +M+++G
Sbjct: 412 VIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRG 471
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ + + C G+++E+EK F M+ G KP+ +++ + LA K +
Sbjct: 472 ICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEAT 531
Query: 241 NLSNKMALFGPSMIP 255
L + M F M P
Sbjct: 532 KLLSSM--FSVGMKP 544
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 104/222 (46%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ PD +N LI Y K +V++A + KMR ++P+V++Y ++IG L G D A
Sbjct: 366 GIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDA 425
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++M + G P+ Y + I + CI + A L+ EM+++G+ N +N
Sbjct: 426 MLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHS 485
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ S L+ M+ G PN + L+ K++ A +L + M G
Sbjct: 486 HCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPD 545
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + L + C + ++ +A F EM+ G P+ +++ I
Sbjct: 546 CVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNII 587
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 98/227 (43%), Gaps = 5/227 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDE---DISPDVISYTSIIGGLGL 57
M E+ PD+ S L+ C + + ++A +++ M D+ +PDV+SYT++I G
Sbjct: 149 MTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFK 208
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
G DKA EM + PD Y++ I C + + A ++ MV+ G+ PN T
Sbjct: 209 EGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMT 268
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDM 176
YN + S + + +M G P+ + L+ LCK E A ++++ M
Sbjct: 269 YNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTE-ARKIFDSM 327
Query: 177 VEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++G I L G LVE M+ G P F
Sbjct: 328 TKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVF 374
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 72/151 (47%), Gaps = 4/151 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +GVKP++++Y+ LID YC ++++A K++ M + PD ++Y ++I G V +
Sbjct: 502 MVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSR 561
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A + KEM G P+ YN ++ +R A L + + G +TYN+
Sbjct: 562 MDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNI 621
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQ 151
+N + RM CL + Q
Sbjct: 622 ILHGLCKNNLTDEAL----RMFQNLCLTDLQ 648
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 57/127 (44%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G + ++ +YN ++ CK+ ++A ++ + + D+ + ++ +IG L VG+ D+A
Sbjct: 611 GTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEA 670
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+D+ + G PD Y+ N L + L M E G + N+ N R
Sbjct: 671 KDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRK 730
Query: 125 FYWSNDL 131
D+
Sbjct: 731 LLQRGDI 737
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 49/258 (18%), Positives = 88/258 (34%), Gaps = 76/258 (29%)
Query: 41 ISPDVISYTSIIG----------GLGLVGQ--------------------------PDKA 64
++P V +Y +IG G +G D
Sbjct: 83 VTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAM 142
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEK---GLSPNATTYNLF 121
VL+ M E C PD + ++ C R ++A L+ M + G +P+ +Y
Sbjct: 143 DIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTV 202
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F+ D +++ Y M+ P+ + + LCK Q ++ A+++ MV+ G
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQ-AMDKAMEVLTTMVKNG 261
Query: 181 -----------FGSY------------------------ILVSDVLFDLLCDMGKLVEAE 205
Y ++ + L D LC G+ EA
Sbjct: 262 VMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEAR 321
Query: 206 KSFLEMIEKGHKPSQVSF 223
K F M ++G +P ++
Sbjct: 322 KIFDSMTKRGLEPDIATY 339
>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
[Vitis vinifera]
Length = 691
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 114/243 (46%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
D ++Y L+ CK+ + KA I+E+ + D +Y+S+I GL G+ D+ VL
Sbjct: 393 DSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVL 452
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
+M ++GC P+ NA I + A +L DA MV KG P TYN +
Sbjct: 453 DQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKA 512
Query: 129 NDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVS 188
++ L M+ G PN + L+ + +K+++AL LW +EKGF + +
Sbjct: 513 ERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMH 572
Query: 189 DVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMAL 248
+++ LC GK+ +A + + EM ++ P+ V+ + E + + +
Sbjct: 573 NIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQ 632
Query: 249 FGP 251
+GP
Sbjct: 633 YGP 635
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 111/232 (47%), Gaps = 1/232 (0%)
Query: 10 IVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLK 69
+VSYN LI ++ +V++A I E + ++D D ++Y ++ GL G +KA +L+
Sbjct: 359 VVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILE 418
Query: 70 EMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSN 129
E + D AY++ I C RL + +G++D+M + G PN N F ++
Sbjct: 419 EAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRAS 478
Query: 130 DLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSD 189
L + + M+ GC P + L+ + E+ A L +M+ KG+ ++
Sbjct: 479 KLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYS 538
Query: 190 VLFDLLCDMGKLVEAEKSFLEMIEKGHKPS-QVSFRRIKALMELANKQEALQ 240
+L + LC KL A + + +EKG KP ++ I L ++ALQ
Sbjct: 539 LLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQ 590
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 106/228 (46%), Gaps = 2/228 (0%)
Query: 1 MREM-GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVG 59
M E+ G +P I SYN L++ + + ++A +SP++ +Y +I
Sbjct: 104 MHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKK 163
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
Q DKA+++L M E G PD +Y I + + DA L DEM E+G++P+ YN
Sbjct: 164 QFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYN 223
Query: 120 LFFRVFYWSNDLRSSWNLYCRMM-GTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
+ F+ D+ ++ ++ R++ G PN S ++ + K + + ++W+ M +
Sbjct: 224 ILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKK 283
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G + L LC G L A + + EM E G P V + +
Sbjct: 284 NERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTM 331
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 99/215 (46%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
D +Y+ +I+ C++ ++++ ++++M P+ ++I G + + A
Sbjct: 428 DTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFF 487
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
M GC+P YN I A+R +A L+ EM+ KG PN TY+L
Sbjct: 488 GNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQG 547
Query: 129 NDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVS 188
L + NL+C+ + G P+ + ++ KVE ALQL+++M ++ ++
Sbjct: 548 KKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTH 607
Query: 189 DVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ L + + A K + +++ G +P +S+
Sbjct: 608 NTLMEGFYKVRDFERASKIWDHILQYGPQPDIISY 642
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 104/223 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G KP+ N +I+ + + ++E A + M + P V++Y ++I GL +
Sbjct: 455 MTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAER 514
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++KEM G P+ Y+ + C K+L A L + +EKG P+ +N+
Sbjct: 515 FSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNI 574
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
S + + LY M C+PN + L++ + E A ++W+ +++ G
Sbjct: 575 IIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYG 634
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I+ ++ LC ++ +A + +++G P+ +++
Sbjct: 635 PQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITW 677
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 94/202 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P +V+YN LI+ K + +AY +V++M + P++I+Y+ ++ GL +
Sbjct: 490 MVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKK 549
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A ++ + E G PD +N I C + ++ DA L EM ++ PN T+N
Sbjct: 550 LDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNT 609
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
FY D + ++ ++ G P+ S +K ++ A+ ND V++G
Sbjct: 610 LMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRG 669
Query: 181 FGSYILVSDVLFDLLCDMGKLV 202
+ ++L + D G L
Sbjct: 670 VLPTAITWNILVRAVLDNGALT 691
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 115/239 (48%), Gaps = 5/239 (2%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
MG+ P++ +YN LI + C+ +Q +KA +++ M ++ SPDV SY ++I L G
Sbjct: 143 MGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSD 202
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLS--PNATTYNLF 121
A + EM E G PD A YN I + + +AS + + ++ KG S PN +YN+
Sbjct: 203 ALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLL-KGPSVYPNIPSYNVM 261
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
S+ ++ RM + + L+ ++ A +++ +M E G
Sbjct: 262 INGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGV 321
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEAL 239
++V + + + G++ E + + M ++G + + VS+ I+ L E A EA+
Sbjct: 322 SPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAI 379
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 99/251 (39%), Gaps = 38/251 (15%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVI-------------- 46
M E G PD+ SY LI+ K+ + A K+ ++M + ++PDV
Sbjct: 175 MWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGD 234
Query: 47 ----------------------SYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYN 84
SY +I GL G+ D++ ++ MK+ D Y+
Sbjct: 235 ILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYS 294
Query: 85 AAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGT 144
I C + L A+ + EM E G+SP+ YN + + + L+ M
Sbjct: 295 TLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKE 354
Query: 145 GCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEA 204
GC S L++ KV+ A+ +W + EK + + VL LC G L +A
Sbjct: 355 GC-RTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKA 413
Query: 205 EKSFLEMIEKG 215
S LE E G
Sbjct: 414 -LSILEEAENG 423
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 98/241 (40%), Gaps = 43/241 (17%)
Query: 24 RQVEKAYKIVEKMRDEDIS-PDVISYTSIIGGLGLVGQPDKARDVLKEMKE-YGCYPDAA 81
+ V +IVE +R + P+ ++ T +I PD+A D+ + M E +GC P
Sbjct: 57 KLVAHVSRIVELIRTQKCKCPEDVALT-VIKAYAKNSMPDQALDIFQRMHEIFGCQPGIR 115
Query: 82 AYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRM 141
+YN+ + + + +A GLSPN TYN+
Sbjct: 116 SYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNI--------------------- 154
Query: 142 MGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKL 201
L+K+ R+++ + A +L N M E+GF + L + L G +
Sbjct: 155 --------------LIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYM 200
Query: 202 VEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSN--KMALFGPSMIPKREE 259
+A K F EM E+G P + L++ K+ + N S + L GPS+ P
Sbjct: 201 SDALKLFDEMPERGVTPDVACY---NILIDGFFKKGDILNASEIWERLLKGPSVYPNIPS 257
Query: 260 Y 260
Y
Sbjct: 258 Y 258
>gi|168059281|ref|XP_001781632.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666946|gb|EDQ53588.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 132/273 (48%), Gaps = 5/273 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G++ DI ++N LID CK Q+E A I+ MR ++ISP+V++Y+++I G G +G
Sbjct: 332 MQRRGIEQDIFTFNTLIDAVCKGGQMELAASIMTTMRGKNISPNVVTYSTMIDGYGKLGC 391
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A + +MKE G PD +YN I Y R DA +M GL + TYN
Sbjct: 392 FEEAISLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALIACKDMERVGLKADVVTYNA 451
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + L+ +M G G +PN + L+ + + ++ + G
Sbjct: 452 LIDAYGKQGKYKDAACLFDKMKGEGLVPNVLTYSALIDSYSKAGMHQDVSNVFTEFKRAG 511
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI---KALMELANKQE 237
+++ L D C G + +A EM + G +P+ V++ + A+K E
Sbjct: 512 LKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRYGQADKLE 571
Query: 238 ALQ-NLSNKMALFGP-SMIPKREEYLAEMSASD 268
A++ N+ N + G SM R+ ++ +ASD
Sbjct: 572 AVKANMPNSVQKIGERSMEVVRKPPPSQQNASD 604
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 118/250 (47%), Gaps = 4/250 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDR-QVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVG 59
M++ G KP++++YN +ID K +++A I ++M+ E + PD I++ S+I G
Sbjct: 261 MKKAGCKPNLITYNTIIDACGKGGVDLKQALDIFDEMQKEGVEPDRITFNSLIAVCSRGG 320
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ ++ V EM+ G D +N I C ++ A+ +M M K +SPN TY+
Sbjct: 321 LWEDSQRVFAEMQRRGIEQDIFTFNTLIDAVCKGGQMELAASIMTTMRGKNISPNVVTYS 380
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ + +LY M +G P+ S L+ + + + + AL DM
Sbjct: 381 TMIDGYGKLGCFEEAISLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALIACKDMERV 440
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
G + ++ + L D GK +A F +M +G P+ +++ AL++ +K
Sbjct: 441 GLKADVVTYNALIDAYGKQGKYKDAACLFDKMKGEGLVPNVLTY---SALIDSYSKAGMH 497
Query: 240 QNLSNKMALF 249
Q++SN F
Sbjct: 498 QDVSNVFTEF 507
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 93/215 (43%), Gaps = 3/215 (1%)
Query: 14 NCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKE 73
+ +I + +VE A + + + +V +Y++++ G G+ +A V + MK+
Sbjct: 204 SIMISTLGRLGKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKK 263
Query: 74 YGCYPDAAAYNAAIRNYC--IAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDL 131
GC P+ YN I + C L+ A + DEM ++G+ P+ T+N V
Sbjct: 264 AGCKPNLITYNTII-DACGKGGVDLKQALDIFDEMQKEGVEPDRITFNSLIAVCSRGGLW 322
Query: 132 RSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVL 191
S ++ M G + + L+ + ++E+A + M K ++ +
Sbjct: 323 EDSQRVFAEMQRRGIEQDIFTFNTLIDAVCKGGQMELAASIMTTMRGKNISPNVVTYSTM 382
Query: 192 FDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
D +G EA + +M E G +P +VS+ +
Sbjct: 383 IDGYGKLGCFEEAISLYHDMKESGVRPDRVSYNTL 417
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 62/147 (42%), Gaps = 41/147 (27%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+ G+KPD+V Y+ LID CK VE A ++++M I P++++Y S+I G GQ
Sbjct: 507 FKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRYGQ 566
Query: 61 PDK-----------------------------------------ARDVLKEMKEYGCYPD 79
DK A V EM+++G P+
Sbjct: 567 ADKLEAVKANMPNSVQKIGERSMEVVRKPPPSQQNASDHTGVLAAVSVFHEMQQFGLKPN 626
Query: 80 AAAYNAAIRNYCIAKRLRDASGLMDEM 106
++A + L++AS L+++M
Sbjct: 627 VVTFSAILNACSRCASLQEASVLLEQM 653
>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
Length = 651
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 112/223 (50%), Gaps = 1/223 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G P ++ +N +I+ +CK + ++ AYK++E M ++ P+V ++T +I GL + +A
Sbjct: 179 GFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEA 238
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ +L++M GC P+ Y+ I C ++ DA L M + PN T+N+
Sbjct: 239 QQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDG 298
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + + LY RM TGC P+ + L+ + +V+ A QL+ + E G +
Sbjct: 299 LCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAA 358
Query: 185 ILVS-DVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
V+ LF +G++ +A + F +++KG P ++ +
Sbjct: 359 NAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSL 401
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 118/257 (45%), Gaps = 6/257 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISP-DVISYTSIIGGLGLVG 59
MRE G PDI++YN LID CK QV++A+++ + + + +S + ++Y+++ G +G
Sbjct: 315 MRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALG 374
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ A + + + G PD A Y + I YC R + L++EM KG P T +
Sbjct: 375 RMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLS 434
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ N + L+ M GC + +V+ R K AL + +++K
Sbjct: 435 AVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDK 494
Query: 180 ---GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANK 235
F D L + LC +G+ +A++ +M E+G + S+ + L L
Sbjct: 495 RDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRW 554
Query: 236 QEALQNLSNKMALFGPS 252
EA Q + M GP+
Sbjct: 555 DEATQ-VFEAMVSAGPA 570
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 110/220 (50%), Gaps = 2/220 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD+++Y L+ CK + ++A ++ +M +PD ++++++I GL G ++A V
Sbjct: 76 PDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKFGSEEQAFRV 135
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIA-KRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
L+++ + G AA+ I+ C + AS ++ ++ KG +P +NL F
Sbjct: 136 LEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFC 195
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+ DL S++ L M+ GC+PN + L+ + +V A QL MV G ++
Sbjct: 196 KAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSPNVV 255
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + LC G++ +A + F +++E+ + P V I
Sbjct: 256 TYSTVINGLCKQGQVDDAYELF-QLMERRNCPPNVVTHNI 294
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 114/245 (46%), Gaps = 5/245 (2%)
Query: 1 MREM---GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGL-G 56
+REM G PD V+++ LID CK E+A++++E + + ++ +II L
Sbjct: 101 LREMIARGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCN 160
Query: 57 LVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNAT 116
+ A VL + G P +N I +C AK L A L++ M+EKG PN
Sbjct: 161 KYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVF 220
Query: 117 TYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDM 176
T+ + +N + + L +M+ GC PN + ++ +Q +V+ A +L+ M
Sbjct: 221 TFTILITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLM 280
Query: 177 VEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANK 235
+ ++ ++L D LC ++ EA + + M E G P +++ I L +
Sbjct: 281 ERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQV 340
Query: 236 QEALQ 240
EA Q
Sbjct: 341 DEAFQ 345
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 116/251 (46%), Gaps = 12/251 (4%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P+ +Y LI + ++ A +++E+M+ + + +T+++ GL G+ +A +
Sbjct: 7 PNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEH 66
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF----R 123
+ M + C PD Y A + C A + +A G++ EM+ +G +P+ T++ +
Sbjct: 67 FRAMAK-DCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCK 125
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCM--FLVKLCKRQEKVEIALQLWNDMVEKGF 181
R ++ R MG N+ + + +LC + VE+A ++ ++ KGF
Sbjct: 126 FGSEEQAFRVLEDVIQRGMG-----NSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGF 180
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQN 241
+L+ +++ + C L A K MIEKG P+ +F + + AN+ Q
Sbjct: 181 TPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQ 240
Query: 242 LSNKMALFGPS 252
L KM G S
Sbjct: 241 LLEKMVTGGCS 251
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 92/198 (46%), Gaps = 7/198 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKM---RDEDISPDVISYTSIIGGLGL 57
M G D + YN +++ + + KA ++E++ RD +P + +++ L
Sbjct: 456 MAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQ 515
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
VG+ D A+ +L +M E G ++YN + +R +A+ + + MV G +P +T
Sbjct: 516 VGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEIST 575
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
N+ + + ++ L RM GC P+ ++C L+ + + ++A +L +M
Sbjct: 576 VNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMT 635
Query: 178 EKGFGSYILVSDVLFDLL 195
E G +D DLL
Sbjct: 636 EAGLEP----NDTTHDLL 649
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 95/256 (37%), Gaps = 38/256 (14%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PD+ +Y LI YCK + + ++VE+M + P V + ++++GGL ++A
Sbjct: 390 GFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERA 449
Query: 65 RDVLKEMKEYGCYPDAAAYN--------------------------------------AA 86
+ M GC DA YN A
Sbjct: 450 IQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVDAL 509
Query: 87 IRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGC 146
+ + C R DA L+ +M E+G + ++YN + ++ M+ G
Sbjct: 510 VESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSAGP 569
Query: 147 LPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEK 206
P + ++ KV+ A +L M + G I + L C G+ A K
Sbjct: 570 APEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARK 629
Query: 207 SFLEMIEKGHKPSQVS 222
EM E G +P+ +
Sbjct: 630 LLEEMTEAGLEPNDTT 645
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 76/184 (41%), Gaps = 8/184 (4%)
Query: 76 CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSW 135
C P+ Y IR + A L A L++EM G NA + + + + +
Sbjct: 5 CMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEAL 64
Query: 136 NLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLL 195
+ R M C P+ + LV + K + A + +M+ +G + L D L
Sbjct: 65 EHF-RAMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGL 123
Query: 196 CDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMAL-----FG 250
C G +A + ++I++G S +F I + L NK +++ S + + F
Sbjct: 124 CKFGSEEQAFRVLEDVIQRGMGNSDAAFETI--IQRLCNKYNSVELASKVLGVVIAKGFT 181
Query: 251 PSMI 254
P+++
Sbjct: 182 PTVL 185
>gi|302784232|ref|XP_002973888.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
gi|300158220|gb|EFJ24843.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
Length = 399
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 111/229 (48%), Gaps = 4/229 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDE-DISPDVISYTSIIGGLGLVG 59
M+ M PD +YN +I +CK ++++AY +E+M+ SPD +Y+ +I GL
Sbjct: 147 MQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSS 206
Query: 60 QPDKARDVLKEM-KEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
KA ++L+EM C A+N + YC A+ L A L+ M+E G +P+ TY
Sbjct: 207 NLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTY 266
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMV 177
+ D+ + L +M+ GC P+ + LV LCK + VE A +L M+
Sbjct: 267 STIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVE-ACRLVKRML 325
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
E G + ++FD LC + KL A + +KG V+F +
Sbjct: 326 EDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRITDVVAFEAL 374
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 120/262 (45%), Gaps = 40/262 (15%)
Query: 1 MREM----GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLG 56
+REM G+ P YN + CK +V +A ++V+ M+D PDV+++ ++I GL
Sbjct: 41 LREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVVTFNTLIAGLC 100
Query: 57 LVGQPDKARDVLKEMKEYG--------------------------------CYPDAAAYN 84
G+ D+A+ VL EM+ G PD YN
Sbjct: 101 KAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLVMQGMTTTPDTQTYN 160
Query: 85 AAIRNYCIAKRLRDASGLMDEMVEK-GLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMG 143
A I +C + + A G ++EM ++ G SP+ TY++ S++LR + L M+G
Sbjct: 161 AIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIG 220
Query: 144 -TGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKL 201
C + + LV CK Q+ ++ A +L + M+E G ++ + D LC G +
Sbjct: 221 RKDCCASVVAFNTLVDGYCKAQD-LDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDV 279
Query: 202 VEAEKSFLEMIEKGHKPSQVSF 223
+ +M+ +G KP V++
Sbjct: 280 DKGFALLEKMVSRGCKPDVVTY 301
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 57/98 (58%), Gaps = 2/98 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G KPD+V+Y L+ CK ++ +A ++V++M ++ +P+ ++Y+ + GL + +
Sbjct: 289 MVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDK 348
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRD 98
D A D+L +++ G D A+ A + + + KRL D
Sbjct: 349 LDMANDLLTSIRDKGRITDVVAFEALLLS--VKKRLLD 384
>gi|255544732|ref|XP_002513427.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547335|gb|EEF48830.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 567
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 123/249 (49%), Gaps = 5/249 (2%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G KPD+V L+ CK +++KA +++E M I PD SYT ++ L G A
Sbjct: 92 GHKPDVVQATQLLYDLCKSNKMKKAIRVMEMMISCGIIPDAASYTFLVNHLCKRGNVGYA 151
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++++M++ G + YN ++ C+ L + +D +++KGL PNA TY+
Sbjct: 152 MQLVEKMEDSGYPANTVTYNTLVKGLCMHGNLNKSLQFLDRLMQKGLVPNAFTYSSLLEA 211
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSC-MFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
Y + + L ++ G PN S + L LCK + ++E A++L+ ++ KGF
Sbjct: 212 AYKERGVNEAMRLLDEIIAKGGQPNLVSYNVLLTGLCK-EGRIEEAIRLFKNLPSKGFSP 270
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANK-QEALQNL 242
++ ++L LC G+ EA + EM + PS V++ + + K ++ALQ +
Sbjct: 271 NVVSYNILLRSLCYEGRWEEANELLAEMNGRERSPSIVTYNILIGSLAFHGKIEQALQVI 330
Query: 243 SNKMALFGP 251
M GP
Sbjct: 331 DEMM--MGP 337
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 118/246 (47%), Gaps = 1/246 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ PD SY L++ CK V A ++VEKM D + ++Y +++ GL + G +K+
Sbjct: 127 GIIPDAASYTFLVNHLCKRGNVGYAMQLVEKMEDSGYPANTVTYNTLVKGLCMHGNLNKS 186
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
L + + G P+A Y++ + + + +A L+DE++ KG PN +YN+
Sbjct: 187 LQFLDRLMQKGLVPNAFTYSSLLEAAYKERGVNEAMRLLDEIIAKGGQPNLVSYNVLLTG 246
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + L+ + G PN S L++ + + E A +L +M +
Sbjct: 247 LCKEGRIEEAIRLFKNLPSKGFSPNVVSYNILLRSLCYEGRWEEANELLAEMNGRERSPS 306
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSN 244
I+ ++L L GK+ +A + EM+ KP+ S+ I A + K EA+ N +
Sbjct: 307 IVTYNILIGSLAFHGKIEQALQVIDEMMMGPFKPTATSYNPIIARLCKEGKVEAVVNCLD 366
Query: 245 KMALFG 250
+M +FG
Sbjct: 367 QM-IFG 371
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 97/202 (48%)
Query: 22 KDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAA 81
+D ++ A+ +E + PDV+ T ++ L + KA V++ M G PDAA
Sbjct: 74 RDMRISDAFFHLEHIVKNGHKPDVVQATQLLYDLCKSNKMKKAIRVMEMMISCGIIPDAA 133
Query: 82 AYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRM 141
+Y + + C + A L+++M + G N TYN + +L S R+
Sbjct: 134 SYTFLVNHLCKRGNVGYAMQLVEKMEDSGYPANTVTYNTLVKGLCMHGNLNKSLQFLDRL 193
Query: 142 MGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKL 201
M G +PN + L++ ++ V A++L ++++ KG ++ +VL LC G++
Sbjct: 194 MQKGLVPNAFTYSSLLEAAYKERGVNEAMRLLDEIIAKGGQPNLVSYNVLLTGLCKEGRI 253
Query: 202 VEAEKSFLEMIEKGHKPSQVSF 223
EA + F + KG P+ VS+
Sbjct: 254 EEAIRLFKNLPSKGFSPNVVSY 275
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 104/231 (45%), Gaps = 19/231 (8%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G P++VSYN L+ C + + E+A +++ +M + SP +++Y +IG L G+ ++A
Sbjct: 267 GFSPNVVSYNILLRSLCYEGRWEEANELLAEMNGRERSPSIVTYNILIGSLAFHGKIEQA 326
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
V+ EM P A +YN I C ++ +D+M+ SPN T+N V
Sbjct: 327 LQVIDEMMMGPFKPTATSYNPIIARLCKEGKVEAVVNCLDQMIFGRCSPNEGTFNA-IAV 385
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQ---------SCMFLVKLCKRQEKVEIALQLWND 175
+ ++ +++L + G N+ SC LCK+ L L+ +
Sbjct: 386 LCYEGKVQEAFSL---IQSLGNKQNSSIHDYYKGVVSC-----LCKKGNTYPAFLLLY-E 436
Query: 176 MVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
M + GF L LC G L EA + F + E ++P +F +
Sbjct: 437 MTKYGFTPDSYTYSSLIRGLCIEGMLYEAMEIFKLLEEDHYRPDIDNFNAL 487
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 57/109 (52%)
Query: 13 YNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMK 72
Y ++ CK A+ ++ +M +PD +Y+S+I GL + G +A ++ K ++
Sbjct: 414 YKGVVSCLCKKGNTYPAFLLLYEMTKYGFTPDSYTYSSLIRGLCIEGMLYEAMEIFKLLE 473
Query: 73 EYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
E PD +NA I +C + R + + + M+EKG +P+ TTY +
Sbjct: 474 EDHYRPDIDNFNALILGFCKSHRTDLSLEVFEMMIEKGYTPSETTYTIL 522
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 80/169 (47%), Gaps = 1/169 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P+ ++N I V C + +V++A+ +++ + ++ S Y ++ L G A +
Sbjct: 375 PNEGTFNA-IAVLCYEGKVQEAFSLIQSLGNKQNSSIHDYYKGVVSCLCKKGNTYPAFLL 433
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L EM +YG PD+ Y++ IR CI L +A + + E P+ +N F
Sbjct: 434 LYEMTKYGFTPDSYTYSSLIRGLCIEGMLYEAMEIFKLLEEDHYRPDIDNFNALILGFCK 493
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDM 176
S+ S ++ M+ G P+ + LV+ +E+ E+A ++ ++
Sbjct: 494 SHRTDLSLEVFEMMIEKGYTPSETTYTILVEGIIHEEEKELAAEVLREL 542
Score = 40.4 bits (93), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 41/72 (56%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+ E +PDI ++N LI +CK + + + ++ E M ++ +P +YT ++ G+ +
Sbjct: 472 LEEDHYRPDIDNFNALILGFCKSHRTDLSLEVFEMMIEKGYTPSETTYTILVEGIIHEEE 531
Query: 61 PDKARDVLKEMK 72
+ A +VL+E+
Sbjct: 532 KELAAEVLRELH 543
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 42/87 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G PD +Y+ LI C + + +A +I + + ++ PD+ ++ ++I G +
Sbjct: 437 MTKYGFTPDSYTYSSLIRGLCIEGMLYEAMEIFKLLEEDHYRPDIDNFNALILGFCKSHR 496
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAI 87
D + +V + M E G P Y +
Sbjct: 497 TDLSLEVFEMMIEKGYTPSETTYTILV 523
>gi|358346502|ref|XP_003637306.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
gi|355503241|gb|AES84444.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
Length = 603
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 111/222 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E G+ P+ +Y LID +CK E+AY ++ M E SP++ +Y +I+ GL G+
Sbjct: 372 MKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGR 431
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A +L++ + G PD YN + +C + +R A L ++M++ G+ P+ +Y
Sbjct: 432 VQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTT 491
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
VF N ++ S + + G +P ++ ++ R+ + +A++ ++ + + G
Sbjct: 492 LIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHG 551
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
+ + LC K EA + MIEKG P +V+
Sbjct: 552 CAPDSITYGAIISGLCKQSKRDEARSLYDSMIEKGLVPCEVT 593
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 128/262 (48%), Gaps = 5/262 (1%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
+MG++P+++++ C+I+ CK +++A++++E+M + P+V ++TS+I GL G +
Sbjct: 268 DMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTE 327
Query: 63 KA-RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
KA R LK ++ P+ Y A I YC +L A L+ M E+GL PN TY
Sbjct: 328 KAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTL 387
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKG 180
+ + +++L M G PN + +V LCKR +V+ A ++ D + G
Sbjct: 388 IDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRG-RVQEAYKMLEDGFQNG 446
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
++L C + +A F +M++ G +P S+ + A+ N+ + +
Sbjct: 447 LKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESE 506
Query: 241 NLSNKMALFGPSMIPKREEYLA 262
+ G +IP + Y +
Sbjct: 507 MFFEEAVRIG--IIPTNKTYTS 526
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 122/246 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+R KP++++Y +I YC++ ++ +A ++ +M+++ + P+ +YT++I G G
Sbjct: 337 VRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGN 396
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A D++ M G P+ YNA + C R+++A ++++ + GL P+ TYN+
Sbjct: 397 FERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNI 456
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++R + L+ +M+ G P+ S L+ + R+ +++ + + + V G
Sbjct: 457 LMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIG 516
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ C G L A K F + + G P +++ I + + +K++ +
Sbjct: 517 IIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEAR 576
Query: 241 NLSNKM 246
+L + M
Sbjct: 577 SLYDSM 582
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 113/281 (40%), Gaps = 42/281 (14%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV+PD +SY ++ +YCK + +A K + M + D ++T II G +A
Sbjct: 200 GVQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRA 259
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF--- 121
+ + + G P+ + I C ++ A +++EMV KG PN T+
Sbjct: 260 LWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDG 319
Query: 122 ----------FRVF----------------------YWSND-LRSSWNLYCRMMGTGCLP 148
FR+F Y D L + L RM G +P
Sbjct: 320 LCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVP 379
Query: 149 NTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSF 208
NT + L+ + E A L N M +GF + + + + LC G++ EA K
Sbjct: 380 NTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKML 439
Query: 209 LEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALF 249
+ + G KP + ++ LM KQE N+ +ALF
Sbjct: 440 EDGFQNGLKPDKFTY---NILMSEHCKQE---NIRQALALF 474
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 106/213 (49%), Gaps = 7/213 (3%)
Query: 15 CLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEY 74
C+++ + + ++++A ++V +M ++ + P+ + II +G + A + +EM
Sbjct: 140 CMVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVR 199
Query: 75 GCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSN-DLRS 133
G PD+ +Y + YC + +A + M+E+G + T+ L F R+
Sbjct: 200 GVQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRA 259
Query: 134 SWNLYCRMMGTGCLPN--TQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVL 191
W + R++ G PN +CM + LCKR ++ A ++ +MV KG+ + L
Sbjct: 260 LW-YFRRLVDMGLEPNLINFTCM-IEGLCKRG-SIKQAFEMLEEMVGKGWKPNVYTHTSL 316
Query: 192 FDLLCDMGKLVEAEKSFLEMIE-KGHKPSQVSF 223
D LC G +A + FL+++ + HKP+ +++
Sbjct: 317 IDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTY 349
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 41/88 (46%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
+G+ P +Y +I YC++ + A K ++ D +PD I+Y +II GL + D+
Sbjct: 515 IGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDE 574
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYC 91
AR + M E G P YC
Sbjct: 575 ARSLYDSMIEKGLVPCEVTRITLAYEYC 602
Score = 40.4 bits (93), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 47/96 (48%)
Query: 131 LRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDV 190
L+ + + M G +PNT++ +++K+ VE A L+ +M +G + V
Sbjct: 151 LKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRGVQPDSISYRV 210
Query: 191 LFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + C +G ++EA+K M+E+G +F I
Sbjct: 211 MVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLI 246
>gi|413918448|gb|AFW58380.1| hypothetical protein ZEAMMB73_073366 [Zea mays]
Length = 414
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 107/206 (51%), Gaps = 1/206 (0%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
PD+ S+N +I C+ ++KA ++VE+M + SPD I+ ++ GL V Q +K +
Sbjct: 79 SPDVWSFNVVIKGVCRVGNLQKALELVERMTEFGCSPDTITQNILVDGLCRVKQVNKGHE 138
Query: 67 VLKEMKEYG-CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
VL+ ++ G C P+ Y + I YC A R++DA + ++M++ G PN TYN+ +
Sbjct: 139 VLRRLQRDGVCMPNVVTYTSVISGYCKAGRMKDAFSVYNDMLQSGTRPNTVTYNVLINGY 198
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ D+ S+ +Y +++ C P+ + L+ R +++ A+++W +M + +
Sbjct: 199 GKALDMESAVRMYWQLILHSCPPDVVTFNSLIDGYCRCGQLDDAMRIWMEMGQHHIQPNV 258
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEM 211
++ LC + EA E+
Sbjct: 259 YTFSIIIHSLCTQNRSAEALSLLREL 284
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 105/230 (45%), Gaps = 12/230 (5%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKM-RDEDISPDVISYTSIIGGLGLVG 59
M E G PD ++ N L+D C+ +QV K ++++ ++ RD P+V++YTS+I G G
Sbjct: 108 MTEFGCSPDTITQNILVDGLCRVKQVNKGHEVLRRLQRDGVCMPNVVTYTSVISGYCKAG 167
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ A V +M + G P+ YN I Y A + A + +++ P+ T+N
Sbjct: 168 RMKDAFSVYNDMLQSGTRPNTVTYNVLINGYGKALDMESAVRMYWQLILHSCPPDVVTFN 227
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEI-----ALQLW 173
+ L + ++ M PN + ++ LC + E L +
Sbjct: 228 SLIDGYCRCGQLDDAMRIWMEMGQHHIQPNVYTFSIIIHSLCTQNRSAEALSLLRELNMR 287
Query: 174 NDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
D+V + F + + + D+LC GK+ EA +M EKG P + ++
Sbjct: 288 ADIVPQTF-----IYNPIIDILCKGGKVDEANLIVTDMEEKGCHPDKYTY 332
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 116/241 (48%), Gaps = 4/241 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEK-MRDEDISPDVISYTSIIGGLGLVGQPDK 63
G + + +YN L++ + + A + E ++D SPDV S+ +I G+ VG K
Sbjct: 41 GCRIEWYAYNNLLNTLIAHGRAQDAVALFESWIQDGLYSPDVWSFNVVIKGVCRVGNLQK 100
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLS-PNATTYNLFF 122
A ++++ M E+GC PD N + C K++ ++ + G+ PN TY
Sbjct: 101 ALELVERMTEFGCSPDTITQNILVDGLCRVKQVNKGHEVLRRLQRDGVCMPNVVTYTSVI 160
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
+ + ++ ++++Y M+ +G PNT + L+ + +E A++++ ++
Sbjct: 161 SGYCKAGRMKDAFSVYNDMLQSGTRPNTVTYNVLINGYGKALDMESAVRMYWQLILHSCP 220
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNL 242
++ + L D C G+L +A + ++EM + +P+ +F I + L + + + L
Sbjct: 221 PDVVTFNSLIDGYCRCGQLDDAMRIWMEMGQHHIQPNVYTFSII--IHSLCTQNRSAEAL 278
Query: 243 S 243
S
Sbjct: 279 S 279
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 73/143 (51%), Gaps = 1/143 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD+V++N LID YC+ Q++ A +I +M I P+V +++ II L + +A +
Sbjct: 221 PDVVTFNSLIDGYCRCGQLDDAMRIWMEMGQHHIQPNVYTFSIIIHSLCTQNRSAEALSL 280
Query: 68 LKEMK-EYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
L+E+ P YN I C ++ +A+ ++ +M EKG P+ TY +
Sbjct: 281 LRELNMRADIVPQTFIYNPIIDILCKGGKVDEANLIVTDMEEKGCHPDKYTYTILIIGHC 340
Query: 127 WSNDLRSSWNLYCRMMGTGCLPN 149
+ + L+ +M+ TGC P+
Sbjct: 341 MKGRIPEAVTLFHKMVETGCRPD 363
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 84/181 (46%), Gaps = 1/181 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G +P+ V+YN LI+ Y K +E A ++ ++ PDV+++ S+I G GQ
Sbjct: 179 MLQSGTRPNTVTYNVLINGYGKALDMESAVRMYWQLILHSCPPDVVTFNSLIDGYCRCGQ 238
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEM-VEKGLSPNATTYN 119
D A + EM ++ P+ ++ I + C R +A L+ E+ + + P YN
Sbjct: 239 LDDAMRIWMEMGQHHIQPNVYTFSIIIHSLCTQNRSAEALSLLRELNMRADIVPQTFIYN 298
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ + + + M GC P+ + L+ + ++ A+ L++ MVE
Sbjct: 299 PIIDILCKGGKVDEANLIVTDMEEKGCHPDKYTYTILIIGHCMKGRIPEAVTLFHKMVET 358
Query: 180 G 180
G
Sbjct: 359 G 359
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 54/98 (55%), Gaps = 6/98 (6%)
Query: 1 MREMGVKPDIVS----YNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLG 56
+RE+ ++ DIV YN +ID+ CK +V++A IV M ++ PD +YT +I G
Sbjct: 281 LRELNMRADIVPQTFIYNPIIDILCKGGKVDEANLIVTDMEEKGCHPDKYTYTILIIGHC 340
Query: 57 LVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAK 94
+ G+ +A + +M E GC PD N+ I C+ K
Sbjct: 341 MKGRIPEAVTLFHKMVETGCRPDNITINSFIS--CVLK 376
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 83/183 (45%), Gaps = 2/183 (1%)
Query: 43 PDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGL 102
PD ++ + G G D A ++L + +GC + AYN + R +DA L
Sbjct: 9 PDAGFFSFVAGSCTNAGLLDAAANLLTKGSWFGCRIEWYAYNNLLNTLIAHGRAQDAVAL 68
Query: 103 MDEMVEKGL-SPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCK 161
+ ++ GL SP+ ++N+ + +L+ + L RM GC P+T + LV
Sbjct: 69 FESWIQDGLYSPDVWSFNVVIKGVCRVGNLQKALELVERMTEFGCSPDTITQNILVDGLC 128
Query: 162 RQEKVEIALQLWNDMVEKGFG-SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQ 220
R ++V ++ + G ++ + C G++ +A + +M++ G +P+
Sbjct: 129 RVKQVNKGHEVLRRLQRDGVCMPNVVTYTSVISGYCKAGRMKDAFSVYNDMLQSGTRPNT 188
Query: 221 VSF 223
V++
Sbjct: 189 VTY 191
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 32/68 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G PD +Y LI +C ++ +A + KM + PD I+ S I + G
Sbjct: 320 MEEKGCHPDKYTYTILIIGHCMKGRIPEAVTLFHKMVETGCRPDNITINSFISCVLKAGM 379
Query: 61 PDKARDVL 68
P++ ++
Sbjct: 380 PNEVHQIM 387
>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
Length = 816
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 109/231 (47%), Gaps = 9/231 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E V PD SY LID K ++ A + +K+ ++P ++YTS+I GL +
Sbjct: 314 MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 373
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D AR++ +M GC P YN I C L +A L+ +M+E G P+ TYN
Sbjct: 374 FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 433
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSC-MFLVKLCKRQE--------KVEIALQ 171
S+ + + L+ M GC PN +S ++ LC++ + K++ A +
Sbjct: 434 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFR 493
Query: 172 LWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
L M + G ++ L LC + ++ +A +M+++ KP+ V+
Sbjct: 494 LLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVT 544
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 110/238 (46%), Gaps = 11/238 (4%)
Query: 1 MREMGVKPDIVSYNCLI---------DVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSI 51
M +G P+ S+N +I D C+ ++++A++++++M D+ PDV++Y+++
Sbjct: 454 MERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTL 513
Query: 52 IGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGL 111
I GL + + D AR +L++M + C P N I C A R+++A ++D MV G
Sbjct: 514 ISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQ 573
Query: 112 SPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIAL 170
SP+ TYN + + L M+ G PN + LV LCK E A
Sbjct: 574 SPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPE-AC 632
Query: 171 QLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKA 228
++ M G + L C G++ K F EM+ G P V + + A
Sbjct: 633 GVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAA 690
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 130/266 (48%), Gaps = 10/266 (3%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
RE +P +V+ N L++ +C QV+KA +++ M DE+ +PD +SY +++ GL G+
Sbjct: 204 RENRREPCLVTLNVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRV 263
Query: 62 DKA------RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNA 115
++A R++ P YN I C R+ +A + ++M E+ +SP++
Sbjct: 264 EEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDS 323
Query: 116 TTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWND 175
+Y + + L + NL+ +++ +G P+T + L+ + A +L+ D
Sbjct: 324 WSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFAD 383
Query: 176 MVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI-KALMELAN 234
M +G + +V+ D C G L EA +MIE GH P V++ + L + +
Sbjct: 384 MNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSR 443
Query: 235 KQEALQNLSNKMALFGPSMIPKREEY 260
+EAL L N+M G + P R +
Sbjct: 444 VEEALL-LFNEMERLGCT--PNRRSH 466
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 115/244 (47%), Gaps = 12/244 (4%)
Query: 12 SYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEM 71
YN +I C++ ++++A ++ EKM + ++SPD SY +I GL G+ + AR++ +++
Sbjct: 290 GYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKL 349
Query: 72 KEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDL 131
G P AY + I C+A DA L +M +G P+ TYN+ L
Sbjct: 350 LHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGML 409
Query: 132 RSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKG-------FGS 183
+ +L +M+ G +P+ + + LCK +VE AL L+N+M G +
Sbjct: 410 EEACDLIKKMIEDGHVPDVVTYNTVMDGLCK-SSRVEEALLLFNEMERLGCTPNRRSHNT 468
Query: 184 YI--LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQ 240
I L D C GKL EA + M + GH P V++ I L +A +A
Sbjct: 469 IILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARH 528
Query: 241 NLSN 244
L +
Sbjct: 529 LLED 532
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 76/182 (41%), Gaps = 4/182 (2%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ P++V+Y L+ CK ++ +A + +M+ +P++ +YT++I G GQ D
Sbjct: 607 GLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGG 666
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSP--NATTYNLFF 122
+ EM G PD Y C + R A ++ E E S Y
Sbjct: 667 LKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAV 726
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGF 181
+ + + M+ G LP + C LV LCK + E A + ++++ +
Sbjct: 727 DGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGE-ARAVLEEIMDLAY 785
Query: 182 GS 183
G
Sbjct: 786 GG 787
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 71/331 (21%), Positives = 114/331 (34%), Gaps = 106/331 (32%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD+ YN LID K ++ E K+V+ M D PD ++T+I+ GL G+ D+A V
Sbjct: 44 PDV--YNVLIDSLSKRQETEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELV 101
Query: 68 LKEMKEYGCYP-------------------------------DAAAYNAAIRNYCIAKRL 96
+ EM+ P +++AYN + C A R+
Sbjct: 102 MDEMRSRMIPPYFATSSFLAHELCLRGSMERAFQLLEIMPVANSSAYNIVVVALCKAARV 161
Query: 97 RDA----------------------------SGLMDEMV----EKGLSPNATTYNLFFRV 124
DA SG +DE + E P T N+
Sbjct: 162 DDALELARTMSEKRIPLAAGSLDSVLVGLMDSGRIDEALQVYRENRREPCLVTLNVLLEG 221
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCK---------------------- 161
F + + L M C P+ S C L LCK
Sbjct: 222 FCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSS 281
Query: 162 ------------------RQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVE 203
+ ++++ A+Q++ M E+ +L D L GKL +
Sbjct: 282 SSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLND 341
Query: 204 AEKSFLEMIEKGHKPSQVSFRRIKALMELAN 234
A F +++ G PS V++ + + +AN
Sbjct: 342 ARNLFQKLLHSGVTPSTVAYTSLIHGLCMAN 372
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 92/214 (42%), Gaps = 13/214 (6%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRD-EDISPDVISYTSIIGGLGLVG 59
M + G+ P + + +I +C + +A KI M + PDV Y +I L
Sbjct: 1 MFQQGIFPAPLLFTSVIQGWCNVGRTFEAVKIFSLMEECHSPYPDV--YNVLIDSLSKRQ 58
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ + + +++ M + GC+PD+ + + C A ++ +A +MDEM + + P T +
Sbjct: 59 ETEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSS 118
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMF---LVKLCKRQEKVEIALQLWNDM 176
+ ++ L M P S + +V LCK +V+ AL+L M
Sbjct: 119 FLAHELCLRGSMERAFQLLEIM------PVANSSAYNIVVVALCK-AARVDDALELARTM 171
Query: 177 VEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLE 210
EK D + L D G++ EA + + E
Sbjct: 172 SEKRIPLAAGSLDSVLVGLMDSGRIDEALQVYRE 205
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 55/116 (47%), Gaps = 4/116 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G P++ +Y LI +C QV+ K+ +M ISPD + Y ++ L G+
Sbjct: 638 MKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGR 697
Query: 61 PDKARDVLKEMKE---YGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSP 113
+A ++L+E +E + D Y A+ A ++ A G + +MV G P
Sbjct: 698 SARALEILREGRESLRSEAWGD-EVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLP 752
>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 675
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 117/224 (52%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G++P +V+YN ++D +CK +V++A +++ +M+ P+ ++Y ++ GL G+
Sbjct: 181 MVECGIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGE 240
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN- 119
++A+++++EM G A Y+ IR YC +L +AS L +EM+ +G P TYN
Sbjct: 241 LEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNT 300
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ + + W + + L M+ +P+ S L+ R + A L+ ++ +
Sbjct: 301 IMYGLCKWGR-VSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFR 359
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G ++ + L D LC MG L A + EMI+ G P +F
Sbjct: 360 GLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTF 403
Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 120/242 (49%), Gaps = 3/242 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISY-TSIIGGLGLVG 59
M + G PD+ ++ L+ +CK + A ++ ++M + + PD +Y T I+G L L G
Sbjct: 391 MIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKL-G 449
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
P KA + +EM G PD YN I L++AS L+ +M+ GL P+ TY
Sbjct: 450 DPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYT 509
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ LR + ++ M+ G P+ + L+ + ++++A+ + +M EK
Sbjct: 510 SIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEK 569
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEA 238
G ++ + L + LC + K+ +A K F EM KG P++ ++ I L + QEA
Sbjct: 570 GVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEA 629
Query: 239 LQ 240
L+
Sbjct: 630 LR 631
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 126/256 (49%), Gaps = 2/256 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++MG P+ V+YN L++ ++E+A +++++M + +Y +I G GQ
Sbjct: 216 MQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQ 275
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + +EM G P YN + C R+ DA L+D MV K L P+ +YN
Sbjct: 276 LDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNT 335
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ ++ L+ + G +P+ + L+ R +++A++L ++M++ G
Sbjct: 336 LIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHG 395
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF-RRIKALMELANKQEAL 239
+ +L C +G L A++ F EM+ +G +P + ++ RI ++L + +A
Sbjct: 396 PDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAF 455
Query: 240 QNLSNKMAL-FGPSMI 254
+A F P +I
Sbjct: 456 GMQEEMLARGFPPDLI 471
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 115/248 (46%), Gaps = 2/248 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G++PD +Y I K KA+ + E+M PD+I+Y I GL +G
Sbjct: 426 MLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGN 485
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A +++K+M G PD Y + I + +A LR A + EM+ KG+ P+ TY +
Sbjct: 486 LKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTV 545
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+ L+ + + M G PN + L+ LCK + K++ A + + +M K
Sbjct: 546 LIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVR-KMDQAYKFFTEMQAK 604
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
G +L + C++G EA + + +M+++ +P + + + K +
Sbjct: 605 GISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHSALLKHLNKDYKSHVV 664
Query: 240 QNLSNKMA 247
++L N +A
Sbjct: 665 RHLENVIA 672
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 101/233 (43%), Gaps = 12/233 (5%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
R+ G K ++Y ++D+ ++ + AY ++EK+ + V+ + L + +
Sbjct: 73 RQTGFKRSELTYAVILDILARNGLMRSAYCVMEKVVSVKMENGVVDVLILDLLLWIYAKK 132
Query: 62 ---DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDAS-----GLMDEMVEKGLSP 113
+K V +M G PD N +R R RD+S + + MVE G+ P
Sbjct: 133 SMLEKCLLVFYKMVSKGMLPDLKNCNRVLR----LLRDRDSSIDVAREVYNVMVECGIRP 188
Query: 114 NATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLW 173
TYN F ++ + L +M GCLPN + LV ++E A +L
Sbjct: 189 TVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELI 248
Query: 174 NDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+M+ G D L C+ G+L EA + EM+ +G P+ V++ I
Sbjct: 249 QEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTI 301
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 99/223 (44%), Gaps = 2/223 (0%)
Query: 19 VYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGL-GLVGQPDKARDVLKEMKEYGCY 77
+Y K +EK + KM + + PD+ + ++ L D AR+V M E G
Sbjct: 128 IYAKKSMLEKCLLVFYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIR 187
Query: 78 PDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNL 137
P YN + ++C ++++A L+ +M + G PN TYN+ S +L + L
Sbjct: 188 PTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKEL 247
Query: 138 YCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCD 197
M+ G + + L++ + +++ A +L +M+ +G ++ + + LC
Sbjct: 248 IQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCK 307
Query: 198 MGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
G++ +A K M+ K P VS+ I L N EA
Sbjct: 308 WGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAF 350
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 62/115 (53%), Gaps = 1/115 (0%)
Query: 137 LYCRMMGTGCLPNTQSCMFLVKLCK-RQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLL 195
++ +M+ G LP+ ++C +++L + R +++A +++N MVE G ++ + + D
Sbjct: 141 VFYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIRPTVVTYNTMLDSF 200
Query: 196 CDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFG 250
C GK+ EA + L+M + G P+ V++ + + + + E + L +M G
Sbjct: 201 CKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRLG 255
>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/228 (32%), Positives = 109/228 (47%), Gaps = 1/228 (0%)
Query: 12 SYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEM 71
+Y ++ C ++ AY IV++M P+V+ YT++I + A VLKEM
Sbjct: 419 TYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM 478
Query: 72 KEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDL 131
KE G PD YN+ I AKR+ +A + EMVE GL PNA TY F + +++
Sbjct: 479 KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEF 538
Query: 132 RSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVL 191
S+ M G LPN C L+ ++EKV A + MV++G VL
Sbjct: 539 ASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVL 598
Query: 192 FDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEA 238
+ L K+ +AE+ F EM KG P S+ I +L N Q+A
Sbjct: 599 MNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKA 646
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 127/273 (46%), Gaps = 9/273 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ D +Y L++ K+ +V+ A +I +MR + I+PDV SY +I G +G
Sbjct: 583 MVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGN 642
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA + EM E G P+ YN + +C + + A L+DEM KGL PNA TY
Sbjct: 643 MQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCT 702
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ S DL ++ L+ M G +P++ LV C R VE A+ ++ +KG
Sbjct: 703 IIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTN-KKG 761
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGH-----KPSQVSFRRIKALMELANK 235
S + L + + GK E + L + G KP+ V++ + +
Sbjct: 762 CASSTAPFNALINWVFKFGK-TELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGN 820
Query: 236 QEALQNLSNKMALFGPSMIPKREEYLAEMSASD 268
EA + L ++M +++P Y + ++ D
Sbjct: 821 LEAAKELFHQMQ--NANLMPTVITYTSLLNGYD 851
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 120/246 (48%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G +P++V Y LI + ++ + A +++++M+++ I+PD+ Y S+I GL + D+A
Sbjct: 447 GCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEA 506
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
R L EM E G P+A Y A I Y A A + EM E G+ PN
Sbjct: 507 RSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINE 566
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + + + Y M+ G L + ++ L+ + +KV+ A +++ +M KG
Sbjct: 567 YCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPD 626
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSN 244
+ VL + +G + +A F EM+E+G P+ + + + + + E + L +
Sbjct: 627 VFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLD 686
Query: 245 KMALFG 250
+M++ G
Sbjct: 687 EMSVKG 692
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 105/227 (46%), Gaps = 3/227 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MRE GV P+ V LI+ YCK +V +A M D+ I D +YT ++ GL +
Sbjct: 548 MRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDK 607
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A ++ +EM+ G PD +Y I + ++ AS + DEMVE+GL+PN YN+
Sbjct: 608 VDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNM 667
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEK 179
F S ++ + L M G PN + C + CK + E A +L+++M K
Sbjct: 668 LLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAE-AFRLFDEMKLK 726
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G V L D C + VE + +KG S F +
Sbjct: 727 GLVPDSFVYTTLVDGCCRLND-VERAITIFGTNKKGCASSTAPFNAL 772
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 112/223 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E G+ PDI YN LI K +++++A + +M + + P+ +Y + I G +
Sbjct: 478 MKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASE 537
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +KEM+E G P+ I YC +++ +A MV++G+ +A TY +
Sbjct: 538 FASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTV 597
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ + + ++ M G G P+ S L+ + ++ A ++++MVE+G
Sbjct: 598 LMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG 657
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+++ ++L C G++ +A++ EM KG P+ V++
Sbjct: 658 LTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTY 700
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 101/223 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +GV D +Y+ LID K R + A +V +M I+ Y I + G
Sbjct: 303 MDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGV 362
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA+ + M G P A AY + I YC K +R L+ EM ++ + + TY
Sbjct: 363 MEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGT 422
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ S DL ++N+ M+ +GC PN L+K + + A+++ +M E+G
Sbjct: 423 VVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG 482
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I + L L ++ EA +EM+E G KP+ ++
Sbjct: 483 IAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTY 525
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
KP+ V+YN +ID CK+ +E A ++ +M++ ++ P VI+YTS++ G +G+ +
Sbjct: 802 KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFP 861
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEK 109
V E G PD Y+ I + A L+D+M K
Sbjct: 862 VFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAK 904
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 87/218 (39%), Gaps = 2/218 (0%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
+ +KP + Y+C I V K+ +EKA + + M + P +Y S+I G +
Sbjct: 343 INIKPYM--YDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQ 400
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
++L EMK+ Y ++ C + L A ++ EM+ G PN Y +
Sbjct: 401 GYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIK 460
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
F ++ + + M G P+ L+ + ++++ A +MVE G
Sbjct: 461 TFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKP 520
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQV 221
+ + A+K EM E G P++V
Sbjct: 521 NAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKV 558
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 107/264 (40%), Gaps = 22/264 (8%)
Query: 1 MREMGVKPDIVSYNCLIDVYCK---------------------DRQVEKAYKIVEKMRDE 39
M E V D+ +Y+ LI +C+ V+ A K+ E M +
Sbjct: 212 MVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICK 271
Query: 40 DISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDA 99
+ P +Y +I GL + + + A+ +L EM G D Y+ I + A
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAA 331
Query: 100 SGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKL 159
GL+ EMV G++ Y+ V + + L+ M+ +G +P Q+ L++
Sbjct: 332 KGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEG 391
Query: 160 CKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
R++ V +L +M ++ + +C G L A EMI G +P+
Sbjct: 392 YCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPN 451
Query: 220 QVSFRR-IKALMELANKQEALQNL 242
V + IK ++ + +A++ L
Sbjct: 452 VVIYTTLIKTFLQNSRFGDAMRVL 475
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 48/98 (48%), Gaps = 5/98 (5%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPD-----VISYTSIIGGLGLVG 59
G++PD + Y+ +I+ + K+ KA +V++M ++ D + + +++ G VG
Sbjct: 870 GIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVG 929
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLR 97
+ + A V++ M PD+A I CI+ R
Sbjct: 930 EMEVAEKVMENMVRLQYIPDSATVIELINESCISSNQR 967
>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
Length = 650
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 107/218 (49%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
D ++Y L+ CK+ + KA I+E+ + D +Y+S+I GL G+ D+ VL
Sbjct: 393 DSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVL 452
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
+M ++GC P+ NA I + A +L DA MV KG P TYN +
Sbjct: 453 DQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKA 512
Query: 129 NDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVS 188
++ L M+ G PN + L+ + +K+++AL LW +EKGF + +
Sbjct: 513 ERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMH 572
Query: 189 DVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+++ LC GK+ +A + + EM ++ P+ V+ +
Sbjct: 573 NIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTL 610
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 111/232 (47%), Gaps = 1/232 (0%)
Query: 10 IVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLK 69
+VSYN LI ++ +V++A I E + ++D D ++Y ++ GL G +KA +L+
Sbjct: 359 VVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILE 418
Query: 70 EMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSN 129
E + D AY++ I C RL + +G++D+M + G PN N F ++
Sbjct: 419 EAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRAS 478
Query: 130 DLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSD 189
L + + M+ GC P + L+ + E+ A L +M+ KG+ ++
Sbjct: 479 KLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYS 538
Query: 190 VLFDLLCDMGKLVEAEKSFLEMIEKGHKPS-QVSFRRIKALMELANKQEALQ 240
+L + LC KL A + + +EKG KP ++ I L ++ALQ
Sbjct: 539 LLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQ 590
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 103/224 (45%), Gaps = 1/224 (0%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
G +P I SYN L++ + + ++A +SP++ +Y +I Q DK
Sbjct: 108 FGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDK 167
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
A+++L M E G PD +Y I + + DA L DEM E+G++P+ YN+
Sbjct: 168 AKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILID 227
Query: 124 VFYWSNDLRSSWNLYCRMM-GTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
F+ D+ ++ ++ R++ G PN S ++ + K + + ++W+ M + G
Sbjct: 228 GFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERG 287
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ L LC G L A + + EM E G P V + +
Sbjct: 288 QDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTM 331
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 99/223 (44%), Gaps = 1/223 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E GV PD+V YN +++ Y + ++E+ ++ + M E V+SY +I GL +
Sbjct: 316 MAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAK 374
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + + + E C D+ Y + C L A +++E + Y+
Sbjct: 375 VDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSS 434
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
L + +M GC PN C ++ R K+E AL+ + +MV KG
Sbjct: 435 MINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKG 494
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + L + L + EA EM+ KG KP+ +++
Sbjct: 495 CFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITY 537
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 83/178 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G KP+ N +I+ + + ++E A + M + P V++Y ++I GL +
Sbjct: 455 MTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAER 514
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++KEM G P+ Y+ + C K+L A L + +EKG P+ +N+
Sbjct: 515 FSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNI 574
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
S + + LY M C+PN + L++ + E A ++W+ +++
Sbjct: 575 IIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQ 632
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 99/251 (39%), Gaps = 38/251 (15%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVI-------------- 46
M E G PD+ SY LI+ K+ + A K+ ++M + ++PDV
Sbjct: 175 MWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGD 234
Query: 47 ----------------------SYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYN 84
SY +I GL G+ D++ ++ MK+ D Y+
Sbjct: 235 ILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYS 294
Query: 85 AAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGT 144
I C + L A+ + EM E G+SP+ YN + + + L+ M
Sbjct: 295 TLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKE 354
Query: 145 GCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEA 204
GC S L++ KV+ A+ +W + EK + + VL LC G L +A
Sbjct: 355 GC-RTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKA 413
Query: 205 EKSFLEMIEKG 215
S LE E G
Sbjct: 414 -LSILEEAENG 423
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 98/241 (40%), Gaps = 43/241 (17%)
Query: 24 RQVEKAYKIVEKMRDEDIS-PDVISYTSIIGGLGLVGQPDKARDVLKEMKE-YGCYPDAA 81
+ V +IVE +R + P+ ++ T +I PD+A D+ + M E +GC P
Sbjct: 57 KLVAHVSRIVELIRTQKCKCPEDVALT-VIKAYAKNSMPDQALDIFQRMHEIFGCQPGIR 115
Query: 82 AYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRM 141
+YN+ + + + +A GLSPN TYN+
Sbjct: 116 SYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNI--------------------- 154
Query: 142 MGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKL 201
L+K+ R+++ + A +L N M E+GF + L + L G +
Sbjct: 155 --------------LIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYM 200
Query: 202 VEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSN--KMALFGPSMIPKREE 259
+A K F EM E+G P + L++ K+ + N S + L GPS+ P
Sbjct: 201 SDALKLFDEMPERGVTPDVACYN---ILIDGFFKKGDILNASEIWERLLKGPSVYPNIPS 257
Query: 260 Y 260
Y
Sbjct: 258 Y 258
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 58/114 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G KP++++Y+ L++ C+ ++++ A + + ++ PDV + II GL G+
Sbjct: 525 MLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGK 584
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPN 114
+ A + EMK+ C P+ +N + + + AS + D +++ S N
Sbjct: 585 VEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQSWSSSN 638
>gi|413924892|gb|AFW64824.1| hypothetical protein ZEAMMB73_716034 [Zea mays]
Length = 721
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 110/224 (49%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR MG+ PD+++YN L++ YCK +++A ++ +R ++P V++Y ++I G +G
Sbjct: 369 MRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGD 428
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR + +EM E GC+PD Y + + L A DEM+ KGL P+ YN
Sbjct: 429 LAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNT 488
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+ ++ L MM G P+T + ++ LCK ++ A +L MV
Sbjct: 489 RICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCK-TGNLKDAKRLKTKMVSD 547
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G + L C+ G L EA K M+ G +PS V++
Sbjct: 548 GLQPDCITYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTY 591
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 109/258 (42%), Gaps = 35/258 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+R G+ P +++YN LID YC+ + +A ++ E+M ++ PDV +YT ++ G V
Sbjct: 404 LRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRN 463
Query: 61 PDKARDVLKEM-------------------------------KEY----GCYPDAAAYNA 85
AR+ EM +E G YPD YN
Sbjct: 464 LAMAREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNV 523
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
I C L+DA L +MV GL P+ TY LR + L M+ G
Sbjct: 524 IIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLREARKLLNGMVSDG 583
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
P+ + LV C R+ + A + M++ G + +VL LC G+ A
Sbjct: 584 LQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCMTGRTPLAF 643
Query: 206 KSFLEMIEKGHKPSQVSF 223
+ F EM+E+G P++ ++
Sbjct: 644 RHFHEMLERGLAPNKYTY 661
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 97/218 (44%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G++PD +YN I A+++ E M + I PD ++Y II GL G
Sbjct: 474 MLSKGLQPDCFAYNTRICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGN 533
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A+ + +M G PD Y I +C LR+A L++ MV GL P+ TY +
Sbjct: 534 LKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTI 593
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+L S++ + +M+ G PN + L+ + +A + +++M+E+G
Sbjct: 594 LVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCMTGRTPLAFRHFHEMLERG 653
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
+L D C G +A + + EM + G P
Sbjct: 654 LAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPP 691
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 102/228 (44%), Gaps = 10/228 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ P +V+YN +I K Q E A +MR + PDVI+Y S++ G
Sbjct: 334 MENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGN 393
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A +L +++ G P YN I YC L +A L +EMVE+G P+ TY +
Sbjct: 394 LKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTI 453
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLP-----NTQSCMFLVKLCKRQEKVEIALQLWND 175
+L + + M+ G P NT+ C L +A QL
Sbjct: 454 LMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELT-----LSSTPMAFQLREV 508
Query: 176 MVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
M+ KG + +V+ D LC G L +A++ +M+ G +P +++
Sbjct: 509 MMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITY 556
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 100/225 (44%), Gaps = 3/225 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDED--ISPDVISYTSIIGGLGLV 58
M ++ V+P IV+YN L+D + K+ + ++A ++++M + S + +++ +I L
Sbjct: 228 MLQLRVEPTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGFSLNDVTFNVVISFLARE 287
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
G + A ++ M+ + YN I +R A L EM +G+ P TY
Sbjct: 288 GHLENAVKLVDSMR-LSKKASSFTYNPLITALLERGFVRKAEALQMEMENEGIMPTVVTY 346
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
N ++ + M G LP+ + L+ + ++ AL L D+
Sbjct: 347 NAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRR 406
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G +L + L D C +G L EA + EM+E+G P ++
Sbjct: 407 AGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTY 451
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 101/237 (42%), Gaps = 2/237 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G + V++N +I ++ +E A K+V+ MR + +Y +I L G KA
Sbjct: 269 GFSLNDVTFNVVISFLAREGHLENAVKLVDSMRLSKKASS-FTYNPLITALLERGFVRKA 327
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ EM+ G P YNA I ++ A EM GL P+ TYN
Sbjct: 328 EALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNR 387
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + +L+ + L + G P + L+ R + A +L +MVE+G
Sbjct: 388 YCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPD 447
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEALQ 240
+ +L + + L A + F EM+ KG +P ++ RI A + L++ A Q
Sbjct: 448 VCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQ 504
>gi|168026089|ref|XP_001765565.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683203|gb|EDQ69615.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 505
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 117/243 (48%), Gaps = 3/243 (1%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD ++N LID K QVE+A + M ++SPDV +YT +I LG +G+ D +
Sbjct: 98 PDHTTFNILIDSLAKADQVEEACNVFGDMFKLNVSPDVYTYTILIRSLGTIGRIDAVMKL 157
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
+ M GC P+ Y++ + + A R+ +A + +MV+KGL P+A TYN+ F
Sbjct: 158 FESMTAQGCQPNLFTYHSVMHAFGSAGRVDEACDIFQQMVQKGLQPDAVTYNILIDAFGK 217
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ L +++ + + N + L+ R+ ++ ++L+ M KG S L
Sbjct: 218 TGQLERAFDFVGK---SRSFTNEVTYNSLLSSLGRKGDIQGLMELFGQMKAKGLVSNELT 274
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMA 247
+L + L G++ + + +LEM++ K V+ + + A + EA L M
Sbjct: 275 YAILIERLGWAGRVEDVWQLYLEMVDNDIKYDIVTINNVLDCLSKAGRVEAAFELFQDMK 334
Query: 248 LFG 250
G
Sbjct: 335 FKG 337
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 99/199 (49%), Gaps = 15/199 (7%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+K DIV+ N ++D K +VE A+++ + M+ + ++ D ++Y +I GLG G+ D A
Sbjct: 303 IKYDIVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAGKLDAAG 362
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+L EM+E GC P+ YN I +Y L A+ L EM E+G++PN +Y+ F
Sbjct: 363 ALLLEMEENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVVSYSSLIEGF 422
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ ++ +L+ M GC PN + L+ R + A++ +M + G
Sbjct: 423 GKAGRTDAAISLFREMKAEGCPPNHVTYNLLIDCLIRAGRFGAAMEYLREMRDAG----- 477
Query: 186 LVSDVLFDLLCDMGKLVEA 204
C MGK+ ++
Sbjct: 478 ----------CQMGKVTKS 486
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 120/313 (38%), Gaps = 67/313 (21%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++ V PD+ +Y LI +++ K+ E M + P++ +Y S++ G G+
Sbjct: 126 MFKLNVSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGR 185
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLR----------------------- 97
D+A D+ ++M + G PDA YN I + +L
Sbjct: 186 VDEACDIFQQMVQKGLQPDAVTYNILIDAFGKTGQLERAFDFVGKSRSFTNEVTYNSLLS 245
Query: 98 ------DASGLMD---EMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLP 148
D GLM+ +M KGL N TY + W+ + W LY M+
Sbjct: 246 SLGRKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLYLEMVDNDIKY 305
Query: 149 NTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKL------- 201
+ + ++ + +VE A +L+ DM KG + + ++L + L GKL
Sbjct: 306 DIVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAGKLDAAGALL 365
Query: 202 ----------------------------VEAEKSFLEMIEKGHKPSQVSFRRIKALMELA 233
A + FLEM E+G P+ VS+ + A
Sbjct: 366 LEMEENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVVSYSSLIEGFGKA 425
Query: 234 NKQEALQNLSNKM 246
+ +A +L +M
Sbjct: 426 GRTDAAISLFREM 438
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 107/223 (47%), Gaps = 2/223 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G+ + ++Y LI+ +VE +++ +M D DI D+++ +++ L G+
Sbjct: 263 MKAKGLVSNELTYAILIERLGWAGRVEDVWQLYLEMVDNDIKYDIVTINNVLDCLSKAGR 322
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A ++ ++MK G D YN I A +L A L+ EM E G +PN TYN
Sbjct: 323 VEAAFELFQDMKFKGLNADTVTYNILINGLGRAGKLDAAGALLLEMEENGCAPNIITYNT 382
Query: 121 FFRVF-YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ WSN L ++ L+ M G PN S L++ + + + A+ L+ +M +
Sbjct: 383 LISSYGKWSN-LSAATRLFLEMKERGVAPNVVSYSSLIEGFGKAGRTDAAISLFREMKAE 441
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
G + ++L D L G+ A + EM + G + +V+
Sbjct: 442 GCPPNHVTYNLLIDCLIRAGRFGAAMEYLREMRDAGCQMGKVT 484
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 103/258 (39%), Gaps = 38/258 (14%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G++PD V+YN LID + K Q+E+A+ V K R + ++Y S++ LG G
Sbjct: 196 MVQKGLQPDAVTYNILIDAFGKTGQLERAFDFVGKSRS---FTNEVTYNSLLSSLGRKGD 252
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVE------------ 108
++ +MK G + Y I A R+ D L EMV+
Sbjct: 253 IQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLYLEMVDNDIKYDIVTINN 312
Query: 109 -----------------------KGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
KGL+ + TYN+ + L ++ L M G
Sbjct: 313 VLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAGKLDAAGALLLEMEENG 372
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
C PN + L+ + + A +L+ +M E+G ++ L + G+ A
Sbjct: 373 CAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVVSYSSLIEGFGKAGRTDAAI 432
Query: 206 KSFLEMIEKGHKPSQVSF 223
F EM +G P+ V++
Sbjct: 433 SLFREMKAEGCPPNHVTY 450
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 105/249 (42%), Gaps = 7/249 (2%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
K D +N LI +Y + +EKA + + E P +Y+S+I G
Sbjct: 26 TKLDTQLFNTLIHIYGEANMMEKALQTLAAFTKEGGRPTAYTYSSMIQVFMKGGDVQNGL 85
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+ K+M + PD +N I + A ++ +A + +M + +SP+ TY + R
Sbjct: 86 LMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEACNVFGDMFKLNVSPDVYTYTILIRSL 145
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ + L+ M GC PN + ++ +V+ A ++ MV+KG
Sbjct: 146 GTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRVDEACDIFQQMVQKGLQPDA 205
Query: 186 LVSDVLFDLLCDMGKL------VEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEA 238
+ ++L D G+L V +SF + S + + I+ LMEL + +A
Sbjct: 206 VTYNILIDAFGKTGQLERAFDFVGKSRSFTNEVTYNSLLSSLGRKGDIQGLMELFGQMKA 265
Query: 239 LQNLSNKMA 247
+SN++
Sbjct: 266 KGLVSNELT 274
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/200 (18%), Positives = 88/200 (44%)
Query: 24 RQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAY 83
R+ + ++VE M+ + D + ++I G +KA L + G P A Y
Sbjct: 9 RRYDDVQRLVESMQKDRTKLDTQLFNTLIHIYGEANMMEKALQTLAAFTKEGGRPTAYTY 68
Query: 84 NAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMG 143
++ I+ + +++ + +M++ P+ TT+N+ ++ + + N++ M
Sbjct: 69 SSMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEACNVFGDMFK 128
Query: 144 TGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVE 203
P+ + L++ +++ ++L+ M +G + + G++ E
Sbjct: 129 LNVSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRVDE 188
Query: 204 AEKSFLEMIEKGHKPSQVSF 223
A F +M++KG +P V++
Sbjct: 189 ACDIFQQMVQKGLQPDAVTY 208
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/172 (20%), Positives = 76/172 (44%)
Query: 55 LGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPN 114
LG + D + +++ M++ D +N I Y A + A + ++G P
Sbjct: 5 LGAARRYDDVQRLVESMQKDRTKLDTQLFNTLIHIYGEANMMEKALQTLAAFTKEGGRPT 64
Query: 115 ATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWN 174
A TY+ +VF D+++ +Y +M+ +P+ + L+ + ++VE A ++
Sbjct: 65 AYTYSSMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEACNVFG 124
Query: 175 DMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
DM + + +L L +G++ K F M +G +P+ ++ +
Sbjct: 125 DMFKLNVSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSV 176
>gi|357167759|ref|XP_003581319.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Brachypodium distachyon]
Length = 554
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 120/239 (50%), Gaps = 7/239 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR GV PD+V+YN L++ C+ R ++ A IVE+M++ + PD ++YT++I G G+
Sbjct: 316 MRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGK 375
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A D+ ++M E D Y A I A R DA ++ EM+E L P+ TTY +
Sbjct: 376 LDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTM 435
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
F D+++ + L M G P + ++ LCK + ++ A L + M+
Sbjct: 436 VIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQ-MKNADMLLHAMLNI 494
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEA 238
G + ++L D C GK+ +E+ LE KG P + + + ELA K+ A
Sbjct: 495 GVSPDDITYNILLDGQCKHGKVANSEE--LES-SKGMVPDFAVYTSL--ISELAKKKPA 548
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 115/261 (44%), Gaps = 41/261 (15%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++GVKPD+ +Y LI +C+ ++E A K+ +MRD ++P+ + +T++I G
Sbjct: 246 MSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGN 305
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ D+ ++M+ G PD AYNA + C A+ L+ A +++EM GL P+ TY
Sbjct: 306 VNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYTT 365
Query: 121 FF---------------------------RVFYWSNDLRSSWNLYCR----------MMG 143
V Y + L S + R MM
Sbjct: 366 LIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTA--LISGLSKAGRPVDAERVLREMME 423
Query: 144 TGCLP-NTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLV 202
P NT M + C R+ V+ +L +M KG ++ +V+ + LC +G++
Sbjct: 424 AALEPDNTTYTMVIDAFC-RKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMK 482
Query: 203 EAEKSFLEMIEKGHKPSQVSF 223
A+ M+ G P +++
Sbjct: 483 NADMLLHAMLNIGVSPDDITY 503
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 104/221 (47%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
V+P +V++N LI C+ R ++ + ++M D + PDV +Y ++I G G+ + A
Sbjct: 216 VQPTVVTFNTLISGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAV 275
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+ EM++ G P+A + I +C + L +M +G+ P+ YN
Sbjct: 276 KMFNEMRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGL 335
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ +L+++ ++ M G P+ + L+ C + K+++A+ + M EK
Sbjct: 336 CRARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDE 395
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ L L G+ V+AE+ EM+E +P ++ +
Sbjct: 396 VTYTALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMV 436
>gi|15228903|ref|NP_188314.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274022|sp|Q9LSQ2.1|PP239_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g16890, mitochondrial; AltName: Full=Protein
PENTATRICOPEPTIDE REPEAT 40; Flags: Precursor
gi|7670019|dbj|BAA94973.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|332642359|gb|AEE75880.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 111/232 (47%), Gaps = 3/232 (1%)
Query: 1 MREMGVK---PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGL 57
+++MGV + SYN +ID CK R++E A + +M+D ISP+++++ + + G +
Sbjct: 413 LKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSV 472
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
G K VL+++ +G PD ++ I C AK ++DA EM+E G+ PN T
Sbjct: 473 RGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEIT 532
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
YN+ R + D S L+ +M G P+ + ++ + KV+ A +L M+
Sbjct: 533 YNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTML 592
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKAL 229
G L L + G+ EA + F + G P + R ++ L
Sbjct: 593 RIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPDSYTKRLVEEL 644
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 111/241 (46%), Gaps = 1/241 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GVKP Y L+ ++ + + +++M + + V SY ++I L + + A
Sbjct: 385 GVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENA 444
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
L EM++ G P+ +N + Y + ++ G++++++ G P+ T++L
Sbjct: 445 AMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINC 504
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ +++ +++ + M+ G PN + L++ C + +++L+ M E G
Sbjct: 505 LCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPD 564
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLS 243
+ + C M K+ +AE+ M+ G KP ++ IKAL E + EA + S
Sbjct: 565 LYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFS 624
Query: 244 N 244
+
Sbjct: 625 S 625
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 104/258 (40%), Gaps = 35/258 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G KPD +YN LI CK V++A ++V++M E P+V +YT +I G + G+
Sbjct: 206 MRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGR 265
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRN------------------------------- 89
D+A L+ M+ P+ A +
Sbjct: 266 VDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDA 325
Query: 90 --YCIAKR--LRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
YC++ ++ + ++ E+G P+++T+N +DL + ++ + G
Sbjct: 326 VLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRG 385
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
P + LV+ ++ + M G S + + + D LC ++ A
Sbjct: 386 VKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAA 445
Query: 206 KSFLEMIEKGHKPSQVSF 223
EM ++G P+ V+F
Sbjct: 446 MFLTEMQDRGISPNLVTF 463
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 61/118 (51%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
+G+KP YN +ID K ++ AY ++MR + PD +Y +I G+ G D+
Sbjct: 174 LGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDE 233
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
A ++K+M++ G P+ Y I + IA R+ +A ++ M + L+PN T F
Sbjct: 234 AIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTF 291
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 37/85 (43%)
Query: 41 ISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDAS 100
+ P Y ++I L D A ++M+ GC PD YN I C + +A
Sbjct: 176 MKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAI 235
Query: 101 GLMDEMVEKGLSPNATTYNLFFRVF 125
L+ +M ++G PN TY + F
Sbjct: 236 RLVKQMEQEGNRPNVFTYTILIDGF 260
Score = 37.0 bits (84), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 50/115 (43%)
Query: 110 GLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIA 169
G+ P+ YN SN L ++ + +M GC P+ + L+ ++ V+ A
Sbjct: 175 GMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEA 234
Query: 170 LQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
++L M ++G + +L D G++ EA K M + P++ + R
Sbjct: 235 IRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIR 289
>gi|255661004|gb|ACU25671.1| pentatricopeptide repeat-containing protein [Phyla dulcis]
Length = 369
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 111/222 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G D +Y L++ +CK+R + K+ +++E + D +Y+++I L +
Sbjct: 85 MAKSGFVEDSKTYGTLVNGFCKNRYINKSLQVLEIAEQKGGVLDAFAYSAMINALCKEAK 144
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA VL M + GC P+ YNA I+ A +L DA + EM P+ TYN+
Sbjct: 145 LEKAVCVLNGMIKSGCKPNTCVYNALIKGLVGASKLDDAIRVFHEMGTTHSPPDIVTYNI 204
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + +++L M+ G P+ + L+K +KVE+ALQLWN + +KG
Sbjct: 205 LINGLFKGDRFGEAYDLVKEMLEKGLDPSVITYSLLMKGLCLGDKVEMALQLWNQVTKKG 264
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
F + + ++L LC +GK A +L+M P+ V+
Sbjct: 265 FKPDVQMHNILIHGLCSVGKTQLALSLYLDMNRWNCAPNLVT 306
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 92/204 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G KP+ YN LI +++ A ++ +M PD+++Y +I GL +
Sbjct: 155 MIKSGCKPNTCVYNALIKGLVGASKLDDAIRVFHEMGTTHSPPDIVTYNILINGLFKGDR 214
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A D++KEM E G P Y+ ++ C+ ++ A L +++ +KG P+ +N+
Sbjct: 215 FGEAYDLVKEMLEKGLDPSVITYSLLMKGLCLGDKVEMALQLWNQVTKKGFKPDVQMHNI 274
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + +LY M C PN + L++ + + AL +W ++
Sbjct: 275 LIHGLCSVGKTQLALSLYLDMNRWNCAPNLVTQNTLMQGFYKDGNIRNALVIWARILRNE 334
Query: 181 FGSYILVSDVLFDLLCDMGKLVEA 204
I+ ++ LC ++ +A
Sbjct: 335 LQPDIISYNITLKGLCSCNRISDA 358
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 88/181 (48%), Gaps = 3/181 (1%)
Query: 2 REMGVK---PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLV 58
EMG PDIV+YN LI+ K + +AY +V++M ++ + P VI+Y+ ++ GL L
Sbjct: 188 HEMGTTHSPPDIVTYNILINGLFKGDRFGEAYDLVKEMLEKGLDPSVITYSLLMKGLCLG 247
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
+ + A + ++ + G PD +N I C + + A L +M +PN T
Sbjct: 248 DKVEMALQLWNQVTKKGFKPDVQMHNILIHGLCSVGKTQLALSLYLDMNRWNCAPNLVTQ 307
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
N + FY ++R++ ++ R++ P+ S +K ++ A+ +D V
Sbjct: 308 NTLMQGFYKDGNIRNALVIWARILRNELQPDIISYNITLKGLCSCNRISDAILFLHDAVS 367
Query: 179 K 179
K
Sbjct: 368 K 368
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 113/245 (46%), Gaps = 1/245 (0%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E V PD V YN +++ + + ++E +++ E M E V S+ ++I L G+ +
Sbjct: 18 ERKVSPDAVVYNAMLNGFYRAGRIEDCFELWEMMGREG-RRSVASFNTMIRVLFDNGKVE 76
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
+A + + M + G D+ Y + +C + + + +++ +KG +A Y+
Sbjct: 77 EAMSIRELMAKSGFVEDSKTYGTLVNGFCKNRYINKSLQVLEIAEQKGGVLDAFAYSAMI 136
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
L + + M+ +GC PNT L+K K++ A++++++M
Sbjct: 137 NALCKEAKLEKAVCVLNGMIKSGCKPNTCVYNALIKGLVGASKLDDAIRVFHEMGTTHSP 196
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNL 242
I+ ++L + L + EA EM+EKG PS +++ + + L +K E L
Sbjct: 197 PDIVTYNILINGLFKGDRFGEAYDLVKEMLEKGLDPSVITYSLLMKGLCLGDKVEMALQL 256
Query: 243 SNKMA 247
N++
Sbjct: 257 WNQVT 261
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 87/214 (40%), Gaps = 2/214 (0%)
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
G D A V +++ E PDA YNA + + A R+ D L + M +G + ++
Sbjct: 4 GNIDGAERVYEDIVERKVSPDAVVYNAMLNGFYRAGRIEDCFELWEMMGREG-RRSVASF 62
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
N RV + + + + ++ M +G + ++++ LV + + +LQ+ +
Sbjct: 63 NTMIRVLFDNGKVEEAMSIRELMAKSGFVEDSKTYGTLVNGFCKNRYINKSLQVLEIAEQ 122
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQE 237
KG + + LC KL +A MI+ G KP+ + IK L+ + +
Sbjct: 123 KGGVLDAFAYSAMINALCKEAKLEKAVCVLNGMIKSGCKPNTCVYNALIKGLVGASKLDD 182
Query: 238 ALQNLSNKMALFGPSMIPKREEYLAEMSASDSFS 271
A++ P I + + D F
Sbjct: 183 AIRVFHEMGTTHSPPDIVTYNILINGLFKGDRFG 216
>gi|15235288|ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098720|sp|O49436.1|PP327_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
gi|2827663|emb|CAA16617.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|7268804|emb|CAB79009.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|58013024|gb|AAW62965.1| embryo-defective 1025 [Arabidopsis thaliana]
gi|332658871|gb|AEE84271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 115/247 (46%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
M + P+ +S+N +I CK R V++A ++ M + PD +Y +++ GL + D+
Sbjct: 181 MNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDE 240
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
A +L EM+ GC P YN I C L + L+D M KG PN TYN
Sbjct: 241 AVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIH 300
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
L + +L RM+ + C+PN + L+ +Q + A++L + M E+G+
Sbjct: 301 GLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHL 360
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLS 243
+ VL L GK EA + +M EKG KP+ V + + + K + +
Sbjct: 361 NQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEIL 420
Query: 244 NKMALFG 250
N+M G
Sbjct: 421 NRMIASG 427
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 117/276 (42%), Gaps = 36/276 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G P V YN LID CK + + K+V+ M + P+ ++Y ++I GL L G+
Sbjct: 248 MQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGK 307
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDA--------------------- 99
DKA +L+ M C P+ Y I +R DA
Sbjct: 308 LDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSV 367
Query: 100 --SGLMDE------------MVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
SGL E M EKG PN Y++ + + RM+ +G
Sbjct: 368 LISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASG 427
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
CLPN + L+K + E A+Q+W +M + G VL D LC +G++ EA
Sbjct: 428 CLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAM 487
Query: 206 KSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQ 240
+ +M+ G KP V++ IK L + + AL+
Sbjct: 488 MVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALK 523
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 106/241 (43%), Gaps = 1/241 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E PD +Y L+D CK+ ++++A ++++M+ E SP + Y +I GL G
Sbjct: 213 MPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGD 272
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ ++ M GC P+ YN I C+ +L A L++ MV PN TY
Sbjct: 273 LTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGT 332
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L M G N L+ ++ K E A+ LW M EKG
Sbjct: 333 LINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKG 392
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI-KALMELANKQEAL 239
I+V VL D LC GK EA++ MI G P+ ++ + K + +EA+
Sbjct: 393 CKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAV 452
Query: 240 Q 240
Q
Sbjct: 453 Q 453
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 101/213 (47%), Gaps = 3/213 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G KP+IV Y+ L+D C++ + +A +I+ +M P+ +Y+S++ G G
Sbjct: 388 MAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGL 447
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A V KEM + GC + Y+ I C R+++A + +M+ G+ P+ Y+
Sbjct: 448 CEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSS 507
Query: 121 FFRVFYWSNDLRSSWNLYCRMM---GTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
+ + ++ LY M+ P+ + L+ Q+ + A+ L N M+
Sbjct: 508 IIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSML 567
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLE 210
++G ++ + + L + + +SFLE
Sbjct: 568 DRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLE 600
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 101/219 (46%), Gaps = 3/219 (1%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P+ V+Y LI+ K R+ A +++ M + + Y+ +I GL G+ ++A +
Sbjct: 325 PNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSL 384
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
++M E GC P+ Y+ + C + +A +++ M+ G PNA TY+ + F+
Sbjct: 385 WRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFK 444
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ + ++ M TGC N L+ +V+ A+ +W+ M+ G +
Sbjct: 445 TGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVA 504
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMI---EKGHKPSQVSF 223
+ LC +G + A K + EM+ E +P V++
Sbjct: 505 YSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTY 543
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 109/225 (48%), Gaps = 3/225 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G + Y+ LI K+ + E+A + KM ++ P+++ Y+ ++ GL G+
Sbjct: 353 MEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGK 412
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
P++A+++L M GC P+A Y++ ++ + +A + EM + G S N Y++
Sbjct: 413 PNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSV 472
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV--- 177
++ + ++ +M+ G P+T + ++K ++ AL+L+++M+
Sbjct: 473 LIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQE 532
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
E ++ ++L D LC + A M+++G P ++
Sbjct: 533 EPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVIT 577
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 54/118 (45%), Gaps = 16/118 (13%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP-DKAR 65
+PD+V+YN L+D C + + +A ++ M D PDVI+ + + L DK R
Sbjct: 537 QPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGR 596
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
L+E+ + +R+ A +++ M+ K L+P +T+ + R
Sbjct: 597 SFLEEL---------------VVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVR 639
>gi|414887654|tpg|DAA63668.1| TPA: hypothetical protein ZEAMMB73_339081 [Zea mays]
Length = 1098
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 116/223 (52%), Gaps = 1/223 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +MGV+ ++V+Y+ +++ YC+ Q A ++++ + SP++++YT ++ G
Sbjct: 269 MTKMGVEVNLVAYHAVMNGYCEVGQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKN 328
Query: 61 PDKARDVLKEM-KEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
++A V++E+ K D A + A I YC R+ DA+ L++EMV+ L N YN
Sbjct: 329 MEEAEGVVQEIRKNKQLVVDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYN 388
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ + + + N+ M G G P+T S LV ++ + A + +N M+
Sbjct: 389 IMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRN 448
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
GF + L + L C +G + +A + + M++KG P+++S
Sbjct: 449 GFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEIS 491
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 91/173 (52%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ + ++N +I+ CK ++ +A ++V+KM+ PD+I+Y ++ G +G D+A
Sbjct: 519 GLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRA 578
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+L E++ G P +N+ I + IAK+ + ++ EM +GLSPN Y
Sbjct: 579 SRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAG 638
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
+ DL +++NLY M+ G +PN C LV R+ K + A + ++V
Sbjct: 639 WCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLV 691
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 102/218 (46%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
D + +I+ YC+ ++E A +++ +M D + ++ Y +I G +G+ +A ++L
Sbjct: 348 DEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNIL 407
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
EM G PD +YN+ + YC + A + M+ G + TYN + F
Sbjct: 408 HEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSL 467
Query: 129 NDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVS 188
+ + L+ M+ G PN SC L+ + K E AL LW + + +G
Sbjct: 468 GSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTF 527
Query: 189 DVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + + LC + ++ EAE+ +M + P +++R +
Sbjct: 528 NTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTL 565
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 103/217 (47%), Gaps = 13/217 (5%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ PDI++Y L YCK +++A +I+ ++ + +P + + S+I G + Q
Sbjct: 550 MKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQ 609
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
K D+L EM G P+ AY A I +C L A L EM+EKGL PN +
Sbjct: 610 HGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSS 669
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
FY + + ++GT +P+ + R E ++A + D V G
Sbjct: 670 LVSCFYRKGKFDEANLVLQNLVGTDMIPDISA--------PRLEIGKVANFI--DTVAGG 719
Query: 181 --FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
+ I+ + V+F LC +G++ +A+ ++ +KG
Sbjct: 720 NHHSAKIMWNIVIFG-LCKLGRIEDAKNLLADLKDKG 755
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 114/244 (46%), Gaps = 3/244 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMR-DEDISPDVISYTSIIGGLGLVGQPDK 63
G P+IV+Y L+ YC ++ +E+A +V+++R ++ + D + ++I G +G+ +
Sbjct: 308 GFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGAVINGYCQMGRMED 367
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
A +L EM + + YN I YC R+ +A ++ EM G+ P+ +YN
Sbjct: 368 AARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVD 427
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
+ + ++ Y M+ G T + L+K ++ AL+LW M++KG
Sbjct: 428 GYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAP 487
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNL 242
+ L D GK +A + E + +G + +F I L ++ EA + L
Sbjct: 488 NEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEA-EEL 546
Query: 243 SNKM 246
+KM
Sbjct: 547 VDKM 550
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 96/211 (45%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
++ YN +I+ YCK ++ +A+ I+ +M + PD SY S++ G G +KA +
Sbjct: 383 NLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETY 442
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
M G YNA ++ +C + DA L M++KG++PN + + F+ S
Sbjct: 443 NTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKS 502
Query: 129 NDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVS 188
+ NL+ + G NT + ++ + E++ A +L + M + I+
Sbjct: 503 GKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITY 562
Query: 189 DVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
LF C +G + A + E+ G P+
Sbjct: 563 RTLFSGYCKIGDMDRASRILNELENLGFAPT 593
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 113/251 (45%), Gaps = 30/251 (11%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDV--------------- 45
M E G+ P++ + L+ + + + ++A +++ + D+ PD+
Sbjct: 655 MIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVANFID 714
Query: 46 -----------ISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAK 94
I + +I GL +G+ + A+++L ++K+ G D Y++ I C A
Sbjct: 715 TVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHG-CSAS 773
Query: 95 RLRD-ASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSC 153
D A L D M+ GL+PN TYN S +L + +L+ ++ G PN +
Sbjct: 774 GFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITY 833
Query: 154 MFLV-KLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMI 212
L+ K CK E A +L M+E+G + +L + LC G + EA K +MI
Sbjct: 834 NTLIDKHCKDGYITE-AFKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMI 892
Query: 213 EKGHKPSQVSF 223
E P+ V++
Sbjct: 893 ENNVDPNYVTY 903
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 110/264 (41%), Gaps = 20/264 (7%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G ++YN L+ +C ++ A ++ M + I+P+ IS ++++ G G+
Sbjct: 445 MLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGK 504
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA ++ KE G + +N I C +R+ +A L+D+M + P+ TY
Sbjct: 505 TEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRT 564
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK---LCKRQEKVEIALQLWNDMV 177
F + D+ + + + G P + L+ + K+ KV + +M
Sbjct: 565 LFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVN---DILFEMS 621
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP------SQVSFRRIKALME 231
+G + L C G L A +LEMIEKG P S VS K +
Sbjct: 622 NRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFD 681
Query: 232 LANKQEALQNLSNKMALFGPSMIP 255
AN LQN L G MIP
Sbjct: 682 EANL--VLQN------LVGTDMIP 697
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 80/170 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+++ G D +Y+ LI V+ A+ + + M ++P++++Y S+I GL G+
Sbjct: 751 LKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGE 810
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + K++ G P+A YN I +C + +A L M+E+G+ P TY++
Sbjct: 811 LSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSI 870
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIAL 170
+ + L +M+ PN + L++ R E V++ +
Sbjct: 871 LINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLIQGYVRCESVDVPI 920
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 98/252 (38%), Gaps = 38/252 (15%)
Query: 12 SYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEM 71
S++ L+ Q++ A ++ ++MR + S SI+ L G V ++M
Sbjct: 175 SFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVFEQM 234
Query: 72 KEYGCYPDA-----------------------------------AAYNAAIRNYCIAKRL 96
+ G PD AY+A + YC +
Sbjct: 235 QRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEVGQT 294
Query: 97 RDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFL 156
DA ++D + +G SPN TY L + + ++ + + + L ++
Sbjct: 295 NDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGA 354
Query: 157 V--KLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEK 214
V C+ ++E A +L N+MV+ + V +++ + C +G++VEA EM
Sbjct: 355 VINGYCQ-MGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGV 413
Query: 215 GHKPSQVSFRRI 226
G +P S+ +
Sbjct: 414 GVRPDTYSYNSL 425
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 95/252 (37%), Gaps = 61/252 (24%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ P+ V+Y LI +CK+ + AY + +M ++ + P++ +S++ G+
Sbjct: 620 MSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGK 679
Query: 61 PDKARDVLKEMKEYGCYPDAAA--------------------------YNAAIRNYCIAK 94
D+A VL+ + PD +A +N I C
Sbjct: 680 FDEANLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLG 739
Query: 95 RLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCM 154
R+ DA L+ ++ +KG + TY+
Sbjct: 740 RIEDAKNLLADLKDKGFVADNFTYS----------------------------------- 764
Query: 155 FLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEK 214
L+ C V++A L + M+ G I+ + L LC G+L A F ++ K
Sbjct: 765 SLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTK 824
Query: 215 GHKPSQVSFRRI 226
G P+ +++ +
Sbjct: 825 GISPNAITYNTL 836
>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
Length = 561
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 129/247 (52%), Gaps = 8/247 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G PD+++YN +I C+D +++ A ++++M PDVI+Y++II GL +
Sbjct: 267 MSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWR 326
Query: 61 PDK------ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPN 114
D A ++L+ MK+ GC P+A Y I C A++ + A L+ M++ + P+
Sbjct: 327 VDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPD 386
Query: 115 ATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWN 174
+++++ S+DL +++ ++ M C PN + L+ + +V+ A++++
Sbjct: 387 LSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFE 446
Query: 175 DMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELA 233
MVE F + + + D LC +G++ EA + MI K P S+ I+ L ++
Sbjct: 447 LMVES-FRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVS 505
Query: 234 NKQEALQ 240
+EA +
Sbjct: 506 CVEEAYE 512
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 117/242 (48%), Gaps = 7/242 (2%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P++V+Y +I+ CKD ++++A ++++ M + P+VI+Y+ ++ GL G+ DK +
Sbjct: 134 PNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTL 193
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L+EM G PD YN + C ++RL +A L+ M+ G P TYN +F
Sbjct: 194 LQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCR 253
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
S + ++ L M GC P+ + ++ R +++ A L MV ++
Sbjct: 254 SKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVIT 313
Query: 188 SDVLFDLLC-----DMGKLVEAEKSFLEMIEK-GHKPSQVSFR-RIKALMELANKQEALQ 240
+ D LC D +EA LEM+++ G P+ ++ I+ L Q+AL
Sbjct: 314 YSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALA 373
Query: 241 NL 242
L
Sbjct: 374 LL 375
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 102/214 (47%), Gaps = 4/214 (1%)
Query: 14 NCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKE 73
NC +++ + Q +A V+ R+E P+ +Y S+I GL G+ D+A ++L EM++
Sbjct: 2 NCALNLLVRAGQHGQA---VQLFREERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRD 58
Query: 74 YGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRS 133
G P A +N IR C A R DA G + +P+ T+N+ S +
Sbjct: 59 RGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEE 118
Query: 134 SWNLYCRMMGTG-CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLF 192
++ ++ M + CLPN + ++ + K++ A++L + M E G ++ VL
Sbjct: 119 AFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLV 178
Query: 193 DLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ LC G+ + EM +G +P + + +
Sbjct: 179 EGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTL 212
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 108/232 (46%), Gaps = 6/232 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G P++++Y+ L++ CK + +K + ++++M PDVI Y +++ GL +
Sbjct: 162 MNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRR 221
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A ++++ M GCYP YN+ + +C +K++ A L+ M E+G P+ YN
Sbjct: 222 LDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNT 281
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQE-----KVEIALQLWN 174
L + L +M+ C+P+ + ++ LCK K+E A ++
Sbjct: 282 VIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILE 341
Query: 175 DMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
M + G V+ + LC K +A MI+ P SF +
Sbjct: 342 MMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMV 393
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 103/232 (44%), Gaps = 4/232 (1%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
RE P+ +Y LI CK ++++AY+++++MRD I P V + +I GL G+
Sbjct: 22 REERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRF 81
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEM-VEKGLSPNATTYNL 120
A K + C PD +N + + R+ +A + + M PN TY
Sbjct: 82 GDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTT 141
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
L + L M TGC PN + LV+ + + + L +M +G
Sbjct: 142 VINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRG 201
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMEL 232
F +++ + L + LC +L EA + MI G P+ V++ +LMEL
Sbjct: 202 FQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTY---NSLMEL 250
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 1/217 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G P+ +Y +I+ C+ R+ ++A ++ +M D ++ PD+ S++ +IG L
Sbjct: 343 MKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHD 402
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A + M E C P+ AY A I + A + + MVE P TYN
Sbjct: 403 LDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVES-FRPGVATYNS 461
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + M+ C P+ S L++ R VE A +L+ + KG
Sbjct: 462 VLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKG 521
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHK 217
F + V +VL + LC +L +A ++IE G+K
Sbjct: 522 FAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAGYK 558
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 99/230 (43%), Gaps = 3/230 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G+ P + +N +I CK + A + + +PD+I++ ++ L G+
Sbjct: 56 MRDRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGR 115
Query: 61 PDKARDVLKEMKEYG-CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
++A + + M C P+ Y I C +L A L+D M E G PN TY+
Sbjct: 116 VEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYS 175
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNT-QSCMFLVKLCKRQEKVEIALQLWNDMVE 178
+ + + L M G P+ L LCK + +++ AL+L M+
Sbjct: 176 VLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSR-RLDEALELVQLMIR 234
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKA 228
G ++ + L +L C ++ A + M E+G P +++ + A
Sbjct: 235 SGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIA 284
>gi|15234349|ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g28010
gi|4455360|emb|CAB36770.1| putative protein [Arabidopsis thaliana]
gi|7269655|emb|CAB79603.1| putative protein [Arabidopsis thaliana]
gi|332660020|gb|AEE85420.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 704
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 111/223 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR + PD+ SYN +I +C+ +++EKA ++ +M+ S ++++ +I G+
Sbjct: 168 MRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGK 227
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A LKEMK G D Y + IR +C L L DE++E+G SP A TYN
Sbjct: 228 MDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNT 287
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
R F L+ + ++ M+ G PN + L+ K + ALQL N M+EK
Sbjct: 288 LIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKD 347
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ +++ + LC G + +A + M ++ +P +++
Sbjct: 348 EEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITY 390
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 106/260 (40%), Gaps = 37/260 (14%)
Query: 1 MREMGVKPDI-----------------------------------VSYNCLIDVYCKDRQ 25
M E GV+P++ V+YN +I+ CKD
Sbjct: 308 MIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGL 367
Query: 26 VEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCY--PDAAAY 83
V A +IVE M+ PD I+Y ++GGL G D+A +L M + Y PD +Y
Sbjct: 368 VADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISY 427
Query: 84 NAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMG 143
NA I C RL A + D +VEK + + T N+ + D+ + L+ ++
Sbjct: 428 NALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISD 487
Query: 144 TGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVE 203
+ + N+ + ++ + + +A L M + + L LC G L +
Sbjct: 488 SKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQ 547
Query: 204 AEKSFLEMIEKGHKPSQVSF 223
A + F EM + P VSF
Sbjct: 548 AWRLFEEMQRDNNFPDVVSF 567
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 94/192 (48%), Gaps = 3/192 (1%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E G P ++YN LI +CK Q+++A +I E M + + P+V +YT +I GL VG+
Sbjct: 275 ERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTK 334
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
+A +L M E P+A YN I C + DA +++ M ++ P+ TYN+
Sbjct: 335 EALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILL 394
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCL--PNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK- 179
DL + L M+ P+ S L+ ++ ++ AL +++ +VEK
Sbjct: 395 GGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKL 454
Query: 180 GFGSYILVSDVL 191
G G + + +L
Sbjct: 455 GAGDRVTTNILL 466
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 118/261 (45%), Gaps = 11/261 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E + VS + L++ Y + R+ A+ ++ M + +V ++ ++ GL +
Sbjct: 98 MLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLE 157
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA +L+EM+ PD +YN IR +C K L A L +EM G S + T+ +
Sbjct: 158 CGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGI 217
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
F + + + M G + L++ C E ++ L+++++E+
Sbjct: 218 LIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGE-LDRGKALFDEVLER 276
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEA 238
G + + L C +G+L EA + F MIE+G +P+ ++ I L + +EA
Sbjct: 277 GDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEA 336
Query: 239 LQNLSNKMALFGPSMIPKREE 259
LQ L+ MI K EE
Sbjct: 337 LQLLN--------LMIEKDEE 349
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 80/168 (47%)
Query: 12 SYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEM 71
+Y +ID +CK + A ++ KMR ++ P V Y ++ L G D+A + +EM
Sbjct: 496 TYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEM 555
Query: 72 KEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDL 131
+ +PD ++N I A ++ A L+ M GLSP+ TY+ F L
Sbjct: 556 QRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYL 615
Query: 132 RSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ + + +M+ +G P+ C ++K C Q + + +L +V+K
Sbjct: 616 DEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDK 663
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 60/115 (52%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR ++P + YNCL+ CK+ +++A+++ E+M+ ++ PDV+S+ +I G G
Sbjct: 520 MRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGD 579
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNA 115
A +L M G PD Y+ I + L +A D+MV+ G P+A
Sbjct: 580 IKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDA 634
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 90/211 (42%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD++SYN LI CK+ ++ +A I + + ++ + D ++ ++ G +KA ++
Sbjct: 422 PDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMEL 481
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
K++ + ++ Y A I +C L A GL+ +M L P+ YN
Sbjct: 482 WKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCK 541
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
L +W L+ M P+ S ++ + ++ A L M G +
Sbjct: 542 EGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFT 601
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
L + +G L EA F +M++ G +P
Sbjct: 602 YSKLINRFLKLGYLDEAISFFDKMVDSGFEP 632
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 96/226 (42%), Gaps = 1/226 (0%)
Query: 14 NCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKE 73
N L+ + R E A+ KM + D + +S + ++ + + A VL M +
Sbjct: 76 NNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLK 135
Query: 74 YGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRS 133
G + +N ++ C A L+ EM L P+ +YN R F +L
Sbjct: 136 RGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEK 195
Query: 134 SWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFD 193
+ L M G+GC + + L+ + K++ A+ +M G + ++V L
Sbjct: 196 ALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIR 255
Query: 194 LLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEA 238
CD G+L + F E++E+G P +++ I+ +L +EA
Sbjct: 256 GFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEA 301
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 58/105 (55%), Gaps = 2/105 (1%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD+VS+N +ID K ++ A ++ M +SPD+ +Y+ +I +G D+A
Sbjct: 562 PDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISF 621
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDA-SGLMDEMVEKGL 111
+M + G PDA ++ ++ YCI++ D + L+ ++V+K +
Sbjct: 622 FDKMVDSGFEPDAHICDSVLK-YCISQGETDKLTELVKKLVDKDI 665
>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g31850, chloroplastic; AltName: Full=Protein PROTON
GRADIENT REGULATION 3; Flags: Precursor
gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
Length = 1112
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 108/226 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +GVKP +Y ID Y K A + EKM+ + I+P++++ + + L G+
Sbjct: 424 MESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGR 483
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A+ + +K+ G PD+ YN ++ Y + +A L+ EM+E G P+ N
Sbjct: 484 DREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNS 543
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
Y ++ + +W ++ RM P + L+ + K++ A++L+ MV+KG
Sbjct: 544 LINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKG 603
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + LFD LC ++ A K +M++ G P ++ I
Sbjct: 604 CPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTI 649
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 116/261 (44%), Gaps = 35/261 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGL----- 55
M + G PD+V++ L+D CK +A+ ++ MRD+ I P++ +Y ++I GL
Sbjct: 354 MEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHR 413
Query: 56 ------------------------------GLVGQPDKARDVLKEMKEYGCYPDAAAYNA 85
G G A + ++MK G P+ A NA
Sbjct: 414 LDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNA 473
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
++ + A R R+A + + + GL P++ TYN+ + + ++ + L MM G
Sbjct: 474 SLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENG 533
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
C P+ L+ + ++V+ A +++ M E ++ + L L GK+ EA
Sbjct: 534 CEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAI 593
Query: 206 KSFLEMIEKGHKPSQVSFRRI 226
+ F M++KG P+ ++F +
Sbjct: 594 ELFEGMVQKGCPPNTITFNTL 614
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 111/246 (45%), Gaps = 1/246 (0%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
+++GV+P + +YN LI + +E A + +++ PDV +Y ++ G G+
Sbjct: 777 KDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKI 836
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLM-DEMVEKGLSPNATTYNL 120
D+ ++ KEM + C + +N I A + DA L D M ++ SP A TY
Sbjct: 837 DELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGP 896
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
S L + L+ M+ GC PN L+ + + + A L+ MV++G
Sbjct: 897 LIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEG 956
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ VL D LC +G++ E F E+ E G P V + I + +++ E
Sbjct: 957 VRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEAL 1016
Query: 241 NLSNKM 246
L N+M
Sbjct: 1017 VLFNEM 1022
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 103/222 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G+KP++ ++ I V + ++ +AY+I+++M DE PDV++YT +I L +
Sbjct: 249 METLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARK 308
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A++V ++MK PD Y + + + L EM + G P+ T+ +
Sbjct: 309 LDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTI 368
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + +++ M G LPN + L+ R +++ AL+L+ +M G
Sbjct: 369 LVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLG 428
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
V D G V A ++F +M KG P+ V+
Sbjct: 429 VKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVA 470
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 107/247 (43%), Gaps = 1/247 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G PD+V+Y LID C R+++ A ++ EKM+ PD ++Y +++
Sbjct: 284 MDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRD 343
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D + EM++ G PD + + C A +A +D M ++G+ PN TYN
Sbjct: 344 LDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNT 403
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L + L+ M G P + + + + AL+ + M KG
Sbjct: 404 LICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKG 463
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEAL 239
I+ + L G+ EA++ F + + G P V++ +K ++ EA+
Sbjct: 464 IAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAI 523
Query: 240 QNLSNKM 246
+ LS M
Sbjct: 524 KLLSEMM 530
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 116/252 (46%), Gaps = 2/252 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
++ G PD+ +YN L+D Y K ++++ +++ ++M + + I++ +I GL G
Sbjct: 811 VKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGN 870
Query: 61 PDKARDVLKE-MKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
D A D+ + M + P A Y I + RL +A L + M++ G PN YN
Sbjct: 871 VDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYN 930
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ F + + ++ L+ RM+ G P+ ++ LV +V+ L + ++ E
Sbjct: 931 ILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKES 990
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEM-IEKGHKPSQVSFRRIKALMELANKQEA 238
G ++ +++ + L +L EA F EM +G P ++ + + +A E
Sbjct: 991 GLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEE 1050
Query: 239 LQNLSNKMALFG 250
+ N++ G
Sbjct: 1051 AGKIYNEIQRAG 1062
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 112/249 (44%), Gaps = 1/249 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MRE G + SYN LI + K R +A ++ +M E P + +Y+S++ GLG
Sbjct: 179 MREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRD 238
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D +LKEM+ G P+ + IR A ++ +A ++ M ++G P+ TY +
Sbjct: 239 IDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTV 298
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L + ++ +M P+ + + L+ ++ Q W++M + G
Sbjct: 299 LIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDG 358
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
++ +L D LC G EA + M ++G P+ ++ I L+ + +AL
Sbjct: 359 HVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDAL 418
Query: 240 QNLSNKMAL 248
+ N +L
Sbjct: 419 ELFGNMESL 427
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 98/191 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
++++G+ PD V+YN ++ Y K ++++A K++ +M + PDVI S+I L +
Sbjct: 494 LKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADR 553
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + MKE P YN + ++++A L + MV+KG PN T+N
Sbjct: 554 VDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNT 613
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F ++++ + + +MM GC+P+ + ++ + +V+ A+ ++ M +
Sbjct: 614 LFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLV 673
Query: 181 FGSYILVSDVL 191
+ ++ + +L
Sbjct: 674 YPDFVTLCTLL 684
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 2/212 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G+ P+IV+ N + K + +A +I ++D + PD ++Y ++ VG+
Sbjct: 459 MKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGE 518
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A +L EM E GC PD N+ I A R+ +A + M E L P TYN
Sbjct: 519 IDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNT 578
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+ ++ + L+ M+ GC PNT + L LCK E V +AL++ M++
Sbjct: 579 LLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDE-VTLALKMLFKMMDM 637
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEM 211
G + + + L G++ EA F +M
Sbjct: 638 GCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM 669
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 101/220 (45%), Gaps = 2/220 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G +P + +Y+ L+ K R ++ ++++M + P+V ++T I LG G+ ++A
Sbjct: 218 GFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEA 277
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++LK M + GC PD Y I C A++L A + ++M P+ TY
Sbjct: 278 YEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDR 337
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEKGFGS 183
F + DL S + M G +P+ + LV LCK E A + M ++G
Sbjct: 338 FSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGE-AFDTLDVMRDQGILP 396
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + L L + +L +A + F M G KP+ ++
Sbjct: 397 NLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTY 436
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 95/227 (41%), Gaps = 1/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + P +Y LID K ++ +A ++ E M D P+ Y +I G G G+
Sbjct: 882 MSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGE 941
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A + K M + G PD Y+ + C+ R+ + E+ E GL+P+ YNL
Sbjct: 942 ADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNL 1001
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGT-GCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
S+ L + L+ M + G P+ + L+ VE A +++N++
Sbjct: 1002 IINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRA 1061
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G + + L GK A + M+ G P+ ++ ++
Sbjct: 1062 GLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 97/210 (46%)
Query: 14 NCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKE 73
N +++ D ++E+ + + M+ I D +Y +I L + G +A L++M+E
Sbjct: 122 NYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMRE 181
Query: 74 YGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRS 133
+G +A +YN I ++ +A + M+ +G P+ TY+ D+ S
Sbjct: 182 FGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDS 241
Query: 134 SWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFD 193
L M G PN + +++ R K+ A ++ M ++G G ++ VL D
Sbjct: 242 VMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLID 301
Query: 194 LLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
LC KL A++ F +M HKP +V++
Sbjct: 302 ALCTARKLDCAKEVFEKMKTGRHKPDRVTY 331
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 79/206 (38%), Gaps = 37/206 (17%)
Query: 16 LIDVYCKDRQVEKAYKIVEKM-RDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEY 74
+I CK V A + EK +D + P + +Y +IGGL + A+DV ++K
Sbjct: 755 IIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKST 814
Query: 75 GCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSS 134
GC PD TYN + S +
Sbjct: 815 GCIPDV-----------------------------------ATYNFLLDAYGKSGKIDEL 839
Query: 135 WNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWND-MVEKGFGSYILVSDVLFD 193
+ LY M C NT + ++ + V+ AL L+ D M ++ F L D
Sbjct: 840 FELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLID 899
Query: 194 LLCDMGKLVEAEKSFLEMIEKGHKPS 219
L G+L EA++ F M++ G +P+
Sbjct: 900 GLSKSGRLYEAKQLFEGMLDYGCRPN 925
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/222 (18%), Positives = 95/222 (42%), Gaps = 4/222 (1%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEK-MRDEDISPDVISYTSIIGGLGLVGQPDKA 64
V PD V+ L+ K +E AYKI+ + + P + + +IG + D A
Sbjct: 673 VYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNA 732
Query: 65 RDVLKEMKEYG-CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEK-GLSPNATTYNLFF 122
+ + G C + IR C + A L ++ + G+ P TYNL
Sbjct: 733 VSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLI 792
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
++ + + +++ ++ TGC+P+ + FL+ + K++ +L+ +M
Sbjct: 793 GGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECE 852
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMI-EKGHKPSQVSF 223
+ + +++ L G + +A + +++ ++ P+ ++
Sbjct: 853 ANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTY 894
>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
Length = 1048
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 105/218 (48%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ P+++ + LID + K+ + +A + ++M + P+V +Y S+I G + G A+
Sbjct: 775 IDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAK 834
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+ M GC+PD YN I +C +KR+ D L EM +GL +A TYN +
Sbjct: 835 YMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGY 894
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ L + ++ RM+ G P+ + L+ K+E AL + D+ + I
Sbjct: 895 CQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDI 954
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ +++ LC KL EA F + KG KP +++
Sbjct: 955 ITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAY 992
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 105/217 (48%), Gaps = 4/217 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G++ D V+YN LI + A +++ M I P+VI +T++I G
Sbjct: 735 MEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGN 794
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR++ KEM P+ YN+ I +CI L DA + D MV KG P+ TYN
Sbjct: 795 LLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNT 854
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F S + L+C M G + + + L+ + K+ +A +++N MV+ G
Sbjct: 855 LITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCG 914
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHK 217
I+ ++L D LC+ GK+ +A L M+E K
Sbjct: 915 VSPDIVTYNILLDCLCNNGKIEKA----LVMVEDLQK 947
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 105/223 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P++V YN +I+ CK+R + A ++ M + I D ++Y ++I GL G+
Sbjct: 700 MDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGR 759
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +L++M + P+ + A I + L +A L EM+ + + PN TYN
Sbjct: 760 WTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNS 819
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F L + ++ M+ GC P+ + L+ + ++VE ++L+ +M +G
Sbjct: 820 LINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQG 879
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ L C GKL A+K F M++ G P V++
Sbjct: 880 LVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTY 922
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 104/222 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G +P++V YN LID CK+ ++ A +++ +M + + DV++Y +++ GL G+
Sbjct: 167 MVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGR 226
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +L++M + PD + A I + L +A L EM++ + PN TYN
Sbjct: 227 WSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNS 286
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
L + + M GC PN + L+ + V+ ++L+ M +G
Sbjct: 287 IINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEG 346
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
F + I + L C +GKL A F M+ + P ++
Sbjct: 347 FNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIIT 388
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 106/226 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ D+ S+ LI +C+ ++ A ++ KM P ++++ S++ G LV +
Sbjct: 97 MELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNR 156
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A ++ M + G P+ YN I C L A L++EM +KGL + TYN
Sbjct: 157 IGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNT 216
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+S + + MM P+ + L+ + +Q ++ A +L+ +M++
Sbjct: 217 LLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSS 276
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + + + LC G+L +A+K+F M KG P+ V++ +
Sbjct: 277 VDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTL 322
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 99/227 (43%), Gaps = 19/227 (8%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P++V+YN LI +CK R V++ K+ ++M E + D+ +Y ++I G VG+
Sbjct: 307 MASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGK 366
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A D+ M PD + + C+ + A D+M E YN+
Sbjct: 367 LRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNI 426
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEK 179
++ + +W L+CR+ G P+ ++ + ++ LCK + E A +L M E+
Sbjct: 427 MIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRRE-ADELIRRMKEE 485
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G ++C M AE LE +K +S R I
Sbjct: 486 G-------------IICQM----NAEDDHLEEHSSSNKEISLSLREI 515
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 65/128 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV PDIV+YN L+D C + ++EKA +VE ++ ++ D+I+Y II GL +
Sbjct: 910 MVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDK 969
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + + + G PDA AY I C R+A L M E G P+ Y+
Sbjct: 970 LKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDE 1029
Query: 121 FFRVFYWS 128
R Y S
Sbjct: 1030 TLRDHYTS 1037
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 91/182 (50%), Gaps = 2/182 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD+V+YN LI +CK ++VE K+ +M + + D +Y ++I G G+
Sbjct: 840 MVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGK 899
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A+ V M + G PD YN + C ++ A +++++ + + + TYN+
Sbjct: 900 LNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNI 959
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+ ++ L+ +W L+ + G P+ + + ++ LC++ + E A +L M E
Sbjct: 960 IIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQRE-ADKLCRRMKED 1018
Query: 180 GF 181
GF
Sbjct: 1019 GF 1020
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 97/232 (41%), Gaps = 38/232 (16%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P IV + L+ R+ E +KM IS D+ S+T +I + A V
Sbjct: 69 PSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSV 128
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L +M + G P + + + +C+ R+ DA L+ MV+ G PN YN
Sbjct: 129 LGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYN-------- 180
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ LCK E + IAL+L N+M +KG G+ ++
Sbjct: 181 --------------------------TLIDGLCKNGE-LNIALELLNEMEKKGLGADVVT 213
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
+ L LC G+ +A + +M+++ P V+F AL+++ KQ L
Sbjct: 214 YNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTF---TALIDVFVKQGNL 262
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 96/226 (42%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G+ D+ S+ LI +C+ ++ A ++ KM P +++ S++ G +
Sbjct: 630 MENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNR 689
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++ M +G P+ YN I C + L +A + M +KG+ +A TYN
Sbjct: 690 FQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNT 749
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
S + L M+ PN L+ ++ + A L+ +M+ +
Sbjct: 750 LISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRS 809
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + L + C G L +A+ F M+ KG P V++ +
Sbjct: 810 VVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTL 855
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 89/216 (41%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P IV + ++ V K + + + KM + IS D+ S+T +I + A +
Sbjct: 602 PSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALAL 661
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L +M + G P + + +C R ++A L+D M G PN YN
Sbjct: 662 LGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCK 721
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ DL ++ ++ M G + + L+ + A +L DMV++ ++
Sbjct: 722 NRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIF 781
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
L D G L+EA + EMI + P+ ++
Sbjct: 782 FTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTY 817
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 102/224 (45%), Gaps = 4/224 (1%)
Query: 25 QVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYN 84
+ + A+ + +M P ++ +T ++ + + + D + +M+ G D ++
Sbjct: 584 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 643
Query: 85 AAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGT 144
I +C RL A L+ +M++ G P+ T F N + + +L M G
Sbjct: 644 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 703
Query: 145 GCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVE 203
G +PN ++ LCK ++ + AL+++ M +KG + + + L L + G+ +
Sbjct: 704 GFVPNVVIYNTVINGLCKNRD-LNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTD 762
Query: 204 AEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLSNKM 246
A + +M+++ P+ + F I ++ N EA +NL +M
Sbjct: 763 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEA-RNLYKEM 805
>gi|255560884|ref|XP_002521455.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539354|gb|EEF40945.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 623
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 109/218 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G+ P+ ++N L V+C+D V+K +E+M +E PD+++Y ++I G+
Sbjct: 240 MARVGIHPNSYTFNILTHVFCQDGDVDKVNDFLERMEEEGFEPDIVTYNTLISCYCRKGR 299
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A + + M PD +Y A + C ++R+A L M+ +GL+P+ ++N
Sbjct: 300 LDDAFYLYRIMYRRNVLPDLVSYTALMNGLCKEGKVREAHQLFHRMIHRGLNPDIVSFNT 359
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ +R S +L M+G+G P+ +C L++ +++ ++ AL L ++ G
Sbjct: 360 LICGYCKEGKMRESRSLLHEMIGSGICPDKVTCQVLIEGYRKEARIVSALNLVVELERFG 419
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
+ D L +C+ G+ A+ + ++G+ P
Sbjct: 420 VPISTDIYDYLMVSICEEGRPFAAKSLLQRISQRGYVP 457
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 124/256 (48%), Gaps = 4/256 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G +PDIV+YN LI YC+ +++ A+ + M ++ PD++SYT+++ GL G+
Sbjct: 275 MEEEGFEPDIVTYNTLISCYCRKGRLDDAFYLYRIMYRRNVLPDLVSYTALMNGLCKEGK 334
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + M G PD ++N I YC ++R++ L+ EM+ G+ P+ T +
Sbjct: 335 VREAHQLFHRMIHRGLNPDIVSFNTLICGYCKEGKMRESRSLLHEMIGSGICPDKVTCQV 394
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFL-VKLCKRQEKVEIALQLWNDMVEK 179
+ + S+ NL + G +T +L V +C+ A L + ++
Sbjct: 395 LIEGYRKEARIVSALNLVVELERFGVPISTDIYDYLMVSICEEGRPFA-AKSLLQRISQR 453
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
G+ + + + L + LC + +A EM + KPS ++++ + + ++
Sbjct: 454 GYVPGVEIYNKLIESLCKSDSIADALLVKSEMGHRNIKPSAITYKALICCLCRTSRSMEA 513
Query: 240 QNLSNKMALFGPSMIP 255
++L +M G M+P
Sbjct: 514 ESLMEEMLQSG--MLP 527
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 98/214 (45%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
D V ++ L+ Y ++ +++ + K+ + P VIS ++ GL + + D+ V
Sbjct: 178 DPVIFDMLVKAYVREGMIKEGFTTFRKIVEVGCVPSVISCNCLLNGLLKLNRIDQCWQVY 237
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
KEM G +P++ +N +C + + ++ M E+G P+ TYN +
Sbjct: 238 KEMARVGIHPNSYTFNILTHVFCQDGDVDKVNDFLERMEEEGFEPDIVTYNTLISCYCRK 297
Query: 129 NDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVS 188
L ++ LY M LP+ S L+ ++ KV A QL++ M+ +G I+
Sbjct: 298 GRLDDAFYLYRIMYRRNVLPDLVSYTALMNGLCKEGKVREAHQLFHRMIHRGLNPDIVSF 357
Query: 189 DVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
+ L C GK+ E+ EMI G P +V+
Sbjct: 358 NTLICGYCKEGKMRESRSLLHEMIGSGICPDKVT 391
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/243 (20%), Positives = 103/243 (42%), Gaps = 19/243 (7%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYK----IVEKMRD---------------EDISP 43
++G++P I +Y L+ + ++ ++A K +++ ++D +D +
Sbjct: 118 DLGLQPSIQNYCFLVHILAWSKEFKEAMKFLTELIKLVKDCSFNEDVFQTLLFCCQDCNW 177
Query: 44 DVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLM 103
D + + ++ G + +++ E GC P + N + R+ +
Sbjct: 178 DPVIFDMLVKAYVREGMIKEGFTTFRKIVEVGCVPSVISCNCLLNGLLKLNRIDQCWQVY 237
Query: 104 DEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQ 163
EM G+ PN+ T+N+ VF D+ + RM G P+ + L+ R+
Sbjct: 238 KEMARVGIHPNSYTFNILTHVFCQDGDVDKVNDFLERMEEEGFEPDIVTYNTLISCYCRK 297
Query: 164 EKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+++ A L+ M + ++ L + LC GK+ EA + F MI +G P VSF
Sbjct: 298 GRLDDAFYLYRIMYRRNVLPDLVSYTALMNGLCKEGKVREAHQLFHRMIHRGLNPDIVSF 357
Query: 224 RRI 226
+
Sbjct: 358 NTL 360
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 115/268 (42%), Gaps = 49/268 (18%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGG------ 54
M G+ PDIVS+N LI YCK+ ++ ++ ++ +M I PD ++ +I G
Sbjct: 345 MIHRGLNPDIVSFNTLICGYCKEGKMRESRSLLHEMIGSGICPDKVTCQVLIEGYRKEAR 404
Query: 55 ----LGLV-------------------------GQPDKARDVLKEMKEYGCYPDAAAYNA 85
L LV G+P A+ +L+ + + G P YN
Sbjct: 405 IVSALNLVVELERFGVPISTDIYDYLMVSICEEGRPFAAKSLLQRISQRGYVPGVEIYNK 464
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
I + C + + DA + EM + + P+A TY ++ + +L M+ +G
Sbjct: 465 LIESLCKSDSIADALLVKSEMGHRNIKPSAITYKALICCLCRTSRSMEAESLMEEMLQSG 524
Query: 146 CLPNTQSCMFLVKL-CKRQE--KVEIALQLWNDMVEKGFGSYILVS-DVLFDLLC---DM 198
LP+ C L+ + CK ++ K E LQ + K F + S + L C D
Sbjct: 525 MLPDPDICRALMHVYCKERDIGKAETLLQTF----AKEFQIFDSESYNTLVKTYCEDADA 580
Query: 199 GKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+L+E + M++ G P+ +FR++
Sbjct: 581 TRLMELQD---RMLKVGFAPNIQTFRQM 605
>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
Length = 913
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 107/218 (49%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
D ++Y L+ CK+ + KA I+E+ + D +Y+S+I GL G+ D+ VL
Sbjct: 368 DSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVL 427
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
+M ++GC P+ NA I + A +L DA MV KG P TYN +
Sbjct: 428 DQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKA 487
Query: 129 NDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVS 188
++ L M+ G PN + L+ + +K+++AL LW +EKGF + +
Sbjct: 488 ERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMH 547
Query: 189 DVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+++ LC GK+ +A + + EM ++ P+ V+ +
Sbjct: 548 NIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTL 585
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 103/209 (49%)
Query: 10 IVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLK 69
+VSYN LI ++ +V++A I E + ++D D ++Y ++ GL G +KA +L+
Sbjct: 334 VVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILE 393
Query: 70 EMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSN 129
E + D AY++ I C RL + +G++D+M + G PN N F ++
Sbjct: 394 EAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRAS 453
Query: 130 DLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSD 189
L + + M+ GC P + L+ + E+ A L +M++KG+ ++
Sbjct: 454 KLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYS 513
Query: 190 VLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
+L + LC KL A + + +EKG KP
Sbjct: 514 LLMNGLCQGKKLDMALNLWCQALEKGFKP 542
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 100/215 (46%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
D +Y+ +I+ C++ ++++ ++++M P+ ++I G + + A
Sbjct: 403 DTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFF 462
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
M GC+P YN I A+R +A L+ EM++KG PN TY+L
Sbjct: 463 GNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQG 522
Query: 129 NDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVS 188
L + NL+C+ + G P+ + ++ KVE ALQL+++M ++ ++
Sbjct: 523 KKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTH 582
Query: 189 DVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ L + + A K + +++ G +P +S+
Sbjct: 583 NTLMEGFYKVRDFERASKIWDHILQYGLQPDIISY 617
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 101/221 (45%), Gaps = 1/221 (0%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
G +P I SYN L++ + + ++A +SP++ +Y +I Q DK
Sbjct: 83 FGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDK 142
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
A+++L M G PD +Y I + + DA L DEM E+G++P+ YN+
Sbjct: 143 AKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILID 202
Query: 124 VFYWSNDLRSSWNLYCRMM-GTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
F+ D+ ++ ++ R++ G PN S ++ + K + + ++W+ M + G
Sbjct: 203 GFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERG 262
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ L LC G L A + + EM E G P V +
Sbjct: 263 QDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVY 303
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 105/223 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G KP+ N +I+ + + ++E A + M + P V++Y ++I GL +
Sbjct: 430 MTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAER 489
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++KEM + G P+ Y+ + C K+L A L + +EKG P+ +N+
Sbjct: 490 FSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNI 549
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
S + + LY M C+PN + L++ + E A ++W+ +++ G
Sbjct: 550 IIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYG 609
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I+ ++ LC ++ +A + +++G P+ +++
Sbjct: 610 LQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITW 652
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 99/216 (45%), Gaps = 3/216 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEK-MRDEDISPDVISYTSIIGGLGLVG 59
M E GV PD+ YN LID + K + A +I E+ ++ + P++ SY +I GL G
Sbjct: 185 MPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCG 244
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ D++ ++ MK+ D Y+ I C + L A+ + EM E G+SP+ YN
Sbjct: 245 KFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYN 304
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ + + L+ M GC S L++ KV+ A+ +W + EK
Sbjct: 305 TMLNGYLRAGRIEECLELWKVMEKEGC-RTVVSYNILIRGLFENAKVDEAISIWELLPEK 363
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
+ + VL LC G L +A S LE E G
Sbjct: 364 DCCADSMTYGVLVHGLCKNGYLNKA-LSILEEAENG 398
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 69/123 (56%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E G KPD+ +N +I C +VE A ++ +M+ + P+++++ +++ G V +
Sbjct: 537 EKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFE 596
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
+A + + +YG PD +YN ++ C R+ DA G +++ V++G+ P A T+N+
Sbjct: 597 RASKIWDHILQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILV 656
Query: 123 RVF 125
+ +
Sbjct: 657 QGY 659
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 66/147 (44%), Gaps = 1/147 (0%)
Query: 61 PDKARDVLKEMKE-YGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
PD+A D+ + M E +GC P +YN+ + + + +A GLSPN TYN
Sbjct: 69 PDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYN 128
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ ++ + L M G G P+ S L+ + + AL+L+++M E+
Sbjct: 129 ILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPER 188
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEK 206
G + ++L D G ++ A +
Sbjct: 189 GVTPDVACYNILIDGFFKKGDILNASE 215
>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
Length = 561
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 129/247 (52%), Gaps = 8/247 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G PD+++YN +I C+D +++ A ++++M PDVI+Y++II GL +
Sbjct: 267 MSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWR 326
Query: 61 PDK------ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPN 114
D A ++L+ MK+ GC P+A Y I C A++ + A L+ M++ + P+
Sbjct: 327 VDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPD 386
Query: 115 ATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWN 174
+++++ S+DL +++ ++ M C PN + L+ + +V+ A++++
Sbjct: 387 LSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFE 446
Query: 175 DMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELA 233
MVE F + + + D LC +G++ EA + MI K P S+ I+ L ++
Sbjct: 447 LMVES-FRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVS 505
Query: 234 NKQEALQ 240
+EA +
Sbjct: 506 CVEEAYE 512
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 117/242 (48%), Gaps = 7/242 (2%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P++V+Y +I+ CKD ++++A ++++ M + P+VI+Y+ ++ GL G+ DK +
Sbjct: 134 PNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTL 193
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L+EM G PD YN + C ++RL +A L+ M+ G P TYN +F
Sbjct: 194 LQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCR 253
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
S + ++ L M GC P+ + ++ R +++ A L MV ++
Sbjct: 254 SKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVIT 313
Query: 188 SDVLFDLLC-----DMGKLVEAEKSFLEMIEK-GHKPSQVSFR-RIKALMELANKQEALQ 240
+ D LC D +EA LEM+++ G P+ ++ I+ L Q+AL
Sbjct: 314 YSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALA 373
Query: 241 NL 242
L
Sbjct: 374 LL 375
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 102/214 (47%), Gaps = 4/214 (1%)
Query: 14 NCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKE 73
NC +++ + Q +A V+ R+E P+ +Y S+I GL G+ D+A ++L EM++
Sbjct: 2 NCALNLLVRAGQHGQA---VQLFREERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRD 58
Query: 74 YGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRS 133
G P A +N I+ C A R DA G + +P+ T+N+ S +
Sbjct: 59 RGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEE 118
Query: 134 SWNLYCRMMGTG-CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLF 192
++ ++ M + CLPN + ++ + K++ A++L + M E G ++ VL
Sbjct: 119 AFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLV 178
Query: 193 DLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ LC G+ + EM +G +P + + +
Sbjct: 179 EGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTL 212
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 108/232 (46%), Gaps = 6/232 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G P++++Y+ L++ CK + +K + ++++M PDVI Y +++ GL +
Sbjct: 162 MNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRR 221
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A ++++ M GCYP YN+ + +C +K++ A L+ M E+G P+ YN
Sbjct: 222 LDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNT 281
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQE-----KVEIALQLWN 174
L + L +M+ C+P+ + ++ LCK K+E A ++
Sbjct: 282 VIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILE 341
Query: 175 DMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
M + G V+ + LC K +A MI+ P SF +
Sbjct: 342 MMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMV 393
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 103/232 (44%), Gaps = 4/232 (1%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
RE P+ +Y LI CK ++++AY+++++MRD I P V + +I GL G+
Sbjct: 22 REERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRF 81
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEM-VEKGLSPNATTYNL 120
A K + C PD +N + + R+ +A + + M PN TY
Sbjct: 82 GDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTT 141
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
L + L M TGC PN + LV+ + + + L +M +G
Sbjct: 142 VINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRG 201
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMEL 232
F +++ + L + LC +L EA + MI G P+ V++ +LMEL
Sbjct: 202 FQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTY---NSLMEL 250
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 1/217 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G P+ +Y +I+ C+ R+ ++A ++ +M D ++ PD+ S++ +IG L
Sbjct: 343 MKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHD 402
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A + M E C P+ AY A I + A + + MVE P TYN
Sbjct: 403 LDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVES-FRPGVATYNS 461
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + M+ C P+ S L++ R VE A +L+ + KG
Sbjct: 462 VLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKG 521
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHK 217
F + V +VL + LC +L +A ++IE G+K
Sbjct: 522 FAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAGYK 558
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 99/230 (43%), Gaps = 3/230 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G+ P + +N +I CK + A + + +PD+I++ ++ L G+
Sbjct: 56 MRDRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGR 115
Query: 61 PDKARDVLKEMKEYG-CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
++A + + M C P+ Y I C +L A L+D M E G PN TY+
Sbjct: 116 VEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYS 175
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNT-QSCMFLVKLCKRQEKVEIALQLWNDMVE 178
+ + + L M G P+ L LCK + +++ AL+L M+
Sbjct: 176 VLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSR-RLDEALELVQLMIR 234
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKA 228
G ++ + L +L C ++ A + M E+G P +++ + A
Sbjct: 235 SGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIA 284
>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
Length = 454
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 118/266 (44%), Gaps = 31/266 (11%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLV--------- 58
PD+VSYN +ID K+ V+KAY +M D +SPD ++Y SII L
Sbjct: 9 PDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEV 68
Query: 59 ----------------------GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRL 96
GQ +KA + ++M G PD YN+ + C +
Sbjct: 69 LTVMVMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNGKC 128
Query: 97 RDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFL 156
+A + D MV++GL P+ TTY + L +L M+ G + L
Sbjct: 129 TEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNIL 188
Query: 157 VKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGH 216
+ +QEKV+ + +++ M ++G + + D LC +G+L +A +F +MI+KG
Sbjct: 189 ICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGL 248
Query: 217 KPSQVSFRRIKALMELANKQEALQNL 242
P+ V + + + +K E + L
Sbjct: 249 TPNVVVYTSLIHALCTYDKWEKAEEL 274
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 79/143 (55%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
+ G+ P+IV +N ++D CK+ +V ++ K+ + + ++PDVI+Y+++I G L G+ D
Sbjct: 280 DQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMD 339
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
A +L M G PD+ Y+ I YC R+ DA L EM G++P+ TYN+
Sbjct: 340 GAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNIIL 399
Query: 123 RVFYWSNDLRSSWNLYCRMMGTG 145
+ + ++ LY R+ +G
Sbjct: 400 HGLFRTRRTAAAKELYARITESG 422
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 104/222 (46%), Gaps = 2/222 (0%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
V P+ +YN ++ YC Q EKA I KM + I PDV++Y S++ L G+ +AR
Sbjct: 73 VMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNGKCTEAR 132
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+ M + G PD Y + Y L + L+ MV+ G+ + +N+ +
Sbjct: 133 KIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNILICAY 192
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSY 184
+ ++ +M G PN + ++ LCK +++ A+ + M++KG
Sbjct: 193 TKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLG-RLDDAMLNFEQMIDKGLTPN 251
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++V L LC K +AE+ E++++G P+ V F I
Sbjct: 252 VVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTI 293
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 118/243 (48%), Gaps = 2/243 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G+ P+ V+Y +ID CK +++ A E+M D+ ++P+V+ YTS+I L +
Sbjct: 208 MRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDK 267
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA +++ E+ + G P+ +N + + C R+ ++ L D + G++P+ TY+
Sbjct: 268 WEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYST 327
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + + L M+ G P++ + L+ + ++E AL L+ +M G
Sbjct: 328 LIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEMESNG 387
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
I+ +++ L + A++ + + E G + ++ I LM+ A +
Sbjct: 388 VNPDIITYNIILHGLFRTRRTAAAKELYARITESGTQLELSTYNII--LMDFAKTNSLMM 445
Query: 241 NLS 243
+
Sbjct: 446 HFG 448
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 113/281 (40%), Gaps = 43/281 (15%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G++PD+V+YN L+D CK+ + +A KI + M + PD+ +Y +++ G G +
Sbjct: 107 GIEPDVVTYNSLMDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEM 166
Query: 65 RDVL-----------------------------------KEMKEYGCYPDAAAYNAAIRN 89
D+L +M++ G P+A Y I
Sbjct: 167 HDLLALMVQNGMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDG 226
Query: 90 YCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPN 149
C RL DA ++M++KGL+PN Y + + L ++ G PN
Sbjct: 227 LCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPN 286
Query: 150 TQSC-MFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSF 208
L LCK +E + +L++ + G ++ L D C GK+ A K
Sbjct: 287 IVFFNTILDSLCKEGRVIE-SKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLL 345
Query: 209 LEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALF 249
M+ G KP V++ L N + + + +ALF
Sbjct: 346 TGMVSVGLKPDSVTYS------TLINGYCKINRMEDALALF 380
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 70/147 (47%), Gaps = 9/147 (6%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+ +GV PD+++Y+ LID YC +++ A K++ M + PD ++Y+++I G + +
Sbjct: 313 LGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINR 372
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A + KEM+ G PD YN + +R A L + E G +TYN+
Sbjct: 373 MEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITESGTQLELSTYNI 432
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCL 147
F +N L MM GC
Sbjct: 433 ILMDFAKTNSL---------MMHFGCF 450
>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 614
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 105/212 (49%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+KPD+ ++N L+D CK+ +++KA ++ M + + ++++Y S++ G LV Q +KA
Sbjct: 270 IKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKAT 329
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
V M G PD +Y+ I C K + +A L EM K ++PN TYN
Sbjct: 330 FVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGL 389
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ +W+L M G + + L+ + +V+ A+ L + ++G I
Sbjct: 390 LKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNI 449
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHK 217
+L D LC G+L +A+ + +++ KG+
Sbjct: 450 YTYTILVDGLCKNGRLKDAQAVYQDLLIKGYH 481
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 105/221 (47%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
V+P++V YN +ID CKD+ V A + +M + I PDV++YT++I G +VG+ +A
Sbjct: 200 VQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAV 259
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+ +M PD +N + C ++ A ++ M+++G+ N TYN +
Sbjct: 260 GLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGY 319
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ + ++ M G P+ QS ++ + + V+ A+ L+ +M K
Sbjct: 320 FLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNT 379
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + L D L G++ +A EM +G +++ +
Sbjct: 380 VTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSL 420
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 111/232 (47%), Gaps = 1/232 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV +IV+YN L+D Y +Q KA + M ++PDV SY+ +I GL
Sbjct: 300 MIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKM 359
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A ++ KEM P+ YN+ I R+ DA L++EM +G + TY+
Sbjct: 360 VDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSS 419
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++ + + L ++ G PN + LV + +++ A ++ D++ KG
Sbjct: 420 LLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKG 479
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALME 231
+ + + +V+ + LC G EA +M + G P V++ ++AL E
Sbjct: 480 YHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFE 531
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 112/255 (43%), Gaps = 2/255 (0%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
++PD+ ++N LI+ +C + A+ ++ K+ PD ++ T++I GL L G+ +A
Sbjct: 95 IQPDLFTFNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREAL 154
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
++ G + D +Y I C R A ++ ++ + PN YN
Sbjct: 155 HFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSL 214
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ + +L M+ P+ + L+ C +++ A+ L+N M+ K +
Sbjct: 215 CKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDV 274
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNK 245
++L D LC G++ +A MI++G + V++ + L ++ + N
Sbjct: 275 YTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNT 334
Query: 246 MALFGPSMIPKREEY 260
MA G + P + Y
Sbjct: 335 MARRG--VTPDVQSY 347
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 106/262 (40%), Gaps = 41/262 (15%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGL------- 55
++G PD V+ LI C + +V +A + + + D +SY ++I GL
Sbjct: 127 KLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETR 186
Query: 56 ----------GLVGQPD------------------KARDVLKEMKEYGCYPDAAAYNAAI 87
GL+ QP+ A D+ EM +PD Y I
Sbjct: 187 AALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLI 246
Query: 88 RNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCL 147
I RL++A GL ++M+ K + P+ T+N+ +++ + N+ M+ G
Sbjct: 247 YGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVD 306
Query: 148 PNT---QSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEA 204
N S M L K++ K A ++N M +G + ++ + LC + EA
Sbjct: 307 SNIVTYNSLMDGYFLVKQENK---ATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEA 363
Query: 205 EKSFLEMIEKGHKPSQVSFRRI 226
F EM K P+ V++ +
Sbjct: 364 VNLFKEMHSKSMAPNTVTYNSL 385
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 66/145 (45%), Gaps = 35/145 (24%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGL----- 55
M G D+++Y+ L+D CK+ QV+KA ++ K++D+ I P++ +YT ++ GL
Sbjct: 405 MHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGR 464
Query: 56 ----------------------------GLV--GQPDKARDVLKEMKEYGCYPDAAAYNA 85
GL G D+A ++ +M++ GC PDA Y
Sbjct: 465 LKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYET 524
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKG 110
+R + A L+ EM+ +G
Sbjct: 525 LVRALFENDKNDKAVKLLREMIVQG 549
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 101/221 (45%), Gaps = 5/221 (2%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
V+P I +N ++ K A ++M + I PD+ ++ +I +G + A
Sbjct: 61 VQP-IFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAF 119
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
VL ++ + G +PD I+ C+ ++R+A D+++ KG + +Y
Sbjct: 120 SVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGL 179
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDM-VEKGFGS 183
+ + R++ + ++ G PN ++ LCK + + A L ++M V++ F
Sbjct: 180 CKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIH-ASDLCSEMIVKRIFPD 238
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
+ + +++ L +G+L EA F +M+ K KP +F
Sbjct: 239 VVTYTTLIYGCLI-VGRLKEAVGLFNQMLLKNIKPDVYTFN 278
>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1246
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 124/246 (50%), Gaps = 4/246 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ P++ +YN +I K R++++A +++E M + P SY I G G
Sbjct: 401 MTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGD 460
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
P KA D + MK+ G P AA NA++ R+ +A + +++ + GLSP++ TYN+
Sbjct: 461 PAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNM 520
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + + + L M+ GC P+ L+ + +V+ A +++ +
Sbjct: 521 LMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLK 580
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
++ ++L L GK+++A + F M E G P+ ++F +L++ +K +A+
Sbjct: 581 LAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITF---NSLLDCLSKNDAV- 636
Query: 241 NLSNKM 246
+L+ KM
Sbjct: 637 DLALKM 642
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 85/152 (55%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G++PD+ SY L++ C ++++A + E+++ + PD +SY II GLG +
Sbjct: 962 MVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRR 1021
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + EMK G PD YNA I + IA ++ A + +E+ GL P+ TYN
Sbjct: 1022 LDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNA 1081
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS 152
R S + +++++ +MM GC PNT++
Sbjct: 1082 LIRGHSLSGNKDQAFSVFKKMMVVGCSPNTET 1113
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 124/260 (47%), Gaps = 2/260 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G +P+ +++N +I K + KA + ++ D SP +Y +I GL G+
Sbjct: 857 MRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGR 916
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A + +EM +YGC P++ YN I + + + A L +MV++G+ P+ +Y +
Sbjct: 917 SEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTI 976
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + + + TG P+T S F++ + +++ AL L+++M +G
Sbjct: 977 LVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRG 1036
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ + L L GK+ A K + E+ G +PS ++ + L+ ++
Sbjct: 1037 ISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAF 1096
Query: 241 NLSNKMALFGPSMIPKREEY 260
++ KM + G S P E +
Sbjct: 1097 SVFKKMMVVGCS--PNTETF 1114
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 102/225 (45%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
+ +G+ P + SYNCL+D EKA ++ E M+ P+ +Y ++ G +
Sbjct: 788 KNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRI 847
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
+K D+ EM+ GC P+A +N I + L A L E++ SP TY
Sbjct: 848 NKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPL 907
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
+ + ++ M+ GC PN+ L+ + +++ A +L+ MV++G
Sbjct: 908 IDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGI 967
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ +L + LC G++ EA + F E+ G P VS+ I
Sbjct: 968 RPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFI 1012
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 98/226 (43%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +GVKP SY ID Y K KA E M+ I P + + + + L G+
Sbjct: 436 MESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGR 495
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A D+ ++ + G PD+ YN ++ Y A ++ A+ L+ EM+ KG P+ N
Sbjct: 496 ISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINS 555
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
Y + + ++W ++ R+ P + L+ ++ K+ AL+L+ M E G
Sbjct: 556 LINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESG 615
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + L D L + A K F M P +++ I
Sbjct: 616 CPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTI 661
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 118/253 (46%), Gaps = 10/253 (3%)
Query: 1 MREMGVKPDIVSYNCLIDV----YCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLG 56
M E+G + SYN LI + +C + A K+ ++M E + P + +Y++++ LG
Sbjct: 192 MTEVGFILNAYSYNGLIHLLLPGFCNE-----ALKVYKRMISEGMKPSMKTYSALMVALG 246
Query: 57 LVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNAT 116
G K ++L+EMK G P+ Y IR A+R+ DA G+ EM ++G P+
Sbjct: 247 RRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVI 306
Query: 117 TYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDM 176
TY + + L + LY +M + P+ + + L+ + +E + WN+M
Sbjct: 307 TYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEM 366
Query: 177 VEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANK 235
G+ ++ +L + LC G + A M KG P+ ++ I L++
Sbjct: 367 EVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRL 426
Query: 236 QEALQNLSNKMAL 248
EAL+ L N +L
Sbjct: 427 DEALELLENMESL 439
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 98/223 (43%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G PD+++Y LID C +++KA ++ KMR SPD ++Y +++ G VG
Sbjct: 296 MDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGD 355
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ + EM+ G PD Y I C + + A ++D M KG+ PN TYN
Sbjct: 356 LETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNT 415
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L + L M G P S + + + A+ + M ++G
Sbjct: 416 MICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRG 475
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I + L + G++ EAE F ++ + G P V++
Sbjct: 476 IMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTY 518
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 103/218 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR PD V+Y L+D + K +E + +M + +PDV++YT +I L G
Sbjct: 331 MRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGD 390
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A D+L M G +P+ YN I A+RL +A L++ M G+ P A +Y L
Sbjct: 391 VDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVL 450
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + S D + + + M G +P+ +C + ++ A ++ND+ + G
Sbjct: 451 FIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCG 510
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
+ ++L G++ +A + EMI KG +P
Sbjct: 511 LSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEP 548
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 112/250 (44%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G P+ +YN L+D + K +++ K Y + +MR P+ I++ II L
Sbjct: 822 MKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNN 881
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA D+ E+ P Y I A R A + +EM++ G PN+ YN+
Sbjct: 882 LNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNI 941
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F S ++ + L+ +M+ G P+ +S LV+ +++ A+Q + ++ G
Sbjct: 942 LINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTG 1001
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ + + + L +L EA F EM +G P ++ + + +A K +
Sbjct: 1002 LDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAV 1061
Query: 241 NLSNKMALFG 250
+ ++ L G
Sbjct: 1062 KMYEELQLVG 1071
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 100/219 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ +G++P+I +Y I + R+++ A+ I ++M DE PDVI+YT +I L G+
Sbjct: 261 MKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGK 320
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA+++ +M+ PD Y + + L +EM G +P+ TY +
Sbjct: 321 LDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTI 380
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
S D+ ++++ M G PN + ++ + +++ AL+L +M G
Sbjct: 381 LIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLG 440
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
+ D G +A +F M ++G PS
Sbjct: 441 VKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPS 479
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 99/219 (45%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P +Y LID K + E+A KI E+M D P+ + Y +I G G G+ D A ++
Sbjct: 899 PTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACEL 958
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
K+M + G PD +Y + CI R+ +A +E+ GL P+ +YN
Sbjct: 959 FKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGK 1018
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
S L + +L+ M G P+ + L+ KV++A++++ ++ G +
Sbjct: 1019 SRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFT 1078
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ L G +A F +M+ G P+ +F ++
Sbjct: 1079 YNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTETFAQL 1117
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 111/237 (46%), Gaps = 1/237 (0%)
Query: 14 NCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKE 73
N ++++ + R++E + + M+ + I ++ +Y +I L + G +A L++M E
Sbjct: 135 NYMLEILREQRRIEDMVFVFDLMQKKVIYRNLTTYMTIFKALSIKGGIGRAPFALRKMTE 194
Query: 74 YGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRS 133
G +A +YN I + + +A + M+ +G+ P+ TY+ D R
Sbjct: 195 VGFILNAYSYNGLI-HLLLPGFCNEALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRK 253
Query: 134 SWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFD 193
NL M G PN + ++ R +++ A ++ +M ++G G ++ VL D
Sbjct: 254 IMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLID 313
Query: 194 LLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFG 250
LC GKL +A++ +++M H P +V++ + E ++ N+M + G
Sbjct: 314 ALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDG 370
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 93/219 (42%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+KP + +Y+ L+ + K ++E+M+ + P++ +YT I LG + D A
Sbjct: 230 GMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDA 289
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ KEM + GC PD Y I C A +L A L +M SP+ TY
Sbjct: 290 WGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDK 349
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
F DL + + M G P+ + L++ + V+ A + + M KG
Sbjct: 350 FGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPN 409
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + + L +L EA + M G KP+ S+
Sbjct: 410 LHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSY 448
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 64/155 (41%)
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
K K G +P +YN + + A L ++M G PN TYNL S
Sbjct: 785 KFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKS 844
Query: 129 NDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVS 188
+ ++LY M GC PN + ++ + + AL L+ +++ F
Sbjct: 845 KRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTY 904
Query: 189 DVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
L D L G+ +A K F EM++ G P+ V +
Sbjct: 905 GPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIY 939
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 1/110 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G P+ +++N L+D K+ V+ A K+ +M + +PDV++Y +II GL G+
Sbjct: 611 MTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGR 670
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKG 110
D A +MK++ PD I R+ DA ++ E V +
Sbjct: 671 IDYAFWFFHQMKKF-LSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQA 719
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/278 (17%), Positives = 110/278 (39%), Gaps = 39/278 (14%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M M PD+++YN +I ++ +++ A+ +M+ + +SPD ++ ++I G+ G+
Sbjct: 646 MTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQMK-KFLSPDYVTLCTLIPGVVRHGR 704
Query: 61 PDKARDVLKEMKEYGCYPDAAAY--------------------------NAA-------- 86
+ A V+ E C + + N+
Sbjct: 705 VEDAIKVVMEFVHQACLQTNSQFWGELMECILTEAEIEEAISFAEILVCNSVCQDDHVML 764
Query: 87 --IRNYCIAKRLRDASGLMDEMVEK-GLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMG 143
I+ C K+ DA + D+ + G+ P +YN SN + L+ M
Sbjct: 765 PLIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKS 824
Query: 144 TGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVE 203
G PN + L+ + +++ L+++M +G + +++ L L +
Sbjct: 825 AGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNK 884
Query: 204 AEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQ 240
A + E++ P+ ++ I L++ ++A++
Sbjct: 885 ALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMK 922
>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 127/272 (46%), Gaps = 36/272 (13%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GVK D + + L++ CK+ +VEKA ++++ + + + P + Y +I+ G +G D+A
Sbjct: 237 GVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRA 296
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL---- 120
+++M+ G P+ A+N+ I +C + + A + +MV KG++P+ TYN+
Sbjct: 297 ILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDG 356
Query: 121 ------FFRVFYWSNDLR------------SSWNLYCR-------------MMGTGCLPN 149
F R F ++ S N C+ M+G G LPN
Sbjct: 357 YGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPN 416
Query: 150 TQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFL 209
L+ K+ AL+ +++M + G G+ I+ + L LC MGKL EAE+ F
Sbjct: 417 ANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFF 476
Query: 210 EMIEKGHKPSQVSFRR-IKALMELANKQEALQ 240
+ GH P +++ I N Q+ L+
Sbjct: 477 LITSTGHCPDVITYNSLISGYSNAGNSQKCLE 508
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 116/227 (51%), Gaps = 1/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ V P++ YN LI CK++++ A K+ +M ++ P+ +++ ++I G G+
Sbjct: 92 MKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGE 151
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A + + MK+ P +N+ + C A+R+ +A +++E+ G P+ TY++
Sbjct: 152 VDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSI 211
Query: 121 FFRVFYWSND-LRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
F S+D ++ +LY +G G + +C L+ ++ KVE A ++ +VE
Sbjct: 212 IFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEH 271
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G ++ + + + C +G + A + +M +G +P+ ++F +
Sbjct: 272 GLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSV 318
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 115/260 (44%), Gaps = 3/260 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G KP+++SY LI+ CKD ++ +A ++ M + P+ Y +I G VG+
Sbjct: 373 MEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGK 432
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A EM + G YN+ I+ C +L++A + + G P+ TYN
Sbjct: 433 LREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNS 492
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + + LY M G P + L+ C + E +++ L+N+M++
Sbjct: 493 LISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSK-EGIKLKETLFNEMLQMN 551
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+V + + + G + +A EM++ G +P ++ + K +
Sbjct: 552 LSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETK 611
Query: 241 NLSNKMALFGPSMIPKREEY 260
+L + M G +IP+ + Y
Sbjct: 612 DLVDDMKAKG--LIPEADTY 629
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 88/180 (48%), Gaps = 1/180 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+++G+KP I +++ LI C ++ + +M ++SPD + Y ++I G
Sbjct: 513 MKKLGLKPTINTFHPLIS-GCSKEGIKLKETLFNEMLQMNLSPDRVVYNAMIHCYQETGH 571
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA + KEM + G PD YN+ I + +L + L+D+M KGL P A TY+L
Sbjct: 572 VQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSL 631
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ D ++ Y M+ G LPN C L ++ +++ A + ++M+ G
Sbjct: 632 LIQGHCDLKDFNGAYVWYREMLENGFLPNVCICNELSTGLRKDGRLQEAQSICSEMIANG 691
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 101/219 (46%), Gaps = 1/219 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ IV+YN LI CK ++++A ++ + PDVI+Y S+I G G
Sbjct: 443 MSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGN 502
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
K ++ + MK+ G P ++ I C + ++ L +EM++ LSP+ YN
Sbjct: 503 SQKCLELYETMKKLGLKPTINTFHPLISG-CSKEGIKLKETLFNEMLQMNLSPDRVVYNA 561
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + ++ +++L M+ G P+ ++ L+ ++ K+ L +DM KG
Sbjct: 562 MIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKG 621
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
+L CD+ A + EM+E G P+
Sbjct: 622 LIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPN 660
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 113/264 (42%), Gaps = 47/264 (17%)
Query: 3 EMGVK---PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVG 59
EM V+ P+ V++N LID YCK +V+ A + E+M+ E + P +I++ S++ GL
Sbjct: 126 EMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKAR 185
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYN---------------------------AAIRNY-- 90
+ ++AR +L E+K G PD Y+ I NY
Sbjct: 186 RIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTC 245
Query: 91 -------CIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMG 143
C ++ A ++ +VE GL P YN + D+ + +M
Sbjct: 246 SILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMES 305
Query: 144 TGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLV 202
G PN + ++ K C+ Q ++ A + MV KG + ++L D G+L
Sbjct: 306 RGLRPNCIAFNSVIDKFCEMQ-MIDKAEEWVKKMVGKGIAPSVETYNILID---GYGRLC 361
Query: 203 EAEKSFL---EMIEKGHKPSQVSF 223
+ F EM E G KP+ +S+
Sbjct: 362 VFSRCFQILEEMEENGEKPNVISY 385
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 89/208 (42%), Gaps = 1/208 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD+++YN LI Y +K ++ E M+ + P + ++ +I G G K +
Sbjct: 485 PDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEGIKLK-ETL 543
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
EM + PD YNA I Y ++ A L EMV+ G+ P+ TYN
Sbjct: 544 FNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLK 603
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
L + +L M G +P + L++ + A + +M+E GF + +
Sbjct: 604 EGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPNVCI 663
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
+ L L G+L EA+ EMI G
Sbjct: 664 CNELSTGLRKDGRLQEAQSICSEMIANG 691
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 100/228 (43%), Gaps = 3/228 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G +PD + Y + K ++ A ++ E M+ + P+V Y +IGGL +
Sbjct: 57 MVGLGFRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKR 116
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A + EM P+ +N I YC A + A GL + M ++ + P+ T+N
Sbjct: 117 IRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNS 176
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPN--TQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
+ + + + + G +P+ T S +F L K + AL L+ + +
Sbjct: 177 LLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIF-DGLLKSDDGAGAALDLYREAIG 235
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
KG +L + LC GK+ +AE+ ++E G P +V + I
Sbjct: 236 KGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTI 283
>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 770
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 117/225 (52%), Gaps = 2/225 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M V P++V+Y+CL++ CK ++ ++A ++++ M + PDV++YT + GL G+
Sbjct: 260 MLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGR 319
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A VL M + G P+ YNA I C R+ DA G+++ M +KG P+ TY+
Sbjct: 320 ASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYST 379
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGT--GCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
+ + + +L +M P+ + +++ +Q ++ A +++ MVE
Sbjct: 380 LVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVE 439
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+GF S I+ ++L D GKL +A + + + ++ G P+ ++
Sbjct: 440 RGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATY 484
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 110/224 (49%), Gaps = 4/224 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G ++ ++N L+ +C+ KA + M+ + PD +SY ++I GL + +A
Sbjct: 124 GFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCKGKRLVEA 183
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+++ KEMK C P++ ++A I +C + + GL++EM + GL + Y+
Sbjct: 184 KELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISG 243
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPN--TQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
F D+ L+ M+ PN T SC+ + LCK+Q+ E A Q+ + M
Sbjct: 244 FCSKGDIERGKELFNEMLRKNVTPNVVTYSCL-MNALCKKQKWKEAA-QMLDTMTGCKVR 301
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ VL D L G+ +A K M+++G +P+ V++ I
Sbjct: 302 PDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAI 345
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 115/237 (48%), Gaps = 1/237 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD VSYN +I+ CK +++ +A ++ ++M+ + P+ ++++++I G G ++ +
Sbjct: 162 PDCVSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGL 221
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L+EM++ G D Y+A I +C + L +EM+ K ++PN TY+
Sbjct: 222 LEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCK 281
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ + + M G P+ + L + + A+++ + MV++G +
Sbjct: 282 KQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVT 341
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLS 243
+ + + LC G++ +A M +KG KP V++ +K L + EA+ L+
Sbjct: 342 YNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLN 398
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 108/246 (43%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
+E +KPD+ ++N +I CK R++ A ++ M + ++++Y +I G G+
Sbjct: 403 KEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKL 462
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
KA ++ K+ + G P+AA Y I C + L A GL ++ G P + YN
Sbjct: 463 TKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTL 522
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
+ + + NL+ M P+ S ++ + VE A +L +M+
Sbjct: 523 MASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNL 582
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQN 241
+ +L + +G+L EA + M+ GH P V F + L K E + +
Sbjct: 583 VPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVS 642
Query: 242 LSNKMA 247
+ +MA
Sbjct: 643 MLQQMA 648
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 104/225 (46%), Gaps = 2/225 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +MG++ D+ Y+ LI +C +E+ ++ +M ++++P+V++Y+ ++ L +
Sbjct: 225 MEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQK 284
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A +L M PD AY R DA ++D MV++G PN TYN
Sbjct: 285 WKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNA 344
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + M G P+ + LVK K++ A+ L N ++ K
Sbjct: 345 IINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKE 404
Query: 181 FG--SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
F + +++ LC +L A++ + M+E+G + V++
Sbjct: 405 FHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTY 449
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 91/202 (45%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ P+ +Y LI+ CK + + A + K R P V Y +++ L ++A
Sbjct: 476 GISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQA 535
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
R++ +EM+ PD ++N I A + A L+ EM+ L P+ T+++
Sbjct: 536 RNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINR 595
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
F L + +LY RM+ G +P+ L+K + K E + + M +K
Sbjct: 596 FLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADKDVVLD 655
Query: 185 ILVSDVLFDLLCDMGKLVEAEK 206
++ + LC+M K V+ EK
Sbjct: 656 SKLTSTILACLCNMSKDVDIEK 677
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 88/196 (44%), Gaps = 6/196 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G +IV+YN LID Y ++ KA ++ + D ISP+ +YT +I GL +
Sbjct: 437 MVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQM 496
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A+ + + + G P + YN + + C + A L EM P+ ++N+
Sbjct: 497 LSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNI 556
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ D+ S+ L M+ +P+ + L+ + +++ A L+ MV G
Sbjct: 557 IIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCG 616
Query: 181 FGSYILVSD-VLFDLL 195
V D VLFD L
Sbjct: 617 H-----VPDAVLFDSL 627
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 86/217 (39%), Gaps = 2/217 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P S N LID K + + + KM + P S +++I +P A V
Sbjct: 57 PSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFAFGV 116
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L + + G + + +N ++ +C + A L M L P+ +YN
Sbjct: 117 LGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCK 176
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYIL 186
L + L+ M G C PN+ + L+ CK + VE L +M + G +
Sbjct: 177 GKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGD-VEEGFGLLEEMEKMGLEGDVF 235
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
V L C G + ++ F EM+ K P+ V++
Sbjct: 236 VYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTY 272
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 59/109 (54%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR PD+VS+N +ID K VE A +++ +M + ++ PD I+++ +I +GQ
Sbjct: 542 MRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQ 601
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEK 109
D+A + + M G PDA +++ ++ Y + + ++ +M +K
Sbjct: 602 LDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADK 650
>gi|302772380|ref|XP_002969608.1| hypothetical protein SELMODRAFT_91676 [Selaginella moellendorffii]
gi|300163084|gb|EFJ29696.1| hypothetical protein SELMODRAFT_91676 [Selaginella moellendorffii]
Length = 408
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 121/244 (49%), Gaps = 2/244 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G KPD +YN +I+ CK +V++A K +M ++ PDV +Y ++ G+G + +
Sbjct: 81 GNKPDRFAYNVVINSLCKLGKVDEALKYTREMSEKGYPPDVYTYNFVMEGIGNTTNLEAS 140
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
V +EM C P+ +N + +C A + A+ L+ +MV G SP + +
Sbjct: 141 AKVFEEMVANKCQPNIVTFNVLLDTFCKAGKTAQAADLVRKMVSYGCSPGERAFRILMDA 200
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDM-VEKGFGS 183
F S ++ ++ L +M PN+ + ++ + K E+AL+L+ D+ GF
Sbjct: 201 FGRSGEVDAAHTLVRDLMKMNFYPNSLTLNVIMTRLNKVGKPEVALELYYDLKAAGGFVH 260
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEM-IEKGHKPSQVSFRRIKALMELANKQEALQNL 242
++ +++ DLL +GK+ EA K+F E+ +E+ P ++ I M + +A L
Sbjct: 261 DLITYNIIIDLLGKVGKVDEAWKAFEELKLEQRLVPDHYTYNTIVVRMAKVGRLQACFEL 320
Query: 243 SNKM 246
+M
Sbjct: 321 IKEM 324
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 82/224 (36%), Gaps = 36/224 (16%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + V + ++Y L Y ++EKA K + + P + Y ++ L G
Sbjct: 8 MAKAKVAKNEITYMILFQCYFDGGEIEKALKFFDVFEHSE-KPAMKHYKYVMHKLVKAGC 66
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ K M G PD AYN I + C ++ +A EM EKG P+ TYN
Sbjct: 67 FQVVPLIFKNMIWAGNKPDRFAYNVVINSLCKLGKVDEALKYTREMSEKGYPPDVYTYNF 126
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ +L +S ++ M+ C PN
Sbjct: 127 VMEGIGNTTNLEASAKVFEEMVANKCQPN------------------------------- 155
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
I+ +VL D C GK +A +M+ G P + +FR
Sbjct: 156 ----IVTFNVLLDTFCKAGKTAQAADLVRKMVSYGCSPGERAFR 195
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 61/114 (53%), Gaps = 1/114 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMR-DEDISPDVISYTSIIGGLGLVGQPDK 63
G D+++YN +ID+ K +V++A+K E+++ ++ + PD +Y +I+ + VG+
Sbjct: 257 GFVHDLITYNIIIDLLGKVGKVDEAWKAFEELKLEQRLVPDHYTYNTIVVRMAKVGRLQA 316
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
+++KEM+ D ++Y + + A + A ++ EM G SP T
Sbjct: 317 CFELIKEMEGRNVSLDRSSYCNLVEAFGRAGHIDQACSMLREMKASGHSPQMNT 370
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 58/126 (46%), Gaps = 1/126 (0%)
Query: 44 DVISYTSIIGGLGLVGQPDKARDVLKEMK-EYGCYPDAAAYNAAIRNYCIAKRLRDASGL 102
D+I+Y II LG VG+ D+A +E+K E PD YN + RL+ L
Sbjct: 261 DLITYNIIIDLLGKVGKVDEAWKAFEELKLEQRLVPDHYTYNTIVVRMAKVGRLQACFEL 320
Query: 103 MDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKR 162
+ EM + +S + ++Y F + + + ++ M +G P + LV +R
Sbjct: 321 IKEMEGRNVSLDRSSYCNLVEAFGRAGHIDQACSMLREMKASGHSPQMNTLQTLVNHARR 380
Query: 163 QEKVEI 168
++E+
Sbjct: 381 LNRLEV 386
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 50/104 (48%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E + PD +YN ++ K +++ ++++++M ++S D SY +++ G G D
Sbjct: 291 EQRLVPDHYTYNTIVVRMAKVGRLQACFELIKEMEGRNVSLDRSSYCNLVEAFGRAGHID 350
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEM 106
+A +L+EMK G P + + RL LM E+
Sbjct: 351 QACSMLREMKASGHSPQMNTLQTLVNHARRLNRLEVVQLLMPEL 394
>gi|302143409|emb|CBI21970.3| unnamed protein product [Vitis vinifera]
Length = 375
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 106/248 (42%), Gaps = 38/248 (15%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ---- 60
G +PD+++Y LI+ CKDRQ+ +A + M + ISP+ +Y+S+I GL ++G
Sbjct: 110 GFQPDVLTYGTLINGLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEA 169
Query: 61 ----------------------------------PDKARDVLKEMKEYGCYPDAAAYNAA 86
DKA + +EM + G PD YN
Sbjct: 170 IRLFYAMIHRKIMPDQLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTL 229
Query: 87 IRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGC 146
I C RLRDA L EMV G P+ TY + F ++ L + L + GT
Sbjct: 230 IHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNL 289
Query: 147 LPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEK 206
P+ ++ R ++E A L++ + KG + ++ + LC G L EA K
Sbjct: 290 DPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASK 349
Query: 207 SFLEMIEK 214
F EM E
Sbjct: 350 LFGEMDEN 357
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 106/227 (46%), Gaps = 3/227 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ + + N LI+ +C ++ A+ ++ + P ++T++I GL + G+
Sbjct: 36 MDSFGIPHNTYTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGK 95
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + +M G PD Y I C ++L +A L +M+ KG+SPN TY+
Sbjct: 96 IGEALQLFDKMTGEGFQPDVLTYGTLINGLCKDRQLTEALSLFSDMLAKGISPNNFTYSS 155
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEI---ALQLWNDMV 177
+ + L+ M+ +P+ + LV ++ ++I A+ L+ +M
Sbjct: 156 LIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMIQIMDKAMGLFEEMS 215
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
++G + + L LC +G+L +A F EM+ G P V++R
Sbjct: 216 QQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYR 262
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 88/182 (48%), Gaps = 3/182 (1%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVE---KAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
+ PD +++N L+D CK+ ++ KA + E+M + + PD ++Y ++I GL VG+
Sbjct: 181 IMPDQLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLR 240
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
A + EM YG PD Y C RL +A L+ + L P+ Y++
Sbjct: 241 DAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVM 300
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
+ +L ++ +L+ ++ G P+ ++ ++ +Q + A +L+ +M E
Sbjct: 301 DGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENDIE 360
Query: 183 SY 184
SY
Sbjct: 361 SY 362
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 93/208 (44%), Gaps = 5/208 (2%)
Query: 43 PDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGL 102
P ++ ++ ++ + + + K+M +G + N I ++C RL A +
Sbjct: 8 PSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSV 67
Query: 103 MDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCK 161
+ ++++ G P+ T+ R + + L+ +M G G P+ + L+ LCK
Sbjct: 68 LGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCK 127
Query: 162 RQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQV 221
++ E AL L++DM+ KG L LC +G EA + F MI + P Q+
Sbjct: 128 DRQLTE-ALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQL 186
Query: 222 SFRRIKALMELANKQEALQNLSNKMALF 249
+F L++ K+ +Q + M LF
Sbjct: 187 TF---NTLVDALCKEGMIQIMDKAMGLF 211
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 64/123 (52%), Gaps = 1/123 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PD+V+Y L D CK+ ++ +A +++ + ++ PD+ Y+ ++ G+ G+ + A
Sbjct: 253 GQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAA 312
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNAT-TYNLFFR 123
RD+ ++ G +PD Y I C L +AS L EM E + +T + N F
Sbjct: 313 RDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENDIESYSTFSRNAFKG 372
Query: 124 VFY 126
+FY
Sbjct: 373 IFY 375
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 113/264 (42%), Gaps = 9/264 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M M P IV ++ L+ + + + ++M I + + +I + +
Sbjct: 1 MLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNR 60
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A VL ++ + G P A + IR C+ ++ +A L D+M +G P+ TY
Sbjct: 61 LGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGT 120
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
L + +L+ M+ G PN + L+ LC E A++L+ M+ +
Sbjct: 121 LINGLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKE-AIRLFYAMIHR 179
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKS---FLEMIEKGHKPSQVSFRR-IKALMELANK 235
L + L D LC G + +K+ F EM ++G P V++ I L +
Sbjct: 180 KIMPDQLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRL 239
Query: 236 QEALQNLSNKMALFG--PSMIPKR 257
++A+ L ++M ++G P ++ R
Sbjct: 240 RDAIA-LFHEMVVYGQIPDLVTYR 262
>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 523
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 105/218 (48%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ P+++ + LID + K+ + +A + ++M + P+V +Y S+I G + G A+
Sbjct: 250 IDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAK 309
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+ M GC+PD YN I +C +KR+ D L EM +GL +A TYN +
Sbjct: 310 YMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGY 369
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ L + ++ RM+ G P+ + L+ K+E AL + D+ + I
Sbjct: 370 CQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDI 429
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ +++ LC KL EA F + KG KP +++
Sbjct: 430 ITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAY 467
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 105/217 (48%), Gaps = 4/217 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G++ D V+YN LI + A +++ M I P+VI +T++I G
Sbjct: 210 MEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGN 269
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR++ KEM P+ YN+ I +CI L DA + D MV KG P+ TYN
Sbjct: 270 LLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNT 329
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F S + L+C M G + + + L+ + K+ +A +++N MV+ G
Sbjct: 330 LITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCG 389
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHK 217
I+ ++L D LC+ GK+ +A L M+E K
Sbjct: 390 VSPDIVTYNILLDCLCNNGKIEKA----LVMVEDLQK 422
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 105/223 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P++V YN +I+ CK+R + A ++ M + I D ++Y ++I GL G+
Sbjct: 175 MDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGR 234
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +L++M + P+ + A I + L +A L EM+ + + PN TYN
Sbjct: 235 WTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNS 294
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F L + ++ M+ GC P+ + L+ + ++VE ++L+ +M +G
Sbjct: 295 LINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQG 354
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ L C GKL A+K F M++ G P V++
Sbjct: 355 LVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTY 397
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 91/182 (50%), Gaps = 2/182 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD+V+YN LI +CK ++VE K+ +M + + D +Y ++I G G+
Sbjct: 315 MVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGK 374
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A+ V M + G PD YN + C ++ A +++++ + + + TYN+
Sbjct: 375 LNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNI 434
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+ ++ L+ +W L+ + G P+ + + ++ LC++ + E A +L M E
Sbjct: 435 IIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQRE-ADKLCRRMKED 493
Query: 180 GF 181
GF
Sbjct: 494 GF 495
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 65/128 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV PDIV+YN L+D C + ++EKA +VE ++ ++ D+I+Y II GL +
Sbjct: 385 MVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDK 444
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + + + G PDA AY I C R+A L M E G P+ Y+
Sbjct: 445 LKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDE 504
Query: 121 FFRVFYWS 128
R Y S
Sbjct: 505 TLRDHYTS 512
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 96/226 (42%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G+ D+ S+ LI +C+ ++ A ++ KM P +++ S++ G +
Sbjct: 105 MENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNR 164
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++ M +G P+ YN I C + L +A + M +KG+ +A TYN
Sbjct: 165 FQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNT 224
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
S + L M+ PN L+ ++ + A L+ +M+ +
Sbjct: 225 LISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRS 284
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + L + C G L +A+ F M+ KG P V++ +
Sbjct: 285 VVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTL 330
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 89/216 (41%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P IV + ++ V K + + + KM + IS D+ S+T +I + A +
Sbjct: 77 PSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALAL 136
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L +M + G P + + +C R ++A L+D M G PN YN
Sbjct: 137 LGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCK 196
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ DL ++ ++ M G + + L+ + A +L DMV++ ++
Sbjct: 197 NRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIF 256
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
L D G L+EA + EMI + P+ ++
Sbjct: 257 FTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTY 292
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 102/224 (45%), Gaps = 4/224 (1%)
Query: 25 QVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYN 84
+ + A+ + +M P ++ +T ++ + + + D + +M+ G D ++
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 85 AAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGT 144
I +C RL A L+ +M++ G P+ T F N + + +L M G
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178
Query: 145 GCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVE 203
G +PN ++ LCK ++ + AL+++ M +KG + + + L L + G+ +
Sbjct: 179 GFVPNVVIYNTVINGLCKNRD-LNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTD 237
Query: 204 AEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLSNKM 246
A + +M+++ P+ + F I ++ N EA +NL +M
Sbjct: 238 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEA-RNLYKEM 280
>gi|326508346|dbj|BAJ99440.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 819
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 114/258 (44%), Gaps = 43/258 (16%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GVKP+IVSYN L+ Y +A+ I + ++ + PDV+SYT+++ G QP+KA
Sbjct: 360 GVKPNIVSYNALLGAYASHGMHTEAFGIFKLLKQNGLRPDVVSYTTLLNAYGRSAQPEKA 419
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSP----------- 113
R+V EM++ C P+ +YNA I Y A ++A L+ EM + G+ P
Sbjct: 420 REVFNEMRKNSCKPNKVSYNALIDAYGSAGMFKEAISLLHEMEKDGIPPDVVSISTLLAA 479
Query: 114 ------------------------NATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPN 149
N YN + D + LY MM + P+
Sbjct: 480 CGRCRQTTKIDTVLEAAKFRGIELNIVAYNSGIGSYLSFGDYEKALKLYATMMASNVNPD 539
Query: 150 TQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCD---MGKLVEAE 205
+ L+ LCK + E +L+ + DMV+ L +V L+C KL EAE
Sbjct: 540 AVTYNILISGLCKLGKYAE-SLKFFEDMVDLRIP---LTKEVYSSLICSYVKQDKLAEAE 595
Query: 206 KSFLEMIEKGHKPSQVSF 223
+F+ M G P +++
Sbjct: 596 STFINMKASGCFPDVLTY 613
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 100/226 (44%), Gaps = 2/226 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV PD+V++N ++ + Q KA E M+ +I+PD + +I L VGQ A
Sbjct: 253 GVGPDLVTHNIVLSAFKNGFQYTKATGYFEMMKGANIAPDTFTLNIVIHCLVKVGQHGDA 312
Query: 65 RDVLKEMKE--YGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
D+L M+E C PD Y + I +Y + ++ + + D MV +G+ PN +YN
Sbjct: 313 VDLLNSMREKRVQCSPDVVTYTSIIHSYYVCGQVENCKAVFDMMVAEGVKPNIVSYNALL 372
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
+ ++ ++ + G P+ S L+ R + E A +++N+M +
Sbjct: 373 GAYASHGMHTEAFGIFKLLKQNGLRPDVVSYTTLLNAYGRSAQPEKAREVFNEMRKNSCK 432
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKA 228
+ + L D G EA EM + G P VS + A
Sbjct: 433 PNKVSYNALIDAYGSAGMFKEAISLLHEMEKDGIPPDVVSISTLLA 478
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 75/168 (44%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G++ +IV+YN I Y EKA K+ M +++PD ++Y +I GL +G+ ++
Sbjct: 500 GIELNIVAYNSGIGSYLSFGDYEKALKLYATMMASNVNPDAVTYNILISGLCKLGKYAES 559
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++M + Y++ I +Y +L +A M G P+ TY +
Sbjct: 560 LKFFEDMVDLRIPLTKEVYSSLICSYVKQDKLAEAESTFINMKASGCFPDVLTYTAMIQA 619
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQL 172
+ S W+L+ M G LP+ C L++ + + LQL
Sbjct: 620 YTDHGSWTSVWDLFKEMEGNAILPDAIICSSLMEALNKGNQYGRVLQL 667
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 99/248 (39%), Gaps = 2/248 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E KPD YN LI+ + + A I++ M I P +Y +++ G G
Sbjct: 179 MQEWRCKPDADIYNSLINAHARAGLWRWAINIMDDMLRAAIPPSRATYNNVVNACGAAGN 238
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA ++ K+M G PD +N + + + A+G + M ++P+ T N+
Sbjct: 239 WKKALELCKKMIRNGVGPDLVTHNIVLSAFKNGFQYTKATGYFEMMKGANIAPDTFTLNI 298
Query: 121 FFRVFYWSNDLRSSWNLYCRMM--GTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
+ +L M C P+ + ++ +VE +++ MV
Sbjct: 299 VIHCLVKVGQHGDAVDLLNSMREKRVQCSPDVVTYTSIIHSYYVCGQVENCKAVFDMMVA 358
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEA 238
+G I+ + L G EA F + + G +P VS+ + + + E
Sbjct: 359 EGVKPNIVSYNALLGAYASHGMHTEAFGIFKLLKQNGLRPDVVSYTTLLNAYGRSAQPEK 418
Query: 239 LQNLSNKM 246
+ + N+M
Sbjct: 419 AREVFNEM 426
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 87/213 (40%), Gaps = 2/213 (0%)
Query: 13 YNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMK 72
Y +I ++ + QV++A + +M++ PD Y S+I G A +++ +M
Sbjct: 156 YGMMIQLHARHNQVDQARGLFFEMQEWRCKPDADIYNSLINAHARAGLWRWAINIMDDML 215
Query: 73 EYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLR 132
P A YN + A + A L +M+ G+ P+ T+N+ F
Sbjct: 216 RAAIPPSRATYNNVVNACGAAGNWKKALELCKKMIRNGVGPDLVTHNIVLSAFKNGFQYT 275
Query: 133 SSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF--GSYILVSDV 190
+ + M G P+T + ++ + + A+ L N M EK ++
Sbjct: 276 KATGYFEMMKGANIAPDTFTLNIVIHCLVKVGQHGDAVDLLNSMREKRVQCSPDVVTYTS 335
Query: 191 LFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ G++ + F M+ +G KP+ VS+
Sbjct: 336 IIHSYYVCGQVENCKAVFDMMVAEGVKPNIVSY 368
>gi|242093812|ref|XP_002437396.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
gi|241915619|gb|EER88763.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
Length = 786
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 93/180 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR GV+PD + + +I C+D V++A E ++ +P V++Y +++ G G
Sbjct: 235 MRAAGVEPDDFTASTVIAACCRDGLVDEAVAFFEDLKARGHTPCVVTYNALLQVFGKAGN 294
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A VLKEM++ GC PDA YN Y A +A+ +D M KGL PNA TYN
Sbjct: 295 YTEALRVLKEMEQDGCQPDAVTYNELAGTYARAGFYEEAAKCLDTMTSKGLLPNAFTYNT 354
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + L+ +M +GC+PN + F++ + ++ + + L++ +M G
Sbjct: 355 VMTAYGNIGKVDEALALFDQMKKSGCVPNVNTYNFILGMLGKKSRFTVMLEMLGEMSRSG 414
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 62/103 (60%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
VKPD+VSYN +I+ +CK +++A +I+ +M + ++P V++Y +++GG + +AR
Sbjct: 660 VKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFSEAR 719
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVE 108
+V+ M ++ P Y + +YC AKR +A + E+ E
Sbjct: 720 EVINYMIQHNLKPMELTYRRVVDSYCKAKRFEEARSFLSEVSE 762
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 65/118 (55%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+++ G+ PD+++YN L+D+Y K + +A KI+ +++ + PDV+SY ++I G G
Sbjct: 620 IKQSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKSSQVKPDVVSYNTVINGFCKQGL 679
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
+A+ +L EM G P Y+ + Y + +A +++ M++ L P TY
Sbjct: 680 IKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFSEAREVINYMIQHNLKPMELTY 737
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 64/119 (53%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
++ G PD+V +N ++ +Y K+ K +I + ++ +SPD+I+Y S++ +
Sbjct: 585 VKARGYNPDLVIFNSMLSMYAKNGMYSKVTEIFDSIKQSGLSPDLITYNSLMDMYAKCSE 644
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+A +L ++K PD +YN I +C +++A ++ EM+ G++P TY+
Sbjct: 645 SWEAEKILNQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYH 703
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 102/228 (44%), Gaps = 10/228 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G P++ +YN ++ + K + +++ +M +P+ +++ +++ G G
Sbjct: 375 MKKSGCVPNVNTYNFILGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGM 434
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D VL+ MK G YN I Y +A + +EM G +P TTYN
Sbjct: 435 EDYVTRVLEGMKSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFAPCLTTYNA 494
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKV----EIALQLWNDM 176
V D ++ ++ +M G PN QS L++ + + I +++
Sbjct: 495 LLNVLSRQGDWSTAQSIVSKMRTKGFKPNDQSYSLLLQCYAKGGNIAGIDAIEKEVYGGT 554
Query: 177 VEKGFGSYILVSD-VLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
V F S++++ V+ + C +L EK+F E+ +G+ P V F
Sbjct: 555 V---FPSWVILRTLVIANFKCR--RLGGIEKAFQEVKARGYNPDLVIF 597
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/227 (20%), Positives = 100/227 (44%), Gaps = 1/227 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP-DK 63
G + D+ +Y ++ + + E+A ++ ++R + ++P +++Y ++ G +G+ +
Sbjct: 168 GSRLDVRAYTTVLHALSRAGRYERAVELFAELRRQGVAPTLVTYNVVLDVYGRMGRSWPR 227
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
+L EM+ G PD + I C + +A +++ +G +P TYN +
Sbjct: 228 IVALLDEMRAAGVEPDDFTASTVIAACCRDGLVDEAVAFFEDLKARGHTPCVVTYNALLQ 287
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
VF + + + + M GC P+ + L R E A + + M KG
Sbjct: 288 VFGKAGNYTEALRVLKEMEQDGCQPDAVTYNELAGTYARAGFYEEAAKCLDTMTSKGLLP 347
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALM 230
+ + ++GK+ EA F +M + G P+ ++ I ++
Sbjct: 348 NAFTYNTVMTAYGNIGKVDEALALFDQMKKSGCVPNVNTYNFILGML 394
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 100/229 (43%), Gaps = 6/229 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPD-VISYTSIIGGLGL-- 57
MR G KP+ SY+ L+ Y K + I +++ + P VI T +I
Sbjct: 515 MRTKGFKPNDQSYSLLLQCYAKGGNIAGIDAIEKEVYGGTVFPSWVILRTLVIANFKCRR 574
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
+G +KA +E+K G PD +N+ + Y + + D + + GLSP+ T
Sbjct: 575 LGGIEKA---FQEVKARGYNPDLVIFNSMLSMYAKNGMYSKVTEIFDSIKQSGLSPDLIT 631
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
YN ++ ++ + + ++ + P+ S ++ +Q ++ A ++ ++M+
Sbjct: 632 YNSLMDMYAKCSESWEAEKILNQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMI 691
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G ++ L + EA + MI+ KP ++++RR+
Sbjct: 692 ADGMAPCVVTYHTLVGGYASLEMFSEAREVINYMIQHNLKPMELTYRRV 740
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/209 (19%), Positives = 84/209 (40%), Gaps = 1/209 (0%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
V P V L+ K R++ K ++++ +PD++ + S++ G K
Sbjct: 555 VFPSWVILRTLVIANFKCRRLGGIEKAFQEVKARGYNPDLVIFNSMLSMYAKNGMYSKVT 614
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
++ +K+ G PD YN+ + Y +A +++++ + P+ +YN F
Sbjct: 615 EIFDSIKQSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKSSQVKPDVVSYNTVINGF 674
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
++ + + M+ G P + LV E A ++ N M++
Sbjct: 675 CKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFSEAREVINYMIQHNLKPME 734
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEK 214
L + D C + EA +SFL + +
Sbjct: 735 LTYRRVVDSYCKAKRFEEA-RSFLSEVSE 762
>gi|449499490|ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 112/235 (47%), Gaps = 16/235 (6%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMR-DEDI---------------SPDVISY 48
G P++++Y LID YCK +EKA +I +MR D DI P+V++Y
Sbjct: 589 GCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTY 648
Query: 49 TSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVE 108
+++ GL + ARD+L+ M GC P+ Y+A I +C A +L +A + +MVE
Sbjct: 649 GALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVE 708
Query: 109 KGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEI 168
+G +PN TY+ + L + +M+ C PN ++ + K +
Sbjct: 709 RGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDE 768
Query: 169 ALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
A +L M EKG ++ + D GK+ + + F EM KG P+ V++
Sbjct: 769 AYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTY 823
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 108/240 (45%), Gaps = 20/240 (8%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PD +Y+ +I C +VE A+ + ++M+ + PDV +YT +I G +A
Sbjct: 484 GFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQA 543
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ L EM GC P Y I Y AK++ A+ L + M+ KG PN TY
Sbjct: 544 HNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDG 603
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK------------------LCKRQEKV 166
+ S ++ + +Y RM G +P+ F +K LCK KV
Sbjct: 604 YCKSGNIEKACQIYARMRGDADIPDVDM-YFKIKNNVAEKPNVVTYGALVDGLCKAH-KV 661
Query: 167 EIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ A L M G +V D L D C KL EA++ F +M+E+G+ P+ ++ +
Sbjct: 662 KDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSL 721
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 104/212 (49%), Gaps = 2/212 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G P++ +Y+ LID KD++++ K++ KM + +P+++ YT +I GL V +
Sbjct: 706 MVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAK 765
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A ++ M+E GC P+ Y A I + A ++ L EM KG +PN TY +
Sbjct: 766 TDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTV 825
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L ++ L M T + S +++ KR+ ++L L ++ + G
Sbjct: 826 LINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKRE--FILSLGLLEEVEKNG 883
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMI 212
IL+ VL D G+L A + E+I
Sbjct: 884 SAPTILLYKVLIDNFVKAGRLEVALELHKEVI 915
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 114/274 (41%), Gaps = 51/274 (18%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ GV PD+ +Y LID + K +++A+ +++M + P V++YT++I +
Sbjct: 515 MKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKK 574
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYC----------IAKRLR------------- 97
A ++ + M GC+P+ Y A I YC I R+R
Sbjct: 575 VSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFK 634
Query: 98 ----------------------------DASGLMDEMVEKGLSPNATTYNLFFRVFYWSN 129
DA L++ M G PN Y+ F +
Sbjct: 635 IKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAA 694
Query: 130 DLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSD 189
L + ++ +M+ G PN + L+ + +++++ L++ + M+E I++
Sbjct: 695 KLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYT 754
Query: 190 VLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ D L + K EA K L M EKG KP+ V++
Sbjct: 755 EMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTY 788
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 113/263 (42%), Gaps = 12/263 (4%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G +P+ + Y+ LID +CK ++++A ++ KM + +P+V +Y+S+I L + D
Sbjct: 675 GCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLV 734
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
VL +M E C P+ Y I + +A LM M EKG PN TY
Sbjct: 735 LKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDG 794
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE----KG 180
F + + L+ M GC PN + L+ C ++ A L +M + K
Sbjct: 795 FGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKH 854
Query: 181 FGSYI-LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
SY ++ + + +G L E EK+ G P+ + ++ + A + E
Sbjct: 855 VSSYCKVIEGYKREFILSLGLLEEVEKN-------GSAPTILLYKVLIDNFVKAGRLEVA 907
Query: 240 QNLSNKMALFGPSMIPKREEYLA 262
L ++ SM K+ Y +
Sbjct: 908 LELHKEVISASMSMTAKKNLYTS 930
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 107/266 (40%), Gaps = 11/266 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E+G+ D + CK + +A ++EK ED P+ I Y +I GL
Sbjct: 267 MSELGLSMDEFTLGFFAQALCKVGKWREALSLIEK---EDFVPNTILYNKMISGLCEASF 323
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A D L M+ C P+ Y + K+L ++ M+ +G P+ T +N
Sbjct: 324 FEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNS 383
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQE-----KVEIALQLWN 174
+ S+D ++ L +M C P L+ +C E E+A + +N
Sbjct: 384 LVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYN 443
Query: 175 DMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELAN 234
+M+ G + LC GK +A K EM+ G P ++ + + A+
Sbjct: 444 EMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNAS 503
Query: 235 KQEALQNLSNKMALFGPSMIPKREEY 260
+ E L +M G ++P Y
Sbjct: 504 RVENAFFLFKEMK--GTGVVPDVYTY 527
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 95/225 (42%), Gaps = 6/225 (2%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGL---GLVGQP 61
G P +N L+ YCK AYK+++KM + P + Y +IG + G + P
Sbjct: 373 GCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGP 432
Query: 62 ---DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
+ A EM G + + R C + A ++ EM+ G P+ +TY
Sbjct: 433 VTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTY 492
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
+ ++ + +++ L+ M GTG +P+ + L+ + ++ A ++MV
Sbjct: 493 SEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVR 552
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G ++ L K+ A + F MI KG P+ +++
Sbjct: 553 DGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITY 597
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 80/179 (44%), Gaps = 4/179 (2%)
Query: 14 NCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKE 73
N LI C++ A + + +++D P ++Y +++ + D A+ V +EM E
Sbjct: 210 NVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSE 269
Query: 74 YGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRS 133
G D + C + R+A L++ ++ PN YN ++
Sbjct: 270 LGLSMDEFTLGFFAQALCKVGKWREALSLIE---KEDFVPNTILYNKMISGLCEASFFEE 326
Query: 134 SWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG-FGSYILVSDVL 191
+ + RM T C+PN Q+ L+ C ++++ ++ + M+ +G + SY + + ++
Sbjct: 327 AMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLV 385
>gi|414882130|tpg|DAA59261.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
Length = 1603
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 108/226 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR MG+ PD+++YN L++ YCK +++A + +R ++P V++Y +I G +G
Sbjct: 1251 MRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGD 1310
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++AR + +EM E GC P+ Y ++ + L A DEM+ KGL P+ YN
Sbjct: 1311 LEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNT 1370
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
D+ ++ L +M G +T + L+ + ++ A +L MV G
Sbjct: 1371 RICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNG 1430
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ L C+ G L EA K F MI G PS V+F I
Sbjct: 1431 LQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVI 1476
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 121/245 (49%), Gaps = 5/245 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+R G+ P +++YN LID YC+ +E+A + E+M ++ P+V +YT ++ G V
Sbjct: 1286 LRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRS 1345
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
AR+ EM G PD AYN I I + A L + ++ +G+S + TYN+
Sbjct: 1346 LAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFELREVLMLEGISSDTVTYNI 1405
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPN--TQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
+ +L+ + L +M+ G P+ T +C+ C+R E A +++N+M+
Sbjct: 1406 LIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAH-CERGLLRE-ARKIFNNMIS 1463
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQE 237
G + V+ C G L A F +M+E+G +P+++++ I AL + Q
Sbjct: 1464 DGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQL 1523
Query: 238 ALQNL 242
A +
Sbjct: 1524 ASHHF 1528
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 108/226 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G++PD +YN I + +A+++ E + E IS D ++Y +I GL G
Sbjct: 1356 MLSKGLQPDCFAYNTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGN 1415
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A+++ +M G PD Y I +C LR+A + + M+ GL P+A T+ +
Sbjct: 1416 LKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTV 1475
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ +L S++ + +M+ G PN + L+ R + ++A +++M+E+G
Sbjct: 1476 IIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERG 1535
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ +L D C +G +A + + EM + G P ++ + +
Sbjct: 1536 LVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKAL 1581
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 106/247 (42%), Gaps = 35/247 (14%)
Query: 12 SYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEM 71
+YN LI V+K Y + +M +E I P V++Y ++I GL G + A+ EM
Sbjct: 1192 TYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEM 1251
Query: 72 KEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDL 131
+ G PD YN+ + YC A L++A L ++ GL+P TYN+ + DL
Sbjct: 1252 RAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDL 1311
Query: 132 RSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF---------- 181
+ L M GCLPN + L+K + +A + +++M+ KG
Sbjct: 1312 EEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTR 1371
Query: 182 -------------------------GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGH 216
S + ++L LC G L +A++ ++M+ G
Sbjct: 1372 ICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGL 1431
Query: 217 KPSQVSF 223
+P +++
Sbjct: 1432 QPDCITY 1438
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 103/259 (39%), Gaps = 36/259 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV PD+ N ++ V + + + E+M + I P +++Y +++ G+
Sbjct: 1075 MASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDSFLKEGR 1134
Query: 61 PDKARDVLKEM--KEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMD-------------- 104
DK +LKEM + GC P+ YN I L +A+ L++
Sbjct: 1135 KDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKASSFTYN 1194
Query: 105 --------------------EMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGT 144
EM +G+ P TYN S + ++ + M
Sbjct: 1195 PLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAM 1254
Query: 145 GCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEA 204
G LP+ + L+ + ++ AL L+ D+ G +L ++L D C +G L EA
Sbjct: 1255 GLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEA 1314
Query: 205 EKSFLEMIEKGHKPSQVSF 223
EM E+G P+ ++
Sbjct: 1315 RILKEEMGEQGCLPNVCTY 1333
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 103/240 (42%), Gaps = 2/240 (0%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
R G P+ V+YN +I + +E+A ++VE MR + +Y +I GL G
Sbjct: 1148 RGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKASS-FTYNPLITGLLARGCV 1206
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
K D+ EM+ G P YNA I + + A EM GL P+ TYN
Sbjct: 1207 KKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSL 1266
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
+ + +L+ + L+ + G P + L+ R +E A L +M E+G
Sbjct: 1267 LNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGC 1326
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEALQ 240
+ +L ++ L A + F EM+ KG +P ++ RI A + L + A +
Sbjct: 1327 LPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFE 1386
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 52/121 (42%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ P V++ +I YC+ + AY KM +E + P+ I+Y +I L +G+ A
Sbjct: 1465 GLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLA 1524
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
EM E G + Y I C DA EM + G+ P+ T+ +
Sbjct: 1525 SHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALLKG 1584
Query: 125 F 125
F
Sbjct: 1585 F 1585
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 66/159 (41%), Gaps = 3/159 (1%)
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
+EM +G PD N +R A R D + +EM+E G+ P+ TYN F
Sbjct: 1071 AFREMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDSFL 1130
Query: 127 WSNDLRSSWNLYCRM--MGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
L M G+GCLPN + ++ R+ +E A +L M S
Sbjct: 1131 KEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKASS 1190
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ ++ LL G + + LEM +G P+ V++
Sbjct: 1191 FTYNPLITGLLA-RGCVKKVYDLQLEMENEGIMPTVVTY 1228
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E GV+P+ ++YN LI C+ + + A +M + + + +YT +I G VG
Sbjct: 1496 MLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGN 1555
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNY 90
+ A EM + G +PD + A ++ +
Sbjct: 1556 WEDAMRFYFEMHQNGIHPDYLTHKALLKGF 1585
>gi|357167837|ref|XP_003581356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Brachypodium distachyon]
Length = 524
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 108/223 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+ PD +YN LI+ YCK+ + +KA K+ E M + I V++YTS+I L + G
Sbjct: 280 MGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGM 339
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ + + G PD YNA I ++C + A +M EM +K ++P+ TYN
Sbjct: 340 VQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNT 399
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
R L + L M G P+ S L+ + ++ A+++ ++M+ KG
Sbjct: 400 LMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKG 459
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
F +L + + LC G+ +AE EM+ G P ++
Sbjct: 460 FNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNGITPDDSTY 502
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 107/220 (48%), Gaps = 3/220 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDE-DISPDVISYTSIIGGLGLVG 59
+R+M P+ V+YN +I +C +V+ +I+ +MR+ I+PD +Y ++I G VG
Sbjct: 139 LRQM-PSPNAVTYNTVIAGFCARGRVQAGIEIMREMRERGGIAPDKYTYATVISGWCKVG 197
Query: 60 QPDKARDVLKEMKEYG-CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
+ + A V EM G P+A YNA I YC L A EMV++G+S TY
Sbjct: 198 KVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATY 257
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
NLF + + L M G P+ + L+ ++ K + A++++ MV
Sbjct: 258 NLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVG 317
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
KG + ++ L L G + E ++ F + + +G +P
Sbjct: 318 KGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRP 357
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 109/231 (47%), Gaps = 5/231 (2%)
Query: 1 MREM----GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDED-ISPDVISYTSIIGGL 55
MREM G+ PD +Y +I +CK +VE A K+ ++M E + P+ + Y ++IGG
Sbjct: 170 MREMRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGY 229
Query: 56 GLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNA 115
G + A EM + G A YN + + R +A L++EM EKGL+P+A
Sbjct: 230 CDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDA 289
Query: 116 TTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWND 175
TYN+ + + + ++ M+G G + L+ + V+ +L+ND
Sbjct: 290 FTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFND 349
Query: 176 MVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
V +G + + + L + C G + A + EM +K P V++ +
Sbjct: 350 AVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTL 400
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 97/215 (45%), Gaps = 6/215 (2%)
Query: 11 VSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKE 70
++N ++ C + +A +++ +M SP+ ++Y ++I G G+ ++++E
Sbjct: 117 TTFNIMLRHLCTAGKPVRALELLRQMP----SPNAVTYNTVIAGFCARGRVQAGIEIMRE 172
Query: 71 MKEY-GCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKG-LSPNATTYNLFFRVFYWS 128
M+E G PD Y I +C ++ DA+ + DEM+ +G + PNA YN +
Sbjct: 173 MRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQ 232
Query: 129 NDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVS 188
+L + M+ G + V + + A L +M EKG
Sbjct: 233 GNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTY 292
Query: 189 DVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++L + C GK +A K F M+ KG + + V++
Sbjct: 293 NILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTY 327
>gi|42408237|dbj|BAD09394.1| putative PPR protein [Oryza sativa Japonica Group]
gi|215678545|dbj|BAG92200.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 624
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 119/246 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G PD+V+Y+ +I K + ++KA ++ +M + PD I YTS++ G G+
Sbjct: 233 MLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGK 292
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
P +A + K+M +G PD Y A + C + +A + D +V++G P++TTY
Sbjct: 293 PKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGT 352
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L +L MM G ++ + KV+ AL ++++M ++G
Sbjct: 353 LLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQG 412
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
I+ + D+LC G++ +A F + +G P+ V F + + +K + ++
Sbjct: 413 LNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVE 472
Query: 241 NLSNKM 246
L+ +M
Sbjct: 473 ELAFEM 478
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 106/213 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G+ PDIV+Y ++D+ C +V+ A ++ E ++P+++ +T++I GL +
Sbjct: 408 MRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDK 467
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DK ++ EM + G D +NA + N C R+ +A L D MV G+ PN TYN
Sbjct: 468 WDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNT 527
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + L M+ G P+ + ++ + ++E L L +M KG
Sbjct: 528 LIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKG 587
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIE 213
I+ ++L L G+ V A++ +L MI+
Sbjct: 588 VNPGIVTYEMLLQGLFQAGRTVAAKELYLRMIK 620
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 101/215 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV PD + Y L+ YC + ++A I +KM + PDV++YT+++ L G+
Sbjct: 268 MVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGK 327
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR + + + G PD+ Y + Y L + L+D M++KG+ +N+
Sbjct: 328 STEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNM 387
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ N + + ++ M G P+ + ++ + +V+ AL +N + +G
Sbjct: 388 IMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEG 447
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
I+V L LC K + E+ EMI++G
Sbjct: 448 LAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRG 482
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 100/222 (45%), Gaps = 3/222 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIV-EKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
G++ + ++ L+ C R+ A IV +M + PD+ SYT ++ GL +
Sbjct: 129 GLRMSPILFSPLLKGLCDRRRTSDAMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQ 188
Query: 64 ARDVLKEMKEYG--CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
A D+L M ++ C D AY I +L A L D M+++G SP+ TY+
Sbjct: 189 ALDLLHIMADHKGRCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSI 248
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
+ + + ++ RM+ G +P+ LV K + A+ ++ M G
Sbjct: 249 ISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGV 308
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ L D LC GK EA K F ++++GHKP ++
Sbjct: 309 EPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTY 350
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 100/258 (38%), Gaps = 37/258 (14%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVG----- 59
GV+PD+V+Y L+D CK+ + +A KI + + PD +Y +++ G G
Sbjct: 307 GVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEM 366
Query: 60 ------------------------------QPDKARDVLKEMKEYGCYPDAAAYNAAIRN 89
+ D+A V M++ G PD Y +
Sbjct: 367 HDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDI 426
Query: 90 YCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG-CLP 148
C A R+ DA + + +GL+PN + + L M+ G CL
Sbjct: 427 LCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLD 486
Query: 149 NTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSF 208
+ LCK+ +E A L++ MV G + L D C GK+ EA K
Sbjct: 487 TIFFNAIMGNLCKKGRVIE-AKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLL 545
Query: 209 LEMIEKGHKPSQVSFRRI 226
M+ G KPS V++ I
Sbjct: 546 GVMVFNGVKPSDVTYNTI 563
>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g22470, mitochondrial-like [Glycine max]
Length = 468
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 119/241 (49%), Gaps = 6/241 (2%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+P++V Y+ +ID CKD+ V +AY + +M +I P+VI+Y ++I L GQ A
Sbjct: 146 TRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAF 205
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+L EM PD ++ I C K ++A + MV+ G++PN +YN+
Sbjct: 206 SLLHEMILKNINPDVYTFSILIDALC--KEGKNAKQIFHAMVQMGVNPNVYSYNIMINGL 263
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ + NL M+ +P+T + L+ + ++ AL L N+M +G + +
Sbjct: 264 CKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADV 323
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALME---LANKQEALQN 241
+ L D LC L +A F++M E+G +P+ ++ I L + L N QE Q+
Sbjct: 324 VTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQH 383
Query: 242 L 242
L
Sbjct: 384 L 384
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 107/215 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +MGV P++ SYN +I+ CK ++V++A ++ +M +++ PD ++Y S+I GL G+
Sbjct: 244 MVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGR 303
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +++ EM G D Y + + C + L A+ L +M E+G+ P TY
Sbjct: 304 ITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTA 363
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
L+++ L+ ++ GC + + ++ ++ + AL + + M + G
Sbjct: 364 LIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNG 423
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
+ +++ L + + +AEK EMI KG
Sbjct: 424 CIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKG 458
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 116/240 (48%), Gaps = 10/240 (4%)
Query: 11 VSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKE 70
VSY L++ CK + A K++ + D P+V+ Y++II GL ++A D+ E
Sbjct: 116 VSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSE 175
Query: 71 MKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSND 130
M +P+ YN I +C+A +L A L+ EM+ K ++P+ T+++ +
Sbjct: 176 MDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDAL--CKE 233
Query: 131 LRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYILVSD 189
+++ ++ M+ G PN S ++ LCK + +V+ A+ L +M+ K + +
Sbjct: 234 GKNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCK-RVDEAMNLLREMLHKNMVPDTVTYN 292
Query: 190 VLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALF 249
L D LC G++ A EM +G V++ +L++ K QNL ALF
Sbjct: 293 SLIDGLCKSGRITSALNLMNEMHHRGQPADVVTY---TSLLDALCKN---QNLDKATALF 346
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 103/221 (46%), Gaps = 2/221 (0%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ PD+ +++ LID CK+ + A +I M ++P+V SY +I GL + D+A
Sbjct: 216 INPDVYTFSILIDALCKEGK--NAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAM 273
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
++L+EM PD YN+ I C + R+ A LM+EM +G + TY
Sbjct: 274 NLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDAL 333
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ +L + L+ +M G P + L+ + +++ A +L+ ++ KG +
Sbjct: 334 CKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDV 393
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
V+ LC G EA +M + G P+ V+F I
Sbjct: 394 WTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEII 434
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 114/245 (46%), Gaps = 4/245 (1%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
++G P+ +++ L+ C +V+K +K+ + + +SY +++ GL G+
Sbjct: 73 KLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETR 132
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
A +L+ +++ P+ Y+A I C K + +A L EM + + PN TYN
Sbjct: 133 CAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLI 192
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEKGF 181
F + L +++L M+ P+ + L+ LCK + A Q+++ MV+ G
Sbjct: 193 CAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGKN---AKQIFHAMVQMGV 249
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQN 241
+ +++ + LC ++ EA EM+ K P V++ + + + + + N
Sbjct: 250 NPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALN 309
Query: 242 LSNKM 246
L N+M
Sbjct: 310 LMNEM 314
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 71/147 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G D+V+Y L+D CK++ ++KA + KM++ I P + +YT++I GL G+
Sbjct: 314 MHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGR 373
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A+++ + + GC D Y I C +A + +M + G PNA T+ +
Sbjct: 374 LKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEI 433
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCL 147
R + ++ + L M+ G L
Sbjct: 434 IIRSLFEKDENDKAEKLLHEMIAKGLL 460
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 41/219 (18%), Positives = 83/219 (37%), Gaps = 35/219 (15%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G++ ++V+ + LI+ +C Q+ ++ ++ K+ P+ I++T+++ GL L G+ K
Sbjct: 40 GIEQNLVTLSILINCFCHLGQMAFSFSLLGKILKLGYXPNTITWTTLMKGLCLKGEVKKL 99
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++ + +Y + C R A L+ + ++ PN Y+
Sbjct: 100 LHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIID- 158
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
LCK + V A L+++M +
Sbjct: 159 ---------------------------------GLCK-DKLVNEAYDLYSEMDAREIFPN 184
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + L C G+L+ A EMI K P +F
Sbjct: 185 VITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTF 223
>gi|224111364|ref|XP_002315827.1| predicted protein [Populus trichocarpa]
gi|222864867|gb|EEF01998.1| predicted protein [Populus trichocarpa]
Length = 472
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 117/257 (45%), Gaps = 4/257 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDI---SPDVISYTSIIGGLGL 57
M ++G PD +Y ID +C+ V +A ++ E MR + SP +Y +IG L
Sbjct: 198 MIQLGHTPDSFTYITAIDAFCRAGMVNEAAELFEFMRTKGSTMSSPTAKTYAIMIGALVR 257
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
+ D+ +L++M GC PD + + I C A ++ +A + EM KG P+ T
Sbjct: 258 NNRMDECFKLLEDMINSGCLPDVSTFKELIEGMCSAGKIDEAYRFLQEMGNKGYPPDIVT 317
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
YN F +V + + + LY RM+ GC P+ Q+ L+ + + A + W +M
Sbjct: 318 YNCFLKVLCENKNSEEALRLYERMIEAGCFPSVQTHNMLISMFFEMGDPDGAFETWYEMD 377
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQE 237
++G + V+ D L K+ +A +++ KG K F + +
Sbjct: 378 KRGCAQDVDTYIVMIDGLFGCNKVEDACFLIEDIVNKGMKLPYQKFDSFLMQLSVIGNIR 437
Query: 238 ALQNLSNKMALF-GPSM 253
A+ LS M F PSM
Sbjct: 438 AIHRLSEHMRTFHNPSM 454
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 113/239 (47%), Gaps = 5/239 (2%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+P+I ++N L+D CK E A + ++++++ + PD +Y + G V P +
Sbjct: 134 TQPEINAFNLLLDALCKCCLAEDAEGLFKRVKNK-VKPDANTYNVMFFGWCRVRNPTRGM 192
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKG---LSPNATTYNLFF 122
VL+EM + G PD+ Y AI +C A + +A+ L + M KG SP A TY +
Sbjct: 193 KVLEEMIQLGHTPDSFTYITAIDAFCRAGMVNEAAELFEFMRTKGSTMSSPTAKTYAIMI 252
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
+N + + L M+ +GCLP+ + L++ K++ A + +M KG+
Sbjct: 253 GALVRNNRMDECFKLLEDMINSGCLPDVSTFKELIEGMCSAGKIDEAYRFLQEMGNKGYP 312
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS-QVSFRRIKALMELANKQEALQ 240
I+ + +LC+ EA + + MIE G PS Q I E+ + A +
Sbjct: 313 PDIVTYNCFLKVLCENKNSEEALRLYERMIEAGCFPSVQTHNMLISMFFEMGDPDGAFE 371
>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
Length = 969
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 114/243 (46%), Gaps = 18/243 (7%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD +Y+ +I C+ +VEKA+ + ++M+ + PDV +YT +I VG
Sbjct: 446 MMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGL 505
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++AR EM+ GC P Y A + Y K++ AS + MV+ G +PN TY+
Sbjct: 506 IEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSA 565
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGT----------------GCLPNTQSCMFLVK-LCKRQ 163
+ + + + +Y +M+GT PN + L+ LCK
Sbjct: 566 LVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAH 625
Query: 164 EKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ V+ A +L + M G ++ D L D C +GKL A++ F M + G+ P+ ++
Sbjct: 626 KVVD-AQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTY 684
Query: 224 RRI 226
+
Sbjct: 685 TSL 687
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 95/206 (46%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ P++V+Y LID CK +V A ++++ M P+ I Y ++I G VG+ D A+
Sbjct: 607 IAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQ 666
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+V M + G P Y + I +RL A ++ +M+E +PN TY
Sbjct: 667 EVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGL 726
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ + + L M GC PN + L+ + KV+++LQL+ M+ +G
Sbjct: 727 CRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNY 786
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEM 211
+ VL + C G L EA EM
Sbjct: 787 VTYRVLINHCCAAGLLDEAHSLLSEM 812
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 112/240 (46%), Gaps = 16/240 (6%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKM----------------RDEDISPD 44
M + G P+ ++Y+ L+D CK + +KA ++ KM + I+P+
Sbjct: 551 MVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPN 610
Query: 45 VISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMD 104
V++Y ++I GL + A+++L M GC P+ Y+A I +C +L +A +
Sbjct: 611 VVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFF 670
Query: 105 EMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQE 164
M + G P TY + L + + +M+ + C PN + ++ R
Sbjct: 671 RMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIG 730
Query: 165 KVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
+ + AL+L + M ++G ++ L D L GK+ + + F +MI +G P+ V++R
Sbjct: 731 ECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYR 790
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 97/220 (44%), Gaps = 18/220 (8%)
Query: 21 CKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDA 80
C + +KA++I++ M + PD +Y+ +I L + +KA + +EMK G PD
Sbjct: 431 CGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDV 490
Query: 81 AAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCR 140
Y I ++C + A DEM G SP+ TY + + + + +++ R
Sbjct: 491 YTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHR 550
Query: 141 MMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMV----------------EKGFGS 183
M+ GC PNT + LV LCK E + A +++ M+
Sbjct: 551 MVDAGCAPNTITYSALVDGLCKAGES-QKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAP 609
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ L D LC K+V+A++ M G +P+ + +
Sbjct: 610 NVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIY 649
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 86/185 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G +P+ + Y+ LID +CK +++ A ++ +M P V +YTS+I + +
Sbjct: 637 MSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRR 696
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A VL +M E C P+ Y A I C + A L+ M ++G +PN TY
Sbjct: 697 LDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTS 756
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
S + S L+ +M+ GC PN + L+ C ++ A L ++M +
Sbjct: 757 LIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTY 816
Query: 181 FGSYI 185
+ Y+
Sbjct: 817 WPKYV 821
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 110/266 (41%), Gaps = 11/266 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E+G D + C CK+ + A ++E+ ED D + T +I GL
Sbjct: 233 MSELGFCTDKFTVGCFAQALCKEGRWSDALVMIER---EDFKLDTVLCTQMISGLMEASL 289
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A L M+ C P+ Y + + K+L ++ M+ +G +PN + +N
Sbjct: 290 FDEAISFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNS 349
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPN-TQSCMFLVKLCKRQE-KVEIALQLWNDMVE 178
+ + D ++ L RM G GC P +F+ +C +E L L + E
Sbjct: 350 LVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSPDLLALAEKVYE 409
Query: 179 KGFGSYILVSDV----LFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELAN 234
+ S +++ V LC MGK +A + M+ KG P ++ ++ + A
Sbjct: 410 EMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAM 469
Query: 235 KQEALQNLSNKMALFGPSMIPKREEY 260
K E L +M G +IP Y
Sbjct: 470 KVEKAFLLFQEMKSVG--VIPDVYTY 493
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 92/229 (40%), Gaps = 6/229 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR P++V+Y L+ + K +Q+ +I+ M +E +P+ + S++
Sbjct: 300 MRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYCNARD 359
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRD------ASGLMDEMVEKGLSPN 114
A +L M GC P YN I + C + L A + +EM+ N
Sbjct: 360 YPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSPDLLALAEKVYEEMLASSCVLN 419
Query: 115 ATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWN 174
F R ++ + MM G +P+T + ++ KVE A L+
Sbjct: 420 KVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQ 479
Query: 175 DMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+M G + +L D C +G + +A F EM G PS V++
Sbjct: 480 EMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTY 528
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 88/216 (40%), Gaps = 36/216 (16%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G P++V+Y LID K +V+ + ++ +M + +P+ ++Y +I G
Sbjct: 742 MEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGL 801
Query: 61 PDKARDVLKEMKE---------------------------------YGCYPDAAAYNAAI 87
D+A +L EMK+ +G A Y I
Sbjct: 802 LDEAHSLLSEMKQTYWPKYVQGYCSVVQGFSKKFIASLGLLEELESHGMVSIAPVYGLLI 861
Query: 88 RNYCIAKRLRDASGLMDEMVEKGLSPNAT---TYNLFFRVFYWSNDLRSSWNLYCRMMGT 144
++ A RL A L EM+E S N T TY + ++ L ++ LY +
Sbjct: 862 DSFSKAGRLEKALELHKEMMEVSSSLNITSKDTYTSLIQALCLASQLEKAFELYSEITRK 921
Query: 145 GCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
G +P + + L+K + K ALQL M ++G
Sbjct: 922 GVVPELSAFICLIKGLIKVNKWNEALQLCYSMCDEG 957
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/247 (20%), Positives = 97/247 (39%), Gaps = 7/247 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGL--- 57
M G P+ +N L+ YC R AYK++ +M P + Y IG +
Sbjct: 335 MMNEGCNPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEE 394
Query: 58 VGQPDK---ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPN 114
+ PD A V +EM C + R C + A ++ M+ KG P+
Sbjct: 395 LPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPD 454
Query: 115 ATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWN 174
+TY+ + + ++ L+ M G +P+ + L+ + +E A ++
Sbjct: 455 TSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFD 514
Query: 175 DMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELA 233
+M G ++ L ++ +A F M++ G P+ +++ + L +
Sbjct: 515 EMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAG 574
Query: 234 NKQEALQ 240
Q+A +
Sbjct: 575 ESQKACE 581
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 54/103 (52%), Gaps = 3/103 (2%)
Query: 13 YNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVIS---YTSIIGGLGLVGQPDKARDVLK 69
Y LID + K ++EKA ++ ++M + S ++ S YTS+I L L Q +KA ++
Sbjct: 857 YGLLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKDTYTSLIQALCLASQLEKAFELYS 916
Query: 70 EMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLS 112
E+ G P+ +A+ I+ + +A L M ++G++
Sbjct: 917 EITRKGVVPELSAFICLIKGLIKVNKWNEALQLCYSMCDEGVN 959
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 81/237 (34%), Gaps = 38/237 (16%)
Query: 14 NCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKE 73
N ++ C+ KA + + +++D P +Y +++ L GQ D V KEM E
Sbjct: 176 NVIVRKCCRHGAWAKALEELGRLKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSE 235
Query: 74 YGCYPDAAAYNAAIRNYCIAKRLRDA--------------------SGLMD-EMVEKGLS 112
G D + C R DA SGLM+ + ++ +S
Sbjct: 236 LGFCTDKFTVGCFAQALCKEGRWSDALVMIEREDFKLDTVLCTQMISGLMEASLFDEAIS 295
Query: 113 -----------PNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCK 161
PN TY F L + MM GC PN LV
Sbjct: 296 FLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYC 355
Query: 162 RQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVE------AEKSFLEMI 212
A +L N M G +V ++ +C +L AEK + EM+
Sbjct: 356 NARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSPDLLALAEKVYEEML 412
>gi|222639781|gb|EEE67913.1| hypothetical protein OsJ_25766 [Oryza sativa Japonica Group]
Length = 625
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 119/246 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G PD+V+Y+ +I K + ++KA ++ +M + PD I YTS++ G G+
Sbjct: 234 MLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGK 293
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
P +A + K+M +G PD Y A + C + +A + D +V++G P++TTY
Sbjct: 294 PKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGT 353
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L +L MM G ++ + KV+ AL ++++M ++G
Sbjct: 354 LLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQG 413
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
I+ + D+LC G++ +A F + +G P+ V F + + +K + ++
Sbjct: 414 LNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVE 473
Query: 241 NLSNKM 246
L+ +M
Sbjct: 474 ELAFEM 479
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 106/213 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G+ PDIV+Y ++D+ C +V+ A ++ E ++P+++ +T++I GL +
Sbjct: 409 MRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDK 468
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DK ++ EM + G D +NA + N C R+ +A L D MV G+ PN TYN
Sbjct: 469 WDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNT 528
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + L M+ G P+ + ++ + ++E L L +M KG
Sbjct: 529 LIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKG 588
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIE 213
I+ ++L L G+ V A++ +L MI+
Sbjct: 589 VNPGIVTYEMLLQGLFQAGRTVAAKELYLRMIK 621
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 101/215 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV PD + Y L+ YC + ++A I +KM + PDV++YT+++ L G+
Sbjct: 269 MVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGK 328
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR + + + G PD+ Y + Y L + L+D M++KG+ +N+
Sbjct: 329 STEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNM 388
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ N + + ++ M G P+ + ++ + +V+ AL +N + +G
Sbjct: 389 IMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEG 448
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
I+V L LC K + E+ EMI++G
Sbjct: 449 LAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRG 483
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 88/194 (45%), Gaps = 2/194 (1%)
Query: 32 IVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYG--CYPDAAAYNAAIRN 89
++ +M + PD+ SYT ++ GL +A D+L M ++ C D AY I
Sbjct: 158 VLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVING 217
Query: 90 YCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPN 149
+L A L D M+++G SP+ TY+ + + + ++ RM+ G +P+
Sbjct: 218 LLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPD 277
Query: 150 TQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFL 209
LV K + A+ ++ M G ++ L D LC GK EA K F
Sbjct: 278 CIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFD 337
Query: 210 EMIEKGHKPSQVSF 223
++++GHKP ++
Sbjct: 338 SLVKRGHKPDSTTY 351
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 100/258 (38%), Gaps = 37/258 (14%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVG----- 59
GV+PD+V+Y L+D CK+ + +A KI + + PD +Y +++ G G
Sbjct: 308 GVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEM 367
Query: 60 ------------------------------QPDKARDVLKEMKEYGCYPDAAAYNAAIRN 89
+ D+A V M++ G PD Y +
Sbjct: 368 HDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDI 427
Query: 90 YCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG-CLP 148
C A R+ DA + + +GL+PN + + L M+ G CL
Sbjct: 428 LCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLD 487
Query: 149 NTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSF 208
+ LCK+ +E A L++ MV G + L D C GK+ EA K
Sbjct: 488 TIFFNAIMGNLCKKGRVIE-AKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLL 546
Query: 209 LEMIEKGHKPSQVSFRRI 226
M+ G KPS V++ I
Sbjct: 547 GVMVFNGVKPSDVTYNTI 564
>gi|125548275|gb|EAY94097.1| hypothetical protein OsI_15870 [Oryza sativa Indica Group]
Length = 554
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 123/267 (46%), Gaps = 3/267 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M EMG P++V+Y ID CK R V++A+ ++E+M + P+V ++T++I GL +G
Sbjct: 234 MLEMGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGW 293
Query: 61 PDKA-RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
++A R LK +K P+ Y I YC +L A L+ MVE+GL PN TY
Sbjct: 294 TERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYT 353
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
++ L +M G LPN + ++ ++ K++ A ++ +
Sbjct: 354 TLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQ 413
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
G + +L C G + A F M+E G P ++ + + + E
Sbjct: 414 GLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEES 473
Query: 240 QNLSNKMALFGPSMIPKREEYLAEMSA 266
Q +K + G ++P ++ Y + ++
Sbjct: 474 QKFFDKCLMIG--LLPTKQTYTSMIAG 498
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 106/209 (50%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
KP++ +Y +I YC++ ++ +A ++ +M ++ + P+ +YT++IGG G D+A +
Sbjct: 311 KPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFE 370
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
++ +MK+ G P+ YNA I +C ++++A ++ +GL + TY +
Sbjct: 371 LMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHC 430
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+ + +L+ RM+ GC P+ ++ L+ +Q ++E + + ++ + G
Sbjct: 431 KQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQ 490
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
+ C +G+ A + F M++ G
Sbjct: 491 TYTSMIAGYCKVGRSTMALRVFERMVQNG 519
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 105/259 (40%), Gaps = 36/259 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV PD S+ L+ V C++ +VE+ ++ M S D + T ++ L G+
Sbjct: 164 MTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGR 223
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ + M E G P+ Y A I C + ++ A +++EMV +GL PN T+
Sbjct: 224 FKDVSEFFRRMLEMGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTT 283
Query: 121 F-------------FRVF--------YWSN---------------DLRSSWNLYCRMMGT 144
FR+F Y N L + L RM+
Sbjct: 284 LIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQ 343
Query: 145 GCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEA 204
G PNT + L+ + + A +L N M ++GF I + + D C GK+ EA
Sbjct: 344 GLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEA 403
Query: 205 EKSFLEMIEKGHKPSQVSF 223
K +G K ++++
Sbjct: 404 YKVLRMATSQGLKFDKITY 422
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 98/225 (43%), Gaps = 3/225 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G+ + + N ++ V + A K+ + M + PD S+ +++ G+
Sbjct: 129 MRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAGVCPDERSFRALVVVCCREGK 188
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++ +L M YG D A +R+ C R +D S M+E G PN Y
Sbjct: 189 VEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLEMGTPPNVVNYTA 248
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVE- 178
+ ++ ++++ M+G G PN + L+ LCK E A +L+ +++
Sbjct: 249 WIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCK-IGWTERAFRLFLKLIKS 307
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + V+ C GKL AE + M+E+G KP+ ++
Sbjct: 308 SSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTY 352
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 44/80 (55%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G PDI +Y LI YC+ RQ+E++ K +K + P +YTS+I G VG+
Sbjct: 445 MVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGR 504
Query: 61 PDKARDVLKEMKEYGCYPDA 80
A V + M + GC+ D+
Sbjct: 505 STMALRVFERMVQNGCFADS 524
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 58/131 (44%)
Query: 93 AKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS 152
A RL +A+ ++ EM GL T N RV + + ++ M G P+ +S
Sbjct: 116 AGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAGVCPDERS 175
Query: 153 CMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMI 212
LV +C R+ KVE L M GF V+ LC+ G+ + + F M+
Sbjct: 176 FRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRML 235
Query: 213 EKGHKPSQVSF 223
E G P+ V++
Sbjct: 236 EMGTPPNVVNY 246
>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
Length = 699
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 112/223 (50%), Gaps = 1/223 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G P ++ +N +I+ +CK + ++ AYK++E M ++ P+V ++T +I GL + +A
Sbjct: 227 GFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEA 286
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ +L++M GC P+ Y+ I C ++ DA L M + PN T+N+
Sbjct: 287 QQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDG 346
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + + LY RM TGC P+ + L+ + +V+ A QL+ + E G +
Sbjct: 347 LCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAA 406
Query: 185 ILVS-DVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
V+ LF +G++ +A + F +++KG P ++ +
Sbjct: 407 NAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSL 449
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 120/257 (46%), Gaps = 6/257 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISP-DVISYTSIIGGLGLVG 59
MRE G PDI++YN LID CK QV++A+++ + + + +S + ++Y+++ G +G
Sbjct: 363 MRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALG 422
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ A + + + G PD A Y + I YC R + L++EM KG P T +
Sbjct: 423 RMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLS 482
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ N + L+ M GC + +V+ R K + AL + +++K
Sbjct: 483 AVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDK 542
Query: 180 ---GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANK 235
F D L + LC +GK +A++ +M E+G + S+ R + L L
Sbjct: 543 RDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRW 602
Query: 236 QEALQNLSNKMALFGPS 252
EA Q + M GP+
Sbjct: 603 DEATQ-VFEAMVSAGPA 618
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 111/220 (50%), Gaps = 2/220 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD+++Y L+ CK + ++A ++ +M + +PD ++++++I GL G ++A V
Sbjct: 124 PDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRV 183
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIA-KRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
L+++ + G AA+ I+ C + AS ++ ++ KG +P +NL F
Sbjct: 184 LEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFC 243
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+ DL S++ L M+ GC+PN + L+ + +V A QL MV G ++
Sbjct: 244 KAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVV 303
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + LC G++ +A + F +++E+ + P V I
Sbjct: 304 TYSTVINGLCKQGQVDDAYELF-QLMERRNCPPNVVTHNI 342
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 114/245 (46%), Gaps = 5/245 (2%)
Query: 1 MREM---GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGL-G 56
+REM G PD V+++ LID CK E+A++++E + + ++ +II L
Sbjct: 149 LREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCN 208
Query: 57 LVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNAT 116
+ A VL + G P +N I +C AK L A L++ M+EKG PN
Sbjct: 209 KYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVF 268
Query: 117 TYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDM 176
T+ + +N + + L +M+ GC PN + ++ +Q +V+ A +L+ M
Sbjct: 269 TFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLM 328
Query: 177 VEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANK 235
+ ++ ++L D LC ++ EA + + M E G P +++ I L +
Sbjct: 329 ERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQV 388
Query: 236 QEALQ 240
EA Q
Sbjct: 389 DEAFQ 393
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 117/247 (47%), Gaps = 4/247 (1%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P+ +Y LI + ++ A +++E+M+ + + +T+++ GL G+ +A +
Sbjct: 55 PNKFTYGILIRGFSSAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEH 114
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
+ M + C PD Y A + C A + +A G++ EMV +G +P+ T++
Sbjct: 115 FRAMAK-DCAPDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCK 173
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCM--FLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
++ + ++ G + N+ + + +LC + VE+A ++ ++ KGF +
Sbjct: 174 FGSEEQAFRVLEDVIQRG-MGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTV 232
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNK 245
L+ +++ + C L A K MIEKG P+ +F + + AN+ Q L K
Sbjct: 233 LMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEK 292
Query: 246 MALFGPS 252
M + G S
Sbjct: 293 MVMGGCS 299
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 91/194 (46%), Gaps = 3/194 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKM---RDEDISPDVISYTSIIGGLGL 57
M G D + YN +++ + + +KA ++E++ RD +P + +++ L
Sbjct: 504 MAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQ 563
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
VG+ D A+ +L +M E G ++YN + +R +A+ + + MV G +P +T
Sbjct: 564 VGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEIST 623
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
N+ + + ++ L RM GC P+ ++C L+ + + ++A +L +M
Sbjct: 624 VNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMT 683
Query: 178 EKGFGSYILVSDVL 191
E G D+L
Sbjct: 684 EAGLEPNDTTHDLL 697
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 95/256 (37%), Gaps = 38/256 (14%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PD+ +Y LI YCK + + ++VE+M + P V + ++++GGL ++A
Sbjct: 438 GFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERA 497
Query: 65 RDVLKEMKEYGCYPDAAAYN--------------------------------------AA 86
+ M GC DA YN A
Sbjct: 498 IQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVDAL 557
Query: 87 IRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGC 146
+ + C + DA L+ +M E+G + ++YN + ++ M+ G
Sbjct: 558 VESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGP 617
Query: 147 LPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEK 206
P + ++ KV+ A +L M + G I + L C G+ A K
Sbjct: 618 APEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARK 677
Query: 207 SFLEMIEKGHKPSQVS 222
EM E G +P+ +
Sbjct: 678 LLEEMTEAGLEPNDTT 693
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 76/184 (41%), Gaps = 8/184 (4%)
Query: 76 CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSW 135
C P+ Y IR + A L A L++EM G NA + + + + +
Sbjct: 53 CMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEAL 112
Query: 136 NLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLL 195
+ R M C P+ + LV + K + A + +MV +G + L D L
Sbjct: 113 EHF-RAMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGL 171
Query: 196 CDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMAL-----FG 250
C G +A + ++I++G S +F I + L NK +++ S + + F
Sbjct: 172 CKFGSEEQAFRVLEDVIQRGMGNSDAAFETI--IQRLCNKYNSVELASKVLGVVIAKGFT 229
Query: 251 PSMI 254
P+++
Sbjct: 230 PTVL 233
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 70/163 (42%), Gaps = 4/163 (2%)
Query: 84 NAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMG 143
N A+ C R ++A L + + PN TY + R F + DL + L M
Sbjct: 26 NCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKS 85
Query: 144 TGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLV 202
+G N L+K LC VE AL+ + M K ++ L LC GK
Sbjct: 86 SGFEGNAVVHTTLMKGLCDAGRVVE-ALEHFRAMA-KDCAPDVMTYTALVHALCKAGKFD 143
Query: 203 EAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLSN 244
EA+ EM+ +G P V+F I L + ++++A + L +
Sbjct: 144 EAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLED 186
Score = 43.9 bits (102), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 55/122 (45%), Gaps = 1/122 (0%)
Query: 129 NDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVS 188
N + + L+ M C+PN + L++ ++IA+QL +M GF +V
Sbjct: 36 NRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSSGFEGNAVVH 95
Query: 189 DVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMAL 248
L LCD G++VEA + F M K P +++ + + A K + Q + +M
Sbjct: 96 TTLMKGLCDAGRVVEALEHFRAM-AKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMVA 154
Query: 249 FG 250
G
Sbjct: 155 QG 156
>gi|356557306|ref|XP_003546958.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g65820-like [Glycine max]
Length = 654
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 108/215 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++MG++PDIV YN L+ Y + ++ AY ++++MR + P+ SYT +I L +
Sbjct: 287 MKDMGIEPDIVVYNNLLGGYAQAGKMGDAYDLLKEMRRKRCEPNATSYTVLIQSLCKHER 346
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A + EM+ GC D Y+ I +C +++ L+DEM+++G PN Y
Sbjct: 347 LEEATRLFVEMQTNGCQADVVTYSTLISGFCKWGKIKRGYELLDEMIQQGHFPNQVIYQH 406
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+L L M GC P+ +++L + +V+ +QLWN+M G
Sbjct: 407 IMLAHEKKEELEECKELVNEMQKIGCAPDLSIYNTVIRLACKLGEVKEGIQLWNEMESSG 466
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
+ ++ + + G LVEA + F EM+ +G
Sbjct: 467 LSPGMDTFVIMINGFLEQGCLVEACEYFKEMVGRG 501
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 103/226 (45%), Gaps = 36/226 (15%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G +PD + CL+D CK+ V++A + E MR P V +TS++ G G+
Sbjct: 218 MPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRYR-WKPSVKHFTSLLYGWCKEGK 276
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A+ VL +MK+ G PD YN + Y A ++ DA L+ EM K PNAT+Y +
Sbjct: 277 LMEAKHVLVQMKDMGIEPDIVVYNNLLGGYAQAGKMGDAYDLLKEMRRKRCEPNATSYTV 336
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ LCK E++E A +L+ +M G
Sbjct: 337 LIQ----------------------------------SLCK-HERLEEATRLFVEMQTNG 361
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ ++ L C GK+ + EMI++GH P+QV ++ I
Sbjct: 362 CQADVVTYSTLISGFCKWGKIKRGYELLDEMIQQGHFPNQVIYQHI 407
>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 641
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 94/179 (52%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
D V++N L+D +C++ V++ +++E+M + PDVI+YT++I G G D+A +L
Sbjct: 352 DDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLL 411
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
K M GC P+ +Y ++ C A+R DA L+ M+++G PN T+N
Sbjct: 412 KNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKK 471
Query: 129 NDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ + L +M+ GC P+ S ++ + K E AL+L N M+ KG ++
Sbjct: 472 GLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTII 530
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 112/230 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G P++ ++N LI C++ E+ ++ + +M + +PD+ Y +II G+ G
Sbjct: 239 MVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGH 298
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A D+L M YG P+ YN ++ C A+R +A L+ EM ++ + T+N+
Sbjct: 299 HEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNI 358
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + + L +M+ GC+P+ + ++ ++ V+ A+ L +M G
Sbjct: 359 LVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACG 418
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALM 230
+ ++ LC + V+A++ MI++G P+ V+F + M
Sbjct: 419 CKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFM 468
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 113/246 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G PD+ Y +ID CKD E A I+ +M + P+V+ Y +++ GL +
Sbjct: 274 MPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAER 333
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A D+L EM + C D +N + +C + L+++M+E G P+ TY
Sbjct: 334 WEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTT 393
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + + L M GC PNT S ++K R E+ A +L + M+++G
Sbjct: 394 VINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQG 453
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ + L + +C G + +A + +M+ G P +S+ + + A K E
Sbjct: 454 CLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEAL 513
Query: 241 NLSNKM 246
L N M
Sbjct: 514 ELLNVM 519
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 106/230 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+KP++V YN ++ C + E+A ++ +M ED D +++ ++ G
Sbjct: 309 MPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGL 368
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+ ++L++M E+GC PD Y I +C + +A L+ M G PN +Y +
Sbjct: 369 VDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTI 428
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + L M+ GCLPN + L+ ++ VE A++L M+ G
Sbjct: 429 VLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNG 488
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALM 230
++ + D L GK EA + MI KG P+ + + + + +
Sbjct: 489 CSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASAL 538
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 87/181 (48%), Gaps = 4/181 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G P+ V++N LI+ CK VE+A +++++M SPD+ISY+++I GLG G+
Sbjct: 449 MIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGK 508
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A ++L M G P+ Y++ R + D + + + +A YN
Sbjct: 509 TEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNA 568
Query: 121 FFRVF--YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
W D + + + M+ GC+PN + L++ + V A L +++
Sbjct: 569 VISSLCKRWETD--RAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSELCS 626
Query: 179 K 179
+
Sbjct: 627 R 627
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 89/208 (42%)
Query: 16 LIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYG 75
+++ C+ A + ++ + + + D + ++ + G D+ ++L+++ +G
Sbjct: 149 ILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFG 208
Query: 76 CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSW 135
C PD +YNA ++ C+AKR D LM EMV G PN T+N +
Sbjct: 209 CEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVH 268
Query: 136 NLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLL 195
+M GC P+ + ++ + E+A + + M G ++ + + L
Sbjct: 269 EALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGL 328
Query: 196 CDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
C + EAE EM ++ V+F
Sbjct: 329 CSAERWEEAEDLLAEMFQEDCPLDDVTF 356
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 93/226 (41%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+ G D + N ++ C+ V++ +++ K+ PD++SY +++ GL + +
Sbjct: 169 LHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKR 228
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D +++ EM GC P+ A +N I C + +M E G +P+ Y
Sbjct: 229 WDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYAT 288
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ RM G PN ++K E+ E A L +M ++
Sbjct: 289 IIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQED 348
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ ++L D C G + + +M+E G P +++ +
Sbjct: 349 CPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTV 394
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 97/249 (38%), Gaps = 9/249 (3%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G +V+YN +I YC+ QV A ++ + + P+ +Y I+ L G A
Sbjct: 71 GDAAGVVAYNAMIAGYCRAGQVAAARRLAAAV---PVPPNAYTYFPIVRSLCARGLIADA 127
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
VL EM GC + + C R A + + KG + ++ NL
Sbjct: 128 LTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSA 187
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LC--KRQEKVEIALQLWNDMVEKGF 181
+ L ++ GC P+ S ++K LC KR + VE +L +MV G
Sbjct: 188 ICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVE---ELMVEMVRVGC 244
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQN 241
+ + L LC G + ++ +M E G P + I + E +
Sbjct: 245 PPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVAND 304
Query: 242 LSNKMALFG 250
+ ++M +G
Sbjct: 305 ILSRMPSYG 313
>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 901
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 105/226 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E G D +YN ID +CK +V KAY+++E+M+ + P V++Y S+I GL + +
Sbjct: 608 MKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDR 667
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + +E K G + Y++ I + R+ +A +M+E+++KGL+PN T+N
Sbjct: 668 LDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNC 727
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ + + M PN + L+ R K A W +M ++G
Sbjct: 728 LLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQG 787
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + L G + EA F G P S+ I
Sbjct: 788 LKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAI 833
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 110/226 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E G+ P++++ N +ID CK +++++A I E M + SPD +++ S+I GLG G+
Sbjct: 433 MKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGR 492
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A + ++M + P+A Y + I+++ R D + EM+ +G SP+ N
Sbjct: 493 VDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNA 552
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + + L+ + G +P+ S L+ + +L+ M E+G
Sbjct: 553 YMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQG 612
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ D C GK+ +A + EM KG +P+ V++ +
Sbjct: 613 CVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSV 658
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 95/209 (45%), Gaps = 2/209 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD V++ LID K +V+ AY++ E+M D D P+ + YTS+I G+ + +
Sbjct: 475 PDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKI 534
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
KEM GC PD NA + A L +E+ +G P+ +Y++
Sbjct: 535 FKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVK 594
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSC-MFLVKLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+ R ++ L+ M GC+ +T + F+ CK KV A QL +M KG ++
Sbjct: 595 AGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCK-SGKVNKAYQLLEEMKTKGRQPTVV 653
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
+ D L + +L EA F E G
Sbjct: 654 TYGSVIDGLAKIDRLDEAYMLFEEAKSNG 682
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 110/265 (41%), Gaps = 37/265 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
++ G+ PD V+Y +I V CK ++++A +I E+M P +Y ++I G G G+
Sbjct: 294 IKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGK 353
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNA-------------AIRNY----------------- 90
D+A +L+ K GC P AYN A+R +
Sbjct: 354 FDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKKDAAPNLSTYNVL 413
Query: 91 ----CIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGC 146
C A + A + D M E GL PN T N+ + L + +++ M C
Sbjct: 414 IDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKIC 473
Query: 147 LPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEK 206
P+ + L+ +Q +V+ A +L+ M++ +V L G+ + K
Sbjct: 474 SPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHK 533
Query: 207 SFLEMIEKGHKPSQVSFRRIKALME 231
F EMI +G P R + A M+
Sbjct: 534 IFKEMIHRGCSP---DLRLLNAYMD 555
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 106/222 (47%), Gaps = 1/222 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E+G + + + +I V+ ++ +++ A ++++M+ + D++ Y I G G+
Sbjct: 224 MQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGK 283
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A E+K +G PD Y + I C RL +A + ++M + P A YN
Sbjct: 284 VDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNT 343
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + +++L R GC+P+ + ++ ++ ++ AL+ + +M +K
Sbjct: 344 MIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEM-KKD 402
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
+ +VL D+LC G++ A K M E G P+ ++
Sbjct: 403 AAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMT 444
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 85/169 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+ + G+ P++ ++NCL+D K ++ +A + M++ +P+ I+Y+ +I GL V +
Sbjct: 713 LMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRK 772
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA +EM++ G P+ Y I A + +AS L + G P++ +YN
Sbjct: 773 FNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNA 832
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIA 169
+S ++ ++ GC +T++C+ L+ ++ E +E A
Sbjct: 833 IIEGLSYSRRAMEAYKIFEETRMKGCNIHTKTCIALLDALQKDECLEQA 881
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 97/230 (42%), Gaps = 35/230 (15%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G +P +V+Y +ID K ++++AY + E+ + + +V+ Y+S+I G G VG+
Sbjct: 643 MKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGR 702
Query: 61 PDKARDVLKEMKEYG--------------------------CY---------PDAAAYNA 85
D+A +++E+ + G C+ P+ Y+
Sbjct: 703 IDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSI 762
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
I C ++ A EM ++GL PN TY + ++ + +L+ R G
Sbjct: 763 LINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANG 822
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLL 195
+P++ S +++ + A +++ + KG + L D L
Sbjct: 823 GVPDSASYNAIIEGLSYSRRAMEAYKIFEETRMKGCNIHTKTCIALLDAL 872
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 108/262 (41%), Gaps = 40/262 (15%)
Query: 22 KDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAA 81
K ++ + + +++ MR P +YT++IG L V + D + +M+E G
Sbjct: 175 KSNKLREGFDLIQCMRKFKFRPAFSAYTTLIGALSSVQESDIMLTLFHQMQELGYEVSVH 234
Query: 82 AYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRM 141
+ IR + RL A L+DEM L + YN+ F + + +W + +
Sbjct: 235 LFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEI 294
Query: 142 MGTGCLPN--TQSCMFLVKLCKRQ---EKVEIALQL-----------WNDMVEKGFGSY- 184
G LP+ T + M V LCK E VEI Q+ +N M+ G+GS
Sbjct: 295 KSHGLLPDDVTYTSMIGV-LCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMI-MGYGSAG 352
Query: 185 --------------------ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
++ + + L G+L EA ++F EM +K P+ ++
Sbjct: 353 KFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEM-KKDAAPNLSTYN 411
Query: 225 RIKALMELANKQEALQNLSNKM 246
+ ++ A + EA + + M
Sbjct: 412 VLIDMLCKAGEVEAAFKVRDAM 433
>gi|357121285|ref|XP_003562351.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 624
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 97/187 (51%), Gaps = 1/187 (0%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
D V++N L+D +C++ V++ +++E+M + PDVI+YT++I G G D+A +L
Sbjct: 335 DDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLL 394
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
K M GC P+ +Y ++ C +R DA LM M+++G PN T+N
Sbjct: 395 KNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKK 454
Query: 129 NDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV- 187
+ + L +M+ GC P+ S ++ + K E AL+L N M+ KG ++
Sbjct: 455 GLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITY 514
Query: 188 SDVLFDL 194
S + F L
Sbjct: 515 SSMAFAL 521
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 106/223 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+KP++V YN ++ C + EKA +++ +M ++ D +++ ++ G
Sbjct: 292 MPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGL 351
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+ ++L++M E+GC PD Y I +C + +A L+ M G PN +Y +
Sbjct: 352 VDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTI 411
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + L RM+ GCLPN + ++ ++ VE A++L M+ G
Sbjct: 412 VLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNG 471
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + D L GK EA + MI KG P+ +++
Sbjct: 472 CNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITY 514
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 116/247 (46%), Gaps = 2/247 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G PDI Y +ID CK+ E A +I+ +M + P+V+ Y +++ G+ +
Sbjct: 257 MAQHGCTPDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADR 316
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA ++L EM + C D +N + +C + L+++M+E G P+ TY
Sbjct: 317 WEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTT 376
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
F + + L M GC PNT S ++K LC + V+ A +L + M+++
Sbjct: 377 VINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVD-AEELMSRMIQQ 435
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
G + + + + LC G + +A + +M+ G P +S+ + + A K E
Sbjct: 436 GCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEA 495
Query: 240 QNLSNKM 246
L N M
Sbjct: 496 LELLNVM 502
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 107/232 (46%), Gaps = 10/232 (4%)
Query: 5 GVKPDIVSYNCLIDVYCKDR----------QVEKAYKIVEKMRDEDISPDVISYTSIIGG 54
G + DIVSYN ++ C + ++ K ++ + +M +PD+ Y +II G
Sbjct: 216 GCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDG 275
Query: 55 LGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPN 114
+ G + A ++L M YG P+ YN ++ C A R A L+ EM +K +
Sbjct: 276 ICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLD 335
Query: 115 ATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWN 174
T+N+ F + + L +M+ GC+P+ + ++ ++ ++ A+ L
Sbjct: 336 DVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLK 395
Query: 175 DMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+M G + ++ LC + V+AE+ MI++G P+ V+F I
Sbjct: 396 NMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTI 447
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 115/252 (45%), Gaps = 4/252 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G PD+++Y +I+ +CK+ +++A +++ M P+ ISYT ++ GL +
Sbjct: 362 MLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTER 421
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +++ M + GC P+ +N I C + A L+ +M+ G +P+ +Y+
Sbjct: 422 WVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYST 481
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + L M+ G PN + + R+ +++ +Q+++++ +
Sbjct: 482 VIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQDAT 541
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALME---LANKQ 236
S ++ + + LC + A M+ G P++ ++ IK L L Q
Sbjct: 542 IRSDAVLYNAVISSLCKRRETDLAIDFLAYMVSNGCMPNESTYTALIKGLASEGLLCEAQ 601
Query: 237 EALQNLSNKMAL 248
+ L L ++ A+
Sbjct: 602 DLLSELCSRRAV 613
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 95/224 (42%), Gaps = 10/224 (4%)
Query: 13 YNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMK 72
Y+ +I+ C+ A +++E + + + D + +I + G D+ ++L+++
Sbjct: 154 YHVIIESACRSGGYSSALRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLP 213
Query: 73 EYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMV----------EKGLSPNATTYNLFF 122
+GC D +YNA ++ C AKR D LMDEMV + G +P+ Y
Sbjct: 214 LFGCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATII 273
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
+ + RM G PN ++K ++ E A +L +M +K
Sbjct: 274 DGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCP 333
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ ++L D C G + + +M+E G P +++ +
Sbjct: 334 LDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTV 377
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 101/252 (40%), Gaps = 13/252 (5%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G +V YN ++ YC+ QVE A ++ + + P+ +Y ++ GL G+ A
Sbjct: 79 GNAAGVVDYNAMVAGYCRVGQVEAARRLAAAV---PVPPNAYTYFPVVRGLCGRGRIADA 135
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
VL EM C P Y+ I + C + A +++ + KG + + NL
Sbjct: 136 LAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSSALRVLEALHAKGSTLDTGNCNLVINA 195
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LC--KRQEKVEIAL-------QLWN 174
+ + ++ GC + S ++K LC KR VE + + +
Sbjct: 196 ICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEALS 255
Query: 175 DMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELAN 234
M + G I + + D +C G A + M G KP+ V + + + A+
Sbjct: 256 QMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSAD 315
Query: 235 KQEALQNLSNKM 246
+ E + L +M
Sbjct: 316 RWEKAEELLTEM 327
>gi|414591641|tpg|DAA42212.1| TPA: hypothetical protein ZEAMMB73_141452 [Zea mays]
Length = 472
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 115/223 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ PD+V+YN ++ CK R ++KA + +M ++ + P+ +Y ++I G GQ
Sbjct: 211 MVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQ 270
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A V KEM+ + PD + + + C ++++A + D M KG +P+ +YN+
Sbjct: 271 WKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNI 330
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L +L+ M+G G P+ + +K ++ A+ ++N+M + G
Sbjct: 331 MLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVQIKAYANCGMLDKAMIIFNEMRDHG 390
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + LC +GK+ +A + F +MI++G P + ++
Sbjct: 391 VKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAY 433
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 109/230 (47%), Gaps = 5/230 (2%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDI--SPDVISYTSIIGGLGLVGQ 60
E+G PD+ SYN L+ C + +A ++ M + SPDV++Y ++I G G
Sbjct: 141 ELGCVPDVFSYNILLKSLCNQGKSGQADNLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGD 200
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA D+ KEM + G PD YN+ + C A+ + A + +MV K + PN TYN
Sbjct: 201 VNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNN 260
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ + + + ++ M LP+ + M + LCK K++ A +++ M K
Sbjct: 261 LIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCK-YGKIKEARDVFDTMAMK 319
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKA 228
G + +++ + G LV+ F M+ G P +F +IKA
Sbjct: 320 GQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVQIKA 369
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 97/200 (48%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
V P+ +YN LI Y Q ++A ++ ++MR I PDV++ + ++G L G+ +AR
Sbjct: 251 VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEAR 310
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
DV M G PD +YN + Y L D + L D M+ G++P+ T+N+ + +
Sbjct: 311 DVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVQIKAY 370
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
L + ++ M G P+ + ++ R K++ A++ +N M+++G
Sbjct: 371 ANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDK 430
Query: 186 LVSDVLFDLLCDMGKLVEAE 205
+ L C G L++ +
Sbjct: 431 YAYNCLIQGFCTHGILLKTQ 450
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 51/98 (52%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ PD ++N I Y ++KA I +MRD + PDV++Y ++I L +G+ D A
Sbjct: 355 GIAPDFYTFNVQIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDA 414
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGL 102
+ +M + G PD AYN I+ +C L G+
Sbjct: 415 MEKFNQMIDQGVAPDKYAYNCLIQGFCTHGILLKTQGI 452
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 58/121 (47%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PD+ SYN +++ Y + + + M + I+PD ++ I G DKA
Sbjct: 320 GQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVQIKAYANCGMLDKA 379
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ EM+++G PD Y I C ++ DA ++M+++G++P+ YN +
Sbjct: 380 MIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQG 439
Query: 125 F 125
F
Sbjct: 440 F 440
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 99/256 (38%), Gaps = 38/256 (14%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ P +Y L+D + + E A ++ + D I + ++ G + D+A
Sbjct: 73 LSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEAL 132
Query: 66 DVL-KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGL--SPNATTYNLFF 122
D+L E GC PD +YN +++ C + A L+ M E G SP+ YN
Sbjct: 133 DILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADNLLRMMAEGGTVCSPDVVAYNTVI 192
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQ--EKVEI----------- 168
F+ D+ + +L+ M+ G P+ + +V LCK + +K E
Sbjct: 193 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVL 252
Query: 169 ---------------------ALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKS 207
A++++ +M ++ +L LC GK+ EA
Sbjct: 253 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDV 312
Query: 208 FLEMIEKGHKPSQVSF 223
F M KG P S+
Sbjct: 313 FDTMAMKGQNPDVFSY 328
>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
Length = 1205
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 106/213 (49%), Gaps = 2/213 (0%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ P++ +YN L+D CK+ +V++A ++ M + PDVI+Y++++ G LV + KA+
Sbjct: 265 INPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQ 324
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
V M G PD Y I +C K + +A L EM +K + P TY+
Sbjct: 325 HVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGL 384
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSY 184
S + W+L M G N + L+ LCK ++ A+ L+N M ++G
Sbjct: 385 CKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGH-LDRAIALFNKMKDQGIRPN 443
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHK 217
+L D LC G+L +A++ F +++ KG+
Sbjct: 444 TFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYH 476
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 115/238 (48%), Gaps = 2/238 (0%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
VKPD+++Y+ L+D Y +V+KA + M ++PDV +YT +I G D+A
Sbjct: 300 VKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEAL 359
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
++ KEM + P Y++ I C + R+ L+DEM ++G N TY+
Sbjct: 360 NLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGL 419
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ L + L+ +M G PNT + L+ + +++ A +++ D++ KG+ +
Sbjct: 420 CKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNV 479
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLS 243
+V+ D C G L EA +M + G P V+F I ++ L K E N+
Sbjct: 480 YTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTFEII--IIALFKKDENGGNVG 535
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 111/221 (50%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
KP++V Y+ +ID CK + V +AY + +M + IS DV++Y+++I G + G+ +A
Sbjct: 195 TKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAI 254
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+L EM P+ YN + C ++++A ++ M++ + P+ TY+ +
Sbjct: 255 GLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGY 314
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ +++ + +++ M G P+ + L+ + + V+ AL L+ +M +K I
Sbjct: 315 FLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGI 374
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ L D LC G++ EM ++G + +++ +
Sbjct: 375 VTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSL 415
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 83/165 (50%), Gaps = 1/165 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + + P IV+Y+ LID CK ++ + ++++M D +VI+Y+S+I GL G
Sbjct: 365 MHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGH 424
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + +MK+ G P+ + + C RL+DA + +++ KG N TYN+
Sbjct: 425 LDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNV 484
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSC-MFLVKLCKRQE 164
L + + +M GC+P+ + + ++ L K+ E
Sbjct: 485 MIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTFEIIIIALFKKDE 529
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 110/246 (44%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G++PD+++ N LI+ +C Q+ + ++ K+ PD ++ ++I GL L GQ KA
Sbjct: 89 GIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKA 148
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++ G + +Y I C R A L+ ++ + PN Y+
Sbjct: 149 LHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDA 208
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ ++ L+ M G + + L+ + K++ A+ L N+MV K
Sbjct: 209 LCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPN 268
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSN 244
+ ++L D LC GK+ EA+ M++ KP +++ + L + + Q++ N
Sbjct: 269 VYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFN 328
Query: 245 KMALFG 250
M+L G
Sbjct: 329 AMSLMG 334
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 85/179 (47%), Gaps = 2/179 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G + + VSY LI+ CK A K++ K+ PDV+ Y +II L KA
Sbjct: 1026 GFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALCKHQLVSKA 1085
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ EM G D YN I +CI +L++A GL+++MV K ++PN TYN+
Sbjct: 1086 YGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRTYNILVDA 1145
Query: 125 F--YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
+ L S ++ +M GC N + ++ +++ + +L ++M+ +G
Sbjct: 1146 LCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEKLLHEMIARGL 1204
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 100/213 (46%), Gaps = 2/213 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PD +++ LI+ C QV KA +K+ + + +SY ++I G+ +G A
Sbjct: 991 GYHPDTITFTTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAA 1050
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+L+++ PD YN I C + + A GL EM KG+S + TYN
Sbjct: 1051 IKLLRKIDGRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYG 1110
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKR-QEKVEIALQLWNDMVEKGFG 182
F L+ + L +M+ PN ++ LV LCK ++ ++ +L + + M + G
Sbjct: 1111 FCIVGKLKEAIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCK 1170
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
+ + +++ L + + + EK EMI +G
Sbjct: 1171 ANAVTFEIIISALFEKDENDKVEKLLHEMIARG 1203
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 112/248 (45%), Gaps = 2/248 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G++PD+ + N LI+ +C Q+ + I+ K+ PD I++T++I GL L GQ +KA
Sbjct: 956 GIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKA 1015
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++ G + +Y I C R A L+ ++ + P+ YN
Sbjct: 1016 LHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDA 1075
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ ++ L+ M G + + L+ K++ A+ L N MV K
Sbjct: 1076 LCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPN 1135
Query: 185 ILVSDVLFDLLCDMGK-LVEAEKSFLEMIE-KGHKPSQVSFRRIKALMELANKQEALQNL 242
+ ++L D LC GK L++ S L +E G K + V+F I + + ++ + ++ L
Sbjct: 1136 VRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEKL 1195
Query: 243 SNKMALFG 250
++M G
Sbjct: 1196 LHEMIARG 1203
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 83/197 (42%), Gaps = 2/197 (1%)
Query: 24 RQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAY 83
+ A + ++ + I PD+ + +I +GQ +L ++ + G +PD +
Sbjct: 940 KHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITF 999
Query: 84 NAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMG 143
I C+ ++ A D+++ +G N +Y D R++ L ++ G
Sbjct: 1000 TTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDG 1059
Query: 144 TGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLV 202
P+ ++ LCK Q V A L+ +M KG + ++ + L C +GKL
Sbjct: 1060 RLTKPDVVMYNTIIDALCKHQ-LVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLK 1118
Query: 203 EAEKSFLEMIEKGHKPS 219
EA +M+ K P+
Sbjct: 1119 EAIGLLNKMVLKTINPN 1135
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 58/113 (51%), Gaps = 2/113 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ D+V+YN LI +C ++++A ++ KM + I+P+V +Y ++ L G+
Sbjct: 1092 MNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRTYNILVDALCKEGK 1151
Query: 61 P--DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGL 111
D++ +L +M++ GC +A + I L+ EM+ +GL
Sbjct: 1152 DLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEKLLHEMIARGL 1204
>gi|356544698|ref|XP_003540784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Glycine max]
Length = 495
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 121/244 (49%), Gaps = 10/244 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G++P +V+YN ++ Y + Q+++A++ +M+ DV++YT++I G G+ G
Sbjct: 234 MVQRGIEPTMVTYNTMLKGYFRSNQIKEAWEFYLEMKKRKCEIDVVTYTTVIHGFGVAGD 293
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGL-SPNATTYN 119
KA+ V EM + G P+ A YNA I+ C + +A + +EM +G+ PN TYN
Sbjct: 294 VKKAKRVFHEMVKEGVVPNVATYNALIQVLCKKDSVENAVVVFEEMAREGVCVPNVVTYN 353
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ R D+ + RM G Q+ +++ +VE AL+++ M
Sbjct: 354 VVIRGLCHVGDMERALGFMERMGEHGLRACVQTYNVVIRYFCDAGEVEKALEVFGKM--- 410
Query: 180 GFGSYILVSDVLFDLLCDM------GKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELA 233
G GS + D L+ M LV A K ++M+++G P + +F R+ + +
Sbjct: 411 GDGSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLMDMVDRGFLPRKFTFNRVLNGLVIT 470
Query: 234 NKQE 237
Q+
Sbjct: 471 GNQD 474
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 109/216 (50%), Gaps = 2/216 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G++ D+ S+N L+D+ CK ++VE A+ +++ + PD ++Y + G L+ +
Sbjct: 165 MAEHGIRQDLHSFNTLLDILCKSKRVETAHSLLKTLTSR-FRPDTVTYNILANGYCLIKR 223
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A VLKEM + G P YN ++ Y + ++++A EM ++ + TY
Sbjct: 224 TPMALRVLKEMVQRGIEPTMVTYNTMLKGYFRSNQIKEAWEFYLEMKKRKCEIDVVTYTT 283
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + D++ + ++ M+ G +PN + L+++ +++ VE A+ ++ +M +G
Sbjct: 284 VIHGFGVAGDVKKAKRVFHEMVKEGVVPNVATYNALIQVLCKKDSVENAVVVFEEMAREG 343
Query: 181 F-GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
++ +V+ LC +G + A M E G
Sbjct: 344 VCVPNVVTYNVVIRGLCHVGDMERALGFMERMGEHG 379
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 114/234 (48%), Gaps = 1/234 (0%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
+PD V+YN L + YC ++ A +++++M I P +++Y +++ G Q +A +
Sbjct: 205 RPDTVTYNILANGYCLIKRTPMALRVLKEMVQRGIEPTMVTYNTMLKGYFRSNQIKEAWE 264
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
EMK+ C D Y I + +A ++ A + EMV++G+ PN TYN +V
Sbjct: 265 FYLEMKKRKCEIDVVTYTTVIHGFGVAGDVKKAKRVFHEMVKEGVVPNVATYNALIQVLC 324
Query: 127 WSNDLRSSWNLYCRMMGTG-CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ + ++ ++ M G C+PN + +++ +E AL M E G + +
Sbjct: 325 KKDSVENAVVVFEEMAREGVCVPNVVTYNVVIRGLCHVGDMERALGFMERMGEHGLRACV 384
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
+V+ CD G++ +A + F +M + P+ ++ + + M + K E L
Sbjct: 385 QTYNVVIRYFCDAGEVEKALEVFGKMGDGSCLPNLDTYNVLISAMFVRKKSEDL 438
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/264 (20%), Positives = 107/264 (40%), Gaps = 36/264 (13%)
Query: 12 SYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEM 71
S++ +D+ + R A+ +V +MR + P + + G+P +A M
Sbjct: 106 SFDHAVDIAARMRDFNSAWALVGRMRSLRLGPSPKTLAILAERYASNGKPHRAVRTFLSM 165
Query: 72 KEYGCYPDAAAYNAAIRNYCIAKRLRDASGL----------------------------- 102
E+G D ++N + C +KR+ A L
Sbjct: 166 AEHGIRQDLHSFNTLLDILCKSKRVETAHSLLKTLTSRFRPDTVTYNILANGYCLIKRTP 225
Query: 103 -----MDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV 157
+ EMV++G+ P TYN + ++ SN ++ +W Y M C + + ++
Sbjct: 226 MALRVLKEMVQRGIEPTMVTYNTMLKGYFRSNQIKEAWEFYLEMKKRKCEIDVVTYTTVI 285
Query: 158 KLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGH- 216
V+ A +++++MV++G + + L +LC + A F EM +G
Sbjct: 286 HGFGVAGDVKKAKRVFHEMVKEGVVPNVATYNALIQVLCKKDSVENAVVVFEEMAREGVC 345
Query: 217 KPSQVSFR-RIKALMELANKQEAL 239
P+ V++ I+ L + + + AL
Sbjct: 346 VPNVVTYNVVIRGLCHVGDMERAL 369
>gi|294461967|gb|ADE76539.1| unknown [Picea sitchensis]
Length = 486
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 103/223 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+ E G+ P+ +YN LI +C ++ AY + KM + PDV +Y+ ++ GL Q
Sbjct: 229 LHEFGISPNTRTYNILIRAHCHSDKLSHAYFLFNKMHKQGCIPDVETYSILMQGLCRKSQ 288
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A VL EM G PDA YN + + C LR+A L+ +M G +P+ YN
Sbjct: 289 VKTALGVLDEMLNKGYVPDALTYNTLLNSLCRKMNLREAYRLLSKMKVMGCNPDVINYNT 348
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + + M GCLPN S LV + K + A +M+ G
Sbjct: 349 VITGFCREGRALDACQILRDMPENGCLPNALSYRTLVNGLCNEGKFDEAKDFVEEMISNG 408
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
F +I + +L LC+ GK+ EA + + M ++ P + ++
Sbjct: 409 FIPHISIYHLLITGLCNEGKVGEACEVLVMMTKQTLAPHESTW 451
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 103/218 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G +P +N L+ V + + +E A + +K+ + ISP+ +Y +I +
Sbjct: 194 MLEFGYEPLAKHFNVLLIVLIEHKCLETALSLFKKLHEFGISPNTRTYNILIRAHCHSDK 253
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A + +M + GC PD Y+ ++ C +++ A G++DEM+ KG P+A TYN
Sbjct: 254 LSHAYFLFNKMHKQGCIPDVETYSILMQGLCRKSQVKTALGVLDEMLNKGYVPDALTYNT 313
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+LR ++ L +M GC P+ + ++ R+ + A Q+ DM E G
Sbjct: 314 LLNSLCRKMNLREAYRLLSKMKVMGCNPDVINYNTVITGFCREGRALDACQILRDMPENG 373
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
L L + LC+ GK EA+ EMI G P
Sbjct: 374 CLPNALSYRTLVNGLCNEGKFDEAKDFVEEMISNGFIP 411
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 109/225 (48%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
R+ G K +Y+ LI + RQ + ++++MR + + II G VG P
Sbjct: 125 RQPGFKHSYSTYHTLICKLGRARQFKTMEGLIQQMRKDGCPYTPGLFVDIIEIYGEVGMP 184
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
++A +M E+G P A +N + K L A L ++ E G+SPN TYN+
Sbjct: 185 NEAIKAFHQMLEFGYEPLAKHFNVLLIVLIEHKCLETALSLFKKLHEFGISPNTRTYNIL 244
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
R S+ L ++ L+ +M GC+P+ ++ L++ R+ +V+ AL + ++M+ KG+
Sbjct: 245 IRAHCHSDKLSHAYFLFNKMHKQGCIPDVETYSILMQGLCRKSQVKTALGVLDEMLNKGY 304
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
L + L + LC L EA + +M G P +++ +
Sbjct: 305 VPDALTYNTLLNSLCRKMNLREAYRLLSKMKVMGCNPDVINYNTV 349
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 70/122 (57%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ MG PD+++YN +I +C++ + A +I+ M + P+ +SY +++ GL G+
Sbjct: 334 MKVMGCNPDVINYNTVITGFCREGRALDACQILRDMPENGCLPNALSYRTLVNGLCNEGK 393
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A+D ++EM G P + Y+ I C ++ +A ++ M ++ L+P+ +T+++
Sbjct: 394 FDEAKDFVEEMISNGFIPHISIYHLLITGLCNEGKVGEACEVLVMMTKQTLAPHESTWSV 453
Query: 121 FF 122
Sbjct: 454 LL 455
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 52/108 (48%), Gaps = 1/108 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G P+ +SY L++ C + + ++A VE+M P + Y +I GL G+
Sbjct: 369 MPENGCLPNALSYRTLVNGLCNEGKFDEAKDFVEEMISNGFIPHISIYHLLITGLCNEGK 428
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVE 108
+A +VL M + P + ++ + C + +A L+D++ E
Sbjct: 429 VGEACEVLVMMTKQTLAPHESTWSVLLMRICEDSQ-TEARELVDKLSE 475
>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
Length = 883
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 114/241 (47%), Gaps = 1/241 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ PD V+YN L+D +CK+ Q+ A+ I M + PD ++T++I GL +G+ ++A
Sbjct: 435 GLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQA 494
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+L M + G D + A I +C + +D L + MVE A T+N F
Sbjct: 495 NGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDA 554
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
L + + +MM G +P+ + L++ R + ++L++ M + G
Sbjct: 555 LGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPN 614
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEALQNLS 243
+ ++ + LC+ G++ EAE M G P+ ++ +KA ++ A Q +S
Sbjct: 615 VYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVS 674
Query: 244 N 244
Sbjct: 675 T 675
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 111/238 (46%), Gaps = 1/238 (0%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
+E +P+ V+Y+ LI C+ ++E+A+++ ++M ++ P +YT +I +G
Sbjct: 257 KEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMT 316
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
DKA +L EM C P+ Y I C ++ +A+G+ +M++ GL P T+N
Sbjct: 317 DKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNAL 376
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
+ + S++ L M C PN ++ L++ R K A L +V+ G
Sbjct: 377 INGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGL 436
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEA 238
+ ++L D C G+L A F M G +P +F I L +L ++A
Sbjct: 437 LPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQA 494
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 103/223 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G +P +Y LI C +KA K++++M + P+V +YT +I L G+
Sbjct: 291 MVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGK 350
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A V ++M ++G P +NA I YC + A L+ M + PN TYN
Sbjct: 351 IEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNE 410
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ L R++ G LP+ + LV ++ ++ +A ++N M G
Sbjct: 411 LMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAG 470
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
L D LC +G+L +A M++KG +V+F
Sbjct: 471 LEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTF 513
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 97/202 (48%), Gaps = 22/202 (10%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ P +V++ LI+ +C+ + + K++E+M+ SP+V +YT II GL G+
Sbjct: 571 MMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGR 630
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A +L M +G P+ Y ++ + A RL A ++ MV+ G PN+ Y+
Sbjct: 631 VEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSA 690
Query: 121 FFRVFYWSND------LRSSWNLYCRMMGT-----GCLPN-TQSC---------MFLVKL 159
F SN L S+ +L R + + CL N + C +V L
Sbjct: 691 LLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSNEIKKCGVPTEDLYNFLVVGL 750
Query: 160 CKRQEKVEIALQLWNDMVEKGF 181
CK +E A QL DMV+ G
Sbjct: 751 CKEGRIIE-ADQLTQDMVKHGL 771
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 101/217 (46%), Gaps = 5/217 (2%)
Query: 1 MREMGVK---PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGL 57
+ EM K P++ +Y LID C++ ++E+A + KM + P +I++ ++I G
Sbjct: 323 LDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCK 382
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
G A +L M++ C P+ YN + C + A L+ +V+ GL P+ T
Sbjct: 383 EGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVT 442
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDM 176
YN+ F L ++N++ M G P+ + L+ LCK ++E A + M
Sbjct: 443 YNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLG-RLEQANGILGSM 501
Query: 177 VEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIE 213
V+KG + L D C +GK + F M+E
Sbjct: 502 VKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVE 538
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 70/140 (50%)
Query: 12 SYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEM 71
++NC +D KD ++ +A ++ KM + P V+++T +I G G+ + +L+ M
Sbjct: 547 TFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERM 606
Query: 72 KEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDL 131
K+ GC P+ Y I C R+ +A ++ M G+SPN TY + + + L
Sbjct: 607 KQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRL 666
Query: 132 RSSWNLYCRMMGTGCLPNTQ 151
++ + M+ GC PN+
Sbjct: 667 DRAFQIVSTMVKNGCQPNSH 686
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 99/223 (44%), Gaps = 6/223 (2%)
Query: 11 VSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKE 70
+ Y +++ CK+ V+ A K+ D TS++ +A V ++
Sbjct: 195 IDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEK 254
Query: 71 M-KEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSN 129
M KE C P++ Y+ I C A RL +A L EMVEKG P+ TY + +
Sbjct: 255 MSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIG 314
Query: 130 DLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSD 189
+ + M C+PN + L+ R+ K+E A ++ M++ G I+ +
Sbjct: 315 MTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFN 374
Query: 190 VLFDLLCDMGKLVEAEKSFLEMIEKGH-KPSQVSFRRIKALME 231
L + C G +V A + L ++EKG+ KP + R LME
Sbjct: 375 ALINGYCKEGWVVSAFQ-LLSVMEKGNCKP---NIRTYNELME 413
>gi|242095042|ref|XP_002438011.1| hypothetical protein SORBIDRAFT_10g006490 [Sorghum bicolor]
gi|241916234|gb|EER89378.1| hypothetical protein SORBIDRAFT_10g006490 [Sorghum bicolor]
Length = 1443
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 107/223 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+R+ G++PD+++YN LI + +E A + E+M + PD+ +Y +++ G G+
Sbjct: 284 VRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEEMIASECRPDLWTYNAMVSVHGRCGK 343
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A + E+ E G PDA YN+ + + + +E+V+ G N TYN
Sbjct: 344 AEEAERLFGELVEKGFMPDAVTYNSLLYAFAKEGNVDKVEHTCEELVKAGFKKNEITYNT 403
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++ L + LY M GC P+ + ++ + +K+ A ++ DM + G
Sbjct: 404 MIHMYGKMGRLDLAVGLYDEMRAVGCTPDAVTYTVMIDSLGKMDKIAEAGKVLEDMADAG 463
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ L G+ +AEK+F MI G KP ++++
Sbjct: 464 LKPTLVAFSALICAYAKGGRRADAEKTFDCMIASGVKPDRLAY 506
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 108/225 (48%), Gaps = 2/225 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEK--AYKIVEKMRDEDISPDVISYTSIIGGLGLV 58
M + G+ PD+VS+N LI+ K + A ++ ++R + PDVI+Y ++I
Sbjct: 247 MHDRGIDPDLVSFNTLINARSKSGCLAAGVALDLLFEVRQSGLRPDVITYNTLISACSQS 306
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
+ A V +EM C PD YNA + + + +A L E+VEKG P+A TY
Sbjct: 307 SNLEDAVTVFEEMIASECRPDLWTYNAMVSVHGRCGKAEEAERLFGELVEKGFMPDAVTY 366
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
N F ++ + ++ G N + ++ + + ++++A+ L+++M
Sbjct: 367 NSLLYAFAKEGNVDKVEHTCEELVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRA 426
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G + V+ D L M K+ EA K +M + G KP+ V+F
Sbjct: 427 VGCTPDAVTYTVMIDSLGKMDKIAEAGKVLEDMADAGLKPTLVAF 471
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 108/235 (45%), Gaps = 8/235 (3%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G K + ++YN +I +Y K +++ A + ++MR +PD ++YT +I LG + + +A
Sbjct: 393 GFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAVGCTPDAVTYTVMIDSLGKMDKIAEA 452
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
VL++M + G P A++A I Y R DA D M+ G+ P+ Y + V
Sbjct: 453 GKVLEDMADAGLKPTLVAFSALICAYAKGGRRADAEKTFDCMIASGVKPDRLAYLVMLDV 512
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
F S + LY MM P+ L+ +++K E ++ DM S
Sbjct: 513 FARSGETEKMLRLYRTMMNDNYRPDDDMYQVLLVALAKEDKCEEIEEIIQDMELLCQMSL 572
Query: 185 ILVSDVLFDLLC--DMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQE 237
++S +L C GKL+ +K+ L+ G+KP S I + K E
Sbjct: 573 GVISTILIKARCVSQGGKLL--KKACLQ----GYKPDAKSLWSIMNAYVMTEKHE 621
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 105/220 (47%), Gaps = 8/220 (3%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P + ++ V + RQ A ++ + E + V + +++G G+ D AR +
Sbjct: 186 PASRAVAVVLGVLGRARQDSIAEEVFLRFAGEGATVQV--FNAMMGVYARSGRFDDARQL 243
Query: 68 LKEMKEYGCYPDAAAYNAAI----RNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
L M + G PD ++N I ++ C+A + A L+ E+ + GL P+ TYN
Sbjct: 244 LDTMHDRGIDPDLVSFNTLINARSKSGCLAAGV--ALDLLFEVRQSGLRPDVITYNTLIS 301
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
S++L + ++ M+ + C P+ + +V + R K E A +L+ ++VEKGF
Sbjct: 302 ACSQSSNLEDAVTVFEEMIASECRPDLWTYNAMVSVHGRCGKAEEAERLFGELVEKGFMP 361
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + L G + + E + E+++ G K +++++
Sbjct: 362 DAVTYNSLLYAFAKEGNVDKVEHTCEELVKAGFKKNEITY 401
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 103/249 (41%), Gaps = 6/249 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+++M K + ++D + K V + KI M+ P++ Y S+ L+
Sbjct: 841 LQDMDFKISKSTVLLMLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMTS---LLCH 897
Query: 61 PDKARDV---LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
++ RDV + EM+ G PD + +N+ + Y A + + ++E GL P+ T
Sbjct: 898 HNRFRDVELMIAEMEGAGFKPDLSIFNSLLNMYTAAGNFDRTTQVYQSILEAGLEPDEDT 957
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
YN ++ S + L M G P QS L+ + E E A QL+ +M
Sbjct: 958 YNTLIVMYCRSLRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQLFEEMR 1017
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQE 237
K + + ++ + + G +AE M E G +P+ + + A +
Sbjct: 1018 SKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPH 1077
Query: 238 ALQNLSNKM 246
+N+ N +
Sbjct: 1078 EAENVLNSL 1086
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 42/219 (19%), Positives = 86/219 (39%), Gaps = 2/219 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVIS-YTSIIGGLGLVG 59
M+ +G++ Y +I YCK E A+ +++ I +++S II G +
Sbjct: 701 MQFIGIEASKNIYESIISTYCKLGFPETAHGLMDDALQSGIPLNILSCRVIIIEAYGNIK 760
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+A ++K +++ D +NA I Y + A + D M++ G P + N
Sbjct: 761 LWQQAEILVKGLRQASGI-DRRIWNALIHAYAESGLYEKARAVFDNMIKTGPLPTVDSVN 819
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
R L + + + + + + ++ + V ++++N M
Sbjct: 820 GMMRALIVDGRLDELYVVVGELQDMDFKISKSTVLLMLDAFAKAGDVFEVMKIYNGMKAA 879
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
G+ + + + LLC + + E EM G KP
Sbjct: 880 GYLPNMHLYRSMTSLLCHHNRFRDVELMIAEMEGAGFKP 918
Score = 40.8 bits (94), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 52/119 (43%), Gaps = 16/119 (13%)
Query: 13 YNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMK 72
Y+ ++ +Y KA ++ M+++ I P + + ++ G GQP +A +VL +K
Sbjct: 1028 YHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPHEAENVLNSLK 1087
Query: 73 ----EYGCYPDAAAYNAAIRN----YCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
E P + ++A ++N I K L EM G+ P+ + F R
Sbjct: 1088 SSSLEVSTLPYSTVFDAYLKNGDYDLGIKKLL--------EMKRDGVEPDHQVWTCFIR 1138
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 48/111 (43%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E G++P I + + L+ Y Q +A ++ ++ + + Y+++ G
Sbjct: 1051 MKEDGIEPTIATMHILMTSYGTAGQPHEAENVLNSLKSSSLEVSTLPYSTVFDAYLKNGD 1110
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGL 111
D L EMK G PD + IR + ++ DA L+ + + G
Sbjct: 1111 YDLGIKKLLEMKRDGVEPDHQVWTCFIRAASLCEQTADAILLLKSLQDCGF 1161
>gi|147843358|emb|CAN80524.1| hypothetical protein VITISV_030537 [Vitis vinifera]
Length = 714
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 110/218 (50%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ PD ++YN LI+ +C +V++A KI+E M+ +P+V +Y++++ G G+ ++A+
Sbjct: 311 ILPDALTYNALINGFCHGXKVDRALKIMEFMKKNGCNPNVFNYSALMNGFCKEGRLEEAK 370
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+V EMK G PD Y I +C A R+ +A L+ +M E + T+N+
Sbjct: 371 EVFDEMKSLGLKPDTVGYTTLINFFCRAGRVDEAMELLKDMXENKCRADTVTFNVILGGL 430
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ + R+ G N S ++ R+ +++ A QL M+ +G +
Sbjct: 431 CREGRFEEAXGMLERLPYEGVYLNKASYRIVLNSLCREGELQKATQLVGLMLGRGVLPHF 490
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
S+ L LC+ GK+ +A + L ++E G KP S+
Sbjct: 491 ATSNELLVHLCEAGKVGDAVMALLGLLELGFKPEPNSW 528
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 107/205 (52%), Gaps = 2/205 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G P++ +Y+ L++ +CK+ ++E+A ++ ++M+ + PD + YT++I G+
Sbjct: 341 MKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDEMKSLGLKPDTVGYTTLINFFCRAGR 400
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A ++LK+M E C D +N + C R +A G+++ + +G+ N +Y +
Sbjct: 401 VDEAMELLKDMXENKCRADTVTFNVILGGLCREGRFEEAXGMLERLPYEGVYLNKASYRI 460
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPN-TQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+L+ + L M+G G LP+ S LV LC+ KV A+ ++E
Sbjct: 461 VLNSLCREGELQKATQLVGLMLGRGVLPHFATSNELLVHLCE-AGKVGDAVMALLGLLEL 519
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEA 204
GF +L +L+C KL+ A
Sbjct: 520 GFKPEPNSWALLVELICRERKLLPA 544
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 81/170 (47%), Gaps = 2/170 (1%)
Query: 59 GQPDKARDVLKEMKE-YGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKG-LSPNAT 116
G D A +V++EMK+ + YP+ Y+ I C + RL++A L +EMV K + P+A
Sbjct: 257 GDIDSAFEVVEEMKKSHVSYPNLITYSTLINGLCGSGRLKEAIELFEEMVSKDQILPDAL 316
Query: 117 TYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDM 176
TYN F + + + M GC PN + L+ ++ ++E A +++++M
Sbjct: 317 TYNALINGFCHGXKVDRALKIMEFMKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDEM 376
Query: 177 VEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G + L + C G++ EA + +M E + V+F I
Sbjct: 377 KSLGLKPDTVGYTTLINFFCRAGRVDEAMELLKDMXENKCRADTVTFNVI 426
>gi|115489040|ref|NP_001067007.1| Os12g0557800 [Oryza sativa Japonica Group]
gi|113649514|dbj|BAF30026.1| Os12g0557800 [Oryza sativa Japonica Group]
Length = 682
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 116/236 (49%), Gaps = 2/236 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ ++SYN +ID + K V+KA +IV++M+D+ P+++++ ++I G +G A
Sbjct: 414 GLLSSVMSYNMVIDCFVKAGAVDKAEEIVKEMQDKGFLPNLVTFNTLISGYSKLGNVHNA 473
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ VLK + E+G PD + + I C +L DA +EM E G+ PNA TYN+
Sbjct: 474 KVVLKMLMEHGFMPDIITFTSLIDGLCNTHQLDDAFVCFEEMAEWGVRPNAQTYNVLMHT 533
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + + +L +M G P+ S L+ R KV+ A ++NDMV G
Sbjct: 534 LCSAGHVNKAIDLLNKMKIDGVTPDAYSFNALILSFCRMRKVDKAEDIFNDMVRFGVVPD 593
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS--QVSFRRIKALMELANKQEA 238
+ L LCD ++ +A++ G S Q + + AL ++ EA
Sbjct: 594 SYTYNSLIKALCDERRVNKAKEILFARERSGCSTSNNQSYWPIVAALAKMGQFSEA 649
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 90/172 (52%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G P++V++N LI Y K V A +++ + + PD+I++TS+I GL Q
Sbjct: 445 MQDKGFLPNLVTFNTLISGYSKLGNVHNAKVVLKMLMEHGFMPDIITFTSLIDGLCNTHQ 504
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A +EM E+G P+A YN + C A + A L+++M G++P+A ++N
Sbjct: 505 LDDAFVCFEEMAEWGVRPNAQTYNVLMHTLCSAGHVNKAIDLLNKMKIDGVTPDAYSFNA 564
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQL 172
F + + +++ M+ G +P++ + L+K + +V A ++
Sbjct: 565 LILSFCRMRKVDKAEDIFNDMVRFGVVPDSYTYNSLIKALCDERRVNKAKEI 616
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 57/103 (55%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E GV+P+ +YN L+ C V KA ++ KM+ + ++PD S+ ++I + +
Sbjct: 515 MAEWGVRPNAQTYNVLMHTLCSAGHVNKAIDLLNKMKIDGVTPDAYSFNALILSFCRMRK 574
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLM 103
DKA D+ +M +G PD+ YN+ I+ C +R+ A ++
Sbjct: 575 VDKAEDIFNDMVRFGVVPDSYTYNSLIKALCDERRVNKAKEIL 617
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 108/270 (40%), Gaps = 36/270 (13%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G +PD +YN L+ C+ V++A ++V +M E I P+V +YT ++ G G+ ++A
Sbjct: 204 GCRPDHFTYNSLVHGVCRRGIVDEAVRLVRQMEGEGIRPNVFTYTMLVDGFCNAGRVEEA 263
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRN---------------------------------YC 91
+L +MKE G P A Y + YC
Sbjct: 264 FRMLDKMKEKGVAPSEATYRTLVHGVFRCLERDKAYRMLSDWLGHETSLHPSACHTMLYC 323
Query: 92 IAKR--LRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPN 149
++K+ ++A M +G ++T + + ++ L + G P
Sbjct: 324 LSKKDMAKEAVEFEKRMSARGYLLDSTAFGIVMSCALKCLEVSDLCELLDSFIKNGGNPG 383
Query: 150 TQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFL 209
+ ++K + A MV KG S ++ +++ D G + +AE+
Sbjct: 384 FDVYIMVIKSLLNCKNFSKANHYLGHMVLKGLLSSVMSYNMVIDCFVKAGAVDKAEEIVK 443
Query: 210 EMIEKGHKPSQVSFRR-IKALMELANKQEA 238
EM +KG P+ V+F I +L N A
Sbjct: 444 EMQDKGFLPNLVTFNTLISGYSKLGNVHNA 473
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 92/226 (40%), Gaps = 1/226 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G P Y +I + KA + M + + V+SY +I G DKA
Sbjct: 379 GGNPGFDVYIMVIKSLLNCKNFSKANHYLGHMVLKGLLSSVMSYNMVIDCFVKAGAVDKA 438
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+++KEM++ G P+ +N I Y + +A ++ ++E G P+ T+
Sbjct: 439 EEIVKEMQDKGFLPNLVTFNTLISGYSKLGNVHNAKVVLKMLMEHGFMPDIITFTSLIDG 498
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
++ L ++ + M G PN Q+ L+ V A+ L N M G
Sbjct: 499 LCNTHQLDDAFVCFEEMAEWGVRPNAQTYNVLMHTLCSAGHVNKAIDLLNKMKIDGVTPD 558
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKAL 229
+ L C M K+ +AE F +M+ G P ++ IKAL
Sbjct: 559 AYSFNALILSFCRMRKVDKAEDIFNDMVRFGVVPDSYTYNSLIKAL 604
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/252 (20%), Positives = 107/252 (42%), Gaps = 29/252 (11%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G++P Y AY ++M + PD +Y S++ G+ G
Sbjct: 179 MPRLGLRPSTAVYT--------------AYLRFQQMPADGCRPDHFTYNSLVHGVCRRGI 224
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A ++++M+ G P+ Y + +C A R+ +A ++D+M EKG++P+ TY
Sbjct: 225 VDEAVRLVRQMEGEGIRPNVFTYTMLVDGFCNAGRVEEAFRMLDKMKEKGVAPSEATYRT 284
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + ++ + +G + +C ++ +++ + A++ M +G
Sbjct: 285 LVHGVFRCLERDKAYRMLSDWLGHETSLHPSACHTMLYCLSKKDMAKEAVEFEKRMSARG 344
Query: 181 FGSYILVSDVLFDLL-------CDMGKLVEAEKSFLEMIEKGHKPS-QVSFRRIKALMEL 232
+ L+ F ++ ++ L E SF I+ G P V IK+L+
Sbjct: 345 Y----LLDSTAFGIVMSCALKCLEVSDLCELLDSF---IKNGGNPGFDVYIMVIKSLLNC 397
Query: 233 ANKQEALQNLSN 244
N +A L +
Sbjct: 398 KNFSKANHYLGH 409
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 77/185 (41%)
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
++L + G P Y I++ K A+ + MV KGL + +YN+ F
Sbjct: 370 ELLDSFIKNGGNPGFDVYIMVIKSLLNCKNFSKANHYLGHMVLKGLLSSVMSYNMVIDCF 429
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ + + + M G LPN + L+ + V A + ++E GF I
Sbjct: 430 VKAGAVDKAEEIVKEMQDKGFLPNLVTFNTLISGYSKLGNVHNAKVVLKMLMEHGFMPDI 489
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNK 245
+ L D LC+ +L +A F EM E G +P+ ++ + + A +L NK
Sbjct: 490 ITFTSLIDGLCNTHQLDDAFVCFEEMAEWGVRPNAQTYNVLMHTLCSAGHVNKAIDLLNK 549
Query: 246 MALFG 250
M + G
Sbjct: 550 MKIDG 554
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/260 (20%), Positives = 98/260 (37%), Gaps = 2/260 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G D ++ ++ K +V ++++ +P Y +I L
Sbjct: 340 MSARGYLLDSTAFGIVMSCALKCLEVSDLCELLDSFIKNGGNPGFDVYIMVIKSLLNCKN 399
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA L M G +YN I + A + A ++ EM +KG PN T+N
Sbjct: 400 FSKANHYLGHMVLKGLLSSVMSYNMVIDCFVKAGAVDKAEEIVKEMQDKGFLPNLVTFNT 459
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ ++ + +M G +P+ + L+ +++ A + +M E G
Sbjct: 460 LISGYSKLGNVHNAKVVLKMLMEHGFMPDIITFTSLIDGLCNTHQLDDAFVCFEEMAEWG 519
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+VL LC G + +A +M G P SF + K + +
Sbjct: 520 VRPNAQTYNVLMHTLCSAGHVNKAIDLLNKMKIDGVTPDAYSFNALILSFCRMRKVDKAE 579
Query: 241 NLSNKMALFGPSMIPKREEY 260
++ N M FG ++P Y
Sbjct: 580 DIFNDMVRFG--VVPDSYTY 597
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 75/177 (42%), Gaps = 14/177 (7%)
Query: 50 SIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEK 109
+++G L G + ++ E++ GC A + ++ R A + +M
Sbjct: 123 ALVGALWRRGPVVLSGRLVAEVRGCGCEVSEELVCALVESWGRLGLARYAHEVFVQMPRL 182
Query: 110 GLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIA 169
GL P+ Y + R + +M GC P+ + LV R+ V+ A
Sbjct: 183 GLRPSTAVYTAYLR--------------FQQMPADGCRPDHFTYNSLVHGVCRRGIVDEA 228
Query: 170 LQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++L M +G + +L D C+ G++ EA + +M EKG PS+ ++R +
Sbjct: 229 VRLVRQMEGEGIRPNVFTYTMLVDGFCNAGRVEEAFRMLDKMKEKGVAPSEATYRTL 285
>gi|356566887|ref|XP_003551657.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Glycine max]
Length = 525
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 108/214 (50%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
V+PD+ ++N L+D CK V +A + M + PDV+S +++ G L G +A+
Sbjct: 263 VRPDVYTFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAK 322
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+V M E G P+ +Y+ I YC K + +A L+ EM ++ L P+ TYN
Sbjct: 323 EVFDRMVERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGL 382
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
S + W+L M +G P+ + L+ ++E ++ AL L+ +V+ G I
Sbjct: 383 SKSGRVLYEWDLVEAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNI 442
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
++L D LC G++ A++ F + KG +P+
Sbjct: 443 RTYNILIDGLCKGGRMKAAKEIFQLLSVKGCRPN 476
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 97/181 (53%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G P+++SY+ LI+ YCK + V++A +++ +M ++ PD ++Y ++ GL G+
Sbjct: 328 MVERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGR 387
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+++ M+ G PD YN + +Y + L A L +V+ G+SPN TYN+
Sbjct: 388 VLYEWDLVEAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNI 447
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++++ ++ + GC PN ++ ++ +R+ ++ A L +MV+ G
Sbjct: 448 LIDGLCKGGRMKAAKEIFQLLSVKGCRPNIRTYNIMINGLRREGLLDEAEALLLEMVDDG 507
Query: 181 F 181
F
Sbjct: 508 F 508
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 119/232 (51%), Gaps = 1/232 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G++PD+VS N L++ +C + +A ++ ++M + P+VISY+++I G V
Sbjct: 293 MIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVISYSTLINGYCKVKM 352
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A +L EM + PD YN + + R+ L++ M G +P+ TYN+
Sbjct: 353 VDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLVEAMRASGQAPDLITYNV 412
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L + L+ ++ TG PN ++ L+ + +++ A +++ + KG
Sbjct: 413 LLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDGLCKGGRMKAAKEIFQLLSVKG 472
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALME 231
I +++ + L G L EAE LEM++ G P+ V+F ++AL+E
Sbjct: 473 CRPNIRTYNIMINGLRREGLLDEAEALLLEMVDDGFPPNAVTFDPLVRALLE 524
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 103/221 (46%), Gaps = 3/221 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G D V Y LI+ CK + A +++ KM + P++I Y ++ GL G +A
Sbjct: 156 GFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTEA 215
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEK-GLSPNATTYNLFFR 123
+ EM G D YN+ I +C A + + A L++EMV K + P+ T+N+
Sbjct: 216 CGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVD 275
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFG 182
+ + N++ M+ G P+ SC L+ C R E A ++++ MVE+G
Sbjct: 276 ALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSE-AKEVFDRMVERGKL 334
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ L + C + + EA + EM ++ P V++
Sbjct: 335 PNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTY 375
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 113/245 (46%), Gaps = 6/245 (2%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
R GV P + L+ C + +A + + + S D + Y ++I GL +G+
Sbjct: 120 RGFGVDP--FTLTTLMKGLCLKGRTFEALNLYDHAVSKGFSFDEVCYGTLINGLCKMGKT 177
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
A ++L++M++ G P+ YN + C + +A GL EMV KG+ + TYN
Sbjct: 178 RDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTEACGLCSEMVGKGICIDVFTYNSL 237
Query: 122 FRVFYWSNDLRSSWNLYCRM-MGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEK 179
F + + + L M M P+ + LV LCK E A ++ M+++
Sbjct: 238 IHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDALCKLGMVAE-ARNVFGLMIKR 296
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEA 238
G ++ + L + C G + EA++ F M+E+G P+ +S+ I ++ EA
Sbjct: 297 GLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVISYSTLINGYCKVKMVDEA 356
Query: 239 LQNLS 243
L+ L+
Sbjct: 357 LRLLT 361
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 96/217 (44%), Gaps = 1/217 (0%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
KP +V+ + I+ Q+ A+ ++ K+ D + T+++ GL L G+ +A +
Sbjct: 88 KPSLVTLSIFINSLTHLGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALN 147
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
+ G D Y I C + RDA L+ +M + G+ PN YN+
Sbjct: 148 LYDHAVSKGFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLC 207
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK-GFGSYI 185
+ + L M+G G + + L+ + + A++L N+MV K +
Sbjct: 208 KEGLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDV 267
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
++L D LC +G + EA F MI++G +P VS
Sbjct: 268 YTFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVS 304
>gi|242087579|ref|XP_002439622.1| hypothetical protein SORBIDRAFT_09g017100 [Sorghum bicolor]
gi|241944907|gb|EES18052.1| hypothetical protein SORBIDRAFT_09g017100 [Sorghum bicolor]
Length = 657
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 120/253 (47%), Gaps = 5/253 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+KPD+V +N +I+ + ++ +A K+ E M+ + P+V +YT +I G+
Sbjct: 359 MLEKGMKPDVVVHNTMIEGLLRGQRRPEALKMFELMKAKGPPPNVWTYTMLIRDHCKRGK 418
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A + +EM+E C PD A Y + Y AKR+ + +++EM +KG P+A TYN
Sbjct: 419 MDMAMECFEEMQEARCQPDVATYTCLLVGYGNAKRMDRVTAVLEEMTQKGCPPDARTYNA 478
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK---LCKRQEKVEIALQLWNDMV 177
++ + +Y +M+ G P + ++K L R + A +W +M
Sbjct: 479 LIKLLTNRKMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFLGDRNYAMGCA--VWEEMH 536
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQE 237
+G + V + G+ EA K EMI KG Q+ + + A A K +
Sbjct: 537 RRGICPDVNSYTVFINGHIRHGRPEEAYKYIEEMINKGMTAPQIDYNKFAADFSKAGKPD 596
Query: 238 ALQNLSNKMALFG 250
L L+ K+ G
Sbjct: 597 ILYELALKVKFAG 609
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 99/222 (44%), Gaps = 7/222 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G + S+NCL+ + +A ++ +KM + SPD+ SYT+++
Sbjct: 290 MKKNGFDDGVESFNCLLVALANEGLGREARQVFDKMHGQ-YSPDLRSYTALMLAWCNARN 348
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A V EM E G PD +N I +R +A + + M KG PN TY +
Sbjct: 349 LVEAGRVWNEMLEKGMKPDVVVHNTMIEGLLRGQRRPEALKMFELMKAKGPPPNVWTYTM 408
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPN--TQSCMFL-VKLCKRQEKVEIALQLWNDMV 177
R + + + M C P+ T +C+ + KR ++V L+ +M
Sbjct: 409 LIRDHCKRGKMDMAMECFEEMQEARCQPDVATYTCLLVGYGNAKRMDRVTAVLE---EMT 465
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
+KG + L LL + +A + + +MI+KG +P+
Sbjct: 466 QKGCPPDARTYNALIKLLTNRKMPDDAARIYKKMIKKGLEPT 507
>gi|242047600|ref|XP_002461546.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
gi|241924923|gb|EER98067.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
Length = 532
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 121/249 (48%), Gaps = 6/249 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ P++V+ N +ID CK + ++KA ++++M DE I P+ +Y S+I G GQ
Sbjct: 147 MLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQ 206
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A +LKEM G P+ YN I C + +A + + M++ G P+ATTY
Sbjct: 207 WTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFNSMIQSGPKPDATTYGS 266
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKL---CKRQEKVEIALQLWNDMV 177
+ +L N+ M+ G N + F +++ CK E +L M
Sbjct: 267 LLHGYATEGNLVEMNNVKDLMVQNGMRSNHHT--FSIEIYAYCKCGRLDEASLTFIK-MQ 323
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQE 237
+ GF I+ + D LC +G+L +A F +MI+ G P+ ++F + + K E
Sbjct: 324 QLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWE 383
Query: 238 ALQNLSNKM 246
+ L +M
Sbjct: 384 KAEELFYEM 392
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 104/219 (47%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD+VSY+ +I + K+ V KAY + KM D I P+V++ S+I GL V DKA V
Sbjct: 119 PDVVSYSTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAV 178
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L++M + P+ YN+ I Y + + +A ++ EM G PN TYN+
Sbjct: 179 LQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCK 238
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
S + ++ M+ +G P+ + L+ + + + + MV+ G S
Sbjct: 239 SGFHAEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHT 298
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ C G+L EA +F++M + G P V++ +
Sbjct: 299 FSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTV 337
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 111/250 (44%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G +P++V+YN LID CK +A +I M PD +Y S++ G G
Sbjct: 217 MSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFNSMIQSGPKPDATTYGSLLHGYATEGN 276
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ +V M + G + ++ I YC RL +AS +M + G P+ TY
Sbjct: 277 LVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTT 336
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
L + + +C+M+ G PN + L+ K E A +L+ +M+++G
Sbjct: 337 VIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRG 396
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ + + D L GK+ EA+K F M G KP+ VS+ + +A + +
Sbjct: 397 IPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVM 456
Query: 241 NLSNKMALFG 250
L + M L G
Sbjct: 457 KLLDDMLLIG 466
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 106/226 (46%), Gaps = 4/226 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDE--DISPDVISYTSIIGGLGLV 58
M E+G PD+ SY+ L+ C +++ E+A +++ M ++ + PDV+SY+++I G
Sbjct: 75 MPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVIHGFFKE 134
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
G KA + +M ++G P+ N+ I C + + A ++ +M+++ + PN TTY
Sbjct: 135 GDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTY 194
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMV 177
N + S + + M G PN + L+ LCK E A +++N M+
Sbjct: 195 NSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAE-AREIFNSMI 253
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ G L G LVE M++ G + + +F
Sbjct: 254 QSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTF 299
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 100/222 (45%), Gaps = 16/222 (7%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+++G PDIV+Y +ID CK +++ A +M D+ +SP++I++T++I G + G+
Sbjct: 322 MQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGK 381
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA ++ EM + G PD + A I ++ +A L D M G PN +YN
Sbjct: 382 WEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNT 441
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++ + ++ L M+ G P + L + MV G
Sbjct: 442 MIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFN----------------TLLDGMVSMG 485
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
+ L D C+ G++ + F EM+ K K ++
Sbjct: 486 LKPDVDTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTIT 527
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 109/256 (42%), Gaps = 38/256 (14%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
V PDI ++ LI C + + + ++ + D +++T ++ L + A
Sbjct: 9 VAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSDAM 68
Query: 66 D-VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKG--LSPNATTYNLFF 122
+ VL+ M E GC PD +Y+ ++ C K+ +A+ L+ M E G P+ +Y+
Sbjct: 69 NIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVI 128
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQ--EKVEIALQ-------- 171
F+ D+ ++ L+C+M+ G PN +C ++ LCK Q +K E LQ
Sbjct: 129 HGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIM 188
Query: 172 ------------------------LWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKS 207
+ +M G ++ ++L D LC G EA +
Sbjct: 189 PNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREI 248
Query: 208 FLEMIEKGHKPSQVSF 223
F MI+ G KP ++
Sbjct: 249 FNSMIQSGPKPDATTY 264
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 91/199 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G++ + +++ I YCK ++++A KM+ PD+++YT++I GL +G+
Sbjct: 287 MVQNGMRSNHHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGR 346
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A +M + G P+ + I + + + A L EM+++G+ P+ T +
Sbjct: 347 LDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTA 406
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + L+ M G PN S ++ +V ++L +DM+ G
Sbjct: 407 MIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIG 466
Query: 181 FGSYILVSDVLFDLLCDMG 199
+ + L D + MG
Sbjct: 467 LKPTAVTFNTLLDGMVSMG 485
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 58/139 (41%), Gaps = 19/139 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGG---LGL 57
M + G+ PD+ + +ID K+ +V +A K+ + M P+V+SY ++I G G
Sbjct: 392 MMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGE 451
Query: 58 VGQPDKARD----------------VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASG 101
VG+ K D +L M G PD I + C R+ D
Sbjct: 452 VGEVMKLLDDMLLIGLKPTAVTFNTLLDGMVSMGLKPDVDTCKTLIDSCCEDGRIEDILT 511
Query: 102 LMDEMVEKGLSPNATTYNL 120
L EM+ K + T N+
Sbjct: 512 LFREMLGKADKTDTITENI 530
>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 817
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 112/226 (49%), Gaps = 35/226 (15%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G++P+ +++N LID +C ++++KA + V+KM ++ ++P V +Y ++I G G +
Sbjct: 412 MESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCT 471
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+ +L++M+E G P+ +Y + I C ++ +A ++ +M+ +G+ PNA YN+
Sbjct: 472 FDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNM 531
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
SCM KV+ AL+ +++M+
Sbjct: 532 LI---------------------------DGSCMV--------GKVKDALRFFDEMMRSE 556
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ +VL D LC GKL EAE ++ GH P +++ +
Sbjct: 557 ISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSL 602
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 115/227 (50%), Gaps = 2/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ GV+P++ YN LI C+++++ A K+ ++M + ++ +++Y ++I G VG+
Sbjct: 202 MRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGE 261
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A + + MKE P+ +N+ + C +++++A L+ EM G P+ TY++
Sbjct: 262 LDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSI 321
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGC-LPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
F +D + LY + G + N + L LCK Q KVE A ++ E
Sbjct: 322 LFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCK-QGKVEKAEEILKKFTEN 380
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G + ++ + + C +G + +A + M G +P+ ++F +
Sbjct: 381 GLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSL 427
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 114/258 (44%), Gaps = 2/258 (0%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ P +V+YN LID CK ++ +A + ++ SPDVI+Y S+I G G K
Sbjct: 557 ISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCL 616
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+ + MK G P Y+ I C + + L +EM++ L P+ YN +
Sbjct: 617 GLYETMKNLGIKPTVRTYHPLISG-CSKEGIELVEKLYNEMLQMNLLPDRVVYNAMIHCY 675
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ + +++L+ M+ G P+ + L+ R+ K+ L N+M K
Sbjct: 676 AEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKELAPKA 735
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNK 245
D+L CD+ A + EM+E P+ + A +E + + +Q + ++
Sbjct: 736 DTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNASICNELTAGLEQEGRLQEVQVICSE 795
Query: 246 MALFG-PSMIPKREEYLA 262
M + G + P +EE A
Sbjct: 796 MNVKGIINHWPSKEEISA 813
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 109/258 (42%), Gaps = 43/258 (16%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGL----- 55
M+E V P+I+++N L+ CK R++++A ++++M PD +Y+ + GL
Sbjct: 272 MKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDD 331
Query: 56 ----------------------------GLV--GQPDKARDVLKEMKEYGCYPDAAAYNA 85
GL G+ +KA ++LK+ E G D YN
Sbjct: 332 GNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNT 391
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
+ YC + A ++ M GL PN+ T+N F ++ + +M G
Sbjct: 392 FVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKG 451
Query: 146 CLPNTQSCMFLV----KLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKL 201
P+ ++ L+ KLC + Q+ M E G ++ L + LC GK+
Sbjct: 452 VTPSVETYNTLIDGYGKLC----TFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKI 507
Query: 202 VEAEKSFLEMIEKGHKPS 219
+EAE +MI +G P+
Sbjct: 508 LEAEIVLRDMICRGVLPN 525
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 86/181 (47%), Gaps = 1/181 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ +G+KP + +Y+ LI C +E K+ +M ++ PD + Y ++I +G
Sbjct: 622 MKNLGIKPTVRTYHPLIS-GCSKEGIELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGN 680
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA + + M + G +PD YN+ I + +L + L++ M K L+P A TY++
Sbjct: 681 TQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKELAPKADTYDI 740
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ D ++ Y M+ LPN C L +++ +++ + ++M KG
Sbjct: 741 LVKGHCDLKDFSGAYVWYREMVENNFLPNASICNELTAGLEQEGRLQEVQVICSEMNVKG 800
Query: 181 F 181
Sbjct: 801 I 801
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 88/219 (40%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G + D Y I K + ++ + ++ MR + P+V Y +IGGL + A
Sbjct: 171 GFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDA 230
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ EM YN I YC L A + + M EK ++PN T+N
Sbjct: 231 EKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSG 290
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
++ + +L M G +P+ + L R + A++L+ EKG
Sbjct: 291 LCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRIN 350
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+L + LC GK+ +AE+ + E G +V +
Sbjct: 351 NYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIY 389
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 74/180 (41%), Gaps = 4/180 (2%)
Query: 23 DRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAA 82
++Q K + ++ + D Y I + + L M++ G P+
Sbjct: 154 EKQFVKVVDLFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFI 213
Query: 83 YNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMM 142
YN I C KR+RDA + DEM L + TYN + +L +++ + RM
Sbjct: 214 YNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMK 273
Query: 143 GTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFD--LLCDMG 199
PN + L+ LCK + K++ A L +M GF +LFD L CD G
Sbjct: 274 EKSVAPNIITFNSLLSGLCKMR-KMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDG 332
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 89/209 (42%), Gaps = 2/209 (0%)
Query: 16 LIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYG 75
L+ V CK + + +A ++ E MR + P ++S + + L Q K D+ E++ G
Sbjct: 112 LLSVCCKSKMLREAVELYEFMRRDGKLPSLVSLSLLFSCLVNEKQFVKVVDLFMEIENSG 171
Query: 76 CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSW 135
D Y AI+ + L+ +D M ++G+ PN YN+ +R +
Sbjct: 172 FRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAE 231
Query: 136 NLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDL 194
++ M + + + L+ CK E ++ A ++ M EK I+ + L
Sbjct: 232 KMFDEMCNINLVGSIVTYNTLIDGYCKVGE-LDAAFKMRERMKEKSVAPNIITFNSLLSG 290
Query: 195 LCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
LC M K+ EA EM G P ++
Sbjct: 291 LCKMRKMKEARSLLKEMEVNGFMPDGYTY 319
>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
Length = 833
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 114/241 (47%), Gaps = 1/241 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ PD V+YN L+D +CK+ Q+ A+ I M + PD ++T++I GL +G+ ++A
Sbjct: 369 GLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQA 428
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+L M + G D + A I +C + +D L + MVE A T+N F
Sbjct: 429 NGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDA 488
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
L + + +MM G +P+ + L++ R + ++L++ M + G
Sbjct: 489 LGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPN 548
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEALQNLS 243
+ ++ + LC+ G++ EAE M G P+ ++ +KA ++ A Q +S
Sbjct: 549 VYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVS 608
Query: 244 N 244
Sbjct: 609 T 609
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 111/238 (46%), Gaps = 1/238 (0%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
+E +P+ V+Y+ LI C+ ++E+A+++ ++M ++ P +YT +I +G
Sbjct: 191 KEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMT 250
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
DKA +L EM C P+ Y I C ++ +A+G+ +M++ GL P T+N
Sbjct: 251 DKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNAL 310
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
+ + S++ L M C PN ++ L++ R K A L +V+ G
Sbjct: 311 INGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGL 370
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEA 238
+ ++L D C G+L A F M G +P +F I L +L ++A
Sbjct: 371 LPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQA 428
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 103/223 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G +P +Y LI C +KA K++++M + P+V +YT +I L G+
Sbjct: 225 MVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGK 284
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A V ++M ++G P +NA I YC + A L+ M + PN TYN
Sbjct: 285 IEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNE 344
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ L R++ G LP+ + LV ++ ++ +A ++N M G
Sbjct: 345 LMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAG 404
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
L D LC +G+L +A M++KG +V+F
Sbjct: 405 LEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTF 447
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 115/226 (50%), Gaps = 11/226 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ P +V++ LI+ +C+ + + K++E+M+ SP+V +YT II GL G+
Sbjct: 505 MMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGR 564
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A +L M +G P+ Y ++ + A RL A ++ MV+ G PN+ Y+
Sbjct: 565 VEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSA 624
Query: 121 FFRVFYWSND------LRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWN 174
F SN L S+ +L R + + N +C L R V+ AL++ +
Sbjct: 625 LLSGFVLSNTAIGARALSSTGDLDARSLSSE--ENDNNC--LSSHVFRLMDVDHALKIRD 680
Query: 175 DMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQ 220
++ + G + L + ++ LC G+++EA++ +M++ G P +
Sbjct: 681 EIKKCGVPTEDLYNFLVVG-LCKEGRIIEADQLTQDMVKHGLFPDK 725
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 101/217 (46%), Gaps = 5/217 (2%)
Query: 1 MREMGVK---PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGL 57
+ EM K P++ +Y LID C++ ++E+A + KM + P +I++ ++I G
Sbjct: 257 LDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCK 316
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
G A +L M++ C P+ YN + C + A L+ +V+ GL P+ T
Sbjct: 317 EGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVT 376
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDM 176
YN+ F L ++N++ M G P+ + L+ LCK ++E A + M
Sbjct: 377 YNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLG-RLEQANGILGSM 435
Query: 177 VEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIE 213
V+KG + L D C +GK + F M+E
Sbjct: 436 VKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVE 472
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 70/140 (50%)
Query: 12 SYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEM 71
++NC +D KD ++ +A ++ KM + P V+++T +I G G+ + +L+ M
Sbjct: 481 TFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERM 540
Query: 72 KEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDL 131
K+ GC P+ Y I C R+ +A ++ M G+SPN TY + + + L
Sbjct: 541 KQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRL 600
Query: 132 RSSWNLYCRMMGTGCLPNTQ 151
++ + M+ GC PN+
Sbjct: 601 DRAFQIVSTMVKNGCQPNSH 620
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 99/223 (44%), Gaps = 6/223 (2%)
Query: 11 VSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKE 70
+ Y +++ CK+ V+ A K+ D TS++ +A V ++
Sbjct: 129 IDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEK 188
Query: 71 M-KEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSN 129
M KE C P++ Y+ I C A RL +A L EMVEKG P+ TY + +
Sbjct: 189 MSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIG 248
Query: 130 DLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSD 189
+ + M C+PN + L+ R+ K+E A ++ M++ G I+ +
Sbjct: 249 MTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFN 308
Query: 190 VLFDLLCDMGKLVEAEKSFLEMIEKGH-KPSQVSFRRIKALME 231
L + C G +V A + L ++EKG+ KP + R LME
Sbjct: 309 ALINGYCKEGWVVSAFQ-LLSVMEKGNCKP---NIRTYNELME 347
>gi|356518400|ref|XP_003527867.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Glycine max]
Length = 546
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 114/248 (45%), Gaps = 36/248 (14%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDED-ISPDVISYTSIIGGLGLVGQPDKARD 66
P++V+Y+ L+D C++ +V++A+ + E+M D I PD ++Y +I G G+PD+AR+
Sbjct: 267 PNLVTYSTLMDGLCRNGRVKEAFDLFEEMVSRDHIVPDPLTYNVLINGFCRGGKPDRARN 326
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
V++ MK GCYP+ Y+A + C +L DA G++ E+ GL P+A TY
Sbjct: 327 VIQFMKSNGCYPNVYNYSALVDGLCKVGKLEDAKGVLAEIKGSGLKPDAVTYTSLINFLC 386
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIAL---------------- 170
+ + L M GC ++ + L+ R+ K E AL
Sbjct: 387 RNGKSDEAIELLEEMKENGCQADSVTFNVLLGGLCREGKFEEALDMVEKLPQQGVYLNKG 446
Query: 171 -------------------QLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEM 211
+L M+ +GF + S+ L LC G + +A + ++
Sbjct: 447 SYRIVLNSLTQKCELKRAKELLGLMLRRGFQPHYATSNELLVCLCKAGMVDDAAVALFDL 506
Query: 212 IEKGHKPS 219
+E G +P
Sbjct: 507 VEMGFQPG 514
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 108/203 (53%), Gaps = 2/203 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G P++ +Y+ L+D CK ++E A ++ +++ + PD ++YTS+I L G+
Sbjct: 331 MKSNGCYPNVYNYSALVDGLCKVGKLEDAKGVLAEIKGSGLKPDAVTYTSLINFLCRNGK 390
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A ++L+EMKE GC D+ +N + C + +A +++++ ++G+ N +Y +
Sbjct: 391 SDEAIELLEEMKENGCQADSVTFNVLLGGLCREGKFEEALDMVEKLPQQGVYLNKGSYRI 450
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPN-TQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+L+ + L M+ G P+ S LV LCK + A+ L+ D+VE
Sbjct: 451 VLNSLTQKCELKRAKELLGLMLRRGFQPHYATSNELLVCLCKAGMVDDAAVALF-DLVEM 509
Query: 180 GFGSYILVSDVLFDLLCDMGKLV 202
GF + +VL L+C KL+
Sbjct: 510 GFQPGLETWEVLIGLICRERKLL 532
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 107/215 (49%), Gaps = 6/215 (2%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDIS-PDVISYTSIIGGLGLVGQ 60
R++ KP++ +N L+ +CK+ ++ A++IVE+MR+ + S P++++Y++++ GL G+
Sbjct: 225 RDLTRKPNVCVFNILVKYHCKNGDLDSAFEIVEEMRNSEFSYPNLVTYSTLMDGLCRNGR 284
Query: 61 PDKARDVLKEM-KEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+A D+ +EM PD YN I +C + A ++ M G PN Y+
Sbjct: 285 VKEAFDLFEEMVSRDHIVPDPLTYNVLINGFCRGGKPDRARNVIQFMKSNGCYPNVYNYS 344
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
L + + + G+G P+ + L+ R K + A++L +M E
Sbjct: 345 ALVDGLCKVGKLEDAKGVLAEIKGSGLKPDAVTYTSLINFLCRNGKSDEAIELLEEMKEN 404
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEK 214
G + + +VL LC GK EA L+M+EK
Sbjct: 405 GCQADSVTFNVLLGGLCREGKFEEA----LDMVEK 435
>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63070, mitochondrial; Flags: Precursor
gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 590
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 111/224 (49%), Gaps = 1/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+KPD+ +YN LI C + A +++ M +++I+PD++ + ++I G+
Sbjct: 276 METKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGK 335
Query: 61 PDKARDVLKEM-KEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+A + EM K C+PD AYN I+ +C KR+ + + EM ++GL N TY
Sbjct: 336 LVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYT 395
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
F+ + D ++ ++ +M+ G P+ + L+ VE AL ++ M ++
Sbjct: 396 TLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKR 455
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I+ + + LC GK+ + F + KG KP+ V++
Sbjct: 456 DMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTY 499
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 115/242 (47%), Gaps = 2/242 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++G P IV+ N L++ +C ++ +A +V++M + PD +++T+++ GL +
Sbjct: 136 MMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNK 195
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A +++ M GC PD Y A I C A L+++M + + + YN
Sbjct: 196 ASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNT 255
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ +++L+ +M G P+ + L+ + A +L +DM+EK
Sbjct: 256 IIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKN 315
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGH-KPSQVSFRR-IKALMELANKQEA 238
++ + L D GKLVEAEK + EM++ H P V++ IK + +E
Sbjct: 316 INPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEG 375
Query: 239 LQ 240
++
Sbjct: 376 ME 377
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 102/217 (47%), Gaps = 2/217 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P IV ++ L+ K + + + E+M++ IS ++ +Y+ I Q A +
Sbjct: 73 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAI 132
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L +M + G P N+ + +C R+ +A L+D+MVE G P+ T+ +
Sbjct: 133 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 192
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYIL 186
N + L RM+ GC P+ + ++ LCKR E ++AL L N M + + ++
Sbjct: 193 HNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP-DLALNLLNKMEKGKIEADVV 251
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + + D LC + +A F +M KG KP ++
Sbjct: 252 IYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTY 288
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 66/141 (46%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV PDI++YN L+D C + VE A + E M+ D+ D+++YT++I L G+ +
Sbjct: 421 GVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDG 480
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
D+ + G P+ Y + +C +A L EM E G PN+ TYN R
Sbjct: 481 WDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRA 540
Query: 125 FYWSNDLRSSWNLYCRMMGTG 145
D +S L M G
Sbjct: 541 RLRDGDEAASAELIKEMRSCG 561
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 82/174 (47%), Gaps = 2/174 (1%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD+V+YN LI +CK ++VE+ ++ +M + + ++YT++I G D A+ V
Sbjct: 354 PDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 413
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
K+M G +PD YN + C + A + + M ++ + + TY
Sbjct: 414 FKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCK 473
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + W+L+C + G PN + + C++ K E A L+ +M E G
Sbjct: 474 AGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEE-ADALFVEMKEDG 526
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 99/227 (43%), Gaps = 2/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ +G+ ++ +Y+ I+ +C+ Q+ A I+ KM P +++ S++ G +
Sbjct: 101 MQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNR 160
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++ +M E G PD + + + +A L++ MV KG P+ TY
Sbjct: 161 ISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGA 220
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+ + NL +M + ++ LCK + ++ A L+N M K
Sbjct: 221 VINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKH-MDDAFDLFNKMETK 279
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G + + L LC+ G+ +A + +M+EK P V F +
Sbjct: 280 GIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNAL 326
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 71/131 (54%), Gaps = 10/131 (7%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ +K DIV+Y +I+ CK +VE + + + + + P+V++YT+++ G G
Sbjct: 452 MQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGL 511
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRD-----ASGLMDEMVEKGLSPNA 115
++A + EMKE G P++ YN IR RLRD ++ L+ EM G + +A
Sbjct: 512 KEEADALFVEMKEDGPLPNSGTYNTLIR-----ARLRDGDEAASAELIKEMRSCGFAGDA 566
Query: 116 TTYNLFFRVFY 126
+T+ L + +
Sbjct: 567 STFGLVTNMLH 577
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 67/156 (42%)
Query: 95 RLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCM 154
+L DA GL +MV+ P+ ++ N +L +M G N +
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 155 FLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEK 214
+ R+ ++ +AL + M++ G+G I+ + L + C ++ EA +M+E
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 215 GHKPSQVSFRRIKALMELANKQEALQNLSNKMALFG 250
G++P V+F + + NK L +M + G
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG 210
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 83/209 (39%), Gaps = 12/209 (5%)
Query: 39 EDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRD 98
E++S V+ + +GL G K+R +P ++ + +
Sbjct: 44 ENLSRKVLQDLKLDDAIGLFGDMVKSRP----------FPSIVEFSKLLSAIAKMNKFDL 93
Query: 99 ASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK 158
L ++M G+S N TY++F F + L + + +MM G P+ + L+
Sbjct: 94 VISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLN 153
Query: 159 LCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
++ A+ L + MVE G+ + L L K EA M+ KG +P
Sbjct: 154 GFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQP 213
Query: 219 SQVSFRR-IKALMELANKQEALQNLSNKM 246
V++ I L + AL NL NKM
Sbjct: 214 DLVTYGAVINGLCKRGEPDLAL-NLLNKM 241
>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
Length = 581
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 106/223 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P++V++N +ID CK + +A++I ++ + + PD +++ +I G G
Sbjct: 319 MASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGN 378
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A + +EM PD + A I C A ++ A ++D M G+ PN TYN+
Sbjct: 379 FEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNV 438
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
S + M+ +GC+P + + LV R + + ALQL + + G
Sbjct: 439 LVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFG 498
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + ++L D L GK +A EM+ KGH+P +F
Sbjct: 499 WDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTF 541
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 123/247 (49%), Gaps = 2/247 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G P++V+YN L++ CK ++E+A+ ++E M D+ ++PDVI+Y+ ++ + D+A
Sbjct: 253 GYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEA 312
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++L M GC P+ +N+ I C + R +A + ++ + L P+ T+N+
Sbjct: 313 LELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAG 372
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + + L+ M+ P+ + L+ + +VE A + + M G
Sbjct: 373 ACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPN 432
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLS 243
++ +VL LC G++ E + EM+ G P +++ + AL + +ALQ L
Sbjct: 433 VVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQ-LV 491
Query: 244 NKMALFG 250
+K+ FG
Sbjct: 492 SKLKSFG 498
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 108/226 (47%), Gaps = 6/226 (2%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PD+V+YN LID CK +E+A ++ M P+V++Y+ +I GL VG+ D+A
Sbjct: 111 GHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEA 170
Query: 65 RDVLKEMKEYGC--YPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGL--SPNATTYNL 120
R++++EM C P+ YN+ + C +A LM + + L SP+ T++
Sbjct: 171 RELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFST 230
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ N M+ G +PN + LV + +K+E A + MV+KG
Sbjct: 231 LIDGLCKCGQTDEACND--DMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKG 288
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ VL D C ++ EA + M +G P+ V+F I
Sbjct: 289 VTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSI 334
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 97/219 (44%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD V++N LI CK E+A + E+M +++ PDV+++ ++I GL GQ + ARD+
Sbjct: 361 PDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDI 420
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L M G P+ YN + C + R+ + ++EMV G P + TY
Sbjct: 421 LDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCR 480
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
++ + L ++ G P+T + LV + K E A+ + +MV KG
Sbjct: 481 ASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFT 540
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
F L G L + ++ KG P + I
Sbjct: 541 FAACFGGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSI 579
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 114/249 (45%), Gaps = 11/249 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV P IV+YN +I+ CK ++ ++ E++ PDV++Y ++I L G
Sbjct: 72 MARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVKRGHHPDVVTYNTLIDSLCKAGD 131
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKG--LSPNATTY 118
++AR + M GC P+ Y+ I C R+ +A L+ EM K + PN TY
Sbjct: 132 LEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITY 191
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCL---PNTQSCMFLVK-LCKRQEKVEIALQLWN 174
N F + + L R + G L P+T + L+ LCK + E +
Sbjct: 192 NSFLDGLCKQSMTAEACELM-RSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDE---ACND 247
Query: 175 DMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELA 233
DM+ G+ ++ + L + LC K+ A M++KG P +++ + A + +
Sbjct: 248 DMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKAS 307
Query: 234 NKQEALQNL 242
EAL+ L
Sbjct: 308 RVDEALELL 316
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 79/153 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +GV P++V+YN L+ CK ++E+ + +E+M P+ ++Y S++ L +
Sbjct: 424 MGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASR 483
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A ++ ++K +G PD YN + + + A +++EMV KG P++ T+
Sbjct: 484 TDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAA 543
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSC 153
F + S +L + L ++ G LP+ +C
Sbjct: 544 CFGGLHRSGNLAGTMELLRVVLAKGMLPDATTC 576
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 108/246 (43%), Gaps = 15/246 (6%)
Query: 10 IVSYNCLIDVYCKDRQVEKAYKIVE-KMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
+ YN ++ C+ + +A +I +M + ++P +++Y +II GL + ++
Sbjct: 45 VADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELF 104
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
+E+ + G +PD YN I + C A L +A L M +G PN TY++
Sbjct: 105 EELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKV 164
Query: 129 NDLRSSWNLYCRMMGTGC--LPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ + L M C LPN + FL LCK+ E A +L + + GS
Sbjct: 165 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAE-ACELMRSLRD---GSLR 220
Query: 186 LVSD-----VLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ D L D LC G+ EA +MI G+ P+ V++ + + A+K E
Sbjct: 221 VSPDTVTFSTLIDGLCKCGQTDEACND--DMIAGGYVPNVVTYNALVNGLCKADKMERAH 278
Query: 241 NLSNKM 246
+ M
Sbjct: 279 AMIESM 284
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 69/166 (41%), Gaps = 3/166 (1%)
Query: 42 SPDVISYTSIIGGLGLVGQPDKARDVLK-EMKEYGCYPDAAAYNAAIRNYCIAKRLRDAS 100
S V Y ++ L G+ +A ++ + EM G P YN I C + L
Sbjct: 42 SRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGM 101
Query: 101 GLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLC 160
L +E+V++G P+ TYN + DL + L+ M GC+PN + L+
Sbjct: 102 ELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGL 161
Query: 161 KRQEKVEIALQLWNDMVEKGFGSY--ILVSDVLFDLLCDMGKLVEA 204
+ +++ A +L +M K I+ + D LC EA
Sbjct: 162 CKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEA 207
>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
Length = 692
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 102/200 (51%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
D V++N L+D +C++ V++ +++E+M + PDVI+YT++I G G D+A +L
Sbjct: 403 DDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLL 462
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
K M GC P+ +Y ++ C A+R DA LM +M+++G N T+N
Sbjct: 463 KSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKK 522
Query: 129 NDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVS 188
+ + L +M+ GC P+ S ++ + K + AL+L N MV KG ++
Sbjct: 523 GLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIY 582
Query: 189 DVLFDLLCDMGKLVEAEKSF 208
+ L G++ + + F
Sbjct: 583 SSIASALSREGRINKVIQMF 602
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 109/226 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M M P+IV++N LI C++ E+ ++++ +M + +PD+ Y +II G+ G
Sbjct: 290 MVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGH 349
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A ++L M YG P+ YN ++ C A+R + L+ EM +K + T+N+
Sbjct: 350 LEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNI 409
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + + L +M+ GC+P+ + ++ ++ ++ A+ L M G
Sbjct: 410 LVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACG 469
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ ++ LC + V+AE +MI++G + ++F +
Sbjct: 470 CKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTL 515
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 99/223 (44%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P Y+ +++ C+ A +++E + + DV + ++ + G
Sbjct: 185 MPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGS 244
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A +L+++ +GC PD +YNA ++ C+AKR LM+EMV PN T+N
Sbjct: 245 VDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNT 304
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + +M+ GC P+ + ++ ++ +E+A ++ N M G
Sbjct: 305 LISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYG 364
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + L LC + E E+ EM +K V+F
Sbjct: 365 LKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTF 407
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 116/252 (46%), Gaps = 4/252 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G PD+++Y +I+ +CK+ +++A +++ M P+ ISYT ++ GL +
Sbjct: 430 MLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAER 489
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A D++ +M + GC + +N I C + A L+ +M+ G SP+ +Y+
Sbjct: 490 WVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYST 549
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + L M+ G PNT + R+ ++ +Q+++++ +
Sbjct: 550 VIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTT 609
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF----RRIKALMELANKQ 236
S ++ + + LC G+ A + M+ G P++ ++ R + + + Q
Sbjct: 610 IRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQ 669
Query: 237 EALQNLSNKMAL 248
E L L +K AL
Sbjct: 670 EMLTELCSKGAL 681
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 94/226 (41%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+ G D+ + N +++ C V++A ++ + PDV+SY +++ GL + +
Sbjct: 220 LHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKR 279
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+++++EM C P+ +N I C ++ +MVE G +P+ Y
Sbjct: 280 WGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYAT 339
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
L + + RM G PN L+K E+ E +L +M +K
Sbjct: 340 IIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKD 399
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ ++L D C G + + +M+E G P +++ +
Sbjct: 400 CPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTV 445
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 97/241 (40%), Gaps = 9/241 (3%)
Query: 13 YNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMK 72
YN ++ YC+ Q+E A ++ + + P+ +Y ++ L G+ A VL EM
Sbjct: 130 YNAMVAGYCRAGQLESARRLAAAV---PVPPNAYTYFPVVRALCARGRIADALAVLDEMP 186
Query: 73 EYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLR 132
GC P Y+ + C R A +++++ +G + + NL +
Sbjct: 187 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 246
Query: 133 SSWNLYCRMMGTGCLPNTQSCMFLVK-LC--KRQEKVEIALQLWNDMVEKGFGSYILVSD 189
+ +L + GC P+ S ++K LC KR V+ +L +MV I+ +
Sbjct: 247 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQ---ELMEEMVRMACPPNIVTFN 303
Query: 190 VLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALF 249
L LC G + +M+E G P + I + E + N+M +
Sbjct: 304 TLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSY 363
Query: 250 G 250
G
Sbjct: 364 G 364
>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
mitochondrial [Vitis vinifera]
Length = 876
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 114/241 (47%), Gaps = 1/241 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ PD V+YN L+D +CK+ Q+ A+ I M + PD ++T++I GL +G+ ++A
Sbjct: 412 GLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQA 471
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+L M + G D + A I +C + +D L + MVE A T+N F
Sbjct: 472 NGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDA 531
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
L + + +MM G +P+ + L++ R + ++L++ M + G
Sbjct: 532 LGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPN 591
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEALQNLS 243
+ ++ + LC+ G++ EAE M G P+ ++ +KA ++ A Q +S
Sbjct: 592 VYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVS 651
Query: 244 N 244
Sbjct: 652 T 652
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 111/238 (46%), Gaps = 1/238 (0%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
+E +P+ V+Y+ LI C+ ++E+A+++ ++M ++ P +YT +I +G
Sbjct: 234 KEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMT 293
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
DKA +L EM C P+ Y I C ++ +A+G+ +M++ GL P T+N
Sbjct: 294 DKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNAL 353
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
+ + S++ L M C PN ++ L++ R K A L +V+ G
Sbjct: 354 INGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGL 413
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEA 238
+ ++L D C G+L A F M G +P +F I L +L ++A
Sbjct: 414 LPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQA 471
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 103/223 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G +P +Y LI C +KA K++++M + P+V +YT +I L G+
Sbjct: 268 MVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGK 327
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A V ++M ++G P +NA I YC + A L+ M + PN TYN
Sbjct: 328 IEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNE 387
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ L R++ G LP+ + LV ++ ++ +A ++N M G
Sbjct: 388 LMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAG 447
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
L D LC +G+L +A M++KG +V+F
Sbjct: 448 LEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTF 490
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 115/226 (50%), Gaps = 11/226 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ P +V++ LI+ +C+ + + K++E+M+ SP+V +YT II GL G+
Sbjct: 548 MMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGR 607
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A +L M +G P+ Y ++ + A RL A ++ MV+ G PN+ Y+
Sbjct: 608 VEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSA 667
Query: 121 FFRVFYWSND------LRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWN 174
F SN L S+ +L R + + N +C L R V+ AL++ +
Sbjct: 668 LLSGFVLSNTAIGARALSSTGDLDARSLSSE--ENDNNC--LSSHVFRLMDVDHALKIRD 723
Query: 175 DMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQ 220
++ + G + L + ++ LC G+++EA++ +M++ G P +
Sbjct: 724 EIKKCGVPTEDLYNFLVVG-LCKEGRIIEADQLTQDMVKHGLFPDK 768
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 101/217 (46%), Gaps = 5/217 (2%)
Query: 1 MREMGVK---PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGL 57
+ EM K P++ +Y LID C++ ++E+A + KM + P +I++ ++I G
Sbjct: 300 LDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCK 359
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
G A +L M++ C P+ YN + C + A L+ +V+ GL P+ T
Sbjct: 360 EGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVT 419
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDM 176
YN+ F L ++N++ M G P+ + L+ LCK ++E A + M
Sbjct: 420 YNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLG-RLEQANGILGSM 478
Query: 177 VEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIE 213
V+KG + L D C +GK + F M+E
Sbjct: 479 VKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVE 515
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 70/140 (50%)
Query: 12 SYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEM 71
++NC +D KD ++ +A ++ KM + P V+++T +I G G+ + +L+ M
Sbjct: 524 TFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERM 583
Query: 72 KEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDL 131
K+ GC P+ Y I C R+ +A ++ M G+SPN TY + + + L
Sbjct: 584 KQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRL 643
Query: 132 RSSWNLYCRMMGTGCLPNTQ 151
++ + M+ GC PN+
Sbjct: 644 DRAFQIVSTMVKNGCQPNSH 663
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 99/223 (44%), Gaps = 6/223 (2%)
Query: 11 VSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKE 70
+ Y +++ CK+ V+ A K+ D TS++ +A V ++
Sbjct: 172 IDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEK 231
Query: 71 M-KEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSN 129
M KE C P++ Y+ I C A RL +A L EMVEKG P+ TY + +
Sbjct: 232 MSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIG 291
Query: 130 DLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSD 189
+ + M C+PN + L+ R+ K+E A ++ M++ G I+ +
Sbjct: 292 MTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFN 351
Query: 190 VLFDLLCDMGKLVEAEKSFLEMIEKGH-KPSQVSFRRIKALME 231
L + C G +V A + L ++EKG+ KP + R LME
Sbjct: 352 ALINGYCKEGWVVSAFQ-LLSVMEKGNCKP---NIRTYNELME 390
>gi|356536611|ref|XP_003536830.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 578
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 112/227 (49%), Gaps = 6/227 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G + DI++YN L++ YC + +V +A K+ M + PD I+YT ++ G L+ +
Sbjct: 274 MIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTILMHGYCLIDK 333
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+AR++ M E G PD +YN I+ YC +R+ +A L+++M K L PN TYN
Sbjct: 334 VDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNLVPNIITYNS 393
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPN---TQSCMFLVKLCKRQEKVEIALQLWNDMV 177
S + +W L M C P T + L LC R E VE A+ + ++
Sbjct: 394 VVDGLCKSGGILDAWKL-VDEMHYCCQPPPDVTTYNILLESLC-RIECVEKAIAFFKHLI 451
Query: 178 -EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
E+ F + ++L C +L EA F M K P V++
Sbjct: 452 FERSFAPNVWSYNILISGCCKNRRLDEAINLFNHMCFKNLVPDIVTY 498
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 111/237 (46%), Gaps = 16/237 (6%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ----- 60
VKP+++ YN ++ CKD + +A + KM + I PD+ +Y+S+I GL GQ
Sbjct: 193 VKPNLIMYNTVVHGLCKDGNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVT 252
Query: 61 -----------PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEK 109
D+AR++ M E G D YN + YC+ ++ +A L MVE+
Sbjct: 253 SLLNGFCLNNKVDEARELFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVER 312
Query: 110 GLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIA 169
G P+ TY + + + + + NL+ M+ G +P+ S L+K + E+V A
Sbjct: 313 GEQPDTITYTILMHGYCLIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEA 372
Query: 170 LQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ L DM K I+ + + D LC G +++A K EM P V+ I
Sbjct: 373 MNLLEDMFLKNLVPNIITYNSVVDGLCKSGGILDAWKLVDEMHYCCQPPPDVTTYNI 429
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 108/221 (48%), Gaps = 4/221 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+ PD+ SYN LI YCK +V +A ++E M +++ P++I+Y S++ GL G
Sbjct: 344 MIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNLVPNIITYNSVVDGLCKSGG 403
Query: 61 PDKARDVLKEMKEYGCYP--DAAAYNAAIRNYCIAKRLRDASGLMDEMV-EKGLSPNATT 117
A ++ EM Y C P D YN + + C + + A ++ E+ +PN +
Sbjct: 404 ILDAWKLVDEM-HYCCQPPPDVTTYNILLESLCRIECVEKAIAFFKHLIFERSFAPNVWS 462
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
YN+ + L + NL+ M +P+ + L+ ++++ A+ L +V
Sbjct: 463 YNILISGCCKNRRLDEAINLFNHMCFKNLVPDIVTYNILLDALFNGQQLDKAIALLVQIV 522
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
++G + ++L + L G+ A+K L + +G+ P
Sbjct: 523 DQGISPNLRTYNILINGLHKGGRPKTAQKISLYLSIRGYHP 563
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 124/265 (46%), Gaps = 19/265 (7%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV P V++N LI+ +C Q++ A+ ++ K+ P+V+++T+++ G + +
Sbjct: 80 MEYKGVVPFTVTFNILINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDK 139
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAK--RLRDASGLMDEMVEKGL-SPNATT 117
A + EM D Y I C +K + R A L+ +M E+ L PN
Sbjct: 140 MLDALYIYDEMVARRIRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIM 199
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCK---RQE--------- 164
YN ++ + L +M+ G P+ + L+ LC+ R+E
Sbjct: 200 YNTVVHGLCKDGNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLNGFC 259
Query: 165 ---KVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQV 221
KV+ A +L+N M+E+G I+ ++L + C K+ EA K F M+E+G +P +
Sbjct: 260 LNNKVDEARELFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTI 319
Query: 222 SFRRIKALMELANKQEALQNLSNKM 246
++ + L +K + +NL + M
Sbjct: 320 TYTILMHGYCLIDKVDEARNLFHGM 344
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 75/155 (48%), Gaps = 2/155 (1%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDE-DISPDVISYTSIIGGLGLVGQPDKARD 66
PD+ +YN L++ C+ VEKA + + E +P+V SY +I G + D+A +
Sbjct: 422 PDVTTYNILLESLCRIECVEKAIAFFKHLIFERSFAPNVWSYNILISGCCKNRRLDEAIN 481
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
+ M PD YN + ++L A L+ ++V++G+SPN TYN+ +
Sbjct: 482 LFNHMCFKNLVPDIVTYNILLDALFNGQQLDKAIALLVQIVDQGISPNLRTYNILINGLH 541
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCK 161
+++ + + G P+ ++ + +LCK
Sbjct: 542 KGGRPKTAQKISLYLSIRGYHPDVKT-YIINELCK 575
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 58/116 (50%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E P++ SYN LI CK+R++++A + M +++ PD+++Y ++ L Q D
Sbjct: 453 ERSFAPNVWSYNILISGCCKNRRLDEAINLFNHMCFKNLVPDIVTYNILLDALFNGQQLD 512
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
KA +L ++ + G P+ YN I R + A + + +G P+ TY
Sbjct: 513 KAIALLVQIVDQGISPNLRTYNILINGLHKGGRPKTAQKISLYLSIRGYHPDVKTY 568
>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
Length = 667
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 124/240 (51%), Gaps = 1/240 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E+G +P +Y ++D C++R+ ++A +++++M ++ ++P V++ T++I G+
Sbjct: 102 MKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGR 161
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A VL+ MK GC P+ YNA ++ +C ++ A L+++M G++P+A TYNL
Sbjct: 162 MSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNL 221
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
R + S++ L M G G + + + L+ + + + A L++ + +G
Sbjct: 222 LIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRG 281
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
+ + L + LC GK A K +M+ G P ++ I+ L ++ QE L
Sbjct: 282 IKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGL 341
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 104/224 (46%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G KP++ +YN L+ +C + +V KA ++ KMR ++PD ++Y +I G + G
Sbjct: 172 MKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGH 231
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A +L+ M+ G D YNA I C R A L D + +G+ PNA T+N
Sbjct: 232 IESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNS 291
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEK 179
S +W +M+ GC P+T + F+ LCK + E L +M++K
Sbjct: 292 LINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQE-GLSFIGEMLQK 350
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ ++ L +++ EM+ G P V++
Sbjct: 351 DVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTY 394
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 99/223 (44%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+ P +V+ +I+ YCK+ ++ A +++E M+ P+V +Y +++ G G+
Sbjct: 137 MFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGK 196
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA +L +M+ G PDA YN IR CI + A L+ M GL + TYN
Sbjct: 197 VHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNA 256
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ +L+ + G PN + L+ + K +IA + MV G
Sbjct: 257 LINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAG 316
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ LC M E EM++K KPS V++
Sbjct: 317 CTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNY 359
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 102/244 (41%), Gaps = 32/244 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G +PD ++N LI YC+ QV+ A + +KM + DV+SY ++I GL G+
Sbjct: 1 MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60
Query: 61 PDKARDV-------------------------------LKEMKEYGCYPDAAAYNAAIRN 89
D+A ++ L+ MKE G P AY A +
Sbjct: 61 IDEAVELFGEMDQPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDF 120
Query: 90 YCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPN 149
C ++ ++A ++ EM EKGL+P T + + + + M GC PN
Sbjct: 121 RCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPN 180
Query: 150 TQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFL 209
+ LV+ + KV A+ L N M G + ++L C G +E+ L
Sbjct: 181 VWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGH-IESAFRLL 239
Query: 210 EMIE 213
++E
Sbjct: 240 RLME 243
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 96/228 (42%), Gaps = 41/228 (17%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSII----------GG 54
G+KP+ V++N LI+ CK + + A+K +EKM +PD +Y+S I G
Sbjct: 281 GIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEG 340
Query: 55 LGLVG---QPD----------------KARD------VLKEMKEYGCYPDAAAYNAAIRN 89
L +G Q D K R+ EM GC PD Y ++R
Sbjct: 341 LSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRA 400
Query: 90 YCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPN 149
YCI RL +A ++ EM + G++ + YN + ++ +M +PN
Sbjct: 401 YCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPN 460
Query: 150 TQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDV--LFDLL 195
+ L++ R VE L L G I ++DV LFD++
Sbjct: 461 QFTYFILLRHLVRMRLVEDVLPL----TPAGVWKAIELTDVFGLFDVM 504
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 97/243 (39%), Gaps = 17/243 (6%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + VKP V+Y +I K+R + +M +PDV++YT+ + + G+
Sbjct: 347 MLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGR 406
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A +VL EM + G D AYN + + + A ++ +M PN TY +
Sbjct: 407 LNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFI 466
Query: 121 FFRVF----------------YW-SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQ 163
R W + +L + L+ M LPN+ + +++
Sbjct: 467 LLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSED 526
Query: 164 EKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ E A L + M E + L C + ++A MI+ G P +S+
Sbjct: 527 GRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSY 586
Query: 224 RRI 226
+ +
Sbjct: 587 QHL 589
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/278 (20%), Positives = 107/278 (38%), Gaps = 58/278 (20%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD+V+Y + YC + ++ +A ++ +M ++ D ++Y +++ G +GQ
Sbjct: 382 MVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQ 441
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYC-----------------IAKRLRDASGLM 103
D A +LK+M P+ Y +R+ A L D GL
Sbjct: 442 TDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLF 501
Query: 104 DEMVEKGLSPNATTYNLFFRVFYWSNDLRS------------------------------ 133
D M + PN+ TY+ F S D R+
Sbjct: 502 DVMKKNEFLPNSGTYSSILEGF--SEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFC 559
Query: 134 -------SWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+W L C M+ G +P S L+ + + + A +++ + K + +
Sbjct: 560 KSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEI 619
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGH-KPSQVSF 223
V V+ D L G + + + M+E+ + +PS ++
Sbjct: 620 VWKVIIDGLIKKGH-SDISREMIIMLERMNCRPSHQTY 656
>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
Length = 514
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 128/298 (42%), Gaps = 46/298 (15%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+ P++++YNC+ID YC + A +++ M + +I PDV++++++I G+
Sbjct: 106 MHEKGIFPNVLTYNCMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGK 165
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A ++ +EM +P Y++ I +C RL DA + D MV KG SP+ T N
Sbjct: 166 VSGAEELYREMLRRNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNT 225
Query: 121 FF-----------RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSC-MFLVKLCK------- 161
F ++ + +L+ M+ G P+ +C L LC+
Sbjct: 226 LIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKA 285
Query: 162 ---------------------------RQEKVEIALQLWNDMVEKGFGSYILVSDVLFDL 194
+ KV+ A L+N + G + ++ ++L +
Sbjct: 286 LEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGV 345
Query: 195 LCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFGPS 252
G + AE +LEM+ KG PS V++ + N+ E + + + M G S
Sbjct: 346 FVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCS 403
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 116/252 (46%), Gaps = 12/252 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G +PD V+Y +++ CK A ++ KM + I +V+ Y++I+ L G
Sbjct: 36 MVEEGHQPDAVTYGTIVNGMCKLGDTVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGN 95
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA+++ EM E G +P+ YN I YC + DA L+ +M+E+ + P+ T++
Sbjct: 96 HIKAQNIFTEMHEKGIFPNVLTYNCMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSA 155
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + + LY M+ P T + ++ + ++E A +++ MV KG
Sbjct: 156 LINAFVKEGKVSGAEELYREMLRRNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKG 215
Query: 181 FGSYILVSDVLFD-----------LLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKA- 228
I+ + L D C +G + A+ F EMI G P V+ + A
Sbjct: 216 CSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAG 275
Query: 229 LMELANKQEALQ 240
L E ++AL+
Sbjct: 276 LCENGKLEKALE 287
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 112/239 (46%), Gaps = 2/239 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV PDIV+ N L+ C++ ++EKA ++ + + + D + II G+ + D+A
Sbjct: 261 GVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEA 320
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
D+ + G D YN I + A + EM+ KG+ P+ TYN
Sbjct: 321 WDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDG 380
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
F N L + + M+ GC P+ + L+K + +V+ L+L+++M ++G +
Sbjct: 381 FCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVAD 440
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLS 243
+ + L C +G L A+ F EM+ G P ++FR + L L K E + L+
Sbjct: 441 TITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSM--LAGLCTKAELQKGLT 497
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 111/237 (46%), Gaps = 11/237 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQ-----------VEKAYKIVEKMRDEDISPDVISYT 49
M G PDI++ N LID C+ ++ V A + ++M +SPD+++
Sbjct: 211 MVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCN 270
Query: 50 SIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEK 109
+++ GL G+ +KA ++ K ++ D A N I C ++ +A L + +
Sbjct: 271 TLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVN 330
Query: 110 GLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIA 169
G+ + TYN+ VF + + ++Y M+ G +P+T + +V +Q ++E A
Sbjct: 331 GVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEA 390
Query: 170 LQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
Q+ + MV +G ++ L C G++ + + F EM ++G +++ +
Sbjct: 391 RQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNAL 447
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 104/226 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G ++V++ L++ C++ +V +A +V++M +E PD ++Y +I+ G+ +G
Sbjct: 1 MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A ++L++M E + Y+A + C A + EM EKG+ PN TYN
Sbjct: 61 TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNC 120
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + L M+ P+ + L+ ++ KV A +L+ +M+ +
Sbjct: 121 MIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRN 180
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + D C +L +A+ F M+ KG P ++ +
Sbjct: 181 IFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTL 226
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 53/102 (51%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PD+V+++ LI YCK +V+ ++ +M + D I+Y ++I G VG + A
Sbjct: 401 GCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGA 460
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEM 106
+D+ +EM G PD + + + C L+ +++++
Sbjct: 461 QDIFEEMVSSGVCPDTITFRSMLAGLCTKAELQKGLTMLEDL 502
Score = 43.5 bits (101), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ D ++YN LI +CK + A I E+M + PD I++ S++ GL +
Sbjct: 432 MCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTKAE 491
Query: 61 PDKARDVLKEMKE 73
K +L+++++
Sbjct: 492 LQKGLTMLEDLQK 504
>gi|125537003|gb|EAY83491.1| hypothetical protein OsI_38705 [Oryza sativa Indica Group]
Length = 696
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 116/236 (49%), Gaps = 2/236 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ ++SYN +ID + K V+KA +IV++M+D+ P+++++ ++I G +G A
Sbjct: 428 GLLSSVMSYNMVIDCFVKAGAVDKAEEIVKEMQDKGFLPNLVTFNTLISGYSKLGNVHNA 487
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ VLK + E+G PD + + I C +L DA +EM E G+ PNA TYN+
Sbjct: 488 KVVLKMLMEHGFMPDIITFTSLIDGLCNTHQLDDAFVCFEEMAEWGVRPNAQTYNVLMHT 547
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + + +L +M G P+ S L+ R KV+ A ++NDMV G
Sbjct: 548 LCSAGHVNKAIDLLNKMKIDGVTPDAYSFNALILSFCRMRKVDKAEDIFNDMVRFGVVPD 607
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS--QVSFRRIKALMELANKQEA 238
+ L LCD ++ +A++ G S Q + + AL ++ EA
Sbjct: 608 SYTYNSLIKALCDERRVNKAKEILFARERSGCSTSNNQSYWPIVAALAKMGQFSEA 663
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 90/172 (52%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G P++V++N LI Y K V A +++ + + PD+I++TS+I GL Q
Sbjct: 459 MQDKGFLPNLVTFNTLISGYSKLGNVHNAKVVLKMLMEHGFMPDIITFTSLIDGLCNTHQ 518
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A +EM E+G P+A YN + C A + A L+++M G++P+A ++N
Sbjct: 519 LDDAFVCFEEMAEWGVRPNAQTYNVLMHTLCSAGHVNKAIDLLNKMKIDGVTPDAYSFNA 578
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQL 172
F + + +++ M+ G +P++ + L+K + +V A ++
Sbjct: 579 LILSFCRMRKVDKAEDIFNDMVRFGVVPDSYTYNSLIKALCDERRVNKAKEI 630
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 113/252 (44%), Gaps = 15/252 (5%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G++P YN LI + V+ AY ++M + PD +Y S++ G+ G
Sbjct: 179 MPRLGLRPSTAVYNALIAASVRAGAVDTAYLRFQQMPADGCRPDRFTYNSLVHGVCRRGI 238
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A ++++M+ G P+ Y + +C A R+ +A ++D+M EKG++P+ TY
Sbjct: 239 VDEAVRLVRQMEGEGIRPNVFTYTMLVDGFCNAGRVEEAFRMLDKMKEKGVAPSEATYRT 298
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + ++ + +G + +C ++ +++ + A++ M +G
Sbjct: 299 LVHGVFRCLERDKAYRMLSDWLGHETSLHPSACHTMLYCLSKKDMAKEAVEFAKRMSARG 358
Query: 181 FGSYILVSDVLFDLL-------CDMGKLVEAEKSFLEMIEKGHKPS-QVSFRRIKALMEL 232
+ L+ F ++ ++ L E SF I+ G P V IK+L+
Sbjct: 359 Y----LLDSTAFGIVMSCSLKCLEVSDLCELLDSF---IKNGGNPGFDVYIMVIKSLLNC 411
Query: 233 ANKQEALQNLSN 244
N +A L +
Sbjct: 412 KNFSKANHYLGH 423
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 57/103 (55%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E GV+P+ +YN L+ C V KA ++ KM+ + ++PD S+ ++I + +
Sbjct: 529 MAEWGVRPNAQTYNVLMHTLCSAGHVNKAIDLLNKMKIDGVTPDAYSFNALILSFCRMRK 588
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLM 103
DKA D+ +M +G PD+ YN+ I+ C +R+ A ++
Sbjct: 589 VDKAEDIFNDMVRFGVVPDSYTYNSLIKALCDERRVNKAKEIL 631
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 92/226 (40%), Gaps = 1/226 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G P Y +I + KA + M + + V+SY +I G DKA
Sbjct: 393 GGNPGFDVYIMVIKSLLNCKNFSKANHYLGHMVLKGLLSSVMSYNMVIDCFVKAGAVDKA 452
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+++KEM++ G P+ +N I Y + +A ++ ++E G P+ T+
Sbjct: 453 EEIVKEMQDKGFLPNLVTFNTLISGYSKLGNVHNAKVVLKMLMEHGFMPDIITFTSLIDG 512
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
++ L ++ + M G PN Q+ L+ V A+ L N M G
Sbjct: 513 LCNTHQLDDAFVCFEEMAEWGVRPNAQTYNVLMHTLCSAGHVNKAIDLLNKMKIDGVTPD 572
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKAL 229
+ L C M K+ +AE F +M+ G P ++ IKAL
Sbjct: 573 AYSFNALILSFCRMRKVDKAEDIFNDMVRFGVVPDSYTYNSLIKAL 618
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 79/177 (44%)
Query: 50 SIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEK 109
+++G L G + ++ E++ GC A + ++ R A + +M
Sbjct: 123 ALVGALWRRGPVVLSGRLVAEVRGCGCEVSEELVCALVESWGRLGLARYAHEVFVQMPRL 182
Query: 110 GLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIA 169
GL P+ YN + + +++ + +M GC P+ + LV R+ V+ A
Sbjct: 183 GLRPSTAVYNALIAASVRAGAVDTAYLRFQQMPADGCRPDRFTYNSLVHGVCRRGIVDEA 242
Query: 170 LQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++L M +G + +L D C+ G++ EA + +M EKG PS+ ++R +
Sbjct: 243 VRLVRQMEGEGIRPNVFTYTMLVDGFCNAGRVEEAFRMLDKMKEKGVAPSEATYRTL 299
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 77/185 (41%)
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
++L + G P Y I++ K A+ + MV KGL + +YN+ F
Sbjct: 384 ELLDSFIKNGGNPGFDVYIMVIKSLLNCKNFSKANHYLGHMVLKGLLSSVMSYNMVIDCF 443
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ + + + M G LPN + L+ + V A + ++E GF I
Sbjct: 444 VKAGAVDKAEEIVKEMQDKGFLPNLVTFNTLISGYSKLGNVHNAKVVLKMLMEHGFMPDI 503
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNK 245
+ L D LC+ +L +A F EM E G +P+ ++ + + A +L NK
Sbjct: 504 ITFTSLIDGLCNTHQLDDAFVCFEEMAEWGVRPNAQTYNVLMHTLCSAGHVNKAIDLLNK 563
Query: 246 MALFG 250
M + G
Sbjct: 564 MKIDG 568
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 62/148 (41%), Gaps = 3/148 (2%)
Query: 29 AYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIR 88
A+++ +M + P Y ++I G D A ++M GC PD YN+ +
Sbjct: 172 AHEVFVQMPRLGLRPSTAVYNALIAASVRAGAVDTAYLRFQQMPADGCRPDRFTYNSLVH 231
Query: 89 NYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLP 148
C + +A L+ +M +G+ PN TY + F + + ++ + +M G P
Sbjct: 232 GVCRRGIVDEAVRLVRQMEGEGIRPNVFTYTMLVDGFCNAGRVEEAFRMLDKMKEKGVAP 291
Query: 149 NTQSCMFLVK---LCKRQEKVEIALQLW 173
+ + LV C ++K L W
Sbjct: 292 SEATYRTLVHGVFRCLERDKAYRMLSDW 319
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/260 (20%), Positives = 98/260 (37%), Gaps = 2/260 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G D ++ ++ K +V ++++ +P Y +I L
Sbjct: 354 MSARGYLLDSTAFGIVMSCSLKCLEVSDLCELLDSFIKNGGNPGFDVYIMVIKSLLNCKN 413
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA L M G +YN I + A + A ++ EM +KG PN T+N
Sbjct: 414 FSKANHYLGHMVLKGLLSSVMSYNMVIDCFVKAGAVDKAEEIVKEMQDKGFLPNLVTFNT 473
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ ++ + +M G +P+ + L+ +++ A + +M E G
Sbjct: 474 LISGYSKLGNVHNAKVVLKMLMEHGFMPDIITFTSLIDGLCNTHQLDDAFVCFEEMAEWG 533
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+VL LC G + +A +M G P SF + K + +
Sbjct: 534 VRPNAQTYNVLMHTLCSAGHVNKAIDLLNKMKIDGVTPDAYSFNALILSFCRMRKVDKAE 593
Query: 241 NLSNKMALFGPSMIPKREEY 260
++ N M FG ++P Y
Sbjct: 594 DIFNDMVRFG--VVPDSYTY 611
>gi|77556780|gb|ABA99576.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 696
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 116/236 (49%), Gaps = 2/236 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ ++SYN +ID + K V+KA +IV++M+D+ P+++++ ++I G +G A
Sbjct: 428 GLLSSVMSYNMVIDCFVKAGAVDKAEEIVKEMQDKGFLPNLVTFNTLISGYSKLGNVHNA 487
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ VLK + E+G PD + + I C +L DA +EM E G+ PNA TYN+
Sbjct: 488 KVVLKMLMEHGFMPDIITFTSLIDGLCNTHQLDDAFVCFEEMAEWGVRPNAQTYNVLMHT 547
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + + +L +M G P+ S L+ R KV+ A ++NDMV G
Sbjct: 548 LCSAGHVNKAIDLLNKMKIDGVTPDAYSFNALILSFCRMRKVDKAEDIFNDMVRFGVVPD 607
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS--QVSFRRIKALMELANKQEA 238
+ L LCD ++ +A++ G S Q + + AL ++ EA
Sbjct: 608 SYTYNSLIKALCDERRVNKAKEILFARERSGCSTSNNQSYWPIVAALAKMGQFSEA 663
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 90/172 (52%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G P++V++N LI Y K V A +++ + + PD+I++TS+I GL Q
Sbjct: 459 MQDKGFLPNLVTFNTLISGYSKLGNVHNAKVVLKMLMEHGFMPDIITFTSLIDGLCNTHQ 518
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A +EM E+G P+A YN + C A + A L+++M G++P+A ++N
Sbjct: 519 LDDAFVCFEEMAEWGVRPNAQTYNVLMHTLCSAGHVNKAIDLLNKMKIDGVTPDAYSFNA 578
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQL 172
F + + +++ M+ G +P++ + L+K + +V A ++
Sbjct: 579 LILSFCRMRKVDKAEDIFNDMVRFGVVPDSYTYNSLIKALCDERRVNKAKEI 630
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 113/252 (44%), Gaps = 15/252 (5%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G++P YN LI + V+ AY ++M + PD +Y S++ G+ G
Sbjct: 179 MPRLGLRPSTAVYNALIAASVRAGAVDTAYLRFQQMPADGCRPDHFTYNSLVHGVCRRGI 238
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A ++++M+ G P+ Y + +C A R+ +A ++D+M EKG++P+ TY
Sbjct: 239 VDEAVRLVRQMEGEGIRPNVFTYTMLVDGFCNAGRVEEAFRMLDKMKEKGVAPSEATYRT 298
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + ++ + +G + +C ++ +++ + A++ M +G
Sbjct: 299 LVHGVFRCLERDKAYRMLSDWLGHETSLHPSACHTMLYCLSKKDMAKEAVEFEKRMSARG 358
Query: 181 FGSYILVSDVLFDLL-------CDMGKLVEAEKSFLEMIEKGHKPS-QVSFRRIKALMEL 232
+ L+ F ++ ++ L E SF I+ G P V IK+L+
Sbjct: 359 Y----LLDSTAFGIVMSCALKCLEVSDLCELLDSF---IKNGGNPGFDVYIMVIKSLLNC 411
Query: 233 ANKQEALQNLSN 244
N +A L +
Sbjct: 412 KNFSKANHYLGH 423
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 57/103 (55%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E GV+P+ +YN L+ C V KA ++ KM+ + ++PD S+ ++I + +
Sbjct: 529 MAEWGVRPNAQTYNVLMHTLCSAGHVNKAIDLLNKMKIDGVTPDAYSFNALILSFCRMRK 588
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLM 103
DKA D+ +M +G PD+ YN+ I+ C +R+ A ++
Sbjct: 589 VDKAEDIFNDMVRFGVVPDSYTYNSLIKALCDERRVNKAKEIL 631
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 92/226 (40%), Gaps = 1/226 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G P Y +I + KA + M + + V+SY +I G DKA
Sbjct: 393 GGNPGFDVYIMVIKSLLNCKNFSKANHYLGHMVLKGLLSSVMSYNMVIDCFVKAGAVDKA 452
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+++KEM++ G P+ +N I Y + +A ++ ++E G P+ T+
Sbjct: 453 EEIVKEMQDKGFLPNLVTFNTLISGYSKLGNVHNAKVVLKMLMEHGFMPDIITFTSLIDG 512
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
++ L ++ + M G PN Q+ L+ V A+ L N M G
Sbjct: 513 LCNTHQLDDAFVCFEEMAEWGVRPNAQTYNVLMHTLCSAGHVNKAIDLLNKMKIDGVTPD 572
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKAL 229
+ L C M K+ +AE F +M+ G P ++ IKAL
Sbjct: 573 AYSFNALILSFCRMRKVDKAEDIFNDMVRFGVVPDSYTYNSLIKAL 618
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 79/177 (44%)
Query: 50 SIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEK 109
+++G L G + ++ E++ GC A + ++ R A + +M
Sbjct: 123 ALVGALWRRGPVVLSGRLVAEVRGCGCEVSEELVCALVESWGRLGLARYAHEVFVQMPRL 182
Query: 110 GLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIA 169
GL P+ YN + + +++ + +M GC P+ + LV R+ V+ A
Sbjct: 183 GLRPSTAVYNALIAASVRAGAVDTAYLRFQQMPADGCRPDHFTYNSLVHGVCRRGIVDEA 242
Query: 170 LQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++L M +G + +L D C+ G++ EA + +M EKG PS+ ++R +
Sbjct: 243 VRLVRQMEGEGIRPNVFTYTMLVDGFCNAGRVEEAFRMLDKMKEKGVAPSEATYRTL 299
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 77/185 (41%)
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
++L + G P Y I++ K A+ + MV KGL + +YN+ F
Sbjct: 384 ELLDSFIKNGGNPGFDVYIMVIKSLLNCKNFSKANHYLGHMVLKGLLSSVMSYNMVIDCF 443
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ + + + M G LPN + L+ + V A + ++E GF I
Sbjct: 444 VKAGAVDKAEEIVKEMQDKGFLPNLVTFNTLISGYSKLGNVHNAKVVLKMLMEHGFMPDI 503
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNK 245
+ L D LC+ +L +A F EM E G +P+ ++ + + A +L NK
Sbjct: 504 ITFTSLIDGLCNTHQLDDAFVCFEEMAEWGVRPNAQTYNVLMHTLCSAGHVNKAIDLLNK 563
Query: 246 MALFG 250
M + G
Sbjct: 564 MKIDG 568
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 62/148 (41%), Gaps = 3/148 (2%)
Query: 29 AYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIR 88
A+++ +M + P Y ++I G D A ++M GC PD YN+ +
Sbjct: 172 AHEVFVQMPRLGLRPSTAVYNALIAASVRAGAVDTAYLRFQQMPADGCRPDHFTYNSLVH 231
Query: 89 NYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLP 148
C + +A L+ +M +G+ PN TY + F + + ++ + +M G P
Sbjct: 232 GVCRRGIVDEAVRLVRQMEGEGIRPNVFTYTMLVDGFCNAGRVEEAFRMLDKMKEKGVAP 291
Query: 149 NTQSCMFLVK---LCKRQEKVEIALQLW 173
+ + LV C ++K L W
Sbjct: 292 SEATYRTLVHGVFRCLERDKAYRMLSDW 319
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/260 (20%), Positives = 98/260 (37%), Gaps = 2/260 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G D ++ ++ K +V ++++ +P Y +I L
Sbjct: 354 MSARGYLLDSTAFGIVMSCALKCLEVSDLCELLDSFIKNGGNPGFDVYIMVIKSLLNCKN 413
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA L M G +YN I + A + A ++ EM +KG PN T+N
Sbjct: 414 FSKANHYLGHMVLKGLLSSVMSYNMVIDCFVKAGAVDKAEEIVKEMQDKGFLPNLVTFNT 473
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ ++ + +M G +P+ + L+ +++ A + +M E G
Sbjct: 474 LISGYSKLGNVHNAKVVLKMLMEHGFMPDIITFTSLIDGLCNTHQLDDAFVCFEEMAEWG 533
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+VL LC G + +A +M G P SF + K + +
Sbjct: 534 VRPNAQTYNVLMHTLCSAGHVNKAIDLLNKMKIDGVTPDAYSFNALILSFCRMRKVDKAE 593
Query: 241 NLSNKMALFGPSMIPKREEY 260
++ N M FG ++P Y
Sbjct: 594 DIFNDMVRFG--VVPDSYTY 611
>gi|224096624|ref|XP_002310676.1| predicted protein [Populus trichocarpa]
gi|222853579|gb|EEE91126.1| predicted protein [Populus trichocarpa]
Length = 424
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 115/250 (46%), Gaps = 3/250 (1%)
Query: 1 MREMGVK---PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGL 57
++EMG+ PD+V+ N L+ YC +++K KI M + + PDV SY+ I G
Sbjct: 133 LKEMGLVGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCK 192
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
V + D+A ++ EM G P+A YN I+ C A R RDA L +M GLSP+
Sbjct: 193 VEKIDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILA 252
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
Y+ F +L L+ M P+ ++ R KV+ A ++ + ++
Sbjct: 253 YSTLLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLI 312
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQE 237
+G + L D LC G ++EA + F +M E G P S+ + N
Sbjct: 313 VEGLKPDVHTYTALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQGCLQHNDTS 372
Query: 238 ALQNLSNKMA 247
+ L ++MA
Sbjct: 373 TVVQLIHEMA 382
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 101/222 (45%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+K ++ + + LI+ +C V+ + + K PDV+ +T++I G+ +G+ + A
Sbjct: 70 GIKYNVCTLSILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELA 129
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+LKEM GC PD N+ +R YC ++ + MV KGL P+ +Y++F
Sbjct: 130 AGLLKEMGLVGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFING 189
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + + L+ M G +PN + L+K + + A L+ M G
Sbjct: 190 YCKVEKIDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPD 249
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
IL L D C G L E F EM + KP V + I
Sbjct: 250 ILAYSTLLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTII 291
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 107/214 (50%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G KPD+V + LID C+ + E A ++++M PDV++ S++ G G+ DK
Sbjct: 105 GFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGLVGCVPDVVTCNSLMRGYCSQGKIDKV 164
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
R + M G PD +Y+ I YC +++ +A L DEM +G+ PNA TYN +
Sbjct: 165 RKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEAMELFDEMSHRGVVPNAVTYNTLIKA 224
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ R + L+ +M G P+ + L+ +Q ++ L L+ +M +
Sbjct: 225 LCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGFCKQGNLDEMLVLFQEMQRRLVKPD 284
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
++V ++ + +C K+ +A++ +I +G KP
Sbjct: 285 LVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKP 318
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 105/221 (47%), Gaps = 3/221 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV P+ V+YN LI C+ + A + KM +SPD+++Y++++ G G
Sbjct: 206 MSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGFCKQGN 265
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+ + +EM+ PD Y I C +++++DA ++ ++ +GL P+ TY
Sbjct: 266 LDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKPDVHTYTA 325
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + L+ +M GC+P + S L++ C + +QL ++M ++G
Sbjct: 326 LVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQGCLQHNDTSTVVQLIHEMADRG 385
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQV 221
F + + L D L G A K L + E GH+ +V
Sbjct: 386 FYADAVTRTFLKDFL--PGNDSPAIKQLLGLFE-GHQGVKV 423
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/229 (20%), Positives = 97/229 (42%), Gaps = 2/229 (0%)
Query: 25 QVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYN 84
++ A +M D + P +I + ++ + + + + + KEM+ G + +
Sbjct: 20 NLDDALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTLS 79
Query: 85 AAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGT 144
I +C + + + +++G P+ + + L M
Sbjct: 80 ILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGLV 139
Query: 145 GCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEA 204
GC+P+ +C L++ Q K++ ++++ MV KG + + + C + K+ EA
Sbjct: 140 GCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEA 199
Query: 205 EKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLSNKMALFGPS 252
+ F EM +G P+ V++ IKAL + ++A Q L KM G S
Sbjct: 200 MELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDA-QVLFRKMCACGLS 247
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 66/168 (39%)
Query: 56 GLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNA 115
G G D A M + P +N + + K+ L EM +G+ N
Sbjct: 16 GYFGNLDDALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNV 75
Query: 116 TTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWND 175
T ++ F + + + ++++ + + G P+ L+ R K E+A L +
Sbjct: 76 CTLSILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKE 135
Query: 176 MVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
M G ++ + L C GK+ + K F M+ KG KP S+
Sbjct: 136 MGLVGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSY 183
>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
Length = 602
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 123/295 (41%), Gaps = 37/295 (12%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
+PD+ +YN LI+ +CK +++ A +++++MR +D SPD ++Y +IG L G+ D A
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 214
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR--- 123
VL ++ C P Y I + + +A LMDEM+ +GL P+ TYN R
Sbjct: 215 VLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC 274
Query: 124 -----------------------VFYWSNDLRSSWN---------LYCRMMGTGCLPNTQ 151
V ++ LR+ N L +M C PN
Sbjct: 275 KEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 334
Query: 152 SCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEM 211
+ L+ R K+E A+ L M EKG D L C G+L A + M
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 394
Query: 212 IEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFGPSMIPKREEYLAEMSA 266
I G P V++ + A + K + + K+ G S P Y SA
Sbjct: 395 ISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCS--PNSSSYNTMFSA 447
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 115/240 (47%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P++V+Y+ LI C+D ++E+A +++ M+++ ++PD SY +I G+ D A +
Sbjct: 331 PNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEF 390
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L+ M GC PD YN + C + A + ++ E G SPN+++YN F +
Sbjct: 391 LETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWS 450
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
S D + ++ MM G P+ + ++ R+ V+ A +L DM F ++
Sbjct: 451 SGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVT 510
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMA 247
+++ C ++ +A M+ G +P++ ++ + + A + L+N +
Sbjct: 511 YNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLV 570
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 108/224 (48%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+KPD+ +YN +I CK+ V++A+++V + + PDVISY ++ L G+
Sbjct: 254 MLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGK 313
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++ ++ +M C P+ Y+ I C ++ +A L+ M EKGL+P+A +Y+
Sbjct: 314 WEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDP 373
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPN-TQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
F L + M+ GCLP+ L LCK K + AL+++ + E
Sbjct: 374 LIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCK-NGKADQALEIFGKLGEV 432
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G + +F L G + A LEM+ G P ++++
Sbjct: 433 GCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITY 476
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 105/226 (46%), Gaps = 1/226 (0%)
Query: 21 CKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDA 80
C+ ++ ++E M + +PDVI T +I G + KA V++ ++++G PD
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158
Query: 81 AAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCR 140
AYNA I +C R+ DA+ ++D M K SP+ TYN+ L + + +
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 141 MMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGK 200
++ C P + L++ + V+ AL+L ++M+ +G + + + +C G
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 201 LVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKM 246
+ A + + KG +P +S+ + + K E + L KM
Sbjct: 279 VDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKM 324
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 84/173 (48%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PDIV+YN ++ CK+ + ++A +I K+ + SP+ SY ++ L G +A
Sbjct: 398 GCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRA 457
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++ EM G PD YN+ I C + +A L+ +M P+ TYN+
Sbjct: 458 LHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLG 517
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
F ++ + + N+ M+G GC PN + L++ A++L ND+V
Sbjct: 518 FCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLV 570
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 106/242 (43%), Gaps = 1/242 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD++ LI + R + KA +++E + ++ PDV +Y ++I G + +
Sbjct: 115 MVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEIL-EKFGQPDVFAYNALINGFCKMNR 173
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A VL M+ PD YN I + C +L A ++++++ P TY +
Sbjct: 174 IDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTI 233
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + L M+ G P+ + +++ ++ V+ A ++ ++ KG
Sbjct: 234 LIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKG 293
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
++ ++L L + GK E EK +M + P+ V++ + + K E
Sbjct: 294 SEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAM 353
Query: 241 NL 242
NL
Sbjct: 354 NL 355
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E+G P+ SYN + +A ++ +M I PD I+Y S+I L G D
Sbjct: 431 EVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVD 490
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
+A ++L +M+ +P YN + +C A R+ DA +++ MV G PN TTY +
Sbjct: 491 EAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLI 550
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 55/107 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ PD ++YN +I C++ V++A++++ MR + P V++Y ++ G +
Sbjct: 464 MMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHR 523
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMV 107
+ A +VL+ M GC P+ Y I A +A L +++V
Sbjct: 524 IEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLV 570
>gi|359492929|ref|XP_002283907.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Vitis vinifera]
Length = 513
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 110/218 (50%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ PD ++YN LI+ +C +V++A KI+E M+ +P+V +Y++++ G G+ ++A+
Sbjct: 268 ILPDALTYNALINGFCHGEKVDRALKIMEFMKKNGCNPNVFNYSALMNGFCKEGRLEEAK 327
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+V EMK G PD Y I +C A R+ +A L+ +M E + T+N+
Sbjct: 328 EVFDEMKSLGLKPDTVGYTTLINFFCRAGRVDEAMELLKDMRENKCRADTVTFNVILGGL 387
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ + R+ G N S ++ R+ +++ A QL M+ +G +
Sbjct: 388 CREGRFEEARGMLERLPYEGVYLNKASYRIVLNSLCREGELQKATQLVGLMLGRGVLPHF 447
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
S+ L LC+ GK+ +A + L ++E G KP S+
Sbjct: 448 ATSNELLVHLCEAGKVGDAVMALLGLLELGFKPEPNSW 485
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 108/205 (52%), Gaps = 2/205 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G P++ +Y+ L++ +CK+ ++E+A ++ ++M+ + PD + YT++I G+
Sbjct: 298 MKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDEMKSLGLKPDTVGYTTLINFFCRAGR 357
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A ++LK+M+E C D +N + C R +A G+++ + +G+ N +Y +
Sbjct: 358 VDEAMELLKDMRENKCRADTVTFNVILGGLCREGRFEEARGMLERLPYEGVYLNKASYRI 417
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPN-TQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+L+ + L M+G G LP+ S LV LC+ KV A+ ++E
Sbjct: 418 VLNSLCREGELQKATQLVGLMLGRGVLPHFATSNELLVHLCE-AGKVGDAVMALLGLLEL 476
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEA 204
GF +L +L+C KL+ A
Sbjct: 477 GFKPEPNSWALLVELICRERKLLPA 501
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 115/225 (51%), Gaps = 2/225 (0%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDIS-PDVISYTSIIGGLGLVGQ 60
+ + ++P+ +N L+ +CK+ ++ A+++VE+M+ +S P++I+Y+++I GL G+
Sbjct: 192 KSLNLEPNTCIFNILVKHHCKNGDIDSAFEVVEEMKKSHVSYPNLITYSTLINGLCGSGR 251
Query: 61 PDKARDVLKEM-KEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+A ++ +EM + PDA YNA I +C +++ A +M+ M + G +PN Y+
Sbjct: 252 LKEAIELFEEMVSKDQILPDALTYNALINGFCHGEKVDRALKIMEFMKKNGCNPNVFNYS 311
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
F L + ++ M G P+T L+ R +V+ A++L DM E
Sbjct: 312 ALMNGFCKEGRLEEAKEVFDEMKSLGLKPDTVGYTTLINFFCRAGRVDEAMELLKDMREN 371
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
+ + +V+ LC G+ EA + +G ++ S+R
Sbjct: 372 KCRADTVTFNVILGGLCREGRFEEARGMLERLPYEGVYLNKASYR 416
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 64/137 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MRE + D V++N ++ C++ + E+A ++E++ E + + SY ++ L G+
Sbjct: 368 MRENKCRADTVTFNVILGGLCREGRFEEARGMLERLPYEGVYLNKASYRIVLNSLCREGE 427
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA ++ M G P A N + + C A ++ DA + ++E G P ++ L
Sbjct: 428 LQKATQLVGLMLGRGVLPHFATSNELLVHLCEAGKVGDAVMALLGLLELGFKPEPNSWAL 487
Query: 121 FFRVFYWSNDLRSSWNL 137
+ L ++ L
Sbjct: 488 LVELICRERKLLPAFEL 504
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 81/184 (44%), Gaps = 3/184 (1%)
Query: 43 PDVISYTSIIGGLGLVGQPDKARD-VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASG 101
P + + ++ + L Q D R +L K P+ +N ++++C + A
Sbjct: 162 PSLKAISTCLNLLVESNQVDLTRKFLLNSKKSLNLEPNTCIFNILVKHHCKNGDIDSAFE 221
Query: 102 LMDEMVEKGLS-PNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG-CLPNTQSCMFLVKL 159
+++EM + +S PN TY+ S L+ + L+ M+ LP+ + L+
Sbjct: 222 VVEEMKKSHVSYPNLITYSTLINGLCGSGRLKEAIELFEEMVSKDQILPDALTYNALING 281
Query: 160 CKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
EKV+ AL++ M + G + L + C G+L EA++ F EM G KP
Sbjct: 282 FCHGEKVDRALKIMEFMKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDEMKSLGLKPD 341
Query: 220 QVSF 223
V +
Sbjct: 342 TVGY 345
>gi|356560073|ref|XP_003548320.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
mitochondrial-like [Glycine max]
Length = 466
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 115/260 (44%), Gaps = 3/260 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDIS---PDVISYTSIIGGLGL 57
M E+G +PD +YN ID YCK V +A + E MR + S P +Y II L
Sbjct: 192 MVELGHRPDNFAYNTAIDTYCKAGMVTEAVDLFEFMRTKGSSISSPTAKTYAIIIVALAQ 251
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
+ ++ ++ M GC PD Y I C+ ++ +A ++EM K P+ T
Sbjct: 252 HDRMEECFKLIGHMISSGCLPDVTTYKEIIEGMCVCGKIDEAYKFLEEMGNKSYRPDIVT 311
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
YN F +V + + LY RM+ C+P+ Q+ L+ + + + A + W +M
Sbjct: 312 YNCFLKVLCDNKKSEDALKLYGRMIELNCIPSVQTYNMLISMFFEIDDPDGAFETWQEMD 371
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQE 237
+G I V+ D L + K+ +A E+I KG K F + + +
Sbjct: 372 NRGCRPDIDTYSVMIDGLFNCNKVEDACFLLEEVINKGIKLPYKKFDSFLMQLSVIGDLQ 431
Query: 238 ALQNLSNKMALFGPSMIPKR 257
A+ +S M F + +R
Sbjct: 432 AIHRVSEHMRKFYNHGMARR 451
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 106/221 (47%), Gaps = 4/221 (1%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+P+I ++N L+D CK VE A + +KMR + + P+ +Y + G V P +
Sbjct: 128 TQPEINAFNLLLDALCKCCLVEDAETLYKKMR-KTVKPNAETYNIFVFGWCRVRNPTRGM 186
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKG---LSPNATTYNLFF 122
+L+EM E G PD AYN AI YC A + +A L + M KG SP A TY +
Sbjct: 187 KLLEEMVELGHRPDNFAYNTAIDTYCKAGMVTEAVDLFEFMRTKGSSISSPTAKTYAIII 246
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
+ + + L M+ +GCLP+ + +++ K++ A + +M K +
Sbjct: 247 VALAQHDRMEECFKLIGHMISSGCLPDVTTYKEIIEGMCVCGKIDEAYKFLEEMGNKSYR 306
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I+ + +LCD K +A K + MIE PS ++
Sbjct: 307 PDIVTYNCFLKVLCDNKKSEDALKLYGRMIELNCIPSVQTY 347
>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
Length = 837
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 112/226 (49%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E G P ++YN ++D + K+ ++ A + +M + +SP+V++YTS+I G + D
Sbjct: 562 EEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRID 621
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
A EM+E G D AY+A I +C + + A L E++E GLSPN YN
Sbjct: 622 LALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMI 681
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
F N++ ++ Y +M+ + + L+ ++ ++ A L+ +M+ KG
Sbjct: 682 SGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIV 741
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKA 228
I+ VL + LC+ G+L A K EM K PS + + + A
Sbjct: 742 PDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIA 787
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 112/240 (46%), Gaps = 1/240 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ P++VSYN +I +C+ ++ A + M D+ P+V++Y+ +I G G
Sbjct: 455 MVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGD 514
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA D+ +M P +N I C ++ +A + +E+G P+ TYN
Sbjct: 515 SEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNS 574
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F ++ S+ +Y M G PN + L+ + ++++AL+ ++M EKG
Sbjct: 575 IVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKG 634
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
+ L D C + A+ F E++E G P+++ + I +L N + AL
Sbjct: 635 LELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAAL 694
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 107/228 (46%), Gaps = 8/228 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + + P ++N +I+ CK Q+ +A ++ +E P ++Y SI+ G G
Sbjct: 525 MLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGN 584
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A V +EM E+G P+ Y + I +C + R+ A DEM EKGL + T Y+
Sbjct: 585 IDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSA 644
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIAL----QLWNDM 176
F D+ S+ +L+ ++ G PN ++ + +E AL ++ ND
Sbjct: 645 LIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDR 704
Query: 177 VEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
+ G+Y L D L G+LV A ++EM+ KG P ++F
Sbjct: 705 IPCDLGTYT----TLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFH 748
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 105/223 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E GV P++V+Y LI+ +CK +++ A K ++MR++ + DV +Y+++I G
Sbjct: 595 MCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRD 654
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A+D+ E+ E G P+ YN+ I + + A +M+ + + TY
Sbjct: 655 MESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTT 714
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
L + +LY M+ G +P+ + LV + ++E A ++ +M K
Sbjct: 715 LIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKN 774
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+L+ + L G L EA EM+++G P V++
Sbjct: 775 MTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTY 817
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 104/222 (46%), Gaps = 1/222 (0%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
+E GVK D +Y+ +I CK +++E+M++ P ++TS+I G
Sbjct: 247 KERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNM 306
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
+A + +EM G + + ++ YC L A L +++ E GL PN TY++
Sbjct: 307 VEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVL 366
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
S ++ + LY +M G P+ + L++ + E A +L+++ V+ G
Sbjct: 367 IEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGV 426
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ I +++ LC GK+ EA M+ +G P+ VS+
Sbjct: 427 AN-IFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSY 467
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 110/240 (45%), Gaps = 3/240 (1%)
Query: 7 KP-DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
KP ++V L+ YC ++ A + K+ ++ + P+ ++Y+ +I G G +KA
Sbjct: 321 KPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKAS 380
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
++ +MK G P N+ +R Y A +AS L DE V+ G++ N TYN+
Sbjct: 381 ELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVA-NIFTYNIMMSWL 439
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ + +L M+ G +PN S ++ R+ +++A +++DM+ + +
Sbjct: 440 CKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNV 499
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLSN 244
+ +L D G +A F +M+ P+ +F I L ++ EA L N
Sbjct: 500 VTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKN 559
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 61/114 (53%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
D+ +Y LID K+ ++ A + +M + I PD+I++ ++ GL GQ + AR +L
Sbjct: 708 DLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKIL 767
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
+EM P YN I Y L++A L DEM+++GL P+ TY++
Sbjct: 768 EEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILI 821
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 49/87 (56%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ PDI++++ L++ C Q+E A KI+E+M ++++P V+ Y ++I G G
Sbjct: 735 MLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGN 794
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAI 87
+A + EM + G PD Y+ I
Sbjct: 795 LKEAFTLHDEMLDRGLVPDDVTYDILI 821
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 97/223 (43%), Gaps = 1/223 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E G P ++ +I + +A ++ E+M + +++ TS++ G G
Sbjct: 281 MKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGN 340
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A ++ ++ E G +P+ Y+ I C + + AS L +M G+ P+ N
Sbjct: 341 LDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNS 400
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
R + + + L+ + G + + LCK K++ A L ++MV +G
Sbjct: 401 LLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCK-GGKMDEACSLLDNMVNQG 459
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + + C G + A F +M+ + KP+ V++
Sbjct: 460 MVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTY 502
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 87/214 (40%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
V P + N L+ + + + + KM I D + ++ G+ ++A
Sbjct: 181 VIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAE 240
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+ +E KE G DA AY+ I+ C L++EM E+G P+ T+
Sbjct: 241 EYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVAC 300
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
++ + L M+ G N L+K Q ++ AL L+N + E G
Sbjct: 301 VAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNK 360
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
+ VL + C+ G + +A + + +M G PS
Sbjct: 361 VTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPS 394
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 88/211 (41%)
Query: 13 YNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMK 72
+N L++ Y + ++E A M +D+ P V ++ L + RD+ +M
Sbjct: 153 FNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMV 212
Query: 73 EYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLR 132
G Y D + +R R+ +A E E+G+ +A Y++ + +
Sbjct: 213 LRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSN 272
Query: 133 SSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLF 192
L M G +P+ + ++ C Q + AL+L +M+ G ++V+ L
Sbjct: 273 LGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLM 332
Query: 193 DLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
C G L A F ++ E G P++V++
Sbjct: 333 KGYCAQGNLDSALNLFNKITEDGLFPNKVTY 363
Score = 40.4 bits (93), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 68/163 (41%), Gaps = 1/163 (0%)
Query: 79 DAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLY 138
D +N + Y A R+ +A + M+ + + P N+ N + +LY
Sbjct: 149 DHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLY 208
Query: 139 CRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDM 198
+M+ G + + +V+ C ++ +VE A + + + E+G ++ +C
Sbjct: 209 NKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKK 268
Query: 199 GKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQ 240
+ EM E+G PS+ +F I A + N EAL+
Sbjct: 269 PNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALR 311
>gi|326525088|dbj|BAK07814.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 539
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 126/278 (45%), Gaps = 38/278 (13%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD+V Y L+ +C+ ++KA ++ +M+ I P+V +YTS+I + GQ +A+++
Sbjct: 242 PDVVLYTTLVHAWCRAGCLDKAEQVFAEMQQAGIMPNVYTYTSVIDAMYRAGQVPRAQEL 301
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKR-------------------------------- 95
L +M E GC P+ A +NA +R + A R
Sbjct: 302 LCQMMETGCPPNTATFNAIMRAHVKAGRSEQVLQVHNQMRQLGCDPDIITYNFLMETHCG 361
Query: 96 -----LRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNT 150
L A ++ +M+ KG P+ T+N ++ + ++ ++ LY RM C PN
Sbjct: 362 KGQSNLDAAMKVLAKMIAKGCIPDCHTFNPMLKLVLGTGNVEAARRLYERMQELQCKPNV 421
Query: 151 QSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLE 210
+ L+KL +++ +++ L++ DM +G + L + C G A + E
Sbjct: 422 VTYNLLMKLFNKEKSMDMVLRIKKDMDAQGVEPNVNTYGALIESFCGRGNWRRAHATLRE 481
Query: 211 MI-EKGHKPSQVSFRRIKALMELANKQEALQNLSNKMA 247
M+ EK KP++ + + L+ A + + L MA
Sbjct: 482 MVEEKSLKPTKPVYDMVLMLLRKAGQLRKHEELVELMA 519
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 105/271 (38%), Gaps = 37/271 (13%)
Query: 13 YNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMK 72
Y +ID+ K A ++++MR+ I +II G +A ++ + M+
Sbjct: 142 YAAMIDLLAKHHHFPLARHLLDEMRERSIPVSSQVILAIIRRYVRAGMSPEASELFRRME 201
Query: 73 EYGC-----------------------------------YPDAAAYNAAIRNYCIAKRLR 97
EYG PD Y + +C A L
Sbjct: 202 EYGAGVPDPAVLASLLGALSKKRLAGEAQALFDSYKSVFPPDVVLYTTLVHAWCRAGCLD 261
Query: 98 DASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV 157
A + EM + G+ PN TY Y + + + L C+MM TGC PNT + ++
Sbjct: 262 KAEQVFAEMQQAGIMPNVYTYTSVIDAMYRAGQVPRAQELLCQMMETGCPPNTATFNAIM 321
Query: 158 KLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGK--LVEAEKSFLEMIEKG 215
+ + + E LQ+ N M + G I+ + L + C G+ L A K +MI KG
Sbjct: 322 RAHVKAGRSEQVLQVHNQMRQLGCDPDIITYNFLMETHCGKGQSNLDAAMKVLAKMIAKG 381
Query: 216 HKPSQVSFRRIKALMELANKQEALQNLSNKM 246
P +F + L+ EA + L +M
Sbjct: 382 CIPDCHTFNPMLKLVLGTGNVEAARRLYERM 412
>gi|83744086|gb|ABC42329.1| PPR protein [Oryza sativa Indica Group]
Length = 761
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 116/246 (47%), Gaps = 5/246 (2%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
R G PD+VSY +I+ + K+ KAY +M D ISPDV++Y+SII L
Sbjct: 188 RGGGSAPDVVSYTTVINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAM 247
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLM-----DEMVEKGLSPNAT 116
DKA +VL M + G P+ Y + + YC + + ++A G + D + GL P+
Sbjct: 248 DKAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIA 307
Query: 117 TYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDM 176
TY + + L L M+ G P+ L+ +Q KV+ A+ +++ M
Sbjct: 308 TYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKM 367
Query: 177 VEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQ 236
++G + + +LC G++ +A F +MI++G P + + + + NK
Sbjct: 368 RQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKW 427
Query: 237 EALQNL 242
E + L
Sbjct: 428 ERAEEL 433
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 108/217 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G+ PD V+Y +I + CK +VE A E+M DE +SP I Y S+I GL +
Sbjct: 367 MRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNK 426
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A +++ EM + G + +N+ I ++C R+ ++ L D MV G+ P+ TY+
Sbjct: 427 WERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYST 486
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + + L M+ G PNT + L+ + ++ AL L+ +M G
Sbjct: 487 LIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSG 546
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHK 217
I+ +++ L + A++ ++ + E G +
Sbjct: 547 VSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQ 583
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 109/226 (48%), Gaps = 5/226 (2%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ PD+V+Y+ +I CK + ++KA +++ M + P+ +YTSI+ G GQP +A
Sbjct: 227 ISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAI 286
Query: 66 DVLKEMKEYGCYPDA-----AAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
LK+++ G PD A Y ++ Y L L+D MV G+ P+ YN+
Sbjct: 287 GFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNI 346
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + ++ +M G P+ + ++ + + +VE A+ + M+++G
Sbjct: 347 LICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEG 406
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+V + L LC K AE+ LEM+++G + + F I
Sbjct: 407 LSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSI 452
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 102/222 (45%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G++PDI +Y L+ Y + + +++ M I PD Y +I G+ D+A
Sbjct: 301 GLEPDIATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEA 360
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
V +M++ G PDA Y A I C + R+ DA ++M+++GLSP YN
Sbjct: 361 MLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHG 420
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
N + L M+ G NT ++ ++ +V + +L++ MV G
Sbjct: 421 LCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPD 480
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
I+ L D C GK+ EA K M+ G KP+ V++R +
Sbjct: 481 IITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTL 522
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 63/123 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +GVKPDI++Y+ LID YC ++++A K++ M + P+ ++Y ++I G + +
Sbjct: 472 MVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISR 531
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A + KEM+ G PD YN ++ +R A L + E G +TYN+
Sbjct: 532 MGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNI 591
Query: 121 FFR 123
Sbjct: 592 ILH 594
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 100/252 (39%), Gaps = 43/252 (17%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G+KP+ V+Y LI+ YCK ++ A + ++M +SPD+I+Y I+ GL +
Sbjct: 507 MVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQTRR 566
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASG------LMDEMVE------ 108
A+++ + E G + + YN + C K DA LMD +E
Sbjct: 567 TAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNI 626
Query: 109 -----------------------KGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
GL PN TY L L L+ M G
Sbjct: 627 MIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNG 686
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGK----- 200
C ++ F+V+ ++ ++ A + + EK F + + DLL GK
Sbjct: 687 CTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSG-GKYQEYH 745
Query: 201 --LVEAEKSFLE 210
L E KSF+E
Sbjct: 746 RFLPEKYKSFIE 757
>gi|298204849|emb|CBI34156.3| unnamed protein product [Vitis vinifera]
Length = 442
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 112/224 (50%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
++G +PD ++ LI C + ++ +A + +KM DE P+V++Y ++I GL VG
Sbjct: 108 KLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTS 167
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
A +L+ M++ C PD Y + I + C +++ +A L +MV +G+SP+ TY
Sbjct: 168 AAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLV 227
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
+ + L +M+ + LP+ +V ++ KV A ++ + M+++G
Sbjct: 228 HALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVE 287
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ L D C ++ EA K F M+ KG P +S+ +
Sbjct: 288 PDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTL 331
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 112/255 (43%), Gaps = 34/255 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + +PD+V Y +ID CKDRQV +A+ + +M + ISPD+ +YTS++ L + +
Sbjct: 176 MEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCE 235
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+L +M PD ++ + C ++ +A ++D M+++G+ P+ TY
Sbjct: 236 WKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTT 295
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQ--------- 171
+++ + ++ M+ G P+ S L+ K+ ++LQ
Sbjct: 296 LMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINAGKKDGGGLVSLQEVIGLVKET 355
Query: 172 -------------------------LWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEK 206
L N+MV +++ + D LC GK++EA
Sbjct: 356 PDAVKGGAVEVIRKDKMKLFEKGRTLLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHD 415
Query: 207 SFLEMIEKGHKPSQV 221
MI++G +P+ V
Sbjct: 416 VVDMMIKRGVEPNAV 430
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 102/227 (44%), Gaps = 2/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV P++ + N LI+ +C +V A+ ++ K+ PD ++T++I GL + G+
Sbjct: 71 MDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGK 130
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + +M + G P+ Y I C A L+ M + P+ Y
Sbjct: 131 IGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTS 190
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+ ++NL+ +M+G G P+ + LV LC E + L N MV
Sbjct: 191 IIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVT-TLLNQMVNS 249
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+++ + D LC GK+ EA + MI++G +P V++ +
Sbjct: 250 KILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTL 296
>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 894
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 123/250 (49%), Gaps = 2/250 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G++P++ +Y LID +CK ++++ +++ M ++ + V+ + ++I G G
Sbjct: 321 MVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGM 380
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A VL MK P++ YN I +C K + A L+++M E LSPN TYN
Sbjct: 381 MEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNT 440
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ + S+W L+ M+ G +P+ ++ C F+ LCK KVE A Q++ + EK
Sbjct: 441 LIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCK-MGKVEQAHQVFESLKEK 499
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
+ + L D C K +A F M+ +G P+ ++F + + K E
Sbjct: 500 HAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDA 559
Query: 240 QNLSNKMALF 249
+L + M F
Sbjct: 560 MSLVDVMGKF 569
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 115/276 (41%), Gaps = 36/276 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+ + G D +Y LI YCK ++ AYK+ E M E + +SYT++I G VG+
Sbjct: 216 LMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGK 275
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A ++ +MKE GC+PD Y + +C + +A +EMVE G+ PN TY +
Sbjct: 276 IDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTV 335
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCL--------------------------------- 147
F + + M+ G +
Sbjct: 336 LIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNK 395
Query: 148 --PNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
PN+++ L+ R++ ++ A+ L N M E ++ + L LC + A
Sbjct: 396 VCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAW 455
Query: 206 KSFLEMIEKGHKPSQVSF-RRIKALMELANKQEALQ 240
+ MI+ G P Q +F I L ++ ++A Q
Sbjct: 456 RLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQ 491
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 110/239 (46%), Gaps = 10/239 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G +P++V+Y I YC+ ++ +A ++V K+++E I D Y ++ G +GQ
Sbjct: 601 MISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQ 660
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A VL M + GC P Y+ +++ K ++ GL N+T ++
Sbjct: 661 LDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEG---------MGLDLNSTNISV 711
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ D L+ +M+ GC+PN + L+K + E + +A +L+N M E G
Sbjct: 712 DNANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESG 771
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIK-ALMELANKQEA 238
+ + L C +G EA + M+E H S++ + L E N+++A
Sbjct: 772 ISPSENIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKA 830
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 121/269 (44%), Gaps = 27/269 (10%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G P+ +++N L+D K+ +VE A +V+ M D P V +YT +I + D+A
Sbjct: 535 GCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRA 594
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
L +M GC P+ Y A I+ YC RL +A ++ ++ E+G+ ++ Y++
Sbjct: 595 NMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNA 654
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK--LCKRQEK----------------- 165
+ L S++ + RM TGC P+ Q+ L+K + ++ K
Sbjct: 655 YGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNA 714
Query: 166 -------VEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
EI L+ MVE+G + L LC + L A + F M E G P
Sbjct: 715 NIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISP 774
Query: 219 SQ-VSFRRIKALMELANKQEALQNLSNKM 246
S+ + + + +L +EAL+ L + M
Sbjct: 775 SENIHNSLLSSCCKLGMHEEALRLLDSMM 803
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 100/218 (45%), Gaps = 2/218 (0%)
Query: 10 IVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLK 69
+ SYN L V + +++ + + M ++ + P++IS+ +++ +G A+
Sbjct: 155 VTSYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTMVNAHCKIGNVVVAKAYFC 214
Query: 70 EMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSN 129
+ ++G D+ Y + I YC L DA + + M ++G N +Y F
Sbjct: 215 GLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVG 274
Query: 130 DLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYILVS 188
+ + L+ +M GC P+ + LV C+ ++ E AL+ + +MVE G +
Sbjct: 275 KIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETE-ALKFFEEMVENGIEPNVYTY 333
Query: 189 DVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
VL D C +GK+ E + M+EKG S V F +
Sbjct: 334 TVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNAL 371
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 101/219 (46%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PD ++ ID CK +VE+A+++ E ++++ + YT++I G + A
Sbjct: 465 GFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDA 524
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ K M GC+P++ +N + ++ DA L+D M + P TY +
Sbjct: 525 HLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEE 584
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+D + +M+ +GC PN + +K RQ ++ A ++ + E+G
Sbjct: 585 ILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLD 644
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ DVL + +G+L A + M + G +PS+ ++
Sbjct: 645 SFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTY 683
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 91/200 (45%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV+P+++S+N +++ +CK V A + D +YTS+I G + + A
Sbjct: 185 GVEPNLISFNTMVNAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHELGDA 244
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
V + M + GC + +Y I +C ++ +A L +M E G P+ TY +
Sbjct: 245 YKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAA 304
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
F + + M+ G PN + L+ + K++ +++ + M+EKG S
Sbjct: 305 FCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSS 364
Query: 185 ILVSDVLFDLLCDMGKLVEA 204
++ + L D C G + +A
Sbjct: 365 VVPFNALIDGYCKRGMMEDA 384
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 87/197 (44%)
Query: 27 EKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAA 86
+A ++ + + S V SY + L G D+ + K+M G P+ ++N
Sbjct: 137 HEARFVLNLLTHHEFSLSVTSYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTM 196
Query: 87 IRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGC 146
+ +C + A +++ G ++ TY + ++L ++ ++ M GC
Sbjct: 197 VNAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGC 256
Query: 147 LPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEK 206
L N S L+ K++ AL+L+ M E G + VL C++GK EA K
Sbjct: 257 LRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALK 316
Query: 207 SFLEMIEKGHKPSQVSF 223
F EM+E G +P+ ++
Sbjct: 317 FFEEMVENGIEPNVYTY 333
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 54/121 (44%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E G+ P +N L+ CK E+A ++++ M + + + SY ++ GL G
Sbjct: 767 MKESGISPSENIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGN 826
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA ++ + + G D + + + + S L D M + G ++ T+ +
Sbjct: 827 QEKAEEIFRSLLSCGYNYDEVVWKVLLDGLVRKGYVDECSQLRDIMEKTGCRLHSDTHTM 886
Query: 121 F 121
Sbjct: 887 L 887
>gi|255660966|gb|ACU25652.1| pentatricopeptide repeat-containing protein [Verbena hastata]
Length = 376
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 110/241 (45%), Gaps = 3/241 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E G D ++Y L+ +CK+ ++K+ ++E + D +Y+++I GL
Sbjct: 85 MKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEAN 144
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A VL M + GC P+ YN I A + DA + EM SP TYN
Sbjct: 145 LDRALSVLNGMIKSGCKPNVHVYNTLINGLAGASKFEDAIRVFREMGTMHCSPTIITYNT 204
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++NL ++ G P + L+K KVE ALQLWN ++ KG
Sbjct: 205 LINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHKVERALQLWNQVISKG 264
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
F + + ++L LC +GK+ A + +M P+ VS LME K ++
Sbjct: 265 FKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHN---TLMEGFYKDGDIR 321
Query: 241 N 241
N
Sbjct: 322 N 322
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 91/181 (50%), Gaps = 3/181 (1%)
Query: 2 REMGV---KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLV 58
REMG P I++YN LI+ CK+ +AY +V+++ D+ + P VI+Y+ ++ GL L
Sbjct: 188 REMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLD 247
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
+ ++A + ++ G PD +N I C +++ A L +M +PN ++
Sbjct: 248 HKVERALQLWNQVISKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSH 307
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
N FY D+R++ ++ R++ G P+ S +K ++ A+ +D V
Sbjct: 308 NTLMEGFYKDGDIRNALMIWARILRNGLEPDIISYNITLKGLCSCNRISDAILFLHDAVT 367
Query: 179 K 179
K
Sbjct: 368 K 368
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 103/222 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G KP++ YN LI+ + E A ++ +M SP +I+Y ++I GL
Sbjct: 155 MIKSGCKPNVHVYNTLINGLAGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEM 214
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A +++KE+ + G P Y+ ++ C+ ++ A L ++++ KG P+ +N+
Sbjct: 215 FGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHKVERALQLWNQVISKGFKPDVQMHNI 274
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++ + +LY M C PN S L++ + + AL +W ++ G
Sbjct: 275 LIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALMIWARILRNG 334
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
I+ ++ LC ++ +A + + K P++++
Sbjct: 335 LEPDIISYNITLKGLCSCNRISDAILFLHDAVTKKIVPTKIT 376
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 109/244 (44%), Gaps = 1/244 (0%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E V PD V YN +++ Y + +++ +++ E M E + V S+ ++ GL G+ D
Sbjct: 18 ESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEG-NRSVSSFNIMMRGLFDNGKVD 76
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
+ + + MKE G D+ Y + +C + + +++ +KG +A Y+
Sbjct: 77 EVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMI 136
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
+L + ++ M+ +GC PN L+ K E A++++ +M
Sbjct: 137 NGLCKEANLDRALSVLNGMIKSGCKPNVHVYNTLINGLAGASKFEDAIRVFREMGTMHCS 196
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNL 242
I+ + L + LC EA E+++KG P +++ + + L +K E L
Sbjct: 197 PTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHKVERALQL 256
Query: 243 SNKM 246
N++
Sbjct: 257 WNQV 260
Score = 40.8 bits (94), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 70/161 (43%), Gaps = 1/161 (0%)
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
G D A V KE+ E PDA YNA + Y +++D L + M +G + + +++
Sbjct: 4 GDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEG-NRSVSSF 62
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
N+ R + + + +++ M +G + ++ + LV + ++ +L + +
Sbjct: 63 NIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQ 122
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
KG + + LC L A MI+ G KP+
Sbjct: 123 KGGVLDAFAYSAMINGLCKEANLDRALSVLNGMIKSGCKPN 163
Score = 37.4 bits (85), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 66/155 (42%), Gaps = 4/155 (2%)
Query: 91 CIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNT 150
C + + A + E+VE +SP+A YN ++ ++ + L+ MMG+ +
Sbjct: 1 CESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELW-EMMGSEGNRSV 59
Query: 151 QSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLE 210
S +++ KV+ + +W M E GF + +L C G ++ LE
Sbjct: 60 SSFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNG-YIDKSLHVLE 118
Query: 211 MIE-KGHKPSQVSFRR-IKALMELANKQEALQNLS 243
M E KG ++ I L + AN AL L+
Sbjct: 119 MAEQKGGVLDAFAYSAMINGLCKEANLDRALSVLN 153
>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Vitis vinifera]
Length = 877
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 112/226 (49%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E G P ++YN ++D + K+ ++ A + +M + +SP+V++YTS+I G + D
Sbjct: 602 EEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRID 661
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
A EM+E G D AY+A I +C + + A L E++E GLSPN YN
Sbjct: 662 LALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMI 721
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
F N++ ++ Y +M+ + + L+ ++ ++ A L+ +M+ KG
Sbjct: 722 SGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIV 781
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKA 228
I+ VL + LC+ G+L A K EM K PS + + + A
Sbjct: 782 PDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIA 827
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 112/240 (46%), Gaps = 1/240 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ P++VSYN +I +C+ ++ A + M D+ P+V++Y+ +I G G
Sbjct: 495 MVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGD 554
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA D+ +M P +N I C ++ +A + +E+G P+ TYN
Sbjct: 555 SEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNS 614
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F ++ S+ +Y M G PN + L+ + ++++AL+ ++M EKG
Sbjct: 615 IVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKG 674
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
+ L D C + A+ F E++E G P+++ + I +L N + AL
Sbjct: 675 LELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAAL 734
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 107/228 (46%), Gaps = 8/228 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + + P ++N +I+ CK Q+ +A ++ +E P ++Y SI+ G G
Sbjct: 565 MLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGN 624
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A V +EM E+G P+ Y + I +C + R+ A DEM EKGL + T Y+
Sbjct: 625 IDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSA 684
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIAL----QLWNDM 176
F D+ S+ +L+ ++ G PN ++ + +E AL ++ ND
Sbjct: 685 LIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDR 744
Query: 177 VEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
+ G+Y L D L G+LV A ++EM+ KG P ++F
Sbjct: 745 IPCDLGTYT----TLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFH 788
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 105/223 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E GV P++V+Y LI+ +CK +++ A K ++MR++ + DV +Y+++I G
Sbjct: 635 MCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRD 694
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A+D+ E+ E G P+ YN+ I + + A +M+ + + TY
Sbjct: 695 MESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTT 754
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
L + +LY M+ G +P+ + LV + ++E A ++ +M K
Sbjct: 755 LIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKN 814
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+L+ + L G L EA EM+++G P V++
Sbjct: 815 MTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTY 857
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 104/222 (46%), Gaps = 1/222 (0%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
+E GVK D +Y+ +I CK +++E+M++ P ++TS+I G
Sbjct: 287 KERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNM 346
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
+A + +EM G + + ++ YC L A L +++ E GL PN TY++
Sbjct: 347 VEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVL 406
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
S ++ + LY +M G P+ + L++ + E A +L+++ V+ G
Sbjct: 407 IEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGV 466
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ I +++ LC GK+ EA M+ +G P+ VS+
Sbjct: 467 AN-IFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSY 507
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 110/240 (45%), Gaps = 3/240 (1%)
Query: 7 KP-DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
KP ++V L+ YC ++ A + K+ ++ + P+ ++Y+ +I G G +KA
Sbjct: 361 KPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKAS 420
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
++ +MK G P N+ +R Y A +AS L DE V+ G++ N TYN+
Sbjct: 421 ELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVA-NIFTYNIMMSWL 479
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ + +L M+ G +PN S ++ R+ +++A +++DM+ + +
Sbjct: 480 CKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNV 539
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLSN 244
+ +L D G +A F +M+ P+ +F I L ++ EA L N
Sbjct: 540 VTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKN 599
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 61/114 (53%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
D+ +Y LID K+ ++ A + +M + I PD+I++ ++ GL GQ + AR +L
Sbjct: 748 DLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKIL 807
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
+EM P YN I Y L++A L DEM+++GL P+ TY++
Sbjct: 808 EEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILI 861
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 49/87 (56%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ PDI++++ L++ C Q+E A KI+E+M ++++P V+ Y ++I G G
Sbjct: 775 MLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGN 834
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAI 87
+A + EM + G PD Y+ I
Sbjct: 835 LKEAFTLHDEMLDRGLVPDDVTYDILI 861
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 97/223 (43%), Gaps = 1/223 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E G P ++ +I + +A ++ E+M + +++ TS++ G G
Sbjct: 321 MKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGN 380
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A ++ ++ E G +P+ Y+ I C + + AS L +M G+ P+ N
Sbjct: 381 LDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNS 440
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
R + + + L+ + G + + LCK K++ A L ++MV +G
Sbjct: 441 LLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCK-GGKMDEACSLLDNMVNQG 499
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + + C G + A F +M+ + KP+ V++
Sbjct: 500 MVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTY 542
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 87/214 (40%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
V P + N L+ + + + + KM I D + ++ G+ ++A
Sbjct: 221 VIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAE 280
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+ +E KE G DA AY+ I+ C L++EM E+G P+ T+
Sbjct: 281 EYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVAC 340
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
++ + L M+ G N L+K Q ++ AL L+N + E G
Sbjct: 341 VAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNK 400
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
+ VL + C+ G + +A + + +M G PS
Sbjct: 401 VTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPS 434
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 88/211 (41%)
Query: 13 YNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMK 72
+N L++ Y + ++E A M +D+ P V ++ L + RD+ +M
Sbjct: 193 FNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMV 252
Query: 73 EYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLR 132
G Y D + +R R+ +A E E+G+ +A Y++ + +
Sbjct: 253 LRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSN 312
Query: 133 SSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLF 192
L M G +P+ + ++ C Q + AL+L +M+ G ++V+ L
Sbjct: 313 LGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLM 372
Query: 193 DLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
C G L A F ++ E G P++V++
Sbjct: 373 KGYCAQGNLDSALNLFNKITEDGLFPNKVTY 403
Score = 40.4 bits (93), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 68/163 (41%), Gaps = 1/163 (0%)
Query: 79 DAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLY 138
D +N + Y A R+ +A + M+ + + P N+ N + +LY
Sbjct: 189 DHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLY 248
Query: 139 CRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDM 198
+M+ G + + +V+ C ++ +VE A + + + E+G ++ +C
Sbjct: 249 NKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKK 308
Query: 199 GKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQ 240
+ EM E+G PS+ +F I A + N EAL+
Sbjct: 309 PNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALR 351
>gi|357167657|ref|XP_003581270.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Brachypodium distachyon]
Length = 560
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 121/254 (47%), Gaps = 37/254 (14%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
PD+ S+N I C+ V+KA ++VE+M + SPD ++ ++GGL V + + R+
Sbjct: 225 SPDVWSFNVAIKGVCQVGDVQKALELVERMAEFGCSPDTVTNNILVGGLCRVKEVSRGRE 284
Query: 67 VLKEMKEYG-CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
VL+ ++ G C P+ Y + I YC + R+ DA + ++M+ G +PNA TYN+ +
Sbjct: 285 VLRRLQRDGVCMPNVVTYTSVISGYCKSGRMEDAMAVYNDMIGCGTTPNAVTYNVLINGY 344
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE------- 178
+ ++ S+ +Y +M+ C P+ + L+ R +++ A++ W +M +
Sbjct: 345 GKAGNMGSAVAVYQQMILRRCPPDVVTFSTLIDGYCRCGQLDDAMRTWTEMSQYQIQPNA 404
Query: 179 KGFGSYIL-----------------------------VSDVLFDLLCDMGKLVEAEKSFL 209
F IL + + + D+LC GK+ EA +
Sbjct: 405 HTFSIIILSFCKQNRSAEALRFLKELNMRTDIAPRAFICNPVIDVLCKGGKVDEANLILM 464
Query: 210 EMIEKGHKPSQVSF 223
EM KG +P + ++
Sbjct: 465 EMEGKGCRPDKYTY 478
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 94/216 (43%), Gaps = 1/216 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P++V+Y +I YCK ++E A + M +P+ ++Y +I G G G A V
Sbjct: 297 PNVVTYTSVISGYCKSGRMEDAMAVYNDMIGCGTTPNAVTYNVLINGYGKAGNMGSAVAV 356
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
++M C PD ++ I YC +L DA EM + + PNA T+++ F
Sbjct: 357 YQQMILRRCPPDVVTFSTLIDGYCRCGQLDDAMRTWTEMSQYQIQPNAHTFSIIILSFCK 416
Query: 128 SNDLRSSWNLYCRM-MGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
N + + M T P C ++ + + KV+ A + +M KG
Sbjct: 417 QNRSAEALRFLKELNMRTDIAPRAFICNPVIDVLCKGGKVDEANLILMEMEGKGCRPDKY 476
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
+L C G++ EA F +M++ G P ++
Sbjct: 477 TYTILIIGHCMKGRISEAITFFNKMVDTGCSPDSIT 512
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 102/226 (45%), Gaps = 2/226 (0%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEK-MRDEDISPDVISYTSIIGGLGLVGQP 61
+ G + +YN L++ + +V+ A + E ++ SPDV S+ I G+ VG
Sbjct: 185 QFGCCVEAYAYNKLMNSFIGCGRVQDAVALFEGWIQGGAYSPDVWSFNVAIKGVCQVGDV 244
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLS-PNATTYNL 120
KA ++++ M E+GC PD N + C K + ++ + G+ PN TY
Sbjct: 245 QKALELVERMAEFGCSPDTVTNNILVGGLCRVKEVSRGREVLRRLQRDGVCMPNVVTYTS 304
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ S + + +Y M+G G PN + L+ + + A+ ++ M+ +
Sbjct: 305 VISGYCKSGRMEDAMAVYNDMIGCGTTPNAVTYNVLINGYGKAGNMGSAVAVYQQMILRR 364
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ L D C G+L +A +++ EM + +P+ +F I
Sbjct: 365 CPPDVVTFSTLIDGYCRCGQLDDAMRTWTEMSQYQIQPNAHTFSII 410
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 82/177 (46%), Gaps = 1/177 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G P+ V+YN LI+ Y K + A + ++M PDV++++++I G GQ D A
Sbjct: 329 GTTPNAVTYNVLINGYGKAGNMGSAVAVYQQMILRRCPPDVVTFSTLIDGYCRCGQLDDA 388
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEM-VEKGLSPNATTYNLFFR 123
EM +Y P+A ++ I ++C R +A + E+ + ++P A N
Sbjct: 389 MRTWTEMSQYQIQPNAHTFSIIILSFCKQNRSAEALRFLKELNMRTDIAPRAFICNPVID 448
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
V + + + M G GC P+ + L+ + ++ A+ +N MV+ G
Sbjct: 449 VLCKGGKVDEANLILMEMEGKGCRPDKYTYTILIIGHCMKGRISEAITFFNKMVDTG 505
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 103/224 (45%), Gaps = 3/224 (1%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDIS-PDVISYTSIIGGLGLVGQP 61
++ + P SY +I + C+ + A K+ ++M D+ P+ + + G G
Sbjct: 114 QLAIPPSAHSYRYVISMLCQSSRHTDALKLFDQMTDQSGHFPNARFLSFLAGSCANAGFL 173
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGL-SPNATTYNL 120
D A +L + ++GC +A AYN + ++ R++DA L + ++ G SP+ ++N+
Sbjct: 174 DAAAALLSKAPQFGCCVEAYAYNKLMNSFIGCGRVQDAVALFEGWIQGGAYSPDVWSFNV 233
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ D++ + L RM GC P+T + LV R ++V ++ + G
Sbjct: 234 AIKGVCQVGDVQKALELVERMAEFGCSPDTVTNNILVGGLCRVKEVSRGREVLRRLQRDG 293
Query: 181 FG-SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + C G++ +A + +MI G P+ V++
Sbjct: 294 VCMPNVVTYTSVISGYCKSGRMEDAMAVYNDMIGCGTTPNAVTY 337
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 65/123 (52%), Gaps = 1/123 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMR-DEDISPDVISYTSIIGGLGLVG 59
M + ++P+ +++ +I +CK + +A + ++++ DI+P +I L G
Sbjct: 395 MSQYQIQPNAHTFSIIILSFCKQNRSAEALRFLKELNMRTDIAPRAFICNPVIDVLCKGG 454
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ D+A +L EM+ GC PD Y I +C+ R+ +A ++MV+ G SP++ T N
Sbjct: 455 KVDEANLILMEMEGKGCRPDKYTYTILIIGHCMKGRISEAITFFNKMVDTGCSPDSITVN 514
Query: 120 LFF 122
F
Sbjct: 515 SFI 517
Score = 43.9 bits (102), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 33/69 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G +PD +Y LI +C ++ +A KM D SPD I+ S IG L G
Sbjct: 466 MEGKGCRPDKYTYTILIIGHCMKGRISEAITFFNKMVDTGCSPDSITVNSFIGCLLKAGM 525
Query: 61 PDKARDVLK 69
P + ++K
Sbjct: 526 PSEVDRIMK 534
>gi|449444228|ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
gi|449492643|ref|XP_004159059.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
Length = 585
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 113/224 (50%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV+PD+V+++ LID CK+ V +A K +E M I PD+ ++TS+I G LVG
Sbjct: 263 MVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGD 322
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A+++ M G PD +Y I YC + +A L +EM+ G P+ T+ +
Sbjct: 323 LDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCV 382
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSC-MFLVKLCKRQEKVEIALQLWNDMVEK 179
+ + + + + L+ + N C +FL LCK E A++L+N++
Sbjct: 383 LLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFE-AMELFNELKSY 441
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I + L D LC KL A + F ++ ++G +P V++
Sbjct: 442 NMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTY 485
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 113/246 (45%), Gaps = 12/246 (4%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
KP+I SYN +ID CK + ++A ++ +M D+ + PDV++++++I L G +A+
Sbjct: 234 KPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKK 293
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
L+ M G PD + + I +C+ L A L M KG P+ +Y + +
Sbjct: 294 FLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYC 353
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+ ++ + LY M+ G P+ ++ L+K KV A +L+ + +
Sbjct: 354 KTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLY 413
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF----------RRIKALMELANK- 235
+ V D LC G L EA + F E+ K SF R+++ EL K
Sbjct: 414 ICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKL 473
Query: 236 -QEALQ 240
QE LQ
Sbjct: 474 SQEGLQ 479
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 71/120 (59%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
++ +K DI S+NCLID CK R++E A+++ EK+ E + PDV++Y +I G GQ
Sbjct: 438 LKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQ 497
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A + + M+E GC P+ Y+A + + +L + L+ +M++K +S A+ Y +
Sbjct: 498 VDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQKDVSLAASIYTI 557
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 116/259 (44%), Gaps = 12/259 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ P+ + N LI+ C +V + + + PDV++YTS+I GL + +
Sbjct: 117 MHLAGLSPNFFTLNILINCLCNVNRVREGLSAMAGIMRRGYIPDVVTYTSLIKGLCMEHR 176
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLS-------P 113
+A + M++ GC+P+ Y I+ C + A L EM+ G S P
Sbjct: 177 ISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLN-GTSPYAINCKP 235
Query: 114 NATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQL 172
N +YN+ + + L+ M+ G P+ + L+ LCK +E A +
Sbjct: 236 NIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIE-AKKF 294
Query: 173 WNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALME 231
M+ +G + L + C +G L A++ FL M KG++P +S+ I +
Sbjct: 295 LETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCK 354
Query: 232 LANKQEALQNLSNKMALFG 250
N +EA++ L N+M G
Sbjct: 355 TFNVEEAMK-LYNEMLRVG 372
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 105/225 (46%), Gaps = 8/225 (3%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
I+S+N L+ K + + + + +KM +SP+ + +I L V + + +
Sbjct: 90 SIISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILINCLCNVNRVREGLSAM 149
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
+ G PD Y + I+ C+ R+ +A+ L M + G PN TY + +
Sbjct: 150 AGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRT 209
Query: 129 NDLRSSWNLYCRMM-GT-----GCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEKGF 181
++ + L+ M+ GT C PN S ++ +LCK + E A +L+N+MV++G
Sbjct: 210 GNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKE-AKRLFNEMVDQGV 268
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ L D LC G ++EA+K M+ +G P +F +
Sbjct: 269 RPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSL 313
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 93/214 (43%), Gaps = 35/214 (16%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G +PD++SY LI YCK VE+A K+ +M PD+ ++ ++ GL L G+
Sbjct: 333 MPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGK 392
Query: 61 PDKAR-----------------------------------DVLKEMKEYGCYPDAAAYNA 85
A+ ++ E+K Y D ++N
Sbjct: 393 VGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNC 452
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
I C A++L A L +++ ++GL P+ TY + F + + ++ L+ M G
Sbjct: 453 LIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEENG 512
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
C PN + L+ + K+E ++L + M++K
Sbjct: 513 CTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQK 546
>gi|449446442|ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 111/235 (47%), Gaps = 16/235 (6%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMR-DEDI---------------SPDVISY 48
G P++++Y LID YCK +EKA +I +MR D DI P+V++Y
Sbjct: 589 GCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTY 648
Query: 49 TSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVE 108
+++ GL + ARD+L+ M GC P+ Y+A I +C A +L +A + +MVE
Sbjct: 649 GALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVE 708
Query: 109 KGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEI 168
G +PN TY+ + L + +M+ C PN ++ + K +
Sbjct: 709 HGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDE 768
Query: 169 ALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
A +L M EKG ++ + D GK+ + + F EM KG P+ V++
Sbjct: 769 AYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTY 823
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 107/240 (44%), Gaps = 20/240 (8%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PD +Y+ +I C +VE A+ + ++M+ + PDV +YT +I G +A
Sbjct: 484 GFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQA 543
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ L EM GC P Y I Y AK++ A+ L + M+ KG PN TY
Sbjct: 544 HNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDG 603
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK------------------LCKRQEKV 166
+ S ++ + +Y RM G +P+ F +K LCK KV
Sbjct: 604 YCKSGNIEKACQIYARMRGDADIPDVDM-YFKIKNNVAEKPNVVTYGALVDGLCKAH-KV 661
Query: 167 EIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ A L M G +V D L D C KL EA++ F +M+E G+ P+ ++ +
Sbjct: 662 KDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSL 721
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 104/212 (49%), Gaps = 2/212 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G P++ +Y+ LID KD++++ K++ KM + +P+++ YT +I GL V +
Sbjct: 706 MVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAK 765
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A ++ M+E GC P+ Y A I + A ++ L EM KG +PN TY +
Sbjct: 766 TDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTV 825
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L ++ L M T + S +++ KR+ ++L L ++ + G
Sbjct: 826 LINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKRE--FILSLGLLEEVEKNG 883
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMI 212
IL+ VL D G+L A + E+I
Sbjct: 884 SAPIILLYKVLIDNFVKAGRLEVALELHKEVI 915
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 114/274 (41%), Gaps = 51/274 (18%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ GV PD+ +Y LID + K +++A+ +++M + P V++YT++I +
Sbjct: 515 MKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKK 574
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYC----------IAKRLR------------- 97
A ++ + M GC+P+ Y A I YC I R+R
Sbjct: 575 VSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFK 634
Query: 98 ----------------------------DASGLMDEMVEKGLSPNATTYNLFFRVFYWSN 129
DA L++ M G PN Y+ F +
Sbjct: 635 IKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAA 694
Query: 130 DLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSD 189
L + ++ +M+ G PN + L+ + +++++ L++ + M+E I++
Sbjct: 695 KLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYT 754
Query: 190 VLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ D L + K EA K L M EKG KP+ V++
Sbjct: 755 EMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTY 788
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 5/208 (2%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G +P+ + Y+ LID +CK ++++A ++ KM + +P+V +Y+S+I L + D
Sbjct: 675 GCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLV 734
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
VL +M E C P+ Y I + +A LM M EKG PN TY
Sbjct: 735 LKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDG 794
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE----KG 180
F + + L+ M GC PN + L+ C ++ A L +M + K
Sbjct: 795 FGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKH 854
Query: 181 FGSYI-LVSDVLFDLLCDMGKLVEAEKS 207
SY ++ + + +G L E EK+
Sbjct: 855 VSSYCKVIEGYKREFILSLGLLEEVEKN 882
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 107/266 (40%), Gaps = 11/266 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E+G+ D + CK + +A ++EK ED P+ I Y +I GL
Sbjct: 267 MSELGLSMDEFTLGFFAQALCKVGKWREALSLIEK---EDFVPNTILYNKMISGLCEASF 323
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A D L M+ C P+ Y + K+L ++ M+ +G P+ T +N
Sbjct: 324 FEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNS 383
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQE-----KVEIALQLWN 174
+ S+D ++ L +M C P L+ +C E E+A + +N
Sbjct: 384 LVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYN 443
Query: 175 DMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELAN 234
+M+ G + LC GK +A K EM+ G P ++ + + A+
Sbjct: 444 EMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNAS 503
Query: 235 KQEALQNLSNKMALFGPSMIPKREEY 260
+ E L +M G ++P Y
Sbjct: 504 RVENAFFLFKEMK--GTGVVPDVYTY 527
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 95/225 (42%), Gaps = 6/225 (2%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGL---GLVGQP 61
G P +N L+ YCK AYK+++KM + P + Y +IG + G + P
Sbjct: 373 GCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGP 432
Query: 62 ---DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
+ A EM G + + R C + A ++ EM+ G P+ +TY
Sbjct: 433 VTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTY 492
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
+ ++ + +++ L+ M GTG +P+ + L+ + ++ A ++MV
Sbjct: 493 SEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVR 552
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G ++ L K+ A + F MI KG P+ +++
Sbjct: 553 DGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITY 597
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 80/179 (44%), Gaps = 4/179 (2%)
Query: 14 NCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKE 73
N LI C++ A + + +++D P ++Y +++ + D A+ V +EM E
Sbjct: 210 NVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSE 269
Query: 74 YGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRS 133
G D + C + R+A L++ ++ PN YN ++
Sbjct: 270 LGLSMDEFTLGFFAQALCKVGKWREALSLIE---KEDFVPNTILYNKMISGLCEASFFEE 326
Query: 134 SWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG-FGSYILVSDVL 191
+ + RM T C+PN Q+ L+ C ++++ ++ + M+ +G + SY + + ++
Sbjct: 327 AMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLV 385
>gi|297791089|ref|XP_002863429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297309264|gb|EFH39688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 472
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 107/225 (47%), Gaps = 3/225 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCK-DRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVG 59
MRE+G+ P + S N LI C+ D V+ KI +M PD +Y ++I GL G
Sbjct: 147 MREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFHEMPKRGCDPDSYTYGTLISGLCRFG 206
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ D+A+ + EM E C P Y + I C +K + +A ++EM KG+ PN TY+
Sbjct: 207 RIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYVEEMKGKGIEPNVFTYS 266
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVE 178
+ L+ MM GC PN + L+ LCK Q K++ A++L + M
Sbjct: 267 SLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQ-KIQEAVELLDRMNL 325
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+G + + C + K EA EMI G P+++++
Sbjct: 326 QGLKPDAGLYGKVISGFCAVSKFREAANFLDEMILGGITPNRLTW 370
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 99/187 (52%), Gaps = 8/187 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G++P++ +Y+ L+D CKD + +A ++ E M P++++YT++I GL +
Sbjct: 253 MKGKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQK 312
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++L M G PDA Y I +C + R+A+ +DEM+ G++PN T+N+
Sbjct: 313 IQEAVELLDRMNLQGLKPDAGLYGKVISGFCAVSKFREAANFLDEMILGGITPNRLTWNI 372
Query: 121 FFRVF------YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLW 173
+ +N ++ LY M G ++ LVK LCK+ E + A+QL
Sbjct: 373 HVKTSNEVVRGLCTNYPSRAFTLYLSMRSRGISVEVETLDSLVKCLCKKGE-FQKAVQLV 431
Query: 174 NDMVEKG 180
+++V G
Sbjct: 432 DEIVTDG 438
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 108/232 (46%), Gaps = 10/232 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E P +V+Y LI+ C + V++A + VE+M+ + I P+V +Y+S++ GL G+
Sbjct: 218 MVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYVEEMKGKGIEPNVFTYSSLMDGLCKDGR 277
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++ + M GC P+ Y I C +++++A L+D M +GL P+A Y
Sbjct: 278 SLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGK 337
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK--------LCKRQEKVEIALQL 172
F + R + N M+ G PN + VK LC A L
Sbjct: 338 VISGFCAVSKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCTNYPSR--AFTL 395
Query: 173 WNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
+ M +G + D L LC G+ +A + E++ G P++ +++
Sbjct: 396 YLSMRSRGISVEVETLDSLVKCLCKKGEFQKAVQLVDEIVTDGCIPNKGTWK 447
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 115/270 (42%), Gaps = 5/270 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLV-G 59
M++ P +Y ++ + ++ Q+ A+K + MR+ + P V S +I L G
Sbjct: 112 MKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDG 171
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
D + EM + GC PD+ Y I C R+ +A L EMVEK +P TY
Sbjct: 172 TVDAGLKIFHEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYT 231
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVE 178
S ++ + M G G PN + L+ LCK ++ A++L+ M+
Sbjct: 232 SLINGLCGSKNVDEAMRYVEEMKGKGIEPNVFTYSSLMDGLCKDGRSLQ-AMELFEMMMA 290
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEA 238
+G ++ L LC K+ EA + M +G KP + ++ + +K
Sbjct: 291 RGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAVSKFRE 350
Query: 239 LQNLSNKMALFGPSMIPKREEYLAEMSASD 268
N ++M L G + P R + + S+
Sbjct: 351 AANFLDEMILGG--ITPNRLTWNIHVKTSN 378
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 99/222 (44%), Gaps = 5/222 (2%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDED--ISPDVISYTSIIGGLGLVGQPD 62
G D S+ ++ + + A IV +M+ E+ +S D++ SI G G V +P
Sbjct: 46 GYLHDQSSFGYMVSRLVSANKFKAAEDIVARMKIENCVVSEDIL--LSICRGYGRVHRPF 103
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
+ V +MK++ C P AY + +L A M E GL P + N+
Sbjct: 104 DSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLI 163
Query: 123 RVFYWSN-DLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
+ ++ + + ++ M GC P++ + L+ R +++ A +L+ +MVEK
Sbjct: 164 KALCRNDGTVDAGLKIFHEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDC 223
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ L + LC + EA + EM KG +P+ ++
Sbjct: 224 APTVVTYTSLINGLCGSKNVDEAMRYVEEMKGKGIEPNVFTY 265
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 69/163 (42%), Gaps = 41/163 (25%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G +P++V+Y LI CK++++++A +++++M + + PD Y +I G V +
Sbjct: 288 MMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAVSK 347
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIR-----------NY------------------- 90
+A + L EM G P+ +N ++ NY
Sbjct: 348 FREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCTNYPSRAFTLYLSMRSRGISVE 407
Query: 91 ---------CIAKR--LRDASGLMDEMVEKGLSPNATTYNLFF 122
C+ K+ + A L+DE+V G PN T+ L
Sbjct: 408 VETLDSLVKCLCKKGEFQKAVQLVDEIVTDGCIPNKGTWKLLI 450
>gi|224130680|ref|XP_002320901.1| predicted protein [Populus trichocarpa]
gi|222861674|gb|EEE99216.1| predicted protein [Populus trichocarpa]
Length = 475
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 102/213 (47%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
V P+ SYN LI +C + Q+ AY + +M D+ PDV SY ++ L Q + A
Sbjct: 202 VFPNTKSYNILIRAFCLNGQISMAYSLFNQMFKRDVMPDVESYRILMQALCRKSQVNGAV 261
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
D+L++M G PDA +Y + + C K+LR+A L+ M KG +P+ YN F
Sbjct: 262 DLLEDMLNKGYVPDALSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIIHYNTVILGF 321
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ + M GC+PN S LV Q + A +M+ KGF +
Sbjct: 322 CREGRAMDACKVLEDMESNGCMPNLVSYRTLVGGLCDQGMFDEAKSHLEEMMMKGFSPHF 381
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
VS+ L C++GK+ EA E+++ G P
Sbjct: 382 AVSNALIKGFCNVGKIEEACGVVEELLKHGEAP 414
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 70/118 (59%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G PDI+ YN +I +C++ + A K++E M P+++SY +++GGL G
Sbjct: 302 MKVKGCNPDIIHYNTVILGFCREGRAMDACKVLEDMESNGCMPNLVSYRTLVGGLCDQGM 361
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
D+A+ L+EM G P A NA I+ +C ++ +A G+++E+++ G +P+ T+
Sbjct: 362 FDEAKSHLEEMMMKGFSPHFAVSNALIKGFCNVGKIEEACGVVEELLKHGEAPHTETW 419
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 85/162 (52%), Gaps = 1/162 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD +SY L++ C+ +++ +AYK++ +M+ + +PD+I Y ++I G G+
Sbjct: 267 MLNKGYVPDALSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIIHYNTVILGFCREGR 326
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A VL++M+ GC P+ +Y + C +A ++EM+ KG SP+ N
Sbjct: 327 AMDACKVLEDMESNGCMPNLVSYRTLVGGLCDQGMFDEAKSHLEEMMMKGFSPHFAVSNA 386
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCK 161
+ F + + + ++ G P+T++ + +V ++C+
Sbjct: 387 LIKGFCNVGKIEEACGVVEELLKHGEAPHTETWVMMVSRICE 428
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 104/224 (46%), Gaps = 7/224 (3%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD--- 62
V P + SY +I++Y + +KA KI + D +P I+ L V +
Sbjct: 133 VTPTLFSY--IINIYGEANLPDKALKIFYTILKFDCNPSPKHLNGILEIL--VSHQNYIK 188
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
A D+ K+ Y +P+ +YN IR +C+ ++ A L ++M ++ + P+ +Y +
Sbjct: 189 PAFDLFKDAHTYDVFPNTKSYNILIRAFCLNGQISMAYSLFNQMFKRDVMPDVESYRILM 248
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
+ + + + +L M+ G +P+ S L+ R++K+ A +L M KG
Sbjct: 249 QALCRKSQVNGAVDLLEDMLNKGYVPDALSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 308
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
I+ + + C G+ ++A K +M G P+ VS+R +
Sbjct: 309 PDIIHYNTVILGFCREGRAMDACKVLEDMESNGCMPNLVSYRTL 352
Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 50/106 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P++VSY L+ C ++A +E+M + SP ++I G VG+
Sbjct: 337 MESNGCMPNLVSYRTLVGGLCDQGMFDEAKSHLEEMMMKGFSPHFAVSNALIKGFCNVGK 396
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEM 106
++A V++E+ ++G P + + C L+ ++D++
Sbjct: 397 IEEACGVVEELLKHGEAPHTETWVMMVSRICEVDDLQRIGEILDKV 442
>gi|384251704|gb|EIE25181.1| TPR-like protein [Coccomyxa subellipsoidea C-169]
Length = 905
Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 107/226 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G P++V+YN LIDVY K E+ K++ M+ E + P + +Y ++I + GQ
Sbjct: 271 MRQDGACPNVVTYNTLIDVYGKMGLWEQGIKVLTLMKTEGVEPVLRTYNTLIIACNMCGQ 330
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
P +A V K M + G P+A YNA I Y A +L + EMV KG + TY+
Sbjct: 331 PREAMAVYKRMLDEGYSPNATTYNALISAYGKAGQLDKVMEVFQEMVHKGCERSVITYSS 390
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + L+ M G GC+PNT + L+ C + + E A +++ M + G
Sbjct: 391 LISACEKAGQWELALELFNEMAGEGCIPNTVTYNSLITACAQGAQWEKASEVFEQMQKGG 450
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ L G+ A ++ +M + KP + F I
Sbjct: 451 CTPDVVTFTALISSYEKGGQWRRALGAYEQMRLQRCKPDAIVFNAI 496
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 104/223 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR ++ ++ +Y L++V K A MR + P+V++Y ++I G +G
Sbjct: 236 MRVRNIERNVHTYTALMNVCIKCGNCPLALDTYNHMRQDGACPNVVTYNTLIDVYGKMGL 295
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++ VL MK G P YN I + + R+A + M+++G SPNATTYN
Sbjct: 296 WEQGIKVLTLMKTEGVEPVLRTYNTLIIACNMCGQPREAMAVYKRMLDEGYSPNATTYNA 355
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + L ++ M+ GC + + L+ C++ + E+AL+L+N+M +G
Sbjct: 356 LISAYGKAGQLDKVMEVFQEMVHKGCERSVITYSSLISACEKAGQWELALELFNEMAGEG 415
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + L + +A + F +M + G P V+F
Sbjct: 416 CIPNTVTYNSLITACAQGAQWEKASEVFEQMQKGGCTPDVVTF 458
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 55/109 (50%), Gaps = 3/109 (2%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G P+ V+YN LI + Q EKA ++ E+M+ +PDV+++T++I GQ +A
Sbjct: 415 GCIPNTVTYNSLITACAQGAQWEKASEVFEQMQKGGCTPDVVTFTALISSYEKGGQWRRA 474
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYC---IAKRLRDASGLMDEMVEKG 110
++M+ C PDA +NA I + R A L + VE G
Sbjct: 475 LGAYEQMRLQRCKPDAIVFNAIIDTLWETGVIWAQRKALALFQQAVEDG 523
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/258 (20%), Positives = 102/258 (39%), Gaps = 37/258 (14%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
D+ +Y +I + + V++A + ++MR +I +V +YT+++ G A D
Sbjct: 209 DVYTYTAMISMCIYQQDVDRAMDLAKEMRVRNIERNVHTYTALMNVCIKCGNCPLALDTY 268
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
M++ G P+ YN I Y ++ M +G+ P TYN
Sbjct: 269 NHMRQDGACPNVVTYNTLIDVYGKMGLWEQGIKVLTLMKTEGVEPVLRTYNTLI------ 322
Query: 129 NDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVS 188
+ C M G + A+ ++ M+++G+
Sbjct: 323 --------IACNMCG---------------------QPREAMAVYKRMLDEGYSPNATTY 353
Query: 189 DVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMAL 248
+ L G+L + + F EM+ KG + S +++ + + E A + E L N+MA
Sbjct: 354 NALISAYGKAGQLDKVMEVFQEMVHKGCERSVITYSSLISACEKAGQWELALELFNEMA- 412
Query: 249 FGPSMIPKREEYLAEMSA 266
G IP Y + ++A
Sbjct: 413 -GEGCIPNTVTYNSLITA 429
Score = 43.5 bits (101), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGL---GL 57
M++ G PD+V++ LI Y K Q +A E+MR + PD I + +II L G+
Sbjct: 446 MQKGGCTPDVVTFTALISSYEKGGQWRRALGAYEQMRLQRCKPDAIVFNAIIDTLWETGV 505
Query: 58 VGQPDKARDVLKEMKEYGCY 77
+ KA + ++ E G +
Sbjct: 506 IWAQRKALALFQQAVEDGHF 525
>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
Length = 845
Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 124/240 (51%), Gaps = 1/240 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E+G +P +Y ++D C++R+ ++A +++++M ++ ++P V++ T++I G+
Sbjct: 280 MKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGR 339
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A VL+ MK GC P+ YNA ++ +C ++ A L+++M G++P+A TYNL
Sbjct: 340 MSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNL 399
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
R + S++ L M G G + + + L+ + + + A L++ + +G
Sbjct: 400 LIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRG 459
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
+ + L + LC GK A K +M+ G P ++ I+ L ++ QE L
Sbjct: 460 IKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGL 519
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 104/224 (46%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G KP++ +YN L+ +C + +V KA ++ KMR ++PD ++Y +I G + G
Sbjct: 350 MKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGH 409
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A +L+ M+ G D YNA I C R A L D + +G+ PNA T+N
Sbjct: 410 IESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNS 469
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEK 179
S +W +M+ GC P+T + F+ LCK + E L +M++K
Sbjct: 470 LINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQE-GLSFIGEMLQK 528
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ ++ L +++ EM+ G P V++
Sbjct: 529 DVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTY 572
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 99/223 (44%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+ P +V+ +I+ YCK+ ++ A +++E M+ P+V +Y +++ G G+
Sbjct: 315 MFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGK 374
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA +L +M+ G PDA YN IR CI + A L+ M GL + TYN
Sbjct: 375 VHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNA 434
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ +L+ + G PN + L+ + K +IA + MV G
Sbjct: 435 LINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAG 494
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ LC M E EM++K KPS V++
Sbjct: 495 CTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNY 537
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 102/244 (41%), Gaps = 32/244 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G +PD ++N LI YC+ QV+ A + +KM + DV+SY ++I GL G+
Sbjct: 179 MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 238
Query: 61 PDKARDV-------------------------------LKEMKEYGCYPDAAAYNAAIRN 89
D+A ++ L+ MKE G P AY A +
Sbjct: 239 IDEAVELFGEMDQPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDF 298
Query: 90 YCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPN 149
C ++ ++A ++ EM EKGL+P T + + + + M GC PN
Sbjct: 299 RCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPN 358
Query: 150 TQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFL 209
+ LV+ + KV A+ L N M G + ++L C G +E+ L
Sbjct: 359 VWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGH-IESAFRLL 417
Query: 210 EMIE 213
++E
Sbjct: 418 RLME 421
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 96/228 (42%), Gaps = 41/228 (17%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSII----------GG 54
G+KP+ V++N LI+ CK + + A+K +EKM +PD +Y+S I G
Sbjct: 459 GIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEG 518
Query: 55 LGLVGQ-------PDKA------RDVLK------------EMKEYGCYPDAAAYNAAIRN 89
L +G+ P +LK EM GC PD Y ++R
Sbjct: 519 LSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRA 578
Query: 90 YCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPN 149
YCI RL +A ++ EM + G++ + YN + ++ +M +PN
Sbjct: 579 YCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPN 638
Query: 150 TQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDV--LFDLL 195
+ L++ R VE L L G I ++DV LFD++
Sbjct: 639 QFTYFILLRHLVRMRLVEDVLPL----TPAGVWKAIELTDVFGLFDVM 682
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 100/247 (40%), Gaps = 14/247 (5%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
R P +YN +I C+ + +A + + M PD ++ S+I G Q
Sbjct: 145 RHAPPAPTAPTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQV 204
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
D ARD+ +M G D +Y I C A R+ +A L EM + P+ Y
Sbjct: 205 DVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQ----PDMHMYAAL 260
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
+ + + RM G P+T++ +V R+ K + A ++ +M EKG
Sbjct: 261 VKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGL 320
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR----------RIKALME 231
++ + + C G++ +A + M +G KP+ ++ ++ M
Sbjct: 321 APCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMT 380
Query: 232 LANKQEA 238
L NK A
Sbjct: 381 LLNKMRA 387
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 97/243 (39%), Gaps = 17/243 (6%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + VKP V+Y +I K+R + +M +PDV++YT+ + + G+
Sbjct: 525 MLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGR 584
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A +VL EM + G D AYN + + + A ++ +M PN TY +
Sbjct: 585 LNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFI 644
Query: 121 FFRVF----------------YW-SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQ 163
R W + +L + L+ M LPN+ + +++
Sbjct: 645 LLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSED 704
Query: 164 EKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ E A L + M E + L C + ++A MI+ G P +S+
Sbjct: 705 GRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSY 764
Query: 224 RRI 226
+ +
Sbjct: 765 QHL 767
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/278 (20%), Positives = 107/278 (38%), Gaps = 58/278 (20%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD+V+Y + YC + ++ +A ++ +M ++ D ++Y +++ G +GQ
Sbjct: 560 MVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQ 619
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYC-----------------IAKRLRDASGLM 103
D A +LK+M P+ Y +R+ A L D GL
Sbjct: 620 TDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLF 679
Query: 104 DEMVEKGLSPNATTYNLFFRVFYWSNDLRS------------------------------ 133
D M + PN+ TY+ F S D R+
Sbjct: 680 DVMKKNEFLPNSGTYSSILEGF--SEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFC 737
Query: 134 -------SWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+W L C M+ G +P S L+ + + + A +++ + K + +
Sbjct: 738 KSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEI 797
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGH-KPSQVSF 223
V V+ D L G + + + M+E+ + +PS ++
Sbjct: 798 VWKVIIDGLIKKGH-SDISREMIIMLERMNCRPSHQTY 834
>gi|326522214|dbj|BAK04235.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 966
Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 116/243 (47%), Gaps = 18/243 (7%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD +Y +I C+ ++V+KA+ + ++M+ ++PDV +YT +I G
Sbjct: 443 MMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGL 502
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A+ EM+ GC P+ Y A + Y +K+L A+ + MV PNA TY+
Sbjct: 503 IEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSA 562
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTG----------------CLPNTQSCMFLVK-LCKRQ 163
+ +++ + +Y +++GT PN + LV LCK Q
Sbjct: 563 LIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQ 622
Query: 164 EKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
KV A L + M+ G +V D L D C +G++ A++ FL M + G+ PS ++
Sbjct: 623 -KVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTY 681
Query: 224 RRI 226
+
Sbjct: 682 TSL 684
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 127/275 (46%), Gaps = 18/275 (6%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G P++V+Y L+ Y K +Q+ +A I +M + P+ I+Y+++I GL G+
Sbjct: 513 MRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGE 572
Query: 61 PDKARDVLKEMK------EYGCY----------PDAAAYNAAIRNYCIAKRLRDASGLMD 104
KA +V ++ E Y P+ Y A + C A+++ DA L+D
Sbjct: 573 IQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLD 632
Query: 105 EMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQE 164
M+ G PN Y+ F ++ S+ ++ RM G LP+ + L+ +
Sbjct: 633 AMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDG 692
Query: 165 KVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
++++A+++ + M++ ++ + D LC G+ +A M +KG P+ V++
Sbjct: 693 RLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYT 752
Query: 225 RIKALMELANKQEALQNLSNKMALFG--PSMIPKR 257
+ + A K +A L +M G P+ + R
Sbjct: 753 ALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYR 787
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 101/219 (46%), Gaps = 16/219 (7%)
Query: 21 CKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDA 80
C + EKA++IV++M + PD +YT +I L + DKA + +EMK+ G PD
Sbjct: 428 CGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDV 487
Query: 81 AAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCR 140
Y I ++C A + A DEM G SPN TY + S L + +++ R
Sbjct: 488 YTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHR 547
Query: 141 MMGTGCLPNTQSCMFLVK-LCKR---QEKVEIALQL--WNDMVEKGF----------GSY 184
M+G C PN + L+ LCK Q+ E+ +L +D +E F
Sbjct: 548 MVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPN 607
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ L + LC K+ +A M+ G +P+Q+ +
Sbjct: 608 VVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVY 646
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 97/213 (45%), Gaps = 1/213 (0%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ P++V+Y L++ CK ++V A+ +++ M P+ I Y +++ G VG+ D A+
Sbjct: 604 ISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQ 663
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+V M + G P Y + I RL A ++ +M++ +PN TY
Sbjct: 664 EVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGL 723
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ + + NL M GC PN + L+ + KV+ L+L+ M KG
Sbjct: 724 CKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNY 783
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
+ +L + C G L +A EM ++ H P
Sbjct: 784 VTYRILINHCCAAGLLDDAHLLLDEM-KQTHWP 815
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 74/160 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G +P+ + Y+ L+D +CK +++ A ++ +M P V +YTS+I + G+
Sbjct: 634 MLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGR 693
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A VL +M + C P+ Y A + C A L+ M +KG SPN TY
Sbjct: 694 LDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTA 753
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLC 160
+ + + L+ +M GC PN + L+ C
Sbjct: 754 LIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILINHC 793
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 110/271 (40%), Gaps = 44/271 (16%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKM------------------------ 36
+++ G +P V+YN L+ V QVE A+++ ++M
Sbjct: 195 LKDFGYRPSAVTYNALVQVLASAGQVEMAFRVQKEMSASGFCMDRSTVGSFAQALCKEGR 254
Query: 37 --------RDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIR 88
ED D + T +I GL ++A L M+ P+ Y +
Sbjct: 255 WGDALDLLEREDFKLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSYIPNVVTYRTLLT 314
Query: 89 NYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLP 148
+ K+L +++ M+ +G +P+ + +N + + D ++ L+ RM GC P
Sbjct: 315 GFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKLFNRMNTCGCPP 374
Query: 149 N-TQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDL--------LCDMG 199
+F+ +C R+E L D+ EK + ++ S VL + LC +G
Sbjct: 375 GYVVYNIFIGSICGREELPNPELL---DLAEKVYEEMLVASCVLNKINTANFARCLCGVG 431
Query: 200 KLVEAEKSFLEMIEKGHKPSQVSFRRIKALM 230
K +A + EM+ KG P ++ ++ +
Sbjct: 432 KFEKAFQIVKEMMRKGFVPDASTYTKVITFL 462
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/237 (18%), Positives = 87/237 (36%), Gaps = 41/237 (17%)
Query: 28 KAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAI 87
+A + +MR P+V++Y +++ G Q + ++ M GC P + +N+ +
Sbjct: 289 EAMSFLHRMRCNSYIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLV 348
Query: 88 RNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF------------------------- 122
YC A+ A L + M G P YN+F
Sbjct: 349 HTYCNAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSICGREELPNPELLDLAEKVYEEM 408
Query: 123 ----------------RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKV 166
R ++ + MM G +P+ + ++ + ++V
Sbjct: 409 LVASCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRV 468
Query: 167 EIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ A L+ +M + G + +L D C G + +A+ F EM G P+ V++
Sbjct: 469 DKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTY 525
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 85/229 (37%), Gaps = 6/229 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGL-GLVG 59
M G P +N L+ YC AYK+ +M P + Y IG + G
Sbjct: 332 MMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSICGREE 391
Query: 60 QP-----DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPN 114
P D A V +EM C + R C + A ++ EM+ KG P+
Sbjct: 392 LPNPELLDLAEKVYEEMLVASCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRKGFVPD 451
Query: 115 ATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWN 174
A+TY + + ++ L+ M G P+ + L+ + +E A ++
Sbjct: 452 ASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFD 511
Query: 175 DMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+M G ++ L +L +A F M+ P+ +++
Sbjct: 512 EMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITY 560
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 87/216 (40%), Gaps = 36/216 (16%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G P++V+Y LID K +V+ ++ +M+ + +P+ ++Y +I G
Sbjct: 739 MEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILINHCCAAGL 798
Query: 61 PD---------------------------------KARDVLKEMKEYGCYPDAAAYNAAI 87
D + +L+EM+ + P A Y I
Sbjct: 799 LDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSKRFLASLGLLEEMESHDTAPIAPVYGMLI 858
Query: 88 RNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL---FFRVFYWSNDLRSSWNLYCRMMGT 144
++ A RL A L EM+E S N + ++ + S+ + + LY M
Sbjct: 859 DSFSKAGRLETALELHKEMMEVSSSLNMASKDMHTSLIQALCLSSQVEEAVALYSEMRRR 918
Query: 145 GCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
G +P+ + + LVK + K ALQL + ++G
Sbjct: 919 GIVPDLSAFVCLVKGLIERNKWNEALQLCYGICQEG 954
Score = 37.0 bits (84), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 55/115 (47%), Gaps = 3/115 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVIS---YTSIIGGLGL 57
M P Y LID + K ++E A ++ ++M + S ++ S +TS+I L L
Sbjct: 842 MESHDTAPIAPVYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASKDMHTSLIQALCL 901
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLS 112
Q ++A + EM+ G PD +A+ ++ + +A L + ++G++
Sbjct: 902 SSQVEEAVALYSEMRRRGIVPDLSAFVCLVKGLIERNKWNEALQLCYGICQEGVN 956
>gi|255661026|gb|ACU25682.1| pentatricopeptide repeat-containing protein [Citharexylum
ligustrinum]
Length = 376
Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 102/226 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E G D +Y L+ +CK+ K+ ++E D +Y+++I G G+
Sbjct: 85 MKESGFVEDXTTYGILVHGFCKNGYNNKSLHVLEIAXQXGGVLDAFAYSAMINGXCKXGK 144
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA VL M GC + YNA I A + DA + E+ SP TYN
Sbjct: 145 XDKAVSVLNGMIXSGCKXNTHVYNALINGLXXASKFEDAIRVFKELGTXHCSPTIVTYNT 204
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+++L M+ G P+ + L+K + KVE+ALQLWN ++ KG
Sbjct: 205 LINGLCKGERFAEAYDLVKEMLEKGWXPSXITYSLLIKGLCQDHKVEMALQLWNQVISKG 264
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
F + + ++L LC +GK A + + +M P+ V+ +
Sbjct: 265 FXPDVQMHNILXHGLCSVGKTZXASELYFDMNXWNCAPNLVTHNTL 310
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 88/183 (48%), Gaps = 5/183 (2%)
Query: 1 MREMGV---KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGL 57
+E+G P IV+YN LI+ CK + +AY +V++M ++ P I+Y+ +I GL
Sbjct: 187 FKELGTXHCSPTIVTYNTLINGLCKGERFAEAYDLVKEMLEKGWXPSXITYSLLIKGLCQ 246
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
+ + A + ++ G PD +N C + AS L +M +PN T
Sbjct: 247 DHKVEMALQLWNQVISKGFXPDVQMHNILXHGLCSVGKTZXASELYFDMNXWNCAPNLVT 306
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDM 176
+N FY D+R++ ++ R++ G P+ S + L+ LC ++ +A+ D
Sbjct: 307 HNTLMEGFYKXGDIRNALVIWXRILRNGLXPDIISYNITLIGLCSCN-RISVAILFLXDA 365
Query: 177 VEK 179
V K
Sbjct: 366 VTK 368
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 96/222 (43%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G K + YN LI+ + E A ++ +++ SP +++Y ++I GL +
Sbjct: 155 MIXSGCKXNTHVYNALINGLXXASKFEDAIRVFKELGTXHCSPTIVTYNTLINGLCKGER 214
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A D++KEM E G P Y+ I+ C ++ A L ++++ KG P+ +N+
Sbjct: 215 FAEAYDLVKEMLEKGWXPSXITYSLLIKGLCQDHKVEMALQLWNQVISKGFXPDVQMHNI 274
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ LY M C PN + L++ + + AL +W ++ G
Sbjct: 275 LXHGLCSVGKTZXASELYFDMNXWNCAPNLVTHNTLMEGFYKXGDIRNALVIWXRILRNG 334
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
I+ ++ LC ++ A + + K P+ ++
Sbjct: 335 LXPDIISYNITLIGLCSCNRISVAILFLXDAVTKNIVPTVIT 376
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 102/241 (42%), Gaps = 2/241 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E + PD V YN +++ + + + + E M E S +V S+ ++ GL G+
Sbjct: 16 MAESKISPDAVVYNAMLNGXFXAGRXKBCFXLWELMXXEG-SXNVASFNXMMXGLFXNGE 74
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+ + + MKE G D Y + +C + +++ + G +A Y+
Sbjct: 75 VDZVISIWELMKESGFVEDXTTYGILVHGFCKNGYNNKSLHVLEIAXQXGGVLDAFAYSA 134
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ M+ +GC NT L+ K E A++++ ++
Sbjct: 135 MINGXCKXGKXDKAVSVLNGMIXSGCKXNTHVYNALINGLXXASKFEDAIRVFKELGTXH 194
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEAL 239
I+ + L + LC + EA EM+EKG PS +++ IK L + + AL
Sbjct: 195 CSPTIVTYNTLINGLCKGERFAEAYDLVKEMLEKGWXPSXITYSLLIKGLCQDHKVEMAL 254
Query: 240 Q 240
Q
Sbjct: 255 Q 255
Score = 37.4 bits (85), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 73/186 (39%), Gaps = 15/186 (8%)
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
G B A V KEM E PDA YNA + A R +B L + M +G S N ++
Sbjct: 4 GDIBXAERVYKEMAESKISPDAVVYNAMLNGXFXAGRXKBCFXLWELMXXEG-SXNVASF 62
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQ------EKVEIALQ 171
N + + ++ +++ M +G + + + LV CK +EIA Q
Sbjct: 63 NXMMXGLFXNGEVDZVISIWELMKESGFVEDXTTYGILVHGFCKNGYNNKSLHVLEIAXQ 122
Query: 172 LWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALME 231
+ + + I + C GK +A MI G K + + + +
Sbjct: 123 XGGVLDAFAYSAMI-------NGXCKXGKXDKAVSVLNGMIXSGCKXNTHVYNALINGLX 175
Query: 232 LANKQE 237
A+K E
Sbjct: 176 XASKFE 181
>gi|255563546|ref|XP_002522775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538013|gb|EEF39626.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1071
Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 114/224 (50%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + + P+ V+YN LID +C D E+A I+E M P+ +SY++++ GL +
Sbjct: 299 MSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMMEATGPKPNEVSYSALLNGLCRHAK 358
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ ++ +L+ M+ G AY A I C L ++ L+D+M++ G+ P+ T+++
Sbjct: 359 FELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSV 418
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEK 179
F +++ + C+M G PN+ L+ CK + VE A +++ M
Sbjct: 419 LINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCKTGDVVE-AFKVYVAMSRI 477
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G+ + + +VL LC GK+ AE F M + G+ P+ ++F
Sbjct: 478 GYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSITF 521
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 117/239 (48%), Gaps = 1/239 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G KP+ VSY+ L++ C+ + E + I+E+MR + I+YT++I GL G
Sbjct: 334 MEATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGL 393
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+++ +L +M + G PD ++ I +C ++++ ++ +M + GL+PN+ Y
Sbjct: 394 LNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTT 453
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + D+ ++ +Y M G N C LV + KV +A ++ M + G
Sbjct: 454 LIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIG 513
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEA 238
+ D + + + G ++A F EMI+ GH PS ++ +KAL +EA
Sbjct: 514 NVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEA 572
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 99/223 (44%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G P +V+YN +++ YCK + + A +++++M + I D +Y ++ L +
Sbjct: 194 MEESGYVPSVVTYNTVLNWYCKKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNR 253
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
K +LK+M++ P+ YN+ I + ++ A+ + EM L PN TYN
Sbjct: 254 SAKGYLLLKKMRKRMISPNEITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNA 313
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + M TG PN S L+ R K E++ + M G
Sbjct: 314 LIDGHCHDGNFEQALTILEMMEATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNG 373
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + D LC G L E+ K +M++ G P V+F
Sbjct: 374 MIVGCIAYTAMIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTF 416
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 107/226 (47%), Gaps = 5/226 (2%)
Query: 2 REMGVK---PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLV 58
R MG++ P + + N L+ K+R+V + ++M + PDV ++ +I L +
Sbjct: 122 RLMGIRGFNPSVYTCNMLLGKLVKERKVGAVWLFFKEMLARRVCPDVSTFNILINVLCVE 181
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
G+ KA +LK+M+E G P YN + YC R + A L+D+M KG+ +A TY
Sbjct: 182 GKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKKGRYKAALELIDQMGSKGIEADACTY 241
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
N+ +N + L +M PN + ++ ++ K+ A +++ +M
Sbjct: 242 NMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSIINGFVKEGKIGAATRIFQEMSM 301
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIE-KGHKPSQVSF 223
+ + L D C G E + LEM+E G KP++VS+
Sbjct: 302 LNLLPNCVTYNALIDGHCHDGNF-EQALTILEMMEATGPKPNEVSY 346
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 98/219 (44%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV D ++N LI YC+ +V KA+ +V M DI PD+ ++ SII L V ++
Sbjct: 795 GVAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQES 854
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+L EM E GC PD Y A + C + A L DEM G+S + R
Sbjct: 855 HLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAESALVRG 914
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + + M+ +P + L+ + R E + AL+L + M
Sbjct: 915 LAKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHMFCRNESLVEALKLKDTMDFCDVKLD 974
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ +VL LC G + A K + E+ ++G P+ ++
Sbjct: 975 VIAYNVLISGLCADGDVASALKLYKEIKQRGLWPNMTTY 1013
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 97/212 (45%), Gaps = 1/212 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++G P+ ++++C+I+ Y KA+ + ++M P +Y ++ L G+
Sbjct: 509 MSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGK 568
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A+ +L ++ D YN + + L DA L DEMV++ + P++ TY +
Sbjct: 569 FKEAKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAI 628
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCL-PNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
F + ++ + Y ++G G + P V R + + AL DM +
Sbjct: 629 IFAGLIRRGKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDMEKN 688
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEM 211
G + ++ ++V+ + MGK+ +A F M
Sbjct: 689 GLCADLIATNVILNGYSRMGKMAKAGDIFTMM 720
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 100/234 (42%), Gaps = 3/234 (1%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ P + +YN L+ Y K + + K + M I PD ++ S+I G D
Sbjct: 726 ISPSLATYNILLHGYAKKKNLSKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGL 785
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+LK+M G D +N I YC + A L++ M + P+ TT++ V
Sbjct: 786 KLLKKMLLDGVAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVL 845
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ ++ S L M+ GC+P+ + + LV R + A +L ++M G S
Sbjct: 846 SRVSTVQESHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGD 905
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
+ L L GK+ EA+ M+ K P+ +F LM + + E+L
Sbjct: 906 VAESALVRGLAKCGKVEEAKLVLDFMLRKSLIPTIATF---TTLMHMFCRNESL 956
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 78/181 (43%), Gaps = 1/181 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G PD Y L++ C+ + A+K+ ++M IS ++ ++++ GL G+
Sbjct: 861 MLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAESALVRGLAKCGK 920
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A+ VL M P A + + +C + L +A L D M + + YN+
Sbjct: 921 VEEAKLVLDFMLRKSLIPTIATFTTLMHMFCRNESLVEALKLKDTMDFCDVKLDVIAYNV 980
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPN-TQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
D+ S+ LY + G PN T C+ + + + L D+ E+
Sbjct: 981 LISGLCADGDVASALKLYKEIKQRGLWPNMTTYCILIDAIFTNDISLAKGEVLLKDLQER 1040
Query: 180 G 180
G
Sbjct: 1041 G 1041
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 88/206 (42%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ PD ++ + LI +CK ++ K+++KM + ++ D ++ +I +
Sbjct: 756 MMRTGIFPDKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTFNMLIMKYCETDE 815
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA D++ M + +PD +++ I ++++ L+ EM+E+G P+ Y
Sbjct: 816 VGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQESHLLLHEMLERGCIPDRRQYIA 875
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ L M G + LV+ + KVE A + + M+ K
Sbjct: 876 LVNRMCRMGHIHGAFKLKDEMEALGISSGDVAESALVRGLAKCGKVEEAKLVLDFMLRKS 935
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEK 206
I L + C LVEA K
Sbjct: 936 LIPTIATFTTLMHMFCRNESLVEALK 961
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/166 (20%), Positives = 71/166 (42%), Gaps = 21/166 (12%)
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
+ A+ +LK + + G + + A + Y + K N + ++L
Sbjct: 64 ENAKSILKHLSQMGV-GSKSVFGALMNTYPLCK------------------SNPSVFDLL 104
Query: 122 FRVFYWSNDLRSSWNLYCRMMGT-GCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
RV+ + + + R+MG G P+ +C L+ ++ KV + +M+ +
Sbjct: 105 IRVYLREGMVGDALETF-RLMGIRGFNPSVYTCNMLLGKLVKERKVGAVWLFFKEMLARR 163
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ ++L ++LC GKL +A +M E G+ PS V++ +
Sbjct: 164 VCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTV 209
>gi|357499119|ref|XP_003619848.1| CCP [Medicago truncatula]
gi|355494863|gb|AES76066.1| CCP [Medicago truncatula]
Length = 556
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 111/218 (50%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
VKP+IV YN +ID +CKD KA + K+ D I PD+++YTS+I G GQ + +
Sbjct: 220 VKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVK 279
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
++ EM P+ +N I +C ++ +A G+ + MV++G P+ T+N
Sbjct: 280 QLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGH 339
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
++ + L+ + G LP+ S L+ + ++++ A+ L+N+M K I
Sbjct: 340 CLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDI 399
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ L D LC G++ A + F + G P+ +++
Sbjct: 400 VLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITY 437
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 104/223 (46%), Gaps = 2/223 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV P I + + I+ YC ++ A+ ++ + P+ I+ T+++ GL + G+ KA
Sbjct: 114 GVTPSIFTLSIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKA 173
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
D + G D Y I C R DA L+ EM + + PN YN+
Sbjct: 174 MDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDS 233
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGS 183
F + +LY +++ G P+ + L++ C+ + E+ QL +MV K
Sbjct: 234 FCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVK-QLMCEMVNKNINP 292
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ +VL D C GK++EA+ F M+++G +P V+F +
Sbjct: 293 NVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTL 335
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 105/227 (46%), Gaps = 2/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + P++ ++N LID +C+ ++ +A + M PD++++ ++I G L G
Sbjct: 285 MVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGN 344
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+AR + + E G PD +Y I YC KR+ +A L +EM K + + Y+
Sbjct: 345 VLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSS 404
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEK 179
S + +W L+ + G PN + L+ CK Q+ +++ ++L+ M K
Sbjct: 405 LIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQD-IDMGIELFKLMCGK 463
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G +L ++L + C ++ EA M K P +++ +
Sbjct: 464 GLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSL 510
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 103/222 (46%), Gaps = 1/222 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G +PDIV++N LI +C V +A K+ + + + I PDV SYT +I G +
Sbjct: 320 MVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKR 379
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + EM+ D Y++ I C + R+ A L + G PN TYN+
Sbjct: 380 IDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNI 439
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F D+ L+ M G G P + L+ + +++ A+ L + M K
Sbjct: 440 LIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKN 499
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
+ + LFD LC G++ +A + F +++ G P V+
Sbjct: 500 LAPDSITYNSLFDGLCKSGRISDAWELF-KVMHVGGPPVDVA 540
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 91/194 (46%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E G+ PD+ SY LI YCK +++++A + +MR +++ D++ Y+S+I GL G+
Sbjct: 357 ERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRIS 416
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
A ++ + G P+ YN I +C + + L M KGL+P TYN+
Sbjct: 417 YAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILI 476
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
+ S +R + NL M P++ + L + ++ A +L+ M G
Sbjct: 477 NGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPP 536
Query: 183 SYILVSDVLFDLLC 196
+ +VL D C
Sbjct: 537 VDVATYNVLLDAFC 550
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 102/219 (46%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G +P+ ++ ++ C + +V+KA + + + + D + Y ++I GL +G+ A
Sbjct: 149 GYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDA 208
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+L+EM+ P+ YN I ++C + A L ++V+ G+ P+ TY R
Sbjct: 209 FQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRG 268
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
F + L C M+ PN + L+ R+ K+ A ++N MV++G
Sbjct: 269 FCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPD 328
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I+ + L C G ++EA K F + E+G P S+
Sbjct: 329 IVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSY 367
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 64/127 (50%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G P++++YN LID +CK + ++ ++ + M + ++P V++Y +I G + +A
Sbjct: 429 GPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREA 488
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++L M+ PD+ YN+ C + R+ DA L M G + TYN+
Sbjct: 489 MNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLLDA 548
Query: 125 FYWSNDL 131
F + D+
Sbjct: 549 FCKAQDV 555
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 38/202 (18%), Positives = 87/202 (43%), Gaps = 2/202 (0%)
Query: 26 VEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNA 85
++ A + + + P VI + +IIG + + A +LK+M G P +
Sbjct: 65 IDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSI 124
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
I YC + A ++ ++++G PN T + + +++ + + + + G
Sbjct: 125 WINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQG 184
Query: 146 CLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEA 204
L + L+ LCK ++ A QL +M + I++ +++ D C +A
Sbjct: 185 MLLDEVCYGTLINGLCKIGRSID-AFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKA 243
Query: 205 EKSFLEMIEKGHKPSQVSFRRI 226
+L++++ G P +++ +
Sbjct: 244 RDLYLKIVDMGIDPDILTYTSL 265
>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
[Arabidopsis thaliana]
gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 606
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 114/227 (50%), Gaps = 4/227 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCK---DRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGL 57
M+ G P++VSYN LID YCK + ++ KA ++++M + D+SP++ ++ +I G
Sbjct: 249 MKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWK 308
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
+ V KEM + P+ +YN+ I C ++ +A + D+MV G+ PN T
Sbjct: 309 DDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLIT 368
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
YN F ++ L+ + +++ + G G +P T+ L+ + K++ L +M
Sbjct: 369 YNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEME 428
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
+G + + L LC G + A+K F ++ KG P V+F
Sbjct: 429 REGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFH 474
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 111/225 (49%), Gaps = 5/225 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E V P++ ++N LID + KD + + K+ ++M D+D+ P+VISY S+I GL G+
Sbjct: 287 MVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGK 346
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + +M G P+ YNA I +C L++A + + +G P YN+
Sbjct: 347 ISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNM 406
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPN--TQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
+ + + L M G +P+ T +C+ + LC R +E A +L++ +
Sbjct: 407 LIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCL-IAGLC-RNGNIEAAKKLFDQLTS 464
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
KG ++ +L + C G+ +A EM + G KP +++
Sbjct: 465 KGLPD-LVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTY 508
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 96/197 (48%), Gaps = 6/197 (3%)
Query: 26 VEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNA 85
VE YK +M I P+V ++ +I L G+ +KARDV+++MK YGC P+ +YN
Sbjct: 207 VEYVYK---EMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNT 263
Query: 86 AIRNYCI---AKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMM 142
I YC ++ A ++ EMVE +SPN TT+N+ F+ ++L S ++ M+
Sbjct: 264 LIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEML 323
Query: 143 GTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLV 202
PN S L+ K+ A+ + + MV G ++ + L + C L
Sbjct: 324 DQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLK 383
Query: 203 EAEKSFLEMIEKGHKPS 219
EA F + +G P+
Sbjct: 384 EALDMFGSVKGQGAVPT 400
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 105/215 (48%), Gaps = 2/215 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
++ G P YN LID YCK +++ + + E+M E I PDV +Y +I GL G
Sbjct: 392 VKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGN 451
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A+ + ++ G PD ++ + YC R A+ L+ EM + GL P TYN+
Sbjct: 452 IEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNI 510
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLP-NTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ + +L+++ N+ +M L N S L++ ++ K+E A L N+M+EK
Sbjct: 511 VMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEK 570
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEK 214
G + +++ + + D G + + E + K
Sbjct: 571 GLVPNRITYEIVKEEMVDQGFVPDIEGHLFNVSTK 605
>gi|225424625|ref|XP_002282301.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial [Vitis vinifera]
gi|296081374|emb|CBI16807.3| unnamed protein product [Vitis vinifera]
Length = 519
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 127/272 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G +PD+V+YN L++ C + +E+A +++KM + PDV SY ++ GL +
Sbjct: 245 MRRNGCEPDLVTYNVLLNYCCDELLLEEAENLMKKMERSGVEPDVYSYNELLKGLCKANR 304
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA ++ E D +YN I+ C A + A L +EM KG++P+ T+ +
Sbjct: 305 LDKAYMMMVNKMEAKGLCDVVSYNTIIKALCTASHTKRAYKLFEEMGGKGITPDVVTFTI 364
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ F + L +M G G LP+ +V + K+ +A ++ DMVE G
Sbjct: 365 LIKAFLREGSSNIAKKLLDQMTGLGLLPDRVLYTTIVDHLCKTGKMGMAHSVFCDMVESG 424
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
++ + L + LC ++ EA + +M G P +V+F+ I + K
Sbjct: 425 ITPDVVSYNALINGLCRASRVSEAMHLYEDMHTGGPCPDEVTFKLIIGGLIWEKKLSVAC 484
Query: 241 NLSNKMALFGPSMIPKREEYLAEMSASDSFSC 272
+ ++M G ++ E L S+ SC
Sbjct: 485 RVWDQMMEKGFTLDGAVSETLVNAIHSNDASC 516
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 115/240 (47%), Gaps = 2/240 (0%)
Query: 13 YNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMK 72
YN LI+ +C+ ++KA I+ MR PD+++Y ++ ++A +++K+M+
Sbjct: 222 YNSLINGFCQAGWIDKAQSIISFMRRNGCEPDLVTYNVLLNYCCDELLLEEAENLMKKME 281
Query: 73 EYGCYPDAAAYNAAIRNYCIAKRLRDASGLM-DEMVEKGLSPNATTYNLFFRVFYWSNDL 131
G PD +YN ++ C A RL A +M ++M KGL + +YN + ++
Sbjct: 282 RSGVEPDVYSYNELLKGLCKANRLDKAYMMMVNKMEAKGLC-DVVSYNTIIKALCTASHT 340
Query: 132 RSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVL 191
+ ++ L+ M G G P+ + L+K R+ IA +L + M G ++ +
Sbjct: 341 KRAYKLFEEMGGKGITPDVVTFTILIKAFLREGSSNIAKKLLDQMTGLGLLPDRVLYTTI 400
Query: 192 FDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFGP 251
D LC GK+ A F +M+E G P VS+ + + A++ +L M GP
Sbjct: 401 VDHLCKTGKMGMAHSVFCDMVESGITPDVVSYNALINGLCRASRVSEAMHLYEDMHTGGP 460
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 125/299 (41%), Gaps = 45/299 (15%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G PDI +YN +++ C + Q++ A +V+ M ++ PD+++YT +I GL G+
Sbjct: 105 MDRLGYVPDIWAYNIYLNLLCCENQLDVALGVVQTMVEKGREPDIVTYTIVINGLCRAGR 164
Query: 61 PDKARDVLKEMKEYGCYPDAAA-----------------------------------YNA 85
D A ++ + M G PD A YN+
Sbjct: 165 FDSAVEIWRNMVRKGFSPDEKACRALVLGLCHDGKVDLAYELTVGAMRGRIKFSKSIYNS 224
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
I +C A + A ++ M G P+ TYN+ L + NL +M +G
Sbjct: 225 LINGFCQAGWIDKAQSIISFMRRNGCEPDLVTYNVLLNYCCDELLLEEAENLMKKMERSG 284
Query: 146 CLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEA 204
P+ S L+K LCK + + + N M KG ++ + + LC A
Sbjct: 285 VEPDVYSYNELLKGLCKANRLDKAYMMMVNKMEAKGLCD-VVSYNTIIKALCTASHTKRA 343
Query: 205 EKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEALQNLSNKM--ALFGPSMIPKREEY 260
K F EM KG P V+F IKA + +E N++ K+ + G ++P R Y
Sbjct: 344 YKLFEEMGGKGITPDVVTFTILIKAFL-----REGSSNIAKKLLDQMTGLGLLPDRVLY 397
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 92/213 (43%)
Query: 11 VSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKE 70
+ YN I V + + + A + ++M + S + +Y+ I GL V +L++
Sbjct: 45 IDYNRFIGVLVRQSRFDLAEQYYDRMIPQGFSLNSFTYSRFISGLCKVKNFVLIEKLLED 104
Query: 71 MKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSND 130
M G PD AYN + C +L A G++ MVEKG P+ TY + +
Sbjct: 105 MDRLGYVPDIWAYNIYLNLLCCENQLDVALGVVQTMVEKGREPDIVTYTIVINGLCRAGR 164
Query: 131 LRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDV 190
S+ ++ M+ G P+ ++C LV KV++A +L + + +
Sbjct: 165 FDSAVEIWRNMVRKGFSPDEKACRALVLGLCHDGKVDLAYELTVGAMRGRIKFSKSIYNS 224
Query: 191 LFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
L + C G + +A+ M G +P V++
Sbjct: 225 LINGFCQAGWIDKAQSIISFMRRNGCEPDLVTY 257
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 47/114 (41%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G + +Y+ I CK + K++E M PD+ +Y + L Q
Sbjct: 70 MIPQGFSLNSFTYSRFISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLNLLCCENQ 129
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPN 114
D A V++ M E G PD Y I C A R A + MV KG SP+
Sbjct: 130 LDVALGVVQTMVEKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPD 183
>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
gi|224033903|gb|ACN36027.1| unknown [Zea mays]
Length = 655
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 102/200 (51%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
D V++N L+D +C++ V++ +++E+M + PDVI+YT++I G G D+A +L
Sbjct: 366 DDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLL 425
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
K M GC P+ +Y ++ C A+R DA LM +M+++G N T+N
Sbjct: 426 KSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKK 485
Query: 129 NDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVS 188
+ + L +M+ GC P+ S ++ + K + AL+L N MV KG ++
Sbjct: 486 GLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIY 545
Query: 189 DVLFDLLCDMGKLVEAEKSF 208
+ L G++ + + F
Sbjct: 546 SSIASALSREGRINKVIQMF 565
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 109/226 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M M P+IV++N LI C++ E+ ++++ +M + +PD+ Y +II G+ G
Sbjct: 253 MVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGH 312
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A ++L M YG P+ YN ++ C A+R + L+ EM +K + T+N+
Sbjct: 313 LEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNI 372
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + + L +M+ GC+P+ + ++ ++ ++ A+ L M G
Sbjct: 373 LVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACG 432
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ ++ LC + V+AE +MI++G + ++F +
Sbjct: 433 CKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTL 478
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 99/223 (44%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P Y+ +++ C+ A +++E + + DV + ++ + G
Sbjct: 148 MPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGS 207
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A +L+++ +GC PD +YNA ++ C+AKR LM+EMV PN T+N
Sbjct: 208 VDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNT 267
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + +M+ GC P+ + ++ ++ +E+A ++ N M G
Sbjct: 268 LISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYG 327
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + L LC + E E+ EM +K V+F
Sbjct: 328 LKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTF 370
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 97/219 (44%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G +PD+VSYN ++ C ++ +++E+M P+++++ ++I L G ++
Sbjct: 222 GCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERV 281
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+VL +M E+GC PD Y I C L A +++ M GL PN YN +
Sbjct: 282 HEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKG 341
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + L M C + + LV + V+ ++L M+E+G
Sbjct: 342 LCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPD 401
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + + C G + EA M G KP+ +S+
Sbjct: 402 VITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISY 440
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 116/252 (46%), Gaps = 4/252 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G PD+++Y +I+ +CK+ +++A +++ M P+ ISYT ++ GL +
Sbjct: 393 MLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAER 452
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A D++ +M + GC + +N I C + A L+ +M+ G SP+ +Y+
Sbjct: 453 WVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYST 512
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + L M+ G PNT + R+ ++ +Q+++++ +
Sbjct: 513 VIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTT 572
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF----RRIKALMELANKQ 236
S ++ + + LC G+ A + M+ G P++ ++ R + + + Q
Sbjct: 573 IRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQ 632
Query: 237 EALQNLSNKMAL 248
E L L +K AL
Sbjct: 633 EMLTELCSKGAL 644
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 94/222 (42%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G D+ + N +++ C V++A ++ + PDV+SY +++ GL + +
Sbjct: 187 GCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCV 246
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+++++EM C P+ +N I C ++ +MVE G +P+ Y
Sbjct: 247 QELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDG 306
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
L + + RM G PN L+K E+ E +L +M +K
Sbjct: 307 ICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLD 366
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ ++L D C G + + +M+E+G P +++ +
Sbjct: 367 DVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTV 408
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 97/241 (40%), Gaps = 9/241 (3%)
Query: 13 YNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMK 72
YN ++ YC+ Q+E A ++ + + P+ +Y ++ L G+ A VL EM
Sbjct: 93 YNAMVAGYCRAGQLESARRLAAAV---PVPPNAYTYFPVVRALCARGRIADALAVLDEMP 149
Query: 73 EYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLR 132
GC P Y+ + C R A +++++ +G + + NL +
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209
Query: 133 SSWNLYCRMMGTGCLPNTQSCMFLVK-LC--KRQEKVEIALQLWNDMVEKGFGSYILVSD 189
+ +L + GC P+ S ++K LC KR V+ +L +MV I+ +
Sbjct: 210 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQ---ELMEEMVRMACPPNIVTFN 266
Query: 190 VLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALF 249
L LC G + +M+E G P + I + E + N+M +
Sbjct: 267 TLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSY 326
Query: 250 G 250
G
Sbjct: 327 G 327
>gi|32489924|emb|CAE05516.1| OSJNBa0038P21.9 [Oryza sativa Japonica Group]
Length = 825
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 108/223 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+ P++V+Y+ LI+ CK ++++KA +++ +M + P+ ++Y +I G G
Sbjct: 250 MEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGM 309
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++ V KEM PD N+ + C R+++A + D MV KG P+ +Y
Sbjct: 310 WKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGA 369
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + NL+ M+ G +P+ L+ R ++ +L ++ DM ++G
Sbjct: 370 LLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQG 429
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I+ + C +G+L +A + F MI+ G P +
Sbjct: 430 VNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVY 472
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 104/220 (47%), Gaps = 2/220 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P I +YN LI+ Y + R+ + + ++ + PDV SY ++I G G+ DKA D+
Sbjct: 187 PTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDL 246
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
+M+E G P+ Y++ I C K + A ++ +MV G+ PN TYN +
Sbjct: 247 FYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYST 306
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSC-MFLVKLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
S + S ++ M + +P+ +C F+ LCK +++ A +++ MV KG ++
Sbjct: 307 SGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCK-HGRIKEARDIFDSMVLKGPKPDVI 365
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
L G + + F M+ +G P + F +
Sbjct: 366 SYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTL 405
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 105/226 (46%), Gaps = 3/226 (1%)
Query: 1 MREM---GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGL 57
+R+M GV+P+ ++YNCLI Y +++ ++ ++M + PDV + S + L
Sbjct: 282 LRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCK 341
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
G+ +ARD+ M G PD +Y A + Y A + L + MV +G+ P+
Sbjct: 342 HGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHV 401
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
+N + + S ++ M G P+ + ++ R +++ A++ +N M+
Sbjct: 402 FNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMI 461
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ G V L C+ LV+A++ +M+ KG P + F
Sbjct: 462 DTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKF 507
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 101/216 (46%), Gaps = 1/216 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV PDI++++ +I +C+ +++ A + M D + PD Y+ +I G
Sbjct: 425 MTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRD 484
Query: 61 PDKARDVLKEMKEYGCYPDAAA-YNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
KA++++ +M G P + + I N C R+ + ++D ++ G PN T+N
Sbjct: 485 LVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFN 544
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ +++ + L M G P+ + LV + +++ AL L+ DM+ K
Sbjct: 545 SLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHK 604
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
+ +++ L + + A++ F EMIE G
Sbjct: 605 RVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESG 640
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 106/261 (40%), Gaps = 38/261 (14%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISP----------------- 43
M + GV PD Y+CLI C R + KA +++ M + I P
Sbjct: 460 MIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEG 519
Query: 44 -------------------DVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYN 84
++I++ S++ G LVG +A +L M+ G PD YN
Sbjct: 520 RVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYN 579
Query: 85 AAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGT 144
+ YC R+ DA L +M+ K ++ + +YN+ + + + ++ M+ +
Sbjct: 580 TLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIES 639
Query: 145 GCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVE 203
G + + L LC R + A L + IL +++ + +G+ E
Sbjct: 640 GMAVSIHTYATVLGGLC-RNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQE 698
Query: 204 AEKSFLEMIEKGHKPSQVSFR 224
A++ F + G P+ +++R
Sbjct: 699 AKELFAAISTYGLVPTILTYR 719
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/269 (20%), Positives = 116/269 (43%), Gaps = 11/269 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +GV+PDI +YN L+D YCK +++ A + M + ++ +SY I+ GL +
Sbjct: 566 MESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARR 625
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A+++ EM E G Y + C +A+ L++++ + + T+N+
Sbjct: 626 TIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNI 685
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
R + + + L+ + G +P + ++ ++E E A L++ M +
Sbjct: 686 VIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSS 745
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ + + +L + G++ +A ++ +KG P + + L + K
Sbjct: 746 CTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYI 805
Query: 241 NLSNKMALFGPSMIPKREEYLAEMSASDS 269
L +P++ +L E +A D+
Sbjct: 806 KL-----------LPEKYRFLREQAAVDN 823
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 97/238 (40%), Gaps = 16/238 (6%)
Query: 30 YKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRN 89
+K +++ + +P + +Y +I +PD V + G PD +YNA I
Sbjct: 174 FKRMDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDG 233
Query: 90 YCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPN 149
+ + A L +M E+G+ PN TY+ + ++ + + +M+G G PN
Sbjct: 234 FSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPN 293
Query: 150 TQSCMFLVKLCKRQEKVEIALQLWNDMVE--KGFGSYILVSDV-----LFDLLCDMGKLV 202
+ L+ +W + V K S +LV DV LC G++
Sbjct: 294 NMTYNCLIHGYSTS-------GMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIK 346
Query: 203 EAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFGPSMIPKREEY 260
EA F M+ KG KP +S+ + A + NL N M G ++P R +
Sbjct: 347 EARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEG--VVPDRHVF 402
>gi|15237375|ref|NP_199422.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171880|sp|Q9FNL2.1|PP418_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g46100
gi|9757730|dbj|BAB08255.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|332007954|gb|AED95337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 472
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 107/225 (47%), Gaps = 3/225 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCK-DRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVG 59
MRE+G+ P + S N LI C+ D V+ KI +M PD +Y ++I GL G
Sbjct: 147 MREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFG 206
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ D+A+ + EM E C P Y + I C +K + +A ++EM KG+ PN TY+
Sbjct: 207 RIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYS 266
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVE 178
+ L+ MM GC PN + L+ LCK Q K++ A++L + M
Sbjct: 267 SLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQ-KIQEAVELLDRMNL 325
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+G + + C + K EA EMI G P+++++
Sbjct: 326 QGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTW 370
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 99/187 (52%), Gaps = 8/187 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G++P++ +Y+ L+D CKD + +A ++ E M P++++YT++I GL +
Sbjct: 253 MKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQK 312
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++L M G PDA Y I +C + R+A+ +DEM+ G++PN T+N+
Sbjct: 313 IQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNI 372
Query: 121 FFRVF------YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLW 173
+ +N ++ LY M G ++ LVK LCK+ E + A+QL
Sbjct: 373 HVKTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGE-FQKAVQLV 431
Query: 174 NDMVEKG 180
+++V G
Sbjct: 432 DEIVTDG 438
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 108/232 (46%), Gaps = 10/232 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E P +V+Y LI+ C + V++A + +E+M+ + I P+V +Y+S++ GL G+
Sbjct: 218 MVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGR 277
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++ + M GC P+ Y I C +++++A L+D M +GL P+A Y
Sbjct: 278 SLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGK 337
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK--------LCKRQEKVEIALQL 172
F + R + N M+ G PN + VK LC A L
Sbjct: 338 VISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYPSR--AFTL 395
Query: 173 WNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
+ M +G + + L LC G+ +A + E++ G PS+ +++
Sbjct: 396 YLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWK 447
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 104/252 (41%), Gaps = 38/252 (15%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLV-G 59
M++ P +Y ++ + ++ Q+ A+K + MR+ + P V S +I L G
Sbjct: 112 MKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDG 171
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
D + EM + GC PD+ Y I C R+ +A L EMVEK +P TY
Sbjct: 172 TVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYT 231
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
N L S N V+ A++ +M K
Sbjct: 232 SLI------NGLCGSKN-----------------------------VDEAMRYLEEMKSK 256
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEA 238
G + L D LC G+ ++A + F M+ +G +P+ V++ I L + QEA
Sbjct: 257 GIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEA 316
Query: 239 LQNLSNKMALFG 250
++ L ++M L G
Sbjct: 317 VE-LLDRMNLQG 327
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 99/222 (44%), Gaps = 5/222 (2%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDED--ISPDVISYTSIIGGLGLVGQPD 62
G D S+ ++ + + A ++ +M+ E+ +S D++ SI G G V +P
Sbjct: 46 GYVHDQSSFGYMVLRLVSANKFKAAEDLIVRMKIENCVVSEDIL--LSICRGYGRVHRPF 103
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
+ V +MK++ C P AY + +L A M E GL P + N+
Sbjct: 104 DSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLI 163
Query: 123 RVFYWSN-DLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
+ ++ + + ++ M GC P++ + L+ R +++ A +L+ +MVEK
Sbjct: 164 KALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDC 223
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ L + LC + EA + EM KG +P+ ++
Sbjct: 224 APTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTY 265
>gi|224123682|ref|XP_002319140.1| predicted protein [Populus trichocarpa]
gi|222857516|gb|EEE95063.1| predicted protein [Populus trichocarpa]
Length = 296
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 126/245 (51%), Gaps = 19/245 (7%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G++ D+VSY ++ Y K + + ++ ++M+ I PD Y ++I L
Sbjct: 1 MSKRGIRFDVVSYASMMSCYSKAGSLYRVLRLYKQMKKIGIEPDRKVYNAVIHALAKGRL 60
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A +++K M+E G P+ YN+ I+ C A+++ +A G D+M+++ +SP TY+
Sbjct: 61 VNEAFNLMKTMEEKGVAPNIVTYNSLIKPLCRARKVEEAKGAFDDMLKRCISPTIRTYHA 120
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLP-NTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
F R+ ++ + L +M GC P N M + K C R ++E +LW++M E
Sbjct: 121 FLRILRTGEEV---FALLEKMRKMGCQPINDTYIMLIRKFC-RWRQLENVFKLWDEMSEN 176
Query: 180 GF----GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALME--LA 233
G SYI++ LF G+L A K + EM EK P +I +++ L+
Sbjct: 177 GISPDRSSYIVLIHGLF----LNGELDAAHKYYTEMKEKQLLPEP----KIDEMLQTWLS 228
Query: 234 NKQEA 238
NKQ A
Sbjct: 229 NKQIA 233
Score = 37.4 bits (85), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 59/145 (40%), Gaps = 3/145 (2%)
Query: 106 MVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEK 165
M ++G+ + +Y + + L LY +M G P+ + ++ +
Sbjct: 1 MSKRGIRFDVVSYASMMSCYSKAGSLYRVLRLYKQMKKIGIEPDRKVYNAVIHALAKGRL 60
Query: 166 VEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR 225
V A L M EKG I+ + L LC K+ EA+ +F +M+++ P + R
Sbjct: 61 VNEAFNLMKTMEEKGVAPNIVTYNSLIKPLCRARKVEEAKGAFDDMLKRCISP---TIRT 117
Query: 226 IKALMELANKQEALQNLSNKMALFG 250
A + + E + L KM G
Sbjct: 118 YHAFLRILRTGEEVFALLEKMRKMG 142
>gi|326506436|dbj|BAJ86536.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 616
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 93/179 (51%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
D V++N L+D +C++ V++ +++E+M + PDVI+YT++I G G D+A +L
Sbjct: 327 DDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLL 386
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
K M GC P+ +Y ++ C A+R DA L+ M+++G PN T+N
Sbjct: 387 KNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKK 446
Query: 129 NDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ L +M+ GC P+ S ++ + K E AL+L N M+ KG ++
Sbjct: 447 GLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTII 505
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 112/246 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G PD+ Y +ID CKD E A I+ +M + P+V+ Y +++ GL +
Sbjct: 249 MPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAER 308
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A D+L EM + C D +N + +C + L+++M+E G P+ TY
Sbjct: 309 WEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTT 368
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + + L M GC PNT S ++K R E+ A +L + M+++G
Sbjct: 369 VINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQG 428
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ + L + +C G +A + +M+ G P +S+ + + A K E
Sbjct: 429 CLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEAL 488
Query: 241 NLSNKM 246
L N M
Sbjct: 489 ELLNVM 494
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 105/230 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+KP++V YN ++ C + E+A ++ +M ED D +++ ++ G
Sbjct: 284 MPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGL 343
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+ ++L++M E+GC PD Y I +C + +A L+ M G PN +Y +
Sbjct: 344 VDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTI 403
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + L M+ GCLPN + L+ ++ E A++L M+ G
Sbjct: 404 VLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNG 463
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALM 230
++ + D L GK EA + MI KG P+ + + + + +
Sbjct: 464 CSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASAL 513
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 112/236 (47%), Gaps = 10/236 (4%)
Query: 5 GVKPDIVSYNCLIDVYCKDR----------QVEKAYKIVEKMRDEDISPDVISYTSIIGG 54
G +PDIVSYN ++ C + ++ + ++ + +M + +PD+ Y +II G
Sbjct: 208 GCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDG 267
Query: 55 LGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPN 114
+ G + A D+L M YG P+ YN ++ C A+R +A L+ EM ++ +
Sbjct: 268 ICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLD 327
Query: 115 ATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWN 174
T+N+ F + + L +M+ GC+P+ + ++ ++ V+ A+ L
Sbjct: 328 DVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLK 387
Query: 175 DMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALM 230
+M G + ++ LC + V+A++ MI++G P+ V+F + M
Sbjct: 388 NMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFM 443
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 86/181 (47%), Gaps = 4/181 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G P+ V++N LI+ CK E+A +++++M SPD+ISY+++I GLG G+
Sbjct: 424 MIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGK 483
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A ++L M G P+ Y++ R + D + + + +A YN
Sbjct: 484 TEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNA 543
Query: 121 FFRVF--YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
W D + + + M+ GC+PN + L++ + V A L +++
Sbjct: 544 VISSLCKRWETD--RAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSELCS 601
Query: 179 K 179
+
Sbjct: 602 R 602
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 93/221 (42%), Gaps = 10/221 (4%)
Query: 16 LIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYG 75
+++ C+ A + ++ + + + D + ++ + G D+ ++L+++ +G
Sbjct: 149 ILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFG 208
Query: 76 CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMV----------EKGLSPNATTYNLFFRVF 125
C PD +YNA ++ C+AKR D LM EMV E G +P+ Y
Sbjct: 209 CEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGI 268
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ ++ RM G PN ++K E+ E A L +M ++
Sbjct: 269 CKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDD 328
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ ++L D C G + + +M+E G P +++ +
Sbjct: 329 VTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTV 369
Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 97/252 (38%), Gaps = 13/252 (5%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G +V+YN +I YC+ QV A ++ + + P+ +Y I+ L G A
Sbjct: 71 GDAAGVVAYNAMIAGYCRAGQVAAARRLAAAV---PVPPNAYTYFPIVRSLCARGLIADA 127
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
VL EM GC + + C R A + + KG + ++ NL
Sbjct: 128 LTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSA 187
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LC--KRQEKVEIAL-------QLWN 174
+ L ++ GC P+ S ++K LC KR + VE + + +
Sbjct: 188 ICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVHEALS 247
Query: 175 DMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELAN 234
M E G + + + D +C G A M G KP+ V + + + A
Sbjct: 248 QMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAE 307
Query: 235 KQEALQNLSNKM 246
+ E ++L +M
Sbjct: 308 RWEEAEDLLAEM 319
>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
Length = 624
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 115/248 (46%), Gaps = 2/248 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G++PD+V Y LID CK + +KA+ +++ M + P+V++Y +I + G
Sbjct: 211 MSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGS 270
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKG--LSPNATTY 118
+A VLK+M E G PD YN I+ + +A L++EMV + PN T+
Sbjct: 271 VKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTF 330
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
N + +R ++ + M TGC+ N + L+ R KV A++L ++M
Sbjct: 331 NSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTS 390
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEA 238
G +L C M ++ AE M ++G +P + + M E
Sbjct: 391 LGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMER 450
Query: 239 LQNLSNKM 246
+NL N+M
Sbjct: 451 ARNLFNEM 458
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 126/256 (49%), Gaps = 10/256 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR GV+ D+V+Y LI C +V+KA +++ +M + I P+V+ Y+S++ G G+
Sbjct: 141 MRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGR 200
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ V EM E G PD Y I + C + + A G+MD MV +GL PN TYN+
Sbjct: 201 WEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNV 260
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++ + + +M G P+ + L+K +++ A+ L +MV
Sbjct: 261 LINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVR-- 318
Query: 181 FGSYILVSDV-----LFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELAN 234
G I+ +V + LCD+G++ +A + M E G + V++ I L+ +
Sbjct: 319 -GKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHK 377
Query: 235 KQEALQNLSNKMALFG 250
++A++ L ++M G
Sbjct: 378 VRKAME-LMDEMTSLG 392
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 114/237 (48%), Gaps = 3/237 (1%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
+P+ VSY L+ C DR ++A ++ MR + DV++Y ++I GL + DKA +
Sbjct: 112 RPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVE 171
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
++ EM E G P+ Y++ ++ YC + R D + EM EKG+ P+ Y
Sbjct: 172 LMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLC 231
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+ + + M+ G PN + L+ ++ V+ A+ + M EKG ++
Sbjct: 232 KVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVV 291
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGH--KPSQVSFRR-IKALMELANKQEALQ 240
+ L L D+ ++ EA EM+ + KP+ V+F I+ L ++ ++A Q
Sbjct: 292 TYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQ 348
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 98/216 (45%), Gaps = 34/216 (15%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G ++V+YN LI + +V KA +++++M + PD +Y+ +I G + Q
Sbjct: 353 MEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQ 412
Query: 61 PDKARDVLKEMKEYGCYP----------------------------------DAAAYNAA 86
D+A D+L M++ G P D AY+
Sbjct: 413 VDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDNNFPLDVVAYSTM 472
Query: 87 IRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGC 146
I C A L+ A L+ +V++GL+P+A TY++ +F S D+ ++ + +M +G
Sbjct: 473 IHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGF 532
Query: 147 LPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
LP+ L++ + ++ L+L +M+ K
Sbjct: 533 LPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIA 568
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 96/218 (44%), Gaps = 1/218 (0%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
VKP++V++N +I C ++ +A+++ M + ++++Y +IGGL V + KA
Sbjct: 323 VKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAM 382
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+++ EM G PD+ Y+ I+ +C ++ A L+ M ++G+ P Y
Sbjct: 383 ELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAM 442
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ + NL+ M L + CK + ++ A +L +V++G
Sbjct: 443 CEQGMMERARNLFNEMDNNFPLDVVAYSTMIHGACKAGD-LKTAKELLKSIVDEGLTPDA 501
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ ++ ++ G + A +M G P F
Sbjct: 502 VTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVF 539
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 90/218 (41%), Gaps = 38/218 (17%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDED---ISPDVISYTSIIGGLGLVGQPDKAR 65
D VSYN ++ C+ ++A ++ M E P+ +SYT ++ L D+A
Sbjct: 76 DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAV 135
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+L+ M+ G D Y IR C A + A LM EM E G+ PN Y+ +
Sbjct: 136 GLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQG- 194
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
YC+ R E V +++ +M EKG +
Sbjct: 195 ------------YCK-------------------SGRWEDVG---KVFVEMSEKGIEPDV 220
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ L D LC +GK +A M+ +G +P+ V++
Sbjct: 221 VMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTY 258
>gi|302825350|ref|XP_002994298.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
gi|300137829|gb|EFJ04642.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
Length = 577
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 120/258 (46%), Gaps = 35/258 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR +G P++V+Y+ LID CK +V++AY ++ +++ ED+ P + Y +++ G G+
Sbjct: 134 MRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMYYNAVVNGFKRQGK 193
Query: 61 PDKARDVLKEMKEYG------------------------CY-----------PDAAAYNA 85
P + ++L MKE G C P+ YN
Sbjct: 194 PSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNV 253
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
A+ C A ++ +A ++ EMVE ++P+ TY+ F + + + +++ RMM
Sbjct: 254 AVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHE 313
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
C+P+ + M L+ +K A ++ DMV GF + +VL D +C + A
Sbjct: 314 CIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESAL 373
Query: 206 KSFLEMIEKGHKPSQVSF 223
+ + +M K +P ++
Sbjct: 374 EIYHKMKRKKRQPDANTY 391
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 111/219 (50%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G +PD++SY+ +ID CK ++V+KAY+ ++MR +P+V++Y+S+I GL V + D+A
Sbjct: 103 GCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEA 162
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+L ++K P A YNA + + + + L+ M EKG N +N
Sbjct: 163 YSLLMQLKGEDMVPRAMYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHA 222
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ +++ + + R++ +G PN + V + KV+ A ++ +MVE
Sbjct: 223 LWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPD 282
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + D C G++ +A+ F M+ P V+F
Sbjct: 283 VITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTF 321
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 101/200 (50%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G KP++V+YN + CK +V++AY+I+ +M + ++PDVI+Y+SII G G+ DKA
Sbjct: 243 GKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKA 302
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
DV M + C P + + + K+ R+A + ++MV G P TYN+
Sbjct: 303 DDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDC 362
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
++ + S+ +Y +M P+ + L++ R +V+ A + + M
Sbjct: 363 VCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPN 422
Query: 185 ILVSDVLFDLLCDMGKLVEA 204
+ L ++LC G++ EA
Sbjct: 423 GAICHALVEVLCKQGEVDEA 442
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 115/228 (50%), Gaps = 6/228 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E GVK D++ ++ LI C+ ++++A + + M E+ SP+VI+Y +++ GL +
Sbjct: 25 MKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSM-GEECSPNVITYNTVVNGLCKANR 83
Query: 61 PDKARDVLKEMKE-----YGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNA 115
D+ ++ +M++ +GC PD +Y+ I C A+R+ A M G +PN
Sbjct: 84 IDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNV 143
Query: 116 TTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWND 175
TY+ + + +++L ++ G +P +V KRQ K L+L
Sbjct: 144 VTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMYYNAVVNGFKRQGKPSECLELLLH 203
Query: 176 MVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
M EKGFG I+ + + L + +A + F +++ G KP+ V++
Sbjct: 204 MKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTY 251
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 99/213 (46%), Gaps = 1/213 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E G +I+ +N ++ K+ + EKA + E++ P+V++Y + GL G+
Sbjct: 204 MKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGK 263
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A +L EM E PD Y++ I +C A R+ A + M+ P+ T+
Sbjct: 264 VDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMT 323
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F R ++ ++ M+ G +P Q+ L+ + VE AL++++ M K
Sbjct: 324 LLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKK 383
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIE 213
L LC ++ EA K FL+++E
Sbjct: 384 RQPDANTYAPLIQCLCRARRVDEA-KEFLDVME 415
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 87/218 (39%), Gaps = 19/218 (8%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P + +YN L+D C VE A +I KM+ + PD +Y +I L +
Sbjct: 344 MVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARR 403
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVE------------ 108
D+A++ L M+ P+ A +A + C + +A ++D +VE
Sbjct: 404 VDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEICKAGEPDEAVE 463
Query: 109 -------KGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCK 161
KG+ P+ TY R + + S+ + +M GC P + L+
Sbjct: 464 VIEQMVLKGVRPDEATYVAVLRSLCGLDRVDSAIAEFEKMASRGCAPGLVTYTLLIGEAC 523
Query: 162 RQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMG 199
+ + A +++ MV GF L L D G
Sbjct: 524 SADMADDAFRIFEAMVAAGFTPQAQTMRTLSSCLRDAG 561
>gi|224123678|ref|XP_002319139.1| predicted protein [Populus trichocarpa]
gi|222857515|gb|EEE95062.1| predicted protein [Populus trichocarpa]
Length = 518
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 126/244 (51%), Gaps = 17/244 (6%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G++ D+VSY ++ Y K + + ++ ++M+ I PD Y ++I L
Sbjct: 223 MSKRGIRFDVVSYASMMSCYSKAGSLYRVLRLYKQMKKIGIEPDRKVYNAVIHALAKGRL 282
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A +++K M+E G P+ YN+ I+ C A+++ +A G D+M+++ +SP TY+
Sbjct: 283 VNEAFNLMKTMEEKGVAPNIVTYNSLIKPLCRARKVEEAKGAFDDMLKRCISPTIRTYHA 342
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F R+ ++ + L +M GC P + + L++ R ++E +LW++M E G
Sbjct: 343 FLRILRTGEEV---FALLEKMRKMGCQPINDTYIMLIRKFCRWRQLENVFKLWDEMSENG 399
Query: 181 F----GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALME--LAN 234
SYI++ LF G+L A K + EM EK P +I +++ L+N
Sbjct: 400 ISPDRSSYIVLIHGLF----LNGELDAAHKYYTEMKEKQLLPEP----KIDEMLQTWLSN 451
Query: 235 KQEA 238
KQ A
Sbjct: 452 KQIA 455
Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 93/243 (38%), Gaps = 42/243 (17%)
Query: 10 IVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISP-DVISYTSIIGGL-GLVGQPDKARDV 67
I + L+ C+ + V+ A +++ ++ + P + S+ ++ G L+G P ++ V
Sbjct: 162 IEEFQSLLSALCRYKNVQDAEQLM--YCNKAVFPLNTKSFNIVLNGWCNLIGSPRESERV 219
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
+EM + G D +Y + + Y A L L +M + G+ P+ YN
Sbjct: 220 WREMSKRGIRFDVVSYASMMSCYSKAGSLYRVLRLYKQMKKIGIEPDRKVYNAVIHA--- 276
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ G L N A L M EKG I+
Sbjct: 277 --------------LAKGRLVNE------------------AFNLMKTMEEKGVAPNIVT 304
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMA 247
+ L LC K+ EA+ +F +M+++ P + R A + + E + L KM
Sbjct: 305 YNSLIKPLCRARKVEEAKGAFDDMLKRCISP---TIRTYHAFLRILRTGEEVFALLEKMR 361
Query: 248 LFG 250
G
Sbjct: 362 KMG 364
>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g31850, chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 113/226 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G+ P++ +YN LI + ++E A K+++ M + P +Y + I G G+
Sbjct: 393 MRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGE 452
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA + ++MK G P+ A NA++ + RLR+A + + + E GL+P++ TYN+
Sbjct: 453 TGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNM 512
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + + NL M+ GC P+ L+ + +V+ A Q+++ M +
Sbjct: 513 MMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMK 572
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ + L L G++ +A + F MI K P+ +SF +
Sbjct: 573 LSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTL 618
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 106/245 (43%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
+++G+ P + SYNCLI + EKA+ + + M++ +PD ++ ++ G G+
Sbjct: 780 KKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKI 839
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
+ ++ KEM C PDA YN I + + L A ++V P TY
Sbjct: 840 TELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPL 899
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
L + L+ M GC PN L+ + E A QL+ MV +G
Sbjct: 900 IDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGI 959
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQN 241
+ +L D LC G++ EA F E+ G P +++ RI + + + E
Sbjct: 960 RPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALA 1019
Query: 242 LSNKM 246
L N+M
Sbjct: 1020 LYNEM 1024
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 76/145 (52%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G++PD+ SY L+D C +V++A +++ + PD I+Y II GLG + ++A
Sbjct: 958 GIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEA 1017
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ EM+ G PD YN+ + N +A + A + +E+ GL P+ TYN R
Sbjct: 1018 LALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRG 1077
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPN 149
+ S + ++ +Y MM GC PN
Sbjct: 1078 YSLSENPEHAYTVYKNMMVDGCNPN 1102
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 106/226 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +GV+P +Y ID + K + KA + EKM+ + I P++++ + + L +G+
Sbjct: 428 MESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGR 487
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A+ + ++E G PD+ YN ++ Y ++ +A L+ EM+ G P+ N
Sbjct: 488 LREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNS 547
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
Y + + +W ++ RM P + L+ ++ +V+ A++L+ M+ K
Sbjct: 548 LIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKK 607
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + L D C ++ A K F +M KP +++ +
Sbjct: 608 CSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTV 653
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 105/244 (43%), Gaps = 1/244 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G PD+V+Y LID C Q+E A ++ KM+ PD + Y +++ G
Sbjct: 288 MDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGD 347
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D ++ +M+ G PD + + C A+ +A D M ++G+ PN TYN
Sbjct: 348 LDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNT 407
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + L M G P + + + + + A++ + M KG
Sbjct: 408 LICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKG 467
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEAL 239
I+ + L +MG+L EA+ F + E G P V++ +K ++ EA+
Sbjct: 468 IVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAV 527
Query: 240 QNLS 243
LS
Sbjct: 528 NLLS 531
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 110/239 (46%), Gaps = 1/239 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++G++P++ ++ I V + ++++AY+I +M DE PD+++YT +I L GQ
Sbjct: 253 MEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQ 312
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A+++ +MK G PD Y + + L +M G P+ T+ +
Sbjct: 313 LENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTI 372
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
V + D ++ + M G LPN + L+ R ++E AL+L + M G
Sbjct: 373 LVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVG 432
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEA 238
D G+ +A ++F +M KG P+ V+ + +L E+ +EA
Sbjct: 433 VQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREA 491
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 109/250 (43%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ +G PD ++N L+ V+ K ++ + +++ ++M PD I+Y +I L
Sbjct: 814 MKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNN 873
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA D ++ P Y I RL +A L +EM + G PN +N+
Sbjct: 874 LDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNI 933
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ D ++ L+ RM+ G P+ +S LV +V+ AL +N++ G
Sbjct: 934 LINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTG 993
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ + + + L ++ EA + EM +G P ++ + + LA E +
Sbjct: 994 LDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAK 1053
Query: 241 NLSNKMALFG 250
+ ++ L G
Sbjct: 1054 RMYEELQLAG 1063
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 88/180 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G KP+ +N LI+ Y K E A ++ ++M +E I PD+ SYT ++ L L G+
Sbjct: 919 MSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGR 978
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A E+K G PD AYN I ++R+ +A L +EM +G+ P+ TYN
Sbjct: 979 VDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNS 1038
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + +Y + G P+ + L++ E E A ++ +M+ G
Sbjct: 1039 LMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDG 1098
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 99/219 (45%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+KP + +Y+ L+ K R E ++++M D + P+V ++T I LG G+ D+A
Sbjct: 222 GLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEA 281
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++ + M + GC PD Y I C A +L +A L +M G P+ Y
Sbjct: 282 YEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDK 341
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
F DL + + +M G +P+ + LV + + + A ++ M ++G
Sbjct: 342 FNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPN 401
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + L L G++ +A K M G +P+ ++
Sbjct: 402 LHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTY 440
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 69/118 (58%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
++ G+ PD ++YN +I+ K +++E+A + +MR+ I PD+ +Y S++ LGL G
Sbjct: 989 LKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGM 1048
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
++A+ + +E++ G PD YNA IR Y +++ A + M+ G +PN TY
Sbjct: 1049 VEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTY 1106
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 94/199 (47%)
Query: 25 QVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYN 84
+VE + E M+ + I D+ +Y +I L + G + VL +M++ G +A +YN
Sbjct: 137 KVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYN 196
Query: 85 AAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGT 144
I + +A + MV +GL P+ TY+ D L M
Sbjct: 197 GLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDL 256
Query: 145 GCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEA 204
G PN + +++ R K++ A +++ M ++G G ++ VL D LC+ G+L A
Sbjct: 257 GLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENA 316
Query: 205 EKSFLEMIEKGHKPSQVSF 223
++ F++M GHKP QV +
Sbjct: 317 KELFVKMKANGHKPDQVIY 335
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 105/233 (45%), Gaps = 11/233 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+RE G+ PD V+YN ++ Y K QV++A ++ +M PDVI S+I L G+
Sbjct: 498 LRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGR 557
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + MK+ P YN + R++ A L + M+ K SPN ++N
Sbjct: 558 VDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNT 617
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F ++++ + ++ +M C P+ + ++ ++ KV A ++ + +
Sbjct: 618 LLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKSM 677
Query: 181 FGSYILVSDVLFDLL--CDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALME 231
++ + +L L+ +G + + F+ QV FR ++ E
Sbjct: 678 HPDHVTICTLLPGLVKCGQIGDAISIARDFM---------YQVRFRVNRSFWE 721
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 103/241 (42%), Gaps = 1/241 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G KPD V Y L+D + ++ + +M + PDV+++T ++ L
Sbjct: 323 MKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARD 382
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A M++ G P+ YN I A R+ DA L+D M G+ P A TY
Sbjct: 383 FDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYIT 442
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F F S + + + +M G +PN +C + ++ A ++N + E G
Sbjct: 443 FIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENG 502
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
+ +++ +G++ EA EMI G +P + I +L + EA
Sbjct: 503 LAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAW 562
Query: 240 Q 240
Q
Sbjct: 563 Q 563
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 110/243 (45%), Gaps = 1/243 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G + SYN LI + + +A ++ +M E + P + +Y++++ LG
Sbjct: 183 MRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRD 242
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ +LKEM++ G P+ + IR A ++ +A + M ++G P+ TY +
Sbjct: 243 SEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTV 302
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L ++ L+ +M G P+ + L+ ++ + W+ M G
Sbjct: 303 LIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADG 362
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
+ ++ +L D+LC EA +F M ++G P+ ++ I L+ ++AL
Sbjct: 363 YMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDAL 422
Query: 240 QNL 242
+ L
Sbjct: 423 KLL 425
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/288 (19%), Positives = 119/288 (41%), Gaps = 40/288 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M M KPD+++YN +I K+ +V A+ +++ + + PD ++ +++ GL GQ
Sbjct: 638 MTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLK-KSMHPDHVTICTLLPGLVKCGQ 696
Query: 61 PDKA----RDVL----------------------KEMKEYGCYPDAAAYNAA-------- 86
A RD + EM + + + N
Sbjct: 697 IGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLI 756
Query: 87 --IRNYCIAKRLRDASGLMDEMVEK-GLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMG 143
+R C KR A + D+ +K G+SP +YN + +W+L+ M
Sbjct: 757 PLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKN 816
Query: 144 TGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVE 203
GC P+ + L+ + + K+ +L+ +M+ + + +++ L L +
Sbjct: 817 VGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDK 876
Query: 204 AEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLSNKMALFG 250
A F +++ +P+ ++ I L ++ +EA++ L +M+ +G
Sbjct: 877 ALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMR-LFEEMSDYG 923
>gi|224108788|ref|XP_002314968.1| predicted protein [Populus trichocarpa]
gi|222864008|gb|EEF01139.1| predicted protein [Populus trichocarpa]
Length = 662
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 114/226 (50%), Gaps = 5/226 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G++ ++ +YN L+ CK+ +V+ A K++ +M + PD +SYT+++ + +G+
Sbjct: 169 MKRDGIELNVYTYNMLLKALCKNDRVDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGK 228
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++AR++ +K + YNA I +C ++ + L +EM +G+ P+ TY+
Sbjct: 229 VEEARELSMRIKSF-----VPVYNALINGFCREHKMEEVFELFNEMAVEGIDPDVITYST 283
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++ + + +M GC PN + L+K ++ AL LWN M+++G
Sbjct: 284 VINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEG 343
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + L LC GK+VEA +M G P++ ++ +
Sbjct: 344 SEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTL 389
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 122/251 (48%), Gaps = 13/251 (5%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G P++V Y C++DV C++ A ++E M + + P+ I++ + I GL G+ + A
Sbjct: 413 GCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWA 472
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
VL +M++YGC P+ YN + AKR R+A ++ E+ E + N TYN
Sbjct: 473 MKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSG 532
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG-S 183
F + + + + +++ G P++ + ++ +Q +V+ A+QL + + +KG G
Sbjct: 533 FCHAGMFKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGYP 592
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLS 243
+ L +C+ + EA +MI +G P++ ++ + ++ L
Sbjct: 593 DVFTYTSLLWGVCNWIGVDEAVVHLDKMINEGICPNRATWNAL------------VRGLF 640
Query: 244 NKMALFGPSMI 254
+K+ GP I
Sbjct: 641 SKLGHLGPIHI 651
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 115/247 (46%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
M +K + YN LI+ +C++ ++E+ +++ +M E I PDVI+Y+++I L +G +
Sbjct: 237 MRIKSFVPVYNALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEM 296
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
A VL +M GC P+ + + ++ Y + RL +A L + M+++G PN YN
Sbjct: 297 ALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIH 356
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
+ + ++ +M G PN + L+ + + A ++WN M+ G
Sbjct: 357 GLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLP 416
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLS 243
++V + D+LC A M P+ ++F + + K E +
Sbjct: 417 NVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVL 476
Query: 244 NKMALFG 250
N+M +G
Sbjct: 477 NQMRQYG 483
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 110/237 (46%), Gaps = 1/237 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ PD+++Y+ +I+ + VE A ++ KM SP+V ++TS++ G + G+ +A
Sbjct: 273 GIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEA 332
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
D+ M + G P+ AYN I C ++ +A + +M G+ PN TTY+
Sbjct: 333 LDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDG 392
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
F + DL + ++ +M+ GCLPN +V + R AL L +M
Sbjct: 393 FAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPN 452
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI-KALMELANKQEALQ 240
+ + LC GK A K +M + G P+ ++ + L +EALQ
Sbjct: 453 TITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQ 509
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 96/226 (42%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G +P+ V+YN LI C ++ +A + +KM + P+ +Y+++I G G
Sbjct: 339 MIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGD 398
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A ++ +M GC P+ Y + C A L++ M PN T+N
Sbjct: 399 LVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNT 458
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + S + + +M GC PN + ++ ++ ALQ+ ++ E
Sbjct: 459 FIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEME 518
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
S ++ + + C G A + +++ G KP +++ +
Sbjct: 519 IKSNLVTYNTILSGFCHAGMFKGALQIAGKLLVGGTKPDSITYNTV 564
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 100/222 (45%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G P++ ++ L+ Y ++ +A + +M E P+ ++Y ++I GL G+ +A
Sbjct: 308 GCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEA 367
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
V ++M+ G +P+ Y+ I + A L AS + ++M+ G PN Y V
Sbjct: 368 VSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDV 427
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
++ + +L M C PNT + +K K E A+++ N M + G
Sbjct: 428 LCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPN 487
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + + D L + + EA + E+ E K + V++ I
Sbjct: 488 VTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTI 529
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 108/247 (43%), Gaps = 7/247 (2%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
K ++Y +I +R ++ +++ M+ E IS + + +I G ++A
Sbjct: 70 KHTPLTYTTMIKRLGYERDIDGIQYLLQLMKLEGISCNEDLFVIVINAYRRAGLAEQALK 129
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
+ E+GC P YN + + + +G+ + M G+ N TYN+ +
Sbjct: 130 TFYRIGEFGCKPSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIELNVYTYNMLLKALC 189
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
++ + ++ L M GC+P+ S +V R KVE A +L S++
Sbjct: 190 KNDRVDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEAREL-----SMRIKSFVP 244
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLSNK 245
V + L + C K+ E + F EM +G P +++ I L E+ N + AL L+ K
Sbjct: 245 VYNALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLA-K 303
Query: 246 MALFGPS 252
M L G S
Sbjct: 304 MFLRGCS 310
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 80/160 (50%), Gaps = 3/160 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G P++ +YN ++D ++ +A +IV ++ + +I ++++Y +I+ G G
Sbjct: 479 MRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAGM 538
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLS-PNATTY- 118
A + ++ G PD+ YN I YC ++ A L+D + +KG P+ TY
Sbjct: 539 FKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGYPDVFTYT 598
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK 158
+L + V W + +L +M+ G PN + LV+
Sbjct: 599 SLLWGVCNWIGVDEAVVHLD-KMINEGICPNRATWNALVR 637
>gi|357448559|ref|XP_003594555.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483603|gb|AES64806.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 89/172 (51%), Gaps = 1/172 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G PDI +YN LI Y + +V+ A KI E++ + + PDVISY S+I LG G
Sbjct: 456 MKQDGPPPDIFTYNILISSYGRAGRVDSAVKIFEELENSNCQPDVISYNSLINCLGKNGD 515
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A KEM+E G PD Y+ I + ++ A L DEM+ +G SPN TYN+
Sbjct: 516 VDEAHMRFKEMQEKGLNPDVVTYSTLIECFGKTDKVEMACSLFDEMIAEGCSPNLVTYNI 575
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKL-CKRQEKVEIALQ 171
S + +LY ++ G P++ + L +L R K+ + Q
Sbjct: 576 LLDCLERSGRTAEAVDLYAKLKQQGLTPDSITYAVLERLQSGRHGKLRVRRQ 627
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 89/183 (48%), Gaps = 4/183 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
E + D + YN + + +QV + + EKM+ + PD+ +Y +I G G+
Sbjct: 421 FHEKCITTDTIMYNTVFTALGRLKQVSHIHDLYEKMKQDGPPPDIFTYNILISSYGRAGR 480
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKR--LRDASGLMDEMVEKGLSPNATTY 118
D A + +E++ C PD +YN+ I C+ K + +A EM EKGL+P+ TY
Sbjct: 481 VDSAVKIFEELENSNCQPDVISYNSLIN--CLGKNGDVDEAHMRFKEMQEKGLNPDVVTY 538
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
+ F ++ + + +L+ M+ GC PN + L+ +R + A+ L+ + +
Sbjct: 539 STLIECFGKTDKVEMACSLFDEMIAEGCSPNLVTYNILLDCLERSGRTAEAVDLYAKLKQ 598
Query: 179 KGF 181
+G
Sbjct: 599 QGL 601
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 108/223 (48%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
K D +Y +++ C ++ +A ++ + ++ I+ D I Y ++ LG + Q D
Sbjct: 392 KGDKDAYMSMLESLCSSGKIAEAIDLLNRFHEKCITTDTIMYNTVFTALGRLKQVSHIHD 451
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
+ ++MK+ G PD YN I +Y A R+ A + +E+ P+ +YN
Sbjct: 452 LYEKMKQDGPPPDIFTYNILISSYGRAGRVDSAVKIFEELENSNCQPDVISYNSLINCLG 511
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+ D+ + + M G P+ + L++ + +KVE+A L+++M+ +G ++
Sbjct: 512 KNGDVDEAHMRFKEMQEKGLNPDVVTYSTLIECFGKTDKVEMACSLFDEMIAEGCSPNLV 571
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKAL 229
++L D L G+ EA + ++ ++G P +++ ++ L
Sbjct: 572 TYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSITYAVLERL 614
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 105/255 (41%), Gaps = 11/255 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G DI ++N L+D KD++V+KAYK+ E M+ PD +YT +I G G+
Sbjct: 214 MLRCGYSLDIFAFNMLLDALAKDQKVDKAYKVFEDMKRRHCEPDTFTYTIMIRMTGKAGK 273
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D++ + + M E G + AYN I + A L +MVE G PN TY++
Sbjct: 274 TDESLALFQAMLEKGFTLNLIAYNTMIEALAKGRMADKAVLLFSKMVENGCQPNEFTYSV 333
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV----KLCKRQEKVEIALQLWNDM 176
V L N+ + + N Q + V KL E + +WN
Sbjct: 334 LLNVLVAEGQLNKLDNI---VEMSKKYMNKQIYAYFVRTLSKLGHSSEAHRLFCNMWNVH 390
Query: 177 VEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQ 236
+ +Y+ + + LC GK+ EA EK + + + + +
Sbjct: 391 DKGDKDAYM----SMLESLCSSGKIAEAIDLLNRFHEKCITTDTIMYNTVFTALGRLKQV 446
Query: 237 EALQNLSNKMALFGP 251
+ +L KM GP
Sbjct: 447 SHIHDLYEKMKQDGP 461
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 102/228 (44%), Gaps = 12/228 (5%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+++ G++ + SY CL+ Y + R +KA+ + M S D+ ++ ++ L +
Sbjct: 179 VKKWGLRFNAYSYKCLLQGYLRLRDCDKAFGVYLDMLRCGYSLDIFAFNMLLDALAKDQK 238
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA V ++MK C PD Y IR A + ++ L M+EKG + N YN
Sbjct: 239 VDKAYKVFEDMKRRHCEPDTFTYTIMIRMTGKAGKTDESLALFQAMLEKGFTLNLIAYNT 298
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPN--TQSCMFLVKLCKRQ-EKVEIALQLWNDMV 177
+ L+ +M+ GC PN T S + V + + Q K++ +++ +
Sbjct: 299 MIEALAKGRMADKAVLLFSKMVENGCQPNEFTYSVLLNVLVAEGQLNKLDNIVEMSKKYM 358
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEM---IEKGHKPSQVS 222
K +Y + + L +G EA + F M +KG K + +S
Sbjct: 359 NKQIYAYFVRT------LSKLGHSSEAHRLFCNMWNVHDKGDKDAYMS 400
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/288 (20%), Positives = 121/288 (42%), Gaps = 34/288 (11%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G ++++YN +I+ K R +KA + KM + P+ +Y+ ++ L GQ
Sbjct: 284 MLEKGFTLNLIAYNTMIEALAKGRMADKAVLLFSKMVENGCQPNEFTYSVLLNVLVAEGQ 343
Query: 61 PDKARDVLKEMKEY---GCYP-----------------------------DAAAYNAAIR 88
+K ++++ K+Y Y D AY + +
Sbjct: 344 LNKLDNIVEMSKKYMNKQIYAYFVRTLSKLGHSSEAHRLFCNMWNVHDKGDKDAYMSMLE 403
Query: 89 NYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLP 148
+ C + ++ +A L++ EK ++ + YN F + +LY +M G P
Sbjct: 404 SLCSSGKIAEAIDLLNRFHEKCITTDTIMYNTVFTALGRLKQVSHIHDLYEKMKQDGPPP 463
Query: 149 NTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSF 208
+ + L+ R +V+ A++++ ++ ++ + L + L G + EA F
Sbjct: 464 DIFTYNILISSYGRAGRVDSAVKIFEELENSNCQPDVISYNSLINCLGKNGDVDEAHMRF 523
Query: 209 LEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFG--PSMI 254
EM EKG P V++ + +K E +L ++M G P+++
Sbjct: 524 KEMQEKGLNPDVVTYSTLIECFGKTDKVEMACSLFDEMIAEGCSPNLV 571
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/278 (20%), Positives = 107/278 (38%), Gaps = 32/278 (11%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVE-------------------------- 34
M E G +P+ +Y+ L++V + Q+ K IVE
Sbjct: 319 MVENGCQPNEFTYSVLLNVLVAEGQLNKLDNIVEMSKKYMNKQIYAYFVRTLSKLGHSSE 378
Query: 35 ------KMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIR 88
M + D +Y S++ L G+ +A D+L E D YN
Sbjct: 379 AHRLFCNMWNVHDKGDKDAYMSMLESLCSSGKIAEAIDLLNRFHEKCITTDTIMYNTVFT 438
Query: 89 NYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLP 148
K++ L ++M + G P+ TYN+ + + + S+ ++ + + C P
Sbjct: 439 ALGRLKQVSHIHDLYEKMKQDGPPPDIFTYNILISSYGRAGRVDSAVKIFEELENSNCQP 498
Query: 149 NTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSF 208
+ S L+ + V+ A + +M EKG ++ L + K+ A F
Sbjct: 499 DVISYNSLINCLGKNGDVDEAHMRFKEMQEKGLNPDVVTYSTLIECFGKTDKVEMACSLF 558
Query: 209 LEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKM 246
EMI +G P+ V++ + +E + + +L K+
Sbjct: 559 DEMIAEGCSPNLVTYNILLDCLERSGRTAEAVDLYAKL 596
>gi|242067351|ref|XP_002448952.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
gi|241934795|gb|EES07940.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
Length = 455
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 130/275 (47%), Gaps = 36/275 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G+ PD VSY LID CK +V+ A +M +E ++P+++ ++S++ GL + +
Sbjct: 56 MRQHGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFSSLVYGLCSIDK 115
Query: 61 PDKARDVLKEMKEYGCY-----------------------------------PDAAAYNA 85
+K ++ EM G + PD +YN
Sbjct: 116 WEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNT 175
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
I +C+A + +AS L++ MV GL PN+ +YN + + + S+++L+ +M+ G
Sbjct: 176 LIDGHCLAGTIDEASKLLEGMVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNG 235
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
P + ++ + ++ A +L+ +M+ G I + + + LC + EA
Sbjct: 236 ITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWGIYTYNTILNGLCKSNCVDEAF 295
Query: 206 KSFLEMIEKGHKPSQVSFR-RIKALMELANKQEAL 239
K F + KG + + ++F I AL++ K++A+
Sbjct: 296 KMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAM 330
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 109/227 (48%), Gaps = 2/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G+ P+IV +N ++ CK+ +V + ++V+ + + PDVISY ++I G L G
Sbjct: 126 MLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGT 185
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A +L+ M G P++ +YN + YC A R+ A L +M+ G++P TYN
Sbjct: 186 IDEASKLLEGMVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNT 245
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ + + LY M+ +G + L LCK V+ A +++ + K
Sbjct: 246 ILHGLFQTKRFSEAKELYLNMINSGTKWGIYTYNTILNGLCK-SNCVDEAFKMFQSLCSK 304
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G I+ ++ L G+ +A F + G P V++R +
Sbjct: 305 GLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRVV 351
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 97/217 (44%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
MGV+PD++SYN LID +C +++A K++E M + P+ SY +++ G G+ D
Sbjct: 164 MGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPNSFSYNTLLHGYCKAGRIDS 223
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
A + ++M G P YN + KR +A L M+ G TYN
Sbjct: 224 AYSLFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWGIYTYNTILN 283
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
SN + ++ ++ + G N + ++ + + E A+ L+ + G
Sbjct: 284 GLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVP 343
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQ 220
++ V+ + L + G L E + F M + G P+
Sbjct: 344 DVVTYRVVAENLIEEGSLEEFDSLFSAMEKNGTAPNS 380
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 101/257 (39%), Gaps = 35/257 (13%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD-- 62
G+ P+ +N Y K ++KA I KMR +SPD +SY ++I L +G+ D
Sbjct: 25 GISPNHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPDAVSYGALIDALCKLGRVDDA 84
Query: 63 ---------------------------------KARDVLKEMKEYGCYPDAAAYNAAIRN 89
K ++ EM G +P+ +N + N
Sbjct: 85 EVKFNQMINEGVTPNIVVFSSLVYGLCSIDKWEKVEELFFEMLNVGIHPNIVFFNTILCN 144
Query: 90 YCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPN 149
C R+ + L+D + G+ P+ +YN + + + L M+ G PN
Sbjct: 145 LCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPN 204
Query: 150 TQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFL 209
+ S L+ + +++ A L+ M+ G ++ + + L + EA++ +L
Sbjct: 205 SFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYL 264
Query: 210 EMIEKGHKPSQVSFRRI 226
MI G K ++ I
Sbjct: 265 NMINSGTKWGIYTYNTI 281
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 89/212 (41%), Gaps = 2/212 (0%)
Query: 16 LIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYG 75
++ Y + + + ++ M ISP+ + G DKA D+ +M+++G
Sbjct: 1 MLHGYGNKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHG 60
Query: 76 CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSW 135
PDA +Y A I C R+ DA ++M+ +G++PN ++ +
Sbjct: 61 LSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFSSLVYGLCSIDKWEKVE 120
Query: 136 NLYCRMMGTGCLPNTQSC-MFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDL 194
L+ M+ G PN L LCK +E +L + + G ++ + L D
Sbjct: 121 ELFFEMLNVGIHPNIVFFNTILCNLCKEGRVME-GQRLVDSIECMGVRPDVISYNTLIDG 179
Query: 195 LCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
C G + EA K M+ G KP+ S+ +
Sbjct: 180 HCLAGTIDEASKLLEGMVSVGLKPNSFSYNTL 211
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 59/131 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G K I +YN +++ CK V++A+K+ + + + + ++I++T +IG L G+
Sbjct: 266 MINSGTKWGIYTYNTILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGR 325
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A D+ + G PD Y N L + L M + G +PN+ N
Sbjct: 326 KEDAMDLFAAIPANGLVPDVVTYRVVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNA 385
Query: 121 FFRVFYWSNDL 131
R D+
Sbjct: 386 LVRRLLHRGDI 396
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/121 (19%), Positives = 55/121 (45%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G++ +I+++ +I K + E A + + + PDV++Y + L G ++
Sbjct: 305 GLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRVVAENLIEEGSLEEF 364
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ M++ G P++ NA +R + A + ++ E+ S A+T ++ +
Sbjct: 365 DSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISI 424
Query: 125 F 125
F
Sbjct: 425 F 425
>gi|115448805|ref|NP_001048182.1| Os02g0759500 [Oryza sativa Japonica Group]
gi|46805701|dbj|BAD17102.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47497356|dbj|BAD19395.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113537713|dbj|BAF10096.1| Os02g0759500 [Oryza sativa Japonica Group]
gi|125583759|gb|EAZ24690.1| hypothetical protein OsJ_08460 [Oryza sativa Japonica Group]
gi|215704115|dbj|BAG92955.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215766866|dbj|BAG99094.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 555
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 114/252 (45%), Gaps = 3/252 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDI---SPDVISYTSIIGGLGL 57
M +M P+ +YN ID +C V +A + E MR E SP +Y+ +I L
Sbjct: 281 MIQMKHTPENFTYNAAIDSFCSAGLVSEARDLFEFMRTEGSTISSPTAKTYSIMIAALAK 340
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
GQ ++ +++ EM++ GC PD + Y I + +L A ++DEM + G P+ T
Sbjct: 341 AGQMEECFELISEMRKCGCMPDVSTYKDLIEGMLLVDKLDAAYCVLDEMAKAGFPPDIVT 400
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
YN F +V + L RM+ C P+ + L+ + + + A+ +W +M
Sbjct: 401 YNCFLKVLCGLQKADDALELCERMIEAHCEPSVHTYNMLMVMFFEMREPDRAINIWIEMD 460
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQE 237
++G + + + D L D G+ +A E+I +G K S F I +
Sbjct: 461 KRGCHRAVDTYETMIDGLFDSGRTEDATALLDEVINRGMKLSYKKFDAIMLRLSAVGNLG 520
Query: 238 ALQNLSNKMALF 249
A+ LS M F
Sbjct: 521 AIHRLSEHMRRF 532
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 106/223 (47%), Gaps = 4/223 (1%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
M P+ + N L+D +CK V +A + +++ + + + +Y+ + G P +
Sbjct: 215 MRTPPETDALNVLLDAFCKCGMVREAEVVFSRVKRKLLG-NAETYSILFFGWCRARDPKR 273
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKG---LSPNATTYNL 120
A VL+EM + P+ YNAAI ++C A + +A L + M +G SP A TY++
Sbjct: 274 AMKVLEEMIQMKHTPENFTYNAAIDSFCSAGLVSEARDLFEFMRTEGSTISSPTAKTYSI 333
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + L M GC+P+ + L++ +K++ A + ++M + G
Sbjct: 334 MIAALAKAGQMEECFELISEMRKCGCMPDVSTYKDLIEGMLLVDKLDAAYCVLDEMAKAG 393
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
F I+ + +LC + K +A + MIE +PS ++
Sbjct: 394 FPPDIVTYNCFLKVLCGLQKADDALELCERMIEAHCEPSVHTY 436
>gi|125541207|gb|EAY87602.1| hypothetical protein OsI_09013 [Oryza sativa Indica Group]
Length = 555
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 114/252 (45%), Gaps = 3/252 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDI---SPDVISYTSIIGGLGL 57
M +M P+ +YN ID +C V +A + E MR E SP +Y+ +I L
Sbjct: 281 MIQMKHTPENFTYNAAIDSFCSAGLVSEARDLFEFMRTEGSTISSPTAKTYSIMIAALAK 340
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
GQ ++ +++ EM++ GC PD + Y I + +L A ++DEM + G P+ T
Sbjct: 341 AGQMEECFELISEMRKCGCMPDVSTYKDLIEGMLLVDKLDAAYCVLDEMAKAGFPPDIVT 400
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
YN F +V + L RM+ C P+ + L+ + + + A+ +W +M
Sbjct: 401 YNCFLKVLCGLQKADDALELCERMIEAHCEPSVHTYNMLMVMFFEMREPDRAINIWIEMD 460
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQE 237
++G + + + D L D G+ +A E+I +G K S F I +
Sbjct: 461 KRGCHRAVDTYETMIDGLFDSGRTEDATTLLDEVINRGMKLSYKKFDAIMLRLSAVGNLG 520
Query: 238 ALQNLSNKMALF 249
A+ LS M F
Sbjct: 521 AIHRLSEHMRRF 532
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 106/223 (47%), Gaps = 4/223 (1%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
M P+ + N L+D +CK V +A + +++ + + + +Y+ + G P +
Sbjct: 215 MRTPPETDALNVLLDAFCKSGMVREAEAVFSRVKRKLLG-NAETYSILFFGWCRARDPKR 273
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKG---LSPNATTYNL 120
A VL+EM + P+ YNAAI ++C A + +A L + M +G SP A TY++
Sbjct: 274 AMKVLEEMIQMKHTPENFTYNAAIDSFCSAGLVSEARDLFEFMRTEGSTISSPTAKTYSI 333
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + L M GC+P+ + L++ +K++ A + ++M + G
Sbjct: 334 MIAALAKAGQMEECFELISEMRKCGCMPDVSTYKDLIEGMLLVDKLDAAYCVLDEMAKAG 393
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
F I+ + +LC + K +A + MIE +PS ++
Sbjct: 394 FPPDIVTYNCFLKVLCGLQKADDALELCERMIEAHCEPSVHTY 436
>gi|162460542|ref|NP_001105869.1| pentatricopeptide repeat protein [Zea mays]
gi|95931777|gb|ABF57644.1| pentatricopeptide repeat protein [Zea mays]
Length = 886
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 121/251 (48%), Gaps = 2/251 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G++PD YN L++ +CK +++A +I E+M+ E + P ++ II G + G
Sbjct: 487 MIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMQKERMQPSNRTFRPIIEGFAVAGD 546
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A D L M+ GC P YNA I ++ A ++D+M G++PN TY +
Sbjct: 547 MKRAFDTLDLMRRSGCAPTVMTYNALIHGLVRKHQVEKAVSVLDKMSIAGIAPNEHTYTI 606
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
R + S D+ ++ + ++ +G + L++ C + +++ AL + +M +
Sbjct: 607 IMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQK 666
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
+ ++L D G + EA +M E G P+ +F I A + + Q A
Sbjct: 667 IPRNTFIYNILIDGWARRGDVWEAADLLKQMKEDGIPPNIHTFTSYINACCKAGDMQRA- 725
Query: 240 QNLSNKMALFG 250
+N+ +MA G
Sbjct: 726 ENVIQEMADVG 736
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 101/217 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
++E G KP I+SY CLI++Y K +V KA I ++M I + +Y+ +I G +
Sbjct: 417 LKECGFKPTIISYGCLINLYVKVGKVPKAIAISKEMESHGIKHNNKTYSMLINGFIHLHD 476
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A + ++M + G PD A YN + +C + A + + M ++ + P+ T+
Sbjct: 477 FANAFSIFEDMIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMQKERMQPSNRTFRP 536
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + D++ +++ M +GC P + L+ R+ +VE A+ + + M G
Sbjct: 537 IIEGFAVAGDMKRAFDTLDLMRRSGCAPTVMTYNALIHGLVRKHQVEKAVSVLDKMSIAG 596
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHK 217
++ G + +A + F ++ E G K
Sbjct: 597 IAPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLK 633
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 90/216 (41%), Gaps = 35/216 (16%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G P +++YN LI + QVEKA +++KM I+P+ +YT I+ G G
Sbjct: 557 MRRSGCAPTVMTYNALIHGLVRKHQVEKAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGD 616
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLR----------------------- 97
KA + ++KE G D Y +R C + R++
Sbjct: 617 IGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNI 676
Query: 98 ------------DASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
+A+ L+ +M E G+ PN T+ + + D++ + N+ M G
Sbjct: 677 LIDGWARRGDVWEAADLLKQMKEDGIPPNIHTFTSYINACCKAGDMQRAENVIQEMADVG 736
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
PN ++ L+K R + AL+ + +M G
Sbjct: 737 LKPNVKTFTTLIKGWARVSLPDRALKCFEEMKSAGL 772
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 60/111 (54%), Gaps = 6/111 (5%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E G+ P+I ++ I+ CK +++A ++++M D + P+V ++T++I G V
Sbjct: 697 MKEDGIPPNIHTFTSYINACCKAGDMQRAENVIQEMADVGLKPNVKTFTTLIKGWARVSL 756
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGL 111
PD+A +EMK G PD AAY +C+ L + +M+ G+
Sbjct: 757 PDRALKCFEEMKSAGLKPDEAAY------HCLVTSLLSRATVMEGSTYTGI 801
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 100/226 (44%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G++ +V+Y+ LI Y K + A + ++ + + + + I Y++II G
Sbjct: 312 MKSEGIEMTVVTYSILISGYGKTNDAQSADNLFKEAKTKLDNLNGIIYSNIIHAHCQSGN 371
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A ++++EM+E G Y++ + Y + + + + + + E G P +Y
Sbjct: 372 MDRAEELVREMEEDGIDAPIDVYHSMMHGYTVVQDEKKCLIVFERLKECGFKPTIISYGC 431
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++ + + + M G N ++ L+ A ++ DM++ G
Sbjct: 432 LINLYVKVGKVPKAIAISKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKSG 491
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ ++L + C MG + A + F M ++ +PS +FR I
Sbjct: 492 LQPDRAIYNLLVEAFCKMGNMDRAIRIFERMQKERMQPSNRTFRPI 537
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 99/241 (41%), Gaps = 1/241 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G++P+ + L+ Y + A VE+M+ E I V++Y+ +I G G
Sbjct: 277 MRARGIEPNAFVFTSLVHAYAVAGDMRGALSCVEEMKSEGIEMTVVTYSILISGYGKTND 336
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A ++ KE K + Y+ I +C + + A L+ EM E G+ Y+
Sbjct: 337 AQSADNLFKEAKTKLDNLNGIIYSNIIHAHCQSGNMDRAEELVREMEEDGIDAPIDVYHS 396
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ D + ++ R+ G P S L+ L + KV A+ + +M G
Sbjct: 397 MMHGYTVVQDEKKCLIVFERLKECGFKPTIISYGCLINLYVKVGKVPKAIAISKEMESHG 456
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEAL 239
+L + + A F +MI+ G +P + + ++A ++ N A+
Sbjct: 457 IKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKSGLQPDRAIYNLLVEAFCKMGNMDRAI 516
Query: 240 Q 240
+
Sbjct: 517 R 517
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 54/107 (50%)
Query: 13 YNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMK 72
YN LID + + V +A ++++M+++ I P++ ++TS I G +A +V++EM
Sbjct: 674 YNILIDGWARRGDVWEAADLLKQMKEDGIPPNIHTFTSYINACCKAGDMQRAENVIQEMA 733
Query: 73 EYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ G P+ + I+ + A +EM GL P+ Y+
Sbjct: 734 DVGLKPNVKTFTTLIKGWARVSLPDRALKCFEEMKSAGLKPDEAAYH 780
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 78/171 (45%), Gaps = 12/171 (7%)
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
G AR + M+ G P+A + + + Y +A +R A ++EM +G+ TY
Sbjct: 265 GDKHHARATFENMRARGIEPNAFVFTSLVHAYAVAGDMRGALSCVEEMKSEGIEMTVVTY 324
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMF--LVKLCKRQEKVEIALQLWNDM 176
++ + +ND +S+ NL+ L N ++ ++ + ++ A +L +M
Sbjct: 325 SILISGYGKTNDAQSADNLFKEAKTK--LDNLNGIIYSNIIHAHCQSGNMDRAEELVREM 382
Query: 177 VEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEK----GHKPSQVSF 223
E G + I DV ++ +V+ EK L + E+ G KP+ +S+
Sbjct: 383 EEDGIDAPI---DVYHSMMHGY-TVVQDEKKCLIVFERLKECGFKPTIISY 429
>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 729
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 114/241 (47%), Gaps = 1/241 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ PD+V+Y L++ CK + A + ++M ++PD +YT+ I G +G
Sbjct: 438 MINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGD 497
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA + +EM G PD YN + C L +A L+ +M+ G P+ TY
Sbjct: 498 TAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTS 557
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + LR ++ M+ G P + L+ +++ A+ + +M EKG
Sbjct: 558 FMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKG 617
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEAL 239
++ +VL + C + K+ +A K F+EM EKG P++ ++ I + QEAL
Sbjct: 618 VVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEAL 677
Query: 240 Q 240
+
Sbjct: 678 R 678
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 123/276 (44%), Gaps = 36/276 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G++P + +YN ++ +CK +V++A +V KM++ P +++ +I GL G+
Sbjct: 228 MGEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGE 287
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A+ +++EM + G YN I YC L +A L +EMV +G+SP ++N
Sbjct: 288 LQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNT 347
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCK------------------ 161
F + + M+ +P+ S L+ C+
Sbjct: 348 IMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRN 407
Query: 162 ----------------RQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
R +E AL+L DM+ +G ++ VL + C +G ++ A+
Sbjct: 408 LSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAK 467
Query: 206 KSFLEMIEKGHKPSQVSFR-RIKALMELANKQEALQ 240
+ F EM+ G P Q ++ RI ++L + +A +
Sbjct: 468 EFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFK 503
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 111/240 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G+ PD +Y I K KA+K+ E+M + PDVI+Y + GL +G
Sbjct: 473 MLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGN 532
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A ++L++M G PD Y + + + LR+ + +M+ +G +P TY +
Sbjct: 533 LEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTV 592
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L + + M G +PN + L+ + K++ A + + +M EKG
Sbjct: 593 LIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKG 652
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+L + C+MGK EA + + +M+ K +P + + ++ K +A+Q
Sbjct: 653 IFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRPDSCTHGALLKKLDKDYKVQAVQ 712
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 117/274 (42%), Gaps = 36/274 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G++ +YN LI YCK + +A + E+M +SP V S+ +I+ G G+
Sbjct: 298 MAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGK 357
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
AR L +M + PD +YN I +C + +A L+DE+ + LS N TYN
Sbjct: 358 MSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNT 417
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKR----------QEKVEI- 168
DL ++ L M+ G P+ + LV CK E + +
Sbjct: 418 LIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVG 477
Query: 169 -----------------------ALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
A +L +M+ KGF ++ +V + LC +G L EA
Sbjct: 478 LAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAG 537
Query: 206 KSFLEMIEKGHKPSQVSFRR-IKALMELANKQEA 238
+ +MI GH P V++ + A ME + +E
Sbjct: 538 ELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREG 571
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 96/233 (41%), Gaps = 36/233 (15%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD+ + N ++ + + KA ++ M + I P V +Y +++ G+ +A D+
Sbjct: 200 PDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDL 259
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
+ +M+E GCYP +N I L+ A GL+ EM + GL + TYN
Sbjct: 260 VPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYN-------- 311
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
L C CK+ VE AL LW +MV +G +
Sbjct: 312 --------PLIC------------------GYCKKGLLVE-ALALWEEMVTRGVSPTVAS 344
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
+ + C GK+ +A + +M++K P +S+ I L N EA
Sbjct: 345 HNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAF 397
Score = 37.7 bits (86), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 57/117 (48%), Gaps = 2/117 (1%)
Query: 140 RMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMG 199
+MM LP+ ++C ++K+ + + + AL+++ M E G + + + C G
Sbjct: 192 KMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHSFCKGG 251
Query: 200 KLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEALQNLSNKMALFGPSMIP 255
++ A +M E+G PS+V+F I L + Q+A + L +MA G + P
Sbjct: 252 EVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQA-KGLIQEMAKAGLRVSP 307
>gi|255660960|gb|ACU25649.1| pentatricopeptide repeat-containing protein [Verbena halei]
Length = 376
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 110/241 (45%), Gaps = 3/241 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E G D ++Y L+ +CK+ ++K+ ++E + D +Y+++I GL
Sbjct: 85 MKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEAN 144
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A VL +M + GC P+ YN I A + DA + EM SP TYN
Sbjct: 145 LDRALSVLNDMIKSGCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNT 204
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++NL ++ G P + L+K +VE ALQLWN + KG
Sbjct: 205 LINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHRVERALQLWNQVTSKG 264
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
F + + ++L LC +GK+ A + +M P+ VS LME K ++
Sbjct: 265 FKPDVQMHNILIHGLCSVGKMQLALSLYFDMNHWKCAPNLVSHN---TLMEGFYKDGDIR 321
Query: 241 N 241
N
Sbjct: 322 N 322
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 91/181 (50%), Gaps = 3/181 (1%)
Query: 2 REMGV---KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLV 58
REMG P I++YN LI+ CK+ +AY +V+++ D+ + P VI+Y+ ++ GL L
Sbjct: 188 REMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLD 247
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
+ ++A + ++ G PD +N I C +++ A L +M +PN ++
Sbjct: 248 HRVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNHWKCAPNLVSH 307
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
N FY D+R++ ++ R++ G P+ S +K ++ A+ +D V
Sbjct: 308 NTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGLCSCNRISDAILFLHDAVT 367
Query: 179 K 179
K
Sbjct: 368 K 368
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 94/204 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G KP++ YN LI+ + E A ++ +M SP +I+Y ++I GL
Sbjct: 155 MIKSGCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEM 214
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A +++KE+ + G P Y+ ++ C+ R+ A L +++ KG P+ +N+
Sbjct: 215 FGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHRVERALQLWNQVTSKGFKPDVQMHNI 274
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++ + +LY M C PN S L++ + + AL +W ++ G
Sbjct: 275 LIHGLCSVGKMQLALSLYFDMNHWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNG 334
Query: 181 FGSYILVSDVLFDLLCDMGKLVEA 204
I+ ++ LC ++ +A
Sbjct: 335 LEPDIISYNITLKGLCSCNRISDA 358
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 109/245 (44%), Gaps = 1/245 (0%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E V PD V YN +++ Y + +++ +++ E M E + V S+ ++ GL G+ D
Sbjct: 18 ESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEG-NRSVSSFNIMMRGLFDNGKVD 76
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
+ + + MKE G D+ Y + +C + + +++ +KG +A Y+
Sbjct: 77 EVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMI 136
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
+L + ++ M+ +GC PN L+ K E A++++ +M
Sbjct: 137 NGLCKEANLDRALSVLNDMIKSGCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTMHCS 196
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNL 242
I+ + L + LC EA E+++KG P +++ + + L ++ E L
Sbjct: 197 PTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHRVERALQL 256
Query: 243 SNKMA 247
N++
Sbjct: 257 WNQVT 261
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 82/183 (44%), Gaps = 2/183 (1%)
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
G D A+ V K++ E PDA YNA + Y +++D L + M +G + + +++
Sbjct: 4 GDIDGAKRVYKKIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEG-NRSVSSF 62
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
N+ R + + + +++ M +G + ++ + LV + ++ +L + +
Sbjct: 63 NIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQ 122
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS-QVSFRRIKALMELANKQE 237
KG + + LC L A +MI+ G KP+ V I L+ + ++
Sbjct: 123 KGGVLDAFAYSAMINGLCKEANLDRALSVLNDMIKSGCKPNVHVYNTLINGLVGASKFED 182
Query: 238 ALQ 240
A++
Sbjct: 183 AIR 185
>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 999
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 120/240 (50%), Gaps = 3/240 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ P+ +Y LID + K+ +E+A +I ++M + +V++Y ++IGG+ G+
Sbjct: 337 MPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGE 396
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA + EM G PD YN I Y + + A L+ EM + L+P+ TY++
Sbjct: 397 MAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSV 456
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
S+DL+ + + +M+ G PN L+K ++ + E+A++L M+ G
Sbjct: 457 LISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANG 516
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ + L LC K+ EA+ ++M EKG KP+ ++ A + L +K +Q
Sbjct: 517 VLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTY---GAFINLYSKSGEIQ 573
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 117/260 (45%), Gaps = 38/260 (14%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+KP+ +Y I++Y K +++ A + + M I P+ + YT +I G VG
Sbjct: 547 MGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGN 606
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRN------------------------------- 89
+A K M E G PD AY+A I +
Sbjct: 607 TVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNS 666
Query: 90 ----YCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW--SNDLRSSWNLYCRMMG 143
+C + AS L DEM+ G++PN YN + + S +L ++ L+ M+
Sbjct: 667 LISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMIS 726
Query: 144 TGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVE 203
G P+ L+ C ++ +E AL L+++ +K GS + + L D C GK++E
Sbjct: 727 KGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGS-LSAFNSLIDSFCKHGKVIE 785
Query: 204 AEKSFLEMIEKGHKPSQVSF 223
A + F +M++K P+ V++
Sbjct: 786 ARELFDDMVDKKLTPNIVTY 805
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 2/216 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
GV PD+ YNCLI C+ ++VE+A ++ M ++ I P+ +Y + I G+ A
Sbjct: 516 GVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVA 575
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
K+M G P+ Y I+ +C +A M+EKGL P+ Y+
Sbjct: 576 ERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHS 635
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + + ++ + + TG +P+ L+ ++ +E A QL+++M+ G
Sbjct: 636 LSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPN 695
Query: 185 ILVSDVLFD--LLCDMGKLVEAEKSFLEMIEKGHKP 218
I+V + L + C G L EA K F EMI KG P
Sbjct: 696 IVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISP 731
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 111/250 (44%), Gaps = 37/250 (14%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G++PD +YN LID Y K + KA +++ +M+ ++P +Y+ +I GL KA
Sbjct: 411 GIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKA 470
Query: 65 RDVLKEM----------------KEY-------------------GCYPDAAAYNAAIRN 89
+VL +M K Y G PD YN I
Sbjct: 471 NEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIG 530
Query: 90 YCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPN 149
C AK++ +A L+ +M EKG+ PNA TY F ++ S +++ + + M+ +G +PN
Sbjct: 531 LCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPN 590
Query: 150 TQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSF 208
L+K C VE AL + M+EKG I + L GK EA F
Sbjct: 591 NVIYTILIKGHCDVGNTVE-ALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVF 649
Query: 209 LEMIEKGHKP 218
L+ ++ G P
Sbjct: 650 LKFLKTGVVP 659
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 109/230 (47%), Gaps = 7/230 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+ PDI +Y+ +I K+ + ++A + K + PDV Y S+I G G
Sbjct: 617 MLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGD 676
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNY--CIAKRLRDASGLMDEMVEKGLSPNATTY 118
+KA + EM G P+ YN I +Y C + L +A L DEM+ KG+SP+ Y
Sbjct: 677 IEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIY 736
Query: 119 NLFFRVFYWSNDLRSSWNLY--CRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDM 176
+ +L + +L+ + G L S + CK + +E A +L++DM
Sbjct: 737 CILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNS--LIDSFCKHGKVIE-ARELFDDM 793
Query: 177 VEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
V+K I+ +L D + EAE+ FL+M + P+ +++ +
Sbjct: 794 VDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSL 843
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 106/219 (48%), Gaps = 3/219 (1%)
Query: 1 MREMGVKPDIVSYNCLID--VYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLV 58
M G+ P+IV YN LI+ YCK + +A+K+ ++M + ISPD Y +I G G
Sbjct: 687 MLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKE 746
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
G +KA + E ++ +A+N+ I ++C ++ +A L D+MV+K L+PN TY
Sbjct: 747 GNLEKALSLFHEAQQKSV-GSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTY 805
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
+ + + + + L+ M +PNT + L+ + + L+ DM
Sbjct: 806 TILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEA 865
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHK 217
+G + V+ C GK +EA K + + +G K
Sbjct: 866 RGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIK 904
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 100/223 (44%), Gaps = 1/223 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E + PD+ +Y +I +CK V K ++ +M E P++ +Y + IGGL G
Sbjct: 233 MVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKE-CKPNLFTYNAFIGGLCQTGA 291
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A +V K M E G PD Y + +C KR ++A + + M GL+PN TY
Sbjct: 292 VDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTA 351
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F ++ + + M+ G N + ++ + ++ A+ L+N+M+ G
Sbjct: 352 LIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAG 411
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++L D + +A + EM + PS ++
Sbjct: 412 IEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTY 454
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 102/220 (46%), Gaps = 1/220 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G P ++ N L+ K + +K+ M + I PDV +YT++I VG K
Sbjct: 202 GFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKG 261
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ VL EM E C P+ YNA I C + +A + M+EKGL P+ TY L
Sbjct: 262 KMVLSEM-EKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDG 320
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
F + + ++ M +G PN + L+ ++ +E AL++ ++M+ +G
Sbjct: 321 FCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLN 380
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
++ + + + G++ +A F EM+ G +P ++
Sbjct: 381 VVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYN 420
>gi|222628658|gb|EEE60790.1| hypothetical protein OsJ_14375 [Oryza sativa Japonica Group]
Length = 754
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 108/223 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+ P++V+Y+ LI+ CK ++++KA +++ +M + P+ ++Y +I G G
Sbjct: 179 MEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGM 238
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++ V KEM PD N+ + C R+++A + D MV KG P+ +Y
Sbjct: 239 WKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGA 298
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + NL+ M+ G +P+ L+ R ++ +L ++ DM ++G
Sbjct: 299 LLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQG 358
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I+ + C +G+L +A + F MI+ G P +
Sbjct: 359 VNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVY 401
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 103/217 (47%), Gaps = 2/217 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P I +YN LI+ Y + R+ + + ++ + PDV SY ++I G G+ DKA D+
Sbjct: 116 PTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDL 175
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
+M+E G P+ Y++ I C K + A ++ +MV G+ PN TYN +
Sbjct: 176 FYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYST 235
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSC-MFLVKLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
S + S ++ M + +P+ +C F+ LCK +++ A +++ MV KG ++
Sbjct: 236 SGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCK-HGRIKEARDIFDSMVLKGPKPDVI 294
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
L G + + F M+ +G P + F
Sbjct: 295 SYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVF 331
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 105/226 (46%), Gaps = 3/226 (1%)
Query: 1 MREM---GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGL 57
+R+M GV+P+ ++YNCLI Y +++ ++ ++M + PDV + S + L
Sbjct: 211 LRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCK 270
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
G+ +ARD+ M G PD +Y A + Y A + L + MV +G+ P+
Sbjct: 271 HGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHV 330
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
+N + + S ++ M G P+ + ++ R +++ A++ +N M+
Sbjct: 331 FNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMI 390
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ G V L C+ LV+A++ +M+ KG P + F
Sbjct: 391 DTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKF 436
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 101/216 (46%), Gaps = 1/216 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + GV PDI++++ +I +C+ +++ A + M D + PD Y+ +I G
Sbjct: 354 MTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRD 413
Query: 61 PDKARDVLKEMKEYGCYPDAAA-YNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
KA++++ +M G P + + I N C R+ + ++D ++ G PN T+N
Sbjct: 414 LVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFN 473
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ +++ + L M G P+ + LV + +++ AL L+ DM+ K
Sbjct: 474 SLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHK 533
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
+ +++ L + + A++ F EMIE G
Sbjct: 534 RVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESG 569
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 115/281 (40%), Gaps = 41/281 (14%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISP----------------- 43
M + GV PD Y+CLI C R + KA +++ M + I P
Sbjct: 389 MIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEG 448
Query: 44 -------------------DVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYN 84
++I++ S++ G LVG +A +L M+ G PD YN
Sbjct: 449 RVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYN 508
Query: 85 AAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGT 144
+ YC R+ DA L +M+ K ++ + +YN+ + + + ++ M+ +
Sbjct: 509 TLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIES 568
Query: 145 GCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVE 203
G + + L LC R + A L + IL +++ + +G+ E
Sbjct: 569 GMAVSIHTYATVLGGLC-RNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQE 627
Query: 204 AEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSN 244
A++ F + G P+ +++R ++ K+E+ ++ N
Sbjct: 628 AKELFAAISTYGLVPTILTYR---VMITNLIKEESFEDADN 665
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/269 (20%), Positives = 116/269 (43%), Gaps = 11/269 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +GV+PDI +YN L+D YCK +++ A + M + ++ +SY I+ GL +
Sbjct: 495 MESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARR 554
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A+++ EM E G Y + C +A+ L++++ + + T+N+
Sbjct: 555 TIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNI 614
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
R + + + L+ + G +P + ++ ++E E A L++ M +
Sbjct: 615 VIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSS 674
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ + + +L + G++ +A ++ +KG P + + L + K
Sbjct: 675 CTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYI 734
Query: 241 NLSNKMALFGPSMIPKREEYLAEMSASDS 269
L +P++ +L E +A D+
Sbjct: 735 KL-----------LPEKYRFLREQAAVDN 752
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 94/224 (41%), Gaps = 12/224 (5%)
Query: 42 SPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASG 101
+P + +Y +I +PD V + G PD +YNA I + + A
Sbjct: 115 APTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHD 174
Query: 102 LMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCK 161
L +M E+G+ PN TY+ + ++ + + +M+G G PN + L+
Sbjct: 175 LFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYS 234
Query: 162 RQEKVEIALQLWNDMVEKGFGSYILVSDV-----LFDLLCDMGKLVEAEKSFLEMIEKGH 216
+ +++++ +M S +LV DV LC G++ EA F M+ KG
Sbjct: 235 TSGMWKESVRVFKEM-----SSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGP 289
Query: 217 KPSQVSFRRIKALMELANKQEALQNLSNKMALFGPSMIPKREEY 260
KP +S+ + A + NL N M G ++P R +
Sbjct: 290 KPDVISYGALLHGYATAGCIAGMDNLFNVMVCEG--VVPDRHVF 331
>gi|218184813|gb|EEC67240.1| hypothetical protein OsI_34171 [Oryza sativa Indica Group]
Length = 458
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 106/216 (49%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ P++V+Y+ +I CK + ++KA +++ M + PD ++Y+SI+ G GQP +
Sbjct: 235 ISPNVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYSSILHGYCSSGQPKEDI 294
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
L +M+ G P+ Y + + C R A + D M ++GL P+ TY + +
Sbjct: 295 GTLNKMRSDGVEPNVVTYRSLMNYLCKNGRCTKARKIFDSMTKRGLEPDIATYRTLLQGY 354
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
L L M+ G P+ L+ +QEKV+ A+ +++ M + G +
Sbjct: 355 ATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNV 414
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQV 221
+ + D+LC G + +A F +MI++G P+ +
Sbjct: 415 VCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNII 450
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 96/226 (42%), Gaps = 3/226 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDE---DISPDVISYTSIIGGLGL 57
M E+ PD+ S L+ C + + ++A +++ M D+ PDV+SYT++I G
Sbjct: 157 MTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFK 216
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
G DKA EM P+ Y++ I C A+ + A +++ MV+ G+ P+ T
Sbjct: 217 EGDSDKAYSTYHEMLGRRISPNVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMT 276
Query: 118 YNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMV 177
Y+ + S + +M G PN + L+ + + A ++++ M
Sbjct: 277 YSSILHGYCSSGQPKEDIGTLNKMRSDGVEPNVVTYRSLMNYLCKNGRCTKARKIFDSMT 336
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++G I L G LVE M+ G +P F
Sbjct: 337 KRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVF 382
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 89/228 (39%), Gaps = 41/228 (17%)
Query: 39 EDISPDVISYTSIIG----------GLGLVGQ--------------------------PD 62
++++PD+ +Y+ +IG G +G D
Sbjct: 89 DEVTPDLCTYSILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFAPLLKGLCADKRTSD 148
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEK---GLSPNATTYN 119
VL+ M E C PD + ++ C R ++A L+ M + G P+ +Y
Sbjct: 149 AMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYT 208
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVE 178
F+ D +++ Y M+G PN + + LCK Q ++ A+++ N MV+
Sbjct: 209 TVINGFFKEGDSDKAYSTYHEMLGRRISPNVVTYSSIIAALCKAQ-AMDKAMEVLNTMVK 267
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G + + C G+ E + +M G +P+ V++R +
Sbjct: 268 NGVMPDCMTYSSILHGYCSSGQPKEDIGTLNKMRSDGVEPNVVTYRSL 315
>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 670
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 122/271 (45%), Gaps = 36/271 (13%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G +P++++YN +I CK Q+++A +M ++ +PDV +Y++++ GL + D+A
Sbjct: 193 GFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEA 252
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+L EM+ GC P+ +N I L A+ L+D M KG PN TYN
Sbjct: 253 VFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHG 312
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQS-----------------CMFLVKLCKRQEKV- 166
L + +L +M+ + C+PN + L+ + +R +K
Sbjct: 313 LCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKAN 372
Query: 167 -----------------EIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFL 209
E A++LW +M EKG ++V D LC K EAE
Sbjct: 373 EYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQ 432
Query: 210 EMIEKGHKPSQVSFRRI-KALMELANKQEAL 239
EM+ KG P+ ++ + K + + Q+A+
Sbjct: 433 EMLSKGFLPNAFTYSSLMKGFFKKGDSQKAI 463
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 102/218 (46%), Gaps = 2/218 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P+ V+Y +I+ K R+ E I+ M + + Y+S+I GL G+ + A +
Sbjct: 336 PNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRL 395
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
KEM E GC P+ Y A I C ++ +A ++ EM+ KG PNA TY+ + F+
Sbjct: 396 WKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFK 455
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
D + + ++ MM N C L+ ++ AL +W M+ +G ++
Sbjct: 456 KGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVA 515
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEM--IEKGHKPSQVSF 223
+ LCD+G + + K F EM E +P V++
Sbjct: 516 YSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTY 553
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 120/276 (43%), Gaps = 36/276 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G P+ V++N LID K+ + +A K+V+ M + P+ ++Y ++I GL L G+
Sbjct: 259 MQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGK 318
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDA--------------------- 99
DKA +L++M C P+ Y I +R D
Sbjct: 319 LDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSS 378
Query: 100 --SGLM------------DEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
SGL EM EKG PN Y F + ++ M+ G
Sbjct: 379 LISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKG 438
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
LPN + L+K ++ + A+ +W +M+ + ++ VL + LC+ G+L EA
Sbjct: 439 FLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREAL 498
Query: 206 KSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQ 240
+ M+ +G KP V++ IK L ++ + + L+
Sbjct: 499 TVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLK 534
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 109/248 (43%), Gaps = 3/248 (1%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKI---VEKMRDEDISPDVISYTSIIGGLGLVG 59
++ K + S+N +++V ++ A+K V + P++++Y II L +G
Sbjct: 153 DLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLG 212
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
Q D+A D +EM C PD Y+ + C +R+ +A L+DEM +G PN T+N
Sbjct: 213 QIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFN 272
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ + DL + L M GC+PN + L+ + K++ AL L MV
Sbjct: 273 VLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSS 332
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
+ + + L + + + M E+G K ++ + + + + K E
Sbjct: 333 KCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENA 392
Query: 240 QNLSNKMA 247
L +MA
Sbjct: 393 VRLWKEMA 400
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 106/224 (47%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G K + Y+ LI K+ + E A ++ ++M ++ P+V+ Y + I GL +
Sbjct: 364 MEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEK 423
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
PD+A D+L+EM G P+A Y++ ++ + + A + EM+ + + N ++
Sbjct: 424 PDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSV 483
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDM--VE 178
S LR + ++ M+G G P+ + ++K V+ L+L+ +M E
Sbjct: 484 LLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQE 543
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
++ ++LF+ LC L A M+++G P ++
Sbjct: 544 PKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLT 587
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 87/197 (44%), Gaps = 2/197 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G KP++V Y ID C+D + ++A I+++M + P+ +Y+S++ G G
Sbjct: 399 MAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGD 458
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA V KEM + + + C + RLR+A + M+ +GL P+ Y+
Sbjct: 459 SQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSS 518
Query: 121 FFRVFYWSNDLRSSWNLYCRMM--GTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
+ + L+ M P+ + L RQ+ + A+ L N M++
Sbjct: 519 MIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLD 578
Query: 179 KGFGSYILVSDVLFDLL 195
+G L ++ + L
Sbjct: 579 EGCDPDSLTCNIFLETL 595
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 85/183 (46%), Gaps = 24/183 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++ ++V + L++ C+ ++ +A + M E + PDV++Y+S+I GL VG
Sbjct: 469 MMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGS 528
Query: 61 PDKARDVLKEMK--EYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
DK + EM+ E PD YN C L A L++ M+++G P++ T
Sbjct: 529 VDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTC 588
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFL----VKLCKRQEKVEIALQLWN 174
N+F LR N P +FL V+L KR+ K+ AL++
Sbjct: 589 NIFLET------LRERIN-----------PPQDGRLFLDELVVRLLKRERKLS-ALRIVE 630
Query: 175 DMV 177
+M+
Sbjct: 631 EML 633
>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g61990, mitochondrial; Flags: Precursor
gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 974
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/229 (32%), Positives = 111/229 (48%), Gaps = 3/229 (1%)
Query: 12 SYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEM 71
+Y ++ C ++ AY IV++M P+V+ YT++I + A VLKEM
Sbjct: 419 TYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM 478
Query: 72 KEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDL 131
KE G PD YN+ I AKR+ +A + EMVE GL PNA TY F + +++
Sbjct: 479 KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEF 538
Query: 132 RSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEKGFGSYILVSDV 190
S+ M G LPN C L+ + CK+ + +E A + MV++G V
Sbjct: 539 ASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIE-ACSAYRSMVDQGILGDAKTYTV 597
Query: 191 LFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEA 238
L + L K+ +AE+ F EM KG P S+ I +L N Q+A
Sbjct: 598 LMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKA 646
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 127/273 (46%), Gaps = 9/273 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ D +Y L++ K+ +V+ A +I +MR + I+PDV SY +I G +G
Sbjct: 583 MVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGN 642
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA + EM E G P+ YN + +C + + A L+DEM KGL PNA TY
Sbjct: 643 MQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCT 702
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ S DL ++ L+ M G +P++ LV C R VE A+ ++ +KG
Sbjct: 703 IIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTN-KKG 761
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGH-----KPSQVSFRRIKALMELANK 235
S + L + + GK E + L + G KP+ V++ + +
Sbjct: 762 CASSTAPFNALINWVFKFGK-TELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGN 820
Query: 236 QEALQNLSNKMALFGPSMIPKREEYLAEMSASD 268
EA + L ++M +++P Y + ++ D
Sbjct: 821 LEAAKELFHQMQ--NANLMPTVITYTSLLNGYD 851
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 120/246 (48%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G +P++V Y LI + ++ + A +++++M+++ I+PD+ Y S+I GL + D+A
Sbjct: 447 GCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEA 506
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
R L EM E G P+A Y A I Y A A + EM E G+ PN
Sbjct: 507 RSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINE 566
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + + + Y M+ G L + ++ L+ + +KV+ A +++ +M KG
Sbjct: 567 YCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPD 626
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSN 244
+ VL + +G + +A F EM+E+G P+ + + + + + E + L +
Sbjct: 627 VFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLD 686
Query: 245 KMALFG 250
+M++ G
Sbjct: 687 EMSVKG 692
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 105/227 (46%), Gaps = 3/227 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MRE GV P+ V LI+ YCK +V +A M D+ I D +YT ++ GL +
Sbjct: 548 MRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDK 607
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A ++ +EM+ G PD +Y I + ++ AS + DEMVE+GL+PN YN+
Sbjct: 608 VDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNM 667
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEK 179
F S ++ + L M G PN + C + CK + E A +L+++M K
Sbjct: 668 LLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAE-AFRLFDEMKLK 726
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G V L D C + VE + +KG S F +
Sbjct: 727 GLVPDSFVYTTLVDGCCRLND-VERAITIFGTNKKGCASSTAPFNAL 772
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 111/223 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E G+ PDI YN LI K +++++A + +M + + P+ +Y + I G +
Sbjct: 478 MKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASE 537
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +KEM+E G P+ I YC ++ +A MV++G+ +A TY +
Sbjct: 538 FASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTV 597
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ + + ++ M G G P+ S L+ + ++ A ++++MVE+G
Sbjct: 598 LMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG 657
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+++ ++L C G++ +A++ EM KG P+ V++
Sbjct: 658 LTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTY 700
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 101/223 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +GV D +Y+ LID K R + A +V +M I+ Y I + G
Sbjct: 303 MDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGV 362
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA+ + M G P A AY + I YC K +R L+ EM ++ + + TY
Sbjct: 363 MEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGT 422
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ S DL ++N+ M+ +GC PN L+K + + A+++ +M E+G
Sbjct: 423 VVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG 482
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I + L L ++ EA +EM+E G KP+ ++
Sbjct: 483 IAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTY 525
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
KP+ V+YN +ID CK+ +E A ++ +M++ ++ P VI+YTS++ G +G+ +
Sbjct: 802 KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFP 861
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEK 109
V E G PD Y+ I + A L+D+M K
Sbjct: 862 VFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAK 904
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 87/218 (39%), Gaps = 2/218 (0%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
+ +KP + Y+C I V K+ +EKA + + M + P +Y S+I G +
Sbjct: 343 INIKPYM--YDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQ 400
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
++L EMK+ Y ++ C + L A ++ EM+ G PN Y +
Sbjct: 401 GYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIK 460
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
F ++ + + M G P+ L+ + ++++ A +MVE G
Sbjct: 461 TFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKP 520
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQV 221
+ + A+K EM E G P++V
Sbjct: 521 NAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKV 558
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 107/264 (40%), Gaps = 22/264 (8%)
Query: 1 MREMGVKPDIVSYNCLIDVYCK---------------------DRQVEKAYKIVEKMRDE 39
M E V D+ +Y+ LI +C+ V+ A K+ E M +
Sbjct: 212 MVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICK 271
Query: 40 DISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDA 99
+ P +Y +I GL + + + A+ +L EM G D Y+ I + A
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAA 331
Query: 100 SGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKL 159
GL+ EMV G++ Y+ V + + L+ M+ +G +P Q+ L++
Sbjct: 332 KGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEG 391
Query: 160 CKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
R++ V +L +M ++ + +C G L A EMI G +P+
Sbjct: 392 YCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPN 451
Query: 220 QVSFRR-IKALMELANKQEALQNL 242
V + IK ++ + +A++ L
Sbjct: 452 VVIYTTLIKTFLQNSRFGDAMRVL 475
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 48/98 (48%), Gaps = 5/98 (5%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPD-----VISYTSIIGGLGLVG 59
G++PD + Y+ +I+ + K+ KA +V++M ++ D + + +++ G VG
Sbjct: 870 GIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVG 929
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLR 97
+ + A V++ M PD+A I CI+ R
Sbjct: 930 EMEVAEKVMENMVRLQYIPDSATVIELINESCISSNQR 967
>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/229 (32%), Positives = 111/229 (48%), Gaps = 3/229 (1%)
Query: 12 SYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEM 71
+Y ++ C ++ AY IV++M P+V+ YT++I + A VLKEM
Sbjct: 419 TYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM 478
Query: 72 KEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDL 131
KE G PD YN+ I AKR+ +A + EMVE GL PNA TY F + +++
Sbjct: 479 KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEF 538
Query: 132 RSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEKGFGSYILVSDV 190
S+ M G LPN C L+ + CK+ + +E A + MV++G V
Sbjct: 539 ASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIE-ACSAYRSMVDQGILGDAKTYTV 597
Query: 191 LFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEA 238
L + L K+ +AE+ F EM KG P S+ I +L N Q+A
Sbjct: 598 LMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKA 646
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 127/273 (46%), Gaps = 9/273 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ D +Y L++ K+ +V+ A +I +MR + I+PDV SY +I G +G
Sbjct: 583 MVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGN 642
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA + EM E G P+ YN + +C + + A L+DEM KGL PNA TY
Sbjct: 643 MQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCT 702
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ S DL ++ L+ M G +P++ LV C R VE A+ ++ +KG
Sbjct: 703 IIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTN-KKG 761
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGH-----KPSQVSFRRIKALMELANK 235
S + L + + GK E + L + G KP+ V++ + +
Sbjct: 762 CASSTAPFNALINWVFKFGK-TELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGN 820
Query: 236 QEALQNLSNKMALFGPSMIPKREEYLAEMSASD 268
EA + L ++M +++P Y + ++ D
Sbjct: 821 LEAAKELFHQMQ--NANLMPTVITYTSLLNGYD 851
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 120/246 (48%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G +P++V Y LI + ++ + A +++++M+++ I+PD+ Y S+I GL + D+A
Sbjct: 447 GCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEA 506
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
R L EM E G P+A Y A I Y A A + EM E G+ PN
Sbjct: 507 RSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINE 566
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + + + Y M+ G L + ++ L+ + +KV+ A +++ +M KG
Sbjct: 567 YCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPD 626
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSN 244
+ VL + +G + +A F EM+E+G P+ + + + + + E + L +
Sbjct: 627 VFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLD 686
Query: 245 KMALFG 250
+M++ G
Sbjct: 687 EMSVKG 692
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 105/227 (46%), Gaps = 3/227 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MRE GV P+ V LI+ YCK +V +A M D+ I D +YT ++ GL +
Sbjct: 548 MRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDK 607
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A ++ +EM+ G PD +Y I + ++ AS + DEMVE+GL+PN YN+
Sbjct: 608 VDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNM 667
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEK 179
F S ++ + L M G PN + C + CK + E A +L+++M K
Sbjct: 668 LLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAE-AFRLFDEMKLK 726
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G V L D C + VE + +KG S F +
Sbjct: 727 GLVPDSFVYTTLVDGCCRLND-VERAITIFGTNKKGCASSTAPFNAL 772
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 111/223 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E G+ PDI YN LI K +++++A + +M + + P+ +Y + I G +
Sbjct: 478 MKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASE 537
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +KEM+E G P+ I YC ++ +A MV++G+ +A TY +
Sbjct: 538 FASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTV 597
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ + + ++ M G G P+ S L+ + ++ A ++++MVE+G
Sbjct: 598 LMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG 657
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+++ ++L C G++ +A++ EM KG P+ V++
Sbjct: 658 LTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTY 700
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 101/223 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +GV D +Y+ LID K R + A +V +M I+ Y I + G
Sbjct: 303 MDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGV 362
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA+ + M G P A AY + I YC K +R L+ EM ++ + + TY
Sbjct: 363 MEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGT 422
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ S DL ++N+ M+ +GC PN L+K + + A+++ +M E+G
Sbjct: 423 VVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG 482
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I + L L ++ EA +EM+E G KP+ ++
Sbjct: 483 IAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTY 525
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
KP+ V+YN +ID CK+ +E A ++ +M++ ++ P VI+YTS++ G +G+ +
Sbjct: 802 KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFP 861
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEK 109
V E G PD Y+ I + A L+D+M K
Sbjct: 862 VFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAK 904
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 87/218 (39%), Gaps = 2/218 (0%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
+ +KP + Y+C I V K+ +EKA + + M + P +Y S+I G +
Sbjct: 343 INIKPYM--YDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQ 400
Query: 64 ARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFR 123
++L EMK+ Y ++ C + L A ++ EM+ G PN Y +
Sbjct: 401 GYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIK 460
Query: 124 VFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGS 183
F ++ + + M G P+ L+ + ++++ A +MVE G
Sbjct: 461 TFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKP 520
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQV 221
+ + A+K EM E G P++V
Sbjct: 521 NAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKV 558
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 107/264 (40%), Gaps = 22/264 (8%)
Query: 1 MREMGVKPDIVSYNCLIDVYCK---------------------DRQVEKAYKIVEKMRDE 39
M E V D+ +Y+ LI +C+ V+ A K+ E M +
Sbjct: 212 MVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICK 271
Query: 40 DISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDA 99
+ P +Y +I GL + + + A+ +L EM G D Y+ I + A
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAA 331
Query: 100 SGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKL 159
GL+ EMV G++ Y+ V + + L+ M+ +G +P Q+ L++
Sbjct: 332 KGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEG 391
Query: 160 CKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
R++ V +L +M ++ + +C G L A EMI G +P+
Sbjct: 392 YCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPN 451
Query: 220 QVSFRR-IKALMELANKQEALQNL 242
V + IK ++ + +A++ L
Sbjct: 452 VVIYTTLIKTFLQNSRFGDAMRVL 475
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 48/98 (48%), Gaps = 5/98 (5%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPD-----VISYTSIIGGLGLVG 59
G++PD + Y+ +I+ + K+ KA +V++M ++ D + + +++ G VG
Sbjct: 870 GIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVG 929
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLR 97
+ + A V++ M PD+A I CI+ R
Sbjct: 930 EMEVAEKVMENMVRLQYIPDSATVIELINESCISSNQR 967
>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
Length = 977
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 110/229 (48%), Gaps = 3/229 (1%)
Query: 12 SYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEM 71
+Y + C ++ AY IV++M P+V+ YT++I + A VLKEM
Sbjct: 422 TYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEM 481
Query: 72 KEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDL 131
+E G PD YN+ I AK++ +A + EMVE G P+A TY F + + +
Sbjct: 482 REQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEF 541
Query: 132 RSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEKGFGSYILVSDV 190
S+ M+ G +PN C L+ + CK+ + +E A + MVE+G V
Sbjct: 542 ASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIE-ACSAFRSMVEQGILGDAKTYTV 600
Query: 191 LFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEA 238
L + L GK+ +AE+ F EM KG P S+ I +L N Q+A
Sbjct: 601 LMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKA 649
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 112/247 (45%), Gaps = 3/247 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E GV P+ V LI+ YCK +V +A M ++ I D +YT ++ GL G+
Sbjct: 551 MLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGK 610
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A ++ EM+ G PD +Y I + ++ AS + DEMV+ GL+ N YN+
Sbjct: 611 VNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNM 670
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEK 179
F S ++ + L M G G PN + C + CK + E A QL+++M K
Sbjct: 671 LLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAE-AFQLFDEMKLK 729
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
G V L D C + VE + E EKG S F + + K E
Sbjct: 730 GLVPDSFVYTTLVDGCCRLND-VERAITIFETNEKGCASSSAPFNALINWVFKFGKTELT 788
Query: 240 QNLSNKM 246
++ N++
Sbjct: 789 TDMINRL 795
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 118/258 (45%), Gaps = 35/258 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G +P++V Y LI + + + A +++++MR++ I+PD Y S+I GL +
Sbjct: 446 MGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKK 505
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDA-------------------SG 101
D+AR L EM E G PDA Y A I Y A A +G
Sbjct: 506 MDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTG 565
Query: 102 LMDE----------------MVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
L++E MVE+G+ +A TY + + + + ++ M G G
Sbjct: 566 LINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKG 625
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
P+ S L+ + ++ A ++++MV+ G S +++ ++L C G++ +A+
Sbjct: 626 IAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAK 685
Query: 206 KSFLEMIEKGHKPSQVSF 223
+ EM KG P+ V++
Sbjct: 686 ELLDEMSGKGFPPNAVTY 703
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 114/265 (43%), Gaps = 40/265 (15%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+ D +Y L++ K+ +V A +I +MR + I+PDV SY ++I G +G
Sbjct: 586 MVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGN 645
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA + EM + G + YN + +C + + A L+DEM KG PNA TY
Sbjct: 646 MQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCT 705
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ S DL ++ L+ M G +P++ LV C R VE A+ ++ + EKG
Sbjct: 706 IIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF-ETNEKG 764
Query: 181 -----------------FGSYILVSD----------------------VLFDLLCDMGKL 201
FG L +D ++ D LC G L
Sbjct: 765 CASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNL 824
Query: 202 VEAEKSFLEMIEKGHKPSQVSFRRI 226
A++ F M + P+ +++ +
Sbjct: 825 EAAKELFHHMQKANLMPTVITYTSL 849
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 101/223 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G+ D V+Y+ LID K R + A +V +M S D + Y I + G
Sbjct: 306 MNSVGLFADNVAYSILIDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGA 365
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA+ + M +G P A AY + I + K +R L+ E+ ++ + + TY
Sbjct: 366 MEKAKALFDGMITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGT 425
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ S DL ++N+ M +GC PN L+K ++ + A+++ +M E+G
Sbjct: 426 AVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQG 485
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ L L K+ EA LEM+E G KP ++
Sbjct: 486 IAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTY 528
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 111/268 (41%), Gaps = 30/268 (11%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDE--------------------- 39
M E V D+ SY LI +C+D V+ A ++ K +E
Sbjct: 215 MVERNVVFDVQSYEMLIGAHCRDGNVQLAKDVLLKTEEELGTATLNVDEALELKKSMSCK 274
Query: 40 DISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDA 99
+ P SY +I GL + + A+ +L EM G + D AY+ I + A
Sbjct: 275 GLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADAA 334
Query: 100 SGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKL 159
+GL+ EMV G S + Y+ F V + + L+ M+ G P ++ L++
Sbjct: 335 NGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEG 394
Query: 160 CKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDL----LCDMGKLVEAEKSFLEMIEKG 215
R++ V +L ++ ++ I++S + +C G L A EM G
Sbjct: 395 FFREKNVRKGYELLVEIKKRN----IVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASG 450
Query: 216 HKPSQVSFRR-IKALMELANKQEALQNL 242
+P+ V + IK ++ + +A++ L
Sbjct: 451 CRPNVVIYTTLIKTFLQKSRFGDAVRVL 478
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 53/103 (51%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
KP+ V+YN +ID CK+ +E A ++ M+ ++ P VI+YTS++ G +G+ +
Sbjct: 805 KPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFS 864
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEK 109
V E+ G PD Y+ I + A L+D+M K
Sbjct: 865 VFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAK 907
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 79/199 (39%), Gaps = 21/199 (10%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
++ + P + N L+D K +++ + + + M + ++ DV SY +IG G
Sbjct: 182 DLDLVPSLARCNHLLDALLKRNRLDLFWDVYKGMVERNVVFDVQSYEMLIGAHCRDGNVQ 241
Query: 63 KARDVL---------------------KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASG 101
A+DVL K M G P +YN I C KRL DA
Sbjct: 242 LAKDVLLKTEEELGTATLNVDEALELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKS 301
Query: 102 LMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCK 161
L+ EM GL + Y++ + ++ L M+ G + + + +
Sbjct: 302 LLVEMNSVGLFADNVAYSILIDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMS 361
Query: 162 RQEKVEIALQLWNDMVEKG 180
++ +E A L++ M+ G
Sbjct: 362 KEGAMEKAKALFDGMITFG 380
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 51/262 (19%), Positives = 92/262 (35%), Gaps = 45/262 (17%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P+ V+Y +ID YCK + +A+++ ++M+ + + PD YT+++ G +
Sbjct: 691 MSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLND 750
Query: 61 PDKARDVLKEMKEYGCY---------------------------------------PDAA 81
++A + E E GC P+
Sbjct: 751 VERAITIF-ETNEKGCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDV 809
Query: 82 AYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRM 141
YN I C L A L M + L P TY + ++++ +
Sbjct: 810 TYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEV 869
Query: 142 MGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDM-----VEKGFGSYILVSDVLFDLLC 196
+ G P+ ++ ++ AL L + M V+ G I L
Sbjct: 870 IAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSISTCRALLSGFA 929
Query: 197 DMGKLVEAEKSFLEMIEKGHKP 218
+G++ AEK M+ + P
Sbjct: 930 KVGEMEVAEKVVENMVRLKYIP 951
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/101 (22%), Positives = 50/101 (49%), Gaps = 5/101 (4%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPD-----VISYTSIIGGLGLVG 59
G++PD + Y+ +I+ + K+ KA ++++M ++ D + + +++ G VG
Sbjct: 873 GIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSISTCRALLSGFAKVG 932
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDAS 100
+ + A V++ M PD++ I CI+ R A+
Sbjct: 933 EMEVAEKVVENMVRLKYIPDSSTVIELINESCISSNQRMAA 973
>gi|255660970|gb|ACU25654.1| pentatricopeptide repeat-containing protein [Verbena bonariensis]
Length = 350
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 110/241 (45%), Gaps = 3/241 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E G D ++Y L+ +CK+ ++K+ ++E + D +Y+++I GL
Sbjct: 59 MKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEAN 118
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A VL M + GC P+ YN I A + DA + EM SP TYN
Sbjct: 119 LDRAVSVLNGMIKSGCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNT 178
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + ++NL ++ G P + L++ KVE ALQLWN + KG
Sbjct: 179 LINGFCKNKMFGEAYNLVKELLDKGLDPGVITYSMLMEGLCFDHKVERALQLWNQVTSKG 238
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
F + + ++L LC +GK+ A + +M P+ VS LME K ++
Sbjct: 239 FKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHN---TLMEGFYKDGDIR 295
Query: 241 N 241
N
Sbjct: 296 N 296
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 92/181 (50%), Gaps = 3/181 (1%)
Query: 2 REMGV---KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLV 58
REMG P I++YN LI+ +CK++ +AY +V+++ D+ + P VI+Y+ ++ GL
Sbjct: 162 REMGTMHCSPTIITYNTLINGFCKNKMFGEAYNLVKELLDKGLDPGVITYSMLMEGLCFD 221
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
+ ++A + ++ G PD +N I C +++ A L +M +PN ++
Sbjct: 222 HKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSH 281
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
N FY D+R++ ++ R++ G P+ S ++ ++ A+ +D V
Sbjct: 282 NTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLEGLCSCNRISDAILFLHDAVT 341
Query: 179 K 179
K
Sbjct: 342 K 342
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 92/204 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G KP++ YN LI+ + E A ++ +M SP +I+Y ++I G
Sbjct: 129 MIKSGCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGFCKNKM 188
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A +++KE+ + G P Y+ + C ++ A L +++ KG P+ +N+
Sbjct: 189 FGEAYNLVKELLDKGLDPGVITYSMLMEGLCFDHKVERALQLWNQVTSKGFKPDVQMHNI 248
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++ + +LY M C PN S L++ + + AL +W ++ G
Sbjct: 249 LIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNG 308
Query: 181 FGSYILVSDVLFDLLCDMGKLVEA 204
I+ ++ + LC ++ +A
Sbjct: 309 LEPDIISYNITLEGLCSCNRISDA 332
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/234 (19%), Positives = 101/234 (43%), Gaps = 1/234 (0%)
Query: 14 NCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKE 73
N ++ Y + +++ +++ E M E + V S+ +++ GL G+ D+ + + MKE
Sbjct: 3 NAMLKGYFRVAKIKDCFELWEMMGSEG-NRSVSSFNTMMRGLFDNGKVDEVISIWELMKE 61
Query: 74 YGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRS 133
G D+ Y + +C + + +++ +KG +A Y+ +L
Sbjct: 62 SGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDR 121
Query: 134 SWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFD 193
+ ++ M+ +GC PN L+ K E A++++ +M I+ + L +
Sbjct: 122 AVSVLNGMIKSGCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLIN 181
Query: 194 LLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMA 247
C EA E+++KG P +++ + + +K E L N++
Sbjct: 182 GFCKNKMFGEAYNLVKELLDKGLDPGVITYSMLMEGLCFDHKVERALQLWNQVT 235
>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 646
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 120/271 (44%), Gaps = 36/271 (13%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G +P++++YN +I CK Q+++A +M ++ +PDV +Y++++ GL + D+A
Sbjct: 169 GFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEA 228
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+L EM+ GC P+ +N I L A+ L+D M KG PN TYN
Sbjct: 229 VFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHG 288
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQE-------------------- 164
L + +L +M+ + C+PN + ++ +Q
Sbjct: 289 LCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKAN 348
Query: 165 ---------------KVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFL 209
K E A++LW +M EKG ++V D LC K EAE
Sbjct: 349 EYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQ 408
Query: 210 EMIEKGHKPSQVSFRRI-KALMELANKQEAL 239
EM+ KG P+ ++ + K + + Q+A+
Sbjct: 409 EMLSKGFLPNAFTYSSLMKGFFKKGDSQKAI 439
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 102/218 (46%), Gaps = 2/218 (0%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P+ V+Y +I+ K R+ E I+ M + + Y+S+I GL G+ + A +
Sbjct: 312 PNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRL 371
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
KEM E GC P+ Y A I C ++ +A ++ EM+ KG PNA TY+ + F+
Sbjct: 372 WKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFK 431
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
D + + ++ MM N C L+ ++ AL +W M+ +G ++
Sbjct: 432 KGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVA 491
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEM--IEKGHKPSQVSF 223
+ LCD+G + + K F EM E +P V++
Sbjct: 492 YSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTY 529
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 120/276 (43%), Gaps = 36/276 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G P+ V++N LID K+ + +A K+V+ M + P+ ++Y ++I GL L G+
Sbjct: 235 MQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGK 294
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDA--------------------- 99
DKA +L++M C P+ Y I +R D
Sbjct: 295 LDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSS 354
Query: 100 --SGLM------------DEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
SGL EM EKG PN Y F + ++ M+ G
Sbjct: 355 LISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKG 414
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
LPN + L+K ++ + A+ +W +M+ + ++ VL + LC+ G+L EA
Sbjct: 415 FLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREAL 474
Query: 206 KSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQ 240
+ M+ +G KP V++ IK L ++ + + L+
Sbjct: 475 TVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLK 510
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 109/248 (43%), Gaps = 3/248 (1%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKI---VEKMRDEDISPDVISYTSIIGGLGLVG 59
++ K + S+N +++V ++ A+K V + P++++Y II L +G
Sbjct: 129 DLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLG 188
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
Q D+A D +EM C PD Y+ + C +R+ +A L+DEM +G PN T+N
Sbjct: 189 QIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFN 248
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ + DL + L M GC+PN + L+ + K++ AL L MV
Sbjct: 249 VLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSS 308
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
+ + + L + + + M E+G K ++ + + + + K E
Sbjct: 309 KCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENA 368
Query: 240 QNLSNKMA 247
L +MA
Sbjct: 369 VRLWKEMA 376
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 106/224 (47%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G K + Y+ LI K+ + E A ++ ++M ++ P+V+ Y + I GL +
Sbjct: 340 MEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEK 399
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
PD+A D+L+EM G P+A Y++ ++ + + A + EM+ + + N ++
Sbjct: 400 PDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSV 459
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDM--VE 178
S LR + ++ M+G G P+ + ++K V+ L+L+ +M E
Sbjct: 460 LLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQE 519
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
++ ++LF+ LC L A M+++G P ++
Sbjct: 520 PKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLT 563
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 87/197 (44%), Gaps = 2/197 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G KP++V Y ID C+D + ++A I+++M + P+ +Y+S++ G G
Sbjct: 375 MAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGD 434
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA V KEM + + + C + RLR+A + M+ +GL P+ Y+
Sbjct: 435 SQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSS 494
Query: 121 FFRVFYWSNDLRSSWNLYCRMM--GTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
+ + L+ M P+ + L RQ+ + A+ L N M++
Sbjct: 495 MIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLD 554
Query: 179 KGFGSYILVSDVLFDLL 195
+G L ++ + L
Sbjct: 555 EGCDPDSLTCNIFLETL 571
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 85/183 (46%), Gaps = 24/183 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++ ++V + L++ C+ ++ +A + M E + PDV++Y+S+I GL VG
Sbjct: 445 MMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGS 504
Query: 61 PDKARDVLKEMK--EYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
DK + EM+ E PD YN C L A L++ M+++G P++ T
Sbjct: 505 VDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTC 564
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFL----VKLCKRQEKVEIALQLWN 174
N+F LR N P +FL V+L KR+ K+ AL++
Sbjct: 565 NIFLET------LRERIN-----------PPQDGRLFLDELVVRLLKRERKLS-ALRIVE 606
Query: 175 DMV 177
+M+
Sbjct: 607 EML 609
>gi|255660990|gb|ACU25664.1| pentatricopeptide repeat-containing protein [Glandularia incisa]
Length = 376
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 111/241 (46%), Gaps = 3/241 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G D ++Y L+ +CK+ ++K+ ++E + + D +Y+++I GL
Sbjct: 85 MKKSGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAQQKGGVLDAFAYSAMINGLCKEAN 144
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A VL M + GC P+A YN I A + DA + EM SP TYN
Sbjct: 145 LDRAVSVLNGMIKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNT 204
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++NL ++ G P + L+K KVE ALQLWN + KG
Sbjct: 205 LINGLCKNEMFGEAYNLVKELLDKGLNPGVITYSMLMKGLCLDHKVEKALQLWNQVTSKG 264
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
F + + ++L LC +GK+ A + +M P+ VS LME K ++
Sbjct: 265 FKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHN---TLMEGFYKDGDIR 321
Query: 241 N 241
N
Sbjct: 322 N 322
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 92/181 (50%), Gaps = 3/181 (1%)
Query: 2 REMGV---KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLV 58
REMG P I++YN LI+ CK+ +AY +V+++ D+ ++P VI+Y+ ++ GL L
Sbjct: 188 REMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLNPGVITYSMLMKGLCLD 247
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
+ +KA + ++ G PD +N I C +++ A L +M +PN ++
Sbjct: 248 HKVEKALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSH 307
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
N FY D+R++ ++ R++ G P+ S +K ++ A+ +D V
Sbjct: 308 NTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGLCSCNRISDAILFLHDAVT 367
Query: 179 K 179
K
Sbjct: 368 K 368
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 93/204 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G KP+ YN LI+ + E A ++ +M SP +I+Y ++I GL
Sbjct: 155 MIKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEM 214
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A +++KE+ + G P Y+ ++ C+ ++ A L +++ KG P+ +N+
Sbjct: 215 FGEAYNLVKELLDKGLNPGVITYSMLMKGLCLDHKVEKALQLWNQVTSKGFKPDVQMHNI 274
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++ + +LY M C PN S L++ + + AL +W ++ G
Sbjct: 275 LIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNG 334
Query: 181 FGSYILVSDVLFDLLCDMGKLVEA 204
I+ ++ LC ++ +A
Sbjct: 335 LEPDIISYNITLKGLCSCNRISDA 358
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 109/245 (44%), Gaps = 1/245 (0%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E V PD V YN +++ Y + +++ +++ E M E + V S+ ++ GL G+ D
Sbjct: 18 ESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEG-NRSVSSFNIMMRGLFDNGKVD 76
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
+ + + MK+ G D+ Y + +C + + +++ +KG +A Y+
Sbjct: 77 EVISIWELMKKSGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAQQKGGVLDAFAYSAMI 136
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
+L + ++ M+ +GC PN L+ K E A++++ +M
Sbjct: 137 NGLCKEANLDRAVSVLNGMIKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTMHCS 196
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNL 242
I+ + L + LC EA E+++KG P +++ + + L +K E L
Sbjct: 197 PTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLNPGVITYSMLMKGLCLDHKVEKALQL 256
Query: 243 SNKMA 247
N++
Sbjct: 257 WNQVT 261
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 80/183 (43%), Gaps = 2/183 (1%)
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
G D A V KE+ E PDA YNA + Y +++D L + M +G + + +++
Sbjct: 4 GDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEG-NRSVSSF 62
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
N+ R + + + +++ M +G + ++ + LV + ++ +L + +
Sbjct: 63 NIMMRGLFDNGKVDEVISIWELMKKSGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAQQ 122
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP-SQVSFRRIKALMELANKQE 237
KG + + LC L A MI+ G KP + V I L+ + ++
Sbjct: 123 KGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNAHVYNTLINGLVGASKFED 182
Query: 238 ALQ 240
A++
Sbjct: 183 AIR 185
>gi|115482710|ref|NP_001064948.1| Os10g0495100 [Oryza sativa Japonica Group]
gi|22128714|gb|AAM92826.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
gi|31432837|gb|AAP54424.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639557|dbj|BAF26862.1| Os10g0495100 [Oryza sativa Japonica Group]
gi|125575261|gb|EAZ16545.1| hypothetical protein OsJ_32018 [Oryza sativa Japonica Group]
Length = 461
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 114/251 (45%), Gaps = 35/251 (13%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PD+V YN +I+ + K+ +KAY +M D+ I PDV++Y+SII L DKA +V
Sbjct: 190 PDVVLYNTVINGFFKEGDPDKAYATYHEMFDQGILPDVVTYSSIIAALCKAQAMDKAMEV 249
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF----- 122
L M + G P+ YN+ + YC + +L +A G + M G+ P+ T NL
Sbjct: 250 LNTMVKNGVMPNCRTYNSIVHGYCSSGQLTEAIGFLKMMCSDGVEPDVVTCNLLMDYLCK 309
Query: 123 --------RVFYWSN--DLRSSWNLYCR--------------------MMGTGCLPNTQS 152
++F L+ YC M+ G PN
Sbjct: 310 NRRCTEARKIFNSMTKCGLKPDITTYCTLLQGYATKGALVEMHDLLDLMVWNGIQPNHHV 369
Query: 153 CMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMI 212
L+ +QEKV+ A+ +++ M ++G + + D+LC +G++ +A + +MI
Sbjct: 370 FNILICAYAKQEKVDEAMLVFSKMRQQGLSPNAVNYRTVIDVLCKLGRVYDAVLTLKQMI 429
Query: 213 EKGHKPSQVSF 223
+G P + +
Sbjct: 430 NEGLTPDIIVY 440
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 104/226 (46%), Gaps = 4/226 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDE--DISPDVISYTSIIGGLGLV 58
M ++G P++ S L+ C + + ++A ++++ M D+ D PDV+ Y ++I G
Sbjct: 146 MTQLGCIPNVFSCTILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVLYNTVINGFFKE 205
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
G PDKA EM + G PD Y++ I C A+ + A +++ MV+ G+ PN TY
Sbjct: 206 GDPDKAYATYHEMFDQGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPNCRTY 265
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMV 177
N + S L + M G P+ +C L+ LCK + E A +++N M
Sbjct: 266 NSIVHGYCSSGQLTEAIGFLKMMCSDGVEPDVVTCNLLMDYLCKNRRCTE-ARKIFNSMT 324
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ G I L G LVE M+ G +P+ F
Sbjct: 325 KCGLKPDITTYCTLLQGYATKGALVEMHDLLDLMVWNGIQPNHHVF 370
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G++P+ +N LI Y K +V++A + KMR + +SP+ ++Y ++I L +G+ A
Sbjct: 362 GIQPNHHVFNILICAYAKQEKVDEAMLVFSKMRQQGLSPNAVNYRTVIDVLCKLGRVYDA 421
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLM 103
LK+M G PD Y I +C + A L+
Sbjct: 422 VLTLKQMINEGLTPDIIVYTPLIHGFCTCDKWEKAEELI 460
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 43/68 (63%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G+ P+ V+Y +IDV CK +V A +++M +E ++PD+I YT +I G +
Sbjct: 393 MRQQGLSPNAVNYRTVIDVLCKLGRVYDAVLTLKQMINEGLTPDIIVYTPLIHGFCTCDK 452
Query: 61 PDKARDVL 68
+KA +++
Sbjct: 453 WEKAEELI 460
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 87/232 (37%), Gaps = 40/232 (17%)
Query: 30 YKIVEKMRDEDISPDVISYTSIIG----------GLGLVGQ------------------- 60
Y + + ++++P++ +Y+ +IG G +G
Sbjct: 69 YNRMARAGADEVTPNLYTYSVLIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKG 128
Query: 61 -------PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKG--L 111
D VL M + GC P+ + ++ C R ++A L+ M + G
Sbjct: 129 LCADKRTSDAMDIVLCRMTQLGCIPNVFSCTILLKGLCDENRSQEALELLQMMPDDGGDC 188
Query: 112 SPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIAL 170
P+ YN F+ D ++ Y M G LP+ + + LCK Q ++ A+
Sbjct: 189 PPDVVLYNTVINGFFKEGDPDKAYATYHEMFDQGILPDVVTYSSIIAALCKAQ-AMDKAM 247
Query: 171 QLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
++ N MV+ G + + C G+L EA M G +P V+
Sbjct: 248 EVLNTMVKNGVMPNCRTYNSIVHGYCSSGQLTEAIGFLKMMCSDGVEPDVVT 299
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 74/176 (42%), Gaps = 3/176 (1%)
Query: 78 PDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNL 137
P+ Y+ I C A RL + +++KG A T+ + + ++
Sbjct: 82 PNLYTYSVLIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSDAMDI 141
Query: 138 Y-CRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY--ILVSDVLFDL 194
CRM GC+PN SC L+K + + + AL+L M + G +++ + + +
Sbjct: 142 VLCRMTQLGCIPNVFSCTILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVLYNTVING 201
Query: 195 LCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFG 250
G +A ++ EM ++G P V++ I A + A + + N M G
Sbjct: 202 FFKEGDPDKAYATYHEMFDQGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNG 257
>gi|326531238|dbj|BAK04970.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 660
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 120/261 (45%), Gaps = 35/261 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +MG+KPD+V+ LI CK+ +VE+A+++ +M +I V Y ++I G G
Sbjct: 321 MVKMGLKPDVVACGALIFGLCKNSKVEEAFELASRMLSLNIELSVSIYNALISGFWRAGS 380
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA ++ M+ GC P YN + +YC + A L+ +M G++P+ +YN
Sbjct: 381 IDKAYTIISFMRTNGCEPGVVTYNILLNHYCTIGMMEKAENLITKMETSGVNPDRYSYNQ 440
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++ L ++ M G + SC L+ + +KV+ AL+L+ +M KG
Sbjct: 441 LLKGLCKTHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCKVKKVKSALELFKEMDYKG 500
Query: 181 -------FGSYI--LVS--------------------------DVLFDLLCDMGKLVEAE 205
+G+ I L S +++ LC +G L A+
Sbjct: 501 MQADAVTYGTLINGLFSVGYYNLAEELFEQMLKAQIDPNVNLYNIMLHHLCKVGDLKRAQ 560
Query: 206 KSFLEMIEKGHKPSQVSFRRI 226
K FL MI+K P V++ +
Sbjct: 561 KIFLHMIQKEILPDIVTYNTL 581
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 108/225 (48%), Gaps = 2/225 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G +P +V+YN L++ YC +EKA ++ KM ++PD SY ++ GL Q
Sbjct: 391 MRTNGCEPGVVTYNILLNHYCTIGMMEKAENLITKMETSGVNPDRYSYNQLLKGLCKTHQ 450
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA + + E G + D + N I +C K+++ A L EM KG+ +A TY
Sbjct: 451 LDKAFAFVSDHMEVGGFCDIVSCNILIDAFCKVKKVKSALELFKEMDYKGMQADAVTYGT 510
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQ-SCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ + L+ +M+ PN + L LCK + ++ A +++ M++K
Sbjct: 511 LINGLFSVGYYNLAEELFEQMLKAQIDPNVNLYNIMLHHLCKVGD-LKRAQKIFLHMIQK 569
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
I+ + L L + +EA F +M KG +P ++F+
Sbjct: 570 EILPDIVTYNTLIYWLGKNSRAMEALDLFKDMRTKGVEPDSLTFK 614
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 111/259 (42%), Gaps = 37/259 (14%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PDI + N ID CK ++ A ++VEKMR + PDV++YT+++G L +
Sbjct: 251 MDRFGFSPDIWACNIYIDCLCKQNRLHDALQMVEKMRGKGTIPDVVTYTTVVGCLCNNKR 310
Query: 61 PDKARDVLKEMKEYGCYPDAAA-----------------------------------YNA 85
+A + +EM + G PD A YNA
Sbjct: 311 FSEAVGLWEEMVKMGLKPDVVACGALIFGLCKNSKVEEAFELASRMLSLNIELSVSIYNA 370
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
I + A + A ++ M G P TYN+ + + + NL +M +G
Sbjct: 371 LISGFWRAGSIDKAYTIISFMRTNGCEPGVVTYNILLNHYCTIGMMEKAENLITKMETSG 430
Query: 146 CLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEA 204
P+ S L+K LCK + ++ A +D +E G I+ ++L D C + K+ A
Sbjct: 431 VNPDRYSYNQLLKGLCKTHQ-LDKAFAFVSDHMEVGGFCDIVSCNILIDAFCKVKKVKSA 489
Query: 205 EKSFLEMIEKGHKPSQVSF 223
+ F EM KG + V++
Sbjct: 490 LELFKEMDYKGMQADAVTY 508
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 100/235 (42%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV PD SYN L+ CK Q++KA+ V + D++S +I V +
Sbjct: 426 METSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCKVKK 485
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A ++ KEM G DA Y I A L ++M++ + PN YN+
Sbjct: 486 VKSALELFKEMDYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLKAQIDPNVNLYNI 545
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
DL+ + ++ M+ LP+ + L+ + + AL L+ DM KG
Sbjct: 546 MLHHLCKVGDLKRAQKIFLHMIQKEILPDIVTYNTLIYWLGKNSRAMEALDLFKDMRTKG 605
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANK 235
L L + L D G+ A + + M+E G + R+ ++++L NK
Sbjct: 606 VEPDSLTFKYLINGLLDEGRSTLAYEVWEYMMENGIILDREVSERLISVLKLKNK 660
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 72/188 (38%), Gaps = 4/188 (2%)
Query: 40 DISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDA 99
D S I+Y I+ L + G + L ++ G + Y + Y A +
Sbjct: 117 DHSQFAIAY--IVSLLFVDGNFALLSEFLGTVRSQGVALHRSLYRILLSGYVRAGKFDSV 174
Query: 100 SGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG-CLPNTQSCMFLVK 158
G DEMV G YN + V + Y + G CL ++
Sbjct: 175 IGTFDEMVMSGCREFGIDYNRYIGVLIKNCCFDLVEKYYGMALSKGLCLTPFTYSRWISA 234
Query: 159 LCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
LC+ ++E+ +L DM GF I ++ D LC +L +A + +M KG P
Sbjct: 235 LCQ-SNRIELVEELLADMDRFGFSPDIWACNIYIDCLCKQNRLHDALQMVEKMRGKGTIP 293
Query: 219 SQVSFRRI 226
V++ +
Sbjct: 294 DVVTYTTV 301
Score = 41.2 bits (95), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 74/191 (38%), Gaps = 8/191 (4%)
Query: 36 MRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYN----AAIRNYC 91
+R + ++ Y ++ G G+ D EM GC YN I+N C
Sbjct: 146 VRSQGVALHRSLYRILLSGYVRAGKFDSVIGTFDEMVMSGCREFGIDYNRYIGVLIKNCC 205
Query: 92 IAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQ 151
+ G+ + KGL TY+ + SN + L M G P+
Sbjct: 206 F-DLVEKYYGMA---LSKGLCLTPFTYSRWISALCQSNRIELVEELLADMDRFGFSPDIW 261
Query: 152 SCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEM 211
+C + +Q ++ ALQ+ M KG ++ + LC+ + EA + EM
Sbjct: 262 ACNIYIDCLCKQNRLHDALQMVEKMRGKGTIPDVVTYTTVVGCLCNNKRFSEAVGLWEEM 321
Query: 212 IEKGHKPSQVS 222
++ G KP V+
Sbjct: 322 VKMGLKPDVVA 332
>gi|242069919|ref|XP_002450236.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
gi|241936079|gb|EES09224.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
Length = 833
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 110/223 (49%), Gaps = 10/223 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G++ D+V +N L+ C++ +V +A +++E M + PDVISY +++ G L G+
Sbjct: 514 MLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGR 573
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A +L M G P+ YN + YC A+R+ DA L+ EM+ G +P+ TYN
Sbjct: 574 TDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNT 633
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMF-----LVKLCKRQEKVEIALQLWND 175
+ + + LY M+ + TQ M+ L LCK V+ A +++
Sbjct: 634 ILHGLFQTGRFSEAKELYLNMINS----RTQWDMYTYNIILNGLCK-NNCVDEAFKMFQS 688
Query: 176 MVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
+ KG +I+ +++ L GK +A F + G P
Sbjct: 689 LCSKGLQLHIITFNIMIGALLKGGKKEDAMDLFATISAYGLVP 731
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 112/240 (46%), Gaps = 28/240 (11%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDE---DISPDVISYTSIIGGLGL 57
M E G P++VSYN L+ +C + + E+A +++ M D+ PDV+SY ++I G
Sbjct: 257 MPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYNTVINGFFR 316
Query: 58 VGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT 117
GQ DKA ++ +M + G PD YN I C A+ + A + +M++KG+ P+ T
Sbjct: 317 EGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKPSNGT 376
Query: 118 YNLFFRVFY----W-----------SNDLRSSWNLYCRMMGTGCLPNTQSCM-------- 154
YN + W ++DL +Y ++ C C
Sbjct: 377 YNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLC--KNGRCTEARNIFDS 434
Query: 155 FLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEK 214
+ K K ++ A+ +++ M ++G ++ L D LC +G++ +A F +MI +
Sbjct: 435 VIRKGIKPDAMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAILKFNQMINE 494
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 136/284 (47%), Gaps = 27/284 (9%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQV-----------------------EKAYKIVEKMR 37
MR+ G+ P++V+Y LID CK +V EKA ++V +M
Sbjct: 456 MRQQGLSPNVVNYGALIDALCKLGRVDDAILKFNQMINEVYGLCTVEKWEKAEELVFEML 515
Query: 38 DEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLR 97
D+ I DV+ + +++ L G+ +A+ +++ M G PD +YN + +C+ R
Sbjct: 516 DQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTD 575
Query: 98 DASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV 157
+A+ L+D MV GL PN TYN + + + +++L M+ G P+ + ++
Sbjct: 576 EAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTIL 635
Query: 158 KLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHK 217
+ + A +L+ +M+ + +++ + LC + EA K F + KG +
Sbjct: 636 HGLFQTGRFSEAKELYLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQ 695
Query: 218 PSQVSFR-RIKALMELANKQEALQNLSNKMALFGPSMIPKREEY 260
++F I AL++ K++A+ +L ++ +G ++P E Y
Sbjct: 696 LHIITFNIMIGALLKGGKKEDAM-DLFATISAYG--LVPDVETY 736
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 112/253 (44%), Gaps = 41/253 (16%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
V PD +Y+ LI +C+ ++E + + + + I + ++ GL + D+A
Sbjct: 191 VAPDRCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDEAT 250
Query: 66 DVLK-EMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMV-EKGLS--PNATTYNLF 121
++L M E+GC P+ +YN ++ +C R +A L+ M ++GLS P+ +YN
Sbjct: 251 NILLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYNTV 310
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKG 180
F+ + ++NL+ +M+ G P+ + ++ LCK Q V+ A ++ M++KG
Sbjct: 311 INGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQ-VVDRAKAVFQQMLDKG 369
Query: 181 F----GSY-------------------------------ILVSDVLFDLLCDMGKLVEAE 205
G+Y + +L D LC G+ EA
Sbjct: 370 VKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEAR 429
Query: 206 KSFLEMIEKGHKP 218
F +I KG KP
Sbjct: 430 NIFDSVIRKGIKP 442
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 112/249 (44%), Gaps = 37/249 (14%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ PD+V+YN +ID CK + V++A + ++M D+ + P +Y +I G G+
Sbjct: 330 MIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKPSNGTYNCLIHGYLSTGK 389
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ +L+EM + PD Y + C R +A + D ++ KG+ P+A
Sbjct: 390 WKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEARNIFDSVIRKGIKPDAM---- 445
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCK------------------ 161
+ + ++ +M G PN + L+ LCK
Sbjct: 446 ----------IDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAILKFNQMINEV 495
Query: 162 ----RQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHK 217
EK E A +L +M+++G ++V + L LC G+++EA++ M+ G +
Sbjct: 496 YGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELMLRVGVR 555
Query: 218 PSQVSFRRI 226
P +S+ +
Sbjct: 556 PDVISYNTL 564
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 87/181 (48%), Gaps = 2/181 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +G+KP+ +YN L+ YCK R+++ AY ++ +M +PDV++Y +I+ GL G+
Sbjct: 584 MVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGR 643
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A+++ M D YN + C + +A + + KGL + T+N+
Sbjct: 644 FSEAKELYLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNI 703
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ +L+ + G +P+ ++ C+ L K E+ + L++ M E
Sbjct: 704 MIGALLKGGKKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELGV-LFSAMEEN 762
Query: 180 G 180
G
Sbjct: 763 G 763
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 104/235 (44%), Gaps = 13/235 (5%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +GV+PD++SYN L+D +C + ++A K+++ M + P+ +Y +++ G +
Sbjct: 549 MLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARR 608
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A +L+EM G PD YN + R +A L M+ + TYN+
Sbjct: 609 IDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNI 668
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+N + ++ ++ + G + + ++ + K E A+ L+ +
Sbjct: 669 ILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLKGGKKEDAMDLFATI---- 724
Query: 181 FGSYILVSDV-----LFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALM 230
+Y LV DV + + L G L E F M E G P+ R + AL+
Sbjct: 725 -SAYGLVPDVETYCLIAENLIKEGSLEELGVLFSAMEENGTAPNS---RMLNALV 775
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 91/189 (48%), Gaps = 4/189 (2%)
Query: 39 EDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRD 98
+ ++PD +Y+ +IG +G+ + V + + G + +N ++ C AKRL +
Sbjct: 189 DKVAPDRCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDE 248
Query: 99 ASG-LMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRM---MGTGCLPNTQSCM 154
A+ L+ M E G +PN +YN + F N + L M G C P+ S
Sbjct: 249 ATNILLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYN 308
Query: 155 FLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEK 214
++ R+ +V+ A L+ M+++G ++ + + D LC + A+ F +M++K
Sbjct: 309 TVINGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDK 368
Query: 215 GHKPSQVSF 223
G KPS ++
Sbjct: 369 GVKPSNGTY 377
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 68/157 (43%), Gaps = 12/157 (7%)
Query: 78 PDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWN- 136
PD Y+ I +C RL + +++ G N +N + + L + N
Sbjct: 193 PDRCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDEATNI 252
Query: 137 LYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE-KGFG------SYILVSD 189
L RM GC PN S LVK + + E AL+L + M + +G SY V +
Sbjct: 253 LLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYNTVIN 312
Query: 190 VLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
F G++ +A FL+MI++G P V++ +
Sbjct: 313 GFFR----EGQVDKAYNLFLQMIDRGIPPDVVTYNTV 345
>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 112/226 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G+ P++ +YN LI + ++E A K++ M + P +Y I G G+
Sbjct: 393 MRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGE 452
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA + ++MK G P+ A NA++ + RLR+A + + + E GL+P++ TYN+
Sbjct: 453 TGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNM 512
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + + NL M+ GC P+ L+ + +V+ A Q+++ M +
Sbjct: 513 MMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMK 572
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ + L L G++ +A + F MIEK P+ +SF +
Sbjct: 573 LSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTL 618
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 108/226 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +GV+P +YN ID + K + KA + EKM+ + I P++++ + + L +G+
Sbjct: 428 MESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGR 487
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A+ + ++E G PD+ YN ++ Y ++ +A L+ EM+ G P+ N
Sbjct: 488 LREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNS 547
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
Y + + +W ++ RM P + L+ ++ +V+ A++L+ M+EK
Sbjct: 548 LIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKK 607
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + L D C ++ A K F +M KP +++ +
Sbjct: 608 CSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTV 653
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 106/245 (43%)
Query: 2 REMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQP 61
+++G+ P + SYNCLI + EKA+ + + M++ +PD ++ ++ G G+
Sbjct: 780 KKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKI 839
Query: 62 DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
+ ++ KEM C PDA YN I + + L A ++V P TY
Sbjct: 840 TELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPL 899
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
L + L+ M GC PN L+ + E A QL+ MV +G
Sbjct: 900 IDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGI 959
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQN 241
+ +L D LC G++ EA F E+ G P +++ RI + + + E
Sbjct: 960 RPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALA 1019
Query: 242 LSNKM 246
L N+M
Sbjct: 1020 LYNEM 1024
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 76/145 (52%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G++PD+ SY L+D C +V++A +++ + PD I+Y II GLG + ++A
Sbjct: 958 GIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEA 1017
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ EM+ G PD YN+ + N +A + A + +E+ GL P+ TYN R
Sbjct: 1018 LALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRG 1077
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPN 149
+ S + ++ +Y MM GC PN
Sbjct: 1078 YSLSENPEHAYTVYKNMMVDGCNPN 1102
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 111/239 (46%), Gaps = 1/239 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M ++G++P++ ++ I V + ++++AY+I +M DE PD+++YT +I L GQ
Sbjct: 253 MEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQ 312
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A+++ +MK G PD Y + + L +M G P+ T+ +
Sbjct: 313 LENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTI 372
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
V + D ++ + M G LPN + L+ R ++E AL+L M G
Sbjct: 373 LVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVG 432
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEA 238
++ D G+ +A ++F +M KG P+ V+ + +L E+ +EA
Sbjct: 433 VQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREA 491
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 104/244 (42%), Gaps = 1/244 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G PD+V+Y LID C Q+E A ++ KM+ PD + Y +++ G
Sbjct: 288 MDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGD 347
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D ++ +M+ G PD + + C A+ +A D M ++G+ PN TYN
Sbjct: 348 LDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNT 407
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + L M G P + + + + A++ + M KG
Sbjct: 408 LICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKG 467
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEAL 239
I+ + L +MG+L EA+ F + E G P V++ +K ++ EA+
Sbjct: 468 IVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAV 527
Query: 240 QNLS 243
LS
Sbjct: 528 NLLS 531
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 109/250 (43%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ +G PD ++N L+ V+ K ++ + +++ ++M PD I+Y +I L
Sbjct: 814 MKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNN 873
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA D ++ P Y I RL +A L +EM + G PN +N+
Sbjct: 874 LDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNI 933
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ D ++ L+ RM+ G P+ +S LV +V+ AL +N++ G
Sbjct: 934 LINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTG 993
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ + + + L ++ EA + EM +G P ++ + + LA E +
Sbjct: 994 LDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAK 1053
Query: 241 NLSNKMALFG 250
+ ++ L G
Sbjct: 1054 RMYEELQLAG 1063
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 88/180 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G KP+ +N LI+ Y K E A ++ ++M +E I PD+ SYT ++ L L G+
Sbjct: 919 MSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGR 978
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A E+K G PD AYN I ++R+ +A L +EM +G+ P+ TYN
Sbjct: 979 VDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNS 1038
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + +Y + G P+ + L++ E E A ++ +M+ G
Sbjct: 1039 LMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDG 1098
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 106/233 (45%), Gaps = 11/233 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+RE G+ PD V+YN ++ Y K QV++A ++ +M PDVI S+I L G+
Sbjct: 498 LRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGR 557
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + MK+ P YN + R++ A L + M+EK SPN ++N
Sbjct: 558 VDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNT 617
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F ++++ + ++ +M C P+ + ++ ++ KV A ++ + +
Sbjct: 618 LLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKSM 677
Query: 181 FGSYILVSDVLFDLL--CDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALME 231
++ + +L L+ +G + + F+ QV FR ++ E
Sbjct: 678 HPDHVTICTLLPGLVKCGQIGDAISIARDFM---------YQVRFRVNRSFWE 721
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 99/219 (45%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+KP + +Y+ L+ K R E ++++M D + P+V ++T I LG G+ D+A
Sbjct: 222 GLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEA 281
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++ + M + GC PD Y I C A +L +A L +M G P+ Y
Sbjct: 282 YEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDK 341
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
F DL + + +M G +P+ + LV + + + A ++ M ++G
Sbjct: 342 FNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPN 401
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + L L G++ +A K M G +P+ ++
Sbjct: 402 LHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTY 440
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 69/118 (58%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
++ G+ PD ++YN +I+ K +++E+A + +MR+ I PD+ +Y S++ LGL G
Sbjct: 989 LKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGM 1048
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
++A+ + +E++ G PD YNA IR Y +++ A + M+ G +PN TY
Sbjct: 1049 VEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTY 1106
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 94/199 (47%)
Query: 25 QVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYN 84
+VE + E M+ + I D+ +Y +I L + G + VL +M++ G +A +YN
Sbjct: 137 KVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYN 196
Query: 85 AAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGT 144
I + +A + MV +GL P+ TY+ D L M
Sbjct: 197 GLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDL 256
Query: 145 GCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEA 204
G PN + +++ R K++ A +++ M ++G G ++ VL D LC+ G+L A
Sbjct: 257 GLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENA 316
Query: 205 EKSFLEMIEKGHKPSQVSF 223
++ F++M GHKP QV +
Sbjct: 317 KELFVKMKANGHKPDQVIY 335
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 110/245 (44%), Gaps = 1/245 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G + SYN LI + + +A ++ +M E + P + +Y++++ LG
Sbjct: 183 MRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRD 242
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ +LKEM++ G P+ + IR A ++ +A + M ++G P+ TY +
Sbjct: 243 SEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTV 302
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L ++ L+ +M G P+ + L+ ++ + W+ M G
Sbjct: 303 LIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADG 362
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
+ ++ +L D+LC EA +F M ++G P+ ++ I L+ ++AL
Sbjct: 363 YMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDAL 422
Query: 240 QNLSN 244
+ L
Sbjct: 423 KLLGT 427
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/288 (19%), Positives = 119/288 (41%), Gaps = 40/288 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M M KPD+++YN +I K+ +V A+ +++ + + PD ++ +++ GL GQ
Sbjct: 638 MTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLK-KSMHPDHVTICTLLPGLVKCGQ 696
Query: 61 PDKA----RDVL----------------------KEMKEYGCYPDAAAYNAA-------- 86
A RD + EM + + + N
Sbjct: 697 IGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLI 756
Query: 87 --IRNYCIAKRLRDASGLMDEMVEK-GLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMG 143
+R C KR A + D+ +K G+SP +YN + +W+L+ M
Sbjct: 757 PLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKN 816
Query: 144 TGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVE 203
GC P+ + L+ + + K+ +L+ +M+ + + +++ L L +
Sbjct: 817 VGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDK 876
Query: 204 AEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLSNKMALFG 250
A F +++ +P+ ++ I L ++ +EA++ L +M+ +G
Sbjct: 877 ALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMR-LFEEMSDYG 923
>gi|296087921|emb|CBI35204.3| unnamed protein product [Vitis vinifera]
Length = 543
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 105/216 (48%), Gaps = 1/216 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKM-RDEDISPDVISYTSIIGGLGLVG 59
M + + PD+VS+N ++D CK+ +V +A+ +V+KM + P+VISY ++I G +
Sbjct: 229 MVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQ 288
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ DKA + EM PD Y+ I C +RL+DA L EMV PN TY
Sbjct: 289 RIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYR 348
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ + L + L + G+ P+ Q + R ++E A L++++ K
Sbjct: 349 ILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSK 408
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
G + ++ + LC G L EA K F EM E G
Sbjct: 409 GLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENG 444
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 104/220 (47%), Gaps = 3/220 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+ PDI +YN LI C + + ++ +M D I PDV+S+ +++ L G+
Sbjct: 194 MVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGK 253
Query: 61 PDKARDVLKEM-KEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+A DV+ +M + GC P+ +YN I YC +R+ A L EM + L P+ TY+
Sbjct: 254 VTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYS 313
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVE 178
L+ + L+ M+ +PN + L+ LCK + E A+ L +
Sbjct: 314 TLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAE-AMALLKAIEG 372
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
I V+++ D +C G+L A F + KG +P
Sbjct: 373 SNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQP 412
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 120/251 (47%), Gaps = 7/251 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + +P++ +YN +ID CKDRQV +A+ + +M + ISPD+ +Y S+I L + +
Sbjct: 159 MVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCE 218
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEK-GLSPNATTYN 119
+L EM + PD ++N + C ++ +A ++D+M+++ G PN +YN
Sbjct: 219 WKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYN 278
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ + + L+ M +P+T + L+ E+++ A+ L+++MV
Sbjct: 279 TLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVAC 338
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKA-----LMELAN 234
++ +L D LC L EA + L+ IE + + I EL
Sbjct: 339 SQIPNLVTYRILLDYLCKNRYLAEA-MALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEA 397
Query: 235 KQEALQNLSNK 245
++ NLS+K
Sbjct: 398 ARDLFSNLSSK 408
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 116/267 (43%), Gaps = 48/267 (17%)
Query: 1 MREMGVKPDIVSYNCLIDVYCK-DR-QVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLV 58
M G+ P+I + + LI+ +C +R ++ +A + +KM E PDV++Y ++I GL V
Sbjct: 87 MDSFGIPPNIYTLHILINSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKV 146
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
G A +L M + C P+ AYN I + C +++ +A L EMV KG+SP+ TY
Sbjct: 147 GNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTY 206
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
N LC E +A L N+MV+
Sbjct: 207 NSLIHA----------------------------------LCNLCEWKHVA-TLLNEMVD 231
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGH-KPSQVSFRRIKALMELANKQE 237
++ + + D LC GK+ EA +MI++G P+ +S+ L N
Sbjct: 232 SKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYN------TLINGYC 285
Query: 238 ALQNLSNKMALFG----PSMIPKREEY 260
+Q + M LFG +IP Y
Sbjct: 286 KIQRIDKAMYLFGEMCRQELIPDTVTY 312
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 71/152 (46%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P++V+Y L+D CK+R + +A +++ + ++ PD+ I G+ G+ + ARD+
Sbjct: 342 PNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDL 401
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
+ G PD Y+ I C L +AS L EM E G + N YN R F
Sbjct: 402 FSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLR 461
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKL 159
+N+ + L M+ G + + VK+
Sbjct: 462 NNETSRAIQLLQEMVARGFSADASTMTLFVKM 493
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 97/232 (41%), Gaps = 39/232 (16%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G P+++SYN LI+ YCK ++++KA + +M +++ PD ++Y+++I GL V + A
Sbjct: 269 GCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDA 328
Query: 65 RDVLKEMK---------------EYGCY--------------------PDAAAYNAAIRN 89
+ EM +Y C PD N AI
Sbjct: 329 IALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDG 388
Query: 90 YCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPN 149
C A L A L + KGL P+ TY++ L + L+ M GC N
Sbjct: 389 MCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLN 448
Query: 150 TQSCMF--LVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMG 199
C++ + + R + A+QL +MV +GF + + +L D G
Sbjct: 449 --GCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDG 498
>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
Length = 647
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 120/249 (48%), Gaps = 5/249 (2%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
EM PD+V++ +I+ C+++++++A+ ++E+ PD ++Y I GL + D
Sbjct: 34 EMPCSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVD 93
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
A +LK+M E C P Y A + A RL +A ++++MVEKG SP TY +
Sbjct: 94 DAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVI 153
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE---- 178
+ + + ++ M+G GC P+ L+ + K++ AL N MVE
Sbjct: 154 DGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCA 213
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEA 238
+G +++ +++ LC G L +A F E+ + + +F + A + A + E
Sbjct: 214 RGVEPDVVIHNLVIRQLCASGNLEDALAYFDEL-DDSLDLTHFTFNPLVAALCKAERTEE 272
Query: 239 LQNLSNKMA 247
KM+
Sbjct: 273 AIAFVKKMS 281
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 119/251 (47%), Gaps = 2/251 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G V+YN ++D CK +V +AY M + V++Y++++ G G
Sbjct: 385 MLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGN 444
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A ++ + M + GC P+ +YN IR C A +L A ++++++ L P+ T+N
Sbjct: 445 VSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNS 504
Query: 121 FFRVFYWSND-LRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
F D + L+ M+ G PN S L+ R +E+ L+++++MV +
Sbjct: 505 FLHGLCQRLDTVGDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSR 564
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
G ++V + L LC G++ EA + F E+ E+ P S+ + + + E
Sbjct: 565 GVAPDVVVFNTLIRWLCIAGRVDEALEVFREL-ERRSAPDAWSYWSLLDALSRCERMEEA 623
Query: 240 QNLSNKMALFG 250
+ LS M L G
Sbjct: 624 RLLSFHMKLQG 634
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 106/216 (49%), Gaps = 2/216 (0%)
Query: 12 SYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEM 71
++N L+ CK + E+A V+KM + P + +YTS++ G +G+ D+A LKE
Sbjct: 256 TFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEA 315
Query: 72 KEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDL 131
E G PDA Y + I C R+ + EM +G P+A TY F + +
Sbjct: 316 VERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMI 375
Query: 132 RSSWNLYCRMMGTGCLPNTQSC-MFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDV 190
+ +Y +M+ +G + +T + + L LCK +V A + M E+G + ++
Sbjct: 376 PKAHRVYRQMLQSGTVVSTVTYNIILDGLCK-AGRVAEAYATFLAMEERGCVATVVTYSA 434
Query: 191 LFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
L D C G + A + F M+++G +P+ VS+ I
Sbjct: 435 LMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNII 470
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 114/247 (46%), Gaps = 6/247 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E P V+Y L+D K ++++A I+E+M ++ SP + +YT +I GL G+
Sbjct: 102 MDEKKCLPTTVTYTALVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGR 161
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVE----KGLSPNAT 116
++AR + +M GC PDA Y A I +L +A +++MVE +G+ P+
Sbjct: 162 VEEARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVV 221
Query: 117 TYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDM 176
+NL R S +L + + + + L + + LCK E+ E A+ M
Sbjct: 222 IHNLVIRQLCASGNLEDALAYFDELDDSLDLTHFTFNPLVAALCK-AERTEEAIAFVKKM 280
Query: 177 VEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANK 235
E+ + L D +G+L EA E +E+G P V++ I L +L
Sbjct: 281 SERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRV 340
Query: 236 QEALQNL 242
+E +
Sbjct: 341 EEGCERF 347
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 96/199 (48%), Gaps = 5/199 (2%)
Query: 49 TSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVE 108
T+++ GL GQ D+A +L EM C PD A+ I C KRL +A +++ V
Sbjct: 13 TALLNGLCKTGQLDRAMLLLDEMP---CSPDMVAFTVVINGLCREKRLDEAFSVLERAVR 69
Query: 109 KGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEI 168
G P+ TYN+F + + ++ L +M CLP T + LV + +++
Sbjct: 70 AGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDE 129
Query: 169 ALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IK 227
A+ + MVEKG + V+ D L G++ EA + F++M+ G +P + I
Sbjct: 130 AMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIS 189
Query: 228 ALMELANKQEALQNLSNKM 246
L ++ EAL L N+M
Sbjct: 190 GLAKIGKLDEALVYL-NQM 207
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 108/223 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E P + +Y L+D + K ++++A +++ + PD ++YTSII GL +G+
Sbjct: 280 MSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGR 339
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++ + EM+ G PDA Y A I + AK + A + +M++ G + TYN+
Sbjct: 340 VEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNI 399
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + ++ + M GC+ + L+ + V A++L+ M+++G
Sbjct: 400 ILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRG 459
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ +++ LC GKL +A F +++++ P +F
Sbjct: 460 CEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTF 502
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 96/200 (48%), Gaps = 3/200 (1%)
Query: 16 LIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYG 75
L++ CK Q+++A ++++M SPD++++T +I GL + D+A VL+ G
Sbjct: 15 LLNGLCKTGQLDRAMLLLDEM---PCSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAG 71
Query: 76 CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSW 135
C PD YN I C A+R+ DA L+ +M EK P TY + L +
Sbjct: 72 CEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAM 131
Query: 136 NLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLL 195
+ +M+ G P ++ ++ + +VE A +++ DM+ G V L L
Sbjct: 132 AILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGL 191
Query: 196 CDMGKLVEAEKSFLEMIEKG 215
+GKL EA +M+E G
Sbjct: 192 AKIGKLDEALVYLNQMVENG 211
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV PD+V +N LI C +V++A ++ ++ +PD SY S++ L +
Sbjct: 561 MVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERRS-APDAWSYWSLLDALSRCER 619
Query: 61 PDKARDVLKEMKEYGCYP 78
++AR + MK GC P
Sbjct: 620 MEEARLLSFHMKLQGCAP 637
>gi|255660984|gb|ACU25661.1| pentatricopeptide repeat-containing protein [Glandularia flava]
Length = 376
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 110/241 (45%), Gaps = 3/241 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G D ++Y L+ +CK+ ++K+ ++E + D +Y+++I GL
Sbjct: 85 MKKSGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVVDAFAYSAMINGLCKEAN 144
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A VL M + GC P+A YN I A + DA + EM SP TYN
Sbjct: 145 LDRAVSVLNGMIKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNT 204
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++NL ++ G P + L+K KVE ALQLWN + KG
Sbjct: 205 LINGLCKNEMFGEAYNLVKELLDKGLNPGVITYSMLMKGLCLDHKVEKALQLWNQVTSKG 264
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
F + + ++L LC +GK+ A + +M P+ VS LME K ++
Sbjct: 265 FKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHN---TLMEGFYKDGDIR 321
Query: 241 N 241
N
Sbjct: 322 N 322
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 92/181 (50%), Gaps = 3/181 (1%)
Query: 2 REMGV---KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLV 58
REMG P I++YN LI+ CK+ +AY +V+++ D+ ++P VI+Y+ ++ GL L
Sbjct: 188 REMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLNPGVITYSMLMKGLCLD 247
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
+ +KA + ++ G PD +N I C +++ A L +M +PN ++
Sbjct: 248 HKVEKALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSH 307
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
N FY D+R++ ++ R++ G P+ S +K ++ A+ +D V
Sbjct: 308 NTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGLCSCNRISDAILFLHDAVT 367
Query: 179 K 179
K
Sbjct: 368 K 368
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 93/204 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G KP+ YN LI+ + E A ++ +M SP +I+Y ++I GL
Sbjct: 155 MIKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEM 214
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A +++KE+ + G P Y+ ++ C+ ++ A L +++ KG P+ +N+
Sbjct: 215 FGEAYNLVKELLDKGLNPGVITYSMLMKGLCLDHKVEKALQLWNQVTSKGFKPDVQMHNI 274
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++ + +LY M C PN S L++ + + AL +W ++ G
Sbjct: 275 LIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNG 334
Query: 181 FGSYILVSDVLFDLLCDMGKLVEA 204
I+ ++ LC ++ +A
Sbjct: 335 LEPDIISYNITLKGLCSCNRISDA 358
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 108/245 (44%), Gaps = 1/245 (0%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E V PD V YN +++ Y + +++ +++ E M E + V S+ ++ GL + D
Sbjct: 18 ESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEG-NRSVSSFNIMMRGLFDNDKVD 76
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
+ + + MK+ G D+ Y + +C + + +++ +KG +A Y+
Sbjct: 77 EVISIWELMKKSGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVVDAFAYSAMI 136
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
+L + ++ M+ +GC PN L+ K E A++++ +M
Sbjct: 137 NGLCKEANLDRAVSVLNGMIKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTMHCS 196
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNL 242
I+ + L + LC EA E+++KG P +++ + + L +K E L
Sbjct: 197 PTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLNPGVITYSMLMKGLCLDHKVEKALQL 256
Query: 243 SNKMA 247
N++
Sbjct: 257 WNQVT 261
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 81/183 (44%), Gaps = 2/183 (1%)
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
G D A V KE+ E PDA YNA + Y +++D L + M +G + + +++
Sbjct: 4 GDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEG-NRSVSSF 62
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
N+ R + ++ + +++ M +G + ++ + LV + ++ +L + +
Sbjct: 63 NIMMRGLFDNDKVDEVISIWELMKKSGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQ 122
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP-SQVSFRRIKALMELANKQE 237
KG + + LC L A MI+ G KP + V I L+ + ++
Sbjct: 123 KGGVVDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNAHVYNTLINGLVGASKFED 182
Query: 238 ALQ 240
A++
Sbjct: 183 AIR 185
>gi|222632709|gb|EEE64841.1| hypothetical protein OsJ_19698 [Oryza sativa Japonica Group]
Length = 496
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 113/249 (45%), Gaps = 14/249 (5%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR GV+P++ +YNCLI +C+ + E+A + ++M I +V+SY ++I GL G+
Sbjct: 99 MRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGK 158
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +L M+ G P +N + Y A ++ +A ++M G P+A TYN+
Sbjct: 159 LWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNM 218
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + D+ + M G P + L+ R+ + A ++ M + G
Sbjct: 219 LIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAG 278
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQV--------------SFRRI 226
VL LC G + +A K F M EKG +PS V S++ +
Sbjct: 279 LEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKAL 338
Query: 227 KALMELANK 235
K +ME+ K
Sbjct: 339 KLIMEMRQK 347
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 108/223 (48%), Gaps = 8/223 (3%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ ++VSYN LI C+ ++ A K+++ MR E P +I++ ++ G G G+ A
Sbjct: 138 GIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNA 197
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+MK G P A YN I +C A+ + A+ + +M E+GL P TY +
Sbjct: 198 LPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDS 257
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
F N + ++ + M G + + LV+ + ++ A +L+ M EKG
Sbjct: 258 FARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKG---- 313
Query: 185 ILVSDVLFDLLC----DMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ S+V++D++ G +A K +EM +KG P+ S+
Sbjct: 314 VEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASY 356
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
D+ + L++ CK V +A ++ ++M ++P+ ++YT+++ G GQ +K +
Sbjct: 37 DVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALF 96
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
+EM+ G P+ YN I +C A L DEM +G+ N +YN
Sbjct: 97 EEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRH 156
Query: 129 NDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVS 188
L + L M G P+ + LV + K+ AL +N M GF +
Sbjct: 157 GKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTY 216
Query: 189 DVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++L C + A ++ +M E+G +P++V++
Sbjct: 217 NMLIAGFCRARDMTRANRALSDMKERGLEPTKVTY 251
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 84/176 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G +P V+YN LI +C+ R + +A + + M++ + P ++YT +I
Sbjct: 204 MKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENH 263
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA ++L M++ G DA Y +R C+ ++DA L M EKG+ P+ Y++
Sbjct: 264 MGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDM 323
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDM 176
+ + L M G +PN+ S +++ + +K + A L +DM
Sbjct: 324 MIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALLDDM 379
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 89/209 (42%), Gaps = 1/209 (0%)
Query: 21 CKDRQVEKAYKIVEK-MRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPD 79
C V A ++ + + D + DV + T+++ G G +AR V EM G P+
Sbjct: 13 CAAGDVRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPN 72
Query: 80 AAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYC 139
Y A + Y + L +EM G+ PN TYN + + + + +L+
Sbjct: 73 EVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFD 132
Query: 140 RMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMG 199
M G + N S L+ R K+ A +L + M +G I+ ++L D G
Sbjct: 133 EMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAG 192
Query: 200 KLVEAEKSFLEMIEKGHKPSQVSFRRIKA 228
K+ A F +M G +PS V++ + A
Sbjct: 193 KMSNALPFFNQMKAAGFQPSAVTYNMLIA 221
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 74/178 (41%), Gaps = 2/178 (1%)
Query: 79 DAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLY 138
D A A + C + +A + DEM GL+PN TY ++ + L+
Sbjct: 37 DVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALF 96
Query: 139 CRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDM 198
M G PN + L+ R + E A L+++M +G ++ + L LC
Sbjct: 97 EEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRH 156
Query: 199 GKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKM--ALFGPSMI 254
GKL +A K M +G +PS ++F + A K N+M A F PS +
Sbjct: 157 GKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAV 214
>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
Length = 734
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 115/248 (46%), Gaps = 2/248 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G++PD+V Y LID CK + +KA+ +++ M + P+V++Y +I + G
Sbjct: 211 MSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGS 270
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKG--LSPNATTY 118
+A VLK+M E G PD YN I+ + +A L++EMV + PN T+
Sbjct: 271 VKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTF 330
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
N + +R ++ + M TGC+ N + L+ R KV A++L ++M
Sbjct: 331 NSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTS 390
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEA 238
G +L C M ++ AE M ++G +P + + M E
Sbjct: 391 LGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMER 450
Query: 239 LQNLSNKM 246
+NL N+M
Sbjct: 451 ARNLFNEM 458
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 126/256 (49%), Gaps = 10/256 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR GV+ D+V+Y LI C +V+KA +++ +M + I P+V+ Y+S++ G G+
Sbjct: 141 MRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGR 200
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ V EM E G PD Y I + C + + A G+MD MV +GL PN TYN+
Sbjct: 201 WEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNV 260
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++ + + +M G P+ + L+K +++ A+ L +MV
Sbjct: 261 LINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVR-- 318
Query: 181 FGSYILVSDV-----LFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELAN 234
G I+ +V + LCD+G++ +A + M E G + V++ I L+ +
Sbjct: 319 -GKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHK 377
Query: 235 KQEALQNLSNKMALFG 250
++A++ L ++M G
Sbjct: 378 VRKAME-LMDEMTSLG 392
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 114/237 (48%), Gaps = 3/237 (1%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
+P+ VSY L+ C DR ++A ++ MR + DV++Y ++I GL + DKA +
Sbjct: 112 RPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVE 171
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
++ EM E G P+ Y++ ++ YC + R D + EM EKG+ P+ Y
Sbjct: 172 LMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLC 231
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+ + + M+ G PN + L+ ++ V+ A+ + M EKG ++
Sbjct: 232 KVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVV 291
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGH--KPSQVSFRR-IKALMELANKQEALQ 240
+ L L D+ ++ EA EM+ + KP+ V+F I+ L ++ ++A Q
Sbjct: 292 TYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQ 348
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 127/289 (43%), Gaps = 52/289 (17%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G ++V+YN LI + +V KA +++++M + PD +Y+ +I G + Q
Sbjct: 353 MEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQ 412
Query: 61 PDKARDVLKEMKEYGCYP----------------------------------DAAAYNAA 86
D+A D+L M++ G P D AY+
Sbjct: 413 VDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDNNFPLDVVAYSTM 472
Query: 87 IRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGC 146
I C A L+ A L+ +V++GL+P+A TY++ +F S D+ ++ + +M +G
Sbjct: 473 IHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGF 532
Query: 147 LPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG--SYILVSDVLFDLLCDMGK-LVE 203
LP+ L++ + ++ L+L +M+ K S I+ + + + GK L++
Sbjct: 533 LPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDSKIISTLSTSLVASNEGKALLQ 592
Query: 204 AEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFGPS 252
+ F I KG+ + + QE ++ L N ++ PS
Sbjct: 593 SLPDFSAEISKGN---------------INSPQELMKVLHNAISFKAPS 626
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 96/218 (44%), Gaps = 1/218 (0%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
VKP++V++N +I C ++ +A+++ M + ++++Y +IGGL V + KA
Sbjct: 323 VKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAM 382
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+++ EM G PD+ Y+ I+ +C ++ A L+ M ++G+ P Y
Sbjct: 383 ELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAM 442
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ + NL+ M L + CK + ++ A +L +V++G
Sbjct: 443 CEQGMMERARNLFNEMDNNFPLDVVAYSTMIHGACKAGD-LKTAKELLKSIVDEGLTPDA 501
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ ++ ++ G + A +M G P F
Sbjct: 502 VTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVF 539
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 90/218 (41%), Gaps = 38/218 (17%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDED---ISPDVISYTSIIGGLGLVGQPDKAR 65
D VSYN ++ C+ ++A ++ M E P+ +SYT ++ L D+A
Sbjct: 76 DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAV 135
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+L+ M+ G D Y IR C A + A LM EM E G+ PN Y+ +
Sbjct: 136 GLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQG- 194
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
YC+ R E V +++ +M EKG +
Sbjct: 195 ------------YCK-------------------SGRWEDVG---KVFVEMSEKGIEPDV 220
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ L D LC +GK +A M+ +G +P+ V++
Sbjct: 221 VMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTY 258
>gi|255574927|ref|XP_002528370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532238|gb|EEF34042.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 712
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 107/222 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E G+ P+ +Y CLID +CK +AY++++ M E +P++ +Y +II GL G+
Sbjct: 395 MKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGR 454
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A +L+ + G + D Y I +C + A + M + GL P+ TYN+
Sbjct: 455 FPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNV 514
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + S L+ +G G LP ++ ++ R + A++ ++ M + G
Sbjct: 515 LIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYG 574
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
+ L LC+ KL EA + + MI+ G P +V+
Sbjct: 575 CKPDSITYGALISGLCNESKLDEACQLYETMIDNGLSPCEVT 616
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 108/223 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+R KP++ +Y C+I+ YCK+ ++ +A ++ +M+++ + P+ +YT +I G G
Sbjct: 360 VRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGN 419
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A +++ M + G P+ YNA I C R +A L+ ++ GL + TY +
Sbjct: 420 FGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTI 479
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F D + + ++ RM G P+ + L+ RQ+KVE + +L+ + V G
Sbjct: 480 LISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQKKVEESEKLFEEAVGLG 539
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ C G + A K F +M + G KP +++
Sbjct: 540 LLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDSITY 582
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 122/262 (46%), Gaps = 5/262 (1%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
+MG+ P++++++ LI+ CK +++A++++E+M + P+V ++T++I GL G +
Sbjct: 291 QMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGLCKKGWTE 350
Query: 63 KA-RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLF 121
KA R LK ++ P+ Y I YC ++L A L+ M E+GL PN TY
Sbjct: 351 KAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCL 410
Query: 122 FRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKG 180
+ + ++ L M G PN + ++ LCK+ E A +L ++ G
Sbjct: 411 IDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPE-AYKLLRRGLKSG 469
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ + +L C +A F M + G +P ++ + A K E +
Sbjct: 470 LHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQKKVEESE 529
Query: 241 NLSNKMALFGPSMIPKREEYLA 262
L + G ++P +E Y +
Sbjct: 530 KLFEEAV--GLGLLPTKETYTS 549
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 116/296 (39%), Gaps = 38/296 (12%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + V PD SY ++ YC+ ++ + ++ M + + D + T +I G
Sbjct: 219 MLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEKGF 278
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A K+ + G P+ +++ I C ++ A +++EMV KG PN T+
Sbjct: 279 VNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTA 338
Query: 121 F-------------FRVF--------YWSNDLRSS--WNLYC-------------RMMGT 144
FR+F Y N + N YC RM
Sbjct: 339 LIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQ 398
Query: 145 GCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEA 204
G +PNT + L+ + A +L + M ++GF I + + D LC G+ EA
Sbjct: 399 GLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEA 458
Query: 205 EKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFGPSMIPKREEY 260
K ++ G +V++ + + E + + Q L+ +F + P Y
Sbjct: 459 YKLLRRGLKSGLHADKVTYTIL--ISEFCRQTDNKQALAIFSRMFKVGLQPDMHTY 512
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 96/211 (45%), Gaps = 3/211 (1%)
Query: 15 CLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEY 74
C++ + + ++++A +V +M++ + +I +G D A V EM +
Sbjct: 163 CMVRSFSEIGKLKEAVNMVIEMQNHGLVLKARILNFVIDVALALGFVDYAEKVFDEMLDR 222
Query: 75 GCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSS 134
PD+ +Y + YC R+ D + +M+E+G + + T L F + +
Sbjct: 223 AVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEKGFVNRA 282
Query: 135 WNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFD 193
+ + + + G PN + L+ LCK ++ A ++ +MV KG+ + L D
Sbjct: 283 FWYFKKWVQMGLNPNLINFSSLINGLCKIGS-IKQAFEMLEEMVRKGWKPNVYTHTALID 341
Query: 194 LLCDMGKLVEAEKSFLEMIEK-GHKPSQVSF 223
LC G +A + FL+++ +KP+ ++
Sbjct: 342 GLCKKGWTEKAFRLFLKLVRSDNYKPNVYTY 372
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 64/158 (40%), Gaps = 32/158 (20%)
Query: 4 MGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDK 63
+G+ P +Y +I YC+D + A K KMRD PD I+Y ++I GL + D+
Sbjct: 538 LGLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDSITYGALISGLCNESKLDE 597
Query: 64 ARDVLKEMKEYGCYP----------------DAA----------------AYNAAIRNYC 91
A + + M + G P D+A N IR C
Sbjct: 598 ACQLYETMIDNGLSPCEVTRVTLAYEYCKQGDSATAMIILERLEKKLWIRTVNTLIRKLC 657
Query: 92 IAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSN 129
K++ A+ ++++K L+ + T F Y SN
Sbjct: 658 SEKKVGVAALFFHKLLDKDLNVDRITLAAFTTACYESN 695
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 98/244 (40%), Gaps = 16/244 (6%)
Query: 14 NCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKE 73
N +IDV V+ A K+ ++M D + PD SY ++ G +G+ LK+M E
Sbjct: 197 NFVIDVALALGFVDYAEKVFDEMLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIE 256
Query: 74 YGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRS 133
G D A I + + A + V+ GL+PN ++ ++
Sbjct: 257 RGYAVDNATCTLMISTFSEKGFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQ 316
Query: 134 SWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK-GFGSYILVSDVL 191
++ + M+ G PN + L+ LCK+ E A +L+ +V + + +
Sbjct: 317 AFEMLEEMVRKGWKPNVYTHTALIDGLCKKGW-TEKAFRLFLKLVRSDNYKPNVYTYTCM 375
Query: 192 FDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS-------------FRRIKALMELANKQEA 238
+ C KL AE + M E+G P+ + F R LM+L K+
Sbjct: 376 INGYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGF 435
Query: 239 LQNL 242
N+
Sbjct: 436 TPNI 439
>gi|218197339|gb|EEC79766.1| hypothetical protein OsI_21159 [Oryza sativa Indica Group]
Length = 410
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 113/249 (45%), Gaps = 14/249 (5%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR GV+P++ +YNCLI +C+ + E+A + ++M I +V+SY ++I GL G+
Sbjct: 99 MRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGK 158
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +L M+ G P +N + Y A ++ +A ++M G P+A TYN+
Sbjct: 159 LWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNM 218
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + D+ + M G P + L+ R+ + A ++ M + G
Sbjct: 219 LIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAG 278
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQV--------------SFRRI 226
VL LC G + +A K F M EKG +PS V S++ +
Sbjct: 279 LEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKAL 338
Query: 227 KALMELANK 235
K +ME+ K
Sbjct: 339 KLIMEMRQK 347
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ ++VSYN LI C+ ++ A K+++ MR E P +I++ ++ G G G+ A
Sbjct: 138 GIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNA 197
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+MK G P A YN I +C A+ + A+ + +M E+GL P TY +
Sbjct: 198 LPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDS 257
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
F N + ++ + M G + + LV+ + ++ A +L+ M EKG
Sbjct: 258 FARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPS 317
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ D++ G +A K +EM +KG P+ S+
Sbjct: 318 NVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASY 356
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 90/193 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G +P V+YN LI +C+ R + +A + + M++ + P ++YT +I
Sbjct: 204 MKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENH 263
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA ++L M++ G DA Y +R C+ ++DA L M EKG+ P+ Y++
Sbjct: 264 MGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDM 323
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + L M G +PN+ S +++ + +K + A L +DMV G
Sbjct: 324 MIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALLDDMVRAG 383
Query: 181 FGSYILVSDVLFD 193
+ + L D
Sbjct: 384 LQTSESICQALLD 396
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
D+ + L++ CK V +A ++ ++M ++P+ ++YT+++ G GQ +K +
Sbjct: 37 DVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALF 96
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
+EM+ G P+ YN I +C A L DEM +G+ N +YN
Sbjct: 97 EEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRH 156
Query: 129 NDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVS 188
L + L M G P+ + LV + K+ AL +N M GF +
Sbjct: 157 GKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTY 216
Query: 189 DVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++L C + A ++ +M E+G +P++V++
Sbjct: 217 NMLIAGFCRARDMTRANRALSDMKERGLEPTKVTY 251
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 89/209 (42%), Gaps = 1/209 (0%)
Query: 21 CKDRQVEKAYKIVEK-MRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPD 79
C V A ++ + + D + DV + T+++ G G +AR V EM G P+
Sbjct: 13 CAAGDVRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPN 72
Query: 80 AAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYC 139
Y A + Y + L +EM G+ PN TYN + + + + +L+
Sbjct: 73 EVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFD 132
Query: 140 RMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMG 199
M G + N S L+ R K+ A +L + M +G I+ ++L D G
Sbjct: 133 EMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAG 192
Query: 200 KLVEAEKSFLEMIEKGHKPSQVSFRRIKA 228
K+ A F +M G +PS V++ + A
Sbjct: 193 KMSNALPFFNQMKAAGFQPSAVTYNMLIA 221
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 74/178 (41%), Gaps = 2/178 (1%)
Query: 79 DAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLY 138
D A A + C + +A + DEM GL+PN TY ++ + L+
Sbjct: 37 DVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALF 96
Query: 139 CRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDM 198
M G PN + L+ R + E A L+++M +G ++ + L LC
Sbjct: 97 EEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRH 156
Query: 199 GKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKM--ALFGPSMI 254
GKL +A K M +G +PS ++F + A K N+M A F PS +
Sbjct: 157 GKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAV 214
>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 115/230 (50%), Gaps = 8/230 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+R+ G++P VS+N LI+ CK R +++ +++ + M + I PDV +Y+ +I GL G+
Sbjct: 249 IRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGR 308
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A + EM++ G P+ + A I ++R+ A +M+ G+ P+ YN
Sbjct: 309 LDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNT 368
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
D+ + L M G P+ + L+ ++ +E A+++ M E+G
Sbjct: 369 LLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEG 428
Query: 181 FGSYILVSDVLFDLL----CDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+++ +V F L C G++ +AE++ EM+E G KP ++ +
Sbjct: 429 ----VVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMV 474
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 100/200 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M MGVKPD+V YN L++ CK V KA K+V++M+ + PD I+YT++I G G
Sbjct: 354 MLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGD 413
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A ++ K M E G D A+ A I +C R+RDA + EMVE G+ P+ TY +
Sbjct: 414 LESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTM 473
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ +++ + L M G P + L+ +Q +++ A L M+ G
Sbjct: 474 VIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLG 533
Query: 181 FGSYILVSDVLFDLLCDMGK 200
+ ++L + C GK
Sbjct: 534 VTPDDITYNILLEGHCKNGK 553
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 110/248 (44%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G++P+ +++ LID + R+++ A +M + PD++ Y +++ GL VG
Sbjct: 319 MQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGD 378
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KAR ++ EMK G PD Y I YC L A + M E+G+ + +
Sbjct: 379 VNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTA 438
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F +R + M+ G P+ + ++ ++ V++ +L +M G
Sbjct: 439 LISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQING 498
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
++ +VL + LC G++ A M+ G P +++ + K E L
Sbjct: 499 HKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLL 558
Query: 241 NLSNKMAL 248
L N+ L
Sbjct: 559 KLRNEKGL 566
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 107/241 (44%), Gaps = 3/241 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E + PD+ +Y+ LI CK+ +++ A ++ ++M+ + P+ I++T++I G +
Sbjct: 284 MEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRR 343
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A + +M G PD YN + C + A L+DEM G+ P+ TY
Sbjct: 344 MDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTT 403
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ DL S+ + M G + + + L+ R +V A + +MVE G
Sbjct: 404 LIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAG 463
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
++ D C G + K EM GHKP +++ LM KQ ++
Sbjct: 464 MKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITY---NVLMNGLCKQGQMK 520
Query: 241 N 241
N
Sbjct: 521 N 521
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 88/192 (45%), Gaps = 4/192 (2%)
Query: 70 EMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSN 129
E+ EYG P YN I +C +RDA + +E+ ++GL P ++N S
Sbjct: 213 EILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSR 272
Query: 130 DLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSD 189
+L + L M P+ + L+ ++ ++++A QL+++M ++G +
Sbjct: 273 NLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFT 332
Query: 190 VLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLSNKMAL 248
L D ++ A ++ +M+ G KP V + + L ++ + +A + L ++M +
Sbjct: 333 ALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKA-RKLVDEMKM 391
Query: 249 FGPSMIPKREEY 260
G M P + Y
Sbjct: 392 VG--MKPDKITY 401
>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Cucumis sativus]
Length = 857
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 114/254 (44%), Gaps = 36/254 (14%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PDI ++N LID YCK R ++KA +I++ M I+PDVI+Y +++ GL + D
Sbjct: 456 GCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNV 515
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATT------- 117
D K M E GC P+ YN I ++C +++ +A L EM +GL+P+ T
Sbjct: 516 VDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICG 575
Query: 118 ----------YNLFFRV-----FYWSN--------------DLRSSWNLYCRMMGTGCLP 148
Y LF + F +S ++ + L+ +M G+ C P
Sbjct: 576 LCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAP 635
Query: 149 NTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSF 208
+ + ++ + +++A + + KG + + LC +L EA
Sbjct: 636 DNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVII 695
Query: 209 LEMIEKGHKPSQVS 222
M++ G P +V+
Sbjct: 696 NLMVQNGIVPEEVN 709
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 113/221 (51%), Gaps = 2/221 (0%)
Query: 7 KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARD 66
+P + SYN ++++ + +A+K+ +M+D I PDV ++T + + G+P A
Sbjct: 108 EPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALR 167
Query: 67 VLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFY 126
+L M GC +A +Y A I + +A L DEM+++G+ P+ T+N V
Sbjct: 168 LLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLC 227
Query: 127 WSNDLRSSWNLYCRMMGTGCLPNTQSC-MFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+++ S L+ ++M G PN + +F+ LC R+ ++ A +L +V +G +
Sbjct: 228 KKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLC-RKGAIDEAARLLESIVSEGLTPDV 286
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + L C KLVEAE +M+ G +P++ ++ I
Sbjct: 287 ISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTI 327
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 106/217 (48%), Gaps = 1/217 (0%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E G K I+ YN L+ K V +A ++++ M + SPD+ +Y ++ GL +G
Sbjct: 384 EKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLS 443
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
A +L + GC PD +N I YC + + A ++D M+ G++P+ TYN
Sbjct: 444 DANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLL 503
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
+ L + + + M+ GC PN + L++ + KV A++L+ +M +G
Sbjct: 504 NGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLT 563
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
I+ L LC G+L +A + F+ IEK +K S
Sbjct: 564 PDIVTLCTLICGLCSNGELDKAYELFV-TIEKEYKFS 599
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 109/218 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+ PDI+++N LI V CK V+++ K+ K+ + P++ ++ I GL G
Sbjct: 207 MLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGA 266
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A +L+ + G PD +YN I +C +L +A + +MV G+ PN TYN
Sbjct: 267 IDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNT 326
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + ++++ + M G +P+ + L+ + A+ ++ + +EKG
Sbjct: 327 IINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKG 386
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
F I++ + L L G +++A + +M+E G P
Sbjct: 387 FKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSP 424
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 108/220 (49%), Gaps = 2/220 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PD +Y+ LI+ C D + +A + + ++ +I Y +++ GL G +A
Sbjct: 351 GFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQA 410
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++K+M E+GC PD YN + C L DA+G++++ + KG P+ T+N
Sbjct: 411 LQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDG 470
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGS 183
+ ++ + + M+ G P+ + L+ LCK + K++ + + M+EKG
Sbjct: 471 YCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKAR-KLDNVVDTFKAMLEKGCTP 529
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
I+ ++L + C K+ EA + F EM +G P V+
Sbjct: 530 NIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTL 569
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 111/242 (45%), Gaps = 10/242 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV+P+ +YN +I+ +CK ++ A KI+ + PD +Y+S+I GL G
Sbjct: 312 MVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGD 371
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A V E E G YN ++ + A LM +M+E G SP+ TYNL
Sbjct: 372 MNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNL 431
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
L + + + GC+P+ + L+ +Q ++ A+++ + M+ G
Sbjct: 432 VVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHG 491
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF----------RRIKALM 230
++ + L + LC KL +F M+EKG P+ +++ R++ M
Sbjct: 492 ITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAM 551
Query: 231 EL 232
EL
Sbjct: 552 EL 553
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 102/226 (45%), Gaps = 3/226 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G PDI +YN +++ CK + A I+ + PD+ ++ ++I G
Sbjct: 417 MMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRN 476
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
DKA ++L M +G PD YN + C A++L + M+EKG +PN TYN+
Sbjct: 477 MDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNI 536
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDM-VE 178
F + + L+ M G P+ + C + LC E ++ A +L+ + E
Sbjct: 537 LIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGE-LDKAYELFVTIEKE 595
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
F + +++ + C+ + AEK F +M P ++R
Sbjct: 596 YKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYR 641
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/227 (20%), Positives = 101/227 (44%), Gaps = 2/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+++G+ PD+ ++ + +C + A +++ M + + +SY ++I G
Sbjct: 137 MKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENC 196
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A + EM + G PD +N I C ++++ L +++++G+ PN T+N+
Sbjct: 197 QIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNI 256
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEK 179
F + + + L ++ G P+ S L+ CK + VE L + MV
Sbjct: 257 FIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYL-HKMVNS 315
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G + + + C G + A+K + + KG P + ++ +
Sbjct: 316 GVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSL 362
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 95/232 (40%), Gaps = 37/232 (15%)
Query: 29 AYKIVEKMRDED-ISPDVISYTSIIGGLGLVGQPDKARDVLKEM-KEYGCYPDAAAYNAA 86
A K+ +++ ED + +Y +I LGL G+ + DVL EM K Y
Sbjct: 23 ALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKNVDSKMLEGVYIGI 82
Query: 87 IRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGC 146
+R+Y ++++A + + M P+ +YN + + +Y RM G
Sbjct: 83 MRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGI 142
Query: 147 LPNT----------------------------QSCMF-LVKLCK-----RQEKVEI-ALQ 171
P+ Q C F V C +E +I A
Sbjct: 143 YPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYH 202
Query: 172 LWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
L+++M+++G IL + L +LC G + E+EK F +++++G P+ +F
Sbjct: 203 LFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTF 254
>gi|125549949|gb|EAY95771.1| hypothetical protein OsI_17645 [Oryza sativa Indica Group]
Length = 240
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 106/218 (48%), Gaps = 3/218 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV D+ SY+ +D K + KA+K+ ++M+ + ++ DV++Y + I +GL
Sbjct: 1 MDSRGVAKDLHSYSIYMDALAKSGKPWKAFKVFKEMKQKGMAIDVVAYNTAIHSVGLAQG 60
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A + ++M + GC P+A+ +N ++ C R ++ + +M + G+ PN TY+
Sbjct: 61 VDFAIRLYRQMVDAGCKPNASTFNTIVKLLCKEGRFKEGYAFVQQMHKFGIEPNVLTYHC 120
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
FF+ ++ L+ +M+ GC P + + L+K R + +W M E+G
Sbjct: 121 FFQYLSRPQEVL---GLFEKMLERGCWPRMDTYVMLIKRFGRWGFLRPVFIVWKAMEEQG 177
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKP 218
+ L D L G + A K EM+ KG P
Sbjct: 178 LSPDAFAYNSLIDALLQKGMVDLARKYDEEMLSKGLSP 215
>gi|255660954|gb|ACU25646.1| pentatricopeptide repeat-containing protein [Verbena perennis]
Length = 375
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 109/241 (45%), Gaps = 3/241 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E G D ++Y L+ +CK+ ++K+ ++E + D +Y+++I GL
Sbjct: 85 MKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEAN 144
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A VL M + GC P+ YN I A + DA + EM SP TYN
Sbjct: 145 LDRALYVLNGMIKSGCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNT 204
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++NL ++ G P + L+K KVE ALQLWN + KG
Sbjct: 205 LINGLCKKEMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHKVERALQLWNQVTSKG 264
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
F + + ++L LC +GK+ A + +M + P+ VS LME K ++
Sbjct: 265 FKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKYAPNLVSHN---TLMEGFYKDGDIR 321
Query: 241 N 241
N
Sbjct: 322 N 322
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 90/181 (49%), Gaps = 3/181 (1%)
Query: 2 REMGV---KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLV 58
REMG P I++YN LI+ CK +AY +V+++ D+ + P VI+Y+ ++ GL L
Sbjct: 188 REMGTMHCSPTIITYNTLINGLCKKEMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLD 247
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
+ ++A + ++ G PD +N I C +++ A L +M +PN ++
Sbjct: 248 HKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKYAPNLVSH 307
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
N FY D+R++ ++ R++ G P+ S +K ++ A+ +D V
Sbjct: 308 NTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGLCSCNRISDAILFLHDAVT 367
Query: 179 K 179
K
Sbjct: 368 K 368
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 93/204 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G KP++ YN LI+ + E A ++ +M SP +I+Y ++I GL
Sbjct: 155 MIKSGCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKKEM 214
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A +++KE+ + G P Y+ ++ C+ ++ A L +++ KG P+ +N+
Sbjct: 215 FGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQMHNI 274
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++ + +LY M PN S L++ + + AL +W ++ G
Sbjct: 275 LIHGLCSVGKMQLALSLYFDMNRWKYAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNG 334
Query: 181 FGSYILVSDVLFDLLCDMGKLVEA 204
I+ ++ LC ++ +A
Sbjct: 335 LEPDIISYNITLKGLCSCNRISDA 358
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 108/245 (44%), Gaps = 1/245 (0%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E V PD V YN +++ Y + +++ +++ E M E + V S+ ++ GL G+ D
Sbjct: 18 ESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEG-NRSVSSFNIMMRGLFDNGKVD 76
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
+ + + MKE G D+ Y + +C + + +++ +KG +A Y+
Sbjct: 77 EVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMI 136
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
+L + + M+ +GC PN L+ K E A++++ +M
Sbjct: 137 NGLCKEANLDRALYVLNGMIKSGCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTMHCS 196
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNL 242
I+ + L + LC EA E+++KG P +++ + + L +K E L
Sbjct: 197 PTIITYNTLINGLCKKEMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHKVERALQL 256
Query: 243 SNKMA 247
N++
Sbjct: 257 WNQVT 261
Score = 40.4 bits (93), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 80/183 (43%), Gaps = 2/183 (1%)
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
G D A V KE+ E PDA YNA + Y +++D L + M +G + + +++
Sbjct: 4 GDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEG-NRSVSSF 62
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
N+ R + + + +++ M +G + ++ + LV + ++ +L + +
Sbjct: 63 NIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQ 122
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS-QVSFRRIKALMELANKQE 237
KG + + LC L A MI+ G KP+ V I L+ + ++
Sbjct: 123 KGGVLDAFAYSAMINGLCKEANLDRALYVLNGMIKSGCKPNVHVYNTLINGLVGASKFED 182
Query: 238 ALQ 240
A++
Sbjct: 183 AIR 185
Score = 37.0 bits (84), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 66/155 (42%), Gaps = 4/155 (2%)
Query: 91 CIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNT 150
C + + A + E+VE +SP+A YN ++ ++ + L+ MMG+ +
Sbjct: 1 CESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELW-EMMGSEGNRSV 59
Query: 151 QSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLE 210
S +++ KV+ + +W M E GF + +L C G ++ LE
Sbjct: 60 SSFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNG-YIDKSLHVLE 118
Query: 211 MIE-KGHKPSQVSFRR-IKALMELANKQEALQNLS 243
M E KG ++ I L + AN AL L+
Sbjct: 119 MAEQKGGVLDAFAYSAMINGLCKEANLDRALYVLN 153
>gi|297724361|ref|NP_001174544.1| Os05g0583900 [Oryza sativa Japonica Group]
gi|42491383|gb|AAS16889.1| hypothetical protein [Oryza sativa Japonica Group]
gi|255676609|dbj|BAH93272.1| Os05g0583900 [Oryza sativa Japonica Group]
Length = 467
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 113/249 (45%), Gaps = 14/249 (5%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR GV+P++ +YNCLI +C+ + E+A + ++M I +V+SY ++I GL G+
Sbjct: 99 MRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGK 158
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +L M+ G P +N + Y A ++ +A ++M G P+A TYN+
Sbjct: 159 LWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNM 218
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + D+ + M G P + L+ R+ + A ++ M + G
Sbjct: 219 LIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAG 278
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQV--------------SFRRI 226
VL LC G + +A K F M EKG +PS V S++ +
Sbjct: 279 LEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKAL 338
Query: 227 KALMELANK 235
K +ME+ K
Sbjct: 339 KLIMEMRQK 347
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ ++VSYN LI C+ ++ A K+++ MR E P +I++ ++ G G G+ A
Sbjct: 138 GIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNA 197
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+MK G P A YN I +C A+ + A+ + +M E+GL P TY +
Sbjct: 198 LPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDS 257
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
F N + ++ + M G + + LV+ + ++ A +L+ M EKG
Sbjct: 258 FARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPS 317
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ D++ G +A K +EM +KG P+ S+
Sbjct: 318 NVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASY 356
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%)
Query: 9 DIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVL 68
D+ + L++ CK V +A ++ ++M ++P+ ++YT+++ G GQ +K +
Sbjct: 37 DVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALF 96
Query: 69 KEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWS 128
+EM+ G P+ YN I +C A L DEM +G+ N +YN
Sbjct: 97 EEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRH 156
Query: 129 NDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVS 188
L + L M G P+ + LV + K+ AL +N M GF +
Sbjct: 157 GKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTY 216
Query: 189 DVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++L C + A ++ +M E+G +P++V++
Sbjct: 217 NMLIAGFCRARDMTRANRALSDMKERGLEPTKVTY 251
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 84/176 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G +P V+YN LI +C+ R + +A + + M++ + P ++YT +I
Sbjct: 204 MKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENH 263
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA ++L M++ G DA Y +R C+ ++DA L M EKG+ P+ Y++
Sbjct: 264 MGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDM 323
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDM 176
+ + L M G +PN+ S +++ + +K + A L +DM
Sbjct: 324 MIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALLDDM 379
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 89/209 (42%), Gaps = 1/209 (0%)
Query: 21 CKDRQVEKAYKIVEK-MRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPD 79
C V A ++ + + D + DV + T+++ G G +AR V EM G P+
Sbjct: 13 CAAGDVRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPN 72
Query: 80 AAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYC 139
Y A + Y + L +EM G+ PN TYN + + + + +L+
Sbjct: 73 EVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFD 132
Query: 140 RMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMG 199
M G + N S L+ R K+ A +L + M +G I+ ++L D G
Sbjct: 133 EMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAG 192
Query: 200 KLVEAEKSFLEMIEKGHKPSQVSFRRIKA 228
K+ A F +M G +PS V++ + A
Sbjct: 193 KMSNALPFFNQMKAAGFQPSAVTYNMLIA 221
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 74/178 (41%), Gaps = 2/178 (1%)
Query: 79 DAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLY 138
D A A + C + +A + DEM GL+PN TY ++ + L+
Sbjct: 37 DVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALF 96
Query: 139 CRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDM 198
M G PN + L+ R + E A L+++M +G ++ + L LC
Sbjct: 97 EEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRH 156
Query: 199 GKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKM--ALFGPSMI 254
GKL +A K M +G +PS ++F + A K N+M A F PS +
Sbjct: 157 GKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAV 214
>gi|242074832|ref|XP_002447352.1| hypothetical protein SORBIDRAFT_06g033480 [Sorghum bicolor]
gi|241938535|gb|EES11680.1| hypothetical protein SORBIDRAFT_06g033480 [Sorghum bicolor]
Length = 888
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 121/251 (48%), Gaps = 2/251 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G++PD YN L++ +CK +++A +I E+M+ E + P ++ II G + G
Sbjct: 489 MIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMKKERMQPSNRTFRPIIEGFAVAGD 548
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A D L M+ GC P YNA I ++ A ++D+M G++PN TY +
Sbjct: 549 MKRALDTLDLMRRSGCAPTVMTYNALIHGLIRKHQVERAVSVLDKMSIAGIAPNEHTYTI 608
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
R + S D+ ++ + ++ +G + L++ C + +++ AL + +M +
Sbjct: 609 IMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQK 668
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
+ ++L D G + EA +M E G P+ +F I A + + Q A
Sbjct: 669 IPRNTFIYNILIDGWARRGDVWEAADLMKQMKEDGIPPNIHTFTSYINACCKAGDMQRA- 727
Query: 240 QNLSNKMALFG 250
+N+ +MA G
Sbjct: 728 ENVIQEMADVG 738
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 100/217 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
++E G +P I+SY CLI++Y K +V KA + ++M I + +Y+ +I G +
Sbjct: 419 LKECGFRPSIISYGCLINLYVKIGKVPKALAVSKEMESHGIKHNNKTYSMLINGFIHLHD 478
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A + ++M + G PD A YN + +C + A + + M ++ + P+ T+
Sbjct: 479 FANAFSIFEDMIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMKKERMQPSNRTFRP 538
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
F + D++ + + M +GC P + L+ R+ +VE A+ + + M G
Sbjct: 539 IIEGFAVAGDMKRALDTLDLMRRSGCAPTVMTYNALIHGLIRKHQVERAVSVLDKMSIAG 598
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHK 217
++ G + +A + F ++ E G K
Sbjct: 599 IAPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLK 635
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 90/216 (41%), Gaps = 35/216 (16%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G P +++YN LI + QVE+A +++KM I+P+ +YT I+ G G
Sbjct: 559 MRRSGCAPTVMTYNALIHGLIRKHQVERAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGD 618
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLR----------------------- 97
KA + ++KE G D Y +R C + R++
Sbjct: 619 IGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNI 678
Query: 98 ------------DASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
+A+ LM +M E G+ PN T+ + + D++ + N+ M G
Sbjct: 679 LIDGWARRGDVWEAADLMKQMKEDGIPPNIHTFTSYINACCKAGDMQRAENVIQEMADVG 738
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGF 181
PN ++ L+K + + AL+ + +M G
Sbjct: 739 LKPNVKTFTTLIKGWAKVSLPDRALKCFEEMKSAGL 774
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 102/241 (42%), Gaps = 1/241 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G++P+ + L+ Y R + A VE+M+ E + V++Y+ +I G G
Sbjct: 279 MRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLEMTVVTYSILIAGYGKTND 338
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A + KE K + Y+ I +C + + A L+ EM E G+ Y+
Sbjct: 339 AESADKLFKEAKTKLDNLNGIIYSNIIHAHCQSGNMDRAEELVREMEEDGIDAPIDVYHS 398
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + D + ++ R+ G P+ S L+ L + KV AL + +M G
Sbjct: 399 MMHGYTVAQDEKKCLIVFERLKECGFRPSIISYGCLINLYVKIGKVPKALAVSKEMESHG 458
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEAL 239
+L + + A F +MI+ G +P + + ++A ++ N A+
Sbjct: 459 IKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKSGLQPDRAIYNLLVEAFCKMGNMDRAI 518
Query: 240 Q 240
+
Sbjct: 519 R 519
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 103/226 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G++ +V+Y+ LI Y K E A K+ ++ + + + + I Y++II G
Sbjct: 314 MKSEGLEMTVVTYSILIAGYGKTNDAESADKLFKEAKTKLDNLNGIIYSNIIHAHCQSGN 373
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A ++++EM+E G Y++ + Y +A+ + + + + E G P+ +Y
Sbjct: 374 MDRAEELVREMEEDGIDAPIDVYHSMMHGYTVAQDEKKCLIVFERLKECGFRPSIISYGC 433
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++ + + + M G N ++ L+ A ++ DM++ G
Sbjct: 434 LINLYVKIGKVPKALAVSKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKSG 493
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ ++L + C MG + A + F M ++ +PS +FR I
Sbjct: 494 LQPDRAIYNLLVEAFCKMGNMDRAIRIFERMKKERMQPSNRTFRPI 539
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 60/111 (54%), Gaps = 6/111 (5%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E G+ P+I ++ I+ CK +++A ++++M D + P+V ++T++I G V
Sbjct: 699 MKEDGIPPNIHTFTSYINACCKAGDMQRAENVIQEMADVGLKPNVKTFTTLIKGWAKVSL 758
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGL 111
PD+A +EMK G PD AAY +C+ L + +M+ G+
Sbjct: 759 PDRALKCFEEMKSAGLKPDEAAY------HCLVTSLLSRATVMEGSTYTGI 803
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 54/107 (50%)
Query: 13 YNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMK 72
YN LID + + V +A ++++M+++ I P++ ++TS I G +A +V++EM
Sbjct: 676 YNILIDGWARRGDVWEAADLMKQMKEDGIPPNIHTFTSYINACCKAGDMQRAENVIQEMA 735
Query: 73 EYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ G P+ + I+ + A +EM GL P+ Y+
Sbjct: 736 DVGLKPNVKTFTTLIKGWAKVSLPDRALKCFEEMKSAGLKPDEAAYH 782
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 39/80 (48%)
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
G AR + M+ G P+A + + + Y +A+ +R A ++EM +GL TY
Sbjct: 267 GDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLEMTVVTY 326
Query: 119 NLFFRVFYWSNDLRSSWNLY 138
++ + +ND S+ L+
Sbjct: 327 SILIAGYGKTNDAESADKLF 346
>gi|297806221|ref|XP_002870994.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316831|gb|EFH47253.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 819
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 108/219 (49%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G P IV+YN LI Y +D +++A ++ +M ++ PDV +YT+++ G G+ + A
Sbjct: 344 GFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESA 403
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++ +EM+ GC P+ +NA I+ Y + D + DE+ GLSP+ T+N V
Sbjct: 404 MNIFEEMRNAGCKPNICTFNAFIKMYGNRGKFVDMMKIFDEINVCGLSPDIVTWNTLLAV 463
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
F + ++ M G +P ++ L+ R E A+ ++ M++ G
Sbjct: 464 FGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPD 523
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + + L G ++EK EM + KP+++++
Sbjct: 524 LSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTY 562
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 122/267 (45%), Gaps = 3/267 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCK-DRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVG 59
M E G KP +++YN +++V+ K K +VEKM+ + I+PD +Y ++I
Sbjct: 234 MEEEGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGS 293
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+A V +EMK G D YNA + Y + R ++A +++EM G SP+ TYN
Sbjct: 294 LHQEAAQVFEEMKAAGFSHDKVTYNALLDVYGKSHRPKEAMKVLNEMELNGFSPSIVTYN 353
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ L + L +M G P+ + L+ +R KVE A+ ++ +M
Sbjct: 354 SLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMNIFEEMRNA 413
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
G I + + + GK V+ K F E+ G P V++ + A+ +
Sbjct: 414 GCKPNICTFNAFIKMYGNRGKFVDMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEV 473
Query: 240 QNLSNKMALFGPSMIPKREEYLAEMSA 266
+ +M G +P+RE + +SA
Sbjct: 474 SGVFKEMKRAG--FVPERETFNTLISA 498
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 101/224 (45%), Gaps = 1/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
++E G D+ SY LI + + +A + +KM +E P +I+Y I+ G +G
Sbjct: 199 LQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEEGCKPTLITYNVILNVFGKMGT 258
Query: 61 P-DKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
P +K ++++MK G PDA YN I ++A+ + +EM G S + TYN
Sbjct: 259 PWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSHDKVTYN 318
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
V+ S+ + + + M G P+ + L+ R ++ A++L N M EK
Sbjct: 319 ALLDVYGKSHRPKEAMKVLNEMELNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEK 378
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G + L GK+ A F EM G KP+ +F
Sbjct: 379 GTKPDVFTYTTLLSGFERAGKVESAMNIFEEMRNAGCKPNICTF 422
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 66/111 (59%), Gaps = 2/111 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+KPDI+SYN +I YC++ ++ A +I +MRD I PDVI+Y + IG ++A
Sbjct: 694 GIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRDSGIVPDVITYNTFIGSYAADSMFEEA 753
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNA 115
V++ M ++GC P+ YN+ + YC R +A ++++ + L P+A
Sbjct: 754 IGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDL--RNLDPHA 802
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 97/225 (43%), Gaps = 14/225 (6%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR G KP+I ++N I +Y + KI +++ +SPD++++ +++ G G
Sbjct: 410 MRNAGCKPNICTFNAFIKMYGNRGKFVDMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGM 469
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ V KEMK G P+ +N I Y A + M++ G++P+ +TYN
Sbjct: 470 DSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNT 529
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEK 179
S + M C PN + C L +E + L + + E+
Sbjct: 530 VLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKE-----IGLMHSLAEE 584
Query: 180 GFGSYILVSDVLFDLL------CDMGKLVEAEKSFLEMIEKGHKP 218
+ I VL L CD+ L EAE++F E+ E+G P
Sbjct: 585 VYSGVIEPRAVLLKTLVLVCSKCDL--LPEAERAFSELKERGFSP 627
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 109/232 (46%), Gaps = 1/232 (0%)
Query: 16 LIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYG 75
+I + K+ +V A + ++++ S DV SYTS+I G+ +A +V K+M+E G
Sbjct: 179 VISMLGKEGRVSSAANLFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEEG 238
Query: 76 CYPDAAAYNAAIRNYC-IAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSS 134
C P YN + + + + L+++M G++P+A TYN + + +
Sbjct: 239 CKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEA 298
Query: 135 WNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDL 194
++ M G + + L+ + + + + A+++ N+M GF I+ + L
Sbjct: 299 AQVFEEMKAAGFSHDKVTYNALLDVYGKSHRPKEAMKVLNEMELNGFSPSIVTYNSLISA 358
Query: 195 LCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKM 246
G L EA + +M EKG KP ++ + + E A K E+ N+ +M
Sbjct: 359 YARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMNIFEEM 410
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 101/226 (44%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G P+ ++N LI Y + E+A + +M D ++PD+ +Y +++ L G
Sbjct: 480 MKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGM 539
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+++ VL EM++ C P+ Y + + Y K + L +E+ + P A
Sbjct: 540 WEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKT 599
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
V + L + + + G P+ + +V + R++ V A ++ + M E+G
Sbjct: 600 LVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVGKANEVLDYMKERG 659
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
F + + L + ++E+ E++ KG KP +S+ +
Sbjct: 660 FTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTV 705
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 61/119 (51%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E G P + +YN L+ ++ + K+ +I+ ++ + I PD+ISY ++I +
Sbjct: 655 MKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTR 714
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
A + EM++ G PD YN I +Y +A G++ M++ G PN TYN
Sbjct: 715 MRDASRIFSEMRDSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYN 773
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 90/202 (44%), Gaps = 9/202 (4%)
Query: 51 IIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKG 110
+I LG G+ A ++ ++E G D +Y + I + + R R+A + +M E+G
Sbjct: 179 VISMLGKEGRVSSAANLFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEEG 238
Query: 111 LSPNATTYNLFFRVFYWSNDLRSSWN----LYCRMMGTGCLPNTQSCMFLVKLCKRQEKV 166
P TYN+ VF + + WN L +M G P+ + L+ CKR
Sbjct: 239 CKPTLITYNVILNVF---GKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLH 295
Query: 167 EIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR- 225
+ A Q++ +M GF + + L D+ + EA K EM G PS V++
Sbjct: 296 QEAAQVFEEMKAAGFSHDKVTYNALLDVYGKSHRPKEAMKVLNEMELNGFSPSIVTYNSL 355
Query: 226 IKALMELANKQEALQNLSNKMA 247
I A EA++ L N+MA
Sbjct: 356 ISAYARDGMLDEAME-LKNQMA 376
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 100/228 (43%), Gaps = 3/228 (1%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
++P V L+ V K + +A + ++++ SPD+ + S++ G KA
Sbjct: 590 IEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVGKAN 649
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+VL MKE G P A YN+ + + + + ++ E++ KG+ P+ +YN +
Sbjct: 650 EVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAY 709
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ +R + ++ M +G +P+ + + E A+ + M++ G
Sbjct: 710 CRNTRMRDASRIFSEMRDSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQ 769
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEK--GHKPSQVSFRRIKALME 231
+ + D C + + EA K F+E + H P R ++ +++
Sbjct: 770 NTYNSIVDGYCKLNRKDEA-KLFVEDLRNLDPHAPKGEDLRLLERIVK 816
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MR+ G+ PD+++YN I Y D E+A +V M P+ +Y SI+ G + +
Sbjct: 725 MRDSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNR 784
Query: 61 PDKARDVLKEMK 72
D+A+ +++++
Sbjct: 785 KDEAKLFVEDLR 796
>gi|125540047|gb|EAY86442.1| hypothetical protein OsI_07823 [Oryza sativa Indica Group]
Length = 703
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 124/240 (51%), Gaps = 1/240 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E+G +P +Y ++D C +R+ ++A +++++M ++ ++P V++ T++I G+
Sbjct: 138 MKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGR 197
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A VL+ MK GC P+ YNA ++ +C ++ A L+++M G++P+A TYNL
Sbjct: 198 MSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNL 257
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
R + S++ L M G G + + + L+ + + + A L++ + +G
Sbjct: 258 LIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRG 317
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEAL 239
+ + L + LC GK+ A K +M+ G P ++ I+ L ++ QE L
Sbjct: 318 IKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGL 377
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 105/224 (46%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G KP++ +YN L+ +C + +V KA ++ KMR ++PD ++Y +I G + G
Sbjct: 208 MKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGH 267
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A +L+ M+ G D YNA I C R A L D + +G+ PNA T+N
Sbjct: 268 IESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNS 327
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEK 179
S + +W +M+ GC P+T + F+ LCK + E L +M++K
Sbjct: 328 LINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQE-GLSFIGEMLQK 386
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ ++ L +++ EM+ G P V++
Sbjct: 387 DVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTY 430
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 100/223 (44%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+ P +V+ +I+ YCK+ ++ A +++E M+ P+V +Y +++ G G+
Sbjct: 173 MFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGK 232
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
KA +L +M+ G PDA YN IR CI + A L+ M GL + TYN
Sbjct: 233 VHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNA 292
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ +L+ + G PN + L+ + KV+IA + MV G
Sbjct: 293 LINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAG 352
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ LC M E EM++K KPS V++
Sbjct: 353 CTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNY 395
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 98/223 (43%), Gaps = 4/223 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G +PD ++N LI YC+ QV+ A + +KM + DV+SY ++I G G+
Sbjct: 37 MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYAALIEGFCETGR 96
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A ++ EM + PD Y A ++ C A R + ++ M E G P+ Y
Sbjct: 97 IDEAVELFGEMDQ----PDMHMYAALVKGLCKAGRGEEGLLMLRRMKELGWRPSTRAYAA 152
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
W + + + M G P +C ++ ++ ++ AL++ M +G
Sbjct: 153 VVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRG 212
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + L C+ GK+ +A +M G P V++
Sbjct: 213 CKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTY 255
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 97/228 (42%), Gaps = 41/228 (17%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSII----------GG 54
G+KP+ V++N LI+ CK +V+ A+K +EKM +PD +Y+S I G
Sbjct: 317 GIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEG 376
Query: 55 LGLVG---QPD----------------KARD------VLKEMKEYGCYPDAAAYNAAIRN 89
L +G Q D K R+ EM GC PD Y ++R
Sbjct: 377 LSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRA 436
Query: 90 YCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPN 149
YCI RL +A ++ EM + G++ + YN + ++ +M +PN
Sbjct: 437 YCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPN 496
Query: 150 TQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDV--LFDLL 195
+ L++ R VE L L G I ++DV LFD++
Sbjct: 497 QFTYFILLRHLVRMRLVEDVLPL----TPAGVWKAIELTDVFGLFDVM 540
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 98/209 (46%), Gaps = 5/209 (2%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G D+VSY LI+ +C+ ++++A ++ +M PD+ Y +++ GL G+ ++
Sbjct: 76 GFAQDVVSYAALIEGFCETGRIDEAVELFGEMD----QPDMHMYAALVKGLCKAGRGEEG 131
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+L+ MKE G P AY A + C ++ ++A ++ EM EKGL+P T
Sbjct: 132 LLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVINA 191
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + + + M GC PN + LV+ + KV A+ L N M G
Sbjct: 192 YCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPD 251
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIE 213
+ ++L C G +E+ L ++E
Sbjct: 252 AVTYNLLIRGQCIDGH-IESAFRLLRLME 279
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 98/239 (41%), Gaps = 4/239 (1%)
Query: 12 SYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEM 71
+YN +I C+ + A + + M PD ++ S+I G Q D ARD+ +M
Sbjct: 13 TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72
Query: 72 KEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDL 131
G D +Y A I +C R+ +A L EM + P+ Y + +
Sbjct: 73 PLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMDQ----PDMHMYAALVKGLCKAGRG 128
Query: 132 RSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVL 191
+ RM G P+T++ +V + K + A ++ +M EKG ++ +
Sbjct: 129 EEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAV 188
Query: 192 FDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMALFG 250
+ C G++ +A + M +G KP+ ++ + K L NKM + G
Sbjct: 189 INAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCG 247
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 97/243 (39%), Gaps = 17/243 (6%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + VKP V+Y +I K+R + +M +PDV++YT+ + + G+
Sbjct: 383 MLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGR 442
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A +VL EM + G D AYN + + + A ++ +M PN TY +
Sbjct: 443 LNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFI 502
Query: 121 FFRVF----------------YW-SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQ 163
R W + +L + L+ M LPN+ + +++
Sbjct: 503 LLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSED 562
Query: 164 EKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ E A L + M E + L C + ++A MI+ G P +S+
Sbjct: 563 GRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPHLMSY 622
Query: 224 RRI 226
+ +
Sbjct: 623 QHL 625
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/278 (20%), Positives = 108/278 (38%), Gaps = 58/278 (20%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD+V+Y + YC + ++ +A ++ +M ++ D ++Y +++ G +GQ
Sbjct: 418 MVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQ 477
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYC-----------------IAKRLRDASGLM 103
D A +LK+M P+ Y +R+ A L D GL
Sbjct: 478 TDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLF 537
Query: 104 DEMVEKGLSPNATTYNLFFRVFYWSNDLRS------------------------------ 133
D M + PN+ TY+ F S D R+
Sbjct: 538 DVMKKNEFLPNSGTYSSILEGF--SEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFC 595
Query: 134 -------SWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYIL 186
+W L C M+ G +P+ S L+ + + + A +++ + K + +
Sbjct: 596 KSKRYLDAWVLVCSMIQHGFIPHLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEI 655
Query: 187 VSDVLFDLLCDMGKLVEAEKSFLEMIEKGH-KPSQVSF 223
V V+ D L G + + + M+E+ + +PS ++
Sbjct: 656 VWKVIIDGLIKKGH-SDISREMIIMLERMNCRPSHQTY 692
>gi|302798519|ref|XP_002981019.1| hypothetical protein SELMODRAFT_114007 [Selaginella moellendorffii]
gi|300151073|gb|EFJ17720.1| hypothetical protein SELMODRAFT_114007 [Selaginella moellendorffii]
Length = 448
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 119/248 (47%), Gaps = 1/248 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E + P++ Y L+ +C+ R+++ AY++ +M P +Y ++ L G+
Sbjct: 175 MVEKEIVPNVDVYTSLLAAHCRTRKLDGAYRLFVEMIQRGYGPSASTYGLLLRCLCNGGR 234
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVE-KGLSPNATTYN 119
A D+ M+ G PD Y + I C+A R+ +A L E++E + +A YN
Sbjct: 235 SYLAYDIHSSMRSRGHVPDENTYASLIYGCCMAGRITEAKVLFKEVLEGEKAQLDAGIYN 294
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ ++ + + + M+ GC+P Q+ L+ + +V+ ALQL+ M EK
Sbjct: 295 VLIEGLCRASKVEEALEVTAGMVDKGCIPTLQTYNALIMGFFKANEVDKALQLFRAMEEK 354
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEAL 239
GF ++ D LC +GK+ EA + F + +E+G P V++ + + AN+ +
Sbjct: 355 GFSPNTMIYSTFIDGLCKVGKINEAHEFFQQSVERGCVPDNVTYNALIRGLFGANRMDEA 414
Query: 240 QNLSNKMA 247
L +M
Sbjct: 415 HRLYREMG 422
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 99/218 (45%), Gaps = 3/218 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G P +Y L+ C + AY I MR PD +Y S+I G + G+
Sbjct: 210 MIQRGYGPSASTYGLLLRCLCNGGRSYLAYDIHSSMRSRGHVPDENTYASLIYGCCMAGR 269
Query: 61 PDKARDVLKEMKE-YGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+A+ + KE+ E DA YN I C A ++ +A + MV+KG P TYN
Sbjct: 270 ITEAKVLFKEVLEGEKAQLDAGIYNVLIEGLCRASKVEEALEVTAGMVDKGCIPTLQTYN 329
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQ-SCMFLVKLCKRQEKVEIALQLWNDMVE 178
F+ +N++ + L+ M G PNT F+ LCK K+ A + + VE
Sbjct: 330 ALIMGFFKANEVDKALQLFRAMEEKGFSPNTMIYSTFIDGLCKVG-KINEAHEFFQQSVE 388
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGH 216
+G + + L L ++ EA + + EM E+G+
Sbjct: 389 RGCVPDNVTYNALIRGLFGANRMDEAHRLYREMGERGY 426
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 67/123 (54%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G P + +YN LI + K +V+KA ++ M ++ SP+ + Y++ I GL VG+
Sbjct: 316 MVDKGCIPTLQTYNALIMGFFKANEVDKALQLFRAMEEKGFSPNTMIYSTFIDGLCKVGK 375
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A + ++ E GC PD YNA IR A R+ +A L EM E+G + + L
Sbjct: 376 INEAHEFFQQSVERGCVPDNVTYNALIRGLFGANRMDEAHRLYREMGERGYIADRSLRTL 435
Query: 121 FFR 123
F+
Sbjct: 436 AFQ 438
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 97/223 (43%), Gaps = 1/223 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E GV PD SYN L+ K V++A ++ M E PDV++ ++ + +
Sbjct: 1 MLEDGVVPDRDSYNLLVRGLTKLSSVDQARAMLSTMVGEGYDPDVVTCGLLVDKFCEMKR 60
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ ++ +E++ G AYNA ++ + D V G P+ Y
Sbjct: 61 VGEVCELFQELESNGVAVGMLAYNAILKALMCSGDFDGGFKFSDIAVGDGSLPHVLAYKT 120
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ R + + M+ +P+ + L+ + + + + A+++++ MVEK
Sbjct: 121 MLDCLIKTGKTREASEVVGEMIKKS-VPDGMTYTALISVLCKHNRADDAMKVFDIMVEKE 179
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ V L C KL A + F+EMI++G+ PS ++
Sbjct: 180 IVPNVDVYTSLLAAHCRTRKLDGAYRLFVEMIQRGYGPSASTY 222
>gi|255660982|gb|ACU25660.1| pentatricopeptide repeat-containing protein [Glandularia araucana]
Length = 350
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 110/241 (45%), Gaps = 3/241 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G D ++Y L+ +CK+ ++K+ ++E + D +Y+++I GL
Sbjct: 59 MKKSGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVVDAFAYSAMINGLCKEAN 118
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A VL M + GC P+A YN I A + DA + EM SP TYN
Sbjct: 119 LDRAVSVLNGMIKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNT 178
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++NL ++ G P + L+K KVE ALQLWN + KG
Sbjct: 179 LINGLCKNEMFGEAYNLVKELLDKGLNPGVITYSMLMKGLCLDHKVEKALQLWNQVTSKG 238
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
F + + ++L LC +GK+ A + +M P+ VS LME K ++
Sbjct: 239 FKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHN---TLMEGFYKDGDIR 295
Query: 241 N 241
N
Sbjct: 296 N 296
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 92/181 (50%), Gaps = 3/181 (1%)
Query: 2 REMGV---KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLV 58
REMG P I++YN LI+ CK+ +AY +V+++ D+ ++P VI+Y+ ++ GL L
Sbjct: 162 REMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLNPGVITYSMLMKGLCLD 221
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
+ +KA + ++ G PD +N I C +++ A L +M +PN ++
Sbjct: 222 HKVEKALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSH 281
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
N FY D+R++ ++ R++ G P+ S +K ++ A+ +D V
Sbjct: 282 NTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGLCSCNRISDAILFLHDAVT 341
Query: 179 K 179
K
Sbjct: 342 K 342
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 93/204 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G KP+ YN LI+ + E A ++ +M SP +I+Y ++I GL
Sbjct: 129 MIKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEM 188
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A +++KE+ + G P Y+ ++ C+ ++ A L +++ KG P+ +N+
Sbjct: 189 FGEAYNLVKELLDKGLNPGVITYSMLMKGLCLDHKVEKALQLWNQVTSKGFKPDVQMHNI 248
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++ + +LY M C PN S L++ + + AL +W ++ G
Sbjct: 249 LIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNG 308
Query: 181 FGSYILVSDVLFDLLCDMGKLVEA 204
I+ ++ LC ++ +A
Sbjct: 309 LEPDIISYNITLKGLCSCNRISDA 332
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 93/238 (39%), Gaps = 35/238 (14%)
Query: 10 IVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLK 69
+ S+N ++ + +V++ I E M+ D I+Y ++ G G DK+ VL+
Sbjct: 33 VSSFNIMMRGLFDNDKVDEVISIWELMKKSGFVEDSITYGILVHGFCKNGYIDKSLHVLE 92
Query: 70 EMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSN 129
++ G DA AY+A I C L A +++ M++
Sbjct: 93 MAEQKGGVVDAFAYSAMINGLCKEANLDRAVSVLNGMIK--------------------- 131
Query: 130 DLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSD 189
+GC PN L+ K E A++++ +M I+ +
Sbjct: 132 --------------SGCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYN 177
Query: 190 VLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSNKMA 247
L + LC EA E+++KG P +++ + + L +K E L N++
Sbjct: 178 TLINGLCKNEMFGEAYNLVKELLDKGLNPGVITYSMLMKGLCLDHKVEKALQLWNQVT 235
>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 106/211 (50%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G++ ++ +YN LI+ CK +E+A +I+ +M DV +YT++I L G+ D+A
Sbjct: 492 GLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRA 551
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++L+EM + G P A YN + +C++ R+ L++ M+EK + PN TYN +
Sbjct: 552 HNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQ 611
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ +++S+ +Y M PN + L+K + ++ AL +M+EKG
Sbjct: 612 YCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLT 671
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
L LL K EA F +M +G
Sbjct: 672 ASSYSALIRLLNKKKKFSEARVFFDKMRNEG 702
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 104/218 (47%), Gaps = 2/218 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G++ + Y +I + C QV A +++E M ++ D + +T++I G G
Sbjct: 313 MAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGD 372
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
AR + +EM++ G D + A I C A L++A ++ EMV+KGL + TY +
Sbjct: 373 LAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTV 432
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+ ++ ++ ++ M+G PN + L LCK Q V A +L ++M K
Sbjct: 433 LIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCK-QGDVRAANELLHEMCNK 491
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHK 217
G + + L + LC G L +A + EM GH+
Sbjct: 492 GLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHR 529
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 105/224 (46%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV D V + +I +C + A ++ E+M+ ++ D +++T++I GL G+
Sbjct: 348 MTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGE 407
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A VL+EM + G D Y I YC + +A + +EMV + ++PN TY
Sbjct: 408 LKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTA 467
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
D+R++ L M G N + L+ LCK +E A+++ +M
Sbjct: 468 LSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFG-NLEQAMRIMTEMEAA 526
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G + + L D LC G+ A EM++KG KPS ++
Sbjct: 527 GHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATY 570
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 114/240 (47%), Gaps = 3/240 (1%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
EM PD+V+Y ++ YC ++E A K++++M + + + YTS+I L GQ
Sbjct: 280 EMSSPPDVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVS 339
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
A VL++M +G DA + I +C L A L +EM ++GL+ + T+
Sbjct: 340 DALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALI 399
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGF 181
+ +L+ + + M+ G + + L+ CKR VE A ++ N+MV +
Sbjct: 400 NGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVE-AFRVHNEMVGRRV 458
Query: 182 GSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQ 240
++ L D LC G + A + EM KG + + ++ I L + N ++A++
Sbjct: 459 APNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMR 518
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 110/228 (48%), Gaps = 4/228 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M++ G+ D V++ LI+ C+ ++++A +++++M D+ + DV++YT +I G G
Sbjct: 383 MQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGN 442
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A V EM P+ Y A C +R A+ L+ EM KGL N TYN
Sbjct: 443 MVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNS 502
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEK 179
+L + + M G + + L+ LCK E + A + +M++K
Sbjct: 503 LINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGE-FDRAHNMLQEMLDK 561
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLE-MIEKGHKPSQVSFRRI 226
G I +VL + C G+ VE K LE M+EK +P+ V++ +
Sbjct: 562 GIKPSIATYNVLMNGFCMSGR-VEGGKKLLEWMLEKNVRPNVVTYNSL 608
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 88/178 (49%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G+KP I +YN L++ +C +VE K++E M ++++ P+V++Y S++ +
Sbjct: 558 MLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKN 617
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++ K M P+ YN I+ +C A+ +++A EM+EKGL A++Y+
Sbjct: 618 MKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSA 677
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
R+ + + +M G F + + ++ +E + L +++VE
Sbjct: 678 LIRLLNKKKKFSEARVFFDKMRNEGLTAEPDVYSFYMDISFNEDNLESTITLCDELVE 735
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 113/272 (41%), Gaps = 38/272 (13%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYT----------- 49
M + G+ D+V+Y LID YCK + +A+++ +M ++P+V++YT
Sbjct: 418 MVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGD 477
Query: 50 ------------------------SIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNA 85
S+I GL G ++A ++ EM+ G D Y
Sbjct: 478 VRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTT 537
Query: 86 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 145
I C + A ++ EM++KG+ P+ TYN+ F S + L M+
Sbjct: 538 LIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKN 597
Query: 146 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 205
PN + L+K + ++ +++ M + ++L C + EA
Sbjct: 598 VRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEAL 657
Query: 206 KSFLEMIEKGHKPSQVSFRRIKALMELANKQE 237
EMIEKG + + S+ AL+ L NK++
Sbjct: 658 YFHQEMIEKGLRLTASSY---SALIRLLNKKK 686
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 94/216 (43%), Gaps = 13/216 (6%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+R+ G+ P S N ++ +++A + ++ D++ V S+ ++ L G
Sbjct: 219 LRQYGLSPSPESCNAVLSRL----PLDEAIALFRELPDKN----VCSHNILLKALLSAG- 269
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ +D + E PD Y + YC+ L +A L+DEM KGL NAT Y
Sbjct: 270 --RLKDACQHFDEMSSPPDVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLESNATVYTS 327
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTG-CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ + + + M G L + C + + + A +L+ +M ++
Sbjct: 328 VIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGD-LAAARRLFEEMQKR 386
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
G + + L + LC G+L EA++ EM++KG
Sbjct: 387 GLAADRVTHTALINGLCRAGELKEADRVLQEMVDKG 422
>gi|449433055|ref|XP_004134313.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18950-like [Cucumis sativus]
Length = 602
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 113/237 (47%), Gaps = 1/237 (0%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E G+ P ++N LI +CK++ + ++V M ++ +PD+ +Y II G
Sbjct: 255 EDGLTPCNDAFNKLISGFCKEKNHHRVLELVHTMIVKNRNPDIFTYQEIINGFCKNWMTL 314
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
+A +V +K+ G PD Y I +C +L DAS L EM++KG PN +YN
Sbjct: 315 QAFEVFNALKDRGYAPDMVMYTTLIHGFCKMGQLEDASKLWFEMIDKGFLPNEYSYNTLI 374
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
F +L + LY +M+ +G T SC L+ + + A + +M K
Sbjct: 375 YGFCKIGNLDEAMKLYKKMLDSGYKETTLSCNTLILGLCLHGRTDEAYDFFREMPCKNIV 434
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEA 238
++ + L C GK++++ E+ KG +PS S+ I+ L +L + QEA
Sbjct: 435 CDVITYNTLIQGFCREGKVLQSTDLLKELQAKGLQPSTSSYAHLIQKLCQLGSVQEA 491
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 116/235 (49%), Gaps = 3/235 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+++ G PD+V Y LI +CK Q+E A K+ +M D+ P+ SY ++I G +G
Sbjct: 323 LKDRGYAPDMVMYTTLIHGFCKMGQLEDASKLWFEMIDKGFLPNEYSYNTLIYGFCKIGN 382
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + K+M + G + N I C+ R +A EM K + + TYN
Sbjct: 383 LDEAMKLYKKMLDSGYKETTLSCNTLILGLCLHGRTDEAYDFFREMPCKNIVCDVITYNT 442
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEK 179
+ F + S +L + G P+T S L+ KLC+ V+ A ++WNDM +
Sbjct: 443 LIQGFCREGKVLQSTDLLKELQAKGLQPSTSSYAHLIQKLCQLG-SVQEAKEMWNDMHNR 501
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELA 233
G + D + LC+ G +VE + + M++ KP + +F + I++L+++
Sbjct: 502 GLQPMVCTRDHIISGLCEQGYVVEGMEWLITMLKSNLKPQKETFYKLIQSLIQIG 556
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 100/224 (44%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTS--IIGGLGLV 58
++E G +P + ++N K + + +K+ E M + + DV T +I
Sbjct: 181 LKEAGYRPYVETWNFAFQSCLKFGRTDLIWKLYEGMMETGVQKDVDIETVGYLIQAFCND 240
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
+ +A ++L++ E G P A+N I +C K L+ M+ K +P+ TY
Sbjct: 241 NKVSRAYEILRQSLEDGLTPCNDAFNKLISGFCKEKNHHRVLELVHTMIVKNRNPDIFTY 300
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
F + ++ ++ + G P+ L+ + ++E A +LW +M++
Sbjct: 301 QEIINGFCKNWMTLQAFEVFNALKDRGYAPDMVMYTTLIHGFCKMGQLEDASKLWFEMID 360
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
KGF + L C +G L EA K + +M++ G+K + +S
Sbjct: 361 KGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLDSGYKETTLS 404
>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
Length = 577
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 107/227 (47%), Gaps = 1/227 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD+V+ + +ID K ++ A +I + M ++P+ + Y+++I GL +
Sbjct: 117 MTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARK 176
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A ++L +MK+ C PD YN I C + + A DEM+E G P+ TYN+
Sbjct: 177 MDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNI 236
Query: 121 FFRVF-YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
F N +S +L GC + + +V + +K+E A+ L +
Sbjct: 237 LISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITAN 296
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
G I + L + LC MG+L EA ++++ G P V++ +
Sbjct: 297 GCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSL 343
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 116/251 (46%), Gaps = 3/251 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G P I +YN L++ CK ++E+A ++ K+ D +PDV++YTS+I GLG + +A
Sbjct: 16 GCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEA 75
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ KEM G D Y A IR ++ AS + M G P+ T +
Sbjct: 76 YKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDG 135
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGS 183
+ + ++ ++ M G PN L+ LCK + K++ AL++ M +
Sbjct: 136 LSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKAR-KMDCALEMLAQMKKAFCTP 194
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEALQNL 242
+ +VL D LC G + A F EM+E G KP ++ I + N A +L
Sbjct: 195 DTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSL 254
Query: 243 SNKMALFGPSM 253
+ + + G ++
Sbjct: 255 AQETTINGCTI 265
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 104/220 (47%), Gaps = 2/220 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G P I +YN L++ CK ++E+A ++ K+ D +PDV++YTS+I GLG + +A
Sbjct: 297 GCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEA 356
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ KEM G D Y A IR ++ AS + M G P+ T +
Sbjct: 357 YKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDG 416
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGS 183
+ + ++ ++ M G PN L+ LCK + K++ AL++ M +
Sbjct: 417 LSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKAR-KMDCALEMLAQMKKAFCTP 475
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ ++L D LC G + A F EM+E G KP ++
Sbjct: 476 DTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTY 515
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 107/219 (48%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G DI +Y ++D K++++E+A ++EK+ +P + +Y +++ GL +G+ ++A
Sbjct: 262 GCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEA 321
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
D+L+++ + GC PD Y + I KR +A L EM +GL+ + Y R
Sbjct: 322 IDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRE 381
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + + ++Y M GC+P+ + ++ + ++ A++++ M +G
Sbjct: 382 LLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPN 441
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+V L LC K+ A + +M + P +++
Sbjct: 442 EVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITY 480
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 97/208 (46%), Gaps = 2/208 (0%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PD+V+Y LID K+++ +AYK+ ++M ++ D + YT++I L G+ +A
Sbjct: 332 GCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQA 391
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
V K M +GC PD + I A R+ A + M +GL+PN Y+
Sbjct: 392 SSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHG 451
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEKGFGS 183
+ + + + +M C P+T + L+ LCK + VE A +++M+E G
Sbjct: 452 LCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGD-VEAARAFFDEMLEAGCKP 510
Query: 184 YILVSDVLFDLLCDMGKLVEAEKSFLEM 211
+ ++L C G A F +M
Sbjct: 511 DVYTYNILISGFCKAGNTDAACGVFDDM 538
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 91/181 (50%), Gaps = 2/181 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G PD+V+ + +ID K ++ A +I + M ++P+ + Y+++I GL +
Sbjct: 398 MTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARK 457
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A ++L +MK+ C PD YN I C + + A DEM+E G P+ TYN+
Sbjct: 458 MDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNI 517
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
F + + ++ ++ M + C N + L+ LCKR++ + +L + M E+
Sbjct: 518 LISGFCKAGNTDAACGVFDDMSSSRCSANVVTYGALISGLCKRRQLTKASLY-FQHMKER 576
Query: 180 G 180
G
Sbjct: 577 G 577
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 96/211 (45%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G+ D V Y LI + ++ +A + + M PDV++ +++I GL G+ A
Sbjct: 367 GLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAA 426
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
+ K M+ G P+ Y+A I C A+++ A ++ +M + +P+ TYN+
Sbjct: 427 VRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDG 486
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
S D+ ++ + M+ GC P+ + L+ + + A +++DM +
Sbjct: 487 LCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSAN 546
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
++ L LC +L +A F M E+G
Sbjct: 547 VVTYGALISGLCKRRQLTKASLYFQHMKERG 577
>gi|255584314|ref|XP_002532893.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527353|gb|EEF29498.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 625
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 113/216 (52%), Gaps = 4/216 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G+KPDIV+YN LI +CK+ ++ +A ++ +++RD +P+ ++YT++I G +
Sbjct: 261 MEREGIKPDIVTYNSLIHGFCKEGRMREAMRLFKEIRDA--TPNHVTYTTLIDGYCRLND 318
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + +EM+ G YP YN+ +R C R+RDA+ L++EM EK + P+ T N
Sbjct: 319 LDQALRLREEMEAQGLYPTVVTYNSILRKLCEIGRIRDANKLLNEMSEKKIEPDNVTCNT 378
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
+ D++S+ + RM+ G + + L+ CK +E ++ A +L M++
Sbjct: 379 LINAYCKIGDMKSALKVKNRMVEAGLKLDQFTYKALIHGFCKIRE-MDGAKELLLSMLDA 437
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
GF L D C+ K E + KG
Sbjct: 438 GFSPSYCTYSWLVDGYCNQQNEEAVLKLPDEFVRKG 473
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 105/227 (46%), Gaps = 4/227 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +GV+ +I YN LI CK VEKA ++ +M + + PD+ +Y ++I G
Sbjct: 191 MARIGVEANIHVYNVLIHACCKSGDVEKADNLLSEMESKCVFPDLFTYNTLISLYCKKGM 250
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A V M+ G PD YN+ I +C R+R+A L E+ + +PN TY
Sbjct: 251 HYEALSVQDRMEREGIKPDIVTYNSLIHGFCKEGRMREAMRLFKEI--RDATPNHVTYTT 308
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSC-MFLVKLCKRQEKVEIALQLWNDMVEK 179
+ NDL + L M G P + L KLC+ ++ A +L N+M EK
Sbjct: 309 LIDGYCRLNDLDQALRLREEMEAQGLYPTVVTYNSILRKLCEIG-RIRDANKLLNEMSEK 367
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ + L + C +G + A K M+E G K Q +++ +
Sbjct: 368 KIEPDNVTCNTLINAYCKIGDMKSALKVKNRMVEAGLKLDQFTYKAL 414
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 97/208 (46%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P+ V+Y LID YC+ +++A ++ E+M + + P V++Y SI+ L +G+ A +
Sbjct: 301 PNHVTYTTLIDGYCRLNDLDQALRLREEMEAQGLYPTVVTYNSILRKLCEIGRIRDANKL 360
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L EM E PD N I YC ++ A + + MVE GL + TY F
Sbjct: 361 LNEMSEKKIEPDNVTCNTLINAYCKIGDMKSALKVKNRMVEAGLKLDQFTYKALIHGFCK 420
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
++ + L M+ G P+ + +LV Q+ E L+L ++ V KG +
Sbjct: 421 IREMDGAKELLLSMLDAGFSPSYCTYSWLVDGYCNQQNEEAVLKLPDEFVRKGLCVDKSL 480
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
L C ++ A+K F M EKG
Sbjct: 481 YRALIRRFCKREQVDYAKKIFSLMQEKG 508
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 114/247 (46%), Gaps = 4/247 (1%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G +P + + L++ KDR + +K+ +KM + ++ Y +I G +KA
Sbjct: 160 GFRPHLHACTVLLNSLAKDRLTDMVWKVYKKMARIGVEANIHVYNVLIHACCKSGDVEKA 219
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
++L EM+ +PD YN I YC +A + D M +G+ P+ TYN
Sbjct: 220 DNLLSEMESKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRMEREGIKPDIVTYNSLIHG 279
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
F +R + L+ + PN + L+ R ++ AL+L +M +G
Sbjct: 280 FCKEGRMREAMRLFKEIRDAT--PNHVTYTTLIDGYCRLNDLDQALRLREEMEAQGLYPT 337
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLS 243
++ + + LC++G++ +A K EM EK +P V+ I A ++ + + AL+ +
Sbjct: 338 VVTYNSILRKLCEIGRIRDANKLLNEMSEKKIEPDNVTCNTLINAYCKIGDMKSALK-VK 396
Query: 244 NKMALFG 250
N+M G
Sbjct: 397 NRMVEAG 403
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 61/125 (48%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E ++PD V+ N LI+ YCK ++ A K+ +M + + D +Y ++I G + +
Sbjct: 364 MSEKKIEPDNVTCNTLINAYCKIGDMKSALKVKNRMVEAGLKLDQFTYKALIHGFCKIRE 423
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A+++L M + G P Y+ + YC + L DE V KGL + + Y
Sbjct: 424 MDGAKELLLSMLDAGFSPSYCTYSWLVDGYCNQQNEEAVLKLPDEFVRKGLCVDKSLYRA 483
Query: 121 FFRVF 125
R F
Sbjct: 484 LIRRF 488
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 57/137 (41%), Gaps = 1/137 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G P +Y+ L+D YC + E K+ ++ + + D Y ++I Q
Sbjct: 434 MLDAGFSPSYCTYSWLVDGYCNQQNEEAVLKLPDEFVRKGLCVDKSLYRALIRRFCKREQ 493
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A+ + M+E G D+ Y + Y + AS L+DEM ++ L Y
Sbjct: 494 VDYAKKIFSLMQEKGTLGDSVIYTSLAYAYWKLGKANAASDLLDEMYKRRLMITLKIYRA 553
Query: 121 FFRVFYWSNDLRS-SWN 136
+ N + S WN
Sbjct: 554 LNASYAGDNSILSLFWN 570
>gi|449480434|ref|XP_004155892.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18950-like [Cucumis sativus]
Length = 638
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 113/237 (47%), Gaps = 1/237 (0%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E G+ P ++N LI +CK++ + ++V M ++ +PD+ +Y II G
Sbjct: 291 EDGLTPCNDAFNKLISGFCKEKNHHRVLELVHTMIVKNRNPDIFTYQEIINGFCKNWMTL 350
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
+A +V +K+ G PD Y I +C +L DAS L EM++KG PN +YN
Sbjct: 351 QAFEVFNALKDRGYAPDMVMYTTLIHGFCKMGQLEDASKLWFEMIDKGFLPNEYSYNTLI 410
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
F +L + LY +M+ +G T SC L+ + + A + +M K
Sbjct: 411 YGFCKIGNLDEAMKLYKKMLDSGYKETTLSCNTLILGLCLHGRTDEAYDFFREMPCKNIV 470
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEA 238
++ + L C GK++++ E+ KG +PS S+ I+ L +L + QEA
Sbjct: 471 CDVITYNTLIQGFCREGKVLQSTDLLKELQAKGLQPSTSSYAHLIQKLCQLGSVQEA 527
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 116/235 (49%), Gaps = 3/235 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+++ G PD+V Y LI +CK Q+E A K+ +M D+ P+ SY ++I G +G
Sbjct: 359 LKDRGYAPDMVMYTTLIHGFCKMGQLEDASKLWFEMIDKGFLPNEYSYNTLIYGFCKIGN 418
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A + K+M + G + N I C+ R +A EM K + + TYN
Sbjct: 419 LDEAMKLYKKMLDSGYKETTLSCNTLILGLCLHGRTDEAYDFFREMPCKNIVCDVITYNT 478
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLV-KLCKRQEKVEIALQLWNDMVEK 179
+ F + S +L + G P+T S L+ KLC+ V+ A ++WNDM +
Sbjct: 479 LIQGFCREGKVLQSTDLLKELQAKGLQPSTSSYAHLIQKLCQLG-SVQEAKEMWNDMHNR 537
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELA 233
G + D + LC+ G +VE + + M++ KP + +F + I++L+++
Sbjct: 538 GLQPMVCTRDHIISGLCEQGYVVEGMEWLITMLKSNLKPQKETFYKLIQSLIQIG 592
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 100/224 (44%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTS--IIGGLGLV 58
++E G +P + ++N K + + +K+ E M + + DV T +I
Sbjct: 217 LKEAGYRPYVETWNFAFQSCLKFGRTDLIWKLYEGMMETGVQKDVDIETVGYLIQAFCND 276
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
+ +A ++L++ E G P A+N I +C K L+ M+ K +P+ TY
Sbjct: 277 NKVSRAYEILRQSLEDGLTPCNDAFNKLISGFCKEKNHHRVLELVHTMIVKNRNPDIFTY 336
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
F + ++ ++ + G P+ L+ + ++E A +LW +M++
Sbjct: 337 QEIINGFCKNWMTLQAFEVFNALKDRGYAPDMVMYTTLIHGFCKMGQLEDASKLWFEMID 396
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVS 222
KGF + L C +G L EA K + +M++ G+K + +S
Sbjct: 397 KGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLDSGYKETTLS 440
>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 117/217 (53%), Gaps = 6/217 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
MRE +P++ +Y ++D CK+R+++++ +I+ +M ++ + P V++Y ++I G G+
Sbjct: 345 MRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGR 404
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ A ++L M+ C P+ YN I + K + A L+ +M+E L+P+ TYN
Sbjct: 405 IEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNS 464
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQS-CMFLVKLCKRQEKVEIALQLWNDMVEK 179
V + S++ L + G +P+ + +F+ LCK +++E A L+N + EK
Sbjct: 465 LIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCK-SKRMEEACDLFNSLKEK 523
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGH 216
G + ++ L D C GK+ EA + ++E+ H
Sbjct: 524 GIKANEVMYTALIDGHCKAGKIDEA----ISLLERMH 556
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 104/223 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +P+ +YN LI + K + V KA ++ KM + ++P +++Y S+I G
Sbjct: 415 MESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGH 474
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A +L +KE G PD Y+ I C +KR+ +A L + + EKG+ N Y
Sbjct: 475 FDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTA 534
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + + +L RM CLPN+ + L+ ++ KV+ L + +M + G
Sbjct: 535 LIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMG 594
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ +L + + G A + F +M+ GHKP ++
Sbjct: 595 VKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTY 637
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 106/223 (47%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G + + VSY +I C+ ++++ + +KMR++D P V +YT II L +
Sbjct: 275 MPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDR 334
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+ D+ EM+E C P+ Y + C ++L ++ +++EM+EKGL P+ TYN
Sbjct: 335 NLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNA 394
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
R + + ++ + M C PN ++ L+ +++ V A+ L + M+E
Sbjct: 395 LIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESK 454
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + L + C G A K + E G P Q ++
Sbjct: 455 LTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTY 497
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 102/223 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E + P +V+YN LI V CK + AYK+++ +++ + PD +Y+ I L +
Sbjct: 450 MLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKR 509
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A D+ +KE G + Y A I +C A ++ +A L++ M + PN++TYN
Sbjct: 510 MEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNS 569
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++ ++ M G P + L++ R+ + A +++N MV G
Sbjct: 570 LIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFG 629
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ C G + EAE MIE G P +++
Sbjct: 630 HKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTY 672
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 73/142 (51%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
P+ +YN LI CK+ +V++ +VE M + P V +YT +I + G D A V
Sbjct: 562 PNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRV 621
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
+M +G PD Y A I YC + +++A G+M M+E G+ P++ TY L +
Sbjct: 622 FNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYER 681
Query: 128 SNDLRSSWNLYCRMMGTGCLPN 149
++N+ RM+ GC P+
Sbjct: 682 LGLAYDAFNVLKRMLDAGCDPS 703
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 102/222 (45%), Gaps = 2/222 (0%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ P+I + N +++ Y K + +A V K+ +SPD +YTS+I G + A
Sbjct: 210 IVPNIYTLNTMVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAY 269
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
V M GC + +Y I C A R+ + L +M E P TY +
Sbjct: 270 KVFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHAL 329
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYI 185
+ ++ +L+ M C PN + +V ++ K++ + ++ N+M+EKG +
Sbjct: 330 FGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSV 389
Query: 186 LVSDVLFDLLCDMGKLVEAEKSFLEMIEKGH-KPSQVSFRRI 226
+ + L C+ G+ +EA L ++E + +P++ ++ +
Sbjct: 390 VTYNALIRGYCEEGR-IEAALEILGLMESNNCRPNERTYNEL 430
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 101/220 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
++E G+ PD +Y+ ID CK +++E+A + ++++ I + + YT++I G G+
Sbjct: 485 LKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGK 544
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A +L+ M C P+++ YN+ I C ++++ +++ M + G+ P TY +
Sbjct: 545 IDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTI 604
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
D + ++ +M+ G P+ + + V+ A + M+E G
Sbjct: 605 LIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAG 664
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQ 220
L +L +G +A M++ G PS
Sbjct: 665 VMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAGCDPSH 704
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 100/224 (44%), Gaps = 2/224 (0%)
Query: 1 MREMGVKPDIVSYNCLID-VYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVG 59
MRE P + +Y +I ++ DR +E + +MR+ P+V +YT ++ +
Sbjct: 310 MREDDCYPTVRTYTVIIHALFGNDRNLE-GMDLFNEMRERSCEPNVHTYTVMVDAMCKER 368
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+ D++R +L EM E G P YNA IR YC R+ A ++ M PN TYN
Sbjct: 369 KLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYN 428
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
F + + L +M+ + P+ + L+ + + + A +L + + E
Sbjct: 429 ELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKEN 488
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G V D LC ++ EA F + EKG K ++V +
Sbjct: 489 GLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMY 532
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 55/119 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M +MGVKP + +Y LI+ ++ + A ++ +M PDV +YT+ I G
Sbjct: 590 MSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGN 649
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
+A ++ M E G PD+ Y I Y DA ++ M++ G P+ +N
Sbjct: 650 VKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAGCDPSHPIWN 708
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G KPD+ +Y I YC V++A ++ +M + + PD ++YT +I +G
Sbjct: 625 MVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGL 684
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAI 87
A +VLK M + GC P +N I
Sbjct: 685 AYDAFNVLKRMLDAGCDPSHPIWNNLI 711
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 95/239 (39%), Gaps = 45/239 (18%)
Query: 45 VISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMD 104
V SY ++ L D+ + V EM P+ N + Y + +A+ +
Sbjct: 179 VRSYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVS 238
Query: 105 EMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCK-- 161
++ + GLSP++ TY + +ND+ S++ ++ M GC N S ++ LC+
Sbjct: 239 KIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAG 298
Query: 162 ---------------------RQEKVEI-----------ALQLWNDMVEKGFGSYILVSD 189
R V I + L+N+M E+ +
Sbjct: 299 RIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYT 358
Query: 190 VLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR----------RIKALMELANKQEA 238
V+ D +C KL E+ + EM+EKG PS V++ RI+A +E+ E+
Sbjct: 359 VMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMES 417
>gi|255660962|gb|ACU25650.1| pentatricopeptide repeat-containing protein [Verbena officinalis]
Length = 376
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 109/241 (45%), Gaps = 3/241 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+E G D ++Y L+ +CK+ ++K+ ++E + D +Y+++I GL
Sbjct: 85 MKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEAN 144
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D+A VL M + GC P+ YN I A + DA + EM SP TYN
Sbjct: 145 LDRALSVLNGMIKSGCKPNVHVYNTLINGLAGASKFEDAIRVFREMGTMHCSPTIITYNT 204
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ ++NL ++ G P + L+K KVE ALQLWN + KG
Sbjct: 205 LINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHKVERALQLWNQVTSKG 264
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
F + + ++L LC +GK+ A + +M P+ VS LME K ++
Sbjct: 265 FKPDVQMHNILIHGLCSVGKIQLALSLYFDMNRWKCAPNLVSHN---TLMEGFYKDGDIR 321
Query: 241 N 241
N
Sbjct: 322 N 322
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 91/181 (50%), Gaps = 3/181 (1%)
Query: 2 REMGV---KPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLV 58
REMG P I++YN LI+ CK+ +AY +V+++ D+ + P VI+Y+ ++ GL L
Sbjct: 188 REMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLD 247
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
+ ++A + ++ G PD +N I C +++ A L +M +PN ++
Sbjct: 248 HKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKIQLALSLYFDMNRWKCAPNLVSH 307
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
N FY D+R++ ++ R++ G P+ S +K ++ A+ +D V
Sbjct: 308 NTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGLCSCNRISDAILFLHDAVT 367
Query: 179 K 179
K
Sbjct: 368 K 368
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 94/204 (46%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + G KP++ YN LI+ + E A ++ +M SP +I+Y ++I GL
Sbjct: 155 MIKSGCKPNVHVYNTLINGLAGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEM 214
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A +++KE+ + G P Y+ ++ C+ ++ A L +++ KG P+ +N+
Sbjct: 215 FGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQMHNI 274
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
++ + +LY M C PN S L++ + + AL +W ++ G
Sbjct: 275 LIHGLCSVGKIQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNG 334
Query: 181 FGSYILVSDVLFDLLCDMGKLVEA 204
I+ ++ LC ++ +A
Sbjct: 335 LEPDIISYNITLKGLCSCNRISDA 358
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 109/245 (44%), Gaps = 1/245 (0%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E V PD V YN +++ Y + +++ +++ E M E + V S+ ++ GL G+ D
Sbjct: 18 ESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEG-NRSVSSFNIMMRGLFDNGKVD 76
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
+ + + MKE G D+ Y + +C + + +++ +KG +A Y+
Sbjct: 77 EVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMI 136
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
+L + ++ M+ +GC PN L+ K E A++++ +M
Sbjct: 137 NGLCKEANLDRALSVLNGMIKSGCKPNVHVYNTLINGLAGASKFEDAIRVFREMGTMHCS 196
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNL 242
I+ + L + LC EA E+++KG P +++ + + L +K E L
Sbjct: 197 PTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHKVERALQL 256
Query: 243 SNKMA 247
N++
Sbjct: 257 WNQVT 261
Score = 40.8 bits (94), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 70/161 (43%), Gaps = 1/161 (0%)
Query: 59 GQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
G D A V KE+ E PDA YNA + Y +++D L + M +G + + +++
Sbjct: 4 GDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEG-NRSVSSF 62
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVE 178
N+ R + + + +++ M +G + ++ + LV + ++ +L + +
Sbjct: 63 NIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQ 122
Query: 179 KGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPS 219
KG + + LC L A MI+ G KP+
Sbjct: 123 KGGVLDAFAYSAMINGLCKEANLDRALSVLNGMIKSGCKPN 163
Score = 37.4 bits (85), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 66/155 (42%), Gaps = 4/155 (2%)
Query: 91 CIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNT 150
C + + A + E+VE +SP+A YN ++ ++ + L+ MMG+ +
Sbjct: 1 CESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELW-EMMGSEGNRSV 59
Query: 151 QSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLE 210
S +++ KV+ + +W M E GF + +L C G ++ LE
Sbjct: 60 SSFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNG-YIDKSLHVLE 118
Query: 211 MIE-KGHKPSQVSFRR-IKALMELANKQEALQNLS 243
M E KG ++ I L + AN AL L+
Sbjct: 119 MAEQKGGVLDAFAYSAMINGLCKEANLDRALSVLN 153
>gi|296085435|emb|CBI29167.3| unnamed protein product [Vitis vinifera]
Length = 192
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 100/183 (54%), Gaps = 4/183 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M GV + SY+ +D+ CK + +A K+ ++M+ + I DV++Y ++I +GL
Sbjct: 1 MDRRGVCKSLYSYSIYMDIQCKSGKPWRAVKLYKEMKKKGIRLDVVAYNTVIRAIGLSEG 60
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D + V +EMKE GC P+ YN I+ C R+R+A G+ D+M EKG +PN TY+
Sbjct: 61 VDFSIRVFREMKEVGCEPNVVTYNTIIKLLCENGRIREAYGVFDQMREKGYAPNVITYHC 120
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
FF W LR + ++ +M GC P+ + L+ ++ V++A + +M+ KG
Sbjct: 121 FFG---WGF-LRPVFIVWKKMEEQGCSPDACAYNALIDALVQKGMVDLARKYEEEMLAKG 176
Query: 181 FGS 183
+
Sbjct: 177 LSA 179
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 71/179 (39%), Gaps = 19/179 (10%)
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
R V K + Y Y D C + + A L EM +KG+ + YN R
Sbjct: 4 RGVCKSLYSYSIYMDIQ---------CKSGKPWRAVKLYKEMKKKGIRLDVVAYNTVIRA 54
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
S + S ++ M GC PN + ++KL ++ A +++ M EKG+
Sbjct: 55 IGLSEGVDFSIRVFREMKEVGCEPNVVTYNTIIKLLCENGRIREAYGVFDQMREKGYAPN 114
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI------KALMELANKQE 237
++ F G L + +M E+G P ++ + K +++LA K E
Sbjct: 115 VITYHCFFGW----GFLRPVFIVWKKMEEQGCSPDACAYNALIDALVQKGMVDLARKYE 169
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/119 (21%), Positives = 59/119 (49%)
Query: 106 MVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEK 165
M +G+ + +Y+++ + S + LY M G + + +++ E
Sbjct: 1 MDRRGVCKSLYSYSIYMDIQCKSGKPWRAVKLYKEMKKKGIRLDVVAYNTVIRAIGLSEG 60
Query: 166 VEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR 224
V+ +++++ +M E G ++ + + LLC+ G++ EA F +M EKG+ P+ +++
Sbjct: 61 VDFSIRVFREMKEVGCEPNVVTYNTIIKLLCENGRIREAYGVFDQMREKGYAPNVITYH 119
>gi|297733848|emb|CBI15095.3| unnamed protein product [Vitis vinifera]
Length = 815
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 112/240 (46%), Gaps = 27/240 (11%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVE--------------------KAYKIVEKMRDED 40
M E G D+ S+N ++DV CK ++VE +A++ +M+
Sbjct: 162 MHEHGCVQDLNSFNTILDVLCKSKRVEMADNKLFKVFRGFFRAGQLKEAWEFFLQMKKRK 221
Query: 41 ISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDAS 100
DV++YT+++ G G+ G+ KA+ V EM G P A YNA I+ C + +A
Sbjct: 222 CEIDVVTYTTVVHGFGVAGEVRKAQRVFNEMIGEGVLPSVATYNAFIQVLCKKDNVENAI 281
Query: 101 GLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLC 160
+ +EM+ KG PN+TTYN+ R + + RM C PN Q +++
Sbjct: 282 SVFEEMLRKGYMPNSTTYNVVIRGLCHVGRMEKAMEFMARMKDDECEPNVQIYNVVIRYF 341
Query: 161 KRQEKVEIALQLWNDMVEK----GFGSY-ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
E++E L ++ M + +Y IL+S + D L+ A K +EM+E+G
Sbjct: 342 CDAEEIEKGLNVFEKMGDADCLPNLDTYNILISAMFVRKKSDY--LLTAGKLLIEMVERG 399
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 104/230 (45%), Gaps = 16/230 (6%)
Query: 12 SYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEM 71
S++ ID+ + R + + +V++MR + P+ ++ I G+PD+A + M
Sbjct: 103 SFDHAIDIAGRLRDYKTLWTLVDRMRTRRLGPNPKTFAIITERYVSAGKPDRAIKIFFSM 162
Query: 72 KEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDL 131
E+GC D ++N + C +KR+ EM + L FR F+ + L
Sbjct: 163 HEHGCVQDLNSFNTILDVLCKSKRV--------EMADNKLFK-------VFRGFFRAGQL 207
Query: 132 RSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVL 191
+ +W + +M C + + +V +V A +++N+M+ +G + +
Sbjct: 208 KEAWEFFLQMKKRKCEIDVVTYTTVVHGFGVAGEVRKAQRVFNEMIGEGVLPSVATYNAF 267
Query: 192 FDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEALQ 240
+LC + A F EM+ KG+ P+ ++ I+ L + ++A++
Sbjct: 268 IQVLCKKDNVENAISVFEEMLRKGYMPNSTTYNVVIRGLCHVGRMEKAME 317
>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
Length = 793
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 115/230 (50%), Gaps = 1/230 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M E G+ PD+++YN LID CK V KA+ ++++M + D + +++ L +
Sbjct: 411 MTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKR 470
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
++A ++L+ + G PD +Y + Y + A L DEM+++ L+P+ +TYN
Sbjct: 471 YEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNT 530
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ L + + +M G +P+ + ++ ++ +E A Q N MVE
Sbjct: 531 LIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENS 590
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKAL 229
F ++ + L + LC G+L +A K F +EKG K +++ I+AL
Sbjct: 591 FKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQAL 640
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 122/258 (47%), Gaps = 5/258 (1%)
Query: 1 MREMG-VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVG 59
M ++G V PD+V+YN L+D K ++ A ++E+MR++ + ++++ I+ GL G
Sbjct: 340 MEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREG 399
Query: 60 QPDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYN 119
Q ++A L+ M E G PD YN I C A + A LMDEMV GL + T N
Sbjct: 400 QLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLN 459
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ L G +P+ S ++ ++ K E AL LW++M+++
Sbjct: 460 TLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKR 519
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFR-RIKALMELANKQEA 238
I + L L MGKL EA E++E G P ++ I A + + ++A
Sbjct: 520 KLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKA 579
Query: 239 LQNLSNKMA--LFGPSMI 254
Q NKM F P ++
Sbjct: 580 FQ-FHNKMVENSFKPDVV 596
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 103/218 (47%), Gaps = 1/218 (0%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G+ PD V+YN L++ +C+ + +A ++ +M+ E I P +Y +++ +G
Sbjct: 235 MQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAYARLGW 294
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGL-SPNATTYN 119
+A DV++ M +G PD YN C A ++ +A L DEM + G+ SP+ TYN
Sbjct: 295 IKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYN 354
Query: 120 LFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEK 179
+ + NL M G + + +VK R+ ++E AL M E+
Sbjct: 355 TLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEE 414
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHK 217
G ++ + L D C G + +A EM+ G K
Sbjct: 415 GLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLK 452
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 105/229 (45%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
+ G PD VSY ++ Y K+ + E A + ++M ++P + +Y ++I GL +G+
Sbjct: 483 QRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLT 542
Query: 63 KARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFF 122
+A D L E+ E G PD YN I YC L A ++MVE P+ T N
Sbjct: 543 EAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLM 602
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
L + L+ + G + + L++ + V+ AL+ + DM +G
Sbjct: 603 NGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQ 662
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALME 231
+ +VL L + G+ VEA+K ++ E G + + IK+ +E
Sbjct: 663 PDVFTYNVLLSALSEAGRSVEAQKMLHKLNESGKLYGRFFYPSIKSSVE 711
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 104/222 (46%), Gaps = 1/222 (0%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ P+ ++N L+ +C + A + KM+ +SPD ++Y +++ G +AR
Sbjct: 205 LHPNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEAR 264
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
+L MK+ G P A YN + Y ++ A+ +++ M G P+ TYN+
Sbjct: 265 TLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGL 324
Query: 126 YWSNDLRSSWNLYCRMMGTGCL-PNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+ + ++ L M G + P+ + LV C + ++ AL L +M EKG S
Sbjct: 325 CQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSS 384
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ +++ LC G+L EA M E+G P +++ +
Sbjct: 385 LVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTL 426
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 101/228 (44%), Gaps = 25/228 (10%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+ EMG+ PD +YN +I YCK+ +EKA++ KM + PDV++ +++ GL L G+
Sbjct: 551 LMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGR 610
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+KA + + E G D YN I+ C + A +M +GL P+ TYN+
Sbjct: 611 LEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNV 670
Query: 121 FFRVFYWS----------NDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQE---KVE 167
+ + L S LY R P+ +S + V+ K E +E
Sbjct: 671 LLSALSEAGRSVEAQKMLHKLNESGKLYGRFF----YPSIKSSVEAVETGKDPEVKSDIE 726
Query: 168 IALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
D E + YI LC G+L EA+ EM++KG
Sbjct: 727 SVGNTQGDDQE-SYNKYI-------KELCIGGQLKEAKAVLDEMMQKG 766
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 69/152 (45%), Gaps = 36/152 (23%)
Query: 3 EMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPD 62
E G K D+++YN LI CKD V+ A + M + PDV +Y ++ L G+
Sbjct: 623 EKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSV 682
Query: 63 KARDVLKEMKEYG------CYP------------------------------DAAAYNAA 86
+A+ +L ++ E G YP D +YN
Sbjct: 683 EAQKMLHKLNESGKLYGRFFYPSIKSSVEAVETGKDPEVKSDIESVGNTQGDDQESYNKY 742
Query: 87 IRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
I+ CI +L++A ++DEM++KG+S + +TY
Sbjct: 743 IKELCIGGQLKEAKAVLDEMMQKGMSVDNSTY 774
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 81/211 (38%), Gaps = 3/211 (1%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDED-ISPDVISYTSIIGGLGLV--GQPDKA 64
P + + Y + R A +++ R + P + + +++ L P +
Sbjct: 134 PTSALADAALSTYARLRLPHLAAQLLHSFRRRGCVRPSLQAANAVLSALARSPSTSPQAS 193
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
D + +P+ +N + +C L DA + +M GLSP+A TYN
Sbjct: 194 LDAFHSLIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNA 253
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
L + L RM G +P + LV R ++ A + M GF
Sbjct: 254 HCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPD 313
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKG 215
+ +VL LC GK+ EA K EM + G
Sbjct: 314 LWTYNVLAAGLCQAGKVDEAFKLKDEMEQLG 344
>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
Length = 616
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 114/219 (52%), Gaps = 2/219 (0%)
Query: 6 VKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKAR 65
+ PD+++Y L++ C+ QV+ A+ ++E++ + PDVI+YTS++ GL G+ ++A
Sbjct: 302 ILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAH 361
Query: 66 DVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVF 125
++KEM GC Y++ + YC A + A ++ EMV + P TYN+
Sbjct: 362 KLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGL 421
Query: 126 YWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG-FGSY 184
+ + +L ++ G +P+ + L+ + +V A L ++M +G F +
Sbjct: 422 IKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPND 481
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
+ + V+F LC +G++ +A +EM K H P+ V +
Sbjct: 482 VTLGSVVFG-LCRVGRVDDAWSLVVEMSRKRHAPNVVVY 519
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 113/226 (50%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
++ M PD+V++N L+D +CK + +A +++E+M E+I PDVI+YT ++ GL VGQ
Sbjct: 262 LKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQ 321
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
A +L+E+ G PD AY + + C + + +A L+ EM +G Y+
Sbjct: 322 VQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSS 381
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
+ + ++ + + M+ +P + ++ + + A+ L +D+V +G
Sbjct: 382 LVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARG 441
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
+ ++ + L D LC ++ EA EM +G P+ V+ +
Sbjct: 442 YVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSV 487
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 123/254 (48%), Gaps = 7/254 (2%)
Query: 8 PDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDV 67
PDIV+YN LI+ + + ++ +A EKM+ I+PDV++ ++ G+ G ++A ++
Sbjct: 167 PDIVTYNTLINAFYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEI 226
Query: 68 LKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYW 127
L MK G PD YN+ I C+A ++ +A+ ++ M SP+ T+N F
Sbjct: 227 LDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTM---SCSPDLVTFNTLLDGFCK 283
Query: 128 SNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILV 187
+ L + + M LP+ + LV R +V++A L ++V +G+ ++
Sbjct: 284 AGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIA 343
Query: 188 SDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRR-IKALMELANKQEALQNLSNKM 246
L D LC G++ EA K EM +G + V + + N +A + L+ +
Sbjct: 344 YTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMV 403
Query: 247 ALFGPSMIPKREEY 260
++ +M+P Y
Sbjct: 404 SI---NMVPPLFTY 414
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 105/224 (46%), Gaps = 5/224 (2%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G P++V++ LI CK Q +A + + + + ++PDV + +I GL G PD+A
Sbjct: 57 GCSPNLVTFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQA 116
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKG--LSPNATTYNLFF 122
+ + M+ P+ YN I C + L A L++EM+ KG +P+ TYN
Sbjct: 117 VKLFENMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLI 176
Query: 123 RVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFG 182
FY ++ +R + +M G P+ +C LV + VE AL++ + M G
Sbjct: 177 NAFYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPV 236
Query: 183 SYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRI 226
++ + + LC GK+VEA + M P V+F +
Sbjct: 237 PDVITYNSIIHALCVAGKVVEAAEILKTM---SCSPDLVTFNTL 277
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 112/224 (50%), Gaps = 5/224 (2%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G+ PD+++ N L+ CKD VE+A +I++ M+ PDVI+Y SII L + G+
Sbjct: 195 MKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGK 254
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A ++LK M C PD +N + +C A L A +++EM + + P+ TY +
Sbjct: 255 VVEAAEILKTMS---CSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTI 311
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMVEK 179
++ ++ L ++ G +P+ + LV LCK E +E A +L +M +
Sbjct: 312 LVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGE-IEEAHKLVKEMSVR 370
Query: 180 GFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
G + +++ L C G + +A + EM+ P ++
Sbjct: 371 GCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTY 414
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 116/265 (43%)
Query: 5 GVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKA 64
G PD+++Y L+D CK ++E+A+K+V++M V+ Y+S++ G G KA
Sbjct: 336 GYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKA 395
Query: 65 RDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRV 124
R++L EM P YN + + A L+ ++V +G P+ TYN
Sbjct: 396 REILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDG 455
Query: 125 FYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSY 184
+N +R + +L M GC PN + +V R +V+ A L +M K
Sbjct: 456 LCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPN 515
Query: 185 ILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQNLSN 244
++V L D LC ++ +A M +G ++R++ M + + +
Sbjct: 516 VVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEAMAMYD 575
Query: 245 KMALFGPSMIPKREEYLAEMSASDS 269
+M G + L E + S+S
Sbjct: 576 EMVARGFLPDGSTSKTLEEAAMSNS 600
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 102/226 (45%), Gaps = 7/226 (3%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
+ E V PD+ +N LI KD ++A K+ E M + P++++Y ++I GL G
Sbjct: 88 LDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISGLCKSGN 147
Query: 61 PDKARDVLKEMKEYG--CYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTY 118
+KAR++L+EM G PD YN I + A R+R+A ++M G++P+ T
Sbjct: 148 LEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGINPDVLTC 207
Query: 119 NLFFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVK-LCKRQEKVEIALQLWNDMV 177
N+ D+ + + M G +P+ + ++ LC + VE A L
Sbjct: 208 NILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTMSC 267
Query: 178 EKGFGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSF 223
++ + L D C G L A + EM + P +++
Sbjct: 268 SPDLVTF----NTLLDGFCKAGMLPRALEVLEEMCRENILPDVITY 309
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 112/250 (44%), Gaps = 3/250 (1%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M+ G PD+++YN +I C +V +A +I++ M SPD++++ +++ G G
Sbjct: 230 MKLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGM 286
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A +VL+EM PD Y + C +++ A L++E+V +G P+ Y
Sbjct: 287 LPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTS 346
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
S ++ + L M GC LV R V A ++ +MV
Sbjct: 347 LVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSIN 406
Query: 181 FGSYILVSDVLFDLLCDMGKLVEAEKSFLEMIEKGHKPSQVSFRRIKALMELANKQEALQ 240
+ +++ L G + +A +++ +G+ P V++ + + AN+
Sbjct: 407 MVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREAC 466
Query: 241 NLSNKMALFG 250
+L+++MA G
Sbjct: 467 DLADEMASRG 476
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 82/181 (45%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M + + P + +YN ++ KD + KA ++ + PDV++Y ++I GL +
Sbjct: 402 MVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANR 461
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
+A D+ EM GC+P+ + + C R+ DA L+ EM K +PN Y
Sbjct: 462 VREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTS 521
Query: 121 FFRVFYWSNDLRSSWNLYCRMMGTGCLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKG 180
S+ + + + M G G + + L+ +V A+ ++++MV +G
Sbjct: 522 LIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVARG 581
Query: 181 F 181
F
Sbjct: 582 F 582
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 69/142 (48%), Gaps = 6/142 (4%)
Query: 1 MREMGVKPDIVSYNCLIDVYCKDRQVEKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQ 60
M G P+ V+ ++ C+ +V+ A+ +V +M + +P+V+ YTS+I GL +
Sbjct: 472 MASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDR 531
Query: 61 PDKARDVLKEMKEYGCYPDAAAYNAAIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNL 120
D A VL M+ G D AY I + R+ +A + DEMV +G P+ +T
Sbjct: 532 MDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVARGFLPDGSTSKT 591
Query: 121 F------FRVFYWSNDLRSSWN 136
VF W+N ++W+
Sbjct: 592 LEEAAMSNSVFEWTNLEENAWS 613
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.136 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,112,449,323
Number of Sequences: 23463169
Number of extensions: 164734408
Number of successful extensions: 525120
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 6687
Number of HSP's successfully gapped in prelim test: 4011
Number of HSP's that attempted gapping in prelim test: 412512
Number of HSP's gapped (non-prelim): 68445
length of query: 272
length of database: 8,064,228,071
effective HSP length: 140
effective length of query: 132
effective length of database: 9,074,351,707
effective search space: 1197814425324
effective search space used: 1197814425324
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 75 (33.5 bits)