Your job contains 1 sequence.
>048626
MRIVRKDLIPNGPRSVKMIPVDSDDLWFAYNLVAGKDPFLAITLRKVVRQTKSGGKDAEW
VKLKSEIWWPSLSGKLYDKEGSIKNILENEYFFESVLHAFLKHVDFNVVRCAEISPGFTE
NQCHLHLLLEAEEVLYASSVMNMIKDTKAAQEVQHVEVAHQRMAVQTLHITDDLFRNTAI
ATRKKYVDLVNSVKDSGGTAHVFSSMSQGNLGQLTGVAAILRFPLPNLTKNDKCSMKCMK
ENIVPEQGCRKFNCIEDVTS
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 048626
(260 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2137732 - symbol:PEL1 "AT4G27650" species:3702... 257 1.2e-57 3
TAIR|locus:2085465 - symbol:AT3G58390 "AT3G58390" species... 250 3.2e-41 3
UNIPROTKB|Q58DV0 - symbol:PELO "Protein pelota homolog" s... 211 5.8e-34 3
RGD|1359591 - symbol:Pelo "pelota homolog (Drosophila)" s... 210 7.9e-34 3
UNIPROTKB|Q5ZK01 - symbol:PELO "Protein pelota homolog" s... 209 1.0e-33 3
MGI|MGI:2145154 - symbol:Pelo "pelota homolog (Drosophila... 210 1.6e-33 3
UNIPROTKB|F2Z5N9 - symbol:PELO "Uncharacterized protein" ... 207 4.7e-33 3
UNIPROTKB|Q9BRX2 - symbol:PELO "Protein pelota homolog" s... 208 5.8e-33 3
FB|FBgn0011207 - symbol:pelo "pelota" species:7227 "Droso... 199 1.3e-32 3
ZFIN|ZDB-GENE-040426-1074 - symbol:pelo "pelota homolog (... 189 1.0e-30 3
DICTYBASE|DDB_G0280447 - symbol:pelo "putative translatio... 195 3.1e-28 3
UNIPROTKB|H9L2N7 - symbol:PELO "Protein pelota homolog" s... 164 1.5e-24 3
UNIPROTKB|H9L2N8 - symbol:PELO "Protein pelota homolog" s... 165 1.6e-24 3
CGD|CAL0001484 - symbol:orf19.2419 species:5476 "Candida ... 153 8.6e-16 3
POMBASE|SPCC18B5.06 - symbol:SPCC18B5.06 "peloto ortholog... 146 1.0e-14 2
ASPGD|ASPL0000072701 - symbol:AN4530 species:162425 "Emer... 112 7.1e-12 3
GENEDB_PFALCIPARUM|MAL7P1.118 - symbol:MAL7P1.118 "PelOta... 146 7.3e-12 2
SGD|S000004946 - symbol:DOM34 "Protein that facilitates r... 146 2.0e-11 2
>TAIR|locus:2137732 [details] [associations]
symbol:PEL1 "AT4G27650" species:3702 "Arabidopsis
thaliana" [GO:0003747 "translation release factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006415
"translational termination" evidence=ISS] [GO:0007126 "meiosis"
evidence=ISS] InterPro:IPR004405 Pfam:PF03465 Pfam:PF03463
Pfam:PF03464 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161571
HOGENOM:HOG000184162 KO:K06965 OMA:MKLVRKD InterPro:IPR005140
InterPro:IPR005141 InterPro:IPR005142 PANTHER:PTHR10853
TIGRFAMs:TIGR00111 EMBL:AL035602 ProtClustDB:CLSN2684722
EMBL:AF069497 EMBL:AY074298 EMBL:AY096569 IPI:IPI00527200
PIR:T05870 RefSeq:NP_194495.3 UniGene:At.2803
ProteinModelPortal:Q9ZT87 SMR:Q9ZT87 STRING:Q9ZT87 PRIDE:Q9ZT87
EnsemblPlants:AT4G27650.1 GeneID:828876 KEGG:ath:AT4G27650
TAIR:At4g27650 InParanoid:Q9ZT87 PhylomeDB:Q9ZT87
Genevestigator:Q9ZT87 Uniprot:Q9ZT87
Length = 378
Score = 257 (95.5 bits), Expect = 1.2e-57, Sum P(3) = 1.2e-57
Identities = 55/91 (60%), Positives = 70/91 (76%)
Query: 142 NMI--KDTKAAQEVQHVEVAHQRMAVQTLHITDDLFRNTAIATRKKYVDLVNSVKDSGGT 199
NM+ + +A +HVEVA++RMA+QTL ITD+LFRN+ + TRKKYV+LV SVKDSGG
Sbjct: 283 NMLSTEPDRACYGPKHVEVANERMAIQTLLITDELFRNSDVKTRKKYVNLVESVKDSGGD 342
Query: 200 AHVFSSM--SQGNLGQLTGVAAILRFPLPNL 228
A +FS+M S L QLTG+AA+LRFPLP L
Sbjct: 343 AFIFSAMHVSGEQLAQLTGIAALLRFPLPEL 373
Score = 245 (91.3 bits), Expect = 1.2e-57, Sum P(3) = 1.2e-57
Identities = 52/103 (50%), Positives = 68/103 (66%)
Query: 1 MRIVRKDLIPNGPRSVKMIPVDSDDLWFAYNLVAGKDPFLAITLRKVVRQTKSGGKDAEW 60
M+IVR+D + NGP SVKM+ DSDDLW+AYNL+A D +A+T RKV R+ GG+D+E
Sbjct: 1 MKIVRRDFVRNGPGSVKMVAEDSDDLWYAYNLIAVGDSVMAVTFRKVQREIPGGGRDSER 60
Query: 61 VKLKSEIWWPSLSGKLYDKEGSI-----KNILENEYFFESVLH 98
VKLK E+ + YDK+GS+ KNILENE+ H
Sbjct: 61 VKLKLEVQVEEVD---YDKDGSVLRIRGKNILENEHVKIGAFH 100
Score = 120 (47.3 bits), Expect = 1.2e-57, Sum P(3) = 1.2e-57
Identities = 23/32 (71%), Positives = 29/32 (90%)
Query: 92 FFESVLHAFLKHVDFNVVRCAEI-SPGFTENQ 122
FFE+VL AF+KHVDF+VVRCA + SPGFT++Q
Sbjct: 185 FFENVLQAFVKHVDFSVVRCAVVASPGFTKDQ 216
Score = 76 (31.8 bits), Expect = 2.2e-38, Sum P(3) = 2.2e-38
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 136 YASSVMNMIKDTKAAQEVQHVEVAHQRMAVQ 166
+A +VMNMIKDTKAA+EV+ + H ++ +
Sbjct: 258 HAPNVMNMIKDTKAAKEVKALNDFHNMLSTE 288
>TAIR|locus:2085465 [details] [associations]
symbol:AT3G58390 "AT3G58390" species:3702 "Arabidopsis
thaliana" [GO:0003747 "translation release factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006415
"translational termination" evidence=ISS] InterPro:IPR004405
Pfam:PF03465 Pfam:PF03463 Pfam:PF03464 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL137081 eggNOG:COG1537
HOGENOM:HOG000184162 KO:K06965 InterPro:IPR005140
InterPro:IPR005141 InterPro:IPR005142 PANTHER:PTHR10853
TIGRFAMs:TIGR00111 IPI:IPI00536939 PIR:T45999 RefSeq:NP_191398.1
UniGene:At.65292 ProteinModelPortal:Q9M2H7 SMR:Q9M2H7 PRIDE:Q9M2H7
EnsemblPlants:AT3G58390.1 GeneID:825008 KEGG:ath:AT3G58390
TAIR:At3g58390 InParanoid:Q9M2H7 OMA:NIMENEH PhylomeDB:Q9M2H7
ProtClustDB:CLSN2684722 Genevestigator:Q9M2H7 Uniprot:Q9M2H7
Length = 395
Score = 250 (93.1 bits), Expect = 3.2e-41, Sum P(3) = 3.2e-41
Identities = 53/83 (63%), Positives = 63/83 (75%)
Query: 148 KAAQEVQHVEVAHQRMAVQTLHITDDLFRNTAIATRKKYVDLVNSVKDSGGTAHVFSSM- 206
+A +HVEVAH+RMA+QTL I D LFRN+ + TRKKYVD V SVKDSGG +FSSM
Sbjct: 308 RACYGPKHVEVAHERMAIQTLLIIDGLFRNSDVKTRKKYVDFVESVKDSGGEVFIFSSMH 367
Query: 207 SQGN-LGQLTGVAAILRFPLPNL 228
+ G L Q TG+AAILRFPLP+L
Sbjct: 368 ASGEQLAQHTGIAAILRFPLPDL 390
Score = 156 (60.0 bits), Expect = 3.2e-41, Sum P(3) = 3.2e-41
Identities = 28/47 (59%), Positives = 36/47 (76%)
Query: 1 MRIVRKDLIPNGPRSVKMIPVDSDDLWFAYNLVAGKDPFLAITLRKV 47
M+I+RKD + NGP SVKM+ DSDDLW+ YNL+ +D +AIT RKV
Sbjct: 1 MKIIRKDFVRNGPGSVKMMAEDSDDLWYTYNLIGPEDSVMAITFRKV 47
Score = 134 (52.2 bits), Expect = 6.2e-39, Sum P(3) = 6.2e-39
Identities = 41/103 (39%), Positives = 60/103 (58%)
Query: 24 DDLWFAYNLVAGKDPFLAITL-RKVVRQTKSGGKDAE--WVKLKSEIWWPSLSGKLYDKE 80
D L A +L A D LA+ L ++ + Q GK + ++K+ I W +G
Sbjct: 140 DTLKQASDLAASAD--LAVVLMQEGLAQIFLAGKSVKSCGARIKTSIPWKHGAGT----- 192
Query: 81 GSIKNILENEYFFESVLHAFLKHVDFNVVRCAEI-SPGFTENQ 122
+++L+ FFE+V+ AFLKHVDF+VVRCA I SPGFT++Q
Sbjct: 193 AGYESVLKK--FFENVVQAFLKHVDFSVVRCAVIASPGFTKDQ 233
Score = 65 (27.9 bits), Expect = 3.2e-41, Sum P(3) = 3.2e-41
Identities = 13/16 (81%), Positives = 16/16 (100%)
Query: 139 SVMNMIKDTKAAQEVQ 154
+VMNMIKDTKAA+EV+
Sbjct: 278 NVMNMIKDTKAAKEVK 293
Score = 58 (25.5 bits), Expect = 4.8e-31, Sum P(3) = 4.8e-31
Identities = 23/71 (32%), Positives = 35/71 (49%)
Query: 35 GKD--PFLAITLRKVVRQTKSGGKDAEWVKLKSEIWWPSLSGKLYDKEGSI-----KNIL 87
G+D P L+ K + + +S + E VKLK E+ + YDK+G + KNI+
Sbjct: 51 GRDSTPSLSRIESKYLGKKRSFTR-TERVKLKLEVQVEEVD---YDKDGDVMRIRGKNIM 106
Query: 88 ENEYFFESVLH 98
ENE+ H
Sbjct: 107 ENEHVRIGAFH 117
>UNIPROTKB|Q58DV0 [details] [associations]
symbol:PELO "Protein pelota homolog" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0051276 "chromosome organization" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0004519 "endonuclease activity"
evidence=IEA] InterPro:IPR004405 Pfam:PF03465 Pfam:PF03463
Pfam:PF03464 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0008283 GO:GO:0090305 GO:GO:0004519 GO:GO:0051276
eggNOG:COG1537 KO:K06965 OMA:MKLVRKD InterPro:IPR005140
InterPro:IPR005141 InterPro:IPR005142 PANTHER:PTHR10853
TIGRFAMs:TIGR00111 GeneTree:ENSGT00390000016326 EMBL:BT021497
EMBL:BT025367 IPI:IPI00706801 RefSeq:NP_001029738.1
UniGene:Bt.76149 ProteinModelPortal:Q58DV0 SMR:Q58DV0 STRING:Q58DV0
Ensembl:ENSBTAT00000004233 GeneID:528728 KEGG:bta:528728 CTD:53918
HOVERGEN:HBG053560 InParanoid:Q58DV0 OrthoDB:EOG498V0Z
NextBio:20874887 Uniprot:Q58DV0
Length = 385
Score = 211 (79.3 bits), Expect = 5.8e-34, Sum P(3) = 5.8e-34
Identities = 46/92 (50%), Positives = 66/92 (71%)
Query: 148 KAAQEVQHVEVAHQRMAVQTLHITDDLFRNTAIATRKKYVDLVNSVKDSGGTAHVFSSM- 206
+A ++ VE A++ MA+ TL I+D+LFR+ +ATR +YV LV+SVK++ GT +FSS+
Sbjct: 291 RAFYGLKQVEKANEAMAIDTLLISDELFRHQDVATRSRYVRLVDSVKENAGTVRIFSSLH 350
Query: 207 -SQGNLGQLTGVAAILRFPLPNLT--KNDKCS 235
S L QLTG+AAILRFP+P L+ +ND S
Sbjct: 351 VSGEQLSQLTGIAAILRFPVPELSDQENDSSS 382
Score = 116 (45.9 bits), Expect = 5.8e-34, Sum P(3) = 5.8e-34
Identities = 29/100 (29%), Positives = 49/100 (49%)
Query: 1 MRIVRKDLIPNGPRSVKMIPVDSDDLWFAYNLVAGKDPFLAITLRKVVRQTKSGGKDAEW 60
M++VRKD+ + V ++P + +D+W YNLV D A T+RKV ++ +G +
Sbjct: 1 MKLVRKDIEKDNAGQVTLVPEEPEDMWHTYNLVQVGDSLRASTIRKVQTESSTGSVGSNR 60
Query: 61 VKLKSEIWWPSLSGKLYDKEGSIK--NILENEYFFESVLH 98
V+ + ++ + +K NI ENEY H
Sbjct: 61 VRTTLTLCVEAIDFDSQACQLRVKGTNIQENEYVKMGAYH 100
Score = 81 (33.6 bits), Expect = 5.8e-34, Sum P(3) = 5.8e-34
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 90 EYFFESVLHAFLKHVDFNVVRCAEI-SPGFTENQ 122
E F+E V+ A +H+ F+VV+C + SPGF Q
Sbjct: 183 ERFYEQVVQAIQRHIHFDVVKCVLVASPGFVREQ 216
Score = 39 (18.8 bits), Expect = 1.5e-09, Sum P(3) = 1.5e-09
Identities = 8/19 (42%), Positives = 14/19 (73%)
Query: 139 SVMNMIKDTKAAQEVQHVE 157
+V + + DTKAA EV+ ++
Sbjct: 261 TVASRLSDTKAAGEVKALD 279
>RGD|1359591 [details] [associations]
symbol:Pelo "pelota homolog (Drosophila)" species:10116 "Rattus
norvegicus" [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA;ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0051276 "chromosome organization"
evidence=IEA;ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR004405 RGD:1359591 Pfam:PF03465 Pfam:PF03463
Pfam:PF03464 GO:GO:0005634 GO:GO:0005737 GO:GO:0051301
GO:GO:0046872 GO:GO:0008283 GO:GO:0007049 GO:GO:0090305
GO:GO:0004519 GO:GO:0051276 eggNOG:COG1537 HOGENOM:HOG000184162
KO:K06965 OMA:MKLVRKD InterPro:IPR005140 InterPro:IPR005141
InterPro:IPR005142 PANTHER:PTHR10853 TIGRFAMs:TIGR00111
GeneTree:ENSGT00390000016326 CTD:53918 HOVERGEN:HBG053560
OrthoDB:EOG498V0Z EMBL:BC083637 IPI:IPI00190373
RefSeq:NP_001007635.1 UniGene:Rn.3842 ProteinModelPortal:Q5XIP1
SMR:Q5XIP1 IntAct:Q5XIP1 STRING:Q5XIP1 PhosphoSite:Q5XIP1
PRIDE:Q5XIP1 Ensembl:ENSRNOT00000032223 GeneID:294754
KEGG:rno:294754 InParanoid:Q5XIP1 NextBio:638529
Genevestigator:Q5XIP1 GermOnline:ENSRNOG00000023127 Uniprot:Q5XIP1
Length = 385
Score = 210 (79.0 bits), Expect = 7.9e-34, Sum P(3) = 7.9e-34
Identities = 44/87 (50%), Positives = 64/87 (73%)
Query: 148 KAAQEVQHVEVAHQRMAVQTLHITDDLFRNTAIATRKKYVDLVNSVKDSGGTAHVFSSM- 206
+A ++ VE A++ +A+ TL I+D+LFR+ +ATR +YV LV+SVK++ GT +FSS+
Sbjct: 291 RAFYGLKQVERANEALAIDTLLISDELFRHQDVATRSRYVRLVDSVKENAGTVRIFSSLH 350
Query: 207 -SQGNLGQLTGVAAILRFPLPNLTKND 232
S LGQLTGVAAILRFP+P L+ +
Sbjct: 351 VSGEQLGQLTGVAAILRFPVPELSDQE 377
Score = 116 (45.9 bits), Expect = 7.9e-34, Sum P(3) = 7.9e-34
Identities = 29/100 (29%), Positives = 49/100 (49%)
Query: 1 MRIVRKDLIPNGPRSVKMIPVDSDDLWFAYNLVAGKDPFLAITLRKVVRQTKSGGKDAEW 60
M++VRKD+ + V ++P + +D+W YNLV D A T+RKV ++ +G +
Sbjct: 1 MKLVRKDIEKDNAGQVTLVPEEPEDMWHTYNLVQVGDSLRASTIRKVQTESSTGSVGSNR 60
Query: 61 VKLKSEIWWPSLSGKLYDKEGSIK--NILENEYFFESVLH 98
V+ + ++ + +K NI ENEY H
Sbjct: 61 VRTTLTLCVEAIDFDSQACQLRVKGTNIQENEYVKMGAYH 100
Score = 81 (33.6 bits), Expect = 7.9e-34, Sum P(3) = 7.9e-34
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 90 EYFFESVLHAFLKHVDFNVVRCAEI-SPGFTENQ 122
E F+E V+ A +H++F VV+C + SPGF Q
Sbjct: 183 ERFYEQVVQAIQRHINFEVVKCILVASPGFVREQ 216
Score = 39 (18.8 bits), Expect = 1.5e-09, Sum P(3) = 1.5e-09
Identities = 8/19 (42%), Positives = 14/19 (73%)
Query: 139 SVMNMIKDTKAAQEVQHVE 157
+V + + DTKAA EV+ ++
Sbjct: 261 TVASRLSDTKAAGEVKALD 279
>UNIPROTKB|Q5ZK01 [details] [associations]
symbol:PELO "Protein pelota homolog" species:9031 "Gallus
gallus" [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR004405 Pfam:PF03465 Pfam:PF03463
Pfam:PF03464 GO:GO:0005634 GO:GO:0005737 GO:GO:0051301
GO:GO:0046872 GO:GO:0007049 GO:GO:0090305 GO:GO:0004519
eggNOG:COG1537 HOGENOM:HOG000184162 KO:K06965 InterPro:IPR005140
InterPro:IPR005141 InterPro:IPR005142 PANTHER:PTHR10853
TIGRFAMs:TIGR00111 CTD:53918 HOVERGEN:HBG053560 OrthoDB:EOG498V0Z
EMBL:AJ720283 IPI:IPI00595899 RefSeq:NP_001026763.1
UniGene:Gga.22260 ProteinModelPortal:Q5ZK01 SMR:Q5ZK01
STRING:Q5ZK01 GeneID:430689 KEGG:gga:430689 InParanoid:Q5ZK01
NextBio:20830536 Uniprot:Q5ZK01
Length = 385
Score = 209 (78.6 bits), Expect = 1.0e-33, Sum P(3) = 1.0e-33
Identities = 46/91 (50%), Positives = 67/91 (73%)
Query: 148 KAAQEVQHVEVAHQRMAVQTLHITDDLFRNTAIATRKKYVDLVNSVKDSGGTAHVFSSM- 206
+A ++HVE A++ MA+ TL I+D+LFR+ +ATR +YV LV+SV+++ GT +FSS+
Sbjct: 291 RAFYGLKHVEKANEAMAIDTLLISDELFRHQDVATRARYVKLVDSVRENMGTVRIFSSLH 350
Query: 207 -SQGNLGQLTGVAAILRFPLPNLT-KNDKCS 235
S LGQLTGVAAILRFP+ L+ + D+ S
Sbjct: 351 VSGEQLGQLTGVAAILRFPVAELSDQEDESS 381
Score = 115 (45.5 bits), Expect = 1.0e-33, Sum P(3) = 1.0e-33
Identities = 29/100 (29%), Positives = 49/100 (49%)
Query: 1 MRIVRKDLIPNGPRSVKMIPVDSDDLWFAYNLVAGKDPFLAITLRKVVRQTKSGGKDAEW 60
M++VRKDL + V +IP + +D+W YNL+ D A T+RKV ++ +G +
Sbjct: 1 MKLVRKDLEKDNAGQVTLIPEEPEDMWHTYNLLQVGDSLRASTIRKVQTESSTGSVGSNR 60
Query: 61 VKLKSEIWWPSLSGKLYDKEGSIK--NILENEYFFESVLH 98
++ + ++ + +K NI ENEY H
Sbjct: 61 IRTTLTLCVEAIDFDSQACQLRVKGTNIQENEYVKMGAYH 100
Score = 82 (33.9 bits), Expect = 1.0e-33, Sum P(3) = 1.0e-33
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 90 EYFFESVLHAFLKHVDFNVVRCAEI-SPGFTENQ 122
E F+E V+ A +H++F VV+C + SPGF Q
Sbjct: 183 ERFYEQVVQAIQRHINFEVVKCVLVASPGFVREQ 216
Score = 39 (18.8 bits), Expect = 1.6e-09, Sum P(3) = 1.6e-09
Identities = 8/19 (42%), Positives = 14/19 (73%)
Query: 139 SVMNMIKDTKAAQEVQHVE 157
+V + + DTKAA EV+ ++
Sbjct: 261 AVTSRLSDTKAAGEVKALD 279
>MGI|MGI:2145154 [details] [associations]
symbol:Pelo "pelota homolog (Drosophila)" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0004518
"nuclease activity" evidence=IEA] [GO:0004519 "endonuclease
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IMP] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051276 "chromosome organization" evidence=IMP]
[GO:0051301 "cell division" evidence=IEA] InterPro:IPR004405
MGI:MGI:2145154 Pfam:PF03465 Pfam:PF03463 Pfam:PF03464
GO:GO:0005634 GO:GO:0005737 GO:GO:0051301 GO:GO:0046872
GO:GO:0008283 GO:GO:0007049 GO:GO:0090305 GO:GO:0004519
GO:GO:0051276 eggNOG:COG1537 HOGENOM:HOG000184162 KO:K06965
OMA:MKLVRKD InterPro:IPR005140 InterPro:IPR005141
InterPro:IPR005142 PANTHER:PTHR10853 TIGRFAMs:TIGR00111
GeneTree:ENSGT00390000016326 CTD:53918 HOVERGEN:HBG053560
OrthoDB:EOG498V0Z EMBL:AF148638 EMBL:AF148639 EMBL:AK170635
EMBL:BC050209 EMBL:BC057160 IPI:IPI00457959 RefSeq:NP_598819.2
UniGene:Mm.486295 ProteinModelPortal:Q80X73 SMR:Q80X73
STRING:Q80X73 PhosphoSite:Q80X73 PaxDb:Q80X73 PRIDE:Q80X73
Ensembl:ENSMUST00000109226 GeneID:105083 KEGG:mmu:105083
InParanoid:Q3TCN0 NextBio:357428 Bgee:Q80X73 CleanEx:MM_PELO
Genevestigator:Q80X73 GermOnline:ENSMUSG00000042275 Uniprot:Q80X73
Length = 385
Score = 210 (79.0 bits), Expect = 1.6e-33, Sum P(3) = 1.6e-33
Identities = 44/87 (50%), Positives = 64/87 (73%)
Query: 148 KAAQEVQHVEVAHQRMAVQTLHITDDLFRNTAIATRKKYVDLVNSVKDSGGTAHVFSSM- 206
+A ++ VE A++ +A+ TL I+D+LFR+ +ATR +YV LV+SVK++ GT +FSS+
Sbjct: 291 RAFYGLKQVERANEALAIDTLLISDELFRHQDVATRSRYVRLVDSVKENAGTVRIFSSLH 350
Query: 207 -SQGNLGQLTGVAAILRFPLPNLTKND 232
S LGQLTGVAAILRFP+P L+ +
Sbjct: 351 VSGEQLGQLTGVAAILRFPVPELSDQE 377
Score = 112 (44.5 bits), Expect = 1.6e-33, Sum P(3) = 1.6e-33
Identities = 28/100 (28%), Positives = 49/100 (49%)
Query: 1 MRIVRKDLIPNGPRSVKMIPVDSDDLWFAYNLVAGKDPFLAITLRKVVRQTKSGGKDAEW 60
M++VRKD+ + V ++P + +D+W +NLV D A T+RKV ++ +G +
Sbjct: 1 MKLVRKDIEKDNAGQVTLVPEEPEDMWHTFNLVQVGDSLRASTIRKVQTESSTGSVGSNR 60
Query: 61 VKLKSEIWWPSLSGKLYDKEGSIK--NILENEYFFESVLH 98
V+ + ++ + +K NI ENEY H
Sbjct: 61 VRTTLTLCVEAIDFDSQACQLRVKGTNIQENEYVKMGAYH 100
Score = 82 (33.9 bits), Expect = 1.6e-33, Sum P(3) = 1.6e-33
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 90 EYFFESVLHAFLKHVDFNVVRCAEI-SPGFTENQ 122
E F+E V+ A +H++F VV+C + SPGF Q
Sbjct: 183 ERFYEQVVQAIQRHINFEVVKCVLVASPGFVREQ 216
Score = 39 (18.8 bits), Expect = 3.9e-09, Sum P(3) = 3.9e-09
Identities = 8/19 (42%), Positives = 14/19 (73%)
Query: 139 SVMNMIKDTKAAQEVQHVE 157
+V + + DTKAA EV+ ++
Sbjct: 261 TVASRLSDTKAAGEVKALD 279
>UNIPROTKB|F2Z5N9 [details] [associations]
symbol:PELO "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051276 "chromosome organization" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] InterPro:IPR004405
Pfam:PF03465 Pfam:PF03463 Pfam:PF03464 GO:GO:0008283 GO:GO:0051276
KO:K06965 OMA:MKLVRKD InterPro:IPR005140 InterPro:IPR005141
InterPro:IPR005142 PANTHER:PTHR10853 TIGRFAMs:TIGR00111
GeneTree:ENSGT00390000016326 EMBL:CU463114 RefSeq:XP_003133983.1
UniGene:Ssc.28731 Ensembl:ENSSSCT00000018388 GeneID:100511788
KEGG:ssc:100511788 Uniprot:F2Z5N9
Length = 385
Score = 207 (77.9 bits), Expect = 4.7e-33, Sum P(3) = 4.7e-33
Identities = 43/87 (49%), Positives = 63/87 (72%)
Query: 148 KAAQEVQHVEVAHQRMAVQTLHITDDLFRNTAIATRKKYVDLVNSVKDSGGTAHVFSSM- 206
+A ++ VE A++ MA+ TL I+D+LFR+ +ATR +YV LV+SVK++ GT +FSS+
Sbjct: 291 RAFYGLKQVEKANEAMAIDTLLISDELFRHQDVATRSRYVRLVDSVKENAGTVRIFSSLH 350
Query: 207 -SQGNLGQLTGVAAILRFPLPNLTKND 232
S L QLTG+AAILRFP+P L+ +
Sbjct: 351 VSGEQLSQLTGIAAILRFPVPELSDQE 377
Score = 116 (45.9 bits), Expect = 4.7e-33, Sum P(3) = 4.7e-33
Identities = 29/100 (29%), Positives = 49/100 (49%)
Query: 1 MRIVRKDLIPNGPRSVKMIPVDSDDLWFAYNLVAGKDPFLAITLRKVVRQTKSGGKDAEW 60
M++VRKD+ + V ++P + +D+W YNLV D A T+RKV ++ +G +
Sbjct: 1 MKLVRKDIEKDNAGQVTLVPEEPEDMWHTYNLVQVGDSLRASTIRKVQTESSTGSVGSNR 60
Query: 61 VKLKSEIWWPSLSGKLYDKEGSIK--NILENEYFFESVLH 98
V+ + ++ + +K NI ENEY H
Sbjct: 61 VRTTLTLCVEAIDFDSQACQLRVKGTNIQENEYVKMGAYH 100
Score = 77 (32.2 bits), Expect = 4.7e-33, Sum P(3) = 4.7e-33
Identities = 14/34 (41%), Positives = 21/34 (61%)
Query: 90 EYFFESVLHAFLKHVDFNVVRCAEI-SPGFTENQ 122
E F+E V+ +H+ F+VV+C + SPGF Q
Sbjct: 183 ERFYEQVVQGIQRHIHFDVVKCVLVASPGFVREQ 216
Score = 39 (18.8 bits), Expect = 3.8e-09, Sum P(3) = 3.8e-09
Identities = 8/19 (42%), Positives = 14/19 (73%)
Query: 139 SVMNMIKDTKAAQEVQHVE 157
+V + + DTKAA EV+ ++
Sbjct: 261 TVASRLSDTKAAGEVKALD 279
>UNIPROTKB|Q9BRX2 [details] [associations]
symbol:PELO "Protein pelota homolog" species:9606 "Homo
sapiens" [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0051276
"chromosome organization" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR004405 Pfam:PF03465 Pfam:PF03463 Pfam:PF03464
GO:GO:0005634 GO:GO:0005737 GO:GO:0051301 GO:GO:0046872
GO:GO:0008283 GO:GO:0007049 GO:GO:0090305 GO:GO:0004519
GO:GO:0051276 eggNOG:COG1537 HOGENOM:HOG000184162 KO:K06965
OMA:MKLVRKD InterPro:IPR005140 InterPro:IPR005141
InterPro:IPR005142 PANTHER:PTHR10853 TIGRFAMs:TIGR00111
UniGene:Hs.644352 GermOnline:ENSG00000152684 CTD:53918
HOVERGEN:HBG053560 OrthoDB:EOG498V0Z EMBL:AF139828 EMBL:AF143952
EMBL:AY117399 EMBL:AF132951 EMBL:AC026230 EMBL:BC005889
EMBL:BC007249 EMBL:BC007650 EMBL:BC022789 IPI:IPI00106698
RefSeq:NP_057030.3 PDB:1X52 PDBsum:1X52 ProteinModelPortal:Q9BRX2
SMR:Q9BRX2 IntAct:Q9BRX2 MINT:MINT-3372932 STRING:Q9BRX2
PhosphoSite:Q9BRX2 DMDM:54036246 PaxDb:Q9BRX2 PRIDE:Q9BRX2
DNASU:53918 Ensembl:ENST00000274311 GeneID:53918 KEGG:hsa:53918
UCSC:uc003jos.3 GeneCards:GC05P052084 H-InvDB:HIX0004852
HGNC:HGNC:8829 HPA:HPA031458 MIM:605757 neXtProt:NX_Q9BRX2
PharmGKB:PA33174 InParanoid:Q9BRX2 EvolutionaryTrace:Q9BRX2
GenomeRNAi:53918 NextBio:56232 Bgee:Q9BRX2 CleanEx:HS_PELO
Genevestigator:Q9BRX2 Uniprot:Q9BRX2
Length = 385
Score = 208 (78.3 bits), Expect = 5.8e-33, Sum P(3) = 5.8e-33
Identities = 44/87 (50%), Positives = 63/87 (72%)
Query: 148 KAAQEVQHVEVAHQRMAVQTLHITDDLFRNTAIATRKKYVDLVNSVKDSGGTAHVFSSM- 206
+A ++ VE A++ MA+ TL I+D+LFR+ +ATR +YV LV+SVK++ GT +FSS+
Sbjct: 291 RAFYGLKQVEKANEAMAIDTLLISDELFRHQDVATRSRYVRLVDSVKENAGTVRIFSSLH 350
Query: 207 -SQGNLGQLTGVAAILRFPLPNLTKND 232
S L QLTGVAAILRFP+P L+ +
Sbjct: 351 VSGEQLSQLTGVAAILRFPVPELSDQE 377
Score = 111 (44.1 bits), Expect = 5.8e-33, Sum P(3) = 5.8e-33
Identities = 28/100 (28%), Positives = 49/100 (49%)
Query: 1 MRIVRKDLIPNGPRSVKMIPVDSDDLWFAYNLVAGKDPFLAITLRKVVRQTKSGGKDAEW 60
M++VRK++ + V ++P + +D+W YNLV D A T+RKV ++ +G +
Sbjct: 1 MKLVRKNIEKDNAGQVTLVPEEPEDMWHTYNLVQVGDSLRASTIRKVQTESSTGSVGSNR 60
Query: 61 VKLKSEIWWPSLSGKLYDKEGSIK--NILENEYFFESVLH 98
V+ + ++ + +K NI ENEY H
Sbjct: 61 VRTTLTLCVEAIDFDSQACQLRVKGTNIQENEYVKMGAYH 100
Score = 80 (33.2 bits), Expect = 5.8e-33, Sum P(3) = 5.8e-33
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 90 EYFFESVLHAFLKHVDFNVVRCAEI-SPGFTENQ 122
E F+E V+ A +H+ F+VV+C + SPGF Q
Sbjct: 183 ERFYEQVVQAIQRHIHFDVVKCILVASPGFVREQ 216
Score = 39 (18.8 bits), Expect = 8.1e-09, Sum P(3) = 8.1e-09
Identities = 8/19 (42%), Positives = 14/19 (73%)
Query: 139 SVMNMIKDTKAAQEVQHVE 157
+V + + DTKAA EV+ ++
Sbjct: 261 TVASRLSDTKAAGEVKALD 279
>FB|FBgn0011207 [details] [associations]
symbol:pelo "pelota" species:7227 "Drosophila melanogaster"
[GO:0007283 "spermatogenesis" evidence=NAS;IMP] [GO:0007140 "male
meiosis" evidence=IMP] [GO:0001745 "compound eye morphogenesis"
evidence=IMP] [GO:0051078 "meiotic nuclear envelope disassembly"
evidence=IMP] [GO:0048137 "spermatocyte division" evidence=IMP]
[GO:0000212 "meiotic spindle organization" evidence=IMP]
[GO:0007126 "meiosis" evidence=IMP] [GO:0006412 "translation"
evidence=ISS] [GO:0008315 "meiotic G2/MI transition" evidence=TAS]
[GO:0007141 "male meiosis I" evidence=TAS] [GO:0048749 "compound
eye development" evidence=NAS] [GO:0007054 "spindle assembly
involved in male meiosis I" evidence=NAS] [GO:0005634 "nucleus"
evidence=NAS] [GO:0007067 "mitosis" evidence=NAS] [GO:0048132
"female germ-line stem cell division" evidence=IMP] [GO:0030718
"germ-line stem cell maintenance" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR004405 Pfam:PF03465
Pfam:PF03463 Pfam:PF03464 GO:GO:0005634 GO:GO:0005737 GO:GO:0007067
EMBL:AE014134 GO:GO:0046872 GO:GO:0090305 GO:GO:0004519
GO:GO:0030718 GO:GO:0048132 GO:GO:0008315 GO:GO:0048137
GO:GO:0007141 GO:GO:0001745 eggNOG:COG1537 KO:K06965 OMA:MKLVRKD
InterPro:IPR005140 InterPro:IPR005141 InterPro:IPR005142
PANTHER:PTHR10853 TIGRFAMs:TIGR00111 GeneTree:ENSGT00390000016326
GO:GO:0000212 CTD:53918 EMBL:U27197 EMBL:AY058644 PIR:T47122
RefSeq:NP_476982.1 UniGene:Dm.4742 ProteinModelPortal:P48612
SMR:P48612 IntAct:P48612 MINT:MINT-936154 STRING:P48612
PaxDb:P48612 EnsemblMetazoa:FBtr0079847 GeneID:34286
KEGG:dme:Dmel_CG3959 UCSC:CG3959-RA FlyBase:FBgn0011207
InParanoid:P48612 OrthoDB:EOG4QBZMW PhylomeDB:P48612
GenomeRNAi:34286 NextBio:787756 Bgee:P48612 GermOnline:CG3959
GO:GO:0051078 Uniprot:P48612
Length = 395
Score = 199 (75.1 bits), Expect = 1.3e-32, Sum P(3) = 1.3e-32
Identities = 43/95 (45%), Positives = 63/95 (66%)
Query: 140 VMNMIKDTKAAQEVQHVEVAHQRMAVQTLHITDDLFRNTAIATRKKYVDLVNSVKDSGGT 199
+M + KA +HV A + A++TL I+D+LFR ++ RK+YV+LV S++D+GG
Sbjct: 283 MMLQCEPAKAFYGKKHVLQAAESQAIETLLISDNLFRCQDVSLRKEYVNLVESIRDAGGE 342
Query: 200 AHVFSSM--SQGNLGQLTGVAAILRFPLPNLTKND 232
+FSSM S L QLTG+AA+LRFP+P L +D
Sbjct: 343 VKIFSSMHISGEQLAQLTGIAALLRFPMPELEDSD 377
Score = 112 (44.5 bits), Expect = 1.3e-32, Sum P(3) = 1.3e-32
Identities = 29/103 (28%), Positives = 52/103 (50%)
Query: 1 MRIVRKDLIPNGPRSVKMIPVDSDDLWFAYNLVAGKDPFLAITLRKVVRQTKSGGKDAEW 60
M+++ K + +V ++P +S+D+W AYNL+A D + T+RKV +T +G +
Sbjct: 1 MKLLGKYVDKGMQGNVTLVPEESEDMWHAYNLIAKGDSVRSTTIRKVQNETATGSSTSSR 60
Query: 61 VKLKSEIWWPSLSGKLYDKEGSI-----KNILENEYFFESVLH 98
V+ I S+ +D + + +NI EN+Y H
Sbjct: 61 VRTTLTIAVESID---FDTQACVLRLKGRNIEENQYVKMGAYH 100
Score = 87 (35.7 bits), Expect = 1.3e-32, Sum P(3) = 1.3e-32
Identities = 16/32 (50%), Positives = 24/32 (75%)
Query: 92 FFESVLHAFLKHVDFNVVRCAEI-SPGFTENQ 122
F+E V+ + L+HV+F+VV+C I SPGF +Q
Sbjct: 185 FYEQVMQSILRHVNFDVVKCVLIASPGFVRDQ 216
Score = 41 (19.5 bits), Expect = 8.6e-10, Sum P(3) = 8.6e-10
Identities = 9/19 (47%), Positives = 14/19 (73%)
Query: 139 SVMNMIKDTKAAQEVQHVE 157
+V+ + DTKAA EV+ +E
Sbjct: 261 AVLAKMSDTKAAGEVKALE 279
>ZFIN|ZDB-GENE-040426-1074 [details] [associations]
symbol:pelo "pelota homolog (Drosophila)"
species:7955 "Danio rerio" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0004518 "nuclease activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0004519 "endonuclease activity"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR004405 Pfam:PF03465 Pfam:PF03463 Pfam:PF03464
ZFIN:ZDB-GENE-040426-1074 GO:GO:0005634 GO:GO:0005737 GO:GO:0051301
GO:GO:0046872 GO:GO:0007049 GO:GO:0090305 GO:GO:0004519
eggNOG:COG1537 HOGENOM:HOG000184162 KO:K06965 OMA:MKLVRKD
InterPro:IPR005140 InterPro:IPR005141 InterPro:IPR005142
PANTHER:PTHR10853 TIGRFAMs:TIGR00111 GeneTree:ENSGT00390000016326
CTD:53918 HOVERGEN:HBG053560 OrthoDB:EOG498V0Z EMBL:BC049484
IPI:IPI00499709 RefSeq:NP_957430.1 UniGene:Dr.75205
ProteinModelPortal:Q7ZWC4 SMR:Q7ZWC4 STRING:Q7ZWC4 PRIDE:Q7ZWC4
Ensembl:ENSDART00000077829 GeneID:394111 KEGG:dre:394111
InParanoid:Q7ZWC4 NextBio:20815065 Bgee:Q7ZWC4 Uniprot:Q7ZWC4
Length = 385
Score = 189 (71.6 bits), Expect = 1.0e-30, Sum P(3) = 1.0e-30
Identities = 41/90 (45%), Positives = 64/90 (71%)
Query: 148 KAAQEVQHVEVAHQRMAVQTLHITDDLFRNTAIATRKKYVDLVNSVKDSGGTAHVFSSM- 206
+A + HVE A + +A+ L I+D LFR+ +ATR +YV LV++VK++GGT +FSS+
Sbjct: 291 RAFYGLAHVERASEALAIDILLISDTLFRHQDVATRGRYVRLVDNVKENGGTVRIFSSLH 350
Query: 207 -SQGNLGQLTGVAAILRFPLPNLTKNDKCS 235
S L QL+GVAAILRFP+ ++++ ++ S
Sbjct: 351 VSGEQLNQLSGVAAILRFPIADVSEPEENS 380
Score = 107 (42.7 bits), Expect = 1.0e-30, Sum P(3) = 1.0e-30
Identities = 27/100 (27%), Positives = 49/100 (49%)
Query: 1 MRIVRKDLIPNGPRSVKMIPVDSDDLWFAYNLVAGKDPFLAITLRKVVRQTKSGGKDAEW 60
M++V KD+ + V +IP +++D+W YNL+ D A T+RKV ++ +G +
Sbjct: 1 MKLVHKDIEKDNAGQVTLIPDEAEDMWHTYNLLQVGDSLRASTIRKVQTESSTGSVGSSR 60
Query: 61 VKLKSEIWWPSLSGKLYDKEGSIK--NILENEYFFESVLH 98
V+ + ++ + +K NI EN+Y H
Sbjct: 61 VRTTLTLCVETIDFDSQACQLRVKGTNIQENQYVKMGAYH 100
Score = 84 (34.6 bits), Expect = 1.0e-30, Sum P(3) = 1.0e-30
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 90 EYFFESVLHAFLKHVDFNVVRCAEI-SPGFTENQ 122
E F+E+V+ L+H +F+VV+C + SPGF ++Q
Sbjct: 183 ERFYEAVMQGILRHFNFDVVKCILVASPGFVKDQ 216
Score = 39 (18.8 bits), Expect = 9.9e-09, Sum P(3) = 9.9e-09
Identities = 9/19 (47%), Positives = 13/19 (68%)
Query: 139 SVMNMIKDTKAAQEVQHVE 157
+V + DTKAA EV+ +E
Sbjct: 261 AVTARLSDTKAAGEVKALE 279
>DICTYBASE|DDB_G0280447 [details] [associations]
symbol:pelo "putative translation factor"
species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0006412 "translation"
evidence=IDA] InterPro:IPR004405 dictyBase:DDB_G0280447
Pfam:PF03465 Pfam:PF03463 Pfam:PF03464 GenomeReviews:CM000152_GR
GO:GO:0006412 EMBL:AAFI02000036 eggNOG:COG1537 KO:K06965
OMA:MKLVRKD InterPro:IPR005140 InterPro:IPR005141
InterPro:IPR005142 PANTHER:PTHR10853 TIGRFAMs:TIGR00111
RefSeq:XP_641181.1 ProteinModelPortal:Q54VC8 SMR:Q54VC8
STRING:Q54VC8 EnsemblProtists:DDB0237594 GeneID:8622562
KEGG:ddi:DDB_G0280447 InParanoid:Q54VC8 ProtClustDB:CLSZ2729060
Uniprot:Q54VC8
Length = 441
Score = 195 (73.7 bits), Expect = 3.1e-28, Sum P(3) = 3.1e-28
Identities = 43/84 (51%), Positives = 60/84 (71%)
Query: 145 KD-TKAAQEVQHVEVAHQRMAVQTLHITDDLFRNTAIATRKKYVDLVNSVKDSGGTAHVF 203
KD +A +HV+ A++R+A++TL +TD+LFR + TRKKYVDLV SVKD+ G +F
Sbjct: 288 KDPNRAFYGYEHVKKANERLAIETLLVTDELFRGKDVKTRKKYVDLVQSVKDNKGDVKLF 347
Query: 204 SSMS-QGN-LGQLTGVAAILRFPL 225
S + G L +L+GVAAILR+PL
Sbjct: 348 SGLHVTGEQLSKLSGVAAILRYPL 371
Score = 98 (39.6 bits), Expect = 3.1e-28, Sum P(3) = 3.1e-28
Identities = 24/86 (27%), Positives = 46/86 (53%)
Query: 1 MRIVRKDLIPNGPRSVKMIPVDSDDLWFAYNLVAGKDPFLAITLRKVVRQTKSGGKDAEW 60
M++++K + + VK+ + +DLW YNL++ D + T+RK+ ++T +G +E
Sbjct: 1 MKLIKKYIEKDLSGYVKLQLEEEEDLWHCYNLISVGDLLTSSTVRKIQKETATGSVTSER 60
Query: 61 VKLKSEIWWPSLSGKLYDKEGSIKNI 86
KLK I + +D E S+ +
Sbjct: 61 QKLKITIQVTKID---HDNESSLLRV 83
Score = 67 (28.6 bits), Expect = 3.1e-28, Sum P(3) = 3.1e-28
Identities = 14/37 (37%), Positives = 26/37 (70%)
Query: 87 LENEYFFESVLHAFLKHVDFNVVRCAEI-SPGFTENQ 122
LEN FF ++L + ++++F+VV+C I SP F +++
Sbjct: 182 LEN--FFNTILQSMTRNINFDVVKCFIIASPAFVKDK 216
>UNIPROTKB|H9L2N7 [details] [associations]
symbol:PELO "Protein pelota homolog" species:9031 "Gallus
gallus" [GO:0008283 "cell proliferation" evidence=IEA] [GO:0051276
"chromosome organization" evidence=IEA] InterPro:IPR004405
Pfam:PF03465 Pfam:PF03463 Pfam:PF03464 InterPro:IPR005140
InterPro:IPR005141 InterPro:IPR005142 PANTHER:PTHR10853
TIGRFAMs:TIGR00111 GeneTree:ENSGT00390000016326 EMBL:AADN02022275
Ensembl:ENSGALT00000035958 Uniprot:H9L2N7
Length = 361
Score = 164 (62.8 bits), Expect = 1.5e-24, Sum P(3) = 1.5e-24
Identities = 35/71 (49%), Positives = 52/71 (73%)
Query: 148 KAAQEVQHVEVAHQRMAVQTLHITDDLFRNTAIATRKKYVDLVNSVKDSGGTAHVFSSM- 206
+A ++HVE A++ MA+ TL I+D+LFR+ +ATR +YV LV+SV+++ GT +FSS+
Sbjct: 291 RAFYGLKHVEKANEAMAIDTLLISDELFRHQDVATRARYVKLVDSVRENMGTVRIFSSLH 350
Query: 207 -SQGNLGQLTG 216
S LGQLTG
Sbjct: 351 VSGEQLGQLTG 361
Score = 115 (45.5 bits), Expect = 1.5e-24, Sum P(3) = 1.5e-24
Identities = 29/100 (29%), Positives = 49/100 (49%)
Query: 1 MRIVRKDLIPNGPRSVKMIPVDSDDLWFAYNLVAGKDPFLAITLRKVVRQTKSGGKDAEW 60
M++VRKDL + V +IP + +D+W YNL+ D A T+RKV ++ +G +
Sbjct: 1 MKLVRKDLEKDNAGQVTLIPEEPEDMWHTYNLLQVGDSLRASTIRKVQTESSTGSVGSNR 60
Query: 61 VKLKSEIWWPSLSGKLYDKEGSIK--NILENEYFFESVLH 98
++ + ++ + +K NI ENEY H
Sbjct: 61 IRTTLTLCVEAIDFDSQACQLRVKGTNIQENEYVKMGAYH 100
Score = 82 (33.9 bits), Expect = 1.5e-24, Sum P(3) = 1.5e-24
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 90 EYFFESVLHAFLKHVDFNVVRCAEI-SPGFTENQ 122
E F+E V+ A +H++F VV+C + SPGF Q
Sbjct: 183 ERFYEQVVQAIQRHINFEVVKCVLVASPGFVREQ 216
Score = 39 (18.8 bits), Expect = 1.2e-09, Sum P(3) = 1.2e-09
Identities = 8/19 (42%), Positives = 14/19 (73%)
Query: 139 SVMNMIKDTKAAQEVQHVE 157
+V + + DTKAA EV+ ++
Sbjct: 261 AVTSRLSDTKAAGEVKALD 279
>UNIPROTKB|H9L2N8 [details] [associations]
symbol:PELO "Protein pelota homolog" species:9031 "Gallus
gallus" [GO:0008283 "cell proliferation" evidence=IEA] [GO:0051276
"chromosome organization" evidence=IEA] InterPro:IPR004405
Pfam:PF03465 Pfam:PF03463 Pfam:PF03464 OMA:MKLVRKD
InterPro:IPR005140 InterPro:IPR005141 InterPro:IPR005142
PANTHER:PTHR10853 TIGRFAMs:TIGR00111 GeneTree:ENSGT00390000016326
EMBL:AADN02022275 Ensembl:ENSGALT00000035959 Uniprot:H9L2N8
Length = 384
Score = 165 (63.1 bits), Expect = 1.6e-24, Sum P(3) = 1.6e-24
Identities = 38/80 (47%), Positives = 55/80 (68%)
Query: 148 KAAQEVQHVEVAHQRMAVQTLHITDDLFRNTAIATRKKYVDLVNSVKDSGGTAHVFSSM- 206
+A ++HVE A++ MA+ TL I+D+LFR+ +ATR +YV LV+SV+++ GT +FSS+
Sbjct: 291 RAFYGLKHVEKANEAMAIDTLLISDELFRHQDVATRARYVKLVDSVRENMGTVRIFSSLH 350
Query: 207 -SQGNLGQLTGVAA-ILRFP 224
S LGQLTG IL P
Sbjct: 351 VSGEQLGQLTGGGQPILALP 370
Score = 115 (45.5 bits), Expect = 1.6e-24, Sum P(3) = 1.6e-24
Identities = 29/100 (29%), Positives = 49/100 (49%)
Query: 1 MRIVRKDLIPNGPRSVKMIPVDSDDLWFAYNLVAGKDPFLAITLRKVVRQTKSGGKDAEW 60
M++VRKDL + V +IP + +D+W YNL+ D A T+RKV ++ +G +
Sbjct: 1 MKLVRKDLEKDNAGQVTLIPEEPEDMWHTYNLLQVGDSLRASTIRKVQTESSTGSVGSNR 60
Query: 61 VKLKSEIWWPSLSGKLYDKEGSIK--NILENEYFFESVLH 98
++ + ++ + +K NI ENEY H
Sbjct: 61 IRTTLTLCVEAIDFDSQACQLRVKGTNIQENEYVKMGAYH 100
Score = 82 (33.9 bits), Expect = 1.6e-24, Sum P(3) = 1.6e-24
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 90 EYFFESVLHAFLKHVDFNVVRCAEI-SPGFTENQ 122
E F+E V+ A +H++F VV+C + SPGF Q
Sbjct: 183 ERFYEQVVQAIQRHINFEVVKCVLVASPGFVREQ 216
Score = 39 (18.8 bits), Expect = 1.6e-09, Sum P(3) = 1.6e-09
Identities = 8/19 (42%), Positives = 14/19 (73%)
Query: 139 SVMNMIKDTKAAQEVQHVE 157
+V + + DTKAA EV+ ++
Sbjct: 261 AVTSRLSDTKAAGEVKALD 279
>CGD|CAL0001484 [details] [associations]
symbol:orf19.2419 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0043022 "ribosome binding" evidence=IEA] [GO:0004521
"endoribonuclease activity" evidence=IEA] [GO:0070966
"nuclear-transcribed mRNA catabolic process, no-go decay"
evidence=IEA] [GO:0070651 "nonfunctional rRNA decay" evidence=IEA]
[GO:0000294 "nuclear-transcribed mRNA catabolic process,
endonucleolytic cleavage-dependent decay" evidence=IEA] [GO:0070317
"negative regulation of G0 to G1 transition" evidence=IEA]
[GO:0032790 "ribosome disassembly" evidence=IEA] InterPro:IPR004405
CGD:CAL0001484 Pfam:PF03465 Pfam:PF03463 Pfam:PF03464
EMBL:AACQ01000131 EMBL:AACQ01000130 eggNOG:COG1537 KO:K06965
InterPro:IPR005140 InterPro:IPR005141 InterPro:IPR005142
PANTHER:PTHR10853 TIGRFAMs:TIGR00111 RefSeq:XP_713252.1
RefSeq:XP_713305.1 ProteinModelPortal:Q59UE5 STRING:Q59UE5
GeneID:3645089 GeneID:3645105 KEGG:cal:CaO19.2419
KEGG:cal:CaO19.9957 Uniprot:Q59UE5
Length = 393
Score = 153 (58.9 bits), Expect = 8.6e-16, Sum P(3) = 8.6e-16
Identities = 32/90 (35%), Positives = 54/90 (60%)
Query: 146 DTKAAQEVQHVEVAHQRMAVQTLHITDDLFRNTAIATRKKYVDLVNSVKDSGGTAHVFSS 205
D +A ++ + A AV+ L ++D LFR+ I R+ Y+DL K G ++FSS
Sbjct: 302 DGRAWYGLEEITKALNMDAVRYLMVSDALFRSDDIEERRHYIDLTEQAKTLGAKVYIFSS 361
Query: 206 MSQGN--LGQLTGVAAILRFPLPNLTKNDK 233
+ + L QLTG+AA+L++P+P+L +D+
Sbjct: 362 LHESGEQLNQLTGIAALLKYPIPDLDDSDE 391
Score = 83 (34.3 bits), Expect = 8.6e-16, Sum P(3) = 8.6e-16
Identities = 20/67 (29%), Positives = 36/67 (53%)
Query: 1 MRIVRKDLIPNGPRSVKMIPVDSDDLWFAYNLVAGKDPFLAITLRKVVRQTKSGGKDAEW 60
M++ K + + ++ ++P DS+DLW+ YNL+ D +T R V + G A+
Sbjct: 1 MQVKNKAKLKDKNVAITLVPEDSEDLWYLYNLLKRGDTVQLVTHRNVKK-----GNQAQI 55
Query: 61 VKLKSEI 67
K KS++
Sbjct: 56 TKGKSKM 62
Score = 49 (22.3 bits), Expect = 8.6e-16, Sum P(3) = 8.6e-16
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 92 FFESVLHAFLKHVDFNVVRCAEI-SPGF 118
FF ++ + +H DF ++ + SPGF
Sbjct: 190 FFNMIISSMTRHFDFEKLKVVILASPGF 217
>POMBASE|SPCC18B5.06 [details] [associations]
symbol:SPCC18B5.06 "peloto ortholog (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0000294
"nuclear-transcribed mRNA catabolic process, endonucleolytic
cleavage-dependent decay" evidence=ISO] [GO:0004519 "endonuclease
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IC] [GO:0005829 "cytosol"
evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0070317 "negative regulation of G0 to G1 transition"
evidence=IMP] PomBase:SPCC18B5.06 InterPro:IPR004405 Pfam:PF03465
Pfam:PF03463 Pfam:PF03464 GO:GO:0005829 GO:GO:0005634 GO:GO:0007126
GO:GO:0070317 GO:GO:0051301 GO:GO:0007067 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0046872 GO:GO:0090305 GO:GO:0004519
PIR:T41199 RefSeq:NP_587936.1 PDB:3MCA PDBsum:3MCA
ProteinModelPortal:Q9USL5 DIP:DIP-59038N STRING:Q9USL5
EnsemblFungi:SPCC18B5.06.1 GeneID:2539371 KEGG:spo:SPCC18B5.06
eggNOG:COG1537 HOGENOM:HOG000184162 KO:K06965 OMA:MKLVRKD
OrthoDB:EOG469V3K EvolutionaryTrace:Q9USL5 NextBio:20800536
GO:GO:0000294 InterPro:IPR005140 InterPro:IPR005141
InterPro:IPR005142 PANTHER:PTHR10853 TIGRFAMs:TIGR00111
Uniprot:Q9USL5
Length = 390
Score = 146 (56.5 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 38/88 (43%), Positives = 53/88 (60%)
Query: 140 VMNMIKDTKAAQEVQHVEVAHQRMAVQTLHITDDLFRNTAIATRKKYVDLVNSVKDSGGT 199
VMN D KA HV A + A+ L I+D LFR++ IATRKK+V LV VK+
Sbjct: 284 VMNE-DDRKAWYGPNHVLKAFELGAIGELLISDSLFRSSDIATRKKWVSLVEGVKEINCP 342
Query: 200 AHVFSSMSQGN--LGQLTGVAAILRFPL 225
++FSS+ + L L+G+AAIL +P+
Sbjct: 343 VYIFSSLHESGKQLDLLSGIAAILTYPV 370
Score = 101 (40.6 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 20/67 (29%), Positives = 37/67 (55%)
Query: 1 MRIVRKDLIPNGPRSVKMIPVDSDDLWFAYNLVAGKDPFLAITLRKVVRQTKSGGKDAEW 60
M++++K++ NG + M P + +D+W YN++ D A T+R+VV+ +G
Sbjct: 1 MKLIQKNIEKNGSGWITMCPEEPEDMWHLYNILQVGDQLKASTVRRVVKVGATGSTSGSR 60
Query: 61 VKLKSEI 67
V +K I
Sbjct: 61 VVMKLRI 67
>ASPGD|ASPL0000072701 [details] [associations]
symbol:AN4530 species:162425 "Emericella nidulans"
[GO:0070317 "negative regulation of G0 to G1 transition"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0006412 "translation" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
InterPro:IPR004405 Pfam:PF03465 Pfam:PF03463 Pfam:PF03464
EMBL:BN001303 EMBL:AACD01000078 eggNOG:COG1537 HOGENOM:HOG000184162
KO:K06965 OMA:MKLVRKD OrthoDB:EOG469V3K InterPro:IPR005140
InterPro:IPR005141 InterPro:IPR005142 PANTHER:PTHR10853
TIGRFAMs:TIGR00111 RefSeq:XP_662134.1 ProteinModelPortal:Q5B4K0
STRING:Q5B4K0 EnsemblFungi:CADANIAT00005909 GeneID:2872328
KEGG:ani:AN4530.2 Uniprot:Q5B4K0
Length = 403
Score = 112 (44.5 bits), Expect = 7.1e-12, Sum P(3) = 7.1e-12
Identities = 38/96 (39%), Positives = 54/96 (56%)
Query: 145 KDT-KAAQEVQHVEVAHQRMAVQT----LHITDDLFRNTAIATRKKYVDLVNSVKD-SGG 198
K+T KA + VE A ++ AV L I++ LFR+ IA RK++V LV+ V+D GG
Sbjct: 306 KETNKATYGPREVENAVEQGAVGRGGGILIISNRLFRSQDIAERKRWVALVDRVRDVEGG 365
Query: 199 TAHVFSSMSQGN--LGQLTGVAAILRFPLPNLTKND 232
V SS + L L G+AAIL FP+ + + D
Sbjct: 366 EVRVLSSEHESGKRLDGLGGIAAILTFPISDDLEED 401
Score = 104 (41.7 bits), Expect = 7.1e-12, Sum P(3) = 7.1e-12
Identities = 24/68 (35%), Positives = 36/68 (52%)
Query: 1 MRIVRKDLIPNGPRSVKMIPVDSDDLWFAYNLVAGKDPFLAITLRKVVRQTKS-GGKDAE 59
MR+V+ + G SV +IP + +D+W AYNL+ D A +R+V S G +
Sbjct: 1 MRLVKNKIEYGGAGSVTLIPEEPEDMWHAYNLIVPGDLLYATAIRRVTTTAASTGSTSSS 60
Query: 60 WVKLKSEI 67
V+L EI
Sbjct: 61 RVRLTLEI 68
Score = 45 (20.9 bits), Expect = 7.1e-12, Sum P(3) = 7.1e-12
Identities = 6/17 (35%), Positives = 13/17 (76%)
Query: 92 FFESVLHAFLKHVDFNV 108
F+++ L L+H++FN+
Sbjct: 195 FYQTTLDTLLRHMEFNL 211
Score = 37 (18.1 bits), Expect = 0.00035, Sum P(3) = 0.00035
Identities = 7/29 (24%), Positives = 19/29 (65%)
Query: 139 SVMNMIKDTKAAQEVQHVEVAHQRMAVQT 167
+V ++ DTK A+E + ++ ++++ +T
Sbjct: 280 TVKALLSDTKHARETKLMDDFYEQLRKET 308
>GENEDB_PFALCIPARUM|MAL7P1.118 [details] [associations]
symbol:MAL7P1.118 "PelOta protein homologue,
putative" species:5833 "Plasmodium falciparum" [GO:0000280 "nuclear
division" evidence=ISS] InterPro:IPR004405 Pfam:PF03465
Pfam:PF03463 Pfam:PF03464 EMBL:AL844506 HOGENOM:HOG000184162
KO:K06965 OMA:MKLVRKD InterPro:IPR005140 InterPro:IPR005141
InterPro:IPR005142 PANTHER:PTHR10853 TIGRFAMs:TIGR00111
RefSeq:XP_001349122.1 ProteinModelPortal:Q8I6Z3 IntAct:Q8I6Z3
MINT:MINT-1685753 EnsemblProtists:MAL7P1.118:mRNA GeneID:2655184
KEGG:pfa:MAL7P1.118 EuPathDB:PlasmoDB:PF3D7_0722100
ProtClustDB:CLSZ2733745 Uniprot:Q8I6Z3
Length = 403
Score = 146 (56.5 bits), Expect = 7.3e-12, Sum P(2) = 7.3e-12
Identities = 32/72 (44%), Positives = 47/72 (65%)
Query: 156 VEVAHQRMAVQTLHITDDLFRNTAIATRKKYVDLVNSVKDSGGTAHVFSS--MSQGNLGQ 213
V+ A + A+ +L ITD FR+ + TRK+YV +V VK++GG ++FS S L
Sbjct: 299 VKYASKINAIDSLLITDKTFRSCDVKTRKEYVQVVQYVKNTGGQVYIFSDNHTSGEQLNS 358
Query: 214 LTGVAAILRFPL 225
LTG+AAIL+FP+
Sbjct: 359 LTGIAAILKFPI 370
Score = 74 (31.1 bits), Expect = 7.3e-12, Sum P(2) = 7.3e-12
Identities = 24/92 (26%), Positives = 37/92 (40%)
Query: 11 NGPRSVKMIPVDSDDLWFAYNLVAGKDPFLAITLRKVVRQTKSGGKDAEWVKLKSEIWWP 70
N + +I + DDLW YNL++ D + T RKV + + E KL +
Sbjct: 10 NDKMIIGLITEEDDDLWGVYNLLSLNDEIESYTSRKVQKDIGNNSYVTEIRKLMLTLCIT 69
Query: 71 SLSGKLYDKEGSI--KNILENEYFFESVLHAF 100
+ + + KN+ NEY H F
Sbjct: 70 KIDFDCENNSLRVSGKNVKANEYVKIGQYHTF 101
Score = 60 (26.2 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 15/45 (33%), Positives = 22/45 (48%)
Query: 78 DKEGSIKNILENEYFFESVLHAFLKHVDFNVVRCAEIS-PGFTEN 121
+ S K LEN FF VL ++F ++C + PGF +N
Sbjct: 173 NNSSSYKKSLEN--FFNIVLKNLYSSINFEKIKCIVLGGPGFFKN 215
>SGD|S000004946 [details] [associations]
symbol:DOM34 "Protein that facilitates ribosomal subunit
dissociation" species:4932 "Saccharomyces cerevisiae" [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0000294 "nuclear-transcribed mRNA
catabolic process, endonucleolytic cleavage-dependent decay"
evidence=IDA] [GO:0070651 "nonfunctional rRNA decay" evidence=IMP]
[GO:0043022 "ribosome binding" evidence=IDA] [GO:0090305 "nucleic
acid phosphodiester bond hydrolysis" evidence=IEA] [GO:0032790
"ribosome disassembly" evidence=IDA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
[GO:0004518 "nuclease activity" evidence=IEA] [GO:0004519
"endonuclease activity" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0006417 "regulation of translation" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007126 "meiosis" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0070966 "nuclear-transcribed
mRNA catabolic process, no-go decay" evidence=IGI;IMP] [GO:0004521
"endoribonuclease activity" evidence=IDA] InterPro:IPR004405
SGD:S000004946 Pfam:PF03465 Pfam:PF03463 Pfam:PF03464 GO:GO:0007126
GO:GO:0005737 GO:GO:0006417 GO:GO:0051301 GO:GO:0007067
GO:GO:0046872 GO:GO:0006412 EMBL:BK006947 GO:GO:0004521
GO:GO:0070651 eggNOG:COG1537 HOGENOM:HOG000184162 KO:K06965
OrthoDB:EOG469V3K GO:GO:0000294 InterPro:IPR005140
InterPro:IPR005141 InterPro:IPR005142 PANTHER:PTHR10853
TIGRFAMs:TIGR00111 EMBL:L11277 EMBL:X77114 EMBL:Z71277 PIR:S45456
RefSeq:NP_014397.1 PDB:2VGM PDB:2VGN PDB:3IZQ PDB:3J16 PDBsum:2VGM
PDBsum:2VGN PDBsum:3IZQ PDBsum:3J16 ProteinModelPortal:P33309
SMR:P33309 DIP:DIP-7520N IntAct:P33309 STRING:P33309 PaxDb:P33309
PeptideAtlas:P33309 EnsemblFungi:YNL001W GeneID:855731
KEGG:sce:YNL001W CYGD:YNL001w GeneTree:ENSGT00390000016326
OMA:ACILKYP EvolutionaryTrace:P33309 NextBio:980114
Genevestigator:P33309 GermOnline:YNL001W GO:GO:0070966
GO:GO:0032790 Uniprot:P33309
Length = 386
Score = 146 (56.5 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 36/89 (40%), Positives = 57/89 (64%)
Query: 146 DTKAAQEVQHVEVAHQRMAVQTLHITDDLFRNTAIATRKKYVDLVNSVKDSGGTAHVFSS 205
D KA + V A + A+ L +TD + + IA R++Y+ L++SV+ +GG A V S+
Sbjct: 295 DDKAWYGEKEVVKAAEYGAISYLLLTDKVLHSDNIAQREEYLKLMDSVESNGGKALVLST 354
Query: 206 M-SQGN-LGQLTGVAAILRFPLPNLTKND 232
+ S G L QLTG+A IL++PLP+L ++D
Sbjct: 355 LHSLGEELDQLTGIACILKYPLPDLDEDD 383
Score = 69 (29.3 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 21/71 (29%), Positives = 36/71 (50%)
Query: 1 MRIV--RKDLIPNGPRSVKMIPVDSDDLWFAYNLVAGKDPFLAITLRKVVRQTKSGGK-- 56
M+++ +KD G + ++P D +DL+ Y +V KD L I +K + GK
Sbjct: 1 MKVISLKKDSFNKGGAVITLLPEDKEDLFTVYQIV-DKDDEL-IFKKKFTSKLDEAGKKK 58
Query: 57 DAEWVKLKSEI 67
+ VKLK ++
Sbjct: 59 STDLVKLKIKV 69
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.133 0.399 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 260 248 0.00079 114 3 11 22 0.43 33
32 0.46 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 18
No. of states in DFA: 613 (65 KB)
Total size of DFA: 197 KB (2111 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 19.34u 0.13s 19.47t Elapsed: 00:00:01
Total cpu time: 19.34u 0.13s 19.47t Elapsed: 00:00:01
Start: Sat May 11 10:40:41 2013 End: Sat May 11 10:40:42 2013