BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048638
(147 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3FB3|A Chain A, Crystal Structure Of Trypanosoma Brucei Acetyltransferase,
Tb11.01.2886
pdb|3FB3|B Chain B, Crystal Structure Of Trypanosoma Brucei Acetyltransferase,
Tb11.01.2886
pdb|3I3G|A Chain A, Crystal Structure Of Trypanosoma Brucei
N-Acetyltransferase (Tb11.01.2886) At 1.86a
pdb|3I3G|B Chain B, Crystal Structure Of Trypanosoma Brucei
N-Acetyltransferase (Tb11.01.2886) At 1.86a
Length = 161
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 35/60 (58%)
Query: 75 VWDVVVDPSYQGMGLGKAVMERLIDELLEKGVCNIALYSEPRVLGFYRPLGFVADPGGIR 134
+ DVVVDPSY+G GLGKA++ L + KG + L S + L FY LGF A +R
Sbjct: 99 IEDVVVDPSYRGAGLGKALIMDLCEISRSKGCYKVILDSSEKSLPFYEKLGFRAHERQMR 158
>pdb|2CNM|A Chain A, Rimi - Ribosomal S18 N-Alpha-Protein Acetyltransferase In
Complex With A Bisubstrate Inhibitor (Cterm-Arg-Arg-Phe-
Tyr-Arg-Ala-N-Alpha-Acetyl-S-Coa).
pdb|2CNM|B Chain B, Rimi - Ribosomal S18 N-Alpha-Protein Acetyltransferase In
Complex With A Bisubstrate Inhibitor (Cterm-Arg-Arg-Phe-
Tyr-Arg-Ala-N-Alpha-Acetyl-S-Coa).
pdb|2CNM|C Chain C, Rimi - Ribosomal S18 N-Alpha-Protein Acetyltransferase In
Complex With A Bisubstrate Inhibitor (Cterm-Arg-Arg-Phe-
Tyr-Arg-Ala-N-Alpha-Acetyl-S-Coa).
pdb|2CNS|A Chain A, Rimi - Ribosomal S18 N-alpha-protein Acetyltransferase In
Complex With Acetylcoa.
pdb|2CNS|B Chain B, Rimi - Ribosomal S18 N-alpha-protein Acetyltransferase In
Complex With Acetylcoa.
pdb|2CNS|C Chain C, Rimi - Ribosomal S18 N-alpha-protein Acetyltransferase In
Complex With Acetylcoa.
pdb|2CNT|A Chain A, Rimi - Ribosomal S18 N-Alpha-Protein Acetyltransferase In
Complex With Coenzymea.
pdb|2CNT|B Chain B, Rimi - Ribosomal S18 N-Alpha-Protein Acetyltransferase In
Complex With Coenzymea.
pdb|2CNT|C Chain C, Rimi - Ribosomal S18 N-Alpha-Protein Acetyltransferase In
Complex With Coenzymea.
pdb|2CNT|D Chain D, Rimi - Ribosomal S18 N-Alpha-Protein Acetyltransferase In
Complex With Coenzymea
Length = 160
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 73 AIVWDVVVDPSYQGMGLGKAVMERLIDELLEKGVCNIAL---YSEPRVLGFYRPLGF 126
A ++++ VDP +Q GLG+ ++E LIDEL +GV + L S + Y LGF
Sbjct: 64 ATLFNIAVDPDFQRRGLGRMLLEHLIDELETRGVVTLWLEVRASNAAAIALYESLGF 120
>pdb|2ATR|A Chain A, Acetyltransferase, Gnat Family Protein Sp0256 From
Streptococcus Pneumoniae Tigr4
Length = 138
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 32/67 (47%)
Query: 60 VAFARATGDDVFNAIVWDVVVDPSYQGMGLGKAVMERLIDELLEKGVCNIALYSEPRVLG 119
V R GD + V D++V PSYQ G+G ++ + + E +A + +G
Sbjct: 54 VGLIRLVGDGFSSVFVQDLIVLPSYQRQGIGSSLXKEALGNFKEAYQVQLATEETEKNVG 113
Query: 120 FYRPLGF 126
FYR GF
Sbjct: 114 FYRSXGF 120
>pdb|1I21|A Chain A, Crystal Structure Of Yeast Gna1
pdb|1I21|B Chain B, Crystal Structure Of Yeast Gna1
pdb|1I21|M Chain M, Crystal Structure Of Yeast Gna1
pdb|1I21|N Chain N, Crystal Structure Of Yeast Gna1
pdb|1I21|X Chain X, Crystal Structure Of Yeast Gna1
pdb|1I21|Y Chain Y, Crystal Structure Of Yeast Gna1
Length = 159
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 77 DVVVDPSYQGMGLGKAVMERLIDELLEKGVCNIALYSEPRVLGFYRPLGF 126
D+ V+ YQG GLGK ++++L+ + G I L + + + FY GF
Sbjct: 99 DIAVNSKYQGQGLGKLLIDQLVTIGFDYGCYKIILDCDEKNVKFYEKCGF 148
>pdb|1I12|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae Gna1
Complexed With Accoa
pdb|1I12|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae Gna1
Complexed With Accoa
pdb|1I12|C Chain C, Crystal Structure Of Saccharomyces Cerevisiae Gna1
Complexed With Accoa
pdb|1I12|D Chain D, Crystal Structure Of Saccharomyces Cerevisiae Gna1
Complexed With Accoa
Length = 160
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 77 DVVVDPSYQGMGLGKAVMERLIDELLEKGVCNIALYSEPRVLGFYRPLGF 126
D+ V+ YQG GLGK ++++L+ + G I L + + + FY GF
Sbjct: 100 DIAVNSKYQGQGLGKLLIDQLVTIGFDYGCYKIILDCDEKNVKFYEKCGF 149
>pdb|1I1D|A Chain A, Crystal Structure Of Yeast Gna1 Bound To Coa And Glnac-6p
pdb|1I1D|B Chain B, Crystal Structure Of Yeast Gna1 Bound To Coa And Glnac-6p
pdb|1I1D|C Chain C, Crystal Structure Of Yeast Gna1 Bound To Coa And Glnac-6p
pdb|1I1D|D Chain D, Crystal Structure Of Yeast Gna1 Bound To Coa And Glnac-6p
Length = 161
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 77 DVVVDPSYQGMGLGKAVMERLIDELLEKGVCNIALYSEPRVLGFYRPLGF 126
D+ V+ YQG GLGK ++++L+ + G I L + + + FY GF
Sbjct: 101 DIAVNSKYQGQGLGKLLIDQLVTIGFDYGCYKIILDCDEKNVKFYEKCGF 150
>pdb|2FL4|A Chain A, The Crystal Structure Of The SpermineSPERMIDINE
ACETYLTRANSFERASE From Enterococcus Faecalis
Length = 149
Score = 35.8 bits (81), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 8/73 (10%)
Query: 79 VVDPSYQGMGLGKAVMERLIDELLEKGVCN---IALY-SEPRVLGFYRPLGFV----ADP 130
++D +QG G GKA L+ +L+EK N +++Y + + Y+ LGFV D
Sbjct: 77 LIDQRFQGQGYGKAACRLLMLKLIEKYQTNKLYLSVYDTNSSAIRLYQQLGFVFNGELDT 136
Query: 131 GGIRGMVYSRKSK 143
G R M ++ ++K
Sbjct: 137 NGERVMEWTHQNK 149
>pdb|1WK4|A Chain A, Crystal Structure Of Ttk003001606
pdb|1WK4|B Chain B, Crystal Structure Of Ttk003001606
pdb|1WK4|C Chain C, Crystal Structure Of Ttk003001606
pdb|2CY2|A Chain A, Crystal Structure Of Ttha1209 In Complex With Acetyl
Coenzyme A
Length = 174
Score = 33.9 bits (76), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 64 RATGDDVFNAIVWDVVVDPSYQGMGLGKAVMERLIDELLEKGVCNIALY---SEPRVLGF 120
RA+G + A +W + V P++Q GLG+A+ L +G ++ P+ GF
Sbjct: 80 RASGFPGYTAELWAIYVLPTWQRKGLGRALFHEGARLLQAEGYGRXLVWVLKENPKGRGF 139
Query: 121 YRPLGFV 127
Y LG V
Sbjct: 140 YEHLGGV 146
>pdb|4AG7|A Chain A, C. Elegans Glucosamine-6-Phosphate N-Acetyltransferase
(Gna1): Coenzyme A Adduct
pdb|4AG7|B Chain B, C. Elegans Glucosamine-6-Phosphate N-Acetyltransferase
(Gna1): Coenzyme A Adduct
pdb|4AG9|A Chain A, C. Elegans Glucosamine-6-Phosphate N-Acetyltransferase
(Gna1): Ternary Complex With Coenzyme A And Glcnac
pdb|4AG9|B Chain B, C. Elegans Glucosamine-6-Phosphate N-Acetyltransferase
(Gna1): Ternary Complex With Coenzyme A And Glcnac
Length = 165
Score = 33.5 bits (75), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 27/55 (49%)
Query: 75 VWDVVVDPSYQGMGLGKAVMERLIDELLEKGVCNIALYSEPRVLGFYRPLGFVAD 129
V DVVVD + LG +++ L+ GV I+L P +L FY GF D
Sbjct: 103 VEDVVVDTEMRRQKLGAVLLKTLVSLGKSLGVYKISLECVPELLPFYSQFGFQDD 157
>pdb|1TIQ|A Chain A, Crystal Structure Of An Acetyltransferase (Paia) In
Complex With Coa And Dtt From Bacillus Subtilis,
Northeast Structural Genomics Target Sr64.
pdb|1TIQ|B Chain B, Crystal Structure Of An Acetyltransferase (Paia) In
Complex With Coa And Dtt From Bacillus Subtilis,
Northeast Structural Genomics Target Sr64
Length = 180
Score = 33.1 bits (74), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Query: 78 VVVDPSYQGMGLGKAVMERLIDELLEKGVCNIAL---YSEPRVLGFYRPLGFV 127
+ + S+Q GLGK ++ + I+ LE+ NI L + FY+ GFV
Sbjct: 96 IYIKNSFQKHGLGKHLLNKAIEIALERNKKNIWLGVWEKNENAIAFYKKXGFV 148
>pdb|3DR8|A Chain A, Structure Of Ynca, A Putative Acetyltransferase From
Salmonella Typhimurium With Its Cofactor Acetyl-Coa
pdb|3DR8|B Chain B, Structure Of Ynca, A Putative Acetyltransferase From
Salmonella Typhimurium With Its Cofactor Acetyl-Coa
pdb|3DR6|A Chain A, Structure Of Ynca, A Putative Acetyltransferase From
Salmonella Typhimurium
pdb|3DR6|B Chain B, Structure Of Ynca, A Putative Acetyltransferase From
Salmonella Typhimurium
pdb|3DR6|C Chain C, Structure Of Ynca, A Putative Acetyltransferase From
Salmonella Typhimurium
Length = 174
Score = 33.1 bits (74), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 18/23 (78%)
Query: 78 VVVDPSYQGMGLGKAVMERLIDE 100
V V P++QG GLG+ ++ RLIDE
Sbjct: 88 VYVHPAHQGKGLGRKLLSRLIDE 110
>pdb|2KCW|A Chain A, Solution Structure Of Apo-Form Yjab From Escherichia Coli
Length = 147
Score = 32.7 bits (73), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 42/78 (53%), Gaps = 7/78 (8%)
Query: 49 LWIEYEKTRRPVAFARATGDDVFNAIVWDVVVDPSYQGMGLGKAVMERLIDELLEKGVCN 108
LW+ + +PV F +G + +A+ +DP +G G+G+ ++E + + + N
Sbjct: 52 LWVAVNERDQPVGFMLLSGQHM-DALF----IDPDVRGCGVGRVLVEHALS-MAPELTTN 105
Query: 109 IALYSEPRVLGFYRPLGF 126
+ +E + +GFY+ +GF
Sbjct: 106 VNEQNE-QAVGFYKKVGF 122
>pdb|3T90|A Chain A, Crystal Structure Of Glucosamine-6-Phosphate
N-Acetyltransferase From Arabidopsis Thaliana
Length = 149
Score = 32.3 bits (72), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 24/51 (47%)
Query: 75 VWDVVVDPSYQGMGLGKAVMERLIDELLEKGVCNIALYSEPRVLGFYRPLG 125
+ DVVVD ++G LGK V+E L+D G + L FY G
Sbjct: 86 IEDVVVDSRFRGKQLGKKVVEFLMDHCKSMGCYKVILDCSVENKVFYEKCG 136
>pdb|3QY2|A Chain A, Crystal Structure Of The P93a Monomer Mutant Of S.
Cerevisiae Cks1
pdb|3QY2|B Chain B, Crystal Structure Of The P93a Monomer Mutant Of S.
Cerevisiae Cks1
Length = 117
Score = 30.4 bits (67), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 12/80 (15%)
Query: 52 EYEKTRRPVAFARATGDDVFNAIV--WDVVVDPSYQGMGLGKAVMERLIDELLEKGVCNI 109
EY P A + D FN+ V ++ + ++G+G+ +++ E C+
Sbjct: 40 EYRHVMLPKAMLKVIPSDYFNSEVGTLRILTEDEWRGLGITQSLG-------WEHYECHA 92
Query: 110 ALYSEPRVLGFYRPLGFVAD 129
A EP +L F RPL + A+
Sbjct: 93 A---EPHILLFKRPLNYEAE 109
>pdb|3MGD|A Chain A, Crystal Structure Of Predicted Acetyltransferase With
Acetyl Clostridium Acetobutylicum At The Resolution
1.9a, Northeas Structural Genomics Consortium Target
Car165
pdb|3MGD|B Chain B, Crystal Structure Of Predicted Acetyltransferase With
Acetyl Clostridium Acetobutylicum At The Resolution
1.9a, Northeas Structural Genomics Consortium Target
Car165
Length = 157
Score = 30.4 bits (67), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 15/68 (22%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Query: 59 PVAFARATGDDVFNAIVWDVVVDPSYQGMGLGKAVMERLIDELLEKGVCNIALYSEPRVL 118
P + TG + + + +P+ +G G+ ++RL++E E+ + I L +
Sbjct: 74 PPTYTNKTGRKGY---ITNXYTEPTSRGNGIATGXLDRLVNEAKERNIHKICLVASKLGR 130
Query: 119 GFYRPLGF 126
Y+ GF
Sbjct: 131 PVYKKYGF 138
>pdb|3F8K|A Chain A, Crystal Structure Of Protein Acetyltransferase (Pat) From
Sulfolobus Solfataricus
Length = 160
Score = 30.4 bits (67), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 76 WDVVVDPSYQGMGLGKAVMERLIDELLEKGVCNIALYSEPR---VLGFYRPLGF 126
+ +VV +Y+ +G+G +++ LI+E + G+ + Y+ P + R LGF
Sbjct: 77 FSLVVHRNYRTLGIGTLLVKTLIEEAKKSGLSTVKFYTLPENTPXIKIGRKLGF 130
>pdb|1Z4E|A Chain A, Crystal Structure Of Transcriptional Regulator From
Bacillus Halodurans C-125
pdb|1Z4E|B Chain B, Crystal Structure Of Transcriptional Regulator From
Bacillus Halodurans C-125
Length = 153
Score = 30.0 bits (66), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 71 FNAIVWDVVVDPSYQGMGLGKAVMERLIDELLEKGVCNIALYSE---PRVLGFYRPLGFV 127
+ A + V + +G G+G ++ I+ E+G I L ++ P L FY LGF
Sbjct: 84 WRATIEGVRTHSAARGQGIGSQLVCWAIERAKERGCHLIQLTTDKQRPDALRFYEQLGFK 143
Query: 128 ADPGGIR 134
A G++
Sbjct: 144 ASHEGLK 150
>pdb|2BEI|A Chain A, X-Ray Structure Of Thialysine N-Acetyltransferase (Ssat2)
From Homo Sapiens
pdb|2BEI|B Chain B, X-Ray Structure Of Thialysine N-Acetyltransferase (Ssat2)
From Homo Sapiens
pdb|2Q4V|A Chain A, Ensemble Refinement Of The Protein Crystal Structure Of
Thialysine N- Acetyltransferase (Ssat2) From Homo
Sapiens
pdb|2Q4V|B Chain B, Ensemble Refinement Of The Protein Crystal Structure Of
Thialysine N- Acetyltransferase (Ssat2) From Homo
Sapiens
Length = 170
Score = 30.0 bits (66), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Query: 77 DVVVDPSYQGMGLGKAVMERLIDELLEKGVCNIALYS---EPRVLGFYRPLG 125
D+ V P Y+G G+G +++++ + L+KG L R Y+ LG
Sbjct: 93 DIYVXPEYRGQGIGSKIIKKVAEVALDKGCSQFRLAVLDWNQRAXDLYKALG 144
>pdb|2OZH|A Chain A, Crystal Structure Of A Putative Acetyltransferase
Belonging To The Gnat Family (Xcc2953) From Xanthomonas
Campestris Pv. Campestris At 1.40 A Resolution
Length = 142
Score = 30.0 bits (66), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Query: 58 RPVAFARATGDDVFNAIVWDVVVDPSYQGMGLGKAVMERLIDELLEKGVCNIALYSEPRV 117
R VAFAR D A + DV V P ++G G KA+ + + +G+ +L +
Sbjct: 55 RQVAFARVISDYATFAYLGDVFVLPEHRGRGYSKALXDAVXAHPDLQGLRRFSL-ATSDA 113
Query: 118 LGFYRPLGFV 127
G Y GF
Sbjct: 114 HGLYARYGFT 123
>pdb|4HNK|A Chain A, Crystal Structure Of An Enzyme
pdb|4HNK|B Chain B, Crystal Structure Of An Enzyme
pdb|4HNK|C Chain C, Crystal Structure Of An Enzyme
pdb|4HNK|D Chain D, Crystal Structure Of An Enzyme
pdb|4HNK|E Chain E, Crystal Structure Of An Enzyme
pdb|4HNK|F Chain F, Crystal Structure Of An Enzyme
pdb|4HNK|G Chain G, Crystal Structure Of An Enzyme
pdb|4HNK|H Chain H, Crystal Structure Of An Enzyme
pdb|4HNK|I Chain I, Crystal Structure Of An Enzyme
pdb|4HNK|J Chain J, Crystal Structure Of An Enzyme
pdb|4HNK|K Chain K, Crystal Structure Of An Enzyme
pdb|4HNK|L Chain L, Crystal Structure Of An Enzyme
pdb|4HNK|M Chain M, Crystal Structure Of An Enzyme
pdb|4HNK|N Chain N, Crystal Structure Of An Enzyme
Length = 219
Score = 29.3 bits (64), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 46 SSLLWIEYEKTRRPVA-FARATGDDVFNAIV 75
S LL++EYE R+P+ + +TGD N I+
Sbjct: 61 SQLLYLEYESKRKPIHLYINSTGDIDNNKII 91
>pdb|2Q0Y|A Chain A, Crystal Structure Of Gcn5-Related N-Acetyltransferase
(Yp_295895.1) From Ralstonia Eutropha Jmp134 At 1.80 A
Resolution
Length = 153
Score = 29.3 bits (64), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 23/37 (62%)
Query: 77 DVVVDPSYQGMGLGKAVMERLIDELLEKGVCNIALYS 113
++ VDPS++ G+G+A+ R E E+G+ L++
Sbjct: 92 NLYVDPSHRERGIGQALXNRAEAEFAERGIAFAVLHA 128
>pdb|4GM2|A Chain A, The Crystal Structure Of A Peptidase From Plasmodium
Falciparum
pdb|4GM2|B Chain B, The Crystal Structure Of A Peptidase From Plasmodium
Falciparum
pdb|4GM2|C Chain C, The Crystal Structure Of A Peptidase From Plasmodium
Falciparum
pdb|4GM2|D Chain D, The Crystal Structure Of A Peptidase From Plasmodium
Falciparum
pdb|4GM2|E Chain E, The Crystal Structure Of A Peptidase From Plasmodium
Falciparum
pdb|4GM2|F Chain F, The Crystal Structure Of A Peptidase From Plasmodium
Falciparum
pdb|4GM2|G Chain G, The Crystal Structure Of A Peptidase From Plasmodium
Falciparum
Length = 205
Score = 29.3 bits (64), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 46 SSLLWIEYEKTRRPVA-FARATGDDVFNAIV 75
S LL++EYE R+P+ + +TGD N I+
Sbjct: 47 SQLLYLEYESKRKPIHLYINSTGDIDNNKII 77
>pdb|1QB3|A Chain A, Crystal Structure Of The Cell Cycle Regulatory Protein
Cks1
pdb|1QB3|B Chain B, Crystal Structure Of The Cell Cycle Regulatory Protein
Cks1
pdb|1QB3|C Chain C, Crystal Structure Of The Cell Cycle Regulatory Protein
Cks1
Length = 150
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 12/80 (15%)
Query: 52 EYEKTRRPVAFARATGDDVFNAIV--WDVVVDPSYQGMGLGKAVMERLIDELLEKGVCNI 109
EY P A + D FN+ V ++ + ++G+G+ +++ E C+
Sbjct: 40 EYRHVMLPKAMLKVIPSDYFNSEVGTLRILTEDEWRGLGITQSLG-------WEHYECHA 92
Query: 110 ALYSEPRVLGFYRPLGFVAD 129
EP +L F RPL + A+
Sbjct: 93 P---EPHILLFKRPLNYEAE 109
>pdb|2GE3|A Chain A, Crystal Structure Of Probable Acetyltransferase From
Agrobacterium Tumefaciens
pdb|2GE3|B Chain B, Crystal Structure Of Probable Acetyltransferase From
Agrobacterium Tumefaciens
pdb|2GE3|C Chain C, Crystal Structure Of Probable Acetyltransferase From
Agrobacterium Tumefaciens
pdb|2GE3|D Chain D, Crystal Structure Of Probable Acetyltransferase From
Agrobacterium Tumefaciens
Length = 170
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Query: 82 PSYQGMGLGKAVMERLIDELLEKGVCNIAL---YSEPRVLGFYRPLGFV 127
P+Y+ GLG + R +D E G+ I L R + Y +GF
Sbjct: 95 PAYRNKGLGARLXRRTLDAAHEFGLHRIELSVHADNARAIALYEKIGFA 143
>pdb|2FE7|A Chain A, The Crystal Structure Of A Probable N-Acetyltransferase
From Pseudomonas Aeruginosa
pdb|2FE7|B Chain B, The Crystal Structure Of A Probable N-Acetyltransferase
From Pseudomonas Aeruginosa
Length = 166
Score = 27.3 bits (59), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 13/57 (22%)
Query: 77 DVVVDPSYQGMGLGKAVMERLIDELLEKGVCN--------IALYSEPRVLGFYRPLG 125
D+ V P Y+G+G G+ RL+ EL + V N + +++P + FYR +G
Sbjct: 93 DLYVTPEYRGVGAGR----RLLRELAREAVANDCGRLEWSVLDWNQP-AIDFYRSIG 144
>pdb|2GAN|A Chain A, Crystal Structure Of A Putative Acetyltransferase From
Pyrococcus Horikoshii, Northeast Structural Genomics
Target Jr32.
pdb|2GAN|B Chain B, Crystal Structure Of A Putative Acetyltransferase From
Pyrococcus Horikoshii, Northeast Structural Genomics
Target Jr32
Length = 190
Score = 26.9 bits (58), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 79 VVDPSYQGMGLGKAVMERLIDEL 101
VVDP +QG G+G ++E + L
Sbjct: 113 VVDPEFQGKGIGSTLLEFAVKRL 135
>pdb|2AZ4|A Chain A, Crystal Structure Of A Protein Of Unknown Function From
Enterococcus Faecalis V583
pdb|2AZ4|B Chain B, Crystal Structure Of A Protein Of Unknown Function From
Enterococcus Faecalis V583
Length = 429
Score = 26.6 bits (57), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Query: 26 VAVGFPRRDPDKIRVALENTSSLLW----IEYEKTRRPVAF 62
V++ FP R+PD ++A+ + L+ +E E R + F
Sbjct: 218 VSISFPEREPDPAQIAVVSEEDLVQHLVRLELENPNRQITF 258
>pdb|1GNX|A Chain A, B-Glucosidase From Streptomyces Sp
pdb|1GNX|B Chain B, B-Glucosidase From Streptomyces Sp
pdb|1GON|A Chain A, B-Glucosidase From Streptomyces Sp
pdb|1GON|B Chain B, B-Glucosidase From Streptomyces Sp
Length = 479
Score = 26.6 bits (57), Expect = 4.9, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 6/81 (7%)
Query: 33 RDPDKIRVALENTSSLLWIEYEKTRRPVAFARATGDDVFN-AIVWDVVVDPSYQGMGLGK 91
R P ++R +T + Y + R VA G + ++ W + P+ +G L K
Sbjct: 52 RTPGRVRNG--DTGDVATDHYHRWREDVALMAELGLGAYRFSLAWPRI-QPTGRGPALQK 108
Query: 92 AV--MERLIDELLEKGVCNIA 110
+ RL DELL KG+ +A
Sbjct: 109 GLDFYRRLADELLAKGIQPVA 129
>pdb|2OZG|A Chain A, Crystal Structure Of Gcn5-Related N-Acetyltransferase
(Yp_325469.1) From Anabaena Variabilis Atcc 29413 At
2.00 A Resolution
Length = 396
Score = 26.2 bits (56), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 67 GDDVFNAIVWDVVVDPSYQGMGLGKAVMERLIDELLEKGVCNIALYSEPRVLGFYRPLGF 126
G V A + V + P Y+G G A+++ + E+ E+ + LY P YR G+
Sbjct: 74 GQRVPXAGIAAVGIAPEYRGDGAAIALIQHTLQEISEQDIPISVLY--PATQRLYRKAGY 131
>pdb|2JAE|A Chain A, The Structure Of L-Amino Acid Oxidase From Rhodococcus
Opacus In The Unbound State
pdb|2JAE|B Chain B, The Structure Of L-Amino Acid Oxidase From Rhodococcus
Opacus In The Unbound State
pdb|2JB1|A Chain A, The L-Amino Acid Oxidase From Rhodococcus Opacus In
Complex With L-Alanine
pdb|2JB1|B Chain B, The L-Amino Acid Oxidase From Rhodococcus Opacus In
Complex With L-Alanine
pdb|2JB3|A Chain A, The Structure Of L-Amino Acid Oxidase From Rhodococcus
Opacus In Complex With O-Aminobenzoate
pdb|2JB3|B Chain B, The Structure Of L-Amino Acid Oxidase From Rhodococcus
Opacus In Complex With O-Aminobenzoate
pdb|2JB2|A Chain A, The Structure Of L-Amino Acid Oxidase From Rhodococcus
Opacus In Complex With L-Phenylalanine.
pdb|2JB2|B Chain B, The Structure Of L-Amino Acid Oxidase From Rhodococcus
Opacus In Complex With L-Phenylalanine
Length = 489
Score = 25.8 bits (55), Expect = 9.2, Method: Composition-based stats.
Identities = 12/25 (48%), Positives = 13/25 (52%)
Query: 52 EYEKTRRPVAFARATGDDVFNAIVW 76
EYEK PV GD + NAI W
Sbjct: 442 EYEKLLEPVDKIYFAGDHLSNAIAW 466
>pdb|4DOK|A Chain A, Crystal Structure Of Arabidopsis Thaliana
Chalcone-Isomerase Like Protein At5g05270 (Atchil)
pdb|4DOK|B Chain B, Crystal Structure Of Arabidopsis Thaliana
Chalcone-Isomerase Like Protein At5g05270 (Atchil)
Length = 208
Score = 25.8 bits (55), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 8 ILRRTISDLDINHLNSVFVAVGFPRRDPDKIRVALEN 44
+L + I+D++I+ L F A+G DP ++ L+N
Sbjct: 24 LLGQGITDIEIHFLQVKFTAIGV-YLDPSDVKTHLDN 59
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.142 0.421
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,450,736
Number of Sequences: 62578
Number of extensions: 172838
Number of successful extensions: 486
Number of sequences better than 100.0: 46
Number of HSP's better than 100.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 461
Number of HSP's gapped (non-prelim): 46
length of query: 147
length of database: 14,973,337
effective HSP length: 90
effective length of query: 57
effective length of database: 9,341,317
effective search space: 532455069
effective search space used: 532455069
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 47 (22.7 bits)