Query 048617
Match_columns 281
No_of_seqs 140 out of 199
Neff 3.4
Searched_HMMs 29240
Date Mon Mar 25 19:36:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048617.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/048617hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gwy_A Putative CTP pyrophosph 99.7 8.8E-17 3E-21 125.4 10.0 93 131-240 3-98 (140)
2 1mut_A MUTT, nucleoside tripho 99.7 4.2E-17 1.4E-21 123.4 7.1 88 132-235 2-89 (129)
3 3r03_A Nudix hydrolase; struct 99.7 2E-16 6.7E-21 122.5 10.0 96 130-239 4-100 (144)
4 3grn_A MUTT related protein; s 99.7 9.5E-16 3.3E-20 121.1 13.1 93 133-240 7-100 (153)
5 2pbt_A AP4A hydrolase; nudix p 99.7 3E-16 1E-20 119.8 9.5 92 131-240 1-93 (134)
6 3hhj_A Mutator MUTT protein; n 99.7 4.3E-16 1.5E-20 123.7 10.5 91 131-235 26-116 (158)
7 3i7u_A AP4A hydrolase; nudix p 99.6 3E-16 1E-20 124.7 8.0 89 135-240 4-93 (134)
8 3eds_A MUTT/nudix family prote 99.6 1.3E-15 4.6E-20 121.3 11.0 92 134-239 21-114 (153)
9 3ees_A Probable pyrophosphohyd 99.6 7.9E-16 2.7E-20 119.5 9.2 88 136-239 23-111 (153)
10 3q93_A 7,8-dihydro-8-oxoguanin 99.6 1E-15 3.5E-20 126.1 9.5 100 126-240 16-116 (176)
11 3exq_A Nudix family hydrolase; 99.6 6.5E-15 2.2E-19 118.5 13.5 92 134-240 10-103 (161)
12 2b0v_A Nudix hydrolase; struct 99.6 1.3E-15 4.5E-20 119.0 9.0 86 135-235 8-93 (153)
13 2rrk_A ORF135, CTP pyrophospho 99.6 9.4E-16 3.2E-20 117.8 8.0 88 131-235 6-93 (140)
14 3gg6_A Nudix motif 18, nucleos 99.6 2.2E-15 7.4E-20 119.1 8.6 63 132-197 18-80 (156)
15 1x51_A A/G-specific adenine DN 99.6 3.3E-15 1.1E-19 118.6 9.7 94 130-239 15-114 (155)
16 3id9_A MUTT/nudix family prote 99.6 5.2E-15 1.8E-19 118.9 10.8 58 134-196 22-79 (171)
17 4dyw_A MUTT/nudix family prote 99.6 5.3E-15 1.8E-19 118.6 10.5 91 135-240 29-120 (157)
18 1sjy_A MUTT/nudix family prote 99.6 6E-15 2E-19 115.9 10.2 88 135-235 14-102 (159)
19 3oga_A Nucleoside triphosphata 99.6 7.8E-15 2.7E-19 117.2 10.9 66 129-196 23-88 (165)
20 3fsp_A A/G-specific adenine gl 99.6 5.3E-15 1.8E-19 136.8 10.2 91 130-237 236-326 (369)
21 3shd_A Phosphatase NUDJ; nudix 99.6 1.1E-14 3.7E-19 114.4 10.4 85 135-236 5-89 (153)
22 1rya_A GDP-mannose mannosyl hy 99.6 6.5E-15 2.2E-19 115.8 8.7 58 135-195 19-76 (160)
23 1vcd_A NDX1; nudix protein, di 99.6 1.6E-14 5.4E-19 109.5 9.4 79 136-235 4-82 (126)
24 1q27_A Putative nudix hydrolas 99.6 4E-14 1.4E-18 113.7 12.3 61 136-197 36-97 (171)
25 2yyh_A MUTT domain, 8-OXO-DGTP 99.6 3.7E-14 1.3E-18 110.0 11.6 87 137-240 12-102 (139)
26 3f13_A Putative nudix hydrolas 99.6 1.6E-14 5.6E-19 118.9 10.0 83 132-240 14-96 (163)
27 3f6a_A Hydrolase, nudix family 99.5 3.1E-14 1.1E-18 113.4 10.5 54 136-196 8-61 (159)
28 2pqv_A MUTT/nudix family prote 99.5 2.5E-14 8.5E-19 112.8 9.0 56 133-196 17-72 (154)
29 1ktg_A Diadenosine tetraphosph 99.5 2.8E-14 9.5E-19 109.7 8.7 88 135-237 4-94 (138)
30 2fkb_A Putative nudix hydrolas 99.5 3.9E-14 1.3E-18 114.6 10.0 58 136-195 39-98 (180)
31 3fk9_A Mutator MUTT protein; s 99.5 3.1E-14 1.1E-18 118.8 9.3 59 134-199 4-62 (188)
32 2o1c_A DATP pyrophosphohydrola 99.5 6.5E-14 2.2E-18 108.0 10.2 94 136-236 11-108 (150)
33 3son_A Hypothetical nudix hydr 99.5 6.8E-14 2.3E-18 109.7 9.2 91 134-236 8-98 (149)
34 3h95_A Nucleoside diphosphate- 99.5 6.8E-14 2.3E-18 116.9 9.6 61 132-196 25-85 (199)
35 1hzt_A Isopentenyl diphosphate 99.5 3.7E-14 1.3E-18 116.9 7.8 94 136-239 34-129 (190)
36 2w4e_A MUTT/nudix family prote 99.5 6.8E-14 2.3E-18 110.8 8.9 59 135-195 6-64 (145)
37 3cng_A Nudix hydrolase; struct 99.5 1.1E-13 3.9E-18 114.7 9.6 80 136-235 42-121 (189)
38 2b06_A MUTT/nudix family prote 99.5 1.8E-13 6.2E-18 107.6 9.5 88 135-240 8-101 (155)
39 2yvp_A NDX2, MUTT/nudix family 99.5 8.3E-14 2.8E-18 113.5 7.5 59 135-195 42-100 (182)
40 3o8s_A Nudix hydrolase, ADP-ri 99.5 1.5E-13 5E-18 116.3 9.1 85 139-240 75-160 (206)
41 3q1p_A Phosphohydrolase (MUTT/ 99.4 2.6E-13 8.8E-18 114.7 9.7 88 137-240 71-159 (205)
42 1f3y_A Diadenosine 5',5'''-P1, 99.4 5.4E-14 1.9E-18 110.4 5.2 55 136-195 16-70 (165)
43 1k2e_A Nudix homolog; nudix/MU 99.4 5.4E-14 1.9E-18 112.3 5.2 54 136-196 3-56 (156)
44 2kdv_A RNA pyrophosphohydrolas 99.4 4.6E-13 1.6E-17 109.1 10.7 55 136-196 10-64 (164)
45 2jvb_A Protein PSU1, mRNA-deca 99.4 7E-14 2.4E-18 109.0 4.7 58 132-195 2-60 (146)
46 2qjt_B Nicotinamide-nucleotide 99.4 3.4E-13 1.2E-17 120.2 9.2 60 133-195 206-265 (352)
47 1v8y_A ADP-ribose pyrophosphat 99.4 8.3E-13 2.8E-17 106.8 9.7 56 136-195 36-91 (170)
48 3u53_A BIS(5'-nucleosyl)-tetra 99.4 5.2E-13 1.8E-17 106.5 8.3 49 143-196 21-69 (155)
49 2qjo_A Bifunctional NMN adenyl 99.4 4.1E-13 1.4E-17 118.7 7.4 62 132-196 200-261 (341)
50 2fvv_A Diphosphoinositol polyp 99.4 3.4E-13 1.2E-17 114.0 6.6 58 134-196 41-99 (194)
51 1nqz_A COA pyrophosphatase (MU 99.4 1E-12 3.6E-17 108.2 9.2 61 136-197 36-98 (194)
52 3e57_A Uncharacterized protein 99.4 2E-13 6.8E-18 120.3 5.0 59 136-196 69-137 (211)
53 1mk1_A ADPR pyrophosphatase; n 99.4 3.8E-13 1.3E-17 113.6 6.3 89 135-239 44-134 (207)
54 3i9x_A MUTT/nudix family prote 99.4 4.1E-12 1.4E-16 104.7 11.3 66 132-197 28-101 (187)
55 2azw_A MUTT/nudix family prote 99.4 7.7E-13 2.6E-17 102.4 6.2 53 137-196 21-74 (148)
56 1vk6_A NADH pyrophosphatase; 1 99.3 1.4E-12 4.9E-17 117.2 8.3 99 80-195 95-196 (269)
57 3fcm_A Hydrolase, nudix family 99.3 6.6E-13 2.2E-17 110.5 5.6 80 107-193 19-99 (197)
58 2fb1_A Conserved hypothetical 99.3 4.6E-12 1.6E-16 109.6 10.9 50 143-195 25-74 (226)
59 1vhz_A ADP compounds hydrolase 99.3 2.5E-12 8.6E-17 108.6 7.7 52 141-195 56-107 (198)
60 1g0s_A Hypothetical 23.7 kDa p 99.3 5.4E-12 1.8E-16 107.3 9.0 86 136-235 59-148 (209)
61 2a6t_A SPAC19A8.12; alpha/beta 99.3 2.1E-12 7.3E-17 115.5 5.8 58 133-195 100-158 (271)
62 1u20_A U8 snoRNA-binding prote 99.3 2.4E-12 8.3E-17 109.9 5.0 82 137-235 47-129 (212)
63 2fml_A MUTT/nudix family prote 99.3 4E-11 1.4E-15 106.6 12.1 49 145-196 55-103 (273)
64 2dsc_A ADP-sugar pyrophosphata 99.2 3.2E-11 1.1E-15 102.1 9.9 48 146-195 77-124 (212)
65 3gz5_A MUTT/nudix family prote 99.2 4.1E-11 1.4E-15 104.7 10.1 52 142-196 33-86 (240)
66 3kvh_A Protein syndesmos; NUDT 99.2 3.8E-12 1.3E-16 113.8 1.3 70 159-243 50-122 (214)
67 3q91_A Uridine diphosphate glu 99.1 1.2E-10 4E-15 101.6 8.3 63 162-236 94-157 (218)
68 3o6z_A GDP-mannose pyrophospha 99.1 1E-10 3.5E-15 97.7 7.4 58 137-195 48-110 (191)
69 2dho_A Isopentenyl-diphosphate 99.0 7.2E-10 2.4E-14 97.3 9.1 58 137-195 62-129 (235)
70 3fjy_A Probable MUTT1 protein; 99.0 3.2E-10 1.1E-14 103.3 7.1 48 144-197 36-83 (364)
71 3bho_A Cleavage and polyadenyl 99.0 3.3E-10 1.1E-14 101.0 6.7 52 134-192 59-112 (208)
72 2xsq_A U8 snoRNA-decapping enz 99.0 2.9E-10 9.8E-15 98.8 4.7 43 147-196 66-109 (217)
73 2pny_A Isopentenyl-diphosphate 98.9 5E-09 1.7E-13 92.8 10.6 58 137-195 73-140 (246)
74 1q33_A Pyrophosphatase, ADP-ri 98.7 1.2E-08 4E-13 92.2 6.7 42 147-194 140-181 (292)
75 3qsj_A Nudix hydrolase; struct 98.7 1.2E-08 4.1E-13 90.4 4.9 47 147-195 25-92 (232)
76 3dup_A MUTT/nudix family prote 98.3 5.4E-07 1.9E-11 83.0 6.3 61 131-195 118-182 (300)
77 3rh7_A Hypothetical oxidoreduc 98.1 2.8E-06 9.6E-11 78.6 6.3 86 136-248 184-271 (321)
78 4hde_A SCO1/SENC family lipopr 24.2 1.1E+02 0.0039 24.0 5.0 65 80-149 81-147 (170)
79 1rij_A E6APN1 peptide; Trp-CAG 20.1 32 0.0011 21.4 0.7 13 84-96 5-17 (26)
No 1
>3gwy_A Putative CTP pyrophosphohydrolase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Bacteroides fragilis} SCOP: d.113.1.0
Probab=99.69 E-value=8.8e-17 Score=125.39 Aligned_cols=93 Identities=16% Similarity=0.180 Sum_probs=67.7
Q ss_pred eeEEEEEEEEEEecCCcEEEEeecccCCCc--ccccCCCCCcccCCCCCHHHHHHHHHHHHhCccccCCceEEeeCCCcc
Q 048617 131 VRTVNVVTVRIIGKDNQILVESHQELSDGS--VRNRCRPLAEKMKSNETPEEAVIRAVKEELGSILNDSITVRIVPGSYS 208 (281)
Q Consensus 131 ~R~V~Vvva~I~~~~GriLIe~RqefpgG~--vR~RWEfPGGKvepGEt~eeAl~REi~EELGi~v~~~~~V~Vl~gsy~ 208 (281)
++.+.+|+++|.+ +|+||+.+|. .++. ..+.|.||||++++|||+++|+.||++||+|+.+.....+
T Consensus 3 ~~~~~~v~~vi~~-~~~vLL~~r~--~~~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EE~Gl~~~~~~~~-------- 71 (140)
T 3gwy_A 3 LKSIEVVAAVIRL-GEKYLCVQRG--QTKFSYTSFRYEFPGGKVEEGESLQEALQREIMEEMDYVIEVGEKL-------- 71 (140)
T ss_dssp CSCEEEEEEEEEE-TTEEEEEEC-----------CCEECSEEECCTTCCHHHHHHHHHHHHHCCCEEEEEEE--------
T ss_pred ceEEEEEEEEEEe-CCEEEEEEec--CCCCCCCCCeEECCCccCCCCCCHHHHHHHHHHHhhCcEEEeceEE--------
Confidence 4567788888877 8899999997 4454 6789999999999999999999999999999998733221
Q ss_pred cccccccCCCCCCCccEEEEEEEEEEe-cCCCC
Q 048617 209 KKLDERNSLSYPGLPARYVLHSVDAFV-DGLPE 240 (281)
Q Consensus 209 ~~~e~r~S~SYPGL~vryvLh~v~a~V-~GlPe 240 (281)
....+.|++.. +.++.|.|.+ .|.|.
T Consensus 72 ----~~~~~~~~~~~--~~~~~f~~~~~~~~~~ 98 (140)
T 3gwy_A 72 ----LTVHHTYPDFE--ITMHAFLCHPVGQRYV 98 (140)
T ss_dssp ----EEEECCCSSCC--EEEEEEEEEECCSCCC
T ss_pred ----EEEEEEeCCce--EEEEEEEEEecCCccc
Confidence 12345677665 7788888876 44443
No 2
>1mut_A MUTT, nucleoside triphosphate pyrophosphohydrolase; DNA repair; NMR {Escherichia coli} SCOP: d.113.1.1 PDB: 1ppx_A* 1pun_A* 1puq_A* 1pus_A* 1tum_A* 3a6s_A* 3a6t_A* 3a6u_A* 3a6v_A*
Probab=99.68 E-value=4.2e-17 Score=123.44 Aligned_cols=88 Identities=22% Similarity=0.299 Sum_probs=69.9
Q ss_pred eEEEEEEEEEEecCCcEEEEeecccCCCcccccCCCCCcccCCCCCHHHHHHHHHHHHhCccccCCceEEeeCCCccccc
Q 048617 132 RTVNVVTVRIIGKDNQILVESHQELSDGSVRNRCRPLAEKMKSNETPEEAVIRAVKEELGSILNDSITVRIVPGSYSKKL 211 (281)
Q Consensus 132 R~V~Vvva~I~~~~GriLIe~RqefpgG~vR~RWEfPGGKvepGEt~eeAl~REi~EELGi~v~~~~~V~Vl~gsy~~~~ 211 (281)
+.+++++++|++++|++|+.+|. .++..++.|.||||++++|||+++|+.||++||+|+.+... ..
T Consensus 2 ~~~~~~~~ii~~~~~~vLl~~r~--~~~~~~g~w~~PgG~~e~gE~~~~aa~RE~~EE~G~~~~~~---~~--------- 67 (129)
T 1mut_A 2 KKLQIAVGIIRNENNEIFITRRA--ADAHMANKLEFPGGKIEMGETPEQAVVRELQEEVGITPQHF---SL--------- 67 (129)
T ss_dssp CEEECCCEECEETTTEEEEEECS--SCCSSSCCEECCCCCSSSCSSTTHHHHHHHHTTTCCSSCEE---CC---------
T ss_pred CeEEEEEEEEEecCCEEEEEEeC--CCCCCCCeEECCccCcCCCCCHHHHHHHHHHHHhCCccccc---eE---------
Confidence 45788889899999999999887 55667899999999999999999999999999999997621 11
Q ss_pred ccccCCCCCCCccEEEEEEEEEEe
Q 048617 212 DERNSLSYPGLPARYVLHSVDAFV 235 (281)
Q Consensus 212 e~r~S~SYPGL~vryvLh~v~a~V 235 (281)
+....+.|++.. +.++.|.|.+
T Consensus 68 ~~~~~~~~~~~~--~~~~~~~~~~ 89 (129)
T 1mut_A 68 FEKLEYEFPDRH--ITLWFWLVER 89 (129)
T ss_dssp CCCCBCCCSSCE--EECCCEEEEE
T ss_pred EEEEEEecCCce--EEEEEEEEEc
Confidence 223346677654 6667777775
No 3
>3r03_A Nudix hydrolase; structural genomics, PSI2, protein structure INIT NEW YORK SGX research center for structural genomics, nysgx; HET: ADP; 2.49A {Rhodospirillum rubrum} SCOP: d.113.1.0
Probab=99.67 E-value=2e-16 Score=122.54 Aligned_cols=96 Identities=22% Similarity=0.266 Sum_probs=72.7
Q ss_pred CeeEEEEEEEEEEecCCcEEEEeecccCCCcccccCCCCCcccCCCCCHHHHHHHHHHHHhCccccCCceEEeeCCCccc
Q 048617 130 PVRTVNVVTVRIIGKDNQILVESHQELSDGSVRNRCRPLAEKMKSNETPEEAVIRAVKEELGSILNDSITVRIVPGSYSK 209 (281)
Q Consensus 130 p~R~V~Vvva~I~~~~GriLIe~RqefpgG~vR~RWEfPGGKvepGEt~eeAl~REi~EELGi~v~~~~~V~Vl~gsy~~ 209 (281)
..+.+.+++++|++.+|+||+.+|. .++..++.|.||||++++|||+++|+.||++||+|+.+....-..+
T Consensus 4 ~~~~~~~~~~vi~~~~~~vLl~~r~--~~~~~~g~w~lPgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~~~------- 74 (144)
T 3r03_A 4 GLPILLVTAAALIDPDGRVLLAQRP--PGKSLAGLWEFPGGKLEPGETPEAALVRELAEELGVDTRASCLAPL------- 74 (144)
T ss_dssp --CEEEEEEEEEBCTTSCEEEEECC--TTSSSTTCEECSEEECCTTCCHHHHHHHHHHHHHCCBCCGGGCEEE-------
T ss_pred CCceeEEEEEEEEcCCCEEEEEEeC--CCCCCCCcEECCCcEecCCCCHHHHHHHHHHHHhCceeeccceEEE-------
Confidence 3556778888899999999999987 5566788999999999999999999999999999999874321111
Q ss_pred ccccccCCCCCCCccEEEEEEEEEEe-cCCC
Q 048617 210 KLDERNSLSYPGLPARYVLHSVDAFV-DGLP 239 (281)
Q Consensus 210 ~~e~r~S~SYPGL~vryvLh~v~a~V-~GlP 239 (281)
....+.|++.. +.++.|.|.+ .|.+
T Consensus 75 ---~~~~~~~~~~~--~~~~~~~~~~~~~~~ 100 (144)
T 3r03_A 75 ---AFASHSYDTFH--LLMPLYACRSWRGRA 100 (144)
T ss_dssp ---EEEEEECSSSE--EEEEEEEECCCBSCC
T ss_pred ---EeeeccCCCeE--EEEEEEEEEecCCcc
Confidence 12345566554 7778888865 4433
No 4
>3grn_A MUTT related protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 1.70A {Methanosarcina mazei}
Probab=99.66 E-value=9.5e-16 Score=121.14 Aligned_cols=93 Identities=15% Similarity=0.088 Sum_probs=69.0
Q ss_pred EEEEEEEEEEecCCcEEEEeecccCCCcccccCCCCCcccCCCCCHHHHHHHHHHHHhCccccCCceEEeeCCCcccccc
Q 048617 133 TVNVVTVRIIGKDNQILVESHQELSDGSVRNRCRPLAEKMKSNETPEEAVIRAVKEELGSILNDSITVRIVPGSYSKKLD 212 (281)
Q Consensus 133 ~V~Vvva~I~~~~GriLIe~RqefpgG~vR~RWEfPGGKvepGEt~eeAl~REi~EELGi~v~~~~~V~Vl~gsy~~~~e 212 (281)
...+|+++|.+.+|+||+.+|.. .++..++.|.||||++++|||+++|+.||++||+|+.+.....+.
T Consensus 7 ~~~~v~~vi~~~~~~vLL~~r~~-~~~~~~g~w~~PgG~ve~gE~~~~aa~REl~EE~Gl~~~~~~~~~----------- 74 (153)
T 3grn_A 7 YIISVYALIRNEKGEFLLLRRSE-NSRTNAGKWDLPGGKVNPDESLKEGVAREVWEETGITMVPGDIAG----------- 74 (153)
T ss_dssp EEEEEEEEEECTTCCEEEEEECT-TCSSSTTCEECSEEECCTTCCHHHHHHHHHHHHHCCCCCCCSEEE-----------
T ss_pred eEEEEEEEEEcCCCcEEEEEEcC-CCCCCCCeEECceeecCCCCCHHHHHHhhhhhhhCcEeecceEEE-----------
Confidence 34455566778899999999972 125678899999999999999999999999999999987543322
Q ss_pred cccCCCCCCCccEEEEEEEEEEe-cCCCC
Q 048617 213 ERNSLSYPGLPARYVLHSVDAFV-DGLPE 240 (281)
Q Consensus 213 ~r~S~SYPGL~vryvLh~v~a~V-~GlPe 240 (281)
...+.|++.. ..++.|.|.+ .|.+.
T Consensus 75 -~~~~~~~~~~--~~~~~~~~~~~~~~~~ 100 (153)
T 3grn_A 75 -QVNFELTEKK--VIAIVFDGGYVVADVK 100 (153)
T ss_dssp -EEEEECSSCE--EEEEEEEEEECCCCCC
T ss_pred -EEEEecCCce--EEEEEEEEEecCCcEe
Confidence 2225567654 6677777764 55443
No 5
>2pbt_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, structural genomics, NPPSFA; HET: PGE; 1.80A {Aquifex aeolicus} PDB: 2pq1_A* 3i7u_A* 3i7v_A*
Probab=99.66 E-value=3e-16 Score=119.78 Aligned_cols=92 Identities=16% Similarity=0.099 Sum_probs=66.2
Q ss_pred eeEEEEEEEEEEecCCcEEEEeecccCCCcccccCCCCCcccCCCCCHHHHHHHHHHHHhCccccCCceEEeeCCCcccc
Q 048617 131 VRTVNVVTVRIIGKDNQILVESHQELSDGSVRNRCRPLAEKMKSNETPEEAVIRAVKEELGSILNDSITVRIVPGSYSKK 210 (281)
Q Consensus 131 ~R~V~Vvva~I~~~~GriLIe~RqefpgG~vR~RWEfPGGKvepGEt~eeAl~REi~EELGi~v~~~~~V~Vl~gsy~~~ 210 (281)
+|.+.+|+|+|.+ +|++|+.+|.. +.|.||||++++|||+++|+.||++||+|+.+.....+....
T Consensus 1 m~~~~~~~~vi~~-~~~vLl~~r~~-------~~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~~~~~------ 66 (134)
T 2pbt_A 1 MKKEFSAGGVLFK-DGEVLLIKTPS-------NVWSFPKGNIEPGEKPEETAVREVWEETGVKGEILDYIGEIH------ 66 (134)
T ss_dssp CEEEEEEEEEEEE-TTEEEEEECTT-------SCEECCEEECCTTCCHHHHHHHHHHHHHSEEEEEEEEEEEEE------
T ss_pred CccceEEEEEEEE-CCEEEEEEeCC-------CcEECCccccCCCCCHHHHHHHHHHHHHCCccEEeeeeeEEE------
Confidence 4667777777777 67999998862 789999999999999999999999999999987432221111
Q ss_pred cccccCCCCCCCccEEEEEEEEEEe-cCCCC
Q 048617 211 LDERNSLSYPGLPARYVLHSVDAFV-DGLPE 240 (281)
Q Consensus 211 ~e~r~S~SYPGL~vryvLh~v~a~V-~GlPe 240 (281)
...+.+|......++.|.|.+ .|.+.
T Consensus 67 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (134)
T 2pbt_A 67 ----YWYTLKGERIFKTVKYYLMKYKEGEPR 93 (134)
T ss_dssp ----EEEEETTEEEEEEEEEEEEEEEEECCC
T ss_pred ----EEeeCCCcEEEEEEEEEEEEecCCCcC
Confidence 112223444456777888876 45444
No 6
>3hhj_A Mutator MUTT protein; niaid, ssgcid, decode, UW, SBRI, infectious diseases, hydrol structural genomics; 2.10A {Bartonella henselae}
Probab=99.66 E-value=4.3e-16 Score=123.70 Aligned_cols=91 Identities=21% Similarity=0.269 Sum_probs=71.3
Q ss_pred eeEEEEEEEEEEecCCcEEEEeecccCCCcccccCCCCCcccCCCCCHHHHHHHHHHHHhCccccCCceEEeeCCCcccc
Q 048617 131 VRTVNVVTVRIIGKDNQILVESHQELSDGSVRNRCRPLAEKMKSNETPEEAVIRAVKEELGSILNDSITVRIVPGSYSKK 210 (281)
Q Consensus 131 ~R~V~Vvva~I~~~~GriLIe~RqefpgG~vR~RWEfPGGKvepGEt~eeAl~REi~EELGi~v~~~~~V~Vl~gsy~~~ 210 (281)
.+.+.+++++|++.+|+||+.+|. .++...+.|.||||++++|||+++|+.||++||+|+.+....-..+
T Consensus 26 ~~~~~~~~~~i~~~~~~vLL~~r~--~~~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~-------- 95 (158)
T 3hhj_A 26 SSLLIVVACALLDQDNRVLLTQRP--EGKSLAGLWEFPGGKVEQGETPEASLIRELEEELGVHVQADNLFPL-------- 95 (158)
T ss_dssp -CEEEEEEEEEBCTTSEEEEEECC--CTTSCCCCCBCCEEECCTTCCHHHHHHHHHHHHHCCBCCGGGCEEE--------
T ss_pred CceEEEEEEEEEeCCCEEEEEEeC--CCCCCCCEEECCceeecCCCCHHHHHHHHHHHHhCcEeecceEEEE--------
Confidence 445778888899999999999987 5666789999999999999999999999999999999874322111
Q ss_pred cccccCCCCCCCccEEEEEEEEEEe
Q 048617 211 LDERNSLSYPGLPARYVLHSVDAFV 235 (281)
Q Consensus 211 ~e~r~S~SYPGL~vryvLh~v~a~V 235 (281)
....+.|++.. +.++.|.|.+
T Consensus 96 --~~~~~~~~~~~--~~~~~~~~~~ 116 (158)
T 3hhj_A 96 --TFASHGYETFH--LLMPLYFCSH 116 (158)
T ss_dssp --EEEEEECSSCE--EEEEEEEESC
T ss_pred --EEEeeccCCcE--EEEEEEEEEE
Confidence 12336677665 7777888865
No 7
>3i7u_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, S genomics, NPPSFA, national project on protein structural AN functional analyses; HET: PGE PG4; 1.80A {Aquifex aeolicus} PDB: 3i7v_A*
Probab=99.64 E-value=3e-16 Score=124.68 Aligned_cols=89 Identities=18% Similarity=0.127 Sum_probs=63.2
Q ss_pred EEEEEEEEecCCcEEEEeecccCCCcccccCCCCCcccCCCCCHHHHHHHHHHHHhCccccCCceEEeeCCCcccccccc
Q 048617 135 NVVTVRIIGKDNQILVESHQELSDGSVRNRCRPLAEKMKSNETPEEAVIRAVKEELGSILNDSITVRIVPGSYSKKLDER 214 (281)
Q Consensus 135 ~Vvva~I~~~~GriLIe~RqefpgG~vR~RWEfPGGKvepGEt~eeAl~REi~EELGi~v~~~~~V~Vl~gsy~~~~e~r 214 (281)
+++|++|+..+|+||+-+|. ++.|.|||||+|+|||+++|+.||++||+|+.+.....+... .
T Consensus 4 ~~aag~vv~~~~~vLL~~r~-------~g~W~~PgG~ve~gEt~~~aa~RE~~EEtGl~~~~~~~l~~~----------~ 66 (134)
T 3i7u_A 4 EFSAGGVLFKDGEVLLIKTP-------SNVWSFPKGNIEPGEKPEETAVREVWEETGVKGEILDYIGEI----------H 66 (134)
T ss_dssp EEEEEEEEEETTEEEEEECT-------TSCEECCEEECCTTCCHHHHHHHHHHHHHSEEEEEEEEEEEE----------E
T ss_pred EEEEEEEEEECCEEEEEEeC-------CCcEECCeeEecCCCCHHHHHHHHHHHhcCceEEEeeeeeee----------e
Confidence 56777777778999998874 257999999999999999999999999999998743222111 1
Q ss_pred cCCCCCCCccEEEEEEEEEEe-cCCCC
Q 048617 215 NSLSYPGLPARYVLHSVDAFV-DGLPE 240 (281)
Q Consensus 215 ~S~SYPGL~vryvLh~v~a~V-~GlPe 240 (281)
....+.+-.....+|.|.|.+ +|.|.
T Consensus 67 ~~~~~~~~~~~~~~~~f~~~~~~~~~~ 93 (134)
T 3i7u_A 67 YWYTLKGERIFKTVKYYLMKYKEGEPR 93 (134)
T ss_dssp EEEEETTEEEEEEEEEEEEEEEEECCC
T ss_pred EEecCCCceEEEEEEEEEEEEcCCcCc
Confidence 112233333345567777775 66665
No 8
>3eds_A MUTT/nudix family protein; MUT/nudix protein, protein structure initiative II(PSI II), nysgxrc; 1.76A {Bacillus thuringiensis str} PDB: 3smd_A
Probab=99.64 E-value=1.3e-15 Score=121.26 Aligned_cols=92 Identities=24% Similarity=0.270 Sum_probs=63.7
Q ss_pred EEEEEEEEEecCCcEEEEeecccCCCcccccCCCCCcccCCCCCHHHHHHHHHHHHhCccccCCceEEeeCCCccccccc
Q 048617 134 VNVVTVRIIGKDNQILVESHQELSDGSVRNRCRPLAEKMKSNETPEEAVIRAVKEELGSILNDSITVRIVPGSYSKKLDE 213 (281)
Q Consensus 134 V~Vvva~I~~~~GriLIe~RqefpgG~vR~RWEfPGGKvepGEt~eeAl~REi~EELGi~v~~~~~V~Vl~gsy~~~~e~ 213 (281)
..+|+++|++.+|++|+.+|. ++.|.||||++++|||+++|++||++||+|+.+.....+.+... .
T Consensus 21 ~~~v~~ii~~~~~~vLL~~r~-------~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~-------~ 86 (153)
T 3eds_A 21 XPSVAAVIKNEQGEILFQYPG-------GEYWSLPAGAIELGETPEEAVVREVWEETGLKVQVKKQKGVFGG-------K 86 (153)
T ss_dssp EEEEEEEEBCTTCCEEEECC----------CBBCSEEECCTTSCHHHHHHHHHHHHHCEEEEEEEEEEEECS-------G
T ss_pred eeeEEEEEEcCCCeEEEEEcC-------CCcEECCccccCCCCCHHHHHHHHHHHHHCccceeeeEEEEecc-------c
Confidence 445666677889999998775 67899999999999999999999999999999874333222110 1
Q ss_pred ccCCCCCCCc-cEEEEEEEEEEe-cCCC
Q 048617 214 RNSLSYPGLP-ARYVLHSVDAFV-DGLP 239 (281)
Q Consensus 214 r~S~SYPGL~-vryvLh~v~a~V-~GlP 239 (281)
...+.|++-. ..+.++.|.|.+ .|.+
T Consensus 87 ~~~~~~~~~~~~~~~~~~f~~~~~~~~~ 114 (153)
T 3eds_A 87 EYRYTYSNGDEVEYIVVVFECEVTSGEL 114 (153)
T ss_dssp GGEEECTTSCEEEEEEEEEEEEEEEECC
T ss_pred ceeeecCCCCeEEEEEEEEEEEecCCcc
Confidence 1234566533 345777888876 4444
No 9
>3ees_A Probable pyrophosphohydrolase; nudix, RNA pyrophosphohydrolase; 1.90A {Bdellovibrio bacteriovorus} PDB: 3eeu_A 3ef5_A* 3ffu_A*
Probab=99.63 E-value=7.9e-16 Score=119.51 Aligned_cols=88 Identities=26% Similarity=0.330 Sum_probs=67.2
Q ss_pred EEEEEEEecCCcEEEEeecccCCCcccccCCCCCcccCCCCCHHHHHHHHHHHHhCccccCCceEEeeCCCccccccccc
Q 048617 136 VVTVRIIGKDNQILVESHQELSDGSVRNRCRPLAEKMKSNETPEEAVIRAVKEELGSILNDSITVRIVPGSYSKKLDERN 215 (281)
Q Consensus 136 Vvva~I~~~~GriLIe~RqefpgG~vR~RWEfPGGKvepGEt~eeAl~REi~EELGi~v~~~~~V~Vl~gsy~~~~e~r~ 215 (281)
+++++|++.+|++|+.+|. .++..++.|.||||++++|||+++|+.||++||+|+.+.....+. ..
T Consensus 23 ~~~~~i~~~~~~vLl~~r~--~~~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~~------------~~ 88 (153)
T 3ees_A 23 PVVAGFLRKDGKILVGQRP--ENNSLAGQWEFPGGKIENGETPEEALARELNEELGIEAEVGELKL------------AC 88 (153)
T ss_dssp EEEEEEEEETTEEEEEECC--TTSTTTTCEECSEEECCTTCCHHHHHHHHHHHHHSCEEECCCEEE------------EE
T ss_pred EEEEEEEEECCEEEEEEeC--CCCCCCCeEECCceeeCCCCCHHHHHHHHHHHHHCCccccCceEE------------EE
Confidence 4455566778999999997 556678999999999999999999999999999999987443221 23
Q ss_pred CCCCCCCccEEEEEEEEEEe-cCCC
Q 048617 216 SLSYPGLPARYVLHSVDAFV-DGLP 239 (281)
Q Consensus 216 S~SYPGL~vryvLh~v~a~V-~GlP 239 (281)
.+.|++.. +.++.|.|.+ .+.+
T Consensus 89 ~~~~~~~~--~~~~~~~~~~~~~~~ 111 (153)
T 3ees_A 89 THSYGDVG--ILILFYEILYWKGEP 111 (153)
T ss_dssp EEEETTEE--EEEEEEEECEEESCC
T ss_pred EEecCCCe--EEEEEEEEEECCCCc
Confidence 45677655 6677787775 4443
No 10
>3q93_A 7,8-dihydro-8-oxoguanine triphosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 1.80A {Homo sapiens} PDB: 1iry_A 3zr0_A* 3zr1_A
Probab=99.62 E-value=1e-15 Score=126.06 Aligned_cols=100 Identities=18% Similarity=0.232 Sum_probs=73.3
Q ss_pred cCCCCeeEEEEEEEEEEecCCcEEEEeecccCCCcccccCCCCCcccCCCCCHHHHHHHHHHHHhCccccCCceEEeeCC
Q 048617 126 DAIPPVRTVNVVTVRIIGKDNQILVESHQELSDGSVRNRCRPLAEKMKSNETPEEAVIRAVKEELGSILNDSITVRIVPG 205 (281)
Q Consensus 126 ds~~p~R~V~Vvva~I~~~~GriLIe~RqefpgG~vR~RWEfPGGKvepGEt~eeAl~REi~EELGi~v~~~~~V~Vl~g 205 (281)
++..|++.-++++++|++.+|+||+.+|+. +...+.|.||||++++|||+++|++||++||+|+.+.....+
T Consensus 16 ~~~~~m~~~~~~~~~vi~~~~~vLL~~r~~---~~~~g~W~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~l----- 87 (176)
T 3q93_A 16 PRGSHMGASRLYTLVLVLQPQRVLLGMKKR---GFGAGRWNGFGGKVQEGETIEDGARRELQEESGLTVDALHKV----- 87 (176)
T ss_dssp -------CEEEEEEEEEECSSEEEEEEECS---STTTTSEECEEEECCTTSCHHHHHHHHHHHHHSCEESCCEEE-----
T ss_pred cCCCcCCCCcEEEEEEEEeCCEEEEEEEcC---CCCCCeEECceecCCCCCCHHHHHHHHHHHHHCCcceeeEEE-----
Confidence 566778888899999999999999998852 335789999999999999999999999999999998743222
Q ss_pred CcccccccccCCCCCCCccEEEEEEEEEEe-cCCCC
Q 048617 206 SYSKKLDERNSLSYPGLPARYVLHSVDAFV-DGLPE 240 (281)
Q Consensus 206 sy~~~~e~r~S~SYPGL~vryvLh~v~a~V-~GlPe 240 (281)
....+.|++-...+.++.|.|.+ .|.+.
T Consensus 88 -------~~~~~~~~~~~~~~~~~~f~~~~~~~~~~ 116 (176)
T 3q93_A 88 -------GQIVFEFVGEPELMDVHVFCTDSIQGTPV 116 (176)
T ss_dssp -------EEEEEEETTCSCEEEEEEEEESCEESCCC
T ss_pred -------EEEEEEcCCCCcEEEEEEEEEECCCCCcC
Confidence 12334566655567888888874 66665
No 11
>3exq_A Nudix family hydrolase; protein structure initiative II(PSI II), NYSGXRC, 11180K, structural genomics; 2.00A {Lactobacillus brevis atcc 367}
Probab=99.62 E-value=6.5e-15 Score=118.48 Aligned_cols=92 Identities=18% Similarity=0.064 Sum_probs=65.8
Q ss_pred EEEEEEEEEecC-CcEEEEeecccCCCcccccCCCCCcccCCCCCHHHHHHHHHHHHhCccccCCceEEeeCCCcccccc
Q 048617 134 VNVVTVRIIGKD-NQILVESHQELSDGSVRNRCRPLAEKMKSNETPEEAVIRAVKEELGSILNDSITVRIVPGSYSKKLD 212 (281)
Q Consensus 134 V~Vvva~I~~~~-GriLIe~RqefpgG~vR~RWEfPGGKvepGEt~eeAl~REi~EELGi~v~~~~~V~Vl~gsy~~~~e 212 (281)
..+++|+|.+++ |+||+.+|. ++...+.|+||||++++|||+++|++||++||+|+.+.....+.+
T Consensus 10 ~~~v~~vi~~~~~~~vLL~~r~---~~~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~---------- 76 (161)
T 3exq_A 10 ELVTMVMVTDPETQRVLVEDKV---NVPWKAGHSFPGGHVEVGEPCATAAIREVFEETGLRLSGVTFCGT---------- 76 (161)
T ss_dssp EEEEEEEEBCTTTCCEEEECCC---CCTTTCSBBCCCCBCCTTSCHHHHHHHHHHHHHCCEESCCEEEEE----------
T ss_pred eEEEEEEEEeCCCCEEEEEEcc---CCCCCCCEEccceecCCCCCHHHHHHHHHHHhhCcEecCCcEEEE----------
Confidence 344555566666 699999886 455666799999999999999999999999999999875433221
Q ss_pred cccCCCCCCCccEEEEEEEEEEe-cCCCC
Q 048617 213 ERNSLSYPGLPARYVLHSVDAFV-DGLPE 240 (281)
Q Consensus 213 ~r~S~SYPGL~vryvLh~v~a~V-~GlPe 240 (281)
..+.+++-...+.++.+.|.+ .|.|.
T Consensus 77 --~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (161)
T 3exq_A 77 --CEWFDDDRQHRKLGLLYRASNFTGTLK 103 (161)
T ss_dssp --EEEECSSCSSEEEEEEEEECCEESCCC
T ss_pred --EecccCCCCeEEEEEEEEEeccCCccC
Confidence 223343333457888888874 55544
No 12
>2b0v_A Nudix hydrolase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 1.55A {Nitrosomonas europaea} SCOP: d.113.1.1
Probab=99.62 E-value=1.3e-15 Score=118.99 Aligned_cols=86 Identities=19% Similarity=0.223 Sum_probs=64.2
Q ss_pred EEEEEEEEecCCcEEEEeecccCCCcccccCCCCCcccCCCCCHHHHHHHHHHHHhCccccCCceEEeeCCCcccccccc
Q 048617 135 NVVTVRIIGKDNQILVESHQELSDGSVRNRCRPLAEKMKSNETPEEAVIRAVKEELGSILNDSITVRIVPGSYSKKLDER 214 (281)
Q Consensus 135 ~Vvva~I~~~~GriLIe~RqefpgG~vR~RWEfPGGKvepGEt~eeAl~REi~EELGi~v~~~~~V~Vl~gsy~~~~e~r 214 (281)
++++++|++++|++|+.+|. .++. ++.|.+|||++++|||+++|+.||++||+|+.+.....+. .
T Consensus 8 ~~~v~~ii~~~~~vLl~~r~--~~~~-~~~w~lPgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~------------~ 72 (153)
T 2b0v_A 8 NVTVAAVIEQDDKYLLVEEI--PRGT-AIKLNQPAGHLEPGESIIQACSREVLEETGHSFLPEVLTG------------I 72 (153)
T ss_dssp EEEEEEECEETTEEEEEEEC--SSSS-CCEEECSEEECCTTSCHHHHHHHHHHHHHSEEEEEEEEEE------------E
T ss_pred CEEEEEEEeeCCEEEEEEEc--CCCC-CCeEECCCcCcCCCCCHHHHHHHHHHHhhCcEeccceEEE------------E
Confidence 56666677788999999886 4555 7899999999999999999999999999999987332211 1
Q ss_pred cCCCCCCCccEEEEEEEEEEe
Q 048617 215 NSLSYPGLPARYVLHSVDAFV 235 (281)
Q Consensus 215 ~S~SYPGL~vryvLh~v~a~V 235 (281)
..+.+|+-...+..+.|.|.+
T Consensus 73 ~~~~~~~~~~~~~~~~f~~~~ 93 (153)
T 2b0v_A 73 YHWTCASNGTTYLRFTFSGQV 93 (153)
T ss_dssp EEEEETTTTEEEEEEEEEEEE
T ss_pred EEEeCCCCCcEEEEEEEEEEe
Confidence 123455433446677777876
No 13
>2rrk_A ORF135, CTP pyrophosphohydrolase; NMR {Escherichia coli}
Probab=99.62 E-value=9.4e-16 Score=117.83 Aligned_cols=88 Identities=20% Similarity=0.266 Sum_probs=66.7
Q ss_pred eeEEEEEEEEEEecCCcEEEEeecccCCCcccccCCCCCcccCCCCCHHHHHHHHHHHHhCccccCCceEEeeCCCcccc
Q 048617 131 VRTVNVVTVRIIGKDNQILVESHQELSDGSVRNRCRPLAEKMKSNETPEEAVIRAVKEELGSILNDSITVRIVPGSYSKK 210 (281)
Q Consensus 131 ~R~V~Vvva~I~~~~GriLIe~RqefpgG~vR~RWEfPGGKvepGEt~eeAl~REi~EELGi~v~~~~~V~Vl~gsy~~~ 210 (281)
++.+++++++| +.+|++|+.+|. .++...+.|+||||++++|||+++|+.||++||+|+.+.....+
T Consensus 6 ~~~~~~~~~ii-~~~~~vLl~~r~--~~~~~~g~w~lPgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~---------- 72 (140)
T 2rrk_A 6 MKMIEVVAAII-ERDGKILLAQRP--AQSDQAGLWEFAGGKVEPDESQRQALVRELREELGIEATVGEYV---------- 72 (140)
T ss_dssp SCEEEEEEEEE-EETTEEEEEECC--SSCSCCCCEECCEEECCTTSCHHHHHHHHHHHHSCEEEECCEEE----------
T ss_pred CccceEEEEEE-EcCCEEEEEEcC--CCCCCCCEEECCceecCCCCCHHHHHHHHHHHHHCCeeecccEE----------
Confidence 45566776666 788899999886 45556789999999999999999999999999999998643222
Q ss_pred cccccCCCCCCCccEEEEEEEEEEe
Q 048617 211 LDERNSLSYPGLPARYVLHSVDAFV 235 (281)
Q Consensus 211 ~e~r~S~SYPGL~vryvLh~v~a~V 235 (281)
....+.|++.. +.++.|.|.+
T Consensus 73 --~~~~~~~~~~~--~~~~~~~~~~ 93 (140)
T 2rrk_A 73 --ASHQREVSGRI--IHLHAWHVPD 93 (140)
T ss_dssp --EEEEEEETTEE--EEEEEEEESE
T ss_pred --EEEEEecCCcE--EEEEEEEEEe
Confidence 12235566544 6677777765
No 14
>3gg6_A Nudix motif 18, nucleoside diphosphate-linked moiety X motif 18; NUDT18, NXR1, nucleotide hydrolase, hydrolase, structural genomics; 2.10A {Homo sapiens}
Probab=99.60 E-value=2.2e-15 Score=119.11 Aligned_cols=63 Identities=25% Similarity=0.279 Sum_probs=54.1
Q ss_pred eEEEEEEEEEEecCCcEEEEeecccCCCcccccCCCCCcccCCCCCHHHHHHHHHHHHhCccccCC
Q 048617 132 RTVNVVTVRIIGKDNQILVESHQELSDGSVRNRCRPLAEKMKSNETPEEAVIRAVKEELGSILNDS 197 (281)
Q Consensus 132 R~V~Vvva~I~~~~GriLIe~RqefpgG~vR~RWEfPGGKvepGEt~eeAl~REi~EELGi~v~~~ 197 (281)
+..++|+++|++.+|++|+.+|. .++ ..+.|.+|||++++|||+++|++||++||+|+.+...
T Consensus 18 ~~~~~v~~~i~~~~~~vLl~~r~--~~~-~~~~w~~PgG~ve~gE~~~~aa~REl~EEtGl~~~~~ 80 (156)
T 3gg6_A 18 NVCYVVLAVFLSEQDEVLLIQEA--KRE-CRGSWYLPAGRMEPGETIVEALQREVKEEAGLHCEPE 80 (156)
T ss_dssp TCEEEEEEECBCTTSEEEEEECC--CTT-STTCEECSEEECCTTCCHHHHHHHHHHHHHCEEEEEE
T ss_pred ceEEEEEEEEEeCCCEEEEEEec--CCC-CCCEEECCeeeccCCCCHHHHHHHHHHHhhCceeEee
Confidence 34678888888999999999886 222 5689999999999999999999999999999998743
No 15
>1x51_A A/G-specific adenine DNA glycosylase; nudix domain, DNA repair, alpha-3 isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.113.1.3
Probab=99.60 E-value=3.3e-15 Score=118.58 Aligned_cols=94 Identities=12% Similarity=0.100 Sum_probs=70.5
Q ss_pred CeeEEEEEEEEEEec---CCcEEEEeecccCCCcccccCCCCCcccCCCCCHH-HHHHHHHHHHhC-ccccCCceEEeeC
Q 048617 130 PVRTVNVVTVRIIGK---DNQILVESHQELSDGSVRNRCRPLAEKMKSNETPE-EAVIRAVKEELG-SILNDSITVRIVP 204 (281)
Q Consensus 130 p~R~V~Vvva~I~~~---~GriLIe~RqefpgG~vR~RWEfPGGKvepGEt~e-eAl~REi~EELG-i~v~~~~~V~Vl~ 204 (281)
+.+..+.++++|.+. +|+||+.+|. .+|...+.|+||||++++||+++ +|+.||++||+| +.+.... .
T Consensus 15 ~~~~~~~~~~vi~~~~~~~~~vLl~~R~--~~~~~~g~w~~PgG~~e~gE~~~~~a~~REl~EE~g~l~~~~~~---~-- 87 (155)
T 1x51_A 15 PPREESSATCVLEQPGALGAQILLVQRP--NSGLLAGLWEFPSVTWEPSEQLQRKALLQELQRWAGPLPATHLR---H-- 87 (155)
T ss_dssp CTTEEEEEEEEEEEECSSSEEEEEEECC--CCSTTCSCEECCEEECCSSHHHHHHHHHHHHHHHSCCCCSTTCE---E--
T ss_pred CCCeEEEEEEEEEecCCCCCEEEEEECC--CCCCCCceecCCccccCCCCCHHHHHHHHHHHHHhCCcceeeee---e--
Confidence 344566677777765 5899999987 56778899999999999999997 999999999999 7655221 1
Q ss_pred CCcccccccccCCCCCCCccEEEEEEEEEEec-CCC
Q 048617 205 GSYSKKLDERNSLSYPGLPARYVLHSVDAFVD-GLP 239 (281)
Q Consensus 205 gsy~~~~e~r~S~SYPGL~vryvLh~v~a~V~-GlP 239 (281)
+....|.|++.. +.++.|.|.+. |.|
T Consensus 88 -------l~~~~~~~~~~~--~~~~~~~~~~~~~~~ 114 (155)
T 1x51_A 88 -------LGEVVHTFSHIK--LTYQVYGLALEGQTP 114 (155)
T ss_dssp -------CCCBCCBCSSCE--EEEEEEEEECSSCCC
T ss_pred -------cceEEEecCCcc--EEEEEEEEEEcCCCC
Confidence 123446777765 77888888763 443
No 16
>3id9_A MUTT/nudix family protein; hydrolase, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.55A {Bacillus thuringiensis str}
Probab=99.60 E-value=5.2e-15 Score=118.85 Aligned_cols=58 Identities=24% Similarity=0.326 Sum_probs=47.8
Q ss_pred EEEEEEEEEecCCcEEEEeecccCCCcccccCCCCCcccCCCCCHHHHHHHHHHHHhCccccC
Q 048617 134 VNVVTVRIIGKDNQILVESHQELSDGSVRNRCRPLAEKMKSNETPEEAVIRAVKEELGSILND 196 (281)
Q Consensus 134 V~Vvva~I~~~~GriLIe~RqefpgG~vR~RWEfPGGKvepGEt~eeAl~REi~EELGi~v~~ 196 (281)
+++.+++|+..+|++|+.+|.. + .+.|+||||++++|||+++|++||++||+|+.+..
T Consensus 22 ~~~~v~~ii~~~~~vLL~~r~~--~---~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~ 79 (171)
T 3id9_A 22 MQVRVTGILIEDEKVLLVKQKV--A---NRDWSLPGGRVENGETLEEAMIREMREETGLEVKI 79 (171)
T ss_dssp CEEEEEEEEEETTEEEEEECSS--T---TCCEECCEEECCTTCCHHHHHHHHHHHHHCCCEEE
T ss_pred eEEEEEEEEEECCEEEEEEEEC--C---CCeEECCCccCCCCCCHHHHHHHHHHHHHCCcccc
Confidence 3444445555678999998863 2 67899999999999999999999999999999863
No 17
>4dyw_A MUTT/nudix family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Burkholderia pseudomallei}
Probab=99.59 E-value=5.3e-15 Score=118.56 Aligned_cols=91 Identities=22% Similarity=0.165 Sum_probs=64.3
Q ss_pred EEEEEEEEecCCcEEEEeecccCCCcccccCCCCCcccCCCCCHHHHHHHHHHHHhCccccCCceEEeeCCCcccccccc
Q 048617 135 NVVTVRIIGKDNQILVESHQELSDGSVRNRCRPLAEKMKSNETPEEAVIRAVKEELGSILNDSITVRIVPGSYSKKLDER 214 (281)
Q Consensus 135 ~Vvva~I~~~~GriLIe~RqefpgG~vR~RWEfPGGKvepGEt~eeAl~REi~EELGi~v~~~~~V~Vl~gsy~~~~e~r 214 (281)
++++++|+..+|+||+.+|.. ++ ..+.|.||||++++|||+++|++||++||+|+.+.....+.+
T Consensus 29 ~~~v~~vi~~~~~vLL~~r~~--~~-~~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~------------ 93 (157)
T 4dyw_A 29 RVGCGAAIVRDGRILLIKRKR--AP-EAGCWGLPGGKVDWLEPVERAVCREIEEELGIALERATLLCV------------ 93 (157)
T ss_dssp EEEEEEEEEETTEEEEEEECS--SS-STTCEECCEEECCTTCCHHHHHHHHHHHHHSCEEESCEEEEE------------
T ss_pred eeEEEEEEEECCEEEEEEecC--CC-CCCEEECCcccCCCCCCHHHHHHHHHHHHHCcccccCcEEEE------------
Confidence 344444333479999999873 32 578899999999999999999999999999999875433322
Q ss_pred cCCCCCCCccEEEEEEEEEEe-cCCCC
Q 048617 215 NSLSYPGLPARYVLHSVDAFV-DGLPE 240 (281)
Q Consensus 215 ~S~SYPGL~vryvLh~v~a~V-~GlPe 240 (281)
..+.|++-...+.++.|.|.+ .|.+.
T Consensus 94 ~~~~~~~~~~~~~~~~f~~~~~~~~~~ 120 (157)
T 4dyw_A 94 VDHIDAANGEHWVAPVYLAHAFSGEPR 120 (157)
T ss_dssp EEEEETTTTEEEEEEEEEESEEESCCC
T ss_pred EEeeccCCCcEEEEEEEEEEEcCCCcc
Confidence 222343334457778888875 55554
No 18
>1sjy_A MUTT/nudix family protein; nudix fold, alpha-beta-alpha sandwich, structural genomics, BSGC structure funded by NIH; 1.39A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1soi_A 1su2_A* 1sz3_A*
Probab=99.59 E-value=6e-15 Score=115.91 Aligned_cols=88 Identities=16% Similarity=0.163 Sum_probs=63.4
Q ss_pred EEEEEEEEecCCcEEEEeecccC-CCcccccCCCCCcccCCCCCHHHHHHHHHHHHhCccccCCceEEeeCCCccccccc
Q 048617 135 NVVTVRIIGKDNQILVESHQELS-DGSVRNRCRPLAEKMKSNETPEEAVIRAVKEELGSILNDSITVRIVPGSYSKKLDE 213 (281)
Q Consensus 135 ~Vvva~I~~~~GriLIe~Rqefp-gG~vR~RWEfPGGKvepGEt~eeAl~REi~EELGi~v~~~~~V~Vl~gsy~~~~e~ 213 (281)
..++++|++.+|++|+.+|...+ ++...+.|+||||++++|||+++|+.||++||+|+.+..... + +
T Consensus 14 ~~~~~vi~~~~~~vLl~~r~~~~~~~~~~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~---l-~-------- 81 (159)
T 1sjy_A 14 RAAGVVLLNERGDILLVQEKGIPGHPEKAGLWHIPSGAVEDGENPQDAAVREACEETGLRVRPVKF---L-G-------- 81 (159)
T ss_dssp EEEEEEEBCTTCCEEEEEESCC----CCCCCEECSEEECCTTSCHHHHHHHHHHHHHSCCEEEEEE---E-E--------
T ss_pred EeEEEEEEeCCCCEEEEEecccCcCCCCCCeEECCccccCCCCCHHHHHHHHHHHHHCccceeeEE---E-E--------
Confidence 35556677788999999987433 344568999999999999999999999999999999863222 1 1
Q ss_pred ccCCCCCCCccEEEEEEEEEEe
Q 048617 214 RNSLSYPGLPARYVLHSVDAFV 235 (281)
Q Consensus 214 r~S~SYPGL~vryvLh~v~a~V 235 (281)
...+.|++- ..+.++.|.|.+
T Consensus 82 ~~~~~~~~~-~~~~~~~f~~~~ 102 (159)
T 1sjy_A 82 AYLGRFPDG-VLILRHVWLAEP 102 (159)
T ss_dssp EEEEECTTS-CEEEEEEEEEEE
T ss_pred EEecccCCC-ceEEEEEEEEEc
Confidence 122224442 347788888876
No 19
>3oga_A Nucleoside triphosphatase NUDI; salmonella enterica subsp. enterica serovar typhimurium STR. unknown function; HET: PO4; 1.75A {Salmonella enterica subsp} PDB: 3n77_A
Probab=99.59 E-value=7.8e-15 Score=117.22 Aligned_cols=66 Identities=24% Similarity=0.303 Sum_probs=49.4
Q ss_pred CCeeEEEEEEEEEEecCCcEEEEeecccCCCcccccCCCCCcccCCCCCHHHHHHHHHHHHhCccccC
Q 048617 129 PPVRTVNVVTVRIIGKDNQILVESHQELSDGSVRNRCRPLAEKMKSNETPEEAVIRAVKEELGSILND 196 (281)
Q Consensus 129 ~p~R~V~Vvva~I~~~~GriLIe~RqefpgG~vR~RWEfPGGKvepGEt~eeAl~REi~EELGi~v~~ 196 (281)
.+++.+.++ ++|++.+|++|+.+|+. ..|...+.|++|||++++|||+++|+.||++||+|+.+..
T Consensus 23 ~~~~~~~~~-~~ii~~~~~vLL~~r~~-~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~ 88 (165)
T 3oga_A 23 NAMRQRTIV-CPLIQNDGCYLLCKMAD-NRGVFPGQWALSGGGVEPGERIEEALRREIREELGEQLIL 88 (165)
T ss_dssp -CCEEEEEE-EEEEEETTEEEEEEECC-------CCEECCCEECCTTCCHHHHHHHHHHHHHCSSCCE
T ss_pred CCcceEEEE-EEEEeCCCEEEEEEecC-CCCCCCCeEECCccccCCCCCHHHHHHHHHHHHhCCCccc
Confidence 355555444 44556789999998872 3445678999999999999999999999999999999873
No 20
>3fsp_A A/G-specific adenine glycosylase; protein-DNA complex, DNA glycosylase, transition state analog, DNA repair; HET: NRI; 2.20A {Geobacillus stearothermophilus} PDB: 3fsq_A* 1rrs_A* 1vrl_A* 1rrq_A* 3g0q_A*
Probab=99.57 E-value=5.3e-15 Score=136.84 Aligned_cols=91 Identities=13% Similarity=0.138 Sum_probs=75.4
Q ss_pred CeeEEEEEEEEEEecCCcEEEEeecccCCCcccccCCCCCcccCCCCCHHHHHHHHHHHHhCccccCCceEEeeCCCccc
Q 048617 130 PVRTVNVVTVRIIGKDNQILVESHQELSDGSVRNRCRPLAEKMKSNETPEEAVIRAVKEELGSILNDSITVRIVPGSYSK 209 (281)
Q Consensus 130 p~R~V~Vvva~I~~~~GriLIe~RqefpgG~vR~RWEfPGGKvepGEt~eeAl~REi~EELGi~v~~~~~V~Vl~gsy~~ 209 (281)
.++.+++++++|.|.+|+||+.+|. .+|...+.|+|||||+|+| |+++|+.||++||+|+.+.....
T Consensus 236 ~~~~~~~~~~vi~~~~g~vLL~rR~--~~g~~~GlWefPGG~ve~g-t~~~al~REl~EE~Gl~v~~~~~---------- 302 (369)
T 3fsp_A 236 AVKQVPLAVAVLADDEGRVLIRKRD--STGLLANLWEFPSCETDGA-DGKEKLEQMVGEQYGLQVELTEP---------- 302 (369)
T ss_dssp CCEEEEEEEEEEECSSSEEEEEECC--SSSTTTTCEECCEEECSSS-CTHHHHHHHHTTSSSCCEEECCC----------
T ss_pred CcceEEEEEEEEEeCCCEEEEEECC--CCCCcCCcccCCCcccCCC-CcHHHHHHHHHHHhCCceeeecc----------
Confidence 3566788888898899999999998 6788999999999999999 99999999999999999763221
Q ss_pred ccccccCCCCCCCccEEEEEEEEEEecC
Q 048617 210 KLDERNSLSYPGLPARYVLHSVDAFVDG 237 (281)
Q Consensus 210 ~~e~r~S~SYPGL~vryvLh~v~a~V~G 237 (281)
+....|.|++.. +.++.+.|++.+
T Consensus 303 --l~~~~h~~~h~~--~~~~~~~~~~~~ 326 (369)
T 3fsp_A 303 --IVSFEHAFSHLV--WQLTVFPGRLVH 326 (369)
T ss_dssp --CCEEEEECSSEE--EEEEEEEEEECC
T ss_pred --cccEEEEcceEE--EEEEEEEEEEcC
Confidence 234557788766 888888888754
No 21
>3shd_A Phosphatase NUDJ; nudix fold, nudix motif, hydrolase, (D)NDP/(D)NTP binding, dephosphorylation; 2.50A {Escherichia coli} PDB: 3dku_A
Probab=99.57 E-value=1.1e-14 Score=114.42 Aligned_cols=85 Identities=16% Similarity=0.183 Sum_probs=63.5
Q ss_pred EEEEEEEEecCCcEEEEeecccCCCcccccCCCCCcccCCCCCHHHHHHHHHHHHhCccccCCceEEeeCCCcccccccc
Q 048617 135 NVVTVRIIGKDNQILVESHQELSDGSVRNRCRPLAEKMKSNETPEEAVIRAVKEELGSILNDSITVRIVPGSYSKKLDER 214 (281)
Q Consensus 135 ~Vvva~I~~~~GriLIe~RqefpgG~vR~RWEfPGGKvepGEt~eeAl~REi~EELGi~v~~~~~V~Vl~gsy~~~~e~r 214 (281)
++++++|++.+|++|+.+|. .. -.+.|.+|||++++|||+++|++||++||+|+.+.....+. .
T Consensus 5 ~~~v~~ii~~~~~vLl~~r~--~~--~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~------------~ 68 (153)
T 3shd_A 5 HVTVACVVHAEGKFLVVEET--IN--GKALWNQPAGHLEADETLVEAAARELWEETGISAQPQHFIR------------M 68 (153)
T ss_dssp EEEEEEEEEETTEEEEEEEE--ET--TEEEEECSEEECCTTCCHHHHHHHHHHHHHCCCCCCCEEEE------------E
T ss_pred ceEEEEEEEeCCEEEEEEec--CC--CCCCEECCeEEeCCCCCHHHHHHHHHHHHHCcccccCcEEE------------E
Confidence 56677777889999999886 22 25689999999999999999999999999999987543322 1
Q ss_pred cCCCCCCCccEEEEEEEEEEec
Q 048617 215 NSLSYPGLPARYVLHSVDAFVD 236 (281)
Q Consensus 215 ~S~SYPGL~vryvLh~v~a~V~ 236 (281)
..+.|++. ..+..+.|.|.+.
T Consensus 69 ~~~~~~~~-~~~~~~~f~~~~~ 89 (153)
T 3shd_A 69 HQWIAPDK-TPFLRFLFAIELE 89 (153)
T ss_dssp EEECCTTS-CCEEEEEEEEECS
T ss_pred EEEecCCC-ceEEEEEEEEEcc
Confidence 22445543 2366677778763
No 22
>1rya_A GDP-mannose mannosyl hydrolase; GDP-glucose, nudix, nudix Mg-complex; HET: GDP; 1.30A {Escherichia coli} SCOP: d.113.1.5 PDB: 2gt2_A 2gt4_A* 2i8t_A* 2i8u_A*
Probab=99.57 E-value=6.5e-15 Score=115.81 Aligned_cols=58 Identities=17% Similarity=0.154 Sum_probs=49.5
Q ss_pred EEEEEEEEecCCcEEEEeecccCCCcccccCCCCCcccCCCCCHHHHHHHHHHHHhCcccc
Q 048617 135 NVVTVRIIGKDNQILVESHQELSDGSVRNRCRPLAEKMKSNETPEEAVIRAVKEELGSILN 195 (281)
Q Consensus 135 ~Vvva~I~~~~GriLIe~RqefpgG~vR~RWEfPGGKvepGEt~eeAl~REi~EELGi~v~ 195 (281)
..|.++|++.+|++|+.+|.. ++ .++.|.||||++++|||+++|+.||++||+|+.+.
T Consensus 19 ~~v~~vi~~~~~~vLl~~r~~--~~-~~g~w~~PgG~ve~gE~~~~aa~REl~EEtGl~~~ 76 (160)
T 1rya_A 19 VSLDFIVENSRGEFLLGKRTN--RP-AQGYWFVPGGRVQKDETLEAAFERLTMAELGLRLP 76 (160)
T ss_dssp EEEEEEEECTTSCEEEEEECS--SS-STTSEECCEEECCTTCCHHHHHHHHHHHHHSSCCC
T ss_pred EEEEEEEEcCCCEEEEEeccC--CC-CCCEEECCccccCCCCCHHHHHHHHHHHHHCCCCC
Confidence 345566777899999999873 33 57899999999999999999999999999999964
No 23
>1vcd_A NDX1; nudix protein, diadenosine polyphosphate, AP6A, thermus THER HB8, hydrolase, riken structural genomics/proteomics initia RSGI; 1.70A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1vc8_A 1vc9_A*
Probab=99.55 E-value=1.6e-14 Score=109.52 Aligned_cols=79 Identities=14% Similarity=-0.016 Sum_probs=58.5
Q ss_pred EEEEEEEecCCcEEEEeecccCCCcccccCCCCCcccCCCCCHHHHHHHHHHHHhCccccCCceEEeeCCCccccccccc
Q 048617 136 VVTVRIIGKDNQILVESHQELSDGSVRNRCRPLAEKMKSNETPEEAVIRAVKEELGSILNDSITVRIVPGSYSKKLDERN 215 (281)
Q Consensus 136 Vvva~I~~~~GriLIe~RqefpgG~vR~RWEfPGGKvepGEt~eeAl~REi~EELGi~v~~~~~V~Vl~gsy~~~~e~r~ 215 (281)
.++++|++++|++|+.+|.. +.|.||||++++|||+++|+.||++||+|+.+.....+. ..
T Consensus 4 ~~~~vi~~~~~~vLl~~r~~-------g~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~~------------~~ 64 (126)
T 1vcd_A 4 GAGGVVFNAKREVLLLRDRM-------GFWVFPKGHPEPGESLEEAAVREVWEETGVRAEVLLPLY------------PT 64 (126)
T ss_dssp EEEEEEECTTSCEEEEECTT-------SCEECCEECCCTTCCHHHHHHHHHHHHHCCEEEEEEEEE------------EE
T ss_pred EEEEEEEcCCCEEEEEEECC-------CCccCCcCcCCCCCCHHHHHHHHHHHhhCcEeeeccEEe------------EE
Confidence 34566778889999998862 579999999999999999999999999999986322211 22
Q ss_pred CCCCCCCccEEEEEEEEEEe
Q 048617 216 SLSYPGLPARYVLHSVDAFV 235 (281)
Q Consensus 216 S~SYPGL~vryvLh~v~a~V 235 (281)
.+.+++.. ..++.|.|.+
T Consensus 65 ~~~~~~~~--~~~~~~~~~~ 82 (126)
T 1vcd_A 65 RYVNPKGV--EREVHWFLMR 82 (126)
T ss_dssp EEECTTSC--EEEEEEEEEE
T ss_pred EEecCCce--EEEEEEEEEE
Confidence 23345554 5566666664
No 24
>1q27_A Putative nudix hydrolase DR0079; radiation resistance; NMR {Deinococcus radiodurans} SCOP: d.113.1.2 PDB: 2o5f_A
Probab=99.55 E-value=4e-14 Score=113.70 Aligned_cols=61 Identities=25% Similarity=0.280 Sum_probs=51.1
Q ss_pred EEEEEEEecCCcEEEEeecccCCCcccccCC-CCCcccCCCCCHHHHHHHHHHHHhCccccCC
Q 048617 136 VVTVRIIGKDNQILVESHQELSDGSVRNRCR-PLAEKMKSNETPEEAVIRAVKEELGSILNDS 197 (281)
Q Consensus 136 Vvva~I~~~~GriLIe~RqefpgG~vR~RWE-fPGGKvepGEt~eeAl~REi~EELGi~v~~~ 197 (281)
+++++|++.+|++|+.+|.. ..+...+.|+ ||||++++|||+++|+.||++||+|+.+...
T Consensus 36 ~v~v~i~~~~~~vLl~~r~~-~~~~~~g~w~~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~ 97 (171)
T 1q27_A 36 VVNAFLRNSQGQLWIPRRSP-SKSLFPNALDVSVGGAVQSGETYEEAFRREAREELNVEIDAL 97 (171)
T ss_dssp EEEEEEEETTTEEEECCSCC-SSSCCCCSCCCSEEEECSSSSCHHHHHHHHHHHHHSCTTSSS
T ss_pred EEEEEEECCCCeEEEEEecC-CCCCCCCccccccCccccCCCCHHHHHHHHHHHHHCCccccc
Confidence 44556678899999998862 3344578998 9999999999999999999999999998753
No 25
>2yyh_A MUTT domain, 8-OXO-DGTPase domain; nudix family protein, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.80A {Aquifex aeolicus}
Probab=99.55 E-value=3.7e-14 Score=110.04 Aligned_cols=87 Identities=22% Similarity=0.122 Sum_probs=58.2
Q ss_pred EEEEEEe--cCCc--EEEEeecccCCCcccccCCCCCcccCCCCCHHHHHHHHHHHHhCccccCCceEEeeCCCcccccc
Q 048617 137 VTVRIIG--KDNQ--ILVESHQELSDGSVRNRCRPLAEKMKSNETPEEAVIRAVKEELGSILNDSITVRIVPGSYSKKLD 212 (281)
Q Consensus 137 vva~I~~--~~Gr--iLIe~RqefpgG~vR~RWEfPGGKvepGEt~eeAl~REi~EELGi~v~~~~~V~Vl~gsy~~~~e 212 (281)
|.|+|.+ ++|+ +|+.+|...++ .|+||||++++|||+++|+.||++||+|+.+..... . +.|.
T Consensus 12 v~~vi~~~~~~~~~~vLl~~r~~~~~-----~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~---~-~~~~---- 78 (139)
T 2yyh_A 12 TDVIIRLWDGENFKGIVLIERKYPPV-----GLALPGGFVEVGERVEEAAAREMREETGLEVRLHKL---M-GVYS---- 78 (139)
T ss_dssp EEEEEEEEETTEEEEEEEEEECSSSC-----SEECCEEECCTTCCHHHHHHHHHHHHHCCCCEEEEE---E-EEEC----
T ss_pred EEEEEEEEcCCCcEEEEEEEecCCCC-----cEECccccCCCCCCHHHHHHHHHHHHHCCCcccceE---E-EEEC----
Confidence 3344444 6888 99998874332 299999999999999999999999999999863222 1 1111
Q ss_pred cccCCCCCCCccEEEEEEEEEEecCCCC
Q 048617 213 ERNSLSYPGLPARYVLHSVDAFVDGLPE 240 (281)
Q Consensus 213 ~r~S~SYPGL~vryvLh~v~a~V~GlPe 240 (281)
. ....++. ...++.|.|.+.|.+.
T Consensus 79 -~-~~~~~~~--~~~~~~f~~~~~~~~~ 102 (139)
T 2yyh_A 79 -D-PERDPRA--HVVSVVWIGDAQGEPK 102 (139)
T ss_dssp -C-TTSCTTS--CEEEEEEEEEEESCCC
T ss_pred -C-CCcCCCc--eEEEEEEEEecCCccC
Confidence 0 0112222 3667777787766553
No 26
>3f13_A Putative nudix hydrolase family member; structural genomics, PSI-2, protein structure initiative; 1.70A {Chromobacterium violaceum}
Probab=99.55 E-value=1.6e-14 Score=118.87 Aligned_cols=83 Identities=20% Similarity=0.220 Sum_probs=57.8
Q ss_pred eEEEEEEEEEEecCCcEEEEeecccCCCcccccCCCCCcccCCCCCHHHHHHHHHHHHhCccccCCceEEeeCCCccccc
Q 048617 132 RTVNVVTVRIIGKDNQILVESHQELSDGSVRNRCRPLAEKMKSNETPEEAVIRAVKEELGSILNDSITVRIVPGSYSKKL 211 (281)
Q Consensus 132 R~V~Vvva~I~~~~GriLIe~RqefpgG~vR~RWEfPGGKvepGEt~eeAl~REi~EELGi~v~~~~~V~Vl~gsy~~~~ 211 (281)
+.+ +++++|++.+|++|+.+|+ .+.|.+|||++++|||+++|+.||++||+|+.+..... + +
T Consensus 14 ~~~-~~~~~ii~~~~~vLL~~r~-------~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~---l-~------ 75 (163)
T 3f13_A 14 DLA-RRATAIIEMPDGVLVTASR-------GGRYNLPGGKANRGELRSQALIREIREETGLRINSMLY---L-F------ 75 (163)
T ss_dssp SCE-EEEEEECEETTEEEEEECC----------BBCSEEECCTTCCHHHHHHHHHHHHHCCCCCEEEE---E-E------
T ss_pred Cce-EEEEEEEEeCCEEEEEEEC-------CCeEECCceeCCCCCCHHHHHHHHHHHHHCcccceeEE---E-E------
Confidence 334 4445555667789998875 35899999999999999999999999999999873222 1 1
Q ss_pred ccccCCCCCCCccEEEEEEEEEEecCCCC
Q 048617 212 DERNSLSYPGLPARYVLHSVDAFVDGLPE 240 (281)
Q Consensus 212 e~r~S~SYPGL~vryvLh~v~a~V~GlPe 240 (281)
.+.|++ ..++.|.|.+.|.|.
T Consensus 76 ----~~~~~~----~~~~~f~~~~~~~~~ 96 (163)
T 3f13_A 76 ----DHITPF----NAHKVYLCIAQGQPK 96 (163)
T ss_dssp ----EEECSS----EEEEEEEEEC-CCCC
T ss_pred ----EEecCC----eEEEEEEEEECCcCc
Confidence 133553 556667777777766
No 27
>3f6a_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.02A {Clostridium perfringens atcc 13124}
Probab=99.54 E-value=3.1e-14 Score=113.39 Aligned_cols=54 Identities=35% Similarity=0.532 Sum_probs=45.6
Q ss_pred EEEEEEEecCCcEEEEeecccCCCcccccCCCCCcccCCCCCHHHHHHHHHHHHhCccccC
Q 048617 136 VVTVRIIGKDNQILVESHQELSDGSVRNRCRPLAEKMKSNETPEEAVIRAVKEELGSILND 196 (281)
Q Consensus 136 Vvva~I~~~~GriLIe~RqefpgG~vR~RWEfPGGKvepGEt~eeAl~REi~EELGi~v~~ 196 (281)
+|+|+|.+ +|+||+.+|.. .+.|.+|||++++|||+++|++||++||+|+.+..
T Consensus 8 ~v~~vi~~-~~~vLL~~r~~------~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~ 61 (159)
T 3f6a_A 8 TVSVFIVC-KDKVLLHLHKK------AKKMLPLGGHIEVNELPEEACIREAKEEAGLNVTL 61 (159)
T ss_dssp EEEEEEEE-TTEEEEEECSS------SCCEECEEEECCTTCCHHHHHHHHHHHHHCCCCEE
T ss_pred EEEEEEEE-CCEEEEEEcCC------CCeEECCccCccCCCCHHHHHHHHHHHHhCCCcee
Confidence 34445555 78999998862 46899999999999999999999999999999874
No 28
>2pqv_A MUTT/nudix family protein; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 1.63A {Streptococcus pneumoniae}
Probab=99.53 E-value=2.5e-14 Score=112.79 Aligned_cols=56 Identities=29% Similarity=0.480 Sum_probs=47.2
Q ss_pred EEEEEEEEEEecCCcEEEEeecccCCCcccccCCCCCcccCCCCCHHHHHHHHHHHHhCccccC
Q 048617 133 TVNVVTVRIIGKDNQILVESHQELSDGSVRNRCRPLAEKMKSNETPEEAVIRAVKEELGSILND 196 (281)
Q Consensus 133 ~V~Vvva~I~~~~GriLIe~RqefpgG~vR~RWEfPGGKvepGEt~eeAl~REi~EELGi~v~~ 196 (281)
.+++++++|+..+|++|+.+| .+.|.+|||++++|||+++|+.||++||+|+.+..
T Consensus 17 ~~~~~~~~ii~~~~~vLl~~r--------~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~ 72 (154)
T 2pqv_A 17 VFGVRATALIVQNHKLLVTKD--------KGKYYTIGGAIQVNESTEDAVVREVKEELGVKAQA 72 (154)
T ss_dssp EEEEEEEECCEETTEEEEEEE--------TTEEECEEEECBTTCCHHHHHHHHHHHHHCCCEEE
T ss_pred eEeEEEEEEEEECCEEEEEec--------CCeEECcccCcCCCCCHHHHHHHHHHHHhCCeeee
Confidence 345555555556889999988 45799999999999999999999999999999874
No 29
>1ktg_A Diadenosine tetraphosphate hydrolase; nudix, AMP, magnesium cluster; HET: AMP; 1.80A {Caenorhabditis elegans} SCOP: d.113.1.1 PDB: 1kt9_A*
Probab=99.52 E-value=2.8e-14 Score=109.70 Aligned_cols=88 Identities=17% Similarity=0.098 Sum_probs=59.3
Q ss_pred EEEEEEEEec---CCcEEEEeecccCCCcccccCCCCCcccCCCCCHHHHHHHHHHHHhCccccCCceEEeeCCCccccc
Q 048617 135 NVVTVRIIGK---DNQILVESHQELSDGSVRNRCRPLAEKMKSNETPEEAVIRAVKEELGSILNDSITVRIVPGSYSKKL 211 (281)
Q Consensus 135 ~Vvva~I~~~---~GriLIe~RqefpgG~vR~RWEfPGGKvepGEt~eeAl~REi~EELGi~v~~~~~V~Vl~gsy~~~~ 211 (281)
..|+++|++. ++++|+.+|. ++ .+.|.||||++++|||+++|+.||++||+|+.+... .+... +
T Consensus 4 ~~~~~vi~~~~~~~~~vLl~~r~--~~---~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~---~~~~~-~---- 70 (138)
T 1ktg_A 4 KAAGLVIYRKLAGKIEFLLLQAS--YP---PHHWTPPKGHVDPGEDEWQAAIRETKEEANITKEQL---TIHED-C---- 70 (138)
T ss_dssp EEEEEEEEEEETTEEEEEEEEES--ST---TCCEESSEEECCTTCCHHHHHHHHHHHHHCCCGGGE---EEEEE-E----
T ss_pred EEEEEEEEEecCCCcEEEEEEcc--CC---CCcEeCCccccCCCCCHHHHHHHHHHHHHCCCccce---EEecc-c----
Confidence 3445555554 4789999886 32 368999999999999999999999999999976522 11100 0
Q ss_pred ccccCCCCCCCccEEEEEEEEEEecC
Q 048617 212 DERNSLSYPGLPARYVLHSVDAFVDG 237 (281)
Q Consensus 212 e~r~S~SYPGL~vryvLh~v~a~V~G 237 (281)
.....+.+++ ..+.++.|.|.+.+
T Consensus 71 ~~~~~~~~~~--~~~~~~~f~~~~~~ 94 (138)
T 1ktg_A 71 HETLFYEAKG--KPKSVKYWLAKLNN 94 (138)
T ss_dssp EEEEEEEETT--EEEEEEEEEEEECS
T ss_pred cceEEEEeCC--CceEEEEEEEEecC
Confidence 1122233443 34777888887744
No 30
>2fkb_A Putative nudix hydrolase YFCD; putative protein, MAD, structural genomics, escherichia coli putative nudix hydrolase, PSI; HET: MSE; 2.00A {Escherichia coli K12} SCOP: d.113.1.2
Probab=99.52 E-value=3.9e-14 Score=114.59 Aligned_cols=58 Identities=17% Similarity=0.144 Sum_probs=48.6
Q ss_pred EEEEEEEecCCcEEEEeecccCCC-cccccCCC-CCcccCCCCCHHHHHHHHHHHHhCcccc
Q 048617 136 VVTVRIIGKDNQILVESHQELSDG-SVRNRCRP-LAEKMKSNETPEEAVIRAVKEELGSILN 195 (281)
Q Consensus 136 Vvva~I~~~~GriLIe~RqefpgG-~vR~RWEf-PGGKvepGEt~eeAl~REi~EELGi~v~ 195 (281)
+++++|++.+|++|+.+|. .++ ...+.|.+ |||++++|||+++|+.||++||+|+.+.
T Consensus 39 ~~~v~i~~~~~~vLl~~R~--~~~~~~~g~w~l~pGG~ve~gE~~~~aa~REl~EEtGl~~~ 98 (180)
T 2fkb_A 39 ATYIVVHDGMGKILVQRRT--ETKDFLPGMLDATAGGVVQADEQLLESARREAEEELGIAGV 98 (180)
T ss_dssp EEEEEEECSSSCEEEEEEC--SSCSSSTTCEESSBCCBCBTTCCHHHHHHHHHHHHHCCBSC
T ss_pred EEEEEEECCCCEEEEEECC--CCCccCCCcEEeecCCCCCCCCCHHHHHHHHHHHHHCCCcc
Confidence 4444566888999998886 333 34789999 9999999999999999999999999875
No 31
>3fk9_A Mutator MUTT protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.50A {Bacillus halodurans}
Probab=99.52 E-value=3.1e-14 Score=118.85 Aligned_cols=59 Identities=22% Similarity=0.247 Sum_probs=49.2
Q ss_pred EEEEEEEEEecCCcEEEEeecccCCCcccccCCCCCcccCCCCCHHHHHHHHHHHHhCccccCCce
Q 048617 134 VNVVTVRIIGKDNQILVESHQELSDGSVRNRCRPLAEKMKSNETPEEAVIRAVKEELGSILNDSIT 199 (281)
Q Consensus 134 V~Vvva~I~~~~GriLIe~RqefpgG~vR~RWEfPGGKvepGEt~eeAl~REi~EELGi~v~~~~~ 199 (281)
.+|++|+|.+ +|+||+.+|+ . ++.|.+||||+++|||+++|+.||++||+|+.+.....
T Consensus 4 ~~v~~~vi~~-~~~vLL~~r~--~----~g~W~lPGG~ve~gEs~~~aa~REl~EEtGl~~~~~~~ 62 (188)
T 3fk9_A 4 QRVTNCIVVD-HDQVLLLQKP--R----RGWWVAPGGKMEAGESILETVKREYWEETGITVKNPEL 62 (188)
T ss_dssp CEEEEEEEEE-TTEEEEEECT--T----TCCEECCEEECCTTCCHHHHHHHHHHHHHSCEESSCEE
T ss_pred eEEEEEEEEE-CCEEEEEEeC--C----CCeEECCeecccCCCCHHHHHHHHHHHHHCCCCCCceE
Confidence 4566666655 7899999885 1 56899999999999999999999999999999885433
No 32
>2o1c_A DATP pyrophosphohydrolase; nudix NTP hydrolase NTP pyrophosphohydrolase MUTT dihydroneo triphosphate pyrophosphohydrolase folate biosynthesis; 1.80A {Escherichia coli} PDB: 2o5w_A
Probab=99.52 E-value=6.5e-14 Score=108.03 Aligned_cols=94 Identities=16% Similarity=0.163 Sum_probs=63.6
Q ss_pred EEEEEEEecC-CcEEEEeecccCCCcccccCCCCCcccCCCCCHHHHHHHHHHHHhCccccCCc--eEEee-CCCccccc
Q 048617 136 VVTVRIIGKD-NQILVESHQELSDGSVRNRCRPLAEKMKSNETPEEAVIRAVKEELGSILNDSI--TVRIV-PGSYSKKL 211 (281)
Q Consensus 136 Vvva~I~~~~-GriLIe~RqefpgG~vR~RWEfPGGKvepGEt~eeAl~REi~EELGi~v~~~~--~V~Vl-~gsy~~~~ 211 (281)
.|+++|++.+ |++|+.+|.. + .+.|.||||++++|||+++|+.||++||+|+.+.... .+.+. ...|. .
T Consensus 11 ~v~~~i~~~~~~~vLl~~r~~--~---~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~--~ 83 (150)
T 2o1c_A 11 SILVVIYAQDTKRVLMLQRRD--D---PDFWQSVTGSVEEGETAPQAAMREVKEEVTIDVVAEQLTLIDCQRTVEFE--I 83 (150)
T ss_dssp EEEEEEEETTTCEEEEEECSS--S---TTCEESEEEECCTTCCHHHHHHHHHHHHHCCCHHHHTCCEEEEEEEEEEE--C
T ss_pred EEEEEEEeCCCCEEEEEEecC--C---CCceECCccccCCCCCHHHHHHHHHHHHhCCCccccceeEEeeeceeeee--e
Confidence 3445666664 9999998862 2 4689999999999999999999999999999987421 11111 00000 0
Q ss_pred ccccCCCCCCCccEEEEEEEEEEec
Q 048617 212 DERNSLSYPGLPARYVLHSVDAFVD 236 (281)
Q Consensus 212 e~r~S~SYPGL~vryvLh~v~a~V~ 236 (281)
.....+.|++-.....++.|.|.+.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~f~~~~~ 108 (150)
T 2o1c_A 84 FSHLRHRYAPGVTRNTESWFCLALP 108 (150)
T ss_dssp CGGGGGGBCTTCCEEEEEEEEEEES
T ss_pred ecccccccCCCCcceEEEEEEEEcC
Confidence 1233456775444577888888774
No 33
>3son_A Hypothetical nudix hydrolase; structural genomics, joint center for structural GENO JCSG, protein structure initiative, PSI-biology; HET: MSE; 1.71A {Listeria monocytogenes}
Probab=99.50 E-value=6.8e-14 Score=109.73 Aligned_cols=91 Identities=14% Similarity=-0.006 Sum_probs=63.9
Q ss_pred EEEEEEEEEecCCcEEEEeecccCCCcccccCCCCCcccCCCCCHHHHHHHHHHHHhCccccCCceEEeeCCCccccccc
Q 048617 134 VNVVTVRIIGKDNQILVESHQELSDGSVRNRCRPLAEKMKSNETPEEAVIRAVKEELGSILNDSITVRIVPGSYSKKLDE 213 (281)
Q Consensus 134 V~Vvva~I~~~~GriLIe~RqefpgG~vR~RWEfPGGKvepGEt~eeAl~REi~EELGi~v~~~~~V~Vl~gsy~~~~e~ 213 (281)
|.|++..+.+.+|++|+.+|.. + +.|.+|||++++|||+++|+.||++||+|+.+..... .+. ..+. ..
T Consensus 8 v~vvi~~~~~~~~~vLl~~r~~--~----g~w~~PgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~-~~~-~~~~---~~ 76 (149)
T 3son_A 8 VLVIPFIKTEANYQFGVLHRTD--A----DVWQFVAGGGEDEEAISETAKRESIEELNLDVDVKMY-SLD-SHAS---IP 76 (149)
T ss_dssp EEEEEEEECSSSEEEEEEEESS--S----SCEECEEEECCTTCCHHHHHHHHHHHHHTCCSCCCEE-EEE-EEEE---EE
T ss_pred EEEEEEEecCCCeEEEEEEEcC--C----CCEeCCccccCCCCCHHHHHHHHHHHHhCCCcccceE-EEE-eeec---cc
Confidence 5555555557889999998862 2 7899999999999999999999999999999885311 111 1000 12
Q ss_pred ccCCCCCCCccEEEEEEEEEEec
Q 048617 214 RNSLSYPGLPARYVLHSVDAFVD 236 (281)
Q Consensus 214 r~S~SYPGL~vryvLh~v~a~V~ 236 (281)
...+.|++- ....+|.|.|.+.
T Consensus 77 ~~~~~~~~~-~~~~~~~f~~~~~ 98 (149)
T 3son_A 77 NFHFSFNKP-YVVPEYCFAIDLT 98 (149)
T ss_dssp GGGTCSSSC-SEEEEEEEEEECT
T ss_pred ceeeccCCc-eEeEEEEEEEEcC
Confidence 234566663 3467788888764
No 34
>3h95_A Nucleoside diphosphate-linked moiety X motif 6; NUDT6, nudix, hydrolase, GFG, GFG-1, FGF2AS, structural GENO structural genomics consortium, SGC; HET: FLC; 1.70A {Homo sapiens}
Probab=99.50 E-value=6.8e-14 Score=116.93 Aligned_cols=61 Identities=20% Similarity=0.174 Sum_probs=49.9
Q ss_pred eEEEEEEEEEEecCCcEEEEeecccCCCcccccCCCCCcccCCCCCHHHHHHHHHHHHhCccccC
Q 048617 132 RTVNVVTVRIIGKDNQILVESHQELSDGSVRNRCRPLAEKMKSNETPEEAVIRAVKEELGSILND 196 (281)
Q Consensus 132 R~V~Vvva~I~~~~GriLIe~RqefpgG~vR~RWEfPGGKvepGEt~eeAl~REi~EELGi~v~~ 196 (281)
..|.|+++++.+++|++|+.+|.. . ..+.|.+|||++++|||+++|+.||++||+|+.+..
T Consensus 25 ~~v~v~~~v~~~~~~~vLL~~r~~--~--~~g~w~lPGG~ve~gEs~~~aA~REl~EEtGl~~~~ 85 (199)
T 3h95_A 25 HQVGVAGAVFDESTRKILVVQDRN--K--LKNMWKFPGGLSEPEEDIGDTAVREVFEETGIKSEF 85 (199)
T ss_dssp -CCEEEEEEEETTTTEEEEEEESS--S--STTSBBCCEEECCTTCCHHHHHHHHHHHHHCCCEEE
T ss_pred ccceEEEEEEeCCCCEEEEEEEcC--C--CCCCEECCccccCCCCCHHHHHHHHHHHHhCCcccc
Confidence 345566666655678999998862 1 368999999999999999999999999999999873
No 35
>1hzt_A Isopentenyl diphosphate delta-isomerase; dimethylallyl, isoprenoids; 1.45A {Escherichia coli} SCOP: d.113.1.2 PDB: 1hx3_A 1r67_A 1x84_A* 1x83_A* 1ppv_A* 1nfz_A* 1nfs_A* 1ppw_A* 1pvf_A 2veh_A* 2vej_A 2vnp_A* 2vnq_A 2g74_A 2g73_A* 2b2k_A 1i9a_A 1q54_A* 1ow2_A* 3hyq_A*
Probab=99.50 E-value=3.7e-14 Score=116.88 Aligned_cols=94 Identities=19% Similarity=0.197 Sum_probs=64.9
Q ss_pred EEEEEEEecCCcEEEEeecccCCCcccccCCC-CCcccCCCCCHHHHHHHHHHHHhCccccCCceEEeeCCCcccccccc
Q 048617 136 VVTVRIIGKDNQILVESHQELSDGSVRNRCRP-LAEKMKSNETPEEAVIRAVKEELGSILNDSITVRIVPGSYSKKLDER 214 (281)
Q Consensus 136 Vvva~I~~~~GriLIe~RqefpgG~vR~RWEf-PGGKvepGEt~eeAl~REi~EELGi~v~~~~~V~Vl~gsy~~~~e~r 214 (281)
+|+++|++++|++|+.+|.. .++...+.|.+ |||++++|||+++|+.||++||+|+.+.... ..+ +.|.
T Consensus 34 ~v~~~i~~~~g~vLl~~R~~-~~~~~~g~w~~~PgG~ve~gEt~~~aa~REl~EEtGl~~~~~~--~~~-~~~~------ 103 (190)
T 1hzt_A 34 AFSSWLFNAKGQLLVTRRAL-SKKAWPGVWTNSVCGHPQLGESNEDAVIRRCRYELGVEITPPE--SIY-PDFR------ 103 (190)
T ss_dssp CEEEEEECTTCCEEEEEECT-TCSSSTTCEEESEEECCCTTCCHHHHHHHHHHHHHCCCBSCCE--EEE-TTCE------
T ss_pred EEEEEEEcCCCEEEEEEeCC-CCCCCCCcccCcccccCCCCCCHHHHHHHHHHHHHCCCchhhh--eee-eeEE------
Confidence 45566778899999998862 33445789999 9999999999999999999999999987320 222 1111
Q ss_pred cCCCCC-CCccEEEEEEEEEEecCCC
Q 048617 215 NSLSYP-GLPARYVLHSVDAFVDGLP 239 (281)
Q Consensus 215 ~S~SYP-GL~vryvLh~v~a~V~GlP 239 (281)
....|+ +......++.|.|.+.|.+
T Consensus 104 ~~~~~~~~~~~~~~~~~f~~~~~~~~ 129 (190)
T 1hzt_A 104 YRATDPSGIVENEVCPVFAARTTSAL 129 (190)
T ss_dssp EEEECTTSCEEEEECCEEEEEBCSCC
T ss_pred EEeeCCCCCcceEEEEEEEEecCCCC
Confidence 111234 3334566677778766543
No 36
>2w4e_A MUTT/nudix family protein; ADP-ribose pyrophosphatase, hydrolase; 2.00A {Deinococcus radiodurans}
Probab=99.49 E-value=6.8e-14 Score=110.77 Aligned_cols=59 Identities=14% Similarity=0.114 Sum_probs=46.9
Q ss_pred EEEEEEEEecCCcEEEEeecccCCCcccccCCCCCcccCCCCCHHHHHHHHHHHHhCcccc
Q 048617 135 NVVTVRIIGKDNQILVESHQELSDGSVRNRCRPLAEKMKSNETPEEAVIRAVKEELGSILN 195 (281)
Q Consensus 135 ~Vvva~I~~~~GriLIe~RqefpgG~vR~RWEfPGGKvepGEt~eeAl~REi~EELGi~v~ 195 (281)
..|++++++++|++|+-++.+.+. -++.|+||||++|+|||+++|+.||++||+|+.+.
T Consensus 6 ~~v~vi~~~~~~~vLLv~~~r~~~--~~~~w~~PgG~ve~gEt~~~aa~REl~EEtGl~~~ 64 (145)
T 2w4e_A 6 RAVFILPVTAQGEAVLIRQFRYPL--RATITEIVAGGVEKGEDLGAAAARELLEEVGGAAS 64 (145)
T ss_dssp EEEEEEEEETTSEEEEEEEEETTT--TEEEEECEEEECCTTCCHHHHHHHHHHHHHCEECS
T ss_pred CEEEEEEEcCCCEEEEEEEEecCC--CCCEEEeCCccCCCCCCHHHHHHHHHHHhhCCccC
Confidence 355566778899997654432232 24689999999999999999999999999999875
No 37
>3cng_A Nudix hydrolase; structural genomics, APC7497, PSI-2, protei structure initiative; 2.00A {Nitrosomonas europaea atcc 19718}
Probab=99.48 E-value=1.1e-13 Score=114.70 Aligned_cols=80 Identities=20% Similarity=0.133 Sum_probs=58.2
Q ss_pred EEEEEEEecCCcEEEEeecccCCCcccccCCCCCcccCCCCCHHHHHHHHHHHHhCccccCCceEEeeCCCccccccccc
Q 048617 136 VVTVRIIGKDNQILVESHQELSDGSVRNRCRPLAEKMKSNETPEEAVIRAVKEELGSILNDSITVRIVPGSYSKKLDERN 215 (281)
Q Consensus 136 Vvva~I~~~~GriLIe~RqefpgG~vR~RWEfPGGKvepGEt~eeAl~REi~EELGi~v~~~~~V~Vl~gsy~~~~e~r~ 215 (281)
+|+++|. .+|+||+.+|..- + ..+.|+||||++++|||+++|++||++||+|+.+...+ +. .
T Consensus 42 ~v~~ii~-~~~~vLL~~r~~~--~-~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~---~~-~---------- 103 (189)
T 3cng_A 42 IVGCIPE-WENKVLLCKRAIA--P-YRGKWTLPAGFMENNETLVQGAARETLEEANARVEIRE---LY-A---------- 103 (189)
T ss_dssp EEEEEEE-ETTEEEEEEESSS--S-STTCEECSEEECCTTCCHHHHHHHHHHHHHCCCEEEEE---EE-E----------
T ss_pred EEEEEEE-eCCEEEEEEccCC--C-CCCeEECceeeccCCCCHHHHHHHHHHHHHCCccccce---eE-E----------
Confidence 3444444 4889999988742 2 36789999999999999999999999999999976321 11 1
Q ss_pred CCCCCCCccEEEEEEEEEEe
Q 048617 216 SLSYPGLPARYVLHSVDAFV 235 (281)
Q Consensus 216 S~SYPGL~vryvLh~v~a~V 235 (281)
.++||+.. ..++.|.|.+
T Consensus 104 ~~~~~~~~--~~~~~f~~~~ 121 (189)
T 3cng_A 104 VYSLPHIS--QVYMLFRAKL 121 (189)
T ss_dssp EEEEGGGT--EEEEEEEEEE
T ss_pred EEecCCCc--EEEEEEEEEe
Confidence 13355544 6677777876
No 38
>2b06_A MUTT/nudix family protein; structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 1.40A {Streptococcus pneumoniae} SCOP: d.113.1.1
Probab=99.47 E-value=1.8e-13 Score=107.64 Aligned_cols=88 Identities=18% Similarity=0.252 Sum_probs=57.5
Q ss_pred EEEEEEEEecCCc----EEEEeecccCCCcccccCCCCCcccCCCCCHHHHHHHHHHHHhCccccCCceEEeeCCCcccc
Q 048617 135 NVVTVRIIGKDNQ----ILVESHQELSDGSVRNRCRPLAEKMKSNETPEEAVIRAVKEELGSILNDSITVRIVPGSYSKK 210 (281)
Q Consensus 135 ~Vvva~I~~~~Gr----iLIe~RqefpgG~vR~RWEfPGGKvepGEt~eeAl~REi~EELGi~v~~~~~V~Vl~gsy~~~ 210 (281)
++++++|+..+|+ +|+.+|. .++ ..+ |.+|||++++|||+++|+.||++||+|+.+.....+.+.
T Consensus 8 ~~~~~~ii~~~~~~~~~vLl~~r~--~~~-~~g-w~lPgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~------- 76 (155)
T 2b06_A 8 ILTNICLIEDLETQRVVMQYRAPE--NNR-WSG-YAFPGGHVENDEAFAESVIREIYEETGLTIQNPQLVGIK------- 76 (155)
T ss_dssp EEEEEEEEEETTTTEEEEEEEC--------CCE-EECCCCBCCTTSCHHHHHHHHHHHHHSEEEESCEEEEEE-------
T ss_pred EEEEEEEEEECCCCeEEEEEEECC--CCC-CCC-EeccceecCCCCCHHHHHHHHHHHHhCccccCCcEEEEE-------
Confidence 3444444445777 9999886 344 455 899999999999999999999999999998754332211
Q ss_pred cccccCCCC-CCCccEEEEEEEEEEe-cCCCC
Q 048617 211 LDERNSLSY-PGLPARYVLHSVDAFV-DGLPE 240 (281)
Q Consensus 211 ~e~r~S~SY-PGL~vryvLh~v~a~V-~GlPe 240 (281)
.+.+ ++ ..+.++.+.|.. .|.+.
T Consensus 77 -----~~~~~~~--~~~~~~~~~~~~~~~~~~ 101 (155)
T 2b06_A 77 -----NWPLDTG--GRYIVICYKATEFSGTLQ 101 (155)
T ss_dssp -----EEECTTS--CEEEEEEEEECEEEECCC
T ss_pred -----eeccCCC--ceEEEEEEEEEecCCCCC
Confidence 1112 23 347777887864 44443
No 39
>2yvp_A NDX2, MUTT/nudix family protein; nudix protein, ADP-ribose, FAD, hydrol structural genomics, NPPSFA; HET: RBY; 1.66A {Thermus thermophilus} PDB: 2yvn_A 2yvm_A* 2yvo_A*
Probab=99.46 E-value=8.3e-14 Score=113.47 Aligned_cols=59 Identities=22% Similarity=0.218 Sum_probs=50.6
Q ss_pred EEEEEEEEecCCcEEEEeecccCCCcccccCCCCCcccCCCCCHHHHHHHHHHHHhCcccc
Q 048617 135 NVVTVRIIGKDNQILVESHQELSDGSVRNRCRPLAEKMKSNETPEEAVIRAVKEELGSILN 195 (281)
Q Consensus 135 ~Vvva~I~~~~GriLIe~RqefpgG~vR~RWEfPGGKvepGEt~eeAl~REi~EELGi~v~ 195 (281)
..|+++|++.+|++|+.+|.. .+...+.|+||||++++|||+++|+.||++||+|+.+.
T Consensus 42 ~~v~v~i~~~~~~vLL~~r~~--~~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~ 100 (182)
T 2yvp_A 42 AASFVLPVTERGTALLVRQYR--HPTGKFLLEVPAGKVDEGETPEAAARRELREEVGAEAE 100 (182)
T ss_dssp EEEEEEEBCTTSEEEEEEEEE--GGGTEEEEECCEEECCTTCCHHHHHHHHHHHHHCEECS
T ss_pred CEEEEEEEcCCCEEEEEEecc--CCCCCcEEEeccccCCCCcCHHHHHHHHHHHHhCCCcc
Confidence 466677778999999988863 34446789999999999999999999999999999976
No 40
>3o8s_A Nudix hydrolase, ADP-ribose pyrophosphatase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.27A {Streptococcus suis}
Probab=99.46 E-value=1.5e-13 Score=116.28 Aligned_cols=85 Identities=15% Similarity=0.133 Sum_probs=59.3
Q ss_pred EEEEecCCcEEEEeecccCCCcccccCCCCCcccCCCCCHHHHHHHHHHHHhCccccCCceEEeeCCCcccccccccCCC
Q 048617 139 VRIIGKDNQILVESHQELSDGSVRNRCRPLAEKMKSNETPEEAVIRAVKEELGSILNDSITVRIVPGSYSKKLDERNSLS 218 (281)
Q Consensus 139 a~I~~~~GriLIe~RqefpgG~vR~RWEfPGGKvepGEt~eeAl~REi~EELGi~v~~~~~V~Vl~gsy~~~~e~r~S~S 218 (281)
|+|++ +|+||+.+|. .+.|.||||++++|||+++|+.||++||+|+.+.....+.+ .....+.
T Consensus 75 ~vv~~-~~~vLLvrr~-------~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~l~~---------~~~~~~~ 137 (206)
T 3o8s_A 75 AAIFQ-EDKILLVQEN-------DGLWSLPGGWCDVDQSVKDNVVKEVKEEAGLDVEAQRVVAI---------LDKHKNN 137 (206)
T ss_dssp EEEEE-TTEEEEEECT-------TSCEECSEEECCTTSCHHHHHHHHHHHHHCEEEEEEEEEEE---------EEHHHHC
T ss_pred EEEEE-CCEEEEEEec-------CCeEECCeeccCCCCCHHHHHHHHHHHHHCCcceeeeEEEE---------EeccccC
Confidence 33444 5899999886 56899999999999999999999999999999864322221 2233356
Q ss_pred CCCCccEEEEEEEEEEe-cCCCC
Q 048617 219 YPGLPARYVLHSVDAFV-DGLPE 240 (281)
Q Consensus 219 YPGL~vryvLh~v~a~V-~GlPe 240 (281)
+++....+..+.+.|.+ .|.+.
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~ 160 (206)
T 3o8s_A 138 PAKSAHRVTKVFILCRLLGGEFQ 160 (206)
T ss_dssp C-----CEEEEEEEEEEEEECCC
T ss_pred CCCCCceEEEEEEEEEecCCeec
Confidence 67655557777888876 55554
No 41
>3q1p_A Phosphohydrolase (MUTT/nudix family protein); asymmetric dimer, RNA exonuclease, CDP-CHO pyrophosphatase; 1.80A {Bacillus cereus} PDB: 3q4i_A
Probab=99.45 E-value=2.6e-13 Score=114.70 Aligned_cols=88 Identities=13% Similarity=0.107 Sum_probs=62.6
Q ss_pred EEEEEEecCCcEEEEeecccCCCcccccCCCCCcccCCCCCHHHHHHHHHHHHhCccccCCceEEeeCCCcccccccccC
Q 048617 137 VTVRIIGKDNQILVESHQELSDGSVRNRCRPLAEKMKSNETPEEAVIRAVKEELGSILNDSITVRIVPGSYSKKLDERNS 216 (281)
Q Consensus 137 vva~I~~~~GriLIe~RqefpgG~vR~RWEfPGGKvepGEt~eeAl~REi~EELGi~v~~~~~V~Vl~gsy~~~~e~r~S 216 (281)
|.|+|.+ +|+||+.+|. . .+.|.+|||++++|||+++|+.||++||+|+.+.....+.+ .....
T Consensus 71 v~~vv~~-~~~vLLv~r~--~----~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~v~~~~~l~~---------~~~~~ 134 (205)
T 3q1p_A 71 IRAVVFQ-NEKLLFVKEK--S----DGKWALPGGWADVGYTPTEVAAKEVFEETGYEVDHFKLLAI---------FDKEK 134 (205)
T ss_dssp EEEEEEE-TTEEEEEEC---------CCEECSEEECCTTCCHHHHHHHHHHHHHSEEEEEEEEEEE---------EEHHH
T ss_pred EEEEEEE-CCEEEEEEEc--C----CCcEECCcCccCCCCCHHHHHHHHHHHHHCCccccceEEEE---------Eeccc
Confidence 3344555 7899999886 2 45899999999999999999999999999999874322221 22333
Q ss_pred CCCCCCccEEEEEEEEEEe-cCCCC
Q 048617 217 LSYPGLPARYVLHSVDAFV-DGLPE 240 (281)
Q Consensus 217 ~SYPGL~vryvLh~v~a~V-~GlPe 240 (281)
+.||+....+..+.+.|.+ .|.+.
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (205)
T 3q1p_A 135 HQPSPSATHVYKIFIGCEIIGGEKK 159 (205)
T ss_dssp HSCCCCSSCEEEEEEEEEEEEECCC
T ss_pred cCCCCCCceEEEEEEEEEecCCccC
Confidence 4566665667777888876 55554
No 42
>1f3y_A Diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase; enzyme,mixed 4-stranded beta sheet, 2-stranded antiparallel sheet; NMR {Lupinus angustifolius} SCOP: d.113.1.1 PDB: 1jkn_A*
Probab=99.45 E-value=5.4e-14 Score=110.39 Aligned_cols=55 Identities=22% Similarity=0.385 Sum_probs=47.3
Q ss_pred EEEEEEEecCCcEEEEeecccCCCcccccCCCCCcccCCCCCHHHHHHHHHHHHhCcccc
Q 048617 136 VVTVRIIGKDNQILVESHQELSDGSVRNRCRPLAEKMKSNETPEEAVIRAVKEELGSILN 195 (281)
Q Consensus 136 Vvva~I~~~~GriLIe~RqefpgG~vR~RWEfPGGKvepGEt~eeAl~REi~EELGi~v~ 195 (281)
.|+++|++++|+||+.+|..++ ++|.+|||++++|||+++|+.||++||+|+.+.
T Consensus 16 ~v~~~i~~~~~~vLl~~r~~~~-----g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~ 70 (165)
T 1f3y_A 16 NVGICLMNNDKKIFAASRLDIP-----DAWQMPQGGIDEGEDPRNAAIRELREETGVTSA 70 (165)
T ss_dssp EEEEEEECTTSCEEEEEETTEE-----EEEECCEEECCTTCCHHHHHHHHHHHHHCCCSE
T ss_pred eEEEEEECCCCcEEEEecCCCC-----CcEECCeeccCCCCCHHHHHHHHHHHhhCCChh
Confidence 3445577889999999987432 689999999999999999999999999999874
No 43
>1k2e_A Nudix homolog; nudix/MUTT-like fold, mixed alpha/beta, dimer, putative NUDI hydrolase, structural genomics, unknown function; 1.80A {Pyrobaculum aerophilum} SCOP: d.113.1.1 PDB: 1jrk_A 1k26_A
Probab=99.45 E-value=5.4e-14 Score=112.28 Aligned_cols=54 Identities=26% Similarity=0.362 Sum_probs=46.9
Q ss_pred EEEEEEEecCCcEEEEeecccCCCcccccCCCCCcccCCCCCHHHHHHHHHHHHhCccccC
Q 048617 136 VVTVRIIGKDNQILVESHQELSDGSVRNRCRPLAEKMKSNETPEEAVIRAVKEELGSILND 196 (281)
Q Consensus 136 Vvva~I~~~~GriLIe~RqefpgG~vR~RWEfPGGKvepGEt~eeAl~REi~EELGi~v~~ 196 (281)
+|+|+|.+ +|++|+.+|.. .+.|.+|||++|+|||+++|+.||++||+|+.+..
T Consensus 3 ~~~~vi~~-~~~vLL~~r~~------~g~W~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~ 56 (156)
T 1k2e_A 3 VTSGVLVE-NGKVLLVKHKR------LGVYIYPGGHVEHNETPIEAVKREFEEETGIVVEP 56 (156)
T ss_dssp EEEEECEE-TTEEEEEECTT------TCSEECSEEECCTTCCHHHHHHHHHHHHHSEEEEE
T ss_pred EEEEEEEE-CCEEEEEEEcC------CCcEECCeeecCCCCCHHHHHHHHHHHHHCCccee
Confidence 55666666 88999998862 46899999999999999999999999999999874
No 44
>2kdv_A RNA pyrophosphohydrolase; nudix family, magnesium, manganese, zinc; NMR {Escherichia coli} PDB: 2kdw_A
Probab=99.45 E-value=4.6e-13 Score=109.07 Aligned_cols=55 Identities=20% Similarity=0.260 Sum_probs=47.5
Q ss_pred EEEEEEEecCCcEEEEeecccCCCcccccCCCCCcccCCCCCHHHHHHHHHHHHhCccccC
Q 048617 136 VVTVRIIGKDNQILVESHQELSDGSVRNRCRPLAEKMKSNETPEEAVIRAVKEELGSILND 196 (281)
Q Consensus 136 Vvva~I~~~~GriLIe~RqefpgG~vR~RWEfPGGKvepGEt~eeAl~REi~EELGi~v~~ 196 (281)
.|+++|++.+|++|+.+|.. .+.|.+|||++++|||+++|+.||++||+|+.+..
T Consensus 10 ~v~~~i~~~~~~vLl~~r~~------~~~w~~p~G~~e~gE~~~~aa~RE~~EE~G~~~~~ 64 (164)
T 2kdv_A 10 NVGIVICNRQGQVMWARRFG------QHSWQFPQGGINPGESAEQAMYRELFEEVGLSRKD 64 (164)
T ss_dssp EEEEEEECTTSEEEEEEETT------CCCEECCEEECCTTCCHHHHHHHHHHHHHCCCGGG
T ss_pred EEEEEEEccCCEEEEEEEcC------CCeEECCeeecCCCCCHHHHHHHHHHHHHCCCccc
Confidence 34456778899999998862 46899999999999999999999999999999874
No 45
>2jvb_A Protein PSU1, mRNA-decapping enzyme subunit 2; DCP2, mRNA decay, cytoplasm, hydrolase, manganese, metal-binding, mRNA processing; NMR {Saccharomyces cerevisiae}
Probab=99.43 E-value=7e-14 Score=109.02 Aligned_cols=58 Identities=24% Similarity=0.342 Sum_probs=50.3
Q ss_pred eEEEEEEEEEEecC-CcEEEEeecccCCCcccccCCCCCcccCCCCCHHHHHHHHHHHHhCcccc
Q 048617 132 RTVNVVTVRIIGKD-NQILVESHQELSDGSVRNRCRPLAEKMKSNETPEEAVIRAVKEELGSILN 195 (281)
Q Consensus 132 R~V~Vvva~I~~~~-GriLIe~RqefpgG~vR~RWEfPGGKvepGEt~eeAl~REi~EELGi~v~ 195 (281)
+.|++++|+|++++ |+||+.+|. . .+.|.+|||++++|||+++|+.||++||+|+.+.
T Consensus 2 ~~i~~~~~~i~~~~~~~vLl~~r~--~----~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~~ 60 (146)
T 2jvb_A 2 KSIPVRGAAIFNENLSKILLVQGT--E----SDSWSFPRGKISKDENDIDCCIREVKEEIGFDLT 60 (146)
T ss_dssp CCSCCEEEEEBCTTSSEEEEECCS--S----SSCCBCCEECCCSSSCHHHHHHHHHHHHTSCCCS
T ss_pred ceeEEEEEEEEeCCCCEEEEEEEc--C----CCcEECCcccCCCCCCHHHHHHHHHHHHHCCCch
Confidence 45667888888876 999998875 2 3689999999999999999999999999999876
No 46
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=99.42 E-value=3.4e-13 Score=120.23 Aligned_cols=60 Identities=18% Similarity=0.160 Sum_probs=50.0
Q ss_pred EEEEEEEEEEecCCcEEEEeecccCCCcccccCCCCCcccCCCCCHHHHHHHHHHHHhCcccc
Q 048617 133 TVNVVTVRIIGKDNQILVESHQELSDGSVRNRCRPLAEKMKSNETPEEAVIRAVKEELGSILN 195 (281)
Q Consensus 133 ~V~Vvva~I~~~~GriLIe~RqefpgG~vR~RWEfPGGKvepGEt~eeAl~REi~EELGi~v~ 195 (281)
.+++++++|+.++|+||+.+|...+ -.+.|.+|||++|+|||+++|+.||++||+|+.+.
T Consensus 206 ~~~~~v~~vv~~~~~vLL~~r~~~~---~~g~w~lPgG~ve~gEt~~~aa~REl~EEtGl~v~ 265 (352)
T 2qjt_B 206 PNFVTVDALVIVNDHILMVQRKAHP---GKDLWALPGGFLECDETIAQAIIRELFEETNINLT 265 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEESSSS---STTCEECSEEECCTTSCHHHHHHHHHHHHHCCSCC
T ss_pred CCceEEEEEEEECCEEEEEEEcCCC---CCCeEECCCCcCCCCCCHHHHHHHHHHHhhCCCcc
Confidence 3455555555578999999987433 25789999999999999999999999999999976
No 47
>1v8y_A ADP-ribose pyrophosphatase; nudix motif, loop-helix-loop, MUTT family, riken structural genomics/proteomics initiative, RSGI; HET: APR; 1.65A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1v8v_A* 1v8n_A 1v8l_A* 1v8m_A* 1v8i_A 1v8r_A* 1v8s_A* 1v8t_A* 1v8w_A 1v8u_A
Probab=99.41 E-value=8.3e-13 Score=106.77 Aligned_cols=56 Identities=20% Similarity=0.186 Sum_probs=46.3
Q ss_pred EEEEEEEecCCcEEEEeecccCCCcccccCCCCCcccCCCCCHHHHHHHHHHHHhCcccc
Q 048617 136 VVTVRIIGKDNQILVESHQELSDGSVRNRCRPLAEKMKSNETPEEAVIRAVKEELGSILN 195 (281)
Q Consensus 136 Vvva~I~~~~GriLIe~RqefpgG~vR~RWEfPGGKvepGEt~eeAl~REi~EELGi~v~ 195 (281)
.|+++|++ +|++|+.+|.+ .+...+.|+||||++++|||+++|+.||++||+|+ +.
T Consensus 36 ~v~vii~~-~~~vLL~~~~r--~~~~~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl-~~ 91 (170)
T 1v8y_A 36 AVAVIALR-EGRMLFVRQMR--PAVGLAPLEIPAGLIEPGEDPLEAARRELAEQTGL-SG 91 (170)
T ss_dssp EEEEEEEE-TTEEEEEECCB--TTTTBCCBBCSEEECCTTCCHHHHHHHHHHHHHSE-EE
T ss_pred eEEEEEEE-CCEEEEEEEEe--CCCCCCEEECCccccCCCCCHHHHHHHHHHHHHCC-Cc
Confidence 44555667 89999987753 23446789999999999999999999999999999 65
No 48
>3u53_A BIS(5'-nucleosyl)-tetraphosphatase [asymmetrical]; hydrolase; 2.71A {Homo sapiens} PDB: 1xsa_A 1xsb_A 1xsc_A*
Probab=99.41 E-value=5.2e-13 Score=106.49 Aligned_cols=49 Identities=20% Similarity=0.293 Sum_probs=42.6
Q ss_pred ecCCcEEEEeecccCCCcccccCCCCCcccCCCCCHHHHHHHHHHHHhCccccC
Q 048617 143 GKDNQILVESHQELSDGSVRNRCRPLAEKMKSNETPEEAVIRAVKEELGSILND 196 (281)
Q Consensus 143 ~~~GriLIe~RqefpgG~vR~RWEfPGGKvepGEt~eeAl~REi~EELGi~v~~ 196 (281)
|+++++|+-+|. +| .+.|.||||++++|||+.+|+.||++||+|+.+..
T Consensus 21 n~~~e~LL~~r~---~~--~~~W~lPgG~ve~gEt~~~aa~REl~EEtGl~~~~ 69 (155)
T 3u53_A 21 NNAIEFLLLQAS---DG--IHHWTPPKGHVEPGEDDLETALRETQEEAGIEAGQ 69 (155)
T ss_dssp SCSEEEEEEEES---SS--SCCEECSEEECCSSCCHHHHHHHHHHHHHCCCGGG
T ss_pred CCCcEEEEEEec---CC--CCCEECCeeeccCCCCHHHHHHHHHHHHHCCcccc
Confidence 567799999886 22 25799999999999999999999999999999874
No 49
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=99.39 E-value=4.1e-13 Score=118.67 Aligned_cols=62 Identities=19% Similarity=0.124 Sum_probs=50.8
Q ss_pred eEEEEEEEEEEecCCcEEEEeecccCCCcccccCCCCCcccCCCCCHHHHHHHHHHHHhCccccC
Q 048617 132 RTVNVVTVRIIGKDNQILVESHQELSDGSVRNRCRPLAEKMKSNETPEEAVIRAVKEELGSILND 196 (281)
Q Consensus 132 R~V~Vvva~I~~~~GriLIe~RqefpgG~vR~RWEfPGGKvepGEt~eeAl~REi~EELGi~v~~ 196 (281)
..+++++++|+..+|++|+.+|...+ ..+.|.+|||++|+|||+++|+.||++||+|+.+..
T Consensus 200 ~~~~~~v~~vi~~~~~vLL~~r~~~~---~~g~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~ 261 (341)
T 2qjo_A 200 APTFITTDAVVVQAGHVLMVRRQAKP---GLGLIALPGGFIKQNETLVEGMLRELKEETRLKVPL 261 (341)
T ss_dssp CCCEEEEEEEEEETTEEEEEECCSSS---STTCEECSEEECCTTSCHHHHHHHHHHHHHCCSSCH
T ss_pred CCCceEEEEEEEeCCEEEEEEecCCC---CCCeEECCCCcCCCCCCHHHHHHHHHhhhhCCcccc
Confidence 33456666565678999999886422 267899999999999999999999999999999873
No 50
>2fvv_A Diphosphoinositol polyphosphate phosphohydrolase 1; nudix, inositol polyphosphate metabolism, structural genomics, structural genomics consortium; HET: IHP; 1.25A {Homo sapiens} SCOP: d.113.1.1 PDB: 2q9p_A* 2duk_A 3mcf_A*
Probab=99.39 E-value=3.4e-13 Score=114.03 Aligned_cols=58 Identities=21% Similarity=0.208 Sum_probs=46.4
Q ss_pred EEEEEEEEE-ecCCcEEEEeecccCCCcccccCCCCCcccCCCCCHHHHHHHHHHHHhCccccC
Q 048617 134 VNVVTVRII-GKDNQILVESHQELSDGSVRNRCRPLAEKMKSNETPEEAVIRAVKEELGSILND 196 (281)
Q Consensus 134 V~Vvva~I~-~~~GriLIe~RqefpgG~vR~RWEfPGGKvepGEt~eeAl~REi~EELGi~v~~ 196 (281)
+.++++++. +.+|+||+.+|...+ +.|++|||++|+|||+++|++||++||+|+.+..
T Consensus 41 ~~~~~vi~~~~~~~~vLLv~r~~~~-----g~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~~ 99 (194)
T 2fvv_A 41 KRAACLCFRSESEEEVLLVSSSRHP-----DRWIVPGGGMEPEEEPSVAAVREVCEEAGVKGTL 99 (194)
T ss_dssp EEEEEEEESSTTCCEEEEEECSSCT-----TSEECSEEECCTTCCHHHHHHHHHHHHHCEEEEE
T ss_pred ccEEEEEEEECCCCEEEEEEEeCCC-----CcEECCCCcCCCCcCHHHHHHHHHHHHhCCcccc
Confidence 344444442 457899999886332 5899999999999999999999999999999763
No 51
>1nqz_A COA pyrophosphatase (MUTT/nudix family protein); D.radiodurans, hydrolase; 1.70A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1nqy_A
Probab=99.39 E-value=1e-12 Score=108.24 Aligned_cols=61 Identities=13% Similarity=0.195 Sum_probs=46.9
Q ss_pred EEEEEEEecCC--cEEEEeecccCCCcccccCCCCCcccCCCCCHHHHHHHHHHHHhCccccCC
Q 048617 136 VVTVRIIGKDN--QILVESHQELSDGSVRNRCRPLAEKMKSNETPEEAVIRAVKEELGSILNDS 197 (281)
Q Consensus 136 Vvva~I~~~~G--riLIe~RqefpgG~vR~RWEfPGGKvepGEt~eeAl~REi~EELGi~v~~~ 197 (281)
.+++++++.+| ++|+.+|..- .+...+.|.||||++++|||+++|+.||++||+|+.+...
T Consensus 36 ~~~~v~i~~~~~~~vLL~~r~~~-~~~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~ 98 (194)
T 1nqz_A 36 AAVLVALTREADPRVLLTVRSSE-LPTHKGQIAFPGGSLDAGETPTQAALREAQEEVALDPAAV 98 (194)
T ss_dssp EEEEEEEESSSSCBBCEEEEC-------CCCEECSEEECCTTCCHHHHHHHHHHHHHCCCGGGC
T ss_pred EEEEEEEecCCCeEEEEEEecCC-CCCCCCeEECCcccCCCCCCHHHHHHHHHHHHHCCCccce
Confidence 34444458888 9999988621 1335678999999999999999999999999999998743
No 52
>3e57_A Uncharacterized protein TM1382; structural genomics, nudix hydrolase, PSI-2, protein structure initiative; 1.89A {Thermotoga maritima}
Probab=99.39 E-value=2e-13 Score=120.25 Aligned_cols=59 Identities=17% Similarity=0.348 Sum_probs=42.6
Q ss_pred EEEEEEEecCCcEEEEeecccCCC---cccccCCC-CCcccCCCCC--H----HHHHHHHHHHHhCccccC
Q 048617 136 VVTVRIIGKDNQILVESHQELSDG---SVRNRCRP-LAEKMKSNET--P----EEAVIRAVKEELGSILND 196 (281)
Q Consensus 136 Vvva~I~~~~GriLIe~RqefpgG---~vR~RWEf-PGGKvepGEt--~----eeAl~REi~EELGi~v~~ 196 (281)
+++++|+.++|++|+.+|. .++ .+.+.|.+ ||||||+||| + ++|++|||+||||+.+..
T Consensus 69 ~i~~~II~~~grvLl~~R~--~~~~e~~~~g~w~~gPGGhVE~GEs~~p~EtleeAa~REl~EEtGl~v~~ 137 (211)
T 3e57_A 69 VIPYVVIMDGDRVLITKRT--TKQSEKRLHNLYSLGIGGHVREGDGATPREAFLKGLEREVNEEVDVSLRE 137 (211)
T ss_dssp EEEEEEEEETTEEEEEEC--------------CBSSEECCCBGGGCSSHHHHHHHHHHHHHHHHEEEEEEE
T ss_pred eEEEEEEEECCEEEEEEEC--CCCCcccccCCcccccceEEeCCCCCCchhhHHHHHHHHHHHHhCCeeec
Confidence 3344455668999999997 332 36778888 9999999999 5 999999999999998763
No 53
>1mk1_A ADPR pyrophosphatase; nudix hydrolase, adprase, adenosine DI ribose, RV1700, hydrolase; HET: APR; 2.00A {Mycobacterium tuberculosis} SCOP: d.113.1.1 PDB: 1mp2_A 1mqe_A* 1mqw_A* 1mr2_A*
Probab=99.38 E-value=3.8e-13 Score=113.56 Aligned_cols=89 Identities=15% Similarity=0.116 Sum_probs=63.0
Q ss_pred EEEEEEEEecCCcEEEEeecccCCCcccccCCCCCcccC-CCCCHHHHHHHHHHHHhCccccCCceEEeeCCCccccccc
Q 048617 135 NVVTVRIIGKDNQILVESHQELSDGSVRNRCRPLAEKMK-SNETPEEAVIRAVKEELGSILNDSITVRIVPGSYSKKLDE 213 (281)
Q Consensus 135 ~Vvva~I~~~~GriLIe~RqefpgG~vR~RWEfPGGKve-pGEt~eeAl~REi~EELGi~v~~~~~V~Vl~gsy~~~~e~ 213 (281)
..|+++|++++|++|+.+|.+. +..++.|+||||+++ +|||+++|+.||++||+|+.+... ..+ +
T Consensus 44 ~av~v~i~~~~~~vLLvrr~r~--~~~~~~w~lPgG~ve~~gEs~~~aa~REl~EEtGl~~~~~---~~l-~-------- 109 (207)
T 1mk1_A 44 GAVAIVAMDDNGNIPMVYQYRH--TYGRRLWELPAGLLDVAGEPPHLTAARELREEVGLQASTW---QVL-V-------- 109 (207)
T ss_dssp CEEEEEECCTTSEEEEEEEEET--TTTEEEEECCEEECCSTTCCHHHHHHHHHHHHHCEEEEEE---EEE-E--------
T ss_pred CEEEEEEEcCCCEEEEEEeecC--CCCCcEEEeCCccccCCCCCHHHHHHHHHHHHHCCccccc---EEE-E--------
Confidence 3556667788999999887633 334678999999999 999999999999999999997622 222 1
Q ss_pred ccCCCCCCCccEEEEEEEEEEe-cCCC
Q 048617 214 RNSLSYPGLPARYVLHSVDAFV-DGLP 239 (281)
Q Consensus 214 r~S~SYPGL~vryvLh~v~a~V-~GlP 239 (281)
.. +.+|+... ..+|.|.|.. .+.+
T Consensus 110 ~~-~~~~~~~~-~~~~~f~~~~~~~~~ 134 (207)
T 1mk1_A 110 DL-DTAPGFSD-ESVRVYLATGLREVG 134 (207)
T ss_dssp EE-CSCTTTBC-CCEEEEEEEEEEECC
T ss_pred EE-EcCCCccc-cEEEEEEEEccccCC
Confidence 11 45676642 2455666664 4433
No 54
>3i9x_A MUTT/nudix family protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.20A {Listeria innocua}
Probab=99.36 E-value=4.1e-12 Score=104.66 Aligned_cols=66 Identities=15% Similarity=0.068 Sum_probs=50.6
Q ss_pred eEEEEEEEEEEec----CCcEEEEeeccc----CCCcccccCCCCCcccCCCCCHHHHHHHHHHHHhCccccCC
Q 048617 132 RTVNVVTVRIIGK----DNQILVESHQEL----SDGSVRNRCRPLAEKMKSNETPEEAVIRAVKEELGSILNDS 197 (281)
Q Consensus 132 R~V~Vvva~I~~~----~GriLIe~Rqef----pgG~vR~RWEfPGGKvepGEt~eeAl~REi~EELGi~v~~~ 197 (281)
-.|.+++..+.+. +++||+.+|... ..+.-.+.|.+|||++++|||+++|++||++||+|+.+...
T Consensus 28 ~~v~~vv~~~~~~~~~~~~~vLL~~r~~~~~~g~~~~~~g~w~lPGG~ve~gEs~~~aa~REl~EEtGl~~~~~ 101 (187)
T 3i9x_A 28 YTSDMILTTVKELNGKPTLHILLIKRSLTNAEGKPNMEGGKWAVPGGFVDENESAEQAAERELEEETSLTDIPL 101 (187)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEEEECCSBCTTSSBCTTTTCEECSEEECCTTSCHHHHHHHHHHHHHCCCSCCC
T ss_pred ceEEEEEEEEcCCCCCCCCEEEEEEEccccccccCCCCCCEEECCceeCCCCCCHHHHHHHHHHHHHCCCCcce
Confidence 3455555445555 679999988522 12345678999999999999999999999999999987644
No 55
>2azw_A MUTT/nudix family protein; MUTT/nudix ,enterococcus faecalis, structural genomics, PSI, structure initiative; HET: 1PE; 1.90A {Enterococcus faecalis} SCOP: d.113.1.1
Probab=99.36 E-value=7.7e-13 Score=102.41 Aligned_cols=53 Identities=23% Similarity=0.267 Sum_probs=45.0
Q ss_pred EEEEEEec-CCcEEEEeecccCCCcccccCCCCCcccCCCCCHHHHHHHHHHHHhCccccC
Q 048617 137 VTVRIIGK-DNQILVESHQELSDGSVRNRCRPLAEKMKSNETPEEAVIRAVKEELGSILND 196 (281)
Q Consensus 137 vva~I~~~-~GriLIe~RqefpgG~vR~RWEfPGGKvepGEt~eeAl~REi~EELGi~v~~ 196 (281)
|+++|.+. +|++|+.+|. + +.|.||||++++|||+++|+.||++||+|+.+..
T Consensus 21 ~~~vi~~~~~~~vLl~~r~---~----g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~ 74 (148)
T 2azw_A 21 AYIIVSKPENNTMVLVQAP---N----GAYFLPGGEIEGTETKEEAIHREVLEELGISVEI 74 (148)
T ss_dssp EEEECEEGGGTEEEEEECT---T----SCEECSEEECCTTCCHHHHHHHHHHHHHSEEEEE
T ss_pred EEEEEECCCCCeEEEEEcC---C----CCEeCCCcccCCCCCHHHHHHHHHHHHhCCeeEe
Confidence 34555555 7999999874 2 5899999999999999999999999999999863
No 56
>1vk6_A NADH pyrophosphatase; 1790429, structural genomics, JCSG, PS protein structure initiative, joint center for structural G hydrolase; HET: MSE; 2.20A {Escherichia coli} SCOP: d.113.1.4 d.113.1.4 g.41.14.1 PDB: 2gb5_A
Probab=99.35 E-value=1.4e-12 Score=117.24 Aligned_cols=99 Identities=21% Similarity=0.234 Sum_probs=67.8
Q ss_pred CChhhHHHhhcCCCCCCCccccCCCCCcccHhHHHHHhhcCceee-ecCCCC--eeEEEEEEEEEEecCCcEEEEeeccc
Q 048617 80 ATPQSLSDWLKPRLPSDSFASWGVKPGTKNVHNLWLELSDGETCL-ADAIPP--VRTVNVVTVRIIGKDNQILVESHQEL 156 (281)
Q Consensus 80 ~~~~sL~~wLk~rl~~~~~~~wG~~pgtK~v~~L~~El~~get~L-~ds~~p--~R~V~Vvva~I~~~~GriLIe~Rqef 156 (281)
+++.+|..|.+.. .|=-.=|+++.. .+++... -.+..- -..+.++++++++.+|+||+.+|...
T Consensus 95 ~~a~~l~~w~~~~-------~fC~~CG~~~~~------~~~~~~~~C~~C~~~~yp~~~~~viv~v~~~~~vLL~rr~~~ 161 (269)
T 1vk6_A 95 GRGVQLAEFYRSH-------KYCGYCGHEMYP------SKTEWAMLCSHCRERYYPQIAPCIIVAIRRDDSILLAQHTRH 161 (269)
T ss_dssp HHHHHHHHHHHTT-------SBCTTTCCBEEE------CSSSSCEEESSSSCEECCCCEEEEEEEEEETTEEEEEEETTT
T ss_pred HHHHHHHhhhhcC-------CccccCCCcCcc------CCCceeeeCCCCCCEecCCCCcEEEEEEEeCCEEEEEEecCC
Confidence 5688899999876 332234444432 1233222 122111 11134455556667889999999865
Q ss_pred CCCcccccCCCCCcccCCCCCHHHHHHHHHHHHhCcccc
Q 048617 157 SDGSVRNRCRPLAEKMKSNETPEEAVIRAVKEELGSILN 195 (281)
Q Consensus 157 pgG~vR~RWEfPGGKvepGEt~eeAl~REi~EELGi~v~ 195 (281)
+ .+.|.+|||+||+|||+++|+.||++||+|+.+.
T Consensus 162 ~----~g~w~lPgG~vE~GEt~eeAa~REv~EEtGl~v~ 196 (269)
T 1vk6_A 162 R----NGVHTVLAGFVEVGETLEQAVAREVMEESGIKVK 196 (269)
T ss_dssp C----SSCCBCEEEECCTTCCHHHHHHHHHHHHHCCEEE
T ss_pred C----CCcEECCcCcCCCCCCHHHHHHHHHHHHhCceee
Confidence 4 4689999999999999999999999999999986
No 57
>3fcm_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, 11180J, structural genomics; 2.20A {Clostridium perfringens atcc 13124}
Probab=99.35 E-value=6.6e-13 Score=110.52 Aligned_cols=80 Identities=14% Similarity=0.152 Sum_probs=54.7
Q ss_pred cccHhHHHHHhhcCceeeecCCCCeeEEEEEEEEEEecCC-cEEEEeecccCCCcccccCCCCCcccCCCCCHHHHHHHH
Q 048617 107 TKNVHNLWLELSDGETCLADAIPPVRTVNVVTVRIIGKDN-QILVESHQELSDGSVRNRCRPLAEKMKSNETPEEAVIRA 185 (281)
Q Consensus 107 tK~v~~L~~El~~get~L~ds~~p~R~V~Vvva~I~~~~G-riLIe~RqefpgG~vR~RWEfPGGKvepGEt~eeAl~RE 185 (281)
-+...+.++++....-..-........+ +|+|+|++.+| +||+.+|. . .+.|.+|||++|+|||+++|++||
T Consensus 19 e~~~~~~~~~~~~~~~~~~~r~~~~~h~-~~~~vv~~~~~~~vLL~~r~--~----~g~w~lPgG~ve~gEs~~eaa~RE 91 (197)
T 3fcm_A 19 EERDKELFLRCLNDFHDILTRDNTIAHL-TSSAFAVNKERNKFLMIHHN--I----YNSWAWTGGHSDNEKDQLKVAIKE 91 (197)
T ss_dssp HHHHHHHHHHHHHHCSCSSSTTCSSEEE-EEEEEEECTTSCEEEEEEET--T----TTEEECEEEECTTCCBHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCccccccCCCccE-EEEEEEEECCCCEEEEEEec--C----CCCEECCccccCCCCCHHHHHHHH
Confidence 3444455555554432222222222223 44455667765 99998876 2 348999999999999999999999
Q ss_pred HHHHhCcc
Q 048617 186 VKEELGSI 193 (281)
Q Consensus 186 i~EELGi~ 193 (281)
++||+|+.
T Consensus 92 l~EEtGl~ 99 (197)
T 3fcm_A 92 LKEETGVK 99 (197)
T ss_dssp HHHHHCCS
T ss_pred HHHHHCCC
Confidence 99999998
No 58
>2fb1_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; 2.50A {Bacteroides thetaiotaomicron} SCOP: a.4.5.68 d.113.1.6
Probab=99.34 E-value=4.6e-12 Score=109.59 Aligned_cols=50 Identities=12% Similarity=0.088 Sum_probs=44.0
Q ss_pred ecCCcEEEEeecccCCCcccccCCCCCcccCCCCCHHHHHHHHHHHHhCcccc
Q 048617 143 GKDNQILVESHQELSDGSVRNRCRPLAEKMKSNETPEEAVIRAVKEELGSILN 195 (281)
Q Consensus 143 ~~~GriLIe~RqefpgG~vR~RWEfPGGKvepGEt~eeAl~REi~EELGi~v~ 195 (281)
+.+++||+.+|.. ....+.|.+|||++++|||+++|+.||++||+|+.+.
T Consensus 25 ~~~~~vLLv~r~~---~~~~g~w~lPGG~ve~gEs~~~Aa~REl~EEtGl~~~ 74 (226)
T 2fb1_A 25 EGEISLLLLKRNF---EPAMGEWSLMGGFVQKDESVDDAAKRVLAELTGLENV 74 (226)
T ss_dssp TTEEEEEEEECSS---SSSTTCEECEEEECCTTSCHHHHHHHHHHHHHCCCSC
T ss_pred CCCCEEEEEECcC---CCCCCCEECCeeccCCCCCHHHHHHHHHHHHHCCCCC
Confidence 5678999998863 2246789999999999999999999999999999976
No 59
>1vhz_A ADP compounds hydrolase NUDE; structural genomics; HET: APR; 2.32A {Escherichia coli} SCOP: d.113.1.1 PDB: 1vhg_A*
Probab=99.32 E-value=2.5e-12 Score=108.57 Aligned_cols=52 Identities=23% Similarity=0.171 Sum_probs=43.4
Q ss_pred EEecCCcEEEEeecccCCCcccccCCCCCcccCCCCCHHHHHHHHHHHHhCcccc
Q 048617 141 IIGKDNQILVESHQELSDGSVRNRCRPLAEKMKSNETPEEAVIRAVKEELGSILN 195 (281)
Q Consensus 141 I~~~~GriLIe~RqefpgG~vR~RWEfPGGKvepGEt~eeAl~REi~EELGi~v~ 195 (281)
+++++ ++|+.+|.+ .+.-++.|++|||++++|||+++|++||++||+|+.+.
T Consensus 56 ~~~~~-~vLLvrq~r--~~~~~~~welPgG~ve~gEs~~~aA~REl~EEtGl~~~ 107 (198)
T 1vhz_A 56 PIVDD-HLILIREYA--VGTESYELGFSKGLIDPGESVYEAANRELKEEVGFGAN 107 (198)
T ss_dssp EEETT-EEEEEEEEE--TTTTEEEEECEEEECCTTCCHHHHHHHHHHHHHSEEEE
T ss_pred EEECC-EEEEEEccc--CCCCCcEEEeCcccCCCCcCHHHHHHHHHHHHHCCCcC
Confidence 35555 999887653 33346789999999999999999999999999999976
No 60
>1g0s_A Hypothetical 23.7 kDa protein in ICC-TOLC intergenic region; nudix fold, hydrolase; 1.90A {Escherichia coli} SCOP: d.113.1.1 PDB: 1g9q_A* 1ga7_A 1khz_A* 1viq_A
Probab=99.31 E-value=5.4e-12 Score=107.35 Aligned_cols=86 Identities=15% Similarity=0.103 Sum_probs=58.3
Q ss_pred EEEEEEEe-cCCcEEEEeecccCCCc---ccccCCCCCcccCCCCCHHHHHHHHHHHHhCccccCCceEEeeCCCccccc
Q 048617 136 VVTVRIIG-KDNQILVESHQELSDGS---VRNRCRPLAEKMKSNETPEEAVIRAVKEELGSILNDSITVRIVPGSYSKKL 211 (281)
Q Consensus 136 Vvva~I~~-~~GriLIe~RqefpgG~---vR~RWEfPGGKvepGEt~eeAl~REi~EELGi~v~~~~~V~Vl~gsy~~~~ 211 (281)
.|++++++ ++|++|+-++.+.+.+. -+..|++|||++++|||+++|++||++||+|+.+.. +..+ +
T Consensus 59 av~vl~~~~~~~~vLLvrq~R~~~~~~~~~~~~welPgG~ve~gE~~~~aA~REl~EEtGl~~~~---~~~l-~------ 128 (209)
T 1g0s_A 59 AAVLLPFDPVRDEVVLIEQIRIAAYDTSETPWLLEMVAGMIEEGESVEDVARREAIEEAGLIVKR---TKPV-L------ 128 (209)
T ss_dssp EEEEEEEETTTTEEEEEEEECGGGGGGSSCSEEEECEEEECCTTCCHHHHHHHHHHHHHCCCCCC---EEEE-E------
T ss_pred EEEEEEEECCCCEEEEEEeecccCCCCCCCCeEEEeCcccCCCCcCHHHHHHHHHHHHcCcccCc---EEEe-E------
Confidence 44455566 57899886554333221 146799999999999999999999999999999752 2222 1
Q ss_pred ccccCCCCCCCccEEEEEEEEEEe
Q 048617 212 DERNSLSYPGLPARYVLHSVDAFV 235 (281)
Q Consensus 212 e~r~S~SYPGL~vryvLh~v~a~V 235 (281)
. -+.+||.. ...+|.|.|.+
T Consensus 129 --~-~~~~~g~~-~~~~~~f~a~~ 148 (209)
T 1g0s_A 129 --S-FLASPGGT-SERSSIMVGEV 148 (209)
T ss_dssp --E-EESCTTTB-CCEEEEEEEEC
T ss_pred --E-EecCCCcc-CcEEEEEEEEE
Confidence 1 13466653 24567777765
No 61
>2a6t_A SPAC19A8.12; alpha/beta/alpha, RNA binding protein,hydrolase; 2.50A {Schizosaccharomyces pombe} SCOP: a.242.1.1 d.113.1.7 PDB: 2qkm_B*
Probab=99.29 E-value=2.1e-12 Score=115.49 Aligned_cols=58 Identities=17% Similarity=0.123 Sum_probs=50.0
Q ss_pred EEEEEEEEEEec-CCcEEEEeecccCCCcccccCCCCCcccCCCCCHHHHHHHHHHHHhCcccc
Q 048617 133 TVNVVTVRIIGK-DNQILVESHQELSDGSVRNRCRPLAEKMKSNETPEEAVIRAVKEELGSILN 195 (281)
Q Consensus 133 ~V~Vvva~I~~~-~GriLIe~RqefpgG~vR~RWEfPGGKvepGEt~eeAl~REi~EELGi~v~ 195 (281)
.|.|++|+|.+. +|++|+.+|... .+.|++|||++|+|||+++|++||++||+|+.+.
T Consensus 100 ~v~~v~avv~~~~~~~vLLv~r~~~-----~g~W~lPgG~ve~gEs~~eAA~REl~EEtGl~~~ 158 (271)
T 2a6t_A 100 RIPVRGAIMLDMSMQQCVLVKGWKA-----SSGWGFPKGKIDKDESDVDCAIREVYEETGFDCS 158 (271)
T ss_dssp CCCEEEEEEBCSSSSEEEEEEESST-----TCCCBCSEEECCTTCCHHHHHHHHHHHHHCCCCT
T ss_pred CCCeEEEEEEECCCCEEEEEEEeCC-----CCeEECCcccCCCCcCHHHHHHHHHHHHhCCCce
Confidence 466777888886 489999988532 3679999999999999999999999999999987
No 62
>1u20_A U8 snoRNA-binding protein X29; modified nudix hydrolase fold, hydrolase; 2.10A {Xenopus laevis} SCOP: d.113.1.1 PDB: 2a8t_A* 2a8q_A* 2a8p_A* 2a8r_A* 2a8s_A*
Probab=99.27 E-value=2.4e-12 Score=109.94 Aligned_cols=82 Identities=17% Similarity=0.112 Sum_probs=59.6
Q ss_pred EEEEEEecCCcEEEEeecccCCCcccccCCCCCcccCCCC-CHHHHHHHHHHHHhCccccCCceEEeeCCCccccccccc
Q 048617 137 VTVRIIGKDNQILVESHQELSDGSVRNRCRPLAEKMKSNE-TPEEAVIRAVKEELGSILNDSITVRIVPGSYSKKLDERN 215 (281)
Q Consensus 137 vva~I~~~~GriLIe~RqefpgG~vR~RWEfPGGKvepGE-t~eeAl~REi~EELGi~v~~~~~V~Vl~gsy~~~~e~r~ 215 (281)
+++.|++.++++|+.+|. .+.|+|||||+++|| |+++|+.||++||+|+.+.... +... ......
T Consensus 47 vv~~i~~~~~~vLl~~r~-------~g~w~~PGG~ve~gE~t~~~aa~REl~EEtGl~~~~~~-l~~~------~~~~~~ 112 (212)
T 1u20_A 47 KLFDRVPIRRVLLMMMRF-------DGRLGFPGGFVDTRDISLEEGLKRELEEELGPALATVE-VTED------DYRSSQ 112 (212)
T ss_dssp EETTTEECCEEEEEEEET-------TSCEECSEEEECTTTSCHHHHHHHHHHHHHCGGGGGCC-CCGG------GEEEEE
T ss_pred EEEEEEecCCEEEEEEeC-------CCeEECCCcccCCCCCCHHHHHHHHHHHHHCCCccccc-eeee------eEEEec
Confidence 334466888999998872 568999999999999 9999999999999999987321 0000 001233
Q ss_pred CCCCCCCccEEEEEEEEEEe
Q 048617 216 SLSYPGLPARYVLHSVDAFV 235 (281)
Q Consensus 216 S~SYPGL~vryvLh~v~a~V 235 (281)
.+.|+ ..+.+|.|.|.+
T Consensus 113 ~~~~~---~~~~~~~f~~~~ 129 (212)
T 1u20_A 113 VREHP---QKCVTHFYIKEL 129 (212)
T ss_dssp EECTT---SCEEEEEEEEEC
T ss_pred cccCC---CcEEEEEEEEEe
Confidence 35577 347888888876
No 63
>2fml_A MUTT/nudix family protein; structural genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; 2.26A {Enterococcus faecalis} SCOP: a.4.5.68 d.113.1.6
Probab=99.25 E-value=4e-11 Score=106.56 Aligned_cols=49 Identities=24% Similarity=0.383 Sum_probs=42.1
Q ss_pred CCcEEEEeecccCCCcccccCCCCCcccCCCCCHHHHHHHHHHHHhCccccC
Q 048617 145 DNQILVESHQELSDGSVRNRCRPLAEKMKSNETPEEAVIRAVKEELGSILND 196 (281)
Q Consensus 145 ~GriLIe~RqefpgG~vR~RWEfPGGKvepGEt~eeAl~REi~EELGi~v~~ 196 (281)
+++||+-+|..- ...++|.+|||++++|||+++|+.||++||+|+.+..
T Consensus 55 ~~~VLLv~R~~~---p~~g~W~lPGG~ve~gEs~~~AA~REl~EEtGl~v~~ 103 (273)
T 2fml_A 55 QLKVLLIQRKGH---PFRNSWALPGGFVNRNESTEDSVLRETKEETGVVISQ 103 (273)
T ss_dssp EEEEEEEEECSS---SSTTCEECCEEECCTTSCHHHHHHHHHHHHHCCCCCG
T ss_pred CcEEEEEEccCC---CCCCcEECCccCCCCCcCHHHHHHHHHHHHHCCCCCc
Confidence 459999988632 2457999999999999999999999999999987764
No 64
>2dsc_A ADP-sugar pyrophosphatase; nudix domain, ADPR, ADP-ribose pyrophosphatase, NUDT5, hydrolase; HET: APR; 2.00A {Homo sapiens} PDB: 2dsd_A* 3bm4_A* 2dsb_A 3aca_A* 3ac9_A* 3l85_A*
Probab=99.23 E-value=3.2e-11 Score=102.12 Aligned_cols=48 Identities=25% Similarity=0.235 Sum_probs=39.0
Q ss_pred CcEEEEeecccCCCcccccCCCCCcccCCCCCHHHHHHHHHHHHhCcccc
Q 048617 146 NQILVESHQELSDGSVRNRCRPLAEKMKSNETPEEAVIRAVKEELGSILN 195 (281)
Q Consensus 146 GriLIe~RqefpgG~vR~RWEfPGGKvepGEt~eeAl~REi~EELGi~v~ 195 (281)
+++|+.++.+.+-+ +..|++|||++++|||+++|++||++||+|+.+.
T Consensus 77 ~~vlLv~q~R~~~~--~~~welPgG~ve~gEs~~~aA~REl~EEtGl~~~ 124 (212)
T 2dsc_A 77 ECIVLVKQFRPPMG--GYCIEFPAGLIDDGETPEAAALRELEEETGYKGD 124 (212)
T ss_dssp CEEEEEEEEEGGGT--EEEEECCEEECCTTCCHHHHHHHHHHHHHCCCCE
T ss_pred cEEEEEEeecCCCC--CcEEECCccccCCCCCHHHHHHHHHHHHhCCCcc
Confidence 47877654333322 4579999999999999999999999999999865
No 65
>3gz5_A MUTT/nudix family protein; DNA binding protein, nudix domain, WHTH domain; 2.20A {Shewanella oneidensis} PDB: 3gz6_A* 3gz8_A*
Probab=99.22 E-value=4.1e-11 Score=104.73 Aligned_cols=52 Identities=12% Similarity=0.122 Sum_probs=44.3
Q ss_pred EecCCcEEEEeecccCCCcccccCCCCCcccCC--CCCHHHHHHHHHHHHhCccccC
Q 048617 142 IGKDNQILVESHQELSDGSVRNRCRPLAEKMKS--NETPEEAVIRAVKEELGSILND 196 (281)
Q Consensus 142 ~~~~GriLIe~RqefpgG~vR~RWEfPGGKvep--GEt~eeAl~REi~EELGi~v~~ 196 (281)
.+.+++||+.+|.. ....+.|.+|||++++ |||+++|+.||++||+|+.+..
T Consensus 33 ~~~~~~vLLv~R~~---~~~~g~W~lPGG~ve~~~gEs~~~AA~REl~EEtGl~~~~ 86 (240)
T 3gz5_A 33 HDQQLKVLLVQRSN---HPFLGLWGLPGGFIDETCDESLEQTVLRKLAEKTAVVPPY 86 (240)
T ss_dssp ETTEEEEEEEECCS---SSSTTCEECSEEECCTTTCSBHHHHHHHHHHHHHSSCCSE
T ss_pred eCCCcEEEEEECcC---CCCCCCEECCccccCCCCCcCHHHHHHHHHHHHHCCCCCc
Confidence 35567999998862 2246789999999999 9999999999999999999763
No 66
>3kvh_A Protein syndesmos; NUDT16-like, NUDT16L1, nudix, RNA regulation, RNA structural genomics consortium, SGC, RNA degradation, RNA B protein; 1.70A {Homo sapiens}
Probab=99.17 E-value=3.8e-12 Score=113.84 Aligned_cols=70 Identities=14% Similarity=-0.032 Sum_probs=49.0
Q ss_pred CcccccCCCCCcccCCCC-CHHHHHHHHHHHHhCc-cccCCceEEeeCCCcccccccccCCCCCCCccEEEEEEEEEEe-
Q 048617 159 GSVRNRCRPLAEKMKSNE-TPEEAVIRAVKEELGS-ILNDSITVRIVPGSYSKKLDERNSLSYPGLPARYVLHSVDAFV- 235 (281)
Q Consensus 159 G~vR~RWEfPGGKvepGE-t~eeAl~REi~EELGi-~v~~~~~V~Vl~gsy~~~~e~r~S~SYPGL~vryvLh~v~a~V- 235 (281)
++..++|+|||||||+|| |+++||.|||+||||+ .|...+- .....++|| . +++||.|.|++
T Consensus 50 ~R~~G~weFPGGkVe~gE~t~e~aL~REl~EElg~~~V~~~~y------------~~s~~~~yp-~--~V~LHfY~crl~ 114 (214)
T 3kvh_A 50 MRFDGLLGFPGGFVDRRFWSLEDGLNRVLGLGLGCLRLTEADY------------LSSHLTEGP-H--RVVAHLYARQLT 114 (214)
T ss_dssp EETTSCEECSEEEECTTTCCHHHHHHHSCCSCC---CCCGGGE------------EEEEEC-------CEEEEEEEEECC
T ss_pred eeeCCEEeCCCccCCCCCCCHHHHHHHHHHHhhCCeeeeeeee------------EEEEeccCC-C--EEEEEEEEEEee
Confidence 345689999999999999 9999999999999997 4542221 124456788 3 59999999997
Q ss_pred cCCCCCCC
Q 048617 236 DGLPEEGE 243 (281)
Q Consensus 236 ~GlPe~~e 243 (281)
.|+|+.-|
T Consensus 115 ~Ge~~~lE 122 (214)
T 3kvh_A 115 LEQLHAVE 122 (214)
T ss_dssp HHHHHHHH
T ss_pred CCccchhh
Confidence 77665333
No 67
>3q91_A Uridine diphosphate glucose pyrophosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 2.70A {Homo sapiens}
Probab=99.12 E-value=1.2e-10 Score=101.61 Aligned_cols=63 Identities=22% Similarity=0.056 Sum_probs=43.4
Q ss_pred cccCCCCCcccCC-CCCHHHHHHHHHHHHhCccccCCceEEeeCCCcccccccccCCCCCCCccEEEEEEEEEEec
Q 048617 162 RNRCRPLAEKMKS-NETPEEAVIRAVKEELGSILNDSITVRIVPGSYSKKLDERNSLSYPGLPARYVLHSVDAFVD 236 (281)
Q Consensus 162 R~RWEfPGGKvep-GEt~eeAl~REi~EELGi~v~~~~~V~Vl~gsy~~~~e~r~S~SYPGL~vryvLh~v~a~V~ 236 (281)
+..|++|||++++ |||+++|++||++||+|+.+.... +..+ ++ ....||.. ...+|.|.|++.
T Consensus 94 ~~~welPgG~ve~~gEs~~eaA~REl~EEtGl~~~~~~-l~~l-~~---------~~~~~g~~-~~~~~~f~a~~~ 157 (218)
T 3q91_A 94 GVTVELCAGLVDQPGLSLEEVACKEAWEECGYHLAPSD-LRRV-AT---------YWSGVGLT-GSRQTMFYTEVT 157 (218)
T ss_dssp CEEEECEEEECCSSSCCHHHHHHHHHHHHHCBCCCGGG-CEEE-EE---------EEEC---C-CEEEEEEEEEEC
T ss_pred CeEEECCcceeCCCCCCHHHHHHHHHHHHhCCccccCc-eEEE-EE---------EecCCCcc-ceEEEEEEEEEC
Confidence 6789999999999 999999999999999999984221 2222 11 11234443 356778888764
No 68
>3o6z_A GDP-mannose pyrophosphatase NUDK; nudix, hydrolase, biofilm; 2.05A {Escherichia coli} SCOP: d.113.1.1 PDB: 3o52_A* 1viu_A 3o69_A 3o61_A
Probab=99.12 E-value=1e-10 Score=97.74 Aligned_cols=58 Identities=17% Similarity=0.295 Sum_probs=44.1
Q ss_pred EEEEEEe-cCCcEEEEeecccC---CCc-ccccCCCCCcccCCCCCHHHHHHHHHHHHhCcccc
Q 048617 137 VTVRIIG-KDNQILVESHQELS---DGS-VRNRCRPLAEKMKSNETPEEAVIRAVKEELGSILN 195 (281)
Q Consensus 137 vva~I~~-~~GriLIe~Rqefp---gG~-vR~RWEfPGGKvepGEt~eeAl~REi~EELGi~v~ 195 (281)
|++++++ ++|++|+-++.+.+ .|. -++.|++|||+++ |||+++|+.||++||+|+.+.
T Consensus 48 v~v~~~~~~~~~vlLv~~~r~~~~~~~~~~~~~w~lPgG~ve-gE~~~~aa~REl~EEtG~~~~ 110 (191)
T 3o6z_A 48 ATILLYNTKKKTVVLIRQFRVATWVNGNESGQLIESCAGLLD-NDEPEVCIRKEAIEETGYEVG 110 (191)
T ss_dssp EEEEEEETTTTEEEEEEEECHHHHTTTCTTCEEEECEEEECC-SSCHHHHHHHHHHHHC-CCCS
T ss_pred EEEEEEECCCCEEEEEEcCCccccccCCCCCeEEEecceEeC-CCCHHHHHHHHHHHHhCCccC
Confidence 4444556 46899987665433 222 3567999999999 999999999999999999975
No 69
>2dho_A Isopentenyl-diphosphate delta-isomerase 1; alpha/beta protein; 1.60A {Homo sapiens} PDB: 2i6k_A* 2icj_A 2ick_A*
Probab=99.02 E-value=7.2e-10 Score=97.30 Aligned_cols=58 Identities=21% Similarity=0.285 Sum_probs=46.7
Q ss_pred EEEEEEecCCcEEEEeecccCCCcccccCCCC-CcccCCC------CCH---HHHHHHHHHHHhCcccc
Q 048617 137 VTVRIIGKDNQILVESHQELSDGSVRNRCRPL-AEKMKSN------ETP---EEAVIRAVKEELGSILN 195 (281)
Q Consensus 137 vva~I~~~~GriLIe~RqefpgG~vR~RWEfP-GGKvepG------Et~---eeAl~REi~EELGi~v~ 195 (281)
+.+.|++.+|++|+.+|.. .+....+.|.+| ||++++| ||+ ++|+.||++||||+.+.
T Consensus 62 v~v~v~~~~g~lLLq~R~~-~k~~~pg~W~~p~gG~v~~Ge~E~~~E~~~~~~~Aa~REl~EElGi~~~ 129 (235)
T 2dho_A 62 FSVFLFNTENKLLLQQRSD-AKITFPGCFTNTCCSHPLSNPAELEESDALGVRRAAQRRLKAELGIPLE 129 (235)
T ss_dssp EEEEEECTTCCEEEEEECT-TCSSSTTCEESSEEECCBSSHHHHCCGGGHHHHHHHHHHHHHHHCCCGG
T ss_pred EEEEEEcCCCEEEEEEecC-cCCCCCCcEEeccCceecCCCcccccccchhHHHHHHHHHHHHHCCCcc
Confidence 3445678899999998862 223356789998 6999999 884 99999999999999865
No 70
>3fjy_A Probable MUTT1 protein; dimer, protein structure initiative II), NYSGXRC, 11181H, structural genomics; 2.15A {Bifidobacterium adolescentis atcc 1570ORGANISM_TAXID}
Probab=99.02 E-value=3.2e-10 Score=103.31 Aligned_cols=48 Identities=21% Similarity=0.239 Sum_probs=41.6
Q ss_pred cCCcEEEEeecccCCCcccccCCCCCcccCCCCCHHHHHHHHHHHHhCccccCC
Q 048617 144 KDNQILVESHQELSDGSVRNRCRPLAEKMKSNETPEEAVIRAVKEELGSILNDS 197 (281)
Q Consensus 144 ~~GriLIe~RqefpgG~vR~RWEfPGGKvepGEt~eeAl~REi~EELGi~v~~~ 197 (281)
.+++||+-+|. . .+.|.|||||+|+|||+++|+.||++||+|+.+...
T Consensus 36 ~~~~vLLv~r~---~---~g~W~lPgG~ve~gEs~~~AA~REl~EEtGl~~~~~ 83 (364)
T 3fjy_A 36 DSIEVCIVHRP---K---YDDWSWPKGKLEQNETHRHAAVREIGEETGSPVKLG 83 (364)
T ss_dssp TTEEEEEEEET---T---TTEEECCEEECCTTCCHHHHHHHHHHHHHSCCEEEE
T ss_pred CceEEEEEEcC---C---CCCEECCcCCCCCCCCHHHHHHHHHHHHhCCeeeec
Confidence 34589999885 2 278999999999999999999999999999998743
No 71
>3bho_A Cleavage and polyadenylation specificity factor subunit 5; CPSF5, RNA processing, cleavage factor, diadenosine tetraphosphate, mRNA processing; HET: B4P; 1.80A {Homo sapiens} PDB: 3bap_A 3mdg_A 3mdi_A 2cl3_A 3n9u_A 3q2s_A 3q2t_A 2j8q_A 3p5t_A 3p6y_A
Probab=99.01 E-value=3.3e-10 Score=101.01 Aligned_cols=52 Identities=19% Similarity=0.227 Sum_probs=44.9
Q ss_pred EEEEEEEEEecCC--cEEEEeecccCCCcccccCCCCCcccCCCCCHHHHHHHHHHHHhCc
Q 048617 134 VNVVTVRIIGKDN--QILVESHQELSDGSVRNRCRPLAEKMKSNETPEEAVIRAVKEELGS 192 (281)
Q Consensus 134 V~Vvva~I~~~~G--riLIe~RqefpgG~vR~RWEfPGGKvepGEt~eeAl~REi~EELGi 192 (281)
+.|++++|+++++ +||+.|+. . +.|++||||+|+||++++||+|||.||||+
T Consensus 59 ~sV~avil~~~~~~phVLLlq~~--~-----~~f~LPGGkle~gE~~~eaL~REL~EELg~ 112 (208)
T 3bho_A 59 RTVEGVLIVHEHRLPHVLLLQLG--T-----TFFKLPGGELNPGEDEVEGLKRLMTEILGR 112 (208)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEE--T-----TEEECSEEECCTTCCHHHHHHHHHHHHHCC
T ss_pred eEEEEEEEEcCCCCcEEEEEEcC--C-----CcEECCCcccCCCCCHHHHHHHHHHHHhCC
Confidence 5677788887776 79998773 2 389999999999999999999999999995
No 72
>2xsq_A U8 snoRNA-decapping enzyme; hydrolase, mRNA decapping, mRNA turnover, structural genomic consortium, SGC; HET: IMP; 1.72A {Homo sapiens} PDB: 3cou_A 3mgm_A
Probab=98.98 E-value=2.9e-10 Score=98.75 Aligned_cols=43 Identities=21% Similarity=0.288 Sum_probs=37.8
Q ss_pred cEEEEeecccCCCcccccCCCCCcccCCCC-CHHHHHHHHHHHHhCccccC
Q 048617 147 QILVESHQELSDGSVRNRCRPLAEKMKSNE-TPEEAVIRAVKEELGSILND 196 (281)
Q Consensus 147 riLIe~RqefpgG~vR~RWEfPGGKvepGE-t~eeAl~REi~EELGi~v~~ 196 (281)
++|+-.|+ ++.|++||||+|+|| |+++|+.||++||+|+.+..
T Consensus 66 ~~ll~~r~-------~g~w~lPGG~ve~gE~t~~eaa~REl~EEtGl~~~~ 109 (217)
T 2xsq_A 66 AILMQMRF-------DGRLGFPGGFVDTQDRSLEDGLNRELREELGEAAAA 109 (217)
T ss_dssp EEEEEEET-------TSCEECSEEECCTTCSSHHHHHHHHHHHHHCGGGGG
T ss_pred cEEEEEcc-------CCeEECCceecCCCCCCHHHHHHHHHHHHHCCCCcc
Confidence 57776665 467999999999999 99999999999999999873
No 73
>2pny_A Isopentenyl-diphosphate delta-isomerase 2; carotenoid biosynthesis, cholesterol biosynthesis, isomerase isoprene biosynthesis, lipid synthesis; HET: GOL; 1.81A {Homo sapiens}
Probab=98.92 E-value=5e-09 Score=92.80 Aligned_cols=58 Identities=17% Similarity=0.230 Sum_probs=46.8
Q ss_pred EEEEEEecCCcEEEEeecccCCCcccccCCCC-CcccCCC------CCH---HHHHHHHHHHHhCcccc
Q 048617 137 VTVRIIGKDNQILVESHQELSDGSVRNRCRPL-AEKMKSN------ETP---EEAVIRAVKEELGSILN 195 (281)
Q Consensus 137 vva~I~~~~GriLIe~RqefpgG~vR~RWEfP-GGKvepG------Et~---eeAl~REi~EELGi~v~ 195 (281)
+.+.|+|.+|++|+.+|.. .+....+.|.+| ||++++| ||+ ++|+.||++||||+.+.
T Consensus 73 v~v~v~~~~g~lLLqrRs~-~K~~~pG~W~~p~gG~v~~G~~E~~~Et~~~~~eAA~REl~EElGi~~~ 140 (246)
T 2pny_A 73 FSVVLFNTKNRILIQQRSD-TKVTFPGYFTDSCSSHPLYNPAELEEKDAIGVRRAAQRRLQAELGIPGE 140 (246)
T ss_dssp EEEEEECTTCCEEEEEECT-TCSSSTTCBCCSEEECCBSSHHHHCCGGGHHHHHHHHHHHHHHHCCCTT
T ss_pred EEEEEEeCCCEEEEEEecC-CCCCCCCceEeccCceeccCCcccccccchhHHHHHHHHHHHHHCCCcc
Confidence 3445678899999998862 222356789988 4999999 998 99999999999999865
No 74
>1q33_A Pyrophosphatase, ADP-ribose pyrophosphatase; nudix fold, hydrolase; HET: BGC; 1.81A {Homo sapiens} SCOP: d.113.1.1 PDB: 1qvj_A*
Probab=98.74 E-value=1.2e-08 Score=92.16 Aligned_cols=42 Identities=14% Similarity=0.090 Sum_probs=37.6
Q ss_pred cEEEEeecccCCCcccccCCCCCcccCCCCCHHHHHHHHHHHHhCccc
Q 048617 147 QILVESHQELSDGSVRNRCRPLAEKMKSNETPEEAVIRAVKEELGSIL 194 (281)
Q Consensus 147 riLIe~RqefpgG~vR~RWEfPGGKvepGEt~eeAl~REi~EELGi~v 194 (281)
++|+.+|.. .+.|.+|||+|++|||+++|++||++||+|+.+
T Consensus 140 ~vLl~~r~~------~g~W~lPGG~Ve~GEs~~eAA~REl~EETGl~~ 181 (292)
T 1q33_A 140 QFVAIKRKD------CGEWAIPGGMVDPGEKISATLKREFGEEALNSL 181 (292)
T ss_dssp EEEEEECTT------TCSEECCCEECCTTCCHHHHHHHHHHHHHSCGG
T ss_pred EEEEEEecC------CCcEeCCCcccCCCCCHHHHHHHHHHHHhCCcc
Confidence 588888862 268999999999999999999999999999985
No 75
>3qsj_A Nudix hydrolase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.70A {Alicyclobacillus acidocaldarius subsp}
Probab=98.68 E-value=1.2e-08 Score=90.39 Aligned_cols=47 Identities=15% Similarity=0.164 Sum_probs=41.3
Q ss_pred cEEEEeecccCCC-cccccCCCCCcccCCCCC--------------------HHHHHHHHHHHHhCcccc
Q 048617 147 QILVESHQELSDG-SVRNRCRPLAEKMKSNET--------------------PEEAVIRAVKEELGSILN 195 (281)
Q Consensus 147 riLIe~RqefpgG-~vR~RWEfPGGKvepGEt--------------------~eeAl~REi~EELGi~v~ 195 (281)
+||+.+|. ... .+.+.|.|||||+++||+ ..+|++||++||+|+.+.
T Consensus 25 ~vLl~~R~--~~~~~~~g~~~fPGG~vd~~d~~~~~~~~g~~~~~~~~~~~a~~~aAiRE~~EE~Gl~l~ 92 (232)
T 3qsj_A 25 EVLVVRRA--KTMRFLPGFVAFPGGAADPSDAEMAKRAFGRPVCAEDDDDPALAVTALRETAEEIGWLLA 92 (232)
T ss_dssp EEEEEEEC--TTCSSSTTCEECSEEECCHHHHHHHHTCBSCCBTCCSTTHHHHHHHHHHHHHHHHSCCCS
T ss_pred EEEEEEcc--CCCCCCCCcEECCceeEecCCCCchhhhcccccccccchhhHHHHHHHHHHHHHhCceec
Confidence 89999997 332 367899999999999998 489999999999999986
No 76
>3dup_A MUTT/nudix family protein; nudix superfamily hydrolase, hydrolase 3 family, structural protein structure initiative, PSI; HET: MSE; 1.80A {Rhodospirillum rubrum atcc 11170}
Probab=98.33 E-value=5.4e-07 Score=83.01 Aligned_cols=61 Identities=8% Similarity=0.040 Sum_probs=48.9
Q ss_pred eeEEEEEEEEEEecCC---cEEEEeecccCCCcccccC-CCCCcccCCCCCHHHHHHHHHHHHhCcccc
Q 048617 131 VRTVNVVTVRIIGKDN---QILVESHQELSDGSVRNRC-RPLAEKMKSNETPEEAVIRAVKEELGSILN 195 (281)
Q Consensus 131 ~R~V~Vvva~I~~~~G---riLIe~RqefpgG~vR~RW-EfPGGKvepGEt~eeAl~REi~EELGi~v~ 195 (281)
-+.|||.+ .+.+| ++||.+|. ..+-.-.+.| ..+||.+++|||+++|+.||++||+|+.+.
T Consensus 118 ~~~vh~~~---~~~~~~~~~lll~rRs-~~K~~~PG~wd~svaG~i~~GEs~~eaA~REl~EElGI~~~ 182 (300)
T 3dup_A 118 AYGVHLNG---YVGAGADLHLWIGRRS-PDKSVAPGKLDNMVAGGQPADLSLRQNLIKECAEEADLPEA 182 (300)
T ss_dssp EEEEEEEE---EESCGGGCEEEEEEEC-TTCSSSTTCEEESEEEECCTTSCHHHHHHHHHHHHHCCCHH
T ss_pred EEEEEEEE---EEecCCeeEEEEEeCC-CcccCCCCccccccccCCCCCCCHHHHHHHHHHHHhCCChh
Confidence 45556553 44555 99999997 2344567889 799999999999999999999999999865
No 77
>3rh7_A Hypothetical oxidoreductase; FMN-binding split barrel, nudix, structural genomics, joint for structural genomics, JCSG; HET: FMN; 3.00A {Sinorhizobium meliloti}
Probab=98.13 E-value=2.8e-06 Score=78.55 Aligned_cols=86 Identities=12% Similarity=0.178 Sum_probs=55.8
Q ss_pred EEEEEEEecCCcEEEEeecccCCCcccccCCCCCcccCCCCCHHHHHHHHHHHHh-CccccCCceEEeeCCCcccccccc
Q 048617 136 VVTVRIIGKDNQILVESHQELSDGSVRNRCRPLAEKMKSNETPEEAVIRAVKEEL-GSILNDSITVRIVPGSYSKKLDER 214 (281)
Q Consensus 136 Vvva~I~~~~GriLIe~RqefpgG~vR~RWEfPGGKvepGEt~eeAl~REi~EEL-Gi~v~~~~~V~Vl~gsy~~~~e~r 214 (281)
+++++|++.+||||+. ++ .+ |.+|||+++.+++ +|+.||++||+ |+.|+...-+.+- +
T Consensus 184 ~~vgaii~~~g~vLL~-----~~---~G-W~LPG~~~~~~~~--~~a~RE~~EEttGl~v~~~~L~~v~----~------ 242 (321)
T 3rh7_A 184 IRLGAVLEQQGAVFLA-----GN---ET-LSLPNCTVEGGDP--ARTLAAYLEQLTGLNVTIGFLYSVY----E------ 242 (321)
T ss_dssp EEEEEEEESSSCEEEB-----CS---SE-EBCCEEEESSSCH--HHHHHHHHHHHHSSCEEEEEEEEEE----E------
T ss_pred ceEEEEEEECCEEEEe-----eC---CC-ccCCcccCCCChh--HHHHHHHHHHhcCCEEeeceEEEEE----E------
Confidence 5567777888999997 22 35 9999997765555 58889999998 9999855333222 1
Q ss_pred cCCCCCCCccEEEEEEEEEEe-cCCCCCCCccccc
Q 048617 215 NSLSYPGLPARYVLHSVDAFV-DGLPEEGEFCTEE 248 (281)
Q Consensus 215 ~S~SYPGL~vryvLh~v~a~V-~GlPe~~eF~TeE 248 (281)
.+.....+ ..|.|++ .|.|.+-.|...+
T Consensus 243 ----~~~~~~~~--i~f~~~~~~g~~~e~~~f~~~ 271 (321)
T 3rh7_A 243 ----DKSDGRQN--IVYHALASDGAPRQGRFLRPA 271 (321)
T ss_dssp ----CTTTCCEE--EEEEEEECSSCCSSSEEECHH
T ss_pred ----cCCCceEE--EEEEEEeCCCCeeeeEEECHH
Confidence 11111112 3667775 7776655565544
No 78
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=24.25 E-value=1.1e+02 Score=24.04 Aligned_cols=65 Identities=9% Similarity=0.301 Sum_probs=34.2
Q ss_pred CChhhHHHhhcCCCCCCCccccCC--CCCcccHhHHHHHhhcCceeeecCCCCeeEEEEEEEEEEecCCcEE
Q 048617 80 ATPQSLSDWLKPRLPSDSFASWGV--KPGTKNVHNLWLELSDGETCLADAIPPVRTVNVVTVRIIGKDNQIL 149 (281)
Q Consensus 80 ~~~~sL~~wLk~rl~~~~~~~wG~--~pgtK~v~~L~~El~~get~L~ds~~p~R~V~Vvva~I~~~~GriL 149 (281)
-|++.|.+|++.. +.++..|-. .+..+.+..++.. +.-...+....-...|..+..|+|++|+|.
T Consensus 81 Dtp~~l~~y~~~~--~~~~~~~~~ltg~~~~~~~~~~~~---~~~~~~~~~~~~~~~H~~~~~liD~~G~i~ 147 (170)
T 4hde_A 81 DKPENLKAFIQKF--TEDTSNWNLLTGYSLEDITKFSKD---NFQSLVDKPENGQVIHGTSFYLIDQNGKVM 147 (170)
T ss_dssp CCHHHHHHHHTTT--CSCCTTEEEEBCSCHHHHHHHHHH---HHCCCCBCCTTSCCBCCCEEEEECTTSCEE
T ss_pred ccHHHHHHHHHHc--CCCCCCceecCcccHHHHHHHHHh---cccccccCCCCceEEeeeEEEEEcCCCeEE
Confidence 4689999999987 444444421 1222333333332 222222221222345556667889999875
No 79
>1rij_A E6APN1 peptide; Trp-CAGE, E6-binding domain, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.32.1.1
Probab=20.07 E-value=32 Score=21.38 Aligned_cols=13 Identities=46% Similarity=0.739 Sum_probs=10.0
Q ss_pred hHHHhhcCCCCCC
Q 048617 84 SLSDWLKPRLPSD 96 (281)
Q Consensus 84 sL~~wLk~rl~~~ 96 (281)
-|.+|||...|+.
T Consensus 5 llgqwlkdggpss 17 (26)
T 1rij_A 5 LLGQWLKDGGPSS 17 (26)
T ss_dssp HHHHHHHTTGGGS
T ss_pred HHHHHHHcCCCCC
Confidence 3789999996654
Done!