Query 048624
Match_columns 673
No_of_seqs 356 out of 2303
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 19:43:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048624.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/048624hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ddh_A Acyl-COA oxidase; beta 100.0 1.2E-98 4E-103 862.0 58.5 607 41-671 15-636 (661)
2 1w07_A Acyl-COA oxidase; oxido 100.0 2.1E-98 7E-103 861.4 50.4 607 35-671 10-633 (659)
3 2z1q_A Acyl-COA dehydrogenase; 100.0 1E-60 3.6E-65 542.1 42.2 490 49-612 28-534 (577)
4 3owa_A Acyl-COA dehydrogenase; 100.0 1.6E-58 5.4E-63 523.9 47.2 492 47-606 31-546 (597)
5 1ukw_A Acyl-COA dehydrogenase; 100.0 4.5E-59 1.5E-63 504.4 32.9 371 45-472 1-378 (379)
6 2d29_A Acyl-COA dehydrogenase; 100.0 5.8E-59 2E-63 504.9 33.8 376 45-472 3-385 (387)
7 2jif_A Short/branched chain sp 100.0 4.4E-59 1.5E-63 508.0 32.8 373 44-473 24-403 (404)
8 2vig_A Short-chain specific ac 100.0 9.7E-59 3.3E-63 503.7 34.5 377 44-476 1-384 (391)
9 3pfd_A Acyl-COA dehydrogenase; 100.0 2.7E-59 9.3E-64 508.4 29.9 376 41-472 11-393 (393)
10 3p4t_A Putative acyl-COA dehyd 100.0 8.6E-59 2.9E-63 506.0 31.9 384 31-470 8-399 (403)
11 1egd_A Medium chain acyl-COA d 100.0 1E-58 3.4E-63 504.5 31.5 377 44-474 11-394 (396)
12 1buc_A Butyryl-COA dehydrogena 100.0 2.2E-58 7.5E-63 499.7 32.7 372 45-471 1-382 (383)
13 1ivh_A Isovaleryl-COA dehydrog 100.0 3E-58 1E-62 500.4 30.9 374 47-474 11-393 (394)
14 3r7k_A Probable acyl COA dehyd 100.0 4.9E-58 1.7E-62 500.0 32.0 372 42-470 22-401 (403)
15 3nf4_A Acyl-COA dehydrogenase; 100.0 4.4E-58 1.5E-62 498.1 30.2 369 45-472 12-387 (387)
16 3ii9_A Glutaryl-COA dehydrogen 100.0 1.3E-58 4.3E-63 503.7 25.3 373 42-472 12-391 (396)
17 2pg0_A Acyl-COA dehydrogenase; 100.0 1.3E-57 4.6E-62 493.9 33.2 371 44-470 4-383 (385)
18 2dvl_A Acyl-COA dehydrogenase; 100.0 8.3E-58 2.8E-62 493.2 31.1 365 47-472 1-372 (372)
19 1rx0_A Acyl-COA dehydrogenase 100.0 2.2E-57 7.5E-62 493.3 33.8 372 44-472 14-392 (393)
20 3sf6_A Glutaryl-COA dehydrogen 100.0 1.7E-57 5.8E-62 495.8 32.7 368 42-472 23-398 (403)
21 4hr3_A Putative acyl-COA dehyd 100.0 1.3E-57 4.4E-62 498.8 30.4 382 42-475 2-413 (415)
22 2ix5_A Acyl-coenzyme A oxidase 100.0 1.8E-57 6.2E-62 499.2 30.7 369 44-472 50-424 (436)
23 2eba_A Putative glutaryl-COA d 100.0 3.5E-57 1.2E-61 490.5 30.5 368 44-472 6-381 (385)
24 3swo_A Glutaryl-COA dehydrogen 100.0 2.6E-57 8.9E-62 493.8 29.3 369 41-472 18-393 (399)
25 2uxw_A VERY-long-chain specifi 100.0 6.1E-55 2.1E-59 495.9 45.5 368 56-473 57-431 (607)
26 2wbi_A Acyl-COA dehydrogenase 100.0 2E-56 6.9E-61 490.9 31.8 385 41-477 15-423 (428)
27 1siq_A GCD, glutaryl-COA dehyd 100.0 4.6E-56 1.6E-60 482.9 30.4 370 43-472 8-384 (392)
28 3mpi_A Glutaryl-COA dehydrogen 100.0 1.6E-56 5.6E-61 487.4 26.9 369 45-470 1-382 (397)
29 3mkh_A Nitroalkane oxidase; ox 100.0 1E-54 3.4E-59 479.3 33.1 390 45-473 3-417 (438)
30 1r2j_A Protein FKBI; polyketid 100.0 3.3E-55 1.1E-59 471.7 26.7 332 84-472 25-363 (366)
31 2c12_A Nitroalkane oxidase; ox 100.0 6.2E-53 2.1E-57 465.0 35.3 388 45-471 2-418 (439)
32 3m9v_A FAD-dependent oxidoredu 100.0 4.1E-50 1.4E-54 442.6 24.9 386 32-473 3-405 (439)
33 3mxl_A Nitrososynthase; flavin 100.0 2.7E-50 9.3E-55 438.1 22.5 373 44-472 4-393 (395)
34 2or0_A Hydroxylase; APC7385, r 100.0 1.5E-48 5E-53 427.0 25.4 380 43-472 12-401 (414)
35 2rfq_A 3-HSA hydroxylase, oxyg 100.0 2.4E-47 8.2E-52 414.8 27.6 365 55-472 11-386 (394)
36 2jbr_A P-hydroxyphenylacetate 100.0 2.8E-47 9.6E-52 417.7 25.6 337 84-472 64-414 (422)
37 3djl_A Protein AIDB; alpha hel 100.0 3.1E-46 1.1E-50 418.1 33.1 336 85-472 88-441 (541)
38 2yyk_A 4-hydroxyphenylacetate- 100.0 3.5E-33 1.2E-37 308.4 29.2 273 144-470 122-422 (481)
39 1u8v_A Gamma-aminobutyrate met 100.0 1.9E-33 6.6E-38 311.0 25.5 275 138-464 119-420 (490)
40 3hwc_A Chlorophenol-4-monooxyg 100.0 1.1E-28 3.9E-33 272.0 24.2 244 142-439 127-392 (515)
41 4g5e_A 2,4,6-trichlorophenol 4 99.9 9.2E-22 3.1E-26 217.3 27.1 241 147-438 135-392 (517)
42 3owa_A Acyl-COA dehydrogenase; 82.1 10 0.00035 42.3 12.9 124 331-471 466-590 (597)
43 2uxw_A VERY-long-chain specifi 51.7 97 0.0033 34.3 12.3 67 359-433 510-576 (607)
44 2caz_B Vacuolar protein sortin 20.7 1.6E+02 0.0056 26.1 5.7 56 577-635 28-86 (155)
No 1
>2ddh_A Acyl-COA oxidase; beta barrel, alpha UP-DOWN bundle, oxidoreductase; HET: FAD HXD; 2.07A {Rattus norvegicus} SCOP: a.29.3.2 a.29.3.2 e.6.1.2 PDB: 1is2_A*
Probab=100.00 E-value=1.2e-98 Score=862.02 Aligned_cols=607 Identities=30% Similarity=0.470 Sum_probs=511.9
Q ss_pred chHhhhhhcCC--CHHHHHH-HHHHHhcCCCCCCC--ccCCHHHHHHHHHHHHHHH---HHHcCCCCccccCCCHHHHHH
Q 048624 41 LCAVIWLYERK--AQGDTRE-SVEYFNSRPDLQTP--VEILKDDHRELCWRQLLGL---VREAGIKPFKYVAEDPAQYFA 112 (673)
Q Consensus 41 ~~~~m~~~l~~--e~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~---l~e~Gl~~~~~p~~~~~~~~~ 112 (673)
++.+|+..|.+ +...+|+ +++++.++|.|..+ ..+++++.++...+.+.+. +.+.|.. +..+...
T Consensus 15 ~~~~l~~~l~g~~~~~~~r~~~~~~l~~~p~~~~~~~~~~~~~e~~~~~~~~~~~l~~~~~~~~~~-------~~~~~~~ 87 (661)
T 2ddh_A 15 NPELITHILDGSPENTRRRREIENLILNDPDFQHEDYNFLTRSQRYEVAVKKSATMVKKMREYGIS-------DPEEIMW 87 (661)
T ss_dssp CHHHHHHHHHTSHHHHHHHHHHHHHHHTCGGGCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHTTCC-------CHHHHHH
T ss_pred CHHHHHHHHCCChhHHHHHHHHHHHHhcCcccccCCcCCCCHHHHHHHHHHHHHHHHHHHHHcCCC-------CchHHHH
Confidence 88899988876 3455565 99999999987642 2467777666554443332 2344432 2333323
Q ss_pred HHHHHhccchhhHHHHHHhHhhHHHHHhccCChhhHHhHHhhhhcCCcceeeeccCCCCCCCcCCceeEEEEcCCCCEEE
Q 048624 113 IAEAVGSVDMSLGIKMGVQYSLWGGSVINLGTKKHRDKYYDGIDNLDYPGCFAMTELHHGSNVQGLQTVATFDPIKDEFI 192 (673)
Q Consensus 113 ~~e~la~~~~s~~~~~~~h~~l~~~~i~~~gt~eq~~~~l~~i~~g~~~g~~a~TE~~~Gsd~~~~~TtA~~d~~~~~~v 192 (673)
.+++... +.+.++.+|.++++.+|..+||++|+++|||++.+|++++|+|+|||+||||+.+++|+|++|+++|+|+
T Consensus 88 -~~~~~~~--~~~~~~~~h~~l~~~~i~~~Gt~eq~~~~L~~i~~Ge~~g~~a~TE~g~GSd~~~l~TtA~~d~~~~~~v 164 (661)
T 2ddh_A 88 -FKNSVHR--GHPEPLDLHLGMFLPTLLHQATAEQQERFFMPAWNLEITGTYAQTEMGHGTHLRGLETTATYDPKTQEFI 164 (661)
T ss_dssp -HHHHHHT--TCCCTTHHHHHTHHHHHC-CCCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEETTTTEEE
T ss_pred -HHHHhcc--chhhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCCeeEEEeeccCCcCcCcccceeEEEEcCCCCeEE
Confidence 5555432 2345567888889999999999999999999999999999999999999999999999999998889999
Q ss_pred EecCCCCceeeeccC-ccccCcEEEEEEEEecCCCCCCCCCCCceEEEEEeecCCCCCCCCCCeEEecCCCCccCCCCCc
Q 048624 193 INTPNDGAIKWWIGN-AAVHGKFATVFAKLMLPTHDSKGYSDMGVHAFIVPIRDMKTHQTLPGIEIHDCGHKVGLNGVDN 271 (673)
Q Consensus 193 LntP~~~G~K~~i~~-~~~~A~~~vV~Ar~~~~g~~~~~~~~~g~~~FlV~~rd~~~~~~~pGv~v~~~~~~~G~~~~~~ 271 (673)
||||+++|+|+|||| +. .|||++|+||+..+++.. |+++|+||++|+++|++.|||+|+++|+++|++++++
T Consensus 165 LntP~~~G~K~wis~~a~-~Ad~~vV~Ar~~~~~~~~------G~~~FlVp~rd~~~~~~~pGV~v~~~~~k~Gl~g~~~ 237 (661)
T 2ddh_A 165 LNSPTVTSIKWWPGGLGK-TSNHAIVLAQLITQGECY------GLHAFVVPIREIGTHKPLPGITVGDIGPKFGYEEMDN 237 (661)
T ss_dssp EECCSSTTSEECCTTTTT-TCSEEEEEEEEEETTEEE------EEEEEEEECBCTTTCCBCTTEEEEECCCCSSCTTCCC
T ss_pred EcCCCCCeEEEecCCCcc-cCCEEEEEEEEccCCCCC------ceEEEEEecccccCCCCCCCeEEecCcccccCCCCcc
Confidence 999999999999999 66 999999999997654443 8999999999889999999999999999999999999
Q ss_pred eeEEecceecCcccccccCCcccCCCccccCCcccchHHHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCC
Q 048624 272 GALRFCSVRIPRDNLLNRFGDVSRDGKYTSSLPTINKRFAATLGELVGGRVGLAYSSVGVLKIAATIAIRYSLLRQQFGP 351 (673)
Q Consensus 272 ~~l~fd~v~VP~~~lL~~~~~v~~~G~~~~~~~~~~~g~~~~~~~l~~~rl~~aa~~~G~a~~al~~a~~ya~~R~qfg~ 351 (673)
+.|.||||+||++++||++++|.++|.|.+++ . +...+..|..+|+.+++.++|++++|++++++|++.|+|||+
T Consensus 238 ~~v~Fd~VrVP~~~lLg~~~~v~~~G~~~~~~---~--~~~~~~~l~~~R~~iaa~~~G~a~~al~~a~~ya~~R~qfg~ 312 (661)
T 2ddh_A 238 GYLKMDNYRIPRENMLMKYAQVKPDGTYVKPL---S--NKLTYGTMVFVRSFLVGNAAQSLSKACTIAIRYSAVRRQSEI 312 (661)
T ss_dssp EEEEESSEEEEGGGBCCSSCEECTTCCEECCC-------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCBCSCS
T ss_pred eEEEeccEEECHHHhcCcccccCCCCceeccc---h--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcccCC
Confidence 99999999999999999988888889888764 1 346677889999999999999999999999999999999997
Q ss_pred -CCCCcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hccCCcchhhhHHHHHHhHHHHHHHHHHHHHHHH
Q 048624 352 -PRKPEVSILDYQSQQHKLMPMLASTYAFHFATANLVEKYSEM---KKTHDEQLVGDVHALSAGLKSYVTSYTAKSLSVC 427 (673)
Q Consensus 352 -~~~~e~~i~~~q~vq~~La~~~a~~~a~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~K~~at~~a~~~~~~~ 427 (673)
++++|.||++||.+|++|+++.+.+++++++...+...+... .+.++.....+.+..++++|+++++.+.++++.|
T Consensus 313 ~~~~~e~~i~~~q~vq~rLa~~~a~~~aar~~~~~aa~~~~~~~~~~~~g~~~~~~~~~~~aa~aK~~at~~a~~~~~~a 392 (661)
T 2ddh_A 313 KQSEPEPQILDFQTQQYKLFPLLATAYAFHFVGRYMKETYLRINESIGQGDLSELPELHALTAGLKAFTTWTANAGIEEC 392 (661)
T ss_dssp STTSCCCBGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----------CCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467788999999999999999999999887776665554321 1223221223578899999999999999999999
Q ss_pred HHHhCccCccCccchhccccccccccccCccHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHhhhhhhcCCCCCccc
Q 048624 428 REACGGHGYAAVNRFGSLRNDHDIFQTFEGDNTVLLQQVAGDLLKQYKEKFQGGPLTVTWNYLRESMNAYLSQPNPVTAR 507 (673)
Q Consensus 428 ~q~~Gg~Gy~~~~~l~r~~rd~~~~~~~eG~~~vl~~~ia~~ll~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 507 (673)
+|+|||+||+.+++++++|||+++.++++|+|+++++++|+.+|+.|++.+++.++.+++.||.+... .+..+++.. .
T Consensus 393 ~q~~GG~G~~~~~~l~r~~rda~~~~~~eG~~~vl~~~iar~lL~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~-~ 470 (661)
T 2ddh_A 393 RMACGGHGYSHSSGIPNIYVTFTPACTFEGENTVMMLQTARFLMKIYDQVRSGKLVGGMVSYLNDLPS-QRIQPQQVA-V 470 (661)
T ss_dssp HHHTTHHHHSGGGSHHHHHHHHGGGGTSSSCHHHHHHHHHHHHHHHHHHHHHTCCCCGGGGGGGGCCC------------
T ss_pred HHHhCcccccccCcHHHHHHhcceeeEecCchHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHhhhh-hhccccccc-c
Confidence 99999999999999999999999999999999999999999999999998888888899999976321 111111111 1
Q ss_pred ccCcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCcc
Q 048624 508 WEGEEHLRDPKFQLDAFRYRTSRLLQSVAVRLRK-HSKTLGSFGAWNRCLNHLLTLAESHIESVILAKFIEAVQNCPDPS 586 (673)
Q Consensus 508 ~~~~~~l~~~~~~~~~~~~r~~~l~~~~~~~l~~-~~~~~~~~~a~n~~~~~~~~~a~A~~e~~~l~~f~~~i~~~~~~~ 586 (673)
..+..++.|+++++++|++|+++++..+++++++ .++|.+.+++||.|+++++++|+||+++++++.|+++|+++++++
T Consensus 471 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~g~~~~~a~n~~~~~~~~~a~a~~~~~~~~~f~~~~~~~~~~~ 550 (661)
T 2ddh_A 471 WPTMVDINSLEGLTEAYKLRAARLVEIAAKNLQTHVSHRKSKEVAWNLTSVDLVRASEAHCHYVVVKVFSDKLPKIQDKA 550 (661)
T ss_dssp ----CCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHGGGCSSHH
T ss_pred ccchhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChh
Confidence 2346789999999999999999999999999987 556778999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhHhhhhccccccccCcCChhhHHHHHHHHHHHHHHhhhhHHHhhhcCCCCcccccCcccc-CchHHH
Q 048624 587 SRAALKLVCDLYALNRIWNDIGTYRNVDYVAPNKAKAIHKLTEYLSFQVRNIAGELIDAFDLPDYVTRAPIAR-QSDAYA 665 (673)
Q Consensus 587 ~~~vL~~L~~Lyal~~i~~~~~~~~~~~~ls~~~~~~l~~~~~~l~~~lrp~a~~Lvdaf~~pd~~l~s~i~~-dg~~Ye 665 (673)
++.+|.+||.||+|+.|++|+|||+++|+||+++++.|++.+.+||.+|||||+.|||+|+|||++|+||||+ ||++||
T Consensus 551 ~~~~L~~l~~L~~l~~i~~~~~~~l~~~~~s~~~~~~~~~~~~~l~~~lrp~av~Lvdaf~~~d~~l~s~lg~~dg~vY~ 630 (661)
T 2ddh_A 551 VQAVLRNLCLLYSLYGISQKGGDFLEGSIITGAQLSQVNARILELLTLIRPNAVALVDAFDFKDMTLGSVLGRYDGNVYE 630 (661)
T ss_dssp HHHHHHHHHHHHHHHHHHHTHHHHHHTTSSCHHHHHHHHHHHHHHHHHHGGGHHHHHHTTCCCHHHHTCSTTCTTCCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCChHHhCchhhccCCHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999 999999
Q ss_pred HHHHhh
Q 048624 666 YYTQIV 671 (673)
Q Consensus 666 ~~~~~~ 671 (673)
+||+++
T Consensus 631 ~l~~~~ 636 (661)
T 2ddh_A 631 NLFEWA 636 (661)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999985
No 2
>1w07_A Acyl-COA oxidase; oxidoreductase, peroxisomal beta-oxidation, FAD cofactor; HET: FAD; 2.0A {Arabidopsis thaliana} SCOP: a.29.3.2 a.29.3.2 e.6.1.2 PDB: 2fon_A*
Probab=100.00 E-value=2.1e-98 Score=861.38 Aligned_cols=607 Identities=29% Similarity=0.445 Sum_probs=519.6
Q ss_pred CccCcC-chHh-hhhhcC-CCHHHHHH-HHHHHhcCCCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCCccccC---CCH
Q 048624 35 SAQNYD-LCAV-IWLYER-KAQGDTRE-SVEYFNSRPDLQTPVEILKDDHRELCWRQLLGLVREAGIKPFKYVA---EDP 107 (673)
Q Consensus 35 ~~~~~~-~~~~-m~~~l~-~e~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~Gl~~~~~p~---~~~ 107 (673)
+|...+ ++++ |+|.++ +|+.++++ +++++.++|.+..... .... .+++.|+.+++.|++.. +|+ .+.
T Consensus 10 er~~~~f~~~~l~~~~~~~~e~~~lr~~vr~~l~~~~~~~~~~~----~~~~-~~~~~~~~l~~~g~l~~-~p~e~G~~~ 83 (659)
T 1w07_A 10 ERNKAEFDVEDMKIVWAGSRHAFEVSDRIARLVASDPVFEKSNR----ARLS-RKELFKSTLRKCAHAFK-RIIELRLNE 83 (659)
T ss_dssp HHTTCSSCHHHHHHHHHSSHHHHHHHHHHHHHHHTCGGGCCTTT----TSSC-HHHHHHHHHHHHHHHHH-HHHHTTCCH
T ss_pred HHccCCCCHHHHHHHHCCChHHHHHHHHHHHHHhcCcccccCCc----cCCC-hHHHHHHHHHHHHHHHH-hHHHhCCCc
Confidence 444443 6665 566666 56788888 8999988876532111 0011 23566777776666553 443 255
Q ss_pred HHHHHHHHHHhccchhhHHHHHHhHhhHHHHHhccCChhhHHhHHhhhhcCCcceeeeccCCCCCCCcCCceeEEEEcCC
Q 048624 108 AQYFAIAEAVGSVDMSLGIKMGVQYSLWGGSVINLGTKKHRDKYYDGIDNLDYPGCFAMTELHHGSNVQGLQTVATFDPI 187 (673)
Q Consensus 108 ~~~~~~~e~la~~~~s~~~~~~~h~~l~~~~i~~~gt~eq~~~~l~~i~~g~~~g~~a~TE~~~Gsd~~~~~TtA~~d~~ 187 (673)
.+...+.++++ .+++ +.+|..+++.+|..+|+++|+++|||++.+|++++|+|+|||+||||+.+++|+|++|++
T Consensus 84 ~~~~~v~e~~~---~~~~--~~~~~~l~~~~l~~~Gt~eqk~~~L~~i~~Ge~~~~~a~TEp~~GSd~~~l~TtA~~d~~ 158 (659)
T 1w07_A 84 EEAGRLRHFID---QPAY--VDLHWGMFVPAIKGQGTEEQQKKWLSLANKMQIIGCYAQTELGHGSNVQGLETTATLDPK 158 (659)
T ss_dssp HHHHHHHHHHC---CCCH--HHHHHHTHHHHHHHHSCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEETT
T ss_pred hHHHHHHHHhc---cchh--hhhHHhHHHHHHHHcCCHHHHHHHhhHHhcCCEEEEEEecCCCCCCCcccceeEEEEcCC
Confidence 66666666653 3443 667877899999999999999999999999999999999999999999999999999987
Q ss_pred CCEEEEecCCCCceeeeccC-ccccCcEEEEEEEEecCCCCCCCCCCCceEEEEEeecCCCCCCCCCCeEEecCCCCcc-
Q 048624 188 KDEFIINTPNDGAIKWWIGN-AAVHGKFATVFAKLMLPTHDSKGYSDMGVHAFIVPIRDMKTHQTLPGIEIHDCGHKVG- 265 (673)
Q Consensus 188 ~~~~vLntP~~~G~K~~i~~-~~~~A~~~vV~Ar~~~~g~~~~~~~~~g~~~FlV~~rd~~~~~~~pGv~v~~~~~~~G- 265 (673)
+|+|+||||+++|+|+||+| +. .|||++|+||++.+++.. |+++|+||++|.++|++.|||+|+++|+++|
T Consensus 159 ~~g~vLntP~~~G~K~~is~~a~-~Ad~~lV~Ar~~~~~~~~------G~~~flVp~r~~~~~~~~pGV~v~~~~~~~G~ 231 (659)
T 1w07_A 159 TDEFVIHTPTQTASKWWPGGLGK-VSTHAVVYARLITNGKDY------GIHGFIVQLRSLEDHSPLPNITVGDIGTKMGN 231 (659)
T ss_dssp TTEEEEECCSGGGSEECCTTTTT-TCSEEEEEEEEEETTEEE------EEEEEEEECBCTTTCCBCTTEEEEECCCBSSS
T ss_pred CCEEEEcCCCCCeEEEeecCCCC-CCCEEEEEEEECCCCCCC------CeEEEEEEccccCCCCCCCCeEEecCccCccc
Confidence 79999999999999999999 66 999999999997654433 8999999998888999999999999999999
Q ss_pred --CCCCCceeEEecceecCcccccccCCcccCCCccccCCcccchHHHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 048624 266 --LNGVDNGALRFCSVRIPRDNLLNRFGDVSRDGKYTSSLPTINKRFAATLGELVGGRVGLAYSSVGVLKIAATIAIRYS 343 (673)
Q Consensus 266 --~~~~~~~~l~fd~v~VP~~~lL~~~~~v~~~G~~~~~~~~~~~g~~~~~~~l~~~rl~~aa~~~G~a~~al~~a~~ya 343 (673)
+++++++.|.||||+||++++||++++|.++|.|.++++++ ...+..+..+|+.+++.++|++++|++++++|+
T Consensus 232 ~~~~g~~~~~v~fd~VrVP~~~lLg~~~~v~~~g~~~~~~~~~----~~~~~~l~~~R~~~aa~~~G~a~~al~~a~~ya 307 (659)
T 1w07_A 232 GAYNSMDNGFLMFDHVRIPRDQMLMRLSKVTREGEYVPSDVPK----QLVYGTMVYVRQTIVADASNALSRAVCIATRYS 307 (659)
T ss_dssp SGGGGSCCEEEEESSEEEEGGGBCCSSEEECTTCCEEECSSCG----GGCTTTTTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCceEEEeccEEECHHHhcCCcCccCCCCceecCCccH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999988888888887654222 244567889999999999999999999999999
Q ss_pred hhccccCC-CCCCcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hccCCcchhhhHHHHHHhHHHHHHHH
Q 048624 344 LLRQQFGP-PRKPEVSILDYQSQQHKLMPMLASTYAFHFATANLVEKYSEM---KKTHDEQLVGDVHALSAGLKSYVTSY 419 (673)
Q Consensus 344 ~~R~qfg~-~~~~e~~i~~~q~vq~~La~~~a~~~a~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~K~~at~~ 419 (673)
++|+|||+ ++++|.||++||.+|++|+++.+.+++++++...+.+.+... .+.++.....+.+..++++|+++++.
T Consensus 308 ~~R~qfg~~~~~~e~pi~~~q~vq~rLa~~~a~~~a~~~~~~~aa~~~~~~~~~~~~g~~~~~~~~~~~~a~aK~~at~~ 387 (659)
T 1w07_A 308 AVRRQFGAHNGGIETQVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTERLAASDFATLPEAHACTAGLKSLTTTA 387 (659)
T ss_dssp HHCBCSCC---CCCCBGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCTTHHHHHHHHHHHHHHHHHH
T ss_pred hcCcccCCCCCCcccchhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCChhhhhhHHHHHHHHHHHHHHH
Confidence 99999997 456788899999999999999999999988877776655332 23333222235788999999999999
Q ss_pred HHHHHHHHHHHhCccCccCccchhccccccccccccCccHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHhhhhhhc
Q 048624 420 TAKSLSVCREACGGHGYAAVNRFGSLRNDHDIFQTFEGDNTVLLQQVAGDLLKQYKEKFQGGPLTVTWNYLRESMNAYLS 499 (673)
Q Consensus 420 a~~~~~~~~q~~Gg~Gy~~~~~l~r~~rd~~~~~~~eG~~~vl~~~ia~~ll~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 499 (673)
+.+++++|+|+|||+||+.+++++++|||+++.++++|+++++++++++.+|+.+++.+++.++.+++.||.+.... ..
T Consensus 388 a~~~~~~a~q~~GG~G~~~~~~l~r~~rda~~~~~~eG~~~v~~~~iar~lL~~~~~~~~~~~~~~~~~~l~~~~~~-~~ 466 (659)
T 1w07_A 388 TADGIEECRKLCGGHGYLWCSGLPELFAVYVPACTYEGDNVVLQLQVARFLMKTVAQLGSGKVPVGTTAYMGRAAHL-LQ 466 (659)
T ss_dssp HHHHHHHHHHTTGGGGGBGGGSHHHHHHHHGGGGTTTSCHHHHHHHHHHHHHHHHTTTTTSCCCCGGGGGGGGHHHH-TS
T ss_pred HHHHHHHHHHHhcCcccccccCHHHHHHhcceeEEEeCChHHHHHHHHHHHHHHHHHHhcCCCCccHHHHHHhhhhh-hc
Confidence 99999999999999999999999999999999999999999999999999999999888777788999999765332 22
Q ss_pred CCCCCcccccCcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 048624 500 QPNPVTARWEGEEHLRDPKFQLDAFRYRTSRLLQSVAVRLRKHSKTLGSFGAWNRCLNHLLTLAESHIESVILAKFIEAV 579 (673)
Q Consensus 500 ~~~~~~~~~~~~~~l~~~~~~~~~~~~r~~~l~~~~~~~l~~~~~~~~~~~a~n~~~~~~~~~a~A~~e~~~l~~f~~~i 579 (673)
.+.+ ..+..+|.|+++++++|++|+++++..+++++++. ++.+++||+|+++++++|+||+++++++.|+++|
T Consensus 467 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~n~~~~~~~~~a~a~~~~~~~~~f~~~~ 539 (659)
T 1w07_A 467 CRSG----VQKAEDWLNPDVVLEAFEARALRMAVTCAKNLSKF---ENQEQGFQELLADLVEAAIAHCQLIVVSKFIAKL 539 (659)
T ss_dssp CCCC----CCSGGGGGCHHHHHHHHHHHHHHHHHHHHHHHTTS---SSHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cccc----cCchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhc---cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2211 12346799999999999999999999999999764 6789999999999999999999999999999999
Q ss_pred HcCC-CccHHHHHHHHHHHHhhHhhhhccccccccCcCChhhHHHHHHHHHHHHHHhhhhHHHhhhcCCCCcccccCccc
Q 048624 580 QNCP-DPSSRAALKLVCDLYALNRIWNDIGTYRNVDYVAPNKAKAIHKLTEYLSFQVRNIAGELIDAFDLPDYVTRAPIA 658 (673)
Q Consensus 580 ~~~~-~~~~~~vL~~L~~Lyal~~i~~~~~~~~~~~~ls~~~~~~l~~~~~~l~~~lrp~a~~Lvdaf~~pd~~l~s~i~ 658 (673)
++++ +++++.+|.+||.||+|+.|++|++||+++||||++|++.|++.+.+||.+|||||+.|||+|+|||++|+||||
T Consensus 540 ~~~~~~~~~~~~l~~l~~l~~l~~i~~~~~~~l~~~~~s~~~~~~~~~~~~~l~~~lrp~av~Lvdaf~~~d~~l~s~lg 619 (659)
T 1w07_A 540 EQDIGGKGVKKQLNNLCYIYALYLLHKHLGDFLSTNCITPKQASLANDQLRSLYTQVRPNAVALVDAFNYTDHYLNSVLG 619 (659)
T ss_dssp TSCCCSTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTSSCHHHHHHHHHHHHHHHHHHGGGHHHHHHTTCCCHHHHTCSTT
T ss_pred HhcCCChHHHHHHHHHHHHHhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHhcChhh
Confidence 9988 899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred c-CchHHHHHHHhh
Q 048624 659 R-QSDAYAYYTQIV 671 (673)
Q Consensus 659 ~-dg~~Ye~~~~~~ 671 (673)
+ ||++||+||+++
T Consensus 620 ~~dg~vY~~l~~~~ 633 (659)
T 1w07_A 620 RYDGNVYPKLFEEA 633 (659)
T ss_dssp CTTCCCHHHHHHHH
T ss_pred ccCcHHHHHHHHHH
Confidence 9 999999999985
No 3
>2z1q_A Acyl-COA dehydrogenase; FAD, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: FAD; 2.30A {Thermus thermophilus}
Probab=100.00 E-value=1e-60 Score=542.13 Aligned_cols=490 Identities=20% Similarity=0.224 Sum_probs=385.1
Q ss_pred cCCCHHHHHH-HHHHHhcCCCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCCccccCC------CHHHHHHHHHHHhccc
Q 048624 49 ERKAQGDTRE-SVEYFNSRPDLQTPVEILKDDHRELCWRQLLGLVREAGIKPFKYVAE------DPAQYFAIAEAVGSVD 121 (673)
Q Consensus 49 l~~e~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~Gl~~~~~p~~------~~~~~~~~~e~la~~~ 121 (673)
+++|++++++ +++++.++ +.+ .....++.....++++|+.+++.||+++.+|++ ++.+...+.|++ ..|
T Consensus 28 ~~~e~~~l~~~~~~~~~~~-~~p--~~~~~~~~~~~~p~~~~~~l~e~Gl~~l~vPee~GG~g~~~~~~~~v~eel-~~~ 103 (577)
T 2z1q_A 28 FDESVKEIARTTRTFVERE-VLP--LLERMEHGELELNVPLMRKAGELGLLAIDVPEEYGGLDLPKVISTVVAEEL-SGS 103 (577)
T ss_dssp CCHHHHHHHHHHHHHHHTT-THH--HHHHHHTTCGGGHHHHHHHHHHTTTTSTTSCGGGTCCCCCHHHHHHHHHHH-TTS
T ss_pred CCHHHHHHHHHHHHHHhcc-Cch--hHHhhhcccCCCCHHHHHHHHHCCCCCcCCChhhCCCCCCHHHHHHHHHHH-hhc
Confidence 5788888888 77777654 211 111111111124589999999999999999965 789999999999 778
Q ss_pred hhhHHHHHHhHhhHHHHHhccCChhhHHhHHhhhhcCCcceeeeccCCCCCCCcCCceeEEEEcCCCCEEEEecCCCCce
Q 048624 122 MSLGIKMGVQYSLWGGSVINLGTKKHRDKYYDGIDNLDYPGCFAMTELHHGSNVQGLQTVATFDPIKDEFIINTPNDGAI 201 (673)
Q Consensus 122 ~s~~~~~~~h~~l~~~~i~~~gt~eq~~~~l~~i~~g~~~g~~a~TE~~~Gsd~~~~~TtA~~d~~~~~~vLntP~~~G~ 201 (673)
+++++.+.+|.+++..+|..+||++||++|||++.+|++++|+++|||++|||+.+++|+|+++++|++|+|| |+
T Consensus 104 ~s~~~~~~~~~~~~~~~l~~~Gt~eQk~~~Lp~l~~G~~~~a~alTEp~aGSD~~~~~t~A~~~~dG~~~vLn-----G~ 178 (577)
T 2z1q_A 104 GGFSVTYGAHTSIGTLPLVYFGTEEQKRKYLPKLASGEWIAAYCLTEPGSGSDALAAKTRATLSEDGKHYILN-----GV 178 (577)
T ss_dssp CTHHHHHHHHHTTTTHHHHHHCCHHHHHTTHHHHHHTSSCEEEECCBTTBSSSGGGCCCEEEECTTSSEEEEE-----EE
T ss_pred ccHHHHHhhhHHHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCCCcccCeeEEEEeCCCCEEEEE-----EE
Confidence 8988888888777777899999999999999999999999999999999999999999999997768899999 99
Q ss_pred eeeccCccccCcEEEEEEEEecCCCCCCCCCCCceEEEEEeecCCCCCCCCCCeEEecCCCCccCCCCCceeEEecceec
Q 048624 202 KWWIGNAAVHGKFATVFAKLMLPTHDSKGYSDMGVHAFIVPIRDMKTHQTLPGIEIHDCGHKVGLNGVDNGALRFCSVRI 281 (673)
Q Consensus 202 K~~i~~~~~~A~~~vV~Ar~~~~g~~~~~~~~~g~~~FlV~~rd~~~~~~~pGv~v~~~~~~~G~~~~~~~~l~fd~v~V 281 (673)
|+||||++ .||+++|+||++ + . |+++|+||. + .|||++++.|+++|+++++++.|.||||+|
T Consensus 179 K~~it~a~-~Ad~~~V~Ar~~--g--~------gis~flVp~-~------~pGv~v~~~~~~~G~~~~~~~~v~fddv~V 240 (577)
T 2z1q_A 179 KQWISNAG-FAHLFTVFAKVD--G--E------HFTAFLVER-D------TPGLSFGPEEKKMGIKASSTRQVILEDVKV 240 (577)
T ss_dssp EEEEETTT-TCSEEEEEEEET--T--T------EEEEEEEET-T------CTTEEECCCCCBSSCTTSCEEEEEEEEEEE
T ss_pred eeCCCCCC-ccCEEEEEEEeC--C--C------eeEEEEEeC-C------CCCeEecCCCCCCCCCCCceeEEEecceec
Confidence 99999999 999999999984 2 3 899999994 4 799999999999999999999999999999
Q ss_pred CcccccccCCcccCCCccccCCcccchHHHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCcccccc
Q 048624 282 PRDNLLNRFGDVSRDGKYTSSLPTINKRFAATLGELVGGRVGLAYSSVGVLKIAATIAIRYSLLRQQFGPPRKPEVSILD 361 (673)
Q Consensus 282 P~~~lL~~~~~v~~~G~~~~~~~~~~~g~~~~~~~l~~~rl~~aa~~~G~a~~al~~a~~ya~~R~qfg~~~~~e~~i~~ 361 (673)
|.+++||. +++|+..++..+..+|+.+++.++|+++++++.+++|+++|+|||+| |++
T Consensus 241 P~~~llg~----------------~g~g~~~~~~~l~~~R~~~aa~~~G~a~~al~~a~~ya~~R~qfg~p------i~~ 298 (577)
T 2z1q_A 241 PVENVLGE----------------IGKGHKIAFNVLNVGRYKLGAGAVGGAKRALELSAQYATQRVQFGRP------IGR 298 (577)
T ss_dssp EGGGEESC----------------TTCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCBCSSSB------GGG
T ss_pred cHHHccCC----------------CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccCCCc------hhh
Confidence 99999985 45678888899999999999999999999999999999999999999 999
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcch------hhhHHHHHHhHHHHHHHHHHHHHHHHHHHhCccC
Q 048624 362 YQSQQHKLMPMLASTYAFHFATANLVEKYSEMKKTHDEQL------VGDVHALSAGLKSYVTSYTAKSLSVCREACGGHG 435 (673)
Q Consensus 362 ~q~vq~~La~~~a~~~a~~~~~~~l~~~~~~~~~~~~~~~------~~~~~~~~~~~K~~at~~a~~~~~~~~q~~Gg~G 435 (673)
||.+|++|++|.+.+++++++.......+..... ++... ..+.+..++++|+++++.+.+++++|+|+|||+|
T Consensus 299 ~q~vq~~La~~~~~~~aar~~~~~aa~~~d~~~~-~~~~~~~~~~~~~~~~~~~a~aK~~ase~a~~v~~~a~qi~GG~G 377 (577)
T 2z1q_A 299 FGLIQQKLGEMASRIYAAESAVYRTVGLIDEALL-GKKGPEAVMAGIEEYAVEASIIKVLGSEVLDYVVDEGVQIHGGYG 377 (577)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCSHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHGGGG
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-ccccchhhhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHhCCee
Confidence 9999999999999999977665554443322111 00000 1345678999999999999999999999999999
Q ss_pred ccCccchhccccccccccccCccHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHhhhhhhcCCCCCcccccCcCCCC
Q 048624 436 YAAVNRFGSLRNDHDIFQTFEGDNTVLLQQVAGDLLKQYKEKFQGGPLTVTWNYLRESMNAYLSQPNPVTARWEGEEHLR 515 (673)
Q Consensus 436 y~~~~~l~r~~rd~~~~~~~eG~~~vl~~~ia~~ll~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~ 515 (673)
|+.+++++++|||+++.++++|+|++++..+++.+++.+.+ + .+. ...++++....+.. |. ....+.
T Consensus 378 ~~~e~~l~r~~Rda~~~~i~eGt~~i~~~~ia~~~l~~~~~---~-~l~-~~~~~~~~~~~~~~---~~-----~~~~l~ 444 (577)
T 2z1q_A 378 YSQEYPIERAYRDARINRIFEGTNEINRLLIPGMLLRRALK---G-QLP-LMQAAQRLQKELLE---PS-----FEEPED 444 (577)
T ss_dssp GBTTSHHHHHHHHHGGGGTTTSCHHHHHHHTTGGGSCC----------------------------------------CC
T ss_pred ecCCChHHHHHhhCcceeeeCcHHHHHHHHHHHHHHHHHhh---c-CCc-HHHHHHHHHHHHcC---CC-----CChhHH
Confidence 99999999999999999999999999999999999865432 1 111 11344332111111 10 123455
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHH
Q 048624 516 DPKFQLDAFRYRTSRLLQSVAVRLRKHSKTLGSFGAWNRCLNHLLTLAESHIESVILAKFIEAVQNCPDPSSRAALKLVC 595 (673)
Q Consensus 516 ~~~~~~~~~~~r~~~l~~~~~~~l~~~~~~~~~~~a~n~~~~~~~~~a~A~~e~~~l~~f~~~i~~~~~~~~~~vL~~L~ 595 (673)
+...+++.+..+...++..+..++.+.-+ ..+..+.++|.+|++.++++.++...++.. +. +..|.+++
T Consensus 445 ~~~~~l~~~~~~~~~~~~~~~~~~~~~l~---------~~q~~l~~lad~~~~~~~~~~~l~r~~~~~-~~-~~~l~~~~ 513 (577)
T 2z1q_A 445 LELHQVQNLKKLALMVAGLAVQKYGQGVE---------EEQEVLGAVADILIDAYAAESALLRARRLG-GL-APVLARIY 513 (577)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHGGGGG---------GCHHHHHHHHHHHHHHHHHHHHHHHHHHHC-TT-HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-Cc-HHHHHHHH
Confidence 66678888888888887777776654111 124578999999999999999999987652 22 55666666
Q ss_pred HHHhhHhhhhc----cccccc
Q 048624 596 DLYALNRIWND----IGTYRN 612 (673)
Q Consensus 596 ~Lyal~~i~~~----~~~~~~ 612 (673)
..+++.+|+.. +..+.+
T Consensus 514 ~~~~~~~~~~~~~~~~~~~~~ 534 (577)
T 2z1q_A 514 LAQALDRAQAGALSVLPRLVE 534 (577)
T ss_dssp HHHHHHHHHHHHHHHGGGTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHc
Confidence 66677777777 544444
No 4
>3owa_A Acyl-COA dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-structure, beta-barrel; HET: MSE FAD 1PE; 1.97A {Bacillus anthracis}
Probab=100.00 E-value=1.6e-58 Score=523.91 Aligned_cols=492 Identities=22% Similarity=0.242 Sum_probs=371.0
Q ss_pred hhcCCCHHHHHH-HHHHHhcCCCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCCccccCC------CHHHHHHHHHHHhc
Q 048624 47 LYERKAQGDTRE-SVEYFNSRPDLQTPVEILKDDHRELCWRQLLGLVREAGIKPFKYVAE------DPAQYFAIAEAVGS 119 (673)
Q Consensus 47 ~~l~~e~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~Gl~~~~~p~~------~~~~~~~~~e~la~ 119 (673)
..+++||+++++ +++|+.++. .+ ...+.++.....++++|+.+.+.||+++.+|++ ++.+...+.|++++
T Consensus 31 ~~lt~eq~~l~~~vr~f~~~~~-~p--~~~~~d~~~~~~~~~~~~~l~e~Gl~gl~vPee~GG~G~~~~~~~~v~Eel~~ 107 (597)
T 3owa_A 31 EDFSSEHKMIAKTTEDFIVNEV-LP--ELEYLEQHEFDRSVRLLKEAGELGLLGADVPEEYGGIGLDKVSSALIAEKFSR 107 (597)
T ss_dssp GGCCHHHHHHHHHHHHHHHHHT-GG--GHHHHTTTCHHHHHHHHHHHHHTTTTCTTSCGGGTCCCCCHHHHHHHHHHHGG
T ss_pred cCCCHHHHHHHHHHHHHHHHhC-ch--hHHHHHhcCCcCCHHHHHHHHHCCCCcCCCChhhCCCCCCHHHHHHHHHHHHc
Confidence 457889999998 777777652 22 222222222234589999999999999999965 88999999999999
Q ss_pred cchhhHHHHHHhHhhHHHHHhccCChhhHHhHHhhhhcCCcceeeeccCCCCCCCcCCceeEEEEcCCCCEEEEecCCCC
Q 048624 120 VDMSLGIKMGVQYSLWGGSVINLGTKKHRDKYYDGIDNLDYPGCFAMTELHHGSNVQGLQTVATFDPIKDEFIINTPNDG 199 (673)
Q Consensus 120 ~~~s~~~~~~~h~~l~~~~i~~~gt~eq~~~~l~~i~~g~~~g~~a~TE~~~Gsd~~~~~TtA~~d~~~~~~vLntP~~~ 199 (673)
.++ .+..+..|.+++...|..+|+++|+++|||++.+|++++|+++|||++|||+.+++|+|+++++|++|+||
T Consensus 108 ~~~-~~~~~~~~~~~~~~~l~~~Gt~eQk~~~Lp~la~Ge~~~a~alTEp~aGSD~~~~~T~A~~~~dG~~yvLn----- 181 (597)
T 3owa_A 108 AGG-FAITHGAHVGIGSLPIVLFGNEEQKKKYLPLLATGEKLAAYALTEPGSGSDALGAKTTARLNAEGTHYVLN----- 181 (597)
T ss_dssp GTH-HHHHHHHHHTTTTHHHHHHCCHHHHHHHHHHHHHTSSCEEEECCBTTBSSSGGGCCCEEEECTTSSEEEEE-----
T ss_pred cch-HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHhCCCcceeeEecCCCCCCCcccceeEEEEeCCCCEEEEe-----
Confidence 864 44455667666677788999999999999999999999999999999999999999999998778899999
Q ss_pred ceeeeccCccccCcEEEEEEEEecCCCCCCCCCCCceEEEEEeecCCCCCCCCCCeEEecCCCCccCCCCCceeEEecce
Q 048624 200 AIKWWIGNAAVHGKFATVFAKLMLPTHDSKGYSDMGVHAFIVPIRDMKTHQTLPGIEIHDCGHKVGLNGVDNGALRFCSV 279 (673)
Q Consensus 200 G~K~~i~~~~~~A~~~vV~Ar~~~~g~~~~~~~~~g~~~FlV~~rd~~~~~~~pGv~v~~~~~~~G~~~~~~~~l~fd~v 279 (673)
|+|+||||++ .||+++|+|+++. . |+++|+||.+ .|||++++.|+++|+++++++.|.||||
T Consensus 182 G~K~~is~a~-~Ad~~lV~Art~~----~------g~s~flV~~~-------~pGv~v~~~~~~~Glrgs~t~~v~fddV 243 (597)
T 3owa_A 182 GEKQWITNSA-FADVFIVYAKIDG----E------HFSAFIVEKD-------YAGVSTSPEEKKMGIKCSSTRTLILEDA 243 (597)
T ss_dssp EEEEEEETTT-TCSEEEEEEEETT----T------EEEEEEEETT-------STTEEECCCCCBSSCTTSCEEEEEEEEE
T ss_pred eEEEEeCCCc-cCCEEEEEEEeCC----C------ceEEEEEeCC-------CCCeEEecccccccCCCCCceEEEEece
Confidence 9999999999 9999999999741 2 8999999964 6999999999999999999999999999
Q ss_pred ecCcccccccCCcccCCCccccCCcccchHHHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCcccc
Q 048624 280 RIPRDNLLNRFGDVSRDGKYTSSLPTINKRFAATLGELVGGRVGLAYSSVGVLKIAATIAIRYSLLRQQFGPPRKPEVSI 359 (673)
Q Consensus 280 ~VP~~~lL~~~~~v~~~G~~~~~~~~~~~g~~~~~~~l~~~rl~~aa~~~G~a~~al~~a~~ya~~R~qfg~~~~~e~~i 359 (673)
+||.+++||. ++.|+...+..+..+|+.+++.++|+++++++.+++|+++|+|||+| |
T Consensus 244 ~VP~~~lLG~----------------~g~G~~~~~~~l~~~R~~~aa~~lG~a~~al~~a~~ya~~R~qfG~p------i 301 (597)
T 3owa_A 244 LVPKENLLGE----------------IGKGHIIAFNILNIGRYKLGVGTVGSAKRAVEISAQYANQRQQFKQP------I 301 (597)
T ss_dssp EEEGGGEESS----------------TTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEE------G
T ss_pred eecHHHhcCc----------------ccchHHHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCCcc------c
Confidence 9999999986 46788889999999999999999999999999999999999999999 9
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcc----------hhhhHHHHHHhHHHHHHHHHHHHHHHHHH
Q 048624 360 LDYQSQQHKLMPMLASTYAFHFATANLVEKYSEMKKTHDEQ----------LVGDVHALSAGLKSYVTSYTAKSLSVCRE 429 (673)
Q Consensus 360 ~~~q~vq~~La~~~a~~~a~~~~~~~l~~~~~~~~~~~~~~----------~~~~~~~~~~~~K~~at~~a~~~~~~~~q 429 (673)
++||.+|++|++|.+.+++++++.....+.+.......... ...+....++++|+++++.+.+++++|+|
T Consensus 302 ~~~q~vq~~LA~m~~~~~aar~l~~~aa~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~aK~~ase~a~~v~~~a~q 381 (597)
T 3owa_A 302 ARFPLIQEKLANMAAKTYAAESSVYRTVGLFESRMSTLSEEEVKDGKAVAASIAEYAIECSLNKVFGSEVLDYTVDEGVQ 381 (597)
T ss_dssp GGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHCHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999997665544444333221111000 00134677899999999999999999999
Q ss_pred HhCccCccCccchhccccccccccccCccHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHhhhhhhcCCCCCccccc
Q 048624 430 ACGGHGYAAVNRFGSLRNDHDIFQTFEGDNTVLLQQVAGDLLKQYKEKFQGGPLTVTWNYLRESMNAYLSQPNPVTARWE 509 (673)
Q Consensus 430 ~~Gg~Gy~~~~~l~r~~rd~~~~~~~eG~~~vl~~~ia~~ll~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 509 (673)
+|||+||+.+++++|+|||+++..+++|++++++..+++.+|+++.+- ..++.....-+.+. ... ..|. . .
T Consensus 382 i~GG~G~~~e~~ler~~RDar~~~i~eGt~ei~r~~Ia~~ll~~~~k~--~~~~~~~~~~~~~~---~~~-~~~~--~-~ 452 (597)
T 3owa_A 382 IHGGYGFMAEYEIERMYRDSRINRIFEGTNEINRLIVPGTFLRKAMKG--ELPLLQKAQKLQEE---LMM-MMPE--E-V 452 (597)
T ss_dssp HHGGGGGBTTSHHHHHHHHHGGGGTSSSCHHHHHHHHHHHHHHHHHTT--SSCHHHHHHHHHHH---HTT-C-----C-C
T ss_pred hhCCccccccChHHHHHHHhhhhheeCcHHHHHHHHHHHHHHHHHhcC--CcchhHHHHHHHHH---Hhh-cCCC--c-c
Confidence 999999999999999999999999999999999999999999877531 11221222222221 111 0110 0 0
Q ss_pred CcCCCCCHHHHHHHHHHHHHHHHHHHHHHH-HhhcCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHcC--C-Cc
Q 048624 510 GEEHLRDPKFQLDAFRYRTSRLLQSVAVRL-RKHSKTLGSFGAWNRCLNHLLTLAESHIESVILAKFIEAVQNC--P-DP 585 (673)
Q Consensus 510 ~~~~l~~~~~~~~~~~~r~~~l~~~~~~~l-~~~~~~~~~~~a~n~~~~~~~~~a~A~~e~~~l~~f~~~i~~~--~-~~ 585 (673)
....|... ...++.. ..++..+...+ ++.++ .+.+-+..+.++|..-++.|++++.+...++. . ..
T Consensus 453 ~~~~l~~~---~~~~~~~-~~~~~~~~~~~~~~~~~------~~~~~q~~l~~~ad~~~~~y~~~~~~~r~~~~~~~~~~ 522 (597)
T 3owa_A 453 GDEPLALQ---KYLVNNA-KKIGLMVAGLAAQKYGK------ALDKEQEILVNIADIVSNLYAMESAVLRTEKAIKTTGL 522 (597)
T ss_dssp CSSTTHHH---HHHHHHH-HHHHHHHHHHHHHHHGG------GGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCS
T ss_pred ccccHHHH---HHHHHHH-HHHHHHHHHHHHHHhCC------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCc
Confidence 11111111 1222222 22222222222 22222 23344557889999999999999888776542 1 22
Q ss_pred cHHHHHHHHHHHH---hhHhhhhc
Q 048624 586 SSRAALKLVCDLY---ALNRIWND 606 (673)
Q Consensus 586 ~~~~vL~~L~~Ly---al~~i~~~ 606 (673)
...+.-..|+++| +..+++..
T Consensus 523 ~~~~~~~~~~~~~~~~~~~~~~~~ 546 (597)
T 3owa_A 523 EKNKQKVLYTEVFCQEAFNEIEAH 546 (597)
T ss_dssp GGGHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHH
Confidence 2223333455555 45555554
No 5
>1ukw_A Acyl-COA dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: FAD; 2.40A {Thermus thermophilus} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=4.5e-59 Score=504.37 Aligned_cols=371 Identities=23% Similarity=0.279 Sum_probs=328.5
Q ss_pred hhhhcCCCHHHHHH-HHHHHhcCCCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCCccccCC------CHHHHHHHHHHH
Q 048624 45 IWLYERKAQGDTRE-SVEYFNSRPDLQTPVEILKDDHRELCWRQLLGLVREAGIKPFKYVAE------DPAQYFAIAEAV 117 (673)
Q Consensus 45 m~~~l~~e~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~Gl~~~~~p~~------~~~~~~~~~e~l 117 (673)
|+|.+++|++++++ +++++.+.. . +...+.++.+. +++++|+.+.+.||+++.+|++ ++.+...++|++
T Consensus 1 M~~~~~~~~~~l~~~~~~~~~~~~--~-~~~~~~d~~~~-~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~~~eel 76 (379)
T 1ukw_A 1 IDFSLTEEQRQLQALARRFAKEVI--L-PVAQEYDEKEE-VPWPVIEKLHEVGLLNAIIPEEYGGMGLKMLDEVIVGEEL 76 (379)
T ss_dssp CBCCCCHHHHHHHHHHHHHHHHTT--G-GGHHHHHHHTC-CCHHHHHHHHHTTCTTTTSCGGGTSCCCCHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhC--c-hhHHHHhhcCC-CCHHHHHHHHHCCCCCcCCChhhCCCCCCHHHHHHHHHHH
Confidence 78899999999998 777775552 2 22233344333 3488999999999999999965 889999999999
Q ss_pred hccchhhHHHHHHhHhhHHHHHhccCChhhHHhHHhhhhcCCcceeeeccCCCCCCCcCCceeEEEEcCCCCEEEEecCC
Q 048624 118 GSVDMSLGIKMGVQYSLWGGSVINLGTKKHRDKYYDGIDNLDYPGCFAMTELHHGSNVQGLQTVATFDPIKDEFIINTPN 197 (673)
Q Consensus 118 a~~~~s~~~~~~~h~~l~~~~i~~~gt~eq~~~~l~~i~~g~~~g~~a~TE~~~Gsd~~~~~TtA~~d~~~~~~vLntP~ 197 (673)
++.|+++++.+.+| .++...|..+|+++|+++|||++.+|++++|+++|||++|||+.+++|+|+++ +|+|+||
T Consensus 77 ~~~~~~~~~~~~~~-~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~--~~g~~ln--- 150 (379)
T 1ukw_A 77 AYACMGIYTIPMAS-DLGITPVLLAGTEEQKERFLRPLTEKPALAAFALSEPGNGSDAAALKTRAIRQ--GDHYVLN--- 150 (379)
T ss_dssp HHHCHHHHHHHHHH-HHHHHHHHHHCCHHHHHHHHGGGTSSSCEEEEECCBTTBSSCGGGCCCEEEEE--TTEEEEE---
T ss_pred HHhCchHHHHHHHH-HHHHHHHHHhCCHHHHHHHHHHHhCCCceEEEEecCCCCCcChhhCeEEEEEe--CCEEEEE---
Confidence 99999998888777 46788899999999999999999999999999999999999999999999998 8999999
Q ss_pred CCceeeeccCccccCcEEEEEEEEecCCCCCCCCCCCceEEEEEeecCCCCCCCCCCeEEecCCCCccCCCCCceeEEec
Q 048624 198 DGAIKWWIGNAAVHGKFATVFAKLMLPTHDSKGYSDMGVHAFIVPIRDMKTHQTLPGIEIHDCGHKVGLNGVDNGALRFC 277 (673)
Q Consensus 198 ~~G~K~~i~~~~~~A~~~vV~Ar~~~~g~~~~~~~~~g~~~FlV~~rd~~~~~~~pGv~v~~~~~~~G~~~~~~~~l~fd 277 (673)
|+|+|+||+. .|||++|+|++..+++. +|+++|+||.+ .|||++.+.|+++|+++++++.|.||
T Consensus 151 --G~K~~~s~~~-~Ad~~~v~a~~~~~~~~------~g~~~flV~~~-------~~Gv~v~~~~~~~G~~~~~~~~v~fd 214 (379)
T 1ukw_A 151 --GTKMWISNGG-EAEWVVVFATVNPELRH------KGVVALVVERG-------TPGFKAIKIHGKMGQRASGTYELVFE 214 (379)
T ss_dssp --EEEEEEETTT-TEEEEEEEEESCGGGGG------GGEEEEEEETT-------CTTEEEEECCCCSSCTTSCEEEEEEE
T ss_pred --EEEecccCCC-cCCEEEEEEEcCCCCCC------CceEEEEEeCC-------CCCeEecCccccccCCCCCeeEEEEe
Confidence 9999999999 99999999998643222 38999999964 69999999999999999999999999
Q ss_pred ceecCcccccccCCcccCCCccccCCcccchHHHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCcc
Q 048624 278 SVRIPRDNLLNRFGDVSRDGKYTSSLPTINKRFAATLGELVGGRVGLAYSSVGVLKIAATIAIRYSLLRQQFGPPRKPEV 357 (673)
Q Consensus 278 ~v~VP~~~lL~~~~~v~~~G~~~~~~~~~~~g~~~~~~~l~~~rl~~aa~~~G~a~~al~~a~~ya~~R~qfg~~~~~e~ 357 (673)
||+||.+++||. ++.|+...+..+..+|+.+++.++|+++++++.+++|+++|+|||+|
T Consensus 215 ~v~Vp~~~~lg~----------------~~~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~~~~ya~~R~~fg~~----- 273 (379)
T 1ukw_A 215 DVKVPVENRLGE----------------EGEGFKIAMQTLNKTRIPVAAGSVGVARRALDEARKYAKEREAFGEP----- 273 (379)
T ss_dssp EEEEEGGGEESC----------------TTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCBSSSSB-----
T ss_pred eEEecHHhcCCC----------------CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCCcc-----
Confidence 999999999975 45678888889999999999999999999999999999999999999
Q ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchhhhHHHHHHhHHHHHHHHHHHHHHHHHHHhCccCcc
Q 048624 358 SILDYQSQQHKLMPMLASTYAFHFATANLVEKYSEMKKTHDEQLVGDVHALSAGLKSYVTSYTAKSLSVCREACGGHGYA 437 (673)
Q Consensus 358 ~i~~~q~vq~~La~~~a~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~K~~at~~a~~~~~~~~q~~Gg~Gy~ 437 (673)
|+++|.+|++|++|.+.+++++++ ++.+++..+.+ .+....++++|.++++.+.++++.|+|+|||+||+
T Consensus 274 -i~~~q~vq~~la~~~~~~~aar~~----~~~aa~~~d~g-----~~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~ 343 (379)
T 1ukw_A 274 -IANFQAIQFKLVDMLIGIETARMY----TYYAAWLADQG-----LPHAHASAIAKAYASEIAFEAANQAIQIHGGYGYV 343 (379)
T ss_dssp -GGGSHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHT-----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGS
T ss_pred -hhhhHHHHHHHHHHHHHHHHHHHH----HHHHHHHHhCC-----CchHHHHHHHHHHHHHHHHHHHHHHHHhhCCeecC
Confidence 999999999999999999996544 45555555554 23456789999999999999999999999999999
Q ss_pred CccchhccccccccccccCccHHHHHHHHHHHHHH
Q 048624 438 AVNRFGSLRNDHDIFQTFEGDNTVLLQQVAGDLLK 472 (673)
Q Consensus 438 ~~~~l~r~~rd~~~~~~~eG~~~vl~~~ia~~ll~ 472 (673)
.+++++++|||++...+++|++++++..+++.+|+
T Consensus 344 ~~~~~~r~~Rda~~~~i~~Gt~~i~~~~ia~~~l~ 378 (379)
T 1ukw_A 344 REFPVEKLLRDVKLNQIYEGTNEIQRLIIARHILA 378 (379)
T ss_dssp TTSSHHHHHHHHHGGGTTTSCHHHHHHHHHHHHHC
T ss_pred CCChHHHHHHHhcCceecCCHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999998874
No 6
>2d29_A Acyl-COA dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; HET: FAD; 1.65A {Thermus thermophilus} SCOP: a.29.3.1 e.6.1.1 PDB: 1ws9_A 2cx9_A*
Probab=100.00 E-value=5.8e-59 Score=504.87 Aligned_cols=376 Identities=22% Similarity=0.291 Sum_probs=330.2
Q ss_pred hhhhcCCCHHHHHH-HHHHHhcCCCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCCccccCC------CHHHHHHHHHHH
Q 048624 45 IWLYERKAQGDTRE-SVEYFNSRPDLQTPVEILKDDHRELCWRQLLGLVREAGIKPFKYVAE------DPAQYFAIAEAV 117 (673)
Q Consensus 45 m~~~l~~e~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~Gl~~~~~p~~------~~~~~~~~~e~l 117 (673)
|+|.+++|++++++ +++++.++. . +...+.++.+. +++++|+.+.+.||+++.+|++ ++.+.+.++|++
T Consensus 3 m~~~~~~~~~~l~~~~~~~~~~~~--~-~~~~~~d~~~~-~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eel 78 (387)
T 2d29_A 3 LWFEEGAEERQVLGPFREFLKAEV--A-PGAAERDRTGA-FPWDLVRKLAEFGVFGALVPEAYGGAGLSTRLFARMVEAI 78 (387)
T ss_dssp CTTSCCHHHHHHHHHHHHHHHHHT--G-GGHHHHHHHCC-CCHHHHHHHHTTTGGGSSSCGGGTCCCCCHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhc--c-hhHHHHhhcCC-CCHHHHHHHHHCCCCCCCCChhhCCCCCCHHHHHHHHHHH
Confidence 88999999999988 777775542 2 22223344333 3488999999999999999965 889999999999
Q ss_pred hccchhhHHHHHHhHhhHHHHHhccCChhhHHhHHhhhhcCCcceeeeccCCCCCCCcCCceeEEEEcCCCCEEEEecCC
Q 048624 118 GSVDMSLGIKMGVQYSLWGGSVINLGTKKHRDKYYDGIDNLDYPGCFAMTELHHGSNVQGLQTVATFDPIKDEFIINTPN 197 (673)
Q Consensus 118 a~~~~s~~~~~~~h~~l~~~~i~~~gt~eq~~~~l~~i~~g~~~g~~a~TE~~~Gsd~~~~~TtA~~d~~~~~~vLntP~ 197 (673)
++.|+++++.+.+|..++...|..+|+++|+++|||++.+|+.++|+++|||++|||+.+++|+|+++ +|+|+||
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~--~~g~~ln--- 153 (387)
T 2d29_A 79 AYYDGALALTVASHNSLATGHILLAGSEAQKEAFLPKLASGEALGAWGLTEPGSGSDAAALKTKAEKV--EGGWRLN--- 153 (387)
T ss_dssp HHHCHHHHHHHHHHHHTHHHHHHHHCCHHHHHHHHHHHHTSSSCEEEECCBTTBSSSGGGCCCEEEEE--TTEEEEE---
T ss_pred HhhChHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCCceEEEEeCCCCCCCCHhhCceEEEEe--CCEEEEE---
Confidence 99999998887877667788999999999999999999999999999999999999999999999998 8999999
Q ss_pred CCceeeeccCccccCcEEEEEEEEecCCCCCCCCCCCceEEEEEeecCCCCCCCCCCeEEecCCCCccCCCCCceeEEec
Q 048624 198 DGAIKWWIGNAAVHGKFATVFAKLMLPTHDSKGYSDMGVHAFIVPIRDMKTHQTLPGIEIHDCGHKVGLNGVDNGALRFC 277 (673)
Q Consensus 198 ~~G~K~~i~~~~~~A~~~vV~Ar~~~~g~~~~~~~~~g~~~FlV~~rd~~~~~~~pGv~v~~~~~~~G~~~~~~~~l~fd 277 (673)
|+|+|+||+. .|||++|+|++..++.. .++++|+++|+||.+ .|||++.+.|+++|+++++++.|.||
T Consensus 154 --G~K~~~s~~~-~Ad~~~v~a~~~~~~~~--~~~~~g~~~flV~~~-------~pGv~v~~~~~~~g~~~~~~~~v~f~ 221 (387)
T 2d29_A 154 --GTKQFITQGS-VAGVYVVMARTDPPPSP--ERKHQGISAFAFFRP-------ERGLKVGRKEEKLGLTASDTAQLILE 221 (387)
T ss_dssp --EEEEEEETTT-TCSEEEEEEECSCCSCG--GGTTTTEEEEEEECC-------SSSEEECCCCCCSSCTTSCEEEEEEE
T ss_pred --eEEeccCCCC-cCCEEEEEEEeCCcccc--CCCCCCeEEEEEeCC-------CCCeeccCcccccCCCCCCeeEEEEe
Confidence 9999999999 99999999998633200 001238999999964 69999999999999999999999999
Q ss_pred ceecCcccccccCCcccCCCccccCCcccchHHHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCcc
Q 048624 278 SVRIPRDNLLNRFGDVSRDGKYTSSLPTINKRFAATLGELVGGRVGLAYSSVGVLKIAATIAIRYSLLRQQFGPPRKPEV 357 (673)
Q Consensus 278 ~v~VP~~~lL~~~~~v~~~G~~~~~~~~~~~g~~~~~~~l~~~rl~~aa~~~G~a~~al~~a~~ya~~R~qfg~~~~~e~ 357 (673)
||+||.+++||. ++.|+...+..+..+|+.+++.++|+++++++.+++|+++|+|||+|
T Consensus 222 ~v~Vp~~~~lg~----------------~~~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~~----- 280 (387)
T 2d29_A 222 DLFVPEEALLGE----------------RGKGFYDVLRVLDGGRIGIAAMAVGLGQAALDYALAYAKGREAFGRP----- 280 (387)
T ss_dssp EEEEEGGGEESS----------------TTBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEE-----
T ss_pred eEEECHHHcCCC----------------CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccCCcc-----
Confidence 999999999985 45688888889999999999999999999999999999999999999
Q ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchhhhHHHHHHhHHHHHHHHHHHHHHHHHHHhCccCcc
Q 048624 358 SILDYQSQQHKLMPMLASTYAFHFATANLVEKYSEMKKTHDEQLVGDVHALSAGLKSYVTSYTAKSLSVCREACGGHGYA 437 (673)
Q Consensus 358 ~i~~~q~vq~~La~~~a~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~K~~at~~a~~~~~~~~q~~Gg~Gy~ 437 (673)
|+++|.+|++|+++.+.+++++++ ++.+++..+.+ .+....++++|.++++.+.++++.|+|+|||.||+
T Consensus 281 -i~~~q~vq~~la~~~~~~~aar~~----~~~aa~~~~~g-----~~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~ 350 (387)
T 2d29_A 281 -IAEFEGVSFKLAEAATELEAARLL----YLKAAELKDAG-----RPFTLEAAQAKLFASEAAVKACDEAIQILGGYGYV 350 (387)
T ss_dssp -GGGSHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHTT-----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGS
T ss_pred -hHhhHHHHHHHHHHHHHHHHHHHH----HHHHHHHHhCC-----CCchHHHHHHHHHHHHHHHHHHHHHHHhcCCeecC
Confidence 999999999999999999996544 45555555554 23456789999999999999999999999999999
Q ss_pred CccchhccccccccccccCccHHHHHHHHHHHHHH
Q 048624 438 AVNRFGSLRNDHDIFQTFEGDNTVLLQQVAGDLLK 472 (673)
Q Consensus 438 ~~~~l~r~~rd~~~~~~~eG~~~vl~~~ia~~ll~ 472 (673)
.+++++|+|||+++..+++|++++++..+++.+++
T Consensus 351 ~~~~~~r~~Rda~~~~i~~G~~~i~~~~ia~~~l~ 385 (387)
T 2d29_A 351 KDYPVERYWRDARLTRIGEGTSEILKLVIARRLLE 385 (387)
T ss_dssp TTSSHHHHHHHHGGGGTTTSCHHHHHHHHHHHHHH
T ss_pred CCChHHHHHHHhhCccccCCHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999885
No 7
>2jif_A Short/branched chain specific acyl-COA dehydrogen; mitochondrion, oxidoreductase, transit peptide, fatty acid metabolism, FAD, flavoprotein; HET: FAD COS; 2.0A {Homo sapiens}
Probab=100.00 E-value=4.4e-59 Score=508.05 Aligned_cols=373 Identities=21% Similarity=0.320 Sum_probs=329.5
Q ss_pred hhhhhcCCCHHHHHH-HHHHHhcCCCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCCccccCC------CHHHHHHHHHH
Q 048624 44 VIWLYERKAQGDTRE-SVEYFNSRPDLQTPVEILKDDHRELCWRQLLGLVREAGIKPFKYVAE------DPAQYFAIAEA 116 (673)
Q Consensus 44 ~m~~~l~~e~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~Gl~~~~~p~~------~~~~~~~~~e~ 116 (673)
.|+|.+++|++++++ +++|+.++. . +...+.++.+. .++++|+.+.+.||+++.+|++ ++.+.+.++|+
T Consensus 24 ~~~~~~~~e~~~l~~~~r~~~~~~~--~-p~~~~~d~~~~-~~~~~~~~l~e~Gl~~l~~P~e~GG~g~~~~~~~~v~ee 99 (404)
T 2jif_A 24 APLQTFTDEEMMIKSSVKKFAQEQI--A-PLVSTMDENSK-MEKSVIQGLFQQGLMGIEVDPEYGGTGASFLSTVLVIEE 99 (404)
T ss_dssp CCTTCCCHHHHHHHHHHHHHHHHHT--G-GGHHHHHHHTC-CCHHHHHHHHHTTTTSSSSCGGGTCCCCCHHHHHHHHHH
T ss_pred cccCCCCHHHHHHHHHHHHHHHHhC--c-ccHHHHhhcCC-CCHHHHHHHHHCCCCccCCchhhCCCCCCHHHHHHHHHH
Confidence 467889999999999 777776652 2 22223344333 3588999999999999999965 88999999999
Q ss_pred HhccchhhHHHHHHhHhhHHHHHhccCChhhHHhHHhhhhcCCcceeeeccCCCCCCCcCCceeEEEEcCCCCEEEEecC
Q 048624 117 VGSVDMSLGIKMGVQYSLWGGSVINLGTKKHRDKYYDGIDNLDYPGCFAMTELHHGSNVQGLQTVATFDPIKDEFIINTP 196 (673)
Q Consensus 117 la~~~~s~~~~~~~h~~l~~~~i~~~gt~eq~~~~l~~i~~g~~~g~~a~TE~~~Gsd~~~~~TtA~~d~~~~~~vLntP 196 (673)
+++.|+++++.+.+|..++..+|..+|+++|+++|||++.+|. ++|+++|||++|||+..++|+|+++ +|+|+||
T Consensus 100 l~~~~~~~~~~~~~~~~~~~~~l~~~g~~~qk~~~l~~~~~g~-~~~~a~tEp~~Gsd~~~~~t~A~~~--g~g~vln-- 174 (404)
T 2jif_A 100 LAKVDASVAVFCEIQNTLINTLIRKHGTEEQKATYLPQLTTEK-VGSFCLSEAGAGSDSFALKTRADKE--GDYYVLN-- 174 (404)
T ss_dssp HHTTCHHHHHHHHHHHHTHHHHHHHHCCHHHHHHHHHHHHHTC-CEEEECCBTTBSSSGGGCCCEEEEE--TTEEEEE--
T ss_pred HHhcCcHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCC-cceEEecCCCCCCChhhceeEEEEe--CCEEEEE--
Confidence 9999999998888887777888999999999999999999985 8999999999999999999999998 8999999
Q ss_pred CCCceeeeccCccccCcEEEEEEEEecCCCCCCCCCCCceEEEEEeecCCCCCCCCCCeEEecCCCCccCCCCCceeEEe
Q 048624 197 NDGAIKWWIGNAAVHGKFATVFAKLMLPTHDSKGYSDMGVHAFIVPIRDMKTHQTLPGIEIHDCGHKVGLNGVDNGALRF 276 (673)
Q Consensus 197 ~~~G~K~~i~~~~~~A~~~vV~Ar~~~~g~~~~~~~~~g~~~FlV~~rd~~~~~~~pGv~v~~~~~~~G~~~~~~~~l~f 276 (673)
|+|+||||+. .||+++|+|++..+++. +|+++|+||.+ .|||++.+.|+++|+++++++.|.|
T Consensus 175 ---G~K~~is~a~-~Ad~~~v~ar~~~~~~~------~g~~~flV~~~-------~pGv~v~~~~~~~G~~~~~~~~v~f 237 (404)
T 2jif_A 175 ---GSKMWISSAE-HAGLFLVMANVDPTIGY------KGITSFLVDRD-------TPGLHIGKPENKLGLRASSTCPLTF 237 (404)
T ss_dssp ---EEEEEEETTT-TCSEEEEEEESCGGGGG------GGEEEEEEETT-------CTTEEECCCCCBSSCTTSCEEEEEE
T ss_pred ---eEEEeecCCc-ccCEEEEEEEeCCCCCC------CceEEEEEecC-------CCCeEeccCcccccCCCCceEEEEE
Confidence 9999999999 99999999998543222 38999999964 6999999999999999999999999
Q ss_pred cceecCcccccccCCcccCCCccccCCcccchHHHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCc
Q 048624 277 CSVRIPRDNLLNRFGDVSRDGKYTSSLPTINKRFAATLGELVGGRVGLAYSSVGVLKIAATIAIRYSLLRQQFGPPRKPE 356 (673)
Q Consensus 277 d~v~VP~~~lL~~~~~v~~~G~~~~~~~~~~~g~~~~~~~l~~~rl~~aa~~~G~a~~al~~a~~ya~~R~qfg~~~~~e 356 (673)
|||+||.+++||. ++.|+...+..+..+|+.+++.++|+++++++.+++|+++|+|||+|
T Consensus 238 d~v~Vp~~~~lg~----------------~g~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fG~~---- 297 (404)
T 2jif_A 238 ENVKVPEANILGQ----------------IGHGYKYAIGSLNEGRIGIAAQMLGLAQGCFDYTIPYIKERIQFGKR---- 297 (404)
T ss_dssp EEEEEEGGGEESS----------------TTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEE----
T ss_pred ccEEECHHHcCCC----------------CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCc----
Confidence 9999999999985 45678888889999999999999999999999999999999999999
Q ss_pred ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchhhhHHHHHHhHHHHHHHHHHHHHHHHHHHhCccCc
Q 048624 357 VSILDYQSQQHKLMPMLASTYAFHFATANLVEKYSEMKKTHDEQLVGDVHALSAGLKSYVTSYTAKSLSVCREACGGHGY 436 (673)
Q Consensus 357 ~~i~~~q~vq~~La~~~a~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~K~~at~~a~~~~~~~~q~~Gg~Gy 436 (673)
|+++|.+|++|++|.+.+++++++ ++.+++..+.+ .+....++++|+++++.+.++++.|+|+|||.||
T Consensus 298 --i~~~q~vq~~la~~~~~~~aar~~----~~~aa~~~~~g-----~~~~~~~~~aK~~a~e~a~~v~~~a~q~~Gg~G~ 366 (404)
T 2jif_A 298 --LFDFQGLQHQVAHVATQLEAARLL----TYNAARLLEAG-----KPFIKEASMAKYYASEIAGQTTSKCIEWMGGVGY 366 (404)
T ss_dssp --GGGSHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHTT-----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGG
T ss_pred --ccccHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHCC-----CccHHHHHHHHHHHHHHHHHHHHHHHHhcCccee
Confidence 999999999999999999996544 45555555655 2334568999999999999999999999999999
Q ss_pred cCccchhccccccccccccCccHHHHHHHHHHHHHHH
Q 048624 437 AAVNRFGSLRNDHDIFQTFEGDNTVLLQQVAGDLLKQ 473 (673)
Q Consensus 437 ~~~~~l~r~~rd~~~~~~~eG~~~vl~~~ia~~ll~~ 473 (673)
+.+++++++|||+++..+++|++++++..+++.+++.
T Consensus 367 ~~~~~~~r~~Rda~~~~i~~Gt~ei~~~~ia~~~~~~ 403 (404)
T 2jif_A 367 TKDYPVEKYFRDAKIGTIYEGASNIQLNTIAKHIDAE 403 (404)
T ss_dssp BTTSSHHHHHHHHGGGGTTTSCHHHHHHHHHHHHHHH
T ss_pred cCCCcHHHHHhhccceeecCCHHHHHHHHHHHHHhhc
Confidence 9999999999999999999999999999999999864
No 8
>2vig_A Short-chain specific acyl-COA dehydrogenase,; fatty acid metabolism, FAD, polymorphism, flavoprotein, mitochondrion, disease mutation; HET: FAD COS; 1.9A {Homo sapiens} PDB: 1jqi_A*
Probab=100.00 E-value=9.7e-59 Score=503.69 Aligned_cols=377 Identities=23% Similarity=0.342 Sum_probs=329.1
Q ss_pred hhhhhcCCCHHHHHH-HHHHHhcCCCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCCccccCC------CHHHHHHHHHH
Q 048624 44 VIWLYERKAQGDTRE-SVEYFNSRPDLQTPVEILKDDHRELCWRQLLGLVREAGIKPFKYVAE------DPAQYFAIAEA 116 (673)
Q Consensus 44 ~m~~~l~~e~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~Gl~~~~~p~~------~~~~~~~~~e~ 116 (673)
.|+|.+++|++++++ +++++.++. . +...+.++.+. +++++|+.+.+.||+++.+|++ ++.+...+.|+
T Consensus 1 m~~~~~~~~~~~l~~~~r~~~~~~~--~-~~~~~~d~~~~-~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~ee 76 (391)
T 2vig_A 1 MQSVELPETHQMLLQTCRDFAEKEL--F-PIAAQVDKEHL-FPAAQVKKMGGLGLLAMDVPEELGGAGLDYLAYAIAMEE 76 (391)
T ss_dssp -----CCHHHHHHHHHHHHHHHHHT--T-TTHHHHHHHTC-CCHHHHHHHHHHTTTSTTSCGGGTSCCCCHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHhC--c-ccHHHHHhcCC-CCHHHHHHHHHCCCCCCCCCHhhCCCCCCHHHHHHHHHH
Confidence 378999999999988 777775542 1 12223344333 3488999999999999999965 88999999999
Q ss_pred HhccchhhHHHHHHhHhhHHHHHhccCChhhHHhHHhhhhcCCcceeeeccCCCCCCCcCCceeEEEEcCCCCEEEEecC
Q 048624 117 VGSVDMSLGIKMGVQYSLWGGSVINLGTKKHRDKYYDGIDNLDYPGCFAMTELHHGSNVQGLQTVATFDPIKDEFIINTP 196 (673)
Q Consensus 117 la~~~~s~~~~~~~h~~l~~~~i~~~gt~eq~~~~l~~i~~g~~~g~~a~TE~~~Gsd~~~~~TtA~~d~~~~~~vLntP 196 (673)
+++.|+++++.+.+|..++...|..+|+++|+++|||++.+|+.++|+++|||++|||+.+++|+|+++ +|+|+||
T Consensus 77 l~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~--~~g~~ln-- 152 (391)
T 2vig_A 77 ISRGCASTGVIMSVNNSLYLGPILKFGSKEQKQAWVTPFTSGDKIGCFALSEPGNGSDAGAASTTARAE--GDSWVLN-- 152 (391)
T ss_dssp HHHHCHHHHHHHHHHHHTTHHHHHHHCCHHHHHHHTGGGSSSSCCEEEECCBTTBSSSGGGCCCEEEEE--TTEEEEE--
T ss_pred HHhhccHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCCceEEEEecCCCCCCCcccceeEEEEe--CCEEEEe--
Confidence 999999998888887556788899999999999999999999999999999999999999999999998 8999999
Q ss_pred CCCceeeeccCccccCcEEEEEEEEecCCCCCCCCCCCceEEEEEeecCCCCCCCCCCeEEecCCCCccCCCCCceeEEe
Q 048624 197 NDGAIKWWIGNAAVHGKFATVFAKLMLPTHDSKGYSDMGVHAFIVPIRDMKTHQTLPGIEIHDCGHKVGLNGVDNGALRF 276 (673)
Q Consensus 197 ~~~G~K~~i~~~~~~A~~~vV~Ar~~~~g~~~~~~~~~g~~~FlV~~rd~~~~~~~pGv~v~~~~~~~G~~~~~~~~l~f 276 (673)
|+|+||||+. .|||++|+|+++.+++. +|+++|+||.+ .|||++.+.|+++|+++++++.|.|
T Consensus 153 ---G~K~~~s~~~-~Ad~~~v~a~~~~~~~~------~g~~~flV~~~-------~pGv~v~~~~~~~g~r~~~~~~v~f 215 (391)
T 2vig_A 153 ---GTKAWITNAW-EASAAVVFASTDRALQN------KSISAFLVPMP-------TPGLTLGKKEDKLGIRGSSTANLIF 215 (391)
T ss_dssp ---EEEEEEETTT-TCSEEEEEEECCSSSTT------SCEEEEEEESS-------CTTEEECCCCCBSSCTTSCEEEEEE
T ss_pred ---eEEEeecCCC-cCCEEEEEEEeCCCCCC------CceEEEEEeCC-------CCCeEecCccccccCCCCCeeEEEE
Confidence 9999999999 99999999998643222 38999999964 6999999999999999999999999
Q ss_pred cceecCcccccccCCcccCCCccccCCcccchHHHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCc
Q 048624 277 CSVRIPRDNLLNRFGDVSRDGKYTSSLPTINKRFAATLGELVGGRVGLAYSSVGVLKIAATIAIRYSLLRQQFGPPRKPE 356 (673)
Q Consensus 277 d~v~VP~~~lL~~~~~v~~~G~~~~~~~~~~~g~~~~~~~l~~~rl~~aa~~~G~a~~al~~a~~ya~~R~qfg~~~~~e 356 (673)
|||+||.+++||. ++.|+...+..+..+|+.+++.++|+++++++.+++|+++|+|||+|
T Consensus 216 d~v~Vp~~~~lg~----------------~g~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~~---- 275 (391)
T 2vig_A 216 EDCRIPKDSILGE----------------PGMGFKIAMQTLDMGRIGIASQALGIAQTALDCAVNYAENRMAFGAP---- 275 (391)
T ss_dssp EEEEEEGGGEESS----------------TTBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEE----
T ss_pred CcEEECHHHcCCC----------------CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccCCCc----
Confidence 9999999999986 46688888889999999999999999999999999999999999999
Q ss_pred ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchhhhHHHHHHhHHHHHHHHHHHHHHHHHHHhCccCc
Q 048624 357 VSILDYQSQQHKLMPMLASTYAFHFATANLVEKYSEMKKTHDEQLVGDVHALSAGLKSYVTSYTAKSLSVCREACGGHGY 436 (673)
Q Consensus 357 ~~i~~~q~vq~~La~~~a~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~K~~at~~a~~~~~~~~q~~Gg~Gy 436 (673)
|+++|.+|++|++|.+.+++++++ ++.+++..+.+ .+....++++|.++++.+.++++.|+|+|||.||
T Consensus 276 --i~~~q~v~~~la~~~~~~~aar~~----~~~aa~~~~~g-----~~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~ 344 (391)
T 2vig_A 276 --LTKLQVIQFKLADMALALESARLL----TWRAAMLKDNK-----KPFIKEAAMAKLAASEAATAISHQAIQILGGMGY 344 (391)
T ss_dssp --GGGSHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHTT-----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGG
T ss_pred --chhhHHHHHHHHHHHHHHHHHHHH----HHHHHHHHhCC-----CCchHHHHHHHHHHHHHHHHHHHHHHHhhCCeEe
Confidence 999999999999999999996544 45555555554 2245678999999999999999999999999999
Q ss_pred cCccchhccccccccccccCccHHHHHHHHHHHHHHHHHH
Q 048624 437 AAVNRFGSLRNDHDIFQTFEGDNTVLLQQVAGDLLKQYKE 476 (673)
Q Consensus 437 ~~~~~l~r~~rd~~~~~~~eG~~~vl~~~ia~~ll~~~~~ 476 (673)
+.+++++++|||+++..+++|++++++..+++.+++.|++
T Consensus 345 ~~~~~~~r~~Rda~~~~i~~G~~~~~~~~ia~~~l~~~~~ 384 (391)
T 2vig_A 345 VTEMPAERHYRDARITEIYEGTSEIQRLVIAGHLLRSYRS 384 (391)
T ss_dssp BTTSSHHHHHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHC
T ss_pred cCCChHHHHHHHhhcceeecCHHHHHHHHHHHHHHhhccc
Confidence 9999999999999999999999999999999999988753
No 9
>3pfd_A Acyl-COA dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: FDA; 2.10A {Mycobacterium thermoresistibile}
Probab=100.00 E-value=2.7e-59 Score=508.39 Aligned_cols=376 Identities=23% Similarity=0.296 Sum_probs=321.7
Q ss_pred chHhhhhhcCCCHHHHHH-HHHHHhcCCCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCCccccCC------CHHHHHHH
Q 048624 41 LCAVIWLYERKAQGDTRE-SVEYFNSRPDLQTPVEILKDDHRELCWRQLLGLVREAGIKPFKYVAE------DPAQYFAI 113 (673)
Q Consensus 41 ~~~~m~~~l~~e~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~Gl~~~~~p~~------~~~~~~~~ 113 (673)
.+..|+|.+++||+++++ +++++.++. . +...+.++.+. +++++|+.+.+.||+++.+|++ ++.+++.+
T Consensus 11 ~p~~m~~~~~~e~~~l~~~~r~~~~~~~--~-~~~~~~d~~~~-~~~~~~~~l~~~G~~~~~~P~~~GG~g~~~~~~~~v 86 (393)
T 3pfd_A 11 NPSFELFQLPEEHIALREAIRALAEKEI--A-PYAAEVDEKAR-FPEEALAALNSSGFSAIHVPEEYGGQGADSVATCIV 86 (393)
T ss_dssp -----------CHHHHHHHHHHHHHHHT--G-GGHHHHHHTTC-CCHHHHHHHHHHTCSCTTSCGGGTCCCCCHHHHHHH
T ss_pred CCcccCCCCCHHHHHHHHHHHHHHHHhC--c-hHHHHHhhhCC-CCHHHHHHHHHCCCCCCCCChhHCCCCCCHHHHHHH
Confidence 445699999999999998 777776652 2 22223444444 4589999999999999999975 89999999
Q ss_pred HHHHhccchhhHHHHHHhHhhHHHHHhccCChhhHHhHHhhhhcCCcceeeeccCCCCCCCcCCceeEEEEcCCCCEEEE
Q 048624 114 AEAVGSVDMSLGIKMGVQYSLWGGSVINLGTKKHRDKYYDGIDNLDYPGCFAMTELHHGSNVQGLQTVATFDPIKDEFII 193 (673)
Q Consensus 114 ~e~la~~~~s~~~~~~~h~~l~~~~i~~~gt~eq~~~~l~~i~~g~~~g~~a~TE~~~Gsd~~~~~TtA~~d~~~~~~vL 193 (673)
+|++++.|+++++.+..|. ++...|..+|+++|+++|||++.+|+.++|+++|||++|||+.+++|+|+++ +|+|+|
T Consensus 87 ~eela~~~~~~~~~~~~~~-~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~gsd~~~~~t~A~~~--~~g~~l 163 (393)
T 3pfd_A 87 IEEVARVDCSASLIPAVNK-LGTMGLILRGSEELKKQVLPAVASGEAMASYALSEREAGSDAASMRTRAVAD--GDDWIL 163 (393)
T ss_dssp HHHHHTTCHHHHHHHHHHH-HTTHHHHHHCCHHHHHHHHHHHHTTSCCEEEECCBTTBSSCGGGCCCEEEEE--TTEEEE
T ss_pred HHHHHhhCchHHHHHHHHH-HHHHHHHHhCCHHHHHHHHHHHhCCCceeEEEEcCCCCCCCcccCeeEEEEc--CCEEEE
Confidence 9999999999988776664 5667788999999999999999999999999999999999999999999999 899999
Q ss_pred ecCCCCceeeeccCccccCcEEEEEEEEecCCCCCCCCCCCceEEEEEeecCCCCCCCCCCeEEecCCCCccCCCCCcee
Q 048624 194 NTPNDGAIKWWIGNAAVHGKFATVFAKLMLPTHDSKGYSDMGVHAFIVPIRDMKTHQTLPGIEIHDCGHKVGLNGVDNGA 273 (673)
Q Consensus 194 ntP~~~G~K~~i~~~~~~A~~~vV~Ar~~~~g~~~~~~~~~g~~~FlV~~rd~~~~~~~pGv~v~~~~~~~G~~~~~~~~ 273 (673)
| |+|+|+||+. .|||++|+|++..+++. .|+++|+||.+ .|||++.+.|+++|+++++++.
T Consensus 164 n-----G~K~~~s~~~-~Ad~~~v~a~~~~~~~~------~g~~~flV~~~-------~pGv~v~~~~~~~G~~~~~~~~ 224 (393)
T 3pfd_A 164 N-----GSKCWITNGG-KSTWYTVMAVTDPDKGA------NGISAFMVHKD-------DEGFTVGPKERKLGIKGSPTTE 224 (393)
T ss_dssp E-----EEEEEEETTT-TCSEEEEEEESCGGGGG------GGEEEEEEETT-------STTEEEEEECCBSSCTTSCEEE
T ss_pred e-----eEEEEecCCc-ccCEEEEEEEeCCCCCC------CceEEEEEECC-------CCCeEecCCCCcccCCCCCceE
Confidence 9 9999999999 99999999998654322 38999999965 5999999999999999999999
Q ss_pred EEecceecCcccccccCCcccCCCccccCCcccchHHHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCC
Q 048624 274 LRFCSVRIPRDNLLNRFGDVSRDGKYTSSLPTINKRFAATLGELVGGRVGLAYSSVGVLKIAATIAIRYSLLRQQFGPPR 353 (673)
Q Consensus 274 l~fd~v~VP~~~lL~~~~~v~~~G~~~~~~~~~~~g~~~~~~~l~~~rl~~aa~~~G~a~~al~~a~~ya~~R~qfg~~~ 353 (673)
|.||||+||.+++||. ++.|+...+..+..+|+.+++.++|+++++++.+++|+++|+|||+|
T Consensus 225 v~fddv~Vp~~~~lg~----------------~g~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~~a~~R~~fg~~- 287 (393)
T 3pfd_A 225 LYFENCRIPGDRIIGE----------------PGTGFKTALATLDHTRPTIGAQAVGIAQGALDAAIAYTKERKQFGRP- 287 (393)
T ss_dssp EEEEEEEEEGGGEESS----------------TTCHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEE-
T ss_pred EEEccEEEcHHHcCCC----------------CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCcc-
Confidence 9999999999999985 46788888999999999999999999999999999999999999999
Q ss_pred CCcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchhhhHHHHHHhHHHHHHHHHHHHHHHHHHHhCc
Q 048624 354 KPEVSILDYQSQQHKLMPMLASTYAFHFATANLVEKYSEMKKTHDEQLVGDVHALSAGLKSYVTSYTAKSLSVCREACGG 433 (673)
Q Consensus 354 ~~e~~i~~~q~vq~~La~~~a~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~K~~at~~a~~~~~~~~q~~Gg 433 (673)
|+++|.+|++|++|.+.+++++++ ++.+++..+.+. .+....++++|+++++.+.++++.|+|+|||
T Consensus 288 -----i~~~q~vq~~la~~~~~~~aar~~----~~~aa~~~~~~~----~~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg 354 (393)
T 3pfd_A 288 -----VSDNQGVQFMLADMAMKIEAARLM----VYSAAARAERGE----GDLGFISAASKCFASDVAMEVTTDAVQLFGG 354 (393)
T ss_dssp -----GGGSHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHC--------CHHHHHHHHHHHHHHHHHHHHHHHHTGG
T ss_pred -----hhhhHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHCCC----cchHHHHHHHHHHHHHHHHHHHHHHHHHhch
Confidence 999999999999999999996544 455555555542 2255678999999999999999999999999
Q ss_pred cCccCccchhccccccccccccCccHHHHHHHHHHHHHH
Q 048624 434 HGYAAVNRFGSLRNDHDIFQTFEGDNTVLLQQVAGDLLK 472 (673)
Q Consensus 434 ~Gy~~~~~l~r~~rd~~~~~~~eG~~~vl~~~ia~~ll~ 472 (673)
.||+.+++++|+|||+++..+++|++++++..|++.+|+
T Consensus 355 ~g~~~~~~~~r~~Rda~~~~i~~Gt~ei~~~~ia~~ll~ 393 (393)
T 3pfd_A 355 YGYTQDFPVERMMRDAKITQIYEGTNQIQRVVMSRALLR 393 (393)
T ss_dssp GGGBTTSSHHHHHHHHHHHTTSSSCHHHHHHHHHHHHTC
T ss_pred hhccCCChHHHHHHhhcceeeecCHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999873
No 10
>3p4t_A Putative acyl-COA dehydrogenase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: FAO; 1.70A {Mycobacterium smegmatis} PDB: 3oib_A*
Probab=100.00 E-value=8.6e-59 Score=505.97 Aligned_cols=384 Identities=21% Similarity=0.221 Sum_probs=329.1
Q ss_pred cCCCCccCcCchHhhhhhcCCCHHHHHH-HHHHHhcCCCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCCccccCC----
Q 048624 31 LMAPSAQNYDLCAVIWLYERKAQGDTRE-SVEYFNSRPDLQTPVEILKDDHRELCWRQLLGLVREAGIKPFKYVAE---- 105 (673)
Q Consensus 31 ~~~~~~~~~~~~~~m~~~l~~e~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~Gl~~~~~p~~---- 105 (673)
.+++--..-+.+..|++.+++|++++++ +++++.++. . +...+.++.+. +++++|+.+.+.||+++.+|++
T Consensus 8 ~~~~~~~~~~~~~~M~~~~~~e~~~l~~~~r~~~~~~~--~-~~~~~~d~~~~-~~~~~~~~l~~~Gl~~l~~P~e~GG~ 83 (403)
T 3p4t_A 8 HMGTLEAQTQGPGSMSIWTTAEREALRKTVRAFAEREV--L-PHAHEWERAGE-IPRELHRKAAELGLLGAGFPEDAGGS 83 (403)
T ss_dssp ---------------CTTSSHHHHHHHHHHHHHHHHHT--T-TTHHHHHHHTS-CCHHHHHHHHHTTCTTBTSCGGGTCC
T ss_pred cccchhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHhC--c-hhHHHHhhcCC-CCHHHHHHHHHCCCCcCCCChhhCCC
Confidence 3433333344666799999999999999 777776652 2 12233444444 4589999999999999999975
Q ss_pred --CHHHHHHHHHHHhccchhh-HHHHHHhHhhHHHHHhccCChhhHHhHHhhhhcCCcceeeeccCCCCCCCcCCceeEE
Q 048624 106 --DPAQYFAIAEAVGSVDMSL-GIKMGVQYSLWGGSVINLGTKKHRDKYYDGIDNLDYPGCFAMTELHHGSNVQGLQTVA 182 (673)
Q Consensus 106 --~~~~~~~~~e~la~~~~s~-~~~~~~h~~l~~~~i~~~gt~eq~~~~l~~i~~g~~~g~~a~TE~~~Gsd~~~~~TtA 182 (673)
++.+.+.++|++++.|+++ ++.+.+|..++...|..+|+++|+++|||++.+|+.++|+++|||++|||+.+++|+|
T Consensus 84 g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~Gsd~~~~~t~A 163 (403)
T 3p4t_A 84 GGDGADPVVICEEMHYAGSPGGVYASLFTCGIAVPHMIASGDQRLIDTYVRPTLRGEKIGALAITEPGGGSDVGHLRTRA 163 (403)
T ss_dssp BCCTHHHHHHHHHHHHTTCCHHHHHHHSTHHHHSHHHHHHTCHHHHHHTHHHHHTTSSCEEEECCBTTBSSCGGGCCCEE
T ss_pred CCCHHHHHHHHHHHHHhCCchhhhHHHhhhhhHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCCCcccceEEE
Confidence 8899999999999999998 7777777767788899999999999999999999999999999999999999999999
Q ss_pred EEcCCCCEEEEecCCCCceeeeccCccccCcEEEEEEEEecCCCCCCCCCCCceEEEEEeecCCCCCCCCCCeEEecCCC
Q 048624 183 TFDPIKDEFIINTPNDGAIKWWIGNAAVHGKFATVFAKLMLPTHDSKGYSDMGVHAFIVPIRDMKTHQTLPGIEIHDCGH 262 (673)
Q Consensus 183 ~~d~~~~~~vLntP~~~G~K~~i~~~~~~A~~~vV~Ar~~~~g~~~~~~~~~g~~~FlV~~rd~~~~~~~pGv~v~~~~~ 262 (673)
+++ +|+|+|| |+|+|++++. .||+++|+|++..+ +. +|+++|+||.+ .|||++.+.|+
T Consensus 164 ~~~--~~g~~ln-----G~K~~vs~a~-~Ad~~~v~a~~~~~-~~------~g~~~flV~~~-------~pGv~v~~~~~ 221 (403)
T 3p4t_A 164 DLD--GDHYVIN-----GAKTYITSGV-RADYVVTAARTGGP-GA------GGVSLIVVDKG-------TPGFEVTRKLD 221 (403)
T ss_dssp EEE--TTEEEEE-----EEEEEEETTT-TCSEEEEEEECSSS-SG------GGEEEEEEETT-------CTTEEEEEECC
T ss_pred EEe--CCEEEEE-----EEEEEecCCc-ccCEEEEEEEeCCC-CC------CceEEEEEeCC-------CCCeEecCCCC
Confidence 999 8999999 9999999999 99999999998653 22 38999999965 59999999999
Q ss_pred CccCCCCCceeEEecceecCcccccccCCcccCCCccccCCcccchHHHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 048624 263 KVGLNGVDNGALRFCSVRIPRDNLLNRFGDVSRDGKYTSSLPTINKRFAATLGELVGGRVGLAYSSVGVLKIAATIAIRY 342 (673)
Q Consensus 263 ~~G~~~~~~~~l~fd~v~VP~~~lL~~~~~v~~~G~~~~~~~~~~~g~~~~~~~l~~~rl~~aa~~~G~a~~al~~a~~y 342 (673)
++|+++++++.|.||||+||.+++||. ++.|+...+..+..+|+.+++.++|+++++++.+++|
T Consensus 222 ~~G~~~~~~~~v~fddv~Vp~~~~lg~----------------~~~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~~ 285 (403)
T 3p4t_A 222 KMGWRSSDTAELSYTDVRVPVANLVGS----------------ENTGFAQIAAAFVAERVGLATQAYAGAQRCLDLTVEW 285 (403)
T ss_dssp BSSCTTSCEEEEEEEEEEEEGGGEESS----------------TTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCCeeEEEEcceEecHHHcCCC----------------CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999975 4678888889999999999999999999999999999
Q ss_pred hhhccccCCCCCCcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchhhhHHHHHHhHHHHHHHHHHH
Q 048624 343 SLLRQQFGPPRKPEVSILDYQSQQHKLMPMLASTYAFHFATANLVEKYSEMKKTHDEQLVGDVHALSAGLKSYVTSYTAK 422 (673)
Q Consensus 343 a~~R~qfg~~~~~e~~i~~~q~vq~~La~~~a~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~K~~at~~a~~ 422 (673)
+++|+|||+| |+++|.+|++|++|.+.+++++++ ++.+++..+.+. ......++++|+++++.+.+
T Consensus 286 a~~R~~fg~p------i~~~q~vq~~la~~~~~~~aar~~----~~~aa~~~d~~~----~~~~~~~~~aK~~a~~~a~~ 351 (403)
T 3p4t_A 286 CRNRDTFGRP------LISRQAVQNTLAGMARRIDVARVY----TRHVVERQLAGE----TNLIAEVCFAKNTAVEAGEW 351 (403)
T ss_dssp HHHCEETTEE------GGGSHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHTTC----CCCHHHHHHHHHHHHHHHHH
T ss_pred HHhCccCCCc------ccccHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHCCC----CCchhHHHHHHHHHHHHHHH
Confidence 9999999999 999999999999999999995544 455555566552 12256789999999999999
Q ss_pred HHHHHHHHhCccCccCccchhccccccccccccCccHHHHHHHHHHHH
Q 048624 423 SLSVCREACGGHGYAAVNRFGSLRNDHDIFQTFEGDNTVLLQQVAGDL 470 (673)
Q Consensus 423 ~~~~~~q~~Gg~Gy~~~~~l~r~~rd~~~~~~~eG~~~vl~~~ia~~l 470 (673)
+++.|+|+|||.||+.+++++++|||+++..+++|++++++..+++.+
T Consensus 352 v~~~a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~ei~~~~ia~~l 399 (403)
T 3p4t_A 352 VANQAVQLFGGMGYMAESEVERQYRDMRILGIGGGTTEILTSLAAKTL 399 (403)
T ss_dssp HHHHHHHHHGGGGGBTTSHHHHHHHHHTTTTTTTSCHHHHHHHHHHHH
T ss_pred HHHHHHHhhChhhccCCCcHHHHHHHhhcceeccCHHHHHHHHHHHHc
Confidence 999999999999999999999999999999999999999999999876
No 11
>1egd_A Medium chain acyl-COA dehydrogenase; flavoprotein, electron transfer; HET: FAD; 2.40A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1 PDB: 1egc_A* 1ege_A* 1t9g_A* 2a1t_A* 1udy_A* 3mdd_A* 3mde_A*
Probab=100.00 E-value=1e-58 Score=504.45 Aligned_cols=377 Identities=20% Similarity=0.259 Sum_probs=329.8
Q ss_pred hhhhhcCCCHHHHHH-HHHHHhcCCCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCCccccCC------CHHHHHHHHHH
Q 048624 44 VIWLYERKAQGDTRE-SVEYFNSRPDLQTPVEILKDDHRELCWRQLLGLVREAGIKPFKYVAE------DPAQYFAIAEA 116 (673)
Q Consensus 44 ~m~~~l~~e~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~Gl~~~~~p~~------~~~~~~~~~e~ 116 (673)
.|+|.+++|++++++ +++++.++. . +...+.++.+. +++++|+.+.+.||+++.+|++ ++.+.+.++|+
T Consensus 11 ~m~~~~~~~~~~l~~~~r~~~~~~~--~-~~~~~~d~~~~-~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~ee 86 (396)
T 1egd_A 11 GFSFEFTEQQKEFQATARKFAREEI--I-PVAAEYDKTGE-YPVPLIRRAWELGLMNTHIPENCGGLGLGTFDACLISEE 86 (396)
T ss_dssp EEECCCCHHHHHHHHHHHHHHHHHT--H-HHHHHHHHHCC-CCHHHHHHHHHHTCSSTTSCGGGTSCCCCHHHHHHHHHH
T ss_pred cCCCCCCHHHHHHHHHHHHHHHHhC--c-hhHHHHHhhCC-CCHHHHHHHHHCCCCCCCCchhhCCCCCCHHHHHHHHHH
Confidence 589999999999988 777775542 1 12223333333 3488999999999999999965 78999999999
Q ss_pred HhccchhhHHHHHHhHhhHHHHHhccCChhhHHhHHhhhhcCCcceeeeccCCCCCCCcCCceeEEEEcCCCCEEEEecC
Q 048624 117 VGSVDMSLGIKMGVQYSLWGGSVINLGTKKHRDKYYDGIDNLDYPGCFAMTELHHGSNVQGLQTVATFDPIKDEFIINTP 196 (673)
Q Consensus 117 la~~~~s~~~~~~~h~~l~~~~i~~~gt~eq~~~~l~~i~~g~~~g~~a~TE~~~Gsd~~~~~TtA~~d~~~~~~vLntP 196 (673)
+++.|+++++.+ .|..++...|..+|+++|+++|||++.+|+.++|+++|||++|||+..++|+|+++ +|+|+||
T Consensus 87 l~~~~~~~~~~~-~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~--~~g~~ln-- 161 (396)
T 1egd_A 87 LAYGCTGVQTAI-EGNSLGQMPIIIAGNDQQKKKYLGRMTEEPLMCAYCVTEPGAGSDVAGIKTKAEKK--GDEYIIN-- 161 (396)
T ss_dssp HHHHCHHHHHHH-HHHHHHTHHHHHHCCHHHHHHHHHHHHHSCCCEEEECCBTTBSSSGGGCCCEEEEC--SSEEEEE--
T ss_pred HHhhCccHHHHH-HhhhHHHHHHHHhCCHHHHHHHHHHHhCCCceEEEEecCCCCCcchhhCeeEEEEe--CCEEEEE--
Confidence 999999988876 67666677788999999999999999999999999999999999999999999998 8999999
Q ss_pred CCCceeeeccCccccCcEEEEEEEEecCCCCCCCCCCCceEEEEEeecCCCCCCCCCCeEEecCCCCccCCCCCceeEEe
Q 048624 197 NDGAIKWWIGNAAVHGKFATVFAKLMLPTHDSKGYSDMGVHAFIVPIRDMKTHQTLPGIEIHDCGHKVGLNGVDNGALRF 276 (673)
Q Consensus 197 ~~~G~K~~i~~~~~~A~~~vV~Ar~~~~g~~~~~~~~~g~~~FlV~~rd~~~~~~~pGv~v~~~~~~~G~~~~~~~~l~f 276 (673)
|+|+|+||+. .|||++|+|++..+++. ++++|+++|+||.+ .|||++.+.|+++|+++++++.|.|
T Consensus 162 ---G~K~~~s~~~-~Ad~~~v~a~~~~~~~~---~~~~g~~~flV~~~-------~pGv~v~~~~~~~G~~~~~~~~v~f 227 (396)
T 1egd_A 162 ---GQKMWITNGG-KANWYFLLARSDPDPKA---PANKAFTGFIVEAD-------TPGIQIGRKELNMGQRCSDTRGIVF 227 (396)
T ss_dssp ---EEEEEEETTT-TCSEEEEEEECCCCTTS---CGGGTEEEEEEETT-------CTTEEECCCCCBSSCTTSCEEEEEE
T ss_pred ---EEEEcccCCc-ccCEEEEEEEeCCCCCC---CCCCCeEEEEEeCC-------CCCeeeCCccccccccCCCeeEEEE
Confidence 9999999999 99999999998643222 01138999999964 6999999999999999999999999
Q ss_pred cceecCcccccccCCcccCCCccccCCcccchHHHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCc
Q 048624 277 CSVRIPRDNLLNRFGDVSRDGKYTSSLPTINKRFAATLGELVGGRVGLAYSSVGVLKIAATIAIRYSLLRQQFGPPRKPE 356 (673)
Q Consensus 277 d~v~VP~~~lL~~~~~v~~~G~~~~~~~~~~~g~~~~~~~l~~~rl~~aa~~~G~a~~al~~a~~ya~~R~qfg~~~~~e 356 (673)
|||+||.+++||. ++.|+...+..+..+|+.+++.++|+++++++.+++|+++|+|||+|
T Consensus 228 d~v~Vp~~~~lg~----------------~~~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fG~~---- 287 (396)
T 1egd_A 228 EDVKVPKENVLIG----------------DGAGFKVAMGAFDKERPVVAAGAVGLAQRALDEATKYALERKTFGKL---- 287 (396)
T ss_dssp EEEEEEGGGBSSS----------------TTBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEETTEE----
T ss_pred CcEEECHHHcCCC----------------CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCcc----
Confidence 9999999999975 46788888889999999999999999999999999999999999999
Q ss_pred ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchhhhHHHHHHhHHHHHHHHHHHHHHHHHHHhCccCc
Q 048624 357 VSILDYQSQQHKLMPMLASTYAFHFATANLVEKYSEMKKTHDEQLVGDVHALSAGLKSYVTSYTAKSLSVCREACGGHGY 436 (673)
Q Consensus 357 ~~i~~~q~vq~~La~~~a~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~K~~at~~a~~~~~~~~q~~Gg~Gy 436 (673)
|+++|.+|++|++|.+.+++++++ ++.+++..+.+ .+....++++|.++++.+.++++.|+|+|||.||
T Consensus 288 --i~~~q~vq~~la~~~~~~~aar~~----~~~aa~~~~~g-----~~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~ 356 (396)
T 1egd_A 288 --LVEHQAISFMLAEMAMKVELARMS----YQRAAWEVDSG-----RRNTYYASIAKAFAGDIANQLATDAVQILGGNGF 356 (396)
T ss_dssp --GGGSHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHTT-----SCCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTT
T ss_pred --hhhhHHHHHHHHHHHHHHHHHHHH----HHHHHHHHhCC-----CcchHHHHHHHHHHHHHHHHHHHHHHHHhCcccc
Confidence 999999999999999999995544 45555555655 2345578999999999999999999999999999
Q ss_pred cCccchhccccccccccccCccHHHHHHHHHHHHHHHH
Q 048624 437 AAVNRFGSLRNDHDIFQTFEGDNTVLLQQVAGDLLKQY 474 (673)
Q Consensus 437 ~~~~~l~r~~rd~~~~~~~eG~~~vl~~~ia~~ll~~~ 474 (673)
+.+++++++|||+++..+++|++++++..+++.+++.|
T Consensus 357 ~~~~~l~r~~Rda~~~~i~~Gt~~i~~~~ia~~~l~~~ 394 (396)
T 1egd_A 357 NTEYPVEKLMRDAKIYQIYGGTSQIQRLIVAREHIDKY 394 (396)
T ss_dssp BTTSSHHHHHHHHGGGGTTTSCHHHHHHHHHHHHHHTT
T ss_pred cCCChHHHHHHHhhCeeecCCHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999998754
No 12
>1buc_A Butyryl-COA dehydrogenase; acyl-COA dehydrogenase short-chain acyl-COA dehydrogenase, flavoprotein, oxidoreductase; HET: CAA FAD; 2.50A {Megasphaera elsdenii} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=2.2e-58 Score=499.74 Aligned_cols=372 Identities=25% Similarity=0.334 Sum_probs=328.4
Q ss_pred hhhhcCCCHHHHHH-HHHHHhcCCCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCCccccC---------CCHHHHHHHH
Q 048624 45 IWLYERKAQGDTRE-SVEYFNSRPDLQTPVEILKDDHRELCWRQLLGLVREAGIKPFKYVA---------EDPAQYFAIA 114 (673)
Q Consensus 45 m~~~l~~e~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~Gl~~~~~p~---------~~~~~~~~~~ 114 (673)
|+|.+++|++++++ +++++.++ + . +...+.++... +++++|+.+.+.||+++.+|+ .++.+...++
T Consensus 1 M~~~~~~~~~~l~~~~~~~~~~~-~-~-~~~~~~d~~~~-~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~~~~v~ 76 (383)
T 1buc_A 1 MDFNLTDIQQDFLKLAHDFGEKK-L-A-PTVTERDHKGI-YDKELIDELLSLGITGAYFEEKYGGSGDDGGDVLSYILAV 76 (383)
T ss_dssp CBCCCCHHHHHHHHHHHHHHHHT-T-T-TTHHHHHHHTC-CCHHHHHHHHTTSGGGTTSCGGGTCGGGGTCCHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHh-C-c-hhHHHHhhcCC-CCHHHHHHHHHCCCCCCCCChhhCCCCCCCCCHHHHHHHH
Confidence 78899999999998 77777655 2 2 12223344333 348899999999999999994 4678999999
Q ss_pred HHHhccchhhHHHHHHhHhhHHHHHhccCChhhHHhHHhhhhcCCcceeeeccCCCCCCCcCCceeEEEEcCCCCEEEEe
Q 048624 115 EAVGSVDMSLGIKMGVQYSLWGGSVINLGTKKHRDKYYDGIDNLDYPGCFAMTELHHGSNVQGLQTVATFDPIKDEFIIN 194 (673)
Q Consensus 115 e~la~~~~s~~~~~~~h~~l~~~~i~~~gt~eq~~~~l~~i~~g~~~g~~a~TE~~~Gsd~~~~~TtA~~d~~~~~~vLn 194 (673)
|++++.|+++++.+.+|..++...|..+|+++|+++|||++.+|+.++|+++|||++|||+.+++|+|++++ +|+|+||
T Consensus 77 eel~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~-~~g~~ln 155 (383)
T 1buc_A 77 EELAKYDAGVAITLSATVSLCANPIWQFGTEAQKEKFLVPLVEGTKLGAFGLTEPNAGTDASGQQTIATKND-DGTYTLN 155 (383)
T ss_dssp HHHHHHCHHHHHHHHHHHHHTHHHHHHHCCHHHHHHTHHHHHHTSSCEEEECCBTTBSSCGGGCCCEEEECT-TSCEEEE
T ss_pred HHHHhhChHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHhCCCeeEEEEeCCCCCCCChhhCEeEEEEcC-CCEEEEE
Confidence 999999999998888886677889999999999999999999999999999999999999999999999874 6889999
Q ss_pred cCCCCceeeeccCccccCcEEEEEEEEecCCCCCCCCCCCceEEEEEeecCCCCCCCCCCeEEecCCCCccCCCCCceeE
Q 048624 195 TPNDGAIKWWIGNAAVHGKFATVFAKLMLPTHDSKGYSDMGVHAFIVPIRDMKTHQTLPGIEIHDCGHKVGLNGVDNGAL 274 (673)
Q Consensus 195 tP~~~G~K~~i~~~~~~A~~~vV~Ar~~~~g~~~~~~~~~g~~~FlV~~rd~~~~~~~pGv~v~~~~~~~G~~~~~~~~l 274 (673)
|+|+|+||+. .|||++|+|++..+++. +|+++|+||.+ .|||++.+.|+++|+++++++.|
T Consensus 156 -----G~K~~~s~~~-~Ad~~~v~a~~~~~~~~------~g~~~flV~~~-------~~Gv~v~~~~~~~g~~~~~~~~v 216 (383)
T 1buc_A 156 -----GSKIFITNGG-AADIYIVFAMTDKSKGN------HGITAFILEDG-------TPGFTYGKKEDKMGIHTSQTMEL 216 (383)
T ss_dssp -----EEEEEEETTT-TCSEEEEEEESCSSSST------TSEEEEEEETT-------CTTEEEEEECCCSSCTTSCEEEE
T ss_pred -----EEEeccCCCC-cCCEEEEEEEeCCCCCC------CceEEEEEECC-------CCCeEecCccccccccCCceeEE
Confidence 9999999999 99999999998643322 38999999954 69999999999999999999999
Q ss_pred EecceecCcccccccCCcccCCCccccCCcccchHHHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCC
Q 048624 275 RFCSVRIPRDNLLNRFGDVSRDGKYTSSLPTINKRFAATLGELVGGRVGLAYSSVGVLKIAATIAIRYSLLRQQFGPPRK 354 (673)
Q Consensus 275 ~fd~v~VP~~~lL~~~~~v~~~G~~~~~~~~~~~g~~~~~~~l~~~rl~~aa~~~G~a~~al~~a~~ya~~R~qfg~~~~ 354 (673)
.||||+||.+++||. ++.++...+..+..+|+.+++.++|+++++++.+++|+++|+|||+|
T Consensus 217 ~f~~v~Vp~~~~lg~----------------~g~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~~~~ya~~R~~fG~~-- 278 (383)
T 1buc_A 217 VFQDVKVPAENMLGE----------------EGKGFKIAMMTLDGGRIGVAAQALGIAEAALADAVEYSKQRVQFGKP-- 278 (383)
T ss_dssp EEEEEEECGGGEESC----------------TTBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEE--
T ss_pred EEccEEeCHHHcCCC----------------CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCCcc--
Confidence 999999999999985 45688888888999999999999999999999999999999999999
Q ss_pred CcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchhhhHHHHHHhHHHHHHHHHHHHHHHHHHHhCcc
Q 048624 355 PEVSILDYQSQQHKLMPMLASTYAFHFATANLVEKYSEMKKTHDEQLVGDVHALSAGLKSYVTSYTAKSLSVCREACGGH 434 (673)
Q Consensus 355 ~e~~i~~~q~vq~~La~~~a~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~K~~at~~a~~~~~~~~q~~Gg~ 434 (673)
|+++|.+|++|++|.+.+++++++ ++.+++..+.+ .+....++++|.++++.+.++++.|+|+|||.
T Consensus 279 ----i~~~q~vq~~la~~~~~~~~ar~~----~~~aa~~~~~g-----~~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~ 345 (383)
T 1buc_A 279 ----LCKFQSISFKLADMKMQIEAARNL----VYKAACKKQEG-----KPFTVDAAIAKRVASDVAMRVTTEAVQIFGGY 345 (383)
T ss_dssp ----GGGSHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHT-----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred ----hhhhHHHHHHHHHHHHHHHHHHHH----HHHHHHHHhCC-----CchHHHHHHHHHHHHHHHHHHHHHHHHhcCCe
Confidence 999999999999999999996544 45555555554 33467789999999999999999999999999
Q ss_pred CccCccchhccccccccccccCccHHHHHHHHHHHHH
Q 048624 435 GYAAVNRFGSLRNDHDIFQTFEGDNTVLLQQVAGDLL 471 (673)
Q Consensus 435 Gy~~~~~l~r~~rd~~~~~~~eG~~~vl~~~ia~~ll 471 (673)
||+.+++++++|||++...+++|++++++..+++.+|
T Consensus 346 g~~~~~~~~r~~Rda~~~~i~~Gt~~i~~~~ia~~~l 382 (383)
T 1buc_A 346 GYSEEYPVARHMRDAKITQIYEGTNEVQLMVTGGALL 382 (383)
T ss_dssp GGSTTSSHHHHHHHHGGGGTTTSCHHHHHHHHHHHHT
T ss_pred ecCCCChHHHHHHHhhcccccCCHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999876
No 13
>1ivh_A Isovaleryl-COA dehydrogenase; oxidoreductase, acyl-COA dehydrogenase, flavoprotein, isovaleric acidemia; HET: FAD COS; 2.60A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=3e-58 Score=500.39 Aligned_cols=374 Identities=21% Similarity=0.300 Sum_probs=327.8
Q ss_pred hhcCCCHHHHHH-HHHHHhcCCCCCCCccCCHHHHHHHHHH--HHHHHHHHcCCCCccccCC------CHHHHHHHHHHH
Q 048624 47 LYERKAQGDTRE-SVEYFNSRPDLQTPVEILKDDHRELCWR--QLLGLVREAGIKPFKYVAE------DPAQYFAIAEAV 117 (673)
Q Consensus 47 ~~l~~e~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~e~Gl~~~~~p~~------~~~~~~~~~e~l 117 (673)
|.+++|++++++ +++++.++. . +...+.++.+.. +. ++|+.+.+.||+++.+|++ ++.+.+.++|++
T Consensus 11 ~~~~~e~~~l~~~~r~~~~~~~--~-~~~~~~d~~~~~-~~~~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eel 86 (394)
T 1ivh_A 11 NGLSEEQRQLRQTMAKFLQEHL--A-PKAQEIDRSNEF-KNLREFWKQLGNLGVLGITAPVQYGGSGLGYLEHVLVMEEI 86 (394)
T ss_dssp GTCCHHHHHHHHHHHHHHHHHT--T-TTHHHHHHHTCC-TTHHHHHHHHHHHTCTTTTSCGGGTCCCCCHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHHHhC--C-hhHHHHHhcCCC-CchHHHHHHHHHCCCCCCCCCcccCCCCCCHHHHHHHHHHH
Confidence 668999999998 777776542 2 122233333332 35 8999999999999999965 789999999999
Q ss_pred hccchhhHHHHHHhHhhHHHHHhccCChhhHHhHHhhhhcCCcceeeeccCCCCCCCcCCceeEEEEcCCCCEEEEecCC
Q 048624 118 GSVDMSLGIKMGVQYSLWGGSVINLGTKKHRDKYYDGIDNLDYPGCFAMTELHHGSNVQGLQTVATFDPIKDEFIINTPN 197 (673)
Q Consensus 118 a~~~~s~~~~~~~h~~l~~~~i~~~gt~eq~~~~l~~i~~g~~~g~~a~TE~~~Gsd~~~~~TtA~~d~~~~~~vLntP~ 197 (673)
++.|+++++.+.+|..++...|..+|+++|+++|||++.+|++++|+++|||++|||+..++|+|+++ +|+|+||
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~l~~G~~~~~~a~tEp~~gsd~~~~~t~A~~~--~~g~~ln--- 161 (394)
T 1ivh_A 87 SRASGAVGLSYGAHSNLCINQLVRNGNEAQKEKYLPKLISGEYIGALAMSEPNAGSDVVSMKLKAEKK--GNHYILN--- 161 (394)
T ss_dssp HHHCHHHHHHHHHHHTTTHHHHHHHCCHHHHHHHHHHHHHTSSCEEEECCBTTBSSSGGGCCCEEEEC--SSEEEEE---
T ss_pred HhhchhHHHHHHHhhHHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCcCcccceEEEEEc--CCEEEEE---
Confidence 99999999988888667888999999999999999999999999999999999999999999999998 8999999
Q ss_pred CCceeeeccCccccCcEEEEEEEEecCCCCCCCCCCCceEEEEEeecCCCCCCCCCCeEEecCCCCccCCCCCceeEEec
Q 048624 198 DGAIKWWIGNAAVHGKFATVFAKLMLPTHDSKGYSDMGVHAFIVPIRDMKTHQTLPGIEIHDCGHKVGLNGVDNGALRFC 277 (673)
Q Consensus 198 ~~G~K~~i~~~~~~A~~~vV~Ar~~~~g~~~~~~~~~g~~~FlV~~rd~~~~~~~pGv~v~~~~~~~G~~~~~~~~l~fd 277 (673)
|+|+|+||+. .|||++|+|++..++++ +++|+++|+||.+ .|||++.+.|+++|+++++++.|.||
T Consensus 162 --G~K~~vs~~~-~Ad~~~v~ar~~~~~~~----~~~g~~~flV~~~-------~pGv~v~~~~~~~G~~~~~~~~v~fd 227 (394)
T 1ivh_A 162 --GNKFWITNGP-DADVLIVYAKTDLAAVP----ASRGITAFIVEKG-------MPGFSTSKKLDKLGMRGSNTCELIFE 227 (394)
T ss_dssp --EEEEEEETGG-GCSEEEEEEESCTTCSS----GGGGEEEEEEETT-------CTTEEECCCCCBSSCTTSCEEEEEEE
T ss_pred --eEEEeeCCCC-cCCEEEEEEEeCCcccC----CCCCeEEEEEeCC-------CCCeEeccccccccCCCCCeeEEEEC
Confidence 9999999999 99999999998643111 1238999999964 69999999999999999999999999
Q ss_pred ceecCcccccccCCcccCCCccccCCcccchHHHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCcc
Q 048624 278 SVRIPRDNLLNRFGDVSRDGKYTSSLPTINKRFAATLGELVGGRVGLAYSSVGVLKIAATIAIRYSLLRQQFGPPRKPEV 357 (673)
Q Consensus 278 ~v~VP~~~lL~~~~~v~~~G~~~~~~~~~~~g~~~~~~~l~~~rl~~aa~~~G~a~~al~~a~~ya~~R~qfg~~~~~e~ 357 (673)
||+||.+++||. ++.|+...+..+..+|+.+++.++|+++++++.+++|+++|+|||+|
T Consensus 228 ~v~Vp~~~~lg~----------------~~~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~~----- 286 (394)
T 1ivh_A 228 DCKIPAANILGH----------------ENKGVYVLMSGLDLERLVLAGGPLGLMQAVLDHTIPYLHVREAFGQK----- 286 (394)
T ss_dssp EEEEEGGGEESC----------------TTCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTCEETTEE-----
T ss_pred cEEEcHHHcCCC----------------CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCCcc-----
Confidence 999999999986 45678888889999999999999999999999999999999999998
Q ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchhhhHHHHHHhHHHHHHHHHHHHHHHHHHHhCccCcc
Q 048624 358 SILDYQSQQHKLMPMLASTYAFHFATANLVEKYSEMKKTHDEQLVGDVHALSAGLKSYVTSYTAKSLSVCREACGGHGYA 437 (673)
Q Consensus 358 ~i~~~q~vq~~La~~~a~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~K~~at~~a~~~~~~~~q~~Gg~Gy~ 437 (673)
|+++|.+|++|++|.+.+++++.+ ++.+++..+.+ .+....++++|.++++.+.++++.|+|+|||.||+
T Consensus 287 -i~~~q~vq~~la~~~~~~~aar~~----~~~aa~~~~~g-----~~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~ 356 (394)
T 1ivh_A 287 -IGHFQLMQGKMADMYTRLMACRQY----VYNVAKACDEG-----HCTAKDCAGVILYSAECATQVALDGIQCFGGNGYI 356 (394)
T ss_dssp -GGGSHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHTT-----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGB
T ss_pred -hhccHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHCC-----CcchHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc
Confidence 999999999999999999996544 45555555554 23456789999999999999999999999999999
Q ss_pred CccchhccccccccccccCccHHHHHHHHHHHHHHHH
Q 048624 438 AVNRFGSLRNDHDIFQTFEGDNTVLLQQVAGDLLKQY 474 (673)
Q Consensus 438 ~~~~l~r~~rd~~~~~~~eG~~~vl~~~ia~~ll~~~ 474 (673)
.+++++++|||+++..+++|++++++..+++.+++.|
T Consensus 357 ~~~~l~r~~Rda~~~~i~~Gt~~i~~~~ia~~ll~~~ 393 (394)
T 1ivh_A 357 NDFPMGRFLRDAKLYEIGAGTSEVRRLVIGRAFNADF 393 (394)
T ss_dssp TTSTHHHHHHHHHHTTTTTSCHHHHHHHHHHHHHTC-
T ss_pred CCchHHHHHHhcccccccCChHHHHHHHHHHHHHhhc
Confidence 9999999999999999999999999999999998754
No 14
>3r7k_A Probable acyl COA dehydrogenase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: FDA; 2.50A {Mycobacterium abscessus}
Probab=100.00 E-value=4.9e-58 Score=499.98 Aligned_cols=372 Identities=19% Similarity=0.205 Sum_probs=328.6
Q ss_pred hHhhhhhcCCCHHHHHH-HHHHHhcCCCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCCccccCC------CHHHHHHHH
Q 048624 42 CAVIWLYERKAQGDTRE-SVEYFNSRPDLQTPVEILKDDHRELCWRQLLGLVREAGIKPFKYVAE------DPAQYFAIA 114 (673)
Q Consensus 42 ~~~m~~~l~~e~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~Gl~~~~~p~~------~~~~~~~~~ 114 (673)
+..+++.+++||+++++ +++|+.++. . +...+.++.+. +++++|+.+.+.||+++.+|++ ++.+.+.++
T Consensus 22 ~~~~~~~~~~e~~~l~~~~r~~~~~~~--~-~~~~~~d~~~~-~~~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~ 97 (403)
T 3r7k_A 22 VVAPEAWTTPERRALSQMARSFVEREI--A-PKLAEWEHVGE-IPRDLHLNAAEVGLLGIGFPEEVGGSGGNAIDSALVT 97 (403)
T ss_dssp ---CGGGGCHHHHHHHHHHHHHHHHHT--T-TTHHHHHHHTS-CCTHHHHHHHHHTCTTBTSCGGGTCCBCCHHHHHHHH
T ss_pred hcCCCCCCCHHHHHHHHHHHHHHHHhC--C-hhHHHHHhcCC-CCHHHHHHHHhCCCCcCCCChhhCCCCCCHHHHHHHH
Confidence 34578889999999999 777776552 2 12233444444 3489999999999999999975 899999999
Q ss_pred HHHhcc-chhhHHHHHHhHhhHHHHHhccCChhhHHhHHhhhhcCCcceeeeccCCCCCCCcCCceeEEEEcCCCCEEEE
Q 048624 115 EAVGSV-DMSLGIKMGVQYSLWGGSVINLGTKKHRDKYYDGIDNLDYPGCFAMTELHHGSNVQGLQTVATFDPIKDEFII 193 (673)
Q Consensus 115 e~la~~-~~s~~~~~~~h~~l~~~~i~~~gt~eq~~~~l~~i~~g~~~g~~a~TE~~~Gsd~~~~~TtA~~d~~~~~~vL 193 (673)
|++++. |+++++.+.+|..++...|..+|+++|+++|||++.+|+.++|+++|||++|||+.+++|+|+++ +|+|+|
T Consensus 98 eela~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~Gsd~~~~~t~A~~~--~~g~~l 175 (403)
T 3r7k_A 98 EAILAAGGSTGVCAALFTHGIALPHIAANGSDALIERYVRPTLAGKMIGSLGVTEPGAGSDVANLRTRAVRE--GDTYVV 175 (403)
T ss_dssp HHHHHTTCCHHHHHHHCTHHHHSHHHHHHCCHHHHHHHHHHHHTTSCCEEEECCBTTBSSCGGGCCCEEEEC--SSEEEE
T ss_pred HHHHhcCCchHHHHHHHHhhHHHHHHHHhCCHHHHHHHHHHHhCCCeeEEEEecCCCCCCChhhceEEEEEE--CCEEEE
Confidence 999998 88888777766667888999999999999999999999999999999999999999999999998 899999
Q ss_pred ecCCCCceeeeccCccccCcEEEEEEEEecCCCCCCCCCCCceEEEEEeecCCCCCCCCCCeEEecCCCCccCCCCCcee
Q 048624 194 NTPNDGAIKWWIGNAAVHGKFATVFAKLMLPTHDSKGYSDMGVHAFIVPIRDMKTHQTLPGIEIHDCGHKVGLNGVDNGA 273 (673)
Q Consensus 194 ntP~~~G~K~~i~~~~~~A~~~vV~Ar~~~~g~~~~~~~~~g~~~FlV~~rd~~~~~~~pGv~v~~~~~~~G~~~~~~~~ 273 (673)
| |+|+|++++. .|||++|+|++..+ +. +|+++|+||.+ .|||++.+.|+++|+++++++.
T Consensus 176 n-----G~K~~vs~a~-~Ad~~~v~a~~~~~-~~------~g~~~flV~~~-------~pGv~v~~~~~~~G~~~~~~~~ 235 (403)
T 3r7k_A 176 N-----GAKTFITSGV-RADFVTTAVRTGGP-GY------GGVSLLVIDKN-------SPGFEVSRRLDKMGWRCSDTAE 235 (403)
T ss_dssp E-----EEEEEEETTT-TCSEEEEEEECSSS-SG------GGEEEEEEETT-------CTTEEEEEECCBSSCTTSCEEE
T ss_pred E-----EEEEcccCCc-cCCEEEEEEEcCCC-CC------CceEEEEEeCC-------CCCeEecCcccccCCCCCCceE
Confidence 9 9999999999 99999999998643 22 38999999965 5999999999999999999999
Q ss_pred EEecceecCcccccccCCcccCCCccccCCcccchHHHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCC
Q 048624 274 LRFCSVRIPRDNLLNRFGDVSRDGKYTSSLPTINKRFAATLGELVGGRVGLAYSSVGVLKIAATIAIRYSLLRQQFGPPR 353 (673)
Q Consensus 274 l~fd~v~VP~~~lL~~~~~v~~~G~~~~~~~~~~~g~~~~~~~l~~~rl~~aa~~~G~a~~al~~a~~ya~~R~qfg~~~ 353 (673)
|.||||+||.+++||. ++.|+...+..+..+|+.+++.++|+++++++.+++|+++|+|||+|
T Consensus 236 v~fd~v~Vp~~~~lg~----------------~~~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~~- 298 (403)
T 3r7k_A 236 LSFVDVRVPADNLVGA----------------ENSGFLQIMQQFQAERLGIAVQAYATAGRALDLAKSWARERETFGRP- 298 (403)
T ss_dssp EEEEEEEEEGGGEESS----------------TTCHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEE-
T ss_pred EEEeeEEECHHHcCCC----------------CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccCCCc-
Confidence 9999999999999985 46788888999999999999999999999999999999999999999
Q ss_pred CCcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchhhhHHHHHHhHHHHHHHHHHHHHHHHHHHhCc
Q 048624 354 KPEVSILDYQSQQHKLMPMLASTYAFHFATANLVEKYSEMKKTHDEQLVGDVHALSAGLKSYVTSYTAKSLSVCREACGG 433 (673)
Q Consensus 354 ~~e~~i~~~q~vq~~La~~~a~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~K~~at~~a~~~~~~~~q~~Gg 433 (673)
|+++|.+|++|++|.+.+++++++ ++.+++..+.+ .+....++++|.++++.+.++++.|+|+|||
T Consensus 299 -----i~~~q~vq~~la~~~~~~~aar~~----~~~aa~~~d~~-----~~~~~~~~~aK~~a~~~a~~v~~~a~q~~Gg 364 (403)
T 3r7k_A 299 -----LTGRQIIRHKLAEMARQVDVACTY----TRAVMQRWLAG-----EDVVAEVSMAKNTAVYACDYVVNEAVQIFGG 364 (403)
T ss_dssp -----GGGSHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHTT-----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred -----hhhcHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHCC-----CCcHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 999999999999999999996544 45555555655 3345678999999999999999999999999
Q ss_pred cCccCccchhccccccccccccCccHHHHHHHHHHHH
Q 048624 434 HGYAAVNRFGSLRNDHDIFQTFEGDNTVLLQQVAGDL 470 (673)
Q Consensus 434 ~Gy~~~~~l~r~~rd~~~~~~~eG~~~vl~~~ia~~l 470 (673)
+||+++++++|+|||+++..+++|++++++..+++.+
T Consensus 365 ~G~~~~~~~~r~~Rda~~~~i~~Gt~ei~~~~ia~~l 401 (403)
T 3r7k_A 365 MGYMRESEIERHYRDCRILGIGGGTNEIMNEVIAKRI 401 (403)
T ss_dssp GGGBTTSHHHHHHHHHTTTTTTTSCHHHHHHHHHHHH
T ss_pred eEecCCchHHHHHHHhCcceeecCHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999875
No 15
>3nf4_A Acyl-COA dehydrogenase; seattle structural genomics center for infectious disease, S FAD, FADH, tuberculosis, oxidoredu; HET: FAD; 2.35A {Mycobacterium thermoresistibile}
Probab=100.00 E-value=4.4e-58 Score=498.07 Aligned_cols=369 Identities=21% Similarity=0.307 Sum_probs=320.4
Q ss_pred hhhhcCCCHHHHHH-HHHHHhcCCCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCCccccCC------CHHHHHHHHHHH
Q 048624 45 IWLYERKAQGDTRE-SVEYFNSRPDLQTPVEILKDDHRELCWRQLLGLVREAGIKPFKYVAE------DPAQYFAIAEAV 117 (673)
Q Consensus 45 m~~~l~~e~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~Gl~~~~~p~~------~~~~~~~~~e~l 117 (673)
|++.++++++++++ +++++.++. . +...+.++.+. +++++|+.+.+.||+++.+|++ ++.++..++|++
T Consensus 12 ~~~~~~~~~~~l~~~~r~~~~~~~--~-~~~~~~d~~~~-~~~~~~~~l~~~G~~~~~~P~~~GG~g~~~~~~~~v~eel 87 (387)
T 3nf4_A 12 DRLLPSQEAAELIELTREIADKVL--D-PIVDRHEKDET-YPEGVFEQLGAAGLLSLPQPEEWGGGGQPYEVYLQVLEEI 87 (387)
T ss_dssp CCCCSSHHHHHHHHHHHHHHHHHT--T-TTHHHHHHHTC-CCTTHHHHHHTTTTTSTTSCGGGTCCCCCHHHHHHHHHHH
T ss_pred ccccCCHHHHHHHHHHHHHHHHhC--C-ccHHHHhhhCC-CCHHHHHHHHHCCCCCCCCCHhhCCCCCCHHHHHHHHHHH
Confidence 47778999999998 777776552 2 12223444444 4589999999999999999965 899999999999
Q ss_pred hccchhhHHHHHHhHhhHHHHHhccCChhhHHhHHhhhhcCCcceeeeccCCCCCCCcCCceeEEEEcCCCCEEEEecCC
Q 048624 118 GSVDMSLGIKMGVQYSLWGGSVINLGTKKHRDKYYDGIDNLDYPGCFAMTELHHGSNVQGLQTVATFDPIKDEFIINTPN 197 (673)
Q Consensus 118 a~~~~s~~~~~~~h~~l~~~~i~~~gt~eq~~~~l~~i~~g~~~g~~a~TE~~~Gsd~~~~~TtA~~d~~~~~~vLntP~ 197 (673)
++.|+++++.+.+|. ++...|..+|+++|+++|||++.+|+.++|+++|||++|||+.+++|+|+++ +|+|+||
T Consensus 88 ~~~~~~~~~~~~~~~-~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~gsd~~~~~t~A~~~--~~g~~ln--- 161 (387)
T 3nf4_A 88 AARWASVAVAVSVHS-LSSHPLLVFGTEEQKKRWLPGMLSGEQIGAYSLSEPQAGSDAAALRCAATPT--DGGYVIN--- 161 (387)
T ss_dssp HTTCHHHHHHHHHHH-HHTHHHHHHSCHHHHHHHHHHHTTSSCCEEEECCBTTBSSCGGGCCCEEEEE--TTEEEEE---
T ss_pred HHhCchHHHHHHHHH-HHHHHHHHhCCHHHHHHHHHHHhCCCeeEEEEEcCCCCCCChhhCEEEEEEe--CCEEEEE---
Confidence 999999998888775 6778899999999999999999999999999999999999999999999998 8999999
Q ss_pred CCceeeeccCccccCcEEEEEEEEecCCCCCCCCCCCceEEEEEeecCCCCCCCCCCeEEecCCCCccCCCCCceeEEec
Q 048624 198 DGAIKWWIGNAAVHGKFATVFAKLMLPTHDSKGYSDMGVHAFIVPIRDMKTHQTLPGIEIHDCGHKVGLNGVDNGALRFC 277 (673)
Q Consensus 198 ~~G~K~~i~~~~~~A~~~vV~Ar~~~~g~~~~~~~~~g~~~FlV~~rd~~~~~~~pGv~v~~~~~~~G~~~~~~~~l~fd 277 (673)
|+|+|+||+. .||+++|+|++. + +.. |+++|+||.+ .|||++.+.|+++|+++++++.|.||
T Consensus 162 --G~K~~~s~~~-~Ad~~~v~a~~~-~-~~~------g~~~flV~~~-------~pGv~~~~~~~~~G~~~~~~~~v~fd 223 (387)
T 3nf4_A 162 --GSKSWITHGG-KADFYTLFARTG-E-GSR------GVSCFLVPAD-------QPGLSFGKPEEKMGLHAVPTTSAFYD 223 (387)
T ss_dssp --EEEEEEETTT-TCSEEEEEEECC----CC------CEEEEEEETT-------CTTEEECCCCCBSSCCSSCEEEEEEE
T ss_pred --eEEecccCCc-ccCEEEEEEEeC-C-CCC------ceEEEEEECC-------CCCeEecCcccccccCCCCeeEEEEe
Confidence 9999999999 999999999986 2 222 8999999965 59999999999999999999999999
Q ss_pred ceecCcccccccCCcccCCCccccCCcccchHHHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCcc
Q 048624 278 SVRIPRDNLLNRFGDVSRDGKYTSSLPTINKRFAATLGELVGGRVGLAYSSVGVLKIAATIAIRYSLLRQQFGPPRKPEV 357 (673)
Q Consensus 278 ~v~VP~~~lL~~~~~v~~~G~~~~~~~~~~~g~~~~~~~l~~~rl~~aa~~~G~a~~al~~a~~ya~~R~qfg~~~~~e~ 357 (673)
||+||.+++||. ++.|+...+..+..+|+.+++.++|+++++++.+++|+++|+|||+|
T Consensus 224 ~v~Vp~~~~lg~----------------~~~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~~a~~R~~fg~~----- 282 (387)
T 3nf4_A 224 NARIDADRRIGE----------------EGQGLQIAFSALDSGRLGIAAVATGLAQAALDEAVAYANERTAFGRK----- 282 (387)
T ss_dssp EEEEEGGGEESS----------------TTCHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHC------C-----
T ss_pred eEEecHHHcCCC----------------CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCCCc-----
Confidence 999999999985 46788888899999999999999999999999999999999999999
Q ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchhhhHHHHHHhHHHHHHHHHHHHHHHHHHHhCccCcc
Q 048624 358 SILDYQSQQHKLMPMLASTYAFHFATANLVEKYSEMKKTHDEQLVGDVHALSAGLKSYVTSYTAKSLSVCREACGGHGYA 437 (673)
Q Consensus 358 ~i~~~q~vq~~La~~~a~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~K~~at~~a~~~~~~~~q~~Gg~Gy~ 437 (673)
|+++|.+|++|+++.+.+++++. +++.+++..+.+ .+....++++|.++++.+.++++.|+|+|||+||+
T Consensus 283 -i~~~q~v~~~la~~~~~~~aar~----~~~~aa~~~~~~-----~~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~G~~ 352 (387)
T 3nf4_A 283 -IIDHQGLGFLLADMAAAVATARA----TYLDAARRRDQG-----RPYSQQASIAKLTATDAAMKVTTDAVQVFGGVGYT 352 (387)
T ss_dssp -TTTC-CHHHHHHHHHHHHHHHHH----HHHHHHHHHHTT-----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGB
T ss_pred -hhhhHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHCC-----CCchHHHHHHHHHHHHHHHHHHHHHHHhhCcHhhc
Confidence 99999999999999999999554 445555666655 34456789999999999999999999999999999
Q ss_pred CccchhccccccccccccCccHHHHHHHHHHHHHH
Q 048624 438 AVNRFGSLRNDHDIFQTFEGDNTVLLQQVAGDLLK 472 (673)
Q Consensus 438 ~~~~l~r~~rd~~~~~~~eG~~~vl~~~ia~~ll~ 472 (673)
++++++++|||+++..+++|++++++..+++.+++
T Consensus 353 ~~~~~~r~~Rda~~~~i~~Gt~ei~~~~ia~~l~~ 387 (387)
T 3nf4_A 353 RDYRVERYMREAKIMQIFEGTNQIQRLVIARGLTR 387 (387)
T ss_dssp TTSSHHHHHHHHHHHTTSSSCHHHHHHHHHHTTC-
T ss_pred CCCcHHHHHhHhhcCeeecChHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999998764
No 16
>3ii9_A Glutaryl-COA dehydrogenase; slipchip, microfluidics, screening, optimization, protein crystallization, structural genomics; HET: PGE PG4; 1.74A {Burkholderia pseudomallei 1710B} PDB: 3eon_A* 3eom_A* 3gqt_A* 3gnc_A* 3d6b_A
Probab=100.00 E-value=1.3e-58 Score=503.67 Aligned_cols=373 Identities=22% Similarity=0.268 Sum_probs=322.6
Q ss_pred hHhhhhhcCCCHHHHHH-HHHHHhcCCCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCCccccCC------CHHHHHHHH
Q 048624 42 CAVIWLYERKAQGDTRE-SVEYFNSRPDLQTPVEILKDDHRELCWRQLLGLVREAGIKPFKYVAE------DPAQYFAIA 114 (673)
Q Consensus 42 ~~~m~~~l~~e~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~Gl~~~~~p~~------~~~~~~~~~ 114 (673)
+..|+|.+++||+++++ +++++.++ + . +...+.++... +++++|+.+.+.||+++.+|++ ++.+...++
T Consensus 12 ~~~m~~~~~~e~~~l~~~~r~~~~~~-~-~-~~~~~~~~~~~-~~~~~~~~l~~~Gl~~l~~P~~~GG~g~~~~~~~~v~ 87 (396)
T 3ii9_A 12 PLLLDQQLADDERMVRDAAHAYAQGK-L-A-PRVTEAFRHET-TDAAIFREMGEIGLLGPTIPEQYGGPGLDYVSYGLIA 87 (396)
T ss_dssp TTCGGGGSCHHHHHHHHHHHHHCCCC-C-H-HHHHHHHHHTC-CCTHHHHHHHHTTCSSTTSCGGGTSCCCCHHHHHHHH
T ss_pred ccccCCCCCHHHHHHHHHHHHHHHHh-C-C-hhHHHHHhhCC-CCHHHHHHHHhCCCCCCCCChhhCCCCCCHHHHHHHH
Confidence 44799999999999999 55555443 2 2 22233344334 4589999999999999999975 899999999
Q ss_pred HHHhccchhhHHHHHHhHhhHHHHHhccCChhhHHhHHhhhhcCCcceeeeccCCCCCCCcCCceeEEEEcCCCCEEEEe
Q 048624 115 EAVGSVDMSLGIKMGVQYSLWGGSVINLGTKKHRDKYYDGIDNLDYPGCFAMTELHHGSNVQGLQTVATFDPIKDEFIIN 194 (673)
Q Consensus 115 e~la~~~~s~~~~~~~h~~l~~~~i~~~gt~eq~~~~l~~i~~g~~~g~~a~TE~~~Gsd~~~~~TtA~~d~~~~~~vLn 194 (673)
|++++.|+++++.+.+|..++...|..+|+++|+++|||++.+|+.++|+++|||++|||+.+++|+|+++ +|+|+||
T Consensus 88 eel~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~Gsd~~~~~t~A~~~--~~g~~ln 165 (396)
T 3ii9_A 88 REVERVDSGYRSMMSVQSSLVMVPIFEFGSDAQKEKYLPKLATGEWIGCFGLTEPNHGSDPGSMVTRARKV--PGGYSLS 165 (396)
T ss_dssp HHHHTTCHHHHHHHHCCCCCCCHHHHHHSCHHHHHHHHHHHHHTSSCEEEECCCCC------CCCCEEEEE--TTEEEEE
T ss_pred HHHHHhChhHHHHHHhhhhhHHHHHHHhCCHHHHHHHHHHHhCCCeeeEEEecCCCCCCChhhCeeEEEEe--CCEEEEE
Confidence 99999999998888887666677899999999999999999999999999999999999999999999998 8999999
Q ss_pred cCCCCceeeeccCccccCcEEEEEEEEecCCCCCCCCCCCceEEEEEeecCCCCCCCCCCeEEecCCCCccCCCCCceeE
Q 048624 195 TPNDGAIKWWIGNAAVHGKFATVFAKLMLPTHDSKGYSDMGVHAFIVPIRDMKTHQTLPGIEIHDCGHKVGLNGVDNGAL 274 (673)
Q Consensus 195 tP~~~G~K~~i~~~~~~A~~~vV~Ar~~~~g~~~~~~~~~g~~~FlV~~rd~~~~~~~pGv~v~~~~~~~G~~~~~~~~l 274 (673)
|+|.|+|++. .||+++|+|++..++ .. |+++|+||.+ .|||++.+.|+++|+++++++.|
T Consensus 166 -----G~K~~vs~a~-~Ad~~~v~a~~~~~g-~~------g~~~flV~~~-------~pGv~v~~~~~~~G~~~~~~~~v 225 (396)
T 3ii9_A 166 -----GSKMWITNSP-IADVFVVWAKLDEDG-RD------EIRGFILEKG-------CKGLSAPAIHGKVGLRASITGEI 225 (396)
T ss_dssp -----EEEEEEETGG-GCSEEEEEEEEEETT-EE------EEEEEEEETT-------CTTEECCBCCCCSSCTTSCEEEE
T ss_pred -----EEEEeECCCc-cCCEEEEEEEecCCC-CC------ceEEEEEecC-------CCCeEeccccccccCCcCCeeEE
Confidence 9999999999 999999999997322 22 7999999965 59999999999999999999999
Q ss_pred EecceecCcccccccCCcccCCCccccCCcccchHHHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCC
Q 048624 275 RFCSVRIPRDNLLNRFGDVSRDGKYTSSLPTINKRFAATLGELVGGRVGLAYSSVGVLKIAATIAIRYSLLRQQFGPPRK 354 (673)
Q Consensus 275 ~fd~v~VP~~~lL~~~~~v~~~G~~~~~~~~~~~g~~~~~~~l~~~rl~~aa~~~G~a~~al~~a~~ya~~R~qfg~~~~ 354 (673)
.||||+||.+++|+. +.|+...+..+..+|+.+++.++|+++++++.+++|+++|+|||+|
T Consensus 226 ~fddv~Vp~~~~l~~-----------------~~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~~-- 286 (396)
T 3ii9_A 226 VLDEAFVPEENILPH-----------------VKGLRGPFTCLNSARYGIAWGALGAAESCWHIARQYVLDRKQFGRP-- 286 (396)
T ss_dssp EEEEEEEEGGGBCTT-----------------CCSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEE--
T ss_pred EEccEEECHHHccCC-----------------ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCeeCCCc--
Confidence 999999999999964 2346677888999999999999999999999999999999999999
Q ss_pred CcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchhhhHHHHHHhHHHHHHHHHHHHHHHHHHHhCcc
Q 048624 355 PEVSILDYQSQQHKLMPMLASTYAFHFATANLVEKYSEMKKTHDEQLVGDVHALSAGLKSYVTSYTAKSLSVCREACGGH 434 (673)
Q Consensus 355 ~e~~i~~~q~vq~~La~~~a~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~K~~at~~a~~~~~~~~q~~Gg~ 434 (673)
|+++|.+|++|++|.+.+++++++ ++.+++..+.+ .+....++++|.++++.+.++++.|+|+|||+
T Consensus 287 ----i~~~q~vq~~la~~~~~~~aar~~----~~~aa~~~d~~-----~~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~ 353 (396)
T 3ii9_A 287 ----LAANQLIQKKLADMQTEITLGLQG----VLRLGRMKDEG-----TAAVEITSIMKRNSCGKALDIARLARDMLGGN 353 (396)
T ss_dssp ----GGGSHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHT-----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCSC
T ss_pred ----hhhhHHHHHHHHHHHHHHHHHHHH----HHHHHHHHhCC-----CCchHHHHHHHHHHHHHHHHHHHHHHHhhCcc
Confidence 999999999999999999996544 45555555554 33456789999999999999999999999999
Q ss_pred CccCccchhccccccccccccCccHHHHHHHHHHHHHH
Q 048624 435 GYAAVNRFGSLRNDHDIFQTFEGDNTVLLQQVAGDLLK 472 (673)
Q Consensus 435 Gy~~~~~l~r~~rd~~~~~~~eG~~~vl~~~ia~~ll~ 472 (673)
||+.+++++|+|||+++..+++|++++++..+++.+++
T Consensus 354 g~~~~~~~~r~~Rda~~~~i~~Gt~~~~~~~ia~~llg 391 (396)
T 3ii9_A 354 GISDEFGVARHLVNLEVVNTYEGTHDIHALILGRAQTG 391 (396)
T ss_dssp SCSGGGHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHHS
T ss_pred cccCCCcHHHHHhhhcCceeecCHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999984
No 17
>2pg0_A Acyl-COA dehydrogenase; GK1316, geobacillus kaustophilus HTA structural genomics, PSI, protein structure initiative; HET: FAD; 1.80A {Geobacillus kaustophilus}
Probab=100.00 E-value=1.3e-57 Score=493.85 Aligned_cols=371 Identities=20% Similarity=0.236 Sum_probs=323.7
Q ss_pred hhh-hhcCCCHHHHHH-HHHHHhcCCCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCCccccCC------CHHHHHHHHH
Q 048624 44 VIW-LYERKAQGDTRE-SVEYFNSRPDLQTPVEILKDDHRELCWRQLLGLVREAGIKPFKYVAE------DPAQYFAIAE 115 (673)
Q Consensus 44 ~m~-~~l~~e~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~Gl~~~~~p~~------~~~~~~~~~e 115 (673)
.|+ |.+++|++++++ +++++.++. . +...+.++.+. +++++|+.+.+.||+++.+|++ ++.+.+.+.|
T Consensus 4 ~m~~~~~~~~~~~l~~~~~~~~~~~~--~-~~~~~~d~~~~-~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~e 79 (385)
T 2pg0_A 4 HMTARYLREEHHMFRAAFRKFLEKEA--Y-PHYNDWEKRGI-IPRSFWAKMGENGFLCPWVDEKYGGLNADFAYSVVINE 79 (385)
T ss_dssp --CCTTCCHHHHHHHHHHHHHHHHHT--T-TTHHHHHHHTS-CCHHHHHHHHHTTCSSTTSCGGGTCCCCCHHHHHHHHH
T ss_pred ccCCCCCCHHHHHHHHHHHHHHHHhC--c-hhHHHHHhcCC-CCHHHHHHHHHCCCCCcCCChhhCCCCCCHHHHHHHHH
Confidence 487 889999999988 777776652 2 12223344444 3488999999999999999965 8899999999
Q ss_pred HHhccc-hhhHHHHHHhHhhHHHHHhccCChhhHHhHHhhhhcCCcceeeeccCCCCCCCcCCceeEEEEcCCCCEEEEe
Q 048624 116 AVGSVD-MSLGIKMGVQYSLWGGSVINLGTKKHRDKYYDGIDNLDYPGCFAMTELHHGSNVQGLQTVATFDPIKDEFIIN 194 (673)
Q Consensus 116 ~la~~~-~s~~~~~~~h~~l~~~~i~~~gt~eq~~~~l~~i~~g~~~g~~a~TE~~~Gsd~~~~~TtA~~d~~~~~~vLn 194 (673)
++++.| +++++.+ |..++...|..+|+++|+++|||++.+|+.++|+++|||++|||+.+++|+|+++ +|+|+||
T Consensus 80 ela~~~~~~~~~~~--~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~--~~g~~ln 155 (385)
T 2pg0_A 80 ELEKVGSSLVGIGL--HNDIVTPYIASYGTEEQKQKWLPKCVTGELITAIAMTEPGAGSDLANISTTAVKD--GDYYIVN 155 (385)
T ss_dssp HHHHHCGGGHHHHH--HHHTTHHHHHHHCCHHHHHHHHHHHHHTSSCEEEECCBTTBSSCGGGCCCEEEEE--TTEEEEE
T ss_pred HHHhhCCchHHHHH--HhhHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEeCCCCCCcCHhhCeEEEEEc--CCEEEEE
Confidence 999999 8887654 6567788899999999999999999999999999999999999999999999998 8999999
Q ss_pred cCCCCceeeeccCccccCcEEEEEEEEecCCCCCCCCCCCceEEEEEeecCCCCCCCCCCeEEecCCCCccCCCCCceeE
Q 048624 195 TPNDGAIKWWIGNAAVHGKFATVFAKLMLPTHDSKGYSDMGVHAFIVPIRDMKTHQTLPGIEIHDCGHKVGLNGVDNGAL 274 (673)
Q Consensus 195 tP~~~G~K~~i~~~~~~A~~~vV~Ar~~~~g~~~~~~~~~g~~~FlV~~rd~~~~~~~pGv~v~~~~~~~G~~~~~~~~l 274 (673)
|+|+|+||+. .|||++|+|++..+..+ +++|+++|+||.+ .|||++.+.|+++|+++++++.|
T Consensus 156 -----G~K~~~s~~~-~Ad~~~v~a~~~~~~~~----~~~g~~~flV~~~-------~pGv~v~~~~~~~g~~~~~~~~v 218 (385)
T 2pg0_A 156 -----GQKTFITNGI-HADLIVVACKTDPQAKP----PHRGISLLVVERD-------TPGFTRGRKLEKVGLHAQDTAEL 218 (385)
T ss_dssp -----EEEEEETTTT-TCSEEEEEEESCTTCSS----GGGGEEEEEEETT-------CTTEEECCCCCBSSCTTSCCEEE
T ss_pred -----eEEecccCCc-ccCEEEEEEEeCCccCC----CCCceEEEEEeCC-------CCCeEecCCccccccCCCceEEE
Confidence 9999999999 99999999998633100 1238999999964 69999999999999999999999
Q ss_pred EecceecCcccccccCCcccCCCccccCCcccchHHHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCC
Q 048624 275 RFCSVRIPRDNLLNRFGDVSRDGKYTSSLPTINKRFAATLGELVGGRVGLAYSSVGVLKIAATIAIRYSLLRQQFGPPRK 354 (673)
Q Consensus 275 ~fd~v~VP~~~lL~~~~~v~~~G~~~~~~~~~~~g~~~~~~~l~~~rl~~aa~~~G~a~~al~~a~~ya~~R~qfg~~~~ 354 (673)
.||||+||.+++||. +++|+...+..+..+|+.+++.++|+++++++.+++|+++|+|||+|
T Consensus 219 ~fd~v~Vp~~~~lg~----------------~g~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~~-- 280 (385)
T 2pg0_A 219 FFQDAKVPAYNLLGE----------------EGKGFYYLMEKLQQERLVVAIAAQTAAEVMFSLTKQYVKQRTAFGKR-- 280 (385)
T ss_dssp EEEEEEEEGGGEESC----------------TTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEE--
T ss_pred EEcceEEcHHHcCCC----------------CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCCc--
Confidence 999999999999985 45688888888999999999999999999999999999999999999
Q ss_pred CcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchhhhHHHHHHhHHHHHHHHHHHHHHHHHHHhCcc
Q 048624 355 PEVSILDYQSQQHKLMPMLASTYAFHFATANLVEKYSEMKKTHDEQLVGDVHALSAGLKSYVTSYTAKSLSVCREACGGH 434 (673)
Q Consensus 355 ~e~~i~~~q~vq~~La~~~a~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~K~~at~~a~~~~~~~~q~~Gg~ 434 (673)
|+++|.+|++|++|.+.+++++++ ++.+++..+.+ .+....++++|.++++.+.++++.|+|+|||.
T Consensus 281 ----i~~~q~v~~~la~~~~~~~aar~~----~~~aa~~~d~g-----~~~~~~~~~aK~~a~e~a~~~~~~a~q~~Gg~ 347 (385)
T 2pg0_A 281 ----VSEFQTVQFRLAEMATEIALGRTF----VDRVIEEHMAG-----KQIVTEVSMAKWWITEMAKRVAAEAMQLHGGY 347 (385)
T ss_dssp ----GGGSHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHTT-----CCCHHHHHHHHHHHHHHHHHHHHHHHHHTGGG
T ss_pred ----cchhHHHHHHHHHHHHHHHHHHHH----HHHHHHHHhCC-----CCchHHHHHHHHHHHHHHHHHHHHHHHHhCcc
Confidence 999999999999999999996544 45555555654 34467789999999999999999999999999
Q ss_pred CccCccchhccccccccccccCccHHHHHHHHHHHH
Q 048624 435 GYAAVNRFGSLRNDHDIFQTFEGDNTVLLQQVAGDL 470 (673)
Q Consensus 435 Gy~~~~~l~r~~rd~~~~~~~eG~~~vl~~~ia~~l 470 (673)
||+.+++++++|||++...+++|++++++..+++.+
T Consensus 348 g~~~~~~~~r~~Rda~~~~i~~Gt~~i~~~~ia~~l 383 (385)
T 2pg0_A 348 GYMEEYEIARRYRDIPVSAIYAGTNEMMKTIIARQL 383 (385)
T ss_dssp GGBTTSHHHHHHHHGGGGGTTTSCHHHHHHHHHHHT
T ss_pred ccCCCCcHHHHHhhhcCceeecCHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999864
No 18
>2dvl_A Acyl-COA dehydrogenase; structural genomics, NPPSFA, national project on protein STR and functional analyses; HET: FAD; 2.50A {Thermus thermophilus}
Probab=100.00 E-value=8.3e-58 Score=493.19 Aligned_cols=365 Identities=23% Similarity=0.317 Sum_probs=322.4
Q ss_pred hhcCCCHHHHHH-HHHHHhcCCCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCCccccCC------CHHHHHHHHHHHhc
Q 048624 47 LYERKAQGDTRE-SVEYFNSRPDLQTPVEILKDDHRELCWRQLLGLVREAGIKPFKYVAE------DPAQYFAIAEAVGS 119 (673)
Q Consensus 47 ~~l~~e~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~Gl~~~~~p~~------~~~~~~~~~e~la~ 119 (673)
|.+++|++++++ +++++.+. + . +...+.++.+. +++++|+.+.+.||+++.+|++ ++.+...+.|++++
T Consensus 1 ~~~~~e~~~l~~~~r~~~~~~-~-~-~~~~~~d~~~~-~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eel~~ 76 (372)
T 2dvl_A 1 MTLTQEQRLVLDAVRRVAREV-L-Y-PLAPEYDRKAE-YPWPQLKALAELGLLGMTTPEEWGGVGLDSVTWALALEELAA 76 (372)
T ss_dssp --CCHHHHHHHHHHHHHHHHT-H-H-HHHHHHHHTTC-CCHHHHHHHHHTTGGGTTSCGGGTSCCCCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHh-C-c-hhHHHHHhhCC-CCHHHHHHHHhCCCCCCCCChhhCCCCCCHHHHHHHHHHHHh
Confidence 457889988888 77776654 2 1 12222333333 3488999999999999999965 78999999999999
Q ss_pred cchhhHHHHHHhHhhHHHHHhccCChhhHHhHHhhhhcCCcceeeeccCCCCCCCcCCceeEEEEcCCCCEEEEecCCCC
Q 048624 120 VDMSLGIKMGVQYSLWGGSVINLGTKKHRDKYYDGIDNLDYPGCFAMTELHHGSNVQGLQTVATFDPIKDEFIINTPNDG 199 (673)
Q Consensus 120 ~~~s~~~~~~~h~~l~~~~i~~~gt~eq~~~~l~~i~~g~~~g~~a~TE~~~Gsd~~~~~TtA~~d~~~~~~vLntP~~~ 199 (673)
.|+++++.+.+|..++...|..+|+++|+++|||++.+|+.++|+++|||++|||+.+++|+|+++ +|+|+||
T Consensus 77 ~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~--~~g~~ln----- 149 (372)
T 2dvl_A 77 ADPSVAVIVSVTSGLPQYMLLRFGSEAQKRRYLVPLARGEWIGAFCLTEPQAGSDAKSLRAEARRV--KGGFVLN----- 149 (372)
T ss_dssp HCHHHHHHHHHHTSHHHHHHHHHCCHHHHHHTHHHHHTTSSCEEEECCCSSCSSCGGGCCCEEEEE--TTEEEEE-----
T ss_pred cCcHHHHHHHHhhhHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCCChhhCeeEEEEE--CCEEEEE-----
Confidence 999998888887556788899999999999999999999999999999999999999999999998 8999999
Q ss_pred ceeeeccCccccCcEEEEEEEEecCCCCCCCCCCCceEEEEEeecCCCCCCCCCCeEEecCCCCccCCCCCceeEEecce
Q 048624 200 AIKWWIGNAAVHGKFATVFAKLMLPTHDSKGYSDMGVHAFIVPIRDMKTHQTLPGIEIHDCGHKVGLNGVDNGALRFCSV 279 (673)
Q Consensus 200 G~K~~i~~~~~~A~~~vV~Ar~~~~g~~~~~~~~~g~~~FlV~~rd~~~~~~~pGv~v~~~~~~~G~~~~~~~~l~fd~v 279 (673)
|+|+|+||+. .|||++|+|+++. |+++|+||.+ .|||++.+.|+++|+++++++.|.||||
T Consensus 150 G~K~~~s~~~-~Ad~~~v~a~~~~-----------g~~~flV~~~-------~pGv~v~~~~~~~G~~~~~~~~v~fd~v 210 (372)
T 2dvl_A 150 GVKSWITSAG-HAHLYVVMARTEK-----------GISAFLVEKG-------TPGLSFGRPEEKMGLHAAHTAEVRLEEV 210 (372)
T ss_dssp EEEEEEETTT-TCSEEEEEEEETT-----------EEEEEEEETT-------CTTEEECCCCCCSSCTTSCEEEEEEEEE
T ss_pred eEEEeecCCC-cCCEEEEEEEeCC-----------CcEEEEEeCC-------CCCeEecCcccccccCcCCeeEEEECcE
Confidence 9999999999 9999999999741 6899999964 6999999999999999999999999999
Q ss_pred ecCcccccccCCcccCCCccccCCcccchHHHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCcccc
Q 048624 280 RIPRDNLLNRFGDVSRDGKYTSSLPTINKRFAATLGELVGGRVGLAYSSVGVLKIAATIAIRYSLLRQQFGPPRKPEVSI 359 (673)
Q Consensus 280 ~VP~~~lL~~~~~v~~~G~~~~~~~~~~~g~~~~~~~l~~~rl~~aa~~~G~a~~al~~a~~ya~~R~qfg~~~~~e~~i 359 (673)
+||.+++||. ++.|+...+..+..+|+.+++.++|+++++++.+++|+++|+|||+| |
T Consensus 211 ~Vp~~~~lg~----------------~~~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~~------i 268 (372)
T 2dvl_A 211 FVPEENLLGE----------------EGRGLAYALAGLDSGRVGVAAQAVGIARGAFEIAKAYAEEREQFGKK------L 268 (372)
T ss_dssp EEEGGGEESS----------------TTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEE------G
T ss_pred EeCHHHcCCC----------------CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcccCCc------h
Confidence 9999999985 45678888889999999999999999999999999999999999999 9
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchhhhHHHHHHhHHHHHHHHHHHHHHHHHHHhCccCccCc
Q 048624 360 LDYQSQQHKLMPMLASTYAFHFATANLVEKYSEMKKTHDEQLVGDVHALSAGLKSYVTSYTAKSLSVCREACGGHGYAAV 439 (673)
Q Consensus 360 ~~~q~vq~~La~~~a~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~K~~at~~a~~~~~~~~q~~Gg~Gy~~~ 439 (673)
+++|.+|++|++|.+.+++++++ ++.+++..+.+ .+....++++|.++++.+.++++.|+|+|||.||+.+
T Consensus 269 ~~~q~vq~~la~~~~~~~aar~~----~~~aa~~~~~g-----~~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~~ 339 (372)
T 2dvl_A 269 KEHQAIAFKIADMHVKIAAARAL----VLEAARKKDRG-----ERFTLEASAAKLFASAAAVEVTREAVQVLGGYGYHRD 339 (372)
T ss_dssp GGSHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHTT-----CCCHHHHHHHHHHHHHHHHHHHHHHHHHTGGGGGSGG
T ss_pred hhhHHHHHHHHHHHHHHHHHHHH----HHHHHHHHhCC-----CchHHHHHHHHHHHHHHHHHHHHHHHHhhcCeecCCC
Confidence 99999999999999999996544 45555555554 3345678999999999999999999999999999999
Q ss_pred cchhccccccccccccCccHHHHHHHHHHHHHH
Q 048624 440 NRFGSLRNDHDIFQTFEGDNTVLLQQVAGDLLK 472 (673)
Q Consensus 440 ~~l~r~~rd~~~~~~~eG~~~vl~~~ia~~ll~ 472 (673)
++++++|||++...+++|++++++..+++.+++
T Consensus 340 ~~~~r~~Rda~~~~i~~Gt~~i~~~~ia~~~l~ 372 (372)
T 2dvl_A 340 YRVERYYRDAKVTEIYEGTSEIQRLVIARELYR 372 (372)
T ss_dssp GSHHHHHHHHHGGGTTTSCHHHHHHHHHHHHHC
T ss_pred CcHHHHHHHhhcceecCCHHHHHHHHHHHHhhC
Confidence 999999999999999999999999999998863
No 19
>1rx0_A Acyl-COA dehydrogenase family member 8, mitochondrial; flavoprotein, coenzyme A, oxidoreductase; HET: FAD 2MC; 1.77A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=2.2e-57 Score=493.26 Aligned_cols=372 Identities=20% Similarity=0.242 Sum_probs=328.0
Q ss_pred hhhhhcCCCHHHHHH-HHHHHhcCCCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCCccccCC------CHHHHHHHHHH
Q 048624 44 VIWLYERKAQGDTRE-SVEYFNSRPDLQTPVEILKDDHRELCWRQLLGLVREAGIKPFKYVAE------DPAQYFAIAEA 116 (673)
Q Consensus 44 ~m~~~l~~e~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~Gl~~~~~p~~------~~~~~~~~~e~ 116 (673)
.|+|.+++||+++++ +++|+.++. . +.....++... +++++|+.+.+.||+++.+|++ ++.+...++|+
T Consensus 14 ~~~~~~~~e~~~~~~~~r~~~~~~~--~-~~~~~~d~~~~-~p~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~ee 89 (393)
T 1rx0_A 14 DPSMGLNEEQKEFQKVAFDFAAREM--A-PNMAEWDQKEL-FPVDVMRKAAQLGFGGVYIQTDVGGSGLSRLDTSVIFEA 89 (393)
T ss_dssp CTTTTCCHHHHHHHHHHHHHHHHHT--H-HHHHHHHHHTC-CCHHHHHHHHHTTCSSTTSCGGGTCCCCCHHHHHHHHHH
T ss_pred cCCCCCCHHHHHHHHHHHHHHHHhC--C-ccHHHHhhcCC-CCHHHHHHHHhCCCCcCCCChhhCCCCCCHHHHHHHHHH
Confidence 467888999999999 777776652 1 12223333333 3488999999999999999965 78999999999
Q ss_pred HhccchhhHHHHHHhHhhHHHHHhccCChhhHHhHHhhhhcCCcceeeeccCCCCCCCcCCceeEEEEcCCCCEEEEecC
Q 048624 117 VGSVDMSLGIKMGVQYSLWGGSVINLGTKKHRDKYYDGIDNLDYPGCFAMTELHHGSNVQGLQTVATFDPIKDEFIINTP 196 (673)
Q Consensus 117 la~~~~s~~~~~~~h~~l~~~~i~~~gt~eq~~~~l~~i~~g~~~g~~a~TE~~~Gsd~~~~~TtA~~d~~~~~~vLntP 196 (673)
+++.|+++++.+.+|. ++...|..+|+++||++|||++.+|+.++|+++|||++|||+.+++|+|+++ +|+|+||
T Consensus 90 la~~~~~~~~~~~~~~-~~~~~l~~~g~~~qk~~~l~~~~~G~~~~~~a~tEp~~gsd~~~~~t~A~~~--~~g~~ln-- 164 (393)
T 1rx0_A 90 LATGCTSTTAYISIHN-MCAWMIDSFGNEEQRHKFCPPLCTMEKFASYCLTEPGSGSDAASLLTSAKKQ--GDHYILN-- 164 (393)
T ss_dssp HHTTCHHHHHHHHHHH-HHHHHHHHHSCHHHHHHHHHHHHTTSSCEEEECCBTTBSSSGGGCCCEEEEE--TTEEEEE--
T ss_pred HHHhCcchhHHHHHhH-HHHHHHHHHCCHHHHHHHHHHHhCCCceEEEEecCCCCCcCcccceeEEEEc--CCEEEEE--
Confidence 9999999888877774 6778899999999999999999999999999999999999999999999998 8999999
Q ss_pred CCCceeeeccCccccCcEEEEEEEEecCCCCCCCCCCCceEEEEEeecCCCCCCCCCCeEEecCCCCccCCCCCceeEEe
Q 048624 197 NDGAIKWWIGNAAVHGKFATVFAKLMLPTHDSKGYSDMGVHAFIVPIRDMKTHQTLPGIEIHDCGHKVGLNGVDNGALRF 276 (673)
Q Consensus 197 ~~~G~K~~i~~~~~~A~~~vV~Ar~~~~g~~~~~~~~~g~~~FlV~~rd~~~~~~~pGv~v~~~~~~~G~~~~~~~~l~f 276 (673)
|+|.|+||+. .||+++|+|++..+ +. +|+++|+||.+ .|||++.+.++++|+++.+++.|.|
T Consensus 165 ---G~K~~is~a~-~Ad~~~v~a~~~~~-~~------~g~~~flV~~~-------~pGv~v~~~~~~~g~~~~~~~~v~f 226 (393)
T 1rx0_A 165 ---GSKAFISGAG-ESDIYVVMCRTGGP-GP------KGISCIVVEKG-------TPGLSFGKKEKKVGWNSQPTRAVIF 226 (393)
T ss_dssp ---EEEEEEETTT-TCSEEEEEEESSSS-SG------GGEEEEEEETT-------CTTEEECCCCCBSSCTTSCEEEEEE
T ss_pred ---eEEEeecCCc-cCCEEEEEEEcCCC-CC------CceEEEEEeCC-------CCCeEecCcccccccCCCCceEEEE
Confidence 9999999999 99999999998532 22 38999999964 6999999999999999999999999
Q ss_pred cceecCcccccccCCcccCCCccccCCcccchHHHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCc
Q 048624 277 CSVRIPRDNLLNRFGDVSRDGKYTSSLPTINKRFAATLGELVGGRVGLAYSSVGVLKIAATIAIRYSLLRQQFGPPRKPE 356 (673)
Q Consensus 277 d~v~VP~~~lL~~~~~v~~~G~~~~~~~~~~~g~~~~~~~l~~~rl~~aa~~~G~a~~al~~a~~ya~~R~qfg~~~~~e 356 (673)
|||+||.+++||. ++.|+...+..+..+|+.+++.++|+++++++.+++|+++|+|||+|
T Consensus 227 d~v~Vp~~~~lg~----------------~g~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fG~~---- 286 (393)
T 1rx0_A 227 EDCAVPVANRIGS----------------EGQGFLIAVRGLNGGRINIASCSLGAAHASVILTRDHLNVRKQFGEP---- 286 (393)
T ss_dssp EEEEEEGGGEESS----------------TTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEE----
T ss_pred cCeEeCHHHcCCC----------------CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccCCCc----
Confidence 9999999999975 45678888888999999999999999999999999999999999999
Q ss_pred ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchhhhHHHHHHhHHHHHHHHHHHHHHHHHHHhCccCc
Q 048624 357 VSILDYQSQQHKLMPMLASTYAFHFATANLVEKYSEMKKTHDEQLVGDVHALSAGLKSYVTSYTAKSLSVCREACGGHGY 436 (673)
Q Consensus 357 ~~i~~~q~vq~~La~~~a~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~K~~at~~a~~~~~~~~q~~Gg~Gy 436 (673)
|+++|.+|++|++|.+.+++++++ ++.+++..+.+. .+....++++|+++++.+.++++.|+|+|||.||
T Consensus 287 --i~~~q~vq~~la~~~~~~~aar~~----~~~aa~~~d~~~----~~~~~~~~~aK~~a~~~a~~v~~~a~q~~Gg~g~ 356 (393)
T 1rx0_A 287 --LASNQYLQFTLADMATRLVAARLM----VRNAAVALQEER----KDAVALCSMAKLFATDECFAICNQALQMHGGYGY 356 (393)
T ss_dssp --GGGCHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHTTC----TTHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGGG
T ss_pred --hhhhHHHHHHHHHHHHHHHHHHHH----HHHHHHHHhCCC----cchhHHHHHHHHHHHHHHHHHHHHHHHhcCCeee
Confidence 999999999999999999996544 455555555542 3456788999999999999999999999999999
Q ss_pred cCccchhccccccccccccCccHHHHHHHHHHHHHH
Q 048624 437 AAVNRFGSLRNDHDIFQTFEGDNTVLLQQVAGDLLK 472 (673)
Q Consensus 437 ~~~~~l~r~~rd~~~~~~~eG~~~vl~~~ia~~ll~ 472 (673)
+.+++++++|||++...+++|++++++..+++.+|+
T Consensus 357 ~~~~~l~r~~Rda~~~~i~~Gt~~i~~~~ia~~~l~ 392 (393)
T 1rx0_A 357 LKDYAVQQYVRDSRVHQILEGSNEVMRILISRSLLQ 392 (393)
T ss_dssp BTTSTHHHHHHHHHHTTTSSSCHHHHHHHHHHHHHH
T ss_pred cCCChHHHHHHhccCceecCChHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999875
No 20
>3sf6_A Glutaryl-COA dehydrogenase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; HET: FDA; 1.70A {Mycobacterium smegmatis}
Probab=100.00 E-value=1.7e-57 Score=495.76 Aligned_cols=368 Identities=21% Similarity=0.258 Sum_probs=328.0
Q ss_pred hHhhhhhcCCCHHHHHH-HHHHHhcCCCCCCCccCCHHHHHHHHH-HHHHHHHHHcCCCCccccCC------CHHHHHHH
Q 048624 42 CAVIWLYERKAQGDTRE-SVEYFNSRPDLQTPVEILKDDHRELCW-RQLLGLVREAGIKPFKYVAE------DPAQYFAI 113 (673)
Q Consensus 42 ~~~m~~~l~~e~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~e~Gl~~~~~p~~------~~~~~~~~ 113 (673)
...|+|.+++||+++++ +++++.++ + . +...+.++.+. ++ +++|+.+.+.||+++.+ ++ ++.++..+
T Consensus 23 ~~~m~~~l~~e~~~l~~~~r~~~~~~-~-~-~~~~~~~~~~~-~p~~~~~~~l~~~Gl~~l~~-~e~GG~g~~~~~~~~v 97 (403)
T 3sf6_A 23 LIGINAVLSAEEREIRDTVRSVVQRR-I-K-PHIASWYEDGE-LPARELAVELGELGLLGMHL-KGYGCAGMSAVAYGLA 97 (403)
T ss_dssp HHTCGGGSCHHHHHHHHHHHHHHHHH-T-T-TTHHHHHHHTC-CCHHHHHHHHHHTTCSSTTS-CSTTCCCCCHHHHHHH
T ss_pred hhccCCCCCHHHHHHHHHHHHHHHHh-c-C-hhHHHHHhcCC-CCHHHHHHHHHHCCCCcccc-hhhCCCCCCHHHHHHH
Confidence 34799999999999998 77777665 2 2 12222333332 45 88999999999999999 76 88999999
Q ss_pred HHHHhccchhhHHHHHHhHhhHHHHHhccCChhhHHhHHhhhhcCCcceeeeccCCCCCCCcCCceeEEEEcCCCCEEEE
Q 048624 114 AEAVGSVDMSLGIKMGVQYSLWGGSVINLGTKKHRDKYYDGIDNLDYPGCFAMTELHHGSNVQGLQTVATFDPIKDEFII 193 (673)
Q Consensus 114 ~e~la~~~~s~~~~~~~h~~l~~~~i~~~gt~eq~~~~l~~i~~g~~~g~~a~TE~~~Gsd~~~~~TtA~~d~~~~~~vL 193 (673)
.|++++.|+++++.+.+|.+++...|..+|+++|+++|||++.+|+.++|+++|||++|||+.+++|+|+++ +|+|+|
T Consensus 98 ~eela~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~Gsd~~~~~t~A~~~--~~g~~l 175 (403)
T 3sf6_A 98 CLELEAGDSGIRSLVSVQGSLAMYAIHAFGSDEQKDQWLPDMASGHRIGCFGLTEPDHGSDPAGMRTRATRS--GDDWIL 175 (403)
T ss_dssp HHHHHHHCHHHHHHHHHHHHTHHHHHHHHCCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEE--TTEEEE
T ss_pred HHHHHHhcccHHHHHHHhhhhHHHHHHHhCCHHHHHHHHHHHhCCCceEEEEEccCCCCCCchhcEEEEEEE--CCEEEE
Confidence 999999999998888888777888999999999999999999999999999999999999999999999999 899999
Q ss_pred ecCCCCceeeeccCccccCcEEEEEEEEecCCCCCCCCCCCceEEEEEeecCCCCCCCCCCeEEecCCCCccCCCCCcee
Q 048624 194 NTPNDGAIKWWIGNAAVHGKFATVFAKLMLPTHDSKGYSDMGVHAFIVPIRDMKTHQTLPGIEIHDCGHKVGLNGVDNGA 273 (673)
Q Consensus 194 ntP~~~G~K~~i~~~~~~A~~~vV~Ar~~~~g~~~~~~~~~g~~~FlV~~rd~~~~~~~pGv~v~~~~~~~G~~~~~~~~ 273 (673)
| |+|+||||+. .||+++|+|+++ . |+++|+||.+ .|||++.+.|+++|+++++++.
T Consensus 176 n-----G~K~~is~a~-~Ad~~~v~ar~~-----~------g~~~flV~~~-------~pGv~v~~~~~~~G~r~~~~~~ 231 (403)
T 3sf6_A 176 T-----GTKMWITNGS-VADVAVVWARTD-----E------GIRGFVVPTD-------TPGFTANTIKSKMSLRASVTSE 231 (403)
T ss_dssp E-----EEEEEEETGG-GCSEEEEEEEET-----T------EEEEEEEETT-------STTEEEEECCSCSSCTTSCEEE
T ss_pred E-----EEEEeecCCc-ccCEEEEEEEeC-----C------ceEEEEEECC-------CCCeEecCCCCccCCCCCceeE
Confidence 9 9999999999 999999999974 2 8999999965 6999999999999999999999
Q ss_pred EEecceecCcccccccCCcccCCCccccCCcccchHHHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCC
Q 048624 274 LRFCSVRIPRDNLLNRFGDVSRDGKYTSSLPTINKRFAATLGELVGGRVGLAYSSVGVLKIAATIAIRYSLLRQQFGPPR 353 (673)
Q Consensus 274 l~fd~v~VP~~~lL~~~~~v~~~G~~~~~~~~~~~g~~~~~~~l~~~rl~~aa~~~G~a~~al~~a~~ya~~R~qfg~~~ 353 (673)
|.||||+||.+++||. +.|+...+..+..+|+.+++.++|+++++++.+++|+++|+|||+|
T Consensus 232 v~fd~v~Vp~~~~lg~-----------------~~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~p- 293 (403)
T 3sf6_A 232 LVLDGVRLPDSARLPG-----------------ATSLGAPLRCLNEARFGIVFGALGAARDCLETALAYACSREQFDRP- 293 (403)
T ss_dssp EEEEEEEEEGGGBCTT-----------------CCSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEE-
T ss_pred EEEccEEEcHHHccCC-----------------ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcccCCc-
Confidence 9999999999999974 2345677888999999999999999999999999999999999999
Q ss_pred CCcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchhhhHHHHHHhHHHHHHHHHHHHHHHHHHHhCc
Q 048624 354 KPEVSILDYQSQQHKLMPMLASTYAFHFATANLVEKYSEMKKTHDEQLVGDVHALSAGLKSYVTSYTAKSLSVCREACGG 433 (673)
Q Consensus 354 ~~e~~i~~~q~vq~~La~~~a~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~K~~at~~a~~~~~~~~q~~Gg 433 (673)
|+++|.+|++|++|.+.+++++.+ ++.+++..+.+ .+....++++|.++++.+.++++.|+|+|||
T Consensus 294 -----i~~~q~vq~~la~~~~~~~aar~~----~~~aa~~~d~~-----~~~~~~~~~aK~~a~~~a~~v~~~a~q~~Gg 359 (403)
T 3sf6_A 294 -----IGGFQLTQQKLADMTLEYGKGFLL----ALHLGRQKDAG-----ELAPEQVSLGKLNNVREAIEIARTARTVLGA 359 (403)
T ss_dssp -----GGGSHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHT-----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred -----chhhHHHHHHHHHHHHHHHHHHHH----HHHHHHHHhCC-----CCchHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 999999999999999999996544 45555555554 3345678999999999999999999999999
Q ss_pred cCccCccchhccccccccccccCccHHHHHHHHHHHHHH
Q 048624 434 HGYAAVNRFGSLRNDHDIFQTFEGDNTVLLQQVAGDLLK 472 (673)
Q Consensus 434 ~Gy~~~~~l~r~~rd~~~~~~~eG~~~vl~~~ia~~ll~ 472 (673)
+||+.+++++++|||+++..+++|++++++..+++.+|+
T Consensus 360 ~g~~~~~~~~r~~Rda~~~~i~~Gt~~i~~~~ia~~llg 398 (403)
T 3sf6_A 360 SGITGEYPVMRHANNLESVLTYEGTSEMHTLIIGQALTG 398 (403)
T ss_dssp GGGSTTSSHHHHHHHHHHHHHSSSCHHHHHHHHHHHHHS
T ss_pred eEccccCcHHHHHhhcccceeecCHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999984
No 21
>4hr3_A Putative acyl-COA dehydrogenase; ssgcid, seattle structural genomics center for infectious DI niaid; HET: FAD; 1.80A {Mycobacterium abscessus}
Probab=100.00 E-value=1.3e-57 Score=498.84 Aligned_cols=382 Identities=19% Similarity=0.256 Sum_probs=322.4
Q ss_pred hHhhhhhcCCCHHHHHH-HHHHHhcCCCCCCCccCCHHHHHH-----------------HHHHHHHHHHHHcCCCCcccc
Q 048624 42 CAVIWLYERKAQGDTRE-SVEYFNSRPDLQTPVEILKDDHRE-----------------LCWRQLLGLVREAGIKPFKYV 103 (673)
Q Consensus 42 ~~~m~~~l~~e~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~l~e~Gl~~~~~p 103 (673)
|..|+|.++++++++++ +++|+.++ +. +...+.++... ..++++|+.+.+.||+++.+|
T Consensus 2 ~~~M~~~~~~~~~~l~~~~r~~~~~~-~~--p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~G~~~~~~P 78 (415)
T 4hr3_A 2 PGSMDFAPSARAAELIAAVREFIDAE-VM--PVERAVLAHHDELLGARAGTTAELWHVPPELDSLKAKARAAGLWNLFLP 78 (415)
T ss_dssp -----CCCCHHHHHHHHHHHHHHHHT-HH--HHHHHHHHHHHHHHHTTCSCSGGGGSCCTHHHHHHHHHHHTTCSSTTCC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHh-CC--ccHHHHhhhccccccccccccccccCcchhHHHHHHHHHhCCCcCcCCC
Confidence 44699999999999999 77777665 11 11222222221 145899999999999999999
Q ss_pred CC------CHHHHHHHHHHHhccchhhHHHHH-HhHhhHHHHHhccCChhhHHhHHhhhhcCCcceeeeccCCC-CCCCc
Q 048624 104 AE------DPAQYFAIAEAVGSVDMSLGIKMG-VQYSLWGGSVINLGTKKHRDKYYDGIDNLDYPGCFAMTELH-HGSNV 175 (673)
Q Consensus 104 ~~------~~~~~~~~~e~la~~~~s~~~~~~-~h~~l~~~~i~~~gt~eq~~~~l~~i~~g~~~g~~a~TE~~-~Gsd~ 175 (673)
++ ++.+++.++|++++.|.+..+... .+...+...|..+|+++|+++|||++.+|+.++|+++|||+ +|||+
T Consensus 79 ~~~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~~gsd~ 158 (415)
T 4hr3_A 79 DPELGGGLSNSEYAPLAEQMGRSLFAPTVFNCNAPDSGNMEVLHRYGSQEQKEVWLEPLLEGDIRSAFCMTEPDVASSDA 158 (415)
T ss_dssp CTTTSCCCCHHHHHHHHHHHTTCSSHHHHTTCCTTHHHHHHHHHHHCCHHHHHHTHHHHHTTSCEEEEECCCTTSCTTSG
T ss_pred HHHCCCCCCHHHHHHHHHHHhcccchHHHHHHhccccchHHHHHHhCCHHHHHHHHHHHhCCCceeEEEEcCCCCCCCch
Confidence 76 899999999999998754433211 11122346788999999999999999999999999999999 99999
Q ss_pred CCceeEEEEcCCCCEEEEecCCCCceeeeccCcccc--CcEEEEEEEEecCCCCCCCCCCCceEEEEEeecCCCCCCCCC
Q 048624 176 QGLQTVATFDPIKDEFIINTPNDGAIKWWIGNAAVH--GKFATVFAKLMLPTHDSKGYSDMGVHAFIVPIRDMKTHQTLP 253 (673)
Q Consensus 176 ~~~~TtA~~d~~~~~~vLntP~~~G~K~~i~~~~~~--A~~~vV~Ar~~~~g~~~~~~~~~g~~~FlV~~rd~~~~~~~p 253 (673)
..++|+|+++ +|+|+|| |+|+||||+. + |||++|+|+++.+++. ++|+++|+||.+ .|
T Consensus 159 ~~~~t~A~~~--g~g~~ln-----G~K~~is~a~-~~~Ad~~~v~a~~~~~~~~-----~~g~~~flV~~~-------~p 218 (415)
T 4hr3_A 159 TNMAATAVVE--GDEVVIN-----GRKWWSTGVG-HPDCKVIIFMGLTDPNAHR-----YARHSMVLVPMD-------TP 218 (415)
T ss_dssp GGCCCEEEEE--TTEEEEE-----EEEEEEETTT-STTEEEEEEEEECCTTSCT-----TSSEEEEEEETT-------ST
T ss_pred hhCeeEEEEE--CCEEEEe-----eEEeeECCCC-CCCCCEEEEEEEeCCCCCC-----CCceEEEEEEcC-------CC
Confidence 9999999998 8999999 9999999997 6 9999999998654322 248999999964 69
Q ss_pred CeEEecCCCCccCCCCC--ceeEEecceecCcccccccCCcccCCCccccCCcccchHHHHHHhhHhHHHHHHHHHHHHH
Q 048624 254 GIEIHDCGHKVGLNGVD--NGALRFCSVRIPRDNLLNRFGDVSRDGKYTSSLPTINKRFAATLGELVGGRVGLAYSSVGV 331 (673)
Q Consensus 254 Gv~v~~~~~~~G~~~~~--~~~l~fd~v~VP~~~lL~~~~~v~~~G~~~~~~~~~~~g~~~~~~~l~~~rl~~aa~~~G~ 331 (673)
||++.+.|+++|+++++ ++.|.||||+||.+++||. ++.|+...+..+..+|+.+++.++|+
T Consensus 219 Gv~v~~~~~~~g~r~~~~~~~~v~fddv~Vp~~~~lg~----------------~~~g~~~~~~~l~~~r~~~aa~~~G~ 282 (415)
T 4hr3_A 219 GITVERMLPTMGFYDEPGGHGVVSFDNVRLPADAFIAG----------------PGKGFEIAQGRLGPGRVHHAMRLIGL 282 (415)
T ss_dssp TEEEEEECCBTTBCCTTTCEEEEEEEEEEEEGGGBSSC----------------TTCHHHHHHHHCSHHHHHHHHHHHHH
T ss_pred ceEecCCCCccccCCCCCCeeEEEEccEEECHHHcCCC----------------CCchHHHHHHHHhHHHHHHHHHHHHH
Confidence 99999999999999987 9999999999999999985 46788888899999999999999999
Q ss_pred HHHHHHHHHHHhhhccccCCCCCCcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchhhhHHHHHHh
Q 048624 332 LKIAATIAIRYSLLRQQFGPPRKPEVSILDYQSQQHKLMPMLASTYAFHFATANLVEKYSEMKKTHDEQLVGDVHALSAG 411 (673)
Q Consensus 332 a~~al~~a~~ya~~R~qfg~~~~~e~~i~~~q~vq~~La~~~a~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (673)
++++++.+++|+++|+|||+| |+++|.+|++|++|.+.+++++++ ++.+++..+... ..+....+++
T Consensus 283 a~~al~~a~~~a~~R~~fg~~------i~~~q~vq~~la~~~~~~~aar~~----~~~aa~~~d~~~---~~~~~~~~~~ 349 (415)
T 4hr3_A 283 AEVALEHACRRGLDRTAFGKP------LVNLGGNRERIADARIAINQTRLL----VLHAAWLLDTVG---IMGALSAVSE 349 (415)
T ss_dssp HHHHHHHHHHHHHHCEETTEE------GGGSTTHHHHHHHHHHHHHHHHHH----HHHHHHHHHHTC---GGGCHHHHHH
T ss_pred HHHHHHHHHHHHhcCccCCCc------HHHhHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHhcc---CCchHHHHHH
Confidence 999999999999999999999 999999999999999999996544 455555555421 0345677899
Q ss_pred HHHHHHHHHHHHHHHHHHHhCccCccCccchhccccccccccccCccHHHHHHHHHHHHHHHHH
Q 048624 412 LKSYVTSYTAKSLSVCREACGGHGYAAVNRFGSLRNDHDIFQTFEGDNTVLLQQVAGDLLKQYK 475 (673)
Q Consensus 412 ~K~~at~~a~~~~~~~~q~~Gg~Gy~~~~~l~r~~rd~~~~~~~eG~~~vl~~~ia~~ll~~~~ 475 (673)
+|+++++.+.++++.|+|+|||.||+.+++++|+|||+++..+++|++++++..+++.+|+.|+
T Consensus 350 aK~~a~e~a~~v~~~a~qi~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~ei~~~~ia~~~l~~~~ 413 (415)
T 4hr3_A 350 IKVAAPNMAQQVIDMAIQIHGGGGLSNDFPLAAAWVNARALRLADGPDEVHRGVVARIELAKYA 413 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHHTGGGGGSSSSSHHHHHHHHHHTTTTTSCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHhCccccCCCchHHHHHHHhhhheeecCcHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999999999999999999998754
No 22
>2ix5_A Acyl-coenzyme A oxidase 4, peroxisomal; FAD, ACX4, flavin, peroxisome, glyoxysome, fatty acid metabo lipid metabolism, acyl-COA oxidase; HET: CAA FAD; 2.7A {Arabidopsis thaliana} PDB: 2ix6_A*
Probab=100.00 E-value=1.8e-57 Score=499.18 Aligned_cols=369 Identities=23% Similarity=0.285 Sum_probs=324.2
Q ss_pred hhhhhcCCCHHHHHH-HHHHHhcCCCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCCccccCC-----CHHHHHHHHHHH
Q 048624 44 VIWLYERKAQGDTRE-SVEYFNSRPDLQTPVEILKDDHRELCWRQLLGLVREAGIKPFKYVAE-----DPAQYFAIAEAV 117 (673)
Q Consensus 44 ~m~~~l~~e~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~Gl~~~~~p~~-----~~~~~~~~~e~l 117 (673)
.|++.+++||+++++ +++|+.++. . +...+.++... +++++|+.+.+.||+++.+|+- ++.+...++|++
T Consensus 50 ~~~~~l~~e~~~l~~~~r~f~~~~~--~-p~~~~~~~~~~-~p~~~~~~l~e~Gl~~l~~pe~GG~G~~~~~~~~v~eel 125 (436)
T 2ix5_A 50 HFNDLLTPEEQAIRKKVRECMEKEV--A-PIMTEYWEKAE-FPFHITPKLGAMGVAGGSIKGYGCPGLSITANAIATAEI 125 (436)
T ss_dssp CGGGGSCHHHHHHHHHHHHHHHHHT--H-HHHHHHHHHTC-CCGGGHHHHHTTTCTTTTCCSTTCCCCCHHHHHHHHHHH
T ss_pred hcCCCCCHHHHHHHHHHHHHHHhhC--C-hhhHHHHhcCC-CCHHHHHHHHHcCCCcCcCCCCCCCCCCHHHHHHHHHHH
Confidence 477889999999998 777776652 1 12222233333 3478999999999999999931 789999999999
Q ss_pred hccchhhHHHHHHhHhhHHHHHhccCChhhHHhHHhhhhcCCcceeeeccCCCCCCCcCCceeEEEEcCCCCEEEEecCC
Q 048624 118 GSVDMSLGIKMGVQYSLWGGSVINLGTKKHRDKYYDGIDNLDYPGCFAMTELHHGSNVQGLQTVATFDPIKDEFIINTPN 197 (673)
Q Consensus 118 a~~~~s~~~~~~~h~~l~~~~i~~~gt~eq~~~~l~~i~~g~~~g~~a~TE~~~Gsd~~~~~TtA~~d~~~~~~vLntP~ 197 (673)
++.|+++++.+.+|..+++..|..+|+++|+++|||++.+|+.++|+++|||++|||+.+++|+|+++ +|+|+||
T Consensus 126 a~~~~~~~~~~~~~~~~~~~~l~~~gt~~qk~~~l~~l~~G~~~~a~a~tEp~~GSd~~~~~t~A~~~--gdg~vLn--- 200 (436)
T 2ix5_A 126 ARVDASCSTFILVHSSLGMLTIALCGSEAQKEKYLPSLAQLNTVACWALTEPDNGSDASGLGTTATKV--EGGWKIN--- 200 (436)
T ss_dssp HHHCHHHHHHHHHHHTTHHHHHHHHSCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEE--TTEEEEE---
T ss_pred HhhCccHHHHHHhHHHHHHHHHHHhCCHHHHHHHHHHHhCCCeeeEEEecCCCCCCCcccceEEEEEe--CCEEEEe---
Confidence 99999988877788777888899999999999999999999999999999999999999999999999 8999999
Q ss_pred CCceeeeccCccccCcEEEEEEEEecCCCCCCCCCCCceEEEEEeecCCCCCCCCCCeEEecCCCCccCCCCCceeEEec
Q 048624 198 DGAIKWWIGNAAVHGKFATVFAKLMLPTHDSKGYSDMGVHAFIVPIRDMKTHQTLPGIEIHDCGHKVGLNGVDNGALRFC 277 (673)
Q Consensus 198 ~~G~K~~i~~~~~~A~~~vV~Ar~~~~g~~~~~~~~~g~~~FlV~~rd~~~~~~~pGv~v~~~~~~~G~~~~~~~~l~fd 277 (673)
|+|+||||+. .|||++|+|++.. +. ++++|+||.+ .|||++.+.|+++|+++++++.|.||
T Consensus 201 --G~K~~is~a~-~Ad~~lv~Ar~~~---~~------~~~~flV~~~-------~pGv~v~~~~~~~G~r~~~~~~v~fd 261 (436)
T 2ix5_A 201 --GQKRWIGNST-FADLLIIFARNTT---TN------QINGFIVKKD-------APGLKATKIPNKIGLRMVQNGDILLQ 261 (436)
T ss_dssp --EEEEEEETTT-TCSEEEEEEEETT---TS------SEEEEEEETT-------CTTEEEEECCCBSSSTTSCEEEEEEE
T ss_pred --eeccCCCCCc-ccCEEEEEEEECC---CC------cEEEEEEECC-------CCCeEeeccccccCCCcCCceeEEec
Confidence 9999999999 9999999999852 12 7899999964 69999999999999999999999999
Q ss_pred ceecCcccccccCCcccCCCccccCCcccchHHHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCcc
Q 048624 278 SVRIPRDNLLNRFGDVSRDGKYTSSLPTINKRFAATLGELVGGRVGLAYSSVGVLKIAATIAIRYSLLRQQFGPPRKPEV 357 (673)
Q Consensus 278 ~v~VP~~~lL~~~~~v~~~G~~~~~~~~~~~g~~~~~~~l~~~rl~~aa~~~G~a~~al~~a~~ya~~R~qfg~~~~~e~ 357 (673)
||+||.+++|+.. .+|......+..+|+.+++.++|+++++++.+++|+++|+|||+|
T Consensus 262 dv~VP~~~~lg~~-----------------~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~qfG~p----- 319 (436)
T 2ix5_A 262 NVFVPDEDRLPGV-----------------NSFQDTSKVLAVSRVMVAWQPIGISMGIYDMCHRYLKERKQFGAP----- 319 (436)
T ss_dssp EEEEEGGGBCTTC-----------------SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEE-----
T ss_pred cEEECHHHcCCcc-----------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCCcc-----
Confidence 9999999999741 246677788999999999999999999999999999999999999
Q ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchhhhHHHHHHhHHHHHHHHHHHHHHHHHHHhCccCcc
Q 048624 358 SILDYQSQQHKLMPMLASTYAFHFATANLVEKYSEMKKTHDEQLVGDVHALSAGLKSYVTSYTAKSLSVCREACGGHGYA 437 (673)
Q Consensus 358 ~i~~~q~vq~~La~~~a~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~K~~at~~a~~~~~~~~q~~Gg~Gy~ 437 (673)
|++||.+|++|++|.+.+++++++ ++.+++..+.+ ......++++|+++++.+.++++.|+|+|||.||+
T Consensus 320 -i~~~q~vq~~la~~~~~~~aar~l----~~~aa~~~d~g-----~~~~~~as~aK~~a~e~a~~v~~~a~q~~Gg~G~~ 389 (436)
T 2ix5_A 320 -LAAFQLNQQKLVQMLGNVQAMFLM----GWRLCKLYETG-----QMTPGQASLGKAWISSKARETASLGRELLGGNGIL 389 (436)
T ss_dssp -GGGSHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHTT-----CCCHHHHHHHHHHHHHHHHHHHHHHHHHTGGGGGB
T ss_pred -hhhcHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHCC-----CCchHHHHHHHHHHHHHHHHHHHHHHHHhCccccc
Confidence 999999999999999999996544 45555555654 23345688999999999999999999999999999
Q ss_pred CccchhccccccccccccCccHHHHHHHHHHHHHH
Q 048624 438 AVNRFGSLRNDHDIFQTFEGDNTVLLQQVAGDLLK 472 (673)
Q Consensus 438 ~~~~l~r~~rd~~~~~~~eG~~~vl~~~ia~~ll~ 472 (673)
.+++++++|||++...+++|++++++..+++.+++
T Consensus 390 ~e~~l~r~~Rda~~~~i~~Gt~ei~~~~iar~llg 424 (436)
T 2ix5_A 390 ADFLVAKAFCDLEPIYTYEGTYDINTLVTGREVTG 424 (436)
T ss_dssp GGGSHHHHHHHHHHHHHSSSCHHHHHHHHHHHHHS
T ss_pred cCChHHHHHHHhhcceeecCHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999874
No 23
>2eba_A Putative glutaryl-COA dehydrogenase; thermus thermophilius, FAD, STRU genomics, NPPSFA; HET: FAD; 2.21A {Thermus thermophilus}
Probab=100.00 E-value=3.5e-57 Score=490.54 Aligned_cols=368 Identities=21% Similarity=0.254 Sum_probs=321.4
Q ss_pred hhhhhcCCCHHHHHH-HHHHHhcCCCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCCccccCC------CHHHHHHHHHH
Q 048624 44 VIWLYERKAQGDTRE-SVEYFNSRPDLQTPVEILKDDHRELCWRQLLGLVREAGIKPFKYVAE------DPAQYFAIAEA 116 (673)
Q Consensus 44 ~m~~~l~~e~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~Gl~~~~~p~~------~~~~~~~~~e~ 116 (673)
.|+|.+++|++++++ +++++.++ + . +...+.++... +++++|+.+.+.||+++.+|++ ++.+.+.++|+
T Consensus 6 ~~~~~~~~~~~~l~~~~r~~~~~~-~-~-~~~~~~d~~~~-~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~ee 81 (385)
T 2eba_A 6 ALEDLLTPEEKEVQKAARRFLEKE-A-L-PHIRDWWEEGV-FPTHLIPRFAELGFLGPTLPPEYGGAGVSSAAYGLICYE 81 (385)
T ss_dssp CGGGGSCHHHHHHHHHHHHHHHHH-T-H-HHHHHHHHTTC-CCGGGHHHHHHHTCSSTTSCGGGTCCCCCHHHHHHHHHH
T ss_pred ccCCCCCHHHHHHHHHHHHHHHHh-C-C-ccHHHHHHhCC-CCHHHHHHHHHCCCcCCCCchhhCCCCCCHHHHHHHHHH
Confidence 488999999999998 67776654 2 1 12222333333 3478999999999999999965 78999999999
Q ss_pred HhccchhhHHHHHHhHhhHHHHHhccCChhhHHhHHhhhhcCCcceeeeccCCCCCCCc-CCceeEEEEcCCCCEEEEec
Q 048624 117 VGSVDMSLGIKMGVQYSLWGGSVINLGTKKHRDKYYDGIDNLDYPGCFAMTELHHGSNV-QGLQTVATFDPIKDEFIINT 195 (673)
Q Consensus 117 la~~~~s~~~~~~~h~~l~~~~i~~~gt~eq~~~~l~~i~~g~~~g~~a~TE~~~Gsd~-~~~~TtA~~d~~~~~~vLnt 195 (673)
+++.|+++++.+.+|..++...|..+|+++|+++|||++.+|++++|+++|||++|||+ .+++|+|+++ +|+|+||
T Consensus 82 la~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~~t~A~~~--~~g~~ln- 158 (385)
T 2eba_A 82 LERVDSGLRSFVSVQSSLVMYPIYAYGSEEQKREFLPKLARGEMVGCFGLTEPDGGSDPYGNMKTRARRE--GDTWVLN- 158 (385)
T ss_dssp HHHHCHHHHHHHHHHHHTTHHHHHHHSCHHHHHHHHHHHHTTSSCEEEECCCTTCTTSTTTTCCCEEEC----CEEEEE-
T ss_pred HHHhCchHHHHHHHHHhHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEeCCCCcCCCccccCeeEEEEe--CCEEEEE-
Confidence 99999999988888877778889999999999999999999999999999999999999 9999999988 8999999
Q ss_pred CCCCceeeeccCccccCcEEEEEEEEecCCCCCCCCCCCceEEEEEeecCCCCCCCCCCeEEecCCCCccCCCCCceeEE
Q 048624 196 PNDGAIKWWIGNAAVHGKFATVFAKLMLPTHDSKGYSDMGVHAFIVPIRDMKTHQTLPGIEIHDCGHKVGLNGVDNGALR 275 (673)
Q Consensus 196 P~~~G~K~~i~~~~~~A~~~vV~Ar~~~~g~~~~~~~~~g~~~FlV~~rd~~~~~~~pGv~v~~~~~~~G~~~~~~~~l~ 275 (673)
|+|+|+||+. .|||++|+|+++ + . .+++|+||.+ .|||++.+.|+++|+++++++.|.
T Consensus 159 ----G~K~~~s~~~-~Ad~~~v~a~~~-~---g------~~~~flV~~~-------~pGv~v~~~~~~~G~~~~~~~~v~ 216 (385)
T 2eba_A 159 ----GTKMWITNGN-LAHLAVIWAKDE-G---G------EVLGFLVPTD-------TPGFQAREVKRKMSLRASVTSELV 216 (385)
T ss_dssp ----EEEEEEETTT-TCSEEEEEEECC-------------EEEEEEETT-------STTEEEEECCSBSSSCSSCEEEEE
T ss_pred ----eeeeccCCCc-ccCEEEEEEEeC-C---C------cEEEEEEeCC-------CCCeEecccccccccccCceeEEE
Confidence 9999999999 999999999974 1 1 2889999964 699999999999999999999999
Q ss_pred ecceecCcccccccCCcccCCCccccCCcccchHHHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCC
Q 048624 276 FCSVRIPRDNLLNRFGDVSRDGKYTSSLPTINKRFAATLGELVGGRVGLAYSSVGVLKIAATIAIRYSLLRQQFGPPRKP 355 (673)
Q Consensus 276 fd~v~VP~~~lL~~~~~v~~~G~~~~~~~~~~~g~~~~~~~l~~~rl~~aa~~~G~a~~al~~a~~ya~~R~qfg~~~~~ 355 (673)
||||+||.+++| . +++|+......+..+|+.+++.++|+++++++.+++|+++|+|||+|
T Consensus 217 f~~v~Vp~~~~l-~----------------~~~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~~--- 276 (385)
T 2eba_A 217 LEEVRVPESLRL-P----------------KALGLKAPLSCLTQARFGIAWGAMGALEAVYEEAVAFAKSRSTFGEP--- 276 (385)
T ss_dssp EEEEEEEGGGBC-T----------------TCCSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCBSSSSB---
T ss_pred EccEEEcHHHcc-C----------------CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCeeCCee---
Confidence 999999999999 3 23456677788889999999999999999999999999999999999
Q ss_pred cccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchhhhHHHHHHhHHHHHHHHHHHHHHHHHHHhCccC
Q 048624 356 EVSILDYQSQQHKLMPMLASTYAFHFATANLVEKYSEMKKTHDEQLVGDVHALSAGLKSYVTSYTAKSLSVCREACGGHG 435 (673)
Q Consensus 356 e~~i~~~q~vq~~La~~~a~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~K~~at~~a~~~~~~~~q~~Gg~G 435 (673)
|+++|.+|++|+++.+.+++++++ ++.+++..+.+ .+....++++|.++++.+.++++.|+|+|||.|
T Consensus 277 ---i~~~q~vq~~la~~~~~~~aar~~----~~~aa~~~d~g-----~~~~~~~~~aK~~a~~~a~~v~~~a~q~~Gg~g 344 (385)
T 2eba_A 277 ---LAKKQLVQAKLAEMLAWHTEGLLL----AWRLARLKDEG-----KLTPAQVSLAKRQNVWKALQAARMARDILGGSG 344 (385)
T ss_dssp ---GGGSHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHTT-----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGG
T ss_pred ---HHhCHHHHHHHHHHHHHHHHHHHH----HHHHHHHHhCC-----CCchHHHHHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 999999999999999999996544 45555555554 234567889999999999999999999999999
Q ss_pred ccCccchhccccccccccccCccHHHHHHHHHHHHHH
Q 048624 436 YAAVNRFGSLRNDHDIFQTFEGDNTVLLQQVAGDLLK 472 (673)
Q Consensus 436 y~~~~~l~r~~rd~~~~~~~eG~~~vl~~~ia~~ll~ 472 (673)
|+.+++++++|||++...+++|++++++..+++.+++
T Consensus 345 ~~~~~~l~r~~Rda~~~~~~~G~~~~~~~~ia~~llg 381 (385)
T 2eba_A 345 ITLEYHAIRHMLNLETVYTYEGTHDVHTLVLGREITG 381 (385)
T ss_dssp GBTTSSHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHS
T ss_pred cCCcChHHHHHHhccCceeeCChHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999874
No 24
>3swo_A Glutaryl-COA dehydrogenase; ssgcid, glutaryl-COA dehdrogenase, mycobacerium smegmatis, S genomics; HET: FDA; 1.45A {Mycobacterium smegmatis}
Probab=100.00 E-value=2.6e-57 Score=493.80 Aligned_cols=369 Identities=22% Similarity=0.272 Sum_probs=328.6
Q ss_pred chHhhhhhcCCCHHHHHH-HHHHHhcCCCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCCccccCC------CHHHHHHH
Q 048624 41 LCAVIWLYERKAQGDTRE-SVEYFNSRPDLQTPVEILKDDHRELCWRQLLGLVREAGIKPFKYVAE------DPAQYFAI 113 (673)
Q Consensus 41 ~~~~m~~~l~~e~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~Gl~~~~~p~~------~~~~~~~~ 113 (673)
+...|++.+++||+++++ +++++.++. . +...+.++.+. +++++|+.+.+.||+++.+ ++ ++.+.+.+
T Consensus 18 ~~~~m~~~l~~e~~~l~~~~r~~~~~~~--~-~~~~~~~~~~~-~~~~~~~~l~~~Gl~~l~~-~e~GG~g~~~~~~~~v 92 (399)
T 3swo_A 18 ELFDTDRLLDQDERDIAATVRQFVDTRL--K-PNVEGWFESAT-LPSELAKEFGNLGVLGMHL-QGYGCAGTNAVSYGLA 92 (399)
T ss_dssp HHHTGGGGSCHHHHHHHHHHHHHHHHHT--H-HHHHHHHHHTC-CCTTHHHHHHHHTCTTTTS-CSTTCCCCCHHHHHHH
T ss_pred ccccCCCCCCHHHHHHHHHHHHHHHHhC--C-hhHHHHHhhCC-CCHHHHHHHHHCCCCcCCh-hhhCCCCCCHHHHHHH
Confidence 344689999999999998 777776642 1 12223344333 3488999999999999999 76 88999999
Q ss_pred HHHHhccchhhHHHHHHhHhhHHHHHhccCChhhHHhHHhhhhcCCcceeeeccCCCCCCCcCCceeEEEEcCCCCEEEE
Q 048624 114 AEAVGSVDMSLGIKMGVQYSLWGGSVINLGTKKHRDKYYDGIDNLDYPGCFAMTELHHGSNVQGLQTVATFDPIKDEFII 193 (673)
Q Consensus 114 ~e~la~~~~s~~~~~~~h~~l~~~~i~~~gt~eq~~~~l~~i~~g~~~g~~a~TE~~~Gsd~~~~~TtA~~d~~~~~~vL 193 (673)
+|++++.|+++++.+.+|..++...|..+|+++|+++|||++.+|+.++|+++|||++|||+.+++|+|+++ +|+|+|
T Consensus 93 ~eel~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~Gsd~~~~~t~A~~~--~~g~~l 170 (399)
T 3swo_A 93 CMELEAGDSGFRSFVSVQGSLSMFSIYRYGSEEQKNEWLPRLAAGDAIGCFGLTEPDFGSNPAGMRTRARRD--GSDWIL 170 (399)
T ss_dssp HHHHHHHCHHHHHHHHHHTTTHHHHHHHHCCHHHHHHHHHHHHHTSSCEEEECCBTTBSSCGGGCCCEEEEE--TTEEEE
T ss_pred HHHHHHhCccHHHHHHHHhhhhhhHHHhcCCHHHHHHHHHHHhCCCeeeEEEecCCCCCCCCccceEEEEEe--CCEEEE
Confidence 999999999998888888777888999999999999999999999999999999999999999999999999 899999
Q ss_pred ecCCCCceeeeccCccccCcEEEEEEEEecCCCCCCCCCCCceEEEEEeecCCCCCCCCCCeEEecCCCCccCCCCCcee
Q 048624 194 NTPNDGAIKWWIGNAAVHGKFATVFAKLMLPTHDSKGYSDMGVHAFIVPIRDMKTHQTLPGIEIHDCGHKVGLNGVDNGA 273 (673)
Q Consensus 194 ntP~~~G~K~~i~~~~~~A~~~vV~Ar~~~~g~~~~~~~~~g~~~FlV~~rd~~~~~~~pGv~v~~~~~~~G~~~~~~~~ 273 (673)
| |+|+|++++. .|||++|+|+++ . |+++|+||.+ .|||++.+.|+++|+++++++.
T Consensus 171 n-----G~K~~vs~a~-~Ad~~~v~a~~~-----~------g~~~flV~~~-------~pGv~v~~~~~~~G~r~~~~~~ 226 (399)
T 3swo_A 171 N-----GTKMWITNGN-LADVATVWAQTD-----D------GIRGFLVPTD-------TPGFTANEIHRKLSLRASVTSE 226 (399)
T ss_dssp E-----EEEEEEETTT-TCSEEEEEEBCT-----T------SCEEEEEETT-------STTEEEEECCCBSSCCSSCEEE
T ss_pred E-----EEEEeECCCC-ccCEEEEEEEeC-----C------ceEEEEEeCC-------CCCeEeecCcCcccCCCCceeE
Confidence 9 9999999999 999999999974 2 7899999965 6999999999999999999999
Q ss_pred EEecceecCcccccccCCcccCCCccccCCcccchHHHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCC
Q 048624 274 LRFCSVRIPRDNLLNRFGDVSRDGKYTSSLPTINKRFAATLGELVGGRVGLAYSSVGVLKIAATIAIRYSLLRQQFGPPR 353 (673)
Q Consensus 274 l~fd~v~VP~~~lL~~~~~v~~~G~~~~~~~~~~~g~~~~~~~l~~~rl~~aa~~~G~a~~al~~a~~ya~~R~qfg~~~ 353 (673)
|.||||+||.+++||. +.|+...+..+..+|+.+++.++|+++++++.+++|+++|+|||+|
T Consensus 227 v~fd~v~Vp~~~~lg~-----------------~~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~~a~~R~~fG~~- 288 (399)
T 3swo_A 227 LVLDNVRLPASAQLPL-----------------AEGLSAPLSCLNEARFGIVFGALGAARDSLETTIAYTQSREVFDKP- 288 (399)
T ss_dssp EEEEEEEECGGGBCTT-----------------CCSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEE-
T ss_pred EEEccEEEcHHHcCCC-----------------ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCeeCCcc-
Confidence 9999999999999974 2345677888999999999999999999999999999999999999
Q ss_pred CCcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchhhhHHHHHHhHHHHHHHHHHHHHHHHHHHhCc
Q 048624 354 KPEVSILDYQSQQHKLMPMLASTYAFHFATANLVEKYSEMKKTHDEQLVGDVHALSAGLKSYVTSYTAKSLSVCREACGG 433 (673)
Q Consensus 354 ~~e~~i~~~q~vq~~La~~~a~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~K~~at~~a~~~~~~~~q~~Gg 433 (673)
|+++|.+|++|+++.+.++++++ +++.+++..+.+ .+....++++|.++++.+.++++.|+|+|||
T Consensus 289 -----i~~~q~vq~~la~~~~~~~aar~----~~~~aa~~~d~~-----~~~~~~~~~aK~~a~~~a~~v~~~a~q~~Gg 354 (399)
T 3swo_A 289 -----LSNYQLTQEKLANMTVELGKGML----LAIHLGRIKDAE-----GVRPEQISLGKLNNVREAIAIARECRTLLGG 354 (399)
T ss_dssp -----GGGSHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHTT-----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred -----hhhCHHHHHHHHHHHHHHHHHHH----HHHHHHHHHhCC-----CCchHHHHHHHHHHHHHHHHHHHHHHHhhCc
Confidence 99999999999999999999554 445555666655 3446678999999999999999999999999
Q ss_pred cCccCccchhccccccccccccCccHHHHHHHHHHHHHH
Q 048624 434 HGYAAVNRFGSLRNDHDIFQTFEGDNTVLLQQVAGDLLK 472 (673)
Q Consensus 434 ~Gy~~~~~l~r~~rd~~~~~~~eG~~~vl~~~ia~~ll~ 472 (673)
+||+.+++++++|||+++..+++|++++++..+++.+++
T Consensus 355 ~g~~~~~~~~r~~Rda~~~~i~~Gt~~i~~~~ia~~llg 393 (399)
T 3swo_A 355 SGITLEYSPLRHANNLESVLTYEGTSEMHLLSIGKALTG 393 (399)
T ss_dssp GGGBSSSTHHHHHHHHHHHHHSSSCHHHHHHHHHHHHHS
T ss_pred ccccCCCcHHHHHHHhhcceeecCHHHHHHHHHHHHHcC
Confidence 999999999999999999999999999999999999984
No 25
>2uxw_A VERY-long-chain specific acyl-COA dehydrogenase; fatty acid metabolism, transit peptide, disease mutation, LI metabolism, coenzyme A dehydrogenase; HET: FAD TH3; 1.45A {Homo sapiens} PDB: 3b96_A*
Probab=100.00 E-value=6.1e-55 Score=495.91 Aligned_cols=368 Identities=25% Similarity=0.338 Sum_probs=318.3
Q ss_pred HHH-HHHHHhcCCCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCCccccCC------CHHHHHHHHHHHhccchhhHHHH
Q 048624 56 TRE-SVEYFNSRPDLQTPVEILKDDHRELCWRQLLGLVREAGIKPFKYVAE------DPAQYFAIAEAVGSVDMSLGIKM 128 (673)
Q Consensus 56 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~Gl~~~~~p~~------~~~~~~~~~e~la~~~~s~~~~~ 128 (673)
+++ +++++.+. + . + ...++... .++++|+.+++.||+++.+|++ ++.+...+.|++++.|+++++.+
T Consensus 57 l~~~~~~~~~~~-~-~-~--~~~d~~~~-~p~~~~~~l~e~Gl~~l~~P~e~GG~gl~~~~~~~v~e~l~~~~~s~a~~~ 130 (607)
T 2uxw_A 57 LVEPVSRFFEEV-N-D-P--AKNDALEM-VEETTWQGLKELGAFGLQVPSELGGVGLCNTQYARLVEIVGMHDLGVGITL 130 (607)
T ss_dssp HHHHHHHHHHHT-C-C-H--HHHHHHTS-CCHHHHHHHHHTTTTCTTSCGGGTSCCCCHHHHHHHHHHHHHHCHHHHHHH
T ss_pred HHHHHHHHHHhh-c-C-H--HHhccccC-CCHHHHHHHHHcCCcCCCCChhhCCCCCCHHHHHHHHHHHHHcccHHHHHH
Confidence 556 77777665 2 1 1 11233333 3489999999999999999965 78999999999999999999888
Q ss_pred HHhHhhHHHHHhccCChhhHHhHHhhhhcCCcceeeeccCCCCCCCcCCceeEEEEcCCCCEEEEecCCCCceeeeccCc
Q 048624 129 GVQYSLWGGSVINLGTKKHRDKYYDGIDNLDYPGCFAMTELHHGSNVQGLQTVATFDPIKDEFIINTPNDGAIKWWIGNA 208 (673)
Q Consensus 129 ~~h~~l~~~~i~~~gt~eq~~~~l~~i~~g~~~g~~a~TE~~~Gsd~~~~~TtA~~d~~~~~~vLntP~~~G~K~~i~~~ 208 (673)
++|.+++..+|..+|+++||++|||++.+|++++|+++|||++|||+.+++|+|+++++|++|+|| |+|+|||++
T Consensus 131 ~~~~~~g~~~l~~~Gt~eqk~~~Lp~l~~G~~~~~~alTEp~aGSD~~~~~t~A~~~~dG~~y~Ln-----G~K~~is~~ 205 (607)
T 2uxw_A 131 GAHQSIGFKGILLFGTKAQKEKYLPKLASGETVAAFCLTEPSSGSDAASIRTSAVPSPCGKYYTLN-----GSKLWISNG 205 (607)
T ss_dssp HHHHTTTTHHHHHHCCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEECTTSSEEEEE-----EEEEEEETT
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCCCcccceeEEEEeCCCCEEEEE-----eEEEeecCC
Confidence 888666678899999999999999999999999999999999999999999999998667799999 999999999
Q ss_pred cccCcEEEEEEEEecCCCCCCCCCCCceEEEEEeecCCCCCCCCCCeEEecCCCCccCCCCCceeEEecceecCcccccc
Q 048624 209 AVHGKFATVFAKLMLPTHDSKGYSDMGVHAFIVPIRDMKTHQTLPGIEIHDCGHKVGLNGVDNGALRFCSVRIPRDNLLN 288 (673)
Q Consensus 209 ~~~A~~~vV~Ar~~~~g~~~~~~~~~g~~~FlV~~rd~~~~~~~pGv~v~~~~~~~G~~~~~~~~l~fd~v~VP~~~lL~ 288 (673)
+ .||+++|+|++...+++. +.+++|+++|+||.+ .|||++++.|+++|+++++++.|.|+||+||.+++||
T Consensus 206 ~-~Ad~~lV~Ar~~~~~~~~-g~~~~gis~flVp~~-------~~Gv~v~~~~~~~G~rg~~t~~v~fddv~VP~~~llG 276 (607)
T 2uxw_A 206 G-LADIFTVFAKTPVTDPAT-GAVKEKITAFVVERG-------FGGITHGPPEKKMGIKASNTAEVFFDGVRVPSENVLG 276 (607)
T ss_dssp T-TCSEEEEEEEEEEECTTT-CCEEEEEEEEEEEGG-------GSSEEECCCCCCSSCTTSCEEEEEEEEEEEEGGGEES
T ss_pred c-ccCEEEEEEEecCCCccc-CCCCCceEEEEEeCC-------CCCeEEecCccccCCCCCCeeEEEeccEEecHHHhcC
Confidence 9 999999999986422110 001238999999964 6999999999999999999999999999999999998
Q ss_pred cCCcccCCCccccCCcccchHHHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCcccccccHHHHHH
Q 048624 289 RFGDVSRDGKYTSSLPTINKRFAATLGELVGGRVGLAYSSVGVLKIAATIAIRYSLLRQQFGPPRKPEVSILDYQSQQHK 368 (673)
Q Consensus 289 ~~~~v~~~G~~~~~~~~~~~g~~~~~~~l~~~rl~~aa~~~G~a~~al~~a~~ya~~R~qfg~~~~~e~~i~~~q~vq~~ 368 (673)
. +++|+..++..++.+|+.+++.++|+++++++.+++|+++|+|||+| |+++|.+|++
T Consensus 277 ~----------------~g~G~~~~~~~l~~~Rl~~aa~~~G~a~~al~~a~~ya~~R~qfG~p------i~~~~~vq~~ 334 (607)
T 2uxw_A 277 E----------------VGSGFKVAMHILNNGRFGMAAALAGTMRGIIAKAVDHATNRTQFGEK------IHNFGLIQEK 334 (607)
T ss_dssp S----------------TTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEE------GGGSHHHHHH
T ss_pred C----------------CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCc------hhhcHHHHHH
Confidence 6 56788889999999999999999999999999999999999999998 9999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchhhhHHHHHHhHHHHHHHHHHHHHHHHHHHhCccCccCccchhccccc
Q 048624 369 LMPMLASTYAFHFATANLVEKYSEMKKTHDEQLVGDVHALSAGLKSYVTSYTAKSLSVCREACGGHGYAAVNRFGSLRND 448 (673)
Q Consensus 369 La~~~a~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~K~~at~~a~~~~~~~~q~~Gg~Gy~~~~~l~r~~rd 448 (673)
|++|.+.+++++++. +..++..|.+. .+....++++|+++++.+.+++++|+|+|||+||+.+++++++|||
T Consensus 335 La~~~~~~eaaral~----~~aa~~~d~~~----~~~~~~~~~aK~~~se~a~~v~~~a~qv~GG~G~~~e~~l~r~~Rd 406 (607)
T 2uxw_A 335 LARMVMLQYVTESMA----YMVSANMDQGA----TDFQIEAAISKIFGSEAAWKVTDECIQIMGGMGFMKEPGVERVLRD 406 (607)
T ss_dssp HHHHHHHHHHHHHHH----HHHHHHHHTTC----SCCHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHSSTTSHHHHHHH
T ss_pred HHHHHHHHHHHHHHH----HHHHHHhhcCC----ccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCccHHHHHHHh
Confidence 999999999976554 33444445432 3456788999999999999999999999999999999999999999
Q ss_pred cccccccCccHHHHHHHHHHHHHHH
Q 048624 449 HDIFQTFEGDNTVLLQQVAGDLLKQ 473 (673)
Q Consensus 449 ~~~~~~~eG~~~vl~~~ia~~ll~~ 473 (673)
+++..++||+|++++..++...+..
T Consensus 407 a~~~~i~eGt~~i~~~~ia~~glq~ 431 (607)
T 2uxw_A 407 LRIFRIFEGTNDILRLFVALQGCMD 431 (607)
T ss_dssp HGGGGTSSSCHHHHHHHHHHHHHHH
T ss_pred cccceeeCChHHHHHHHHHHHHHHH
Confidence 9999999999999999998776643
No 26
>2wbi_A Acyl-COA dehydrogenase family member 11; human, phosphoprotein, oxidoreducta; HET: FAD; 2.80A {Homo sapiens}
Probab=100.00 E-value=2e-56 Score=490.90 Aligned_cols=385 Identities=17% Similarity=0.219 Sum_probs=319.1
Q ss_pred chHhhhhhcCCCHHHHHH-HHHHHhcCCCCCCCccC---CHHHH----H-H----HHHHHHHHHHHHcCCCCcccc---C
Q 048624 41 LCAVIWLYERKAQGDTRE-SVEYFNSRPDLQTPVEI---LKDDH----R-E----LCWRQLLGLVREAGIKPFKYV---A 104 (673)
Q Consensus 41 ~~~~m~~~l~~e~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~----~-~----~~~~~~~~~l~e~Gl~~~~~p---~ 104 (673)
+...|+|.+++|++++++ +++|+.++. .+ ... .+++. . . ..++++|+.+.+.||+++.+| +
T Consensus 15 ~~~~m~~~~~~e~~~l~~~~r~f~~~~~-~p--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~l~~P~G~g 91 (428)
T 2wbi_A 15 DTTGQLFVQTRKGQEVLIKVKHFMKQHI-LP--AEKEVTEFYVQNENSVDKWGKPLVIDKLKEMAKVEGLWNLFLPAVSG 91 (428)
T ss_dssp -------CCCHHHHHHHHHHHHHHHHTH-HH--HHHHHHC----------CCSCCHHHHHHHHHHHHTTCCSTTCHHHHC
T ss_pred CCccCCCCCCHHHHHHHHHHHHHHHhhC-Cc--hhcchhHHhhhccccccccCCcccHHHHHHHHHHCCCCeecCCCCCC
Confidence 344699999999999998 777877652 11 111 11111 1 1 245889999999999999999 4
Q ss_pred CCHHHHHHHHHHHhccchh-hHHHHHHhHhhHHHHHhccCChhhHHhHHhhhhcCCcceeeeccCCC-CCCCcCCceeEE
Q 048624 105 EDPAQYFAIAEAVGSVDMS-LGIKMGVQYSLWGGSVINLGTKKHRDKYYDGIDNLDYPGCFAMTELH-HGSNVQGLQTVA 182 (673)
Q Consensus 105 ~~~~~~~~~~e~la~~~~s-~~~~~~~h~~l~~~~i~~~gt~eq~~~~l~~i~~g~~~g~~a~TE~~-~Gsd~~~~~TtA 182 (673)
.++.+...+.|++++.+.+ .++....+..++...|..+|+++|+++|||++.+|++++|+++|||+ +|||+.+++|+|
T Consensus 92 ~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~qk~~~l~~l~~G~~~~~~a~tEp~~aGsd~~~~~t~A 171 (428)
T 2wbi_A 92 LSHVDYALIAEETGKCFFAPDVFNCQAPDTGNMEVLHLYGSEEQKKQWLEPLLQGNITSCFCMTEPDVASSDATNIECSI 171 (428)
T ss_dssp CCHHHHHHHHHHHTTSTTHHHHTTCCTTHHHHHHHHHHHCCHHHHHHTHHHHHHTSSEEEEECCCTTSCTTSGGGCCCEE
T ss_pred CCHHHHHHHHHHHHhhcchhhhHhhhccchhHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEEecCCcCCCCcccceEEE
Confidence 5889999999999998743 22221222224566888899999999999999999999999999999 999999999999
Q ss_pred EEcCCCCEEEEecCCCCceeeeccCcccc--CcEEEEEEEEecCCCCCCCCCCCceEEEEEeecCCCCCCCCCCeEEecC
Q 048624 183 TFDPIKDEFIINTPNDGAIKWWIGNAAVH--GKFATVFAKLMLPTHDSKGYSDMGVHAFIVPIRDMKTHQTLPGIEIHDC 260 (673)
Q Consensus 183 ~~d~~~~~~vLntP~~~G~K~~i~~~~~~--A~~~vV~Ar~~~~g~~~~~~~~~g~~~FlV~~rd~~~~~~~pGv~v~~~ 260 (673)
+++ +|+|+|| |+|+||||+. . |||++|+|+++.++.+ +++|+++|+||.+ .|||++.+.
T Consensus 172 ~~~--~~g~~ln-----G~K~~is~a~-~~~Ad~~~v~art~~~~~~----~~~g~~~flV~~~-------~pGv~v~~~ 232 (428)
T 2wbi_A 172 QRD--EDSYVIN-----GKKWWSSGAG-NPKCKIAIVLGRTQNTSLS----RHKQHSMILVPMN-------TPGVKIIRP 232 (428)
T ss_dssp EEE--TTEEEEE-----EEEEEEETTT-STTEEEEEEEEECCCTTSC----GGGCEEEEEEETT-------STTEEEEEE
T ss_pred EEe--CCEEEEE-----eEEeccCCCC-CCcCCEEEEEEEeCCccCC----CCCceEEEEEECC-------CCcEEecCC
Confidence 998 8999999 9999999998 7 9999999998643201 1237999999964 699999999
Q ss_pred CCCccCCCCC---ceeEEecceecCcccccccCCcccCCCccccCCcccchHHHHHHhhHhHHHHHHHHHHHHHHHHHHH
Q 048624 261 GHKVGLNGVD---NGALRFCSVRIPRDNLLNRFGDVSRDGKYTSSLPTINKRFAATLGELVGGRVGLAYSSVGVLKIAAT 337 (673)
Q Consensus 261 ~~~~G~~~~~---~~~l~fd~v~VP~~~lL~~~~~v~~~G~~~~~~~~~~~g~~~~~~~l~~~rl~~aa~~~G~a~~al~ 337 (673)
|+++|+++++ ++.|.||||+||.+++||. ++.|+......+..+|+.+++.++|+++++++
T Consensus 233 ~~~~G~~~~~~~~~~~v~fddv~VP~~~~lg~----------------~g~g~~~~~~~l~~~r~~~aa~~~G~a~~al~ 296 (428)
T 2wbi_A 233 LSVFGYTDNFHGGHFEIHFNQVRVPATNLILG----------------EGRGFEISQGRLGPGRIHHCMRTVGLAERALQ 296 (428)
T ss_dssp CCBTTBCCGGGCCEEEEEEEEEEEEGGGBCSC----------------TTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCccccCCCCCCCeEEEEeCceEECHHHhcCC----------------ccchHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 9999999995 9999999999999999985 45678888888999999999999999999999
Q ss_pred HHHHHhhhccccCCCCCCcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCcchhhhHHHHHHhHHHHH
Q 048624 338 IAIRYSLLRQQFGPPRKPEVSILDYQSQQHKLMPMLASTYAFHFATANLVEKYSEMKKT-HDEQLVGDVHALSAGLKSYV 416 (673)
Q Consensus 338 ~a~~ya~~R~qfg~~~~~e~~i~~~q~vq~~La~~~a~~~a~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~K~~a 416 (673)
.+++|+++|+|||+| |+++|.+|++|++|.+.+++++++. +.+++..+. +. .+....++++|+++
T Consensus 297 ~a~~ya~~R~~fG~~------i~~~q~vq~~la~~~~~~~aar~~~----~~aa~~~d~~g~----~~~~~~~~~aK~~a 362 (428)
T 2wbi_A 297 IMCERATQRIAFKKK------LYAHEVVAHWIAESRIAIEKIRLLT----LKAAHSMDTLGS----AGAKKEIAMIKVAA 362 (428)
T ss_dssp HHHHHHHHCEETTEE------GGGSHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHH----HHTHHHHHHHHHHH
T ss_pred HHHHHHhhCcccCCC------hhhhHHHHHHHHHHHHHHHHHHHHH----HHHHHHHhccCC----cchHHHHHHHHHHH
Confidence 999999999999999 9999999999999999999966554 444444443 11 34567889999999
Q ss_pred HHHHHHHHHHHHHHhCccCccCccchhccccccccccccCccHHHHHHHHHHHHHHHHHHH
Q 048624 417 TSYTAKSLSVCREACGGHGYAAVNRFGSLRNDHDIFQTFEGDNTVLLQQVAGDLLKQYKEK 477 (673)
Q Consensus 417 t~~a~~~~~~~~q~~Gg~Gy~~~~~l~r~~rd~~~~~~~eG~~~vl~~~ia~~ll~~~~~~ 477 (673)
++.+.++++.|+|+|||+||+.+++++++|||++...+++|++++++..+++.+|+.|++.
T Consensus 363 ~e~a~~v~~~a~q~~Gg~G~~~~~~~~r~~Rda~~~~i~~G~~~~~~~~ia~~~l~~~~~~ 423 (428)
T 2wbi_A 363 PRAVSKIVDWAIQVCGGAGVSQDYPLANMYAITRVLRLADGPDEVHLSAIATMELRDQAKR 423 (428)
T ss_dssp HHHHHHHHHHHHHHTGGGGGSTTSSHHHHHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCcccCCCCcHHHHHHHHhhcEecCChHHHHHHHHHHHHHHHhhhh
Confidence 9999999999999999999999999999999999999999999999999999999987654
No 27
>1siq_A GCD, glutaryl-COA dehydrogenase; acyl-COA dehydrogenase, decarboxylation, flavin protein, oxidoreductase; HET: FAD; 2.10A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1 PDB: 2r0n_A* 1sir_A* 2r0m_A*
Probab=100.00 E-value=4.6e-56 Score=482.90 Aligned_cols=370 Identities=21% Similarity=0.298 Sum_probs=321.9
Q ss_pred HhhhhhcCCCHHHHHH-HHHHHhcCCCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCCccccCC------CHHHHHHHHH
Q 048624 43 AVIWLYERKAQGDTRE-SVEYFNSRPDLQTPVEILKDDHRELCWRQLLGLVREAGIKPFKYVAE------DPAQYFAIAE 115 (673)
Q Consensus 43 ~~m~~~l~~e~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~Gl~~~~~p~~------~~~~~~~~~e 115 (673)
..|+|.+++|++++++ +++++.++ + . +.....++... .++++|+.+.+.||+++.+ ++ ++.++..+.|
T Consensus 8 ~~m~~~~~~e~~~l~~~~r~~~~~~-~-~-~~~~~~~~~~~-~~~~~~~~l~~~Gl~~l~~-~~~GG~g~~~~~~~~~~e 82 (392)
T 1siq_A 8 LVLEEQLTTDEILIRDTFRTYCQER-L-M-PRILLANRNEV-FHREIISEMGELGVLGPTI-KGYGCAGVSSVAYGLLAR 82 (392)
T ss_dssp TCGGGGSCHHHHHHHHHHHHHHHHH-T-H-HHHHHHHHHTC-CCTHHHHHHHHTTCSSTTC-EETTEECCCHHHHHHHHH
T ss_pred cccCCCCCHHHHHHHHHHHHHHHHh-c-C-cchHHHHhhCC-CCHHHHHHHHhCCCCcccH-HhhCCCCCCHHHHHHHHH
Confidence 3489999999999988 77777654 2 1 11222233333 3478999999999999999 54 8899999999
Q ss_pred HHhccchhhHHHHHHhHhhHHHHHhccCChhhHHhHHhhhhcCCcceeeeccCCCCCCCcCCceeEEEEcCCCCEEEEec
Q 048624 116 AVGSVDMSLGIKMGVQYSLWGGSVINLGTKKHRDKYYDGIDNLDYPGCFAMTELHHGSNVQGLQTVATFDPIKDEFIINT 195 (673)
Q Consensus 116 ~la~~~~s~~~~~~~h~~l~~~~i~~~gt~eq~~~~l~~i~~g~~~g~~a~TE~~~Gsd~~~~~TtA~~d~~~~~~vLnt 195 (673)
++++.|+++++.+.+|..++...|..+|+++|+++|+|++.+|+.++|+++|||++|||+.+++|+|++++++|+|+||
T Consensus 83 el~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~l~~g~~~~~~a~tEp~~gsd~~~~~t~A~~~~~~~g~~ln- 161 (392)
T 1siq_A 83 ELERVDSGYRSAMSVQSSLVMHPIYAYGSEEQRQKYLPQLAKGELLGCFGLTEPNSGSDPSSMETRAHYNSSNKSYTLN- 161 (392)
T ss_dssp HHHTTCHHHHHHHHHHHHTTHHHHHHHSCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEETTTTEEEEE-
T ss_pred HHHHhCcHHHHHHHHHHhHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEECCCCCCcCccccEEEEEEeCCCCEEEEE-
Confidence 9999999988877777666678889999999999999999999999999999999999999999999998667899999
Q ss_pred CCCCceeeeccCccccCcEEEEEEEEecCCCCCCCCCCCceEEEEEeecCCCCCCCCCCeEEecCCCCccCCCCCceeEE
Q 048624 196 PNDGAIKWWIGNAAVHGKFATVFAKLMLPTHDSKGYSDMGVHAFIVPIRDMKTHQTLPGIEIHDCGHKVGLNGVDNGALR 275 (673)
Q Consensus 196 P~~~G~K~~i~~~~~~A~~~vV~Ar~~~~g~~~~~~~~~g~~~FlV~~rd~~~~~~~pGv~v~~~~~~~G~~~~~~~~l~ 275 (673)
|+|+|+||+. .|||++|+|++.. . ++++|+||.+ .|||++.+.|+++|+++++++.|.
T Consensus 162 ----G~K~~vs~~~-~Ad~~~v~a~~~~----g------~~~~flV~~~-------~pGv~v~~~~~~~G~~~~~~~~v~ 219 (392)
T 1siq_A 162 ----GTKTWITNSP-MADLFVVWARCED----G------CIRGFLLEKG-------MRGLSAPRIQGKFSLRASATGMII 219 (392)
T ss_dssp ----EEEEEEETGG-GCSEEEEEEEETT----S------CEEEEEEETT-------CTTEECCBCCCCSSSTTSCEEEEE
T ss_pred ----EEEEeecCCc-ccCEEEEEEEECC----C------CEEEEEEeCC-------CCCeEeccccccccccCCceEEEE
Confidence 9999999999 9999999999841 1 5889999964 599999999999999999999999
Q ss_pred ecceecCcccccccCCcccCCCccccCCcccchHHHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCC
Q 048624 276 FCSVRIPRDNLLNRFGDVSRDGKYTSSLPTINKRFAATLGELVGGRVGLAYSSVGVLKIAATIAIRYSLLRQQFGPPRKP 355 (673)
Q Consensus 276 fd~v~VP~~~lL~~~~~v~~~G~~~~~~~~~~~g~~~~~~~l~~~rl~~aa~~~G~a~~al~~a~~ya~~R~qfg~~~~~ 355 (673)
||||+||.+++|+.. .|+...+..+...|+.+++.++|+++++++.+++|+++|+|||+|
T Consensus 220 fd~v~Vp~~~~lg~~-----------------~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fG~~--- 279 (392)
T 1siq_A 220 MDGVEVPEENVLPGA-----------------SSLGGPFGCLNNARYGIAWGVLGASEFCLHTARQYALDRMQFGVP--- 279 (392)
T ss_dssp EEEEEEEGGGBCTTC-----------------CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEE---
T ss_pred EccEEECHHHcCCcc-----------------cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCeeCCcc---
Confidence 999999999999741 234456677888999999999999999999999999999999998
Q ss_pred cccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchhhhHHHHHHhHHHHHHHHHHHHHHHHHHHhCccC
Q 048624 356 EVSILDYQSQQHKLMPMLASTYAFHFATANLVEKYSEMKKTHDEQLVGDVHALSAGLKSYVTSYTAKSLSVCREACGGHG 435 (673)
Q Consensus 356 e~~i~~~q~vq~~La~~~a~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~K~~at~~a~~~~~~~~q~~Gg~G 435 (673)
|+++|.+|++|++|.+.+++++++ ++.+++..+.+ .+....++++|.++++.+.++++.|+|+|||+|
T Consensus 280 ---i~~~q~vq~~la~~~~~~~~ar~~----~~~aa~~~d~~-----~~~~~~~~~aK~~~~~~a~~v~~~a~q~~Gg~g 347 (392)
T 1siq_A 280 ---LARNQLIQKKLADMLTEITLGLHA----CLQLGRLKDQD-----KAAPEMVSLLKRNNCGKALDIARQARDMLGGNG 347 (392)
T ss_dssp ---GGGSHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHTT-----CCCHHHHHHHHHHHHHHHHHHHHHHHHHTGGGG
T ss_pred ---hhhhHHHHHHHHHHHHHHHHHHHH----HHHHHHHHhCC-----CcchHHHHHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 999999999999999999995544 45555555554 233456899999999999999999999999999
Q ss_pred ccCccchhccccccccccccCccHHHHHHHHHHHHHH
Q 048624 436 YAAVNRFGSLRNDHDIFQTFEGDNTVLLQQVAGDLLK 472 (673)
Q Consensus 436 y~~~~~l~r~~rd~~~~~~~eG~~~vl~~~ia~~ll~ 472 (673)
|+.+++++++|||+++..+++|++++++..+++.+++
T Consensus 348 ~~~~~~l~r~~Rd~~~~~~~~G~~~~~~~~i~~~llg 384 (392)
T 1siq_A 348 ISDEYHVIRHAMNLEAVNTYEGTHDIHALILGRAITG 384 (392)
T ss_dssp GSGGGSHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHS
T ss_pred ccCCCcHHHHHhhCcCCeeecCcHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999874
No 28
>3mpi_A Glutaryl-COA dehydrogenase; alpha-beta fold, oxidoreductase; HET: FAD GRA; 2.05A {Desulfococcus multivorans} PDB: 3mpj_A*
Probab=100.00 E-value=1.6e-56 Score=487.39 Aligned_cols=369 Identities=21% Similarity=0.291 Sum_probs=324.7
Q ss_pred hhhhcCCCHHHHHH-HHHHHhcCCCCCCCccCCHHHHHHHHH-HHHHHHHHHcCCCCccccCC--------CHHHHHHHH
Q 048624 45 IWLYERKAQGDTRE-SVEYFNSRPDLQTPVEILKDDHRELCW-RQLLGLVREAGIKPFKYVAE--------DPAQYFAIA 114 (673)
Q Consensus 45 m~~~l~~e~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~e~Gl~~~~~p~~--------~~~~~~~~~ 114 (673)
|+|.+++||+++++ +++++.++. . +.....++... ++ +++|+.+.+.||+++.+|++ ++.+.+.+.
T Consensus 1 M~~~~~~~~~~l~~~~r~~~~~~~--~-~~~~~~d~~~~-~~~~~~~~~l~~~Gl~~l~~P~~~GG~g~~~~~~~~~~v~ 76 (397)
T 3mpi_A 1 MDFNLSKELQMLQKEVRNFVNKKI--V-PFADQWDNENH-FPYEEAVRPMGELGFFGTVIPEEYGGEGMDQGWLAAMIVT 76 (397)
T ss_dssp CBCCCCHHHHHHHHHHHHHHHHHT--T-TTHHHHHHHTC-CCTTTTHHHHHHTTTTCTTSCGGGTSCCCTTHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhC--C-hhHHHHHhcCC-CCHHHHHHHHHHCCCCccCCChhhCCCCCCCCHHHHHHHH
Confidence 88999999999999 777776552 2 12223333333 45 78999999999999999965 568889999
Q ss_pred HHHhccchhhHHHHHHhHhhHHH-HHhccCChhhHHhHHhhhhcCCcceeeeccCCCCCCCcCCceeEEEEcCCCCEEEE
Q 048624 115 EAVGSVDMSLGIKMGVQYSLWGG-SVINLGTKKHRDKYYDGIDNLDYPGCFAMTELHHGSNVQGLQTVATFDPIKDEFII 193 (673)
Q Consensus 115 e~la~~~~s~~~~~~~h~~l~~~-~i~~~gt~eq~~~~l~~i~~g~~~g~~a~TE~~~Gsd~~~~~TtA~~d~~~~~~vL 193 (673)
|++++.|+++++.+.+| .++.. .|..+|+++|+++|||++.+|+.++|+++|||++|||+.+++|+|+++ +|+|+|
T Consensus 77 eela~~~~~~~~~~~~~-~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~gsd~~~~~t~A~~~--~~g~~l 153 (397)
T 3mpi_A 77 EEIARGSSALRVQLNME-VLGCAYTILTYGSEALKKKYVPKLSSAEFLGGFGITEPDAGSDVMAMSSTAEDK--GDHWLL 153 (397)
T ss_dssp HHHHHHCHHHHHHHHHH-TTTTHHHHHHHSCHHHHHHHHHHHHTTSSCCCEECCBTTBSSCGGGCCCEEEEC--SSEEEE
T ss_pred HHHHhhCchHHHHHHHH-HHhHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCCCcccCeEEEEEe--CCEEEE
Confidence 99999999999888887 45666 899999999999999999999999999999999999999999999998 899999
Q ss_pred ecCCCCceeeeccCccccCcEEEEEEEEecCCCCCCCCCCCceEEEEE-eecCCCCCCCCCCeEEecCCCCccCCCCCce
Q 048624 194 NTPNDGAIKWWIGNAAVHGKFATVFAKLMLPTHDSKGYSDMGVHAFIV-PIRDMKTHQTLPGIEIHDCGHKVGLNGVDNG 272 (673)
Q Consensus 194 ntP~~~G~K~~i~~~~~~A~~~vV~Ar~~~~g~~~~~~~~~g~~~FlV-~~rd~~~~~~~pGv~v~~~~~~~G~~~~~~~ 272 (673)
| |+|.|+||+. .|||++|+|++..+++. +|+.+|+| |.+ .|||++ +.|+++|+++++++
T Consensus 154 n-----G~K~~~s~~~-~Ad~~~v~a~~~~~~~~------~g~~~flV~~~~-------~~Gv~v-~~~~~~G~~~~~~~ 213 (397)
T 3mpi_A 154 N-----GSKTWISNAA-QADVLIYYAYTDKAAGS------RGLSAFVIEPRN-------FPGIKT-SNLEKLGSHASPTG 213 (397)
T ss_dssp E-----EEEEEEETTT-TCSSEEEEEESCGGGGG------GSEEEEEECTTT-------STTEEE-EECCCSSCTTSCEE
T ss_pred E-----EEEEeeCCCc-ccCEEEEEEEcCCCCCC------CceEEEEEEcCC-------CCCeEe-ccCccccCcCCcee
Confidence 9 9999999999 99999999998653322 38999999 854 699999 88999999999999
Q ss_pred eEEecceecCcccccccCCcccCCCccccCCcccchHHHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCC
Q 048624 273 ALRFCSVRIPRDNLLNRFGDVSRDGKYTSSLPTINKRFAATLGELVGGRVGLAYSSVGVLKIAATIAIRYSLLRQQFGPP 352 (673)
Q Consensus 273 ~l~fd~v~VP~~~lL~~~~~v~~~G~~~~~~~~~~~g~~~~~~~l~~~rl~~aa~~~G~a~~al~~a~~ya~~R~qfg~~ 352 (673)
.|.||||+||.+++||. ++.|+...+..+...|+.+++.++|+++++++.+++|+++|+|||+|
T Consensus 214 ~v~fddv~Vp~~~~lg~----------------~~~g~~~~~~~~~~~r~~~aa~~lG~a~~al~~a~~~a~~R~~fg~~ 277 (397)
T 3mpi_A 214 ELFLDNVKVPKENILGK----------------PGDGARIVFGSLNHTRLSAAAGGVGLAQACLDAAIKYCNERRQFGKP 277 (397)
T ss_dssp EEEEEEEEEEGGGEESS----------------TTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEE
T ss_pred EEEEeeEEECHHHcCCC----------------CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcccCCc
Confidence 99999999999999986 46778888899999999999999999999999999999999999999
Q ss_pred CCCcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchhhhHHHHHHhHHHHHHHHHHHHHHHHHHHhC
Q 048624 353 RKPEVSILDYQSQQHKLMPMLASTYAFHFATANLVEKYSEMKKTHDEQLVGDVHALSAGLKSYVTSYTAKSLSVCREACG 432 (673)
Q Consensus 353 ~~~e~~i~~~q~vq~~La~~~a~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~K~~at~~a~~~~~~~~q~~G 432 (673)
|+++|.+|++|++|.+.+++++++ ++.+++..+.+. .+....++++|.++++.+.++++.|+|+||
T Consensus 278 ------i~~~q~vq~~la~~~~~~~aar~~----~~~aa~~~~~~~----~~~~~~~~~aK~~a~~~a~~~~~~a~q~~G 343 (397)
T 3mpi_A 278 ------IGDFQMNQDMIAQMAVEVEAARLL----AYKAAAAKDEGR----LNNGLDVAMAKYAAGEAVSKCANYAMRILG 343 (397)
T ss_dssp ------GGGSHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHTTC----TEEHHHHHHHHHHHHHHHHHHHHHHHHHHG
T ss_pred ------hhhhHHHHHHHHHHHHHHHHHHHH----HHHHHHHHhCCC----CccHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999996544 455555555542 334567899999999999999999999999
Q ss_pred ccCccCccchhccccccccccccCccHHHHHHHHH-HHH
Q 048624 433 GHGYAAVNRFGSLRNDHDIFQTFEGDNTVLLQQVA-GDL 470 (673)
Q Consensus 433 g~Gy~~~~~l~r~~rd~~~~~~~eG~~~vl~~~ia-~~l 470 (673)
|.||+.+++++|+|||+++..+++|++++++..++ +.+
T Consensus 344 g~g~~~~~~~~r~~Rda~~~~i~~Gt~ei~~~~ia~~~l 382 (397)
T 3mpi_A 344 AYGYSTEYPVARFYRDAPTYYMVEGSANICKMIIALDQL 382 (397)
T ss_dssp GGGGSTTSHHHHHHHHTTHHHHSSSCHHHHHHHHHHHHH
T ss_pred CeeecCCCCHHHHHhhccceeeecCHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999 665
No 29
>3mkh_A Nitroalkane oxidase; oxidoreductase flavoenzyme, acyl-COA dehydrogen flavoprotein, oxidoreductase; HET: FAD; 2.00A {Podospora anserina}
Probab=100.00 E-value=1e-54 Score=479.29 Aligned_cols=390 Identities=17% Similarity=0.162 Sum_probs=322.2
Q ss_pred hhhhcCCCHHHHHH-HHHHHhcCCCCCCC--ccCCHHHHHHHHH--HHHHHHHHHcCCCCccccCC------CHHHHHHH
Q 048624 45 IWLYERKAQGDTRE-SVEYFNSRPDLQTP--VEILKDDHRELCW--RQLLGLVREAGIKPFKYVAE------DPAQYFAI 113 (673)
Q Consensus 45 m~~~l~~e~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~--~~~~~~l~e~Gl~~~~~p~~------~~~~~~~~ 113 (673)
|+|.+++||+++++ +++|+.++.. +.. .+...++....++ +++|+.+.+.||+++.+|++ ++.+++.+
T Consensus 3 m~~~~~~e~~~l~~~~r~f~~~~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v 81 (438)
T 3mkh_A 3 IDFHLSASQKGTYQAARSLARNLLM-PARQTYLQHPPNSPLRFQSTQPTYAAAVSAGILKGQISPAHGGTGGTLIESAIL 81 (438)
T ss_dssp CBCCCCHHHHHHHHHHHHHHHHTHH-HHHHHHTTSCTTCHHHHHTTHHHHHHHHHTTTTGGGSCGGGTCCCCCHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhcC-cHHHHHhhccccccCcCCCcHHHHHHHHhCCCCCCCCCcccCCCCCCHHHHHHH
Confidence 79999999999999 7777776621 110 1111111110233 78999999999999999975 89999999
Q ss_pred HHHHhccchhhHHHHHHhHhhHHHHHhccCChhhHHhHHhhhhcC--CcceeeeccCCCCCC-----CcCCceeEEEEcC
Q 048624 114 AEAVGSVDMSLGIKMGVQYSLWGGSVINLGTKKHRDKYYDGIDNL--DYPGCFAMTELHHGS-----NVQGLQTVATFDP 186 (673)
Q Consensus 114 ~e~la~~~~s~~~~~~~h~~l~~~~i~~~gt~eq~~~~l~~i~~g--~~~g~~a~TE~~~Gs-----d~~~~~TtA~~d~ 186 (673)
+|++++.|+++++.+..| .++...|..+|+++ +++|||++.+| +.++|+++|||++|| |+.+++|+|+++
T Consensus 82 ~eela~~~~~~~~~~~~~-~~~~~~l~~~g~~~-~~~~l~~~~~G~g~~~~~~a~tEp~~gs~~~~sd~~~~~t~A~~~- 158 (438)
T 3mkh_A 82 VEECYSVEPSAALTIFAT-GLGLTPINLAAGPQ-HAEFLAPFLSGEGSPLASLVFSEPGGVANALEKGAPGFQTTARLE- 158 (438)
T ss_dssp HHHHHHHCHHHHHHHHHH-HHHHHHHHHHCCGG-GHHHHGGGSSSCSCCCEEEECCCTTCCTTTTCTTSCCCSCEEEEE-
T ss_pred HHHHHhhChhHHHHHHHh-hHHHHHHHhhCCHH-HHHHHHHHhcCCCCceEEEEEccCCCCCCccccccccceeEEEEe-
Confidence 999999999988776554 45667788899999 88999999996 589999999999998 689999999998
Q ss_pred CCCEEEEecCCCCceeeeccCcc----ccCcEEEEEEEEecCCCCCCCCCCCceEEEEEeecCCCCCCCCCC-eEEecCC
Q 048624 187 IKDEFIINTPNDGAIKWWIGNAA----VHGKFATVFAKLMLPTHDSKGYSDMGVHAFIVPIRDMKTHQTLPG-IEIHDCG 261 (673)
Q Consensus 187 ~~~~~vLntP~~~G~K~~i~~~~----~~A~~~vV~Ar~~~~g~~~~~~~~~g~~~FlV~~rd~~~~~~~pG-v~v~~~~ 261 (673)
+|+|+|| |+|+||||+. ..||+++|+|++.....+....++.|+++|+||.++.+. ..|| |++.+.|
T Consensus 159 -g~g~~ln-----G~K~~is~a~~~~~~~Ad~~~v~a~~~~~~~~~~~~~~~g~~~flV~~~~~~~--~~pG~v~v~~~~ 230 (438)
T 3mkh_A 159 -GDEWVIN-----GEKMWATNCAGWDFKGCDLACVVCRDATTPLEEGQDPENKVMIILVTRADLDR--NGEGSFEVLRHV 230 (438)
T ss_dssp -TTEEEEE-----EEECSCTTTTCTTSSCCSEEEEEEEECSSCCCTTCCGGGGEEEEEEEHHHHHH--HCTTSEEEEECC
T ss_pred -CCEEEEE-----eEEEEecCCCccccccCcEEEEEEEecCcccCcccCCCCceEEEEEecCcccc--CCCCcEEecCcC
Confidence 8999999 9999999986 269999999998631000000112489999999642000 0288 9999999
Q ss_pred CCccCCCCCceeEEecceecCcccccccCCcccCCCccccCCcccchHHHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHH
Q 048624 262 HKVGLNGVDNGALRFCSVRIPRDNLLNRFGDVSRDGKYTSSLPTINKRFAATLGELVGGRVGLAYSSVGVLKIAATIAIR 341 (673)
Q Consensus 262 ~~~G~~~~~~~~l~fd~v~VP~~~lL~~~~~v~~~G~~~~~~~~~~~g~~~~~~~l~~~rl~~aa~~~G~a~~al~~a~~ 341 (673)
+++|+++++++.|.||||+||++++||. ++.|+..++..+..+|+.+++.++|+++++++.+++
T Consensus 231 ~~~G~r~~~~~~v~fddv~VP~~~~lg~----------------~~~g~~~~~~~l~~~r~~~aa~~lG~a~~al~~a~~ 294 (438)
T 3mkh_A 231 ATPGHTSVSGPHVRYTNVRVPTKNVLCP----------------AGQGAKVAFGAFDGSAVLVGAMGVGLMRAAFDAALK 294 (438)
T ss_dssp CCSSCTTCCCCEEEEEEEEEEGGGEEEC----------------TTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcCCcCCCceEEEECcEEECHHHcCCC----------------CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999986 467888889999999999999999999999999999
Q ss_pred HhhhccccC-CCCCCcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchhhhHHHHHHhHHHHHHHHH
Q 048624 342 YSLLRQQFG-PPRKPEVSILDYQSQQHKLMPMLASTYAFHFATANLVEKYSEMKKTHDEQLVGDVHALSAGLKSYVTSYT 420 (673)
Q Consensus 342 ya~~R~qfg-~~~~~e~~i~~~q~vq~~La~~~a~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~K~~at~~a 420 (673)
|+++|+||| +| |++||.+|++|++|.+.+++++++ ++.+++..+.+... .......++++|+++++.+
T Consensus 295 ya~~R~~~g~~p------i~~~q~vq~~la~~~~~~~aar~~----~~~aa~~~d~~~~~-~~~~~~~~~~aK~~a~e~a 363 (438)
T 3mkh_A 295 FAKEDNRGGAVP------LLERQAFADLLSGVKIQTEAARAL----TWKAAHAMENGPGD-YDARRELALAAKVFCSEAA 363 (438)
T ss_dssp HHHHCCTTCSSC------GGGSHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHCSSC-HHHHHHHHHHHHHHHHHHH
T ss_pred HHhhcEeCCCee------ccccHHHHHHHHHHHHHHHHHHHH----HHHHHHHHhCCCCc-chhHHHHHHHHHHHHHHHH
Confidence 999999999 78 999999999999999999996554 45555555544210 0123345778999999999
Q ss_pred HHHHHHHHHHhCccCccCccchhccccccccccccCccH-HHHHHHHHHHHHHH
Q 048624 421 AKSLSVCREACGGHGYAAVNRFGSLRNDHDIFQTFEGDN-TVLLQQVAGDLLKQ 473 (673)
Q Consensus 421 ~~~~~~~~q~~Gg~Gy~~~~~l~r~~rd~~~~~~~eG~~-~vl~~~ia~~ll~~ 473 (673)
.++++.|+|+|||+||+.+++++|+|||+++..+++|++ ++++.++++.+|+.
T Consensus 364 ~~~~~~a~q~~Gg~G~~~~~~l~r~~Rda~~~~i~~Gt~~~v~~~~i~r~ll~~ 417 (438)
T 3mkh_A 364 VKACTDVINAVGISAYDLQRPFSDLLNTAVVLPIFDGGNVGIRRRHLQQLMLKP 417 (438)
T ss_dssp HHHHHHHHHHHGGGGGCTTSSHHHHHHHHTHHHHSSSCTTTTHHHHHHHHHHST
T ss_pred HHHHHHHHHHhchhhccCCCcHHHHHHHhheeeeecCChHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999 99999999999964
No 30
>1r2j_A Protein FKBI; polyketide synthase, polyketide, acyl-COA dehydrogenase, , aldehyde dehydrogenase, oxidoreductase; HET: FAD; 2.10A {Streptomyces hygroscopicus} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=3.3e-55 Score=471.74 Aligned_cols=332 Identities=19% Similarity=0.218 Sum_probs=294.5
Q ss_pred HHHHHHHHHHHcCCCCccccCC------CHHHHHHHHHHHhccchhhHHHHHHhHhhHHHHHhccCChhhHHhHHhhhhc
Q 048624 84 CWRQLLGLVREAGIKPFKYVAE------DPAQYFAIAEAVGSVDMSLGIKMGVQYSLWGGSVINLGTKKHRDKYYDGIDN 157 (673)
Q Consensus 84 ~~~~~~~~l~e~Gl~~~~~p~~------~~~~~~~~~e~la~~~~s~~~~~~~h~~l~~~~i~~~gt~eq~~~~l~~i~~ 157 (673)
+++++|+.+.+.||+++.+|++ ++.+...++|++++.|+++++.+.+|..++...|. +|+++|+++|||++.+
T Consensus 25 ~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~l~-~g~~~q~~~~l~~~~~ 103 (366)
T 1r2j_A 25 LPRDLLVRLGADGLLCAEVAAEHGGLGLGSRENGEFTAHVGSLCSSLRSVMTSQGMAAWTVQR-LGDAGQRATFLKELTS 103 (366)
T ss_dssp CCHHHHHHHHHTTTTSTTSCGGGTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH-HSCHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHCCCCCCCCChhhCCCCCCHHHHHHHHHHHHHHChHHHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHhC
Confidence 3588999999999999999965 88999999999999999999888887656778888 9999999999999999
Q ss_pred CCcceeeeccCCCCCCCcCCceeEEEEcCCCCEEEEecCCCCceeeeccCccccCcEEEEEEEEecCCCCCCCCCCCceE
Q 048624 158 LDYPGCFAMTELHHGSNVQGLQTVATFDPIKDEFIINTPNDGAIKWWIGNAAVHGKFATVFAKLMLPTHDSKGYSDMGVH 237 (673)
Q Consensus 158 g~~~g~~a~TE~~~Gsd~~~~~TtA~~d~~~~~~vLntP~~~G~K~~i~~~~~~A~~~vV~Ar~~~~g~~~~~~~~~g~~ 237 (673)
|+ ++|+++|||++|||+.+++|+|+++ +|+|+|| |+|+|+|++. .|||++|+|+++. . |++
T Consensus 104 G~-~~~~a~tEp~~Gsd~~~~~t~A~~~--~~g~~ln-----G~K~~~s~~~-~Ad~~~v~a~~~~----~------g~~ 164 (366)
T 1r2j_A 104 GK-LAAVGFSERQAGSDLSAMRTRVRLD--GDTAVVD-----GHKVWTTAAA-YADHLVVFGLQED----G------SGA 164 (366)
T ss_dssp C--CEEEECCBTTBSSCGGGCCCEEEEE--TTEEEEE-----EEEEEETTTT-TCSEEEEEEBCSS----S------CCE
T ss_pred CC-eeEEEeCCCCCCCchhhCEeEEEEe--CCEEEEE-----EEEecccCCc-ccCEEEEEEEeCC----C------ceE
Confidence 99 9999999999999999999999998 8999999 9999999999 9999999999742 1 689
Q ss_pred EEEEeecCCCCCCCCCCeEEecCCCCccCCCCCceeEEecceecCcccccccCCcccCCCccccCCcccchHHHHH-Hhh
Q 048624 238 AFIVPIRDMKTHQTLPGIEIHDCGHKVGLNGVDNGALRFCSVRIPRDNLLNRFGDVSRDGKYTSSLPTINKRFAAT-LGE 316 (673)
Q Consensus 238 ~FlV~~rd~~~~~~~pGv~v~~~~~~~G~~~~~~~~l~fd~v~VP~~~lL~~~~~v~~~G~~~~~~~~~~~g~~~~-~~~ 316 (673)
+|+||.+ .|||++.+.|+++|+++++++.|.||||+||.+++||. +++|+... +..
T Consensus 165 ~flV~~~-------~~Gv~~~~~~~~~G~r~~~~~~v~f~~v~Vp~~~~lg~----------------~~~g~~~~~~~~ 221 (366)
T 1r2j_A 165 VVVVPAD-------TPGVRVERVPKPSGCRAAGHADLHLDQVRVPAGAVLAG----------------SGASLPMLVAAS 221 (366)
T ss_dssp EEEEETT-------STTEEEEECSSCSSSTTSCCEEEEEEEEEEEGGGBCTT----------------TTSCTTTTTHHH
T ss_pred EEEEECC-------CCCeEecCCcCCccCCCCCeeEEEEeeEEEcHHHcCCC----------------CCccHHHHHHHH
Confidence 9999964 69999999999999999999999999999999999975 23455566 677
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 048624 317 LVGGRVGLAYSSVGVLKIAATIAIRYSLLRQQFGPPRKPEVSILDYQSQQHKLMPMLASTYAFHFATANLVEKYSEMKKT 396 (673)
Q Consensus 317 l~~~rl~~aa~~~G~a~~al~~a~~ya~~R~qfg~~~~~e~~i~~~q~vq~~La~~~a~~~a~~~~~~~l~~~~~~~~~~ 396 (673)
+..+|+.+++.++|+++++++.+++|+++|+|||+| |+++|.+|++|++|.+.+++++++ ++.+++..+.
T Consensus 222 l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~~------i~~~q~v~~~la~~~~~~~~ar~~----~~~aa~~~~~ 291 (366)
T 1r2j_A 222 LAYGRKSVAWGCVGILRACRTAAVAHARTREQFGRP------LGDHQLVAGHIADLWTAEQIAARV----CEYASDHWDE 291 (366)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEETTEE------GGGSHHHHHHHHHHHHHHHHHHHH----HHHHHHC---
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCCc------hhhhHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHC
Confidence 889999999999999999999999999999999999 999999999999999999995544 4555555554
Q ss_pred CCcchhhhHHHHHHhHHHHHHHHHHHHHHHHHHHhCccCccCccchhccccccccccccCccHHHHHHHHHHHHHH
Q 048624 397 HDEQLVGDVHALSAGLKSYVTSYTAKSLSVCREACGGHGYAAVNRFGSLRNDHDIFQTFEGDNTVLLQQVAGDLLK 472 (673)
Q Consensus 397 ~~~~~~~~~~~~~~~~K~~at~~a~~~~~~~~q~~Gg~Gy~~~~~l~r~~rd~~~~~~~eG~~~vl~~~ia~~ll~ 472 (673)
+. .+....++++|.++++.+.++++.|+|+|||.||+++++++++|||++...+++|++++++..+++.+++
T Consensus 292 g~----~~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~~~~~~r~~Rda~~~~~~~G~~~~~~~~ia~~~lg 363 (366)
T 1r2j_A 292 GS----PEMVPATILAKHVAAERAAAGAATAAQVLASAGAREGHVVERAYRDAKLMEIIEGSSEMCRVMLAQHALA 363 (366)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGC--CCHHHHHHHHHHHHHHSSSCHHHHHHHHHHHHTT
T ss_pred CC----CcchHHHHHHHHHHHHHHHHHHHHHHHhhCCeeecCCCcHHHHHHhccCceecCCHHHHHHHHHHHHHhc
Confidence 31 2234578999999999999999999999999999999999999999999999999999999999998874
No 31
>2c12_A Nitroalkane oxidase; oxidoreductase, flavoenzyme, acyl-COA dehydrogenase, long cell EDGE, FAD, inhibitor, flavoprotein; HET: SPM FAD PE4; 2.07A {Fusarium oxysporum} SCOP: a.29.3.1 e.6.1.1 PDB: 2c0u_A* 2zaf_A* 2reh_A* 3d9g_A* 3d9f_A* 3d9d_A* 3d9e_A* 3fcj_A*
Probab=100.00 E-value=6.2e-53 Score=465.01 Aligned_cols=388 Identities=16% Similarity=0.123 Sum_probs=319.1
Q ss_pred hhhhcCCCHHHHHH-HHHHHhcCCCCCCC--ccCCHHHHHHHHH--HHHHHHHHHcCCCCccccCC------CHHHHHHH
Q 048624 45 IWLYERKAQGDTRE-SVEYFNSRPDLQTP--VEILKDDHRELCW--RQLLGLVREAGIKPFKYVAE------DPAQYFAI 113 (673)
Q Consensus 45 m~~~l~~e~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~--~~~~~~l~e~Gl~~~~~p~~------~~~~~~~~ 113 (673)
|+|.+++|++++++ +++|+.++. .+.. .+...+.. ..++ +++|+.+.+.||+++.+|++ ++.+.+.+
T Consensus 2 M~~~~~~e~~~l~~~~r~f~~~~~-~p~~~~~d~~~~~~-~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v 79 (439)
T 2c12_A 2 VDFKLSPSQLEARRHAQAFANTVL-TKASAEYSTQKDQL-SRFQATRPFYREAVRHGLIKAQVPIPLGGTMESLVHESII 79 (439)
T ss_dssp CBCCCCHHHHHHHHHHHHHHHHTG-GGHHHHHTTCSSHH-HHHHTTHHHHHHHHHTTTTGGGSBGGGTCCBCCHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhC-ChhHHHHhhccccc-CCCCChHHHHHHHHHCCCCCCCCChhhCCCCCCHHHHHHH
Confidence 88999999999998 777776652 1110 01111111 2233 78999999999999999965 88999999
Q ss_pred HHHHhccchhhHHHHHHhHhhHHHHHhccCChhhHHhHHhhhh--cCCcceeeeccCCCCCC-----CcCCceeEEEEcC
Q 048624 114 AEAVGSVDMSLGIKMGVQYSLWGGSVINLGTKKHRDKYYDGID--NLDYPGCFAMTELHHGS-----NVQGLQTVATFDP 186 (673)
Q Consensus 114 ~e~la~~~~s~~~~~~~h~~l~~~~i~~~gt~eq~~~~l~~i~--~g~~~g~~a~TE~~~Gs-----d~~~~~TtA~~d~ 186 (673)
+|++++.|+++++.+.+| .++...|..+|+++|+++|||++. +|++++|+++|||++|| |+.+++|+|+++
T Consensus 80 ~eela~~~~~~~~~~~~~-~~~~~~l~~~g~~~q~~~~l~~~~~~~G~~~~~~a~tEp~~Gs~~~~sd~~~~~t~A~~~- 157 (439)
T 2c12_A 80 LEELFAVEPATSITIVAT-ALGLMPVILCDSPSLQEKFLKPFISGEGEPLASLMHSEPNGTANWLQKGGPGLQTTARKV- 157 (439)
T ss_dssp HHHHHTTCCTTHHHHHHH-HHHHHHHHHSSCHHHHHHHTGGGGSSCSCCCEEEECCCTTCSTTTTCTTSCCCSCEEEEE-
T ss_pred HHHHHhhChHHHHHHHHh-HHHHHHHHHhCCHHHHHHHHHHHhhcCCCEEEEEEecCCCCCCCccccccccceeEEEEc-
Confidence 999999999999887776 356778899999999999999999 69999999999999998 588899999998
Q ss_pred CCCEEEEecCCCCceeeeccCcc----ccCcEEEEEEEE-ec---CCCCCCCCCCCceEEEEEeecCCCCCCCCCCeEEe
Q 048624 187 IKDEFIINTPNDGAIKWWIGNAA----VHGKFATVFAKL-ML---PTHDSKGYSDMGVHAFIVPIRDMKTHQTLPGIEIH 258 (673)
Q Consensus 187 ~~~~~vLntP~~~G~K~~i~~~~----~~A~~~vV~Ar~-~~---~g~~~~~~~~~g~~~FlV~~rd~~~~~~~pGv~v~ 258 (673)
+|+|+|| |+|+||||++ ..||+++|+|++ .. ++.. ...+++|+++|+||.++ .+.++.+||++.
T Consensus 158 -~~g~~ln-----G~K~~is~~~~~~~~~Ad~~~v~ar~~~~~~~~~~~-~~~~~~g~~~flV~~~~-pGv~~~~Gv~v~ 229 (439)
T 2c12_A 158 -GNEWVIS-----GEKLWPSNSGGWDYKGADLACVVCRVSDDPSKPQDP-NVDPATQIAVLLVTRET-IANNKKDAYQIL 229 (439)
T ss_dssp -TTEEEEE-----EEEECCTTTTTTTSSCCSEEEEEEEECSCTTSCCCT-TSCGGGGEEEEEECHHH-HHTSCGGGEEEE
T ss_pred -CCEEEEE-----eEEEeecCCCccccccCcEEEEEEEcCCcccCcccc-ccCCCCceEEEEEECCC-CcccCCCceEeC
Confidence 8999999 9999999985 379999999998 51 1100 00012389999999753 111111289999
Q ss_pred cCCCCccCCCCCceeEEecceecCcccccccCCcccCCCccccCCcccchHHH-HHHhhHhHHHHHHHHHHHHHHHHHHH
Q 048624 259 DCGHKVGLNGVDNGALRFCSVRIPRDNLLNRFGDVSRDGKYTSSLPTINKRFA-ATLGELVGGRVGLAYSSVGVLKIAAT 337 (673)
Q Consensus 259 ~~~~~~G~~~~~~~~l~fd~v~VP~~~lL~~~~~v~~~G~~~~~~~~~~~g~~-~~~~~l~~~rl~~aa~~~G~a~~al~ 337 (673)
+.|+++|+++++++.|.||||+||.+++||. ++.|+. .....+..+|+.+++.++|+++++++
T Consensus 230 ~~~~~~G~r~~~~~~v~fddv~VP~~~~lg~----------------~~~g~~~~~~~~l~~~r~~~aa~~~G~a~~al~ 293 (439)
T 2c12_A 230 GEPELAGHITTSGPHTRFTEFHVPHENLLCT----------------PGLKAQGLVETAFAMSAALVGAMAIGTARAAFE 293 (439)
T ss_dssp ECCCBSSCTTCCCCEEEEEEEEEEGGGBCSC----------------TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcccccccCCCCceEEEEccEEecHHHcCCC----------------CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999975 467888 78888999999999999999999999
Q ss_pred HHHHHhhh-ccccCCCCCCcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchhhhHHHHHHhHHHHH
Q 048624 338 IAIRYSLL-RQQFGPPRKPEVSILDYQSQQHKLMPMLASTYAFHFATANLVEKYSEMKKTHDEQLVGDVHALSAGLKSYV 416 (673)
Q Consensus 338 ~a~~ya~~-R~qfg~~~~~e~~i~~~q~vq~~La~~~a~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~K~~a 416 (673)
.+++|+++ |+|||+| |+++|.+|++|++|.+.+++++++ ++.+++..+.+.... ......++++|.++
T Consensus 294 ~a~~ya~~rr~~~G~~------i~~~q~vq~~la~~~~~~~aar~~----~~~aa~~~~~~~~~~-~~~~~~~~~aK~~a 362 (439)
T 2c12_A 294 EALVFAKSDTRGGSKH------IIEHQSVADKLIDCKIRLETSRLL----VWKAVTTLEDEALEW-KVKLEMAMQTKIYT 362 (439)
T ss_dssp HHHHHHHHCCTTSSSC------GGGSHHHHHHHHHHHHHHHHHHHH----HHHHHHHHTCTTSCH-HHHHHHHHHHHHHH
T ss_pred HHHHHHhhceeeCCee------hhccHHHHHHHHHHHHHHHHHHHH----HHHHHHHHhCCCccc-hhhHHHHHHHHHHH
Confidence 99999996 7889999 999999999999999999996544 455555556542110 11344689999999
Q ss_pred HHHHHHHHHHHHHHhCccCccCccchhccccccccccccCccH-HHHHHHHHHHHH
Q 048624 417 TSYTAKSLSVCREACGGHGYAAVNRFGSLRNDHDIFQTFEGDN-TVLLQQVAGDLL 471 (673)
Q Consensus 417 t~~a~~~~~~~~q~~Gg~Gy~~~~~l~r~~rd~~~~~~~eG~~-~vl~~~ia~~ll 471 (673)
++.+.++++.|+|+|||.||+.+++++|+|||++...+++|++ ++++..+++.+.
T Consensus 363 ~~~a~~v~~~a~q~~Gg~g~~~~~~l~r~~Rda~~~~i~~G~~~~~~~~~i~~~l~ 418 (439)
T 2c12_A 363 TDVAVECVIDAMKAVGMKSYAKDMSFPRLLNEVMCYPLFDGGNIGLRRRQMQRVMA 418 (439)
T ss_dssp HHHHHHHHHHHHHHHCGGGGBTTSSHHHHHHHHTTTTTSSSCTTTTHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhcCceEEcCCChHHHHHHhhhcceeecCChHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999988 799998876543
No 32
>3m9v_A FAD-dependent oxidoreductase; KIJD3, fatty acyl-COA dehydrogenase family, kijanose, kijani FAD, flavoprotein; HET: TYD; 2.05A {Actinomadura kijaniata}
Probab=100.00 E-value=4.1e-50 Score=442.59 Aligned_cols=386 Identities=16% Similarity=0.112 Sum_probs=303.4
Q ss_pred CCCCccCcCchHhhhhhcCCCHHHHHH-HHHHHhcCCCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCCccccCC-----
Q 048624 32 MAPSAQNYDLCAVIWLYERKAQGDTRE-SVEYFNSRPDLQTPVEILKDDHRELCWRQLLGLVREAGIKPFKYVAE----- 105 (673)
Q Consensus 32 ~~~~~~~~~~~~~m~~~l~~e~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~Gl~~~~~p~~----- 105 (673)
||+..+....+..|+|.++++++++++ +++++. . + . +...+.++.+. +++++|+.|++.||+++.+|++
T Consensus 3 ~~~~~~~~~~~~~m~~~lt~e~~~l~~~~r~~~~-~-~-~-~~a~~~d~~~~-~~~~~~~~l~~~Gl~~l~~P~~~GG~g 77 (439)
T 3m9v_A 3 MPPWTARQDSTTGLYAPVTPAGRVLLDRLAAHLP-R-I-R-STAAEHDRDGT-FPTDTFDALRKDGLMGATVPAELGGLG 77 (439)
T ss_dssp ---------CCSTTSSCSSHHHHHHHHHHHTTHH-H-H-H-HHHHHHHHHTC-CCHHHHHHHHHTTGGGTTSCGGGTSCC
T ss_pred CCCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHHH-H-H-h-hhHHHHHhcCC-CCHHHHHHHHHCCCccCCCChhhCCCC
Confidence 444333223666799999999999998 666664 2 2 2 22333444444 3489999999999999999953
Q ss_pred --CHHHHHHHHHHHhccchhhHHHHHHhHhhHHHHH--hccCChhh---HHhHHhhhhcCCcceeeeccCCCCCCCcCCc
Q 048624 106 --DPAQYFAIAEAVGSVDMSLGIKMGVQYSLWGGSV--INLGTKKH---RDKYYDGIDNLDYPGCFAMTELHHGSNVQGL 178 (673)
Q Consensus 106 --~~~~~~~~~e~la~~~~s~~~~~~~h~~l~~~~i--~~~gt~eq---~~~~l~~i~~g~~~g~~a~TE~~~Gsd~~~~ 178 (673)
++.+++.++|++++.|+++++.+++|..++...+ ..+|+++| |++||+++.+|++++|+++|||+++ +..+
T Consensus 78 l~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~q~~~k~~~l~~l~~g~~~~~~a~tEp~~~--~~~~ 155 (439)
T 3m9v_A 78 VDRLYDVAVALLAVARADASTALALHMQLSRGLTLGYEWRHGDERARTLAERILRGMVAGDAVVCSGIKDHHTA--VTTL 155 (439)
T ss_dssp CCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHTCCCEEEECEECTTC--CCEE
T ss_pred CCCHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhCCCceEEEeecCCCCC--CCce
Confidence 6889999999999999999988888765555443 46699999 8999999999999999999999854 4444
Q ss_pred eeEEEEcCCCCEEEEecCCCCceeeeccCccccCcEEEEEEEEecCCCCCCCCCCCceEEEEEeecCCCCCCCCCCeEEe
Q 048624 179 QTVATFDPIKDEFIINTPNDGAIKWWIGNAAVHGKFATVFAKLMLPTHDSKGYSDMGVHAFIVPIRDMKTHQTLPGIEIH 258 (673)
Q Consensus 179 ~TtA~~d~~~~~~vLntP~~~G~K~~i~~~~~~A~~~vV~Ar~~~~g~~~~~~~~~g~~~FlV~~rd~~~~~~~pGv~v~ 258 (673)
+|+ + +|+|+|| |+|+|+||+. +|||++|+|++..+++.. |+++|+||.+ .|||+|.
T Consensus 156 ~t~---~--~~g~vln-----G~K~~~s~a~-~Ad~~~v~art~~~~~~~------g~~~flVp~~-------~pGv~i~ 211 (439)
T 3m9v_A 156 RPD---G--AGGWLLS-----GRKTLVSMAP-VGTHFVINARTDGTDGPP------RLASPVVTRD-------TPGFTVL 211 (439)
T ss_dssp EEC---S--SSCEEEE-----EEEEEETTGG-GCSEEEECEEECC--CCC------CEEEEEEETT-------CTTEEEC
T ss_pred eec---c--CCEEEEE-----eEEEeecCcc-ccCEEEEEEEecCCCCCc------eeEEEEEECC-------CCCeEEC
Confidence 443 4 7899999 9999999999 999999999997544333 8999999975 5999999
Q ss_pred cCCCCccCCCCCceeEEecceecCcccccccCCcccCCCccccCCcccchHHHHHHhhHhHHHHHHHHHHHHHHHHHHHH
Q 048624 259 DCGHKVGLNGVDNGALRFCSVRIPRDNLLNRFGDVSRDGKYTSSLPTINKRFAATLGELVGGRVGLAYSSVGVLKIAATI 338 (673)
Q Consensus 259 ~~~~~~G~~~~~~~~l~fd~v~VP~~~lL~~~~~v~~~G~~~~~~~~~~~g~~~~~~~l~~~rl~~aa~~~G~a~~al~~ 338 (673)
+.|+++|+++++++.|.||||+||.+++|+... ++.++...+..+..+|+.+++.++|+++++++.
T Consensus 212 ~~~~~~G~~~~~~~~v~fddv~VP~~~~lg~~~--------------~g~g~~~~~~~~~~~r~~~aa~~~G~a~~al~~ 277 (439)
T 3m9v_A 212 DNWDGLGMRASGTVDIVFDDCPIPADHVLMRDP--------------VGARNDAVLAGQTVSSVSVLGVYVGVAQAAYDT 277 (439)
T ss_dssp CCCCCSSCTTSCCEEEEEEEEEECGGGEEECCC----------------CCCGGGHHHHHHHHGGGHHHHHHHHHHHHHH
T ss_pred CCcccCCcCCCCceeEEEeeeEcCHHHccCCCC--------------CCchHHHHhhchHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999998311 122222233334558999999999999999999
Q ss_pred HHHHhhhccccCCCCCCcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--CCcc-hhhhHHHHHHhHHHH
Q 048624 339 AIRYSLLRQQFGPPRKPEVSILDYQSQQHKLMPMLASTYAFHFATANLVEKYSEMKKT--HDEQ-LVGDVHALSAGLKSY 415 (673)
Q Consensus 339 a~~ya~~R~qfg~~~~~e~~i~~~q~vq~~La~~~a~~~a~~~~~~~l~~~~~~~~~~--~~~~-~~~~~~~~~~~~K~~ 415 (673)
+++|++. +| |+++|.+|++|+++.+.+++++++.....+.+...... ++.. ........++++|++
T Consensus 278 a~~~a~~-----r~------i~~~~~vq~~la~~~~~~~aar~l~~~aa~~~d~~~~~~~~~~~~~~~~~~~~~~~ak~~ 346 (439)
T 3m9v_A 278 AVAALER-----RP------EPPQAAALTLVAEIDSRLYALRATAGSALTAADALSADLSGDMDERGRQMMRHFQCAKLA 346 (439)
T ss_dssp HHHHHHT-----CS------SCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcC-----CC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccchhhhhHHHHHHHHHHH
Confidence 9999983 45 99999999999999999999776655444333221110 0000 012334567889999
Q ss_pred HHHHHHHHHHHHHHHhCccCccCccchhcccccccccc-ccCccHHHHHHHHHHHHHHH
Q 048624 416 VTSYTAKSLSVCREACGGHGYAAVNRFGSLRNDHDIFQ-TFEGDNTVLLQQVAGDLLKQ 473 (673)
Q Consensus 416 at~~a~~~~~~~~q~~Gg~Gy~~~~~l~r~~rd~~~~~-~~eG~~~vl~~~ia~~ll~~ 473 (673)
+++.+.++++.|+|+|||+||+.+++++++|||+++.. +++|++++++..+++.+|+.
T Consensus 347 a~~~a~~v~~~a~q~~Gg~G~~~~~~l~r~~Rda~~~~~~~~gt~~~~~~~i~~~~lg~ 405 (439)
T 3m9v_A 347 VNRLAPEIVSDCLSLVGGASYTAGHPLARLLRDVQAGRFMQPYAYVDAVDFLSAQALGI 405 (439)
T ss_dssp HHHHHHHHHHHHHHHHCGGGGSTTSHHHHHHHHTTGGGTSSSCCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHhCHHHhcCCChHHHHHHHHHhhhhhCCCchHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999 99999999999999999854
No 33
>3mxl_A Nitrososynthase; flavin monooxygenase, acyl-COA dehydrogenas oxidoreductase; 3.15A {Micromonospora carbonacea}
Probab=100.00 E-value=2.7e-50 Score=438.15 Aligned_cols=373 Identities=14% Similarity=0.073 Sum_probs=301.5
Q ss_pred hhhhhcCCCHHHHHH-HHHHHhcCCCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCCccccCC-------CHHHHHHHHH
Q 048624 44 VIWLYERKAQGDTRE-SVEYFNSRPDLQTPVEILKDDHRELCWRQLLGLVREAGIKPFKYVAE-------DPAQYFAIAE 115 (673)
Q Consensus 44 ~m~~~l~~e~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~Gl~~~~~p~~-------~~~~~~~~~e 115 (673)
.|...+++||+++++ +++++. + + . +...+.++.+.. ++++|+.+.+.||+++.+|++ ++.+...++|
T Consensus 4 ~~~~~lt~e~~~~~~~~r~~~~-~-~-~-~~a~~~d~~~~~-p~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~~~~e 78 (395)
T 3mxl_A 4 DLRAPLTPAGRTVVDLLAGVIP-R-I-S-AEAADRDRTGTF-PVEAFEQFAKLGLMGATVPAELGGLGLTRLYDVATALM 78 (395)
T ss_dssp SSSSCCSHHHHHHHHHHTTTHH-H-H-H-HHHHHHHHHTCC-CHHHHHHHHHHTGGGCSSCTTTTSCCCCCHHHHHHHHH
T ss_pred ccccCCCHHHHHHHHHHHHHHH-H-H-h-hchHHHhhhCCC-CHHHHHHHHHCCCcCcCCChhhCCCCCcCHHHHHHHHH
Confidence 366788999999988 666554 3 2 2 233344544443 489999999999999999964 6789999999
Q ss_pred HHhccchhhHHHHHHhHhhHHHHH--hccCChhhH---HhHHhhhhcCCcceeeeccCCCCCCCcCCceeEEEEcCCCCE
Q 048624 116 AVGSVDMSLGIKMGVQYSLWGGSV--INLGTKKHR---DKYYDGIDNLDYPGCFAMTELHHGSNVQGLQTVATFDPIKDE 190 (673)
Q Consensus 116 ~la~~~~s~~~~~~~h~~l~~~~i--~~~gt~eq~---~~~l~~i~~g~~~g~~a~TE~~~Gsd~~~~~TtA~~d~~~~~ 190 (673)
++++.|+++++.+.+|..++...+ ..+|+++|| ++|||++.+|+.++|+++|||++|+ ..++|+ + +|+
T Consensus 79 el~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~qk~~~~~~l~~~~~g~~~~~~a~tEp~~~~--~~~~t~---~--~~g 151 (395)
T 3mxl_A 79 RLAEADASTALAWHVQLSRGLTLTYEWQHGTPPVRAMAERLLRAMAEGEAAVCGALKDAPGVV--TELHSD---G--AGG 151 (395)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHTSCCEECCCSBCTTCC--CEEEEC---S--SSC
T ss_pred HHHhhCcHHHHHHHHHHHHHHHHHHHhhcCCHHHHhHHHHHHHHHhcCCcEEEEEecCCCCCC--CceEEe---c--CCE
Confidence 999999999988888865555444 356999999 9999999999999999999998763 333332 4 889
Q ss_pred EEEecCCCCceeeeccCccccCcEEEEEEEEecCCCCCCCCCCCceEEEEEeecCCCCCCCCCCeEEecCCCCccCCCCC
Q 048624 191 FIINTPNDGAIKWWIGNAAVHGKFATVFAKLMLPTHDSKGYSDMGVHAFIVPIRDMKTHQTLPGIEIHDCGHKVGLNGVD 270 (673)
Q Consensus 191 ~vLntP~~~G~K~~i~~~~~~A~~~vV~Ar~~~~g~~~~~~~~~g~~~FlV~~rd~~~~~~~pGv~v~~~~~~~G~~~~~ 270 (673)
|+|| |+|+||||+. .|||++|+|++..+++.. |+++|+||.+ .|||++.+.|+++|+++++
T Consensus 152 ~~ln-----G~K~~is~a~-~Ad~~~v~a~~~~~~~~~------g~~~flV~~~-------~pGv~v~~~~~~~G~r~~~ 212 (395)
T 3mxl_A 152 WLLS-----GRKVLVSMAP-IATHFFVHAQRRDDDGSV------FLAVPVVHRD-------APGLTVLDNWDGLGMRASG 212 (395)
T ss_dssp EEEE-----EEEEEETTGG-GCSEECCCEEEECTTSCE------EEECCCEETT-------CTTEEEECCCCBSSCTTSC
T ss_pred EEEe-----eEEEEecCcc-ccCEEEEEEEeCCCCCCC------ceEEEEEECC-------CCceEeCCCchhcCCCCCC
Confidence 9999 9999999999 999999999997544333 8999999965 5999999999999999999
Q ss_pred ceeEEecceecCcccccccCCcccCCCccccCCcccchHHHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccC
Q 048624 271 NGALRFCSVRIPRDNLLNRFGDVSRDGKYTSSLPTINKRFAATLGELVGGRVGLAYSSVGVLKIAATIAIRYSLLRQQFG 350 (673)
Q Consensus 271 ~~~l~fd~v~VP~~~lL~~~~~v~~~G~~~~~~~~~~~g~~~~~~~l~~~rl~~aa~~~G~a~~al~~a~~ya~~R~qfg 350 (673)
++.|.||||+||++++||.. . ++.++...+..+..+|+.+++.++|+++++++.+++|++ |
T Consensus 213 ~~~v~f~~v~Vp~~~~lg~~-~-------------~g~g~~~~~~~~~~~r~~~aa~~~G~a~~al~~a~~~a~-----~ 273 (395)
T 3mxl_A 213 TLEVVFDRCPVRADELLERG-P-------------VGARRDAVLAGQTVSSITMLGIYAGIAQAARDIAVGFCA-----G 273 (395)
T ss_dssp CEEEEEEEEEECGGGCCEEE-E-------------SSCCCTTHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHH-----T
T ss_pred cceEEEcceEcCHHHhcCCC-C-------------CCccHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHc-----C
Confidence 99999999999999999731 0 122233334445568999999999999999999999998 4
Q ss_pred CCCCCcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--CCcc-hhhhHHHHHHhHHHHHHHHHHHHHHHH
Q 048624 351 PPRKPEVSILDYQSQQHKLMPMLASTYAFHFATANLVEKYSEMKKT--HDEQ-LVGDVHALSAGLKSYVTSYTAKSLSVC 427 (673)
Q Consensus 351 ~~~~~e~~i~~~q~vq~~La~~~a~~~a~~~~~~~l~~~~~~~~~~--~~~~-~~~~~~~~~~~~K~~at~~a~~~~~~~ 427 (673)
+| |+++|.+|++|++|.+.+++++++.....+.+...... ++.. ........++++|.++++.+.++++.|
T Consensus 274 r~------i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~~~~~~~~~~~~~ak~~~~~~a~~~~~~a 347 (395)
T 3mxl_A 274 RG------GEPRAGARALVAGLDTRLYALRTTVGAALTNADAASVDLSGDPDERGRRMMTPFQYAKMTVNELAPAVVDDC 347 (395)
T ss_dssp TC------SCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46 99999999999999999999776655544433321111 1100 011334577889999999999999999
Q ss_pred HHHhCccCccCccchhcccccccccc-ccCccHHHHHHHHHHHHHH
Q 048624 428 REACGGHGYAAVNRFGSLRNDHDIFQ-TFEGDNTVLLQQVAGDLLK 472 (673)
Q Consensus 428 ~q~~Gg~Gy~~~~~l~r~~rd~~~~~-~~eG~~~vl~~~ia~~ll~ 472 (673)
+|+|||+||+.+++++|+|||++... +++|++++++.++++.+|+
T Consensus 348 ~q~~Gg~g~~~~~~~~r~~Rda~~~~~~~~g~~~~~~~~ia~~~Lg 393 (395)
T 3mxl_A 348 LSLVGGLAYTAGHPLSRLYRDVRAGGFMQPYSYVDAVDYLSGQALG 393 (395)
T ss_dssp HHHHCGGGGBTTSHHHHHHHHGGGGGGCSSCCHHHHHHHHHHHHSC
T ss_pred HHHhChHhccCCCcHHHHHHHHHhccccCCCCHHHHHHHHHHHHhC
Confidence 99999999999999999999999999 9999999999999999874
No 34
>2or0_A Hydroxylase; APC7385, rhodococcus SP. RHA1, structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE; 2.10A {Rhodococcus SP}
Probab=100.00 E-value=1.5e-48 Score=426.98 Aligned_cols=380 Identities=12% Similarity=0.033 Sum_probs=295.2
Q ss_pred HhhhhhcCCCHHHHHH-HHHHHhcCCCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCCccccCC------CHHHHHHHHH
Q 048624 43 AVIWLYERKAQGDTRE-SVEYFNSRPDLQTPVEILKDDHRELCWRQLLGLVREAGIKPFKYVAE------DPAQYFAIAE 115 (673)
Q Consensus 43 ~~m~~~l~~e~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~Gl~~~~~p~~------~~~~~~~~~e 115 (673)
...+|.+++|++++++ +++++. + + . +...+.++.+. +++++|+.+.+.||+++.+|++ ++.+.+.++|
T Consensus 12 ~~~~~~~~~~~~~l~~~~r~~~~-~-~-~-~~a~~~d~~~~-~p~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~e 86 (414)
T 2or0_A 12 SGRENLYFQGMGRVLDRIEVVAE-E-I-R-GQAVQSEADCR-LTDAAAGLLRDSGAIRLLQPRLYGGYEVHPREFAETVM 86 (414)
T ss_dssp -----------CHHHHHHHHTHH-H-H-H-HHHHHHHHHTS-CCHHHHHHHHHHTGGGTTSCGGGTCCCCCHHHHHHHHH
T ss_pred ccccCCCCccHHHHHHHHHHHHH-H-H-H-HhHHHHHhcCC-CCHHHHHHHHHCCCchhcCchhhCCCCCCHHHHHHHHH
Confidence 3567888999988888 666664 3 2 2 12223344333 3488999999999999999965 8899999999
Q ss_pred HHhccchhhHHHHHHhHhhHHHHHhccCChhhHHhHHhhhhcCCcceeeeccCCCCCCCcCCceeEEEEcCCCCEEEEec
Q 048624 116 AVGSVDMSLGIKMGVQYSLWGGSVINLGTKKHRDKYYDGIDNLDYPGCFAMTELHHGSNVQGLQTVATFDPIKDEFIINT 195 (673)
Q Consensus 116 ~la~~~~s~~~~~~~h~~l~~~~i~~~gt~eq~~~~l~~i~~g~~~g~~a~TE~~~Gsd~~~~~TtA~~d~~~~~~vLnt 195 (673)
++++.|+++++.+.+| .++...|..+|+++|+++|+| +|+.++|+++| | +|+|+++ +|+|+||
T Consensus 87 ela~~~~~~~~~~~~~-~~~~~~l~~~g~~~q~~~~l~---~g~~~~a~a~t-p---------~t~A~~~--~~g~~ln- 149 (414)
T 2or0_A 87 GVAALDGASGWVTGIV-GVHPWELAFADPQVQEEIWGE---DNDTWMASPYA-P---------MGVATPV--DGGYVLK- 149 (414)
T ss_dssp HHHHHCHHHHHHHHHH-TTHHHHHTTSCHHHHHHHHSS---CTTCCEECCCS-C---------CEEEEEE--TTEEEEE-
T ss_pred HHHhhChHHHHHHHHH-HHHHHHHHhCCHHHHHHHHcc---CCCeEEEeccC-C---------CceeEEE--CCeEEEE-
Confidence 9999999998877776 477888999999999999999 69999999998 4 6899998 8999999
Q ss_pred CCCCceeeeccCccccCcEEEEEEEEecCCCCCCCCCCCceEEEEEeecCCCCCCCCCCeEEe-cCCCCccCCCCCceeE
Q 048624 196 PNDGAIKWWIGNAAVHGKFATVFAKLMLPTHDSKGYSDMGVHAFIVPIRDMKTHQTLPGIEIH-DCGHKVGLNGVDNGAL 274 (673)
Q Consensus 196 P~~~G~K~~i~~~~~~A~~~vV~Ar~~~~g~~~~~~~~~g~~~FlV~~rd~~~~~~~pGv~v~-~~~~~~G~~~~~~~~l 274 (673)
|+|+|+||+. .|||++|+|++..+++.. +..|+++|+||. +||++. +.|+++|+++++++.|
T Consensus 150 ----G~K~~is~a~-~Ad~~~v~a~~~~~~g~~---~~~g~~~flV~~---------~gv~v~~~~~~~~G~r~~~~~~v 212 (414)
T 2or0_A 150 ----GRWSFSSGTD-HCQWAFLGAMVGDGEGGI---ATPSSLHVILPR---------TDYQIVEDTWDVIGLRGTGSKDL 212 (414)
T ss_dssp ----EEEEEETTGG-GCSEEEEEEEECC--------CCCSEEEEEEEG---------GGCEEETTCCCBSSCGGGCCEEE
T ss_pred ----eeEeccCCCc-hhhEEEEEEEecCCCCCc---ccceeEEEEEEh---------hhcEEecCCCccccCcccCCCcE
Confidence 9999999999 999999999986321100 011789999994 379999 9999999999999999
Q ss_pred EecceecCcccccccCCcccCCCccccCCcccchHHHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc-CCCC
Q 048624 275 RFCSVRIPRDNLLNRFGDVSRDGKYTSSLPTINKRFAATLGELVGGRVGLAYSSVGVLKIAATIAIRYSLLRQQF-GPPR 353 (673)
Q Consensus 275 ~fd~v~VP~~~lL~~~~~v~~~G~~~~~~~~~~~g~~~~~~~l~~~rl~~aa~~~G~a~~al~~a~~ya~~R~qf-g~~~ 353 (673)
.||||+||.+++|+....+ +|.|.... ...|+......+..+|+.+++.++|+++++++.+++|+++|+|| |+|
T Consensus 213 ~fd~v~VP~~~~lg~~~~~--~g~~~g~~--~~~g~~~~~~~~~~~r~~~aa~~lG~a~~al~~a~~ya~~R~~f~G~~- 287 (414)
T 2or0_A 213 IVDGAFVPGYRTLNAAKVM--DGRAQKEA--GRPEPLFNMPYSCMFPLGITAAVIGITEGALACHIAVQKDRVAITGQK- 287 (414)
T ss_dssp EEEEEEEEGGGEEEHHHHH--HSHHHHHH--TCSCSGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCBCTTSCB-
T ss_pred EEccEEecHHHeecccccc--ccCCCccc--cCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCc-
Confidence 9999999999999741100 00000000 00112233455778999999999999999999999999999999 988
Q ss_pred CCcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchhhhHHHHHHhHHHHHHHHHHHHHHHHHHHhCc
Q 048624 354 KPEVSILDYQSQQHKLMPMLASTYAFHFATANLVEKYSEMKKTHDEQLVGDVHALSAGLKSYVTSYTAKSLSVCREACGG 433 (673)
Q Consensus 354 ~~e~~i~~~q~vq~~La~~~a~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~K~~at~~a~~~~~~~~q~~Gg 433 (673)
|+++|.+|++|++|.+.+++++++.....+.+......+.. ...+....++++|+++++.+.++++.|+|+|||
T Consensus 288 -----i~~~q~vq~~la~~~~~~~aar~l~~~aa~~~~~~~~~g~~-~~~~~~~~~~~aK~~a~e~a~~v~~~a~q~~Gg 361 (414)
T 2or0_A 288 -----IKEDPYVLSAIGESAAEINASRVSLIETADRFYDKVDAGKE-ITFEERAIGRRTQIAAAWRAVRAADEIFARAGG 361 (414)
T ss_dssp -----GGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCG
T ss_pred -----cccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCh
Confidence 99999999999999999999766554444433221114321 112356678999999999999999999999999
Q ss_pred cCccCccchhccccccccccccCc-cHHHHHHHHHHHHHH
Q 048624 434 HGYAAVNRFGSLRNDHDIFQTFEG-DNTVLLQQVAGDLLK 472 (673)
Q Consensus 434 ~Gy~~~~~l~r~~rd~~~~~~~eG-~~~vl~~~ia~~ll~ 472 (673)
.||+.+++++|+|||+++..+++| ++++++..+++.+|+
T Consensus 362 ~g~~~~~~l~r~~Rda~~~~~~~G~t~~~~~~~ia~~~lg 401 (414)
T 2or0_A 362 GALHYKTPMQRFWRDAHAGLAHAVHVPGPTNHASALTQLG 401 (414)
T ss_dssp GGGBTTSSHHHHHHHHHHHHTSGGGCCHHHHHHHHHHHTT
T ss_pred HhhccCCchhHHHHHHHHHHcCCcccchHHHHHHHHHHhC
Confidence 999999999999999999999999 999999999999874
No 35
>2rfq_A 3-HSA hydroxylase, oxygenase; rhodococcus SP. RHA1, structural genomics protein structure initiative, midwest center for structural genomics, MCSG; HET: 1PS; 1.65A {Rhodococcus SP} PDB: 3aff_A 3afe_A
Probab=100.00 E-value=2.4e-47 Score=414.79 Aligned_cols=365 Identities=12% Similarity=0.054 Sum_probs=292.8
Q ss_pred HHHH-HHHHHhcCCCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCCccccCC------CHHHHHHHHHHHhccchhhHHH
Q 048624 55 DTRE-SVEYFNSRPDLQTPVEILKDDHRELCWRQLLGLVREAGIKPFKYVAE------DPAQYFAIAEAVGSVDMSLGIK 127 (673)
Q Consensus 55 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~Gl~~~~~p~~------~~~~~~~~~e~la~~~~s~~~~ 127 (673)
++++ +++++. + + . +...+.++.+. +++++|+.+.+.||+++.+|++ ++.+.+.++|++++.|+++++.
T Consensus 11 ~l~~~~~~~~~-~-~-~-~~~~~~d~~~~-~p~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eela~~~~~~~~~ 85 (394)
T 2rfq_A 11 EVMQRLDALLP-T-L-R-ERAQETEDLRR-IPDDSMKALQETGFFRLLQPEQWGGYQADPVLFYSAVRKIASACGSTGWV 85 (394)
T ss_dssp HHHHHHHHHHH-H-H-H-HTHHHHHHHTS-CCHHHHHHHHHHTGGGTTSCGGGTCCCCCHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHH-H-H-H-HhHHHHHhcCC-CCHHHHHHHHHCCCceecCchhhCCCCCCHHHHHHHHHHHHhhChhHHHH
Confidence 4555 556554 2 2 1 11223344333 3488999999999999999965 8899999999999999999887
Q ss_pred HHHhHhhHHHHHhccCChhhHHhHHhhhhcCCcceeeeccCCCCCCCcCCceeEEEEcCCCCEEEEecCCCCceeeeccC
Q 048624 128 MGVQYSLWGGSVINLGTKKHRDKYYDGIDNLDYPGCFAMTELHHGSNVQGLQTVATFDPIKDEFIINTPNDGAIKWWIGN 207 (673)
Q Consensus 128 ~~~h~~l~~~~i~~~gt~eq~~~~l~~i~~g~~~g~~a~TE~~~Gsd~~~~~TtA~~d~~~~~~vLntP~~~G~K~~i~~ 207 (673)
+.+|. ++...|..+|+++|+++|+| +|+.++|+++| | +|+|+++ +|+|+|| |+|+||||
T Consensus 86 ~~~~~-~~~~~l~~~g~~~q~~~~l~---~g~~~~~~a~t-p---------~t~A~~~--~~g~~ln-----G~K~~is~ 144 (394)
T 2rfq_A 86 SSIIG-VHNWHLALFSQQAQEDVWGN---DTDVRISSSYA-P---------MGAGQVV--DGGYTVN-----GAWAWSSG 144 (394)
T ss_dssp HHHHH-HHHHHHTTSCHHHHHHHHSS---CTTCCEEEECS-C---------SEEEEEE--TTEEEEE-----EEEEEETT
T ss_pred HHHHH-HHHHHHHhCCHHHHHHHhCC---CCCeEEEeccC-C---------CceEEEe--CCeEEEe-----eeEeccCC
Confidence 77764 67788999999999999998 69999999988 3 5899998 8999999 99999999
Q ss_pred ccccCcEEEEEEEEecCCCCCCCCCCCceEEEEEeecCCCCCCCCCCeEEecCCCCccCCCCCceeEEecceecCccccc
Q 048624 208 AAVHGKFATVFAKLMLPTHDSKGYSDMGVHAFIVPIRDMKTHQTLPGIEIHDCGHKVGLNGVDNGALRFCSVRIPRDNLL 287 (673)
Q Consensus 208 ~~~~A~~~vV~Ar~~~~g~~~~~~~~~g~~~FlV~~rd~~~~~~~pGv~v~~~~~~~G~~~~~~~~l~fd~v~VP~~~lL 287 (673)
+. +|||++|+|++..+++. +|+++|+||. +||++.+.|+++|+++++++.|.||||+||.+++|
T Consensus 145 a~-~Ad~~~v~a~~~~~g~~------~~~~~flV~~---------~gv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~l 208 (394)
T 2rfq_A 145 CD-HASWAVLGGPVIKDGRP------VDFVSFLIPR---------EDYRIDDVWNVVGLRGTGSNTVVVEDVFVPTHRVL 208 (394)
T ss_dssp GG-GCSEEEEEEEEEETTEE------EEEEEEEEEG---------GGCEEECCCCBSSCGGGCCEEEEEEEEEEEGGGEE
T ss_pred Cc-ccceEEEeeeecCCCCC------CceeEEEEEh---------hhcEEeCCccccccccCCCCceEEcceEcChHHhc
Confidence 99 99999999998533322 2789999994 37999999999999999999999999999999999
Q ss_pred ccCCcccCCCccccCCcccchHHHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHHhhhcc---ccCCCCCCcccccccHH
Q 048624 288 NRFGDVSRDGKYTSSLPTINKRFAATLGELVGGRVGLAYSSVGVLKIAATIAIRYSLLRQ---QFGPPRKPEVSILDYQS 364 (673)
Q Consensus 288 ~~~~~v~~~G~~~~~~~~~~~g~~~~~~~l~~~rl~~aa~~~G~a~~al~~a~~ya~~R~---qfg~~~~~e~~i~~~q~ 364 (673)
+.... .+|.+.... ...++......+...|+.+++.++|+++++++.+++|+++|+ |||+| |+++|.
T Consensus 209 g~~~~--~~g~~~g~~--~~~g~~~~~~~~~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~~~~fG~~------i~~~q~ 278 (394)
T 2rfq_A 209 SFKAM--SNLTAPGLE--RNTAPVYKMPWGTIHPTTISAPIVGMAYGAYDAHVEHQGKRVRAAFAGEK------AKDDPF 278 (394)
T ss_dssp EHHHH--HTTCCGGGT--TCCCGGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCG------GGSCHH
T ss_pred ccccc--cccCCCCcc--cCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcCCCCCcc------cccCHH
Confidence 74100 001000000 001122334456788999999999999999999999999999 99999 999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchhhhHHHHHHhHHHHHHHHHHHHHHHHHHHhCccCccCccchhc
Q 048624 365 QQHKLMPMLASTYAFHFATANLVEKYSEMKKTHDEQLVGDVHALSAGLKSYVTSYTAKSLSVCREACGGHGYAAVNRFGS 444 (673)
Q Consensus 365 vq~~La~~~a~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~K~~at~~a~~~~~~~~q~~Gg~Gy~~~~~l~r 444 (673)
+|++|++|.+.+++++++.....+.+....+.+... ..+....++++|.++++.+.++++.|+|+|||.||+.+++++|
T Consensus 279 vq~~la~~~~~~~aar~~~~~aa~~~~~~~~~g~~~-~~~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~~~~l~r 357 (394)
T 2rfq_A 279 AKVRIAEASSDIDAAWRQLSGNVADEYALLVAGEEV-PFELRLRARRDQVRATGRAISSIDKLFESSGATALANGTPLQR 357 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGBTTCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChhhhhcCCcHHH
Confidence 999999999999997665544444332211143211 1245667899999999999999999999999999999999999
Q ss_pred cccccccccccCc-cHHHHHHHHHHHHHH
Q 048624 445 LRNDHDIFQTFEG-DNTVLLQQVAGDLLK 472 (673)
Q Consensus 445 ~~rd~~~~~~~eG-~~~vl~~~ia~~ll~ 472 (673)
+|||++...+++| ++++++..+++.+|+
T Consensus 358 ~~Rda~~~~~~~g~~~~~~~~~i~~~llg 386 (394)
T 2rfq_A 358 FWRDAHAGRVHAANDPERAYVMYGTGEFG 386 (394)
T ss_dssp HHHHHHHHTTSGGGCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHcccccCchhHHHHHHHHHhC
Confidence 9999999999999 999999999998874
No 36
>2jbr_A P-hydroxyphenylacetate hydroxylase C2 oxygenase C; flavoenzyme hydroxylase, oxidoreductase; 2.3A {Acinetobacter baumannii} PDB: 2jbs_A* 2jbt_A*
Probab=100.00 E-value=2.8e-47 Score=417.72 Aligned_cols=337 Identities=11% Similarity=0.031 Sum_probs=283.8
Q ss_pred HHHHHHHHHHHcCCCCccccCC------CHHHHHHHHHHHhccchhhHHHHHHhHhhHHHHHhccCChhhHHhHHhhhhc
Q 048624 84 CWRQLLGLVREAGIKPFKYVAE------DPAQYFAIAEAVGSVDMSLGIKMGVQYSLWGGSVINLGTKKHRDKYYDGIDN 157 (673)
Q Consensus 84 ~~~~~~~~l~e~Gl~~~~~p~~------~~~~~~~~~e~la~~~~s~~~~~~~h~~l~~~~i~~~gt~eq~~~~l~~i~~ 157 (673)
.++++|+.+.+.||+++.+|++ ++.+...+.|++++.|+++++.+.+| .++...|..+|+++|+++|+|+
T Consensus 64 ~p~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eela~~~~~~~~~~~~~-~~~~~~l~~~g~~~q~~~~l~~--- 139 (422)
T 2jbr_A 64 VPDENIKLLKEIGLHRAFQPKVYGGLEMSLPDFANCIVTLAGACAGTAWAFSLL-CTHSHQIAMFSKQLQDEIWLKD--- 139 (422)
T ss_dssp CCHHHHHHHHHTTGGGSSSCGGGTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHH-HHHHHHHTTSCHHHHHHHHTTC---
T ss_pred CCHHHHHHHHHCCchhcCCchhcCCCCCCHHHHHHHHHHHHhhCcCHHHHHHHH-HHHHHHHHhCCHHHHHHHHccC---
Confidence 3488999999999999999965 88999999999999999998877766 4678889999999999999996
Q ss_pred CCcceeeeccCCCCCCCcCCceeEEEEcCCCCEEEEecCCCCceeeeccCccccCcEEEEEEEEecCCCCCCCCCCCceE
Q 048624 158 LDYPGCFAMTELHHGSNVQGLQTVATFDPIKDEFIINTPNDGAIKWWIGNAAVHGKFATVFAKLMLPTHDSKGYSDMGVH 237 (673)
Q Consensus 158 g~~~g~~a~TE~~~Gsd~~~~~TtA~~d~~~~~~vLntP~~~G~K~~i~~~~~~A~~~vV~Ar~~~~g~~~~~~~~~g~~ 237 (673)
|+.++|+++| | +|+|+++ +|||+|| |+|+|+||+. .|||++|+|++..+++. +|++
T Consensus 140 g~~~~a~a~t-p---------~t~A~~~--~~g~~ln-----G~K~~is~a~-~Ad~~~v~a~~~~~~g~------~g~~ 195 (422)
T 2jbr_A 140 PDATASSSIA-P---------FGKVEEV--EGGIILN-----GDYGWSSGCD-HAEYAIVGFNRFDADGN------KIYS 195 (422)
T ss_dssp TTCCEEEECS-C---------CSEEEEE--TTEEEEE-----EEEEEETTGG-GCSEEEEEEEEECTTSC------EEEE
T ss_pred CCeEEEeecC-C---------CeeEEEe--CCEEEEe-----eeEeeecCCc-cccEEEEEEEecCCCCC------ceeE
Confidence 8999999988 3 5799998 8999999 9999999999 99999999998743222 3899
Q ss_pred EEEEeecCCCCCCCCCCeEEecCCCCccCCCCCceeEEecceecCcccccccCCcccCCCccccCCcccchH-----HHH
Q 048624 238 AFIVPIRDMKTHQTLPGIEIHDCGHKVGLNGVDNGALRFCSVRIPRDNLLNRFGDVSRDGKYTSSLPTINKR-----FAA 312 (673)
Q Consensus 238 ~FlV~~rd~~~~~~~pGv~v~~~~~~~G~~~~~~~~l~fd~v~VP~~~lL~~~~~v~~~G~~~~~~~~~~~g-----~~~ 312 (673)
+|+||. +||++.+.|+++|+++++++.|.||||+||.+++||....++ |.+ ++.| +..
T Consensus 196 ~flV~~---------~gv~v~~~~~~~G~r~~~~~~v~fddv~VP~~~~lg~~~~~~--g~~------~g~g~~~~~~~~ 258 (422)
T 2jbr_A 196 FGVIPR---------SDYEIVDNWYAQAIKSSGSKMLKLVNVFIPEYRISKAKDMME--GKS------AGFGLYPDSKIF 258 (422)
T ss_dssp EEEEEG---------GGCEEECCCCBSSSGGGCCEEEEEEEEEEEGGGEEEHHHHHH--TCS------TTTTSCTTCSSS
T ss_pred EEEEEc---------CceEEeCCccccCcCCCCCCcEEEeeEEecHHHeeccccccc--CCC------CcccccCCCccc
Confidence 999994 379999999999999999999999999999999997521000 000 0111 223
Q ss_pred HHhhHhHHHHHHHHHHHHHHHHHHHHHHHHhhhcc--ccCCCCCCcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048624 313 TLGELVGGRVGLAYSSVGVLKIAATIAIRYSLLRQ--QFGPPRKPEVSILDYQSQQHKLMPMLASTYAFHFATANLVEKY 390 (673)
Q Consensus 313 ~~~~l~~~rl~~aa~~~G~a~~al~~a~~ya~~R~--qfg~~~~~e~~i~~~q~vq~~La~~~a~~~a~~~~~~~l~~~~ 390 (673)
.+..+..+|+.+++.++|+++++++.+++|+++|+ |||+| |+++|.+|++|++|.+.+++++++.....+.+
T Consensus 259 ~~~~~~~~r~~~aa~~lG~a~~al~~a~~ya~~R~~~~fG~~------i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~ 332 (422)
T 2jbr_A 259 YTPYRPYFASGFSAVSLGIAERMIEAFKEKQRNRVRAYTGAN------VGLATPALMRIAESTHQVAAARALLEKTWEDH 332 (422)
T ss_dssp SSCHHHHHTTHHHHHHHHHHHHHHHHHHHHHTTCBCTTTCCB------CTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCc------cccCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44567788999999999999999999999999998 99999 99999999999999999999766654444433
Q ss_pred HHHhccCCcchhhhHHHHHHhHHHHHHHHHHHHHHHHHHHhCccCccCccchhccccccccccccCccH-HHHHHHHHHH
Q 048624 391 SEMKKTHDEQLVGDVHALSAGLKSYVTSYTAKSLSVCREACGGHGYAAVNRFGSLRNDHDIFQTFEGDN-TVLLQQVAGD 469 (673)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~K~~at~~a~~~~~~~~q~~Gg~Gy~~~~~l~r~~rd~~~~~~~eG~~-~vl~~~ia~~ 469 (673)
......+... ..+....++++|.++++.+.++++.|+|+|||.||+.+++++|+|||++...+++|++ ++++..+++.
T Consensus 333 d~~~~~g~~~-~~~~~~~~~~aK~~a~e~a~~v~~~a~q~~Gg~g~~~~~~l~r~~Rda~~~~~~~G~~~e~~~~~ia~~ 411 (422)
T 2jbr_A 333 RIHGLNHQYP-NKETLAFWRTNQAYAVKMCIEAVDRLMAAAGATSFMDNSELQRLFRDAHMTGAHAYTDYDVCAQILGRE 411 (422)
T ss_dssp HHHHHTTCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCGGGGBTTCHHHHHHHHHHHHTSSTTTCHHHHHHHHHHH
T ss_pred HHHHhcCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHhhhcCCcHHHHHHHHHHHhcCCccchhHHHHHHHHH
Confidence 2211133210 1234567899999999999999999999999999999999999999999999999999 9999999998
Q ss_pred HHH
Q 048624 470 LLK 472 (673)
Q Consensus 470 ll~ 472 (673)
+|+
T Consensus 412 ~lg 414 (422)
T 2jbr_A 412 LMG 414 (422)
T ss_dssp HTT
T ss_pred HhC
Confidence 874
No 37
>3djl_A Protein AIDB; alpha helix, beta-barrel, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.70A {Escherichia coli} PDB: 3u33_A*
Probab=100.00 E-value=3.1e-46 Score=418.11 Aligned_cols=336 Identities=16% Similarity=0.147 Sum_probs=282.6
Q ss_pred HHHHHHHHHHcCCCCccc--cCC-CHH-HHHHHHHHHhccchhhHHHHHHhHhhHHHHHhccCChhhHHhHHhhhhcCCc
Q 048624 85 WRQLLGLVREAGIKPFKY--VAE-DPA-QYFAIAEAVGSVDMSLGIKMGVQYSLWGGSVINLGTKKHRDKYYDGIDNLDY 160 (673)
Q Consensus 85 ~~~~~~~l~e~Gl~~~~~--p~~-~~~-~~~~~~e~la~~~~s~~~~~~~h~~l~~~~i~~~gt~eq~~~~l~~i~~g~~ 160 (673)
++++++.+.+.||+++.+ |.+ +.. ........++..+.+.+.++.++.+ ++..|..+| ++|+++|+|++.+|++
T Consensus 88 ~~~~~~~l~e~Gl~~l~~~~p~~~Gg~~~~~~~~~~~~~~~~~~~~p~~~t~~-~~~~L~~~g-~eqk~~~lp~l~sge~ 165 (541)
T 3djl_A 88 WHLLMQALCTNRVHNLAWEEDARSGAFVARAARFMLHAQVEAGSLCPITMTFA-ATPLLLQML-PAPFQDWTTPLLSDRY 165 (541)
T ss_dssp HHHHHHHHHHTTTTTGGGSTTCCTTHHHHHHHHHHHHHHHCSTTHHHHHHHHH-HHHHHHHHC-CGGGGGGHHHHTCSCC
T ss_pred HHHHHHHHHhCCcccCCCCCCCCCCcHHHHHHHHHHHHHHHHhhhcHHHHHHH-HHHHHHHcC-HHHHHHHHHHHhCCCc
Confidence 488899999999999999 444 322 2222233333344444455555553 667888899 9999999999999998
Q ss_pred -------------ceeeeccCCCCCCCcCCceeEEEEcCCCCEEEEecCCCCceeeeccCccccCcEEEEEEEEecCCCC
Q 048624 161 -------------PGCFAMTELHHGSNVQGLQTVATFDPIKDEFIINTPNDGAIKWWIGNAAVHGKFATVFAKLMLPTHD 227 (673)
Q Consensus 161 -------------~g~~a~TE~~~Gsd~~~~~TtA~~d~~~~~~vLntP~~~G~K~~i~~~~~~A~~~vV~Ar~~~~g~~ 227 (673)
++|+++|||++|||+.+++|+|++++ +|+|+|| |+|+|+| +. .|||++|+||++
T Consensus 166 ~p~~~~~~~~~g~~~~~a~TEp~~GSDl~~~~T~A~~~~-~g~y~Ln-----G~K~f~S-a~-~Ad~~lVlArt~----- 232 (541)
T 3djl_A 166 DSHLLPGGQKRGLLIGMGMTEKQGGSDVMSNTTRAERLE-DGSYRLV-----GHKWFFS-VP-QSDAHLVLAQTA----- 232 (541)
T ss_dssp CCCSSCGGGSSSCCEEEECCBTTBSSCGGGCCCEEEECT-TSCEEEE-----EEEEEEE-CT-TSSEEEEEEEET-----
T ss_pred ccccccccccccceeEEEeccCCcCCCcccceeEEEEcC-CCeEEEE-----EEEEeec-cc-ccCEEEEEEEEC-----
Confidence 89999999999999999999999874 5789999 9999999 77 999999999983
Q ss_pred CCCCCCCceEEEEEeecCCCCCCCCCCeEEecCCCCccCCCCCceeEEecceecCcccccccCCcccCCCccccCCcccc
Q 048624 228 SKGYSDMGVHAFIVPIRDMKTHQTLPGIEIHDCGHKVGLNGVDNGALRFCSVRIPRDNLLNRFGDVSRDGKYTSSLPTIN 307 (673)
Q Consensus 228 ~~~~~~~g~~~FlV~~rd~~~~~~~pGv~v~~~~~~~G~~~~~~~~l~fd~v~VP~~~lL~~~~~v~~~G~~~~~~~~~~ 307 (673)
. |+++|+||.+.+++ ..|||+|.++|+++|+++++++.|.||||+ +++||. ++
T Consensus 233 ~------Gis~flVp~~~p~~--~~~Gv~i~~~~~~~G~rgt~s~~v~fddv~---~~llG~----------------~g 285 (541)
T 3djl_A 233 G------GLSCFFVPRFLPDG--QRNAIRLERLKDKLGNRSNASCEVEFQDAI---GWLLGL----------------EG 285 (541)
T ss_dssp T------EEEEEEEESBCTTS--CBCSEEEEEECCCSSCTTSCEEEEEEEEEE---EEEESS----------------TT
T ss_pred C------ceEEEEEecCCCCC--CcCCeEEeeccccCCCcCCceeEEEEccce---eeeeec----------------CC
Confidence 2 89999999764221 135999999999999999999999999995 889976 56
Q ss_pred hHHHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCcccccccHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048624 308 KRFAATLGELVGGRVGLAYSSVGVLKIAATIAIRYSLLRQQFGPPRKPEVSILDYQSQQHKLMPMLASTYAFHFATANLV 387 (673)
Q Consensus 308 ~g~~~~~~~l~~~rl~~aa~~~G~a~~al~~a~~ya~~R~qfg~~~~~e~~i~~~q~vq~~La~~~a~~~a~~~~~~~l~ 387 (673)
+|+..+...+..+|+.+++.++|+++++++.+++|++.|+|||+| |+++|.+|++|+++.+.+++++++.
T Consensus 286 ~G~~~~~~~l~~~Rl~~aa~~~G~a~~al~~a~~ya~~R~~fG~~------i~~~p~vq~~La~~~~~~eaaral~---- 355 (541)
T 3djl_A 286 EGIRLILKMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNP------LIQQPLMRHVLSRMALQLEGQTALL---- 355 (541)
T ss_dssp CHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEE------GGGSHHHHHHHHHHHHHHHHHHHHH----
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCccCCCc------hhhCHHHHHHHHHHHHHHHHHHHHH----
Confidence 788889999999999999999999999999999999999999998 9999999999999999999966554
Q ss_pred HHHHHHhccCCc-chhhhHHHHHHhHHHHHHHHHHHHHHHHHHHhCccCccCccchhccccccccccccCccHHHHHHHH
Q 048624 388 EKYSEMKKTHDE-QLVGDVHALSAGLKSYVTSYTAKSLSVCREACGGHGYAAVNRFGSLRNDHDIFQTFEGDNTVLLQQV 466 (673)
Q Consensus 388 ~~~~~~~~~~~~-~~~~~~~~~~~~~K~~at~~a~~~~~~~~q~~Gg~Gy~~~~~l~r~~rd~~~~~~~eG~~~vl~~~i 466 (673)
+.+++..+.+.. ......+..++++|+++++.+.++++.|+|+|||+||+.+++++|+|||+++..|++|++++++..+
T Consensus 356 ~~aa~~~d~~~~~~~~~~~~~~~~~aK~~ase~a~~~~~~a~q~~Gg~G~~~e~~l~r~~Rda~~~~i~eGt~ei~~~~i 435 (541)
T 3djl_A 356 FRLARAWDRRADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPRLYREMPVNSIWEGSGNIMCLDV 435 (541)
T ss_dssp HHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGSTTSHHHHHHHHHHHHHHGGGHHHHHHHHH
T ss_pred HHHHHHHhccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeeecCCCcHHHHHHhhhhhheeCCcHHHHHHHH
Confidence 444444444311 1112356678999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHH
Q 048624 467 AGDLLK 472 (673)
Q Consensus 467 a~~ll~ 472 (673)
+|.+++
T Consensus 436 ~r~l~~ 441 (541)
T 3djl_A 436 LRVLNK 441 (541)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 998875
No 38
>2yyk_A 4-hydroxyphenylacetate-3-hydroxylase; structurome, riken spring-8 center, oxygnase component, 4- hydroxyphenylacetate 3-monooxygenase; 1.60A {Thermus thermophilus} PDB: 2yyl_A* 2yym_A* 2yyi_A* 2yyg_A* 2yyj_A*
Probab=100.00 E-value=3.5e-33 Score=308.44 Aligned_cols=273 Identities=10% Similarity=0.027 Sum_probs=215.0
Q ss_pred ChhhHHhHHhhhhcCCcceeeeccCCCCC--------CCcCCceeEEE-EcCCCCEEEEecCCCCceeeeccCccccCcE
Q 048624 144 TKKHRDKYYDGIDNLDYPGCFAMTELHHG--------SNVQGLQTVAT-FDPIKDEFIINTPNDGAIKWWIGNAAVHGKF 214 (673)
Q Consensus 144 t~eq~~~~l~~i~~g~~~g~~a~TE~~~G--------sd~~~~~TtA~-~d~~~~~~vLntP~~~G~K~~i~~~~~~A~~ 214 (673)
.++|+++|||++.+|++++|+|+|||+.| ||+. +.|+++ ++ +|+|||| |+|+|+|| . .||+
T Consensus 122 ~~eqk~~~L~~l~~Ge~~~a~a~TEP~~grs~~~s~gsd~~-~~~~~~~~~--gdg~Vln-----G~K~~iT~-~-~Ad~ 191 (481)
T 2yyk_A 122 FAENVRNYYRYLRDQDLATTHALTNPQVNRARPPSGQPDPY-IPVGVVKQT--EKGIVVR-----GARMTATF-P-LADE 191 (481)
T ss_dssp GHHHHHHHHHHHHHHTCCEEEEECCCCCCTTC----CCCSC-SBCEEEEEC--SSEEEEE-----EEEEEEEC-C-CSSE
T ss_pred HHHHHHHHHHHHHcCCeEEEEeeECCCCCCCCCccccCCcc-cceEEEEEE--CCEEEEE-----eEEEEecc-c-cccE
Confidence 46999999999999999999999999976 6775 777775 56 8999999 99999999 8 9999
Q ss_pred EEEEEEEecCCCCCCCCCCCceEEEEEeecCCCCCCCCCCeEEe--cCCC--------CccCCC-CCceeEEecceecCc
Q 048624 215 ATVFAKLMLPTHDSKGYSDMGVHAFIVPIRDMKTHQTLPGIEIH--DCGH--------KVGLNG-VDNGALRFCSVRIPR 283 (673)
Q Consensus 215 ~vV~Ar~~~~g~~~~~~~~~g~~~FlV~~rd~~~~~~~pGv~v~--~~~~--------~~G~~~-~~~~~l~fd~v~VP~ 283 (673)
++|+|++....++ ++++++|+||.+ +|||++. +.+. ++|.+. .+++.|.||||+||.
T Consensus 192 ~iV~art~~~~~~-----~~~~s~flVp~d-------tpGv~v~~r~~~~~~~s~~d~~lg~r~~~~~~~v~FddV~VP~ 259 (481)
T 2yyk_A 192 VLIFPSILLQAGS-----EKYALAFALPTS-------TPGLHFVCREALVGGDSPFDHPLSSRVEEMDCLVIFDDVLVPW 259 (481)
T ss_dssp EEECCCSCCCTTC-----GGGCEEEEEETT-------CTTEEEEECCCCCCCSCTTTCTTTTTCCCCEEEEEEEEEEEEG
T ss_pred EEEEEecCCCCCC-----CCeEEEEEEECC-------CCCEEEEeccccccCCccccccccccCCCCeEEEEEccEEECH
Confidence 9999998532111 126899999964 7999995 3332 256664 678899999999999
Q ss_pred ccccccCCcccCCCccccCCcccchHHHHH--HhhHhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCcccccc
Q 048624 284 DNLLNRFGDVSRDGKYTSSLPTINKRFAAT--LGELVGGRVGLAYSSVGVLKIAATIAIRYSLLRQQFGPPRKPEVSILD 361 (673)
Q Consensus 284 ~~lL~~~~~v~~~G~~~~~~~~~~~g~~~~--~~~l~~~rl~~aa~~~G~a~~al~~a~~ya~~R~qfg~~~~~e~~i~~ 361 (673)
+++|+. |. ++.++... ...+..+|+..++..+|.++.++.++.+++.. | + |.+
T Consensus 260 e~vl~~-G~-------------~~~g~~~~~~~~~l~~~r~~~~~~~~g~a~~~lg~a~~~~~~---~--g------i~~ 314 (481)
T 2yyk_A 260 ERVFIL-GN-------------VELCNNAYGATGALNHMAHQVVALKTAKTEAFLGVAALMAEG---I--G------ADV 314 (481)
T ss_dssp GGEEEE-SC-------------HHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---T--T------GGG
T ss_pred HHccCC-CC-------------ccHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHh---c--C------hhh
Confidence 999831 11 34455443 56778999999999999999999999988864 3 3 899
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchhhhHHHHHHhHHHHHHHHHHHHHHHHHHHhCccCccCccc
Q 048624 362 YQSQQHKLMPMLASTYAFHFATANLVEKYSEMKKTHDEQLVGDVHALSAGLKSYVTSYTAKSLSVCREACGGHGYAAVNR 441 (673)
Q Consensus 362 ~q~vq~~La~~~a~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~K~~at~~a~~~~~~~~q~~Gg~Gy~~~~~ 441 (673)
+|.+|++|++|.+.++++ +.+++.+++..+..+..........++++|.++++.+.++++.|+|+|||.|++ .|
T Consensus 315 ~q~vq~~laem~~~leaa----r~l~~~aa~~~d~~~~G~~~~~~~~~s~aK~~a~e~a~~v~~~a~qi~Gg~g~~--~p 388 (481)
T 2yyk_A 315 YGHVQEKIAEIIVYLEAM----RAFWTRAEEEAKENAYGLLVPDRGALDGARNLYPRLYPRIREILEQIGASGLIT--LP 388 (481)
T ss_dssp SHHHHHHHHHHHHHHHHH----HHHHHHHHHTCEECTTSCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGSC--CC
T ss_pred hHHHHHHHHHHHHHHHHH----HHHHHHHHHcccccccCCcCccHHHHHHHHHHHHHHHHHHHHHHHHHhCccccc--Cc
Confidence 999999999999999995 455666677665310000012355789999999999999999999999998887 78
Q ss_pred hhcccccccccc------ccCccHHHHHHHHHHHH
Q 048624 442 FGSLRNDHDIFQ------TFEGDNTVLLQQVAGDL 470 (673)
Q Consensus 442 l~r~~rd~~~~~------~~eG~~~vl~~~ia~~l 470 (673)
++++| +..... ...|.+++.+..++|.+
T Consensus 389 ~e~~~-~~~i~~~l~~~l~~~g~~~~~r~~i~rl~ 422 (481)
T 2yyk_A 389 SEKDF-KGPLGPFLEKFLQGAALEAKERVALFRLA 422 (481)
T ss_dssp CHHHH-HSTTHHHHHHHSCBTTBCHHHHHHHHHHH
T ss_pred cHHHh-ChhhhHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 88888 874322 33599999999999754
No 39
>1u8v_A Gamma-aminobutyrate metabolism dehydratase/isomerase; ALFA-helixes, beta-strands, lyase; HET: FAD; 1.60A {Clostridium aminobutyricum} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=1.9e-33 Score=310.95 Aligned_cols=275 Identities=13% Similarity=0.012 Sum_probs=214.5
Q ss_pred HHhccCC--hhhHHhHHhhhhcCCcceeeeccCCCCC--------CCc-CCceeEEEEcCCCCEEEEecCCCCceeeecc
Q 048624 138 SVINLGT--KKHRDKYYDGIDNLDYPGCFAMTELHHG--------SNV-QGLQTVATFDPIKDEFIINTPNDGAIKWWIG 206 (673)
Q Consensus 138 ~i~~~gt--~eq~~~~l~~i~~g~~~g~~a~TE~~~G--------sd~-~~~~TtA~~d~~~~~~vLntP~~~G~K~~i~ 206 (673)
.+..+|| ++|+++|||++.+|++++|+|+|||+.| ||+ ..++ +|+++ +|+|||| |+|+|+|
T Consensus 119 ~~~~~Gt~~~eqk~~~L~~l~~Ge~~~a~a~TEP~~~rs~~~~~gSD~~~~~~-~a~r~--gdg~vln-----G~K~~iT 190 (490)
T 1u8v_A 119 IDQKYGTNYHKNFTEYLKYIQENDLIVDGAMTDPKGDRGLAPSAQKDPDLFLR-IVEKR--EDGIVVR-----GAKAHQT 190 (490)
T ss_dssp HHHHHCCCHHHHHHHHHHHHHHHTCCEEEECCCCCSCTTSCGGGCSSTTSSCE-EEEEC--SSEEEEE-----EEECSCT
T ss_pred HHHHhCCCHHHHHHHHHHHHHhCCceeeeeeeCCCCCCcccccccCCcccceE-EEEEE--CCEEEEE-----eEEEEee
Confidence 3457999 9999999999999999999999999874 775 4455 88887 8999999 9999999
Q ss_pred CccccCcEEEEEEEEecCCCCCCCCCCCceEEEEEeecCCCCCCCCCCeEEe---cCCCC----------ccC-CC-CCc
Q 048624 207 NAAVHGKFATVFAKLMLPTHDSKGYSDMGVHAFIVPIRDMKTHQTLPGIEIH---DCGHK----------VGL-NG-VDN 271 (673)
Q Consensus 207 ~~~~~A~~~vV~Ar~~~~g~~~~~~~~~g~~~FlV~~rd~~~~~~~pGv~v~---~~~~~----------~G~-~~-~~~ 271 (673)
|+. .||+++|+|++....++. ++.++|+||.+ +|||++. +.+.+ +|+ +. .++
T Consensus 191 ~a~-~Ad~~iV~art~~~~~~~-----~~~s~flVp~d-------~pGv~v~~~r~~~~~~~~~~~~d~~lg~~r~~~~~ 257 (490)
T 1u8v_A 191 GSI-NSHEHIIMPTIAMTEADK-----DYAVSFACPSD-------ADGLFMIYGRQSCDTRKMEEGADIDLGNKQFGGQE 257 (490)
T ss_dssp TCT-TCSEEEECCSSCCCGGGG-----GGCEEEEEETT-------CTTEEEEECCCTTGGGGGSTTCCGGGSSSSCCCCC
T ss_pred CCc-ccCEEEEEEecCCCCCCC-----CeEEEEEEECC-------CCCEEEEecccccccccccccccCCccccccCCce
Confidence 999 999999999975311111 15789999964 7999995 34443 566 53 577
Q ss_pred eeEEecceecCcccccccCCcccCCCccccCCcccchHHHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCC
Q 048624 272 GALRFCSVRIPRDNLLNRFGDVSRDGKYTSSLPTINKRFAATLGELVGGRVGLAYSSVGVLKIAATIAIRYSLLRQQFGP 351 (673)
Q Consensus 272 ~~l~fd~v~VP~~~lL~~~~~v~~~G~~~~~~~~~~~g~~~~~~~l~~~rl~~aa~~~G~a~~al~~a~~ya~~R~qfg~ 351 (673)
+.|.||||+||.+++|+. +. ++.++......+...|+.+++.++|.+..++.++.+.... |
T Consensus 258 ~~v~FddV~VP~e~vl~~-g~-------------~~~g~~~~~~~~~~~r~~~~a~~~~~~~~~lG~a~~~~~~---~-- 318 (490)
T 1u8v_A 258 ALVVFDNVFIPNDRIFLC-QE-------------YDFAGMMVERFAGYHRQSYGGCKVGVGDVVIGAAALAADY---N-- 318 (490)
T ss_dssp EEEEEEEEEEEGGGEEEE-SC-------------GGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---H--
T ss_pred EEEEECceEeCHHHccCC-CC-------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---c--
Confidence 899999999999999831 11 4567766677777888888877777777777766554421 3
Q ss_pred CCCCcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchhhhHHHHHHhHHHHHHHHHHHHHHHHHHHh
Q 048624 352 PRKPEVSILDYQSQQHKLMPMLASTYAFHFATANLVEKYSEMKKTHDEQLVGDVHALSAGLKSYVTSYTAKSLSVCREAC 431 (673)
Q Consensus 352 ~~~~e~~i~~~q~vq~~La~~~a~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~K~~at~~a~~~~~~~~q~~ 431 (673)
+ |.++|.+|++|++|.+.+++++ .+++.+++..+..+..........++++|.++++.+.++++.++|+|
T Consensus 319 g------i~~~q~vq~~laem~~~leaar----~l~~~aa~~~d~~~~g~~~~~~~~~s~aK~~a~e~a~~v~~~a~qi~ 388 (490)
T 1u8v_A 319 G------AQKASHVKDKLIEMTHLNETLY----CCGIACSAEGYPTAAGNYQIDLLLANVCKQNITRFPYEIVRLAEDIA 388 (490)
T ss_dssp T------CTTCHHHHHHHHHHHHHHHHHH----HHHHHHHHTCEECTTSCEECCHHHHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred C------chhcHHHHHHHHHHHHHHHHHH----HHHHHHHHcccccccCCcCccHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 2 8899999999999999999954 55566667665310000012345789999999999999999999999
Q ss_pred CccCccCccchhcccccc-ccccccCccHHHHHH
Q 048624 432 GGHGYAAVNRFGSLRNDH-DIFQTFEGDNTVLLQ 464 (673)
Q Consensus 432 Gg~Gy~~~~~l~r~~rd~-~~~~~~eG~~~vl~~ 464 (673)
||.||+ .|++++|||. +++.++|.....++.
T Consensus 389 Gg~g~~--~p~er~~rd~~~~~~~~~~~~~~l~~ 420 (490)
T 1u8v_A 389 GGLMVT--MPSEADFKSETVVGRDGETIGDFCNK 420 (490)
T ss_dssp CTHHHH--CCCHHHHTCCCBCSTTSCBHHHHHHH
T ss_pred Ccchhc--ChHHHHHhCchhccccchhHHHHHHH
Confidence 999998 8999999998 899999886665544
No 40
>3hwc_A Chlorophenol-4-monooxygenase component 2; beta barrel, helix bundle, oxidoreductase; 2.50A {Burkholderia cepacia}
Probab=99.96 E-value=1.1e-28 Score=272.00 Aligned_cols=244 Identities=11% Similarity=0.049 Sum_probs=176.7
Q ss_pred cCC--hhhHHhHHhhhhcCCcceeeeccCCCC--------CCCcCCceeEEEEcCCCCEEEEecCCCCceeeeccCcccc
Q 048624 142 LGT--KKHRDKYYDGIDNLDYPGCFAMTELHH--------GSNVQGLQTVATFDPIKDEFIINTPNDGAIKWWIGNAAVH 211 (673)
Q Consensus 142 ~gt--~eq~~~~l~~i~~g~~~g~~a~TE~~~--------Gsd~~~~~TtA~~d~~~~~~vLntP~~~G~K~~i~~~~~~ 211 (673)
+|+ .+|+++|||++.+|++++|+|+|||+. |||+ .+.|+ .++ +|+|||| |+|+||||+. .
T Consensus 127 ~~~~~~eq~~~~L~~l~~Ge~~~a~AltEP~~~rs~~~~~GSD~-~~~~~-~~~--gdg~Vln-----G~K~~iT~a~-~ 196 (515)
T 3hwc_A 127 EGRNLTQNIHNFLKLLREKDLNCPLNFVDPQTDRSSDAAQARSP-NLRIV-EKT--DDGIIVN-----GVKAVGTGIA-F 196 (515)
T ss_dssp TTCCHHHHHHHHHHHHHHTTCCCCEECCCCCCCCCSCTTTSCCS-BCEEE-EEC--SSEEEEE-----EEEEEEESGG-G
T ss_pred cCCCHHHHHHHHHHHHHcCCcEEEEEeeCCCCCcccccccCCCc-ceEEE-EEE--CCEEEEE-----EEEEEECCcc-c
Confidence 555 457799999999999999999999986 5888 66654 344 7999999 9999999999 9
Q ss_pred CcEEEEEEEEecCCCCCCCCCCCceEEEEEeecCCCCCCCCCCeEEecCCCCccCC----------CCCceeEEecceec
Q 048624 212 GKFATVFAKLMLPTHDSKGYSDMGVHAFIVPIRDMKTHQTLPGIEIHDCGHKVGLN----------GVDNGALRFCSVRI 281 (673)
Q Consensus 212 A~~~vV~Ar~~~~g~~~~~~~~~g~~~FlV~~rd~~~~~~~pGv~v~~~~~~~G~~----------~~~~~~l~fd~v~V 281 (673)
||+++|+|++....... ++++|+||.+ +|||++...+.++|.+ +..++.|.||||+|
T Consensus 197 Ad~~lV~a~t~~~~~~~------~~s~FlVp~d-------~pGv~v~~~~~~~G~~~~d~~ls~~~~~~~a~v~FddV~V 263 (515)
T 3hwc_A 197 GDYMHIGCLYRPGIPGE------QVIFAAIPTN-------TPGVTVFCRESTVKNDPAEHPLASQGDELDSTTVFDNVFI 263 (515)
T ss_dssp CSEEEECCCCCTTCCGG------GCEEEEEETT-------CTTEEEEECCCCCCSCTTTCTTTTSCCCCEEEEEEEEEEE
T ss_pred cCEEEEEEEecCCCCCC------eEEEEEEECC-------CCCeEEeecccccCccccccccccccCCceEEEEECceEE
Confidence 99999999873222211 4899999964 7999998767766632 12378899999999
Q ss_pred Cccccc--ccCCcccCCCccccCCcccchHHHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCcccc
Q 048624 282 PRDNLL--NRFGDVSRDGKYTSSLPTINKRFAATLGELVGGRVGLAYSSVGVLKIAATIAIRYSLLRQQFGPPRKPEVSI 359 (673)
Q Consensus 282 P~~~lL--~~~~~v~~~G~~~~~~~~~~~g~~~~~~~l~~~rl~~aa~~~G~a~~al~~a~~ya~~R~qfg~~~~~e~~i 359 (673)
|.+++| |. ++.++..++..+...+....+..+|.+..++..+.+++. +|| |
T Consensus 264 P~e~vl~~Ge----------------~g~g~~~~~~~~~~~~r~~~~~~~~~a~~~lG~A~~~~e---~~g--------I 316 (515)
T 3hwc_A 264 PWEQVFHIGN----------------PEHAKLYPQRIFDWVHYHILIRQVLRAELIVGLAILITE---HIG--------T 316 (515)
T ss_dssp EGGGEEEESC----------------TTGGGTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHT--------C
T ss_pred CHHHccCCCC----------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HcC--------C
Confidence 999999 44 344444443333333211112334444444544444432 232 8
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchhhhHHHHHHhHHHHHHHHHHHHHHHHHHHhCccCccCc
Q 048624 360 LDYQSQQHKLMPMLASTYAFHFATANLVEKYSEMKKTHDEQLVGDVHALSAGLKSYVTSYTAKSLSVCREACGGHGYAAV 439 (673)
Q Consensus 360 ~~~q~vq~~La~~~a~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~K~~at~~a~~~~~~~~q~~Gg~Gy~~~ 439 (673)
.+||.+|++|++|.+.+++++ .+++.+++..+.............++++|.++++.+.++++.++|+|||.+++..
T Consensus 317 ~~fQ~Vq~kLAem~~~lEaaR----~l~~~Aa~~~d~~~~G~~~p~~~~as~AK~~ase~~~rv~~~a~qi~GG~~i~~P 392 (515)
T 3hwc_A 317 SKLPTVSARVAKLVAFHLAMQ----AHLIASEETGFHTKGGRYKPNPLIYDFGRAHFLQNQMSVMYELLDLAGRSSLMIP 392 (515)
T ss_dssp TTSHHHHHHHHHHHHHHHHHH----HHHHHHHHTCEECTTCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGTSCC
T ss_pred cccHHHHHHHHHHHHHHHHHH----HHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeeeCC
Confidence 999999999999999999954 5556666766541100001234568999999999999999999999999999853
No 41
>4g5e_A 2,4,6-trichlorophenol 4-monooxygenase; oxidoreductase; 2.50A {Cupriavidus necator JMP134}
Probab=99.89 E-value=9.2e-22 Score=217.35 Aligned_cols=241 Identities=10% Similarity=0.028 Sum_probs=177.7
Q ss_pred hHHhHHhhhhcCCcceeeeccCCCCCCC-----cC--CceeEEEEcCCCCEEEEecCCCCceeeeccCccccCcEEEEEE
Q 048624 147 HRDKYYDGIDNLDYPGCFAMTELHHGSN-----VQ--GLQTVATFDPIKDEFIINTPNDGAIKWWIGNAAVHGKFATVFA 219 (673)
Q Consensus 147 q~~~~l~~i~~g~~~g~~a~TE~~~Gsd-----~~--~~~TtA~~d~~~~~~vLntP~~~G~K~~i~~~~~~A~~~vV~A 219 (673)
...+|+..+.+.++..+.++|.|...-. .. .+.. ..++ ++||||| |.|.|+||++ .||+++|++
T Consensus 135 n~~~y~~~~~~~DL~~~~a~~dPk~dRs~~~~~q~d~~l~V-ve~~--~dGiVVn-----GaK~~~T~a~-~Ad~i~V~a 205 (517)
T 4g5e_A 135 NIVDFVNFAKKHDLNCAPQFVDPQMDRSNPDAQQRSPGLRV-IEKN--DKGIVVS-----GVKAIGTGVA-FADWIHIGV 205 (517)
T ss_dssp HHHHHHHHHHHHTCCEEEECCCCCC-----------CBCEE-EEEC--SSEEEEE-----EEEEEEESGG-GCSEEEECC
T ss_pred HHHHHHHHHHhcCceeeeeeeCCCCCCCCCchhcCCCceEE-EEEc--CCeEEEe-----eEehhhcCcc-ccCEEEEEe
Confidence 4567999999999999999999963211 11 1322 2333 6899999 9999999999 999999999
Q ss_pred EEecCCCCCCCCCCCceEEEEEeecCCCCCCCCCCeEEecCCCCccCCCCC----------ceeEEecceecCccccccc
Q 048624 220 KLMLPTHDSKGYSDMGVHAFIVPIRDMKTHQTLPGIEIHDCGHKVGLNGVD----------NGALRFCSVRIPRDNLLNR 289 (673)
Q Consensus 220 r~~~~g~~~~~~~~~g~~~FlV~~rd~~~~~~~pGv~v~~~~~~~G~~~~~----------~~~l~fd~v~VP~~~lL~~ 289 (673)
++....+. ++...|+||.+ +|||++.......+.+..+ .+.|.||||+||.++++..
T Consensus 206 ~t~~~~~~------d~~~~F~VP~d-------tPGv~~i~r~~~~~~~~~d~pl~~r~~e~da~vvFDdV~VP~e~Vf~~ 272 (517)
T 4g5e_A 206 FFRPGIPG------DQIIFAATPVN-------TPGVTIVCRESVVKEDPIEHPLASQGDELDGMTVFDNVFIPWSHVFHL 272 (517)
T ss_dssp CCCTTCCG------GGCEEEEEETT-------CTTEEEEECCCCCCSCTTTCTTGGGCCCCEEEEEEEEEEEEGGGEEEE
T ss_pred ecCCCCCc------cceEEEEEecC-------CCCeEEEecccccCCCccccccccccCCcceEEEecceeccHHHcccc
Confidence 87643332 27889999964 7999985443333333222 3779999999999998732
Q ss_pred CCcccCCCccccCCcccchHHHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCcccccccHHHHHHH
Q 048624 290 FGDVSRDGKYTSSLPTINKRFAATLGELVGGRVGLAYSSVGVLKIAATIAIRYSLLRQQFGPPRKPEVSILDYQSQQHKL 369 (673)
Q Consensus 290 ~~~v~~~G~~~~~~~~~~~g~~~~~~~l~~~rl~~aa~~~G~a~~al~~a~~ya~~R~qfg~~~~~e~~i~~~q~vq~~L 369 (673)
|+ ++.++......+...|...++..++.++.++..+..++.. +| |.+||.||++|
T Consensus 273 -Ge-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~~~ae~---~G--------i~~fq~Vq~kL 327 (517)
T 4g5e_A 273 -GN-------------PEHAKLYPQRVFDWLHYHALIRQSVRAELMAGLAILITEH---IG--------TNKIPAVQTRV 327 (517)
T ss_dssp -SC-------------TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HT--------CTTSHHHHHHH
T ss_pred -CC-------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hC--------CcccHHHHHHH
Confidence 11 4566666777788888888888889999999999888853 33 88999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCcchhhhHHHHHHhHHHHHHHHHHHHHHHHHHHhCccCccC
Q 048624 370 MPMLASTYAFHFATANLVEKYSEMKKTHDEQLVGDVHALSAGLKSYVTSYTAKSLSVCREACGGHGYAA 438 (673)
Q Consensus 370 a~~~a~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~K~~at~~a~~~~~~~~q~~Gg~Gy~~ 438 (673)
++|.+.+++++++ ...++............+....++++|.++++...+++.+++|++||.|++.
T Consensus 328 aEm~~~~E~~ral----~~aaa~~a~~~~~G~~~P~~~~a~~aK~~a~~~~~rv~~eaiqi~GG~g~~~ 392 (517)
T 4g5e_A 328 AKLIGFHQAMLAH----IVASEELGFHTPGGAYKPNILIYDFGRALYLENFSQMIYELVDLSGRSALIF 392 (517)
T ss_dssp HHHHHHHHHHHHH----HHHHHHTCEECTTCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTTCC
T ss_pred HHHHHHHHHHHHH----HHHHHHhcccCCCCCcCcCHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccC
Confidence 9999999996544 3333332221110011122457889999999999999999999999999984
No 42
>3owa_A Acyl-COA dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-structure, beta-barrel; HET: MSE FAD 1PE; 1.97A {Bacillus anthracis}
Probab=82.10 E-value=10 Score=42.32 Aligned_cols=124 Identities=9% Similarity=0.022 Sum_probs=73.9
Q ss_pred HHHHHHHHHHHHhhhccccCCCCCCcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchhhhHHHHHH
Q 048624 331 VLKIAATIAIRYSLLRQQFGPPRKPEVSILDYQSQQHKLMPMLASTYAFHFATANLVEKYSEMKKTHDEQLVGDVHALSA 410 (673)
Q Consensus 331 ~a~~al~~a~~ya~~R~qfg~~~~~e~~i~~~q~vq~~La~~~a~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 410 (673)
.++..+..++.++.+| +|+. |.+.|.+..+|+++.+.+|+|.++..+....+.. .+. +.......
T Consensus 466 ~~~~~~~~~~~~~~~~--~~~~------~~~~q~~l~~~ad~~~~~y~~~~~~~r~~~~~~~---~~~----~~~~~~~~ 530 (597)
T 3owa_A 466 NAKKIGLMVAGLAAQK--YGKA------LDKEQEILVNIADIVSNLYAMESAVLRTEKAIKT---TGL----EKNKQKVL 530 (597)
T ss_dssp HHHHHHHHHHHHHHHH--HGGG------GGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HCS----GGGHHHHH
T ss_pred HHHHHHHHHHHHHHHH--hCCc------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh---cCc----cchHHHHH
Confidence 3334444455555444 3444 8999999999999999999988765444332221 121 23345677
Q ss_pred hHHHHHHHHHHHHHHHHHHHhCccCccCccchhccccccccccccCccH-HHHHHHHHHHHH
Q 048624 411 GLKSYVTSYTAKSLSVCREACGGHGYAAVNRFGSLRNDHDIFQTFEGDN-TVLLQQVAGDLL 471 (673)
Q Consensus 411 ~~K~~at~~a~~~~~~~~q~~Gg~Gy~~~~~l~r~~rd~~~~~~~eG~~-~vl~~~ia~~ll 471 (673)
++++||.+...++-..+.++. ..+.....+..++..++-+.-+...| .-++.+||+.++
T Consensus 531 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 590 (597)
T 3owa_A 531 YTEVFCQEAFNEIEAHAKETL--IAVENGDMLRMMLSSLRKLTRHTPLNVIPKKREIAAKIL 590 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH--HHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH--HhhccchHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHH
Confidence 899999999999999988887 33333333333333333333232222 233445555554
No 43
>2uxw_A VERY-long-chain specific acyl-COA dehydrogenase; fatty acid metabolism, transit peptide, disease mutation, LI metabolism, coenzyme A dehydrogenase; HET: FAD TH3; 1.45A {Homo sapiens} PDB: 3b96_A*
Probab=51.70 E-value=97 Score=34.32 Aligned_cols=67 Identities=10% Similarity=-0.013 Sum_probs=46.5
Q ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchhhhHHHHHHhHHHHHHHHHHHHHHHHHHHhCc
Q 048624 359 ILDYQSQQHKLMPMLASTYAFHFATANLVEKYSEMKKTHDEQLVGDVHALSAGLKSYVTSYTAKSLSVCREACGG 433 (673)
Q Consensus 359 i~~~q~vq~~La~~~a~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~K~~at~~a~~~~~~~~q~~Gg 433 (673)
+.+.|.+..||+++...+|++..+. .++.+..+.+. +........++.|+.+...++-..+.++..+
T Consensus 510 ~~~~~~~~~rl~d~~~~~y~~~~~l----~r~~~~~~~g~----~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 576 (607)
T 2uxw_A 510 IVNEQFLLQRLADGAIDLYAMVVVL----SRASRSLSEGH----PTAQHEKMLCDTWCIEAAARIREGMAALQSD 576 (607)
T ss_dssp GGGCHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHTC----TTHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHhCCC----cchHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 8888999999999999999865543 33333333331 2223346778999988888888888775543
No 44
>2caz_B Vacuolar protein sorting-associated protein VPS28; protein transport, ESCRT, MVB, multivesicular bodies, endosome, lysosome, PH domain, protein sorting; 3.6A {Saccharomyces cerevisiae} SCOP: a.2.17.2
Probab=20.72 E-value=1.6e+02 Score=26.05 Aligned_cols=56 Identities=9% Similarity=0.150 Sum_probs=37.6
Q ss_pred HHHHcCC---CccHHHHHHHHHHHHhhHhhhhccccccccCcCChhhHHHHHHHHHHHHHHh
Q 048624 577 EAVQNCP---DPSSRAALKLVCDLYALNRIWNDIGTYRNVDYVAPNKAKAIHKLTEYLSFQV 635 (673)
Q Consensus 577 ~~i~~~~---~~~~~~vL~~L~~Lyal~~i~~~~~~~~~~~~ls~~~~~~l~~~~~~l~~~l 635 (673)
+.|.-.. ++.-|++...|+.||++-.-.+.+.--+-...|++++ -..+..+|+.+.
T Consensus 28 eEVkL~~~~~s~~ERe~yE~LAeLYSII~tLE~LEKAYikD~It~~e---YT~aC~rLL~QY 86 (155)
T 2caz_B 28 DEVPLFDNSITSKDKEVIETLSEIYSIVITLDHVEKAYLKDSIDDTQ---YTNTVDKLLKQF 86 (155)
T ss_dssp ---CCSCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSCHHH---HHHHHHHHHHHH
T ss_pred ceeehhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHH---HHHHHHHHHHHH
Confidence 4565555 7888999999999999888777776555568888876 334444444433
Done!