Query 048634
Match_columns 175
No_of_seqs 115 out of 1061
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 19:56:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048634.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/048634hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tx2_A Probable 6-phosphogluco 100.0 1.2E-51 4.2E-56 334.0 16.4 167 1-175 79-250 (251)
2 3oc6_A 6-phosphogluconolactona 100.0 1.7E-51 5.8E-56 332.6 15.6 165 1-175 79-248 (248)
3 3ico_A 6PGL, 6-phosphogluconol 100.0 4.2E-51 1.4E-55 333.6 16.8 167 1-175 95-266 (268)
4 3eb9_A 6-phosphogluconolactona 100.0 1.8E-48 6.3E-53 317.7 17.7 171 1-175 78-263 (266)
5 3hn6_A Glucosamine-6-phosphate 100.0 8.4E-48 2.9E-52 317.0 18.0 158 2-175 98-268 (289)
6 3css_A 6-phosphogluconolactona 100.0 2.5E-46 8.6E-51 305.2 14.6 171 1-175 78-265 (267)
7 1y89_A DEVB protein; structura 100.0 3.3E-46 1.1E-50 299.8 14.6 165 1-175 71-237 (238)
8 3lwd_A 6-phosphogluconolactona 100.0 2.3E-44 8E-49 287.2 13.4 150 1-166 71-225 (226)
9 1vl1_A 6PGL, 6-phosphogluconol 100.0 4.1E-44 1.4E-48 286.8 13.0 149 1-169 83-232 (232)
10 3nwp_A 6-phosphogluconolactona 100.0 4.3E-43 1.5E-47 281.1 11.0 149 1-166 75-232 (233)
11 3lhi_A Putative 6-phosphogluco 100.0 5.3E-43 1.8E-47 280.4 11.1 147 1-165 72-230 (232)
12 3e15_A Glucose-6-phosphate 1-d 100.0 6.1E-43 2.1E-47 290.0 11.2 160 1-171 101-295 (312)
13 1ne7_A Glucosamine-6-phosphate 100.0 1.9E-39 6.4E-44 267.2 17.3 158 2-175 77-247 (289)
14 2bkx_A Glucosamine-6-phosphate 100.0 1.7E-39 5.9E-44 260.4 16.1 159 2-175 72-241 (242)
15 1fs5_A Glucosamine-6-phosphate 100.0 5.9E-38 2E-42 255.0 17.2 158 2-175 77-247 (266)
16 2ri0_A Glucosamine-6-phosphate 100.0 5.1E-37 1.7E-41 245.0 16.8 155 2-175 68-234 (234)
17 2r5f_A Transcriptional regulat 99.7 3.1E-17 1.1E-21 133.0 6.9 142 2-175 96-262 (264)
18 2okg_A Central glycolytic gene 99.7 1.6E-17 5.6E-22 134.0 1.7 141 2-175 93-251 (255)
19 2gnp_A Transcriptional regulat 99.6 6.3E-16 2.2E-20 125.4 5.0 145 2-174 93-258 (266)
20 2w48_A Sorbitol operon regulat 99.6 1.6E-15 5.6E-20 125.5 6.4 142 4-175 149-313 (315)
21 2o0m_A Transcriptional regulat 99.5 5.5E-16 1.9E-20 129.9 0.4 142 2-174 180-338 (345)
22 3nze_A Putative transcriptiona 99.0 5.9E-10 2E-14 90.3 7.0 140 3-174 93-260 (267)
23 3efb_A Probable SOR-operon reg 98.6 4.9E-08 1.7E-12 78.9 4.6 141 5-174 101-263 (266)
24 3kv1_A Transcriptional repress 98.4 8.8E-08 3E-12 77.4 2.1 144 3-174 92-258 (267)
25 2ab1_A Hypothetical protein; H 42.8 18 0.0006 25.1 2.8 16 67-82 60-75 (122)
26 2a7y_A Hypothetical protein RV 41.1 12 0.00039 24.5 1.5 25 64-91 35-59 (83)
27 1ihn_A Hypothetical protein MT 38.0 21 0.0007 24.5 2.5 18 68-85 61-78 (113)
28 2fvt_A Conserved hypothetical 36.5 18 0.00061 25.6 2.0 15 67-81 66-80 (135)
29 3cpk_A Uncharacterized protein 21.5 44 0.0015 24.1 1.9 14 68-81 88-101 (150)
No 1
>3tx2_A Probable 6-phosphogluconolactonase; ssgcid, hydrolase; 1.50A {Mycobacterium abscessus}
Probab=100.00 E-value=1.2e-51 Score=333.96 Aligned_cols=167 Identities=38% Similarity=0.612 Sum_probs=151.9
Q ss_pred CCCCCChhhHHHHHHHHhcCCCCCCCCCeEeCCCC-----CCHHHHHHHHHHHHHHhhccchhhccccCCCCcccEEEEc
Q 048634 1 VVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDA-----LSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLG 75 (175)
Q Consensus 1 ~Vp~~~~~Sn~~~~~~~ll~~~~i~~~~~~~~~~~-----~~~~~~~~~y~~~l~~~~~~~~~~~~~~~~~~~~Dl~lLG 75 (175)
|||++|++||+++++++||++++|+++|+|++++. .+++++|++|++.|++++..+ .+.|+||++|||
T Consensus 79 ~vp~~~~~Sn~~~~~~~ll~~v~i~~~~i~~~~~~~~~~~~~~~~~a~~Ye~~i~~~~~~~-------~~~~~~Dl~lLG 151 (251)
T 3tx2_A 79 YVPKTDPERNAWQAWEALLEHVNFPLRNMHAMPNSESEYGTDLDAAALAYEQLLAANAEPG-------QDCPAFDVHLLG 151 (251)
T ss_dssp SSCTTCTTCHHHHHHHHTGGGSCCCGGGBCCCCCTTSSCTTCHHHHHHHHHHHHHHTSCTT-------CSSCCCSEEEEC
T ss_pred cCCCCChHHHHHHHHHHhhccCCCCHHHEEECCCcccccCCCHHHHHHHHHHHHHhhhccc-------cCCCCCCEEEEC
Confidence 69999999999999999999999999999999875 489999999999999865421 135789999999
Q ss_pred ccccCcccccCCCCCCCccCCceEEeccCCCCCCCceEEeChHHHhccCceEEEEcCCCHHHHHHHHHcCCCCCcccccc
Q 048634 76 MGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQ 155 (175)
Q Consensus 76 mG~DGH~AslfP~~~~l~~~~~~v~~~~~~~~~p~~riTlt~~~i~~ar~v~~lv~G~~K~~~l~~~l~~~~~~~~~Pas 155 (175)
||+||||||||||++.+.++.++++.+.++|++|++|||||++.|++||+|+|+++|++|+++++++++++.+.. +|+|
T Consensus 152 ~G~DGH~as~fPg~~~~~~~~~~vv~~~~~~~~P~~riTlt~~~I~~Ar~i~ll~~G~~Ka~av~~~l~g~~~~~-~Pas 230 (251)
T 3tx2_A 152 MGGEGHINSLFPHTDAVKETQRLVVAVPDSPKPPPQRITLTLPAIQRSREVWLVVSGEAKADAVAAAVGGADPVD-VPAA 230 (251)
T ss_dssp CCTTCCBTTBCTTCHHHHCSSCSEEEESCCSSSSSCEEEECHHHHTTSSEEEEEECSGGGHHHHHHHHTTCCTTT-SGGG
T ss_pred CCCCCceEEcCCcChhhccCcceEEEecCCCCCCCcEEEECHHHHHhcCeEEEEEeCHHHHHHHHHHHhCCCCCC-CChH
Confidence 999999999999998877776677667788999999999999999999999999999999999999999988765 9999
Q ss_pred ccccCCeEEEEechhhhcCC
Q 048634 156 MALAEEEFTWFLDKDATSKL 175 (175)
Q Consensus 156 ~l~~~~~~~~~~D~~Aa~~l 175 (175)
.|+.|++++||+|++||++|
T Consensus 231 ~l~~h~~~~~~~D~~Aa~~L 250 (251)
T 3tx2_A 231 GAKGIERTVWLLDEAAASQL 250 (251)
T ss_dssp GCCCSSEEEEEEETTTTTTC
T ss_pred HhccCCCEEEEEeHHHHhhc
Confidence 99999999999999999986
No 2
>3oc6_A 6-phosphogluconolactonase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, carboxylic ester hydrolase; 2.10A {Mycobacterium smegmatis}
Probab=100.00 E-value=1.7e-51 Score=332.59 Aligned_cols=165 Identities=39% Similarity=0.644 Sum_probs=151.2
Q ss_pred CCCCCChhhHHHHHHHHhcCCCCCCCCCeEeCCCC-----CCHHHHHHHHHHHHHHhhccchhhccccCCCCcccEEEEc
Q 048634 1 VVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDA-----LSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLG 75 (175)
Q Consensus 1 ~Vp~~~~~Sn~~~~~~~ll~~~~i~~~~~~~~~~~-----~~~~~~~~~y~~~l~~~~~~~~~~~~~~~~~~~~Dl~lLG 75 (175)
|||++|++||+++++++||++++|+++|+|++++. .+++++|++|++.|++.++ ++.|+||++|||
T Consensus 79 ~vp~~~~~Sn~~~~~~~ll~~v~i~~~~i~~~~~~~~~~~~~~~~~a~~Ye~~i~~~~~---------~~~~~~Dl~lLG 149 (248)
T 3oc6_A 79 FVPQDDDERNDKQAREALLDHIGIPPVNVHAMAASDGEFGDDLEAAAAGYAQLLSANFD---------SSVPGFDVHLLG 149 (248)
T ss_dssp CSCTTCTTCHHHHHHHHTGGGSCCCGGGBCCCCCTTSTTTTCHHHHHHHHHHHHHHHHT---------SSSCSEEEEEEC
T ss_pred cCCCCChHHHHHHHHHHhhccCCCChhhEEecCCcccccCCCHHHHHHHHHHHHHHhcc---------cCCCCCCEEEEC
Confidence 69999999999999999999999999999999875 4899999999999998653 134789999999
Q ss_pred ccccCcccccCCCCCCCccCCceEEeccCCCCCCCceEEeChHHHhccCceEEEEcCCCHHHHHHHHHcCCCCCcccccc
Q 048634 76 MGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQ 155 (175)
Q Consensus 76 mG~DGH~AslfP~~~~l~~~~~~v~~~~~~~~~p~~riTlt~~~i~~ar~v~~lv~G~~K~~~l~~~l~~~~~~~~~Pas 155 (175)
||+||||||||||++.+.++.++++.+.++|++|++|||||++.|++||+|+|+++|++|+++++++++++.+.. +|+|
T Consensus 150 ~G~dGH~aslfPg~~~~~~~~~~vv~~~~~~~~P~~riTlt~~~I~~Ar~i~ll~~G~~Ka~av~~~l~g~~~~~-~Pas 228 (248)
T 3oc6_A 150 MGGEGHVNSLFPDTDAVRETERLVVGVSDSPKPPPRRITLTLPAVQNSREVWLVVSGEAKADAVAAAVGGADPVD-IPAA 228 (248)
T ss_dssp CCTTCCBTTBCTTCHHHHCSSCSEEEESCCSSSSSCEEEECHHHHTTEEEEEEEECSGGGHHHHHHHHHTCCTTT-SGGG
T ss_pred CCCCCCEEEcCCCChhhccCcceEEEecCCCCCCCcEEEcCHHHHHhhCeEEEEEeCHHHHHHHHHHHcCCCCCC-CChH
Confidence 999999999999998887776677667788999999999999999999999999999999999999999988765 9999
Q ss_pred ccccCCeEEEEechhhhcCC
Q 048634 156 MALAEEEFTWFLDKDATSKL 175 (175)
Q Consensus 156 ~l~~~~~~~~~~D~~Aa~~l 175 (175)
.|+.|++++||+|++||++|
T Consensus 229 ~l~~h~~~~~~~D~~Aa~~L 248 (248)
T 3oc6_A 229 GAVGRERTVWLVDEAAAAKL 248 (248)
T ss_dssp GCCCSSEEEEEEETTTTTTC
T ss_pred HhccCCCEEEEEchHHhhCC
Confidence 99999999999999999986
No 3
>3ico_A 6PGL, 6-phosphogluconolactonase; ssgcid, infectious disease, niaid, hydrolase, structural genomics; 2.15A {Mycobacterium tuberculosis}
Probab=100.00 E-value=4.2e-51 Score=333.58 Aligned_cols=167 Identities=40% Similarity=0.671 Sum_probs=152.0
Q ss_pred CCCCCChhhHHHHHHHHhcCCCCCCCCCeEeCCCC-----CCHHHHHHHHHHHHHHhhccchhhccccCCCCcccEEEEc
Q 048634 1 VVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDA-----LSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLG 75 (175)
Q Consensus 1 ~Vp~~~~~Sn~~~~~~~ll~~~~i~~~~~~~~~~~-----~~~~~~~~~y~~~l~~~~~~~~~~~~~~~~~~~~Dl~lLG 75 (175)
|||++|++||++++|++||++++|+++|+|+++++ .+++++|++|++.|++.+..+ ++.|+||++|||
T Consensus 95 ~vp~~~~~Sn~~~~~~~Ll~~v~i~~~~i~~~~~~~~~~~~~~~~~a~~Ye~~i~~~~~~~-------~~~p~~Dl~lLG 167 (268)
T 3ico_A 95 YVPEDDDERNLKQARRALLNHVDIPSNQVHPMAASDGDFGGDLDAAALAYEQVLAASAAPG-------DPAPNFDVHLLG 167 (268)
T ss_dssp CSCTTCTTCHHHHHHHHTGGGSCCCGGGBCCCCCTTSTTTTCHHHHHHHHHHHHHHHSSTT-------CSSCCCSEEEEC
T ss_pred cCCCCcchhHHHHHHHHHHhccCCcccccccccccCCCcccchhHHHHHHHHHHhhccCCC-------CCCCCcceEEec
Confidence 69999999999999999999999999999999875 589999999999999874321 235689999999
Q ss_pred ccccCcccccCCCCCCCccCCceEEeccCCCCCCCceEEeChHHHhccCceEEEEcCCCHHHHHHHHHcCCCCCcccccc
Q 048634 76 MGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQ 155 (175)
Q Consensus 76 mG~DGH~AslfP~~~~l~~~~~~v~~~~~~~~~p~~riTlt~~~i~~ar~v~~lv~G~~K~~~l~~~l~~~~~~~~~Pas 155 (175)
||+||||||||||++.+.++.++++.+.++|++|++|||||++.|++||+|+|+++|++|+++|+++++++.+.. +|+|
T Consensus 168 mG~DGH~as~fPg~~~~~~t~~~vv~~~~~~~~P~~rITlt~~~I~~Ar~i~ll~~G~~Ka~av~~~l~g~~~~~-~Pas 246 (268)
T 3ico_A 168 MGPEGHINSLFPHSPAVLESTRMVVAVDDSPKPPPRRITLTLPAIQRSREVWLLVSGPGKADAVAAAIGGADPVS-VPAA 246 (268)
T ss_dssp CCTTCCBTTBCTTCHHHHCSSCSEEEESCCSSSSSCEEEECHHHHTTSSEEEEEECSGGGHHHHHHHHTTCCTTT-SGGG
T ss_pred cCCcccccccCCCChhhhhhceEEEEecCCCCCCCceEEEechhhhccceEEEEecCCCchHHHHHHhcCCCCcc-cccc
Confidence 999999999999998887776777667788899999999999999999999999999999999999999987765 9999
Q ss_pred ccccCCeEEEEechhhhcCC
Q 048634 156 MALAEEEFTWFLDKDATSKL 175 (175)
Q Consensus 156 ~l~~~~~~~~~~D~~Aa~~l 175 (175)
.|+.|++++||+|++||++|
T Consensus 247 ~l~~h~~~~~~lD~~Aa~~L 266 (268)
T 3ico_A 247 GAVGRQNTLWLLDRDAAAKL 266 (268)
T ss_dssp GCCCSSEEEEEEEHHHHTTC
T ss_pred ccccccceEEEecchhhhhC
Confidence 99999999999999999986
No 4
>3eb9_A 6-phosphogluconolactonase; catalytic mechanism, pentose phosphate pathway, hydrolase, zinc binding site; HET: FLC; 2.00A {Trypanosoma brucei} PDB: 2j0e_A* 3e7f_A*
Probab=100.00 E-value=1.8e-48 Score=317.73 Aligned_cols=171 Identities=30% Similarity=0.451 Sum_probs=145.3
Q ss_pred CCCCCChhhHHHHHHHHhcCCCCCCCCCeEeCCCC-CCH---------HHHHHHHHHHHHHhhccchhhccccCCCCccc
Q 048634 1 VVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDA-LSA---------EGAAEDYETCLKHLTKSNILATSAATGFPKFD 70 (175)
Q Consensus 1 ~Vp~~~~~Sn~~~~~~~ll~~~~i~~~~~~~~~~~-~~~---------~~~~~~y~~~l~~~~~~~~~~~~~~~~~~~~D 70 (175)
|||++|++||+++++++||+ +||++|+|++++. .++ +++|++|++.|++..+.+.+.. .....|+||
T Consensus 78 ~vp~~~~~Sn~~~~~~~ll~--~i~~~~i~~~~~~~~~~~~~~~~~~~~~~a~~Ye~~i~~~~~~~~~~g-~~~~~p~~D 154 (266)
T 3eb9_A 78 MVPADSTDSNYNMAREVLLH--DIPDDLVFPFDTSAVTPSAEATSADAMRVAEAYGKQLASLLPLKSVGE-AGPKVPVFD 154 (266)
T ss_dssp SSCTTSTTCHHHHHHHHTGG--GSCGGGEECCCCTTCCTTSCCCHHHHHHHHHHHHHHHHHHSCEEETTT-TSCEEECCS
T ss_pred ccCCCChHHHHHHHHHHhhc--CCCHHHEEeCCCccCChhhccccCcHHHHHHHHHHHHHHhcccccccc-ccccCCCCC
Confidence 69999999999999999999 8999999999987 577 9999999999998642100000 000124799
Q ss_pred EEEEcccccCcccccCCCCCCCccC--CceEEeccCCC--CCCCceEEeChHHHhccCceEEEEcCCCHHHHHHHHHcCC
Q 048634 71 LMLLGMGPDGHIASLFPGHPLLKEN--EKWVTFIKDSP--KPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNN 146 (175)
Q Consensus 71 l~lLGmG~DGH~AslfP~~~~l~~~--~~~v~~~~~~~--~~p~~riTlt~~~i~~ar~v~~lv~G~~K~~~l~~~l~~~ 146 (175)
++|||||+||||||||||++.+.+. .++|....++| ++|++|||||++.|++||+|+|+++|++|+++++++++++
T Consensus 155 l~lLGmG~DGH~as~fPg~~~l~~~~~~~~v~~~~~~~~~~~P~~rITlt~~~I~~A~~i~ll~~G~~Ka~av~~~l~g~ 234 (266)
T 3eb9_A 155 VVLLGLGSDGHTASIFPGSQAEKETDGKVVVSVGFPSETMKPKVWRVTLSPATIMQARNVIVLATGAEKKWVVDGILADT 234 (266)
T ss_dssp EEEECCCTTSCBTTBCTTCSGGGCCSSSCSEEEECCCTTCSSCSCEEEECHHHHHTCSEEEEEECCGGGHHHHHHHHCSS
T ss_pred EEEEccCCCCCeeecCCCCcccccCCCccEEEecCCCcccCCCCeEEEcCHHHHHhcCeEEEEEeCHHHHHHHHHHHhCC
Confidence 9999999999999999999987765 67776533277 8999999999999999999999999999999999999998
Q ss_pred CCCcccccccccc-CCeEEEEechhhhcCC
Q 048634 147 QNSDLLPVQMALA-EEEFTWFLDKDATSKL 175 (175)
Q Consensus 147 ~~~~~~Pas~l~~-~~~~~~~~D~~Aa~~l 175 (175)
.++. +|+|+|+. |++++||+|++||++|
T Consensus 235 ~~~~-~pAs~l~~~h~~~~~~~D~~Aa~~L 263 (266)
T 3eb9_A 235 AHKA-PVARFLRGCEGNVSFLLDKEIAENL 263 (266)
T ss_dssp CSSC-CGGGGGGGCSSEEEEEEEHHHHC--
T ss_pred CCcc-chhHHhcCCCCCEEEEEcHHHhccc
Confidence 8775 99999998 9999999999999976
No 5
>3hn6_A Glucosamine-6-phosphate deaminase; niaid, ssgcid, decode, UW, SBRI, infectious disease, LYME DI non-hodgkin lymphomas, neuroborreliosis; 2.20A {Borrelia burgdorferi}
Probab=100.00 E-value=8.4e-48 Score=317.01 Aligned_cols=158 Identities=26% Similarity=0.393 Sum_probs=144.0
Q ss_pred CCCCChhhHHHHHHHHhcCCCCCCCCCeEeCCCC-CCHHHHHHHHHHHHHHhhccchhhccccCCCCcccEEEEcccccC
Q 048634 2 VPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDA-LSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDG 80 (175)
Q Consensus 2 Vp~~~~~Sn~~~~~~~ll~~~~i~~~~~~~~~~~-~~~~~~~~~y~~~l~~~~~~~~~~~~~~~~~~~~Dl~lLGmG~DG 80 (175)
||++|++||+++++++||++++|+++|+|++++. .+++++|++|++.|++. ++||++|||||+||
T Consensus 98 vp~~~~~Sn~~~~~~~Ll~~v~i~~~~i~~~~~~~~d~~~~a~~Ye~~i~~~--------------~~~Dl~lLGmG~DG 163 (289)
T 3hn6_A 98 IEENHPESYHSFMWNNFFSHIDIKKENINILNGNASNLKKECEEYEKKIKSF--------------GGIMLFVGGIGPDG 163 (289)
T ss_dssp CCTTSTTSHHHHHHHHTGGGSCCCGGGEECCCTTCSSHHHHHHHHHHHHHHT--------------TSCSEEEEECCTTS
T ss_pred CCCCcHHHHHHHHHHHhhccCCCCHHHeecCCCCCCCHHHHHHHHHHHHhhc--------------CCCCEEEEccCCCC
Confidence 8999999999999999999999999999999985 68999999999999874 58999999999999
Q ss_pred cccccCCCCCCCccCCceEEec------------cCCCCCCCceEEeChHHHhccCceEEEEcCCCHHHHHHHHHcCCCC
Q 048634 81 HIASLFPGHPLLKENEKWVTFI------------KDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQN 148 (175)
Q Consensus 81 H~AslfP~~~~l~~~~~~v~~~------------~~~~~~p~~riTlt~~~i~~ar~v~~lv~G~~K~~~l~~~l~~~~~ 148 (175)
||||||||++ +.+..++|... .+.+++|++|||||++.|++||+|+|+++|++|+++++++++++.+
T Consensus 164 H~asnfPg~~-l~~~t~~v~l~~~t~~~n~~~f~~~~~~~P~~rITl~l~~I~~Ar~i~lla~G~~Ka~av~~~l~g~~~ 242 (289)
T 3hn6_A 164 HIAFNEPGSS-LTSRTRIKTLTQDTIIANSRFFEGDVNKVPKNALTVGIGTIMDSQEVLIIVNGHNKARALKHAIEKGVN 242 (289)
T ss_dssp CBTTBCTTCC-TTCCSEEEECCHHHHHHHGGGTTTCTTTSCSEEEECCHHHHHTSSCEEEEECSGGGHHHHHHHHTSCCC
T ss_pred ceeecCCCCc-ccccceEEeccHHHHHHhhhhccCCCCCCCCeEEECCHHHHHccCeEEEEEcChHHHHHHHHHHhCCCC
Confidence 9999999986 45555555421 2578899999999999999999999999999999999999999887
Q ss_pred CccccccccccCCeEEEEechhhhcCC
Q 048634 149 SDLLPVQMALAEEEFTWFLDKDATSKL 175 (175)
Q Consensus 149 ~~~~Pas~l~~~~~~~~~~D~~Aa~~l 175 (175)
.. +|+|.|+.|++++||+|++||++|
T Consensus 243 ~~-~Pas~l~~h~~~~~~lD~~Aa~~L 268 (289)
T 3hn6_A 243 HM-WTISALQLHKNAIIVSDKNATYEL 268 (289)
T ss_dssp TT-SGGGGGGGCSSEEEEEESGGGTTS
T ss_pred cc-cChHHHccCCCEEEEEcHHHHccc
Confidence 75 999999999999999999999986
No 6
>3css_A 6-phosphogluconolactonase; structural genomics, medical structural genomics of pathogen protozoa consortium, SGPP, leish hydrolase; 1.70A {Leishmania braziliensis} PDB: 3ch7_A
Probab=100.00 E-value=2.5e-46 Score=305.20 Aligned_cols=171 Identities=27% Similarity=0.455 Sum_probs=146.5
Q ss_pred CCCCCChhhHHHHHHHHhcCCCCCCCCCeEeCCCCC------------CHH-HHHHHHHHHHHHhhccchhhccccCCCC
Q 048634 1 VVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDAL------------SAE-GAAEDYETCLKHLTKSNILATSAATGFP 67 (175)
Q Consensus 1 ~Vp~~~~~Sn~~~~~~~ll~~~~i~~~~~~~~~~~~------------~~~-~~~~~y~~~l~~~~~~~~~~~~~~~~~~ 67 (175)
|||++|++||+++++++||++++ ++|+|++++.. +++ ++|++|++.|++.++.++.. ...++.|
T Consensus 78 ~vp~~~~~Sn~~~~~~~ll~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~e~~~a~~Ye~~l~~~~~~~~~~-~~~~~~p 154 (267)
T 3css_A 78 LLSEDDEQSNFSMATKALLRDVP--SSDVISIDRRAALATSKDEKGGLDGAWAVAQDYEVKLLNCLPCKQIN-GTAKSVP 154 (267)
T ss_dssp SSCTTSTTSHHHHHHHHTGGGSC--GGGBCCCCCHHHHTTTTCTTTTHHHHHHHHHHHHHHHHHHSCEEECT-TSSCEEE
T ss_pred ccCCCCHHHHHHHHHHHHhccCC--HHHEEeCCCchhccccccccccCChhHHHHHHHHHHHHHhcCccccc-cccCCCC
Confidence 69999999999999999999988 67999998754 788 89999999999863200000 0001235
Q ss_pred cccEEEEcccccCcccccCCCCCCCccCCceEE-ec-cCCCCCCCceEEeChHHHhccCceEEEEcCCCHHHHHHHHHcC
Q 048634 68 KFDLMLLGMGPDGHIASLFPGHPLLKENEKWVT-FI-KDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGN 145 (175)
Q Consensus 68 ~~Dl~lLGmG~DGH~AslfP~~~~l~~~~~~v~-~~-~~~~~~p~~riTlt~~~i~~ar~v~~lv~G~~K~~~l~~~l~~ 145 (175)
+||++|||||+||||||||||++.+.+..++|. .+ .++|++|++|||||++.|++||+|+|+++|++|++++++++++
T Consensus 155 ~~Dl~lLGiG~dGH~aslfP~~~~L~~~~~~v~~~~~~~~~~~p~~rITltl~~I~~A~~v~~la~G~~Ka~av~~~l~g 234 (267)
T 3css_A 155 VVDIVLLGFGSDGHTASIFPDSVAATDEEHVVSVSFPSPTMSPKVWRVTLSKTVIQYAKHVVVLAAGKDKNWVVRGVLSE 234 (267)
T ss_dssp CCSEEEEECCTTSCBTTBCTTSGGGGCCSCSEEEECCCTTCSSCSCEEEECHHHHHHCSEEEEEECSGGGHHHHHHHHCS
T ss_pred CCCEEEECCCCCccceeCCCCCcccCCCCcEEEeecccCCCCCCCceEECCHHHHHcCCEEEEEEeCHHHHHHHHHHHcC
Confidence 799999999999999999999988877777776 55 5778999999999999999999999999999999999999999
Q ss_pred CCCCccccccccc-c-CCeEEEEechhhhcCC
Q 048634 146 NQNSDLLPVQMAL-A-EEEFTWFLDKDATSKL 175 (175)
Q Consensus 146 ~~~~~~~Pas~l~-~-~~~~~~~~D~~Aa~~l 175 (175)
+.+.. +|+|+|+ . |++++||+|++||++|
T Consensus 235 ~~~~~-~Pas~l~~~~h~~~~~~~D~~Aa~~l 265 (267)
T 3css_A 235 SPTDP-LPVSRFLRDCRGSVTLLLDPGAGEGV 265 (267)
T ss_dssp SCCSS-CCGGGGGGGCSSEEEEEECTTTTTTT
T ss_pred CCCCc-CCHHHhccCCCCCEEEEECHHHHhhc
Confidence 87665 9999999 7 8999999999999875
No 7
>1y89_A DEVB protein; structural genomics, protein structure initiative, PSI, MIDW center for structural genomics, MCSG; HET: 2PE; 2.00A {Vibrio cholerae o1 biovar eltor str}
Probab=100.00 E-value=3.3e-46 Score=299.75 Aligned_cols=165 Identities=28% Similarity=0.483 Sum_probs=146.1
Q ss_pred CCCCCChhhHHHHHHHHhcCCCCCCCCCeEeCCCCCCHHHHHHHHHHHHHHhhccchhhccccCCCCcccEEEEcccccC
Q 048634 1 VVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDG 80 (175)
Q Consensus 1 ~Vp~~~~~Sn~~~~~~~ll~~~~i~~~~~~~~~~~~~~~~~~~~y~~~l~~~~~~~~~~~~~~~~~~~~Dl~lLGmG~DG 80 (175)
|||++|++||+++++++||++++++++|+|.+++..++++++++|++.|++.++. .++.++||++|||||+||
T Consensus 71 ~vp~~~~~Sn~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~y~~~l~~~~~~-------~~~~~~~Dl~lLGiG~dG 143 (238)
T 1y89_A 71 CVAPDDAESNYGEANALLFSKINMPAQNIHRILGENEPQAEAERFAQAMAHVIPT-------ENGTPVFDWILLGVGADG 143 (238)
T ss_dssp SSCTTSTTCHHHHHHHHTGGGSCCCGGGBCCCCTTSCHHHHHHHHHHHHHHHSCE-------ETTEECCSEEEECCCTTS
T ss_pred CCCCCCHHHHHHHHHHHhhccCCCCHHHEEeCCCCCCHHHHHHHHHHHHHHhhcc-------cCCCCCCCEEEECCCCCC
Confidence 6899999999999999999999999999999998778999999999999986431 012347999999999999
Q ss_pred cccccCCCCCCCccCCceEEeccCCCCCCCceEEeChHHHhccCceEEEEcCCCHHHHHHHHHcCC-CCCcccccccccc
Q 048634 81 HIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNN-QNSDLLPVQMALA 159 (175)
Q Consensus 81 H~AslfP~~~~l~~~~~~v~~~~~~~~~p~~riTlt~~~i~~ar~v~~lv~G~~K~~~l~~~l~~~-~~~~~~Pas~l~~ 159 (175)
||||||||+ +.+..+++..+.+.+++|++|||||++.|++||+|+|+++|++|+++++++++++ .+. .+|+|.|+.
T Consensus 144 H~aslfP~~--l~~~~~~v~~~~~~~~~p~~rITltl~~i~~a~~vi~~a~G~~Ka~ai~~~l~~~~~~~-~~Pas~l~~ 220 (238)
T 1y89_A 144 HTASLFPGQ--TDYADANLSVVASHPESGQLRVSKTAKVLQAAKRISYLVLGAGKAEIVEQIHTTPAEQL-PYPAAKIHS 220 (238)
T ss_dssp CBTTBCTTT--CCTTCCSSEEEEECTTTCCEEEEECHHHHHHSSEEEEEECSGGGHHHHHHHHHSCGGGC-CCHHHHCCC
T ss_pred ceeecCCCC--CCCCCcEEEeccCCCCCCCCeEECCHHHHHhCCEEEEEEeCHHHHHHHHHHHhCCCCCc-cCCHHHHhc
Confidence 999999998 6666666665555677899999999999999999999999999999999999986 555 499999988
Q ss_pred -CCeEEEEechhhhcCC
Q 048634 160 -EEEFTWFLDKDATSKL 175 (175)
Q Consensus 160 -~~~~~~~~D~~Aa~~l 175 (175)
|++++||+|++||++|
T Consensus 221 ~~~~~~~~~D~~Aa~~l 237 (238)
T 1y89_A 221 TSGVTEWYLDSDAAAKI 237 (238)
T ss_dssp SSSEEEEEEEHHHHTTT
T ss_pred CCCCEEEEEChHHHhhc
Confidence 7999999999999876
No 8
>3lwd_A 6-phosphogluconolactonase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; 1.75A {Chromohalobacter salexigens}
Probab=100.00 E-value=2.3e-44 Score=287.24 Aligned_cols=150 Identities=25% Similarity=0.380 Sum_probs=131.3
Q ss_pred CCCCCChhhHHHHHHHHhcCCCCCCCCCeEeCCCC-CCHHHHHHHHHHHHHHhhccchhhccccCCCCcccEEEEccccc
Q 048634 1 VVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDA-LSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPD 79 (175)
Q Consensus 1 ~Vp~~~~~Sn~~~~~~~ll~~~~i~~~~~~~~~~~-~~~~~~~~~y~~~l~~~~~~~~~~~~~~~~~~~~Dl~lLGmG~D 79 (175)
|||++|++||+++++++||++ .++++|+|++++. .+++++|++|++.|++. .++||++|||||+|
T Consensus 71 ~vp~~~~~Sn~~~~~~~ll~~-~~~~~~~~~~~~~~~~~~~~~~~ye~~i~~~-------------~~~~Dl~lLG~G~d 136 (226)
T 3lwd_A 71 WVTADDADSNARLVRETLLVG-PAAEACFHPLTTDDDTPEAGVETVAERLESL-------------PWPASAVILGMGGD 136 (226)
T ss_dssp SSCTTSTTCHHHHHHHHTSSG-GGGGSEEECSCCSSSSHHHHHHHHHHHHHTS-------------CSSBSEEEECCCTT
T ss_pred ccCCCChHHHHHHHHHHhcCC-CCcHHhEecCCCCcCCHHHHHHHHHHHHHhc-------------CCCCCEEEECcCCC
Confidence 699999999999999999999 8889999998875 68999999999999864 13899999999999
Q ss_pred CcccccCCCCCCCcc---CCceEEeccCCCCCCCceEEeChHHHhccCceEEEEcCCCHHHHHHHHHcCCCCCccccccc
Q 048634 80 GHIASLFPGHPLLKE---NEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQM 156 (175)
Q Consensus 80 GH~AslfP~~~~l~~---~~~~v~~~~~~~~~p~~riTlt~~~i~~ar~v~~lv~G~~K~~~l~~~l~~~~~~~~~Pas~ 156 (175)
|||||||||++.+++ ...++.. .+.+++|++|||||++.|++||+|+|+++|++|+++|+++++++.+.. +|+|.
T Consensus 137 GH~as~fPg~~~L~~~~~~~~~~~~-~~~~~~P~~riTlt~~~I~~A~~i~ll~~G~~Ka~av~~~l~g~~~~~-~Pas~ 214 (226)
T 3lwd_A 137 GHTASLFPDSEQLATALETTSAAVV-VHAPSVPQARITLSASRLADAGLHVLHITGNDKRRVLAEALAGDDVRQ-LPIRA 214 (226)
T ss_dssp SCBTTBCTTCTTHHHHHHCCSSEEE-ECCTTSSSCEEEECHHHHTCBSCEEEEEESHHHHHHHHHHHHCCCTTT-STTHH
T ss_pred CCeeecCCCChhhhhhhccCCeEEe-cCCCCCCCcEEEcCHHHHHhhCeEEEEEECHHHHHHHHHHHcCCCCCc-CChHH
Confidence 999999999987753 3334432 367889999999999999999999999999999999999999987765 99999
Q ss_pred cccCC-eEEEE
Q 048634 157 ALAEE-EFTWF 166 (175)
Q Consensus 157 l~~~~-~~~~~ 166 (175)
|+.|+ +++|.
T Consensus 215 l~~h~~~v~w~ 225 (226)
T 3lwd_A 215 FLSQPIATYWA 225 (226)
T ss_dssp HHTSCCEEEEE
T ss_pred HhcCCCeEEeC
Confidence 98874 66663
No 9
>1vl1_A 6PGL, 6-phosphogluconolactonase; TM1154, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO hydrolase; HET: CIT; 1.55A {Thermotoga maritima} SCOP: c.124.1.1 PDB: 1pbt_A
Probab=100.00 E-value=4.1e-44 Score=286.83 Aligned_cols=149 Identities=33% Similarity=0.569 Sum_probs=135.6
Q ss_pred CCCCCChhhHHHHHHHHhcCCCCCCCCCeEeCCCCCCHHHHHHHHHHHHHHhhccchhhccccCCCCcccEEEEcccccC
Q 048634 1 VVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDG 80 (175)
Q Consensus 1 ~Vp~~~~~Sn~~~~~~~ll~~~~i~~~~~~~~~~~~~~~~~~~~y~~~l~~~~~~~~~~~~~~~~~~~~Dl~lLGmG~DG 80 (175)
|||++|++||+++++++||++++++++|+|++++..+++++|++|++.|++. .++||++|||||+||
T Consensus 83 ~vp~~~~~Sn~~~~~~~l~~~v~i~~~~i~~~~~~~~~e~~~~~y~~~i~~~-------------~~~~Dl~lLGiG~dG 149 (232)
T 1vl1_A 83 YVPLDSDQSNFRNINEVLFSRAKIPSGNVHYVDTSLPIEKACEKYEREIRSA-------------TDQFDLAILGMGPDG 149 (232)
T ss_dssp SSCTTSTTCHHHHHHHHTTTTSCCCGGGEECCCTTSCHHHHHHHHHHHHHHH-------------CSSCSEEEECCCTTS
T ss_pred ecCCCChHHHHHHHHHHHhccCCCCHHHEecCCCCCCHHHHHHHHHHHHHhc-------------CCCCCEEEEecCCCC
Confidence 6899999999999999999999999999999998889999999999999861 257999999999999
Q ss_pred cccccCC-CCCCCccCCceEEeccCCCCCCCceEEeChHHHhccCceEEEEcCCCHHHHHHHHHcCCCCCcccccccccc
Q 048634 81 HIASLFP-GHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQMALA 159 (175)
Q Consensus 81 H~AslfP-~~~~l~~~~~~v~~~~~~~~~p~~riTlt~~~i~~ar~v~~lv~G~~K~~~l~~~l~~~~~~~~~Pas~l~~ 159 (175)
||||||| |++.+.+..++|. +.+++|++|||||++.|++||+|+|+++|++|+++++++++++ . +|+|.|+.
T Consensus 150 H~aslfP~g~~~l~~~~~~v~---~~~~~p~~rITltl~~I~~A~~iilla~G~~Ka~av~~~l~g~---~-~Pas~l~~ 222 (232)
T 1vl1_A 150 HVASIFDLETGNKDNLVTFTD---PSGDPKVPRVTLTFRALNTSLYVLFLIRGKEKINRLTEILKDT---P-LPAYFVRG 222 (232)
T ss_dssp CBTTBCSHHHHTCSSSEEECS---SBTTTTBCEEEECHHHHTTCSEEEEEEESHHHHHHHHHHHTTC---C-CGGGGCCC
T ss_pred chhhccCCCCcccccCCcEEe---cCCCCCCCEEECCHHHHHhCCEEEEEEcCHHHHHHHHHHHhCC---C-CChHHhCc
Confidence 9999999 9876666555443 6678999999999999999999999999999999999999983 3 99999999
Q ss_pred CCeEEEEech
Q 048634 160 EEEFTWFLDK 169 (175)
Q Consensus 160 ~~~~~~~~D~ 169 (175)
|++++||+|+
T Consensus 223 h~~~~~~~D~ 232 (232)
T 1vl1_A 223 KEKTVWFVGK 232 (232)
T ss_dssp SSEEEEEEEC
T ss_pred CCCEEEEeCC
Confidence 9999999995
No 10
>3nwp_A 6-phosphogluconolactonase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, hydrolase; HET: MSE P6G PG4; 1.40A {Shewanella baltica}
Probab=100.00 E-value=4.3e-43 Score=281.08 Aligned_cols=149 Identities=28% Similarity=0.436 Sum_probs=126.6
Q ss_pred CCCCCChhhHHHHHHHHhcCCCCCCCCCeEeCCC-CCCHHHHHHHHHHHHHHhhccchhhccccCCCC-cccEEEEcccc
Q 048634 1 VVPKDHDDSNYKLAYDGFLSQVPITTGNVYAIND-ALSAEGAAEDYETCLKHLTKSNILATSAATGFP-KFDLMLLGMGP 78 (175)
Q Consensus 1 ~Vp~~~~~Sn~~~~~~~ll~~~~i~~~~~~~~~~-~~~~~~~~~~y~~~l~~~~~~~~~~~~~~~~~~-~~Dl~lLGmG~ 78 (175)
|||++|++||+++++++||+++++ +++++++++ ..+++++|++|++.|++. + +||++|||||+
T Consensus 75 ~vp~~~~~Sn~~~~~~~ll~~~~~-~~~~~~~~~~~~~~~~~~~~ye~~i~~~--------------~~~~Dl~lLG~G~ 139 (233)
T 3nwp_A 75 WVEADADASNERLVREHLLQNRAS-NAKFRGLKNMFSTAEAGADMAAESLSNF--------------PRPFDVVVLGMGN 139 (233)
T ss_dssp SSCTTSTTCHHHHHHHHTSSGGGG-GSEECCSCCSSSSHHHHHHHHHHHTTTS--------------CSSBSEEEECCCT
T ss_pred ccCCCChHHHHHHHHHHhhccCCc-cceEEcCCCCCCCHHHHHHHHHHHHHhc--------------CCCCCEEEEccCC
Confidence 699999999999999999999865 467777655 468999999999998653 5 89999999999
Q ss_pred cCcccccCCCCCCCccC---CceEEeccCCCCCCCceEEeChHHHhccCceEEEEcCCCHHHHHHHHHcCCCCCcccccc
Q 048634 79 DGHIASLFPGHPLLKEN---EKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQ 155 (175)
Q Consensus 79 DGH~AslfP~~~~l~~~---~~~v~~~~~~~~~p~~riTlt~~~i~~ar~v~~lv~G~~K~~~l~~~l~~~~~~~~~Pas 155 (175)
||||||||||++.+++. ..++.. .+.+++|++|||||++.|++||+|+|+++|++|+++++++++++.+.. +|+|
T Consensus 140 dGHias~fPg~~~L~~~~~~~~~~~~-~~~~~~P~~riTlt~~~I~~A~~i~ll~~G~~Ka~av~~~l~g~~~~~-~Pas 217 (233)
T 3nwp_A 140 DGHTCSWFPCSAELENALTTQALCVA-TNPTTAPHGRITLSKSAILNSRQIYLHLVGEQKLSVYRQALESDDVHA-MPIR 217 (233)
T ss_dssp TSCBTTBCTTCTTHHHHHHCCSSEEE-ECCSSSSSCEEEECHHHHHSBSCEEEEEESHHHHHHHHHHHTCCCTTT-CTTH
T ss_pred CCCeeecCCCCchhhhhcccCceEEE-CCCCCCCCceEECCHHHHHhhCeEEEEEECHHHHHHHHHHHhCCCCCC-ccHH
Confidence 99999999999865431 223432 356889999999999999999999999999999999999999987765 9999
Q ss_pred ccccCC----eEEEE
Q 048634 156 MALAEE----EFTWF 166 (175)
Q Consensus 156 ~l~~~~----~~~~~ 166 (175)
.|+.|+ .++|.
T Consensus 218 ~l~~h~~~~~~v~w~ 232 (233)
T 3nwp_A 218 AVLAQRKTPVDVFWS 232 (233)
T ss_dssp HHHSCSSSCEEEEEE
T ss_pred HHHhCCCCCcEEEeC
Confidence 998875 46663
No 11
>3lhi_A Putative 6-phosphogluconolactonase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.33A {Neisseria gonorrhoeae}
Probab=100.00 E-value=5.3e-43 Score=280.38 Aligned_cols=147 Identities=25% Similarity=0.422 Sum_probs=124.1
Q ss_pred CCCCCChhhHHHHHHHHhcCCCCCCCCCeEeCC-CCCCHH--HHHHHHHHHHHHhhccchhhccccCCCCcccEEEEccc
Q 048634 1 VVPKDHDDSNYKLAYDGFLSQVPITTGNVYAIN-DALSAE--GAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMG 77 (175)
Q Consensus 1 ~Vp~~~~~Sn~~~~~~~ll~~~~i~~~~~~~~~-~~~~~~--~~~~~y~~~l~~~~~~~~~~~~~~~~~~~~Dl~lLGmG 77 (175)
|||++|++||+++++++||+++++ +++++++. ...+++ ++|++|++.|++. |+||++|||||
T Consensus 72 ~vp~~~~~Sn~~~~~~~ll~~~~~-~~~~~p~~~~~~~~~~~~~~~~ye~~i~~~--------------~~~Dl~lLG~G 136 (232)
T 3lhi_A 72 IVPTNHADSNTGLVREYLLKNKAA-AAVWIPMVEDGKTETELHPDAVVDYALKHY--------------KQPDVLILGMG 136 (232)
T ss_dssp SSCTTSTTCHHHHHHHHTSSGGGG-GSEECCSSCTTCCGGGCCHHHHHHHHHHHC--------------CCCSEEEECCC
T ss_pred cCCCCChHHHHHHHHHHhccCCCc-cceEecCCCCCCChhhHHHHHHHHHHHhhC--------------CCCCEEEEccC
Confidence 699999999999999999999875 34555553 346888 8999999999864 68999999999
Q ss_pred ccCcccccCCCCCCCcc-----CCceEEeccCCCCCCCceEEeChHHHhccCceEEEEcCCCHHHHHHHHHcCCCCCccc
Q 048634 78 PDGHIASLFPGHPLLKE-----NEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLL 152 (175)
Q Consensus 78 ~DGH~AslfP~~~~l~~-----~~~~v~~~~~~~~~p~~riTlt~~~i~~ar~v~~lv~G~~K~~~l~~~l~~~~~~~~~ 152 (175)
+||||||||||++.+.+ ...++.. .+.+++|++|||||++.|++||+|+|+++|++|++++++++++ .+. .+
T Consensus 137 ~dGH~as~fPg~~~l~~~~~~~~~~~~~~-~~~~~~P~~riTlt~~~I~~A~~i~ll~~G~~Ka~av~~~l~g-~~~-~~ 213 (232)
T 3lhi_A 137 NDGHTASIFPKAPQFQTAIDGSAGVALVH-TTPVTAPHERISMTLDAIAHTGHVFLAIQGEEKKAVFDQAAQG-ENR-EY 213 (232)
T ss_dssp TTSCBTTBCTTCTTHHHHHCCTTCCCEEE-ECCSSSSSCEEEECHHHHHTCSEEEEEEESHHHHHHHHHHHTS-CCT-TS
T ss_pred CCCCeeecCCCChhhhhhhccccCcEEEe-CCCCCCCCceEEecHHHHHhcCeEEEEEECHHHHHHHHHHHhC-CCc-cC
Confidence 99999999999987643 2223332 3578899999999999999999999999999999999999998 555 49
Q ss_pred cccccccCC----eEEE
Q 048634 153 PVQMALAEE----EFTW 165 (175)
Q Consensus 153 Pas~l~~~~----~~~~ 165 (175)
|+|.|+.|+ .++|
T Consensus 214 Pas~l~~h~~~~~~v~w 230 (232)
T 3lhi_A 214 PISLVLNHQGVNCHVFY 230 (232)
T ss_dssp THHHHHTSTTCCEEEEE
T ss_pred cHHHHHhCCCCCcEEEe
Confidence 999998886 4556
No 12
>3e15_A Glucose-6-phosphate 1-dehydrogenase; 6-phosphogluconolactonase, malaria, carbohydrate metabolism, glucose metabolism, NADP, oxidoreductase,; HET: MSE; 2.00A {Plasmodium vivax}
Probab=100.00 E-value=6.1e-43 Score=289.96 Aligned_cols=160 Identities=23% Similarity=0.298 Sum_probs=137.5
Q ss_pred CCCCCChhhHHHHHHHHhcCCCCCCC-CCeEeCCCCCCHHHHHHHHHHHHHHhhccchhhccccCCCCcccEEEEccccc
Q 048634 1 VVPKDHDDSNYKLAYDGFLSQVPITT-GNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPD 79 (175)
Q Consensus 1 ~Vp~~~~~Sn~~~~~~~ll~~~~i~~-~~~~~~~~~~~~~~~~~~y~~~l~~~~~~~~~~~~~~~~~~~~Dl~lLGmG~D 79 (175)
|||++|++||+++++ +||++++|++ +|+|.+++..+++++|++|++.|++.+.. .|+||++|||||+|
T Consensus 101 ~vp~d~~~Sn~~~~~-~l~~~v~i~~~~~i~~~~g~~d~~~~a~~Ye~~I~~~~~~----------~g~~DL~LLGiG~D 169 (312)
T 3e15_A 101 YKRDDHKFSNYNNIK-FLFESLKINEKEQLYRPDTSKNIVECVRDYNEKIKNMVKK----------YTKVDIAILGMGSD 169 (312)
T ss_dssp CCTTCCTTCHHHHHH-HHHHHTTCCHHHHEECCCTTSCHHHHHHHHHHHHHHHHHH----------HCSCCEEEECCCTT
T ss_pred cCCCCChHHHHHHHH-HHHhcCCCCccccEEcCCCCcCHHHHHHHHHHHHHHHHhh----------cCCCcEEEEccCCC
Confidence 689999999999996 8999999997 79999998889999999999999865321 36899999999999
Q ss_pred CcccccCCCCCC------------CccCCc-------------------eEEeccCCCCCCCceEEeChHHHhccCceEE
Q 048634 80 GHIASLFPGHPL------------LKENEK-------------------WVTFIKDSPKPPPERITFTFPVINSSAYIAM 128 (175)
Q Consensus 80 GH~AslfP~~~~------------l~~~~~-------------------~v~~~~~~~~~p~~riTlt~~~i~~ar~v~~ 128 (175)
|||||||||+++ +++..+ ++.+..+.+++|++|||||++.|++||+|+|
T Consensus 170 GHiaslfPg~~~~~~~~~~~~t~~l~e~t~~~~~~~~s~~~~~~~~~~~~~~f~~~~~~pP~~rITlt~~~I~~Ak~v~~ 249 (312)
T 3e15_A 170 FHIASLFPNIFFNIYMNNYQNSYIYDESSIKVANSNDTSDNDNLDLLKEYVYFTTTNNFDVRKRITVSLDLLGNASSKIF 249 (312)
T ss_dssp SCBTTBCSSHHHHHHHHHTGGGSSSCGGGCCCCC---CCHHHHHTTCCCSEEEEECCSTTCSEEEEECHHHHHTCSEEEE
T ss_pred CceeecCCCCcccccccccccceeecHHHHHHhhcccccccccccccccceeeccCCCCCCCeEEEecHHHHhcCCeEEE
Confidence 999999999852 222211 2334467788889999999999999999999
Q ss_pred EEcCCCHHHHHHHHHc-CCCCC--ccccccccccCCeEEEEechhh
Q 048634 129 VVCGAGKSSAVQTALG-NNQNS--DLLPVQMALAEEEFTWFLDKDA 171 (175)
Q Consensus 129 lv~G~~K~~~l~~~l~-~~~~~--~~~Pas~l~~~~~~~~~~D~~A 171 (175)
+++|++|+++|+++++ ++.+. ..+|+|+|+.|+++++++|+.+
T Consensus 250 lv~G~~Ka~av~~~l~~g~vt~~~~~~PAS~Lq~Hp~~~vv~~~~~ 295 (312)
T 3e15_A 250 LLNSTDKLDLWKNMLLKSYVDVNYCLYPAVYLIDSMNTTVVTCGYT 295 (312)
T ss_dssp EECSHHHHHHHHHHHHHTTTTCCTTTCHHHHHHHTSCEEEEEESCT
T ss_pred EEcChHHHHHHHHHHHhCCCCCCcCccchHHHhhCCCEEEEEcCCc
Confidence 9999999999999999 87665 2499999999999999998875
No 13
>1ne7_A Glucosamine-6-phosphate isomerase; V-type like allosteric enzyme, conformational disorder, conformational differences, hydrolase; HET: GLC 16G AGP; 1.75A {Homo sapiens} SCOP: c.124.1.1
Probab=100.00 E-value=1.9e-39 Score=267.21 Aligned_cols=158 Identities=23% Similarity=0.385 Sum_probs=140.0
Q ss_pred CCCCChhhHHHHHHHHhcCCCCCCCCCeEeCCCC-CCHHHHHHHHHHHHHHhhccchhhccccCCCCcccEEEEcccccC
Q 048634 2 VPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDA-LSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDG 80 (175)
Q Consensus 2 Vp~~~~~Sn~~~~~~~ll~~~~i~~~~~~~~~~~-~~~~~~~~~y~~~l~~~~~~~~~~~~~~~~~~~~Dl~lLGmG~DG 80 (175)
||++|++||+++++++|++++++++.|+|.+++. .++++++++|++.|++. ++||++|||||+||
T Consensus 77 v~~~~~~Sn~~~~~~~l~~~~~~~~~~i~~p~~~~~~~e~~~~~ye~~i~~~--------------~~~Dl~lLGiG~dG 142 (289)
T 1ne7_A 77 LPRDHPESYHSFMWNNFFKHIDIHPENTHILDGNAVDLQAECDAFEEKIKAA--------------GGIELFVGGIGPDG 142 (289)
T ss_dssp SCTTSTTSHHHHHHHHTGGGSCCCGGGEECCCTTCSSHHHHHHHHHHHHHHT--------------TSCSEEEECCCTTC
T ss_pred CCCCcHHHHHHHHHHHhhccCCCCHHHEecCCCCCCCHHHHHHHHHHHHHhc--------------CCCCEEEEccCCCC
Confidence 8999999999999999999999999999999864 58999999999999874 47999999999999
Q ss_pred cccccCCCCCCCccCCceEEe-----------c-cCCCCCCCceEEeChHHHhccCceEEEEcCCCHHHHHHHHHcCCCC
Q 048634 81 HIASLFPGHPLLKENEKWVTF-----------I-KDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQN 148 (175)
Q Consensus 81 H~AslfP~~~~l~~~~~~v~~-----------~-~~~~~~p~~riTlt~~~i~~ar~v~~lv~G~~K~~~l~~~l~~~~~ 148 (175)
||||||||+++ .+..+++.. + .+.+.+|..|||||++.|++||+++++++|++|+++++++++++.+
T Consensus 143 H~aslfPg~~l-~~~~~~~~L~~~~~~~~~~~f~~~~~~vp~~~iTl~l~~l~~a~~vi~la~G~~Ka~ai~~al~g~~~ 221 (289)
T 1ne7_A 143 HIAFNEPGSSL-VSRTRVKTLAMDTILANARFFDGELTKVPTMALTVGVGTVMDAREVMILITGAHKAFALYKAIEEGVN 221 (289)
T ss_dssp CSTTCCTTCCT-TCCSEEEECCHHHHHHHGGGTTTCGGGSCSEEEECCHHHHHTSSCEEEEECSGGGHHHHHHHHTSCCC
T ss_pred cceecCCCCCC-ccccceEEcchhhhhhhhccccCCCCCCCCEEEECCHHHHhcCCEEEEEEcCHHHHHHHHHHHhCCCC
Confidence 99999999865 333344431 1 2456778999999999999999999999999999999999999876
Q ss_pred CccccccccccCCeEEEEechhhhcCC
Q 048634 149 SDLLPVQMALAEEEFTWFLDKDATSKL 175 (175)
Q Consensus 149 ~~~~Pas~l~~~~~~~~~~D~~Aa~~l 175 (175)
.. +|++.|+.|++++|++|++||++|
T Consensus 222 ~~-~Pas~l~~h~~~~li~D~~aA~~L 247 (289)
T 1ne7_A 222 HM-WTVSAFQQHPRTVFVCDEDATLEL 247 (289)
T ss_dssp TT-SGGGGGGGCSSEEEEEEGGGGTTS
T ss_pred cc-CchHHHccCCCEEEEEcHHHHhhc
Confidence 64 999999999999999999999875
No 14
>2bkx_A Glucosamine-6-phosphate deaminase; hydrolase, substrate inhibition, fructose-6-phosphate; HET: F6R; 1.4A {Bacillus subtilis} PDB: 2bkv_A*
Probab=100.00 E-value=1.7e-39 Score=260.36 Aligned_cols=159 Identities=24% Similarity=0.366 Sum_probs=138.6
Q ss_pred CCCCChhhHHHHHHHHhcCCCCCCCCCeEeCCC-CCCHHHHHHHHHHHHHHhhccchhhccccCCCCcccEEEEcccccC
Q 048634 2 VPKDHDDSNYKLAYDGFLSQVPITTGNVYAIND-ALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDG 80 (175)
Q Consensus 2 Vp~~~~~Sn~~~~~~~ll~~~~i~~~~~~~~~~-~~~~~~~~~~y~~~l~~~~~~~~~~~~~~~~~~~~Dl~lLGmG~DG 80 (175)
||.+|++||+.+++++|+++++++..++|.+++ ..+++++++.|++.|+.. ++||++|||||+||
T Consensus 72 v~~~~~~sn~~~~~~~l~~~~~~~~~~i~~p~~~~~~~~~~~~~y~~~i~~~--------------~~~Dl~llGiG~dg 137 (242)
T 2bkx_A 72 LSSDDPNSYHFYMNDRFFQHIDSKPSRHFIPNGNADDLEAECRRYEQLVDSL--------------GDTDIQLLGIGRNG 137 (242)
T ss_dssp CCTTSTTSHHHHHHHHTGGGSCCCGGGEECCCTTCSCHHHHHHHHHHHHHHT--------------TSCSEEEECCCTTS
T ss_pred CCCCchHHHHHHHHHHHhccCCCCHHHEEcCCCCCCCHHHHHHHHHHHHHhc--------------CCCCEEEECcCCCC
Confidence 899999999999999999999999999999985 478999999999999863 57999999999999
Q ss_pred cccccCCCCCCCccCC--------ceEE--eccCCCCCCCceEEeChHHHhccCceEEEEcCCCHHHHHHHHHcCCCCCc
Q 048634 81 HIASLFPGHPLLKENE--------KWVT--FIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSD 150 (175)
Q Consensus 81 H~AslfP~~~~l~~~~--------~~v~--~~~~~~~~p~~riTlt~~~i~~ar~v~~lv~G~~K~~~l~~~l~~~~~~~ 150 (175)
|+||||||+++.++.. .++. ++.+.+++|.+|||||++.|++||+++++++|++|+++++++++++.+..
T Consensus 138 h~a~l~p~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~p~~~itltl~~l~~a~~vi~va~G~~Ka~ai~~al~g~~~~~ 217 (242)
T 2bkx_A 138 HIGFNEPGTSFKSRTHVVTLNEQTRQANARYFPSIDSVPKKALTMGIQTILSSKRILLLISGKSKAEAVRKLLEGNISED 217 (242)
T ss_dssp CBTTBCTTCCTTCCSEEEECCHHHHHHHGGGSSSGGGSCSEEEECCHHHHHTSSCEEEEECSGGGHHHHHHHHHTCCCTT
T ss_pred cceeCCCCCccccCceEEeCCHHHHHHHhhhcCCCCCCCCccEEcCHHHHhhcCEEEEEEeChHHHHHHHHHHcCCCCCc
Confidence 9999999986543321 1000 12233567899999999999999999999999999999999999988764
Q ss_pred cccccccccCCeEEEEechhhhcCC
Q 048634 151 LLPVQMALAEEEFTWFLDKDATSKL 175 (175)
Q Consensus 151 ~~Pas~l~~~~~~~~~~D~~Aa~~l 175 (175)
+|+|.|+.|++++||+|++||++|
T Consensus 218 -~Pas~l~~~~~~~~~~D~~Aa~~l 241 (242)
T 2bkx_A 218 -FPASALHLHSDVTVLIDREAASLR 241 (242)
T ss_dssp -SGGGGGGGCSSEEEEEETTTTTTC
T ss_pred -ccHHHhccCCCEEEEEchHHhccC
Confidence 999999999999999999999876
No 15
>1fs5_A Glucosamine-6-phosphate deaminase; allosteric enzyme, entropic effects, aldose-ketose isomerase multiple conformers, isomerase; HET: 16G TLA; 1.73A {Escherichia coli} SCOP: c.124.1.1 PDB: 1cd5_A 1fqo_A* 1frz_A* 1dea_A* 1fs6_A 1fsf_A 1hor_A* 1hot_A* 2wu1_A* 1jt9_A
Probab=100.00 E-value=5.9e-38 Score=254.99 Aligned_cols=158 Identities=23% Similarity=0.354 Sum_probs=137.6
Q ss_pred CCCCChhhHHHHHHHHhcCCCCCCCCCeEeCCCC-CCHHHHHHHHHHHHHHhhccchhhccccCCCCcccEEEEcccccC
Q 048634 2 VPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDA-LSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDG 80 (175)
Q Consensus 2 Vp~~~~~Sn~~~~~~~ll~~~~i~~~~~~~~~~~-~~~~~~~~~y~~~l~~~~~~~~~~~~~~~~~~~~Dl~lLGmG~DG 80 (175)
||++|++||+.+++++|+++++++..++|.+++. .+++++++.|++.|++. ++||++|||||+||
T Consensus 77 v~~~~~~sn~~~~~~~l~~~~~~~~~~i~~p~~~~~~~e~~~~~y~~~l~~~--------------~~~Dl~llGiG~dG 142 (266)
T 1fs5_A 77 LPKEHPESYYSFMHRNFFDHVDIPAENINLLNGNAPDIDAECRQYEEKIRSY--------------GKIHLFMGGVGNDG 142 (266)
T ss_dssp CCTTSTTSHHHHHHHHTGGGSCCCGGGEECCCTTCSSHHHHHHHHHHHHHHH--------------CCCSEEEECCCTTC
T ss_pred CCCCCHHHHHHHHHHHhhccCCCCHHHEEeCCCCCCCHHHHHHHHHHHHHhc--------------CCCCEEEEccCCCC
Confidence 8999999999999999999999999999999865 58999999999999864 47999999999999
Q ss_pred cccccCCCCCCCccCCceEEe-----------c-cCCCCCCCceEEeChHHHhccCceEEEEcCCCHHHHHHHHHcCCCC
Q 048634 81 HIASLFPGHPLLKENEKWVTF-----------I-KDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQN 148 (175)
Q Consensus 81 H~AslfP~~~~l~~~~~~v~~-----------~-~~~~~~p~~riTlt~~~i~~ar~v~~lv~G~~K~~~l~~~l~~~~~ 148 (175)
|+||||||+++. +..+++.. + .+.+.+|..+||||++.|++||+++++++|++|+++++++++++.+
T Consensus 143 h~asl~pg~~~~-~~~~~~~l~~~~~~~~~~~f~~~~~~~p~~~itl~l~~l~~a~~vi~va~G~~Ka~ai~~al~g~~~ 221 (266)
T 1fs5_A 143 HIAFNEPASSLA-SRTRIKTLTHDTRVANSRFFDNDVNQVPKYALTVGVGTLLDAEEVMILVLGSQKALALQAAVEGCVN 221 (266)
T ss_dssp CSTTCCSSCCTT-CCSEEEECCHHHHHHHGGGTTTCGGGSCSEEEECCHHHHHTSSCEEEEECSGGGHHHHHHHHHSCCC
T ss_pred CeeecCCCCCCC-ccccEEEechhhhhhhhccccCCcCCCCcEEEECChHHHhcCCEEEEEecChHHHHHHHHHhcCCCC
Confidence 999999998653 33333331 1 1345567778888889999999999999999999999999999876
Q ss_pred CccccccccccCCeEEEEechhhhcCC
Q 048634 149 SDLLPVQMALAEEEFTWFLDKDATSKL 175 (175)
Q Consensus 149 ~~~~Pas~l~~~~~~~~~~D~~Aa~~l 175 (175)
.. +|++.++.|++++|++|++||++|
T Consensus 222 ~~-~Pas~l~~~~~~~li~D~~aA~~L 247 (266)
T 1fs5_A 222 HM-WTISCLQLHPKAIMVCDEPSTMEL 247 (266)
T ss_dssp SS-SGGGGGGGCSSEEEEECSGGGTTS
T ss_pred Cc-CChHHHccCCCEEEEEeHHHhhhc
Confidence 65 999999999999999999999875
No 16
>2ri0_A Glucosamine-6-phosphate deaminase; carbohydrate metabolism,; HET: BTB; 1.60A {Streptococcus mutans} PDB: 2ri1_A*
Probab=100.00 E-value=5.1e-37 Score=245.02 Aligned_cols=155 Identities=19% Similarity=0.330 Sum_probs=132.3
Q ss_pred CCCCChhhHHHHHHHHhcCCCCCCCCCeEeCCCC-CCHHHHHHHHHHHHHHhhccchhhccccCCCCcccEEEEcccccC
Q 048634 2 VPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDA-LSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDG 80 (175)
Q Consensus 2 Vp~~~~~Sn~~~~~~~ll~~~~i~~~~~~~~~~~-~~~~~~~~~y~~~l~~~~~~~~~~~~~~~~~~~~Dl~lLGmG~DG 80 (175)
||++|++||+.+++++|+++++++.. |.+.+. .+++++++.|++.|++ .+||++|||||+||
T Consensus 68 v~~~~~~sn~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~y~~~i~~---------------~~~Dl~llGiG~dg 130 (234)
T 2ri0_A 68 LSADDKQSYAYFMKQNLFAAKPFKKS--YLPNGLAADLAKETEYYDQILAQ---------------YPIDLQILGIGRNA 130 (234)
T ss_dssp CCTTSTTSHHHHHHHHTTTTSCCSEE--ECCCTTCSCHHHHHHHHHHHHHH---------------SCCSEEEECCCTTS
T ss_pred CCCCChHHHHHHHHHHHhccCCCcHh--hcCCCCCCCHHHHHHHHHHHHHh---------------CCCCEEEEccCCCC
Confidence 89999999999999999999998777 434443 5788899999999976 26999999999999
Q ss_pred cccccCCCCCCCccCCceEEec----------cCC-CCCCCceEEeChHHHhccCceEEEEcCCCHHHHHHHHHcCCCCC
Q 048634 81 HIASLFPGHPLLKENEKWVTFI----------KDS-PKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNS 149 (175)
Q Consensus 81 H~AslfP~~~~l~~~~~~v~~~----------~~~-~~~p~~riTlt~~~i~~ar~v~~lv~G~~K~~~l~~~l~~~~~~ 149 (175)
|+||||||+++. +..+++... .+. +.+|.+|||||++.|++||+++++++|++|+++++++++++.+.
T Consensus 131 h~a~l~p~~~~~-~~~~~~~l~~~~~~~~~~~fd~~~~~~~~~itl~l~~l~~a~~vi~va~G~~Ka~ai~~al~g~~~~ 209 (234)
T 2ri0_A 131 HIGFNEPGTAFS-SQTHLVDLTPSTIAANSRFFEKAEDVPKQAISMGLASIMSAKMILLMAFGEEKAEAVAAMVKGPVTE 209 (234)
T ss_dssp CBTTBCTTCCTT-CCSEEEECCHHHHHHHHTTCSCGGGSCCEEEECCHHHHHTSSEEEEEECSGGGHHHHHHHHHSCCCT
T ss_pred CchhcCCCCCCC-CCceEEECCHHHHHHhhhhcCCccCCCCceEEeCHHHHhhcCEEEEEEeChHHHHHHHHHHcCCCCC
Confidence 999999998643 333344321 122 44688999999999999999999999999999999999998876
Q ss_pred ccccccccccCCeEEEEechhhhcCC
Q 048634 150 DLLPVQMALAEEEFTWFLDKDATSKL 175 (175)
Q Consensus 150 ~~~Pas~l~~~~~~~~~~D~~Aa~~l 175 (175)
. +|+|.|+.|++++||+|++||++|
T Consensus 210 ~-~Pas~l~~~~~~~~~~D~~Aa~~l 234 (234)
T 2ri0_A 210 E-IPASILQTHPKVILIVDEKAGAGI 234 (234)
T ss_dssp T-SGGGGGGGCSSEEEEEETTTTTTC
T ss_pred c-cchHHHhhCCCEEEEEchHHhccC
Confidence 5 999999999999999999999876
No 17
>2r5f_A Transcriptional regulator, putative; transcription regulator, sugar-binding domain, structural GE PFAM04198, PSI-2; 2.10A {Pseudomonas syringae PV} SCOP: c.124.1.8
Probab=99.68 E-value=3.1e-17 Score=133.05 Aligned_cols=142 Identities=13% Similarity=0.081 Sum_probs=95.7
Q ss_pred CCCCChhhHHHHHHHHhcCCCCCCCCCeEeCCCC-----CCHHHHHHHHHHHHHHhhccchhhccccCCCCcccEEEEcc
Q 048634 2 VPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDA-----LSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGM 76 (175)
Q Consensus 2 Vp~~~~~Sn~~~~~~~ll~~~~i~~~~~~~~~~~-----~~~~~~~~~y~~~l~~~~~~~~~~~~~~~~~~~~Dl~lLGm 76 (175)
++ +|++|+..+|.++|+++++++..++|.+... .+...++..|++.|+.. ++.|++|+||
T Consensus 96 l~-~~~~~~~~~~~~~la~~~~~~~~~l~~P~~~~~~~~~~~~~~~~~~~~~l~~~--------------~~~Di~l~GI 160 (264)
T 2r5f_A 96 VG-NKGAFEATLLTQRLATLLNCPAFLLPSQSIEQSVESKQRIVEMEEVKEVLHRF--------------DSITLAIVGI 160 (264)
T ss_dssp CC---CHHHHHHHHHHHHHHHTSCEECCCCC----------CCHHHHHHHHHHHHT--------------TTCCEEEECC
T ss_pred CC-CccccCHHHHHHHHHHHhCCeeEEeeCCcccCCHHHHHHHHcChHHHHHHHHH--------------hcCCEEEEec
Confidence 45 7899999999999999999988888866432 24456789999999764 5799999999
Q ss_pred ccc---CcccccCCCCCCCccCC-------ceE-----Eecc-CCCCCC----CceEEeChHHHhccCceEEEEcCCCHH
Q 048634 77 GPD---GHIASLFPGHPLLKENE-------KWV-----TFIK-DSPKPP----PERITFTFPVINSSAYIAMVVCGAGKS 136 (175)
Q Consensus 77 G~D---GH~AslfP~~~~l~~~~-------~~v-----~~~~-~~~~~p----~~riTlt~~~i~~ar~v~~lv~G~~K~ 136 (175)
|.+ ||+ ++ ||+ ++++.+ ..+ -++. +...+| .+.|||++..|++++++++++.|++|+
T Consensus 161 G~~~~~~~i-~~-~g~-~~~~~~~~~L~~~~avgd~~~rffd~~G~~V~~~~~~r~i~i~l~~l~~~~~vI~vA~G~~Ka 237 (264)
T 2r5f_A 161 GELEPSQLL-RN-SGN-YYTEDMLRVLAERGAVGDICLRYFDAQGKPVLEEDEEFVVSMGLGKLRSINRVLGLAGGVRKV 237 (264)
T ss_dssp EECC----------------------CTTTTCCEEETTEEECTTSCBC-------CEECCHHHHHTSSEEEEECCCGGGH
T ss_pred CCCCCCccH-hh-cCC-CCCHHHHHHHHHCCcEEEeEhhhhccCCCCCCCccccceecCCHHHHcCCCCEEEEEcCHHHH
Confidence 987 999 76 774 322211 001 0121 223456 789999999999999999999999999
Q ss_pred HHHHHHHcCCCCCccccccccccCCeEEEEechhhhcCC
Q 048634 137 SAVQTALGNNQNSDLLPVQMALAEEEFTWFLDKDATSKL 175 (175)
Q Consensus 137 ~~l~~~l~~~~~~~~~Pas~l~~~~~~~~~~D~~Aa~~l 175 (175)
++++.+|+++.. .++++|++||+.|
T Consensus 238 ~AI~aal~g~~~--------------~~LItDe~aA~~L 262 (264)
T 2r5f_A 238 QAIKGALLGGYL--------------DVLITDVGTARGL 262 (264)
T ss_dssp HHHHHHHHTTCC--------------SEEEEEHHHHHHH
T ss_pred HHHHHHHhcCCC--------------CEEEECHHHHHHH
Confidence 999999998641 2789999998753
No 18
>2okg_A Central glycolytic gene regulator; alpha/beta/alpha sandwich, rossmann-like fold, structural genomics, PSI-2, protein structure initiative; HET: MSE G3H; 1.65A {Bacillus subtilis} SCOP: c.124.1.8 PDB: 3bxe_A* 3bxf_A* 3bxg_A* 3bxh_A*
Probab=99.65 E-value=1.6e-17 Score=134.04 Aligned_cols=141 Identities=12% Similarity=0.133 Sum_probs=105.3
Q ss_pred CCCCChhhHHHHHHHHhcCCCCCCCCCeEeCCCCCC----HHHHHHHHHHHHHHhhccchhhccccCCCCcccEEEEccc
Q 048634 2 VPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALS----AEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMG 77 (175)
Q Consensus 2 Vp~~~~~Sn~~~~~~~ll~~~~i~~~~~~~~~~~~~----~~~~~~~y~~~l~~~~~~~~~~~~~~~~~~~~Dl~lLGmG 77 (175)
++. |++|+..+|.++|+++++++..++|.++...+ ...++..|++.|+.. ++.|++|+|||
T Consensus 93 l~~-~~~~~~~~~~~~la~~~~~~~~~l~~P~~~~~~~~~~l~~~~~~~~~l~~~--------------~~~Di~l~GIG 157 (255)
T 2okg_A 93 LGE-DVKNQANTICAHMAEKASGTYRLLFVPGQLSQGAYSSIIEEPSVKEVLNTI--------------KSASMLVHGIG 157 (255)
T ss_dssp CC----CCHHHHHHHHHHHHHTCEECCCCCCCSCCHHHHHHHHTSHHHHHHHHHH--------------HTCSEEEECCE
T ss_pred CCC-CcccCHHHHHHHHHHHHCCeeEEEeccccCCHHHHHHHHcChHHHHHHHHH--------------hcCCEEEEecC
Confidence 355 89999999999999999999899988776431 124567888888764 47999999999
Q ss_pred ccCcccccCCCCCCCccC-------CceE-----Eecc-CCCCCC-CceEEeChHHHhccCceEEEEcCCCHHHHHHHHH
Q 048634 78 PDGHIASLFPGHPLLKEN-------EKWV-----TFIK-DSPKPP-PERITFTFPVINSSAYIAMVVCGAGKSSAVQTAL 143 (175)
Q Consensus 78 ~DGH~AslfP~~~~l~~~-------~~~v-----~~~~-~~~~~p-~~riTlt~~~i~~ar~v~~lv~G~~K~~~l~~~l 143 (175)
.+||++ +||. +++. ...+ -++. +...+| .+.|||++..|++++++++++.|++|+++++.+|
T Consensus 158 ~~~~i~--~~g~--~~~~~~~~L~~~~avg~~~~rffd~~G~~V~~~~~igi~l~~i~~~~~vI~vA~G~~Ka~AI~aal 233 (255)
T 2okg_A 158 EAKTMA--QRRN--TPLEDLKKIDDNDAVTEAFGYYFNADGEVVHKVHSVGMQLDDIDAIPDIIAVAGGSSKAEAIEAYF 233 (255)
T ss_dssp EHHHHH--HHTT--CCHHHHHHHHHTTEEEEETTEEEETTSCEEEECSEEECCGGGGGGCSEEEEECCSGGGHHHHHHHT
T ss_pred Cchhhh--hcCC--CCHHHHHHHHHCCeEEEeehhhhccCCCCccCCceecCCHHHHhCCCCEEEEEcCHHHHHHHHHHH
Confidence 999997 7873 2211 0111 0122 223345 6899999999999999999999999999999999
Q ss_pred cCCCCCccccccccccCCeEEEEechhhhcCC
Q 048634 144 GNNQNSDLLPVQMALAEEEFTWFLDKDATSKL 175 (175)
Q Consensus 144 ~~~~~~~~~Pas~l~~~~~~~~~~D~~Aa~~l 175 (175)
+++. ..++++|++||+.|
T Consensus 234 ~g~~--------------~~~LItDe~aA~~L 251 (255)
T 2okg_A 234 KKPR--------------NTVLVTDEGAAKKL 251 (255)
T ss_dssp TSCC--------------CEEEEEEHHHHHHH
T ss_pred hCCC--------------CCEEEECHHHHHHH
Confidence 9853 14789999998753
No 19
>2gnp_A Transcriptional regulator; structural genomics, MCSG, APC84799, streptococcus pneumonia PSI, protein structure initiative; 1.65A {Streptococcus pneumoniae} SCOP: c.124.1.8
Probab=99.59 E-value=6.3e-16 Score=125.45 Aligned_cols=145 Identities=12% Similarity=0.077 Sum_probs=108.4
Q ss_pred CCCCChhhHHHHHHHHhcCCCCCCCCCeEeCCCCCC-----HHHHHHHHHHHHHHhhccchhhccccCCCCcccEEEEcc
Q 048634 2 VPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALS-----AEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGM 76 (175)
Q Consensus 2 Vp~~~~~Sn~~~~~~~ll~~~~i~~~~~~~~~~~~~-----~~~~~~~y~~~l~~~~~~~~~~~~~~~~~~~~Dl~lLGm 76 (175)
++.+|++|+..+|.++|+++++++..++|.+..-.+ ...++..|++.|+.. ++.|++|+||
T Consensus 93 l~~~~~~~~~~~~~~~la~~~~~~~~~l~~P~~~~~~~~~~~~~~~~~~~~~l~~~--------------~~~Di~l~GI 158 (266)
T 2gnp_A 93 PSHIHAKYHVNTLIYEMSRKFHGECTFMNATIVQENKLLADGILQSRYFENLKNSW--------------KDLDIAVVGI 158 (266)
T ss_dssp CTTSCGGGSHHHHHHHHHHHHTCEECCCCSCSBCSSHHHHHHHHTSTTTHHHHHHT--------------TSCSEEEECC
T ss_pred CCCCccccCHHHHHHHHHHHhCCeeEEEeCCcccCCHHHHHHHHcCHHHHHHHHHH--------------HhCCEEEEec
Confidence 467889999999999999999998888887664333 344567788888753 5799999999
Q ss_pred cccCccccc-CCCCCC------CccCCce--E--Eecc-CCCCCC----CceEEeChHHHhccCceEEEEcCCCHHHHHH
Q 048634 77 GPDGHIASL-FPGHPL------LKENEKW--V--TFIK-DSPKPP----PERITFTFPVINSSAYIAMVVCGAGKSSAVQ 140 (175)
Q Consensus 77 G~DGH~Asl-fP~~~~------l~~~~~~--v--~~~~-~~~~~p----~~riTlt~~~i~~ar~v~~lv~G~~K~~~l~ 140 (175)
|.+||-+++ +||... +.+.... + -++. +...+| .+.|||++..|++++++++++.|++|+++++
T Consensus 159 G~~~~~~~~~~~g~~s~~~~~~L~~~~avgd~~~rffd~~G~~V~~~~~~r~i~i~l~~i~~~~~vI~vA~G~~Ka~AI~ 238 (266)
T 2gnp_A 159 GDFSNKGKHQWLDMLTEDDFKELTKVKTVGEICCRFFDSKGKEVYENLQERTIAISLEDLKNIPQSLAVAYGDTKVSSIL 238 (266)
T ss_dssp EECSHHHHHTTTTTSCHHHHHHHHHTTCCEEETTEEECTTSCCCCHHHHTTBCBCCHHHHTTSSEEEEECCSGGGHHHHH
T ss_pred CCCCCCCcchhcCCCCHHHHHHHHHCCeEEEEEchhhccCCCCCCCccccceecCCHHHHcCCCCEEEEecChhhHHHHH
Confidence 999985544 344211 1111100 0 1122 334567 7899999999999999999999999999999
Q ss_pred HHHcCCCCCccccccccccCCeEEEEechhhhcC
Q 048634 141 TALGNNQNSDLLPVQMALAEEEFTWFLDKDATSK 174 (175)
Q Consensus 141 ~~l~~~~~~~~~Pas~l~~~~~~~~~~D~~Aa~~ 174 (175)
.+|+++.. .++++|++||+.
T Consensus 239 aal~g~~~--------------~~LItDe~aA~~ 258 (266)
T 2gnp_A 239 SVLRANLV--------------NHLITDKNTILK 258 (266)
T ss_dssp HHHHTTCC--------------SEEEEEHHHHHH
T ss_pred HHHhcCCC--------------CEEEECHHHHHH
Confidence 99998641 278999999875
No 20
>2w48_A Sorbitol operon regulator; SORC, activator, repressor, DNA-binding, transcription, transcription regulator, transcription regulation; 3.20A {Klebsiella pneumoniae}
Probab=99.58 E-value=1.6e-15 Score=125.46 Aligned_cols=142 Identities=11% Similarity=0.077 Sum_probs=104.7
Q ss_pred CCChhhHHHHHHHHhcCCCCCCCCCeEeCCCCCCH-----HHHHHHHHHHHHHhhccchhhccccCCCCcccEEEEcccc
Q 048634 4 KDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSA-----EGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGP 78 (175)
Q Consensus 4 ~~~~~Sn~~~~~~~ll~~~~i~~~~~~~~~~~~~~-----~~~~~~y~~~l~~~~~~~~~~~~~~~~~~~~Dl~lLGmG~ 78 (175)
.+|++||..++.+.|++++++...++|.+....+. ..++..|++.|+.. .++|++++|+|
T Consensus 149 ~~~~~~~~~~i~~~la~~~~~~~~~l~~P~~~~~~~~~~~l~~~~~~~~~l~~~--------------~~~DiailGIG- 213 (315)
T 2w48_A 149 KLESRYHVNTLTYGAAARLKAESHLADFPALLDNPLIRNGIMQSQHFKTISSYW--------------DSLDVALVGIG- 213 (315)
T ss_dssp SSCGGGCHHHHHHHHHHHTTCEECCCCSBSBCSSHHHHHHHHHSHHHHHHHHHH--------------TTCSEEEECCB-
T ss_pred CCccccCHHHHHHHHHHHHCCceeEeeCCcccCCHHHHHHHHhChHHHHHHHHH--------------hcCCEEEEccC-
Confidence 67899999999999999998877777765443222 23457888888764 47999999999
Q ss_pred cCcccccCC-CCCCCccC-------CceE-----Eecc-CCCCCC----CceEEeChHHHhccCceEEEEcCCCHHHHHH
Q 048634 79 DGHIASLFP-GHPLLKEN-------EKWV-----TFIK-DSPKPP----PERITFTFPVINSSAYIAMVVCGAGKSSAVQ 140 (175)
Q Consensus 79 DGH~AslfP-~~~~l~~~-------~~~v-----~~~~-~~~~~p----~~riTlt~~~i~~ar~v~~lv~G~~K~~~l~ 140 (175)
||++++-| +++..++. ...+ -++. +...+| .+.|||++..|++++++++++.|++|+++++
T Consensus 214 -g~~~~~g~~~~~~~~~~~~~~L~~~~avg~~~~rffd~~g~~v~~~~~~~~i~~~l~~i~~~~~ii~vA~G~~Ka~Ai~ 292 (315)
T 2w48_A 214 -SPAIRDGANWHAFYGSEESDDLNARHVAGDICSRFYDINGGLVDTNMSEKTLSIEMAKLRQARYSIGIAMGEEKYSGIL 292 (315)
T ss_dssp -CTTCCSSSCHHHHHCTHHHHHHHHTTEEEEETTEEEETTSCBCCCSSGGGBCBCCHHHHHTSSEEEEECCCGGGHHHHH
T ss_pred -cchhhcCccccccCCHHHHHHHHHCCcEEEEECceECCCCCEeCCccccceecCCHHHHhCCCCEEEEecChHhHHHHH
Confidence 99999854 00111110 0111 0121 223456 7799999999999999999999999999999
Q ss_pred HHHcCCCCCccccccccccCCeEEEEechhhhcCC
Q 048634 141 TALGNNQNSDLLPVQMALAEEEFTWFLDKDATSKL 175 (175)
Q Consensus 141 ~~l~~~~~~~~~Pas~l~~~~~~~~~~D~~Aa~~l 175 (175)
.+|+++.. .++++|++||+.|
T Consensus 293 ~al~g~~~--------------~~LitDe~aA~~l 313 (315)
T 2w48_A 293 GALHGRYI--------------NCLVTNRETAELL 313 (315)
T ss_dssp HHHHTTSC--------------SEEEEEHHHHHHH
T ss_pred HHHhCCCC--------------CEEEECHHHHHHH
Confidence 99998631 2789999998753
No 21
>2o0m_A Transcriptional regulator, SORC family; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Enterococcus faecalis} SCOP: c.124.1.8
Probab=99.54 E-value=5.5e-16 Score=129.88 Aligned_cols=142 Identities=12% Similarity=0.116 Sum_probs=105.1
Q ss_pred CCCCChhhHHHHHHHHhcCCCCCCCCCeEeCCCCCC----HHHHHHHHHHHHHHhhccchhhccccCCCCcccEEEEccc
Q 048634 2 VPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALS----AEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMG 77 (175)
Q Consensus 2 Vp~~~~~Sn~~~~~~~ll~~~~i~~~~~~~~~~~~~----~~~~~~~y~~~l~~~~~~~~~~~~~~~~~~~~Dl~lLGmG 77 (175)
++. |++||..++.+.|++++++...++|.+....+ ...++..|++.|+.. .++|++++|+|
T Consensus 180 l~~-~~~~~~~~i~~~la~~~~~~~~~l~~P~~~~~~~~~~l~~~~~~~~~l~~~--------------~~~DiailGIG 244 (345)
T 2o0m_A 180 IGE-AVSVQANSISAVMANKTGGNYRALYVPEQLSRETYNSLLQEPSIQEVLTLI--------------SHANCVVHSIG 244 (345)
T ss_dssp CCC-CGGGSHHHHHHHHHHHHTCEECCCCCCSSCCHHHHHHHHTCHHHHHHHHHH--------------HTCSEEEECCE
T ss_pred CCC-CcccCHHHHHHHHHHHhCCceEEEeccccCCHHHHHHHHhChHHHHHHHHH--------------HcCCEEEEccC
Confidence 355 89999999999999998888888776655431 113467888888764 37999999999
Q ss_pred ccCcccccCCCCCC------CccCCc--eE--Eecc-CCCCCC-CceEEeChHHHhccCceEEEEcCCCHHHHHHHHHcC
Q 048634 78 PDGHIASLFPGHPL------LKENEK--WV--TFIK-DSPKPP-PERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGN 145 (175)
Q Consensus 78 ~DGH~AslfP~~~~------l~~~~~--~v--~~~~-~~~~~p-~~riTlt~~~i~~ar~v~~lv~G~~K~~~l~~~l~~ 145 (175)
.+||++ +||... +.+... .+ -++. +...+| .+.|||++..|++++++++++.|++|+++++.++++
T Consensus 245 ~~~~i~--~~g~~~~~~~~~L~~~~avg~~~~~ffd~~g~~v~~~~~i~i~l~~l~~~~~vi~vA~G~~Ka~Ai~~al~g 322 (345)
T 2o0m_A 245 RALHMA--ARRKMSDDEMVMLKQKNAVAESFGYFFDEEGKVVYKIPRIGLQLKNLQEIPYVVAIAGGKTKAKAIRAYMKN 322 (345)
T ss_dssp EHHHHH--HHTTCCHHHHHHHHHTTCCEEETTEEECTTSCEEEECCCSBCCGGGGGGCSEEEEECCSGGGHHHHHHHHTT
T ss_pred Cchhhh--hcCCCCHHHHHHHHHCCeEEEeeccccccCCCCcCCCceecCCHHHHcCCCCEEEEEcChHHHHHHHHHHhC
Confidence 999987 777311 111110 00 0121 222345 678999999999999999999999999999999998
Q ss_pred -CCCCccccccccccCCeEEEEechhhhcC
Q 048634 146 -NQNSDLLPVQMALAEEEFTWFLDKDATSK 174 (175)
Q Consensus 146 -~~~~~~~Pas~l~~~~~~~~~~D~~Aa~~ 174 (175)
+.. .++++|++||+.
T Consensus 323 ~~~~--------------~~LitDe~aA~~ 338 (345)
T 2o0m_A 323 APKQ--------------TWLITDEAAANE 338 (345)
T ss_dssp SCTT--------------CEEEEEHHHHHH
T ss_pred CCCC--------------eEEEECHHHHHH
Confidence 642 778999999875
No 22
>3nze_A Putative transcriptional regulator, sugar-binding; structural genomics, PSI-2, protein structure initiative; 1.70A {Arthrobacter aurescens} SCOP: c.124.1.0
Probab=99.00 E-value=5.9e-10 Score=90.29 Aligned_cols=140 Identities=14% Similarity=0.098 Sum_probs=89.9
Q ss_pred CCCChh-hHHHHHHHHhcCCCCCCCCCeEeCCCCCCHHHH-----HHHHHHHHHHhhccchhhccccCCCCcccEEEEcc
Q 048634 3 PKDHDD-SNYKLAYDGFLSQVPITTGNVYAINDALSAEGA-----AEDYETCLKHLTKSNILATSAATGFPKFDLMLLGM 76 (175)
Q Consensus 3 p~~~~~-Sn~~~~~~~ll~~~~i~~~~~~~~~~~~~~~~~-----~~~y~~~l~~~~~~~~~~~~~~~~~~~~Dl~lLGm 76 (175)
+.+++. ++...+.+.|.+++.....++|.+..-.+++.. ...|++.++.. ...|++|+||
T Consensus 93 ~~~~~~~~~~n~i~~~lA~~~~~~~~~l~~P~~~~s~~~~~~l~~~~~i~~~l~~~--------------~~~Diai~GI 158 (267)
T 3nze_A 93 NMQTTGITYASDIMRRFGSAYGARVEQFPVPAFFDHASTKTAMWNERSVQRILDLQ--------------ARMSIAIFGV 158 (267)
T ss_dssp CTTSCSHHHHHHHHHHHHHHHTCEEECCCSCSSCSSHHHHHHHTTCHHHHHHHHHH--------------HTCSEEEECC
T ss_pred CCCccccccHHHHHHHHHHHhCCeEEEeeCCEEcCCHHHHHHHHhChHHHHHHHHH--------------hcCCEEEEec
Confidence 445555 444577788888888776677765543344321 25666666543 3689999999
Q ss_pred cccCcccccCCCCCCC-----ccC-------CceE-----EeccCC-CCCC----CceEEeChHHHhccCceEEEEcCCC
Q 048634 77 GPDGHIASLFPGHPLL-----KEN-------EKWV-----TFIKDS-PKPP----PERITFTFPVINSSAYIAMVVCGAG 134 (175)
Q Consensus 77 G~DGH~AslfP~~~~l-----~~~-------~~~v-----~~~~~~-~~~p----~~riTlt~~~i~~ar~v~~lv~G~~ 134 (175)
|..+| +|++... ++. ...| .++... ..++ .+.|||++..|.+++++++++.|++
T Consensus 159 G~~~~----~~~s~~~~~g~~s~~~~~~L~~~gaVGdi~~~ffd~~G~~v~~~~~~r~i~~~l~~l~~~~~vi~vA~G~~ 234 (267)
T 3nze_A 159 GSVDS----DYPSHVYAGGYLDEHDLTMLAADDVVGDVATVFFRSDGSSDGITLNERSTGPSHEQLRQVRRRICVVSGAS 234 (267)
T ss_dssp EECC---------CCCTTSCCCHHHHHHHHHTTEEEEETTEEEETTSCCTTCGGGGGCCSCCHHHHHTSSEEEEEECCGG
T ss_pred CCCCC----CCCChHHHcCCCCHHHHHHHHHCCcEEEEecccccCCCCCCCcchhcceecCChHHHccCCeEEEEeCChH
Confidence 99997 3333221 110 0111 112111 1222 6689999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCccccccccccCCeEEEEechhhhcC
Q 048634 135 KSSAVQTALGNNQNSDLLPVQMALAEEEFTWFLDKDATSK 174 (175)
Q Consensus 135 K~~~l~~~l~~~~~~~~~Pas~l~~~~~~~~~~D~~Aa~~ 174 (175)
|+++++.+|+++- --++++|+.+|..
T Consensus 235 Ka~Ai~aal~g~~--------------~~~LITDe~tA~~ 260 (267)
T 3nze_A 235 KINGLQGALAAGL--------------ATDLILDEASARR 260 (267)
T ss_dssp GHHHHHHHHHTTC--------------CSEEEEEHHHHHH
T ss_pred HHHHHHHHHhcCC--------------CCEEEeCHHHHHH
Confidence 9999999999753 1345788888764
No 23
>3efb_A Probable SOR-operon regulator; alpha-beta-alpha sandwich, center for structural genomics of infectious diseases, csgid, transcription; HET: MSE; 2.00A {Shigella flexneri 2A} SCOP: c.124.1.8
Probab=98.55 E-value=4.9e-08 Score=78.86 Aligned_cols=141 Identities=8% Similarity=-0.013 Sum_probs=87.9
Q ss_pred CChhhHHHHHHHHhcCCCCCCCCCeEeCCCCCCHHH-----HHHHHHHHHHHhhccchhhccccCCCCcccEEEEccccc
Q 048634 5 DHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEG-----AAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPD 79 (175)
Q Consensus 5 ~~~~Sn~~~~~~~ll~~~~i~~~~~~~~~~~~~~~~-----~~~~y~~~l~~~~~~~~~~~~~~~~~~~~Dl~lLGmG~D 79 (175)
++..++...+.+.|-+++......+|.+..-.+++. ....|++.++.. ...|++|+|+|..
T Consensus 101 ~~~~~~~n~i~~~lA~~~~~~~~~l~aP~~~~~~~~~~~l~~~~~i~~vl~~~--------------~~aDiai~GIG~~ 166 (266)
T 3efb_A 101 LESRYHVNTLTYSAAAKLKGESHLADFPALLDNPLIRNGIMQSQHFKTISAYW--------------DNLDIALVGIGSP 166 (266)
T ss_dssp SCGGGCHHHHHHHHHHHTTCEECCCCSBSBCSSHHHHHHHHTSHHHHHHHHHH--------------HTCSEEEECCBCC
T ss_pred CccccCHHHHHHHHHHHhCCeEEEEeCCeecCCHHHHHHHHhChHHHHHHHHH--------------hcCCEEEEecCCC
Confidence 456666666777888888877777776654444431 125555655543 3689999999986
Q ss_pred CcccccCCCCCCCcc--------CCc---eE-EeccCCCC-CC----CceEEeChHHHhccCceEEEEcCCCHHHHHHHH
Q 048634 80 GHIASLFPGHPLLKE--------NEK---WV-TFIKDSPK-PP----PERITFTFPVINSSAYIAMVVCGAGKSSAVQTA 142 (175)
Q Consensus 80 GH~AslfP~~~~l~~--------~~~---~v-~~~~~~~~-~p----~~riTlt~~~i~~ar~v~~lv~G~~K~~~l~~~ 142 (175)
.--.+++-. ..+++ ... .. .++..... ++ .+.|||++..|.++++++.++.|++|+++++.+
T Consensus 167 ~~~~~~~~~-g~~s~~~~~~L~~~gaVGdi~~~ffd~~G~~v~~~~~~r~i~~~l~~l~~~~~~i~va~G~~Ka~Ai~aa 245 (266)
T 3efb_A 167 AIRDGANWH-AFYGGEESDDLNARQVAGDICSRFFDIHGAMVETNMSEKTLSIEMNKLKQARYSIGIAMSEEKYSGIIGA 245 (266)
T ss_dssp C----------CSCHHHHHHHHHTTCCEEETTEEECTTSCBCCCTTGGGBCBCCHHHHHTSSEEEEECCCSCSSCHHHHH
T ss_pred CCCchhHHh-cCCCHHHHHHHHHCCcEEEEecccccCCCCCCCcchhcceecCCHHHHhCCCCEEEEecChHHHHHHHHH
Confidence 432222210 01111 110 00 11211112 22 368999999999999999999999999999999
Q ss_pred HcCCCCCccccccccccCCeEEEEechhhhcC
Q 048634 143 LGNNQNSDLLPVQMALAEEEFTWFLDKDATSK 174 (175)
Q Consensus 143 l~~~~~~~~~Pas~l~~~~~~~~~~D~~Aa~~ 174 (175)
|+++. --++++|+.+|..
T Consensus 246 l~g~~--------------~~~LITDe~tA~~ 263 (266)
T 3efb_A 246 LRGKY--------------INCLVTNSSTAEL 263 (266)
T ss_dssp HHTTS--------------CSEEEEEHHHHHH
T ss_pred HhcCC--------------CCEEEeCHHHHHH
Confidence 99753 1345788888764
No 24
>3kv1_A Transcriptional repressor; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.70A {Vibrio fischeri} SCOP: c.124.1.0
Probab=98.39 E-value=8.8e-08 Score=77.44 Aligned_cols=144 Identities=10% Similarity=0.047 Sum_probs=87.7
Q ss_pred CCCChhhHHHHHHHHhcCCCCCCCCCeEeCCCCCCHHH-----HHHHHHHHHHHhhccchhhccccCCCCcccEEEEccc
Q 048634 3 PKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEG-----AAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMG 77 (175)
Q Consensus 3 p~~~~~Sn~~~~~~~ll~~~~i~~~~~~~~~~~~~~~~-----~~~~y~~~l~~~~~~~~~~~~~~~~~~~~Dl~lLGmG 77 (175)
+.+++.++...+.+.|-+++......+|.+..-.+++. ....|++.++.. ...|++|+|||
T Consensus 92 ~~~~~~~~~~~i~~~lA~~~~~~~~~l~~P~~~~~~~~~~~l~~~~~i~~vl~~~--------------~~aDiai~GIG 157 (267)
T 3kv1_A 92 HRSGDIINADHICRRLAKKYGGSSETLYAPAYVNDPSLRSAFMEHATIKETLSQA--------------RKAEFALVGIG 157 (267)
T ss_dssp C----CCCHHHHHHHHHHHHTCEEECCCSBSBCSSHHHHHHHHTSHHHHHHHHHH--------------HTCSEEEEEEE
T ss_pred CCCccccCHHHHHHHHHHHhCCeEEEEecCcccCCHHHHHHHHhChHHHHHHHHH--------------HhCCEEEEeCC
Confidence 44555666677777788877766566665544344431 124566665543 36899999999
Q ss_pred ccCcccccCC-----CCC--CC-ccCC---ceE--EeccC-CCCCC----CceEEeChHHHhccCceEEEEcCCCHHHHH
Q 048634 78 PDGHIASLFP-----GHP--LL-KENE---KWV--TFIKD-SPKPP----PERITFTFPVINSSAYIAMVVCGAGKSSAV 139 (175)
Q Consensus 78 ~DGH~AslfP-----~~~--~l-~~~~---~~v--~~~~~-~~~~p----~~riTlt~~~i~~ar~v~~lv~G~~K~~~l 139 (175)
..+--++++- ... .+ .+.. ..+ .++.. ...++ .+.|||++..|.++++++.++.|++|++++
T Consensus 158 ~~~~~s~l~~~g~~~~~~~~~L~~~~gaVGdi~g~rffD~~G~~v~~~~~~~~i~~~l~~l~~~~~~i~va~G~~K~~ai 237 (267)
T 3kv1_A 158 DMDENSHMVKLGFFTPKEFVEARLNDGIVGDIGGFDFFKLDGTDADTLMRGRVIGLEMEDLRQIPNVVAMASESRKALSI 237 (267)
T ss_dssp EHHHHTHHHHTTSSCHHHHHHHHHTTCEEEEETTTEEEETTSCBCCCGGGGGBCBCCHHHHHTSSEEEEECCCGGGHHHH
T ss_pred CCCCccHHHHhCCCCHHHHHHHHHhcCCEEEEcchHhhcCCCCEeccccccceeecCHHHHcCCCcEEEEecChHHHHHH
Confidence 9874222221 110 12 1111 000 01211 12222 368999999999999999999999999999
Q ss_pred HHHHcCCCCCccccccccccCCeEEEEechhhhcC
Q 048634 140 QTALGNNQNSDLLPVQMALAEEEFTWFLDKDATSK 174 (175)
Q Consensus 140 ~~~l~~~~~~~~~Pas~l~~~~~~~~~~D~~Aa~~ 174 (175)
+.+|.++- --++++|+.+|..
T Consensus 238 ~~al~~~~--------------~~~LITDe~tA~~ 258 (267)
T 3kv1_A 238 MGALRTGV--------------IDVLATSVSCAMA 258 (267)
T ss_dssp HHHHHTSC--------------CSEEEEEHHHHHH
T ss_pred HHHHhcCC--------------CCEEEeCHHHHHH
Confidence 99999753 1345788888764
No 25
>2ab1_A Hypothetical protein; HS.95870, DUF498, structural genomics, protein structure INI PSI, center for eukaryotic structural genomics, CESG; 2.59A {Homo sapiens} SCOP: c.103.1.1 PDB: 2q4q_A
Probab=42.75 E-value=18 Score=25.13 Aligned_cols=16 Identities=13% Similarity=0.339 Sum_probs=13.6
Q ss_pred CcccEEEEcccccCcc
Q 048634 67 PKFDLMLLGMGPDGHI 82 (175)
Q Consensus 67 ~~~Dl~lLGmG~DGH~ 82 (175)
+.+|++|+|.|..++.
T Consensus 60 ~~~evliiGtG~~~~~ 75 (122)
T 2ab1_A 60 KGVQTLVIGRGMSEAL 75 (122)
T ss_dssp TCCSEEEEEECSSCCS
T ss_pred CCCCEEEECCCCCCcc
Confidence 3589999999998875
No 26
>2a7y_A Hypothetical protein RV2302/MT2359; anti-parallel beta sheet, structural genomics, PSI, protein structure initiative; NMR {Mycobacterium tuberculosis} SCOP: b.34.6.3
Probab=41.10 E-value=12 Score=24.48 Aligned_cols=25 Identities=24% Similarity=0.526 Sum_probs=19.4
Q ss_pred CCCCcccEEEEcccccCcccccCCCCCC
Q 048634 64 TGFPKFDLMLLGMGPDGHIASLFPGHPL 91 (175)
Q Consensus 64 ~~~~~~Dl~lLGmG~DGH~AslfP~~~~ 91 (175)
.+.|++.+=+ -.|||.+..|||.+.
T Consensus 35 dG~PPY~VRw---~ddGHe~lv~PGPDa 59 (83)
T 2a7y_A 35 DGSPPYVVRW---LVNGHETTVYPGSDA 59 (83)
T ss_dssp SSCSCEEEEE---TTTTEEEEECCCSSC
T ss_pred CCCCCEEEEe---cCCCcEEEEecCCCe
Confidence 3456787766 489999999999764
No 27
>1ihn_A Hypothetical protein MTH938; methanobacterium thermoautotrophicum, unknown function; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.103.1.1
Probab=38.01 E-value=21 Score=24.47 Aligned_cols=18 Identities=22% Similarity=0.449 Sum_probs=15.2
Q ss_pred cccEEEEcccccCccccc
Q 048634 68 KFDLMLLGMGPDGHIASL 85 (175)
Q Consensus 68 ~~Dl~lLGmG~DGH~Asl 85 (175)
.+|++|+|.|..|+.-..
T Consensus 61 ~~evlliGTG~~~~~~~~ 78 (113)
T 1ihn_A 61 KPESIIIGSGVHGALETG 78 (113)
T ss_dssp CCSEEEEECCTTCCCEES
T ss_pred CCCEEEECCCCCccccCC
Confidence 489999999999877655
No 28
>2fvt_A Conserved hypothetical protein; MTH938-like fold, structural genomics, PSI, protein structure initiative; NMR {Rhodopseudomonas palustris} SCOP: c.103.1.1
Probab=36.48 E-value=18 Score=25.63 Aligned_cols=15 Identities=27% Similarity=0.534 Sum_probs=13.5
Q ss_pred CcccEEEEcccccCc
Q 048634 67 PKFDLMLLGMGPDGH 81 (175)
Q Consensus 67 ~~~Dl~lLGmG~DGH 81 (175)
|.+|++|+|.|..+.
T Consensus 66 p~pevliiGTG~~~~ 80 (135)
T 2fvt_A 66 NAIDTLIVGTGADVW 80 (135)
T ss_dssp TSCSEEEEECTTSCC
T ss_pred CCCCEEEEcCCCCCC
Confidence 568999999999887
No 29
>3cpk_A Uncharacterized protein Q7W7N7_borpa; BPP2477, BER31, NESG, structural genomics, PSI-2, protein structure initiative; 2.50A {Bordetella parapertussis 12822} PDB: 2k2e_A
Probab=21.53 E-value=44 Score=24.13 Aligned_cols=14 Identities=29% Similarity=0.603 Sum_probs=13.1
Q ss_pred cccEEEEcccccCc
Q 048634 68 KFDLMLLGMGPDGH 81 (175)
Q Consensus 68 ~~Dl~lLGmG~DGH 81 (175)
.+|++|+|.|..+|
T Consensus 88 ~pEvliiGTG~~~~ 101 (150)
T 3cpk_A 88 APEVLLVGTGRRQH 101 (150)
T ss_dssp CCSEEEEECTTSCC
T ss_pred CCCEEEEcCCCCCC
Confidence 68999999999998
Done!