BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048633
(130 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 33.9 bits (76), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 19/32 (59%)
Query: 42 VKDLFDARNNTTSITTKWAMAELLHNPEALSK 73
+ D+F A TT+ KW +A LLHNP+ K
Sbjct: 278 IGDIFGAGVETTTSVVKWTLAFLLHNPQVKKK 309
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Query: 74 ATSRDESTRDHAHSFMPKRFLG-SEVDFIGRNFESIPFGAGRRIC 117
A +E FMP+RFL + I + +PFGAG R C
Sbjct: 380 ALHHNEKEWHQPDQFMPERFLNPAGTQLISPSVSYLPFGAGPRSC 424
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 32.3 bits (72), Expect = 0.065, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 5/40 (12%)
Query: 78 DESTRDHAHSFMPKRFLGSEVDFIGRNFESIPFGAGRRIC 117
DE+ + H F P RFL G N ++ FG G R+C
Sbjct: 393 DETVWEQPHEFRPDRFLEP-----GANPSALAFGCGARVC 427
Score = 32.3 bits (72), Expect = 0.069, Method: Composition-based stats.
Identities = 15/28 (53%), Positives = 18/28 (64%)
Query: 42 VKDLFDARNNTTSITTKWAMAELLHNPE 69
V DLF TT+ T WA+A LLH+PE
Sbjct: 284 VVDLFIGGTETTASTLSWAVAFLLHHPE 311
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 32.0 bits (71), Expect = 0.096, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 77 RDESTRDHAHSFMPKRFLGSEVDFIGRNFESIPFGAGRRICPDLPL 122
+DE+ + F P+ FL ++ F+ + +PF AGRR C PL
Sbjct: 382 KDEAVWEKPFRFHPEHFLDAQGHFV-KPEAFLPFSAGRRACLGEPL 426
Score = 25.4 bits (54), Expect = 7.9, Method: Composition-based stats.
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 41 IVKDLFDARNNTTSITTKWAMAELLHNPE 69
+V DLF A TTS T W + ++ +P+
Sbjct: 276 VVADLFSAGMVTTSTTLAWGLLLMILHPD 304
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 32.0 bits (71), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Query: 72 SKATSRDESTRDHAHSFMPKRFLGSEVDFIGRNFESIPFGAGRRIC 117
++ E + +H F P+R+L E F +PFG G+R+C
Sbjct: 387 TQVLGSSEDNFEDSHKFRPERWLQKEKKI--NPFAHLPFGIGKRMC 430
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 32.0 bits (71), Expect = 0.10, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 77 RDESTRDHAHSFMPKRFLGSEVDFIGRNFESIPFGAGRRICPDLPL 122
+DE+ + F P+ FL ++ F+ + +PF AGRR C PL
Sbjct: 382 KDEAVWEKPFRFHPEHFLDAQGHFV-KPEAFLPFSAGRRACLGEPL 426
Score = 25.4 bits (54), Expect = 8.1, Method: Composition-based stats.
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 41 IVKDLFDARNNTTSITTKWAMAELLHNPE 69
+V DLF A TTS T W + ++ +P+
Sbjct: 276 VVADLFSAGMVTTSTTLAWGLLLMILHPD 304
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 30.8 bits (68), Expect = 0.21, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
Query: 60 AMAELLHNPEALSKATSRDESTRDHAHSFMPKRFLGSEVDFIGRNFESIPFGAGRRICP 118
A A+++++P A+ RD + D F P R+L + + + PF AG+R CP
Sbjct: 358 AGADIIYSPYAIQ----RDPKSYDDNLEFDPDRWLPERAANVPK-YAMKPFSAGKRKCP 411
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 30.4 bits (67), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 29/72 (40%), Gaps = 15/72 (20%)
Query: 17 QDLRRKKIKDLLGYAEEHCRAES---------------NIVKDLFDARNNTTSITTKWAM 61
+ + I+D+ EHC+ + NIV DLF A +T + W++
Sbjct: 244 KTFEKGHIRDITDSLIEHCQEKQLDENANVQLSDEKIINIVLDLFGAGFDTVTTAISWSL 303
Query: 62 AELLHNPEALSK 73
L+ NP K
Sbjct: 304 MYLVMNPRVQRK 315
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 30.0 bits (66), Expect = 0.36, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Query: 88 FMPKRFLGSEVDFIGRNFESIPFGAGRRIC 117
+ P+R+L ++ GRNF +PFG G R C
Sbjct: 397 YNPQRWL--DIRGSGRNFHHVPFGFGMRQC 424
>pdb|1NNH|A Chain A, Hypothetical Protein From Pyrococcus Furiosus Pfu-1801964
Length = 294
Score = 30.0 bits (66), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 51/114 (44%), Gaps = 15/114 (13%)
Query: 6 HIFTCQKLDANQDLRRKKIKDLLGYAEEHCRAESNIVKDLF-DARNNTTSITTKWAMAEL 64
H + +LD ++ R K++D++ R +V LF A T K E+
Sbjct: 110 HAYEFTQLDF--EVERAKMEDIM-------RLIERLVYGLFRKAEEWTGREFPKTKRFEV 160
Query: 65 LHNPEALSKATSRDESTRDHAHSF----MPKRFLGSEVDFIGRNFESI-PFGAG 113
E L + S ++++++ F +P+ F EVD RN++ I P+G G
Sbjct: 161 FEYSEVLEEFGSDEKASQEMEEPFWIINIPREFYDREVDGFWRNYDLILPYGYG 214
>pdb|1WIY|A Chain A, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
pdb|1WIY|B Chain B, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
Length = 389
Score = 30.0 bits (66), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 3/34 (8%)
Query: 84 HAHSFMPKRFLGSEVDFIGRNFESIPFGAGRRIC 117
+F P+RFL GR F PFG G+R+C
Sbjct: 306 EGEAFQPERFLAERGTPSGRYF---PFGLGQRLC 336
>pdb|2RCH|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCH|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCL|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|2RCL|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|3CLI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3CLI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3DSI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
pdb|3DSI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
Length = 495
Score = 29.6 bits (65), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 10/65 (15%)
Query: 33 EHCRAESNIVKDLFDARNNTTSITTKWAMAELLHNPEALSKATSRDESTRDHAHSFMPKR 92
++ RA+ ++V + DA K E+L+ + L+ +RD D A F+P+R
Sbjct: 364 QYGRAKKDLVIESHDA-------AFKVKAGEMLYGYQPLA---TRDPKIFDRADEFVPER 413
Query: 93 FLGSE 97
F+G E
Sbjct: 414 FVGEE 418
>pdb|2RCM|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|2RCM|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|3DSJ|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSJ|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSK|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
pdb|3DSK|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
Length = 495
Score = 29.6 bits (65), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 10/65 (15%)
Query: 33 EHCRAESNIVKDLFDARNNTTSITTKWAMAELLHNPEALSKATSRDESTRDHAHSFMPKR 92
++ RA+ ++V + DA K E+L+ + L+ +RD D A F+P+R
Sbjct: 364 QYGRAKKDLVIESHDA-------AFKVKAGEMLYGYQPLA---TRDPKIFDRADEFVPER 413
Query: 93 FLGSE 97
F+G E
Sbjct: 414 FVGEE 418
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 29.3 bits (64), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 16/70 (22%), Positives = 29/70 (41%), Gaps = 13/70 (18%)
Query: 17 QDLRRKKIKDLLGYAEEHCRAES-------------NIVKDLFDARNNTTSITTKWAMAE 63
QD + ++D+ G +H + N+V D+F A +T + W++
Sbjct: 249 QDFDKNSVRDITGALFKHSKKGPRASGNLIPQEKIVNLVNDIFGAGFDTVTTAISWSLMY 308
Query: 64 LLHNPEALSK 73
L+ PE K
Sbjct: 309 LVTKPEIQRK 318
>pdb|3SN5|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3SN5|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3V8D|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
pdb|3V8D|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
Length = 491
Score = 28.9 bits (63), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 21 RKKIKDLLGYAEEHCRAESNIVKDLFDARNNTTSITTKWAMAELLHNPEALSKATSRDES 80
R + D L ++ +A++++V L+ ++ NT T W++ +++ NPEA+ AT +
Sbjct: 243 RMFLNDTLSTFDDLEKAKTHLVV-LWASQANTIP-ATFWSLFQMIRNPEAMKAATEEVKR 300
Query: 81 TRDHA 85
T ++A
Sbjct: 301 TLENA 305
>pdb|3DAX|A Chain A, Crystal Structure Of Human Cyp7a1
pdb|3DAX|B Chain B, Crystal Structure Of Human Cyp7a1
Length = 491
Score = 28.5 bits (62), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 21 RKKIKDLLGYAEEHCRAESNIVKDLFDARNNTTSITTKWAMAELLHNPEALSKATSRDES 80
R + D L ++ +A++++V L+ ++ NT T W++ +++ NPEA+ AT +
Sbjct: 243 RMFLNDTLSTFDDLEKAKTHLVV-LWASQANTIP-ATFWSLFQMIRNPEAMKAATEEVKR 300
Query: 81 TRDHA 85
T ++A
Sbjct: 301 TLENA 305
>pdb|1N97|A Chain A, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
pdb|1N97|B Chain B, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
Length = 389
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
Query: 85 AHSFMPKRFLGSEVDFIGRNFESIPFGAGRRIC 117
+F P+RFL GR F PFG G+R+C
Sbjct: 307 GEAFRPERFLEERGTPSGRYF---PFGLGQRLC 336
>pdb|3G1Q|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
Length = 450
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Query: 41 IVKDLFDARNNTTSITTKWAMAELLH 66
IV +F A +T+SITT W+M L+H
Sbjct: 259 IVAAMF-AGQHTSSITTTWSMLHLMH 283
>pdb|3GW9|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
Length = 450
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Query: 41 IVKDLFDARNNTTSITTKWAMAELLH 66
IV +F A +T+SITT W+M L+H
Sbjct: 258 IVAAMF-AGQHTSSITTTWSMLHLMH 282
>pdb|3P99|A Chain A, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|B Chain B, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|C Chain C, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|D Chain D, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
Length = 453
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Query: 41 IVKDLFDARNNTTSITTKWAMAELLH 66
IV +F A +T+SITT W+M L+H
Sbjct: 257 IVAAMF-AGQHTSSITTTWSMLHLMH 281
>pdb|3TIK|A Chain A, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|B Chain B, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|C Chain C, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|D Chain D, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
Length = 454
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Query: 41 IVKDLFDARNNTTSITTKWAMAELLH 66
IV +F A +T+SITT W+M L+H
Sbjct: 258 IVAAMF-AGQHTSSITTTWSMLHLMH 282
>pdb|2X2N|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|C Chain C, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|D Chain D, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
Length = 475
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Query: 41 IVKDLFDARNNTTSITTKWAMAELLH 66
IV +F A +T+SITT W+M L+H
Sbjct: 271 IVAAMF-AGQHTSSITTTWSMLHLMH 295
>pdb|2WV2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Brucei In Complex With Fluconazole
Length = 475
Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Query: 41 IVKDLFDARNNTTSITTKWAMAELLH 66
IV +F A +T+SITT W+M L+H
Sbjct: 271 IVAAMF-AGQHTSSITTTWSMLHLMH 295
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 27.7 bits (60), Expect = 1.6, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 86 HSFMPKRFLGSEVDFIGRNFESIPFGAGRRIC 117
H F+P R+ + + + IPFGAGR C
Sbjct: 363 HDFVPARYEQPRQEDLLNRWTWIPFGAGRHRC 394
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 27.7 bits (60), Expect = 1.6, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 86 HSFMPKRFLGSEVDFIGRNFESIPFGAGRRIC 117
H F+P R+ + + + IPFGAGR C
Sbjct: 363 HDFVPARYEQPRQEDLLNRWTWIPFGAGRHRC 394
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 27.7 bits (60), Expect = 1.6, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 86 HSFMPKRFLGSEVDFIGRNFESIPFGAGRRIC 117
H F+P R+ + + + IPFGAGR C
Sbjct: 363 HDFVPARYEQPRQEDLLNRWTWIPFGAGRHRC 394
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 27.7 bits (60), Expect = 1.6, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 86 HSFMPKRFLGSEVDFIGRNFESIPFGAGRRIC 117
H F+P R+ + + + IPFGAGR C
Sbjct: 363 HDFVPARYEQPRQEDLLNRWTWIPFGAGRHRC 394
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 27.7 bits (60), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 21/40 (52%)
Query: 40 NIVKDLFDARNNTTSITTKWAMAELLHNPEALSKATSRDE 79
N DLF A TTS T ++A+ LL +PE +K E
Sbjct: 272 NTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIE 311
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 27.7 bits (60), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 21/40 (52%)
Query: 40 NIVKDLFDARNNTTSITTKWAMAELLHNPEALSKATSRDE 79
N DLF A TTS T ++A+ LL +PE +K E
Sbjct: 270 NTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIE 309
>pdb|3K1O|A Chain A, Crystal Structure Of Sterol 14-alpha Demethylase (cyp51)
From Trypanosoma Cruzi In Complex With A Potential
Antichagasic Drug, Posaconazole
pdb|3KSW|A Chain A, Crystal Structure Of Sterol 14alpha-demethylase (cyp51)
From Trypanosoma Cruzi In Complex With An Inhibitor Vnf
((4-(4-
Chlorophenyl)-n-[2-(1h-imidazol-1-yl)-1-
phenylethyl]benzamide)
Length = 458
Score = 26.9 bits (58), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Query: 41 IVKDLFDARNNTTSITTKWAMAELLH 66
IV +F A +T++ITT W+M L+H
Sbjct: 256 IVAAMF-AGQHTSTITTSWSMLHLMH 280
>pdb|3KHM|A Chain A, Crystal Structure Of Sterol 14alpha-Demethylase (Cyp51)
From Trypanosoma Cruzi In Complex With Inhibitor
Fluconazole
Length = 464
Score = 26.9 bits (58), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Query: 41 IVKDLFDARNNTTSITTKWAMAELLH 66
IV +F A +T++ITT W+M L+H
Sbjct: 262 IVAAMF-AGQHTSTITTSWSMLHLMH 286
>pdb|2WUZ|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WUZ|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WX2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
pdb|2WX2|B Chain B, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
Length = 473
Score = 26.9 bits (58), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Query: 41 IVKDLFDARNNTTSITTKWAMAELLH 66
IV +F A +T++ITT W+M L+H
Sbjct: 271 IVAAMF-AGQHTSTITTSWSMLHLMH 295
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 26.6 bits (57), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 88 FMPKRFLGSEVDFIGRNFESIPFGAGRRIC 117
F P+ FL +F N+ +PF AG+RIC
Sbjct: 390 FDPRHFLDEGGNFKKSNY-FMPFSAGKRIC 418
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 26.6 bits (57), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 88 FMPKRFLGSEVDFIGRNFESIPFGAGRRIC 117
F P R+L + G F +PFGAGR C
Sbjct: 373 FNPDRYL-QDNPASGEKFAYVPFGAGRHRC 401
>pdb|2DF4|A Chain A, Structure Of Trna-Dependent Amidotransferase Gatcab
Complexed With Mn2+
pdb|2DQN|A Chain A, Structure Of Trna-Dependent Amidotransferase Gatcab
Complexed With Asn
pdb|2G5H|A Chain A, Structure Of Trna-Dependent Amidotransferase Gatcab
pdb|2G5I|A Chain A, Structure Of Trna-dependent Amidotransferase Gatcab
Complexed With Adp-alf4
pdb|3IP4|A Chain A, The High Resolution Structure Of Gatcab
pdb|2F2A|A Chain A, Structure Of Trna-Dependent Amidotransferase Gatcab
Complexed With Gln
Length = 485
Score = 26.6 bits (57), Expect = 4.4, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 19 LRRKKIKDLLGYAEEHCRAESNIVKDLFDARNNTTSITTKWAMAELLHNPEALSKATSRD 78
+R + +++LL ++ S++VKD++DA T T K +A L A+ KA D
Sbjct: 3 IRYESVENLLTLIKDKKIKPSDVVKDIYDAIEETDP-TIKSFLA--LDKENAIKKAQELD 59
Query: 79 E 79
E
Sbjct: 60 E 60
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 26.2 bits (56), Expect = 5.2, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 13/85 (15%)
Query: 44 DLFDARNNTTSITTKWAMAELLHNPEALSK---------ATSRDESTRDHAHSFMPKRFL 94
+LF A T S T ++ L+ +PE +K +R D A MP ++
Sbjct: 275 NLFFAGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAK--MP--YM 330
Query: 95 GSEVDFIGRNFESIPFGAGRRICPD 119
+ + I R + IP G RR+ D
Sbjct: 331 EAVIHEIQRFGDVIPMGLARRVKKD 355
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 26.2 bits (56), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 37/87 (42%), Gaps = 13/87 (14%)
Query: 42 VKDLFDARNNTTSITTKWAMAELLHNPEALSKATS---------RDESTRDHAHSFMPKR 92
V DLF A TTS T ++ + LL +PE +K R +D +H MP
Sbjct: 273 VADLFVAGTETTSTTLRYGLLLLLKHPEVTAKVQEEIDHVIGRHRSPCMQDRSH--MP-- 328
Query: 93 FLGSEVDFIGRNFESIPFGAGRRICPD 119
+ + V I R + +P G + D
Sbjct: 329 YTDAVVHEIQRYSDLVPTGVPHAVTTD 355
Score = 26.2 bits (56), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 70 ALSKATSRDESTRDHAHSFMPKRFLGSEVDFIGRNFESIPFGAGRRIC 117
AL + D+ + + F P FL +F ++ +PF AG+RIC
Sbjct: 371 ALLTSVLHDDKEFPNPNIFDPGHFLDKNGNFKKSDY-FMPFSAGKRIC 417
>pdb|3PT8|B Chain B, Structure Of Hbii-Iii-Cn From Lucina Pectinata At Ph 5.0
Length = 152
Score = 26.2 bits (56), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 4/33 (12%)
Query: 12 KLDANQDLRRKKIKD----LLGYAEEHCRAESN 40
KL N+ +R K+++D LL Y E+HC E +
Sbjct: 96 KLHFNRGIRIKELRDGYGTLLRYLEDHCHVEGS 128
>pdb|3PT7|B Chain B, Structure Of Hbii-Iii-Oxy From Lucina Pectinata At Ph 5.0
Length = 152
Score = 26.2 bits (56), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 4/33 (12%)
Query: 12 KLDANQDLRRKKIKD----LLGYAEEHCRAESN 40
KL N+ +R K+++D LL Y E+HC E +
Sbjct: 96 KLHFNRGIRIKELRDGYGVLLRYLEDHCHVEGS 128
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 25.8 bits (55), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 42 VKDLFDARNNTTSITTKWAMAELLHNPEALSKATSRDE 79
V DLF A TTS T ++++ LL +PE ++ E
Sbjct: 270 VSDLFGAGTETTSTTLRYSLLLLLKHPEVAARVQEEIE 307
>pdb|4H3U|A Chain A, Crystal Structure Of Hypothetical Protein With
Ketosteroid Isomerase- Like Protein Fold From
Catenulispora Acidiphila Dsm 44928
pdb|4H3U|B Chain B, Crystal Structure Of Hypothetical Protein With
Ketosteroid Isomerase- Like Protein Fold From
Catenulispora Acidiphila Dsm 44928
pdb|4HVN|A Chain A, Crystal Structure Of Hypothetical Protein With
Ketosteroid Isomerase- Like Protein Fold From
Catenulispora Acidiphila Dsm 44928 In Complex With
Trimethylamine.
pdb|4HVN|B Chain B, Crystal Structure Of Hypothetical Protein With
Ketosteroid Isomerase- Like Protein Fold From
Catenulispora Acidiphila Dsm 44928 In Complex With
Trimethylamine
Length = 158
Score = 25.8 bits (55), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 16/35 (45%)
Query: 51 NTTSITTKWAMAELLHNPEALSKATSRDESTRDHA 85
T I T WA A NP AL + D + DHA
Sbjct: 26 TTPEIVTAWAAAWTGTNPNALGTLFAADGTYVDHA 60
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.136 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,809,603
Number of Sequences: 62578
Number of extensions: 134867
Number of successful extensions: 433
Number of sequences better than 100.0: 44
Number of HSP's better than 100.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 385
Number of HSP's gapped (non-prelim): 59
length of query: 130
length of database: 14,973,337
effective HSP length: 88
effective length of query: 42
effective length of database: 9,466,473
effective search space: 397591866
effective search space used: 397591866
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 45 (21.9 bits)