Query 048639
Match_columns 1139
No_of_seqs 731 out of 4173
Neff 8.5
Searched_HMMs 46136
Date Fri Mar 29 11:30:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048639.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/048639hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0055 Multidrug/pheromone ex 100.0 5E-203 1E-207 1827.9 118.1 1120 3-1136 88-1227(1228)
2 KOG0054 Multidrug resistance-a 100.0 6E-175 1E-179 1623.3 118.8 1076 21-1135 286-1376(1381)
3 PTZ00265 multidrug resistance 100.0 5E-164 1E-168 1604.1 138.4 1120 4-1134 115-1465(1466)
4 PLN03130 ABC transporter C fam 100.0 1E-158 2E-163 1568.1 136.7 1072 21-1135 385-1475(1622)
5 PLN03232 ABC transporter C fam 100.0 2E-157 4E-162 1559.0 134.1 1071 21-1136 385-1473(1495)
6 TIGR00957 MRP_assoc_pro multi 100.0 6E-153 1E-157 1518.6 135.9 1076 21-1134 402-1520(1522)
7 PTZ00243 ABC transporter; Prov 100.0 1E-146 3E-151 1452.0 134.1 1075 21-1135 329-1547(1560)
8 TIGR01271 CFTR_protein cystic 100.0 7E-145 2E-149 1436.0 133.9 1072 21-1136 166-1454(1490)
9 KOG0058 Peptide exporter, ABC 100.0 4E-108 8E-113 947.0 64.4 573 550-1137 134-707 (716)
10 KOG0058 Peptide exporter, ABC 100.0 1.1E-97 2E-102 860.1 55.9 491 5-497 207-707 (716)
11 KOG0055 Multidrug/pheromone ex 100.0 2.2E-95 5E-100 886.4 55.5 575 549-1136 13-590 (1228)
12 COG2274 SunT ABC-type bacterio 100.0 4.3E-92 9.3E-97 852.5 69.6 553 564-1135 157-709 (709)
13 COG1132 MdlB ABC-type multidru 100.0 6E-86 1.3E-90 810.4 72.6 552 565-1136 15-566 (567)
14 PRK11174 cysteine/glutathione 100.0 4.5E-85 9.7E-90 807.6 73.2 564 556-1137 14-587 (588)
15 TIGR00958 3a01208 Conjugate Tr 100.0 7.4E-85 1.6E-89 815.9 72.2 563 551-1131 149-711 (711)
16 COG2274 SunT ABC-type bacterio 100.0 1.5E-85 3.3E-90 795.5 60.8 485 7-494 215-708 (709)
17 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 8.6E-84 1.9E-88 807.9 74.4 551 563-1134 135-685 (686)
18 COG4988 CydD ABC-type transpor 100.0 6.3E-83 1.4E-87 725.7 68.4 548 573-1136 9-557 (559)
19 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 5.2E-83 1.1E-87 804.7 71.8 510 605-1131 195-709 (710)
20 TIGR01193 bacteriocin_ABC ABC- 100.0 7.9E-83 1.7E-87 802.0 72.0 556 559-1132 151-707 (708)
21 PRK11160 cysteine/glutathione 100.0 3.1E-81 6.6E-86 766.7 72.9 557 559-1133 11-573 (574)
22 PRK11176 lipid transporter ATP 100.0 4.5E-81 9.8E-86 771.6 73.5 513 607-1136 68-581 (582)
23 KOG0056 Heavy metal exporter H 100.0 3E-84 6.5E-89 702.0 39.3 506 617-1138 272-778 (790)
24 TIGR03375 type_I_sec_LssB type 100.0 4.1E-81 8.9E-86 784.7 72.6 545 562-1122 145-689 (694)
25 TIGR01846 type_I_sec_HlyB type 100.0 2.2E-80 4.7E-85 777.3 74.2 546 573-1135 148-693 (694)
26 PRK10790 putative multidrug tr 100.0 3.3E-80 7.1E-85 764.2 73.6 557 560-1137 19-578 (592)
27 KOG0057 Mitochondrial Fe/S clu 100.0 5.3E-81 1.2E-85 695.9 56.8 515 604-1137 74-589 (591)
28 TIGR02203 MsbA_lipidA lipid A 100.0 1.8E-79 4E-84 756.7 73.2 560 559-1135 9-569 (571)
29 COG4987 CydC ABC-type transpor 100.0 1E-79 2.2E-84 685.5 62.8 505 612-1133 66-572 (573)
30 PTZ00265 multidrug resistance 100.0 5.1E-79 1.1E-83 801.3 72.5 574 547-1135 43-729 (1466)
31 PRK11174 cysteine/glutathione 100.0 2.2E-79 4.8E-84 756.9 63.9 470 21-495 107-585 (588)
32 TIGR02204 MsbA_rel ABC transpo 100.0 4.1E-78 8.9E-83 744.9 73.9 562 560-1134 14-575 (576)
33 PRK13657 cyclic beta-1,2-gluca 100.0 4.9E-78 1.1E-82 743.5 74.2 558 559-1135 14-571 (588)
34 TIGR02868 CydC thiol reductant 100.0 5.5E-78 1.2E-82 735.0 68.4 516 561-1093 10-529 (529)
35 PRK10789 putative multidrug tr 100.0 1.1E-77 2.3E-82 735.5 71.0 515 605-1136 37-552 (569)
36 COG1132 MdlB ABC-type multidru 100.0 1.3E-78 2.9E-83 745.4 63.2 470 21-495 96-565 (567)
37 TIGR01192 chvA glucan exporter 100.0 3.7E-77 8E-82 731.4 74.1 559 558-1135 13-571 (585)
38 TIGR00958 3a01208 Conjugate Tr 100.0 8.8E-78 1.9E-82 752.1 62.8 479 8-490 223-710 (711)
39 COG4988 CydD ABC-type transpor 100.0 2.7E-77 5.8E-82 679.7 60.5 471 21-495 84-556 (559)
40 COG5265 ATM1 ABC-type transpor 100.0 6.4E-79 1.4E-83 657.0 40.7 492 625-1132 3-496 (497)
41 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 7E-77 1.5E-81 745.5 65.2 466 21-494 220-685 (686)
42 COG1123 ATPase components of v 100.0 2.1E-78 4.6E-83 693.2 46.8 482 256-1133 5-531 (539)
43 TIGR02857 CydD thiol reductant 100.0 8.3E-76 1.8E-80 715.9 69.1 523 567-1105 6-529 (529)
44 PRK11160 cysteine/glutathione 100.0 2.7E-76 5.8E-81 723.1 63.4 467 21-492 104-572 (574)
45 TIGR01193 bacteriocin_ABC ABC- 100.0 1.5E-76 3.3E-81 744.9 62.4 467 21-492 240-707 (708)
46 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 1.9E-76 4.2E-81 745.1 62.8 466 21-491 238-709 (710)
47 TIGR03375 type_I_sec_LssB type 100.0 1.2E-75 2.6E-80 735.3 63.4 459 21-483 231-689 (694)
48 PRK11176 lipid transporter ATP 100.0 1.9E-75 4.1E-80 721.5 63.9 470 21-494 109-579 (582)
49 TIGR01842 type_I_sec_PrtD type 100.0 2.4E-74 5.2E-79 703.5 70.3 531 569-1121 11-542 (544)
50 KOG0057 Mitochondrial Fe/S clu 100.0 1.2E-75 2.7E-80 652.9 52.4 483 7-495 95-587 (591)
51 KOG0056 Heavy metal exporter H 100.0 3.2E-77 6.9E-82 647.3 35.5 472 21-496 303-776 (790)
52 TIGR01846 type_I_sec_HlyB type 100.0 3.5E-74 7.6E-79 721.2 64.4 470 21-494 223-692 (694)
53 PRK10790 putative multidrug tr 100.0 5.5E-74 1.2E-78 708.8 63.2 467 21-495 109-576 (592)
54 PRK10789 putative multidrug tr 100.0 1.2E-73 2.5E-78 699.9 64.1 471 21-495 80-551 (569)
55 TIGR02203 MsbA_lipidA lipid A 100.0 1.1E-73 2.3E-78 705.4 63.7 470 21-494 98-568 (571)
56 PRK13657 cyclic beta-1,2-gluca 100.0 1.8E-73 3.8E-78 703.0 64.5 472 21-495 100-571 (588)
57 TIGR01192 chvA glucan exporter 100.0 3.5E-73 7.5E-78 696.3 66.3 472 21-495 100-571 (585)
58 PRK10261 glutathione transport 100.0 9.2E-75 2E-79 712.7 50.4 499 255-1129 11-561 (623)
59 PRK13549 xylose transporter AT 100.0 3E-75 6.5E-80 704.6 44.0 460 256-1120 5-493 (506)
60 TIGR02868 CydC thiol reductant 100.0 2.2E-73 4.8E-78 694.6 58.9 430 21-454 97-529 (529)
61 COG4987 CydC ABC-type transpor 100.0 3.3E-73 7.1E-78 633.5 54.1 457 32-492 112-571 (573)
62 TIGR02204 MsbA_rel ABC transpo 100.0 1.9E-72 4.2E-77 694.5 64.2 473 21-494 102-575 (576)
63 PRK15134 microcin C ABC transp 100.0 5.4E-74 1.2E-78 697.5 48.5 471 256-1127 5-521 (529)
64 PRK09700 D-allose transporter 100.0 9.9E-74 2.2E-78 692.7 46.8 457 256-1118 5-495 (510)
65 PRK10762 D-ribose transporter 100.0 1.8E-73 3.9E-78 688.3 44.9 452 256-1120 4-483 (501)
66 TIGR00957 MRP_assoc_pro multi 100.0 7.9E-72 1.7E-76 742.5 63.9 480 8-493 1027-1519(1522)
67 TIGR03269 met_CoM_red_A2 methy 100.0 2.5E-73 5.4E-78 690.8 43.2 459 257-1121 1-517 (520)
68 COG4172 ABC-type uncharacteriz 100.0 5.2E-73 1.1E-77 605.9 39.9 474 256-1130 6-525 (534)
69 PRK11288 araG L-arabinose tran 100.0 3.5E-73 7.6E-78 685.7 43.8 454 256-1120 4-484 (501)
70 TIGR02633 xylG D-xylose ABC tr 100.0 6.6E-73 1.4E-77 684.5 45.5 458 257-1119 2-490 (500)
71 TIGR02857 CydD thiol reductant 100.0 4.6E-71 1E-75 674.2 60.2 442 21-466 88-529 (529)
72 TIGR01257 rim_protein retinal- 100.0 7.4E-71 1.6E-75 717.9 64.3 220 255-483 927-1150(2272)
73 PRK15439 autoinducer 2 ABC tra 100.0 2.6E-72 5.7E-77 678.2 46.8 464 256-1122 11-493 (510)
74 TIGR01194 cyc_pep_trnsptr cycl 100.0 5.8E-70 1.3E-74 664.5 64.5 525 561-1113 15-551 (555)
75 COG5265 ATM1 ABC-type transpor 100.0 4.1E-72 8.9E-77 604.3 40.1 469 21-492 26-496 (497)
76 PLN03130 ABC transporter C fam 100.0 2.4E-70 5.2E-75 726.2 63.3 477 8-495 975-1475(1622)
77 PRK10982 galactose/methyl gala 100.0 1E-71 2.3E-76 671.9 44.5 452 259-1120 1-479 (491)
78 PTZ00243 ABC transporter; Prov 100.0 6E-70 1.3E-74 721.8 64.2 471 21-494 1042-1546(1560)
79 TIGR01842 type_I_sec_PrtD type 100.0 1.7E-69 3.6E-74 660.9 62.9 444 34-482 97-542 (544)
80 PLN03232 ABC transporter C fam 100.0 1.2E-69 2.6E-74 720.8 62.1 482 7-495 971-1472(1495)
81 TIGR00956 3a01205 Pleiotropic 100.0 5.1E-70 1.1E-74 716.4 57.7 214 885-1118 759-990 (1394)
82 PRK10938 putative molybdenum t 100.0 5.8E-71 1.3E-75 665.8 44.9 454 256-1114 3-485 (490)
83 COG4618 ArpD ABC-type protease 100.0 9.2E-69 2E-73 591.4 51.7 527 576-1122 35-561 (580)
84 PRK15064 ABC transporter ATP-b 100.0 4.2E-69 9.1E-74 654.7 52.6 480 257-1122 2-526 (530)
85 PRK11819 putative ABC transpor 100.0 1E-67 2.2E-72 644.1 53.6 484 256-1122 6-534 (556)
86 TIGR01271 CFTR_protein cystic 100.0 6.7E-67 1.5E-71 693.0 64.4 467 21-496 969-1454(1490)
87 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 5.2E-67 1.1E-71 638.1 53.9 483 256-1122 4-532 (552)
88 KOG0054 Multidrug resistance-a 100.0 5.8E-67 1.2E-71 654.2 52.9 465 21-491 902-1372(1381)
89 PRK10522 multidrug transporter 100.0 4.1E-65 8.9E-70 622.1 64.1 474 617-1120 61-538 (547)
90 TIGR01194 cyc_pep_trnsptr cycl 100.0 9.3E-66 2E-70 627.5 56.1 456 6-474 73-551 (555)
91 PRK10636 putative ABC transpor 100.0 9.4E-66 2E-70 632.7 51.4 480 257-1120 2-516 (638)
92 PLN03140 ABC transporter G fam 100.0 8.5E-65 1.8E-69 663.0 62.8 214 885-1117 867-1106(1470)
93 COG4618 ArpD ABC-type protease 100.0 7.8E-66 1.7E-70 568.2 42.2 443 34-482 116-560 (580)
94 PRK11147 ABC transporter ATPas 100.0 4E-64 8.8E-69 620.5 52.6 201 885-1121 319-528 (635)
95 PLN03073 ABC transporter F fam 100.0 2.6E-64 5.6E-69 619.8 47.1 199 885-1120 508-713 (718)
96 COG1129 MglA ABC-type sugar tr 100.0 4E-64 8.6E-69 572.3 40.7 462 256-1117 8-486 (500)
97 PRK13409 putative ATPase RIL; 100.0 1.3E-63 2.8E-68 603.9 37.3 438 261-1115 78-536 (590)
98 PRK10522 multidrug transporter 100.0 2.5E-61 5.4E-66 588.8 56.8 435 21-478 92-535 (547)
99 COG0488 Uup ATPase components 100.0 3.7E-62 7.9E-67 573.7 46.7 485 256-1122 3-526 (530)
100 TIGR00954 3a01203 Peroxysomal 100.0 3E-60 6.6E-65 586.0 60.1 513 565-1107 97-653 (659)
101 COG3845 ABC-type uncharacteriz 100.0 4.5E-61 9.8E-66 533.4 40.0 463 256-1118 4-489 (501)
102 TIGR00954 3a01203 Peroxysomal 100.0 1.7E-57 3.6E-62 561.6 54.6 427 23-468 185-653 (659)
103 cd03289 ABCC_CFTR2 The CFTR su 100.0 1.2E-53 2.6E-58 470.3 26.9 237 884-1134 1-237 (275)
104 COG1126 GlnQ ABC-type polar am 100.0 9.1E-53 2E-57 419.7 19.7 218 256-483 2-226 (240)
105 COG1126 GlnQ ABC-type polar am 100.0 1.3E-50 2.7E-55 404.4 22.6 219 885-1126 2-230 (240)
106 KOG0927 Predicted transporter 100.0 4.7E-49 1E-53 437.8 30.2 198 885-1117 389-592 (614)
107 COG1135 AbcC ABC-type metal io 100.0 8.1E-50 1.8E-54 418.9 19.8 222 886-1126 2-236 (339)
108 COG1125 OpuBA ABC-type proline 100.0 1.1E-49 2.5E-54 404.5 17.8 225 257-491 2-236 (309)
109 PRK14257 phosphate ABC transpo 100.0 8.5E-49 1.8E-53 443.1 25.4 227 881-1125 76-317 (329)
110 COG1135 AbcC ABC-type metal io 100.0 3E-49 6.5E-54 414.6 20.0 221 257-484 2-233 (339)
111 cd03289 ABCC_CFTR2 The CFTR su 100.0 2.1E-48 4.5E-53 428.7 27.2 236 256-494 2-237 (275)
112 COG1117 PstB ABC-type phosphat 100.0 4.5E-49 9.9E-54 390.5 18.0 219 255-483 6-238 (253)
113 COG1117 PstB ABC-type phosphat 100.0 4.8E-48 1E-52 383.3 17.4 221 884-1124 6-240 (253)
114 COG1125 OpuBA ABC-type proline 100.0 1.5E-47 3.3E-52 388.9 18.7 222 886-1129 2-233 (309)
115 PRK14257 phosphate ABC transpo 100.0 1.2E-46 2.6E-51 425.6 25.9 227 254-483 78-314 (329)
116 cd03288 ABCC_SUR2 The SUR doma 100.0 5.2E-46 1.1E-50 409.8 27.9 241 882-1134 16-256 (257)
117 KOG0065 Pleiotropic drug resis 100.0 4.8E-45 1.1E-49 444.6 37.2 199 901-1118 804-1018(1391)
118 cd03252 ABCC_Hemolysin The ABC 100.0 7.4E-46 1.6E-50 404.7 27.0 235 886-1132 1-235 (237)
119 cd03252 ABCC_Hemolysin The ABC 100.0 1E-45 2.2E-50 403.6 27.2 234 257-491 1-234 (237)
120 COG1120 FepC ABC-type cobalami 100.0 1.6E-46 3.5E-51 397.4 20.1 222 256-492 2-237 (258)
121 COG1127 Ttg2A ABC-type transpo 100.0 3.3E-46 7.2E-51 378.6 21.2 228 255-492 7-246 (263)
122 COG3638 ABC-type phosphate/pho 100.0 1.6E-46 3.4E-51 380.0 18.0 231 256-492 3-245 (258)
123 KOG0062 ATPase component of AB 100.0 3.4E-45 7.4E-50 404.9 28.6 195 884-1112 361-559 (582)
124 COG1116 TauB ABC-type nitrate/ 100.0 8.4E-46 1.8E-50 383.0 21.1 202 256-472 3-212 (248)
125 COG1136 SalX ABC-type antimicr 100.0 2.4E-45 5.1E-50 380.9 22.2 209 257-472 2-221 (226)
126 COG2884 FtsE Predicted ATPase 100.0 8.1E-46 1.8E-50 360.8 17.5 207 257-476 2-220 (223)
127 COG3839 MalK ABC-type sugar tr 100.0 1.6E-45 3.5E-50 404.8 21.8 213 256-484 3-225 (338)
128 COG1124 DppF ABC-type dipeptid 100.0 4.1E-45 9E-50 373.3 21.4 228 885-1131 3-241 (252)
129 cd03253 ABCC_ATM1_transporter 100.0 1.3E-44 2.8E-49 394.9 26.5 235 886-1133 1-235 (236)
130 COG3842 PotA ABC-type spermidi 100.0 1.2E-45 2.5E-50 408.1 18.4 214 255-484 4-228 (352)
131 COG3840 ThiQ ABC-type thiamine 100.0 3.2E-45 6.9E-50 353.1 18.8 209 257-483 2-220 (231)
132 TIGR02314 ABC_MetN D-methionin 100.0 6E-45 1.3E-49 411.8 23.5 223 886-1127 2-236 (343)
133 cd03251 ABCC_MsbA MsbA is an e 100.0 1.6E-44 3.5E-49 393.6 25.9 230 257-487 1-230 (234)
134 cd03244 ABCC_MRP_domain2 Domai 100.0 1.8E-44 4E-49 389.5 25.9 221 884-1116 1-221 (221)
135 cd03251 ABCC_MsbA MsbA is an e 100.0 2.1E-44 4.5E-49 392.7 26.2 233 886-1130 1-233 (234)
136 cd03253 ABCC_ATM1_transporter 100.0 2.7E-44 5.9E-49 392.3 26.9 233 257-491 1-233 (236)
137 cd03254 ABCC_Glucan_exporter_l 100.0 2.6E-44 5.7E-49 390.5 26.2 225 256-482 2-226 (229)
138 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 3.3E-44 7.2E-49 392.0 26.8 233 257-489 1-233 (238)
139 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 3.1E-44 6.8E-49 392.2 26.4 235 886-1131 1-235 (238)
140 COG1120 FepC ABC-type cobalami 100.0 8.7E-45 1.9E-49 384.2 21.0 216 885-1122 2-229 (258)
141 cd03288 ABCC_SUR2 The SUR doma 100.0 6E-44 1.3E-48 393.5 28.6 239 252-492 15-254 (257)
142 COG2884 FtsE Predicted ATPase 100.0 6.6E-45 1.4E-49 354.5 17.4 209 886-1116 2-221 (223)
143 cd03254 ABCC_Glucan_exporter_l 100.0 4.5E-44 9.8E-49 388.7 25.9 227 884-1122 1-227 (229)
144 COG1122 CbiO ABC-type cobalt t 100.0 2.1E-44 4.6E-49 382.7 22.6 219 256-483 3-229 (235)
145 COG1124 DppF ABC-type dipeptid 100.0 1.5E-44 3.2E-49 369.2 20.6 218 256-483 3-232 (252)
146 COG3839 MalK ABC-type sugar tr 100.0 1.9E-44 4.1E-49 396.4 22.1 220 885-1128 3-230 (338)
147 COG1122 CbiO ABC-type cobalt t 100.0 2.1E-44 4.6E-49 382.7 21.5 217 885-1122 3-229 (235)
148 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 4.2E-44 9.1E-49 376.6 22.3 210 256-483 4-228 (254)
149 cd03244 ABCC_MRP_domain2 Domai 100.0 1.2E-43 2.7E-48 383.1 26.4 219 256-476 2-220 (221)
150 TIGR02314 ABC_MetN D-methionin 100.0 4.1E-44 8.8E-49 405.1 23.4 228 257-491 2-241 (343)
151 cd03245 ABCC_bacteriocin_expor 100.0 1.2E-43 2.6E-48 382.8 25.7 220 884-1114 1-220 (220)
152 COG1127 Ttg2A ABC-type transpo 100.0 9.2E-44 2E-48 360.9 21.9 226 885-1132 8-246 (263)
153 COG3638 ABC-type phosphate/pho 100.0 4.2E-44 9E-49 362.4 19.2 224 885-1132 3-245 (258)
154 PRK13631 cbiO cobalt transport 100.0 2.6E-43 5.6E-48 397.4 27.6 223 255-484 20-267 (320)
155 COG1118 CysA ABC-type sulfate/ 100.0 2.1E-44 4.7E-49 376.8 17.0 217 256-484 2-229 (345)
156 COG3840 ThiQ ABC-type thiamine 100.0 6.9E-44 1.5E-48 343.9 19.1 212 886-1123 2-221 (231)
157 PRK13631 cbiO cobalt transport 100.0 2.2E-43 4.8E-48 397.9 26.2 219 885-1122 21-266 (320)
158 cd03245 ABCC_bacteriocin_expor 100.0 3.3E-43 7.1E-48 379.5 26.3 219 256-475 2-220 (220)
159 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 1.3E-43 2.8E-48 372.9 21.9 218 885-1131 4-235 (254)
160 cd03260 ABC_PstB_phosphate_tra 100.0 1.3E-43 2.8E-48 384.4 21.8 212 886-1119 1-227 (227)
161 cd03261 ABC_Org_Solvent_Resist 100.0 1.8E-43 3.9E-48 385.2 22.7 219 886-1127 1-231 (235)
162 COG1136 SalX ABC-type antimicr 100.0 3.1E-43 6.7E-48 365.1 22.9 208 886-1112 2-222 (226)
163 COG4178 ABC-type uncharacteriz 100.0 9E-40 1.9E-44 379.9 53.6 473 606-1106 88-587 (604)
164 cd03261 ABC_Org_Solvent_Resist 100.0 4.1E-43 8.9E-48 382.4 24.1 217 257-483 1-227 (235)
165 cd03248 ABCC_TAP TAP, the Tran 100.0 5E-43 1.1E-47 379.6 24.5 219 253-471 8-226 (226)
166 PRK13650 cbiO cobalt transport 100.0 4.3E-43 9.3E-48 390.6 24.0 219 885-1122 4-230 (279)
167 cd03248 ABCC_TAP TAP, the Tran 100.0 6E-43 1.3E-47 379.0 24.3 219 882-1110 8-226 (226)
168 COG1116 TauB ABC-type nitrate/ 100.0 3.3E-43 7.2E-48 363.7 21.1 199 885-1110 3-211 (248)
169 PRK14250 phosphate ABC transpo 100.0 9.9E-43 2.1E-47 380.3 24.8 225 885-1131 3-231 (241)
170 PRK11650 ugpC glycerol-3-phosp 100.0 5.8E-43 1.3E-47 399.3 23.8 221 885-1128 3-231 (356)
171 PRK11432 fbpC ferric transport 100.0 5E-43 1.1E-47 398.6 23.0 220 885-1128 6-233 (351)
172 PRK11153 metN DL-methionine tr 100.0 7.2E-43 1.6E-47 398.5 23.8 224 886-1128 2-237 (343)
173 COG4615 PvdE ABC-type sideroph 100.0 4.6E-40 1E-44 351.4 43.1 474 606-1113 50-529 (546)
174 PRK14269 phosphate ABC transpo 100.0 1.4E-42 3.1E-47 380.4 24.7 223 885-1127 2-236 (246)
175 COG3842 PotA ABC-type spermidi 100.0 2.8E-43 6E-48 389.2 18.5 221 884-1128 4-233 (352)
176 PRK11650 ugpC glycerol-3-phosp 100.0 1.1E-42 2.3E-47 397.2 23.8 217 256-483 3-225 (356)
177 PRK13637 cbiO cobalt transport 100.0 1.1E-42 2.4E-47 388.6 23.3 217 886-1121 3-234 (287)
178 TIGR03265 PhnT2 putative 2-ami 100.0 9.2E-43 2E-47 397.2 22.8 220 885-1128 4-231 (353)
179 PRK13647 cbiO cobalt transport 100.0 1.4E-42 3E-47 385.5 23.3 214 885-1120 4-226 (274)
180 cd03260 ABC_PstB_phosphate_tra 100.0 1.1E-42 2.4E-47 377.1 21.9 214 257-480 1-227 (227)
181 PRK11432 fbpC ferric transport 100.0 2.1E-42 4.5E-47 393.5 25.1 216 256-483 6-227 (351)
182 PRK13650 cbiO cobalt transport 100.0 2.2E-42 4.8E-47 384.9 24.4 222 256-484 4-231 (279)
183 cd03219 ABC_Mj1267_LivG_branch 100.0 1.6E-42 3.5E-47 378.3 22.2 221 257-482 1-232 (236)
184 PRK13646 cbiO cobalt transport 100.0 1.8E-42 3.9E-47 387.1 22.8 218 886-1122 3-236 (286)
185 PRK13637 cbiO cobalt transport 100.0 5.3E-42 1.1E-46 383.1 26.5 220 257-483 3-235 (287)
186 TIGR03265 PhnT2 putative 2-ami 100.0 1.8E-42 3.8E-47 394.9 22.9 217 256-484 4-226 (353)
187 TIGR01186 proV glycine betaine 100.0 1.5E-42 3.2E-47 394.2 22.1 209 901-1128 6-226 (363)
188 PRK09536 btuD corrinoid ABC tr 100.0 2.5E-42 5.5E-47 396.9 24.1 222 885-1131 3-236 (402)
189 PRK13643 cbiO cobalt transport 100.0 2.1E-42 4.5E-47 386.5 22.7 217 886-1122 2-234 (288)
190 TIGR00960 3a0501s02 Type II (G 100.0 1.3E-42 2.8E-47 373.6 20.2 204 886-1110 2-216 (216)
191 PRK10851 sulfate/thiosulfate t 100.0 2.6E-42 5.7E-47 393.5 23.6 219 885-1127 2-232 (353)
192 PRK11153 metN DL-methionine tr 100.0 3.4E-42 7.4E-47 393.0 24.5 220 257-483 2-231 (343)
193 cd03296 ABC_CysA_sulfate_impor 100.0 2.5E-42 5.5E-47 377.0 22.4 215 886-1124 3-229 (239)
194 TIGR01186 proV glycine betaine 100.0 1.4E-42 3E-47 394.4 21.0 205 272-483 6-220 (363)
195 PRK13635 cbiO cobalt transport 100.0 3.3E-42 7.2E-47 383.1 23.5 218 885-1122 5-230 (279)
196 cd03369 ABCC_NFT1 Domain 2 of 100.0 6.4E-42 1.4E-46 365.5 24.8 204 883-1116 4-207 (207)
197 PRK13643 cbiO cobalt transport 100.0 4.8E-42 1E-46 383.6 24.5 220 257-483 2-234 (288)
198 COG4615 PvdE ABC-type sideroph 100.0 4.6E-40 1E-44 351.4 38.3 433 21-474 92-529 (546)
199 cd03256 ABC_PhnC_transporter A 100.0 3.2E-42 6.9E-47 377.4 22.5 214 886-1120 1-233 (241)
200 TIGR00972 3a0107s01c2 phosphat 100.0 6E-42 1.3E-46 376.0 24.6 223 886-1128 2-239 (247)
201 TIGR03258 PhnT 2-aminoethylpho 100.0 2.9E-42 6.2E-47 393.5 22.8 222 883-1127 3-234 (362)
202 cd03219 ABC_Mj1267_LivG_branch 100.0 2.9E-42 6.3E-47 376.3 21.8 214 886-1122 1-233 (236)
203 PRK14273 phosphate ABC transpo 100.0 4.9E-42 1.1E-46 378.3 23.7 224 885-1128 7-245 (254)
204 PRK13646 cbiO cobalt transport 100.0 6.1E-42 1.3E-46 382.8 24.6 221 257-484 3-237 (286)
205 cd03294 ABC_Pro_Gly_Bertaine T 100.0 3.1E-42 6.8E-47 381.9 22.0 221 887-1129 26-258 (269)
206 PRK13634 cbiO cobalt transport 100.0 9.3E-42 2E-46 381.7 25.8 221 257-484 3-237 (290)
207 PRK13642 cbiO cobalt transport 100.0 5.9E-42 1.3E-46 381.4 24.0 219 885-1122 4-230 (277)
208 PRK09452 potA putrescine/sperm 100.0 5.4E-42 1.2E-46 392.5 24.2 219 885-1127 14-240 (375)
209 cd03258 ABC_MetN_methionine_tr 100.0 4.9E-42 1.1E-46 373.7 22.4 218 886-1122 2-231 (233)
210 PRK14242 phosphate transporter 100.0 7.4E-42 1.6E-46 376.9 24.1 220 885-1124 6-240 (253)
211 PRK14269 phosphate ABC transpo 100.0 5.1E-42 1.1E-46 376.1 22.7 219 256-482 2-230 (246)
212 PRK09452 potA putrescine/sperm 100.0 6.5E-42 1.4E-46 391.8 24.2 217 255-483 13-235 (375)
213 PRK15079 oligopeptide ABC tran 100.0 6.6E-42 1.4E-46 387.3 24.0 226 885-1129 8-259 (331)
214 cd03291 ABCC_CFTR1 The CFTR su 100.0 3.1E-41 6.7E-46 373.1 28.7 220 882-1131 36-256 (282)
215 cd03250 ABCC_MRP_domain1 Domai 100.0 8.4E-42 1.8E-46 363.7 23.3 201 886-1109 1-204 (204)
216 PRK13634 cbiO cobalt transport 100.0 4.7E-42 1E-46 384.1 22.4 219 886-1122 3-236 (290)
217 cd03295 ABC_OpuCA_Osmoprotecti 100.0 6E-42 1.3E-46 374.8 22.7 218 886-1124 1-228 (242)
218 PRK13651 cobalt transporter AT 100.0 7.3E-42 1.6E-46 383.4 23.8 217 886-1122 3-255 (305)
219 PRK10851 sulfate/thiosulfate t 100.0 6.4E-42 1.4E-46 390.4 23.7 216 256-483 2-227 (353)
220 PRK10744 pstB phosphate transp 100.0 1.2E-41 2.6E-46 376.1 25.2 222 883-1124 11-247 (260)
221 TIGR02315 ABC_phnC phosphonate 100.0 6E-42 1.3E-46 375.6 22.6 214 886-1120 2-234 (243)
222 PRK14250 phosphate ABC transpo 100.0 1.2E-41 2.6E-46 371.7 24.7 216 256-483 3-222 (241)
223 cd03259 ABC_Carb_Solutes_like 100.0 3E-42 6.4E-47 369.9 19.4 205 886-1114 1-213 (213)
224 TIGR03258 PhnT 2-aminoethylpho 100.0 5.9E-42 1.3E-46 390.9 23.0 217 255-483 4-229 (362)
225 cd03263 ABC_subfamily_A The AB 100.0 5.9E-42 1.3E-46 369.7 21.8 211 886-1119 1-219 (220)
226 PRK11000 maltose/maltodextrin 100.0 6.2E-42 1.4E-46 393.8 23.2 219 885-1127 3-229 (369)
227 cd03224 ABC_TM1139_LivF_branch 100.0 6.2E-42 1.3E-46 370.2 21.8 214 886-1121 1-221 (222)
228 PRK13647 cbiO cobalt transport 100.0 1E-41 2.2E-46 378.5 23.9 216 256-480 4-225 (274)
229 TIGR00960 3a0501s02 Type II (G 100.0 4E-42 8.6E-47 369.8 19.9 207 257-471 2-216 (216)
230 cd03256 ABC_PhnC_transporter A 100.0 7.8E-42 1.7E-46 374.4 22.5 221 257-481 1-233 (241)
231 cd03224 ABC_TM1139_LivF_branch 100.0 7.2E-42 1.6E-46 369.7 21.8 216 257-481 1-220 (222)
232 PRK13636 cbiO cobalt transport 100.0 9.2E-42 2E-46 380.7 23.3 217 885-1122 5-232 (283)
233 PRK13632 cbiO cobalt transport 100.0 1.1E-41 2.3E-46 378.4 23.6 218 885-1122 7-232 (271)
234 PRK13651 cobalt transporter AT 100.0 1.7E-41 3.7E-46 380.4 25.5 220 257-483 3-255 (305)
235 cd03369 ABCC_NFT1 Domain 2 of 100.0 2.2E-41 4.8E-46 361.3 25.1 203 255-477 5-207 (207)
236 cd03296 ABC_CysA_sulfate_impor 100.0 7.1E-42 1.5E-46 373.5 21.8 215 256-482 2-226 (239)
237 PRK13635 cbiO cobalt transport 100.0 1.5E-41 3.2E-46 377.9 24.4 224 256-487 5-234 (279)
238 PRK09536 btuD corrinoid ABC tr 100.0 1.1E-41 2.5E-46 391.5 24.2 230 256-492 3-237 (402)
239 PRK14235 phosphate transporter 100.0 1.5E-41 3.4E-46 376.2 24.3 224 882-1125 16-255 (267)
240 TIGR00972 3a0107s01c2 phosphat 100.0 1.6E-41 3.5E-46 372.5 24.2 216 257-482 2-232 (247)
241 cd03259 ABC_Carb_Solutes_like 100.0 5.7E-42 1.2E-46 367.7 20.2 207 257-475 1-213 (213)
242 cd03266 ABC_NatA_sodium_export 100.0 9.8E-42 2.1E-46 367.4 22.0 208 886-1114 2-218 (218)
243 TIGR03005 ectoine_ehuA ectoine 100.0 1.3E-41 2.7E-46 374.6 23.3 220 886-1127 1-242 (252)
244 cd03265 ABC_DrrA DrrA is the A 100.0 9.4E-42 2E-46 367.8 21.8 211 886-1119 1-219 (220)
245 PRK13537 nodulation ABC transp 100.0 9.4E-42 2E-46 383.5 22.7 215 884-1122 6-228 (306)
246 PRK14267 phosphate ABC transpo 100.0 1.3E-41 2.8E-46 374.9 23.3 225 885-1129 4-245 (253)
247 PRK11831 putative ABC transpor 100.0 1.2E-41 2.7E-46 377.4 23.1 226 885-1132 7-244 (269)
248 cd03258 ABC_MetN_methionine_tr 100.0 1E-41 2.2E-46 371.1 22.0 219 257-482 2-230 (233)
249 PRK11629 lolD lipoprotein tran 100.0 1.3E-41 2.8E-46 370.0 22.7 212 885-1115 5-228 (233)
250 PRK14242 phosphate transporter 100.0 1.2E-41 2.6E-46 375.2 22.6 220 255-482 5-237 (253)
251 PRK13652 cbiO cobalt transport 100.0 1.7E-41 3.6E-46 377.8 23.8 216 886-1122 4-228 (277)
252 PRK13633 cobalt transporter AT 100.0 1.4E-41 3.1E-46 378.9 23.4 219 885-1122 4-234 (280)
253 COG0410 LivF ABC-type branched 100.0 1.7E-41 3.7E-46 344.6 21.6 222 256-485 3-229 (237)
254 cd03263 ABC_subfamily_A The AB 100.0 8.9E-42 1.9E-46 368.3 20.7 215 257-480 1-219 (220)
255 TIGR02315 ABC_phnC phosphonate 100.0 1.5E-41 3.3E-46 372.4 22.9 220 257-480 2-233 (243)
256 cd03226 ABC_cobalt_CbiO_domain 100.0 6.2E-42 1.4E-46 365.0 19.2 200 887-1111 1-205 (205)
257 PRK10619 histidine/lysine/argi 100.0 2.1E-41 4.7E-46 373.7 24.0 220 883-1124 3-244 (257)
258 PRK11308 dppF dipeptide transp 100.0 2.2E-41 4.8E-46 382.8 24.6 228 885-1130 5-253 (327)
259 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 2.5E-41 5.4E-46 368.5 24.1 214 886-1122 2-222 (236)
260 PRK14247 phosphate ABC transpo 100.0 1.9E-41 4.2E-46 372.9 23.4 226 885-1130 3-243 (250)
261 cd03218 ABC_YhbG The ABC trans 100.0 1.4E-41 3.1E-46 369.8 22.0 213 886-1121 1-222 (232)
262 PRK11607 potG putrescine trans 100.0 1.3E-41 2.8E-46 390.3 22.6 220 885-1128 19-246 (377)
263 PRK13644 cbiO cobalt transport 100.0 2.5E-41 5.3E-46 375.5 23.9 215 886-1122 2-225 (274)
264 COG1118 CysA ABC-type sulfate/ 100.0 6.5E-42 1.4E-46 358.3 18.0 219 885-1127 2-233 (345)
265 cd03295 ABC_OpuCA_Osmoprotecti 100.0 1.6E-41 3.6E-46 371.3 22.1 217 257-482 1-225 (242)
266 cd03268 ABC_BcrA_bacitracin_re 100.0 1.5E-41 3.3E-46 363.0 21.2 204 886-1114 1-208 (208)
267 PRK13636 cbiO cobalt transport 100.0 3.1E-41 6.8E-46 376.4 24.6 220 256-484 5-233 (283)
268 cd03218 ABC_YhbG The ABC trans 100.0 1.9E-41 4.1E-46 368.9 22.3 216 257-482 1-222 (232)
269 cd03291 ABCC_CFTR1 The CFTR su 100.0 1.5E-40 3.2E-45 367.7 29.7 240 230-491 16-256 (282)
270 PRK13640 cbiO cobalt transport 100.0 2.9E-41 6.3E-46 376.5 24.3 219 884-1122 4-233 (282)
271 PRK10070 glycine betaine trans 100.0 1.7E-41 3.6E-46 389.9 22.9 207 902-1127 42-260 (400)
272 PRK11000 maltose/maltodextrin 100.0 1.8E-41 3.9E-46 390.0 23.2 216 256-483 3-224 (369)
273 COG4555 NatA ABC-type Na+ tran 100.0 4.2E-42 9.1E-47 337.5 15.2 218 257-482 2-222 (245)
274 COG4175 ProV ABC-type proline/ 100.0 6.6E-42 1.4E-46 357.7 17.6 229 256-491 4-265 (386)
275 PRK10575 iron-hydroxamate tran 100.0 2E-41 4.3E-46 375.2 22.6 215 885-1121 11-237 (265)
276 cd03264 ABC_drug_resistance_li 100.0 1.9E-41 4.1E-46 363.1 21.6 203 886-1114 1-211 (211)
277 PRK13642 cbiO cobalt transport 100.0 5E-41 1.1E-45 373.9 25.7 223 256-485 4-232 (277)
278 PRK13537 nodulation ABC transp 100.0 1.8E-41 3.9E-46 381.2 22.3 216 256-482 7-227 (306)
279 PRK09493 glnQ glutamine ABC tr 100.0 2.8E-41 6E-46 369.2 23.2 214 886-1122 2-226 (240)
280 PRK14259 phosphate ABC transpo 100.0 4.2E-41 9.1E-46 372.9 24.9 224 884-1127 12-259 (269)
281 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 1.1E-41 2.4E-46 367.0 19.7 208 257-471 1-218 (218)
282 PRK11264 putative amino-acid A 100.0 3.3E-41 7E-46 371.3 23.8 216 886-1124 4-236 (250)
283 PRK11629 lolD lipoprotein tran 100.0 3.3E-41 7.1E-46 366.8 23.5 214 256-476 5-228 (233)
284 PRK14273 phosphate ABC transpo 100.0 2.5E-41 5.5E-46 372.7 22.8 218 255-482 6-238 (254)
285 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 2.6E-41 5.7E-46 368.2 22.6 216 257-483 2-222 (236)
286 cd03266 ABC_NatA_sodium_export 100.0 1.8E-41 3.9E-46 365.4 21.0 211 257-475 2-218 (218)
287 PRK13641 cbiO cobalt transport 100.0 2.8E-41 6.1E-46 377.6 23.2 218 885-1122 2-235 (287)
288 PRK14244 phosphate ABC transpo 100.0 2E-41 4.3E-46 372.8 21.6 222 886-1127 6-243 (251)
289 PRK14237 phosphate transporter 100.0 4.4E-41 9.5E-46 372.6 24.2 221 884-1124 19-254 (267)
290 PRK11231 fecE iron-dicitrate t 100.0 2.9E-41 6.3E-46 372.2 22.6 221 886-1131 3-235 (255)
291 PRK14248 phosphate ABC transpo 100.0 4.4E-41 9.6E-46 373.3 24.2 220 885-1124 21-255 (268)
292 PRK14268 phosphate ABC transpo 100.0 4.1E-41 8.8E-46 371.5 23.7 223 885-1127 12-248 (258)
293 cd03250 ABCC_MRP_domain1 Domai 100.0 5.5E-41 1.2E-45 357.4 23.8 200 257-470 1-204 (204)
294 PRK10744 pstB phosphate transp 100.0 6.3E-41 1.4E-45 370.4 25.1 220 255-482 12-244 (260)
295 PRK13648 cbiO cobalt transport 100.0 3.9E-41 8.6E-46 373.7 23.6 218 885-1122 7-232 (269)
296 PRK14251 phosphate ABC transpo 100.0 3.4E-41 7.4E-46 371.1 22.8 224 885-1128 4-242 (251)
297 TIGR02211 LolD_lipo_ex lipopro 100.0 2.8E-41 6E-46 364.7 21.6 207 886-1111 2-220 (221)
298 PRK11124 artP arginine transpo 100.0 4E-41 8.6E-46 368.5 23.1 214 886-1122 3-231 (242)
299 PRK14235 phosphate transporter 100.0 3.9E-41 8.5E-46 373.0 23.1 221 254-482 17-251 (267)
300 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 1.6E-41 3.4E-46 365.9 19.3 205 886-1110 1-218 (218)
301 PRK14245 phosphate ABC transpo 100.0 4.6E-41 1E-45 369.7 23.4 222 885-1126 3-239 (250)
302 PRK14274 phosphate ABC transpo 100.0 5.3E-41 1.2E-45 371.0 24.0 223 885-1127 12-249 (259)
303 cd03226 ABC_cobalt_CbiO_domain 100.0 2.4E-41 5.2E-46 360.5 20.5 199 258-472 1-205 (205)
304 cd03264 ABC_drug_resistance_li 100.0 3.1E-41 6.6E-46 361.5 21.4 207 257-475 1-211 (211)
305 PRK13649 cbiO cobalt transport 100.0 4.6E-41 9.9E-46 375.7 23.6 218 886-1122 3-235 (280)
306 PRK15079 oligopeptide ABC tran 100.0 5.4E-41 1.2E-45 379.9 24.4 222 255-483 7-252 (331)
307 PRK13641 cbiO cobalt transport 100.0 4.6E-41 1E-45 375.9 23.6 221 256-483 2-235 (287)
308 PRK14239 phosphate transporter 100.0 5E-41 1.1E-45 370.3 23.5 221 885-1125 5-240 (252)
309 TIGR02769 nickel_nikE nickel i 100.0 5.3E-41 1.2E-45 371.8 23.8 227 886-1130 3-249 (265)
310 TIGR03415 ABC_choXWV_ATP choli 100.0 3.4E-41 7.4E-46 384.4 22.6 210 901-1129 37-262 (382)
311 PRK11614 livF leucine/isoleuci 100.0 4.4E-41 9.6E-46 366.9 22.6 214 885-1121 5-226 (237)
312 cd03301 ABC_MalK_N The N-termi 100.0 2.4E-41 5.1E-46 363.1 20.1 205 886-1114 1-213 (213)
313 PRK11607 potG putrescine trans 100.0 3.6E-41 7.8E-46 386.5 22.8 217 255-483 18-240 (377)
314 cd03265 ABC_DrrA DrrA is the A 100.0 4.2E-41 9E-46 362.8 21.9 213 257-480 1-219 (220)
315 cd03225 ABC_cobalt_CbiO_domain 100.0 2.9E-41 6.2E-46 361.9 20.5 202 887-1109 1-211 (211)
316 TIGR02673 FtsE cell division A 100.0 3E-41 6.5E-46 362.6 20.7 202 886-1109 2-214 (214)
317 PRK13638 cbiO cobalt transport 100.0 4.6E-41 9.9E-46 373.6 22.8 214 886-1122 2-226 (271)
318 PRK14240 phosphate transporter 100.0 7.5E-41 1.6E-45 368.2 24.3 224 884-1127 2-240 (250)
319 PRK13632 cbiO cobalt transport 100.0 9.8E-41 2.1E-45 370.6 25.4 220 256-483 7-232 (271)
320 TIGR01288 nodI ATP-binding ABC 100.0 4.3E-41 9.2E-46 379.2 22.7 214 885-1122 4-225 (303)
321 PRK11831 putative ABC transpor 100.0 4.5E-41 9.7E-46 372.9 22.5 218 256-483 7-234 (269)
322 TIGR03411 urea_trans_UrtD urea 100.0 9.9E-41 2.1E-45 365.5 25.0 222 256-482 2-231 (242)
323 PRK11614 livF leucine/isoleuci 100.0 6E-41 1.3E-45 365.9 23.1 218 256-482 5-226 (237)
324 cd03292 ABC_FtsE_transporter F 100.0 3.1E-41 6.7E-46 362.6 20.6 203 886-1110 1-214 (214)
325 PRK13652 cbiO cobalt transport 100.0 1.1E-40 2.3E-45 371.3 25.6 220 256-484 3-229 (277)
326 PRK14236 phosphate transporter 100.0 8.7E-41 1.9E-45 371.3 24.8 221 883-1123 23-258 (272)
327 PRK14256 phosphate ABC transpo 100.0 7.7E-41 1.7E-45 368.3 24.0 225 883-1127 2-242 (252)
328 PRK09473 oppD oligopeptide tra 100.0 4.7E-41 1E-45 380.7 22.8 229 885-1130 12-260 (330)
329 PRK14262 phosphate ABC transpo 100.0 6E-41 1.3E-45 368.9 23.1 227 885-1131 3-244 (250)
330 cd03293 ABC_NrtD_SsuB_transpor 100.0 2.1E-41 4.6E-46 365.1 19.1 207 886-1116 1-218 (220)
331 TIGR03411 urea_trans_UrtD urea 100.0 6.2E-41 1.3E-45 367.2 23.0 212 886-1121 3-231 (242)
332 PRK09493 glnQ glutamine ABC tr 100.0 4.4E-41 9.5E-46 367.7 21.8 216 257-482 2-225 (240)
333 PRK13645 cbiO cobalt transport 100.0 5.4E-41 1.2E-45 376.4 23.0 221 883-1122 4-241 (289)
334 TIGR02769 nickel_nikE nickel i 100.0 5.5E-41 1.2E-45 371.7 22.8 229 256-491 2-250 (265)
335 PRK14267 phosphate ABC transpo 100.0 5E-41 1.1E-45 370.3 22.4 220 256-483 4-238 (253)
336 PRK13649 cbiO cobalt transport 100.0 1.3E-40 2.8E-45 372.0 25.9 220 257-483 3-235 (280)
337 PRK11022 dppD dipeptide transp 100.0 6.9E-41 1.5E-45 379.1 23.9 229 886-1130 4-252 (326)
338 cd03294 ABC_Pro_Gly_Bertaine T 100.0 2.8E-41 6E-46 374.3 20.1 215 258-482 26-250 (269)
339 cd03247 ABCC_cytochrome_bd The 100.0 4.9E-41 1.1E-45 349.3 20.7 178 257-475 1-178 (178)
340 PRK10070 glycine betaine trans 100.0 7.5E-41 1.6E-45 384.5 24.3 213 273-492 42-266 (400)
341 cd03268 ABC_BcrA_bacitracin_re 100.0 5E-41 1.1E-45 359.1 21.3 203 257-475 1-208 (208)
342 PRK13644 cbiO cobalt transport 100.0 1.1E-40 2.4E-45 370.2 24.8 218 257-483 2-225 (274)
343 TIGR02211 LolD_lipo_ex lipopro 100.0 5.6E-41 1.2E-45 362.4 21.8 209 257-472 2-220 (221)
344 cd03235 ABC_Metallic_Cations A 100.0 2.9E-41 6.3E-46 362.3 19.2 199 887-1114 1-213 (213)
345 PRK11247 ssuB aliphatic sulfon 100.0 6.8E-41 1.5E-45 366.9 22.3 206 885-1117 12-219 (257)
346 PRK13640 cbiO cobalt transport 100.0 1.2E-40 2.6E-45 371.5 24.7 221 255-483 4-233 (282)
347 PRK13645 cbiO cobalt transport 100.0 1.3E-40 2.8E-45 373.2 25.1 222 255-483 5-241 (289)
348 PRK13633 cobalt transporter AT 100.0 9.8E-41 2.1E-45 372.2 23.9 222 256-484 4-235 (280)
349 TIGR01288 nodI ATP-binding ABC 100.0 5.7E-41 1.2E-45 378.1 22.2 216 256-482 4-224 (303)
350 PRK11264 putative amino-acid A 100.0 5.8E-41 1.3E-45 369.3 21.8 217 256-482 3-233 (250)
351 cd03300 ABC_PotA_N PotA is an 100.0 4.9E-41 1.1E-45 364.9 20.9 214 886-1123 1-222 (232)
352 PRK13536 nodulation factor exp 100.0 6.3E-41 1.4E-45 380.2 22.7 216 256-482 41-261 (340)
353 TIGR03873 F420-0_ABC_ATP propo 100.0 8E-41 1.7E-45 368.9 22.8 213 886-1121 2-226 (256)
354 PRK10575 iron-hydroxamate tran 100.0 9.3E-41 2E-45 369.8 23.4 225 256-491 11-245 (265)
355 PRK14254 phosphate ABC transpo 100.0 1.4E-40 3.1E-45 370.9 24.9 221 884-1124 38-272 (285)
356 cd03293 ABC_NrtD_SsuB_transpor 100.0 4.1E-41 9E-46 362.8 20.0 209 257-477 1-218 (220)
357 PRK14247 phosphate ABC transpo 100.0 8.6E-41 1.9E-45 367.7 22.9 220 256-483 3-235 (250)
358 PRK14260 phosphate ABC transpo 100.0 1E-40 2.2E-45 368.5 23.5 222 884-1125 6-247 (259)
359 PRK10253 iron-enterobactin tra 100.0 8.9E-41 1.9E-45 370.0 23.1 215 885-1121 7-233 (265)
360 PRK13648 cbiO cobalt transport 100.0 1.9E-40 4.1E-45 368.3 25.6 221 256-484 7-233 (269)
361 cd03290 ABCC_SUR1_N The SUR do 100.0 1.1E-40 2.4E-45 358.9 23.1 211 887-1109 2-218 (218)
362 PRK10908 cell division protein 100.0 8.2E-41 1.8E-45 361.0 22.1 205 886-1112 2-217 (222)
363 TIGR03410 urea_trans_UrtE urea 100.0 4.5E-41 9.8E-46 365.3 20.1 212 257-480 1-219 (230)
364 PRK10895 lipopolysaccharide AB 100.0 8.8E-41 1.9E-45 365.5 22.5 217 256-482 3-226 (241)
365 PRK14261 phosphate ABC transpo 100.0 1.2E-40 2.7E-45 367.0 23.7 228 885-1132 6-248 (253)
366 PRK14266 phosphate ABC transpo 100.0 1.4E-40 3E-45 366.0 24.1 224 885-1128 3-241 (250)
367 PRK14249 phosphate ABC transpo 100.0 1.6E-40 3.5E-45 365.6 24.5 219 885-1123 4-237 (251)
368 TIGR03415 ABC_choXWV_ATP choli 100.0 8.4E-41 1.8E-45 381.2 23.1 205 272-483 37-255 (382)
369 PRK14259 phosphate ABC transpo 100.0 1.2E-40 2.6E-45 369.2 23.7 218 255-482 12-253 (269)
370 PRK14274 phosphate ABC transpo 100.0 1.2E-40 2.6E-45 368.2 23.5 219 256-482 12-243 (259)
371 PRK14243 phosphate transporter 100.0 1.6E-40 3.4E-45 367.6 24.2 221 885-1125 10-252 (264)
372 PRK11231 fecE iron-dicitrate t 100.0 1.2E-40 2.6E-45 367.3 23.3 224 257-491 3-235 (255)
373 PRK13536 nodulation factor exp 100.0 7.2E-41 1.6E-45 379.8 22.1 214 885-1122 41-262 (340)
374 TIGR03410 urea_trans_UrtE urea 100.0 8.1E-41 1.7E-45 363.3 21.6 214 886-1120 1-220 (230)
375 PRK11247 ssuB aliphatic sulfon 100.0 1.3E-40 2.9E-45 364.7 23.3 205 255-478 11-219 (257)
376 cd03301 ABC_MalK_N The N-termi 100.0 6.5E-41 1.4E-45 359.7 20.5 207 257-475 1-213 (213)
377 TIGR00968 3a0106s01 sulfate AB 100.0 1.4E-40 3.1E-45 362.3 23.3 213 886-1122 1-221 (237)
378 PRK10895 lipopolysaccharide AB 100.0 1.1E-40 2.4E-45 364.8 22.5 214 886-1122 4-227 (241)
379 PRK13639 cbiO cobalt transport 100.0 1.2E-40 2.6E-45 370.5 23.1 215 886-1122 2-227 (275)
380 PRK14238 phosphate transporter 100.0 1.5E-40 3.3E-45 368.8 23.9 223 885-1127 24-261 (271)
381 PRK14258 phosphate ABC transpo 100.0 1.2E-40 2.5E-45 368.2 22.7 224 884-1125 6-249 (261)
382 PRK15112 antimicrobial peptide 100.0 1.4E-40 3E-45 368.6 23.5 231 885-1134 4-253 (267)
383 PRK10619 histidine/lysine/argi 100.0 1E-40 2.2E-45 368.3 22.3 218 255-482 4-241 (257)
384 PRK14268 phosphate ABC transpo 100.0 1.1E-40 2.4E-45 368.0 22.5 219 256-482 12-242 (258)
385 TIGR03005 ectoine_ehuA ectoine 100.0 8.5E-41 1.9E-45 368.0 21.5 217 257-483 1-237 (252)
386 PRK14270 phosphate ABC transpo 100.0 1.9E-40 4E-45 365.1 24.2 219 885-1123 4-237 (251)
387 cd03225 ABC_cobalt_CbiO_domain 100.0 6.1E-41 1.3E-45 359.4 19.8 205 258-470 1-211 (211)
388 PRK13638 cbiO cobalt transport 100.0 2.3E-40 5E-45 367.9 25.1 217 257-483 2-226 (271)
389 PRK11124 artP arginine transpo 100.0 1.2E-40 2.6E-45 364.7 22.5 217 256-482 2-230 (242)
390 PRK11300 livG leucine/isoleuci 100.0 1.7E-40 3.7E-45 366.6 23.9 222 256-482 5-243 (255)
391 PRK14248 phosphate ABC transpo 100.0 1.7E-40 3.6E-45 368.7 23.9 220 255-482 20-252 (268)
392 PRK14236 phosphate transporter 100.0 1.3E-40 2.9E-45 369.8 23.1 221 254-482 23-256 (272)
393 PRK10584 putative ABC transpor 100.0 1.2E-40 2.6E-45 361.5 22.1 210 885-1113 6-227 (228)
394 PRK14249 phosphate ABC transpo 100.0 1.8E-40 4E-45 365.1 23.8 219 256-482 4-235 (251)
395 PRK14240 phosphate transporter 100.0 1.8E-40 4E-45 365.1 23.7 219 256-482 3-234 (250)
396 TIGR03522 GldA_ABC_ATP gliding 100.0 1E-40 2.2E-45 375.4 22.0 215 257-482 3-221 (301)
397 cd03247 ABCC_cytochrome_bd The 100.0 1.1E-40 2.3E-45 346.8 20.5 178 886-1114 1-178 (178)
398 PRK11300 livG leucine/isoleuci 100.0 1.5E-40 3.2E-45 367.2 22.9 216 885-1122 5-244 (255)
399 PRK13548 hmuV hemin importer A 100.0 2E-40 4.4E-45 365.4 23.8 215 886-1122 3-231 (258)
400 cd03257 ABC_NikE_OppD_transpor 100.0 1.3E-40 2.7E-45 361.7 21.7 213 257-475 2-228 (228)
401 PRK14271 phosphate ABC transpo 100.0 2.9E-40 6.2E-45 367.0 25.0 221 885-1125 21-255 (276)
402 PRK15093 antimicrobial peptide 100.0 2E-40 4.3E-45 376.8 24.2 230 885-1130 3-257 (330)
403 COG1131 CcmA ABC-type multidru 100.0 8.8E-41 1.9E-45 371.6 20.8 217 256-482 4-226 (293)
404 PRK11308 dppF dipeptide transp 100.0 1.4E-40 3.1E-45 376.2 22.8 221 256-483 5-245 (327)
405 PRK14245 phosphate ABC transpo 100.0 1.7E-40 3.6E-45 365.3 22.6 219 256-482 3-234 (250)
406 PRK13548 hmuV hemin importer A 100.0 2.3E-40 5.1E-45 364.9 23.8 217 256-482 2-230 (258)
407 cd03269 ABC_putative_ATPase Th 100.0 9.2E-41 2E-45 357.6 20.0 202 886-1114 1-210 (210)
408 TIGR02673 FtsE cell division A 100.0 1E-40 2.2E-45 358.5 20.4 205 257-470 2-214 (214)
409 cd03298 ABC_ThiQ_thiamine_tran 100.0 1.5E-40 3.2E-45 356.2 21.6 203 886-1114 1-211 (211)
410 PRK14237 phosphate transporter 100.0 2.2E-40 4.8E-45 367.0 23.7 220 255-482 19-251 (267)
411 PRK14263 phosphate ABC transpo 100.0 3E-40 6.5E-45 364.1 24.6 225 885-1129 8-253 (261)
412 PRK14239 phosphate transporter 100.0 1.6E-40 3.4E-45 366.3 22.2 220 256-483 5-237 (252)
413 cd03246 ABCC_Protease_Secretio 100.0 1.6E-40 3.5E-45 343.6 20.8 172 257-471 1-173 (173)
414 PRK11144 modC molybdate transp 100.0 1.6E-40 3.4E-45 380.6 23.0 214 886-1124 2-221 (352)
415 PRK13639 cbiO cobalt transport 100.0 2.6E-40 5.5E-45 367.8 23.7 218 257-483 2-227 (275)
416 PRK14275 phosphate ABC transpo 100.0 2.9E-40 6.3E-45 368.9 24.1 225 885-1129 39-278 (286)
417 PRK10247 putative ABC transpor 100.0 1.3E-40 2.8E-45 359.7 20.5 211 256-478 7-223 (225)
418 PRK14253 phosphate ABC transpo 100.0 2.8E-40 6.2E-45 363.4 23.6 221 885-1125 3-237 (249)
419 PRK14251 phosphate ABC transpo 100.0 1.3E-40 2.8E-45 366.5 20.9 217 256-482 4-235 (251)
420 PRK10771 thiQ thiamine transpo 100.0 3.1E-40 6.8E-45 358.8 23.5 211 886-1122 2-220 (232)
421 PRK14238 phosphate transporter 100.0 3.4E-40 7.5E-45 366.0 24.2 221 256-483 24-256 (271)
422 COG4178 ABC-type uncharacteriz 100.0 9.4E-38 2E-42 363.1 45.4 411 39-467 152-587 (604)
423 PRK14241 phosphate transporter 100.0 2.7E-40 5.8E-45 365.2 23.2 219 885-1123 4-244 (258)
424 PRK11022 dppD dipeptide transp 100.0 1.6E-40 3.5E-45 376.0 21.9 221 256-483 3-244 (326)
425 cd03246 ABCC_Protease_Secretio 100.0 1.7E-40 3.7E-45 343.4 20.0 173 886-1110 1-173 (173)
426 PRK14243 phosphate transporter 100.0 3.4E-40 7.4E-45 364.9 23.7 217 256-482 10-248 (264)
427 COG1137 YhbG ABC-type (unclass 100.0 1.5E-41 3.2E-46 333.2 11.3 223 256-484 4-230 (243)
428 cd03292 ABC_FtsE_transporter F 100.0 1.5E-40 3.3E-45 357.3 20.3 206 257-471 1-214 (214)
429 cd03257 ABC_NikE_OppD_transpor 100.0 3.3E-40 7.1E-45 358.5 23.1 210 886-1114 2-228 (228)
430 PRK10247 putative ABC transpor 100.0 1.7E-40 3.7E-45 358.7 20.6 212 885-1117 7-223 (225)
431 cd03290 ABCC_SUR1_N The SUR do 100.0 4.8E-40 1E-44 354.0 24.1 210 258-470 2-218 (218)
432 PRK10253 iron-enterobactin tra 100.0 3.5E-40 7.7E-45 365.2 23.6 218 255-482 6-233 (265)
433 PRK14272 phosphate ABC transpo 100.0 3.6E-40 7.8E-45 363.4 23.6 225 885-1129 4-244 (252)
434 cd03262 ABC_HisP_GlnQ_permease 100.0 1.4E-40 3E-45 357.3 19.8 202 886-1110 1-213 (213)
435 PRK14252 phosphate ABC transpo 100.0 3.8E-40 8.3E-45 365.2 23.9 221 883-1123 14-251 (265)
436 PRK09473 oppD oligopeptide tra 100.0 1.6E-40 3.6E-45 376.2 21.3 222 256-483 12-252 (330)
437 cd03269 ABC_putative_ATPase Th 100.0 1.2E-40 2.6E-45 356.6 19.1 205 257-475 1-210 (210)
438 TIGR01188 drrA daunorubicin re 100.0 1.4E-40 3.1E-45 374.7 20.7 201 901-1122 6-214 (302)
439 cd03235 ABC_Metallic_Cations A 100.0 1.2E-40 2.5E-45 357.6 18.9 202 258-475 1-213 (213)
440 cd03299 ABC_ModC_like Archeal 100.0 3.3E-40 7.2E-45 358.9 22.8 213 886-1123 1-221 (235)
441 PRK14270 phosphate ABC transpo 100.0 4.3E-40 9.2E-45 362.2 23.9 220 256-483 4-236 (251)
442 PRK14244 phosphate ABC transpo 100.0 1.4E-40 2.9E-45 366.2 19.8 217 257-483 6-238 (251)
443 COG0411 LivG ABC-type branched 100.0 1.1E-40 2.4E-45 341.3 17.6 225 256-485 4-242 (250)
444 PRK10908 cell division protein 100.0 5.4E-40 1.2E-44 354.6 23.9 208 257-473 2-217 (222)
445 PRK14271 phosphate ABC transpo 100.0 3E-40 6.5E-45 366.8 22.5 220 256-483 21-252 (276)
446 PRK14261 phosphate ABC transpo 100.0 3.2E-40 7E-45 363.7 22.5 219 256-482 6-237 (253)
447 TIGR03522 GldA_ABC_ATP gliding 100.0 3.3E-40 7.2E-45 371.2 23.0 212 886-1122 3-222 (301)
448 PRK14253 phosphate ABC transpo 100.0 3.4E-40 7.3E-45 362.8 22.5 219 256-482 3-233 (249)
449 TIGR03873 F420-0_ABC_ATP propo 100.0 2.7E-40 5.9E-45 364.7 21.8 221 257-482 2-226 (256)
450 PRK13547 hmuV hemin importer A 100.0 4.4E-40 9.5E-45 363.7 23.4 213 886-1121 2-244 (272)
451 PRK14256 phosphate ABC transpo 100.0 4E-40 8.6E-45 362.7 22.9 220 255-482 3-236 (252)
452 PRK11701 phnK phosphonate C-P 100.0 5.2E-40 1.1E-44 362.9 23.8 225 885-1130 6-250 (258)
453 PRK14246 phosphate ABC transpo 100.0 4.8E-40 1E-44 361.6 23.2 227 885-1131 10-251 (257)
454 PRK13547 hmuV hemin importer A 100.0 3.9E-40 8.5E-45 364.0 22.5 221 257-482 2-244 (272)
455 COG1131 CcmA ABC-type multidru 100.0 2.8E-40 6.1E-45 367.5 21.4 216 885-1122 4-227 (293)
456 cd03262 ABC_HisP_GlnQ_permease 100.0 2E-40 4.3E-45 356.1 19.4 205 257-471 1-213 (213)
457 PRK14255 phosphate ABC transpo 100.0 4.5E-40 9.7E-45 362.5 22.7 223 885-1127 5-242 (252)
458 PRK10584 putative ABC transpor 100.0 5E-40 1.1E-44 356.6 22.7 212 256-474 6-227 (228)
459 TIGR01978 sufC FeS assembly AT 100.0 3.7E-40 8E-45 361.6 21.9 214 886-1120 1-233 (243)
460 TIGR01277 thiQ thiamine ABC tr 100.0 4.5E-40 9.7E-45 352.7 22.0 204 886-1115 1-212 (213)
461 PRK00349 uvrA excinuclease ABC 100.0 2.7E-39 5.8E-44 402.6 32.1 103 377-481 472-584 (943)
462 PRK14265 phosphate ABC transpo 100.0 8.4E-40 1.8E-44 363.2 24.5 220 885-1124 20-261 (274)
463 PRK09984 phosphonate/organopho 100.0 7.3E-40 1.6E-44 362.5 23.9 227 885-1136 4-254 (262)
464 PRK09984 phosphonate/organopho 100.0 8E-40 1.7E-44 362.2 24.0 230 256-492 4-250 (262)
465 PRK14260 phosphate ABC transpo 100.0 4.7E-40 1E-44 363.2 22.1 218 255-482 6-243 (259)
466 cd03298 ABC_ThiQ_thiamine_tran 100.0 6.3E-40 1.4E-44 351.4 22.4 205 257-475 1-211 (211)
467 PRK14254 phosphate ABC transpo 100.0 7.2E-40 1.6E-44 365.2 23.7 219 255-482 38-269 (285)
468 PRK14264 phosphate ABC transpo 100.0 8.3E-40 1.8E-44 368.4 24.4 220 884-1123 44-291 (305)
469 PRK10418 nikD nickel transport 100.0 7.4E-40 1.6E-44 360.6 23.3 228 885-1134 4-244 (254)
470 PRK11144 modC molybdate transp 100.0 5.4E-40 1.2E-44 376.2 22.8 211 257-484 2-220 (352)
471 PRK10771 thiQ thiamine transpo 100.0 1.3E-39 2.9E-44 353.9 24.7 215 257-484 2-221 (232)
472 TIGR01188 drrA daunorubicin re 100.0 3E-40 6.5E-45 372.1 20.2 203 272-482 6-213 (302)
473 PRK14262 phosphate ABC transpo 100.0 5.9E-40 1.3E-44 361.1 22.0 220 256-483 3-235 (250)
474 COG4619 ABC-type uncharacteriz 100.0 9.6E-41 2.1E-45 317.4 13.3 195 271-471 15-212 (223)
475 COG0410 LivF ABC-type branched 100.0 5.6E-40 1.2E-44 333.5 19.8 223 885-1123 3-228 (237)
476 PRK14272 phosphate ABC transpo 100.0 6.8E-40 1.5E-44 361.2 22.1 220 256-483 4-237 (252)
477 PRK15112 antimicrobial peptide 100.0 8.6E-40 1.9E-44 362.3 22.6 230 256-492 4-251 (267)
478 TIGR00968 3a0106s01 sulfate AB 100.0 6.8E-40 1.5E-44 357.0 21.3 214 257-482 1-220 (237)
479 PRK14265 phosphate ABC transpo 100.0 1.7E-39 3.7E-44 360.7 24.8 218 255-482 19-258 (274)
480 PRK11701 phnK phosphonate C-P 100.0 1E-39 2.2E-44 360.6 22.8 218 256-482 6-241 (258)
481 PRK14275 phosphate ABC transpo 100.0 8.6E-40 1.9E-44 365.1 22.2 221 255-483 38-271 (286)
482 PRK15093 antimicrobial peptide 100.0 8.8E-40 1.9E-44 371.5 22.6 227 256-489 3-256 (330)
483 cd03234 ABCG_White The White s 100.0 6.3E-40 1.4E-44 354.9 20.3 214 257-475 4-226 (226)
484 COG4181 Predicted ABC-type tra 100.0 3.8E-40 8.3E-45 314.4 16.2 214 256-474 6-227 (228)
485 PRK14266 phosphate ABC transpo 100.0 1.1E-39 2.4E-44 358.9 22.4 217 256-482 3-234 (250)
486 PRK11248 tauB taurine transpor 100.0 1E-39 2.2E-44 358.5 22.1 207 257-478 2-216 (255)
487 COG4598 HisP ABC-type histidin 100.0 1.3E-40 2.8E-45 319.6 12.9 218 256-483 6-242 (256)
488 TIGR02142 modC_ABC molybdenum 100.0 8.5E-40 1.8E-44 375.3 22.3 215 890-1128 4-228 (354)
489 PRK14241 phosphate transporter 100.0 9.8E-40 2.1E-44 360.7 21.9 219 256-482 4-242 (258)
490 COG4555 NatA ABC-type Na+ tran 100.0 3.7E-40 8.1E-45 323.8 16.3 214 886-1122 2-223 (245)
491 PRK14252 phosphate ABC transpo 100.0 1.4E-39 3.1E-44 360.6 23.2 219 254-482 14-249 (265)
492 cd03234 ABCG_White The White s 100.0 4E-40 8.6E-45 356.5 18.3 206 886-1114 4-226 (226)
493 cd03300 ABC_PotA_N PotA is an 100.0 6.9E-40 1.5E-44 355.9 20.1 214 257-482 1-220 (232)
494 TIGR01978 sufC FeS assembly AT 100.0 1E-39 2.2E-44 358.1 21.3 214 257-480 1-232 (243)
495 PRK14263 phosphate ABC transpo 100.0 1.6E-39 3.5E-44 358.2 22.9 218 256-483 8-246 (261)
496 PRK14258 phosphate ABC transpo 100.0 1.4E-39 2.9E-44 359.7 22.1 220 255-482 6-245 (261)
497 PRK10419 nikE nickel transport 100.0 1.7E-39 3.8E-44 359.7 23.0 230 256-489 3-248 (268)
498 COG1123 ATPase components of v 100.0 1.3E-39 2.7E-44 374.1 22.4 232 255-490 279-528 (539)
499 PRK11248 tauB taurine transpor 100.0 1.2E-39 2.6E-44 358.0 21.3 204 886-1116 2-215 (255)
500 TIGR01277 thiQ thiamine ABC tr 100.0 2.1E-39 4.6E-44 347.4 22.4 202 257-476 1-212 (213)
No 1
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=4.8e-203 Score=1827.88 Aligned_cols=1120 Identities=46% Similarity=0.760 Sum_probs=1027.9
Q ss_pred hHHHHHHHHHHHHHHHHH---------HcCCcccccccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 3 AVKLILSWHPKGNRVLMK---------IGGEVGAFDTDLSTGKVITGVSSHMSVIRDAIGEKLGHFLSSFATFFSGVLIA 73 (1139)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~---------l~~~~~~f~~~~~~G~l~~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~ 73 (1139)
+..+.+||.++++|++.| ||++++|||.+ .+|++.+++++|++.|++++++.++.+++.+.++++++++.
T Consensus 88 ~~~q~~c~~~~geRq~~riR~~yl~~iLrQdi~~fD~~-~~g~~~~~l~~d~~~I~d~~geKvg~~i~~~~~fi~g~ii~ 166 (1228)
T KOG0055|consen 88 GFIQVSCWMRTGERQTARIRSKYLKAILRQDIGWFDTN-STGELVTRLSDDIELIQDAIGEKVGNFIQLLATFIAGFVIG 166 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccceeecc-cccceEEEecCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 457889999999999998 99999999998 67999999999999999999999999999999999999999
Q ss_pred HhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHH
Q 048639 74 VICCWEVSLLIFLVVPMILVIGATYTKRMNAVSATKLLYLSEATSMIEQTISQIKTVFAFVGERSEIKSFSDCMDKQIII 153 (1139)
Q Consensus 74 ~~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~ 153 (1139)
|+..|+++++++.+.|++++....+.+.+.+...++++.++++.++++|++.++|||.+|+.|+.+.++|.+..+...+.
T Consensus 167 F~~~W~Ltlv~l~~~Pli~~~g~~~a~~~~~~t~ke~~~ya~Ag~iaEe~i~~iRTV~af~gq~~e~~ry~~~L~~~~k~ 246 (1228)
T KOG0055|consen 167 FYYGWKLTLVMLSFIPLIAIAGGLLARFLSKLTEKEQEAYAKAGSIAEEVISSIRTVYAFNGEKKEIERYSKALENALKF 246 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 154 SRGEALIKGVGLGMFQSVTFCCWALIIWVGAVVVTAKRSTGGEVLAAVMSILFGAIALTYAAPDMQVFNQAKAAGFEIFQ 233 (1139)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~l~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ri~~ 233 (1139)
..+...+.++..++..++.++.+++.+|+|+.++..+..++|.+++++..++.....+.+..|.+..+..+++++.+|++
T Consensus 247 gi~~g~~~G~~~G~~~~~~~~~~a~~~WyG~~li~~~~~~~g~v~~v~~~vl~g~~sLgqa~p~l~~f~~a~~aa~~I~~ 326 (1228)
T KOG0055|consen 247 GIKKGLFKGLGLGFTFFLLFASYALAFWYGSTLILNGGYNGGDVITVFFSVLIGGMSLGQASPHLSAFAKARAAAYRIFE 326 (1228)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeehhhhhhhhhccccchHHHhccccchHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhccCCCCcc-CCCCccccCCCccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCC
Q 048639 234 VIQRKPRISY-SSKGKELEKIDGNIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPS 312 (1139)
Q Consensus 234 ~l~~~~~~~~-~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~ 312 (1139)
.++..|.+.. ...+.......+.|+|+||+|+||.+++.++|+|+||+|++|+.+||||||||||||++++|.|+|+|+
T Consensus 327 ~i~~~~~i~~~~~~~~~~~~~~g~ief~nV~FsYPsRpdv~Il~g~sl~i~~G~~valVG~SGsGKST~i~LL~RfydP~ 406 (1228)
T KOG0055|consen 327 TIDRKPSIDPYSKGGRVLSSIKGEIEFRNVCFSYPSRPDVKILKGVSLKIPSGQTVALVGPSGSGKSTLIQLLARFYDPT 406 (1228)
T ss_pred HhcCCCCCCcccccCCcccccccceEEEEEEecCCCCCcchhhCCeEEEeCCCCEEEEECCCCCCHHHHHHHHHHhcCCC
Confidence 9998877632 222223445678999999999999998889999999999999999999999999999999999999999
Q ss_pred ccEEEECCccCCCCCHHHHhcceEEEecCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCCCcccccc
Q 048639 313 NGDILIDSLNIKDLDLKSLRKNIGAVSQEPSLFTGSLMDNIKVGNMDADDEQIYNASMMANAHSFISQLPDQYSTELGQR 392 (1139)
Q Consensus 313 ~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~ 392 (1139)
+|+|.+||.|+++++.+|+|++||.|+|+|.||++||+|||.||+|+++.+++.+||+++++++|+..+|+||+|.+||+
T Consensus 407 ~G~V~idG~di~~~~~~~lr~~iglV~QePvlF~~tI~eNI~~G~~dat~~~i~~a~k~ana~~fi~~lp~g~~T~vge~ 486 (1228)
T KOG0055|consen 407 SGEVLIDGEDIRNLNLKWLRSQIGLVSQEPVLFATTIRENIRYGKPDATREEIEEAAKAANAHDFILKLPDGYDTLVGER 486 (1228)
T ss_pred CceEEEcCccchhcchHHHHhhcCeeeechhhhcccHHHHHhcCCCcccHHHHHHHHHHccHHHHHHhhHHhhcccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhccCEEEEEeCcEEE
Q 048639 393 GVQLSGGQKQRIAIARAIVKNPPILLLDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVNADMIAVVEDGQVT 472 (1139)
Q Consensus 393 g~~LSgGqkqRi~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~ 472 (1139)
|.+|||||||||||||||++||+||||||||||||+++++.++++|.+..+|+|.|+||||++++++||+|++|++|+|+
T Consensus 487 g~qLSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~~grTTivVaHRLStIrnaD~I~v~~~G~Iv 566 (1228)
T KOG0055|consen 487 GVQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALDKASKGRTTIVVAHRLSTIRNADKIAVMEEGKIV 566 (1228)
T ss_pred CCCCChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHhhcCCeEEEEeeehhhhhccCEEEEEECCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecChhhhhccchHHHHHHhhccCCCCCCc-CcccccccccccchhhhhhhcccCchhhhhhc--ccccch----hhhcc
Q 048639 473 ETGTHHSLLQTSDFYNRLFTMQNLRPIDDS-RTKASTVESTSTEQQISVVEQLEEPEESKREL--SASTGQ----EEVKG 545 (1139)
Q Consensus 473 ~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~----~~~~~ 545 (1139)
|.|+|+||++..|.|.++++.|.....++. +...+..+................+....... ..++++ .....
T Consensus 567 E~G~h~ELi~~~G~Y~~lv~~Q~~~~~~~~~~~~~~~~~~~~~s~~~s~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~ 646 (1228)
T KOG0055|consen 567 EQGTHDELIALGGIYSSLVRLQELEKAAEDEEEEESLKEERSRSLKSSSSSPSLSRGSNRSNLLSVKPEGEDPEEPVSEE 646 (1228)
T ss_pred EecCHHHHHhccchHHHHHHHHhhhhhhhccccccchhhhhhhccccccccccccCCccccccccccccccccccccccc
Confidence 999999999999999999988865432221 00000000000000000000000000000000 000000 00001
Q ss_pred cccchhhHHHHhhchhhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCch---hhhhHHHHHHHHHHHHHHHHHHHH
Q 048639 546 KRTTIFFRIWFCLNERELLRLVVGTVAAAFSGISKPLFGFFIITIGVAYYDPQ---AKQEVGWYSLAFSLVGLFSLFTHT 622 (1139)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 622 (1139)
.....++++ +++++|+|+++++|++++++.++..|++++.++.....++..+ .......|+++|++++++.++..+
T Consensus 647 ~~~~s~~~i-~k~~~pe~~~l~lG~i~a~i~G~~~P~fa~~~s~~~~~f~~~~~~~~~~~~~~~al~f~~l~~~~~i~~~ 725 (1228)
T KOG0055|consen 647 DEKVSFWRI-FKLNKPEWPYLLLGSLGAAIRGATYPLFAYVFSQVLEAFYPPDDDELKREVRAWALIFLGLGIVSGITNF 725 (1228)
T ss_pred cccccHHHH-HHhccchhHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 134567777 7778899999999999999999999999999999999887422 233344599999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccCCCChhHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 623 LQHYFFGVVGEKAMTNLRRTLYTGVLRNEIAWFEKPQNDAGSLTSRIVSDTSMVKAIISDRMSVIVQCISSILIATIVSL 702 (1139)
Q Consensus 623 ~~~~~~~~~~~~~~~~l~~~l~~~ll~~~~~ff~~~~~~~G~i~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~ 702 (1139)
+++|+|.+.++++..++|..+|+++++++++|||.++|+ |+|.+|+.+|...++..+.+.+..+++.+.+++++++++|
T Consensus 726 ~q~~~f~~~ge~Lt~R~R~~~F~~ll~qd~~wFD~~~ns-g~l~~RLa~Da~~vr~~v~~rl~~vv~~~~~~~~~iiiaf 804 (1228)
T KOG0055|consen 726 LQHYFFGIAGEKLTKRLRSMMFRALLRQEVGWFDDPENS-GALSSRLATDASNVRAAVGDRLSLVVQNIAAVIIGIIIAF 804 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccc-hHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHHHHHHhhcchHHHHhhcchHHHHHHHHHHHHHHHHHH
Q 048639 703 VVDWRMALVAWAVMPCHFIGGLIQAKSAQGFSGDSAAAHTEFISLTSESASNIRTVASFCHEENILQKAKISLEKTKRSS 782 (1139)
Q Consensus 703 ~~~~~l~lv~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~ 782 (1139)
+++|+++++++++.|++++..+.+.+++....++.+....+......|++++++||++|+.|+++.+.|.+.++...+..
T Consensus 805 ~~~W~lalv~la~~Pll~~~~~~~~~~~~~~~~~~~~~~~ea~~iA~eai~NIrTV~al~~e~~~~~~y~~~l~~p~~~~ 884 (1228)
T KOG0055|consen 805 IYGWRLALVVLATFPLLILSGYLQKKFLKGFSKDDKKAYEEASKIAIEAVSNIRTVAALCAEEKFMELYKEELEKPRKSS 884 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 783 RKESIKYGVIQGFSLCLWNIAHAVALWYTAVLIDKKQATFRDGIRAYQIFSLTVPSITELWTLIPTVISAITVLAPAFEI 862 (1139)
Q Consensus 783 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~ 862 (1139)
.++..+.+..+++.+.+.++.+++++|||.+++..|.+++.+++.+++.+.+....+.+...+.|++.++..++.+++++
T Consensus 885 ~~~~~i~gl~f~~sqs~~~~~~A~~f~~G~~Li~~g~~~~~~~~~vf~~l~~ta~~~~~~~s~~Pd~~ka~~Aa~~iF~i 964 (1228)
T KOG0055|consen 885 FKRGLISGLGFGFSQSLLFFVYALSFWYGARLISNGEMTFEDVFRVFMALSFTAMALGQASSYAPDISKAKIAAGSIFEI 964 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCCCCCCCCCCccccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCc
Q 048639 863 LDRKTEIEPDAPESSESGRIKGRIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNE 942 (1139)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~~~g~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~ 942 (1139)
++++|+.+++.+.+...++.+|+|+|+||+|+||+||+.+||+|+||+|++||++||||||||||||++.+|.|||+|.+
T Consensus 965 ~dr~~~i~~~~~~~~~~~~~~G~I~~~~V~F~YPsRP~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~LLeRfYdp~~ 1044 (1228)
T KOG0055|consen 965 LDRKPTIDPDSTSGGKLPNVKGDIEFRNVSFAYPTRPDVPVLNNLSLSIRAGQTVALVGPSGSGKSTVISLLERFYDPDA 1044 (1228)
T ss_pred hcCCCCCCCCCCCCCccccceeEEEEeeeEeeCCCCCCchhhcCCcEEecCCCEEEEECCCCCCHHHHHHHHHHhcCCCC
Confidence 99999777654344445567899999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEECCcccCCCChHHHhhhceEEccccccccccHHHHhccCCCcCCHHHHHHHHHHcCchHHHhhCCCCccccccCCC
Q 048639 943 GIILIDGKGIKEYNLRRLRSQIGLVQQEPLLFSCSIRNNICYGNEAASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKG 1022 (1139)
Q Consensus 943 G~I~idG~di~~~~l~~lR~~i~~V~Qdp~LF~gTIreNL~~~~~~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G 1022 (1139)
|.|.|||+||+++++++||++|++|+|||.||++||||||.||.++++++||.+|++.+++|+||.+||+||||+|||+|
T Consensus 1045 G~V~IDg~dik~lnl~~LR~~i~lVsQEP~LF~~TIrENI~YG~~~vs~~eIi~Aak~ANaH~FI~sLP~GyDT~vGerG 1124 (1228)
T KOG0055|consen 1045 GKVKIDGVDIKDLNLKWLRKQIGLVSQEPVLFNGTIRENIAYGSEEVSEEEIIEAAKLANAHNFISSLPQGYDTRVGERG 1124 (1228)
T ss_pred CeEEECCcccccCCHHHHHHhcceeccCchhhcccHHHHHhccCCCCCHHHHHHHHHHhhhHHHHhcCcCcccCccCccc
Confidence 99999999999999999999999999999999999999999996568999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhcCCEE
Q 048639 1023 CQLSGGQKQRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVINSDVI 1102 (1139)
Q Consensus 1023 ~~LSgGQrQrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~~DrI 1102 (1139)
.+||||||||||||||++||||||||||||||||.++|+.||++|++.. .++| +|+|||||+||++||.|
T Consensus 1125 ~QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~---------~gRT-~IvIAHRLSTIqnaD~I 1194 (1228)
T KOG0055|consen 1125 VQLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAM---------EGRT-TIVIAHRLSTIQNADVI 1194 (1228)
T ss_pred CcCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhh---------cCCc-EEEEecchhhhhcCCEE
Confidence 9999999999999999999999999999999999999999999999876 4555 89999999999999999
Q ss_pred EEEeCCEEEEecChhHHhhccCChHHHHHHHHhh
Q 048639 1103 VVMDKGEVVEMGSHSTLVAESQGVYSRLYQLQAF 1136 (1139)
Q Consensus 1103 ~vl~~G~ive~G~~~eLl~~~~g~f~~l~~~~~~ 1136 (1139)
+|+++|+|+|+|||++|+++ +|.|++|++.|..
T Consensus 1195 ~Vi~~G~VvE~GtH~~L~~~-~G~Y~~Lv~~q~~ 1227 (1228)
T KOG0055|consen 1195 AVLKNGKVVEQGTHDELLAK-RGIYFRLVQLQSS 1227 (1228)
T ss_pred EEEECCEEEecccHHHHHhC-CCchHHHhhhccC
Confidence 99999999999999999985 9999999998853
No 2
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=5.5e-175 Score=1623.32 Aligned_cols=1076 Identities=24% Similarity=0.327 Sum_probs=861.8
Q ss_pred HcCCcccccccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hHhHHHHHHHHHHHHHHHHHHHHHH
Q 048639 21 IGGEVGAFDTDLSTGKVITGVSSHMSVIRDAIGEKLGHFLSSFATFFSGVLIAV-ICCWEVSLLIFLVVPMILVIGATYT 99 (1139)
Q Consensus 21 l~~~~~~f~~~~~~G~l~~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~l~l~~l~~~~~~~~~~~~~~ 99 (1139)
|+..-..-... ++|+++|.|++|++++.++... +..++..++.++.++.+++ .++| -++++++++.+++++..+++
T Consensus 286 L~ls~~~~~~~-t~G~ivNlms~D~~ri~~~~~~-~h~~w~~Plqi~~~l~lLy~~LG~-sa~~G~~~~il~~p~n~~~a 362 (1381)
T KOG0054|consen 286 LRLSNSARGET-TVGEIVNLMSVDAQRLSDAACF-LHLLWSAPLQIILALYLLYGLLGP-SALAGVAVMVLLIPLNSFLA 362 (1381)
T ss_pred hcCchhhccCC-CcchhhhhhhhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhCh-HHHHHHHHHHHHHHHHHHHH
Confidence 55555444444 7899999999999999998754 3344444444444433333 2334 46777788888889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 100 KRMNAVSATKLLYLSEATSMIEQTISQIKTVFAFVGERSEIKSFSDCMDKQIIISRGEALIKGVGLGMFQSVTFCCWALI 179 (1139)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (1139)
++.++.+++.++..|++.+.++|.++|||+||+|+||+.|.++.++.++++.+..++..++.++...+......++.++
T Consensus 363 ~~~~~~q~~~m~~~D~Rik~~nEiL~~IkviK~yaWE~~F~~~I~~~R~~El~~lrk~~~~~~~~~~~~~~~p~lv~~~- 441 (1381)
T KOG0054|consen 363 KKIAKFQKRLMKRKDERIKLMNEILNGIKVIKLYAWEKPFLKKIEDLRQKELKLLRKSAYLSALNSFLNFFSPVLVSVV- 441 (1381)
T ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHhhhHhhhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 9999999999999999999999999999999999999999999999999999999999999888877776655544433
Q ss_pred HHHHHHH-HHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccCCCCccccCCCccEE
Q 048639 180 IWVGAVV-VTAKRSTGGEVLAAVMSILFGAIALTYAAPDMQVFNQAKAAGFEIFQVIQRKPRISYSSKGKELEKIDGNID 258 (1139)
Q Consensus 180 ~~~g~~~-v~~~~l~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~~~~~~~~~~i~ 258 (1139)
.+++|. ..++.+++..+|+.+.++..+..|+..++..+..+.++.+|.+|+.+++..++............+.+..++
T Consensus 442 -tF~~~v~~~~~~lt~~~aF~slalfniLr~pl~~~P~~i~~~vqa~VS~~Ri~~fl~~~e~~~~~~~~~~~~~~~~~i~ 520 (1381)
T KOG0054|consen 442 -TFVVFVLLLGNLLTASTAFTSLALFNILRFPLFMLPSVISQLVQAKVSLKRLKEFLLSEELDPDSVERSPDEAGENAIE 520 (1381)
T ss_pred -HHHHHhhccCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCccccccCCCCCCCceEE
Confidence 345555 557789999999999999999999999999999999999999999999986544322211112223345799
Q ss_pred EEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcceEEE
Q 048639 259 IRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNIGAV 338 (1139)
Q Consensus 259 ~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v 338 (1139)
++|.+|+|++....+.|+||||+|++|+++|||||+|||||+|+.+|+|++++.+|++.++| .++||
T Consensus 521 i~~~sfsW~~~~~~~tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~AiLGEm~~~sG~v~v~g-------------siaYv 587 (1381)
T KOG0054|consen 521 IKNGSFSWDSESPEPTLKDINFEIKKGQLVAVVGPVGSGKSSLLSAILGEMPKLSGSVAVNG-------------SVAYV 587 (1381)
T ss_pred EeeeeEecCCCCCcccccceeEEecCCCEEEEECCCCCCHHHHHHHHhcCcccccceEEEcC-------------eEEEe
Confidence 99999999864445699999999999999999999999999999999999999999999998 59999
Q ss_pred ecCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHccCCCEEE
Q 048639 339 SQEPSLFTGSLMDNIKVGNMDADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVKNPPILL 418 (1139)
Q Consensus 339 ~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~~~~ill 418 (1139)
||+||+|++||||||+||.| .+.++..++.+.|+++++++.||.|+.|.|||+|.+|||||||||+||||+|+|+||+|
T Consensus 588 ~Q~pWI~ngTvreNILFG~~-~d~~rY~~Vi~aC~L~~Dle~Lp~GD~TeIGErGinLSGGQKqRIsLARAVY~~adIYL 666 (1381)
T KOG0054|consen 588 PQQPWIQNGTVRENILFGSP-YDEERYDKVIKACALKKDLEILPFGDLTEIGERGINLSGGQKQRISLARAVYQDADIYL 666 (1381)
T ss_pred ccccHhhCCcHHHhhhcCcc-ccHHHHHHHHHHccCHhHHhhcCCCCcceecCCccCCcHhHHHHHHHHHHHhccCCEEE
Confidence 99999999999999999986 45566666777777889999999999999999999999999999999999999999999
Q ss_pred EeCCCCCCCHHhHH-HHHHHHHHHcCCCeEEEEecCccchhccCEEEEEeCcEEEEecChhhhhccchHHHHHHhhccCC
Q 048639 419 LDEATSALDSESEK-LVQEALERAMQGRTVILIAHRMSTIVNADMIAVVEDGQVTETGTHHSLLQTSDFYNRLFTMQNLR 497 (1139)
Q Consensus 419 lDEpts~LD~~~~~-~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~ 497 (1139)
||||+||+|+|+.+ .+.++++...++||+|+|||+++++++||+|++|+||+|++.|+++|+++....+.++.......
T Consensus 667 LDDplSAVDahvg~~if~~ci~~~L~~KT~ILVTHql~~L~~ad~Iivl~~G~I~~~Gty~el~~~~~~~~~l~~~~~~~ 746 (1381)
T KOG0054|consen 667 LDDPLSAVDAHVGKHIFEECIRGLLRGKTVILVTHQLQFLPHADQIIVLKDGKIVESGTYEELLKSGGDFAELAHEEESE 746 (1381)
T ss_pred EcCcchhhhHhhhHHHHHHHHHhhhcCCEEEEEeCchhhhhhCCEEEEecCCeEecccCHHHHHhcchhHHHHhhccchh
Confidence 99999999999865 56678888889999999999999999999999999999999999999999888888874433322
Q ss_pred CCCCcCcccccccccccchhhhhhhcccCchhhhhhc---ccccchhhhcccccchhhHHHHhhchh--hHHHHHHHHHH
Q 048639 498 PIDDSRTKASTVESTSTEQQISVVEQLEEPEESKREL---SASTGQEEVKGKRTTIFFRIWFCLNER--ELLRLVVGTVA 572 (1139)
Q Consensus 498 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 572 (1139)
...+......+..+.................+...+. +....++++...+...+ ..|..|.+. ++....+.+++
T Consensus 747 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee~~~G~v~~-~vY~~Y~~a~~g~~~~~~~~~~ 825 (1381)
T KOG0054|consen 747 QEEEASEKDLESGESSRESESRSLESLSSEEEKSKDEKEEEDKLVQEEERETGKVSW-SVYKKYIKAAGGFLLVLLILLL 825 (1381)
T ss_pred hccccccccccccccccchhhhhhhhhcccccccccccchhhHHHHHHHHhcCEeeH-HHHHHHHHhcccHHHHHHHHHH
Confidence 1111000000000000000000000000000000000 00001111222333333 344444443 22222222333
Q ss_pred HHHHhhHHHHHHHHHHHHHHHhcCchhh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Q 048639 573 AAFSGISKPLFGFFIITIGVAYYDPQAK-QEVGWYSLAFSLVGLFSLFTHTLQHYFFGVVGEKAMTNLRRTLYTGVLRNE 651 (1139)
Q Consensus 573 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~~ 651 (1139)
......+.....+|+..|.+.-...... ....+|.++|++++++..++..++.+.+...+.+++++||++|+++++++|
T Consensus 826 ~v~~~~~~~~~~~WLs~W~~~~~~~~~~~~~~~~~~~vY~~l~~~~~~~~~~rs~~~~~~~l~aS~~Lh~~ml~~Ilrap 905 (1381)
T KOG0054|consen 826 FVLTQVLQIASNYWLSYWTDDGEDNGTTTVSTSFYLGVYALLGVASSLLTLLRSFLFAKGGLKASRKLHDKLLNSILRAP 905 (1381)
T ss_pred HHHHHHHHHHHHHHHHHhcCCcccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 3333333333444444333321111110 356689999999999999999999999999999999999999999999999
Q ss_pred CcccccCCCChhHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 048639 652 IAWFEKPQNDAGSLTSRIVSDTSMVKAIISDRMSVIVQCISSILIATIVSLVVDWRMALVAWAVMPCHFIGGLIQAKSAQ 731 (1139)
Q Consensus 652 ~~ff~~~~~~~G~i~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~~~~~p~~~~~~~~~~~~~~ 731 (1139)
|+||| .+|+|||+|||++|++.+|..+|..+..++..++.+++.++++.+..|++ +++++|+.+++++++.+|..
T Consensus 906 m~FFd--tTP~GRILNRFSkD~~~vD~~Lp~~~~~~~~~~~~~l~~~~vi~~~~P~f---li~~~pl~v~~~~~~~~Y~~ 980 (1381)
T KOG0054|consen 906 MSFFD--TTPTGRILNRFSKDIDTVDVLLPFTLEFFLQSLLNVLGILVVISYVTPWF---LIAIIPLGVIYYFVQRYYLA 980 (1381)
T ss_pred chhcC--CCCccchhhhcccchHHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHhHHH---HHHHHHHHHHHHHHHHHHHH
Confidence 99999 89999999999999999999999999999999999999999888887755 45556666666666665555
Q ss_pred chhhhHHHHH----HHHHHHHHHhhcchHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 732 GFSGDSAAAH----TEFISLTSESASNIRTVASFCHEENILQKAKISLEKTKRSSRKESIKYGVIQGFSLCLWNIAHAVA 807 (1139)
Q Consensus 732 ~~~~~~~~~~----~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 (1139)
. +|++++.+ ++.++|++|++.|+.|||||+.+++|.+++...+|.+.+..... .....|.++..-+...+.++.
T Consensus 981 t-sReLkRLesitRSPi~sh~~Etl~GlsTIRAf~~~~rf~~~~~~~~D~~~~~~f~~-~~a~RWla~Rle~ig~~~v~~ 1058 (1381)
T KOG0054|consen 981 T-SRELKRLESITRSPIYSHFSETLQGLSTIRAFGKEERFIQENDELIDENSRAFFLS-ISANRWLAVRLELLGNLVVLI 1058 (1381)
T ss_pred H-hHHHHHhhhcccchHHHhHHHHhcCcceeeeccccHHHHHHHHHHhhhhHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 3 77777765 56799999999999999999999999999999999999875543 334455555554443333333
Q ss_pred HHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCC--CCCCCCcccc
Q 048639 808 LWYTAVLIDKKQATFRDGIRAYQIFSLTVPSITELWTLIPTVISAITVLAPAFEILDRKTEIEPDAPE--SSESGRIKGR 885 (1139)
Q Consensus 808 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~--~~~~~~~~g~ 885 (1139)
..+.+.+...+..++|.+..++.+.......+..++....++++.++++||+.+|.+.++|.+...+. .++.++.+|.
T Consensus 1059 ~al~~vl~~~~~~~~g~vGLslsyal~lt~~l~~~vR~~~elEn~m~SVERv~eY~~~~~E~p~~~~~~~pp~~WP~~G~ 1138 (1381)
T KOG0054|consen 1059 AALFAVLLPSGLISPGLVGLSLSYALQLTGLLQWLVRQSSELENNMVSVERVLEYTDIPSEAPLEIEESRPPPSWPSKGE 1138 (1381)
T ss_pred HHHHHHHccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhHHHHHhcCCCCCCCCCcCCCCCCCCCCCCe
Confidence 33333333333366787777777777777888889999999999999999999999987773222212 2444678999
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhce
Q 048639 886 IEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQIG 965 (1139)
Q Consensus 886 I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~ 965 (1139)
|+|+|++.+|... .++||+||||+|+||||||||||||||||||+++|+|+.||.+|+|.|||+||+++++++||++++
T Consensus 1139 I~f~~~~~RYrp~-lp~VLk~is~~I~p~eKVGIVGRTGaGKSSL~~aLFRl~e~~~G~I~IDgvdI~~igL~dLRsrls 1217 (1381)
T KOG0054|consen 1139 IEFEDLSLRYRPN-LPLVLKGISFTIKPGEKVGIVGRTGAGKSSLILALFRLVEPAEGEILIDGVDISKIGLHDLRSRLS 1217 (1381)
T ss_pred EEEEEeEEEeCCC-CcchhcCceEEEcCCceEEEeCCCCCCHHHHHHHHHHhcCccCCeEEEcCeecccccHHHHHhcCe
Confidence 9999999999643 347999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEccccccccccHHHHhccCCCcCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhcCCCCE
Q 048639 966 LVQQEPLLFSCSIRNNICYGNEAASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIARTLLKRPAI 1045 (1139)
Q Consensus 966 ~V~Qdp~LF~gTIreNL~~~~~~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalARALlr~p~I 1045 (1139)
+|||||+||+||+|+||||.+ +++|++||+|||+|+|+++|.++|+|||++|.|+|.|||.||||++||||||||++||
T Consensus 1218 IIPQdPvLFsGTvR~NLDPf~-e~sD~~IW~ALe~~~Lk~~v~~~p~~Ld~~v~egG~N~SvGQRQLlCLARALLr~skI 1296 (1381)
T KOG0054|consen 1218 IIPQDPVLFSGTVRFNLDPFD-EYSDDEIWEALERCQLKDVVSSLPGGLDSEVSEGGENFSVGQRQLLCLARALLRKSKI 1296 (1381)
T ss_pred eeCCCCceecCccccccCccc-ccCHHHHHHHHHHhChHHHHhhCCcCCCceecCCCccCChHHHHHHHHHHHHhccCCE
Confidence 999999999999999999985 7999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhcCCEEEEEeCCEEEEecChhHHhhccCC
Q 048639 1046 MLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVINSDVIVVMDKGEVVEMGSHSTLVAESQG 1125 (1139)
Q Consensus 1046 LlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~~DrI~vl~~G~ive~G~~~eLl~~~~g 1125 (1139)
|+||||||++|++||..||++||+.| ++|| ||+||||++||+|||||+|||+|+|+|+|+|++|++++++
T Consensus 1297 LvLDEATAsVD~~TD~lIQ~tIR~~F---------~dcT-VltIAHRl~TVmd~DrVlVld~G~v~EfdsP~~Ll~~~~S 1366 (1381)
T KOG0054|consen 1297 LVLDEATASVDPETDALIQKTIREEF---------KDCT-VLTIAHRLNTVMDSDRVLVLDAGRVVEFDSPAELLSDKDS 1366 (1381)
T ss_pred EEEecccccCChHHHHHHHHHHHHHh---------cCCe-EEEEeeccchhhhcCeEEEeeCCeEeecCChHHHHhCCcc
Confidence 99999999999999999999999998 7777 9999999999999999999999999999999999999899
Q ss_pred hHHHHHHHHh
Q 048639 1126 VYSRLYQLQA 1135 (1139)
Q Consensus 1126 ~f~~l~~~~~ 1135 (1139)
.|++++.+..
T Consensus 1367 ~f~~~l~~~~ 1376 (1381)
T KOG0054|consen 1367 LFSSLLKEAA 1376 (1381)
T ss_pred hHHHHHHHHH
Confidence 9987776544
No 3
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=5e-164 Score=1604.12 Aligned_cols=1120 Identities=30% Similarity=0.490 Sum_probs=939.2
Q ss_pred HHHHHHHHHHHHHHHHH---------HcCCcccccccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 4 VKLILSWHPKGNRVLMK---------IGGEVGAFDTDLSTGKVITGVSSHMSVIRDAIGEKLGHFLSSFATFFSGVLIAV 74 (1139)
Q Consensus 4 ~~~~~~~~~~~~~~~~~---------l~~~~~~f~~~~~~G~l~~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~ 74 (1139)
....+||.++++++.++ +++|++|||.. ++|++++++++|++.+++.+...+..++..+++++++++++|
T Consensus 115 ~~~~~~~~~~~~~~~~~lR~~~~~~ll~~~~~~fd~~-~~~~l~s~l~~d~~~i~~~i~~~~~~~~~~~~~~i~~~i~~~ 193 (1466)
T PTZ00265 115 FISSFCMDVVTTKILKTLKLEFLKSVFYQDGQFHDNN-PGSKLTSDLDFYLEQVNAGIGTKFITIFTYASAFLGLYIWSL 193 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHcCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34567889999999888 88999999997 789999999999999999999999999999999999999999
Q ss_pred hHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHH
Q 048639 75 ICCWEVSLLIFLVVPMILVIGATYTKRMNAVSATKLLYLSEATSMIEQTISQIKTVFAFVGERSEIKSFSDCMDKQIIIS 154 (1139)
Q Consensus 75 ~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~ 154 (1139)
+++|.+++++++++|+++++..++.+++++..++.++..++..+.+.|.++|+++||+|+.|+.+.++|.+..+...+..
T Consensus 194 ~~sw~Lalv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~f~~~~~~~~~~~ 273 (1466)
T PTZ00265 194 FKNARLTLCITCVFPLIYICGVICNKKVKINKKTSLLYNNNTMSIIEEALVGIRTVVSYCGEKTILKKFNLSEKLYSKYI 273 (1466)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhccCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999989888888899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 155 RGEALIKGVGLGMFQSVTFCCWALIIWVGAVVVTAK--------RSTGGEVLAAVMSILFGAIALTYAAPDMQVFNQAKA 226 (1139)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~--------~l~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 226 (1139)
.+...+.++..++..++.++.+++++|+|++++.+| .+++|.+++++++.+.....+..+.+.+..++.+.+
T Consensus 274 ~k~~~~~~~~~~~~~~~~~~~~~l~~~~G~~lv~~g~~~~~~~~~~t~g~v~~~~~~~l~~~~~l~~i~~~~~~~~~a~~ 353 (1466)
T PTZ00265 274 LKANFMESLHIGMINGFILASYAFGFWYGTRIIISDLSNQQPNNDFHGGSVISILLGVLISMFMLTIILPNITEYMKSLE 353 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999998888888888889999999999999875 578999998877777666677777888899999999
Q ss_pred HHHHHHHHhccCCCCccCCCCccccCCCccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHH
Q 048639 227 AGFEIFQVIQRKPRISYSSKGKELEKIDGNIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVA 306 (1139)
Q Consensus 227 ~~~ri~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~ 306 (1139)
+++|++++++.+++......+...+.. ..|+++||+|+|+++++.++|+|+||+|++||++|||||||||||||+++|+
T Consensus 354 a~~ri~~ii~~~~~~~~~~~~~~~~~~-~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~ 432 (1466)
T PTZ00265 354 ATNSLYEIINRKPLVENNDDGKKLKDI-KKIQFKNVRFHYDTRKDVEIYKDLNFTLTEGKTYAFVGESGCGKSTILKLIE 432 (1466)
T ss_pred HHHHHHHHHcCCCCCCCCCCCccCCCC-CcEEEEEEEEEcCCCCCCceeccceEEEcCCCEEEEECCCCCCHHHHHHHHH
Confidence 999999999876654221111111222 3799999999998654457999999999999999999999999999999999
Q ss_pred hccCCCccEEEE-CCccCCCCCHHHHhcceEEEecCCCCCcccHHHHHhcCCC---------------------------
Q 048639 307 RFYDPSNGDILI-DSLNIKDLDLKSLRKNIGAVSQEPSLFTGSLMDNIKVGNM--------------------------- 358 (1139)
Q Consensus 307 g~~~~~~G~i~~-~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~--------------------------- 358 (1139)
|+|+|++|+|.+ ||.++.+++.+++|++||||+|+|.||++||+|||.+|.+
T Consensus 433 gl~~p~~G~I~i~~g~~i~~~~~~~lr~~Ig~V~Q~~~LF~~TI~eNI~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (1466)
T PTZ00265 433 RLYDPTEGDIIINDSHNLKDINLKWWRSKIGVVSQDPLLFSNSIKNNIKYSLYSLKDLEALSNYYNEDGNDSQENKNKRN 512 (1466)
T ss_pred HhccCCCCeEEEeCCcchhhCCHHHHHHhccEecccccchhccHHHHHHhcCCCccccchhccccccccccccccccccc
Confidence 999999999999 5799999999999999999999999999999999999742
Q ss_pred ------------------------------CCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHH
Q 048639 359 ------------------------------DADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIAR 408 (1139)
Q Consensus 359 ------------------------------~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lAR 408 (1139)
+.+++++.++++.+++++++.++|+|++|.+|++|.+|||||||||+|||
T Consensus 513 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~a~~~~~l~~~i~~lp~g~dT~vg~~g~~LSGGQkQRiaIAR 592 (1466)
T PTZ00265 513 SCRAKCAGDLNDMSNTTDSNELIEMRKNYQTIKDSEVVDVSKKVLIHDFVSALPDKYETLVGSNASKLSGGQKQRISIAR 592 (1466)
T ss_pred cccccccchhhhcccccchhhhhhcccccccCCHHHHHHHHHHhCcHHHHHhCccccCceeCCCCCcCCHHHHHHHHHHH
Confidence 24568899999999999999999999999999999999999999999999
Q ss_pred HHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCCeEEEEecCccchhccCEEEEEeCc-----------------
Q 048639 409 AIVKNPPILLLDEATSALDSESEKLVQEALERAM--QGRTVILIAHRMSTIVNADMIAVVEDG----------------- 469 (1139)
Q Consensus 409 al~~~~~illlDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~~~~~~~~d~i~~l~~G----------------- 469 (1139)
||+++|+|||||||||+||+++++.+++.|+++. +|+|+|+||||+++++.||+|++|++|
T Consensus 593 All~~P~ILlLDEpTSaLD~~se~~i~~~L~~~~~~~g~TvIiIsHrls~i~~aD~Iivl~~g~~g~~~~~~~~~~~~~~ 672 (1466)
T PTZ00265 593 AIIRNPKILILDEATSSLDNKSEYLVQKTINNLKGNENRITIIIAHRLSTIRYANTIFVLSNRERGSTVDVDIIGEDPTK 672 (1466)
T ss_pred HHhcCCCEEEEeCcccccCHHHHHHHHHHHHHHhhcCCCEEEEEeCCHHHHHhCCEEEEEeCCccccccccccccccccc
Confidence 9999999999999999999999999999999875 489999999999999889999999986
Q ss_pred ------------------------------EEEEecChhhhhc-cchHHHHHHhhccCCCCCCc-C--cccc--cccccc
Q 048639 470 ------------------------------QVTETGTHHSLLQ-TSDFYNRLFTMQNLRPIDDS-R--TKAS--TVESTS 513 (1139)
Q Consensus 470 ------------------------------~i~~~g~~~~l~~-~~~~~~~~~~~~~~~~~~~~-~--~~~~--~~~~~~ 513 (1139)
+|+|+|+|+||++ .++.|..+...|........ . .... ......
T Consensus 673 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ive~Gth~~L~~~~~g~y~~l~~~q~~~~~~~~~~~~~~~~~~~~~~~~ 752 (1466)
T PTZ00265 673 DNKENNNKNNKDDNNNNNNNNNNKINNAGSYIIEQGTHDALMKNKNGIYYTMINNQKVSSKKSSNNDNDKDSDMKSSAYK 752 (1466)
T ss_pred cccccccccccccccccccccccccccCCceeEeeCCHHHHHhccCCcHHHHHhhhcccccccccccccccccccccccc
Confidence 5999999999998 68999999977654321110 0 0000 000000
Q ss_pred cch-hh--hhh-----hcccCch-hhhhhcc-cc-cchhhh------------cccccchhhHHHHhhchhhHHHHHHHH
Q 048639 514 TEQ-QI--SVV-----EQLEEPE-ESKRELS-AS-TGQEEV------------KGKRTTIFFRIWFCLNERELLRLVVGT 570 (1139)
Q Consensus 514 ~~~-~~--~~~-----~~~~~~~-~~~~~~~-~~-~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 570 (1139)
... .. ... ....... ....... .. .+..+. ..+......++ +++..+.+..+++++
T Consensus 753 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 831 (1466)
T PTZ00265 753 DSERGYDPDEMNGNSKHENESASNKKSCKMSDENASENNAGGKLPFLRNLFKRKPKAPNNLRIV-YREIFSYKKDVTIIA 831 (1466)
T ss_pred ccccccccccccccccccccccccccccccccccccchhccccchhhhhccccccccchhHHHH-HHHHHHHHHHHHHHH
Confidence 000 00 000 0000000 0000000 00 000000 00011112222 222333344467777
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHHhcCc-hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 048639 571 VAAAFSGISKPLFGFFIITIGVAYYDP-QAKQEVGWYSLAFSLVGLFSLFTHTLQHYFFGVVGEKAMTNLRRTLYTGVLR 649 (1139)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~ 649 (1139)
+++++.+++.|.++++++.+++..+.. ........|++++++++++..++.+++.+++.+.++++..++|.++|+++++
T Consensus 832 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~l~~~~~~~~~~~~~~~lR~~lf~~ll~ 911 (1466)
T PTZ00265 832 LSILVAGGLYPVFALLYAKYVSTLFDFANLEANSNKYSLYILVIAIAMFISETLKNYYNNVIGEKVEKTMKRRLFENILY 911 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 788888999999999999988866542 1222345677888888889999999999999999999999999999999999
Q ss_pred CCCcccccCCCChhHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHh
Q 048639 650 NEIAWFEKPQNDAGSLTSRIVSDTSMVKAIISDRMSVIVQCISSILIATIVSLVVDWRMALVAWAVMPCHFIGGLIQAKS 729 (1139)
Q Consensus 650 ~~~~ff~~~~~~~G~i~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~~~~~p~~~~~~~~~~~~ 729 (1139)
+|++|||++.+++|++++|+++|++.++..+...+..++..++.++++++++++++|.+++++++++|++........+.
T Consensus 912 ~~~~~fd~~~~~~G~l~srl~~Dv~~l~~~~~~~l~~~~~~i~~~i~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~ 991 (1466)
T PTZ00265 912 QEISFFDQDKHAPGLLSAHINRDVHLLKTGLVNNIVIFTHFIVLFLVSMVMSFYFCPIVAAVLTGTYFIFMRVFAIRARL 991 (1466)
T ss_pred CCHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999997678999999999999999999999999999999999999999999999998887665544443332221111
Q ss_pred hh--chhhh-------------HHHHHHHHHHHHHHhhcchHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 730 AQ--GFSGD-------------SAAAHTEFISLTSESASNIRTVASFCHEENILQKAKISLEKTKRSSRKESIKYGVIQG 794 (1139)
Q Consensus 730 ~~--~~~~~-------------~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 794 (1139)
.. ...+. .++........+.|++.|+++||+|+.|+++.++|.+..+...+...+.....+.+.+
T Consensus 992 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1071 (1466)
T PTZ00265 992 TANKDVEKKEINQPGTVFAYNSDDEIFKDPSFLIQEAFYNMNTVIIYGLEDYFCNLIEKAIDYSNKGQKRKTLVNSMLWG 1071 (1466)
T ss_pred HHHHHHHhhhccccccccchhhhHHHHHHHHHHHHHHHhcHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 00000 1223455678999999999999999999999999999999998888888888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCC
Q 048639 795 FSLCLWNIAHAVALWYTAVLIDKKQATFRDGIRAYQIFSLTVPSITELWTLIPTVISAITVLAPAFEILDRKTEIEPDAP 874 (1139)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~ 874 (1139)
+.+.+..+..++++|+|++++..|.++++.++.++.++.+...++..+...++.+..+..+.+|++++++.+++.+..+.
T Consensus 1072 ~~~~~~~~~~~~~~~~G~~lv~~g~it~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~a~~a~~ri~~ll~~~~~~~~~~~ 1151 (1466)
T PTZ00265 1072 FSQSAQLFINSFAYWFGSFLIRRGTILVDDFMKSLFTFLFTGSYAGKLMSLKGDSENAKLSFEKYYPLIIRKSNIDVRDN 1151 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCcCCCCCC
Confidence 88888888999999999999999999999998887776666667788889999999999999999999987654322111
Q ss_pred CCCC---CCCccccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccC-----------
Q 048639 875 ESSE---SGRIKGRIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDP----------- 940 (1139)
Q Consensus 875 ~~~~---~~~~~g~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p----------- 940 (1139)
.... ++...|.|+|+||+|+||++|+.+||+|+||+|+|||++||||+||||||||+++|+|||+|
T Consensus 1152 ~~~~~~~~~~~~g~I~f~nVsF~Y~~~~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~ 1231 (1466)
T PTZ00265 1152 GGIRIKNKNDIKGKIEIMDVNFRYISRPNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNE 1231 (1466)
T ss_pred cccccccCCCCCceEEEEEEEEECCCCCCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCccccccccccc
Confidence 1111 12345789999999999977667899999999999999999999999999999999999999
Q ss_pred -------------------------------------------CccEEEECCcccCCCChHHHhhhceEEcccccccccc
Q 048639 941 -------------------------------------------NEGIILIDGKGIKEYNLRRLRSQIGLVQQEPLLFSCS 977 (1139)
Q Consensus 941 -------------------------------------------~~G~I~idG~di~~~~l~~lR~~i~~V~Qdp~LF~gT 977 (1139)
++|+|+|||+||+++++++||++|+||||||+||+||
T Consensus 1232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~LF~gT 1311 (1466)
T PTZ00265 1232 HTNDMTNEQDYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPMLFNMS 1311 (1466)
T ss_pred cccccccccccccccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCcccccc
Confidence 6999999999999999999999999999999999999
Q ss_pred HHHHhccCCCcCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhcCCCCEEEeeccccCCCH
Q 048639 978 IRNNICYGNEAASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIARTLLKRPAIMLLDEATSALDA 1057 (1139)
Q Consensus 978 IreNL~~~~~~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalARALlr~p~ILlLDEaTS~LD~ 1057 (1139)
|||||.+|.|+++|+++++|++.+++++||.+||+||||.|||+|.+|||||||||||||||+|+|+|||||||||+||+
T Consensus 1312 IreNI~~g~~~at~eeI~~A~k~A~l~~fI~~LP~GydT~VGe~G~~LSGGQkQRIaIARALlr~p~ILLLDEaTSaLD~ 1391 (1466)
T PTZ00265 1312 IYENIKFGKEDATREDVKRACKFAAIDEFIESLPNKYDTNVGPYGKSLSGGQKQRIAIARALLREPKILLLDEATSSLDS 1391 (1466)
T ss_pred HHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCccccCCccCCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCcccccCH
Confidence 99999999989999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhcCCEEEEEeC----CEEE-EecChhHHhhccCChHHHHHH
Q 048639 1058 ESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVINSDVIVVMDK----GEVV-EMGSHSTLVAESQGVYSRLYQ 1132 (1139)
Q Consensus 1058 ~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~~DrI~vl~~----G~iv-e~G~~~eLl~~~~g~f~~l~~ 1132 (1139)
+||+.|+++|++... .+++|+|+||||++++++||+|+||++ |+++ |.|+|+||+++++|.|++|++
T Consensus 1392 ~sE~~I~~~L~~~~~--------~~~~TvIiIaHRlsti~~aD~Ivvl~~~~~~G~iv~e~Gth~eLl~~~~g~Y~~l~~ 1463 (1466)
T PTZ00265 1392 NSEKLIEKTIVDIKD--------KADKTIITIAHRIASIKRSDKIVVFNNPDRTGSFVQAHGTHEELLSVQDGVYKKYVK 1463 (1466)
T ss_pred HHHHHHHHHHHHHhc--------cCCCEEEEEechHHHHHhCCEEEEEeCCCCCCCEEEEecCHHHHHhcCCChHHHHHh
Confidence 999999999997520 123459999999999999999999999 9954 999999999745899999998
Q ss_pred HH
Q 048639 1133 LQ 1134 (1139)
Q Consensus 1133 ~~ 1134 (1139)
.|
T Consensus 1464 ~~ 1465 (1466)
T PTZ00265 1464 LA 1465 (1466)
T ss_pred hc
Confidence 76
No 4
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=1.1e-158 Score=1568.05 Aligned_cols=1072 Identities=20% Similarity=0.282 Sum_probs=820.0
Q ss_pred HcCCcccccccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 21 IGGEVGAFDTDLSTGKVITGVSSHMSVIRDAIGEKLGHFLSSFATFFSGVLIAVICCWEVSLLIFLVVPMILVIGATYTK 100 (1139)
Q Consensus 21 l~~~~~~f~~~~~~G~l~~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~l~~l~~~~~~~~~~~~~~~ 100 (1139)
+++|..++... ++|+++|++++|++++++++. .+..++..++.+++++++++..-...++++++++++++++..++.+
T Consensus 385 L~l~~~~~~~~-~~G~ivnl~s~Dv~~i~~~~~-~l~~l~~~pl~ii~~~~lL~~~lg~~~l~g~~v~~l~~~l~~~~~~ 462 (1622)
T PLN03130 385 LRLTHEGRKKF-TSGKITNLMTTDAEALQQICQ-QLHTLWSAPFRIIIAMVLLYQQLGVASLIGSLMLVLMFPIQTFIIS 462 (1622)
T ss_pred hcCChhhcCCC-CHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888899886 899999999999999999874 4566666666655555544432222233444444555667778889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 101 RMNAVSATKLLYLSEATSMIEQTISQIKTVFAFVGERSEIKSFSDCMDKQIIISRGEALIKGVGLGMFQSVTFCCWALII 180 (1139)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (1139)
++++..++.++..+++.+.+.|.++|+++||+|+||+.+.+++.+.++++.+..++.....++...+..... ..+.++
T Consensus 463 ~~~~~~~~~~~~~d~r~~~~~E~L~gi~~IK~~~~E~~~~~~i~~~r~~e~~~~~~~~~~~~~~~~~~~~~~--~~v~~~ 540 (1622)
T PLN03130 463 KMQKLTKEGLQRTDKRIGLMNEVLAAMDTVKCYAWENSFQSKVQTVRDDELSWFRKAQLLSAFNSFILNSIP--VLVTVV 540 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHH
Confidence 999999999999999999999999999999999999999999999999988877777666665444433222 134456
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccCCCCccccCCCccEEEE
Q 048639 181 WVGAVVVTAKRSTGGEVLAAVMSILFGAIALTYAAPDMQVFNQAKAAGFEIFQVIQRKPRISYSSKGKELEKIDGNIDIR 260 (1139)
Q Consensus 181 ~~g~~~v~~~~l~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~~~~~~~~~~i~~~ 260 (1139)
++|++.+.+|.+|+|.+++++.++..+..|+..++..+..+.++.++++||.++++.++...... . ......+.|+++
T Consensus 541 ~fg~~~~~~g~Lt~g~vf~~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~~L~~~e~~~~~~-~-~~~~~~~~I~~~ 618 (1622)
T PLN03130 541 SFGVFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNLITQAVNANVSLKRLEELLLAEERVLLPN-P-PLEPGLPAISIK 618 (1622)
T ss_pred HHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccccC-C-cccCCCCceEEE
Confidence 78899999999999999999988888899999999999999999999999999997654321111 1 111112469999
Q ss_pred eEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCc-cEEEECCccCCCCCHHHHhcceEEEe
Q 048639 261 DVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSN-GDILIDSLNIKDLDLKSLRKNIGAVS 339 (1139)
Q Consensus 261 ~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~-G~i~~~g~~~~~~~~~~~~~~i~~v~ 339 (1139)
|++|+|++++++++|+|+||+|++||+++||||||||||||+++|+|+++|++ |+|.+ |++|+||+
T Consensus 619 nvsf~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~GG~I~l-------------~~~Iayv~ 685 (1622)
T PLN03130 619 NGYFSWDSKAERPTLSNINLDVPVGSLVAIVGSTGEGKTSLISAMLGELPPRSDASVVI-------------RGTVAYVP 685 (1622)
T ss_pred eeEEEccCCCCCceeeceeEEecCCCEEEEECCCCCCHHHHHHHHHHhhccCCCceEEE-------------cCeEEEEc
Confidence 99999985444679999999999999999999999999999999999999999 99986 45899999
Q ss_pred cCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHccCCCEEEE
Q 048639 340 QEPSLFTGSLMDNIKVGNMDADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVKNPPILLL 419 (1139)
Q Consensus 340 Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~~~~illl 419 (1139)
|+||||++||||||+||.| .+++++.++++.++++++++.||+|++|.+||+|.+|||||||||+||||+|++|+||||
T Consensus 686 Q~p~LfngTIreNI~fg~~-~d~e~y~~vl~a~~L~~di~~LP~Gd~T~IGe~G~~LSGGQKQRIaLARAly~~~~IlLL 764 (1622)
T PLN03130 686 QVSWIFNATVRDNILFGSP-FDPERYERAIDVTALQHDLDLLPGGDLTEIGERGVNISGGQKQRVSMARAVYSNSDVYIF 764 (1622)
T ss_pred CccccCCCCHHHHHhCCCc-ccHHHHHHHHHHhCcHHHHHhCCCcccccccCCCCCCCHHHHHHHHHHHHHhCCCCEEEE
Confidence 9999999999999999987 478899999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCCCHHhHHHH-HHHHHHHcCCCeEEEEecCccchhccCEEEEEeCcEEEEecChhhhhccchHHHHHHhhccCCC
Q 048639 420 DEATSALDSESEKLV-QEALERAMQGRTVILIAHRMSTIVNADMIAVVEDGQVTETGTHHSLLQTSDFYNRLFTMQNLRP 498 (1139)
Q Consensus 420 DEpts~LD~~~~~~i-~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~ 498 (1139)
||||||||+++++.+ .++++...+++|+|+|||+++.+..||+|++|++|+|+++|+|++++++.+.|.+++..+...+
T Consensus 765 DEptSALD~~~~~~I~~~~l~~~l~~kTvIlVTH~l~~l~~aD~Ii~L~~G~i~e~Gt~~eL~~~~~~~~~l~~~~~~~~ 844 (1622)
T PLN03130 765 DDPLSALDAHVGRQVFDKCIKDELRGKTRVLVTNQLHFLSQVDRIILVHEGMIKEEGTYEELSNNGPLFQKLMENAGKME 844 (1622)
T ss_pred CCCccccCHHHHHHHHHHHhhHHhcCCEEEEEECCHhHHHhCCEEEEEeCCEEEEeCCHHHHHhcchhHHHHHHhccccc
Confidence 999999999998876 4677777789999999999999999999999999999999999999988888988876543211
Q ss_pred CCCcCccccccc-ccccchhh-h-hhhcccCchhhhhh-cccccchhhhcccccchhhHHHHhhchh-h-HHHHHHHHHH
Q 048639 499 IDDSRTKASTVE-STSTEQQI-S-VVEQLEEPEESKRE-LSASTGQEEVKGKRTTIFFRIWFCLNER-E-LLRLVVGTVA 572 (1139)
Q Consensus 499 ~~~~~~~~~~~~-~~~~~~~~-~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~ 572 (1139)
............ ........ . .............+ ......+++....+... +..|..|.+. + ++.+++.+++
T Consensus 845 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~-~~vy~~Y~~~~g~~~~~~~~~~~ 923 (1622)
T PLN03130 845 EYVEENGEEEDDQTSSKPVANGNANNLKKDSSSKKKSKEGKSVLIKQEERETGVVS-WKVLERYKNALGGAWVVMILFLC 923 (1622)
T ss_pred ccccccccccccccccccccccccccccccccccccccccchhhhhHHHHhcCccC-HHHHHHHHHHhccHHHHHHHHHH
Confidence 110000000000 00000000 0 00000000000000 00000011111222223 3333444333 2 2222222222
Q ss_pred HHHHhhHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Q 048639 573 AAFSGISKPLFGFFIITIGVAYYDPQAKQEVGWYSLAFSLVGLFSLFTHTLQHYFFGVVGEKAMTNLRRTLYTGVLRNEI 652 (1139)
Q Consensus 573 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~~~ 652 (1139)
..+..+......+|+..|.+.... ......+|.++|++++++..++.+++.+++...+.+++.++|.+++++++++|+
T Consensus 924 ~~~~~~~~~~~~~wl~~w~~~~~~--~~~~~~~~~~i~~~l~~~~~i~~~~~~~~~~~~~~~~~~~L~~~l~~~ll~~p~ 1001 (1622)
T PLN03130 924 YVLTEVFRVSSSTWLSEWTDQGTP--KTHGPLFYNLIYALLSFGQVLVTLLNSYWLIMSSLYAAKRLHDAMLGSILRAPM 1001 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccc--CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCH
Confidence 222222222333444333322111 112245677788889999999999999999999999999999999999999999
Q ss_pred cccccCCCChhHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH---Hh
Q 048639 653 AWFEKPQNDAGSLTSRIVSDTSMVKAIISDRMSVIVQCISSILIATIVSLVVDWRMALVAWAVMPCHFIGGLIQA---KS 729 (1139)
Q Consensus 653 ~ff~~~~~~~G~i~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~~~~~p~~~~~~~~~~---~~ 729 (1139)
+||| .+|+|+++|||++|++.+|..++..+..++..++.+++.++++++++|...+ +++|+.+++..++. +.
T Consensus 1002 ~ffd--~~~~G~IlnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~~i~i~~~~~~~~~---~~~pl~~~~~~~~~~~~~~ 1076 (1622)
T PLN03130 1002 SFFH--TNPLGRIINRFAKDLGDIDRNVAVFVNMFLGQIFQLLSTFVLIGIVSTISLW---AIMPLLVLFYGAYLYYQST 1076 (1622)
T ss_pred HHhc--cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHH
Confidence 9999 7899999999999999999999999999999999988888888777764333 33444333333322 22
Q ss_pred hhchhhhHHHHHHHHHHHHHHhhcchHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 730 AQGFSGDSAAAHTEFISLTSESASNIRTVASFCHEENILQKAKISLEKTKRSSRKESIKYGVIQGFSLCLWNIAHAVALW 809 (1139)
Q Consensus 730 ~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 (1139)
.+...+......++..+++.|+++|++|||+|+.++++.+++.+..+...+....... ...|.++... .+..++.++
T Consensus 1077 ~r~~~r~~~~~~s~~~~~~~Etl~Gi~tIraf~~~~~f~~~~~~~~~~~~~~~~~~~~-~~~wl~~~l~--~~~~~~i~~ 1153 (1622)
T PLN03130 1077 AREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMAEINGRSMDNNIRFTLVNMS-SNRWLAIRLE--TLGGLMIWL 1153 (1622)
T ss_pred HHHHHHHHHHhcchHHHHHHHHhCCHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH--HHHHHHHHH
Confidence 2222333333446678999999999999999999999988888887776654433221 1222222211 111222222
Q ss_pred HHHHHHhcCC-CC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCC--CCCCCC
Q 048639 810 YTAVLIDKKQ-AT-----FRDGIRAYQIFSLTVPSITELWTLIPTVISAITVLAPAFEILDRKTEIEPDAPE--SSESGR 881 (1139)
Q Consensus 810 ~~~~l~~~~~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~--~~~~~~ 881 (1139)
.+...+..+. .. .+.+...+.+.......+..+...+..++..+.+++|+.++++.++|.+...+. ..+.++
T Consensus 1154 ~~~~~v~~~~~~~~~~~~~~~~G~~ls~~~~~~~~l~~l~~~~~~~e~~~~sveRi~e~~~~~~E~~~~~~~~~~~~~wp 1233 (1622)
T PLN03130 1154 TASFAVMQNGRAENQAAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGTYIDLPSEAPLVIENNRPPPGWP 1233 (1622)
T ss_pred HHHHHHHcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccccccCCCCCCCCC
Confidence 2223233321 11 122222233333444555666677778899999999999999876654321111 111234
Q ss_pred ccccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHh
Q 048639 882 IKGRIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLR 961 (1139)
Q Consensus 882 ~~g~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR 961 (1139)
.+|.|+|+||+|+|+++ .++||+|+||+|+|||+||||||||||||||+++|+|+|+|++|+|+|||+||++++++++|
T Consensus 1234 ~~g~I~f~nVsf~Y~~~-~~~VL~~is~~I~~GekVaIVGrSGSGKSTLl~lL~rl~~p~~G~I~IDG~dI~~i~l~~LR 1312 (1622)
T PLN03130 1234 SSGSIKFEDVVLRYRPE-LPPVLHGLSFEISPSEKVGIVGRTGAGKSSMLNALFRIVELERGRILIDGCDISKFGLMDLR 1312 (1622)
T ss_pred CCCcEEEEEEEEEeCCC-CCceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCEecccCCHHHHH
Confidence 56899999999999632 24799999999999999999999999999999999999999999999999999999999999
Q ss_pred hhceEEccccccccccHHHHhccCCCcCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhcC
Q 048639 962 SQIGLVQQEPLLFSCSIRNNICYGNEAASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIARTLLK 1041 (1139)
Q Consensus 962 ~~i~~V~Qdp~LF~gTIreNL~~~~~~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalARALlr 1041 (1139)
++|++|||||+||+||||+||+|++ +++|+|+|+||++++++++|.++|+||||+|||+|.+|||||||||||||||+|
T Consensus 1313 ~~IsiVpQdp~LF~GTIreNLd~~~-~~tdeei~~Al~~a~l~~~I~~lp~GLdt~Vge~G~nLSgGQrQrlaLARALLr 1391 (1622)
T PLN03130 1313 KVLGIIPQAPVLFSGTVRFNLDPFN-EHNDADLWESLERAHLKDVIRRNSLGLDAEVSEAGENFSVGQRQLLSLARALLR 1391 (1622)
T ss_pred hccEEECCCCccccccHHHHhCcCC-CCCHHHHHHHHHHcCcHHHHHhCccccCccccCCCCCCCHHHHHHHHHHHHHHc
Confidence 9999999999999999999999986 689999999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhcCCEEEEEeCCEEEEecChhHHhh
Q 048639 1042 RPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVINSDVIVVMDKGEVVEMGSHSTLVA 1121 (1139)
Q Consensus 1042 ~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~~DrI~vl~~G~ive~G~~~eLl~ 1121 (1139)
+|+|||||||||+||++||+.||++|++.+ ++|| +|+||||++|+++||||+|||+|+|+|+|+|+||++
T Consensus 1392 ~p~ILILDEATSaLD~~Te~~Iq~~I~~~~---------~~~T-vI~IAHRL~tI~~~DrIlVLd~G~IvE~Gt~~eLl~ 1461 (1622)
T PLN03130 1392 RSKILVLDEATAAVDVRTDALIQKTIREEF---------KSCT-MLIIAHRLNTIIDCDRILVLDAGRVVEFDTPENLLS 1461 (1622)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHHHHC---------CCCE-EEEEeCChHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 999999999999999999999999999876 5555 999999999999999999999999999999999998
Q ss_pred ccCChHHHHHHHHh
Q 048639 1122 ESQGVYSRLYQLQA 1135 (1139)
Q Consensus 1122 ~~~g~f~~l~~~~~ 1135 (1139)
+++|.|++|++.+.
T Consensus 1462 ~~~g~f~~L~~~~~ 1475 (1622)
T PLN03130 1462 NEGSAFSKMVQSTG 1475 (1622)
T ss_pred CCCCHHHHHHHHcC
Confidence 76799999997654
No 5
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=2.1e-157 Score=1559.02 Aligned_cols=1071 Identities=19% Similarity=0.288 Sum_probs=817.6
Q ss_pred HcCCcccccccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHH---HHHHHHHHHHHHHHH
Q 048639 21 IGGEVGAFDTDLSTGKVITGVSSHMSVIRDAIGEKLGHFLSSFATFFSGVLIAVICCWEVSL---LIFLVVPMILVIGAT 97 (1139)
Q Consensus 21 l~~~~~~f~~~~~~G~l~~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~l---~~l~~~~~~~~~~~~ 97 (1139)
++.|..++++. ++|+++|++++|++.+++.+ ..+..++..++.+++++++++ +.+++ ++++++++++++..+
T Consensus 385 l~l~~~~~~~~-~~G~i~n~ls~Dv~~i~~~~-~~l~~l~~~p~~ii~~~~~l~---~~lg~~~l~~~~v~~l~~pl~~~ 459 (1495)
T PLN03232 385 LRLTHEARKNF-ASGKVTNMITTDANALQQIA-EQLHGLWSAPFRIIVSMVLLY---QQLGVASLFGSLILFLLIPLQTL 459 (1495)
T ss_pred hcCChhhcCCC-CHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH---HHHhHHHHHHHHHHHHHHHHHHH
Confidence 78888888886 89999999999999999986 445555555555444443332 22222 222233344456778
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 98 YTKRMNAVSATKLLYLSEATSMIEQTISQIKTVFAFVGERSEIKSFSDCMDKQIIISRGEALIKGVGLGMFQSVTFCCWA 177 (1139)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (1139)
+.++.++..++.++..+++.+.+.|.++||++||+|+||+.+.+++++.++++.+...+.....++...+..... ..+
T Consensus 460 ~~~~~~~~~~~~~~~~d~r~~~~~E~l~gi~~IK~~~~e~~~~~~~~~~r~~e~~~~~~~~~~~~~~~~~~~~~~--~~~ 537 (1495)
T PLN03232 460 IVRKMRKLTKEGLQWTDKRVGIINEILASMDTVKCYAWEKSFESRIQGIRNEELSWFRKAQLLSAFNSFILNSIP--VVV 537 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHH
Confidence 889999999999999999999999999999999999999999999999999998888877766655443332222 223
Q ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccCCCCccccCCCccE
Q 048639 178 LIIWVGAVVVTAKRSTGGEVLAAVMSILFGAIALTYAAPDMQVFNQAKAAGFEIFQVIQRKPRISYSSKGKELEKIDGNI 257 (1139)
Q Consensus 178 ~~~~~g~~~v~~~~l~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~~~~~~~~~~i 257 (1139)
.++++|++.+.+|.+|+|.+++++.++..+..|+..++..+..+.++.++.+||.++++.+++..... .......+.|
T Consensus 538 ~~~~fg~~~v~~~~lt~g~vf~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~L~~~~~~~~~~--~~~~~~~~~I 615 (1495)
T PLN03232 538 TLVSFGVFVLLGGDLTPARAFTSLSLFAVLRSPLNMLPNLLSQVVNANVSLQRIEELLLSEERILAQN--PPLQPGAPAI 615 (1495)
T ss_pred HHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccccc--CCcCCCCCcE
Confidence 34678999999999999999999999999999999999999999999999999999998654321111 1111123469
Q ss_pred EEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcceEE
Q 048639 258 DIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNIGA 337 (1139)
Q Consensus 258 ~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 337 (1139)
+++|++|+|++++++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|.+. .+|++|+|
T Consensus 616 ~~~~vsF~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~G~i~------------~~~~~Iay 683 (1495)
T PLN03232 616 SIKNGYFSWDSKTSKPTLSDINLEIPVGSLVAIVGGTGEGKTSLISAMLGELSHAETSSV------------VIRGSVAY 683 (1495)
T ss_pred EEEeeEEEcCCCCCCceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCcccCCCEE------------EecCcEEE
Confidence 999999999854456799999999999999999999999999999999999999998763 24679999
Q ss_pred EecCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHccCCCEE
Q 048639 338 VSQEPSLFTGSLMDNIKVGNMDADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVKNPPIL 417 (1139)
Q Consensus 338 v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~~~~il 417 (1139)
|+|+||||++||||||+||++ .+++++.++++.++++++++.+|+|++|.+||+|.+|||||||||+||||+|++|+||
T Consensus 684 v~Q~p~Lf~gTIreNI~fg~~-~~~e~~~~vl~~~~L~~di~~Lp~Gd~T~IGe~G~~LSGGQkQRIaLARAly~~~~Il 762 (1495)
T PLN03232 684 VPQVSWIFNATVRENILFGSD-FESERYWRAIDVTALQHDLDLLPGRDLTEIGERGVNISGGQKQRVSMARAVYSNSDIY 762 (1495)
T ss_pred EcCccccccccHHHHhhcCCc-cCHHHHHHHHHHhCCHHHHHhCCCCCCceecCCCcccCHHHHHHHHHHHHHhcCCCEE
Confidence 999999999999999999985 6788999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCCCCHHhHHHHH-HHHHHHcCCCeEEEEecCccchhccCEEEEEeCcEEEEecChhhhhccchHHHHHHhhccC
Q 048639 418 LLDEATSALDSESEKLVQ-EALERAMQGRTVILIAHRMSTIVNADMIAVVEDGQVTETGTHHSLLQTSDFYNRLFTMQNL 496 (1139)
Q Consensus 418 llDEpts~LD~~~~~~i~-~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~ 496 (1139)
||||||||||+++++.+. +++....+++|+|+||||++.++.||+|++|++|+|+++|+|++++++++.|.+++..+..
T Consensus 763 LLDEptSaLD~~t~~~I~~~~l~~~l~~kT~IlvTH~~~~l~~aD~Ii~L~~G~i~~~Gt~~eL~~~~~~~~~l~~~~~~ 842 (1495)
T PLN03232 763 IFDDPLSALDAHVAHQVFDSCMKDELKGKTRVLVTNQLHFLPLMDRIILVSEGMIKEEGTFAELSKSGSLFKKLMENAGK 842 (1495)
T ss_pred EEcCCccccCHHHHHHHHHHHhhhhhcCCEEEEEECChhhHHhCCEEEEEeCCEEEEecCHHHHHhcchhHHHHHHhccc
Confidence 999999999999988775 4566667899999999999999999999999999999999999999988999988865442
Q ss_pred CCCCCcCcc-cccccccccchhhhhhhcccCchhhhhhcccccchhhhcccccchhhHHHHhhchh-h-HHHHHHHHHHH
Q 048639 497 RPIDDSRTK-ASTVESTSTEQQISVVEQLEEPEESKRELSASTGQEEVKGKRTTIFFRIWFCLNER-E-LLRLVVGTVAA 573 (1139)
Q Consensus 497 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~ 573 (1139)
.+...+... ..................................++++...+... +..|.+|.+. + ++.+.+.+++.
T Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~-~~vy~~y~~~~~~~~~~~~~~~~~ 921 (1495)
T PLN03232 843 MDATQEVNTNDENILKLGPTVTIDVSERNLGSTKQGKRGRSVLVKQEERETGIIS-WNVLMRYNKAVGGLWVVMILLVCY 921 (1495)
T ss_pred ccccccccccccccccccccccccccccccccccccccchhhhhhHHHHhcCccc-HHHHHHHHHHcCcHHHHHHHHHHH
Confidence 111100000 000000000000000000000000000000000011111222233 3334444443 2 22222222222
Q ss_pred HHHhhHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCc
Q 048639 574 AFSGISKPLFGFFIITIGVAYYDPQAKQEVGWYSLAFSLVGLFSLFTHTLQHYFFGVVGEKAMTNLRRTLYTGVLRNEIA 653 (1139)
Q Consensus 574 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~~~~ 653 (1139)
.+..+......+|+..|.... ........+|.++|++++++..++.+++.+++...+.+++.++|++++++++++|++
T Consensus 922 ~~~~~~~~~~~~wl~~w~~~~--~~~~~~~~~~l~~y~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~p~~ 999 (1495)
T PLN03232 922 LTTEVLRVSSSTWLSIWTDQS--TPKSYSPGFYIVVYALLGFGQVAVTFTNSFWLISSSLHAAKRLHDAMLNSILRAPML 999 (1495)
T ss_pred HHHHHHHHHHHHHHHHHhccc--CCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCee
Confidence 222222222223333222210 001123457888999999999999999999999999999999999999999999999
Q ss_pred ccccCCCChhHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH---Hhh
Q 048639 654 WFEKPQNDAGSLTSRIVSDTSMVKAIISDRMSVIVQCISSILIATIVSLVVDWRMALVAWAVMPCHFIGGLIQA---KSA 730 (1139)
Q Consensus 654 ff~~~~~~~G~i~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~~~~~p~~~~~~~~~~---~~~ 730 (1139)
||+ .+|+|+++|||++|++.+|..++..+..++..++.++++++++++.++...+ +++|+.+++...+. +..
T Consensus 1000 ff~--~~~~G~ilnr~s~Di~~id~~l~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 1074 (1495)
T PLN03232 1000 FFH--TNPTGRVINRFSKDIGDIDRNVANLMNMFMNQLWQLLSTFALIGTVSTISLW---AIMPLLILFYAAYLYYQSTS 1074 (1495)
T ss_pred eeC--cCCchHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHH
Confidence 999 7899999999999999999999999999999888888887777766653332 33344333332222 222
Q ss_pred hchhhhHHHHHHHHHHHHHHhhcchHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 731 QGFSGDSAAAHTEFISLTSESASNIRTVASFCHEENILQKAKISLEKTKRSSRKESIKYGVIQGFSLCLWNIAHAVALWY 810 (1139)
Q Consensus 731 ~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 (1139)
+...+......++..+++.|+++|+.|||+|+.++++.+++.+..+...+....... ...|..+.. ..+..++.++.
T Consensus 1075 r~~~~~~~~~~s~~~~~~~E~l~G~~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~wl~~~~--~~~~~~~~~~~ 1151 (1495)
T PLN03232 1075 REVRRLDSVTRSPIYAQFGEALNGLSSIRAYKAYDRMAKINGKSMDNNIRFTLANTS-SNRWLTIRL--ETLGGVMIWLT 1151 (1495)
T ss_pred HHHHHHHHHhcChHHHHHHHHhcChHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH--HHHHHHHHHHH
Confidence 333334444556778999999999999999999999988888887776665433221 122222221 11222222222
Q ss_pred HHHHHh-cCCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCC--CCCCCCc
Q 048639 811 TAVLID-KKQAT-----FRDGIRAYQIFSLTVPSITELWTLIPTVISAITVLAPAFEILDRKTEIEPDAPE--SSESGRI 882 (1139)
Q Consensus 811 ~~~l~~-~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~--~~~~~~~ 882 (1139)
+...+. .+.+. .+.+..++.+......++..+...+..++.++.+++|+.++++.++|.+..... .++.++.
T Consensus 1152 ~~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~eRi~e~~~~~~e~~~~~~~~~~~~~~p~ 1231 (1495)
T PLN03232 1152 ATFAVLRNGNAENQAGFASTMGLLLSYTLNITTLLSGVLRQASKAENSLNSVERVGNYIDLPSEATAIIENNRPVSGWPS 1231 (1495)
T ss_pred HHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccCCCCCCCCCC
Confidence 333333 23221 111222333344455667788888999999999999999999877654321111 1112345
Q ss_pred cccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhh
Q 048639 883 KGRIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRS 962 (1139)
Q Consensus 883 ~g~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~ 962 (1139)
.|.|+|+||+|+|+.+ .++||+|+||+|+|||+||||||||||||||+++|+|+|+|++|+|.|||+|+++++++++|+
T Consensus 1232 ~g~I~f~nVsf~Y~~~-~~~vL~~isl~I~~GekvaIVG~SGSGKSTL~~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~ 1310 (1495)
T PLN03232 1232 RGSIKFEDVHLRYRPG-LPPVLHGLSFFVSPSEKVGVVGRTGAGKSSMLNALFRIVELEKGRIMIDDCDVAKFGLTDLRR 1310 (1495)
T ss_pred CCcEEEEEEEEEECCC-CCcccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCcCCCceEEECCEEhhhCCHHHHHh
Confidence 6889999999999532 347999999999999999999999999999999999999999999999999999999999999
Q ss_pred hceEEccccccccccHHHHhccCCCcCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhcCC
Q 048639 963 QIGLVQQEPLLFSCSIRNNICYGNEAASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIARTLLKR 1042 (1139)
Q Consensus 963 ~i~~V~Qdp~LF~gTIreNL~~~~~~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalARALlr~ 1042 (1139)
+|++|||||+||+|||||||+|++ +++|+|+|+|+++++++++|.++|+||||+|||+|.+|||||||||||||||+|+
T Consensus 1311 ~i~iVpQdp~LF~gTIr~NL~~~~-~~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQrlaLARALLr~ 1389 (1495)
T PLN03232 1311 VLSIIPQSPVLFSGTVRFNIDPFS-EHNDADLWEALERAHIKDVIDRNPFGLDAEVSEGGENFSVGQRQLLSLARALLRR 1389 (1495)
T ss_pred hcEEECCCCeeeCccHHHHcCCCC-CCCHHHHHHHHHHcCCHHHHHhCcCCCCceecCCCCCCCHHHHHHHHHHHHHHhC
Confidence 999999999999999999999985 6899999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhcCCEEEEEeCCEEEEecChhHHhhc
Q 048639 1043 PAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVINSDVIVVMDKGEVVEMGSHSTLVAE 1122 (1139)
Q Consensus 1043 p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~~DrI~vl~~G~ive~G~~~eLl~~ 1122 (1139)
|+|||||||||+||++||+.||++|++.+ +++| +|+||||++|+++||||+|||+|+|+|+|+|+||+++
T Consensus 1390 ~~ILILDEATSaLD~~Te~~Iq~~L~~~~---------~~~T-vI~IAHRl~ti~~~DrIlVL~~G~ivE~Gt~~eLl~~ 1459 (1495)
T PLN03232 1390 SKILVLDEATASVDVRTDSLIQRTIREEF---------KSCT-MLVIAHRLNTIIDCDKILVLSSGQVLEYDSPQELLSR 1459 (1495)
T ss_pred CCEEEEECCcccCCHHHHHHHHHHHHHHc---------CCCE-EEEEeCCHHHHHhCCEEEEEECCEEEEECCHHHHHhC
Confidence 99999999999999999999999999876 4555 9999999999999999999999999999999999988
Q ss_pred cCChHHHHHHHHhh
Q 048639 1123 SQGVYSRLYQLQAF 1136 (1139)
Q Consensus 1123 ~~g~f~~l~~~~~~ 1136 (1139)
++|.|++|++.+..
T Consensus 1460 ~~~~f~~l~~~~~~ 1473 (1495)
T PLN03232 1460 DTSAFFRMVHSTGP 1473 (1495)
T ss_pred CCCHHHHHHHHhCh
Confidence 66799999987643
No 6
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=5.8e-153 Score=1518.57 Aligned_cols=1076 Identities=20% Similarity=0.281 Sum_probs=836.6
Q ss_pred HcCCcccccccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 21 IGGEVGAFDTDLSTGKVITGVSSHMSVIRDAIGEKLGHFLSSFATFFSGVLIAVICCWEVSLLIFLVVPMILVIGATYTK 100 (1139)
Q Consensus 21 l~~~~~~f~~~~~~G~l~~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~l~~l~~~~~~~~~~~~~~~ 100 (1139)
+++|..+++.. ++|+++|++++|++++.+.. ..+..++..++.+++++++++..-...++++++++++++++..++.+
T Consensus 402 L~l~~~~~~~~-~~G~i~nl~s~D~~~i~~~~-~~~~~~~~~~~~i~~~~~ll~~~~g~~~l~~l~~~~~~~~~~~~~~~ 479 (1522)
T TIGR00957 402 LVITNSARKSS-TVGEIVNLMSVDAQRFMDLA-TYINMIWSAPLQVILALYFLWLNLGPSVLAGVAVMVLMVPLNAVMAM 479 (1522)
T ss_pred HhCChhhcCCC-CHHHHHHHHHHhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 88899999886 89999999999999999865 34555666655555555444332222445666667777888888999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 101 RMNAVSATKLLYLSEATSMIEQTISQIKTVFAFVGERSEIKSFSDCMDKQIIISRGEALIKGVGLGMFQSVTFCCWALII 180 (1139)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (1139)
++++..++.++..+++.+.+.|.++||++||+|+||+.+.+++++.++++.+..++...+..+......... ..+.++
T Consensus 480 ~~~~~~~~~~~~~d~r~~~~~E~l~~ik~IK~~~~e~~~~~~i~~~r~~e~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 557 (1522)
T TIGR00957 480 KTKTYQVAHMKSKDNRIKLMNEILNGIKVLKLYAWELAFLDKVEGIRQEELKVLKKSAYLHAVGTFTWVCTP--FLVALI 557 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHH
Confidence 999999999999999999999999999999999999999999999999988877776666554333222111 122233
Q ss_pred HHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccCCCCcccc-CCCccE
Q 048639 181 WVGAVVVTA--KRSTGGEVLAAVMSILFGAIALTYAAPDMQVFNQAKAAGFEIFQVIQRKPRISYSSKGKELE-KIDGNI 257 (1139)
Q Consensus 181 ~~g~~~v~~--~~l~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~~~~~-~~~~~i 257 (1139)
.++.|.+.. +.++++.+|+.+.++..+..|+..++..+..+.++..+.+||.++++.++............ ...+.|
T Consensus 558 ~f~~~~~~~~~~~l~~~~~f~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~l~~~~~~~~~~~~~~~~~~~~~~i 637 (1522)
T TIGR00957 558 TFAVYVTVDENNILDAEKAFVSLALFNILRFPLNILPMVISSIVQASVSLKRLRIFLSHEELEPDSIERRTIKPGEGNSI 637 (1522)
T ss_pred HHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccccccccccCCCCCCcE
Confidence 455666663 56899999998888888888999999999999999999999999997654321110001111 112369
Q ss_pred EEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcceEE
Q 048639 258 DIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNIGA 337 (1139)
Q Consensus 258 ~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 337 (1139)
+++|++|+|++. ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++| +|+|
T Consensus 638 ~~~~~~~~~~~~-~~~~l~~isl~i~~G~~v~IvG~~GsGKSTLl~~l~g~~~~~~G~i~~~g-------------~i~y 703 (1522)
T TIGR00957 638 TVHNATFTWARD-LPPTLNGITFSIPEGALVAVVGQVGCGKSSLLSALLAEMDKVEGHVHMKG-------------SVAY 703 (1522)
T ss_pred EEEEeEEEcCCC-CCceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCccCCcEEEECC-------------EEEE
Confidence 999999999743 35799999999999999999999999999999999999999999999987 6999
Q ss_pred EecCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHccCCCEE
Q 048639 338 VSQEPSLFTGSLMDNIKVGNMDADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVKNPPIL 417 (1139)
Q Consensus 338 v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~~~~il 417 (1139)
|+|+||+|++||+|||.+|.+ .++++..++++.+++.+++..+|+|++|.+|++|.+|||||||||+||||+|++|+|+
T Consensus 704 v~Q~~~l~~~Ti~eNI~~g~~-~~~~~~~~~~~~~~l~~~l~~~~~g~~t~ig~~g~~LSGGQkqRiaLARAl~~~~~il 782 (1522)
T TIGR00957 704 VPQQAWIQNDSLRENILFGKA-LNEKYYQQVLEACALLPDLEILPSGDRTEIGEKGVNLSGGQKQRVSLARAVYSNADIY 782 (1522)
T ss_pred EcCCccccCCcHHHHhhcCCc-cCHHHHHHHHHHhCCHHHHHhcCCCCCceecCCCCCCCHHHHHHHHHHHHHhcCCCEE
Confidence 999999999999999999975 3456666777777888899999999999999999999999999999999999999999
Q ss_pred EEeCCCCCCCHHhHHHHHHHHHH---HcCCCeEEEEecCccchhccCEEEEEeCcEEEEecChhhhhccchHHHHHHhhc
Q 048639 418 LLDEATSALDSESEKLVQEALER---AMQGRTVILIAHRMSTIVNADMIAVVEDGQVTETGTHHSLLQTSDFYNRLFTMQ 494 (1139)
Q Consensus 418 llDEpts~LD~~~~~~i~~~l~~---~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~ 494 (1139)
|||||||+||+++++.+.+.+.+ +.+++|+|+|||+++.+..||+|++|++|+++++|+++++.++.+.|.+++..+
T Consensus 783 lLDEp~saLD~~~~~~i~~~l~~~~~~~~~~tvIlvTH~~~~l~~~D~ii~l~~G~i~~~g~~~~l~~~~~~~~~l~~~~ 862 (1522)
T TIGR00957 783 LFDDPLSAVDAHVGKHIFEHVIGPEGVLKNKTRILVTHGISYLPQVDVIIVMSGGKISEMGSYQELLQRDGAFAEFLRTY 862 (1522)
T ss_pred EEcCCccccCHHHHHHHHHHHhhhhhhhcCCEEEEEeCChhhhhhCCEEEEecCCeEEeeCCHHHHHhcchhHHHHHHhh
Confidence 99999999999999999988853 456899999999999999999999999999999999999998888888887543
Q ss_pred cCCCCCCc-Cc-------cccccc----cc--c---cchhhhh----hhcc-cC------chhh-hh-hcc-c--ccchh
Q 048639 495 NLRPIDDS-RT-------KASTVE----ST--S---TEQQISV----VEQL-EE------PEES-KR-ELS-A--STGQE 541 (1139)
Q Consensus 495 ~~~~~~~~-~~-------~~~~~~----~~--~---~~~~~~~----~~~~-~~------~~~~-~~-~~~-~--~~~~~ 541 (1139)
...+..+. .. ...... .. . ....... .... .. .... .. +.. . ...++
T Consensus 863 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 942 (1522)
T TIGR00957 863 APDEQQGHLEDSWTALVSGEGKEAKLIENGMLVTDVVGKQLQRQLSASSSDSGDQSRHHGSSAELQKAEAKEETWKLMEA 942 (1522)
T ss_pred ccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccccccccccccccccchhhhHHH
Confidence 22111000 00 000000 00 0 0000000 0000 00 0000 00 000 0 00011
Q ss_pred hhcccccchhhHHHHhhchh-hHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHHHH
Q 048639 542 EVKGKRTTIFFRIWFCLNER-ELLRLVVGTVAAAFSGISKPLFGFFIITIGVAYYDPQAKQEVGWYSLAFSLVGLFSLFT 620 (1139)
Q Consensus 542 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (1139)
+....+...+ ..|++|.+. ++...++.+++..+..+......+|+..|.+............+|..+|++++++..++
T Consensus 943 e~~~~g~v~~-~~y~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~w~~~~~~~~~~~~~~~~~~iy~~l~i~~~~~ 1021 (1522)
T TIGR00957 943 DKAQTGQVEL-SVYWDYMKAIGLFITFLSIFLFVCNHVSALASNYWLSLWTDDPMVNGTQNNTSLRLSVYGALGILQGFA 1021 (1522)
T ss_pred HHHhcCcccH-HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCcchHHHHHHHHHHHHHHH
Confidence 1111222223 333444332 33322222222222222333334444443332111111122345667888888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccCCCChhHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 621 HTLQHYFFGVVGEKAMTNLRRTLYTGVLRNEIAWFEKPQNDAGSLTSRIVSDTSMVKAIISDRMSVIVQCISSILIATIV 700 (1139)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~~~~ff~~~~~~~G~i~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~ 700 (1139)
.++..+++...+.+++.++|++++++++++|++||| .+|+|+++|||++|++.+|..++..+..++..++.+++++++
T Consensus 1022 ~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~--~~~~G~ilnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~li~ 1099 (1522)
T TIGR00957 1022 VFGYSMAVSIGGIQASRVLHQDLLHNKLRSPMSFFE--RTPSGNLVNRFSKELDTVDSMIPPVIKMFMGSLFNVIGALIV 1099 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHhc--cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888889999999999999999999999999999999 789999999999999999999999999999999999999888
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHHHHHHhhcchHHHHhhcchHHHHHHHHHHHHHHHH
Q 048639 701 SLVVDWRMALVAWAVMPCHFIGGLIQAKSAQGFSGDSAAAHTEFISLTSESASNIRTVASFCHEENILQKAKISLEKTKR 780 (1139)
Q Consensus 701 ~~~~~~~l~lv~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~ 780 (1139)
+++.+|.++++++++++++++...++.+..+...+......++..+++.|+++|++|||+|++++++.+++.+..+...+
T Consensus 1100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~l~~~~~E~l~Gi~tIraf~~~~~f~~~~~~~~~~~~~ 1179 (1522)
T TIGR00957 1100 ILLATPIAAVIIPPLGLLYFFVQRFYVASSRQLKRLESVSRSPVYSHFNETLLGVSVIRAFEEQERFIHQSDLKVDENQK 1179 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCCcHHHHHhhhHHHHHHHHHHHHHHHHH
Confidence 88888876655555544444444444444444444445556778999999999999999999999999999999998887
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 781 SSRKESIKYGVIQGFSLCLWNIAHAVALWYTAVLID-KKQATFRDGIRAYQIFSLTVPSITELWTLIPTVISAITVLAPA 859 (1139)
Q Consensus 781 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri 859 (1139)
..........+.......+ ..+++++++...+. .+.+++|.+.+++.+......++..+...+..++.++.+++|+
T Consensus 1180 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~v~~~~~~~~g~l~~~l~~~~~~~~~l~~l~~~~~~~e~~~~s~eRi 1256 (1522)
T TIGR00957 1180 AYYPSIVANRWLAVRLECV---GNCIVLFAALFAVISRHSLSAGLVGLSVSYSLQVTFYLNWLVRMSSEMETNIVAVERL 1256 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7655433332222222222 22233344444443 5778999988888888888899999999999999999999999
Q ss_pred HHHhccCCCCCCCCCC--CCCCCCccccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcc
Q 048639 860 FEILDRKTEIEPDAPE--SSESGRIKGRIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRF 937 (1139)
Q Consensus 860 ~~~~~~~~~~~~~~~~--~~~~~~~~g~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl 937 (1139)
.++.+.+++.+...+. .++.++..|.|+|+||+|+|+++ ..+||+|+||+|+||||||||||||||||||+++|+|+
T Consensus 1257 ~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~-~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl 1335 (1522)
T TIGR00957 1257 KEYSETEKEAPWQIQETAPPSGWPPRGRVEFRNYCLRYRED-LDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRI 1335 (1522)
T ss_pred HHHhcCCCCccccccCCCCCCCCCCCCcEEEEEEEEEeCCC-CcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcC
Confidence 9999776654311111 11122456899999999999754 24799999999999999999999999999999999999
Q ss_pred ccCCccEEEECCcccCCCChHHHhhhceEEccccccccccHHHHhccCCCcCCHHHHHHHHHHcCchHHHhhCCCCcccc
Q 048639 938 YDPNEGIILIDGKGIKEYNLRRLRSQIGLVQQEPLLFSCSIRNNICYGNEAASEAEIVEVSKKANIHDFISSLPDGYDTV 1017 (1139)
Q Consensus 938 ~~p~~G~I~idG~di~~~~l~~lR~~i~~V~Qdp~LF~gTIreNL~~~~~~~sd~ei~~al~~~~l~~~i~~lp~gldt~ 1017 (1139)
|+|++|+|.|||+||+++++++||++|++|||||+||+||||+||+|+. +++|+|+|+|+++++++++|.++|+||||+
T Consensus 1336 ~~~~~G~I~IdG~dI~~i~~~~LR~~i~iVpQdp~LF~gTIr~NLdp~~-~~sdeei~~al~~a~l~~~I~~lp~GLdt~ 1414 (1522)
T TIGR00957 1336 NESAEGEIIIDGLNIAKIGLHDLRFKITIIPQDPVLFSGSLRMNLDPFS-QYSDEEVWWALELAHLKTFVSALPDKLDHE 1414 (1522)
T ss_pred ccCCCCeEEECCEEccccCHHHHHhcCeEECCCCcccCccHHHHcCccc-CCCHHHHHHHHHHcCcHHHHhhCccCCCce
Confidence 9999999999999999999999999999999999999999999999764 699999999999999999999999999999
Q ss_pred ccCCCCCCChHHHHHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhh
Q 048639 1018 VGEKGCQLSGGQKQRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVI 1097 (1139)
Q Consensus 1018 v~e~G~~LSgGQrQrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~ 1097 (1139)
|||+|.+|||||||||||||||+|+|||||||||||+||++||+.||++|++.+ +++| ||+||||++|++
T Consensus 1415 v~e~G~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~---------~~~T-vI~IAHRl~ti~ 1484 (1522)
T TIGR00957 1415 CAEGGENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQF---------EDCT-VLTIAHRLNTIM 1484 (1522)
T ss_pred ecCCCCcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHc---------CCCE-EEEEecCHHHHH
Confidence 999999999999999999999999999999999999999999999999999876 5555 999999999999
Q ss_pred cCCEEEEEeCCEEEEecChhHHhhccCChHHHHHHHH
Q 048639 1098 NSDVIVVMDKGEVVEMGSHSTLVAESQGVYSRLYQLQ 1134 (1139)
Q Consensus 1098 ~~DrI~vl~~G~ive~G~~~eLl~~~~g~f~~l~~~~ 1134 (1139)
+||||+|||+|+|+|+|+|+||+++ +|.|++|+++.
T Consensus 1485 ~~DrIlVld~G~IvE~G~~~eLl~~-~~~f~~l~~~~ 1520 (1522)
T TIGR00957 1485 DYTRVIVLDKGEVAEFGAPSNLLQQ-RGIFYSMAKDA 1520 (1522)
T ss_pred hCCEEEEEECCEEEEECCHHHHHhC-CCHHHHHHHHc
Confidence 9999999999999999999999987 79999999863
No 7
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=1.3e-146 Score=1451.98 Aligned_cols=1075 Identities=21% Similarity=0.276 Sum_probs=820.8
Q ss_pred HcCCcccccc-cCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHH
Q 048639 21 IGGEVGAFDT-DLSTGKVITGVSSHMSVIRDAIGEKLGHFLSSFATFFSGVLIAVICCWEVSLLIFLVVPMILVIGATYT 99 (1139)
Q Consensus 21 l~~~~~~f~~-~~~~G~l~~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~l~~l~~~~~~~~~~~~~~ 99 (1139)
++.+...+.. ..++|+++|++++|++++.+++.. +..++..++.+++++++++.+..+.++++++++++++++..++.
T Consensus 329 l~ls~~~~~~~~~~~G~i~nl~s~Dv~~i~~~~~~-~~~l~~~Pl~li~~~~lL~~~lG~~al~gv~vl~v~~pl~~~~~ 407 (1560)
T PTZ00243 329 FTISSKSLAQPDMNTGRIINMMSTDVERINSFMQY-CMYLWSSPMVLLLSILLLSRLVGWCALMAVAVLLVTLPLNGAIM 407 (1560)
T ss_pred HhCChhhhCCCCCCHHHHHHHHHHhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 6666655541 236899999999999999999854 55666777777776666665544477888888888889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 100 KRMNAVSATKLLYLSEATSMIEQTISQIKTVFAFVGERSEIKSFSDCMDKQIIISRGEALIKGVGLGMFQSVTFCCWALI 179 (1139)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (1139)
++..+..++.++..|++.+.+.|.++|||+||+++||+.+.+++++.++++.+..++......+...+......+.. +
T Consensus 408 k~~~~~~~~~~~~~D~Ri~~~~E~l~gIr~IK~~~wE~~f~~ri~~~R~~El~~l~~~~~~~~~~~~~~~~~p~l~~--~ 485 (1560)
T PTZ00243 408 KHQMAARRKIAKAADARVKATNEFFSGIRIAKFMAWEPCFVANIEDKRARELRYLRDVQLARVATSFVNNATPTLMI--A 485 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--H
Confidence 99999999999999999999999999999999999999999999999999999888877777665555444333332 2
Q ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCc----c--C--------C
Q 048639 180 IWVGAVVVTAKRSTGGEVLAAVMSILFGAIALTYAAPDMQVFNQAKAAGFEIFQVIQRKPRIS----Y--S--------S 245 (1139)
Q Consensus 180 ~~~g~~~v~~~~l~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~----~--~--------~ 245 (1139)
+.+++|.+.++.+|++.+|+++.++..+..|+..++..+..+.++.+|++||.++|+.++... . . .
T Consensus 486 ~~f~~y~~~g~~Lt~~~vft~laL~~~L~~Pl~~lp~~~~~~~~a~vS~~RI~~fL~~~e~~~~~~~~~~~~~~~~~~~~ 565 (1560)
T PTZ00243 486 VVFTVYYLLGHELTPEVVFPTIALLGVLRMPFFMIPWVFTTVLQFLVSIKRISTFLECDNATCSTVQDMEEYWREQREHS 565 (1560)
T ss_pred HHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccccccccccchhhcccccccc
Confidence 346778888999999999999999999999999999999999999999999999997543100 0 0 0
Q ss_pred C--C---------------cc---------------------------ccCCCccEEEEeEEEECCCC------------
Q 048639 246 K--G---------------KE---------------------------LEKIDGNIDIRDVCFAYPSR------------ 269 (1139)
Q Consensus 246 ~--~---------------~~---------------------------~~~~~~~i~~~~v~~~y~~~------------ 269 (1139)
. . .+ .....+.+.++|+++.++..
T Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (1560)
T PTZ00243 566 TACQLAAVLENVDVTAFVPVKLPRAPKVKTSLLSRALRMLCCEQCRPTKRHPSPSVVVEDTDYGSPSSASRHIVEGGTGG 645 (1560)
T ss_pred cccccccccccccccccccccccccccccccccccchhhccccccccccccccccccccccccccccccccccccccccc
Confidence 0 0 00 00011246777877765310
Q ss_pred -------------------------CCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCC
Q 048639 270 -------------------------PDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIK 324 (1139)
Q Consensus 270 -------------------------~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~ 324 (1139)
.++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++
T Consensus 646 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~isl~i~~G~~~~IiG~nGsGKSTLL~~i~G~~~~~~G~i~~~----- 720 (1560)
T PTZ00243 646 GHEATPTSERSAKTPKMKTDDFFELEPKVLLRDVSVSVPRGKLTVVLGATGSGKSTLLQSLLSQFEISEGRVWAE----- 720 (1560)
T ss_pred cccccccccccccccccccccccccCCceeEeeeEEEECCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEEC-----
Confidence 12458999999999999999999999999999999999999999999874
Q ss_pred CCCHHHHhcceEEEecCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHH
Q 048639 325 DLDLKSLRKNIGAVSQEPSLFTGSLMDNIKVGNMDADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRI 404 (1139)
Q Consensus 325 ~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi 404 (1139)
++|+||+|+||+|++||+|||.++.+. +.+++.++++.++++++++.+|+|++|.+|++|.+|||||||||
T Consensus 721 --------~~i~yv~Q~~~l~~~Tv~enI~~~~~~-~~~~~~~~~~~~~l~~~l~~l~~g~~t~i~~~g~~LSGGQkqRv 791 (1560)
T PTZ00243 721 --------RSIAYVPQQAWIMNATVRGNILFFDEE-DAARLADAVRVSQLEADLAQLGGGLETEIGEKGVNLSGGQKARV 791 (1560)
T ss_pred --------CeEEEEeCCCccCCCcHHHHHHcCChh-hHHHHHHHHHHhhhHHHHHHhhccchHHhcCCCCCCCHHHHHHH
Confidence 479999999999999999999998642 44556677777888899999999999999999999999999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCCCHHhHHHHHH-HHHHHcCCCeEEEEecCccchhccCEEEEEeCcEEEEecChhhhhcc
Q 048639 405 AIARAIVKNPPILLLDEATSALDSESEKLVQE-ALERAMQGRTVILIAHRMSTIVNADMIAVVEDGQVTETGTHHSLLQT 483 (1139)
Q Consensus 405 ~lARal~~~~~illlDEpts~LD~~~~~~i~~-~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 483 (1139)
+|||||+++|+|+|||||||+||+++++.+.+ ++....+++|+|+|||+++.+..||+|++|++|+++++|+++++++.
T Consensus 792 aLARAl~~~p~illLDEP~saLD~~~~~~i~~~~~~~~~~~~TvIlvTH~~~~~~~ad~ii~l~~G~i~~~G~~~~l~~~ 871 (1560)
T PTZ00243 792 SLARAVYANRDVYLLDDPLSALDAHVGERVVEECFLGALAGKTRVLATHQVHVVPRADYVVALGDGRVEFSGSSADFMRT 871 (1560)
T ss_pred HHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEecCHHHHHhC
Confidence 99999999999999999999999998877765 45455578999999999999989999999999999999999999875
Q ss_pred chHHHHHHhhccCCCCC-CcCcccccccccc-cc---hhhhhhhcccCc-hhh---hhhcc-cccchhhhcccccchhhH
Q 048639 484 SDFYNRLFTMQNLRPID-DSRTKASTVESTS-TE---QQISVVEQLEEP-EES---KRELS-ASTGQEEVKGKRTTIFFR 553 (1139)
Q Consensus 484 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~---~~~~~~~~~~~~-~~~---~~~~~-~~~~~~~~~~~~~~~~~~ 553 (1139)
+.|..+.......... +.....+...... .. ............ ... ..+.. ....+++....+...+..
T Consensus 872 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~e~~~~g~v~~~~ 950 (1560)
T PTZ00243 872 -SLYATLAAELKENKDSKEGDADAEVAEVDAAPGGAVDHEPPVAKQEGNAEGGDGAALDAAAGRLMTREEKASGSVPWST 950 (1560)
T ss_pred -hHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccccccccccchhhhHHHHhcCcccHHH
Confidence 4566665432211110 0000000000000 00 000000000000 000 00000 000011111122233333
Q ss_pred HHHhhchh-h-HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 554 IWFCLNER-E-LLRLVVGTVAAAFSGISKPLFGFFIITIGVAYYDPQAKQEVGWYSLAFSLVGLFSLFTHTLQHYFFGVV 631 (1139)
Q Consensus 554 ~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 631 (1139)
+ ..|.+. + +..+++.+++.++..+......+|+..|.. .........|+.+|+++.++..+..+++.+.....
T Consensus 951 y-~~Y~~~~g~~~~~~~~l~~~~~~~~~~~~~~~wl~~w~~----~~~~~~~~~~l~~y~~~~~~~~~~~~l~~~~~~~~ 1025 (1560)
T PTZ00243 951 Y-VAYLRFCGGLHAAGFVLATFAVTELVTVSSGVWLSMWST----RSFKLSAATYLYVYLGIVLLGTFSVPLRFFLSYEA 1025 (1560)
T ss_pred H-HHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc----cccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3 333332 1 111111111111222222222233332222 11112234567777777777777777777777778
Q ss_pred HHHHHHHHHHHHHHHHHcCCCcccccCCCChhHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Q 048639 632 GEKAMTNLRRTLYTGVLRNEIAWFEKPQNDAGSLTSRIVSDTSMVKAIISDRMSVIVQCISSILIATIVSLVVDWRMALV 711 (1139)
Q Consensus 632 ~~~~~~~l~~~l~~~ll~~~~~ff~~~~~~~G~i~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv 711 (1139)
+.+.+.++|+++|++++++|++||| .+++|+++|||++|++.+|..++..+..++..++.++++++++++.+|.+.+
T Consensus 1026 ~~~~~~~l~~~l~~~ll~~p~~ffd--~~~~G~ilnR~s~Di~~id~~l~~~l~~~~~~~~~~i~~li~~~~~~p~~~~- 1102 (1560)
T PTZ00243 1026 MRRGSRNMHRDLLRSVSRGTMSFFD--TTPLGRILNRFSRDIDILDNTLPMSYLYLLQCLFSICSSILVTSASQPFVLV- 1102 (1560)
T ss_pred HHHHHHHHHHHHHHHHHcCChhhcc--CCCccHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 8888999999999999999999999 7899999999999999999999999999999999999998888888874433
Q ss_pred HHHHHHHHHHHHHH---HHHhhhchhhhHHHHHHHHHHHHHHhhcchHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 712 AWAVMPCHFIGGLI---QAKSAQGFSGDSAAAHTEFISLTSESASNIRTVASFCHEENILQKAKISLEKTKRSSRKESIK 788 (1139)
Q Consensus 712 ~~~~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 (1139)
+++|+.+++..+ +.+..+...+......++..+++.|+++|+.|||+|+.++.+.+++.+..+...+........
T Consensus 1103 --~~i~~~~~~~~i~~~~~~~~r~~~r~~~~~~s~l~s~~~E~l~G~~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~ 1180 (1560)
T PTZ00243 1103 --ALVPCGYLYYRLMQFYNSANREIRRIKSVAKSPVFTLLEEALQGSATITAYGKAHLVMQEALRRLDVVYSCSYLENVA 1180 (1560)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHHHcCHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444333333 333333333334445667899999999999999999999999999999999988877665444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH--HhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Q 048639 789 YGVIQGFSLCLWNIAHAVALWYTAVL--IDKKQATFRDGIRAYQIFSLTVPSITELWTLIPTVISAITVLAPAFEILDRK 866 (1139)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~ 866 (1139)
..+.......+..+..+++.+++... ...+..+++.+..++.+......++..+...+..++.++.+++|+.++++..
T Consensus 1181 ~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~l~~a~~l~~~l~~l~~~~~~le~~~~s~eRi~~~~~~~ 1260 (1560)
T PTZ00243 1181 NRWLGVRVEFLSNIVVTVIALIGVIGTMLRATSQEIGLVSLSLTMAMQTTATLNWLVRQVATVEADMNSVERLLYYTDEV 1260 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 43333333333333333333333332 2334567777767777777778888999999999999999999999999654
Q ss_pred CCCCCCC-------------------------CCCC----CCCCccccEEEEeEEEECCCCCCcccccceeEEEeCCcEE
Q 048639 867 TEIEPDA-------------------------PESS----ESGRIKGRIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKV 917 (1139)
Q Consensus 867 ~~~~~~~-------------------------~~~~----~~~~~~g~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~v 917 (1139)
++++... +... +.++..|.|+|+||+|+|+++ ..+||+||||+|+|||||
T Consensus 1261 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~f~nVsf~Y~~~-~~~vL~~vsf~I~~GekV 1339 (1560)
T PTZ00243 1261 PHEDMPELDEEVDALERRTGMAADVTGTVVIEPASPTSAAPHPVQAGSLVFEGVQMRYREG-LPLVLRGVSFRIAPREKV 1339 (1560)
T ss_pred CccccccccccccccccccccccccccccccccCCCcccCCCCCCCCeEEEEEEEEEeCCC-CCceeecceEEECCCCEE
Confidence 3321000 0000 111245889999999999753 346999999999999999
Q ss_pred EEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhceEEccccccccccHHHHhccCCCcCCHHHHHHH
Q 048639 918 ALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQIGLVQQEPLLFSCSIRNNICYGNEAASEAEIVEV 997 (1139)
Q Consensus 918 aIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~~V~Qdp~LF~gTIreNL~~~~~~~sd~ei~~a 997 (1139)
|||||||||||||+++|+|+|+|++|+|+|||+||+++++++||++|++|||||+||+||||+||+++. +++|+|+|+|
T Consensus 1340 aIVGrTGSGKSTLl~lLlrl~~p~~G~I~IDG~di~~i~l~~LR~~I~iVpQdp~LF~gTIreNIdp~~-~~sdeeI~~A 1418 (1560)
T PTZ00243 1340 GIVGRTGSGKSTLLLTFMRMVEVCGGEIRVNGREIGAYGLRELRRQFSMIPQDPVLFDGTVRQNVDPFL-EASSAEVWAA 1418 (1560)
T ss_pred EEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccCCHHHHHhcceEECCCCccccccHHHHhCccc-CCCHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999974 7899999999
Q ss_pred HHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhcCC-CCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCC
Q 048639 998 SKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIARTLLKR-PAIMLLDEATSALDAESERVIVSALEALNPKSSS 1076 (1139)
Q Consensus 998 l~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalARALlr~-p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~ 1076 (1139)
|++++++++|.++|+||||.|||+|.||||||||||||||||+++ |+|||||||||+||++||+.|+++|++.+
T Consensus 1419 l~~a~l~~~I~~lp~Gldt~vge~G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~Iq~~L~~~~----- 1493 (1560)
T PTZ00243 1419 LELVGLRERVASESEGIDSRVLEGGSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQIQATVMSAF----- 1493 (1560)
T ss_pred HHHCCChHHHhhCcccccccccCCcCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHHHHHHHHHC-----
Confidence 999999999999999999999999999999999999999999996 89999999999999999999999999876
Q ss_pred ccccCCCeEEEEEecCchhhhcCCEEEEEeCCEEEEecChhHHhhccCChHHHHHHHHh
Q 048639 1077 CGELASRTTQITVAHRLATVINSDVIVVMDKGEVVEMGSHSTLVAESQGVYSRLYQLQA 1135 (1139)
Q Consensus 1077 ~~~~~~~tTvI~IaHrl~ti~~~DrI~vl~~G~ive~G~~~eLl~~~~g~f~~l~~~~~ 1135 (1139)
+++| +|+||||++|+.+||||+|||+|+|+|+|+|+||+++++|.|++|++.+.
T Consensus 1494 ----~~~T-vI~IAHRl~ti~~~DrIlVLd~G~VvE~Gt~~eLl~~~~~~f~~l~~~~~ 1547 (1560)
T PTZ00243 1494 ----SAYT-VITIAHRLHTVAQYDKIIVMDHGAVAEMGSPRELVMNRQSIFHSMVEALG 1547 (1560)
T ss_pred ----CCCE-EEEEeccHHHHHhCCEEEEEECCEEEEECCHHHHHhCCCCHHHHHHHHhC
Confidence 4555 99999999999999999999999999999999999877899999998764
No 8
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=7.5e-145 Score=1436.02 Aligned_cols=1072 Identities=19% Similarity=0.237 Sum_probs=807.7
Q ss_pred HcCCcccccccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 21 IGGEVGAFDTDLSTGKVITGVSSHMSVIRDAIGEKLGHFLSSFATFFSGVLIAVICCWEVSLLIFLVVPMILVIGATYTK 100 (1139)
Q Consensus 21 l~~~~~~f~~~~~~G~l~~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~l~~l~~~~~~~~~~~~~~~ 100 (1139)
++.+...+++. ++|+++|++++|++++.+++... ..++..++.++++++++++...+.+++.++++++++++..++++
T Consensus 166 L~l~~~~~~~~-~~g~i~nl~s~Dv~~i~~~~~~~-~~~~~~pi~i~~~~~lL~~~~G~~~l~~l~v~~~~~~~~~~~~~ 243 (1490)
T TIGR01271 166 LKLSSRVLDKI-STGQLVSLLSNNLNKFDEGLALA-HFVWIAPLQVILLMGLIWELLEVNGFCGLGFLILLALFQACLGQ 243 (1490)
T ss_pred HhCCHHHhcCC-CHHHHHHHHHHhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888875 89999999999999999987654 44555556555555555554444678888888999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 101 RMNAVSATKLLYLSEATSMIEQTISQIKTVFAFVGERSEIKSFSDCMDKQIIISRGEALIKGVGLGMFQSVTFCCWALII 180 (1139)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (1139)
++.+..++.++..+++.+.+.|.++|||+||+|+||+.+.+++++.++++.+...+...+..+...+..+.. ..+.++
T Consensus 244 ~~~~~~~~~~~~~d~R~~~~~E~l~~ik~IK~~~~E~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 321 (1490)
T TIGR01271 244 KMMPYRDKRAGKISERLAITSEIIENIQSVKAYCWEEAMEKIIKNIRQDELKLTRKIAYLRYFYSSAFFFSG--FFVVFL 321 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHH
Confidence 999999999999999999999999999999999999999999999999999888887776644443333222 233445
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhccCCCCccCCCCccccCCCccEEE
Q 048639 181 WVGAVVVTAKRSTGGEVLAAVMSILFGAIALT-YAAPDMQVFNQAKAAGFEIFQVIQRKPRISYSSKGKELEKIDGNIDI 259 (1139)
Q Consensus 181 ~~g~~~v~~~~l~~g~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~~~~~~~~~~i~~ 259 (1139)
.+++|.+.++ ++++.+|+++.++..+..|+. .++..+..+.++.++++||.++|..++..... .. .....+++
T Consensus 322 ~f~~y~~~~~-~~~~~~ft~lal~~lL~~~l~~~lp~~~~~~~~a~~s~~RI~~fL~~~e~~~~~---~~--~~~~~i~~ 395 (1490)
T TIGR01271 322 SVVPYALIKG-IILRRIFTTISYCIVLRMTVTRQFPGAIQTWYDSLGAITKIQDFLCKEEYKTLE---YN--LTTTEVEM 395 (1490)
T ss_pred HHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccc---cc--CCCCceEE
Confidence 6677776654 689999999888887777874 68888999999999999999999865432111 00 11235999
Q ss_pred EeEEEECCCC-------------------------------CCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhc
Q 048639 260 RDVCFAYPSR-------------------------------PDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARF 308 (1139)
Q Consensus 260 ~~v~~~y~~~-------------------------------~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~ 308 (1139)
+|++|.|+.. ..+++|+|+||+|++||+++|+||||||||||+++|+|+
T Consensus 396 ~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~i~l~i~~G~~~~I~G~~GsGKSTLl~~l~G~ 475 (1490)
T TIGR01271 396 VNVTASWDEGIGELFEKIKQNNKARKQPNGDDGLFFSNFSLYVTPVLKNISFKLEKGQLLAVAGSTGSGKSSLLMMIMGE 475 (1490)
T ss_pred ecceEecCCccccccccccccccccccccccccccccccccccCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCC
Confidence 9999999531 013689999999999999999999999999999999999
Q ss_pred cCCCccEEEECCccCCCCCHHHHhcceEEEecCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCCCcc
Q 048639 309 YDPSNGDILIDSLNIKDLDLKSLRKNIGAVSQEPSLFTGSLMDNIKVGNMDADDEQIYNASMMANAHSFISQLPDQYSTE 388 (1139)
Q Consensus 309 ~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~ 388 (1139)
++|++|+|.++| +|+||+|+||+|++||+|||.||.+ .+.++..++++.+++.+++..+|+|++|.
T Consensus 476 ~~~~~G~i~~~g-------------~iayv~Q~~~l~~~Ti~eNI~~g~~-~~~~~~~~~~~~~~L~~~l~~l~~g~~t~ 541 (1490)
T TIGR01271 476 LEPSEGKIKHSG-------------RISFSPQTSWIMPGTIKDNIIFGLS-YDEYRYTSVIKACQLEEDIALFPEKDKTV 541 (1490)
T ss_pred CCCCCceEEECC-------------EEEEEeCCCccCCccHHHHHHhccc-cchHHHHHHHHHHhHHHHHHhcccccccc
Confidence 999999999998 5999999999999999999999964 33444556666677888999999999999
Q ss_pred ccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHH-HHHHHcCCCeEEEEecCccchhccCEEEEEe
Q 048639 389 LGQRGVQLSGGQKQRIAIARAIVKNPPILLLDEATSALDSESEKLVQE-ALERAMQGRTVILIAHRMSTIVNADMIAVVE 467 (1139)
Q Consensus 389 i~~~g~~LSgGqkqRi~lARal~~~~~illlDEpts~LD~~~~~~i~~-~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~ 467 (1139)
+|++|.+|||||||||+||||+|++|+|+|||||||+||+++++.+.+ ++.++.+++|+|+|||+++.+..||+|++|+
T Consensus 542 vg~~g~~LSgGqkqRi~lARAl~~~~~illLDep~saLD~~~~~~i~~~~l~~~~~~~tvilvtH~~~~~~~ad~ii~l~ 621 (1490)
T TIGR01271 542 LGEGGITLSGGQRARISLARAVYKDADLYLLDSPFTHLDVVTEKEIFESCLCKLMSNKTRILVTSKLEHLKKADKILLLH 621 (1490)
T ss_pred ccCcCCCcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCChHHHHhCCEEEEEE
Confidence 999999999999999999999999999999999999999999999887 5677777999999999999998899999999
Q ss_pred CcEEEEecChhhhhccchHHHHHHhhccC-C----C---------------C--C-----CcC--c---ccccc--cc--
Q 048639 468 DGQVTETGTHHSLLQTSDFYNRLFTMQNL-R----P---------------I--D-----DSR--T---KASTV--ES-- 511 (1139)
Q Consensus 468 ~G~i~~~g~~~~l~~~~~~~~~~~~~~~~-~----~---------------~--~-----~~~--~---~~~~~--~~-- 511 (1139)
+|++++.|+++++.+..+.|...+..... . . . . ++. . ..... +.
T Consensus 622 ~g~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 701 (1490)
T TIGR01271 622 EGVCYFYGTFSELQAKRPDFSSLLLGLEAFDNFSAERRNSILTETLRRVSIDGDSTVFSGPETIKQSFKQPPPEFAEKRK 701 (1490)
T ss_pred CCEEEEEcCHHHHHhcChHHHHHHhccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999999998776666665531100 0 0 0 0 000 0 00000 00
Q ss_pred --------------------------cccchhhhhhh-------cc------cCc------------------------h
Q 048639 512 --------------------------TSTEQQISVVE-------QL------EEP------------------------E 528 (1139)
Q Consensus 512 --------------------------~~~~~~~~~~~-------~~------~~~------------------------~ 528 (1139)
...+....... .. ..+ .
T Consensus 702 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 781 (1490)
T TIGR01271 702 QSIILNPIASARKFSFVQMGPQKAQATTIEDAVREPSERKFSLVPEDEQGEESLPRGNQYHHGLQHQAQRRQSVLQLMTH 781 (1490)
T ss_pred ccccccccccccccccccccccccccccccchhcccccccccccccccccccccccccccccccccccccccchhhcccc
Confidence 00000000000 00 000 0
Q ss_pred -------h------hh------------h-------h-ccc-----ccc----------hhhhcccccchhhHHHHhhch
Q 048639 529 -------E------SK------------R-------E-LSA-----STG----------QEEVKGKRTTIFFRIWFCLNE 560 (1139)
Q Consensus 529 -------~------~~------------~-------~-~~~-----~~~----------~~~~~~~~~~~~~~~~~~~~~ 560 (1139)
. .. . . ... ..+ .+++....+...+..|++|.+
T Consensus 782 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~vY~~Y~~ 861 (1490)
T TIGR01271 782 SNRGENRREQLQTSFRKKSSITQQNELASELDIYSRRLSKDSVYEISEEINEEDLKECFADERENVFETTTWNTYLRYIT 861 (1490)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhhHHHHhhcCcccHHHHHHHHH
Confidence 0 00 0 0 000 000 000001111223444454443
Q ss_pred h-h-HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHh--cC-ch-h-------------hhhHHHH-HHHHHHHHHHHHHH
Q 048639 561 R-E-LLRLVVGTVAAAFSGISKPLFGFFIITIGVAY--YD-PQ-A-------------KQEVGWY-SLAFSLVGLFSLFT 620 (1139)
Q Consensus 561 ~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~-~-------------~~~~~~~-~~~~~~~~~~~~~~ 620 (1139)
. + +..+++.+++.++..++.....+|+..|.... +. .. . .....+| ..+|++++++..++
T Consensus 862 ~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 941 (1490)
T TIGR01271 862 TNRNLVFVLIFCLVIFLAEVAASLLGLWLITDNPSAPNYVDQQHANASSPDVQKPVIITPTSAYYIFYIYVGTADSVLAL 941 (1490)
T ss_pred hcCcHHHHHHHHHHHHHHHHHHHHhhHHHHhcccccccccccccccCCCccccccccccCcchhhHHHHHHHHHHHHHHH
Confidence 2 2 22222222222233333333344443332100 00 00 0 0011223 44455555556677
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccCCCChhHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 621 HTLQHYFFGVVGEKAMTNLRRTLYTGVLRNEIAWFEKPQNDAGSLTSRIVSDTSMVKAIISDRMSVIVQCISSILIATIV 700 (1139)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~~~~ff~~~~~~~G~i~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~ 700 (1139)
.+++.+++...+.+++.++|.+++++++++|++||+ .+|+|+++|||++|++.+|+.++..+..++..++.+++.+++
T Consensus 942 ~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~--~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~i~~l~~ 1019 (1490)
T TIGR01271 942 GFFRGLPLVHTLLTVSKRLHEQMLHSVLQAPMAVLN--TMKAGRILNRFTKDMAIIDDMLPLTLFDFIQLTLIVLGAIFV 1019 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhC--CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 788888999999999999999999999999999999 789999999999999999999999999999999999999888
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHHHHHHhhcchHHHHhhcchHHHHHHHHHHHHHHHH
Q 048639 701 SLVVDWRMALVAWAVMPCHFIGGLIQAKSAQGFSGDSAAAHTEFISLTSESASNIRTVASFCHEENILQKAKISLEKTKR 780 (1139)
Q Consensus 701 ~~~~~~~l~lv~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~ 780 (1139)
+++.+|.+.++++++++++++...++.+..+...+......++..+++.|++.|+.|||+|++++.+.+++.+..+...+
T Consensus 1020 i~~~~p~l~l~~~~l~~~~~~~~~~~~~~~r~l~~~~~~~~s~l~~~~~Etl~Gl~tIraf~~~~~~~~~~~~~~~~~~~ 1099 (1490)
T TIGR01271 1020 VSVLQPYIFIAAIPVAVIFIMLRAYFLRTSQQLKQLESEARSPIFSHLITSLKGLWTIRAFGRQSYFETLFHKALNLHTA 1099 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCHHHHHHhCCcHHHHHHHHHHHHHHHH
Confidence 88888876543333322222222333333333333444455678899999999999999999999999999999987665
Q ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 781 SSRKESIKYGVIQGFSL-CLWNIAHAVALWYTAVLIDKKQATFRDGIRAYQIFSLTVPSITELWTLIPTVISAITVLAPA 859 (1139)
Q Consensus 781 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri 859 (1139)
.......... |..... .+..+....+.++ .+.......+.+..++.+......++..+...+..++..+.+++|+
T Consensus 1100 ~~~~~~~~~~-wl~~~~~~i~~~~~~~~~~l---~~~~~~~~~g~~g~~l~~~~~l~~~l~~l~~~~~~le~~~~s~eRi 1175 (1490)
T TIGR01271 1100 NWFLYLSTLR-WFQMRIDIIFVFFFIAVTFI---AIGTNQDGEGEVGIILTLAMNILSTLQWAVNSSIDVDGLMRSVSRV 1175 (1490)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH---HHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5443332222 222222 1111111111111 1111223344444444455555666777888888999999999999
Q ss_pred HHHhccCCCCCCCCC----------------CCCCCCCccccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCC
Q 048639 860 FEILDRKTEIEPDAP----------------ESSESGRIKGRIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPS 923 (1139)
Q Consensus 860 ~~~~~~~~~~~~~~~----------------~~~~~~~~~g~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~s 923 (1139)
.++.+.+++...... ..++.++..|.|+|+||+|+|+.. .+++|+|+||+|+|||||||||||
T Consensus 1176 ~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~-~~~vL~~is~~I~~GekvaIvGrS 1254 (1490)
T TIGR01271 1176 FKFIDLPQEEPRPSGGGGKYQLSTVLVIENPHAQKCWPSGGQMDVQGLTAKYTEA-GRAVLQDLSFSVEGGQRVGLLGRT 1254 (1490)
T ss_pred HHHhcCCCccccccccccccccccccccccCCCCCCCCCCCeEEEEEEEEEeCCC-CcceeeccEEEEcCCCEEEEECCC
Confidence 999977655321110 001113456899999999999753 457999999999999999999999
Q ss_pred CCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhceEEccccccccccHHHHhccCCCcCCHHHHHHHHHHcCc
Q 048639 924 GAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQIGLVQQEPLLFSCSIRNNICYGNEAASEAEIVEVSKKANI 1003 (1139)
Q Consensus 924 GSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~~V~Qdp~LF~gTIreNL~~~~~~~sd~ei~~al~~~~l 1003 (1139)
|||||||+++|+|+++ .+|+|+|||+||++++++.+|++|++|||||+||+||||+||+|+. .++|+++|+||+++++
T Consensus 1255 GsGKSTLl~lL~rl~~-~~G~I~IdG~di~~i~~~~lR~~is~IpQdp~LF~GTIR~NLdp~~-~~tdeei~~aL~~~~L 1332 (1490)
T TIGR01271 1255 GSGKSTLLSALLRLLS-TEGEIQIDGVSWNSVTLQTWRKAFGVIPQKVFIFSGTFRKNLDPYE-QWSDEEIWKVAEEVGL 1332 (1490)
T ss_pred CCCHHHHHHHHhhhcC-CCcEEEECCEEcccCCHHHHHhceEEEeCCCccCccCHHHHhCccc-CCCHHHHHHHHHHCCC
Confidence 9999999999999997 7999999999999999999999999999999999999999999874 6899999999999999
Q ss_pred hHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCC
Q 048639 1004 HDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASR 1083 (1139)
Q Consensus 1004 ~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~ 1083 (1139)
++++.++|+||||+|+|+|.+|||||||||||||||||+|+|||||||||+||++||+.|+++|++.+ +++
T Consensus 1333 ~~~i~~lp~GLdt~v~e~G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~---------~~~ 1403 (1490)
T TIGR01271 1333 KSVIEQFPDKLDFVLVDGGYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSF---------SNC 1403 (1490)
T ss_pred HHHHHhCccccccccccCCCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHc---------CCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999876 555
Q ss_pred eEEEEEecCchhhhcCCEEEEEeCCEEEEecChhHHhhccCChHHHHHHHHhh
Q 048639 1084 TTQITVAHRLATVINSDVIVVMDKGEVVEMGSHSTLVAESQGVYSRLYQLQAF 1136 (1139)
Q Consensus 1084 tTvI~IaHrl~ti~~~DrI~vl~~G~ive~G~~~eLl~~~~g~f~~l~~~~~~ 1136 (1139)
| ||+||||++++.+||||+|||+|+|+|+|+|++|+++ +|.|++|++++..
T Consensus 1404 T-vI~IaHRl~ti~~~DrIlvL~~G~ivE~g~p~~Ll~~-~~~f~~l~~~~~~ 1454 (1490)
T TIGR01271 1404 T-VILSEHRVEALLECQQFLVIEGSSVKQYDSIQKLLNE-TSLFKQAMSAADR 1454 (1490)
T ss_pred E-EEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHHHcC-CcHHHHHHHHhCh
Confidence 5 9999999999999999999999999999999999975 8999999987653
No 9
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=3.7e-108 Score=946.97 Aligned_cols=573 Identities=37% Similarity=0.561 Sum_probs=536.8
Q ss_pred hhhHHHHhhchhhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-chhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 550 IFFRIWFCLNERELLRLVVGTVAAAFSGISKPLFGFFIITIGVAYYD-PQAKQEVGWYSLAFSLVGLFSLFTHTLQHYFF 628 (1139)
Q Consensus 550 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (1139)
.++++ +.+.++.++.+..+.++..+........+.+.+++++.++. .+........+...+++.+...++.+++.+++
T Consensus 134 ~~~rl-~~l~~~~~~~l~~a~~~l~vss~~~~~iP~~~G~~id~~~~~~~~~~~~~~~~~~l~~l~~~~a~~~~~r~~~~ 212 (716)
T KOG0058|consen 134 LLKRL-LGLLKPEWKWLVAAFVLLLVSSLINMFIPYYLGKLIDTISEGDDSADALKRACTILLGLFLIGALANAIRGGLL 212 (716)
T ss_pred HHHHH-HHHhchhHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35566 66788888888888888888877787888888888877665 33333344466777788888999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcccccCCCChhHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Q 048639 629 GVVGEKAMTNLRRTLYTGVLRNEIAWFEKPQNDAGSLTSRIVSDTSMVKAIISDRMSVIVQCISSILIATIVSLVVDWRM 708 (1139)
Q Consensus 629 ~~~~~~~~~~l~~~l~~~ll~~~~~ff~~~~~~~G~i~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l 708 (1139)
...+++...++|..+|+++++++++||| .|.+|++++|++.|...+.+.++..+...+.+.+..++++.+++..+|.+
T Consensus 213 ~~a~~rv~~rlR~~lF~sil~QdiaFFD--~nktGeL~SRLtsD~~~vs~svs~nls~~lR~~~~~~g~~~~M~~~S~~L 290 (716)
T KOG0058|consen 213 QYAGERVVARLRTDLFRSLLRQDIAFFD--ENKTGELISRLTSDTQIVSNSVSQNLSDGLRNLVQGFGGLGFMFSLSWRL 290 (716)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhc--cCCccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhhhHHH
Confidence 9999999999999999999999999999 78899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHHHHHHhhcchHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 709 ALVAWAVMPCHFIGGLIQAKSAQGFSGDSAAAHTEFISLTSESASNIRTVASFCHEENILQKAKISLEKTKRSSRKESIK 788 (1139)
Q Consensus 709 ~lv~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 (1139)
+++.++.+|++++...++.++.++++++.++..+++.....|.+++++|||+|+.|+...++|.+.++...+..++....
T Consensus 291 tlv~~i~~P~v~~~~~~yG~~~rklS~~~Q~a~A~a~~vaeE~ls~~rTVRsfa~E~~E~~ry~~~l~~~~~i~~k~a~a 370 (716)
T KOG0058|consen 291 TLVTLIVVPIVALVAKIYGKYLRKLSKQTQDALARANQVAEEVLSAMRTVRSFAAEEQEVKRYNKKLREVLKLSKKEAVA 370 (716)
T ss_pred HHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC
Q 048639 789 YGVIQGFSLCLWNIAHAVALWYTAVLIDKKQATFRDGIRAYQIFSLTVPSITELWTLIPTVISAITVLAPAFEILDRKTE 868 (1139)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~ 868 (1139)
...+++.......+....++|||+.++..|.++.|++..++++......++..+...+.++.++.++.+|++++++++|.
T Consensus 371 ~~~f~~~~~~~~~~~~~siL~~Gg~Lv~~g~mt~g~L~sFllY~~~~g~sl~~ls~~ys~lmkgvGAs~rvFel~dr~P~ 450 (716)
T KOG0058|consen 371 YGIFFGSTNLLGNLAVLSILFYGGHLVLTGSLTSGALSSFLLYQVQLGSSLSGLSSFYSELMKGVGASERVFELMDRKPR 450 (716)
T ss_pred hhHhHhHHHHHHhHHHHHHHHhccchhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHhccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCCCCCCCccccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEC
Q 048639 869 IEPDAPESSESGRIKGRIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILID 948 (1139)
Q Consensus 869 ~~~~~~~~~~~~~~~g~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~id 948 (1139)
.+++ .... |....|.|+|+||+|+||+||+.|||+|+||+|+|||.||+||||||||||++++|.|||+|++|+|++|
T Consensus 451 i~~~-G~~~-p~~~~G~IeF~~VsFaYP~Rp~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~PtsG~IllD 528 (716)
T KOG0058|consen 451 IPLT-GTLA-PDHLQGVIEFEDVSFAYPTRPDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPTSGRILLD 528 (716)
T ss_pred CCCC-Cccc-cccccceEEEEEeeeecCCCCCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCCeEEEC
Confidence 7655 2211 2257899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCCCChHHHhhhceEEccccccccccHHHHhccCCCcCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChH
Q 048639 949 GKGIKEYNLRRLRSQIGLVQQEPLLFSCSIRNNICYGNEAASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGG 1028 (1139)
Q Consensus 949 G~di~~~~l~~lR~~i~~V~Qdp~LF~gTIreNL~~~~~~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgG 1028 (1139)
|+||++++.++||++||+|.|||+||+|||+|||.||.+.++||||.+|+++++.|+||.++|+||||.|||+|.+||||
T Consensus 529 G~~i~~~~~~~lr~~Ig~V~QEPvLFs~sI~eNI~YG~~~~t~e~i~~AAk~ANah~FI~~~p~gY~T~VGEkG~qLSGG 608 (716)
T KOG0058|consen 529 GVPISDINHKYLRRKIGLVGQEPVLFSGSIRENIAYGLDNATDEEIEAAAKMANAHEFITNFPDGYNTVVGEKGSQLSGG 608 (716)
T ss_pred CeehhhcCHHHHHHHeeeeeccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCccccccch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhcCCEEEEEeCC
Q 048639 1029 QKQRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVINSDVIVVMDKG 1108 (1139)
Q Consensus 1029 QrQrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~~DrI~vl~~G 1108 (1139)
|||||||||||+|||+||||||||||||.++|..||++|.+.. +++ |||+|||||+||++||+|+|+|+|
T Consensus 609 QKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~---------~~r-TVlvIAHRLSTV~~Ad~Ivvi~~G 678 (716)
T KOG0058|consen 609 QKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLM---------QGR-TVLVIAHRLSTVRHADQIVVIDKG 678 (716)
T ss_pred HHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhh---------cCC-eEEEEehhhhHhhhccEEEEEcCC
Confidence 9999999999999999999999999999999999999998765 444 599999999999999999999999
Q ss_pred EEEEecChhHHhhccCChHHHHHHHHhhc
Q 048639 1109 EVVEMGSHSTLVAESQGVYSRLYQLQAFS 1137 (1139)
Q Consensus 1109 ~ive~G~~~eLl~~~~g~f~~l~~~~~~~ 1137 (1139)
+|+|.|+|+||+++++|.|++|++.|...
T Consensus 679 ~V~E~G~h~eLl~~~~gly~~Lv~~q~~~ 707 (716)
T KOG0058|consen 679 RVVEMGTHDELLSKPNGLYAKLVQRQLDS 707 (716)
T ss_pred eEEecccHHHHhhCcccHHHHHHHHhccc
Confidence 99999999999999889999999999765
No 10
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.1e-97 Score=860.12 Aligned_cols=491 Identities=38% Similarity=0.610 Sum_probs=471.1
Q ss_pred HHHHHHHHHHHHHHHH---------HcCCcccccccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 048639 5 KLILSWHPKGNRVLMK---------IGGEVGAFDTDLSTGKVITGVSSHMSVIRDAIGEKLGHFLSSFATFFSGVLIAVI 75 (1139)
Q Consensus 5 ~~~~~~~~~~~~~~~~---------l~~~~~~f~~~~~~G~l~~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~ 75 (1139)
...+|+.++++|++.| ++++++|||.+ .+|+++||++.|+..+.+.+...+...+.+.+..++++++|++
T Consensus 207 ~r~~~~~~a~~rv~~rlR~~lF~sil~QdiaFFD~n-ktGeL~SRLtsD~~~vs~svs~nls~~lR~~~~~~g~~~~M~~ 285 (716)
T KOG0058|consen 207 IRGGLLQYAGERVVARLRTDLFRSLLRQDIAFFDEN-KTGELISRLTSDTQIVSNSVSQNLSDGLRNLVQGFGGLGFMFS 285 (716)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccC-CccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhh
Confidence 3467899999999998 89999999998 8999999999999999999999999999999999999999999
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Q 048639 76 CCWEVSLLIFLVVPMILVIGATYTKRMNAVSATKLLYLSEATSMIEQTISQIKTVFAFVGERSEIKSFSDCMDKQIIISR 155 (1139)
Q Consensus 76 ~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~ 155 (1139)
++|+++++.++.+|+++.+..+++++.++.+++.|+..++.+...+|.+++|||||+|+.|+.+.++|.+..++..+..+
T Consensus 286 ~S~~Ltlv~~i~~P~v~~~~~~yG~~~rklS~~~Q~a~A~a~~vaeE~ls~~rTVRsfa~E~~E~~ry~~~l~~~~~i~~ 365 (716)
T KOG0058|consen 286 LSWRLTLVTLIVVPIVALVAKIYGKYLRKLSKQTQDALARANQVAEEVLSAMRTVRSFAAEEQEVKRYNKKLREVLKLSK 365 (716)
T ss_pred hhHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhhhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 048639 156 GEALIKGVGLGMFQSVTFCCWALIIWVGAVVVTAKRSTGGEVLAAVMSILFGAIALTYAAPDMQVFNQAKAAGFEIFQVI 235 (1139)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~l~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ri~~~l 235 (1139)
|.....+.+.....+..++..+.++++|++++..|.+|.|.+.+|++|......++..+...+..++++..|.+|++|++
T Consensus 366 k~a~a~~~f~~~~~~~~~~~~~siL~~Gg~Lv~~g~mt~g~L~sFllY~~~~g~sl~~ls~~ys~lmkgvGAs~rvFel~ 445 (716)
T KOG0058|consen 366 KEAVAYGIFFGSTNLLGNLAVLSILFYGGHLVLTGSLTSGALSSFLLYQVQLGSSLSGLSSFYSELMKGVGASERVFELM 445 (716)
T ss_pred HHHHHhhHhHhHHHHHHhHHHHHHHHhccchhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHh
Confidence 99988889888888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCccCCCCccccCCCccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccE
Q 048639 236 QRKPRISYSSKGKELEKIDGNIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGD 315 (1139)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~ 315 (1139)
+.+|..+.. ....+....+.|+|+||+|+||.+++.++|+|+||+|+|||.||+||||||||||++++|.++|+|++|+
T Consensus 446 dr~P~i~~~-G~~~p~~~~G~IeF~~VsFaYP~Rp~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~PtsG~ 524 (716)
T KOG0058|consen 446 DRKPRIPLT-GTLAPDHLQGVIEFEDVSFAYPTRPDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPTSGR 524 (716)
T ss_pred ccCCCCCCC-CccccccccceEEEEEeeeecCCCCCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCCe
Confidence 999987544 2222235678999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEECCccCCCCCHHHHhcceEEEecCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCC
Q 048639 316 ILIDSLNIKDLDLKSLRKNIGAVSQEPSLFTGSLMDNIKVGNMDADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQ 395 (1139)
Q Consensus 316 i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~ 395 (1139)
|.+||+||++++..+||++||+|.|||.||++||+|||.||.+.+++|++..|++++++|+||..+|+||||.+||+|..
T Consensus 525 IllDG~~i~~~~~~~lr~~Ig~V~QEPvLFs~sI~eNI~YG~~~~t~e~i~~AAk~ANah~FI~~~p~gY~T~VGEkG~q 604 (716)
T KOG0058|consen 525 ILLDGVPISDINHKYLRRKIGLVGQEPVLFSGSIRENIAYGLDNATDEEIEAAAKMANAHEFITNFPDGYNTVVGEKGSQ 604 (716)
T ss_pred EEECCeehhhcCHHHHHHHeeeeeccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhccCEEEEEeCcEEEEec
Q 048639 396 LSGGQKQRIAIARAIVKNPPILLLDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVNADMIAVVEDGQVTETG 475 (1139)
Q Consensus 396 LSgGqkqRi~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g 475 (1139)
|||||||||||||||++||.||||||+|||||+++|..+++++.+..+++|||+|+||++++++||+|+|+++|+++|.|
T Consensus 605 LSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~~rTVlvIAHRLSTV~~Ad~Ivvi~~G~V~E~G 684 (716)
T KOG0058|consen 605 LSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQGRTVLVIAHRLSTVRHADQIVVIDKGRVVEMG 684 (716)
T ss_pred ccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhcCCeEEEEehhhhHhhhccEEEEEcCCeEEecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Chhhhhccc-hHHHHHHhhccCC
Q 048639 476 THHSLLQTS-DFYNRLFTMQNLR 497 (1139)
Q Consensus 476 ~~~~l~~~~-~~~~~~~~~~~~~ 497 (1139)
+|+||+++. +.|.++.+.|...
T Consensus 685 ~h~eLl~~~~gly~~Lv~~q~~~ 707 (716)
T KOG0058|consen 685 THDELLSKPNGLYAKLVQRQLDS 707 (716)
T ss_pred cHHHHhhCcccHHHHHHHHhccc
Confidence 999999987 8999999877643
No 11
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.2e-95 Score=886.44 Aligned_cols=575 Identities=38% Similarity=0.617 Sum_probs=535.7
Q ss_pred chhhHHHHhhchhhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCchh---hhhHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 549 TIFFRIWFCLNERELLRLVVGTVAAAFSGISKPLFGFFIITIGVAYYDPQA---KQEVGWYSLAFSLVGLFSLFTHTLQH 625 (1139)
Q Consensus 549 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (1139)
..+..++.+..+..+..+.+|.+.+.+.++..|++..+++...+.+..... ......+++.|+.+++..++..+++.
T Consensus 13 ~~~~~lf~~a~~~D~~Lm~~G~i~a~~~G~~~P~~~ii~g~~~~~~~~~~~~~~~~~~~~~~l~~~~lg~~~~~~~~~q~ 92 (1228)
T KOG0055|consen 13 VSFFKLFRFADRFDYLLMILGSIGAIAHGLGLPLMSIIFGKLTDVLGDNTNKIASSEVSKVALYFVYLGVGVFISGFIQV 92 (1228)
T ss_pred cchHHheeccchhhHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445555444455678888999999999999999999999988877654221 13455688889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCcccccCCCChhHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 048639 626 YFFGVVGEKAMTNLRRTLYTGVLRNEIAWFEKPQNDAGSLTSRIVSDTSMVKAIISDRMSVIVQCISSILIATIVSLVVD 705 (1139)
Q Consensus 626 ~~~~~~~~~~~~~l~~~l~~~ll~~~~~ff~~~~~~~G~i~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 705 (1139)
.++.+.++|...++|.+.++.++|++++|||. +..|++..|+++|++.+++.+++.+..+++.+.++++++++.|+..
T Consensus 93 ~c~~~~geRq~~riR~~yl~~iLrQdi~~fD~--~~~g~~~~~l~~d~~~I~d~~geKvg~~i~~~~~fi~g~ii~F~~~ 170 (1228)
T KOG0055|consen 93 SCWMRTGERQTARIRSKYLKAILRQDIGWFDT--NSTGELVTRLSDDIELIQDAIGEKVGNFIQLLATFIAGFVIGFYYG 170 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCccceeec--ccccceEEEecCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999994 5569999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHHHHHHhhcchHHHHhhcchHHHHHHHHHHHHHHHHHHHHH
Q 048639 706 WRMALVAWAVMPCHFIGGLIQAKSAQGFSGDSAAAHTEFISLTSESASNIRTVASFCHEENILQKAKISLEKTKRSSRKE 785 (1139)
Q Consensus 706 ~~l~lv~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~ 785 (1139)
|+++++++.+.|+..+...+..+...+.+.+.+...++..+...|++.+++||.+|+.|+...++|.+.++...+...+.
T Consensus 171 W~Ltlv~l~~~Pli~~~g~~~a~~~~~~t~ke~~~ya~Ag~iaEe~i~~iRTV~af~gq~~e~~ry~~~L~~~~k~gi~~ 250 (1228)
T KOG0055|consen 171 WKLTLVMLSFIPLIAIAGGLLARFLSKLTEKEQEAYAKAGSIAEEVISSIRTVYAFNGEKKEIERYSKALENALKFGIKK 250 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999888888888899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 048639 786 SIKYGVIQGFSLCLWNIAHAVALWYTAVLIDKKQATFRDGIRAYQIFSLTVPSITELWTLIPTVISAITVLAPAFEILDR 865 (1139)
Q Consensus 786 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~ 865 (1139)
..+.+...++..++.+..+++.+|||..++..+..++|.++.++..+......+++....+..+..+..++.++++.+++
T Consensus 251 g~~~G~~~G~~~~~~~~~~a~~~WyG~~li~~~~~~~g~v~~v~~~vl~g~~sLgqa~p~l~~f~~a~~aa~~I~~~i~~ 330 (1228)
T KOG0055|consen 251 GLFKGLGLGFTFFLLFASYALAFWYGSTLILNGGYNGGDVITVFFSVLIGGMSLGQASPHLSAFAKARAAAYRIFETIDR 330 (1228)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeehhhhhhhhhccccchHHHhccccchHHHHHHhcC
Confidence 99999999999999999999999999999999999999999888888899999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCccccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEE
Q 048639 866 KTEIEPDAPESSESGRIKGRIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGII 945 (1139)
Q Consensus 866 ~~~~~~~~~~~~~~~~~~g~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I 945 (1139)
.|+.++...........+|.|+|+||+|+||+||+.++|+|+||+|++||.|||||+|||||||++++|.|||+|++|+|
T Consensus 331 ~~~i~~~~~~~~~~~~~~g~ief~nV~FsYPsRpdv~Il~g~sl~i~~G~~valVG~SGsGKST~i~LL~RfydP~~G~V 410 (1228)
T KOG0055|consen 331 KPSIDPYSKGGRVLSSIKGEIEFRNVCFSYPSRPDVKILKGVSLKIPSGQTVALVGPSGSGKSTLIQLLARFYDPTSGEV 410 (1228)
T ss_pred CCCCCcccccCCcccccccceEEEEEEecCCCCCcchhhCCeEEEeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCceE
Confidence 88877654223333447899999999999999999999999999999999999999999999999999999999999999
Q ss_pred EECCcccCCCChHHHhhhceEEccccccccccHHHHhccCCCcCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCC
Q 048639 946 LIDGKGIKEYNLRRLRSQIGLVQQEPLLFSCSIRNNICYGNEAASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQL 1025 (1139)
Q Consensus 946 ~idG~di~~~~l~~lR~~i~~V~Qdp~LF~gTIreNL~~~~~~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~L 1025 (1139)
+|||.|+++++.++||++||+|.|||+||++||+|||.||+|++|++++.+|++.++.++||.++|+||||.+||+|.+|
T Consensus 411 ~idG~di~~~~~~~lr~~iglV~QePvlF~~tI~eNI~~G~~dat~~~i~~a~k~ana~~fi~~lp~g~~T~vge~g~qL 490 (1228)
T KOG0055|consen 411 LIDGEDIRNLNLKWLRSQIGLVSQEPVLFATTIRENIRYGKPDATREEIEEAAKAANAHDFILKLPDGYDTLVGERGVQL 490 (1228)
T ss_pred EEcCccchhcchHHHHhhcCeeeechhhhcccHHHHHhcCCCcccHHHHHHHHHHccHHHHHHhhHHhhcccccCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhcCCEEEEE
Q 048639 1026 SGGQKQRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVINSDVIVVM 1105 (1139)
Q Consensus 1026 SgGQrQrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~~DrI~vl 1105 (1139)
||||||||||||||+|+|+|||||||||+||+++|+.||++|++.. +++| .|+|||||+||+++|+|+||
T Consensus 491 SGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~---------~grT-TivVaHRLStIrnaD~I~v~ 560 (1228)
T KOG0055|consen 491 SGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALDKAS---------KGRT-TIVVAHRLSTIRNADKIAVM 560 (1228)
T ss_pred ChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHhh---------cCCe-EEEEeeehhhhhccCEEEEE
Confidence 9999999999999999999999999999999999999999999875 5665 89999999999999999999
Q ss_pred eCCEEEEecChhHHhhccCChHHHHHHHHhh
Q 048639 1106 DKGEVVEMGSHSTLVAESQGVYSRLYQLQAF 1136 (1139)
Q Consensus 1106 ~~G~ive~G~~~eLl~~~~g~f~~l~~~~~~ 1136 (1139)
++|+|||.|+|+||++.+ |.|++|++.|..
T Consensus 561 ~~G~IvE~G~h~ELi~~~-G~Y~~lv~~Q~~ 590 (1228)
T KOG0055|consen 561 EEGKIVEQGTHDELIALG-GIYSSLVRLQEL 590 (1228)
T ss_pred ECCEEEEecCHHHHHhcc-chHHHHHHHHhh
Confidence 999999999999999985 999999998853
No 12
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=4.3e-92 Score=852.55 Aligned_cols=553 Identities=33% Similarity=0.538 Sum_probs=504.2
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 564 LRLVVGTVAAAFSGISKPLFGFFIITIGVAYYDPQAKQEVGWYSLAFSLVGLFSLFTHTLQHYFFGVVGEKAMTNLRRTL 643 (1139)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 643 (1139)
..+++..++..+.++..|++..++. +..........+......+++++++..++.+++.+.+.+.+.+....+-.++
T Consensus 157 ~~v~~~sl~l~i~~l~~p~~~q~vi---D~Vl~~~~~~tL~vl~ig~~~~~l~~~~l~~lr~~~~~~~~~rld~~l~~~~ 233 (709)
T COG2274 157 FEVLLASLLLQLLALATPLFSQIVI---DKVLPDASRSTLTVLAIGLLLAALFEALLRLLRTYLIAHLGKRLDLELSGRF 233 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH---HhhhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 3444445555555666666554443 3333233344555667778888899999999999999999999999999999
Q ss_pred HHHHHcCCCcccccCCCChhHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Q 048639 644 YTGVLRNEIAWFEKPQNDAGSLTSRIVSDTSMVKAIISDRMSVIVQCISSILIATIVSLVVDWRMALVAWAVMPCHFIGG 723 (1139)
Q Consensus 644 ~~~ll~~~~~ff~~~~~~~G~i~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~~~~~p~~~~~~ 723 (1139)
|+|++++|++||. .+++|++++|+ +|.+.+++++.......+..+..+++.++++++++|.+++++++.+|++++..
T Consensus 234 ~~hll~Lpl~~f~--~r~~Ge~~sR~-~el~~Ir~flt~~~l~~iiD~~~~~i~l~vm~~ys~~L~li~l~~~~l~~l~~ 310 (709)
T COG2274 234 FRHLLRLPLSYFE--KRSVGEIISRV-RELEQIREFLTGSILTLIIDLLFALIFLAVMFLYSWKLTLIVLAAIPLNVLIT 310 (709)
T ss_pred HHHHHcCcHHHcc--CCChhhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999 67899999998 68999999999888888888888888999999999999999999999999999
Q ss_pred HHHHHhhhchhhhHHHHHHHHHHHHHHhhcchHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 724 LIQAKSAQGFSGDSAAAHTEFISLTSESASNIRTVASFCHEENILQKAKISLEKTKRSSRKESIKYGVIQGFSLCLWNIA 803 (1139)
Q Consensus 724 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 803 (1139)
.+..+..++..++..+..++.++++.|++.|++|||+.+.|.++.++|++...+..+...+..........+...+..+.
T Consensus 311 ~~~~~~l~~~~~~~~~~~a~~~s~lvE~i~gi~tvK~~~~e~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 390 (709)
T COG2274 311 LIFQPLLRRKTRKLIEESAEQQSFLVETIKGIETVKALAAEPRFRSQWDNRLAKQVNIGFKTEKLALILNTIKSLLQQLS 390 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 99999999888888888999999999999999999999999999999999999999999999988888888899999999
Q ss_pred HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCcc
Q 048639 804 HAVALWYTAVLIDKKQATFRDGIRAYQIFSLTVPSITELWTLIPTVISAITVLAPAFEILDRKTEIEPDAPESSESGRIK 883 (1139)
Q Consensus 804 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~ 883 (1139)
.++++|+|++++..|.+|+|.++++.++...+..++..+...+.++.....+.+|+.++++.++|.+.+.. ....+...
T Consensus 391 ~v~iL~~G~~lVl~~~lTlG~LiAf~~l~~~f~~pi~~L~~~~~~~q~~~~~~~rL~dil~~~~E~~~~~~-~~~~~~~~ 469 (709)
T COG2274 391 SVLILWFGAILVLEGELTLGQLVAFNMLAGYFISPITRLSQLWTDFQQAKVALERLGDILDTPPEQEGDKT-LIHLPKLQ 469 (709)
T ss_pred HHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccc-cccccccC
Confidence 99999999999999999999999999999999999999999999999999999999999998887554321 12345568
Q ss_pred ccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhh
Q 048639 884 GRIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQ 963 (1139)
Q Consensus 884 g~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~ 963 (1139)
|+|+|+||+|+|+.+ ++++|+|+||+|+|||+|||||+||||||||+++|.|+|+|++|+|++||+|+++++++.+|++
T Consensus 470 g~I~~~nvsf~y~~~-~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~~G~I~~dg~dl~~i~~~~lR~~ 548 (709)
T COG2274 470 GEIEFENVSFRYGPD-DPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQQGRILLDGVDLNDIDLASLRRQ 548 (709)
T ss_pred ceEEEEEEEEEeCCC-CcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEeHHhcCHHHHHhh
Confidence 999999999999755 3479999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEccccccccccHHHHhccCCCcCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhcCCC
Q 048639 964 IGLVQQEPLLFSCSIRNNICYGNEAASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIARTLLKRP 1043 (1139)
Q Consensus 964 i~~V~Qdp~LF~gTIreNL~~~~~~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalARALlr~p 1043 (1139)
|+|||||++||+|||||||++++|++++||+++||+.+++|+||.++|.||||+|||+|.+|||||||||+|||||++||
T Consensus 549 ig~V~Q~~~Lf~gSI~eNi~l~~p~~~~e~i~~A~~~ag~~~fI~~lP~gy~t~v~E~G~~LSGGQrQrlalARaLl~~P 628 (709)
T COG2274 549 VGYVLQDPFLFSGSIRENIALGNPEATDEEIIEAAQLAGAHEFIENLPMGYDTPVGEGGANLSGGQRQRLALARALLSKP 628 (709)
T ss_pred eeEEcccchhhcCcHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCCCCHHHHHHHHHHHHhccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhcCCEEEEEeCCEEEEecChhHHhhcc
Q 048639 1044 AIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVINSDVIVVMDKGEVVEMGSHSTLVAES 1123 (1139)
Q Consensus 1044 ~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~~DrI~vl~~G~ive~G~~~eLl~~~ 1123 (1139)
+||||||||||||++||+.|.+.|.+.. .++ |+|+||||++++++||||+|||+|+|+|+|+|+||++.
T Consensus 629 ~ILlLDEaTSaLD~~sE~~I~~~L~~~~---------~~~-T~I~IaHRl~ti~~adrIiVl~~Gkiv~~gs~~ell~~- 697 (709)
T COG2274 629 KILLLDEATSALDPETEAIILQNLLQIL---------QGR-TVIIIAHRLSTIRSADRIIVLDQGKIVEQGSHEELLAQ- 697 (709)
T ss_pred CEEEEeCcccccCHhHHHHHHHHHHHHh---------cCC-eEEEEEccchHhhhccEEEEccCCceeccCCHHHHHHh-
Confidence 9999999999999999999999999875 344 59999999999999999999999999999999999997
Q ss_pred CChHHHHHHHHh
Q 048639 1124 QGVYSRLYQLQA 1135 (1139)
Q Consensus 1124 ~g~f~~l~~~~~ 1135 (1139)
+|.|+++++.|.
T Consensus 698 ~g~y~~l~~~q~ 709 (709)
T COG2274 698 GGLYARLYQQQE 709 (709)
T ss_pred cChHHHHHhccC
Confidence 999999998763
No 13
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=6e-86 Score=810.41 Aligned_cols=552 Identities=36% Similarity=0.556 Sum_probs=482.1
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 565 RLVVGTVAAAFSGISKPLFGFFIITIGVAYYDPQAKQEVGWYSLAFSLVGLFSLFTHTLQHYFFGVVGEKAMTNLRRTLY 644 (1139)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 644 (1139)
.+..+.++..+........++++...++... ........+...++++.++..++.+...++..+.+.+...++|.+++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~lr~~~~ 92 (567)
T COG1132 15 LLLLAILLLLLSALLSLLLPLLIGRIIDALL--ADLGELLELLLLLLLLALLGGVLRALQSYLGSRLGQKIVADLRRDLF 92 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444444444444555555554443 11122333445555555677777778888888888999999999999
Q ss_pred HHHHcCCCcccccCCCChhHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Q 048639 645 TGVLRNEIAWFEKPQNDAGSLTSRIVSDTSMVKAIISDRMSVIVQCISSILIATIVSLVVDWRMALVAWAVMPCHFIGGL 724 (1139)
Q Consensus 645 ~~ll~~~~~ff~~~~~~~G~i~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~~~~~p~~~~~~~ 724 (1139)
+++++.|++||+ .+++|++++|+++|++.++..+......+...++.+++.+++++..+|.+++++++..|++.+...
T Consensus 93 ~~l~~~~~~~~~--~~~~g~l~~~~t~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~ 170 (567)
T COG1132 93 EKLLRLPLSFFD--KAKSGDLISRLTNDVEAVSNLVSTVLVLVFTSILLLIGSLVLLFSLSWRLALILLLILPLLALVLS 170 (567)
T ss_pred HHHHhCCHHHhC--cCCcchHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 999999999999 678999999999999999999999866677678889999999999999999999999888888877
Q ss_pred HHHHhhhchhhhHHHHHHHHHHHHHHhhcchHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 725 IQAKSAQGFSGDSAAAHTEFISLTSESASNIRTVASFCHEENILQKAKISLEKTKRSSRKESIKYGVIQGFSLCLWNIAH 804 (1139)
Q Consensus 725 ~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 804 (1139)
+..++.+...+..++...+..+.+.|+++|+++||+|+.++...+++.+..+...+...+.....+....+...+..+..
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (567)
T COG1132 171 LLARKSRKLSRRVREALGELNARLLESLSGIRVIKAFGAEDRELKRFEEANEELRRANLRASRLEALLAPLMLLLSSLGT 250 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77766677778888888899999999999999999999999999999988888888777777777777777788888899
Q ss_pred HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCccc
Q 048639 805 AVALWYTAVLIDKKQATFRDGIRAYQIFSLTVPSITELWTLIPTVISAITVLAPAFEILDRKTEIEPDAPESSESGRIKG 884 (1139)
Q Consensus 805 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~g 884 (1139)
++.++++..++..+.+++|.+.+++.+......++..+......+..+..+.+|++++++.+++....+.. .....|
T Consensus 251 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~---~~~~~~ 327 (567)
T COG1132 251 VLVLALGGFLVLSGSLTVGALAAFILYLLRLLTPILQLGEVVSLLQRASAAAERLFELLDEEPEVEDPPDP---LKDTIG 327 (567)
T ss_pred HHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCC---CCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999986653322111 223457
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhc
Q 048639 885 RIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQI 964 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i 964 (1139)
.|+|+||+|+|++ +.++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|+|||+||++++.++||++|
T Consensus 328 ~I~f~~vsf~y~~--~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~~G~I~idg~dI~~i~~~~lr~~I 405 (567)
T COG1132 328 SIEFENVSFSYPG--KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPTSGEILIDGIDIRDISLDSLRKRI 405 (567)
T ss_pred eEEEEEEEEEcCC--CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCEehhhcCHHHHHHhc
Confidence 8999999999973 45799999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEccccccccccHHHHhccCCCcCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhcCCCC
Q 048639 965 GLVQQEPLLFSCSIRNNICYGNEAASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIARTLLKRPA 1044 (1139)
Q Consensus 965 ~~V~Qdp~LF~gTIreNL~~~~~~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalARALlr~p~ 1044 (1139)
++|||||+||+|||++||++|+|+++|||+++|++.++++|+|.++|+||||.|||+|.+||||||||||||||++|+||
T Consensus 406 ~~V~Qd~~LF~~TI~~NI~~g~~~at~eei~~a~k~a~~~d~I~~lp~g~dt~vge~G~~LSgGQrQrlaiARall~~~~ 485 (567)
T COG1132 406 GIVSQDPLLFSGTIRENIALGRPDATDEEIEEALKLANAHEFIANLPDGYDTIVGERGVNLSGGQRQRLAIARALLRNPP 485 (567)
T ss_pred cEEcccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCcccccceecCCCccCCHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhcCCEEEEEeCCEEEEecChhHHhhccC
Q 048639 1045 IMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVINSDVIVVMDKGEVVEMGSHSTLVAESQ 1124 (1139)
Q Consensus 1045 ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~~DrI~vl~~G~ive~G~~~eLl~~~~ 1124 (1139)
|||||||||+||++||+.|++++++.. +++| +|+||||++|+++||+|+|||+|+|+|+|+|+||+++ +
T Consensus 486 ILILDEaTSalD~~tE~~I~~~l~~l~---------~~rT-~iiIaHRlsti~~aD~IiVl~~G~i~e~G~h~eLl~~-~ 554 (567)
T COG1132 486 ILILDEATSALDTETEALIQDALKKLL---------KGRT-TLIIAHRLSTIKNADRIIVLDNGRIVERGTHEELLAK-G 554 (567)
T ss_pred EEEEeccccccCHHhHHHHHHHHHHHh---------cCCE-EEEEeccHhHHHhCCEEEEEECCEEEEecCHHHHHHc-C
Confidence 999999999999999999999998664 4445 7889999999999999999999999999999999997 9
Q ss_pred ChHHHHHHHHhh
Q 048639 1125 GVYSRLYQLQAF 1136 (1139)
Q Consensus 1125 g~f~~l~~~~~~ 1136 (1139)
|.|++||+.|..
T Consensus 555 g~y~~l~~~~~~ 566 (567)
T COG1132 555 GLYARLYQAQGG 566 (567)
T ss_pred CHHHHHHHHhhc
Confidence 999999998864
No 14
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=4.5e-85 Score=807.56 Aligned_cols=564 Identities=21% Similarity=0.272 Sum_probs=470.9
Q ss_pred HhhchhhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-chhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 556 FCLNERELLRLVVGTVAAAFSGISKPLFGFFIITIGVAYYD-PQAKQEVGWYSLAFSLVGLFSLFTHTLQHYFFGVVGEK 634 (1139)
Q Consensus 556 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 634 (1139)
+.+.++.++.+++++++.++..++....++++...++.... .........+..+++++.++..++.+++.++....+.+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (588)
T PRK11174 14 KQQSKPAKRWLNLSILLGFLSGLLLIAQAWLLATILQALIIENIPREALLPPFILLILLFVLRALLAWLRERVGFKAGQH 93 (588)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34456666666667777777777766677777766664431 11112233344555566677788888899999999999
Q ss_pred HHHHHHHHHHHHHHcCCCcccccCCCChhHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q 048639 635 AMTNLRRTLYTGVLRNEIAWFEKPQNDAGSLTSRIVSDTSMVKAIISDRMSVIVQCISSILIATIVSLVVDWRMALVAWA 714 (1139)
Q Consensus 635 ~~~~l~~~l~~~ll~~~~~ff~~~~~~~G~i~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~~~ 714 (1139)
...++|.++|++++++|++||+ ++++|++++|+++|++.+++.+...+..++..++.+++++++++.++|.+++++++
T Consensus 94 ~~~~lr~~~~~~ll~~~~~~~~--~~~~g~l~s~~~~dv~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~ 171 (588)
T PRK11174 94 IRQQIRQQVLDKLQQLGPAWIQ--GKPAGSWATLVLEQVEDMHDFYARYLPQMALAVLVPLLILIAVFPINWAAGLILLG 171 (588)
T ss_pred HHHHHHHHHHHHHHhcCchhhc--cCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999 67899999999999999999999999999999998888899999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhchhhhHHHHHHHHHHHHHHhhcchHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 715 VMPCHFIGGLIQAKSAQGFSGDSAAAHTEFISLTSESASNIRTVASFCHEENILQKAKISLEKTKRSSRKESIKYGVIQG 794 (1139)
Q Consensus 715 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 794 (1139)
.+|+.++...+..+..+...++.++...+..+.+.|.++|+++||+|++|+.+.+++.+..++..+...+..........
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (588)
T PRK11174 172 TAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGLETLRLFNRGEAETESIRSASEDFRQRTMEVLRMAFLSSA 251 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99988888777777777777777788888999999999999999999999999999999888888776666555554555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 048639 795 FSLCLWNIAHAVALWYTAVLIDKKQATFRDG---------IRAYQIFSLTVPSITELWTLIPTVISAITVLAPAFEILDR 865 (1139)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~ 865 (1139)
+...+..+..+++.++++..+. |.+++|.+ +.+..+......++..+...+..+..+..+.+|+.++++.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~-g~~t~G~l~~~~~~~~~~~~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~ 330 (588)
T PRK11174 252 VLEFFASISIALVAVYFGFSYL-GELNFGHYGTGVTLFAGFFVLILAPEFYQPLRDLGTFYHAKAQAVGAAESLVTFLET 330 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-cccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 5444444444444444444333 66666643 1222334455678888888999999999999999999986
Q ss_pred CCCCCCCCCCCCCCCCccccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEE
Q 048639 866 KTEIEPDAPESSESGRIKGRIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGII 945 (1139)
Q Consensus 866 ~~~~~~~~~~~~~~~~~~g~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I 945 (1139)
+++..+... ...+....+.|+|+||+|.|++ +.++|+|+||+|+|||++||||+||||||||+++|+|+| |++|+|
T Consensus 331 ~~~~~~~~~-~~~~~~~~~~i~~~~vsf~~~~--~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p~~G~I 406 (588)
T PRK11174 331 PLAHPQQGE-KELASNDPVTIEAEDLEILSPD--GKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-PYQGSL 406 (588)
T ss_pred CCcccCCCc-cccCCCCCceEEEEeeEEeccC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-CCCcEE
Confidence 543221111 1111112457999999988863 357999999999999999999999999999999999999 999999
Q ss_pred EECCcccCCCChHHHhhhceEEccccccccccHHHHhccCCCcCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCC
Q 048639 946 LIDGKGIKEYNLRRLRSQIGLVQQEPLLFSCSIRNNICYGNEAASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQL 1025 (1139)
Q Consensus 946 ~idG~di~~~~l~~lR~~i~~V~Qdp~LF~gTIreNL~~~~~~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~L 1025 (1139)
.+||+|+++++.+++|++|+||||||+||+|||||||.+++|+++|+|+++|++.++++++|.++|+||||.|||+|.+|
T Consensus 407 ~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~~TI~eNI~~g~~~~~~eei~~al~~a~l~~~i~~lp~G~dT~vge~G~~L 486 (588)
T PRK11174 407 KINGIELRELDPESWRKHLSWVGQNPQLPHGTLRDNVLLGNPDASDEQLQQALENAWVSEFLPLLPQGLDTPIGDQAAGL 486 (588)
T ss_pred EECCEecccCCHHHHHhheEEecCCCcCCCcCHHHHhhcCCCCCCHHHHHHHHHHhCHHHHHHhcccccccccccCCCCC
Confidence 99999999999999999999999999999999999999998899999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhcCCEEEEE
Q 048639 1026 SGGQKQRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVINSDVIVVM 1105 (1139)
Q Consensus 1026 SgGQrQrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~~DrI~vl 1105 (1139)
||||||||||||||+++|+|||||||||+||++||+.|+++|++.. +++ |+|+||||++++.+||+|+||
T Consensus 487 SGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~---------~~~-TvIiItHrl~~i~~aD~Iivl 556 (588)
T PRK11174 487 SVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAAS---------RRQ-TTLMVTHQLEDLAQWDQIWVM 556 (588)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHh---------CCC-EEEEEecChHHHHhCCEEEEE
Confidence 9999999999999999999999999999999999999999999764 344 599999999999999999999
Q ss_pred eCCEEEEecChhHHhhccCChHHHHHHHHhhc
Q 048639 1106 DKGEVVEMGSHSTLVAESQGVYSRLYQLQAFS 1137 (1139)
Q Consensus 1106 ~~G~ive~G~~~eLl~~~~g~f~~l~~~~~~~ 1137 (1139)
++|+|+|.|+|+||+++ +|.|+++++.|.++
T Consensus 557 ~~G~i~e~G~~~eL~~~-~~~y~~l~~~q~~~ 587 (588)
T PRK11174 557 QDGQIVQQGDYAELSQA-GGLFATLLAHRQEE 587 (588)
T ss_pred eCCeEeecCCHHHHHhc-chHHHHHHHHhhcC
Confidence 99999999999999986 89999999988754
No 15
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=7.4e-85 Score=815.89 Aligned_cols=563 Identities=34% Similarity=0.514 Sum_probs=490.4
Q ss_pred hhHHHHhhchhhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 551 FFRIWFCLNERELLRLVVGTVAAAFSGISKPLFGFFIITIGVAYYDPQAKQEVGWYSLAFSLVGLFSLFTHTLQHYFFGV 630 (1139)
Q Consensus 551 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 630 (1139)
++++ +.+.++.+..+...+++.++..+.....+++...+++................+++++.++..++.+++.+++.+
T Consensus 149 ~~~l-~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 227 (711)
T TIGR00958 149 LFRL-LGLSGRDWPWLISAFVFLTLSSLGEMFIPFYTGRVIDTLGGDKGPPALASAIFFMCLLSIASSVSAGLRGGSFNY 227 (711)
T ss_pred HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444 334455555566666666666666666667777766655432222222233444555666677888888999999
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCcccccCCCChhHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q 048639 631 VGEKAMTNLRRTLYTGVLRNEIAWFEKPQNDAGSLTSRIVSDTSMVKAIISDRMSVIVQCISSILIATIVSLVVDWRMAL 710 (1139)
Q Consensus 631 ~~~~~~~~l~~~l~~~ll~~~~~ff~~~~~~~G~i~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~l 710 (1139)
.+.+...++|.++|++++++|++||+ ++++|++++|+++|++.+++.+...+..++..++.+++++++++.++|.+++
T Consensus 228 ~~~~~~~~lr~~l~~~ll~~~~~~f~--~~~~G~i~srl~~Di~~i~~~~~~~~~~~l~~~~~~i~~~~~l~~~s~~l~l 305 (711)
T TIGR00958 228 TMARINLRIREDLFRSLLRQDLGFFD--ENKTGELTSRLSSDTQTMSRSLSLNVNVLLRNLVMLLGLLGFMLWLSPRLTM 305 (711)
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHc--CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 99999999999999999999999999 6789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHHHHHHhhcchHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 711 VAWAVMPCHFIGGLIQAKSAQGFSGDSAAAHTEFISLTSESASNIRTVASFCHEENILQKAKISLEKTKRSSRKESIKYG 790 (1139)
Q Consensus 711 v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 790 (1139)
++++.+|+.+++..+..++.++..++.++..++..+++.|+++|+++||+|+.|+.+.++|.+..++..+...+.....+
T Consensus 306 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (711)
T TIGR00958 306 VTLINLPLVFLAEKVFGKRYQLLSEELQEAVAKANQVAEEALSGMRTVRSFAAEEGEASRFKEALEETLQLNKRKALAYA 385 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999888888888888888888888888999999999999999999999999999999999998888777776666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCC
Q 048639 791 VIQGFSLCLWNIAHAVALWYTAVLIDKKQATFRDGIRAYQIFSLTVPSITELWTLIPTVISAITVLAPAFEILDRKTEIE 870 (1139)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~ 870 (1139)
....+...+..+..++.+++|++++..|.+++|.++++..+......++..+...+..+..+..+.+|+.++++.+++.+
T Consensus 386 ~~~~~~~~~~~~~~~~il~~g~~lv~~g~it~G~lva~~~~~~~l~~~l~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~ 465 (711)
T TIGR00958 386 GYLWTTSVLGMLIQVLVLYYGGQLVLTGKVSSGNLVSFLLYQEQLGEAVRVLSYVYSGMMQAVGASEKVFEYLDRKPNIP 465 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCC
Confidence 66666666677777888899999999999999999999999999999999999999999999999999999998765543
Q ss_pred CCCCCCCCCCCccccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCc
Q 048639 871 PDAPESSESGRIKGRIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGK 950 (1139)
Q Consensus 871 ~~~~~~~~~~~~~g~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~ 950 (1139)
... ...+.+..|.|+|+||+|+||++++.++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|++||+
T Consensus 466 ~~~--~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I~idg~ 543 (711)
T TIGR00958 466 LTG--TLAPLNLEGLIEFQDVSFSYPNRPDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPTGGQVLLDGV 543 (711)
T ss_pred CCC--CCCCCCCCCeEEEEEEEEECCCCCCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEECCE
Confidence 221 111223457899999999998766668999999999999999999999999999999999999999999999999
Q ss_pred ccCCCChHHHhhhceEEccccccccccHHHHhccCCCcCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHH
Q 048639 951 GIKEYNLRRLRSQIGLVQQEPLLFSCSIRNNICYGNEAASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQK 1030 (1139)
Q Consensus 951 di~~~~l~~lR~~i~~V~Qdp~LF~gTIreNL~~~~~~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQr 1030 (1139)
|+++++.+++|++|+||||||++|+|||||||.++.++++|++++++++.++++++++++|+||||.+||+|.+||||||
T Consensus 544 ~i~~~~~~~lr~~i~~v~Q~~~lF~gTIreNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGGQk 623 (711)
T TIGR00958 544 PLVQYDHHYLHRQVALVGQEPVLFSGSVRENIAYGLTDTPDEEIMAAAKAANAHDFIMEFPNGYDTEVGEKGSQLSGGQK 623 (711)
T ss_pred EHHhcCHHHHHhhceEEecCccccccCHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCCCccCCcccCCCCcCCHHHH
Confidence 99999999999999999999999999999999999888999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhcCCEEEEEeCCEE
Q 048639 1031 QRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVINSDVIVVMDKGEV 1110 (1139)
Q Consensus 1031 QrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~~DrI~vl~~G~i 1110 (1139)
||||||||++++|+|||||||||+||+++|+.|++ .. .. ++ +|+|+||||++++..||+|+||++|+|
T Consensus 624 QRlalARALl~~p~ILILDEpTSaLD~~te~~i~~-~~-~~---------~~-~TvIiItHrl~~i~~aD~IivL~~G~i 691 (711)
T TIGR00958 624 QRIAIARALVRKPRVLILDEATSALDAECEQLLQE-SR-SR---------AS-RTVLLIAHRLSTVERADQILVLKKGSV 691 (711)
T ss_pred HHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH-hh-cc---------CC-CeEEEEeccHHHHHhCCEEEEEECCEE
Confidence 99999999999999999999999999999999999 32 11 33 459999999999999999999999999
Q ss_pred EEecChhHHhhccCChHHHHH
Q 048639 1111 VEMGSHSTLVAESQGVYSRLY 1131 (1139)
Q Consensus 1111 ve~G~~~eLl~~~~g~f~~l~ 1131 (1139)
+|.|+|+||+++ +|.|++|+
T Consensus 692 ve~Gt~~eL~~~-~~~y~~lv 711 (711)
T TIGR00958 692 VEMGTHKQLMED-QGCYKHLV 711 (711)
T ss_pred EEeeCHHHHHhC-CCchHhcC
Confidence 999999999987 79999874
No 16
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=1.5e-85 Score=795.52 Aligned_cols=485 Identities=33% Similarity=0.528 Sum_probs=457.7
Q ss_pred HHHHHHHHHHHHHH---------HcCCcccccccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHh
Q 048639 7 ILSWHPKGNRVLMK---------IGGEVGAFDTDLSTGKVITGVSSHMSVIRDAIGEKLGHFLSSFATFFSGVLIAVICC 77 (1139)
Q Consensus 7 ~~~~~~~~~~~~~~---------l~~~~~~f~~~~~~G~l~~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 77 (1139)
.+...+++.|+..+ +++|+.||.++ ++|++++|+. |.++|++++...+...+.++.++++.+++|++++
T Consensus 215 ~~~~~~~~~rld~~l~~~~~~hll~Lpl~~f~~r-~~Ge~~sR~~-el~~Ir~flt~~~l~~iiD~~~~~i~l~vm~~ys 292 (709)
T COG2274 215 TYLIAHLGKRLDLELSGRFFRHLLRLPLSYFEKR-SVGEIISRVR-ELEQIREFLTGSILTLIIDLLFALIFLAVMFLYS 292 (709)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHcCcHHHccCC-ChhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555556655444 99999999987 8999999995 9999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Q 048639 78 WEVSLLIFLVVPMILVIGATYTKRMNAVSATKLLYLSEATSMIEQTISQIKTVFAFVGERSEIKSFSDCMDKQIIISRGE 157 (1139)
Q Consensus 78 ~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~ 157 (1139)
|.++++.++.+|+++++..++.+.+++..++..+..++.++.+.|++.|+++||+.+.|+.+..+|++...+..+...+.
T Consensus 293 ~~L~li~l~~~~l~~l~~~~~~~~l~~~~~~~~~~~a~~~s~lvE~i~gi~tvK~~~~e~~~~~~w~~~~~~~~~~~~~~ 372 (709)
T COG2274 293 WKLTLIVLAAIPLNVLITLIFQPLLRRKTRKLIEESAEQQSFLVETIKGIETVKALAAEPRFRSQWDNRLAKQVNIGFKT 372 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 048639 158 ALIKGVGLGMFQSVTFCCWALIIWVGAVVVTAKRSTGGEVLAAVMSILFGAIALTYAAPDMQVFNQAKAAGFEIFQVIQR 237 (1139)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~l~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ri~~~l~~ 237 (1139)
.........+..++..+..++++|+|+++|++|.+|.|.++++.+.......|+..+...+..++++..+.+|+.++++.
T Consensus 373 ~~~~~~~~~~~~~l~~l~~v~iL~~G~~lVl~~~lTlG~LiAf~~l~~~f~~pi~~L~~~~~~~q~~~~~~~rL~dil~~ 452 (709)
T COG2274 373 EKLALILNTIKSLLQQLSSVLILWFGAILVLEGELTLGQLVAFNMLAGYFISPITRLSQLWTDFQQAKVALERLGDILDT 452 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCccCCCCccccCCCccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEE
Q 048639 238 KPRISYSSKGKELEKIDGNIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDIL 317 (1139)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~ 317 (1139)
+++...+......++..+.|+++||+|+|+.. ++++|+|+||+|++||++||||+||||||||+|+|+|+|+|++|+|.
T Consensus 453 ~~E~~~~~~~~~~~~~~g~I~~~nvsf~y~~~-~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~~G~I~ 531 (709)
T COG2274 453 PPEQEGDKTLIHLPKLQGEIEFENVSFRYGPD-DPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQQGRIL 531 (709)
T ss_pred CcccccccccccccccCceEEEEEEEEEeCCC-CcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEE
Confidence 87643222123445567899999999999864 35799999999999999999999999999999999999999999999
Q ss_pred ECCccCCCCCHHHHhcceEEEecCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCC
Q 048639 318 IDSLNIKDLDLKSLRKNIGAVSQEPSLFTGSLMDNIKVGNMDADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLS 397 (1139)
Q Consensus 318 ~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LS 397 (1139)
+||.|+.+++++++|++||||+||+.||+|||+|||.+++|+.++|++++||+.+++++||.++|.||+|.+||+|.+||
T Consensus 532 ~dg~dl~~i~~~~lR~~ig~V~Q~~~Lf~gSI~eNi~l~~p~~~~e~i~~A~~~ag~~~fI~~lP~gy~t~v~E~G~~LS 611 (709)
T COG2274 532 LDGVDLNDIDLASLRRQVGYVLQDPFLFSGSIRENIALGNPEATDEEIIEAAQLAGAHEFIENLPMGYDTPVGEGGANLS 611 (709)
T ss_pred ECCEeHHhcCHHHHHhheeEEcccchhhcCcHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhccCEEEEEeCcEEEEecCh
Q 048639 398 GGQKQRIAIARAIVKNPPILLLDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVNADMIAVVEDGQVTETGTH 477 (1139)
Q Consensus 398 gGqkqRi~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~ 477 (1139)
||||||++|||||++||+||||||||||||+++|+.|.+.|.+...++|+|+||||++++++||||+||++|+|+++|+|
T Consensus 612 GGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~~~~T~I~IaHRl~ti~~adrIiVl~~Gkiv~~gs~ 691 (709)
T COG2274 612 GGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQILQGRTVIIIAHRLSTIRSADRIIVLDQGKIVEQGSH 691 (709)
T ss_pred HHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHhcCCeEEEEEccchHhhhccEEEEccCCceeccCCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhccchHHHHHHhhc
Q 048639 478 HSLLQTSDFYNRLFTMQ 494 (1139)
Q Consensus 478 ~~l~~~~~~~~~~~~~~ 494 (1139)
+|+++..|.|.+++..|
T Consensus 692 ~ell~~~g~y~~l~~~q 708 (709)
T COG2274 692 EELLAQGGLYARLYQQQ 708 (709)
T ss_pred HHHHHhcChHHHHHhcc
Confidence 99999999999998754
No 17
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=8.6e-84 Score=807.91 Aligned_cols=551 Identities=26% Similarity=0.354 Sum_probs=479.1
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 563 LLRLVVGTVAAAFSGISKPLFGFFIITIGVAYYDPQAKQEVGWYSLAFSLVGLFSLFTHTLQHYFFGVVGEKAMTNLRRT 642 (1139)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 642 (1139)
++.+...++++++..+.....++++..+++.............++++++++.++..++.+++.++....+.+...++|.+
T Consensus 135 ~~~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 214 (686)
T TIGR03797 135 RRDLLAILAMGLLGTLLGMLVPIATGILIGTAIPDADRSLLVQIALALLAAAVGAAAFQLAQSLAVLRLETRMDASLQAA 214 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333344444444334444444555443322222223334555666677788889999999999999999999999
Q ss_pred HHHHHHcCCCcccccCCCChhHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 048639 643 LYTGVLRNEIAWFEKPQNDAGSLTSRIVSDTSMVKAIISDRMSVIVQCISSILIATIVSLVVDWRMALVAWAVMPCHFIG 722 (1139)
Q Consensus 643 l~~~ll~~~~~ff~~~~~~~G~i~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~~~~~p~~~~~ 722 (1139)
+|++++++|++||+ ++++|++++|++ |++.+++.+...+...+..+..+++++++++.++|.+++++++++|+.+++
T Consensus 215 ~~~~ll~~~~~~~~--~~~~g~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~~~~~~ 291 (686)
T TIGR03797 215 VWDRLLRLPVSFFR--QYSTGDLASRAM-GISQIRRILSGSTLTTLLSGIFALLNLGLMFYYSWKLALVAVALALVAIAV 291 (686)
T ss_pred HHHHHHcCCHHHHC--CCChhHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999 688999999997 799999998887777777777777888888999999999999998888888
Q ss_pred HHHHHHhhhchhhhHHHHHHHHHHHHHHhhcchHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 723 GLIQAKSAQGFSGDSAAAHTEFISLTSESASNIRTVASFCHEENILQKAKISLEKTKRSSRKESIKYGVIQGFSLCLWNI 802 (1139)
Q Consensus 723 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 802 (1139)
..+..+..++..++..+...+..+.+.|+++|+++||+++.|+++.++|.+..++..+...+..........+...+..+
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 371 (686)
T TIGR03797 292 TLVLGLLQVRKERRLLELSGKISGLTVQLINGISKLRVAGAENRAFARWAKLFSRQRKLELSAQRIENLLTVFNAVLPVL 371 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888777777788888888899999999999999999999999999999999999888888888777777777777788
Q ss_pred HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCc
Q 048639 803 AHAVALWYTAVLIDKKQATFRDGIRAYQIFSLTVPSITELWTLIPTVISAITVLAPAFEILDRKTEIEPDAPESSESGRI 882 (1139)
Q Consensus 803 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~ 882 (1139)
..++++|+|++++..|.+++|.++++..+......++.++...+..+..+..+.+|+.++++.+++.+... ..+...
T Consensus 372 ~~~~il~~g~~lv~~g~ltiG~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~~---~~~~~~ 448 (686)
T TIGR03797 372 TSAALFAAAISLLGGAGLSLGSFLAFNTAFGSFSGAVTQLSNTLISILAVIPLWERAKPILEALPEVDEAK---TDPGKL 448 (686)
T ss_pred HHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCc---CCCCCC
Confidence 88889999999999999999999999999999999999999999999999999999999998655432211 112224
Q ss_pred cccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhh
Q 048639 883 KGRIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRS 962 (1139)
Q Consensus 883 ~g~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~ 962 (1139)
.|.|+|+||+|+|++. +.++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|++||+|+++++.+++|+
T Consensus 449 ~~~I~~~nvsf~Y~~~-~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~~~~lr~ 527 (686)
T TIGR03797 449 SGAIEVDRVTFRYRPD-GPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPESGSVFYDGQDLAGLDVQAVRR 527 (686)
T ss_pred CceEEEEEEEEEcCCC-CccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcCcCCHHHHHh
Confidence 5789999999999743 357999999999999999999999999999999999999999999999999999999999999
Q ss_pred hceEEccccccccccHHHHhccCCCcCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhcCC
Q 048639 963 QIGLVQQEPLLFSCSIRNNICYGNEAASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIARTLLKR 1042 (1139)
Q Consensus 963 ~i~~V~Qdp~LF~gTIreNL~~~~~~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalARALlr~ 1042 (1139)
+|+||||||++|+|||||||++++| ++|+++++|++.++++++++++|+||||++||+|.+|||||||||+|||||+++
T Consensus 528 ~i~~v~Q~~~lf~gTI~eNi~~~~~-~~~e~i~~al~~a~l~~~i~~lp~G~dt~ige~G~~LSGGQrQRialARAll~~ 606 (686)
T TIGR03797 528 QLGVVLQNGRLMSGSIFENIAGGAP-LTLDEAWEAARMAGLAEDIRAMPMGMHTVISEGGGTLSGGQRQRLLIARALVRK 606 (686)
T ss_pred ccEEEccCCccCcccHHHHHhcCCC-CCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999988 999999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhcCCEEEEEeCCEEEEecChhHHhhc
Q 048639 1043 PAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVINSDVIVVMDKGEVVEMGSHSTLVAE 1122 (1139)
Q Consensus 1043 p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~~DrI~vl~~G~ive~G~~~eLl~~ 1122 (1139)
|+|||||||||+||++||+.|++.|++. ++ |+|+||||++++..||||+|||+|+|+|.|+|+||+++
T Consensus 607 p~iLiLDEpTS~LD~~te~~i~~~L~~~-----------~~-T~IiItHr~~~i~~~D~Iivl~~G~iv~~G~~~~Ll~~ 674 (686)
T TIGR03797 607 PRILLFDEATSALDNRTQAIVSESLERL-----------KV-TRIVIAHRLSTIRNADRIYVLDAGRVVQQGTYDELMAR 674 (686)
T ss_pred CCEEEEeCCccCCCHHHHHHHHHHHHHh-----------CC-eEEEEecChHHHHcCCEEEEEECCEEEEECCHHHHHhC
Confidence 9999999999999999999999999863 23 59999999999999999999999999999999999986
Q ss_pred cCChHHHHHHHH
Q 048639 1123 SQGVYSRLYQLQ 1134 (1139)
Q Consensus 1123 ~~g~f~~l~~~~ 1134 (1139)
+|.|++|++.|
T Consensus 675 -~~~y~~l~~~q 685 (686)
T TIGR03797 675 -EGLFAQLARRQ 685 (686)
T ss_pred -CcHHHHHHHhc
Confidence 89999999865
No 18
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=6.3e-83 Score=725.67 Aligned_cols=548 Identities=25% Similarity=0.360 Sum_probs=480.6
Q ss_pred HHHHhhHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Q 048639 573 AAFSGISKPLFGFFIITIGVAYYDPQAKQEVGWYSLAFSLVGLFSLFTHTLQHYFFGVVGEKAMTNLRRTLYTGVLRNEI 652 (1139)
Q Consensus 573 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~~~ 652 (1139)
..+.++......+++.......+..........+...++++.++..++.+.+......++.++-..+|.++++++.+.+.
T Consensus 9 ~~l~~i~~i~qa~llA~~l~~l~~~~~~~~l~~~~~~l~~~~~lRa~l~~~~~~~~~~aa~~~~~~LR~~~l~~l~~~gp 88 (559)
T COG4988 9 AVLSGIAIIAQAALLADILTKLIEGQLFQSLLPLLILLLIALVLRAFLAWLRERLGYRAAAKVRASLRQLVLDKLAKLGP 88 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCh
Confidence 33444444445555555555555444344455667777778888889999999999999999999999999999999999
Q ss_pred cccccCCCChhHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 048639 653 AWFEKPQNDAGSLTSRIVSDTSMVKAIISDRMSVIVQCISSILIATIVSLVVDWRMALVAWAVMPCHFIGGLIQAKSAQG 732 (1139)
Q Consensus 653 ~ff~~~~~~~G~i~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~~~~~p~~~~~~~~~~~~~~~ 732 (1139)
.|-+ ..|+|++.+.++..++.++.++...++.++.+....+..++.++..+|..++++++++|++.++.++.....+.
T Consensus 89 ~~~~--~~~~g~~atl~~egve~l~~Y~~ryLPq~~~~~ivp~~i~i~v~~~~w~aalIllit~PlIPlfMilvg~~a~~ 166 (559)
T COG4988 89 AFIA--QKPAGSAATLALEGIEQLEPYYARYLPQMFLSAIVPLLILIAIFFFNWAAALILLITAPLIPLFMILVGLAAKD 166 (559)
T ss_pred hhhc--CCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 9988 78899999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred hhhhHHHHHHHHHHHHHHhhcchHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 733 FSGDSAAAHTEFISLTSESASNIRTVASFCHEENILQKAKISLEKTKRSSRKESIKYGVIQGFSLCLWNIAHAVALWYTA 812 (1139)
Q Consensus 733 ~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 812 (1139)
.+++.......+.+++.+.++|+.|+|+|+..+...++..+..++..+.+++.....-....+..++.++..+++..+.+
T Consensus 167 ~s~~~~~~~~~ls~~FLD~LrGL~TLr~f~~~~~~~~~i~~~se~fR~~TM~vLriAflSs~vLeffa~lsiAlvAv~~g 246 (559)
T COG4988 167 ASEKQFSALARLSGHFLDRLRGLETLRAFGRTEATEERIRKDSEDFRKATMSVLRIAFLSSAVLEFFAYLSIALVAVYIG 246 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888899999999999999999999999999999998888888887766555444444455566666666655555
Q ss_pred HHHhc-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCccccEEEEeE
Q 048639 813 VLIDK-KQATFRDGIRAYQIFSLTVPSITELWTLIPTVISAITVLAPAFEILDRKTEIEPDAPESSESGRIKGRIEFQNI 891 (1139)
Q Consensus 813 ~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~nv 891 (1139)
..... |.+++...+.++....-+..|+.++...+.....+..+.+.+..+++.+.+..+...........+..|+++|+
T Consensus 247 ~~ll~~G~ltl~~~l~~LiLAPEff~PlR~lGs~fH~~~~g~aa~d~i~~~l~~~~~~~~~~~~~~~~~~~~~ei~~~~l 326 (559)
T COG4988 247 FRLLGEGDLTLFAGLFVLILAPEFFQPLRDLGSFFHAAAAGEAAADKLFTLLESPVATPGSGEKAEVANEPPIEISLENL 326 (559)
T ss_pred HHHHccCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCCCccccccccCCCceeeecce
Confidence 55555 89999999999999999999999999999999999999999999998766543322211111222345667799
Q ss_pred EEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhceEEcccc
Q 048639 892 KFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQIGLVQQEP 971 (1139)
Q Consensus 892 sf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~~V~Qdp 971 (1139)
+|+||+.+ ++++|+||+++||+++||||+||||||||+++|+|+++|++|+|.+||+|.++++.+.||++++||||+|
T Consensus 327 ~~~y~~g~--~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~~G~I~vng~~l~~l~~~~~~k~i~~v~Q~p 404 (559)
T COG4988 327 SFRYPDGK--PALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPTQGEIRVNGIDLRDLSPEAWRKQISWVSQNP 404 (559)
T ss_pred EEecCCCC--cccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCccccccCHHHHHhHeeeeCCCC
Confidence 99998642 7999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccHHHHhccCCCcCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhcCCCCEEEeecc
Q 048639 972 LLFSCSIRNNICYGNEAASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIARTLLKRPAIMLLDEA 1051 (1139)
Q Consensus 972 ~LF~gTIreNL~~~~~~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalARALlr~p~ILlLDEa 1051 (1139)
+||+|||||||.+++++.+|++++++++++++.+|++. |+|+||++||+|.+|||||+||+++||||++++++++||||
T Consensus 405 ~lf~gTireNi~l~~~~~s~e~i~~al~~a~l~~~v~~-p~GLdt~ige~G~~LSgGQ~QRlaLARAll~~~~l~llDEp 483 (559)
T COG4988 405 YLFAGTIRENILLARPDASDEEIIAALDQAGLLEFVPK-PDGLDTVIGEGGAGLSGGQAQRLALARALLSPASLLLLDEP 483 (559)
T ss_pred ccccccHHHHhhccCCcCCHHHHHHHHHHhcHHHhhcC-CCcccchhccCCCCCCHHHHHHHHHHHHhcCCCCEEEecCC
Confidence 99999999999999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred ccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhcCCEEEEEeCCEEEEecChhHHhhccCChHHHHH
Q 048639 1052 TSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVINSDVIVVMDKGEVVEMGSHSTLVAESQGVYSRLY 1131 (1139)
Q Consensus 1052 TS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~~DrI~vl~~G~ive~G~~~eLl~~~~g~f~~l~ 1131 (1139)
||+||.+||+.|++.|.+.. ++ +|||+||||++.+.++|+|+|||+|+++|.|+|++|.++ +|.|++|+
T Consensus 484 TA~LD~etE~~i~~~l~~l~---------~~-ktvl~itHrl~~~~~~D~I~vld~G~l~~~g~~~~L~~~-~~~y~~l~ 552 (559)
T COG4988 484 TAHLDAETEQIILQALQELA---------KQ-KTVLVITHRLEDAADADRIVVLDNGRLVEQGTHEELSEK-QGLYANLL 552 (559)
T ss_pred ccCCCHhHHHHHHHHHHHHH---------hC-CeEEEEEcChHHHhcCCEEEEecCCceeccCCHHHHhhc-CcHHHHHH
Confidence 99999999999999999876 44 459999999999999999999999999999999999987 89999999
Q ss_pred HHHhh
Q 048639 1132 QLQAF 1136 (1139)
Q Consensus 1132 ~~~~~ 1136 (1139)
++|.+
T Consensus 553 ~~q~~ 557 (559)
T COG4988 553 KQQEG 557 (559)
T ss_pred HHHhc
Confidence 98865
No 19
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=5.2e-83 Score=804.66 Aligned_cols=510 Identities=27% Similarity=0.406 Sum_probs=462.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccCCCChhHHHHHHHhcHHHHHHHHHHHH
Q 048639 605 WYSLAFSLVGLFSLFTHTLQHYFFGVVGEKAMTNLRRTLYTGVLRNEIAWFEKPQNDAGSLTSRIVSDTSMVKAIISDRM 684 (1139)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~~~~ff~~~~~~~G~i~~r~~~D~~~i~~~~~~~l 684 (1139)
.+..+++++.++..++.+++.++....+.+...+++.++|+++++.|++||+ ++++|++++|++.| +.+++++...+
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~l~~~~~~--~~~~g~~~~r~~~~-~~i~~~~~~~~ 271 (710)
T TIGR03796 195 PLLLGMGLTALLQGVLTWLQLYYLRRLQIKLAVGMSARFLWHILRLPVRFFA--QRHAGDIASRVQLN-DQVAEFLSGQL 271 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHc--CCcccHHHHHhhhH-HHHHHHHHHHH
Confidence 3455566666778888999999999999999999999999999999999999 68899999999988 67898888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHHHHHHhhcchHHHHhhcch
Q 048639 685 SVIVQCISSILIATIVSLVVDWRMALVAWAVMPCHFIGGLIQAKSAQGFSGDSAAAHTEFISLTSESASNIRTVASFCHE 764 (1139)
Q Consensus 685 ~~~~~~~~~~~~~~~~~~~~~~~l~lv~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~ 764 (1139)
..++..++.+++.+++++.++|.+++++++.+|+.+++.++..+......++..+...+..+.+.|+++|+++||+++.+
T Consensus 272 ~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e 351 (710)
T TIGR03796 272 ATTALDAVMLVFYALLMLLYDPVLTLIGIAFAAINVLALQLVSRRRVDANRRLQQDAGKLTGVAISGLQSIETLKASGLE 351 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccCC
Confidence 88888888888888999999999999999999998888888887777777777788888999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 765 ENILQKAKISLEKTKRSSRKESIKYGVIQGFSLCLWNIAHAVALWYTAVLIDKKQATFRDGIRAYQIFSLTVPSITELWT 844 (1139)
Q Consensus 765 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 844 (1139)
+.+.++|.+...+..+...+..........+...+..+..++++|+|++++..|.+++|.++++..+......++..+..
T Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~il~~g~~~v~~g~lt~G~lva~~~l~~~~~~p~~~l~~ 431 (710)
T TIGR03796 352 SDFFSRWAGYQAKLLNAQQELGVLTQILGVLPTLLTSLNSALILVVGGLRVMEGQLTIGMLVAFQSLMSSFLEPVNNLVG 431 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998888888877777777777777778888888899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCCCCCC---C-CCCC-CCccccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEE
Q 048639 845 LIPTVISAITVLAPAFEILDRKTEIEPDAP---E-SSES-GRIKGRIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVAL 919 (1139)
Q Consensus 845 ~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~---~-~~~~-~~~~g~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaI 919 (1139)
.+..+..+..+.+|+.++++.+++.+.... . ...+ +...|.|+|+||+|+|++. +.++|+|+||+|+|||++||
T Consensus 432 ~~~~~~~~~~~~~ri~~il~~~~e~~~~~~~~~~~~~~~~~~~~~~I~~~~vsf~y~~~-~~~vL~~isl~i~~Ge~vaI 510 (710)
T TIGR03796 432 FGGTLQELEGDLNRLDDVLRNPVDPLLEEEEAPAAGSEPSPRLSGYVELRNITFGYSPL-EPPLIENFSLTLQPGQRVAL 510 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCccccccccccccccccCCCCCCeEEEEEEEEecCCC-CCCcccceeEEEcCCCEEEE
Confidence 999999999999999999987655432210 0 0111 2345789999999999753 35799999999999999999
Q ss_pred EcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhceEEccccccccccHHHHhccCCCcCCHHHHHHHHH
Q 048639 920 VGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQIGLVQQEPLLFSCSIRNNICYGNEAASEAEIVEVSK 999 (1139)
Q Consensus 920 vG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~~V~Qdp~LF~gTIreNL~~~~~~~sd~ei~~al~ 999 (1139)
||+||||||||+++|+|+|+|++|+|.+||+|+++++.+++|++|+||||||.+|+|||||||.+++|+++|+++++|++
T Consensus 511 vG~sGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTi~eNi~l~~~~~~~~~i~~al~ 590 (710)
T TIGR03796 511 VGGSGSGKSTIAKLVAGLYQPWSGEILFDGIPREEIPREVLANSVAMVDQDIFLFEGTVRDNLTLWDPTIPDADLVRACK 590 (710)
T ss_pred ECCCCCCHHHHHHHHhcCCCCCCcEEEECCEeHHHCCHHHHHhheeEEecCChhhhccHHHHhhCCCCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999988899999999999
Q ss_pred HcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccc
Q 048639 1000 KANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGE 1079 (1139)
Q Consensus 1000 ~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~ 1079 (1139)
.+++++++.++|+||||.+||+|.+|||||||||||||||+++|+|||||||||+||++||+.|.+.|++
T Consensus 591 ~~~l~~~i~~lp~gl~t~i~e~G~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~---------- 660 (710)
T TIGR03796 591 DAAIHDVITSRPGGYDAELAEGGANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR---------- 660 (710)
T ss_pred HhCCHHHHHhCcCcccceeccCCCCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh----------
Confidence 9999999999999999999999999999999999999999999999999999999999999999999984
Q ss_pred cCCCeEEEEEecCchhhhcCCEEEEEeCCEEEEecChhHHhhccCChHHHHH
Q 048639 1080 LASRTTQITVAHRLATVINSDVIVVMDKGEVVEMGSHSTLVAESQGVYSRLY 1131 (1139)
Q Consensus 1080 ~~~~tTvI~IaHrl~ti~~~DrI~vl~~G~ive~G~~~eLl~~~~g~f~~l~ 1131 (1139)
.+ +|+|+||||++++..||||+|||+|+|+|.|+|+||+++ +|.|++|+
T Consensus 661 -~~-~T~IiitHrl~~i~~~D~Iivl~~G~i~~~G~~~~Ll~~-~~~y~~l~ 709 (710)
T TIGR03796 661 -RG-CTCIIVAHRLSTIRDCDEIIVLERGKVVQRGTHEELWAV-GGAYARLI 709 (710)
T ss_pred -cC-CEEEEEecCHHHHHhCCEEEEEeCCEEEEecCHHHHHHc-CCcHHHHh
Confidence 23 459999999999999999999999999999999999986 89999987
No 20
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=7.9e-83 Score=801.96 Aligned_cols=556 Identities=26% Similarity=0.373 Sum_probs=480.8
Q ss_pred chhhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 559 NERELLRLVVGTVAAAFSGISKPLFGFFIITIGVAYYDPQAKQEVGWYSLAFSLVGLFSLFTHTLQHYFFGVVGEKAMTN 638 (1139)
Q Consensus 559 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 638 (1139)
.++.+..+...++++++..+.....++++..+++.............+..+++++.++..++.+++.++..+.+.+...+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iiD~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (708)
T TIGR01193 151 ITRQKKLIVNIVIAAIIVTLISIAGSYYLQKIIDTYIPHKMMGTLGIISIGLIIAYIIQQILSYIQIFLLNVLGQRLSID 230 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444444444444444444555556666655443222222333445555566677888899999999999999999
Q ss_pred HHHHHHHHHHcCCCcccccCCCChhHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Q 048639 639 LRRTLYTGVLRNEIAWFEKPQNDAGSLTSRIVSDTSMVKAIISDRMSVIVQCISSILIATIVSLVVDWRMALVAWAVMPC 718 (1139)
Q Consensus 639 l~~~l~~~ll~~~~~ff~~~~~~~G~i~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~~~~~p~ 718 (1139)
+|.++|+++++.|++||+ .+++|++++|++ |.+.+.+.+...+...+..+..+++.+++++.++|.+++++++++|+
T Consensus 231 l~~~~~~~ll~l~~~~f~--~~~~G~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~l 307 (708)
T TIGR01193 231 IILSYIKHLFELPMSFFS--TRRTGEIVSRFT-DASSIIDALASTILSLFLDMWILVIVGLFLVRQNMLLFLLSLLSIPV 307 (708)
T ss_pred HHHHHHHHHHcCCHHHhC--CCchhHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 999999999999999999 688999999998 89999988887777777777777777888889999999999999999
Q ss_pred HHHHHHHHHHhhhchhhhHHHHHHHHHHHHHHhhcchHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 719 HFIGGLIQAKSAQGFSGDSAAAHTEFISLTSESASNIRTVASFCHEENILQKAKISLEKTKRSSRKESIKYGVIQGFSLC 798 (1139)
Q Consensus 719 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 798 (1139)
++++.++..+..++..++..+...+..+.+.|+++|+++||+++.|+.+.+++.+...+..+...+..........+...
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (708)
T TIGR01193 308 YAVIIILFKRTFNKLNHDAMQANAVLNSSIIEDLNGIETIKSLTSEAERYSKIDSEFGDYLNKSFKYQKADQGQQAIKAV 387 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888888888888888888999999999999999999999999999999999988888877777776666677777
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCC
Q 048639 799 LWNIAHAVALWYTAVLIDKKQATFRDGIRAYQIFSLTVPSITELWTLIPTVISAITVLAPAFEILDRKTEIEPDAPESSE 878 (1139)
Q Consensus 799 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~~~ 878 (1139)
+..+..++++|+|++++..|.+|+|.++++..+......++..+...+..+..+..+.+|+.++++.+++.+.... ...
T Consensus 388 ~~~~~~i~il~~g~~lv~~g~ls~G~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~~~-~~~ 466 (708)
T TIGR01193 388 TKLILNVVILWTGAYLVMRGKLTLGQLITFNALLSYFLTPLENIINLQPKLQAARVANNRLNEVYLVDSEFINKKK-RTE 466 (708)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccccc-ccC
Confidence 7777888899999999999999999999999999999999999999999999999999999999987655432211 111
Q ss_pred CCCccccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChH
Q 048639 879 SGRIKGRIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLR 958 (1139)
Q Consensus 879 ~~~~~g~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~ 958 (1139)
.+...|.|+|+||+|+|++ +.++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|++||+|+++++.+
T Consensus 467 ~~~~~~~I~~~~vsf~y~~--~~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~~~ 544 (708)
T TIGR01193 467 LNNLNGDIVINDVSYSYGY--GSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQARSGEILLNGFSLKDIDRH 544 (708)
T ss_pred CCCCCCcEEEEEEEEEcCC--CCcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCCcEEEECCEEHHHcCHH
Confidence 2234578999999999973 35799999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhceEEccccccccccHHHHhccC-CCcCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHH
Q 048639 959 RLRSQIGLVQQEPLLFSCSIRNNICYG-NEAASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIAR 1037 (1139)
Q Consensus 959 ~lR~~i~~V~Qdp~LF~gTIreNL~~~-~~~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalAR 1037 (1139)
++|++|+||||||+||+|||||||.++ +++++|++++++++.+++++++.++|+||||.+||+|.+|||||||||+|||
T Consensus 545 ~lr~~i~~v~Q~~~lf~gTI~eNi~l~~~~~~~~~~i~~a~~~a~l~~~i~~lp~gldt~i~e~G~~LSgGQrQRialAR 624 (708)
T TIGR01193 545 TLRQFINYLPQEPYIFSGSILENLLLGAKENVSQDEIWAACEIAEIKDDIENMPLGYQTELSEEGSSISGGQKQRIALAR 624 (708)
T ss_pred HHHHheEEEecCceehhHHHHHHHhccCCCCCCHHHHHHHHHHhCCHHHHHhcccccCcEecCCCCCCCHHHHHHHHHHH
Confidence 999999999999999999999999998 5789999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhcCCEEEEEeCCEEEEecChh
Q 048639 1038 TLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVINSDVIVVMDKGEVVEMGSHS 1117 (1139)
Q Consensus 1038 ALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~~DrI~vl~~G~ive~G~~~ 1117 (1139)
|++++|+|||||||||+||++||+.|++.|++. +++ |+|+||||++++..||+|+||++|+++|.|+|+
T Consensus 625 all~~p~iliLDE~Ts~LD~~te~~i~~~L~~~----------~~~-T~IiitHr~~~~~~~D~i~~l~~G~i~~~G~~~ 693 (708)
T TIGR01193 625 ALLTDSKVLILDESTSNLDTITEKKIVNNLLNL----------QDK-TIIFVAHRLSVAKQSDKIIVLDHGKIIEQGSHD 693 (708)
T ss_pred HHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh----------cCC-EEEEEecchHHHHcCCEEEEEECCEEEEECCHH
Confidence 999999999999999999999999999999863 334 599999999999999999999999999999999
Q ss_pred HHhhccCChHHHHHH
Q 048639 1118 TLVAESQGVYSRLYQ 1132 (1139)
Q Consensus 1118 eLl~~~~g~f~~l~~ 1132 (1139)
||+++ +|.|++|++
T Consensus 694 ~L~~~-~~~y~~l~~ 707 (708)
T TIGR01193 694 ELLDR-NGFYASLIH 707 (708)
T ss_pred HHHhc-CCcHHHHhh
Confidence 99986 899999985
No 21
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=3.1e-81 Score=766.67 Aligned_cols=557 Identities=25% Similarity=0.330 Sum_probs=466.1
Q ss_pred chhhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-Cchh---hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 559 NERELLRLVVGTVAAAFSGISKPLFGFFIITIGVAYY-DPQA---KQEVGWYSLAFSLVGLFSLFTHTLQHYFFGVVGEK 634 (1139)
Q Consensus 559 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 634 (1139)
.++.++.+++++++.++..++....++++...++... .... .....+....+.+++++..++.++..++....+.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (574)
T PRK11160 11 YKRHWFMLSLGILLAIVTLLASIGLLTLSGWFLSASAVAGLAGLYSFNYMLPAAGVRGAAIGRTAGRYGERLVSHDATFR 90 (574)
T ss_pred HhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444444545555555444444444444444444322 1110 00111122334445566777888888899999999
Q ss_pred HHHHHHHHHHHHHHcCCCcccccCCCChhHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q 048639 635 AMTNLRRTLYTGVLRNEIAWFEKPQNDAGSLTSRIVSDTSMVKAIISDRMSVIVQCISSILIATIVSLVVDWRMALVAWA 714 (1139)
Q Consensus 635 ~~~~l~~~l~~~ll~~~~~ff~~~~~~~G~i~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~~~ 714 (1139)
...++|.++|++++++|++||+ +.++|++++|+++|++.++..+...+..++..++.+++++++++.++|.+++++++
T Consensus 91 ~~~~lR~~l~~~l~~~~~~~~~--~~~~g~~~srl~~Dv~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~~~ 168 (574)
T PRK11160 91 VLTHLRVFTFSKLLPLSPAGLA--RYRQGDLLNRLVADVDTLDHLYLRLISPLVAALVVILVLTIGLSFFDLTLALTLGG 168 (574)
T ss_pred HHHHHHHHHHHHhhccChHhhc--cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999 68899999999999999999999999999999999999999999999999998888
Q ss_pred HHHHHHH-HHHHHHHhhhchhhhHHHHHHHHHHHHHHhhcchHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 715 VMPCHFI-GGLIQAKSAQGFSGDSAAAHTEFISLTSESASNIRTVASFCHEENILQKAKISLEKTKRSSRKESIKYGVIQ 793 (1139)
Q Consensus 715 ~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 793 (1139)
.+|++++ ..++..+..+...++.++...+..+.+.|.++|+++||+|+.++.+.+++.+..++..+...+.....+...
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (574)
T PRK11160 169 ILLLLLLLLPLLFYRLGKKPGQDLTHLRAQYRVQLTEWLQGQAELTLFGAEDRYRQQLEQTEQQWLAAQRRQANLTGLSQ 248 (574)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8876654 345556666666777778888899999999999999999999999999999999999888888877777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCC
Q 048639 794 GFSLCLWNIAHAVALWYTAVLIDKKQATFRDGIRAYQIFSL-TVPSITELWTLIPTVISAITVLAPAFEILDRKTEIEPD 872 (1139)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~ 872 (1139)
.+...+..+..++++++|+++ ..|.++.|.+++++.+... ...++..+...+.....+..+.+|+.++++.+++.+..
T Consensus 249 ~~~~~~~~~~~~~i~~~g~~~-~~g~~t~g~l~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~ri~~ll~~~~~~~~~ 327 (574)
T PRK11160 249 ALMILANGLTVVLMLWLAAGG-VGGNAQPGALIALFVFAALAAFEALMPVAGAFQHLGQVIASARRINEITEQKPEVTFP 327 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-hccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 777777777777888999888 4788899887776655433 34466667777888889999999999999876553211
Q ss_pred CCCCCCCCCccccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccc
Q 048639 873 APESSESGRIKGRIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGI 952 (1139)
Q Consensus 873 ~~~~~~~~~~~g~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di 952 (1139)
.. ..+....+.|+|+||+|+|++. +.++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|.+||+|+
T Consensus 328 ~~--~~~~~~~~~i~~~~v~f~y~~~-~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p~~G~I~i~g~~i 404 (574)
T PRK11160 328 TT--STAAADQVSLTLNNVSFTYPDQ-PQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDPQQGEILLNGQPI 404 (574)
T ss_pred cc--cCCCCCCCeEEEEEEEEECCCC-CCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEh
Confidence 11 1111235689999999999753 34799999999999999999999999999999999999999999999999999
Q ss_pred CCCChHHHhhhceEEccccccccccHHHHhccCCCcCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHH
Q 048639 953 KEYNLRRLRSQIGLVQQEPLLFSCSIRNNICYGNEAASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQR 1032 (1139)
Q Consensus 953 ~~~~l~~lR~~i~~V~Qdp~LF~gTIreNL~~~~~~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQr 1032 (1139)
++++.+++|++++||||||++|++||+|||.++.|+.+|++++++++.+++++++++ |+||||.+||+|.+||||||||
T Consensus 405 ~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~al~~~~l~~~i~~-p~GldT~vge~g~~LSgGqrqR 483 (574)
T PRK11160 405 ADYSEAALRQAISVVSQRVHLFSATLRDNLLLAAPNASDEALIEVLQQVGLEKLLED-DKGLNAWLGEGGRQLSGGEQRR 483 (574)
T ss_pred hhCCHHHHHhheeEEcccchhhcccHHHHhhcCCCccCHHHHHHHHHHcCCHHHHcC-ccccCchhcCCCCCCCHHHHHH
Confidence 999999999999999999999999999999999888999999999999999999999 9999999999999999999999
Q ss_pred HHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhcCCEEEEEeCCEEEE
Q 048639 1033 IAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVINSDVIVVMDKGEVVE 1112 (1139)
Q Consensus 1033 lalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~~DrI~vl~~G~ive 1112 (1139)
||||||++++|+|||||||||+||++||+.|++.|++.. ++ +|+|+||||++++..||+|++|++|+++|
T Consensus 484 ialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~---------~~-~tviiitHr~~~~~~~d~i~~l~~G~i~~ 553 (574)
T PRK11160 484 LGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHA---------QN-KTVLMITHRLTGLEQFDRICVMDNGQIIE 553 (574)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHc---------CC-CEEEEEecChhHHHhCCEEEEEeCCeEEE
Confidence 999999999999999999999999999999999999764 34 45999999999999999999999999999
Q ss_pred ecChhHHhhccCChHHHHHHH
Q 048639 1113 MGSHSTLVAESQGVYSRLYQL 1133 (1139)
Q Consensus 1113 ~G~~~eLl~~~~g~f~~l~~~ 1133 (1139)
.|+|+||+++ +|.|++||+.
T Consensus 554 ~g~~~~l~~~-~g~y~~l~~~ 573 (574)
T PRK11160 554 QGTHQELLAQ-QGRYYQLKQR 573 (574)
T ss_pred eCCHHHHHhc-CcHHHHHHhh
Confidence 9999999987 8999999863
No 22
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=4.5e-81 Score=771.60 Aligned_cols=513 Identities=32% Similarity=0.478 Sum_probs=463.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccCCCChhHHHHHHHhcHHHHHHHHHHHHHH
Q 048639 607 SLAFSLVGLFSLFTHTLQHYFFGVVGEKAMTNLRRTLYTGVLRNEIAWFEKPQNDAGSLTSRIVSDTSMVKAIISDRMSV 686 (1139)
Q Consensus 607 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~~~~ff~~~~~~~G~i~~r~~~D~~~i~~~~~~~l~~ 686 (1139)
..+++++.++..++.+++.++..+.+.+....+|.++++++++.|.++|+ ....|++++|+++|++.+.+.+...+..
T Consensus 68 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~--~~~~g~~~~~~~~d~~~i~~~~~~~~~~ 145 (582)
T PRK11176 68 PLVVIGLMILRGITSFISSYCISWVSGKVVMTMRRRLFGHMMGMPVSFFD--KQSTGTLLSRITYDSEQVASSSSGALIT 145 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhC--CCCccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444566777788888888888999999999999999999999999999 6789999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHHHHHHhhcchHHHHhhcchHH
Q 048639 687 IVQCISSILIATIVSLVVDWRMALVAWAVMPCHFIGGLIQAKSAQGFSGDSAAAHTEFISLTSESASNIRTVASFCHEEN 766 (1139)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~~~~l~lv~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~ 766 (1139)
++..++.+++.+++++.++|.+++++++++|+.+++..+..+..++..++.++...+..+.+.|.++|+++||+++.++.
T Consensus 146 ~~~~~~~~~~~~~~l~~~~~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~ 225 (582)
T PRK11176 146 VVREGASIIGLFIMMFYYSWQLSLILIVIAPIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEV 225 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhCcCHH
Confidence 99999999999999999999999999998888888887777777777777888888899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 767 ILQKAKISLEKTKRSSRKESIKYGVIQGFSLCLWNIAHAVALWYTAVLIDKKQATFRDGIRAYQIFSLTVPSITELWTLI 846 (1139)
Q Consensus 767 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 846 (1139)
+.++|.+..+...+...+..........+...+..+..+++++++++++..|.+++|.+++++.++.....++..+...+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~~g~is~g~~~~~~~~~~~~~~pl~~l~~~~ 305 (582)
T PRK11176 226 ETKRFDKVSNRMRQQGMKMVSASSISDPIIQLIASLALAFVLYAASFPSVMDTLTAGTITVVFSSMIALMRPLKSLTNVN 305 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998888877777777777777777788888899999999999999999988888888889999999999
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCccccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCC
Q 048639 847 PTVISAITVLAPAFEILDRKTEIEPDAPESSESGRIKGRIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAG 926 (1139)
Q Consensus 847 ~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSG 926 (1139)
..+..+..+.+|+.++++.+++.+... ...++..+.|+|+||+|+|+++ +.++|+|+||+|+|||++||||+||||
T Consensus 306 ~~~~~~~~~~~ri~~~~~~~~~~~~~~---~~~~~~~~~i~~~~vsf~y~~~-~~~il~~i~l~i~~G~~~aIvG~sGsG 381 (582)
T PRK11176 306 AQFQRGMAACQTLFAILDLEQEKDEGK---RVIERAKGDIEFRNVTFTYPGK-EVPALRNINFKIPAGKTVALVGRSGSG 381 (582)
T ss_pred HHHHHHHHHHHHHHHHhcCCCcCCCCC---cCCCCCCCeEEEEEEEEecCCC-CCccccCceEEeCCCCEEEEECCCCCC
Confidence 999999999999999987654322111 1112234679999999999753 357999999999999999999999999
Q ss_pred HHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhceEEccccccccccHHHHhccCCCc-CCHHHHHHHHHHcCchH
Q 048639 927 KSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQIGLVQQEPLLFSCSIRNNICYGNEA-ASEAEIVEVSKKANIHD 1005 (1139)
Q Consensus 927 KSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~~V~Qdp~LF~gTIreNL~~~~~~-~sd~ei~~al~~~~l~~ 1005 (1139)
||||+++|+|+|+|++|+|++||+|+++++.+++|++++||||||++|+|||||||.+++++ ++|++++++++.+++++
T Consensus 382 KSTLl~ll~gl~~p~~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~al~~~~l~~ 461 (582)
T PRK11176 382 KSTIANLLTRFYDIDEGEILLDGHDLRDYTLASLRNQVALVSQNVHLFNDTIANNIAYARTEQYSREQIEEAARMAYAMD 461 (582)
T ss_pred HHHHHHHHHhccCCCCceEEECCEEhhhcCHHHHHhhceEEccCceeecchHHHHHhcCCCCCCCHHHHHHHHHHhCcHH
Confidence 99999999999999999999999999999999999999999999999999999999998654 79999999999999999
Q ss_pred HHhhCCCCccccccCCCCCCChHHHHHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeE
Q 048639 1006 FISSLPDGYDTVVGEKGCQLSGGQKQRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTT 1085 (1139)
Q Consensus 1006 ~i~~lp~gldt~v~e~G~~LSgGQrQrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tT 1085 (1139)
+++++|+||||.+||+|.+|||||||||+|||||+++|+|||||||||+||++|++.+.+.|++.. .++ |
T Consensus 462 ~i~~lp~Gldt~ig~~g~~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~---------~~~-t 531 (582)
T PRK11176 462 FINKMDNGLDTVIGENGVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQ---------KNR-T 531 (582)
T ss_pred HHHhcccccCceeCCCCCcCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHh---------CCC-E
Confidence 999999999999999999999999999999999999999999999999999999999999999764 344 5
Q ss_pred EEEEecCchhhhcCCEEEEEeCCEEEEecChhHHhhccCChHHHHHHHHhh
Q 048639 1086 QITVAHRLATVINSDVIVVMDKGEVVEMGSHSTLVAESQGVYSRLYQLQAF 1136 (1139)
Q Consensus 1086 vI~IaHrl~ti~~~DrI~vl~~G~ive~G~~~eLl~~~~g~f~~l~~~~~~ 1136 (1139)
+|+||||++++..||+|++|++|+|+|.|+|++|+++ ++.|++|++.|..
T Consensus 532 vI~VtHr~~~~~~~D~Ii~l~~g~i~e~g~~~~l~~~-~~~y~~l~~~~~~ 581 (582)
T PRK11176 532 SLVIAHRLSTIEKADEILVVEDGEIVERGTHAELLAQ-NGVYAQLHKMQFG 581 (582)
T ss_pred EEEEecchHHHHhCCEEEEEECCEEEEeCCHHHHHhC-CChHHHHHHHHhc
Confidence 9999999999999999999999999999999999987 7999999987753
No 23
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3e-84 Score=701.98 Aligned_cols=506 Identities=30% Similarity=0.460 Sum_probs=440.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccCCCChhHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 617 SLFTHTLQHYFFGVVGEKAMTNLRRTLYTGVLRNEIAWFEKPQNDAGSLTSRIVSDTSMVKAIISDRMSVIVQCISSILI 696 (1139)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~~~~ff~~~~~~~G~i~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~ 696 (1139)
+.++.-++.+++....+...+.+..++|+|+.++++.|+- .+.+|+.+.-..+..+.+. ++.....++.+.+.-+.+
T Consensus 272 sG~~~nlRtfLWi~VqQyttR~ie~~lfrHlh~LSlrwHL--~rrtGeVLrvmdrGtssvt-ll~yvVF~i~PtllDl~v 348 (790)
T KOG0056|consen 272 SGFLNNLRTFLWIPVQQYTTREIETELFRHLHNLSLRWHL--NRRTGEVLRVMDRGTSSVT-LLEYVVFQIGPTLLDLGV 348 (790)
T ss_pred ccchhhhheeEEEEhhHhHHHHHHHHHHHHHHhhceeeee--cccccceeehhccCcchhh-HHHHHHhhcccHHHHhhh
Confidence 3567778888888888999999999999999999999998 6779999988888888777 666666666666666666
Q ss_pred HHHHH-HHHhHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHHHHHHhhcchHHHHhhcchHHHHHHHHHHH
Q 048639 697 ATIVS-LVVDWRMALVAWAVMPCHFIGGLIQAKSAQGFSGDSAAAHTEFISLTSESASNIRTVASFCHEENILQKAKISL 775 (1139)
Q Consensus 697 ~~~~~-~~~~~~l~lv~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~ 775 (1139)
+++.. ..++|+++++++.++.++........-...+..|++.....+....-.+++-+.+|+|-|++|+...++|.+.+
T Consensus 349 a~vYF~~~Fn~wFgLIVfl~m~lY~~~Ti~iTeWRTk~rR~Mn~~~nesrAr~vDsllNFETVKyy~Ae~yEverYreAi 428 (790)
T KOG0056|consen 349 AMVYFFIKFNIWFGLIVFLMMLLYCYVTIKITEWRTKARRKMNNSWNESRARQVDSLLNFETVKYYNAEDYEVERYREAI 428 (790)
T ss_pred hhhhhhhhHhHHHHHHHHHHHHHHhheeeeeehhhHHHHHHhhhhhhhhhhhhhhhhhcchhhhccCchhhhHHHHHHHH
Confidence 65544 35689999888887777665544333333344555555666777888999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 776 EKTKRSSRKESIKYGVIQGFSLCLWNIAHAVALWYTAVLIDKKQATFRDGIRAYQIFSLTVPSITELWTLIPTVISAITV 855 (1139)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 855 (1139)
.++++..++.....+...-....+..+.....-.+.++.+..+..++|+.+....++....+|+.........++++...
T Consensus 429 l~Yqk~E~ks~~sLnfLN~~Qn~Ii~lgll~gsll~aY~Vt~q~ltVGDfVlf~TYliqLy~PLN~FGT~YR~iQ~nfiD 508 (790)
T KOG0056|consen 429 LKYQKQEWKSLASLNFLNIVQNGIIGLGLLAGSLLCAYRVTEQTLTVGDFVLFLTYLIQLYMPLNFFGTYYRSIQKNFID 508 (790)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhHHhhhhheeeeeeeeccccccceehHHHHHHHHhCchHHHHHHHHHHHHhhhh
Confidence 99999888876666555555555555655556666677778889999999999999999999999999999999999999
Q ss_pred HHHHHHHhccCCCCCCCCCCCCCCCCccccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHh
Q 048639 856 LAPAFEILDRKTEIEPDAPESSESGRIKGRIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLL 935 (1139)
Q Consensus 856 ~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~ 935 (1139)
+|++++++++++|.... |..++....+|.|+|+||+|.|. |++|||+||||++.||+.+|+|||||+||||++++|+
T Consensus 509 mEnmfdllkee~eVvd~-P~a~pl~~~~G~i~fsnvtF~Y~--p~k~vl~disF~v~pGktvAlVG~SGaGKSTimRlLf 585 (790)
T KOG0056|consen 509 MENMFDLLKEEPEVVDL-PGAPPLKVTQGKIEFSNVTFAYD--PGKPVLSDISFTVQPGKTVALVGPSGAGKSTIMRLLF 585 (790)
T ss_pred HHHHHHHhhcCchhhcC-CCCCCccccCCeEEEEEeEEecC--CCCceeecceEEecCCcEEEEECCCCCchhHHHHHHH
Confidence 99999999988776432 22223334679999999999995 5689999999999999999999999999999999999
Q ss_pred ccccCCccEEEECCcccCCCChHHHhhhceEEccccccccccHHHHhccCCCcCCHHHHHHHHHHcCchHHHhhCCCCcc
Q 048639 936 RFYDPNEGIILIDGKGIKEYNLRRLRSQIGLVQQEPLLFSCSIRNNICYGNEAASEAEIVEVSKKANIHDFISSLPDGYD 1015 (1139)
Q Consensus 936 rl~~p~~G~I~idG~di~~~~l~~lR~~i~~V~Qdp~LF~gTIreNL~~~~~~~sd~ei~~al~~~~l~~~i~~lp~gld 1015 (1139)
||||.++|+|.|||+||+.+..+.||++||+||||.+||+.||.+||.|+.|.+++||+.+|++.+++||-|.++|+||+
T Consensus 586 Rffdv~sGsI~iDgqdIrnvt~~SLRs~IGVVPQDtvLFNdTI~yNIryak~~AsneevyaAAkAA~IHdrIl~fPegY~ 665 (790)
T KOG0056|consen 586 RFFDVNSGSITIDGQDIRNVTQSSLRSSIGVVPQDTVLFNDTILYNIRYAKPSASNEEVYAAAKAAQIHDRILQFPEGYN 665 (790)
T ss_pred HHhhccCceEEEcCchHHHHHHHHHHHhcCcccCcceeecceeeeheeecCCCCChHHHHHHHHHhhHHHHHhcCchhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCChHHHHHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchh
Q 048639 1016 TVVGEKGCQLSGGQKQRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLAT 1095 (1139)
Q Consensus 1016 t~v~e~G~~LSgGQrQrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~t 1095 (1139)
|.|||+|-.||||||||+||||++|++|.|++||||||+||..||+.||.++.+.. +++| .|+|||||+|
T Consensus 666 t~VGERGLkLSGGEKQRVAiARtiLK~P~iIlLDEATSALDT~tER~IQaaL~rlc---------a~RT-tIVvAHRLST 735 (790)
T KOG0056|consen 666 TRVGERGLKLSGGEKQRVAIARTILKAPSIILLDEATSALDTNTERAIQAALARLC---------ANRT-TIVVAHRLST 735 (790)
T ss_pred hhhhhcccccCCcchhhHHHHHHHhcCCcEEEEcchhhhcCCccHHHHHHHHHHHh---------cCCc-eEEEeeeehh
Confidence 99999999999999999999999999999999999999999999999999999876 5666 7999999999
Q ss_pred hhcCCEEEEEeCCEEEEecChhHHhhccCChHHHHHHHHhhcC
Q 048639 1096 VINSDVIVVMDKGEVVEMGSHSTLVAESQGVYSRLYQLQAFSG 1138 (1139)
Q Consensus 1096 i~~~DrI~vl~~G~ive~G~~~eLl~~~~g~f~~l~~~~~~~~ 1138 (1139)
|.+||.|+|+++|+|+|.|+|+||+.+.+|.|++||+.|+..+
T Consensus 736 ivnAD~ILvi~~G~IvErG~HeeLl~rdgG~Ya~MWq~qqa~g 778 (790)
T KOG0056|consen 736 IVNADLILVISNGRIVERGRHEELLKRDGGAYADMWQAQQAMG 778 (790)
T ss_pred eecccEEEEEeCCeEeecCcHHHHHhccCCcHHHHHHHHHhcC
Confidence 9999999999999999999999999988999999998776553
No 24
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=4.1e-81 Score=784.71 Aligned_cols=545 Identities=27% Similarity=0.413 Sum_probs=470.0
Q ss_pred hHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 562 ELLRLVVGTVAAAFSGISKPLFGFFIITIGVAYYDPQAKQEVGWYSLAFSLVGLFSLFTHTLQHYFFGVVGEKAMTNLRR 641 (1139)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 641 (1139)
.+..+...++++++..+.....++++..+++.............+..+++++.++..++.+++.++..+.+.+...++|.
T Consensus 145 ~~~~~~~~~~~~~~~~l~~l~~p~~~~~iiD~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 224 (694)
T TIGR03375 145 SWPLYRDVLIASLLINLLALASPLFVMNVYDRVVPNQAFETLWVLAIGVALAIVFDFVLKTLRSYFLDVAGKKADLILSA 224 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333333333333333444444444443332222222333444455556677888899999999999999999999
Q ss_pred HHHHHHHcCCCcccccCCCChhHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 048639 642 TLYTGVLRNEIAWFEKPQNDAGSLTSRIVSDTSMVKAIISDRMSVIVQCISSILIATIVSLVVDWRMALVAWAVMPCHFI 721 (1139)
Q Consensus 642 ~l~~~ll~~~~~ff~~~~~~~G~i~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~~~~~p~~~~ 721 (1139)
++|+|++++|++| + .+++|++++|+ +|++.+++.+...+...+..+..+++.+++++.++|.+++++++.+|++++
T Consensus 225 ~~~~~ll~l~~~~-~--~~~~G~~~~r~-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~l~~~ 300 (694)
T TIGR03375 225 KLFERVLGLRMEA-R--PASVGSFANQL-REFESVRDFFTSATLTALIDLPFALLFLLVIAIIGGPLVWVPLVAIPLILL 300 (694)
T ss_pred HHHHHHhCCCccc-C--CCChhHHHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 9999999999998 5 46899999999 799999999988877777777777777788889999999999999999988
Q ss_pred HHHHHHHhhhchhhhHHHHHHHHHHHHHHhhcchHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 722 GGLIQAKSAQGFSGDSAAAHTEFISLTSESASNIRTVASFCHEENILQKAKISLEKTKRSSRKESIKYGVIQGFSLCLWN 801 (1139)
Q Consensus 722 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 (1139)
+.++..+..++..++..+...+..+.+.|+++|+++||+|+.|+.+.+++.+..++..+...+..........+...+..
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (694)
T TIGR03375 301 PGLLLQRPLSRLAEESMRESAQRNAVLVESLSGLETIKALNAEGRFQRRWEQTVAALARSGLKSRFLSNLATNFAQFIQQ 380 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888888888888888899999999999999999999999999999999999888888887777777777777777
Q ss_pred HHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCC
Q 048639 802 IAHAVALWYTAVLIDKKQATFRDGIRAYQIFSLTVPSITELWTLIPTVISAITVLAPAFEILDRKTEIEPDAPESSESGR 881 (1139)
Q Consensus 802 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~ 881 (1139)
+..++++|+|++++..|.+++|.++++..+......++..+...+..+..+..+.+|+.++++.+++.+... .....+.
T Consensus 381 ~~~~~il~~g~~~v~~g~ls~G~l~a~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~~~-~~~~~~~ 459 (694)
T TIGR03375 381 LVSVAIVVVGVYLISDGELTMGGLIACVMLSGRALAPLGQLAGLLTRYQQAKTALQSLDELMQLPVERPEGT-RFLHRPR 459 (694)
T ss_pred HHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCC-CCCCCCC
Confidence 888889999999999999999999999999999999999999999999999999999999998766532211 1111122
Q ss_pred ccccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHh
Q 048639 882 IKGRIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLR 961 (1139)
Q Consensus 882 ~~g~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR 961 (1139)
..|.|+|+||+|+|++. +.++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|.+||+|+++++++++|
T Consensus 460 ~~~~I~~~~vsf~Y~~~-~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~l~~~~~~~lr 538 (694)
T TIGR03375 460 LQGEIEFRNVSFAYPGQ-ETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPTEGSVLLDGVDIRQIDPADLR 538 (694)
T ss_pred ccceEEEEEEEEEeCCC-CccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEhhhCCHHHHH
Confidence 45789999999999743 35799999999999999999999999999999999999999999999999999999999999
Q ss_pred hhceEEccccccccccHHHHhccCCCcCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhcC
Q 048639 962 SQIGLVQQEPLLFSCSIRNNICYGNEAASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIARTLLK 1041 (1139)
Q Consensus 962 ~~i~~V~Qdp~LF~gTIreNL~~~~~~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalARALlr 1041 (1139)
++++||||||++|+|||+|||.+++|++++++++++++.+++++++.++|+||||.+||+|.+|||||||||+||||+++
T Consensus 539 ~~i~~v~Q~~~lf~~TI~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~G~~LSgGQrQRlalARall~ 618 (694)
T TIGR03375 539 RNIGYVPQDPRLFYGTLRDNIALGAPYADDEEILRAAELAGVTEFVRRHPDGLDMQIGERGRSLSGGQRQAVALARALLR 618 (694)
T ss_pred hccEEECCChhhhhhhHHHHHhCCCCCCCHHHHHHHHHHcChHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhc
Confidence 99999999999999999999999988899999999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhcCCEEEEEeCCEEEEecChhHHhh
Q 048639 1042 RPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVINSDVIVVMDKGEVVEMGSHSTLVA 1121 (1139)
Q Consensus 1042 ~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~~DrI~vl~~G~ive~G~~~eLl~ 1121 (1139)
+|+|||||||||+||++||+.|++.|++.. +++ |+|+||||++++..||||+||++|+|+|.|+|+||++
T Consensus 619 ~p~iliLDE~Ts~LD~~te~~i~~~l~~~~---------~~~-T~iiItHrl~~~~~~D~iivl~~G~i~e~G~~~eLl~ 688 (694)
T TIGR03375 619 DPPILLLDEPTSAMDNRSEERFKDRLKRWL---------AGK-TLVLVTHRTSLLDLVDRIIVMDNGRIVADGPKDQVLE 688 (694)
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHh---------CCC-EEEEEecCHHHHHhCCEEEEEeCCEEEeeCCHHHHHH
Confidence 999999999999999999999999999764 344 5999999999999999999999999999999999986
Q ss_pred c
Q 048639 1122 E 1122 (1139)
Q Consensus 1122 ~ 1122 (1139)
+
T Consensus 689 ~ 689 (694)
T TIGR03375 689 A 689 (694)
T ss_pred H
Confidence 5
No 25
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=2.2e-80 Score=777.30 Aligned_cols=546 Identities=29% Similarity=0.416 Sum_probs=476.7
Q ss_pred HHHHhhHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Q 048639 573 AAFSGISKPLFGFFIITIGVAYYDPQAKQEVGWYSLAFSLVGLFSLFTHTLQHYFFGVVGEKAMTNLRRTLYTGVLRNEI 652 (1139)
Q Consensus 573 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~~~ 652 (1139)
+++..+.....++++..+++.............+..+++++.++..++.+++.++....+.+...++|.++|++++++|+
T Consensus 148 s~~~~ll~l~~p~~~~~iid~v~~~~~~~~l~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~l~~l~~ 227 (694)
T TIGR01846 148 SLALQLFALVTPLLFQVVIDKVLVHRGLSTLSVLALAMLAVAIFEPALGGLRTYLFAHLTSRIDVELGARLYRHLLGLPL 227 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCH
Confidence 33333333334444555555443222222334455566666777888899999999999999999999999999999999
Q ss_pred cccccCCCChhHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 048639 653 AWFEKPQNDAGSLTSRIVSDTSMVKAIISDRMSVIVQCISSILIATIVSLVVDWRMALVAWAVMPCHFIGGLIQAKSAQG 732 (1139)
Q Consensus 653 ~ff~~~~~~~G~i~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~~~~~p~~~~~~~~~~~~~~~ 732 (1139)
+||+ .+++|++++|+ +|++.+++++...+..++..++.+++.++++++++|.+++++++.+|+++++.++..+..++
T Consensus 228 ~~f~--~~~~g~~~~rl-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~~~~~i~~~~~~~~~~ 304 (694)
T TIGR01846 228 GYFE--SRRVGDTVARV-RELEQIRNFLTGSALTVVLDLLFVVVFLAVMFFYSPTLTGVVIGSLVCYALLSVFVGPILRK 304 (694)
T ss_pred HHcC--CCCHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999 68899999999 69999999988777777766666666678889999999999999999888888877777776
Q ss_pred hhhhHHHHHHHHHHHHHHhhcchHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 733 FSGDSAAAHTEFISLTSESASNIRTVASFCHEENILQKAKISLEKTKRSSRKESIKYGVIQGFSLCLWNIAHAVALWYTA 812 (1139)
Q Consensus 733 ~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 812 (1139)
..++..+...+..+.+.|+++|+++||+++.|+.+.++|.+..++..+...+..........+...+..+..++++|+|+
T Consensus 305 ~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~il~~g~ 384 (694)
T TIGR01846 305 RVEDKFERSAAATSFLVESVTGIETIKATATEPQFQNRWDRQLAAYVAASFRVTNLGNIAGQAIELIQKLTFAILLWFGA 384 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 66777777788899999999999999999999999999999999998888888777777777777778888888999999
Q ss_pred HHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCccccEEEEeEE
Q 048639 813 VLIDKKQATFRDGIRAYQIFSLTVPSITELWTLIPTVISAITVLAPAFEILDRKTEIEPDAPESSESGRIKGRIEFQNIK 892 (1139)
Q Consensus 813 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~nvs 892 (1139)
+++..|.+++|.++++..+......++..+...+..+..+..+.+|+.++++.+++.+.. .....+...|.|+|+||+
T Consensus 385 ~lv~~g~it~G~lia~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~--~~~~~~~~~~~i~~~~vs 462 (694)
T TIGR01846 385 HLVIGGALSPGQLVAFNMLAGRVTQPVLRLAQLWQDFQQTGIALERLGDILNSPTEPRSA--GLAALPELRGAITFENIR 462 (694)
T ss_pred HHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCccCC--CCCCCCCCCCeEEEEEEE
Confidence 999999999999999999999999999999999999999999999999999876553321 111122345789999999
Q ss_pred EECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhceEEccccc
Q 048639 893 FNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQIGLVQQEPL 972 (1139)
Q Consensus 893 f~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~~V~Qdp~ 972 (1139)
|+|++. +.++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|++||+|+++++.+++|++++||||||.
T Consensus 463 f~y~~~-~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~~G~I~idg~~i~~~~~~~~r~~i~~v~q~~~ 541 (694)
T TIGR01846 463 FRYAPD-SPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQHGQVLVDGVDLAIADPAWLRRQMGVVLQENV 541 (694)
T ss_pred EEcCCC-CccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEehhhCCHHHHHHhCeEEccCCe
Confidence 999743 3469999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccHHHHhccCCCcCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhcCCCCEEEeeccc
Q 048639 973 LFSCSIRNNICYGNEAASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIARTLLKRPAIMLLDEAT 1052 (1139)
Q Consensus 973 LF~gTIreNL~~~~~~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalARALlr~p~ILlLDEaT 1052 (1139)
+|+|||||||.+++|++++++++++++.+++++++.++|+||||.++++|.+||||||||+||||||+++|+||||||||
T Consensus 542 lf~~ti~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~g~~LSgGq~qri~lARall~~~~ililDEpt 621 (694)
T TIGR01846 542 LFSRSIRDNIALCNPGAPFEHVIHAAKLAGAHDFISELPQGYNTEVGEKGANLSGGQRQRIAIARALVGNPRILIFDEAT 621 (694)
T ss_pred ehhhhHHHHHhcCCCCCCHHHHHHHHHHcChHHHHHhCcCccCcEecCCCCCCCHHHHHHHHHHHHHHhCCCEEEEECCC
Confidence 99999999999998889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhcCCEEEEEeCCEEEEecChhHHhhccCChHHHHHH
Q 048639 1053 SALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVINSDVIVVMDKGEVVEMGSHSTLVAESQGVYSRLYQ 1132 (1139)
Q Consensus 1053 S~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~~DrI~vl~~G~ive~G~~~eLl~~~~g~f~~l~~ 1132 (1139)
|+||+++++.+.+.|++.. .++ |+|+||||++++..||+|+||++|+|+|.|+|++|+++ +|.|++|++
T Consensus 622 s~LD~~~~~~i~~~l~~~~---------~~~-t~i~itH~~~~~~~~d~ii~l~~G~i~~~g~~~~l~~~-~~~y~~l~~ 690 (694)
T TIGR01846 622 SALDYESEALIMRNMREIC---------RGR-TVIIIAHRLSTVRACDRIIVLEKGQIAESGRHEELLAL-QGLYARLWQ 690 (694)
T ss_pred cCCCHHHHHHHHHHHHHHh---------CCC-EEEEEeCChHHHHhCCEEEEEeCCEEEEeCCHHHHHHc-CChHHHHHH
Confidence 9999999999999999764 344 59999999999999999999999999999999999987 799999998
Q ss_pred HHh
Q 048639 1133 LQA 1135 (1139)
Q Consensus 1133 ~~~ 1135 (1139)
.|.
T Consensus 691 ~~~ 693 (694)
T TIGR01846 691 QQS 693 (694)
T ss_pred hhc
Confidence 764
No 26
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=3.3e-80 Score=764.20 Aligned_cols=557 Identities=24% Similarity=0.343 Sum_probs=462.5
Q ss_pred hhhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCchhhhh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 560 ERELLRLVVGTVAAAFSGISKPLFGFFIITIGVAYYDPQAKQE--VGWYSLAFSLVGLFSLFTHTLQHYFFGVVGEKAMT 637 (1139)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (1139)
++.++.+.+.+++.++..+.....++++..+++.......... ...+.++++++.++..++.+++.++....+.+...
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (592)
T PRK10790 19 SPWRKPLGLAVLMLWVAAAAEVSGPLLISYFIDNMVAKGNLPLGLVAGLAAAYVGLQLLAAGLHYAQSLLFNRAAVGVVQ 98 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444445555555555555566666666654432111111 11123334555556777788888899999999999
Q ss_pred HHHHHHHHHHHcCCCcccccCCCChhHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Q 048639 638 NLRRTLYTGVLRNEIAWFEKPQNDAGSLTSRIVSDTSMVKAIISDRMSVIVQCISSILIATIVSLVVDWRMALVAWAVMP 717 (1139)
Q Consensus 638 ~l~~~l~~~ll~~~~~ff~~~~~~~G~i~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~~~~~p 717 (1139)
++|.++|+++++.|.+||+ .+++|++++|+++|++.+++.+...+..++..++.+++.++++++++|.+++++++.+|
T Consensus 99 ~lr~~l~~~l~~~~~~~~~--~~~~g~~~~~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~ 176 (592)
T PRK10790 99 QLRTDVMDAALRQPLSAFD--TQPVGQLISRVTNDTEVIRDLYVTVVATVLRSAALIGAMLVAMFSLDWRMALVAIMIFP 176 (592)
T ss_pred HHHHHHHHHHHcCCHHHhC--CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999 67899999999999999999999999999999988888889999999999999888888
Q ss_pred HHHHHHHHHHHhhhchhhhHHHHHHHHHHHHHHhhcchHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH
Q 048639 718 CHFIGGLIQAKSAQGFSGDSAAAHTEFISLTSESASNIRTVASFCHEENILQKAKISLEKTKRSSRKESIKYGVI-QGFS 796 (1139)
Q Consensus 718 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 796 (1139)
+.++...+..+..+...++.++...+...++.|+++|+++||+|+.++.+.+++.+..++..+...+.....+.. ..+.
T Consensus 177 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (592)
T PRK10790 177 AVLVVMVIYQRYSTPIVRRVRAYLADINDGFNEVINGMSVIQQFRQQARFGERMGEASRSHYMARMQTLRLDGFLLRPLL 256 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 887777777777676677777777888999999999999999999999999999988877666655544433332 1222
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 048639 797 LCLWNIAHAVALWYTAVLIDKKQATFRDGIRAYQIFSLTVPSITELWTLIPTVISAITVLAPAFEILDRKTEIEPDAPES 876 (1139)
Q Consensus 797 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~ 876 (1139)
..+..+...+..++++. +..|.++++.++++..+......++..+...+..+..+..+.+|+.++++.+++.... .
T Consensus 257 ~~~~~~~~~~~~~~~~~-~~~g~is~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~-~-- 332 (592)
T PRK10790 257 SLFSALILCGLLMLFGF-SASGTIEVGVLYAFISYLGRLNEPLIELTTQQSMLQQAVVAGERVFELMDGPRQQYGN-D-- 332 (592)
T ss_pred HHHHHHHHHHHHHHHHH-HHCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCCC-C--
Confidence 22222222222222333 5789999999999988888999999999999999999999999999998765432111 1
Q ss_pred CCCCCccccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCC
Q 048639 877 SESGRIKGRIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYN 956 (1139)
Q Consensus 877 ~~~~~~~g~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~ 956 (1139)
..+...+.|+|+||+|+|++ +.++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|.+||+|+++++
T Consensus 333 -~~~~~~~~i~~~~v~f~y~~--~~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~~G~I~idg~~i~~~~ 409 (592)
T PRK10790 333 -DRPLQSGRIDIDNVSFAYRD--DNLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLTEGEIRLDGRPLSSLS 409 (592)
T ss_pred -ccCCCCCeEEEEEEEEEeCC--CCceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEhhhCC
Confidence 11223467999999999974 346999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHhhhceEEccccccccccHHHHhccCCCcCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHH
Q 048639 957 LRRLRSQIGLVQQEPLLFSCSIRNNICYGNEAASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIA 1036 (1139)
Q Consensus 957 l~~lR~~i~~V~Qdp~LF~gTIreNL~~~~~~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalA 1036 (1139)
++.+|++|+||||||.+|+||||+||++++ +++|++++++++++|++++++++|+||||.+||+|.+||||||||||||
T Consensus 410 ~~~l~~~i~~v~Q~~~lF~~Ti~~NI~~~~-~~~d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~g~~LSGGqrQRialA 488 (592)
T PRK10790 410 HSVLRQGVAMVQQDPVVLADTFLANVTLGR-DISEEQVWQALETVQLAELARSLPDGLYTPLGEQGNNLSVGQKQLLALA 488 (592)
T ss_pred HHHHHhheEEEccCCccccchHHHHHHhCC-CCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHHHH
Confidence 999999999999999999999999999997 6899999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhcCCEEEEEeCCEEEEecCh
Q 048639 1037 RTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVINSDVIVVMDKGEVVEMGSH 1116 (1139)
Q Consensus 1037 RALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~~DrI~vl~~G~ive~G~~ 1116 (1139)
|||+++|+|||||||||+||++|++.|++.|++.. .++ |+|+||||++++..||+|++|++|+++|.|+|
T Consensus 489 RaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~---------~~~-tvIivtHr~~~l~~~D~ii~l~~G~i~~~G~~ 558 (592)
T PRK10790 489 RVLVQTPQILILDEATANIDSGTEQAIQQALAAVR---------EHT-TLVVIAHRLSTIVEADTILVLHRGQAVEQGTH 558 (592)
T ss_pred HHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHh---------CCC-EEEEEecchHHHHhCCEEEEEECCEEEEEcCH
Confidence 99999999999999999999999999999999765 344 59999999999999999999999999999999
Q ss_pred hHHhhccCChHHHHHHHHhhc
Q 048639 1117 STLVAESQGVYSRLYQLQAFS 1137 (1139)
Q Consensus 1117 ~eLl~~~~g~f~~l~~~~~~~ 1137 (1139)
+||+++ ++.|++|++.|..+
T Consensus 559 ~~L~~~-~~~y~~l~~~~~~~ 578 (592)
T PRK10790 559 QQLLAA-QGRYWQMYQLQLAG 578 (592)
T ss_pred HHHHhC-CCHHHHHHHHHhhh
Confidence 999987 79999999877543
No 27
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=5.3e-81 Score=695.92 Aligned_cols=515 Identities=31% Similarity=0.456 Sum_probs=444.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccCCCChhHHHHHHHhcHHHHHHHHHHH
Q 048639 604 GWYSLAFSLVGLFSLFTHTLQHYFFGVVGEKAMTNLRRTLYTGVLRNEIAWFEKPQNDAGSLTSRIVSDTSMVKAIISDR 683 (1139)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~~~~ff~~~~~~~G~i~~r~~~D~~~i~~~~~~~ 683 (1139)
...+..|.++.+...++..++.+++.+..++..+..-.+.|.+++.++++||. ...+|.+.+.+.+-...+...+...
T Consensus 74 ~~~~~~y~iar~~s~~F~el~~~vfa~v~q~~iR~~~~~vf~~~~~ld~~~~~--~~~tG~l~~~idRgsraI~~vl~~~ 151 (591)
T KOG0057|consen 74 TALLAGYGIARLGSSVFNELRNFVFAKVAQRVIRDSSSDVFRHLMSLDLSFFL--SRGTGALNRIIDRGSRAISFVLSAM 151 (591)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhhc--CCCcchHHHHHHhhhhHHHHHHHHH
Confidence 34567788888899999999999999999999999999999999999999999 4568999999999999999998888
Q ss_pred HHHHHHHHHHHHHHHHH-HHHHhHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHHHHHHhhcchHHHHhhc
Q 048639 684 MSVIVQCISSILIATIV-SLVVDWRMALVAWAVMPCHFIGGLIQAKSAQGFSGDSAAAHTEFISLTSESASNIRTVASFC 762 (1139)
Q Consensus 684 l~~~~~~~~~~~~~~~~-~~~~~~~l~lv~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~ 762 (1139)
+..+++.++.+...... ..-..+..+++.+..+..+..+.+.....+....++..+++......+.|++.+..+||.||
T Consensus 152 V~~i~p~~~~i~~v~~~l~~~~Ga~~~li~~~~v~~Y~a~Ti~~t~~Rn~fR~~~N~Adn~as~~~~dsL~Nye~VKsfN 231 (591)
T KOG0057|consen 152 VFNIIPTLFEIALVSGILYYKFGAAFALITLGTVGAYAAFTIVVTRWRNRFRKAMNNADNSASRRAYDSLINYEIVKSFN 231 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHhheeEEeehhHHHHHHHHHHhhhhHHHHHHHHHHhhHHHHHHcc
Confidence 88888887776655533 33445555566555555566555555556666677778888889999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 048639 763 HEENILQKAKISLEKTKRSSRKESIKYGVIQGFSLCLWNIAHAVALWYTAVLIDKKQATFRDGIRAYQIFSLTVPSITEL 842 (1139)
Q Consensus 763 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 842 (1139)
.|++..++|...+....+...+.....+........++....+.+.+.+..-+..+.++++++......+.....++..+
T Consensus 232 nE~~Ea~~y~~~l~~~~~~~~~~~~sl~~lnfgQ~~iFsv~~~~im~l~~~gi~~~~mtvgdlv~~n~l~~qL~~~l~~L 311 (591)
T KOG0057|consen 232 NEEYEASRYDGSLKTYERAGLKYSSSLAFLNFGQKAIFSVALTFIMVLGSNGIAAGKMTVGDLVMVNSLLFQLSLPLNFL 311 (591)
T ss_pred cHHHHHHHHHHHHHHHHHhhhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccccccchhhHHHHHHHHHhHHHHH
Confidence 99999999999999999888877776666655555666666777777777778889999999988888888888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCccccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcC
Q 048639 843 WTLIPTVISAITVLAPAFEILDRKTEIEPDAPESSESGRIKGRIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGP 922 (1139)
Q Consensus 843 ~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~ 922 (1139)
...+..+..+..-+...+...+....+... ..+....+|.|+|+||+|.|+ |++++|+|+||+|++||||||||+
T Consensus 312 g~vyr~~~q~l~Dm~~~~~l~~~~~~i~~~---~~~i~~~~~~I~F~dV~f~y~--~k~~iL~gvsf~I~kGekVaIvG~ 386 (591)
T KOG0057|consen 312 GSVYRELRQALTDMRTLFILLEVDEDIQEA---ALPIELFGGSIEFDDVHFSYG--PKRKVLKGVSFTIPKGEKVAIVGS 386 (591)
T ss_pred HHHHHHHHHHHHhHHHHHhhhhhhhhhhhc---cCCcccCCCcEEEEeeEEEeC--CCCceecceeEEecCCCEEEEECC
Confidence 888888888877777766554322221111 112223567899999999996 456799999999999999999999
Q ss_pred CCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhceEEccccccccccHHHHhccCCCcCCHHHHHHHHHHcC
Q 048639 923 SGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQIGLVQQEPLLFSCSIRNNICYGNEAASEAEIVEVSKKAN 1002 (1139)
Q Consensus 923 sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~~V~Qdp~LF~gTIreNL~~~~~~~sd~ei~~al~~~~ 1002 (1139)
|||||||++++|+||+| ++|+|+|||+|+++++++.+|+-||+||||..||++||.+||.||++.+++||+.++||+++
T Consensus 387 nGsGKSTilr~LlrF~d-~sG~I~IdG~dik~~~~~SlR~~Ig~VPQd~~LFndTIl~NI~YGn~sas~eeV~e~~k~a~ 465 (591)
T KOG0057|consen 387 NGSGKSTILRLLLRFFD-YSGSILIDGQDIKEVSLESLRQSIGVVPQDSVLFNDTILYNIKYGNPSASDEEVVEACKRAG 465 (591)
T ss_pred CCCCHHHHHHHHHHHhc-cCCcEEECCeeHhhhChHHhhhheeEeCCcccccchhHHHHhhcCCCCcCHHHHHHHHHHcC
Confidence 99999999999999999 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCC
Q 048639 1003 IHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELAS 1082 (1139)
Q Consensus 1003 l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~ 1082 (1139)
+||.+.++|+||+|.|||+|..||||||||++||||++++|||++||||||+||.+||+.|.++|.+.. .+
T Consensus 466 ~hd~i~~l~~GY~T~VGerG~~LSGGekQrvslaRa~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~~---------~~ 536 (591)
T KOG0057|consen 466 LHDVISRLPDGYQTLVGERGLMLSGGEKQRVSLARAFLKDAPILLLDEATSALDSETEREILDMIMDVM---------SG 536 (591)
T ss_pred cHHHHHhccccchhhHhhcccccccchHHHHHHHHHHhcCCCeEEecCcccccchhhHHHHHHHHHHhc---------CC
Confidence 999999999999999999999999999999999999999999999999999999999999999999743 34
Q ss_pred CeEEEEEecCchhhhcCCEEEEEeCCEEEEecChhHHhhccCChHHHHHHHHhhc
Q 048639 1083 RTTQITVAHRLATVINSDVIVVMDKGEVVEMGSHSTLVAESQGVYSRLYQLQAFS 1137 (1139)
Q Consensus 1083 ~tTvI~IaHrl~ti~~~DrI~vl~~G~ive~G~~~eLl~~~~g~f~~l~~~~~~~ 1137 (1139)
+ |+|+|+||++++++||+|+|||+|+|+|+|+|+||++ +.+.|+++|..|...
T Consensus 537 r-TvI~IvH~l~ll~~~DkI~~l~nG~v~e~gth~ell~-~s~~~~~~w~~~~~~ 589 (591)
T KOG0057|consen 537 R-TVIMIVHRLDLLKDFDKIIVLDNGTVKEYGTHSELLA-PSELYADLWTTQTSS 589 (591)
T ss_pred C-eEEEEEecchhHhcCCEEEEEECCeeEEeccHHHHhh-hhhHHHHHhcccccc
Confidence 4 5999999999999999999999999999999999999 589999999877543
No 28
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=1.8e-79 Score=756.74 Aligned_cols=560 Identities=31% Similarity=0.475 Sum_probs=496.9
Q ss_pred chhhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 559 NERELLRLVVGTVAAAFSGISKPLFGFFIITIGVAYYDPQAKQEVGWYSLAFSLVGLFSLFTHTLQHYFFGVVGEKAMTN 638 (1139)
Q Consensus 559 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 638 (1139)
.++.++.++++++++.+.+++.+..++++..+++............++..+++++.++..++.+++.++....+.+....
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 88 (571)
T TIGR02203 9 VRPYKAGLVLAGVAMILVAATESTLAALLKPLLDDGFGGRDRSVLWWVPLVVIGLAVLRGICSFVSTYLLSWVSNKVVRD 88 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445556666666666666666666666666654443222223344555677777788888899999999999999999
Q ss_pred HHHHHHHHHHcCCCcccccCCCChhHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Q 048639 639 LRRTLYTGVLRNEIAWFEKPQNDAGSLTSRIVSDTSMVKAIISDRMSVIVQCISSILIATIVSLVVDWRMALVAWAVMPC 718 (1139)
Q Consensus 639 l~~~l~~~ll~~~~~ff~~~~~~~G~i~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~~~~~p~ 718 (1139)
+|..+++++++.|.++|+ +.+.|++++|+++|++.+++.+...+..++..++.+++.++++++++|.+++++++.+|+
T Consensus 89 lr~~l~~~~~~~~~~~~~--~~~~g~~~~~l~~di~~i~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~l~~i~l~~~~l 166 (571)
T TIGR02203 89 IRVRMFEKLLGLPVSFFD--RQPTGTLLSRITFDSEQVASAATDAFIVLVRETLTVIGLFIVLLYYSWQLTLIVVVMLPV 166 (571)
T ss_pred HHHHHHHHHHcCCHHHhC--CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 999999999999999999 678999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhchhhhHHHHHHHHHHHHHHhhcchHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 719 HFIGGLIQAKSAQGFSGDSAAAHTEFISLTSESASNIRTVASFCHEENILQKAKISLEKTKRSSRKESIKYGVIQGFSLC 798 (1139)
Q Consensus 719 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 798 (1139)
.+++..+..+..+...++..+...+..+.+.|.++|+++||+++.++.+.+++.+..++..+...+.....+....+...
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (571)
T TIGR02203 167 LSILMRRVSKRLRRISKEIQNSMGQVTTVAEETLQGYRVVKLFGGQAYETRRFDAVSNRNRRLAMKMTSAGSISSPITQL 246 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99888888888888888888888999999999999999999999999999999999999988888887777777777777
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCC
Q 048639 799 LWNIAHAVALWYTAVLIDKKQATFRDGIRAYQIFSLTVPSITELWTLIPTVISAITVLAPAFEILDRKTEIEPDAPESSE 878 (1139)
Q Consensus 799 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~~~ 878 (1139)
+..+..++.+++|++++..|.+++|.++++..++.....++..+...+..+..+..+.+|+.++++.+++.+... ..
T Consensus 247 ~~~~~~~~~~~~g~~~~~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~---~~ 323 (571)
T TIGR02203 247 IASLALAVVLFIALFQAQAGSLTAGDFTAFITAMIALIRPLKSLTNVNAPMQRGLAAAESLFTLLDSPPEKDTGT---RA 323 (571)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCC---CC
Confidence 778888889999999999999999999999999999999999999999999999999999999997655432111 11
Q ss_pred CCCccccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChH
Q 048639 879 SGRIKGRIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLR 958 (1139)
Q Consensus 879 ~~~~~g~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~ 958 (1139)
..+..+.|+++||+|+|+++ +.++|+|+||+|++||+++|+|+||||||||+++|+|+|+|++|+|++||+|+++++.+
T Consensus 324 ~~~~~~~i~~~~v~f~y~~~-~~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~~G~I~i~g~~i~~~~~~ 402 (571)
T TIGR02203 324 IERARGDVEFRNVTFRYPGR-DRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSGQILLDGHDLADYTLA 402 (571)
T ss_pred CCCCCCeEEEEEEEEEcCCC-CCccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEeHHhcCHH
Confidence 11234679999999999754 45799999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhceEEccccccccccHHHHhccCCC-cCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHH
Q 048639 959 RLRSQIGLVQQEPLLFSCSIRNNICYGNE-AASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIAR 1037 (1139)
Q Consensus 959 ~lR~~i~~V~Qdp~LF~gTIreNL~~~~~-~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalAR 1037 (1139)
++|++++||||||++|+|||||||.++++ +.+|++++++++.+++++++.++|+||||++||+|.+|||||||||||||
T Consensus 403 ~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~g~~LSgGqrQRiaLAR 482 (571)
T TIGR02203 403 SLRRQVALVSQDVVLFNDTIANNIAYGRTEQADRAEIERALAAAYAQDFVDKLPLGLDTPIGENGVLLSGGQRQRLAIAR 482 (571)
T ss_pred HHHhhceEEccCcccccccHHHHHhcCCCCCCCHHHHHHHHHHcChHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHH
Confidence 99999999999999999999999999986 79999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhcCCEEEEEeCCEEEEecChh
Q 048639 1038 TLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVINSDVIVVMDKGEVVEMGSHS 1117 (1139)
Q Consensus 1038 ALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~~DrI~vl~~G~ive~G~~~ 1117 (1139)
|++++|+|||||||||+||++|++.|.+.|++.. +++ |+|+||||++.+..||+|++|++|+++|.|+|+
T Consensus 483 all~~~~illLDEpts~LD~~~~~~i~~~L~~~~---------~~~-tiIiitH~~~~~~~~D~ii~l~~g~i~~~g~~~ 552 (571)
T TIGR02203 483 ALLKDAPILILDEATSALDNESERLVQAALERLM---------QGR-TTLVIAHRLSTIEKADRIVVMDDGRIVERGTHN 552 (571)
T ss_pred HHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHh---------CCC-EEEEEehhhHHHHhCCEEEEEeCCEEEeeCCHH
Confidence 9999999999999999999999999999999764 344 599999999999999999999999999999999
Q ss_pred HHhhccCChHHHHHHHHh
Q 048639 1118 TLVAESQGVYSRLYQLQA 1135 (1139)
Q Consensus 1118 eLl~~~~g~f~~l~~~~~ 1135 (1139)
+|+++ ++.|++++..+.
T Consensus 553 ~l~~~-~~~~~~~~~~~~ 569 (571)
T TIGR02203 553 ELLAR-NGLYAQLHNMQF 569 (571)
T ss_pred HHHHc-CCHHHHHHHHhh
Confidence 99986 799999988663
No 29
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1e-79 Score=685.54 Aligned_cols=505 Identities=25% Similarity=0.373 Sum_probs=426.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccCCCChhHHHHHHHhcHHHHHHHHHHHHHHHHHHH
Q 048639 612 LVGLFSLFTHTLQHYFFGVVGEKAMTNLRRTLYTGVLRNEIAWFEKPQNDAGSLTSRIVSDTSMVKAIISDRMSVIVQCI 691 (1139)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~~~~ff~~~~~~~G~i~~r~~~D~~~i~~~~~~~l~~~~~~~ 691 (1139)
++++...+..+...++.+....++..++|.++|+++...+..-.. .-..|+++||+..|++.+|+.+-..+...+..+
T Consensus 66 ~~aI~Rt~~RY~ERlvsH~AtfrvL~~lRv~~f~kl~p~sp~~~~--r~r~gdLL~RLvaDVd~Ld~lyLRvi~P~~~a~ 143 (573)
T COG4987 66 GLAILRTAARYVERLVSHDATFRVLSALRVRLFEKLEPLSPALLL--RYRSGDLLNRLVADVDALDNLYLRVIAPAVVAL 143 (573)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhccCChHHHH--hcChHhHHHHHHhhHHHHhhHHHHHHhhHHHHH
Confidence 456777777888888888888999999999999999988877777 456899999999999999999988888888877
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHH-HHHHHHHHHHHHHhhhchhhhHHHHHHHHHHHHHHhhcchHHHHhhcchHHHHHH
Q 048639 692 SSILIATIVSLVVDWRMALVAWAV-MPCHFIGGLIQAKSAQGFSGDSAAAHTEFISLTSESASNIRTVASFCHEENILQK 770 (1139)
Q Consensus 692 ~~~~~~~~~~~~~~~~l~lv~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~ 770 (1139)
+..++..+...+++|.+++.+..+ +.+.+++..++.++.++..+......+.+.+++.|.+.|....+.||+++.+.+.
T Consensus 144 ~~~~~~~i~L~f~~~~~Alll~~~ll~~lli~P~~~~~~~~~~~~~l~~~r~~lr~~~td~v~G~~EL~~~g~~~~~~~~ 223 (573)
T COG4987 144 VLIAVVTIGLSFFSIPLALLLGLILLLLLLIIPTLFYRAGRKFGAHLAQGRAALRSQFTDWVQGQAELLIFGAEDAYRTA 223 (573)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhHHHHHHcccHHHHHHH
Confidence 777777777767788877665544 4456666777788888888888888999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHH-HHHHHH
Q 048639 771 AKISLEKTKRSSRKESIKYGVIQGFSLCLWNIAHAVALWYTAVLIDKKQATFRDGIRAYQIFSLTVPSITELW-TLIPTV 849 (1139)
Q Consensus 771 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 849 (1139)
+.+..+...+...+......+.....+++..+..+..+.+.+..+..|..+......+++.......++.-+. ..+...
T Consensus 224 l~~~e~~~~~~q~k~~~~~~~~~a~~~l~~g~~v~~~l~w~a~~~~~G~~~~~~aa~~ll~~f~~~eaf~~L~~~A~~~l 303 (573)
T COG4987 224 LEATEASWLKAQRKQARFTGLSDAILLLIAGLLVIGLLLWMAAQVGAGALAQPGAALALLVIFAALEAFEPLAPGAFQHL 303 (573)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCcchhHHHHHHHHHHHHHHHHhhhcchhHHHh
Confidence 9999888888888777776666666666655555533333333444555553333333333233333333333 455677
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCccccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHH
Q 048639 850 ISAITVLAPAFEILDRKTEIEPDAPESSESGRIKGRIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSS 929 (1139)
Q Consensus 850 ~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKST 929 (1139)
.+...+..|+.++.+.+++...+.++. +...-.++++||+|+||+. ..++|+|+||++++||||||+|||||||||
T Consensus 304 gq~~~Sa~Rl~~i~~q~~e~~~~~~~~---~~~~~~l~~~~vsF~y~~~-~~~~L~~~~l~l~~GEkvAIlG~SGsGKST 379 (573)
T COG4987 304 GQVIASARRLNDILDQKPEVTFPDEQT---ATTGQALELRNVSFTYPGQ-QTKALKNFNLTLAQGEKVAILGRSGSGKST 379 (573)
T ss_pred hHHHHHHHHHhhhccCCcccCCCcccc---CCccceeeeccceeecCCC-ccchhhccceeecCCCeEEEECCCCCCHHH
Confidence 788899999999998877665431111 1111279999999999865 458999999999999999999999999999
Q ss_pred HHHHHhccccCCccEEEECCcccCCCChHHHhhhceEEccccccccccHHHHhccCCCcCCHHHHHHHHHHcCchHHHhh
Q 048639 930 VLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQIGLVQQEPLLFSCSIRNNICYGNEAASEAEIVEVSKKANIHDFISS 1009 (1139)
Q Consensus 930 L~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~~V~Qdp~LF~gTIreNL~~~~~~~sd~ei~~al~~~~l~~~i~~ 1009 (1139)
++++|.|-|+|++|+|.++|.+++.++.+.+|+.|++++|.++||++|+|+||.+++|++||||+|++++++||++++++
T Consensus 380 llqLl~~~~~~~~G~i~~~g~~~~~l~~~~~~e~i~vl~Qr~hlF~~Tlr~NL~lA~~~AsDEel~~aL~qvgL~~l~~~ 459 (573)
T COG4987 380 LLQLLAGAWDPQQGSITLNGVEIASLDEQALRETISVLTQRVHLFSGTLRDNLRLANPDASDEELWAALQQVGLEKLLES 459 (573)
T ss_pred HHHHHHhccCCCCCeeeECCcChhhCChhhHHHHHhhhccchHHHHHHHHHHHhhcCCCCCHHHHHHHHHHcCHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCCCCCChHHHHHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEE
Q 048639 1010 LPDGYDTVVGEKGCQLSGGQKQRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITV 1089 (1139)
Q Consensus 1010 lp~gldt~v~e~G~~LSgGQrQrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~I 1089 (1139)
.|+||+|.+||+|..||||||||++|||+||++.|++||||||.+||++||++|.+.|.+.. +++| +|+|
T Consensus 460 ~p~gl~t~lge~G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~---------~~kT-ll~v 529 (573)
T COG4987 460 APDGLNTWLGEGGRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHA---------EGKT-LLMV 529 (573)
T ss_pred ChhhhhchhccCCCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHh---------cCCe-EEEE
Confidence 99999999999999999999999999999999999999999999999999999999998765 4455 9999
Q ss_pred ecCchhhhcCCEEEEEeCCEEEEecChhHHhhccCChHHHHHHH
Q 048639 1090 AHRLATVINSDVIVVMDKGEVVEMGSHSTLVAESQGVYSRLYQL 1133 (1139)
Q Consensus 1090 aHrl~ti~~~DrI~vl~~G~ive~G~~~eLl~~~~g~f~~l~~~ 1133 (1139)
|||+..+..||||+|||+|+++|+|+|++|+++ +|.|++|++.
T Consensus 530 THrL~~le~~drIivl~~Gkiie~G~~~~Ll~~-~g~~~~l~q~ 572 (573)
T COG4987 530 THRLRGLERMDRIIVLDNGKIIEEGTHAELLAN-NGRYKRLYQL 572 (573)
T ss_pred ecccccHhhcCEEEEEECCeeeecCCHHhhhcc-ccHHHHHhcc
Confidence 999999999999999999999999999999996 8999999863
No 30
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=5.1e-79 Score=801.30 Aligned_cols=574 Identities=31% Similarity=0.466 Sum_probs=504.2
Q ss_pred ccchhhHHHHhhchhhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 547 RTTIFFRIWFCLNERELLRLVVGTVAAAFSGISKPLFGFFIITIGVAYYDPQAKQEVGWYSLAFSLVGLFSLFTHTLQHY 626 (1139)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (1139)
....++.+|.+..+..+..++++++++.+.++..|+++++++.+++..... .....+++.+++++++.+++.+++.+
T Consensus 43 ~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~p~~~~i~g~iid~~~~~---~~~~~~~~~~~~~~i~~~~~~~~~~~ 119 (1466)
T PTZ00265 43 QKIPFFLPFKCLPASHRKLLGVSFVCATISGGTLPFFVSVFGVIMKNMNLG---ENVNDIIFSLVLIGIFQFILSFISSF 119 (1466)
T ss_pred ccccHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---chHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344567776666677788888999999999999999999998888765321 12334556677778888899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCcccccCCCChhHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 048639 627 FFGVVGEKAMTNLRRTLYTGVLRNEIAWFEKPQNDAGSLTSRIVSDTSMVKAIISDRMSVIVQCISSILIATIVSLVVDW 706 (1139)
Q Consensus 627 ~~~~~~~~~~~~l~~~l~~~ll~~~~~ff~~~~~~~G~i~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 706 (1139)
++.+.+.+...++|.++|++++++|++||| .++.|++++|++.|++.++..+...+..++..++.++++++++++++|
T Consensus 120 ~~~~~~~~~~~~lR~~~~~~ll~~~~~~fd--~~~~~~l~s~l~~d~~~i~~~i~~~~~~~~~~~~~~i~~~i~~~~~sw 197 (1466)
T PTZ00265 120 CMDVVTTKILKTLKLEFLKSVFYQDGQFHD--NNPGSKLTSDLDFYLEQVNAGIGTKFITIFTYASAFLGLYIWSLFKNA 197 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCHHHHc--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 999999999999999999999999999999 578899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHHHHHHhhcchHHHHhhcchHHHHHHHHHHHHHHHHHHHHHH
Q 048639 707 RMALVAWAVMPCHFIGGLIQAKSAQGFSGDSAAAHTEFISLTSESASNIRTVASFCHEENILQKAKISLEKTKRSSRKES 786 (1139)
Q Consensus 707 ~l~lv~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 (1139)
.+++++++++|+++++..+..+..+...+..+...++..+.+.|+++|+++||+|+.|+.+.++|.+..+...+...+..
T Consensus 198 ~Lalv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~f~~~~~~~~~~~~k~~ 277 (1466)
T PTZ00265 198 RLTLCITCVFPLIYICGVICNKKVKINKKTSLLYNNNTMSIIEEALVGIRTVVSYCGEKTILKKFNLSEKLYSKYILKAN 277 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhccCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998888888877777777777889999999999999999999999999999999998888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 787 IKYGVIQGFSLCLWNIAHAVALWYTAVLIDKK--------QATFRDGIRAYQIFSLTVPSITELWTLIPTVISAITVLAP 858 (1139)
Q Consensus 787 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 858 (1139)
...+...++...+.++.+++.+|+|++++..| .++++.+++++.........+..+...+..+..+..+.+|
T Consensus 278 ~~~~~~~~~~~~~~~~~~~l~~~~G~~lv~~g~~~~~~~~~~t~g~v~~~~~~~l~~~~~l~~i~~~~~~~~~a~~a~~r 357 (1466)
T PTZ00265 278 FMESLHIGMINGFILASYAFGFWYGTRIIISDLSNQQPNNDFHGGSVISILLGVLISMFMLTIILPNITEYMKSLEATNS 357 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888788888888888999999999999875 4677777766666555556666777788899999999999
Q ss_pred HHHHhccCCCCCCCCCCCCCCCCccccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccc
Q 048639 859 AFEILDRKTEIEPDAPESSESGRIKGRIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFY 938 (1139)
Q Consensus 859 i~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~ 938 (1139)
+++.++.+++.++.. .....+. .+.|+|+||+|+|+++++.++|+|+||+|++||++|||||||||||||+++|+|+|
T Consensus 358 i~~ii~~~~~~~~~~-~~~~~~~-~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~ 435 (1466)
T PTZ00265 358 LYEIINRKPLVENND-DGKKLKD-IKKIQFKNVRFHYDTRKDVEIYKDLNFTLTEGKTYAFVGESGCGKSTILKLIERLY 435 (1466)
T ss_pred HHHHHcCCCCCCCCC-CCccCCC-CCcEEEEEEEEEcCCCCCCceeccceEEEcCCCEEEEECCCCCCHHHHHHHHHHhc
Confidence 999998877643211 1111111 24799999999998765567999999999999999999999999999999999999
Q ss_pred cCCccEEEE-CCcccCCCChHHHhhhceEEccccccccccHHHHhccCCC------------------------------
Q 048639 939 DPNEGIILI-DGKGIKEYNLRRLRSQIGLVQQEPLLFSCSIRNNICYGNE------------------------------ 987 (1139)
Q Consensus 939 ~p~~G~I~i-dG~di~~~~l~~lR~~i~~V~Qdp~LF~gTIreNL~~~~~------------------------------ 987 (1139)
+|++|+|++ ||.|+++++.+++|++|+||||+|.||++||+|||.++.+
T Consensus 436 ~p~~G~I~i~~g~~i~~~~~~~lr~~Ig~V~Q~~~LF~~TI~eNI~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 (1466)
T PTZ00265 436 DPTEGDIIINDSHNLKDINLKWWRSKIGVVSQDPLLFSNSIKNNIKYSLYSLKDLEALSNYYNEDGNDSQENKNKRNSCR 515 (1466)
T ss_pred cCCCCeEEEeCCcchhhCCHHHHHHhccEecccccchhccHHHHHHhcCCCccccchhcccccccccccccccccccccc
Confidence 999999999 6799999999999999999999999999999999998631
Q ss_pred ---------------------------cCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhc
Q 048639 988 ---------------------------AASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIARTLL 1040 (1139)
Q Consensus 988 ---------------------------~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalARALl 1040 (1139)
..+|++++++++.+++++|+.++|+||||.+|++|.+|||||||||||||||+
T Consensus 516 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~a~~~~~l~~~i~~lp~g~dT~vg~~g~~LSGGQkQRiaIARAll 595 (1466)
T PTZ00265 516 AKCAGDLNDMSNTTDSNELIEMRKNYQTIKDSEVVDVSKKVLIHDFVSALPDKYETLVGSNASKLSGGQKQRISIARAII 595 (1466)
T ss_pred ccccchhhhcccccchhhhhhcccccccCCHHHHHHHHHHhCcHHHHHhCccccCceeCCCCCcCCHHHHHHHHHHHHHh
Confidence 35778999999999999999999999999999999999999999999999999
Q ss_pred CCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhcCCEEEEEeCC------------
Q 048639 1041 KRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVINSDVIVVMDKG------------ 1108 (1139)
Q Consensus 1041 r~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~~DrI~vl~~G------------ 1108 (1139)
++|+|||||||||+||+++++.|++.|++... .+++|+|+||||++++..||+|+||++|
T Consensus 596 ~~P~ILlLDEpTSaLD~~se~~i~~~L~~~~~--------~~g~TvIiIsHrls~i~~aD~Iivl~~g~~g~~~~~~~~~ 667 (1466)
T PTZ00265 596 RNPKILILDEATSSLDNKSEYLVQKTINNLKG--------NENRITIIIAHRLSTIRYANTIFVLSNRERGSTVDVDIIG 667 (1466)
T ss_pred cCCCEEEEeCcccccCHHHHHHHHHHHHHHhh--------cCCCEEEEEeCCHHHHHhCCEEEEEeCCcccccccccccc
Confidence 99999999999999999999999999997641 1234699999999999999999999986
Q ss_pred -----------------------------------EEEEecChhHHhhccCChHHHHHHHHh
Q 048639 1109 -----------------------------------EVVEMGSHSTLVAESQGVYSRLYQLQA 1135 (1139)
Q Consensus 1109 -----------------------------------~ive~G~~~eLl~~~~g~f~~l~~~~~ 1135 (1139)
+|+|+|+|+||+++.+|.|+.|++.|.
T Consensus 668 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ive~Gth~~L~~~~~g~y~~l~~~q~ 729 (1466)
T PTZ00265 668 EDPTKDNKENNNKNNKDDNNNNNNNNNNKINNAGSYIIEQGTHDALMKNKNGIYYTMINNQK 729 (1466)
T ss_pred ccccccccccccccccccccccccccccccccCCceeEeeCCHHHHHhccCCcHHHHHhhhc
Confidence 599999999999856999999998774
No 31
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=2.2e-79 Score=756.89 Aligned_cols=470 Identities=22% Similarity=0.292 Sum_probs=416.3
Q ss_pred HcCCcccccccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 21 IGGEVGAFDTDLSTGKVITGVSSHMSVIRDAIGEKLGHFLSSFATFFSGVLIAVICCWEVSLLIFLVVPMILVIGATYTK 100 (1139)
Q Consensus 21 l~~~~~~f~~~~~~G~l~~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~l~~l~~~~~~~~~~~~~~~ 100 (1139)
+++|.+||+++ ++|++++|+++|++.+++++...+..++..++.+++.++++++++|.+++++++++|+++++..++.+
T Consensus 107 l~~~~~~~~~~-~~g~l~s~~~~dv~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~~~~~~~~~~~~~~~ 185 (588)
T PRK11174 107 QQLGPAWIQGK-PAGSWATLVLEQVEDMHDFYARYLPQMALAVLVPLLILIAVFPINWAAGLILLGTAPLIPLFMALVGM 185 (588)
T ss_pred HhcCchhhccC-CHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999987 89999999999999999999999999999998999999999999999999999999999888899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 101 RMNAVSATKLLYLSEATSMIEQTISQIKTVFAFVGERSEIKSFSDCMDKQIIISRGEALIKGVGLGMFQSVTFCCWALII 180 (1139)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (1139)
+.++..++.++..++.++.+.|.++|+++||+|++|+.+.++|.+..++..+...+..+......++..++..+..++++
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (588)
T PRK11174 186 GAADANRRNFLALARLSGHFLDRLRGLETLRLFNRGEAETESIRSASEDFRQRTMEVLRMAFLSSAVLEFFASISIALVA 265 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998888877777766666666655555554444
Q ss_pred HHHHHHHHhCCCCHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccCCCCcccc
Q 048639 181 WVGAVVVTAKRSTGGEV---------LAAVMSILFGAIALTYAAPDMQVFNQAKAAGFEIFQVIQRKPRISYSSKGKELE 251 (1139)
Q Consensus 181 ~~g~~~v~~~~l~~g~~---------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~~~~~ 251 (1139)
+++++.+. |.+|.|.+ ++++.+......|+..+...+..++++..+++|+.++++.+++.........+.
T Consensus 266 ~~~~~~~~-g~~t~G~l~~~~~~~~~~~~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~~~~~ 344 (588)
T PRK11174 266 VYFGFSYL-GELNFGHYGTGVTLFAGFFVLILAPEFYQPLRDLGTFYHAKAQAVGAAESLVTFLETPLAHPQQGEKELAS 344 (588)
T ss_pred HHHHHHHh-cccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccccCC
Confidence 55555443 77777754 222234445567899999999999999999999999998654321111101111
Q ss_pred CCCccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHH
Q 048639 252 KIDGNIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSL 331 (1139)
Q Consensus 252 ~~~~~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~ 331 (1139)
...+.|+++||+|.|++ ++++|+|+||+++|||++|||||||||||||+++|+|+| |++|+|.+||+|+++++.+++
T Consensus 345 ~~~~~i~~~~vsf~~~~--~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p~~G~I~i~g~~i~~~~~~~l 421 (588)
T PRK11174 345 NDPVTIEAEDLEILSPD--GKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-PYQGSLKINGIELRELDPESW 421 (588)
T ss_pred CCCceEEEEeeEEeccC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-CCCcEEEECCEecccCCHHHH
Confidence 12346999999987763 357999999999999999999999999999999999999 999999999999999999999
Q ss_pred hcceEEEecCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHc
Q 048639 332 RKNIGAVSQEPSLFTGSLMDNIKVGNMDADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIV 411 (1139)
Q Consensus 332 ~~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~ 411 (1139)
|++|+||||+|+||++||+|||.+|+|++++++++++|+.++++++++++|+|+||.+||+|.+|||||||||+||||++
T Consensus 422 r~~i~~v~Q~~~LF~~TI~eNI~~g~~~~~~eei~~al~~a~l~~~i~~lp~G~dT~vge~G~~LSGGQrQRialARAll 501 (588)
T PRK11174 422 RKHLSWVGQNPQLPHGTLRDNVLLGNPDASDEQLQQALENAWVSEFLPLLPQGLDTPIGDQAAGLSVGQAQRLALARALL 501 (588)
T ss_pred HhheEEecCCCcCCCcCHHHHhhcCCCCCCHHHHHHHHHHhCHHHHHHhcccccccccccCCCCCCHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhccCEEEEEeCcEEEEecChhhhhccchHHHHHH
Q 048639 412 KNPPILLLDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVNADMIAVVEDGQVTETGTHHSLLQTSDFYNRLF 491 (1139)
Q Consensus 412 ~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~ 491 (1139)
+||+|||||||||+||+++++.+.+.++++.+++|+|+||||++++..||+|++|++|+++++|+|+||+++++.|++++
T Consensus 502 ~~~~IliLDE~TSaLD~~te~~i~~~l~~~~~~~TvIiItHrl~~i~~aD~Iivl~~G~i~e~G~~~eL~~~~~~y~~l~ 581 (588)
T PRK11174 502 QPCQLLLLDEPTASLDAHSEQLVMQALNAASRRQTTLMVTHQLEDLAQWDQIWVMQDGQIVQQGDYAELSQAGGLFATLL 581 (588)
T ss_pred cCCCEEEEeCCccCCCHHHHHHHHHHHHHHhCCCEEEEEecChHHHHhCCEEEEEeCCeEeecCCHHHHHhcchHHHHHH
Confidence 99999999999999999999999999999888999999999999999999999999999999999999999999999998
Q ss_pred hhcc
Q 048639 492 TMQN 495 (1139)
Q Consensus 492 ~~~~ 495 (1139)
..|.
T Consensus 582 ~~q~ 585 (588)
T PRK11174 582 AHRQ 585 (588)
T ss_pred HHhh
Confidence 7653
No 32
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=4.1e-78 Score=744.93 Aligned_cols=562 Identities=31% Similarity=0.507 Sum_probs=479.4
Q ss_pred hhhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 560 ERELLRLVVGTVAAAFSGISKPLFGFFIITIGVAYYDPQAKQEVGWYSLAFSLVGLFSLFTHTLQHYFFGVVGEKAMTNL 639 (1139)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 639 (1139)
++.+..+.+.+++.++..+.....++++..+++.............+..+++++.++..+..+++.++....+.+....+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 93 (576)
T TIGR02204 14 RPYRGRVLAALVALLITAAATLSLPYAVRLMIDHGFSKDSSGLLNRYFAFLLVVALVLALGTAARFYLVTWLGERVVADI 93 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344444444455555555555556666666543322211223334444555555666777888888899999999999
Q ss_pred HHHHHHHHHcCCCcccccCCCChhHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Q 048639 640 RRTLYTGVLRNEIAWFEKPQNDAGSLTSRIVSDTSMVKAIISDRMSVIVQCISSILIATIVSLVVDWRMALVAWAVMPCH 719 (1139)
Q Consensus 640 ~~~l~~~ll~~~~~ff~~~~~~~G~i~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~~~~~p~~ 719 (1139)
|..+++++++.|.++|+ ..+.|++++|+++|++.+++.+...+..++..++.+++++++++.++|.+++++++.+|+.
T Consensus 94 r~~l~~~l~~~~~~~~~--~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~l~ 171 (576)
T TIGR02204 94 RRAVFAHLISLSPSFFD--KNRSGEVVSRLTTDTTLLQSVIGSSLSMALRNALMCIGGLIMMFITSPKLTSLVLLAVPLV 171 (576)
T ss_pred HHHHHHHHHcCCHHHHc--cCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 99999999999999998 5778999999999999999999998989889999999999999999999999998888888
Q ss_pred HHHHHHHHHhhhchhhhHHHHHHHHHHHHHHhhcchHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 720 FIGGLIQAKSAQGFSGDSAAAHTEFISLTSESASNIRTVASFCHEENILQKAKISLEKTKRSSRKESIKYGVIQGFSLCL 799 (1139)
Q Consensus 720 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 (1139)
++..++..+..++..++..+...+..+++.|.++|+++||+++.++.+.+++.+..++..+...+..........+...+
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (576)
T TIGR02204 172 LLPILLFGRRVRKLSRESQDRIADAGSYAGETLGAIRTVQAFGHEDAERSRFGGAVEKAYEAARQRIRTRALLTAIVIVL 251 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888788877777888888888899999999999999999999999999999999888777666666555555555555
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCC
Q 048639 800 WNIAHAVALWYTAVLIDKKQATFRDGIRAYQIFSLTVPSITELWTLIPTVISAITVLAPAFEILDRKTEIEPDAPESSES 879 (1139)
Q Consensus 800 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~ 879 (1139)
..+..++.+++|++++..|.++++.++++..+......++..+...+..+..+..+.+|+.++++.+++.+........+
T Consensus 252 ~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~~~~~ 331 (576)
T TIGR02204 252 VFGAIVGVLWVGAHDVIAGKMSAGTLGQFVFYAVMVAGSIGTLSEVWGELQRAAGAAERLIELLQAEPDIKAPAHPKTLP 331 (576)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCCCccCC
Confidence 56667777889999999999999999999888889999999999999999999999999999987654422111111111
Q ss_pred CCccccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHH
Q 048639 880 GRIKGRIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRR 959 (1139)
Q Consensus 880 ~~~~g~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~ 959 (1139)
.+..+.|+|+||+|+||++++.++|+|+||+|+|||+++|+|+||||||||+++|+|+|+|++|+|.+||+|+++++.++
T Consensus 332 ~~~~~~i~~~~v~f~y~~~~~~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~p~~G~I~i~g~~i~~~~~~~ 411 (576)
T TIGR02204 332 VPLRGEIEFEQVNFAYPARPDQPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDPQSGRILLDGVDLRQLDPAE 411 (576)
T ss_pred cCCCceEEEEEEEEECCCCCCCccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEECCEEHHhcCHHH
Confidence 12346799999999998643357999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhceEEccccccccccHHHHhccCCCcCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHh
Q 048639 960 LRSQIGLVQQEPLLFSCSIRNNICYGNEAASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIARTL 1039 (1139)
Q Consensus 960 lR~~i~~V~Qdp~LF~gTIreNL~~~~~~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalARAL 1039 (1139)
+|++++||||||++|+|||||||.+++|+.+|++++++++.+++.++++++|+|+||++||+|.+|||||||||+||||+
T Consensus 412 ~~~~i~~~~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~~~~l~~~~l~~~i~~l~~gl~t~i~~~g~~LSgGq~Qrl~laRal 491 (576)
T TIGR02204 412 LRARMALVPQDPVLFAASVMENIRYGRPDATDEEVEAAARAAHAHEFISALPEGYDTYLGERGVTLSGGQRQRIAIARAI 491 (576)
T ss_pred HHHhceEEccCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCcHHHHHhCCCCCCceeCCCCCcCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999888899999999999999999999999999999999999999999999999999
Q ss_pred cCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhcCCEEEEEeCCEEEEecChhHH
Q 048639 1040 LKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVINSDVIVVMDKGEVVEMGSHSTL 1119 (1139)
Q Consensus 1040 lr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~~DrI~vl~~G~ive~G~~~eL 1119 (1139)
+++|+|||||||||+||++|++.+.+.|++.. +++ |+|+||||++.+..||||++|++|+++|.|+|++|
T Consensus 492 ~~~~~ililDEpts~lD~~~~~~i~~~l~~~~---------~~~-t~IiitH~~~~~~~~d~vi~l~~g~~~~~g~~~~l 561 (576)
T TIGR02204 492 LKDAPILLLDEATSALDAESEQLVQQALETLM---------KGR-TTLIIAHRLATVLKADRIVVMDQGRIVAQGTHAEL 561 (576)
T ss_pred HhCCCeEEEeCcccccCHHHHHHHHHHHHHHh---------CCC-EEEEEecchHHHHhCCEEEEEECCEEEeeecHHHH
Confidence 99999999999999999999999999999764 344 59999999999999999999999999999999999
Q ss_pred hhccCChHHHHHHHH
Q 048639 1120 VAESQGVYSRLYQLQ 1134 (1139)
Q Consensus 1120 l~~~~g~f~~l~~~~ 1134 (1139)
+++ ++.|++|++.|
T Consensus 562 ~~~-~~~~~~l~~~~ 575 (576)
T TIGR02204 562 IAK-GGLYARLARLQ 575 (576)
T ss_pred HHc-CChHHHHHhhc
Confidence 986 89999999765
No 33
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=4.9e-78 Score=743.53 Aligned_cols=558 Identities=28% Similarity=0.410 Sum_probs=468.6
Q ss_pred chhhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 559 NERELLRLVVGTVAAAFSGISKPLFGFFIITIGVAYYDPQAKQEVGWYSLAFSLVGLFSLFTHTLQHYFFGVVGEKAMTN 638 (1139)
Q Consensus 559 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 638 (1139)
.++.+..+.+.+++.++..++....++++..+++..... .....+..+++++.++..+..++..++......+...+
T Consensus 14 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~iid~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (588)
T PRK13657 14 LGAEKRLGILLAVANVLLAAATFAEPILFGRIIDAISGK---GDIFPLLAAWAGFGLFNIIAGVLVARHADRLAHRRRLA 90 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc---ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444444555555555555555566666666544322 11222233333333444444444444445555666666
Q ss_pred HHHHHHHHHHcCCCcccccCCCChhHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Q 048639 639 LRRTLYTGVLRNEIAWFEKPQNDAGSLTSRIVSDTSMVKAIISDRMSVIVQCISSILIATIVSLVVDWRMALVAWAVMPC 718 (1139)
Q Consensus 639 l~~~l~~~ll~~~~~ff~~~~~~~G~i~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~~~~~p~ 718 (1139)
++.++|+++++.|..+|+ +.+.|++++|+++|++.+...+...+..++..++.+++.+++++.++|.+++++++++|+
T Consensus 91 l~~~l~~~l~~~~~~~~~--~~~~g~~~~~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~~l 168 (588)
T PRK13657 91 VLTEYFERIIQLPLAWHS--QRGSGRALHTLLRGTDALFGLWLEFMREHLATLVALVVLLPLALFMNWRLSLVLVVLGIV 168 (588)
T ss_pred HHHHHHHHHHhCCHHHHC--cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777999999999999999 678999999999999999988888888888888888888888899999999999988888
Q ss_pred HHHHHHHHHHhhhchhhhHHHHHHHHHHHHHHhhcchHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 719 HFIGGLIQAKSAQGFSGDSAAAHTEFISLTSESASNIRTVASFCHEENILQKAKISLEKTKRSSRKESIKYGVIQGFSLC 798 (1139)
Q Consensus 719 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 798 (1139)
.+++..+..+..+...++..+...+..+.+.|.++|+++||+|+.++.+.+++.+..++..+...+..........+...
T Consensus 169 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (588)
T PRK13657 169 YTLITTLVMRKTKDGQAAVEEHYHDLFAHVSDAIGNVSVVQSYNRIEAETQALRDIADNLLAAQMPVLSWWALASVLNRA 248 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88777777777776677777777888999999999999999999999999999999998888877777777666777777
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCC
Q 048639 799 LWNIAHAVALWYTAVLIDKKQATFRDGIRAYQIFSLTVPSITELWTLIPTVISAITVLAPAFEILDRKTEIEPDAPESSE 878 (1139)
Q Consensus 799 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~~~ 878 (1139)
+..+..++++++|++++..|.+++|.++++..++.....++..+...+..+..+..+.+|+.++++.+++.+... ...+
T Consensus 249 ~~~~~~~~~~~~g~~~v~~g~lt~g~~~a~~~l~~~~~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~-~~~~ 327 (588)
T PRK13657 249 ASTITMLAILVLGAALVQKGQLRVGEVVAFVGFATLLIGRLDQVVAFINQVFMAAPKLEEFFEVEDAVPDVRDPP-GAID 327 (588)
T ss_pred HHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCC-CCCC
Confidence 777788888999999999999999999999999999999999999999999999999999999987654322111 1111
Q ss_pred CCCccccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChH
Q 048639 879 SGRIKGRIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLR 958 (1139)
Q Consensus 879 ~~~~~g~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~ 958 (1139)
.+...+.|+++||+|+||++ .++|+|+||+++|||++||||+||||||||+++|+|+|+|++|+|.+||+|+++++.+
T Consensus 328 ~~~~~~~I~~~~vsf~y~~~--~~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~~G~I~i~g~~i~~~~~~ 405 (588)
T PRK13657 328 LGRVKGAVEFDDVSFSYDNS--RQGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQSGRILIDGTDIRTVTRA 405 (588)
T ss_pred cCCCCCeEEEEEEEEEeCCC--CceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEEhhhCCHH
Confidence 12234679999999999743 4699999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhceEEccccccccccHHHHhccCCCcCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 048639 959 RLRSQIGLVQQEPLLFSCSIRNNICYGNEAASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIART 1038 (1139)
Q Consensus 959 ~lR~~i~~V~Qdp~LF~gTIreNL~~~~~~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalARA 1038 (1139)
.+|++|+||||||.+|+|||||||.+++|+.+|++++++++.+++++++.++|+|+||.+|++|.+||||||||||||||
T Consensus 406 ~~r~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~d~~i~~al~~~~l~~~i~~lp~gldt~i~~~g~~LSgGq~QRialARa 485 (588)
T PRK13657 406 SLRRNIAVVFQDAGLFNRSIEDNIRVGRPDATDEEMRAAAERAQAHDFIERKPDGYDTVVGERGRQLSGGERQRLAIARA 485 (588)
T ss_pred HHHhheEEEecCcccccccHHHHHhcCCCCCCHHHHHHHHHHhCHHHHHHhCcccccchhcCCCCCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999988899999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhcCCEEEEEeCCEEEEecChhH
Q 048639 1039 LLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVINSDVIVVMDKGEVVEMGSHST 1118 (1139)
Q Consensus 1039 Llr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~~DrI~vl~~G~ive~G~~~e 1118 (1139)
|+++|+|||||||||+||++|++.|++.|++.. ++ +|+|+||||++.+..||||++|++|+++|.|+|++
T Consensus 486 ll~~~~iliLDEpts~LD~~t~~~i~~~l~~~~---------~~-~tvIiitHr~~~~~~~D~ii~l~~G~i~~~g~~~~ 555 (588)
T PRK13657 486 LLKDPPILILDEATSALDVETEAKVKAALDELM---------KG-RTTFIIAHRLSTVRNADRILVFDNGRVVESGSFDE 555 (588)
T ss_pred HhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHh---------cC-CEEEEEEecHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 999999999999999999999999999998764 33 45999999999999999999999999999999999
Q ss_pred HhhccCChHHHHHHHHh
Q 048639 1119 LVAESQGVYSRLYQLQA 1135 (1139)
Q Consensus 1119 Ll~~~~g~f~~l~~~~~ 1135 (1139)
|+++ ++.|++|++.+.
T Consensus 556 l~~~-~~~y~~l~~~~~ 571 (588)
T PRK13657 556 LVAR-GGRFAALLRAQG 571 (588)
T ss_pred HHHC-CChHHHHHHHhh
Confidence 9986 799999998664
No 34
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=5.5e-78 Score=735.05 Aligned_cols=516 Identities=22% Similarity=0.287 Sum_probs=431.9
Q ss_pred hhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCchhhhhHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 561 RELLRLVVGTVAAAFSGISKPLFGFFIITIGVAYYDPQAKQEVGWY--SLAFSLVGLFSLFTHTLQHYFFGVVGEKAMTN 638 (1139)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 638 (1139)
+.++.+++.+++.++..+.....++++...++....... ...++ ...++++.++..++.++..++....+.+...+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (529)
T TIGR02868 10 PRTRRLVVAILLGALALGSAVALLGVSAWLISRAAEMPP--VLYLSVAAVAVRAFGIGRAVFRYLERLVGHDAALRSLGR 87 (529)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcch--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333334444444444444444445555555544322111 11111 11122344556677788888888899999999
Q ss_pred HHHHHHHHHHcCCCcccccCCCChhHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Q 048639 639 LRRTLYTGVLRNEIAWFEKPQNDAGSLTSRIVSDTSMVKAIISDRMSVIVQCISSILIATIVSLVVDWRMALVAWAVMPC 718 (1139)
Q Consensus 639 l~~~l~~~ll~~~~~ff~~~~~~~G~i~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~~~~~p~ 718 (1139)
+|.++|++++++|.+||+ ++++|++++|+++|++.+++.+...+..++..++.+++++++++.++|.+++++++.+|+
T Consensus 88 lr~~~~~~ll~~~~~~~~--~~~~g~~~~~l~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~~~~~ 165 (529)
T TIGR02868 88 LRVRVYDRLARLALAGRR--RFQTGDLLGRLGADVDALQDLYVRVIVPLVVALVVGSAAVAAIALLSVPAALVLAAGLLL 165 (529)
T ss_pred HHHHHHHHhhccCccccc--cCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 999999999999999999 678999999999999999999999999999999999999999999999999998888777
Q ss_pred HHHHH-HHHHHhhhchhhhHHHHHHHHHHHHHHhhcchHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 719 HFIGG-LIQAKSAQGFSGDSAAAHTEFISLTSESASNIRTVASFCHEENILQKAKISLEKTKRSSRKESIKYGVIQGFSL 797 (1139)
Q Consensus 719 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (1139)
+.++. ++..+..+...++.++..++..+++.|.++|+++||+|+.++.+.+++.+..++..+...+.....+....+..
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (529)
T TIGR02868 166 AGFVAPLVSLRAARAAEVALARLRSQLYQQLTDALDGAADLVAYGALDPALAQVEAADRELLAAERRAARATGLGAAAQL 245 (529)
T ss_pred HHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHhccHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 65554 44444445555666677788899999999999999999999999999999999988888887777777777777
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCC-C
Q 048639 798 CLWNIAHAVALWYTAVLIDKKQATFRDGIRAYQIFSLTVPSITELWTLIPTVISAITVLAPAFEILDRKTEIEPDAPE-S 876 (1139)
Q Consensus 798 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~-~ 876 (1139)
.+..+..++++|+|++++..|.++++.+.++..+......++..+...+..+..+..+.+|+.++++.+++.+..... .
T Consensus 246 ~~~~~~~~~~~~~g~~~~~~g~~t~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~~~ 325 (529)
T TIGR02868 246 LAAGLAVLGALWAGGPAVADGTLAPATLAVLVLLPLAAFEAFAPLPAAAQALTRVRAAAERIEEVTGAKGPRPEGVVPAA 325 (529)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCC
Confidence 777778888889999999999999999988888888888889899889999999999999999999876543221111 1
Q ss_pred CCCCCccccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCC
Q 048639 877 SESGRIKGRIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYN 956 (1139)
Q Consensus 877 ~~~~~~~g~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~ 956 (1139)
...++..+.|+|+||+|+|+++ .++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|.+||+|++++
T Consensus 326 ~~~~~~~~~I~~~~vsf~Y~~~--~~vL~~isl~i~~G~~vaIvG~SGsGKSTLl~lL~g~~~p~~G~I~i~g~~i~~~- 402 (529)
T TIGR02868 326 GALGLGKPTLELRDLSFGYPGS--PPVLDGVSLDLPPGERVAILGPSGSGKSTLLMLLTGLLDPLQGEVTLDGVSVSSL- 402 (529)
T ss_pred cccCCCCceEEEEEEEEecCCC--CceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEhhhH-
Confidence 1111234679999999999753 3699999999999999999999999999999999999999999999999999999
Q ss_pred hHHHhhhceEEccccccccccHHHHhccCCCcCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHH
Q 048639 957 LRRLRSQIGLVQQEPLLFSCSIRNNICYGNEAASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIA 1036 (1139)
Q Consensus 957 l~~lR~~i~~V~Qdp~LF~gTIreNL~~~~~~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalA 1036 (1139)
.+++|++++||||||+||+|||||||++++|+++|+++++|++.+++++++.++|+||||++||+|.+||||||||||||
T Consensus 403 ~~~lr~~i~~V~Q~~~lF~~TI~eNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGGQrQRiaiA 482 (529)
T TIGR02868 403 QDELRRRISVFAQDAHLFDTTVRDNLRLGRPDATDEELWAALERVGLADWLRSLPDGLDTVLGEGGARLSGGERQRLALA 482 (529)
T ss_pred HHHHHhheEEEccCcccccccHHHHHhccCCCCCHHHHHHHHHHcCCHHHHHhCcccccchhccccCcCCHHHHHHHHHH
Confidence 99999999999999999999999999999889999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCc
Q 048639 1037 RTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRL 1093 (1139)
Q Consensus 1037 RALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl 1093 (1139)
||++++|+|||||||||+||++||+.|++.|++.. +++ |+|+||||+
T Consensus 483 Rall~~~~iliLDE~TSaLD~~te~~I~~~l~~~~---------~~~-TvIiItHrl 529 (529)
T TIGR02868 483 RALLADAPILLLDEPTEHLDAGTESELLEDLLAAL---------SGK-TVVVITHHL 529 (529)
T ss_pred HHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHhc---------CCC-EEEEEecCC
Confidence 99999999999999999999999999999999764 344 599999996
No 35
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=1.1e-77 Score=735.52 Aligned_cols=515 Identities=25% Similarity=0.376 Sum_probs=455.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccCCCChhHHHHHHHhcHHHHHHHHHHHH
Q 048639 605 WYSLAFSLVGLFSLFTHTLQHYFFGVVGEKAMTNLRRTLYTGVLRNEIAWFEKPQNDAGSLTSRIVSDTSMVKAIISDRM 684 (1139)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~~~~ff~~~~~~~G~i~~r~~~D~~~i~~~~~~~l 684 (1139)
.|..+++++.++..++.++..++....+.+...++|.++|++++++|++||+ ++++|++++|+++|++.++..+...+
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~--~~~~g~i~srl~~Dv~~i~~~~~~~~ 114 (569)
T PRK10789 37 MWIGTMVLIAVVVYLLRYVWRVLLFGASYQLAVELREDFYRQLSRQHPEFYL--RHRTGDLMARATNDVDRVVFAAGEGV 114 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHc--CCCHHHHHHHHHHhHHHHHHHHHHHH
Confidence 3455555556667777788888888899999999999999999999999999 67899999999999999998888888
Q ss_pred HHHHHHHHHHHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHHHHHHhhcchHHHHhhcc
Q 048639 685 SVIVQCISSILIATIVS-LVVDWRMALVAWAVMPCHFIGGLIQAKSAQGFSGDSAAAHTEFISLTSESASNIRTVASFCH 763 (1139)
Q Consensus 685 ~~~~~~~~~~~~~~~~~-~~~~~~l~lv~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~ 763 (1139)
..++..++.++++++++ +.++|.+++++++++|+.+++..+..+..++..++.++..++..+.+.|+++|+++||+|+.
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~ 194 (569)
T PRK10789 115 LTLVDSLVMGCAVLIVMSTQISWQLTLLALLPMPVMAIMIKRYGDQLHERFKLAQAAFSSLNDRTQESLTSIRMIKAFGL 194 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcc
Confidence 88887766666555554 57999999999998999888887777777776777777788889999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 048639 764 EENILQKAKISLEKTKRSSRKESIKYGVIQGFSLCLWNIAHAVALWYTAVLIDKKQATFRDGIRAYQIFSLTVPSITELW 843 (1139)
Q Consensus 764 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 843 (1139)
++.+.++|.+..++..+...+.....+....+......+..++.+++|++++..|.+++|.++++..+......++..+.
T Consensus 195 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~lv~~g~lt~g~l~a~~~~~~~~~~pl~~l~ 274 (569)
T PRK10789 195 EDRQSALFAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAIGGGSWMVVNGSLTLGQLTSFVMYLGLMIWPMLALA 274 (569)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988888777776666666666666666777788899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCccccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCC
Q 048639 844 TLIPTVISAITVLAPAFEILDRKTEIEPDAPESSESGRIKGRIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPS 923 (1139)
Q Consensus 844 ~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~s 923 (1139)
..+..+..+..+.+|+.++++.+++.+... .+.+...+.|+|+||+|+|+.. +.++|+|+||+|+|||++||+|||
T Consensus 275 ~~~~~~~~~~~a~~ri~~ll~~~~~~~~~~---~~~~~~~~~I~~~~v~~~y~~~-~~~~l~~i~~~i~~G~~~~ivG~s 350 (569)
T PRK10789 275 WMFNIVERGSAAYSRIRAMLAEAPVVKDGS---EPVPEGRGELDVNIRQFTYPQT-DHPALENVNFTLKPGQMLGICGPT 350 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcccCCC---CCCCCCCCcEEEEEEEEECCCC-CCccccCeeEEECCCCEEEEECCC
Confidence 999999999999999999998654432111 1112235679999999999753 357999999999999999999999
Q ss_pred CCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhceEEccccccccccHHHHhccCCCcCCHHHHHHHHHHcCc
Q 048639 924 GAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQIGLVQQEPLLFSCSIRNNICYGNEAASEAEIVEVSKKANI 1003 (1139)
Q Consensus 924 GSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~~V~Qdp~LF~gTIreNL~~~~~~~sd~ei~~al~~~~l 1003 (1139)
|||||||+++|+|+|+|++|+|.+||+|+++++.+.+|++++||||+|++|++||||||.++.+++++++++++++.+++
T Consensus 351 GsGKSTLl~ll~g~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~l 430 (569)
T PRK10789 351 GSGKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDSWRSRLAVVSQTPFLFSDTVANNIALGRPDATQQEIEHVARLASV 430 (569)
T ss_pred CCCHHHHHHHHhcccCCCCCEEEECCEEHhhCCHHHHHhheEEEccCCeeccccHHHHHhcCCCCCCHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999888999999999999999
Q ss_pred hHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCC
Q 048639 1004 HDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASR 1083 (1139)
Q Consensus 1004 ~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~ 1083 (1139)
++++.++|+|+||.+|++|.+||||||||++||||++++|+|||||||||+||+++++.+++.|++.. .++
T Consensus 431 ~~~i~~lp~gl~t~~~~~g~~LSgGq~qRi~lARall~~~~illlDEpts~LD~~~~~~i~~~l~~~~---------~~~ 501 (569)
T PRK10789 431 HDDILRLPQGYDTEVGERGVMLSGGQKQRISIARALLLNAEILILDDALSAVDGRTEHQILHNLRQWG---------EGR 501 (569)
T ss_pred HHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHHh---------CCC
Confidence 99999999999999999999999999999999999999999999999999999999999999998764 334
Q ss_pred eEEEEEecCchhhhcCCEEEEEeCCEEEEecChhHHhhccCChHHHHHHHHhh
Q 048639 1084 TTQITVAHRLATVINSDVIVVMDKGEVVEMGSHSTLVAESQGVYSRLYQLQAF 1136 (1139)
Q Consensus 1084 tTvI~IaHrl~ti~~~DrI~vl~~G~ive~G~~~eLl~~~~g~f~~l~~~~~~ 1136 (1139)
|+|+||||++++..||+|++|++|+++|.|+|++|+++ +|.|++|++.|..
T Consensus 502 -tii~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~-~~~y~~l~~~~~~ 552 (569)
T PRK10789 502 -TVIISAHRLSALTEASEILVMQHGHIAQRGNHDQLAQQ-SGWYRDMYRYQQL 552 (569)
T ss_pred -EEEEEecchhHHHcCCEEEEEeCCEEEEecCHHHHHHc-CChHHHHHHHhhh
Confidence 59999999999999999999999999999999999986 7999999987654
No 36
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=1.3e-78 Score=745.39 Aligned_cols=470 Identities=35% Similarity=0.609 Sum_probs=438.7
Q ss_pred HcCCcccccccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 21 IGGEVGAFDTDLSTGKVITGVSSHMSVIRDAIGEKLGHFLSSFATFFSGVLIAVICCWEVSLLIFLVVPMILVIGATYTK 100 (1139)
Q Consensus 21 l~~~~~~f~~~~~~G~l~~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~l~~l~~~~~~~~~~~~~~~ 100 (1139)
++.|.++|+++ ++|++++|+++|++.++..+......+...+..+++.+++++..+|.+++++++..|++.+...++.+
T Consensus 96 ~~~~~~~~~~~-~~g~l~~~~t~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~ 174 (567)
T COG1132 96 LRLPLSFFDKA-KSGDLISRLTNDVEAVSNLVSTVLVLVFTSILLLIGSLVLLFSLSWRLALILLLILPLLALVLSLLAR 174 (567)
T ss_pred HhCCHHHhCcC-CcchHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88899999997 79999999999999999999988666666788889999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 101 RMNAVSATKLLYLSEATSMIEQTISQIKTVFAFVGERSEIKSFSDCMDKQIIISRGEALIKGVGLGMFQSVTFCCWALII 180 (1139)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (1139)
+.++..+..++..++.++.+.|.++|+++||+|+.++.+.+++.+..++..+...+.....+...++..++..+..++++
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (567)
T COG1132 175 KSRKLSRRVREALGELNARLLESLSGIRVIKAFGAEDRELKRFEEANEELRRANLRASRLEALLAPLMLLLSSLGTVLVL 254 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999999999999888888888888888888888888889999
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccCCCCccccCCCccEEEE
Q 048639 181 WVGAVVVTAKRSTGGEVLAAVMSILFGAIALTYAAPDMQVFNQAKAAGFEIFQVIQRKPRISYSSKGKELEKIDGNIDIR 260 (1139)
Q Consensus 181 ~~g~~~v~~~~l~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~~~~~~~~~~i~~~ 260 (1139)
++|.+.+..+.+++|.+.+++.+......|+..+...+..+..+..+.+|++++++.++........ .....+.|+++
T Consensus 255 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~--~~~~~~~I~f~ 332 (567)
T COG1132 255 ALGGFLVLSGSLTVGALAAFILYLLRLLTPILQLGEVVSLLQRASAAAERLFELLDEEPEVEDPPDP--LKDTIGSIEFE 332 (567)
T ss_pred HHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCC--CCCCCCeEEEE
Confidence 9999999999999999999999999999999999999999999999999999999986654222111 22344679999
Q ss_pred eEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcceEEEec
Q 048639 261 DVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNIGAVSQ 340 (1139)
Q Consensus 261 ~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q 340 (1139)
||+|+|++ ++++|+|+||++++||++|||||||||||||+++|+|+|+|++|+|.+||+|+++++.+++|++|+||||
T Consensus 333 ~vsf~y~~--~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~~G~I~idg~dI~~i~~~~lr~~I~~V~Q 410 (567)
T COG1132 333 NVSFSYPG--KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPTSGEILIDGIDIRDISLDSLRKRIGIVSQ 410 (567)
T ss_pred EEEEEcCC--CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCEehhhcCHHHHHHhccEEcc
Confidence 99999974 3579999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHccCCCEEEEe
Q 048639 341 EPSLFTGSLMDNIKVGNMDADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVKNPPILLLD 420 (1139)
Q Consensus 341 ~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~~~~illlD 420 (1139)
+|+||++||+|||.+|+|+++++++++||+.+++++++.++|+|+||.+||+|.+||||||||+|||||+++||+|||||
T Consensus 411 d~~LF~~TI~~NI~~g~~~at~eei~~a~k~a~~~d~I~~lp~g~dt~vge~G~~LSgGQrQrlaiARall~~~~ILILD 490 (567)
T COG1132 411 DPLLFSGTIRENIALGRPDATDEEIEEALKLANAHEFIANLPDGYDTIVGERGVNLSGGQRQRLAIARALLRNPPILILD 490 (567)
T ss_pred cceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCcccccceecCCCccCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhccCEEEEEeCcEEEEecChhhhhccchHHHHHHhhcc
Q 048639 421 EATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVNADMIAVVEDGQVTETGTHHSLLQTSDFYNRLFTMQN 495 (1139)
Q Consensus 421 Epts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~ 495 (1139)
||||+||+++++.+++.+.++.++||+|+|+||++++++||+|+||++|+|++.|+|+||+++++.|++++..+.
T Consensus 491 EaTSalD~~tE~~I~~~l~~l~~~rT~iiIaHRlsti~~aD~IiVl~~G~i~e~G~h~eLl~~~g~y~~l~~~~~ 565 (567)
T COG1132 491 EATSALDTETEALIQDALKKLLKGRTTLIIAHRLSTIKNADRIIVLDNGRIVERGTHEELLAKGGLYARLYQAQG 565 (567)
T ss_pred ccccccCHHhHHHHHHHHHHHhcCCEEEEEeccHhHHHhCCEEEEEECCEEEEecCHHHHHHcCCHHHHHHHHhh
Confidence 999999999999999999988888999999999999999999999999999999999999999999999998654
No 37
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=3.7e-77 Score=731.40 Aligned_cols=559 Identities=26% Similarity=0.368 Sum_probs=470.7
Q ss_pred hchhhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 558 LNERELLRLVVGTVAAAFSGISKPLFGFFIITIGVAYYDPQAKQEVGWYSLAFSLVGLFSLFTHTLQHYFFGVVGEKAMT 637 (1139)
Q Consensus 558 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (1139)
+.++.++.+++.++++++..++....++++..+++....... ...+.+.++++.++..+..++..++......+...
T Consensus 13 ~l~~~k~~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (585)
T TIGR01192 13 YLNVHKNRVLLIVIANITLAAITIAEPILFGRIIDAISSKSD---VLPTLALWAGFGVFNTIAYVLVAREADRLAHGRRA 89 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555555666666666666666677777776665443211 11122222233334444444445555555666666
Q ss_pred HHHHHHHHHHHcCCCcccccCCCChhHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Q 048639 638 NLRRTLYTGVLRNEIAWFEKPQNDAGSLTSRIVSDTSMVKAIISDRMSVIVQCISSILIATIVSLVVDWRMALVAWAVMP 717 (1139)
Q Consensus 638 ~l~~~l~~~ll~~~~~ff~~~~~~~G~i~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~~~~~p 717 (1139)
++|.++|++++++|++||+ ++++|++++|+++|++.+...+...+..++..++.+++.+++++.++|.+++++++++|
T Consensus 90 ~lr~~~~~~l~~l~~~~~~--~~~~g~~~s~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~ 167 (585)
T TIGR01192 90 TLLTEAFGRIISMPLSWHQ--QRGTSNALHTLLRATETLFGLWLEFMRQHLATFVALFLLIPTAFAMDWRLSIVLMVLGI 167 (585)
T ss_pred HHHHHHHHHHHcCCHHHhC--CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7778999999999999999 67799999999999999999998888888888888888888889999999999999999
Q ss_pred HHHHHHHHHHHhhhchhhhHHHHHHHHHHHHHHhhcchHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 718 CHFIGGLIQAKSAQGFSGDSAAAHTEFISLTSESASNIRTVASFCHEENILQKAKISLEKTKRSSRKESIKYGVIQGFSL 797 (1139)
Q Consensus 718 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (1139)
+++++..+..+..+...++......+..+++.|+++|+++||+|+.++.+.+++.+..++..+...+.....+....+..
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (585)
T TIGR01192 168 LYILIAKLVMQRTKNGQAAVEHHYHNVFKHVSDSISNVSVVHSYNRIEAETSALKQFTNNLLSAQYPVLDWWALASGLNR 247 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888877777776666666777788899999999999999999999999999999888887777666666666666666
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCC
Q 048639 798 CLWNIAHAVALWYTAVLIDKKQATFRDGIRAYQIFSLTVPSITELWTLIPTVISAITVLAPAFEILDRKTEIEPDAPESS 877 (1139)
Q Consensus 798 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~~ 877 (1139)
.+..+..++++++|++++..|.+++|.++++..+......++..+...+..+..+..+.+|+.+..+.+++...... ..
T Consensus 248 ~~~~~~~~~v~~~g~~~v~~g~it~g~l~a~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~-~~ 326 (585)
T TIGR01192 248 MASTISMMCILVIGTVLVIKGELSVGEVIAFIGFANLLIGRLDQMSGFITQIFEARAKLEDFFDLEDSVFQREEPAD-AP 326 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCcc-CC
Confidence 66677778889999999999999999999988888888899999999999999999999999999876543321111 11
Q ss_pred CCCCccccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCCh
Q 048639 878 ESGRIKGRIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNL 957 (1139)
Q Consensus 878 ~~~~~~g~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l 957 (1139)
..+...+.|+++||+|+|+++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||+|+++++.
T Consensus 327 ~~~~~~~~i~~~~v~~~y~~~--~~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~~~~~~~ 404 (585)
T TIGR01192 327 ELPNVKGAVEFRHITFEFANS--SQGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDPTVGQILIDGIDINTVTR 404 (585)
T ss_pred CCCCCCCeEEEEEEEEECCCC--CccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCCCCCEEEECCEEhhhCCH
Confidence 111234679999999999742 368999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhceEEccccccccccHHHHhccCCCcCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHH
Q 048639 958 RRLRSQIGLVQQEPLLFSCSIRNNICYGNEAASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIAR 1037 (1139)
Q Consensus 958 ~~lR~~i~~V~Qdp~LF~gTIreNL~~~~~~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalAR 1037 (1139)
+.+|++++||||||.+|++||+|||.++.+++++++++++++.+++++++.++|+|+||.+|++|.+|||||||||+|||
T Consensus 405 ~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~a~~~~~~~~~i~~l~~g~~t~~~~~~~~LSgGq~qrl~lAR 484 (585)
T TIGR01192 405 ESLRKSIATVFQDAGLFNRSIRENIRLGREGATDEEVYEAAKAAAAHDFILKRSNGYDTLVGERGNRLSGGERQRLAIAR 484 (585)
T ss_pred HHHHhheEEEccCCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhccccccchhcCCCCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999998888999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhcCCEEEEEeCCEEEEecChh
Q 048639 1038 TLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVINSDVIVVMDKGEVVEMGSHS 1117 (1139)
Q Consensus 1038 ALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~~DrI~vl~~G~ive~G~~~ 1117 (1139)
||+++|+|||||||||+||+++++.+++.|++.. .+ .|+|+||||++++..||+|++|++|+++|.|+|+
T Consensus 485 all~~p~ililDEpts~LD~~~~~~i~~~l~~~~---------~~-~tvI~isH~~~~~~~~d~i~~l~~G~i~~~g~~~ 554 (585)
T TIGR01192 485 AILKNAPILVLDEATSALDVETEARVKNAIDALR---------KN-RTTFIIAHRLSTVRNADLVLFLDQGRLIEKGSFQ 554 (585)
T ss_pred HHhcCCCEEEEECCccCCCHHHHHHHHHHHHHHh---------CC-CEEEEEEcChHHHHcCCEEEEEECCEEEEECCHH
Confidence 9999999999999999999999999999998764 33 4599999999999999999999999999999999
Q ss_pred HHhhccCChHHHHHHHHh
Q 048639 1118 TLVAESQGVYSRLYQLQA 1135 (1139)
Q Consensus 1118 eLl~~~~g~f~~l~~~~~ 1135 (1139)
+|+++ +|.|+++++.+.
T Consensus 555 ~l~~~-~~~y~~l~~~~~ 571 (585)
T TIGR01192 555 ELIQK-DGRFYKLLRRSG 571 (585)
T ss_pred HHHHC-CChHHHHHHhCc
Confidence 99986 899999998764
No 38
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=8.8e-78 Score=752.14 Aligned_cols=479 Identities=33% Similarity=0.550 Sum_probs=435.0
Q ss_pred HHHHHHHHHHHHH---------HcCCcccccccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhH
Q 048639 8 LSWHPKGNRVLMK---------IGGEVGAFDTDLSTGKVITGVSSHMSVIRDAIGEKLGHFLSSFATFFSGVLIAVICCW 78 (1139)
Q Consensus 8 ~~~~~~~~~~~~~---------l~~~~~~f~~~~~~G~l~~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 78 (1139)
+++.+.++++..+ +++|.++|+++ ++|++++|+++|++.+++.+...+..++..+..+++.++++++++|
T Consensus 223 ~~~~~~~~~~~~~lr~~l~~~ll~~~~~~f~~~-~~G~i~srl~~Di~~i~~~~~~~~~~~l~~~~~~i~~~~~l~~~s~ 301 (711)
T TIGR00958 223 GSFNYTMARINLRIREDLFRSLLRQDLGFFDEN-KTGELTSRLSSDTQTMSRSLSLNVNVLLRNLVMLLGLLGFMLWLSP 301 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCHHHHcCC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 3445555555555 88999999987 8999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Q 048639 79 EVSLLIFLVVPMILVIGATYTKRMNAVSATKLLYLSEATSMIEQTISQIKTVFAFVGERSEIKSFSDCMDKQIIISRGEA 158 (1139)
Q Consensus 79 ~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~ 158 (1139)
.++++.++.+|+++++..++.++.++..++.++..++.++.+.|.++|+++||+|++|+.+.++|.+..++..+...+..
T Consensus 302 ~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~ 381 (711)
T TIGR00958 302 RLTMVTLINLPLVFLAEKVFGKRYQLLSEELQEAVAKANQVAEEALSGMRTVRSFAAEEGEASRFKEALEETLQLNKRKA 381 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999888887777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Q 048639 159 LIKGVGLGMFQSVTFCCWALIIWVGAVVVTAKRSTGGEVLAAVMSILFGAIALTYAAPDMQVFNQAKAAGFEIFQVIQRK 238 (1139)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~l~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ri~~~l~~~ 238 (1139)
...+.......++..+..++++++|++++.+|.+|+|.+++++.+......|+..+...+..++++..+.+|+.++++.+
T Consensus 382 ~~~~~~~~~~~~~~~~~~~~il~~g~~lv~~g~it~G~lva~~~~~~~l~~~l~~l~~~~~~~~~~~~a~~ri~~~l~~~ 461 (711)
T TIGR00958 382 LAYAGYLWTTSVLGMLIQVLVLYYGGQLVLTGKVSSGNLVSFLLYQEQLGEAVRVLSYVYSGMMQAVGASEKVFEYLDRK 461 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 66666666666666667777888999999999999999999999999999999999999999999999999999999876
Q ss_pred CCCccCCCCccccCCCccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEE
Q 048639 239 PRISYSSKGKELEKIDGNIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILI 318 (1139)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~ 318 (1139)
++..... ...+.+..+.|+++||+|+||+++++++|+|+||+|+|||+++||||||||||||+++|+|+|+|++|+|.+
T Consensus 462 ~~~~~~~-~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I~i 540 (711)
T TIGR00958 462 PNIPLTG-TLAPLNLEGLIEFQDVSFSYPNRPDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPTGGQVLL 540 (711)
T ss_pred CCCCCCC-CCCCCCCCCeEEEEEEEEECCCCCCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEE
Confidence 5432111 111223346799999999998655568999999999999999999999999999999999999999999999
Q ss_pred CCccCCCCCHHHHhcceEEEecCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCCh
Q 048639 319 DSLNIKDLDLKSLRKNIGAVSQEPSLFTGSLMDNIKVGNMDADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSG 398 (1139)
Q Consensus 319 ~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSg 398 (1139)
||+|+++++.+++|++|+||+|+|++|++||+|||.+|.++.++++++++++.++++++++++|+|+||.+||+|.+|||
T Consensus 541 dg~~i~~~~~~~lr~~i~~v~Q~~~lF~gTIreNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSG 620 (711)
T TIGR00958 541 DGVPLVQYDHHYLHRQVALVGQEPVLFSGSVRENIAYGLTDTPDEEIMAAAKAANAHDFIMEFPNGYDTEVGEKGSQLSG 620 (711)
T ss_pred CCEEHHhcCHHHHHhhceEEecCccccccCHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCCCccCCcccCCCCcCCH
Confidence 99999999999999999999999999999999999999988899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhccCEEEEEeCcEEEEecChh
Q 048639 399 GQKQRIAIARAIVKNPPILLLDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVNADMIAVVEDGQVTETGTHH 478 (1139)
Q Consensus 399 GqkqRi~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~ 478 (1139)
||||||+||||++++|+|+|||||||+||+++++.+.+ ....+++|+|+||||++++..||+|++|++|+|+++|+|+
T Consensus 621 GQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~--~~~~~~~TvIiItHrl~~i~~aD~IivL~~G~ive~Gt~~ 698 (711)
T TIGR00958 621 GQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQE--SRSRASRTVLLIAHRLSTVERADQILVLKKGSVVEMGTHK 698 (711)
T ss_pred HHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH--hhccCCCeEEEEeccHHHHHhCCEEEEEECCEEEEeeCHH
Confidence 99999999999999999999999999999999999998 3334689999999999999999999999999999999999
Q ss_pred hhhccchHHHHH
Q 048639 479 SLLQTSDFYNRL 490 (1139)
Q Consensus 479 ~l~~~~~~~~~~ 490 (1139)
||+++++.|+++
T Consensus 699 eL~~~~~~y~~l 710 (711)
T TIGR00958 699 QLMEDQGCYKHL 710 (711)
T ss_pred HHHhCCCchHhc
Confidence 999988888765
No 39
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.7e-77 Score=679.66 Aligned_cols=471 Identities=24% Similarity=0.354 Sum_probs=431.6
Q ss_pred HcCCcccccccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 21 IGGEVGAFDTDLSTGKVITGVSSHMSVIRDAIGEKLGHFLSSFATFFSGVLIAVICCWEVSLLIFLVVPMILVIGATYTK 100 (1139)
Q Consensus 21 l~~~~~~f~~~~~~G~l~~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~l~~l~~~~~~~~~~~~~~~ 100 (1139)
.+.++.+-.+. ++|+..+.++..++.++.++...++.+....+.++..++.+++++|..++++++++|++.+++..+++
T Consensus 84 ~~~gp~~~~~~-~~g~~atl~~egve~l~~Y~~ryLPq~~~~~ivp~~i~i~v~~~~w~aalIllit~PlIPlfMilvg~ 162 (559)
T COG4988 84 AKLGPAFIAQK-PAGSAATLALEGIEQLEPYYARYLPQMFLSAIVPLLILIAIFFFNWAAALILLITAPLIPLFMILVGL 162 (559)
T ss_pred HhCChhhhcCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44556666665 89999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 101 RMNAVSATKLLYLSEATSMIEQTISQIKTVFAFVGERSEIKSFSDCMDKQIIISRGEALIKGVGLGMFQSVTFCCWALII 180 (1139)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (1139)
+.++..++++....++.+++.|.++|+.|+|+|+..+...+++.+..++.++..++..++.-++..++.+++++..+++.
T Consensus 163 ~a~~~s~~~~~~~~~ls~~FLD~LrGL~TLr~f~~~~~~~~~i~~~se~fR~~TM~vLriAflSs~vLeffa~lsiAlvA 242 (559)
T COG4988 163 AAKDASEKQFSALARLSGHFLDRLRGLETLRAFGRTEATEERIRKDSEDFRKATMSVLRIAFLSSAVLEFFAYLSIALVA 242 (559)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998888876
Q ss_pred HHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccCCCC-ccccCCCccEE
Q 048639 181 WVGAVVVTA-KRSTGGEVLAAVMSILFGAIALTYAAPDMQVFNQAKAAGFEIFQVIQRKPRISYSSKG-KELEKIDGNID 258 (1139)
Q Consensus 181 ~~g~~~v~~-~~l~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~-~~~~~~~~~i~ 258 (1139)
.+.+..... |.++....+.++...--...|+..+...++.-..+.++.+.++.+++.+++....... ......+..++
T Consensus 243 v~~g~~ll~~G~ltl~~~l~~LiLAPEff~PlR~lGs~fH~~~~g~aa~d~i~~~l~~~~~~~~~~~~~~~~~~~~~ei~ 322 (559)
T COG4988 243 VYIGFRLLGEGDLTLFAGLFVLILAPEFFQPLRDLGSFFHAAAAGEAAADKLFTLLESPVATPGSGEKAEVANEPPIEIS 322 (559)
T ss_pred HHHHHHHHccCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCCCccccccccCCCceee
Confidence 665555666 7898887777766666677899999999999999999999999999876654222111 11111122455
Q ss_pred EEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcceEEE
Q 048639 259 IRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNIGAV 338 (1139)
Q Consensus 259 ~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v 338 (1139)
.+|++|.|++. +++++|+||++++|+++||||+||||||||+++|+|+++|++|+|.+||+++++++.+.||++++||
T Consensus 323 ~~~l~~~y~~g--~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~~G~I~vng~~l~~l~~~~~~k~i~~v 400 (559)
T COG4988 323 LENLSFRYPDG--KPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPTQGEIRVNGIDLRDLSPEAWRKQISWV 400 (559)
T ss_pred ecceEEecCCC--CcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCccccccCHHHHHhHeeee
Confidence 56999999864 3799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHccCCCEEE
Q 048639 339 SQEPSLFTGSLMDNIKVGNMDADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVKNPPILL 418 (1139)
Q Consensus 339 ~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~~~~ill 418 (1139)
+|+|+||++|+||||.+++++.++++++++++.+++.+++.. |+|+||.+||+|.+|||||+||++|||||+++++++|
T Consensus 401 ~Q~p~lf~gTireNi~l~~~~~s~e~i~~al~~a~l~~~v~~-p~GLdt~ige~G~~LSgGQ~QRlaLARAll~~~~l~l 479 (559)
T COG4988 401 SQNPYLFAGTIRENILLARPDASDEEIIAALDQAGLLEFVPK-PDGLDTVIGEGGAGLSGGQAQRLALARALLSPASLLL 479 (559)
T ss_pred CCCCccccccHHHHhhccCCcCCHHHHHHHHHHhcHHHhhcC-CCcccchhccCCCCCCHHHHHHHHHHHHhcCCCCEEE
Confidence 999999999999999999999999999999999999999999 9999999999999999999999999999999999999
Q ss_pred EeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhccCEEEEEeCcEEEEecChhhhhccchHHHHHHhhcc
Q 048639 419 LDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVNADMIAVVEDGQVTETGTHHSLLQTSDFYNRLFTMQN 495 (1139)
Q Consensus 419 lDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~ 495 (1139)
||||||+||.+||+.|.+.|.++.+++|+|+||||++.+.+||+|++||+|+++++|+|+++.++++.|++++..|.
T Consensus 480 lDEpTA~LD~etE~~i~~~l~~l~~~ktvl~itHrl~~~~~~D~I~vld~G~l~~~g~~~~L~~~~~~y~~l~~~q~ 556 (559)
T COG4988 480 LDEPTAHLDAETEQIILQALQELAKQKTVLVITHRLEDAADADRIVVLDNGRLVEQGTHEELSEKQGLYANLLKQQE 556 (559)
T ss_pred ecCCccCCCHhHHHHHHHHHHHHHhCCeEEEEEcChHHHhcCCEEEEecCCceeccCCHHHHhhcCcHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998664
No 40
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=6.4e-79 Score=657.01 Aligned_cols=492 Identities=33% Similarity=0.493 Sum_probs=433.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccCCCChhHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH
Q 048639 625 HYFFGVVGEKAMTNLRRTLYTGVLRNEIAWFEKPQNDAGSLTSRIVSDTSMVKAIISDRMSVIVQCISSILIATIV-SLV 703 (1139)
Q Consensus 625 ~~~~~~~~~~~~~~l~~~l~~~ll~~~~~ff~~~~~~~G~i~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~-~~~ 703 (1139)
..+|...++.+...+--+.|.|+.++++.|+- ...+|.+..-+.+..+-++..+...+...++.++-+....++ ...
T Consensus 3 ~~~fs~v~q~a~r~la~~~F~h~~~Lsl~fHl--~r~TGglsR~ierGtkgI~~i~~~~l~~i~P~~~Ei~l~~vi~~~~ 80 (497)
T COG5265 3 DRLFSPVGQIAVRVLAYVTFFHLHSLSLRFHL--ERRTGGLSRAIERGTKGIETILRWILFNILPTLVEISLVAVILWRV 80 (497)
T ss_pred hHhhhHHHHHHHHHHHHHHHHHHHhcchhhhh--hcccCceeeHhhcCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHhh
Confidence 34566777888888999999999999999998 455777777777777777777777777777777766555444 456
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHHHHHHhhcchHHHHhhcchHHHHHHHHHHHHHHHHHHH
Q 048639 704 VDWRMALVAWAVMPCHFIGGLIQAKSAQGFSGDSAAAHTEFISLTSESASNIRTVASFCHEENILQKAKISLEKTKRSSR 783 (1139)
Q Consensus 704 ~~~~l~lv~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~ 783 (1139)
++|+.+++.++++.++.++.....-......|+..++++.......+++-+.+|+|.|+.|+.+..+|...++.+.++..
T Consensus 81 ~~~~f~~~t~vtv~lY~~ftv~~s~wr~~~rr~~n~aDs~a~~~aidsLlnfEtvk~F~ne~~e~~r~~~~~~~Y~~a~~ 160 (497)
T COG5265 81 YGWWFALTTLVTVILYLLFTVIVSDWRTDFRRLMNNADSDANAKAIDSLLNFETVKYFGNEEYEAVRYDHALETYEKAAI 160 (497)
T ss_pred cccHHHHHHHHHHHHHHHhheeehhhhHHHHHhhhhhhhHHHHHHHHHHhhhhheeecCchhhhhhhcCchHHHHHHHHH
Confidence 79999999999998888887776666666677888889999999999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 048639 784 KESIKYGVIQGFSLCLWNIAHAVALWYTAVLIDKKQATFRDGIRAYQIFSLTVPSITELWTLIPTVISAITVLAPAFEIL 863 (1139)
Q Consensus 784 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~ 863 (1139)
+.....++.......++.....+....+...+..|.+|+|+....-.++.....|+..+.....++.++...+++.++.+
T Consensus 161 k~~~Sl~~Ln~gQ~~I~~~~l~~~m~~s~~~v~~g~~TvgD~V~~Nall~qls~Plnflg~~Yrei~q~ltdme~mfdLl 240 (497)
T COG5265 161 KVHVSLLVLNFGQTAIFSTGLRVMMTMSALGVEEGQLTVGDLVNVNALLFQLSIPLNFLGFSYREIRQALTDMEKMFDLL 240 (497)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHhhcHHHHhhccCCchhHHhHHHHHhhhhhhhhhhHHHHHHHHHhhhhHHHHHHhh
Confidence 77666655555555556666666677777788899999999998888888888888888888899999999999999999
Q ss_pred ccCCCCCCCCCCCCCCC-CccccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCc
Q 048639 864 DRKTEIEPDAPESSESG-RIKGRIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNE 942 (1139)
Q Consensus 864 ~~~~~~~~~~~~~~~~~-~~~g~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~ 942 (1139)
+.+.+..... ..++.+ ...|.|.|+||+|.|. |..|+|+|+||++++|+++||||+||+||||+.++|+|||++++
T Consensus 241 ~~~~~v~d~p-da~~L~~~~~g~v~F~~V~F~y~--~~r~iL~~isf~i~~g~tvAiVg~SG~gKsTI~rllfRFyD~~s 317 (497)
T COG5265 241 DVEAEVSDAP-DAPPLWPVRLGAVAFINVSFAYD--PRRPILNGISFTIPLGKTVAIVGESGAGKSTILRLLFRFYDVNS 317 (497)
T ss_pred ccchhhccCC-CCccccccccceEEEEEEEeecc--ccchhhcCccccccCccEEEEEeCCCCcHHHHHHHHHHHhCCcC
Confidence 8776654322 222222 4568899999999995 56789999999999999999999999999999999999999999
Q ss_pred cEEEECCcccCCCChHHHhhhceEEccccccccccHHHHhccCCCcCCHHHHHHHHHHcCchHHHhhCCCCccccccCCC
Q 048639 943 GIILIDGKGIKEYNLRRLRSQIGLVQQEPLLFSCSIRNNICYGNEAASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKG 1022 (1139)
Q Consensus 943 G~I~idG~di~~~~l~~lR~~i~~V~Qdp~LF~gTIreNL~~~~~~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G 1022 (1139)
|.|.|||+|++++..+.+|+-||+||||.+||+.||..|+.+|.|+++++|++.|++.+++++||+++|+||||.|||.|
T Consensus 318 G~I~id~qdir~vtq~slR~aIg~VPQDtvLFNDti~yni~ygr~~at~eev~aaa~~aqi~~fi~~lP~gy~t~Vgerg 397 (497)
T COG5265 318 GSITIDGQDIRDVTQQSLRRAIGIVPQDTVLFNDTIAYNIKYGRPDATAEEVGAAAEAAQIHDFIQSLPEGYDTGVGERG 397 (497)
T ss_pred ceEEEcchhHHHhHHHHHHHHhCcCcccceehhhhHHHHHhccCccccHHHHHHHHHHhhhhHHHHhCchhhhcccchhe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhcCCEE
Q 048639 1023 CQLSGGQKQRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVINSDVI 1102 (1139)
Q Consensus 1023 ~~LSgGQrQrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~~DrI 1102 (1139)
-.||||||||+||||++|++|+||+||||||+||..||+.||.+|++.. .++| .++|||||+||.++|.|
T Consensus 398 lklSggekqrvaiar~ilk~p~il~~deatsaldt~te~~iq~~l~~~~---------~~rt-tlviahrlsti~~adei 467 (497)
T COG5265 398 LKLSGGEKQRVAIARTILKNPPILILDEATSALDTHTEQAIQAALREVS---------AGRT-TLVIAHRLSTIIDADEI 467 (497)
T ss_pred eeccCchHHHHHHHHHHhcCCCEEEEehhhhHhhhhHHHHHHHHHHHHh---------CCCe-EEEEeehhhhccCCceE
Confidence 9999999999999999999999999999999999999999999999876 4555 89999999999999999
Q ss_pred EEEeCCEEEEecChhHHhhccCChHHHHHH
Q 048639 1103 VVMDKGEVVEMGSHSTLVAESQGVYSRLYQ 1132 (1139)
Q Consensus 1103 ~vl~~G~ive~G~~~eLl~~~~g~f~~l~~ 1132 (1139)
+||++|+|+|.|+|+||+++ +|.|++||.
T Consensus 468 ivl~~g~i~erg~h~~ll~~-~g~ya~mw~ 496 (497)
T COG5265 468 IVLDNGRIVERGTHEELLAA-GGLYAEMWR 496 (497)
T ss_pred EEeeCCEEEecCcHHHHHHc-CChHHHHhc
Confidence 99999999999999999987 999999995
No 41
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=7e-77 Score=745.48 Aligned_cols=466 Identities=26% Similarity=0.347 Sum_probs=431.0
Q ss_pred HcCCcccccccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 21 IGGEVGAFDTDLSTGKVITGVSSHMSVIRDAIGEKLGHFLSSFATFFSGVLIAVICCWEVSLLIFLVVPMILVIGATYTK 100 (1139)
Q Consensus 21 l~~~~~~f~~~~~~G~l~~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~l~~l~~~~~~~~~~~~~~~ 100 (1139)
++.|++||++. ++|++++|++ |++.+++.+...+...+..+..+++.++++++++|.+++++++++|+++++..++.+
T Consensus 220 l~~~~~~~~~~-~~g~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~~~~~~~~~~~~ 297 (686)
T TIGR03797 220 LRLPVSFFRQY-STGDLASRAM-GISQIRRILSGSTLTTLLSGIFALLNLGLMFYYSWKLALVAVALALVAIAVTLVLGL 297 (686)
T ss_pred HcCCHHHHCCC-ChhHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999987 8999999997 899999999888878777777778888899999999999999999998889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 101 RMNAVSATKLLYLSEATSMIEQTISQIKTVFAFVGERSEIKSFSDCMDKQIIISRGEALIKGVGLGMFQSVTFCCWALII 180 (1139)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (1139)
+.++..++.++..++..+.+.|.++|+++||+++.|+.+.++|.+...+..+...+..........+..++..+..++++
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~il 377 (686)
T TIGR03797 298 LQVRKERRLLELSGKISGLTVQLINGISKLRVAGAENRAFARWAKLFSRQRKLELSAQRIENLLTVFNAVLPVLTSAALF 377 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998888888887777777778888889
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccCCCCccccCCCccEEEE
Q 048639 181 WVGAVVVTAKRSTGGEVLAAVMSILFGAIALTYAAPDMQVFNQAKAAGFEIFQVIQRKPRISYSSKGKELEKIDGNIDIR 260 (1139)
Q Consensus 181 ~~g~~~v~~~~l~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~~~~~~~~~~i~~~ 260 (1139)
++|++++.+|.+|+|.++++..+......|+..+...+..++++..+.+|+.++++.+++.... ...+....+.|+++
T Consensus 378 ~~g~~lv~~g~ltiG~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~--~~~~~~~~~~I~~~ 455 (686)
T TIGR03797 378 AAAISLLGGAGLSLGSFLAFNTAFGSFSGAVTQLSNTLISILAVIPLWERAKPILEALPEVDEA--KTDPGKLSGAIEVD 455 (686)
T ss_pred HHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccC--cCCCCCCCceEEEE
Confidence 9999999999999999999999999999999999999999999999999999999865543211 11112234579999
Q ss_pred eEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcceEEEec
Q 048639 261 DVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNIGAVSQ 340 (1139)
Q Consensus 261 ~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q 340 (1139)
||+|+|++. ++++|+|+||+|++||++|||||||||||||+++|+|+|+|++|+|.+||+|+++++.+++|++||||||
T Consensus 456 nvsf~Y~~~-~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~~~~lr~~i~~v~Q 534 (686)
T TIGR03797 456 RVTFRYRPD-GPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPESGSVFYDGQDLAGLDVQAVRRQLGVVLQ 534 (686)
T ss_pred EEEEEcCCC-CccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcCcCCHHHHHhccEEEcc
Confidence 999999743 4679999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHccCCCEEEEe
Q 048639 341 EPSLFTGSLMDNIKVGNMDADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVKNPPILLLD 420 (1139)
Q Consensus 341 ~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~~~~illlD 420 (1139)
+|++|++||+|||.+++| .++++++++++.++++++++++|+|+||.+||+|.+|||||||||+||||++++|+|||||
T Consensus 535 ~~~lf~gTI~eNi~~~~~-~~~e~i~~al~~a~l~~~i~~lp~G~dt~ige~G~~LSGGQrQRialARAll~~p~iLiLD 613 (686)
T TIGR03797 535 NGRLMSGSIFENIAGGAP-LTLDEAWEAARMAGLAEDIRAMPMGMHTVISEGGGTLSGGQRQRLLIARALVRKPRILLFD 613 (686)
T ss_pred CCccCcccHHHHHhcCCC-CCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 999999999999999998 8999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhccCEEEEEeCcEEEEecChhhhhccchHHHHHHhhc
Q 048639 421 EATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVNADMIAVVEDGQVTETGTHHSLLQTSDFYNRLFTMQ 494 (1139)
Q Consensus 421 Epts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~ 494 (1139)
||||+||+++++.+.+.++++ ++|+|+||||++.++.||+|++|++|+|+++|+|+|++++++.|++++..|
T Consensus 614 EpTS~LD~~te~~i~~~L~~~--~~T~IiItHr~~~i~~~D~Iivl~~G~iv~~G~~~~Ll~~~~~y~~l~~~q 685 (686)
T TIGR03797 614 EATSALDNRTQAIVSESLERL--KVTRIVIAHRLSTIRNADRIYVLDAGRVVQQGTYDELMAREGLFAQLARRQ 685 (686)
T ss_pred CCccCCCHHHHHHHHHHHHHh--CCeEEEEecChHHHHcCCEEEEEECCEEEEECCHHHHHhCCcHHHHHHHhc
Confidence 999999999999999999876 689999999999999999999999999999999999999999999988643
No 42
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=2.1e-78 Score=693.16 Aligned_cols=482 Identities=28% Similarity=0.467 Sum_probs=373.8
Q ss_pred cEEEEeEEEECCCCCC-CccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCC----ccEEEECCccCCCCCHHH
Q 048639 256 NIDIRDVCFAYPSRPD-QLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPS----NGDILIDSLNIKDLDLKS 330 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~-~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~----~G~i~~~g~~~~~~~~~~ 330 (1139)
-++++|++..|..... .++++||||++.+||++||||+|||||||+++.|.|+.++. +|+|.++|.|+..++.+.
T Consensus 5 lL~V~nL~v~~~~~~~~~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~ 84 (539)
T COG1123 5 LLEVENLTVEFATDGGRVPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSERE 84 (539)
T ss_pred eEEEeceEEEEecCCcceeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHHH
Confidence 5899999999975422 25999999999999999999999999999999999999987 899999999998887765
Q ss_pred Hh----cceEEEecCCC-CCcc--cHHHHHh----cCCCCCCHHHHHHHHHHhcHHHHHHh--CCCCCCccccccCCCCC
Q 048639 331 LR----KNIGAVSQEPS-LFTG--SLMDNIK----VGNMDADDEQIYNASMMANAHSFISQ--LPDQYSTELGQRGVQLS 397 (1139)
Q Consensus 331 ~~----~~i~~v~Q~~~-l~~~--ti~~ni~----~g~~~~~~~~~~~~~~~~~~~~~i~~--l~~g~~t~i~~~g~~LS 397 (1139)
+| +.|+|+||+|. .+|. ||.+-|. .... .+.++ ....+.+.++. +|+.... ...+..||
T Consensus 85 ~r~~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E~~~~h~~-~~~~e-----a~~~a~elL~~Vgl~~~~~~--~~yPheLS 156 (539)
T COG1123 85 MRKLRGKRIAMIFQDPMTSLNPVMTIGDQIREALRLHGK-GSRAE-----ARKRAVELLEQVGLPDPERR--DRYPHQLS 156 (539)
T ss_pred HHHhccccEEEEecCchhhcCchhhHHHHHHHHHHHhcc-ccHHH-----HHHHHHHHHHHcCCCChhhh--ccCCcccC
Confidence 43 57999999985 4442 5555443 2211 11111 11222334443 4443222 56899999
Q ss_pred hHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCCeEEEEecCccchhc-cCEEEEEeCcEEEEe
Q 048639 398 GGQKQRIAIARAIVKNPPILLLDEATSALDSESEKLVQEALERAM--QGRTVILIAHRMSTIVN-ADMIAVVEDGQVTET 474 (1139)
Q Consensus 398 gGqkqRi~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~ 474 (1139)
||||||+.||+||+.+|++||+||||++||+.++.+|.+.|+++. .|.++|+|||++..+.+ ||||+||.+|+++|.
T Consensus 157 GG~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e~g~a~l~ITHDl~Vva~~aDrv~Vm~~G~iVE~ 236 (539)
T COG1123 157 GGMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRELGMAVLFITHDLGVVAELADRVVVMYKGEIVET 236 (539)
T ss_pred chHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHHcCcEEEEEcCCHHHHHHhcCeEEEEECCEEEEe
Confidence 999999999999999999999999999999999999999999876 48999999999999987 999999999999999
Q ss_pred cChhhhhccch-HH-HHHHhhccCCCCCCcCcccccccccccchhhhhhhcccCchhhhhhcccccchhhhcccccchhh
Q 048639 475 GTHHSLLQTSD-FY-NRLFTMQNLRPIDDSRTKASTVESTSTEQQISVVEQLEEPEESKRELSASTGQEEVKGKRTTIFF 552 (1139)
Q Consensus 475 g~~~~l~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 552 (1139)
|+.++++++.. .| +.++..
T Consensus 237 G~~~~i~~~p~hpYT~~Ll~a----------------------------------------------------------- 257 (539)
T COG1123 237 GPTEEILSNPQHPYTRGLLAA----------------------------------------------------------- 257 (539)
T ss_pred cCHHHHHhccCCcccHHHHhh-----------------------------------------------------------
Confidence 99999875310 00 000000
Q ss_pred HHHHhhchhhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 553 RIWFCLNERELLRLVVGTVAAAFSGISKPLFGFFIITIGVAYYDPQAKQEVGWYSLAFSLVGLFSLFTHTLQHYFFGVVG 632 (1139)
Q Consensus 553 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 632 (1139)
T Consensus 258 -------------------------------------------------------------------------------- 257 (539)
T COG1123 258 -------------------------------------------------------------------------------- 257 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHcCCCcccccCCCChhHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Q 048639 633 EKAMTNLRRTLYTGVLRNEIAWFEKPQNDAGSLTSRIVSDTSMVKAIISDRMSVIVQCISSILIATIVSLVVDWRMALVA 712 (1139)
Q Consensus 633 ~~~~~~l~~~l~~~ll~~~~~ff~~~~~~~G~i~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~ 712 (1139)
.| ..+....
T Consensus 258 -----------------~p--~~~~~~~---------------------------------------------------- 266 (539)
T COG1123 258 -----------------VP--RLGDEKI---------------------------------------------------- 266 (539)
T ss_pred -----------------CC--Ccccccc----------------------------------------------------
Confidence 00 0000000
Q ss_pred HHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHHHHHHhhcchHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 713 WAVMPCHFIGGLIQAKSAQGFSGDSAAAHTEFISLTSESASNIRTVASFCHEENILQKAKISLEKTKRSSRKESIKYGVI 792 (1139)
Q Consensus 713 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 792 (1139)
T Consensus 267 -------------------------------------------------------------------------------- 266 (539)
T COG1123 267 -------------------------------------------------------------------------------- 266 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCC
Q 048639 793 QGFSLCLWNIAHAVALWYTAVLIDKKQATFRDGIRAYQIFSLTVPSITELWTLIPTVISAITVLAPAFEILDRKTEIEPD 872 (1139)
Q Consensus 793 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~ 872 (1139)
....... +
T Consensus 267 ----------------------------------------------------------------------~~~~~~~-~- 274 (539)
T COG1123 267 ----------------------------------------------------------------------IRLPRRG-P- 274 (539)
T ss_pred ----------------------------------------------------------------------ccccccc-c-
Confidence 0000000 0
Q ss_pred CCCCCCCCCccccEEEEeEEEECCCC--------CCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccE
Q 048639 873 APESSESGRIKGRIEFQNIKFNYPSR--------PEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGI 944 (1139)
Q Consensus 873 ~~~~~~~~~~~g~I~~~nvsf~Y~~~--------~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~ 944 (1139)
.....-++++|++.+|..+ ....+++||||+|++||++||||+||||||||.++|+|+++|++|+
T Consensus 275 -------~~~~~ll~V~~l~k~y~~~~~~~~~~~~~~~Av~~VSf~l~~GE~lglVGeSGsGKSTlar~i~gL~~P~~G~ 347 (539)
T COG1123 275 -------LRAEPLLSVRNLSKRYGSRKGLFVRERGEVKAVDDVSFDLREGETLGLVGESGSGKSTLARILAGLLPPSSGS 347 (539)
T ss_pred -------cccCceeEeeeeeeeeccccccccccccceeeeeeeeeEecCCCEEEEECCCCCCHHHHHHHHhCCCCCCCce
Confidence 0011248899999999742 1246899999999999999999999999999999999999999999
Q ss_pred EEECCcc--cCCCChHHHhhhceEEccccccc---cccHHHHhccCC----C---cCCHHHHHHHHHHcCchH-HHhhCC
Q 048639 945 ILIDGKG--IKEYNLRRLRSQIGLVQQEPLLF---SCSIRNNICYGN----E---AASEAEIVEVSKKANIHD-FISSLP 1011 (1139)
Q Consensus 945 I~idG~d--i~~~~l~~lR~~i~~V~Qdp~LF---~gTIreNL~~~~----~---~~sd~ei~~al~~~~l~~-~i~~lp 1011 (1139)
|.++|.| .+.-+...+|+++-+|+|||+-. ..||+++|.-.- + ....+.+.+.++.++|.+ +..+-|
T Consensus 348 i~~~g~~~~~~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~~~~~~~~~~~~~rv~~ll~~VgL~~~~l~ryP 427 (539)
T COG1123 348 IIFDGQDLDLTGGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLRIHGGGSGAERRARVAELLELVGLPPEFLDRYP 427 (539)
T ss_pred EEEeCcccccccchhhhhhhheEEEEeCcccccCccccHHHHHHhHHhhhcccchHHHHHHHHHHHHHcCCCHHHHhcCc
Confidence 9999977 33334556888999999999632 469999886321 1 112245777899999875 444444
Q ss_pred CCccccccCCCCCCChHHHHHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEec
Q 048639 1012 DGYDTVVGEKGCQLSGGQKQRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAH 1091 (1139)
Q Consensus 1012 ~gldt~v~e~G~~LSgGQrQrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaH 1091 (1139)
..||||||||+||||||..+|++||+|||||+||+-+.+.|.+.|+++.. .-+.|.|+|||
T Consensus 428 -----------~elSGGQrQRvaIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~~lq~--------e~g~t~lfISH 488 (539)
T COG1123 428 -----------HELSGGQRQRVAIARALALEPKLLILDEPVSALDVSVQAQVLNLLKDLQE--------ELGLTYLFISH 488 (539)
T ss_pred -----------hhcCcchhHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHHHHH--------HhCCEEEEEeC
Confidence 57999999999999999999999999999999999999999999987751 22356999999
Q ss_pred Cchhhhc-CCEEEEEeCCEEEEecChhHHhhccCChHHHHHHH
Q 048639 1092 RLATVIN-SDVIVVMDKGEVVEMGSHSTLVAESQGVYSRLYQL 1133 (1139)
Q Consensus 1092 rl~ti~~-~DrI~vl~~G~ive~G~~~eLl~~~~g~f~~l~~~ 1133 (1139)
+++.++. ||||+||++|+|||.|+.+++.++++..|.+..-.
T Consensus 489 Dl~vV~~i~drv~vm~~G~iVE~G~~~~v~~~p~h~Ytr~L~~ 531 (539)
T COG1123 489 DLAVVRYIADRVAVMYDGRIVEEGPTEKVFENPQHPYTRKLLA 531 (539)
T ss_pred CHHHHHhhCceEEEEECCeEEEeCCHHHHhcCCCChHHHHHHH
Confidence 9999998 99999999999999999999999988889876543
No 43
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=100.00 E-value=8.3e-76 Score=715.90 Aligned_cols=523 Identities=25% Similarity=0.334 Sum_probs=446.2
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 567 VVGTVAAAFSGISKPLFGFFIITIGVAYY-DPQAKQEVGWYSLAFSLVGLFSLFTHTLQHYFFGVVGEKAMTNLRRTLYT 645 (1139)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 645 (1139)
.++++++++.++..+..+++..+.++... ..........+..+++++.++..++.+++.++....+.+...++|.++|+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~ 85 (529)
T TIGR02857 6 ALLGLLGALGALLIIAQAWLLARVIDGLISAGEPLAELLPALGALALAVLLRALLGWLGERAAARAAAAVKSQLRERLLA 85 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445555555566666666666666543 22122233445566667777788889999999999999999999999999
Q ss_pred HHHcCCCcccccCCCChhHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Q 048639 646 GVLRNEIAWFEKPQNDAGSLTSRIVSDTSMVKAIISDRMSVIVQCISSILIATIVSLVVDWRMALVAWAVMPCHFIGGLI 725 (1139)
Q Consensus 646 ~ll~~~~~ff~~~~~~~G~i~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~~~~~p~~~~~~~~ 725 (1139)
++++.|..||+ +.++|++++|+++|++.+++.+...+..++..++.+++++++++.++|.+++++++.+|+.+++..+
T Consensus 86 ~l~~~~~~~~~--~~~~g~~~~~l~~di~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~l~~~~l~~~~~~~ 163 (529)
T TIGR02857 86 AVAALGPGWLQ--GRPSGELATLALEGVEALDGYFARYLPQLVLAVIIPLAILAAVFPADWISGLILLLTAPLIPIFMIL 163 (529)
T ss_pred HHHhCCchhhc--cCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999 6889999999999999999999998888888888888888889999999999998888888777777
Q ss_pred HHHhhhchhhhHHHHHHHHHHHHHHhhcchHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 726 QAKSAQGFSGDSAAAHTEFISLTSESASNIRTVASFCHEENILQKAKISLEKTKRSSRKESIKYGVIQGFSLCLWNIAHA 805 (1139)
Q Consensus 726 ~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 (1139)
..+..+...++.++...+..+.+.|+++|+++||+|+.++.+.++|.+..++..+...+..........+...+..+...
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (529)
T TIGR02857 164 IGWAAQAAARKQWAALSRLSGHFLDRLRGLPTLKLFGRAKAQAAAIARSSEEYRERTMRVLRIAFLSSAVLELFATLSVA 243 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777666777777788889999999999999999999999999999988888777766666555555555555555555
Q ss_pred HHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCcccc
Q 048639 806 VALWYTAVLIDKKQATFRDGIRAYQIFSLTVPSITELWTLIPTVISAITVLAPAFEILDRKTEIEPDAPESSESGRIKGR 885 (1139)
Q Consensus 806 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~ 885 (1139)
+...++++.+..|.++++.++++..+......++..+...+..+..+..+.+|+.++++.+++..... ..+....+.
T Consensus 244 ~~~~~~~~~~~~g~~t~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ll~~~~~~~~~~---~~~~~~~~~ 320 (529)
T TIGR02857 244 LVAVYIGFRLLAGDLDLATGLFVLLLAPEFYLPLRQLGADYHARADGVAAAEALFAVLDAPRPLAGKA---PVTAAPAPS 320 (529)
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCc---CCCCCCCCe
Confidence 55555666666899999999988888888888999999999999999999999999997543221111 111112357
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhce
Q 048639 886 IEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQIG 965 (1139)
Q Consensus 886 I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~ 965 (1139)
|+|+||+|+||++ +.++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|.+||+|+++++.+++|++++
T Consensus 321 i~~~~v~f~y~~~-~~~il~~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~I~~~g~~i~~~~~~~lr~~i~ 399 (529)
T TIGR02857 321 LEFSGLSVAYPGR-RAPALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTEGSIAVNGVPLADADADSWRDQIA 399 (529)
T ss_pred EEEEEEEEECCCC-CcccccceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEehhhCCHHHHHhheE
Confidence 9999999999854 347999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEccccccccccHHHHhccCCCcCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhcCCCCE
Q 048639 966 LVQQEPLLFSCSIRNNICYGNEAASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIARTLLKRPAI 1045 (1139)
Q Consensus 966 ~V~Qdp~LF~gTIreNL~~~~~~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalARALlr~p~I 1045 (1139)
||||||++|++||||||.++.++++|++++++++.++++++++++|+||||.+||+|.+||||||||++||||++++|+|
T Consensus 400 ~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~Gldt~v~e~g~~LSgGq~qri~laRal~~~~~i 479 (529)
T TIGR02857 400 WVPQHPFLFAGTIAENIRLARPDASDAEIRRALERAGLDEFVAALPQGLDTLIGEGGAGLSGGQAQRLALARAFLRDAPL 479 (529)
T ss_pred EEcCCCcccCcCHHHHHhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhccccccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999999888899999999999999999999999999999999999999999999999999999999
Q ss_pred EEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhcCCEEEEE
Q 048639 1046 MLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVINSDVIVVM 1105 (1139)
Q Consensus 1046 LlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~~DrI~vl 1105 (1139)
||||||||+||++|++.|++.|++.. +++ |+|+||||++++..||+|+||
T Consensus 480 lilDE~ts~lD~~~~~~i~~~l~~~~---------~~~-t~i~itH~~~~~~~~d~i~~l 529 (529)
T TIGR02857 480 LLLDEPTAHLDAETEALVTEALRALA---------QGR-TVLLVTHRLALAERADRIVVL 529 (529)
T ss_pred EEEeCcccccCHHHHHHHHHHHHHhc---------CCC-EEEEEecCHHHHHhCCEEEeC
Confidence 99999999999999999999999764 344 599999999999999999986
No 44
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=2.7e-76 Score=723.05 Aligned_cols=467 Identities=24% Similarity=0.399 Sum_probs=424.7
Q ss_pred HcCCcccccccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHH-HHHHHH
Q 048639 21 IGGEVGAFDTDLSTGKVITGVSSHMSVIRDAIGEKLGHFLSSFATFFSGVLIAVICCWEVSLLIFLVVPMILV-IGATYT 99 (1139)
Q Consensus 21 l~~~~~~f~~~~~~G~l~~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~l~~l~~~~~~~~-~~~~~~ 99 (1139)
+++|.++|++. ++|++++|+++|++.+++++...+..++..++.+++.++++++++|.+++++++++|++.+ ++.++.
T Consensus 104 ~~~~~~~~~~~-~~g~~~srl~~Dv~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~~~~~~~~~~~~~~~~~ 182 (574)
T PRK11160 104 LPLSPAGLARY-RQGDLLNRLVADVDTLDHLYLRLISPLVAALVVILVLTIGLSFFDLTLALTLGGILLLLLLLLPLLFY 182 (574)
T ss_pred hccChHhhccC-ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78899999987 8999999999999999999999999999999999999999999999999988888887654 457778
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 100 KRMNAVSATKLLYLSEATSMIEQTISQIKTVFAFVGERSEIKSFSDCMDKQIIISRGEALIKGVGLGMFQSVTFCCWALI 179 (1139)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (1139)
++.++..++.++..++.++.+.|.++|+++||+|+.|+.+.++|++..++..+...+..+..+...++..++..+..+++
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 262 (574)
T PRK11160 183 RLGKKPGQDLTHLRAQYRVQLTEWLQGQAELTLFGAEDRYRQQLEQTEQQWLAAQRRQANLTGLSQALMILANGLTVVLM 262 (574)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHCCHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888889999999999999999999999999999999999999999999999999988888888888888777777888
Q ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccCCCCccccCCCccEE
Q 048639 180 IWVGAVVVTAKRSTGGEVLAAVMSILF-GAIALTYAAPDMQVFNQAKAAGFEIFQVIQRKPRISYSSKGKELEKIDGNID 258 (1139)
Q Consensus 180 ~~~g~~~v~~~~l~~g~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~~~~~~~~~~i~ 258 (1139)
+++|++++ +|.+++|.+++++.+... ...|+..+...+..++++..+++|+.++++.+++...... .......+.|+
T Consensus 263 ~~~g~~~~-~g~~t~g~l~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~ri~~ll~~~~~~~~~~~-~~~~~~~~~i~ 340 (574)
T PRK11160 263 LWLAAGGV-GGNAQPGALIALFVFAALAAFEALMPVAGAFQHLGQVIASARRINEITEQKPEVTFPTT-STAAADQVSLT 340 (574)
T ss_pred HHHHHHHh-ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCcc-cCCCCCCCeEE
Confidence 89999884 888999999887766544 3457777888889999999999999999987654321111 11112345799
Q ss_pred EEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcceEEE
Q 048639 259 IRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNIGAV 338 (1139)
Q Consensus 259 ~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v 338 (1139)
++||+|+|++. ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.+||+++++++.+++|++|+||
T Consensus 341 ~~~v~f~y~~~-~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v 419 (574)
T PRK11160 341 LNNVSFTYPDQ-PQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDPQQGEILLNGQPIADYSEAALRQAISVV 419 (574)
T ss_pred EEEEEEECCCC-CCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEhhhCCHHHHHhheeEE
Confidence 99999999753 34799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHccCCCEEE
Q 048639 339 SQEPSLFTGSLMDNIKVGNMDADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVKNPPILL 418 (1139)
Q Consensus 339 ~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~~~~ill 418 (1139)
||+|++|++||+|||.+++|+.+++++.++++.+++++++++ |+|+||.+||+|.+||||||||++||||++++|+|||
T Consensus 420 ~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~al~~~~l~~~i~~-p~GldT~vge~g~~LSgGqrqRialARall~~~~ili 498 (574)
T PRK11160 420 SQRVHLFSATLRDNLLLAAPNASDEALIEVLQQVGLEKLLED-DKGLNAWLGEGGRQLSGGEQRRLGIARALLHDAPLLL 498 (574)
T ss_pred cccchhhcccHHHHhhcCCCccCHHHHHHHHHHcCCHHHHcC-ccccCchhcCCCCCCCHHHHHHHHHHHHHhcCCCEEE
Confidence 999999999999999999998999999999999999999999 9999999999999999999999999999999999999
Q ss_pred EeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhccCEEEEEeCcEEEEecChhhhhccchHHHHHHh
Q 048639 419 LDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVNADMIAVVEDGQVTETGTHHSLLQTSDFYNRLFT 492 (1139)
Q Consensus 419 lDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~ 492 (1139)
||||||+||+++++.+.+.+.+..+++|+|+||||++++..||+|++|++|++++.|+|+|++++++.|+++++
T Consensus 499 lDE~ts~lD~~t~~~i~~~l~~~~~~~tviiitHr~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~g~y~~l~~ 572 (574)
T PRK11160 499 LDEPTEGLDAETERQILELLAEHAQNKTVLMITHRLTGLEQFDRICVMDNGQIIEQGTHQELLAQQGRYYQLKQ 572 (574)
T ss_pred EeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecChhHHHhCCEEEEEeCCeEEEeCCHHHHHhcCcHHHHHHh
Confidence 99999999999999999999998889999999999999999999999999999999999999999999999875
No 45
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=1.5e-76 Score=744.94 Aligned_cols=467 Identities=27% Similarity=0.419 Sum_probs=429.3
Q ss_pred HcCCcccccccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 21 IGGEVGAFDTDLSTGKVITGVSSHMSVIRDAIGEKLGHFLSSFATFFSGVLIAVICCWEVSLLIFLVVPMILVIGATYTK 100 (1139)
Q Consensus 21 l~~~~~~f~~~~~~G~l~~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~l~~l~~~~~~~~~~~~~~~ 100 (1139)
++.|++||++. ++|++++|++ |++.+++++...+...+..+.++++.++++++++|.++++.++++|+++++..++.+
T Consensus 240 l~l~~~~f~~~-~~G~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~l~~~~~~~~~~ 317 (708)
T TIGR01193 240 FELPMSFFSTR-RTGEIVSRFT-DASSIIDALASTILSLFLDMWILVIVGLFLVRQNMLLFLLSLLSIPVYAVIIILFKR 317 (708)
T ss_pred HcCCHHHhCCC-chhHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999987 8999999998 999999999888888888888888888889999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 101 RMNAVSATKLLYLSEATSMIEQTISQIKTVFAFVGERSEIKSFSDCMDKQIIISRGEALIKGVGLGMFQSVTFCCWALII 180 (1139)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (1139)
+.++..++.++..++..+.+.|.++|+++||+||.|+.+.++|.+...+..+...+..........+..++..+..++++
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~il 397 (708)
T TIGR01193 318 TFNKLNHDAMQANAVLNSSIIEDLNGIETIKSLTSEAERYSKIDSEFGDYLNKSFKYQKADQGQQAIKAVTKLILNVVIL 397 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998888888887777777777777777778888
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccCCCCccccCCCccEEEE
Q 048639 181 WVGAVVVTAKRSTGGEVLAAVMSILFGAIALTYAAPDMQVFNQAKAAGFEIFQVIQRKPRISYSSKGKELEKIDGNIDIR 260 (1139)
Q Consensus 181 ~~g~~~v~~~~l~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~~~~~~~~~~i~~~ 260 (1139)
++|++++.+|.+|+|.++++..+......|+..+...+..++.++.+.+|+.++++.+++...........+..+.|+++
T Consensus 398 ~~g~~lv~~g~ls~G~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~~~~~~~~~~~~~I~~~ 477 (708)
T TIGR01193 398 WTGAYLVMRGKLTLGQLITFNALLSYFLTPLENIINLQPKLQAARVANNRLNEVYLVDSEFINKKKRTELNNLNGDIVIN 477 (708)
T ss_pred HHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccccccCCCCCCCcEEEE
Confidence 99999999999999999999999999999999999999999999999999999998655432111101122334679999
Q ss_pred eEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcceEEEec
Q 048639 261 DVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNIGAVSQ 340 (1139)
Q Consensus 261 ~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q 340 (1139)
||+|+|++ ++++|+|+||+|++||++||+||||||||||+++|+|+|+|++|+|.+||+|+++++.+++|++|+||||
T Consensus 478 ~vsf~y~~--~~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~~~~lr~~i~~v~Q 555 (708)
T TIGR01193 478 DVSYSYGY--GSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQARSGEILLNGFSLKDIDRHTLRQFINYLPQ 555 (708)
T ss_pred EEEEEcCC--CCcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCCcEEEECCEEHHHcCHHHHHHheEEEec
Confidence 99999973 3579999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccHHHHHhcC-CCCCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHccCCCEEEE
Q 048639 341 EPSLFTGSLMDNIKVG-NMDADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVKNPPILLL 419 (1139)
Q Consensus 341 ~~~l~~~ti~~ni~~g-~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~~~~illl 419 (1139)
+|+||++||+|||.++ .+++++++++++++.+++++++.++|+|+||.+||+|.+|||||||||+||||++++|+||||
T Consensus 556 ~~~lf~gTI~eNi~l~~~~~~~~~~i~~a~~~a~l~~~i~~lp~gldt~i~e~G~~LSgGQrQRialARall~~p~iliL 635 (708)
T TIGR01193 556 EPYIFSGSILENLLLGAKENVSQDEIWAACEIAEIKDDIENMPLGYQTELSEEGSSISGGQKQRIALARALLTDSKVLIL 635 (708)
T ss_pred CceehhHHHHHHHhccCCCCCCHHHHHHHHHHhCCHHHHHhcccccCcEecCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Confidence 9999999999999999 578899999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhccCEEEEEeCcEEEEecChhhhhccchHHHHHHh
Q 048639 420 DEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVNADMIAVVEDGQVTETGTHHSLLQTSDFYNRLFT 492 (1139)
Q Consensus 420 DEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~ 492 (1139)
|||||+||+++++.+.+.|++. +++|+|+||||++.+..||+|++|++|++++.|+|+++++.++.|+++++
T Consensus 636 DE~Ts~LD~~te~~i~~~L~~~-~~~T~IiitHr~~~~~~~D~i~~l~~G~i~~~G~~~~L~~~~~~y~~l~~ 707 (708)
T TIGR01193 636 DESTSNLDTITEKKIVNNLLNL-QDKTIIFVAHRLSVAKQSDKIIVLDHGKIIEQGSHDELLDRNGFYASLIH 707 (708)
T ss_pred eCccccCCHHHHHHHHHHHHHh-cCCEEEEEecchHHHHcCCEEEEEECCEEEEECCHHHHHhcCCcHHHHhh
Confidence 9999999999999999999875 68999999999999999999999999999999999999998899988864
No 46
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=1.9e-76 Score=745.05 Aligned_cols=466 Identities=27% Similarity=0.369 Sum_probs=431.2
Q ss_pred HcCCcccccccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 21 IGGEVGAFDTDLSTGKVITGVSSHMSVIRDAIGEKLGHFLSSFATFFSGVLIAVICCWEVSLLIFLVVPMILVIGATYTK 100 (1139)
Q Consensus 21 l~~~~~~f~~~~~~G~l~~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~l~~l~~~~~~~~~~~~~~~ 100 (1139)
++.|+++|++. ++|++++|+++| +.+++++...+..++..+..+++.++++++++|.++++.++.+|+++++..++.+
T Consensus 238 l~l~~~~~~~~-~~g~~~~r~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~~~~~~~~~~~~ 315 (710)
T TIGR03796 238 LRLPVRFFAQR-HAGDIASRVQLN-DQVAEFLSGQLATTALDAVMLVFYALLMLLYDPVLTLIGIAFAAINVLALQLVSR 315 (710)
T ss_pred HcCCHHHHcCC-cccHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999987 899999999988 7899999988888899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 101 RMNAVSATKLLYLSEATSMIEQTISQIKTVFAFVGERSEIKSFSDCMDKQIIISRGEALIKGVGLGMFQSVTFCCWALII 180 (1139)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (1139)
+..+..++.++..++..+.+.|.++|+++||++++|+.+.++|.+...+..+...+......+...+..++..+..++++
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~il 395 (710)
T TIGR03796 316 RRVDANRRLQQDAGKLTGVAISGLQSIETLKASGLESDFFSRWAGYQAKLLNAQQELGVLTQILGVLPTLLTSLNSALIL 395 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999888888888888877777788888888889
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccCC----C-Cccc-cCCC
Q 048639 181 WVGAVVVTAKRSTGGEVLAAVMSILFGAIALTYAAPDMQVFNQAKAAGFEIFQVIQRKPRISYSS----K-GKEL-EKID 254 (1139)
Q Consensus 181 ~~g~~~v~~~~l~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~----~-~~~~-~~~~ 254 (1139)
++|++++.+|.+|+|.++++..+......|+..+...+..++.+..+.+|+.++++.+++..... . .... ....
T Consensus 396 ~~g~~~v~~g~lt~G~lva~~~l~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~~~~~~~~~~~~~~~~~~ 475 (710)
T TIGR03796 396 VVGGLRVMEGQLTIGMLVAFQSLMSSFLEPVNNLVGFGGTLQELEGDLNRLDDVLRNPVDPLLEEEEAPAAGSEPSPRLS 475 (710)
T ss_pred HHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccccccccccccccCCCCC
Confidence 99999999999999999999999999999999999999999999999999999998755432111 0 0111 2234
Q ss_pred ccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcc
Q 048639 255 GNIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKN 334 (1139)
Q Consensus 255 ~~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~ 334 (1139)
+.|+++||+|+|++. ++++|+|+||+|++||++|||||||||||||+++|+|+|+|++|+|.+||.|+++++.+++|++
T Consensus 476 ~~I~~~~vsf~y~~~-~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~~~~lr~~ 554 (710)
T TIGR03796 476 GYVELRNITFGYSPL-EPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPWSGEILFDGIPREEIPREVLANS 554 (710)
T ss_pred CeEEEEEEEEecCCC-CCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEeHHHCCHHHHHhh
Confidence 679999999999853 4579999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEecCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHccCC
Q 048639 335 IGAVSQEPSLFTGSLMDNIKVGNMDADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVKNP 414 (1139)
Q Consensus 335 i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~~~ 414 (1139)
|+||||+|++|++||+|||.++.|+.++++++++++.+++++++.++|+|++|.+||+|.+|||||||||+||||++++|
T Consensus 555 i~~v~Q~~~lf~gTi~eNi~l~~~~~~~~~i~~al~~~~l~~~i~~lp~gl~t~i~e~G~~LSGGQrQRiaLARall~~p 634 (710)
T TIGR03796 555 VAMVDQDIFLFEGTVRDNLTLWDPTIPDADLVRACKDAAIHDVITSRPGGYDAELAEGGANLSGGQRQRLEIARALVRNP 634 (710)
T ss_pred eeEEecCChhhhccHHHHhhCCCCCCCHHHHHHHHHHhCCHHHHHhCcCcccceeccCCCCCCHHHHHHHHHHHHHhhCC
Confidence 99999999999999999999998889999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhccCEEEEEeCcEEEEecChhhhhccchHHHHHH
Q 048639 415 PILLLDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVNADMIAVVEDGQVTETGTHHSLLQTSDFYNRLF 491 (1139)
Q Consensus 415 ~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~ 491 (1139)
+|||||||||+||+++++.+.+.+++ .++|+|+||||++++..||+|++|++|++++.|+|+|+++.++.|++++
T Consensus 635 ~iliLDEptS~LD~~te~~i~~~l~~--~~~T~IiitHrl~~i~~~D~Iivl~~G~i~~~G~~~~Ll~~~~~y~~l~ 709 (710)
T TIGR03796 635 SILILDEATSALDPETEKIIDDNLRR--RGCTCIIVAHRLSTIRDCDEIIVLERGKVVQRGTHEELWAVGGAYARLI 709 (710)
T ss_pred CEEEEECccccCCHHHHHHHHHHHHh--cCCEEEEEecCHHHHHhCCEEEEEeCCEEEEecCHHHHHHcCCcHHHHh
Confidence 99999999999999999999999976 5899999999999999999999999999999999999999999998876
No 47
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=1.2e-75 Score=735.30 Aligned_cols=459 Identities=28% Similarity=0.458 Sum_probs=424.2
Q ss_pred HcCCcccccccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 21 IGGEVGAFDTDLSTGKVITGVSSHMSVIRDAIGEKLGHFLSSFATFFSGVLIAVICCWEVSLLIFLVVPMILVIGATYTK 100 (1139)
Q Consensus 21 l~~~~~~f~~~~~~G~l~~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~l~~l~~~~~~~~~~~~~~~ 100 (1139)
+++|+++ +++ ++|++++|+ +|++.+++++...+...+..+..+++.++++++++|.++++.++++|+++++..++.+
T Consensus 231 l~l~~~~-~~~-~~G~~~~r~-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~l~~~~~~~~~~ 307 (694)
T TIGR03375 231 LGLRMEA-RPA-SVGSFANQL-REFESVRDFFTSATLTALIDLPFALLFLLVIAIIGGPLVWVPLVAIPLILLPGLLLQR 307 (694)
T ss_pred hCCCccc-CCC-ChhHHHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 8889987 555 799999999 7999999999888878888888888888889999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 101 RMNAVSATKLLYLSEATSMIEQTISQIKTVFAFVGERSEIKSFSDCMDKQIIISRGEALIKGVGLGMFQSVTFCCWALII 180 (1139)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (1139)
+.++..++.++..++..+.+.|.++|+++||+|++|+.+.++|.+..++..+...+..+.......+..++..+..++++
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il 387 (694)
T TIGR03375 308 PLSRLAEESMRESAQRNAVLVESLSGLETIKALNAEGRFQRRWEQTVAALARSGLKSRFLSNLATNFAQFIQQLVSVAIV 387 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999888888888888888888888889
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccCCCCccccCCCccEEEE
Q 048639 181 WVGAVVVTAKRSTGGEVLAAVMSILFGAIALTYAAPDMQVFNQAKAAGFEIFQVIQRKPRISYSSKGKELEKIDGNIDIR 260 (1139)
Q Consensus 181 ~~g~~~v~~~~l~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~~~~~~~~~~i~~~ 260 (1139)
++|++++.+|.+|+|.+++++.+......|+..+...+..++.+..+.+|+.++++.+++..............+.|+++
T Consensus 388 ~~g~~~v~~g~ls~G~l~a~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~~~~~~~~~~~~~~I~~~ 467 (694)
T TIGR03375 388 VVGVYLISDGELTMGGLIACVMLSGRALAPLGQLAGLLTRYQQAKTALQSLDELMQLPVERPEGTRFLHRPRLQGEIEFR 467 (694)
T ss_pred HHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCccceEEEE
Confidence 99999999999999999999999999999999999999999999999999999998765432111111112234679999
Q ss_pred eEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcceEEEec
Q 048639 261 DVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNIGAVSQ 340 (1139)
Q Consensus 261 ~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q 340 (1139)
||+|+|++. ++++|+|+||+|++||++|||||||||||||+++|+|+|+|++|+|.+||+|+++++.+++|++|+||||
T Consensus 468 ~vsf~Y~~~-~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~l~~~~~~~lr~~i~~v~Q 546 (694)
T TIGR03375 468 NVSFAYPGQ-ETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPTEGSVLLDGVDIRQIDPADLRRNIGYVPQ 546 (694)
T ss_pred EEEEEeCCC-CccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEhhhCCHHHHHhccEEECC
Confidence 999999753 4579999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHccCCCEEEEe
Q 048639 341 EPSLFTGSLMDNIKVGNMDADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVKNPPILLLD 420 (1139)
Q Consensus 341 ~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~~~~illlD 420 (1139)
+|++|++||+|||.+++|++++++++++++.++++++++.+|+|+||.+||+|.+||||||||++||||++++|+|+|||
T Consensus 547 ~~~lf~~TI~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~G~~LSgGQrQRlalARall~~p~iliLD 626 (694)
T TIGR03375 547 DPRLFYGTLRDNIALGAPYADDEEILRAAELAGVTEFVRRHPDGLDMQIGERGRSLSGGQRQAVALARALLRDPPILLLD 626 (694)
T ss_pred ChhhhhhhHHHHHhCCCCCCCHHHHHHHHHHcChHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 99999999999999999989999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhccCEEEEEeCcEEEEecChhhhhcc
Q 048639 421 EATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVNADMIAVVEDGQVTETGTHHSLLQT 483 (1139)
Q Consensus 421 Epts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 483 (1139)
||||+||+++++.+.+.+.+..+++|+|+||||+++++.||+|++|++|++++.|+|+||++.
T Consensus 627 E~Ts~LD~~te~~i~~~l~~~~~~~T~iiItHrl~~~~~~D~iivl~~G~i~e~G~~~eLl~~ 689 (694)
T TIGR03375 627 EPTSAMDNRSEERFKDRLKRWLAGKTLVLVTHRTSLLDLVDRIIVMDNGRIVADGPKDQVLEA 689 (694)
T ss_pred CCCCCCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhCCEEEEEeCCEEEeeCCHHHHHHH
Confidence 999999999999999999998889999999999999999999999999999999999999753
No 48
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=1.9e-75 Score=721.55 Aligned_cols=470 Identities=33% Similarity=0.516 Sum_probs=434.0
Q ss_pred HcCCcccccccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 21 IGGEVGAFDTDLSTGKVITGVSSHMSVIRDAIGEKLGHFLSSFATFFSGVLIAVICCWEVSLLIFLVVPMILVIGATYTK 100 (1139)
Q Consensus 21 l~~~~~~f~~~~~~G~l~~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~l~~l~~~~~~~~~~~~~~~ 100 (1139)
++.|.++|++. ++|++++|+++|++.+++.+...+..++..++.+++.++++++++|.+++++++++|+.+++..++.+
T Consensus 109 ~~~~~~~~~~~-~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~~~~l~~~~~~~~~~ 187 (582)
T PRK11176 109 MGMPVSFFDKQ-STGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSLILIVIAPIVSIAIRVVSK 187 (582)
T ss_pred HcCCHHHhCCC-CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78899999987 89999999999999999999999999999999999999999999999999999988988888889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 101 RMNAVSATKLLYLSEATSMIEQTISQIKTVFAFVGERSEIKSFSDCMDKQIIISRGEALIKGVGLGMFQSVTFCCWALII 180 (1139)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (1139)
+.++..++.++..++..+.+.|.++|+++||+|+.|+.+.++|++..++..+...+..+.......+..++..+..++++
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 267 (582)
T PRK11176 188 RFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNRMRQQGMKMVSASSISDPIIQLIASLALAFVL 267 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999988888888777777777777777888
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccCCCCccccCCCccEEEE
Q 048639 181 WVGAVVVTAKRSTGGEVLAAVMSILFGAIALTYAAPDMQVFNQAKAAGFEIFQVIQRKPRISYSSKGKELEKIDGNIDIR 260 (1139)
Q Consensus 181 ~~g~~~v~~~~l~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~~~~~~~~~~i~~~ 260 (1139)
++|++.+.+|.+++|.+++++.+......|+..+...+..++.++.+.+|+.++++.+++.... ....++..+.|+++
T Consensus 268 ~~g~~~~~~g~is~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~--~~~~~~~~~~i~~~ 345 (582)
T PRK11176 268 YAASFPSVMDTLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDLEQEKDEG--KRVIERAKGDIEFR 345 (582)
T ss_pred HHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCC--CcCCCCCCCeEEEE
Confidence 9999999999999999998888888888999999999999999999999999998765432111 11112233579999
Q ss_pred eEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcceEEEec
Q 048639 261 DVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNIGAVSQ 340 (1139)
Q Consensus 261 ~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q 340 (1139)
||+|+|++. ++++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||+|+++++.+++|++|+||||
T Consensus 346 ~vsf~y~~~-~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~~G~I~i~g~~i~~~~~~~~~~~i~~v~Q 424 (582)
T PRK11176 346 NVTFTYPGK-EVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDIDEGEILLDGHDLRDYTLASLRNQVALVSQ 424 (582)
T ss_pred EEEEecCCC-CCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCCCceEEECCEEhhhcCHHHHHhhceEEcc
Confidence 999999753 4679999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccHHHHHhcCCCC-CCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHccCCCEEEE
Q 048639 341 EPSLFTGSLMDNIKVGNMD-ADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVKNPPILLL 419 (1139)
Q Consensus 341 ~~~l~~~ti~~ni~~g~~~-~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~~~~illl 419 (1139)
+|++|++||+|||.+|+++ .++++++++++.++++++++++|+|+||.+||+|.+|||||||||+|||||+++|+|+||
T Consensus 425 ~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~g~~LSGGqrQRi~LARall~~~~ilil 504 (582)
T PRK11176 425 NVHLFNDTIANNIAYARTEQYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGVLLSGGQRQRIAIARALLRDSPILIL 504 (582)
T ss_pred CceeecchHHHHHhcCCCCCCCHHHHHHHHHHhCcHHHHHhcccccCceeCCCCCcCCHHHHHHHHHHHHHHhCCCEEEE
Confidence 9999999999999999764 689999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhccCEEEEEeCcEEEEecChhhhhccchHHHHHHhhc
Q 048639 420 DEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVNADMIAVVEDGQVTETGTHHSLLQTSDFYNRLFTMQ 494 (1139)
Q Consensus 420 DEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~ 494 (1139)
|||||+||+++++.+.+.+.++.+++|+|+||||++.++.||+|++|++|++++.|+|+++++.++.|++++..+
T Consensus 505 DEptsaLD~~t~~~i~~~l~~~~~~~tvI~VtHr~~~~~~~D~Ii~l~~g~i~e~g~~~~l~~~~~~y~~l~~~~ 579 (582)
T PRK11176 505 DEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEILVVEDGEIVERGTHAELLAQNGVYAQLHKMQ 579 (582)
T ss_pred ECccccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEeCCHHHHHhCCChHHHHHHHH
Confidence 999999999999999999999878899999999999999999999999999999999999999999999998754
No 49
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=2.4e-74 Score=703.53 Aligned_cols=531 Identities=21% Similarity=0.296 Sum_probs=448.5
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 569 GTVAAAFSGISKPLFGFFIITIGVAYYDPQAKQEVGWYSLAFSLVGLFSLFTHTLQHYFFGVVGEKAMTNLRRTLYTGVL 648 (1139)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll 648 (1139)
.+++.++..+.....++++..+++.............+..+++++.++..++.+++.++....+.+...++|.++|++++
T Consensus 11 ~~~~~~~~~~~~l~~p~~~~~iid~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll 90 (544)
T TIGR01842 11 VGLFSFVINILMLAPPLYMLQVYDRVLTSGSVPTLLMLTVLALGLYLFLGLLDALRSFVLVRIGEKLDGALNQPIFAASF 90 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33333444444444455555555544322112223345555666667778888899999999999999999999999999
Q ss_pred cCCCcccccCCCChhHHHHHHHhcHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Q 048639 649 RNEIAWFEKPQNDAGSLTSRIVSDTSMVKAIISD-RMSVIVQCISSILIATIVSLVVDWRMALVAWAVMPCHFIGGLIQA 727 (1139)
Q Consensus 649 ~~~~~ff~~~~~~~G~i~~r~~~D~~~i~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~~~~~p~~~~~~~~~~ 727 (1139)
+.|+.. .+...+++++|++.+++.+.. .+..++..++.++. +++++.++|.+++++++.+|++++..++..
T Consensus 91 ~~~~~~-------~~~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~l~li~l~~~~l~~~i~~~~~ 162 (544)
T TIGR01842 91 SATLRR-------GKIDGLQALRDLDQLRQFLTGPGLFAFFDAPWMPIY-LLVCFLLHPWIGILALGGAVVLVGLALLNN 162 (544)
T ss_pred cCcccC-------ccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH-HHHHHHHhhHHHHHHHHHHHHHHHHHHHhh
Confidence 999842 256788999999999988876 45556665555544 456788999999988888887777666666
Q ss_pred HhhhchhhhHHHHHHHHHHHHHHhhcchHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 728 KSAQGFSGDSAAAHTEFISLTSESASNIRTVASFCHEENILQKAKISLEKTKRSSRKESIKYGVIQGFSLCLWNIAHAVA 807 (1139)
Q Consensus 728 ~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 (1139)
+..++..++.++...+..+++.|+++|+++||+|+.++.+.++|.+..++..+...+.....+....+...+..+..+++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (544)
T TIGR01842 163 RATKKPLKEATEASIRANNLADSALRNAEVIEAMGMMGNLTKRWGRFHSKYLSAQSAASDRAGMLSNLSKYFRIVLQSLV 242 (544)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHhcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666666777777888999999999999999999999999999999998888777777777777777777777777888
Q ss_pred HHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCccccEE
Q 048639 808 LWYTAVLIDKKQATFRDGIRAYQIFSLTVPSITELWTLIPTVISAITVLAPAFEILDRKTEIEPDAPESSESGRIKGRIE 887 (1139)
Q Consensus 808 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~ 887 (1139)
+++|++++..|.+++|.++++..+......++..+...+..+..+..+.+|+.++++.+++.++. .+.+...+.|+
T Consensus 243 ~~~g~~l~~~g~it~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~----~~~~~~~~~i~ 318 (544)
T TIGR01842 243 LGLGAYLAIDGEITPGMMIAGSILVGRALAPIDGAIGGWKQFSGARQAYKRLNELLANYPSRDPA----MPLPEPEGHLS 318 (544)
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCC----CCCCCCCCeEE
Confidence 89999999999999999999999999999999999999999999999999999999765543211 11122346799
Q ss_pred EEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhceEE
Q 048639 888 FQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQIGLV 967 (1139)
Q Consensus 888 ~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~~V 967 (1139)
++||+|+|++. +.++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|.+||+|+++++.+.+|++++||
T Consensus 319 ~~~v~~~y~~~-~~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~v 397 (544)
T TIGR01842 319 VENVTIVPPGG-KKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSGSVRLDGADLKQWDRETFGKHIGYL 397 (544)
T ss_pred EEEEEEEcCCC-CccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEehhhCCHHHHhhheEEe
Confidence 99999999743 34799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccccHHHHhccCCCcCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhcCCCCEEE
Q 048639 968 QQEPLLFSCSIRNNICYGNEAASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIARTLLKRPAIML 1047 (1139)
Q Consensus 968 ~Qdp~LF~gTIreNL~~~~~~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalARALlr~p~ILl 1047 (1139)
||||.+|++|++|||.++.+++++++++++++.++++++++++|+|+||.+||+|.+||||||||++||||++++|+|||
T Consensus 398 ~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGq~qrl~lARall~~~~ili 477 (544)
T TIGR01842 398 PQDVELFPGTVAENIARFGENADPEKIIEAAKLAGVHELILRLPDGYDTVIGPGGATLSGGQRQRIALARALYGDPKLVV 477 (544)
T ss_pred cCCcccccccHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCCcCCCCHHHHHHHHHHHHHhcCCCEEE
Confidence 99999999999999998777789999999999999999999999999999999999999999999999999999999999
Q ss_pred eeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhcCCEEEEEeCCEEEEecChhHHhh
Q 048639 1048 LDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVINSDVIVVMDKGEVVEMGSHSTLVA 1121 (1139)
Q Consensus 1048 LDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~~DrI~vl~~G~ive~G~~~eLl~ 1121 (1139)
||||||+||+++++.+.+.|++.. .+++|+|+||||++++..||+|++|++|+++|.|+|++|++
T Consensus 478 lDEpts~LD~~~~~~i~~~l~~~~---------~~~~tvi~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~ 542 (544)
T TIGR01842 478 LDEPNSNLDEEGEQALANAIKALK---------ARGITVVVITHRPSLLGCVDKILVLQDGRIARFGERDEVLA 542 (544)
T ss_pred EeCCccccCHHHHHHHHHHHHHHh---------hCCCEEEEEeCCHHHHHhCCEEEEEECCEEEeeCCHHHHhh
Confidence 999999999999999999998753 23346999999999999999999999999999999999985
No 50
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.2e-75 Score=652.92 Aligned_cols=483 Identities=30% Similarity=0.428 Sum_probs=419.0
Q ss_pred HHHHHHHHHHHHHH---------HcCCcccccccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhH
Q 048639 7 ILSWHPKGNRVLMK---------IGGEVGAFDTDLSTGKVITGVSSHMSVIRDAIGEKLGHFLSSFATFFSGV-LIAVIC 76 (1139)
Q Consensus 7 ~~~~~~~~~~~~~~---------l~~~~~~f~~~~~~G~l~~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~-i~~~~~ 76 (1139)
.+.|.++.+++.++ +.++.++|.+. ++|++.+.+..-...|.+.+...+..++..++-+.... ++..-+
T Consensus 95 ~~vfa~v~q~~iR~~~~~vf~~~~~ld~~~~~~~-~tG~l~~~idRgsraI~~vl~~~V~~i~p~~~~i~~v~~~l~~~~ 173 (591)
T KOG0057|consen 95 NFVFAKVAQRVIRDSSSDVFRHLMSLDLSFFLSR-GTGALNRIIDRGSRAISFVLSAMVFNIIPTLFEIALVSGILYYKF 173 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHhhcCC-CcchHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 45666677777666 78899999986 89999999999999999998877777776655433333 333445
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Q 048639 77 CWEVSLLIFLVVPMILVIGATYTKRMNAVSATKLLYLSEATSMIEQTISQIKTVFAFVGERSEIKSFSDCMDKQIIISRG 156 (1139)
Q Consensus 77 ~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~ 156 (1139)
+...+++.+..+..+..+.....++..+..++..++.+...+.+-|+|.+..+||+||.|+++.++|.....++.+...+
T Consensus 174 Ga~~~li~~~~v~~Y~a~Ti~~t~~Rn~fR~~~N~Adn~as~~~~dsL~Nye~VKsfNnE~~Ea~~y~~~l~~~~~~~~~ 253 (591)
T KOG0057|consen 174 GAAFALITLGTVGAYAAFTIVVTRWRNRFRKAMNNADNSASRRAYDSLINYEIVKSFNNEEYEASRYDGSLKTYERAGLK 253 (591)
T ss_pred chHHHHHHHHHHHHhheeEEeehhHHHHHHHHHHhhhhHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHHHHHHHHhhhh
Confidence 66677777777777777777777888888888899999999999999999999999999999999999999999888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 048639 157 EALIKGVGLGMFQSVTFCCWALIIWVGAVVVTAKRSTGGEVLAAVMSILFGAIALTYAAPDMQVFNQAKAAGFEIFQVIQ 236 (1139)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~l~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ri~~~l~ 236 (1139)
.....++....-.++.....+.+.+.|..-+.++.+|.|+++.......++..|+..+......+.++..-...++...+
T Consensus 254 ~~~sl~~lnfgQ~~iFsv~~~~im~l~~~gi~~~~mtvgdlv~~n~l~~qL~~~l~~Lg~vyr~~~q~l~Dm~~~~~l~~ 333 (591)
T KOG0057|consen 254 YSSSLAFLNFGQKAIFSVALTFIMVLGSNGIAAGKMTVGDLVMVNSLLFQLSLPLNFLGSVYRELRQALTDMRTLFILLE 333 (591)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccccccchhhHHHHHHHHHhHHHHHHHHHHHHHHHHHhHHHHHhhhh
Confidence 77666666655555555666677778888888999999999998888889999999988887777777666655555443
Q ss_pred cCCCCccCCCCccccCCCccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEE
Q 048639 237 RKPRISYSSKGKELEKIDGNIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDI 316 (1139)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i 316 (1139)
....+.. ...+...+++.|+|+||+|+|++ ++++|+++||+|++||+|||||+|||||||++++|+|+++ ++|+|
T Consensus 334 ~~~~i~~--~~~~i~~~~~~I~F~dV~f~y~~--k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d-~sG~I 408 (591)
T KOG0057|consen 334 VDEDIQE--AALPIELFGGSIEFDDVHFSYGP--KRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD-YSGSI 408 (591)
T ss_pred hhhhhhh--ccCCcccCCCcEEEEeeEEEeCC--CCceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc-cCCcE
Confidence 3222211 11233445577999999999973 4579999999999999999999999999999999999999 99999
Q ss_pred EECCccCCCCCHHHHhcceEEEecCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCC
Q 048639 317 LIDSLNIKDLDLKSLRKNIGAVSQEPSLFTGSLMDNIKVGNMDADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQL 396 (1139)
Q Consensus 317 ~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~L 396 (1139)
+|||+|+++++++.+|+.|||||||..||++||.+||.+|+|.++++++.++|+.+++||.+.++|+||+|.+||+|..|
T Consensus 409 ~IdG~dik~~~~~SlR~~Ig~VPQd~~LFndTIl~NI~YGn~sas~eeV~e~~k~a~~hd~i~~l~~GY~T~VGerG~~L 488 (591)
T KOG0057|consen 409 LIDGQDIKEVSLESLRQSIGVVPQDSVLFNDTILYNIKYGNPSASDEEVVEACKRAGLHDVISRLPDGYQTLVGERGLML 488 (591)
T ss_pred EECCeeHhhhChHHhhhheeEeCCcccccchhHHHHhhcCCCCcCHHHHHHHHHHcCcHHHHHhccccchhhHhhccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhccCEEEEEeCcEEEEecC
Q 048639 397 SGGQKQRIAIARAIVKNPPILLLDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVNADMIAVVEDGQVTETGT 476 (1139)
Q Consensus 397 SgGqkqRi~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~ 476 (1139)
||||||||+||||+++||||+++|||||+||.+||+.+.+.+.+...+||+|+|.||++++++||+|++|++|++.+.|+
T Consensus 489 SGGekQrvslaRa~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~~~~rTvI~IvH~l~ll~~~DkI~~l~nG~v~e~gt 568 (591)
T KOG0057|consen 489 SGGEKQRVSLARAFLKDAPILLLDEATSALDSETEREILDMIMDVMSGRTVIMIVHRLDLLKDFDKIIVLDNGTVKEYGT 568 (591)
T ss_pred ccchHHHHHHHHHHhcCCCeEEecCcccccchhhHHHHHHHHHHhcCCCeEEEEEecchhHhcCCEEEEEECCeeEEecc
Confidence 99999999999999999999999999999999999999999999888999999999999999999999999999999999
Q ss_pred hhhhhccchHHHHHHhhcc
Q 048639 477 HHSLLQTSDFYNRLFTMQN 495 (1139)
Q Consensus 477 ~~~l~~~~~~~~~~~~~~~ 495 (1139)
|+||++.++.|+++|..|.
T Consensus 569 h~ell~~s~~~~~~w~~~~ 587 (591)
T KOG0057|consen 569 HSELLAPSELYADLWTTQT 587 (591)
T ss_pred HHHHhhhhhHHHHHhcccc
Confidence 9999999999999997664
No 51
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.2e-77 Score=647.30 Aligned_cols=472 Identities=28% Similarity=0.410 Sum_probs=410.5
Q ss_pred HcCCcccccccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhHhHHHHHHHHHHHHHHHHHHHHHH
Q 048639 21 IGGEVGAFDTDLSTGKVITGVSSHMSVIRDAIGEKLGHFLSSFATFFSGVL-IAVICCWEVSLLIFLVVPMILVIGATYT 99 (1139)
Q Consensus 21 l~~~~~~f~~~~~~G~l~~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~~l~l~~l~~~~~~~~~~~~~~ 99 (1139)
..+++.|+-.+ ++|+++.-++...+.+. +....+.++...+.-+.++++ +...++|++++++++++.++..+...+.
T Consensus 303 h~LSlrwHL~r-rtGeVLrvmdrGtssvt-ll~yvVF~i~PtllDl~va~vYF~~~Fn~wFgLIVfl~m~lY~~~Ti~iT 380 (790)
T KOG0056|consen 303 HNLSLRWHLNR-RTGEVLRVMDRGTSSVT-LLEYVVFQIGPTLLDLGVAMVYFFIKFNIWFGLIVFLMMLLYCYVTIKIT 380 (790)
T ss_pred Hhhceeeeecc-cccceeehhccCcchhh-HHHHHHhhcccHHHHhhhhhhhhhhhHhHHHHHHHHHHHHHHhheeeeee
Confidence 56788899887 89999999888777665 333333333333333333333 3345789999999998888887777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 100 KRMNAVSATKLLYLSEATSMIEQTISQIKTVFAFVGERSEIKSFSDCMDKQIIISRGEALIKGVGLGMFQSVTFCCWALI 179 (1139)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (1139)
.+..+..+++..++.+-.+.-.+++-+.+|||-|+.|+++.++|.+...++.+.+.|...--.+.+..-..+..+..+..
T Consensus 381 eWRTk~rR~Mn~~~nesrAr~vDsllNFETVKyy~Ae~yEverYreAil~Yqk~E~ks~~sLnfLN~~Qn~Ii~lgll~g 460 (790)
T KOG0056|consen 381 EWRTKARRKMNNSWNESRARQVDSLLNFETVKYYNAEDYEVERYREAILKYQKQEWKSLASLNFLNIVQNGIIGLGLLAG 460 (790)
T ss_pred hhhHHHHHHhhhhhhhhhhhhhhhhhcchhhhccCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHhhh
Confidence 77778888888888888888999999999999999999999999999999888877765444443333333333444444
Q ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccCCCCccccCCCccEEE
Q 048639 180 IWVGAVVVTAKRSTGGEVLAAVMSILFGAIALTYAAPDMQVFNQAKAAGFEIFQVIQRKPRISYSSKGKELEKIDGNIDI 259 (1139)
Q Consensus 180 ~~~g~~~v~~~~l~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~~~~~~~~~~i~~ 259 (1139)
-.+.+|.|..+.+|+|+.+-+..|++.+.+|+..+......++....-.+++++++++++++.+.+...+....+|.|+|
T Consensus 461 sll~aY~Vt~q~ltVGDfVlf~TYliqLy~PLN~FGT~YR~iQ~nfiDmEnmfdllkee~eVvd~P~a~pl~~~~G~i~f 540 (790)
T KOG0056|consen 461 SLLCAYRVTEQTLTVGDFVLFLTYLIQLYMPLNFFGTYYRSIQKNFIDMENMFDLLKEEPEVVDLPGAPPLKVTQGKIEF 540 (790)
T ss_pred hheeeeeeeeccccccceehHHHHHHHHhCchHHHHHHHHHHHHhhhhHHHHHHHhhcCchhhcCCCCCCccccCCeEEE
Confidence 45567888899999999999999999999999999999999999999999999999988877443333344455689999
Q ss_pred EeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcceEEEe
Q 048639 260 RDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNIGAVS 339 (1139)
Q Consensus 260 ~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~ 339 (1139)
+||+|.|+ +++|+|+||||++.||+.+|+|||||+||||++++|.++++.++|.|.+||+|+++....++|++||.||
T Consensus 541 snvtF~Y~--p~k~vl~disF~v~pGktvAlVG~SGaGKSTimRlLfRffdv~sGsI~iDgqdIrnvt~~SLRs~IGVVP 618 (790)
T KOG0056|consen 541 SNVTFAYD--PGKPVLSDISFTVQPGKTVALVGPSGAGKSTIMRLLFRFFDVNSGSITIDGQDIRNVTQSSLRSSIGVVP 618 (790)
T ss_pred EEeEEecC--CCCceeecceEEecCCcEEEEECCCCCchhHHHHHHHHHhhccCceEEEcCchHHHHHHHHHHHhcCccc
Confidence 99999997 4678999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHccCCCEEEE
Q 048639 340 QEPSLFTGSLMDNIKVGNMDADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVKNPPILLL 419 (1139)
Q Consensus 340 Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~~~~illl 419 (1139)
||..|||+||..||.+++|.+++|++++|++.+++||.|.++|+||+|.+||+|-.|||||||||||||+++++|.|++|
T Consensus 619 QDtvLFNdTI~yNIryak~~AsneevyaAAkAA~IHdrIl~fPegY~t~VGERGLkLSGGEKQRVAiARtiLK~P~iIlL 698 (790)
T KOG0056|consen 619 QDTVLFNDTILYNIRYAKPSASNEEVYAAAKAAQIHDRILQFPEGYNTRVGERGLKLSGGEKQRVAIARTILKAPSIILL 698 (790)
T ss_pred CcceeecceeeeheeecCCCCChHHHHHHHHHhhHHHHHhcCchhhhhhhhhcccccCCcchhhHHHHHHHhcCCcEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhccCEEEEEeCcEEEEecChhhhhcc-chHHHHHHhhccC
Q 048639 420 DEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVNADMIAVVEDGQVTETGTHHSLLQT-SDFYNRLFTMQNL 496 (1139)
Q Consensus 420 DEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~-~~~~~~~~~~~~~ 496 (1139)
||+|||||..+|+.|+.++.++..++|.|+|+||++++-+||.|+|+++|+|+|.|+|+||+.. .|.|+++|+.|+.
T Consensus 699 DEATSALDT~tER~IQaaL~rlca~RTtIVvAHRLSTivnAD~ILvi~~G~IvErG~HeeLl~rdgG~Ya~MWq~qqa 776 (790)
T KOG0056|consen 699 DEATSALDTNTERAIQAALARLCANRTTIVVAHRLSTIVNADLILVISNGRIVERGRHEELLKRDGGAYADMWQAQQA 776 (790)
T ss_pred cchhhhcCCccHHHHHHHHHHHhcCCceEEEeeeehheecccEEEEEeCCeEeecCcHHHHHhccCCcHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999999999987 8999999977654
No 52
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=3.5e-74 Score=721.23 Aligned_cols=470 Identities=30% Similarity=0.438 Sum_probs=434.0
Q ss_pred HcCCcccccccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 21 IGGEVGAFDTDLSTGKVITGVSSHMSVIRDAIGEKLGHFLSSFATFFSGVLIAVICCWEVSLLIFLVVPMILVIGATYTK 100 (1139)
Q Consensus 21 l~~~~~~f~~~~~~G~l~~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~l~~l~~~~~~~~~~~~~~~ 100 (1139)
+++|++||++. ++|++++|+ +|++.+++++...+..++..+..+++.++++++++|.+++++++++|+++++..++.+
T Consensus 223 ~~l~~~~f~~~-~~g~~~~rl-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~~~~~i~~~~~~ 300 (694)
T TIGR01846 223 LGLPLGYFESR-RVGDTVARV-RELEQIRNFLTGSALTVVLDLLFVVVFLAVMFFYSPTLTGVVIGSLVCYALLSVFVGP 300 (694)
T ss_pred HcCCHHHcCCC-CHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999997 899999999 6999999999888777777777777778889999999999999999999988999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 101 RMNAVSATKLLYLSEATSMIEQTISQIKTVFAFVGERSEIKSFSDCMDKQIIISRGEALIKGVGLGMFQSVTFCCWALII 180 (1139)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (1139)
+.++..++..+..++..+.+.|.++|+++||+||.|+.+.++|.+..++..+...+..+..+....+..++..+..++++
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~il 380 (694)
T TIGR01846 301 ILRKRVEDKFERSAAATSFLVESVTGIETIKATATEPQFQNRWDRQLAAYVAASFRVTNLGNIAGQAIELIQKLTFAILL 380 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 99999999999999999999999999999999999999999999999999999998888888888888888888888889
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccCCCCccccCCCccEEEE
Q 048639 181 WVGAVVVTAKRSTGGEVLAAVMSILFGAIALTYAAPDMQVFNQAKAAGFEIFQVIQRKPRISYSSKGKELEKIDGNIDIR 260 (1139)
Q Consensus 181 ~~g~~~v~~~~l~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~~~~~~~~~~i~~~ 260 (1139)
++|++++.+|.+|+|.++++.++......|+..+...+..+++++.+.+|+.++++.+++.... .....+...+.|+++
T Consensus 381 ~~g~~lv~~g~it~G~lia~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~-~~~~~~~~~~~i~~~ 459 (694)
T TIGR01846 381 WFGAHLVIGGALSPGQLVAFNMLAGRVTQPVLRLAQLWQDFQQTGIALERLGDILNSPTEPRSA-GLAALPELRGAITFE 459 (694)
T ss_pred HHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCccCC-CCCCCCCCCCeEEEE
Confidence 9999999999999999999999999999999999999999999999999999999866543211 111122334679999
Q ss_pred eEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcceEEEec
Q 048639 261 DVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNIGAVSQ 340 (1139)
Q Consensus 261 ~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q 340 (1139)
||+|+|++. ++++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.+||+|+++++.+++|++|+||+|
T Consensus 460 ~vsf~y~~~-~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~~G~I~idg~~i~~~~~~~~r~~i~~v~q 538 (694)
T TIGR01846 460 NIRFRYAPD-SPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQHGQVLVDGVDLAIADPAWLRRQMGVVLQ 538 (694)
T ss_pred EEEEEcCCC-CccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEehhhCCHHHHHHhCeEEcc
Confidence 999999743 3569999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHccCCCEEEEe
Q 048639 341 EPSLFTGSLMDNIKVGNMDADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVKNPPILLLD 420 (1139)
Q Consensus 341 ~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~~~~illlD 420 (1139)
+|++|++|++|||.+++|+.++++++++|+.+++++++.++|+|++|.+|++|.+||||||||++||||++++|+|||||
T Consensus 539 ~~~lf~~ti~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~g~~LSgGq~qri~lARall~~~~ililD 618 (694)
T TIGR01846 539 ENVLFSRSIRDNIALCNPGAPFEHVIHAAKLAGAHDFISELPQGYNTEVGEKGANLSGGQRQRIAIARALVGNPRILIFD 618 (694)
T ss_pred CCeehhhhHHHHHhcCCCCCCHHHHHHHHHHcChHHHHHhCcCccCcEecCCCCCCCHHHHHHHHHHHHHHhCCCEEEEE
Confidence 99999999999999999889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhccCEEEEEeCcEEEEecChhhhhccchHHHHHHhhc
Q 048639 421 EATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVNADMIAVVEDGQVTETGTHHSLLQTSDFYNRLFTMQ 494 (1139)
Q Consensus 421 Epts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~ 494 (1139)
||||+||+++++.+.+.+++..+++|+|+||||++.++.||+|++|++|+++++|+|++++++++.|++++..+
T Consensus 619 Epts~LD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~ii~l~~G~i~~~g~~~~l~~~~~~y~~l~~~~ 692 (694)
T TIGR01846 619 EATSALDYESEALIMRNMREICRGRTVIIIAHRLSTVRACDRIIVLEKGQIAESGRHEELLALQGLYARLWQQQ 692 (694)
T ss_pred CCCcCCCHHHHHHHHHHHHHHhCCCEEEEEeCChHHHHhCCEEEEEeCCEEEEeCCHHHHHHcCChHHHHHHhh
Confidence 99999999999999999999888999999999999999999999999999999999999999999999998754
No 53
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=5.5e-74 Score=708.77 Aligned_cols=467 Identities=28% Similarity=0.432 Sum_probs=415.3
Q ss_pred HcCCcccccccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 21 IGGEVGAFDTDLSTGKVITGVSSHMSVIRDAIGEKLGHFLSSFATFFSGVLIAVICCWEVSLLIFLVVPMILVIGATYTK 100 (1139)
Q Consensus 21 l~~~~~~f~~~~~~G~l~~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~l~~l~~~~~~~~~~~~~~~ 100 (1139)
++.|.++|+.. ++|++++|+++|++.+++.+...+..++..+..+++.++++++++|.+++++++++|+++++..++.+
T Consensus 109 ~~~~~~~~~~~-~~g~~~~~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~i~~~~~~~~~~ 187 (592)
T PRK10790 109 LRQPLSAFDTQ-PVGQLISRVTNDTEVIRDLYVTVVATVLRSAALIGAMLVAMFSLDWRMALVAIMIFPAVLVVMVIYQR 187 (592)
T ss_pred HcCCHHHhCCC-ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78899999987 89999999999999999999999999999988888888999999999999988888888888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Q 048639 101 RMNAVSATKLLYLSEATSMIEQTISQIKTVFAFVGERSEIKSFSDCMDKQIIISRGEALIKGVG-LGMFQSVTFCCWALI 179 (1139)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 179 (1139)
+.++..++.++..++..+.+.|.+.|+++||+|+.|+.+.+++.+..++..+...+.....+.. ..+..++..+..+++
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (592)
T PRK10790 188 YSTPIVRRVRAYLADINDGFNEVINGMSVIQQFRQQARFGERMGEASRSHYMARMQTLRLDGFLLRPLLSLFSALILCGL 267 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888888889999999999999999999999999999999998888777766666555433 233333333322223
Q ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccCCCCccccCCCccEEE
Q 048639 180 IWVGAVVVTAKRSTGGEVLAAVMSILFGAIALTYAAPDMQVFNQAKAAGFEIFQVIQRKPRISYSSKGKELEKIDGNIDI 259 (1139)
Q Consensus 180 ~~~g~~~v~~~~l~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~~~~~~~~~~i~~ 259 (1139)
++++++ +..|.+++|.+++++.+......|+..+...+..+.++..+++|+.++++.+++.... .......+.|++
T Consensus 268 ~~~~~~-~~~g~is~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~---~~~~~~~~~i~~ 343 (592)
T PRK10790 268 LMLFGF-SASGTIEVGVLYAFISYLGRLNEPLIELTTQQSMLQQAVVAGERVFELMDGPRQQYGN---DDRPLQSGRIDI 343 (592)
T ss_pred HHHHHH-HHCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCCC---CccCCCCCeEEE
Confidence 333334 5789999999999999999999999999999999999999999999999765432111 111122357999
Q ss_pred EeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcceEEEe
Q 048639 260 RDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNIGAVS 339 (1139)
Q Consensus 260 ~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~ 339 (1139)
+|++|+|++ ++++|+|+||++++||++||+|+||||||||+++|+|+|+|++|+|.+||+|+++++++++|++|+|||
T Consensus 344 ~~v~f~y~~--~~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~~G~I~idg~~i~~~~~~~l~~~i~~v~ 421 (592)
T PRK10790 344 DNVSFAYRD--DNLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLTEGEIRLDGRPLSSLSHSVLRQGVAMVQ 421 (592)
T ss_pred EEEEEEeCC--CCceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEhhhCCHHHHHhheEEEc
Confidence 999999974 356999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHccCCCEEEE
Q 048639 340 QEPSLFTGSLMDNIKVGNMDADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVKNPPILLL 419 (1139)
Q Consensus 340 Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~~~~illl 419 (1139)
|+|++|++||+|||.+|+ +++++++.++++.++++++++++|+|+||.+||+|.+|||||||||+|||||+++|+|+||
T Consensus 422 Q~~~lF~~Ti~~NI~~~~-~~~d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~g~~LSGGqrQRialARaLl~~~~illl 500 (592)
T PRK10790 422 QDPVVLADTFLANVTLGR-DISEEQVWQALETVQLAELARSLPDGLYTPLGEQGNNLSVGQKQLLALARVLVQTPQILIL 500 (592)
T ss_pred cCCccccchHHHHHHhCC-CCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHHHHHHHHhCCCEEEE
Confidence 999999999999999998 6889999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhccCEEEEEeCcEEEEecChhhhhccchHHHHHHhhcc
Q 048639 420 DEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVNADMIAVVEDGQVTETGTHHSLLQTSDFYNRLFTMQN 495 (1139)
Q Consensus 420 DEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~ 495 (1139)
|||||+||+++++.+.+.++++.+++|+|+||||++.++.||+|++|++|++++.|+|+|+++.++.|++++..+.
T Consensus 501 DEpts~LD~~t~~~i~~~l~~~~~~~tvIivtHr~~~l~~~D~ii~l~~G~i~~~G~~~~L~~~~~~y~~l~~~~~ 576 (592)
T PRK10790 501 DEATANIDSGTEQAIQQALAAVREHTTLVVIAHRLSTIVEADTILVLHRGQAVEQGTHQQLLAAQGRYWQMYQLQL 576 (592)
T ss_pred eCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEEcCHHHHHhCCCHHHHHHHHHh
Confidence 9999999999999999999998788999999999999999999999999999999999999999999999997654
No 54
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=1.2e-73 Score=699.86 Aligned_cols=471 Identities=27% Similarity=0.405 Sum_probs=428.4
Q ss_pred HcCCcccccccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHhHHHHHHHHHHHHHHHHHHHHHH
Q 048639 21 IGGEVGAFDTDLSTGKVITGVSSHMSVIRDAIGEKLGHFLSSFATFFSGVLIA-VICCWEVSLLIFLVVPMILVIGATYT 99 (1139)
Q Consensus 21 l~~~~~~f~~~~~~G~l~~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~l~l~~l~~~~~~~~~~~~~~ 99 (1139)
+++|.++|+++ ++|++++|+++|++.++..+...+..++..++.+++.++++ ++++|.+++++++++|+++++...+.
T Consensus 80 l~~~~~~~~~~-~~g~i~srl~~Dv~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~l~~~~~~~~~ 158 (569)
T PRK10789 80 SRQHPEFYLRH-RTGDLMARATNDVDRVVFAAGEGVLTLVDSLVMGCAVLIVMSTQISWQLTLLALLPMPVMAIMIKRYG 158 (569)
T ss_pred HcCCHHHHcCC-CHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 88899999987 89999999999999999888777778887766666655555 58999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 100 KRMNAVSATKLLYLSEATSMIEQTISQIKTVFAFVGERSEIKSFSDCMDKQIIISRGEALIKGVGLGMFQSVTFCCWALI 179 (1139)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (1139)
++.++..++.++..+++.+.+.|.++|+++||+|++|+.+.++|.+..++..+...+..+..+....+...+..+..+++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (569)
T PRK10789 159 DQLHERFKLAQAAFSSLNDRTQESLTSIRMIKAFGLEDRQSALFAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLA 238 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998888888888877777777766666777778
Q ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccCCCCccccCCCccEEE
Q 048639 180 IWVGAVVVTAKRSTGGEVLAAVMSILFGAIALTYAAPDMQVFNQAKAAGFEIFQVIQRKPRISYSSKGKELEKIDGNIDI 259 (1139)
Q Consensus 180 ~~~g~~~v~~~~l~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~~~~~~~~~~i~~ 259 (1139)
+++|++++.+|.+|+|.++++..+......|+..+...+..+..+..+.+|+.++++.+++.... ....+..++.|++
T Consensus 239 l~~g~~lv~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~ll~~~~~~~~~--~~~~~~~~~~I~~ 316 (569)
T PRK10789 239 IGGGSWMVVNGSLTLGQLTSFVMYLGLMIWPMLALAWMFNIVERGSAAYSRIRAMLAEAPVVKDG--SEPVPEGRGELDV 316 (569)
T ss_pred HHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCC--CCCCCCCCCcEEE
Confidence 88999999999999999999999999999999999999999999999999999999865442111 1111223457999
Q ss_pred EeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcceEEEe
Q 048639 260 RDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNIGAVS 339 (1139)
Q Consensus 260 ~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~ 339 (1139)
+|++|+|+.. ++++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.+||+++.+++.+++|++|+||+
T Consensus 317 ~~v~~~y~~~-~~~~l~~i~~~i~~G~~~~ivG~sGsGKSTLl~ll~g~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~ 395 (569)
T PRK10789 317 NIRQFTYPQT-DHPALENVNFTLKPGQMLGICGPTGSGKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDSWRSRLAVVS 395 (569)
T ss_pred EEEEEECCCC-CCccccCeeEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEHhhCCHHHHHhheEEEc
Confidence 9999999753 357999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHccCCCEEEE
Q 048639 340 QEPSLFTGSLMDNIKVGNMDADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVKNPPILLL 419 (1139)
Q Consensus 340 Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~~~~illl 419 (1139)
|+|++|++|++|||.++.++.++++++++++.+++++++.++|+|++|.+|++|.+||||||||++||||++++|+|+||
T Consensus 396 q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~l~~~i~~lp~gl~t~~~~~g~~LSgGq~qRi~lARall~~~~illl 475 (569)
T PRK10789 396 QTPFLFSDTVANNIALGRPDATQQEIEHVARLASVHDDILRLPQGYDTEVGERGVMLSGGQKQRISIARALLLNAEILIL 475 (569)
T ss_pred cCCeeccccHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99999999999999999888899999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhccCEEEEEeCcEEEEecChhhhhccchHHHHHHhhcc
Q 048639 420 DEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVNADMIAVVEDGQVTETGTHHSLLQTSDFYNRLFTMQN 495 (1139)
Q Consensus 420 DEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~ 495 (1139)
|||||+||+++++.+.+.++++.+++|+|+||||++.++.||+|++|++|++++.|+|++++++++.|++++..+.
T Consensus 476 DEpts~LD~~~~~~i~~~l~~~~~~~tii~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~y~~l~~~~~ 551 (569)
T PRK10789 476 DDALSAVDGRTEHQILHNLRQWGEGRTVIISAHRLSALTEASEILVMQHGHIAQRGNHDQLAQQSGWYRDMYRYQQ 551 (569)
T ss_pred ECccccCCHHHHHHHHHHHHHHhCCCEEEEEecchhHHHcCCEEEEEeCCEEEEecCHHHHHHcCChHHHHHHHhh
Confidence 9999999999999999999988789999999999999999999999999999999999999999999999987654
No 55
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=1.1e-73 Score=705.41 Aligned_cols=470 Identities=33% Similarity=0.552 Sum_probs=437.3
Q ss_pred HcCCcccccccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 21 IGGEVGAFDTDLSTGKVITGVSSHMSVIRDAIGEKLGHFLSSFATFFSGVLIAVICCWEVSLLIFLVVPMILVIGATYTK 100 (1139)
Q Consensus 21 l~~~~~~f~~~~~~G~l~~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~l~~l~~~~~~~~~~~~~~~ 100 (1139)
++.|.++|++. +.|++++|+++|++.+++++...+..++.++..+++.++++++++|.+++++++++|+++++..++.+
T Consensus 98 ~~~~~~~~~~~-~~g~~~~~l~~di~~i~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~l~~i~l~~~~l~~~~~~~~~~ 176 (571)
T TIGR02203 98 LGLPVSFFDRQ-PTGTLLSRITFDSEQVASAATDAFIVLVRETLTVIGLFIVLLYYSWQLTLIVVVMLPVLSILMRRVSK 176 (571)
T ss_pred HcCCHHHhCCC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78899999986 89999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 101 RMNAVSATKLLYLSEATSMIEQTISQIKTVFAFVGERSEIKSFSDCMDKQIIISRGEALIKGVGLGMFQSVTFCCWALII 180 (1139)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (1139)
+.++..++.++..++..+.+.|.++|+++||.++.++.+.++|++..++..+...+.....+....+..++..+..++++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (571)
T TIGR02203 177 RLRRISKEIQNSMGQVTTVAEETLQGYRVVKLFGGQAYETRRFDAVSNRNRRLAMKMTSAGSISSPITQLIASLALAVVL 256 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998888888888888888888878888889
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccCCCCccccCCCccEEEE
Q 048639 181 WVGAVVVTAKRSTGGEVLAAVMSILFGAIALTYAAPDMQVFNQAKAAGFEIFQVIQRKPRISYSSKGKELEKIDGNIDIR 260 (1139)
Q Consensus 181 ~~g~~~v~~~~l~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~~~~~~~~~~i~~~ 260 (1139)
++|++++.+|.+|+|.++++..++.....|+..+...+..++.++.+.+|+.++++.+++..... ....+..+.|+++
T Consensus 257 ~~g~~~~~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~--~~~~~~~~~i~~~ 334 (571)
T TIGR02203 257 FIALFQAQAGSLTAGDFTAFITAMIALIRPLKSLTNVNAPMQRGLAAAESLFTLLDSPPEKDTGT--RAIERARGDVEFR 334 (571)
T ss_pred HHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCC--CCCCCCCCeEEEE
Confidence 99999999999999999999999999999999999999999999999999999998655432111 1112234579999
Q ss_pred eEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcceEEEec
Q 048639 261 DVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNIGAVSQ 340 (1139)
Q Consensus 261 ~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q 340 (1139)
||+|+|++. ++++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.+||+++++++.+++|++|+||||
T Consensus 335 ~v~f~y~~~-~~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~~G~I~i~g~~i~~~~~~~~~~~i~~v~Q 413 (571)
T TIGR02203 335 NVTFRYPGR-DRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSGQILLDGHDLADYTLASLRRQVALVSQ 413 (571)
T ss_pred EEEEEcCCC-CCccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEeHHhcCHHHHHhhceEEcc
Confidence 999999754 4579999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccHHHHHhcCCC-CCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHccCCCEEEE
Q 048639 341 EPSLFTGSLMDNIKVGNM-DADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVKNPPILLL 419 (1139)
Q Consensus 341 ~~~l~~~ti~~ni~~g~~-~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~~~~illl 419 (1139)
+|++|++|++|||.++++ +.++++++++++.+++++++.++|+|+||.+|++|.+|||||||||+||||++++|+|+||
T Consensus 414 ~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~g~~LSgGqrQRiaLARall~~~~illL 493 (571)
T TIGR02203 414 DVVLFNDTIANNIAYGRTEQADRAEIERALAAAYAQDFVDKLPLGLDTPIGENGVLLSGGQRQRLAIARALLKDAPILIL 493 (571)
T ss_pred CcccccccHHHHHhcCCCCCCCHHHHHHHHHHcChHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 999999999999999986 7899999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhccCEEEEEeCcEEEEecChhhhhccchHHHHHHhhc
Q 048639 420 DEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVNADMIAVVEDGQVTETGTHHSLLQTSDFYNRLFTMQ 494 (1139)
Q Consensus 420 DEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~ 494 (1139)
|||||+||+++++.+.+.|.+..+++|+|+||||++.+..||+|++|++|++++.|+|+++++.++.|++++..+
T Consensus 494 DEpts~LD~~~~~~i~~~L~~~~~~~tiIiitH~~~~~~~~D~ii~l~~g~i~~~g~~~~l~~~~~~~~~~~~~~ 568 (571)
T TIGR02203 494 DEATSALDNESERLVQAALERLMQGRTTLVIAHRLSTIEKADRIVVMDDGRIVERGTHNELLARNGLYAQLHNMQ 568 (571)
T ss_pred eCccccCCHHHHHHHHHHHHHHhCCCEEEEEehhhHHHHhCCEEEEEeCCEEEeeCCHHHHHHcCCHHHHHHHHh
Confidence 999999999999999999998888999999999999999999999999999999999999998888999887643
No 56
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=1.8e-73 Score=703.03 Aligned_cols=472 Identities=30% Similarity=0.446 Sum_probs=430.1
Q ss_pred HcCCcccccccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 21 IGGEVGAFDTDLSTGKVITGVSSHMSVIRDAIGEKLGHFLSSFATFFSGVLIAVICCWEVSLLIFLVVPMILVIGATYTK 100 (1139)
Q Consensus 21 l~~~~~~f~~~~~~G~l~~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~l~~l~~~~~~~~~~~~~~~ 100 (1139)
++.|..+|++. ++|++++|+++|++.+.+.+...+..++..++.+++.++++++++|.+++++++++|++.++..++.+
T Consensus 100 ~~~~~~~~~~~-~~g~~~~~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~~l~~~i~~~~~~ 178 (588)
T PRK13657 100 IQLPLAWHSQR-GSGRALHTLLRGTDALFGLWLEFMREHLATLVALVVLLPLALFMNWRLSLVLVVLGIVYTLITTLVMR 178 (588)
T ss_pred HhCCHHHHCcC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77899999986 89999999999999999888888888888888888888888999999999999988998888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 101 RMNAVSATKLLYLSEATSMIEQTISQIKTVFAFVGERSEIKSFSDCMDKQIIISRGEALIKGVGLGMFQSVTFCCWALII 180 (1139)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (1139)
+.++..++.++..++..+.+.|.++|+++||.|+.++.+.+++.+..++..+...+.....+....+..++..+..++++
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (588)
T PRK13657 179 KTKDGQAAVEEHYHDLFAHVSDAIGNVSVVQSYNRIEAETQALRDIADNLLAAQMPVLSWWALASVLNRAASTITMLAIL 258 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998888888777777777777777777777888
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccCCCCccccCCCccEEEE
Q 048639 181 WVGAVVVTAKRSTGGEVLAAVMSILFGAIALTYAAPDMQVFNQAKAAGFEIFQVIQRKPRISYSSKGKELEKIDGNIDIR 260 (1139)
Q Consensus 181 ~~g~~~v~~~~l~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~~~~~~~~~~i~~~ 260 (1139)
++|++++.+|.+|+|.+++++.++.....|+..+...+..+..+..+.+|+.++++.+++..............+.|+++
T Consensus 259 ~~g~~~v~~g~lt~g~~~a~~~l~~~~~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~I~~~ 338 (588)
T PRK13657 259 VLGAALVQKGQLRVGEVVAFVGFATLLIGRLDQVVAFINQVFMAAPKLEEFFEVEDAVPDVRDPPGAIDLGRVKGAVEFD 338 (588)
T ss_pred HHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCCCCcCCCCCeEEEE
Confidence 99999999999999999999988888889999999999999999999999999987654321111111112233569999
Q ss_pred eEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcceEEEec
Q 048639 261 DVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNIGAVSQ 340 (1139)
Q Consensus 261 ~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q 340 (1139)
||+|+|+++ +++|+|+||+++|||+++|+|+||||||||+++|+|+++|++|+|.+||+++.+++.+++|++|+||||
T Consensus 339 ~vsf~y~~~--~~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q 416 (588)
T PRK13657 339 DVSFSYDNS--RQGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQSGRILIDGTDIRTVTRASLRRNIAVVFQ 416 (588)
T ss_pred EEEEEeCCC--CceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEEhhhCCHHHHHhheEEEec
Confidence 999999742 469999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHccCCCEEEEe
Q 048639 341 EPSLFTGSLMDNIKVGNMDADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVKNPPILLLD 420 (1139)
Q Consensus 341 ~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~~~~illlD 420 (1139)
+|++|++|++|||.+++|+.++++++++++.+++++++.++|+|+||.+|++|.+||||||||++|||||+++|+|+|||
T Consensus 417 ~~~lf~~Ti~~Ni~~~~~~~~d~~i~~al~~~~l~~~i~~lp~gldt~i~~~g~~LSgGq~QRialARall~~~~iliLD 496 (588)
T PRK13657 417 DAGLFNRSIEDNIRVGRPDATDEEMRAAAERAQAHDFIERKPDGYDTVVGERGRQLSGGERQRLAIARALLKDPPILILD 496 (588)
T ss_pred CcccccccHHHHHhcCCCCCCHHHHHHHHHHhCHHHHHHhCcccccchhcCCCCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 99999999999999999888999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhccCEEEEEeCcEEEEecChhhhhccchHHHHHHhhcc
Q 048639 421 EATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVNADMIAVVEDGQVTETGTHHSLLQTSDFYNRLFTMQN 495 (1139)
Q Consensus 421 Epts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~ 495 (1139)
||||+||+++++.+.+.+.+..+++|+|+||||++.++.||+|++|++|++++.|+|+++++..+.|++++..+.
T Consensus 497 Epts~LD~~t~~~i~~~l~~~~~~~tvIiitHr~~~~~~~D~ii~l~~G~i~~~g~~~~l~~~~~~y~~l~~~~~ 571 (588)
T PRK13657 497 EATSALDVETEAKVKAALDELMKGRTTFIIAHRLSTVRNADRILVFDNGRVVESGSFDELVARGGRFAALLRAQG 571 (588)
T ss_pred CCccCCCHHHHHHHHHHHHHHhcCCEEEEEEecHHHHHhCCEEEEEECCEEEEeCCHHHHHHCCChHHHHHHHhh
Confidence 999999999999999999988789999999999999999999999999999999999999988899999987553
No 57
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=3.5e-73 Score=696.34 Aligned_cols=472 Identities=28% Similarity=0.426 Sum_probs=430.8
Q ss_pred HcCCcccccccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 21 IGGEVGAFDTDLSTGKVITGVSSHMSVIRDAIGEKLGHFLSSFATFFSGVLIAVICCWEVSLLIFLVVPMILVIGATYTK 100 (1139)
Q Consensus 21 l~~~~~~f~~~~~~G~l~~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~l~~l~~~~~~~~~~~~~~~ 100 (1139)
+++|++||+++ ++|++++|+++|++.+++.+...+..++..++++++.++++++++|.+++++++++|+++++..++.+
T Consensus 100 ~~l~~~~~~~~-~~g~~~s~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~~~~~~~~~~~~ 178 (585)
T TIGR01192 100 ISMPLSWHQQR-GTSNALHTLLRATETLFGLWLEFMRQHLATFVALFLLIPTAFAMDWRLSIVLMVLGILYILIAKLVMQ 178 (585)
T ss_pred HcCCHHHhCCC-ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78999999987 89999999999999999999888888888888888888889999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 101 RMNAVSATKLLYLSEATSMIEQTISQIKTVFAFVGERSEIKSFSDCMDKQIIISRGEALIKGVGLGMFQSVTFCCWALII 180 (1139)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (1139)
+.++..++.++..++..+.+.|.++|+++||+|+.|+.+.+++.+..++..+...+..+..++...+..++..+..++++
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 258 (585)
T TIGR01192 179 RTKNGQAAVEHHYHNVFKHVSDSISNVSVVHSYNRIEAETSALKQFTNNLLSAQYPVLDWWALASGLNRMASTISMMCIL 258 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998998899999999999999999999999999999999999999988888777777777777777677777777888
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccCCCCccccCCCccEEEE
Q 048639 181 WVGAVVVTAKRSTGGEVLAAVMSILFGAIALTYAAPDMQVFNQAKAAGFEIFQVIQRKPRISYSSKGKELEKIDGNIDIR 260 (1139)
Q Consensus 181 ~~g~~~v~~~~l~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~~~~~~~~~~i~~~ 260 (1139)
++|++++.+|.+++|.+++++.+......|+..+...+..+..+..+.+|+.++++.+++..........+...+.++++
T Consensus 259 ~~g~~~v~~g~it~g~l~a~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 338 (585)
T TIGR01192 259 VIGTVLVIKGELSVGEVIAFIGFANLLIGRLDQMSGFITQIFEARAKLEDFFDLEDSVFQREEPADAPELPNVKGAVEFR 338 (585)
T ss_pred HHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCccCCCCCCCCCeEEEE
Confidence 99999999999999999999988888889999999999999999999999999987654321111111112233569999
Q ss_pred eEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcceEEEec
Q 048639 261 DVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNIGAVSQ 340 (1139)
Q Consensus 261 ~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q 340 (1139)
||+|+|++. +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.+||.++.+++.+++|++++||||
T Consensus 339 ~v~~~y~~~--~~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~q 416 (585)
T TIGR01192 339 HITFEFANS--SQGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDPTVGQILIDGIDINTVTRESLRKSIATVFQ 416 (585)
T ss_pred EEEEECCCC--CccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCCCCCEEEECCEEhhhCCHHHHHhheEEEcc
Confidence 999999742 468999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHccCCCEEEEe
Q 048639 341 EPSLFTGSLMDNIKVGNMDADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVKNPPILLLD 420 (1139)
Q Consensus 341 ~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~~~~illlD 420 (1139)
+|++|++|++|||.++.++.++++++++++.+++++++.++|+|++|.+|++|.+||||||||++|||||+++|+++|||
T Consensus 417 ~~~lf~~ti~~Ni~~~~~~~~~~~~~~a~~~~~~~~~i~~l~~g~~t~~~~~~~~LSgGq~qrl~lARall~~p~ililD 496 (585)
T TIGR01192 417 DAGLFNRSIRENIRLGREGATDEEVYEAAKAAAAHDFILKRSNGYDTLVGERGNRLSGGERQRLAIARAILKNAPILVLD 496 (585)
T ss_pred CCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhccccccchhcCCCCCCCHHHHHHHHHHHHHhcCCCEEEEE
Confidence 99999999999999998888999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhccCEEEEEeCcEEEEecChhhhhccchHHHHHHhhcc
Q 048639 421 EATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVNADMIAVVEDGQVTETGTHHSLLQTSDFYNRLFTMQN 495 (1139)
Q Consensus 421 Epts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~ 495 (1139)
||||+||+++++.+.+.+.+..+++|+|+||||++.+..||+|++|++|++++.|+|++++++++.|++++..+.
T Consensus 497 Epts~LD~~~~~~i~~~l~~~~~~~tvI~isH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~y~~l~~~~~ 571 (585)
T TIGR01192 497 EATSALDVETEARVKNAIDALRKNRTTFIIAHRLSTVRNADLVLFLDQGRLIEKGSFQELIQKDGRFYKLLRRSG 571 (585)
T ss_pred CCccCCCHHHHHHHHHHHHHHhCCCEEEEEEcChHHHHcCCEEEEEECCEEEEECCHHHHHHCCChHHHHHHhCc
Confidence 999999999999999999988789999999999999999999999999999999999999999999999997664
No 58
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.2e-75 Score=712.65 Aligned_cols=499 Identities=27% Similarity=0.415 Sum_probs=369.7
Q ss_pred ccEEEEeEEEECCCCC-CCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCC---------
Q 048639 255 GNIDIRDVCFAYPSRP-DQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIK--------- 324 (1139)
Q Consensus 255 ~~i~~~~v~~~y~~~~-~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~--------- 324 (1139)
..|+++|++++|+... +.++|+||||++++||++||+||||||||||+++|+|+++|++|+|.++|.++.
T Consensus 11 ~~l~v~~l~~~y~~~~~~~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~~G~i~~~g~~~~~~~~~~~~~ 90 (623)
T PRK10261 11 DVLAVENLNIAFMQEQQKIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQAGGLVQCDKMLLRRRSRQVIEL 90 (623)
T ss_pred ceEEEeceEEEecCCCCceeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCeEEEECCEEecccccccccc
Confidence 3699999999996321 246999999999999999999999999999999999999999999999987542
Q ss_pred -CCCHH---HHh-cceEEEecCC--CCCc-ccHHHHHhcCCC---CCCHHHHHHHHHHhcHHHHHHhCCCCCC---cccc
Q 048639 325 -DLDLK---SLR-KNIGAVSQEP--SLFT-GSLMDNIKVGNM---DADDEQIYNASMMANAHSFISQLPDQYS---TELG 390 (1139)
Q Consensus 325 -~~~~~---~~~-~~i~~v~Q~~--~l~~-~ti~~ni~~g~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~---t~i~ 390 (1139)
..+.. .+| ++||||+|+| .+++ .||+||+.++.. .....+.. ..+.+.++.+ |+. ....
T Consensus 91 ~~~~~~~~~~~r~~~ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~~l~~~--gL~~~~~~~~ 163 (623)
T PRK10261 91 SEQSAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESIRLHQGASREEAM-----VEAKRMLDQV--RIPEAQTILS 163 (623)
T ss_pred ccCCHHHHHHHhCCCEEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHC--CCCChhhHHh
Confidence 12222 233 5799999998 5666 599999987521 11222211 1223445554 332 3456
Q ss_pred ccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-C-CCeEEEEecCccchhc-cCEEEEEe
Q 048639 391 QRGVQLSGGQKQRIAIARAIVKNPPILLLDEATSALDSESEKLVQEALERAM-Q-GRTVILIAHRMSTIVN-ADMIAVVE 467 (1139)
Q Consensus 391 ~~g~~LSgGqkqRi~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~-~-~~tvi~itH~~~~~~~-~d~i~~l~ 467 (1139)
....+|||||||||+|||||+.+|++|||||||++||+.+++.+.+.++++. + |+|+|+|||+++.+.. ||+|++|+
T Consensus 164 ~~~~~LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~ll~~l~~~~g~tvi~itHdl~~~~~~adri~vl~ 243 (623)
T PRK10261 164 RYPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEMSMGVIFITHDMGVVAEIADRVLVMY 243 (623)
T ss_pred CCCccCCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEee
Confidence 7888999999999999999999999999999999999999999999999875 3 8999999999999876 99999999
Q ss_pred CcEEEEecChhhhhccch-HHH-HHHhhccCCCCCCcCcccccccccccchhhhhhhcccCchhhhhhcccccchhhhcc
Q 048639 468 DGQVTETGTHHSLLQTSD-FYN-RLFTMQNLRPIDDSRTKASTVESTSTEQQISVVEQLEEPEESKRELSASTGQEEVKG 545 (1139)
Q Consensus 468 ~G~i~~~g~~~~l~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (1139)
+|++++.|+++++..... .|. .+...
T Consensus 244 ~G~i~~~g~~~~~~~~~~~~~~~~l~~~---------------------------------------------------- 271 (623)
T PRK10261 244 QGEAVETGSVEQIFHAPQHPYTRALLAA---------------------------------------------------- 271 (623)
T ss_pred CCeecccCCHHHhhcCCCChhhhhhhhc----------------------------------------------------
Confidence 999999999887643110 000 00000
Q ss_pred cccchhhHHHHhhchhhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 546 KRTTIFFRIWFCLNERELLRLVVGTVAAAFSGISKPLFGFFIITIGVAYYDPQAKQEVGWYSLAFSLVGLFSLFTHTLQH 625 (1139)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (1139)
. | ..
T Consensus 272 -------------~---------------------~----------------~~-------------------------- 275 (623)
T PRK10261 272 -------------V---------------------P----------------QL-------------------------- 275 (623)
T ss_pred -------------c---------------------C----------------cc--------------------------
Confidence 0 0 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCcccccCCCChhHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 048639 626 YFFGVVGEKAMTNLRRTLYTGVLRNEIAWFEKPQNDAGSLTSRIVSDTSMVKAIISDRMSVIVQCISSILIATIVSLVVD 705 (1139)
Q Consensus 626 ~~~~~~~~~~~~~l~~~l~~~ll~~~~~ff~~~~~~~G~i~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 705 (1139)
+. +..+ ..+ .-+. ..
T Consensus 276 --------------~~-~~~~--~~~-~~~~--~~--------------------------------------------- 290 (623)
T PRK10261 276 --------------GA-MKGL--DYP-RRFP--LI--------------------------------------------- 290 (623)
T ss_pred --------------cc-cccc--cCC-cccc--cc---------------------------------------------
Confidence 00 0000 000 0000 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHHHHHHhhcchHHHHhhcchHHHHHHHHHHHHHHHHHHHHH
Q 048639 706 WRMALVAWAVMPCHFIGGLIQAKSAQGFSGDSAAAHTEFISLTSESASNIRTVASFCHEENILQKAKISLEKTKRSSRKE 785 (1139)
Q Consensus 706 ~~l~lv~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~ 785 (1139)
.
T Consensus 291 ----------------------------~--------------------------------------------------- 291 (623)
T PRK10261 291 ----------------------------S--------------------------------------------------- 291 (623)
T ss_pred ----------------------------c---------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 048639 786 SIKYGVIQGFSLCLWNIAHAVALWYTAVLIDKKQATFRDGIRAYQIFSLTVPSITELWTLIPTVISAITVLAPAFEILDR 865 (1139)
Q Consensus 786 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~ 865 (1139)
...
T Consensus 292 -----------------------------------------------------------------------------~~~ 294 (623)
T PRK10261 292 -----------------------------------------------------------------------------LEH 294 (623)
T ss_pred -----------------------------------------------------------------------------ccc
Confidence 000
Q ss_pred CCCCCCCCCCCCCCCCccccEEEEeEEEECCCCC--------CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcc
Q 048639 866 KTEIEPDAPESSESGRIKGRIEFQNIKFNYPSRP--------EVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRF 937 (1139)
Q Consensus 866 ~~~~~~~~~~~~~~~~~~g~I~~~nvsf~Y~~~~--------~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl 937 (1139)
+....+....... .....-|+++||+++|+.+. ..++|+||||+|++||++||+|+||||||||+++|.|+
T Consensus 295 ~~~~~~~~~~~~~-~~~~~~L~~~~l~~~y~~~~~~~~~~~~~~~~l~~vs~~i~~Ge~~~lvG~nGsGKSTLlk~i~Gl 373 (623)
T PRK10261 295 PAKQEPPIEQDTV-VDGEPILQVRNLVTRFPLRSGLLNRVTREVHAVEKVSFDLWPGETLSLVGESGSGKSTTGRALLRL 373 (623)
T ss_pred ccccCcccccccc-cCCCceEEEeeeEEEEcCCCccccccCCceEEEeeeEeEEcCCCEEEEECCCCCCHHHHHHHHHcC
Confidence 0000000000000 00012499999999996311 23699999999999999999999999999999999999
Q ss_pred ccCCccEEEECCcccCCCChH---HHhhhceEEcccc--cccc-ccHHHHhccCC---C----cCCHHHHHHHHHHcCch
Q 048639 938 YDPNEGIILIDGKGIKEYNLR---RLRSQIGLVQQEP--LLFS-CSIRNNICYGN---E----AASEAEIVEVSKKANIH 1004 (1139)
Q Consensus 938 ~~p~~G~I~idG~di~~~~l~---~lR~~i~~V~Qdp--~LF~-gTIreNL~~~~---~----~~sd~ei~~al~~~~l~ 1004 (1139)
.+|++|+|.++|.++..++.. .+|++|+||||+| .++. .|+++|+.++. . ...++++.++++.+++.
T Consensus 374 ~~p~~G~I~~~g~~i~~~~~~~~~~~~~~i~~v~Q~~~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~gL~ 453 (623)
T PRK10261 374 VESQGGEIIFNGQRIDTLSPGKLQALRRDIQFIFQDPYASLDPRQTVGDSIMEPLRVHGLLPGKAAAARVAWLLERVGLL 453 (623)
T ss_pred CCCCCcEEEECCEECCcCCHHHHHHhcCCeEEEecCchhhcCCCCCHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCC
Confidence 999999999999999877643 4677899999998 3664 59999986421 1 11124577788888884
Q ss_pred -HHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCC
Q 048639 1005 -DFISSLPDGYDTVVGEKGCQLSGGQKQRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASR 1083 (1139)
Q Consensus 1005 -~~i~~lp~gldt~v~e~G~~LSgGQrQrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~ 1083 (1139)
+...+.| ..||||||||++|||||+.+|+|||||||||+||+.+.+.|.+.|++... ..+
T Consensus 454 ~~~~~~~~-----------~~LSgGqrQRv~iAraL~~~p~llllDEPts~LD~~~~~~i~~ll~~l~~--------~~g 514 (623)
T PRK10261 454 PEHAWRYP-----------HEFSGGQRQRICIARALALNPKVIIADEAVSALDVSIRGQIINLLLDLQR--------DFG 514 (623)
T ss_pred HHHhhCCc-----------ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH--------hcC
Confidence 3433332 46999999999999999999999999999999999999999999987641 224
Q ss_pred eEEEEEecCchhhhc-CCEEEEEeCCEEEEecChhHHhhccCChHHH
Q 048639 1084 TTQITVAHRLATVIN-SDVIVVMDKGEVVEMGSHSTLVAESQGVYSR 1129 (1139)
Q Consensus 1084 tTvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eLl~~~~g~f~~ 1129 (1139)
+|+|+|||+++.+.. ||||+||++|+|+|.|+++++..++...|.+
T Consensus 515 ~tvi~isHdl~~v~~~~dri~vl~~G~iv~~g~~~~i~~~p~~~~~~ 561 (623)
T PRK10261 515 IAYLFISHDMAVVERISHRVAVMYLGQIVEIGPRRAVFENPQHPYTR 561 (623)
T ss_pred CEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhcCCCCHHHH
Confidence 569999999999986 9999999999999999999998766666654
No 59
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-75 Score=704.60 Aligned_cols=460 Identities=24% Similarity=0.406 Sum_probs=359.7
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCC--CccEEEECCccCCCCCHHH-Hh
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDP--SNGDILIDSLNIKDLDLKS-LR 332 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~--~~G~i~~~g~~~~~~~~~~-~~ 332 (1139)
.|+++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++| ++|+|.++|.++...+... .+
T Consensus 5 ~l~~~nl~~~~~~---~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~ 81 (506)
T PRK13549 5 LLEMKNITKTFGG---VKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQASNIRDTER 81 (506)
T ss_pred eEEEeeeEEEeCC---eEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHH
Confidence 4899999999963 4699999999999999999999999999999999999996 8999999999997766543 46
Q ss_pred cceEEEecCCCCCcc-cHHHHHhcCCCC-----CCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHH
Q 048639 333 KNIGAVSQEPSLFTG-SLMDNIKVGNMD-----ADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAI 406 (1139)
Q Consensus 333 ~~i~~v~Q~~~l~~~-ti~~ni~~g~~~-----~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~l 406 (1139)
+.++||+|++.++.. |++||+.++... ...++.. ..+.+.++.+ |++........+||||||||++|
T Consensus 82 ~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LSgGqkqrv~l 154 (506)
T PRK13549 82 AGIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMY-----LRAQKLLAQL--KLDINPATPVGNLGLGQQQLVEI 154 (506)
T ss_pred CCeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHH-----HHHHHHHHHc--CCCCCcccchhhCCHHHHHHHHH
Confidence 789999999988865 999999986421 1112211 1233455665 45555667788999999999999
Q ss_pred HHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhccc
Q 048639 407 ARAIVKNPPILLLDEATSALDSESEKLVQEALERAM-QGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQTS 484 (1139)
Q Consensus 407 ARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~ 484 (1139)
||||+.+|++||||||||+||+.+...+.+.|.++. +++|+|++||+++.+.. ||+|++|++|+++..|+.+++....
T Consensus 155 a~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~ 234 (506)
T PRK13549 155 AKALNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLNEVKAISDTICVIRDGRHIGTRPAAGMTEDD 234 (506)
T ss_pred HHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHHhcCEEEEEECCEEeeecccccCCHHH
Confidence 999999999999999999999999999999998864 47899999999999876 9999999999999877654321000
Q ss_pred hHHHHHHhhccCCCCCCcCcccccccccccchhhhhhhcccCchhhhhhcccccchhhhcccccchhhHHHHhhchhhHH
Q 048639 485 DFYNRLFTMQNLRPIDDSRTKASTVESTSTEQQISVVEQLEEPEESKRELSASTGQEEVKGKRTTIFFRIWFCLNERELL 564 (1139)
Q Consensus 485 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 564 (1139)
. .
T Consensus 235 ---------------------------------------------------------------------~-~-------- 236 (506)
T PRK13549 235 ---------------------------------------------------------------------I-I-------- 236 (506)
T ss_pred ---------------------------------------------------------------------H-H--------
Confidence 0 0
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 565 RLVVGTVAAAFSGISKPLFGFFIITIGVAYYDPQAKQEVGWYSLAFSLVGLFSLFTHTLQHYFFGVVGEKAMTNLRRTLY 644 (1139)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 644 (1139)
.
T Consensus 237 ---------------------------~---------------------------------------------------- 237 (506)
T PRK13549 237 ---------------------------T---------------------------------------------------- 237 (506)
T ss_pred ---------------------------H----------------------------------------------------
Confidence 0
Q ss_pred HHHHcCCCcccccCCCChhHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Q 048639 645 TGVLRNEIAWFEKPQNDAGSLTSRIVSDTSMVKAIISDRMSVIVQCISSILIATIVSLVVDWRMALVAWAVMPCHFIGGL 724 (1139)
Q Consensus 645 ~~ll~~~~~ff~~~~~~~G~i~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~~~~~p~~~~~~~ 724 (1139)
.. +. .. .
T Consensus 238 -~~-------~~--~~-~-------------------------------------------------------------- 244 (506)
T PRK13549 238 -MM-------VG--RE-L-------------------------------------------------------------- 244 (506)
T ss_pred -Hh-------hC--cC-c--------------------------------------------------------------
Confidence 00 00 00 0
Q ss_pred HHHHhhhchhhhHHHHHHHHHHHHHHhhcchHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 725 IQAKSAQGFSGDSAAAHTEFISLTSESASNIRTVASFCHEENILQKAKISLEKTKRSSRKESIKYGVIQGFSLCLWNIAH 804 (1139)
Q Consensus 725 ~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 804 (1139)
T Consensus 245 -------------------------------------------------------------------------------- 244 (506)
T PRK13549 245 -------------------------------------------------------------------------------- 244 (506)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCccc
Q 048639 805 AVALWYTAVLIDKKQATFRDGIRAYQIFSLTVPSITELWTLIPTVISAITVLAPAFEILDRKTEIEPDAPESSESGRIKG 884 (1139)
Q Consensus 805 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~g 884 (1139)
. .. .+..... +. ..
T Consensus 245 ----------------~---------------------------------------~~---~~~~~~~------~~--~~ 258 (506)
T PRK13549 245 ----------------T---------------------------------------AL---YPREPHT------IG--EV 258 (506)
T ss_pred ----------------c---------------------------------------cc---ccccccC------CC--Cc
Confidence 0 00 0000000 00 12
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccc-CCccEEEECCcccCCCCh-HHHhh
Q 048639 885 RIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYD-PNEGIILIDGKGIKEYNL-RRLRS 962 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~-p~~G~I~idG~di~~~~l-~~lR~ 962 (1139)
.|+++||+++|+.+.+.++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.++|.++...+. +.+|+
T Consensus 259 ~l~~~~l~~~~~~~~~~~vl~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~~~~~G~i~~~g~~~~~~~~~~~~~~ 338 (506)
T PRK13549 259 ILEVRNLTAWDPVNPHIKRVDDVSFSLRRGEILGIAGLVGAGRTELVQCLFGAYPGRWEGEIFIDGKPVKIRNPQQAIAQ 338 (506)
T ss_pred eEEEecCccccccccccccccceeeEEcCCcEEEEeCCCCCCHHHHHHHHhCCCCCCCCcEEEECCEECCCCCHHHHHHC
Confidence 4899999999953223469999999999999999999999999999999999998 599999999999875543 34677
Q ss_pred hceEEcccc---ccc-cccHHHHhccCCC-c------CC----HHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCCh
Q 048639 963 QIGLVQQEP---LLF-SCSIRNNICYGNE-A------AS----EAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSG 1027 (1139)
Q Consensus 963 ~i~~V~Qdp---~LF-~gTIreNL~~~~~-~------~s----d~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSg 1027 (1139)
+++||||+| .+| ..|+.+|+.++.. . .+ .+++.++++..++.+ +-.+.+ ...|||
T Consensus 339 ~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~------~~~~~~----~~~LSg 408 (506)
T PRK13549 339 GIAMVPEDRKRDGIVPVMGVGKNITLAALDRFTGGSRIDDAAELKTILESIQRLKVKT------ASPELA----IARLSG 408 (506)
T ss_pred CCEEeCcchhhCCCcCCCCHHHHhhhhhhhhhccCcccChHHHHHHHHHHHHhcCccC------CCcccc----cccCCH
Confidence 899999997 355 4699999976420 0 11 134556666666531 112233 357999
Q ss_pred HHHHHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEe
Q 048639 1028 GQKQRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMD 1106 (1139)
Q Consensus 1028 GQrQrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~ 1106 (1139)
|||||++|||||+.+|+||||||||++||+.+.+.+.+.|+++. ..++|||+|||+++.+.. |||+++|+
T Consensus 409 G~kqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~---------~~g~tvi~~sHd~~~~~~~~d~v~~l~ 479 (506)
T PRK13549 409 GNQQKAVLAKCLLLNPKILILDEPTRGIDVGAKYEIYKLINQLV---------QQGVAIIVISSELPEVLGLSDRVLVMH 479 (506)
T ss_pred HHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHH---------HCCCEEEEECCCHHHHHHhCCEEEEEE
Confidence 99999999999999999999999999999999999999999764 334569999999999876 99999999
Q ss_pred CCEEEEecChhHHh
Q 048639 1107 KGEVVEMGSHSTLV 1120 (1139)
Q Consensus 1107 ~G~ive~G~~~eLl 1120 (1139)
+|+++..|+++++.
T Consensus 480 ~G~i~~~~~~~~~~ 493 (506)
T PRK13549 480 EGKLKGDLINHNLT 493 (506)
T ss_pred CCEEEEEeccccCC
Confidence 99999999998874
No 60
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=2.2e-73 Score=694.58 Aligned_cols=430 Identities=23% Similarity=0.363 Sum_probs=389.3
Q ss_pred HcCCcccccccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHH-
Q 048639 21 IGGEVGAFDTDLSTGKVITGVSSHMSVIRDAIGEKLGHFLSSFATFFSGVLIAVICCWEVSLLIFLVVPMILVIGATYT- 99 (1139)
Q Consensus 21 l~~~~~~f~~~~~~G~l~~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~l~~l~~~~~~~~~~~~~~- 99 (1139)
+++|.+||++. ++|++++|+++|++.+++.+...+..++..+..+++.++++++++|.+++++++.+|++.++...+.
T Consensus 97 l~~~~~~~~~~-~~g~~~~~l~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~~~~~~~~~~~~~~~ 175 (529)
T TIGR02868 97 ARLALAGRRRF-QTGDLLGRLGADVDALQDLYVRVIVPLVVALVVGSAAVAAIALLSVPAALVLAAGLLLAGFVAPLVSL 175 (529)
T ss_pred hccCccccccC-ChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999987 8999999999999999999999889999999888999999999999999998888787766554444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 100 KRMNAVSATKLLYLSEATSMIEQTISQIKTVFAFVGERSEIKSFSDCMDKQIIISRGEALIKGVGLGMFQSVTFCCWALI 179 (1139)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (1139)
+..++..++.++..++..+.+.|.++|+++||+|++|+.+.++|++..++..+...+..+..+...++..++..+..+++
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (529)
T TIGR02868 176 RAARAAEVALARLRSQLYQQLTDALDGAADLVAYGALDPALAQVEAADRELLAAERRAARATGLGAAAQLLAAGLAVLGA 255 (529)
T ss_pred HhcchHHHHHHHHHHHHHHHHHHHhccHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44456667778888999999999999999999999999999999999999999988888888888888878777888888
Q ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccCCC--CccccCCCccE
Q 048639 180 IWVGAVVVTAKRSTGGEVLAAVMSILFGAIALTYAAPDMQVFNQAKAAGFEIFQVIQRKPRISYSSK--GKELEKIDGNI 257 (1139)
Q Consensus 180 ~~~g~~~v~~~~l~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~--~~~~~~~~~~i 257 (1139)
+++|++++.+|.+++|.+++++.+......|+..+...+..++++..+.+|+.++++.+++...... .....+..+.|
T Consensus 256 ~~~g~~~~~~g~~t~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~~I 335 (529)
T TIGR02868 256 LWAGGPAVADGTLAPATLAVLVLLPLAAFEAFAPLPAAAQALTRVRAAAERIEEVTGAKGPRPEGVVPAAGALGLGKPTL 335 (529)
T ss_pred HHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCCcccCCCCceE
Confidence 8999999999999999999999888888899999999999999999999999999986654321111 01111123569
Q ss_pred EEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcceEE
Q 048639 258 DIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNIGA 337 (1139)
Q Consensus 258 ~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 337 (1139)
+++||+|+|+++ +++|+|+||++++||++|||||||||||||+++|+|+|+|++|+|.+||+|++++ .+++|++|+|
T Consensus 336 ~~~~vsf~Y~~~--~~vL~~isl~i~~G~~vaIvG~SGsGKSTLl~lL~g~~~p~~G~I~i~g~~i~~~-~~~lr~~i~~ 412 (529)
T TIGR02868 336 ELRDLSFGYPGS--PPVLDGVSLDLPPGERVAILGPSGSGKSTLLMLLTGLLDPLQGEVTLDGVSVSSL-QDELRRRISV 412 (529)
T ss_pred EEEEEEEecCCC--CceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEhhhH-HHHHHhheEE
Confidence 999999999753 4699999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred EecCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHccCCCEE
Q 048639 338 VSQEPSLFTGSLMDNIKVGNMDADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVKNPPIL 417 (1139)
Q Consensus 338 v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~~~~il 417 (1139)
|||+|+||++||+|||.+|+|++++++++++++.+++++++.++|+|+||.+||+|.+||||||||||||||++++|+||
T Consensus 413 V~Q~~~lF~~TI~eNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGGQrQRiaiARall~~~~il 492 (529)
T TIGR02868 413 FAQDAHLFDTTVRDNLRLGRPDATDEELWAALERVGLADWLRSLPDGLDTVLGEGGARLSGGERQRLALARALLADAPIL 492 (529)
T ss_pred EccCcccccccHHHHHhccCCCCCHHHHHHHHHHcCCHHHHHhCcccccchhccccCcCCHHHHHHHHHHHHHhcCCCEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCc
Q 048639 418 LLDEATSALDSESEKLVQEALERAMQGRTVILIAHRM 454 (1139)
Q Consensus 418 llDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~ 454 (1139)
|||||||+||+++++.+.+.+.+..+++|+|+||||+
T Consensus 493 iLDE~TSaLD~~te~~I~~~l~~~~~~~TvIiItHrl 529 (529)
T TIGR02868 493 LLDEPTEHLDAGTESELLEDLLAALSGKTVVVITHHL 529 (529)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 9999999999999999999999888899999999995
No 61
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.3e-73 Score=633.50 Aligned_cols=457 Identities=25% Similarity=0.430 Sum_probs=401.4
Q ss_pred CCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 32 LSTGKVITGVSSHMSVIRDAIGEKLGHFLSSFATFFSGVLIAVICCWEVSLLIFL-VVPMILVIGATYTKRMNAVSATKL 110 (1139)
Q Consensus 32 ~~~G~l~~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~l~~l~-~~~~~~~~~~~~~~~~~~~~~~~~ 110 (1139)
+++||++||+..|++.+++.+...+.+++..+....+..+.+-+++|.+++.+.. .+.++++++..+.++-++..+...
T Consensus 112 ~r~gdLL~RLvaDVd~Ld~lyLRvi~P~~~a~~~~~~~~i~L~f~~~~~Alll~~~ll~~lli~P~~~~~~~~~~~~~l~ 191 (573)
T COG4987 112 YRSGDLLNRLVADVDALDNLYLRVIAPAVVALVLIAVVTIGLSFFSIPLALLLGLILLLLLLIIPTLFYRAGRKFGAHLA 191 (573)
T ss_pred cChHhHHHHHHhhHHHHhhHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHH
Confidence 5899999999999999999999999999998888877777777888888765544 344456778888888888888888
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHh
Q 048639 111 LYLSEATSMIEQTISQIKTVFAFVGERSEIKSFSDCMDKQIIISRGEALIKGVGLGMFQSVTFCCWA-LIIWVGAVVVTA 189 (1139)
Q Consensus 111 ~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~v~~ 189 (1139)
...+.+.+.+.|.++|....+.||.++.+.+.+.+.-..+.+...+...+..+...+..++..+..+ .++|.+ ..+-.
T Consensus 192 ~~r~~lr~~~td~v~G~~EL~~~g~~~~~~~~l~~~e~~~~~~q~k~~~~~~~~~a~~~l~~g~~v~~~l~w~a-~~~~~ 270 (573)
T COG4987 192 QGRAALRSQFTDWVQGQAELLIFGAEDAYRTALEATEASWLKAQRKQARFTGLSDAILLLIAGLLVIGLLLWMA-AQVGA 270 (573)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCcC
Confidence 9999999999999999999999999999999999999999999999999988888888777666655 334443 34455
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhccCCCCccCCCCccccCCCccEEEEeEEEECCC
Q 048639 190 KRSTGGEVLAAVMSILFGAIALTYAA-PDMQVFNQAKAAGFEIFQVIQRKPRISYSSKGKELEKIDGNIDIRDVCFAYPS 268 (1139)
Q Consensus 190 ~~l~~g~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~ 268 (1139)
|..+...+..+++.++....++..+. ..+....+...|+.|+.++++.+++...+. . +.+..+..++++||||+||+
T Consensus 271 G~~~~~~aa~~ll~~f~~~eaf~~L~~~A~~~lgq~~~Sa~Rl~~i~~q~~e~~~~~-~-~~~~~~~~l~~~~vsF~y~~ 348 (573)
T COG4987 271 GALAQPGAALALLVIFAALEAFEPLAPGAFQHLGQVIASARRLNDILDQKPEVTFPD-E-QTATTGQALELRNVSFTYPG 348 (573)
T ss_pred CCcchhHHHHHHHHHHHHHHHHhhhcchhHHHhhHHHHHHHHHhhhccCCcccCCCc-c-ccCCccceeeeccceeecCC
Confidence 66665444444444444445555555 556788899999999999999887764331 1 11112227999999999987
Q ss_pred CCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcceEEEecCCCCCccc
Q 048639 269 RPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNIGAVSQEPSLFTGS 348 (1139)
Q Consensus 269 ~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~t 348 (1139)
+ +.++|+|+||++++||++||+|+||||||||+++|.|.++|++|+|.++|.++..++.+.+|+.|++++|.++||++|
T Consensus 349 ~-~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~~~~G~i~~~g~~~~~l~~~~~~e~i~vl~Qr~hlF~~T 427 (573)
T COG4987 349 Q-QTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWDPQQGSITLNGVEIASLDEQALRETISVLTQRVHLFSGT 427 (573)
T ss_pred C-ccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccCCCCCeeeECCcChhhCChhhHHHHHhhhccchHHHHHH
Confidence 5 468999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCH
Q 048639 349 LMDNIKVGNMDADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVKNPPILLLDEATSALDS 428 (1139)
Q Consensus 349 i~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~~~~illlDEpts~LD~ 428 (1139)
+|||+.+++|+++||+++++++.+++++.++..|+|++|.+||.|..||||||||+||||+|++|++++||||||.+||+
T Consensus 428 lr~NL~lA~~~AsDEel~~aL~qvgL~~l~~~~p~gl~t~lge~G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~ 507 (573)
T COG4987 428 LRDNLRLANPDASDEELWAALQQVGLEKLLESAPDGLNTWLGEGGRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDP 507 (573)
T ss_pred HHHHHhhcCCCCCHHHHHHHHHHcCHHHHHHhChhhhhchhccCCCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCCh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhHHHHHHHHHHHcCCCeEEEEecCccchhccCEEEEEeCcEEEEecChhhhhccchHHHHHHh
Q 048639 429 ESEKLVQEALERAMQGRTVILIAHRMSTIVNADMIAVVEDGQVTETGTHHSLLQTSDFYNRLFT 492 (1139)
Q Consensus 429 ~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~ 492 (1139)
.|++++.+.+.+..+|||+|+||||+..++.||||+||++|+++++|+|++++++++.|+++++
T Consensus 508 ~TE~~vL~ll~~~~~~kTll~vTHrL~~le~~drIivl~~Gkiie~G~~~~Ll~~~g~~~~l~q 571 (573)
T COG4987 508 ITERQVLALLFEHAEGKTLLMVTHRLRGLERMDRIIVLDNGKIIEEGTHAELLANNGRYKRLYQ 571 (573)
T ss_pred hhHHHHHHHHHHHhcCCeEEEEecccccHhhcCEEEEEECCeeeecCCHHhhhccccHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999999999999999875
No 62
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=1.9e-72 Score=694.47 Aligned_cols=473 Identities=37% Similarity=0.597 Sum_probs=429.3
Q ss_pred HcCCcccccccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 21 IGGEVGAFDTDLSTGKVITGVSSHMSVIRDAIGEKLGHFLSSFATFFSGVLIAVICCWEVSLLIFLVVPMILVIGATYTK 100 (1139)
Q Consensus 21 l~~~~~~f~~~~~~G~l~~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~l~~l~~~~~~~~~~~~~~~ 100 (1139)
++.|.++|++. ++|++++|+++|++.+++++...+..++..+..+++.++++++++|.+++++++.+|+++++..++.+
T Consensus 102 ~~~~~~~~~~~-~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~l~~~~~~~~~~ 180 (576)
T TIGR02204 102 ISLSPSFFDKN-RSGEVVSRLTTDTTLLQSVIGSSLSMALRNALMCIGGLIMMFITSPKLTSLVLLAVPLVLLPILLFGR 180 (576)
T ss_pred HcCCHHHHccC-CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78899999986 89999999999999999999888888888888888899999999999999988888888888888999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 101 RMNAVSATKLLYLSEATSMIEQTISQIKTVFAFVGERSEIKSFSDCMDKQIIISRGEALIKGVGLGMFQSVTFCCWALII 180 (1139)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (1139)
+.++..++.++..++..+.+.|.++|+++||+|+.|+.+.++|.+..++..+...+..........+..++.++..++++
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (576)
T TIGR02204 181 RVRKLSRESQDRIADAGSYAGETLGAIRTVQAFGHEDAERSRFGGAVEKAYEAARQRIRTRALLTAIVIVLVFGAIVGVL 260 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999988888777776666666666566666677778
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccCCCC-ccccCCCccEEE
Q 048639 181 WVGAVVVTAKRSTGGEVLAAVMSILFGAIALTYAAPDMQVFNQAKAAGFEIFQVIQRKPRISYSSKG-KELEKIDGNIDI 259 (1139)
Q Consensus 181 ~~g~~~v~~~~l~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~-~~~~~~~~~i~~ 259 (1139)
++|++++.+|.+|+|.++++..+......|+..+...+..+..+..+.+|+.++++.+++....... ....+..+.|++
T Consensus 261 ~~g~~~v~~g~lt~g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~ 340 (576)
T TIGR02204 261 WVGAHDVIAGKMSAGTLGQFVFYAVMVAGSIGTLSEVWGELQRAAGAAERLIELLQAEPDIKAPAHPKTLPVPLRGEIEF 340 (576)
T ss_pred HHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCCCccCCcCCCceEEE
Confidence 8999999999999999999998888889999999999999999999999999999865442111111 111122356999
Q ss_pred EeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcceEEEe
Q 048639 260 RDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNIGAVS 339 (1139)
Q Consensus 260 ~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~ 339 (1139)
+||+|+|++++++++|+|+||+++|||+++|+||||||||||+++|+|+++|++|+|.+||.++.+++.+++|++|+|||
T Consensus 341 ~~v~f~y~~~~~~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~p~~G~I~i~g~~i~~~~~~~~~~~i~~~~ 420 (576)
T TIGR02204 341 EQVNFAYPARPDQPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDPQSGRILLDGVDLRQLDPAELRARMALVP 420 (576)
T ss_pred EEEEEECCCCCCCccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEECCEEHHhcCHHHHHHhceEEc
Confidence 99999998543367999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHccCCCEEEE
Q 048639 340 QEPSLFTGSLMDNIKVGNMDADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVKNPPILLL 419 (1139)
Q Consensus 340 Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~~~~illl 419 (1139)
|+|++|++||+|||.+++|+.++++++++++.+++.++++++|+|++|.+||+|.+||||||||++||||++++|+|+||
T Consensus 421 Q~~~lf~~Ti~~Ni~~~~~~~~~~~~~~~l~~~~l~~~i~~l~~gl~t~i~~~g~~LSgGq~Qrl~laRal~~~~~ilil 500 (576)
T TIGR02204 421 QDPVLFAASVMENIRYGRPDATDEEVEAAARAAHAHEFISALPEGYDTYLGERGVTLSGGQRQRIAIARAILKDAPILLL 500 (576)
T ss_pred cCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCcHHHHHhCCCCCCceeCCCCCcCCHHHHHHHHHHHHHHhCCCeEEE
Confidence 99999999999999999988889999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhccCEEEEEeCcEEEEecChhhhhccchHHHHHHhhc
Q 048639 420 DEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVNADMIAVVEDGQVTETGTHHSLLQTSDFYNRLFTMQ 494 (1139)
Q Consensus 420 DEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~ 494 (1139)
|||||+||+++++.+.+.++++.+++|+|+||||++.+..||+|++|++|++++.|+|++++++++.|++++..+
T Consensus 501 DEpts~lD~~~~~~i~~~l~~~~~~~t~IiitH~~~~~~~~d~vi~l~~g~~~~~g~~~~l~~~~~~~~~l~~~~ 575 (576)
T TIGR02204 501 DEATSALDAESEQLVQQALETLMKGRTTLIIAHRLATVLKADRIVVMDQGRIVAQGTHAELIAKGGLYARLARLQ 575 (576)
T ss_pred eCcccccCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEeeecHHHHHHcCChHHHHHhhc
Confidence 999999999999999999999888999999999999999999999999999999999999999999999887543
No 63
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=5.4e-74 Score=697.45 Aligned_cols=471 Identities=28% Similarity=0.437 Sum_probs=361.8
Q ss_pred cEEEEeEEEECCCC-CCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCC-----CccEEEECCccCCCCCHH
Q 048639 256 NIDIRDVCFAYPSR-PDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDP-----SNGDILIDSLNIKDLDLK 329 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~-~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~-----~~G~i~~~g~~~~~~~~~ 329 (1139)
.++++|++++|++. ..+++|+|+||++++||+++|+||||||||||+++|+|+++| ++|+|.++|.++...+..
T Consensus 5 ~l~~~~l~~~~~~~~~~~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~ 84 (529)
T PRK15134 5 LLAIENLSVAFRQQQTVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHASEQ 84 (529)
T ss_pred eEEEeceEEEecCCCCceeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCCHH
Confidence 48999999999632 124699999999999999999999999999999999999987 799999999998776543
Q ss_pred H---Hh-cceEEEecCCC--CCc-ccHHHHHhcCC---CCCCHHHHHHHHHHhcHHHHHHhCCCCCCc---cccccCCCC
Q 048639 330 S---LR-KNIGAVSQEPS--LFT-GSLMDNIKVGN---MDADDEQIYNASMMANAHSFISQLPDQYST---ELGQRGVQL 396 (1139)
Q Consensus 330 ~---~~-~~i~~v~Q~~~--l~~-~ti~~ni~~g~---~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t---~i~~~g~~L 396 (1139)
. +| ++++||+|++. +++ .|+++|+.++. .....++. ...+.+.++.+ |++. .......+|
T Consensus 85 ~~~~~~~~~ig~v~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~--gl~~~~~~~~~~~~~L 157 (529)
T PRK15134 85 TLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLHRGMRREAA-----RGEILNCLDRV--GIRQAAKRLTDYPHQL 157 (529)
T ss_pred HHHHHhcCceEEEecCchhhcCchhhHHHHHHHHHHHhcCCCHHHH-----HHHHHHHHHHC--CCCChHHHHhhCCccc
Confidence 2 33 57999999985 444 48999986421 01112211 11223345544 3322 246678899
Q ss_pred ChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCCeEEEEecCccchhc-cCEEEEEeCcEEEE
Q 048639 397 SGGQKQRIAIARAIVKNPPILLLDEATSALDSESEKLVQEALERAM--QGRTVILIAHRMSTIVN-ADMIAVVEDGQVTE 473 (1139)
Q Consensus 397 SgGqkqRi~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~ 473 (1139)
|||||||++|||||+.+|++||||||||+||+.+...+.+.|+++. .++|+|+|||+++.+.. ||+|++|++|++++
T Consensus 158 SgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~dri~~l~~G~i~~ 237 (529)
T PRK15134 158 SGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQELNMGLLFITHNLSIVRKLADRVAVMQNGRCVE 237 (529)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHhcCCeEEEEcCcHHHHHHhcCEEEEEECCEEEE
Confidence 9999999999999999999999999999999999999999998864 37999999999999875 99999999999999
Q ss_pred ecChhhhhccchHHHHHHhhccCCCCCCcCcccccccccccchhhhhhhcccCchhhhhhcccccchhhhcccccchhhH
Q 048639 474 TGTHHSLLQTSDFYNRLFTMQNLRPIDDSRTKASTVESTSTEQQISVVEQLEEPEESKRELSASTGQEEVKGKRTTIFFR 553 (1139)
Q Consensus 474 ~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 553 (1139)
.|+++++..... . .
T Consensus 238 ~g~~~~~~~~~~-----------------------------------------------------~---~---------- 251 (529)
T PRK15134 238 QNRAATLFSAPT-----------------------------------------------------H---P---------- 251 (529)
T ss_pred eCCHHHHhhCCC-----------------------------------------------------C---H----------
Confidence 888766531000 0 0
Q ss_pred HHHhhchhhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 554 IWFCLNERELLRLVVGTVAAAFSGISKPLFGFFIITIGVAYYDPQAKQEVGWYSLAFSLVGLFSLFTHTLQHYFFGVVGE 633 (1139)
Q Consensus 554 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 633 (1139)
. . .
T Consensus 252 ~-~---~------------------------------------------------------------------------- 254 (529)
T PRK15134 252 Y-T---Q------------------------------------------------------------------------- 254 (529)
T ss_pred H-H---H-------------------------------------------------------------------------
Confidence 0 0 0
Q ss_pred HHHHHHHHHHHHHHHcCCCcccccCCCChhHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 048639 634 KAMTNLRRTLYTGVLRNEIAWFEKPQNDAGSLTSRIVSDTSMVKAIISDRMSVIVQCISSILIATIVSLVVDWRMALVAW 713 (1139)
Q Consensus 634 ~~~~~l~~~l~~~ll~~~~~ff~~~~~~~G~i~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~~ 713 (1139)
.+++ .+ .
T Consensus 255 --------~~~~----~~-------~------------------------------------------------------ 261 (529)
T PRK15134 255 --------KLLN----SE-------P------------------------------------------------------ 261 (529)
T ss_pred --------HHHH----hC-------c------------------------------------------------------
Confidence 0000 00 0
Q ss_pred HHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHHHHHHhhcchHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 714 AVMPCHFIGGLIQAKSAQGFSGDSAAAHTEFISLTSESASNIRTVASFCHEENILQKAKISLEKTKRSSRKESIKYGVIQ 793 (1139)
Q Consensus 714 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 793 (1139)
T Consensus 262 -------------------------------------------------------------------------------- 261 (529)
T PRK15134 262 -------------------------------------------------------------------------------- 261 (529)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCC
Q 048639 794 GFSLCLWNIAHAVALWYTAVLIDKKQATFRDGIRAYQIFSLTVPSITELWTLIPTVISAITVLAPAFEILDRKTEIEPDA 873 (1139)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~ 873 (1139)
...+. ...
T Consensus 262 ----------------------------------------------------------------------~~~~~-~~~- 269 (529)
T PRK15134 262 ----------------------------------------------------------------------SGDPV-PLP- 269 (529)
T ss_pred ----------------------------------------------------------------------ccccc-ccC-
Confidence 00000 000
Q ss_pred CCCCCCCCccccEEEEeEEEECCCC--------CCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEE
Q 048639 874 PESSESGRIKGRIEFQNIKFNYPSR--------PEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGII 945 (1139)
Q Consensus 874 ~~~~~~~~~~g~I~~~nvsf~Y~~~--------~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I 945 (1139)
. .. ...|+++||+++|+.. .+.++|+|+||+|++||++||+||||||||||+++|.|++ |++|+|
T Consensus 270 ~----~~--~~~l~~~~l~~~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLlk~l~Gl~-~~~G~i 342 (529)
T PRK15134 270 E----PA--SPLLDVEQLQVAFPIRKGILKRTVDHNVVVKNISFTLRPGETLGLVGESGSGKSTTGLALLRLI-NSQGEI 342 (529)
T ss_pred C----CC--CCcccccCcEEEeecCccccccccccceeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhCcC-CCCcEE
Confidence 0 00 1148999999999621 1246999999999999999999999999999999999998 589999
Q ss_pred EECCcccCCCChHH---HhhhceEEcccc--cccc-ccHHHHhccCCC----cC----CHHHHHHHHHHcCch-HHHhhC
Q 048639 946 LIDGKGIKEYNLRR---LRSQIGLVQQEP--LLFS-CSIRNNICYGNE----AA----SEAEIVEVSKKANIH-DFISSL 1010 (1139)
Q Consensus 946 ~idG~di~~~~l~~---lR~~i~~V~Qdp--~LF~-gTIreNL~~~~~----~~----sd~ei~~al~~~~l~-~~i~~l 1010 (1139)
.+||.++..++... +|++++||||+| .+|. .|+++|+.++.. .. .++++.++++..++. +...+
T Consensus 343 ~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~- 421 (529)
T PRK15134 343 WFDGQPLHNLNRRQLLPVRHRIQVVFQDPNSSLNPRLNVLQIIEEGLRVHQPTLSAAQREQQVIAVMEEVGLDPETRHR- 421 (529)
T ss_pred EECCEEccccchhhHHHhhhceEEEEeCchhhcCCcccHHHHHHHHHHhccccCChHHHHHHHHHHHHHcCCCHHHHhc-
Confidence 99999998766543 477899999998 3665 599999976310 01 134567778887774 23322
Q ss_pred CCCccccccCCCCCCChHHHHHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEe
Q 048639 1011 PDGYDTVVGEKGCQLSGGQKQRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVA 1090 (1139)
Q Consensus 1011 p~gldt~v~e~G~~LSgGQrQrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~Ia 1090 (1139)
...+||||||||++|||||+.+|+||||||||++||+.+.+.+.+.|++... ..++|||+||
T Consensus 422 ----------~~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--------~~~~tvi~vs 483 (529)
T PRK15134 422 ----------YPAEFSGGQRQRIAIARALILKPSLIILDEPTSSLDKTVQAQILALLKSLQQ--------KHQLAYLFIS 483 (529)
T ss_pred ----------CCccCCHHHHHHHHHHHHHhCCCCEEEeeCCccccCHHHHHHHHHHHHHHHH--------hhCCEEEEEe
Confidence 2347999999999999999999999999999999999999999999997641 1244699999
Q ss_pred cCchhhhc-CCEEEEEeCCEEEEecChhHHhhccCChH
Q 048639 1091 HRLATVIN-SDVIVVMDKGEVVEMGSHSTLVAESQGVY 1127 (1139)
Q Consensus 1091 Hrl~ti~~-~DrI~vl~~G~ive~G~~~eLl~~~~g~f 1127 (1139)
|+++.+.. ||||++|++|+|++.|+++++++.+.-.|
T Consensus 484 Hd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~~~ 521 (529)
T PRK15134 484 HDLHVVRALCHQVIVLRQGEVVEQGDCERVFAAPQQEY 521 (529)
T ss_pred CCHHHHHHhcCeEEEEECCEEEEEcCHHHHhcCCCChH
Confidence 99999876 99999999999999999999986543333
No 64
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.9e-74 Score=692.68 Aligned_cols=457 Identities=20% Similarity=0.350 Sum_probs=356.1
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHH-Hhcc
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKS-LRKN 334 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~-~~~~ 334 (1139)
.|+++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... .+++
T Consensus 5 ~l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~ 81 (510)
T PRK09700 5 YISMAGIGKSFGP---VHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTITINNINYNKLDHKLAAQLG 81 (510)
T ss_pred eEEEeeeEEEcCC---eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCCccEEEECCEECCCCCHHHHHHCC
Confidence 4899999999963 46999999999999999999999999999999999999999999999999998776554 3467
Q ss_pred eEEEecCCCCCcc-cHHHHHhcCCCCC---------CHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHH
Q 048639 335 IGAVSQEPSLFTG-SLMDNIKVGNMDA---------DDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRI 404 (1139)
Q Consensus 335 i~~v~Q~~~l~~~-ti~~ni~~g~~~~---------~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi 404 (1139)
++||+|++.++.. |++||+.++.... ..++. ...+.+.++.+ |+.........+||||||||+
T Consensus 82 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~--gl~~~~~~~~~~LSgG~~qrv 154 (510)
T PRK09700 82 IGIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREM-----RVRAAMMLLRV--GLKVDLDEKVANLSISHKQML 154 (510)
T ss_pred eEEEeecccccCCCcHHHHhhhccccccccccccccCHHHH-----HHHHHHHHHHc--CCCCCcccchhhCCHHHHHHH
Confidence 9999999988865 9999998763210 11111 11233455555 454456677889999999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhc
Q 048639 405 AIARAIVKNPPILLLDEATSALDSESEKLVQEALERAM-QGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQ 482 (1139)
Q Consensus 405 ~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 482 (1139)
+|||||+.+|++|||||||++||+.+...+.+.|+++. +|+|+|+|||+++.+.. ||++++|++|+++..|+++++..
T Consensus 155 ~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 234 (510)
T PRK09700 155 EIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLAEIRRICDRYTVMKDGSSVCSGMVSDVSN 234 (510)
T ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEeeecchhhCCH
Confidence 99999999999999999999999999999999998875 47999999999999876 99999999999998887655421
Q ss_pred cchHHHHHHhhccCCCCCCcCcccccccccccchhhhhhhcccCchhhhhhcccccchhhhcccccchhhHHHHhhchhh
Q 048639 483 TSDFYNRLFTMQNLRPIDDSRTKASTVESTSTEQQISVVEQLEEPEESKRELSASTGQEEVKGKRTTIFFRIWFCLNERE 562 (1139)
Q Consensus 483 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (1139)
.. ..
T Consensus 235 ~~-----~~----------------------------------------------------------------------- 238 (510)
T PRK09700 235 DD-----IV----------------------------------------------------------------------- 238 (510)
T ss_pred HH-----HH-----------------------------------------------------------------------
Confidence 00 00
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 563 LLRLVVGTVAAAFSGISKPLFGFFIITIGVAYYDPQAKQEVGWYSLAFSLVGLFSLFTHTLQHYFFGVVGEKAMTNLRRT 642 (1139)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 642 (1139)
.
T Consensus 239 -----------------------------~-------------------------------------------------- 239 (510)
T PRK09700 239 -----------------------------R-------------------------------------------------- 239 (510)
T ss_pred -----------------------------H--------------------------------------------------
Confidence 0
Q ss_pred HHHHHHcCCCcccccCCCChhHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 048639 643 LYTGVLRNEIAWFEKPQNDAGSLTSRIVSDTSMVKAIISDRMSVIVQCISSILIATIVSLVVDWRMALVAWAVMPCHFIG 722 (1139)
Q Consensus 643 l~~~ll~~~~~ff~~~~~~~G~i~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~~~~~p~~~~~ 722 (1139)
.+ +. .. .
T Consensus 240 ---~~-------~~--~~-~------------------------------------------------------------ 246 (510)
T PRK09700 240 ---LM-------VG--RE-L------------------------------------------------------------ 246 (510)
T ss_pred ---Hh-------cC--CC-c------------------------------------------------------------
Confidence 00 00 00 0
Q ss_pred HHHHHHhhhchhhhHHHHHHHHHHHHHHhhcchHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 723 GLIQAKSAQGFSGDSAAAHTEFISLTSESASNIRTVASFCHEENILQKAKISLEKTKRSSRKESIKYGVIQGFSLCLWNI 802 (1139)
Q Consensus 723 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 802 (1139)
. .
T Consensus 247 -----------~---------------------------------------------~---------------------- 248 (510)
T PRK09700 247 -----------Q---------------------------------------------N---------------------- 248 (510)
T ss_pred -----------c---------------------------------------------c----------------------
Confidence 0 0
Q ss_pred HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCc
Q 048639 803 AHAVALWYTAVLIDKKQATFRDGIRAYQIFSLTVPSITELWTLIPTVISAITVLAPAFEILDRKTEIEPDAPESSESGRI 882 (1139)
Q Consensus 803 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~ 882 (1139)
......+. .... . .
T Consensus 249 ----------------------------------------------------------~~~~~~~~--~~~~----~--~ 262 (510)
T PRK09700 249 ----------------------------------------------------------RFNAMKEN--VSNL----A--H 262 (510)
T ss_pred ----------------------------------------------------------cccccccc--cccC----C--C
Confidence 00000000 0000 0 0
Q ss_pred cccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCCh-HHHh
Q 048639 883 KGRIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNL-RRLR 961 (1139)
Q Consensus 883 ~g~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l-~~lR 961 (1139)
+..|+++|+++.|. .+|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++|.++...+. ..+|
T Consensus 263 ~~~l~~~~l~~~~~-----~~l~~isl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~p~~G~I~~~g~~~~~~~~~~~~~ 337 (510)
T PRK09700 263 ETVFEVRNVTSRDR-----KKVRDISFSVCRGEILGFAGLVGSGRTELMNCLFGVDKRAGGEIRLNGKDISPRSPLDAVK 337 (510)
T ss_pred CcEEEEeCccccCC-----CcccceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCCCeEEECCEECCCCCHHHHHH
Confidence 11499999999762 28999999999999999999999999999999999999999999999999876543 4567
Q ss_pred hhceEEcccc---cccc-ccHHHHhccCCCc---------------CCHHHHHHHHHHcCchHHHhhCCCCccccccCCC
Q 048639 962 SQIGLVQQEP---LLFS-CSIRNNICYGNEA---------------ASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKG 1022 (1139)
Q Consensus 962 ~~i~~V~Qdp---~LF~-gTIreNL~~~~~~---------------~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G 1022 (1139)
++++||||++ .+|. -|+++|+.++... ...+++.++++..++.. +..+.++
T Consensus 338 ~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~------~~~~~~~---- 407 (510)
T PRK09700 338 KGMAYITESRRDNGFFPNFSIAQNMAISRSLKDGGYKGAMGLFHEVDEQRTAENQRELLALKC------HSVNQNI---- 407 (510)
T ss_pred CCcEEccCccccCCCcCCCcHHHHhccccccccccccccccccChHHHHHHHHHHHHhcCCCC------CCccCcc----
Confidence 8899999984 5665 5999999864210 01123556666666530 1233333
Q ss_pred CCCChHHHHHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCE
Q 048639 1023 CQLSGGQKQRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDV 1101 (1139)
Q Consensus 1023 ~~LSgGQrQrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~Dr 1101 (1139)
..||||||||++|||||+++|+|||||||||+||+.+.+.+.+.|++.. ..++|||+|||+++.+.. |||
T Consensus 408 ~~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~---------~~g~tvi~vsHd~~~~~~~~d~ 478 (510)
T PRK09700 408 TELSGGNQQKVLISKWLCCCPEVIIFDEPTRGIDVGAKAEIYKVMRQLA---------DDGKVILMVSSELPEIITVCDR 478 (510)
T ss_pred ccCChHHHHHHHHHHHHhcCCCEEEECCCCCCcCHHHHHHHHHHHHHHH---------HCCCEEEEEcCCHHHHHhhCCE
Confidence 4699999999999999999999999999999999999999999999764 334569999999998876 999
Q ss_pred EEEEeCCEEEEecChhH
Q 048639 1102 IVVMDKGEVVEMGSHST 1118 (1139)
Q Consensus 1102 I~vl~~G~ive~G~~~e 1118 (1139)
|++|++|++++.+++.+
T Consensus 479 i~~l~~G~i~~~~~~~~ 495 (510)
T PRK09700 479 IAVFCEGRLTQILTNRD 495 (510)
T ss_pred EEEEECCEEEEEecCcc
Confidence 99999999999887733
No 65
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=1.8e-73 Score=688.26 Aligned_cols=452 Identities=24% Similarity=0.394 Sum_probs=354.1
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHH-Hhcc
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKS-LRKN 334 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~-~~~~ 334 (1139)
.|+++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... .++.
T Consensus 4 ~i~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 80 (501)
T PRK10762 4 LLQLKGIDKAFPG---VKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGSILYLGKEVTFNGPKSSQEAG 80 (501)
T ss_pred eEEEeeeEEEeCC---eEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHhCC
Confidence 4899999999963 46999999999999999999999999999999999999999999999999986655443 3578
Q ss_pred eEEEecCCCCCcc-cHHHHHhcCCCC------CCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHH
Q 048639 335 IGAVSQEPSLFTG-SLMDNIKVGNMD------ADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIA 407 (1139)
Q Consensus 335 i~~v~Q~~~l~~~-ti~~ni~~g~~~------~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lA 407 (1139)
++||+|++.++.. |++||+.++... ....+.. ..+.+.++.+ |+.........+||||||||++||
T Consensus 81 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la 153 (501)
T PRK10762 81 IGIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMY-----AEADKLLARL--NLRFSSDKLVGELSIGEQQMVEIA 153 (501)
T ss_pred EEEEEcchhccCCCcHHHHhhhccccccccCccCHHHHH-----HHHHHHHHHc--CCCCCccCchhhCCHHHHHHHHHH
Confidence 9999999988865 999999986421 1111111 1233455655 444455677889999999999999
Q ss_pred HHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhccch
Q 048639 408 RAIVKNPPILLLDEATSALDSESEKLVQEALERAM-QGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQTSD 485 (1139)
Q Consensus 408 Ral~~~~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~ 485 (1139)
|||+.+|++|||||||++||+.+...+.+.|+++. +++|+|++||+++.+.. ||+|++|++|++++.|+.+++....
T Consensus 154 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~- 232 (501)
T PRK10762 154 KVLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLKEIFEICDDVTVFRDGQFIAEREVADLTEDS- 232 (501)
T ss_pred HHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEecCcCcCCHHH-
Confidence 99999999999999999999999999999998864 47899999999999876 9999999999999877554321000
Q ss_pred HHHHHHhhccCCCCCCcCcccccccccccchhhhhhhcccCchhhhhhcccccchhhhcccccchhhHHHHhhchhhHHH
Q 048639 486 FYNRLFTMQNLRPIDDSRTKASTVESTSTEQQISVVEQLEEPEESKRELSASTGQEEVKGKRTTIFFRIWFCLNERELLR 565 (1139)
Q Consensus 486 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 565 (1139)
. .
T Consensus 233 --------------------------------------------------------------------~-~--------- 234 (501)
T PRK10762 233 --------------------------------------------------------------------L-I--------- 234 (501)
T ss_pred --------------------------------------------------------------------H-H---------
Confidence 0 0
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 566 LVVGTVAAAFSGISKPLFGFFIITIGVAYYDPQAKQEVGWYSLAFSLVGLFSLFTHTLQHYFFGVVGEKAMTNLRRTLYT 645 (1139)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 645 (1139)
..
T Consensus 235 --------------------------~~---------------------------------------------------- 236 (501)
T PRK10762 235 --------------------------EM---------------------------------------------------- 236 (501)
T ss_pred --------------------------HH----------------------------------------------------
Confidence 00
Q ss_pred HHHcCCCcccccCCCChhHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Q 048639 646 GVLRNEIAWFEKPQNDAGSLTSRIVSDTSMVKAIISDRMSVIVQCISSILIATIVSLVVDWRMALVAWAVMPCHFIGGLI 725 (1139)
Q Consensus 646 ~ll~~~~~ff~~~~~~~G~i~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~~~~~p~~~~~~~~ 725 (1139)
++. ..
T Consensus 237 --------~~~--~~----------------------------------------------------------------- 241 (501)
T PRK10762 237 --------MVG--RK----------------------------------------------------------------- 241 (501)
T ss_pred --------hcC--CC-----------------------------------------------------------------
Confidence 000 00
Q ss_pred HHHhhhchhhhHHHHHHHHHHHHHHhhcchHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 726 QAKSAQGFSGDSAAAHTEFISLTSESASNIRTVASFCHEENILQKAKISLEKTKRSSRKESIKYGVIQGFSLCLWNIAHA 805 (1139)
Q Consensus 726 ~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 (1139)
T Consensus 242 -------------------------------------------------------------------------------- 241 (501)
T PRK10762 242 -------------------------------------------------------------------------------- 241 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCcccc
Q 048639 806 VALWYTAVLIDKKQATFRDGIRAYQIFSLTVPSITELWTLIPTVISAITVLAPAFEILDRKTEIEPDAPESSESGRIKGR 885 (1139)
Q Consensus 806 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~ 885 (1139)
. ....+.. +. ++. .-.
T Consensus 242 --------------~------------------------------------------~~~~~~~-~~-----~~~--~~~ 257 (501)
T PRK10762 242 --------------L------------------------------------------EDQYPRL-DK-----APG--EVR 257 (501)
T ss_pred --------------c------------------------------------------ccccccc-cc-----CCC--CcE
Confidence 0 0000000 00 000 114
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChH-HHhhhc
Q 048639 886 IEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLR-RLRSQI 964 (1139)
Q Consensus 886 I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~-~lR~~i 964 (1139)
|+++|+++ ++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+.. .+|+++
T Consensus 258 l~~~~l~~--------~~l~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~G~~~p~~G~I~~~g~~i~~~~~~~~~~~~i 329 (501)
T PRK10762 258 LKVDNLSG--------PGVNDVSFTLRKGEILGVSGLMGAGRTELMKVLYGALPRTSGYVTLDGHEVVTRSPQDGLANGI 329 (501)
T ss_pred EEEeCccc--------CCcccceEEEcCCcEEEEecCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHHHHCCC
Confidence 88999984 269999999999999999999999999999999999999999999999999876653 467889
Q ss_pred eEEcccc---ccc-cccHHHHhccCCC----c----CC----HHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChH
Q 048639 965 GLVQQEP---LLF-SCSIRNNICYGNE----A----AS----EAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGG 1028 (1139)
Q Consensus 965 ~~V~Qdp---~LF-~gTIreNL~~~~~----~----~s----d~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgG 1028 (1139)
+||||+| .+| ..|+++|+.++.. . .+ ++++.++++..++.+ +..+. ....||||
T Consensus 330 ~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~------~~~~~----~~~~LSgG 399 (501)
T PRK10762 330 VYISEDRKRDGLVLGMSVKENMSLTALRYFSRAGGSLKHADEQQAVSDFIRLFNIKT------PSMEQ----AIGLLSGG 399 (501)
T ss_pred EEecCccccCCCcCCCcHHHHhhhhhhhhhcccccccCHHHHHHHHHHHHHhcCCCC------CCccC----chhhCCHH
Confidence 9999997 344 4699999976311 0 11 234556666665521 11233 34579999
Q ss_pred HHHHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeC
Q 048639 1029 QKQRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDK 1107 (1139)
Q Consensus 1029 QrQrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~ 1107 (1139)
||||++|||||+.+|+||||||||++||+.+.+.+.+.|++.. .+++|||+|||+++.+.. ||+|++|++
T Consensus 400 ekqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~---------~~g~tviivtHd~~~~~~~~d~v~~l~~ 470 (501)
T PRK10762 400 NQQKVAIARGLMTRPKVLILDEPTRGVDVGAKKEIYQLINQFK---------AEGLSIILVSSEMPEVLGMSDRILVMHE 470 (501)
T ss_pred HHHHHHHHHHHhhCCCEEEEcCCCCCCCHhHHHHHHHHHHHHH---------HCCCEEEEEcCCHHHHHhhCCEEEEEEC
Confidence 9999999999999999999999999999999999999999864 334569999999999876 999999999
Q ss_pred CEEEEecChhHHh
Q 048639 1108 GEVVEMGSHSTLV 1120 (1139)
Q Consensus 1108 G~ive~G~~~eLl 1120 (1139)
|++++.|+++++.
T Consensus 471 G~i~~~~~~~~~~ 483 (501)
T PRK10762 471 GRISGEFTREQAT 483 (501)
T ss_pred CEEEEEeccccCC
Confidence 9999999988764
No 66
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=7.9e-72 Score=742.52 Aligned_cols=480 Identities=22% Similarity=0.342 Sum_probs=413.9
Q ss_pred HHHHHHHHHHHHH---------HcCCcccccccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhH
Q 048639 8 LSWHPKGNRVLMK---------IGGEVGAFDTDLSTGKVITGVSSHMSVIRDAIGEKLGHFLSSFATFFSGVLIAVICCW 78 (1139)
Q Consensus 8 ~~~~~~~~~~~~~---------l~~~~~~f~~~~~~G~l~~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 78 (1139)
+++...+.+.+++ ++.|++||+++ ++|+++||+++|++.+++.+...+..++..++.+++.++++++.+|
T Consensus 1027 ~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~-~~G~ilnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~li~~~~~~~ 1105 (1522)
T TIGR00957 1027 MAVSIGGIQASRVLHQDLLHNKLRSPMSFFERT-PSGNLVNRFSKELDTVDSMIPPVIKMFMGSLFNVIGALIVILLATP 1105 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCChhHhccC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445556666555 88999999997 8999999999999999999999999999999999999888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Q 048639 79 EVSLLIFLVVPMILVIGATYTKRMNAVSATKLLYLSEATSMIEQTISQIKTVFAFVGERSEIKSFSDCMDKQIIISRGEA 158 (1139)
Q Consensus 79 ~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~ 158 (1139)
.+++++++++++++++..++.+..++..+......+.+.+++.|+++|+++||+|++|+.+.+++.+..+...+......
T Consensus 1106 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~l~~~~~E~l~Gi~tIraf~~~~~f~~~~~~~~~~~~~~~~~~~ 1185 (1522)
T TIGR00957 1106 IAAVIIPPLGLLYFFVQRFYVASSRQLKRLESVSRSPVYSHFNETLLGVSVIRAFEEQERFIHQSDLKVDENQKAYYPSI 1185 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCCcHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77766666666666777777777777777778888999999999999999999999999999988888777766655444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 048639 159 LIKGVGLGMFQSVTFCCWALIIWVGAVVVT-AKRSTGGEVLAAVMSILFGAIALTYAAPDMQVFNQAKAAGFEIFQVIQR 237 (1139)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~-~~~l~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ri~~~l~~ 237 (1139)
....+......++.. +++++++.+.+. .+.+++|.+.+++.+......|+..+...+..+..+..|.+|+.++++.
T Consensus 1186 ~~~~~~~~~~~~~~~---~~~~~~~~~~v~~~~~~~~g~l~~~l~~~~~~~~~l~~l~~~~~~~e~~~~s~eRi~~~~~~ 1262 (1522)
T TIGR00957 1186 VANRWLAVRLECVGN---CIVLFAALFAVISRHSLSAGLVGLSVSYSLQVTFYLNWLVRMSSEMETNIVAVERLKEYSET 1262 (1522)
T ss_pred HHHHHHHHHHHHHHH---HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 444443333333322 233444555554 5789999999999999999999999999999999999999999999976
Q ss_pred CCCCccC-CCCcccc--CCCccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCcc
Q 048639 238 KPRISYS-SKGKELE--KIDGNIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNG 314 (1139)
Q Consensus 238 ~~~~~~~-~~~~~~~--~~~~~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G 314 (1139)
+++.... ....++. +.++.|+|+||+|+|+++ .+++|+|+||+|++||++||||+||||||||+++|.|+++|++|
T Consensus 1263 ~~e~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~-~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~~~~G 1341 (1522)
T TIGR00957 1263 EKEAPWQIQETAPPSGWPPRGRVEFRNYCLRYRED-LDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINESAEG 1341 (1522)
T ss_pred CCCccccccCCCCCCCCCCCCcEEEEEEEEEeCCC-CcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCccCCCC
Confidence 5543211 1111111 245789999999999754 34799999999999999999999999999999999999999999
Q ss_pred EEEECCccCCCCCHHHHhcceEEEecCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCC
Q 048639 315 DILIDSLNIKDLDLKSLRKNIGAVSQEPSLFTGSLMDNIKVGNMDADDEQIYNASMMANAHSFISQLPDQYSTELGQRGV 394 (1139)
Q Consensus 315 ~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~ 394 (1139)
+|.+||+|+++++.+++|++|+||||||.||+|||||||.... +++++++++|++.+++++++.++|+|+||.+||+|.
T Consensus 1342 ~I~IdG~dI~~i~~~~LR~~i~iVpQdp~LF~gTIr~NLdp~~-~~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~G~ 1420 (1522)
T TIGR00957 1342 EIIIDGLNIAKIGLHDLRFKITIIPQDPVLFSGSLRMNLDPFS-QYSDEEVWWALELAHLKTFVSALPDKLDHECAEGGE 1420 (1522)
T ss_pred eEEECCEEccccCHHHHHhcCeEECCCCcccCccHHHHcCccc-CCCHHHHHHHHHHcCcHHHHhhCccCCCceecCCCC
Confidence 9999999999999999999999999999999999999998433 688999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhccCEEEEEeCcEEEEe
Q 048639 395 QLSGGQKQRIAIARAIVKNPPILLLDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVNADMIAVVEDGQVTET 474 (1139)
Q Consensus 395 ~LSgGqkqRi~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~ 474 (1139)
+||||||||+||||||+++|+|||||||||+||++|++.|++.|++..+++|+|+||||++++.+||||+||++|+|+|.
T Consensus 1421 ~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~~~~TvI~IAHRl~ti~~~DrIlVld~G~IvE~ 1500 (1522)
T TIGR00957 1421 NLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQFEDCTVLTIAHRLNTIMDYTRVIVLDKGEVAEF 1500 (1522)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEEE
Confidence 99999999999999999999999999999999999999999999998899999999999999999999999999999999
Q ss_pred cChhhhhccchHHHHHHhh
Q 048639 475 GTHHSLLQTSDFYNRLFTM 493 (1139)
Q Consensus 475 g~~~~l~~~~~~~~~~~~~ 493 (1139)
|+|++|+++++.|+++++.
T Consensus 1501 G~~~eLl~~~~~f~~l~~~ 1519 (1522)
T TIGR00957 1501 GAPSNLLQQRGIFYSMAKD 1519 (1522)
T ss_pred CCHHHHHhCCCHHHHHHHH
Confidence 9999999988999999864
No 67
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=2.5e-73 Score=690.82 Aligned_cols=459 Identities=26% Similarity=0.454 Sum_probs=351.9
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhcc--CCCccEEEEC---------------
Q 048639 257 IDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFY--DPSNGDILID--------------- 319 (1139)
Q Consensus 257 i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~--~~~~G~i~~~--------------- 319 (1139)
|+++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+. +|++|+|.++
T Consensus 1 l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~~G~i~~~~~~~~~~~~~~~~~~ 77 (520)
T TIGR03269 1 IEVKNLTKKFDG---KEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPTSGRIIYHVALCEKCGYVERPSK 77 (520)
T ss_pred CEEEEEEEEECC---eEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCCceEEEEeccccccccccccccc
Confidence 478999999963 46999999999999999999999999999999999996 7999999997
Q ss_pred --------CccCC-------CCC---HHHHhcceEEEecC-CCCCc-ccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHH
Q 048639 320 --------SLNIK-------DLD---LKSLRKNIGAVSQE-PSLFT-GSLMDNIKVGNM--DADDEQIYNASMMANAHSF 377 (1139)
Q Consensus 320 --------g~~~~-------~~~---~~~~~~~i~~v~Q~-~~l~~-~ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~ 377 (1139)
|.++. ..+ ...+|+.++||+|+ +.+|+ .|++||+.++.. ....++.. ..+.+.
T Consensus 78 ~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~~~~ 152 (520)
T TIGR03269 78 VGEPCPVCGGTLEPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEIGYEGKEAV-----GRAVDL 152 (520)
T ss_pred cccccccccccccccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHcCCCHHHHH-----HHHHHH
Confidence 33221 111 12456789999998 57776 499999987521 11222211 123344
Q ss_pred HHhCCCCCCccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCCeEEEEecCcc
Q 048639 378 ISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVKNPPILLLDEATSALDSESEKLVQEALERAM--QGRTVILIAHRMS 455 (1139)
Q Consensus 378 i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~~~ 455 (1139)
++.+ |++........+||||||||++|||||+.+|++|||||||++||+.+.+.+.+.|+++. .++|||+|||+++
T Consensus 153 l~~~--gl~~~~~~~~~~LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivtHd~~ 230 (520)
T TIGR03269 153 IEMV--QLSHRITHIARDLSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHNALEEAVKASGISMVLTSHWPE 230 (520)
T ss_pred HHHc--CChhhhhcCcccCCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH
Confidence 5555 45555567788999999999999999999999999999999999999999999998874 3789999999999
Q ss_pred chhc-cCEEEEEeCcEEEEecChhhhhccchHHHHHHhhccCCCCCCcCcccccccccccchhhhhhhcccCchhhhhhc
Q 048639 456 TIVN-ADMIAVVEDGQVTETGTHHSLLQTSDFYNRLFTMQNLRPIDDSRTKASTVESTSTEQQISVVEQLEEPEESKREL 534 (1139)
Q Consensus 456 ~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 (1139)
.+.. ||+|++|++|+++..|+++++...
T Consensus 231 ~~~~~~d~i~~l~~G~i~~~g~~~~~~~~--------------------------------------------------- 259 (520)
T TIGR03269 231 VIEDLSDKAIWLENGEIKEEGTPDEVVAV--------------------------------------------------- 259 (520)
T ss_pred HHHHhcCEEEEEeCCEEeeecCHHHHHHH---------------------------------------------------
Confidence 9875 999999999999876654432100
Q ss_pred ccccchhhhcccccchhhHHHHhhchhhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHH
Q 048639 535 SASTGQEEVKGKRTTIFFRIWFCLNERELLRLVVGTVAAAFSGISKPLFGFFIITIGVAYYDPQAKQEVGWYSLAFSLVG 614 (1139)
Q Consensus 535 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 614 (1139)
+
T Consensus 260 -------------------~------------------------------------------------------------ 260 (520)
T TIGR03269 260 -------------------F------------------------------------------------------------ 260 (520)
T ss_pred -------------------H------------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccCCCChhHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHH
Q 048639 615 LFSLFTHTLQHYFFGVVGEKAMTNLRRTLYTGVLRNEIAWFEKPQNDAGSLTSRIVSDTSMVKAIISDRMSVIVQCISSI 694 (1139)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~~~~ff~~~~~~~G~i~~r~~~D~~~i~~~~~~~l~~~~~~~~~~ 694 (1139)
.. .
T Consensus 261 ----------------------------------------~~--~----------------------------------- 263 (520)
T TIGR03269 261 ----------------------------------------ME--G----------------------------------- 263 (520)
T ss_pred ----------------------------------------Hh--h-----------------------------------
Confidence 00 0
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHHHHHHhhcchHHHHhhcchHHHHHHHHHH
Q 048639 695 LIATIVSLVVDWRMALVAWAVMPCHFIGGLIQAKSAQGFSGDSAAAHTEFISLTSESASNIRTVASFCHEENILQKAKIS 774 (1139)
Q Consensus 695 ~~~~~~~~~~~~~l~lv~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~ 774 (1139)
+ .
T Consensus 264 -----------~---------------------------~---------------------------------------- 265 (520)
T TIGR03269 264 -----------V---------------------------S---------------------------------------- 265 (520)
T ss_pred -----------c---------------------------h----------------------------------------
Confidence 0 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 775 LEKTKRSSRKESIKYGVIQGFSLCLWNIAHAVALWYTAVLIDKKQATFRDGIRAYQIFSLTVPSITELWTLIPTVISAIT 854 (1139)
Q Consensus 775 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 854 (1139)
T Consensus 266 -------------------------------------------------------------------------------- 265 (520)
T TIGR03269 266 -------------------------------------------------------------------------------- 265 (520)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHhccCCCCCCCCCCCCCCCCccccEEEEeEEEECCC--CCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHH
Q 048639 855 VLAPAFEILDRKTEIEPDAPESSESGRIKGRIEFQNIKFNYPS--RPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLA 932 (1139)
Q Consensus 855 ~~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~nvsf~Y~~--~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~ 932 (1139)
+ ..... .. +. . ...|+++||+++|++ +...++|+|+||+|++||++||+||||||||||++
T Consensus 266 ---~----~~~~~---~~-~~----~--~~~l~~~~l~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~NGsGKSTLl~ 328 (520)
T TIGR03269 266 ---E----VEKEC---EV-EV----G--EPIIKVRNVSKRYISVDRGVVKAVDNVSLEVKEGEIFGIVGTSGAGKTTLSK 328 (520)
T ss_pred ---h----hcccc---cc-CC----C--CceEEEeccEEEeccCCCCCceEEeeEEEEEcCCCEEEEECCCCCCHHHHHH
Confidence 0 00000 00 00 0 124999999999963 11246999999999999999999999999999999
Q ss_pred HHhccccCCccEEEEC-Cc---ccCCCC---hHHHhhhceEEcccccccc-ccHHHHhccCC----Cc-CCHHHHHHHHH
Q 048639 933 LLLRFYDPNEGIILID-GK---GIKEYN---LRRLRSQIGLVQQEPLLFS-CSIRNNICYGN----EA-ASEAEIVEVSK 999 (1139)
Q Consensus 933 lL~rl~~p~~G~I~id-G~---di~~~~---l~~lR~~i~~V~Qdp~LF~-gTIreNL~~~~----~~-~sd~ei~~al~ 999 (1139)
+|.|+++|++|+|.++ |. ++...+ ...+|++++||||++.+|. .|+++|+.++. +. ..++++.++++
T Consensus 329 ~l~Gl~~p~~G~i~~~~g~~~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~l~ 408 (520)
T TIGR03269 329 IIAGVLEPTSGEVNVRVGDEWVDMTKPGPDGRGRAKRYIGILHQEYDLYPHRTVLDNLTEAIGLELPDELARMKAVITLK 408 (520)
T ss_pred HHhCCCCCCCeEEEEecCCccccccccchhhHHHHhhhEEEEccCcccCCCCcHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 9999999999999996 64 334332 2356778999999998886 59999997521 11 12345667788
Q ss_pred HcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccc
Q 048639 1000 KANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGE 1079 (1139)
Q Consensus 1000 ~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~ 1079 (1139)
..++.+.- .++-++.+ ...||||||||++|||||+.+|+||||||||++||+.+.+.+.+.|++...
T Consensus 409 ~~~l~~~~--~~~~~~~~----~~~LSgGq~qrv~laral~~~p~lLllDEPt~~LD~~~~~~l~~~l~~l~~------- 475 (520)
T TIGR03269 409 MVGFDEEK--AEEILDKY----PDELSEGERHRVALAQVLIKEPRIVILDEPTGTMDPITKVDVTHSILKARE------- 475 (520)
T ss_pred hCCCCCcc--chhhhhCC----hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-------
Confidence 87774310 00001222 357999999999999999999999999999999999999999999987641
Q ss_pred cCCCeEEEEEecCchhhhc-CCEEEEEeCCEEEEecChhHHhh
Q 048639 1080 LASRTTQITVAHRLATVIN-SDVIVVMDKGEVVEMGSHSTLVA 1121 (1139)
Q Consensus 1080 ~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eLl~ 1121 (1139)
..++|||+|||+++.+.. ||||++|++|++++.|+++++.+
T Consensus 476 -~~g~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 517 (520)
T TIGR03269 476 -EMEQTFIIVSHDMDFVLDVCDRAALMRDGKIVKIGDPEEIVE 517 (520)
T ss_pred -HcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 224569999999999976 99999999999999999998864
No 68
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=5.2e-73 Score=605.85 Aligned_cols=474 Identities=29% Similarity=0.475 Sum_probs=368.5
Q ss_pred cEEEEeEEEECCCC-CCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCC-----CccEEEECCccCCCCCHH
Q 048639 256 NIDIRDVCFAYPSR-PDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDP-----SNGDILIDSLNIKDLDLK 329 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~-~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~-----~~G~i~~~g~~~~~~~~~ 329 (1139)
-++++|++..|... ....++++|||+|++||.+||||+||||||-..+.++|+++. -+|+|.++|.|+-..+.+
T Consensus 6 lL~v~nLsV~f~~~~~~~~aVk~isf~i~~GEtlAlVGESGSGKSvTa~sim~LLp~~~~~~~sg~i~f~G~dll~~se~ 85 (534)
T COG4172 6 LLSIRNLSVAFHQEGGTVEAVKGISFDIEAGETLALVGESGSGKSVTALSILGLLPSPAAAHPSGSILFDGEDLLAASER 85 (534)
T ss_pred ceeeeccEEEEecCCcceEeeccceeeecCCCEEEEEecCCCCccHHHHHHHHhcCCCcccCccceeEEcChhhhcCCHH
Confidence 48899999888532 235699999999999999999999999999999999999874 379999999999888877
Q ss_pred HHh----cceEEEecCCC--CCcc-cHH----HHHhcCCCCCCHHHHHHHHHHhcHHHHHHhC--CCCCCccccccCCCC
Q 048639 330 SLR----KNIGAVSQEPS--LFTG-SLM----DNIKVGNMDADDEQIYNASMMANAHSFISQL--PDQYSTELGQRGVQL 396 (1139)
Q Consensus 330 ~~~----~~i~~v~Q~~~--l~~~-ti~----~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l--~~g~~t~i~~~g~~L 396 (1139)
.+| .+|+++||+|. |-+- ||- |-|.+-. . +..+...+.+.+.++.. |+ -.-.+...+.+|
T Consensus 86 ~lr~iRG~~I~MIFQEPMtSLNPl~tIg~Qi~E~l~~Hr-g-----~~~~~Ar~r~lelL~~VgI~~-p~~rl~~yPHeL 158 (534)
T COG4172 86 QLRGVRGNKIGMIFQEPMTSLNPLHTIGKQLAEVLRLHR-G-----LSRAAARARALELLELVGIPE-PEKRLDAYPHEL 158 (534)
T ss_pred HHhhhcccceEEEecccccccCcHhHHHHHHHHHHHHHh-c-----ccHHHHHHHHHHHHHHcCCCc-hhhhhhhCCccc
Confidence 776 37999999994 3221 443 4443321 1 11122222333333332 32 124567788999
Q ss_pred ChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CCeEEEEecCccchhc-cCEEEEEeCcEEEE
Q 048639 397 SGGQKQRIAIARAIVKNPPILLLDEATSALDSESEKLVQEALERAMQ--GRTVILIAHRMSTIVN-ADMIAVVEDGQVTE 473 (1139)
Q Consensus 397 SgGqkqRi~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~ 473 (1139)
||||||||.||.||+.+|++||-||||.|||...+.+|.+.|+++.+ |..+++||||+..+++ ||||+||.+|+++|
T Consensus 159 SGGqRQRVMIAMALan~P~lLIADEPTTALDVtvQaQIL~Ll~~Lq~~~gMa~lfITHDL~iVr~~ADrV~VM~~G~ivE 238 (534)
T COG4172 159 SGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILDLLKELQAELGMAILFITHDLGIVRKFADRVYVMQHGEIVE 238 (534)
T ss_pred CcchhhHHHHHHHHcCCCCeEeecCCcchhhhhhHHHHHHHHHHHHHHhCcEEEEEeccHHHHHHhhhhEEEEeccEEee
Confidence 99999999999999999999999999999999999999999998753 8999999999999987 99999999999999
Q ss_pred ecChhhhhccch-HHHHHHhhccCCCCCCcCcccccccccccchhhhhhhcccCchhhhhhcccccchhhhcccccchhh
Q 048639 474 TGTHHSLLQTSD-FYNRLFTMQNLRPIDDSRTKASTVESTSTEQQISVVEQLEEPEESKRELSASTGQEEVKGKRTTIFF 552 (1139)
Q Consensus 474 ~g~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 552 (1139)
+|+.+++.+.+. .|.+.
T Consensus 239 ~~~t~~lF~~PqHpYTr~-------------------------------------------------------------- 256 (534)
T COG4172 239 TGTTETLFAAPQHPYTRK-------------------------------------------------------------- 256 (534)
T ss_pred cCcHHHHhhCCCChHHHH--------------------------------------------------------------
Confidence 998776643210 00000
Q ss_pred HHHHhhchhhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 553 RIWFCLNERELLRLVVGTVAAAFSGISKPLFGFFIITIGVAYYDPQAKQEVGWYSLAFSLVGLFSLFTHTLQHYFFGVVG 632 (1139)
Q Consensus 553 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 632 (1139)
T Consensus 257 -------------------------------------------------------------------------------- 256 (534)
T COG4172 257 -------------------------------------------------------------------------------- 256 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHcCCCcccccCCCChhHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Q 048639 633 EKAMTNLRRTLYTGVLRNEIAWFEKPQNDAGSLTSRIVSDTSMVKAIISDRMSVIVQCISSILIATIVSLVVDWRMALVA 712 (1139)
Q Consensus 633 ~~~~~~l~~~l~~~ll~~~~~ff~~~~~~~G~i~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~ 712 (1139)
T Consensus 257 -------------------------------------------------------------------------------- 256 (534)
T COG4172 257 -------------------------------------------------------------------------------- 256 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHHHHHHhhcchHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 713 WAVMPCHFIGGLIQAKSAQGFSGDSAAAHTEFISLTSESASNIRTVASFCHEENILQKAKISLEKTKRSSRKESIKYGVI 792 (1139)
Q Consensus 713 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 792 (1139)
T Consensus 257 -------------------------------------------------------------------------------- 256 (534)
T COG4172 257 -------------------------------------------------------------------------------- 256 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCC
Q 048639 793 QGFSLCLWNIAHAVALWYTAVLIDKKQATFRDGIRAYQIFSLTVPSITELWTLIPTVISAITVLAPAFEILDRKTEIEPD 872 (1139)
Q Consensus 793 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~ 872 (1139)
+++.+|.-.+
T Consensus 257 ---------------------------------------------------------------------Ll~aeP~g~~- 266 (534)
T COG4172 257 ---------------------------------------------------------------------LLAAEPSGDP- 266 (534)
T ss_pred ---------------------------------------------------------------------HHhcCCCCCC-
Confidence 0000111100
Q ss_pred CCCCCCCCCccccEEEEeEEEECCCCC--------CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccE
Q 048639 873 APESSESGRIKGRIEFQNIKFNYPSRP--------EVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGI 944 (1139)
Q Consensus 873 ~~~~~~~~~~~g~I~~~nvsf~Y~~~~--------~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~ 944 (1139)
.+.+...+--++.+||...||-++ ...++++|||+.++||.+||||+|||||||+-.+|+|+.+++ |+
T Consensus 267 ---~p~~~~~~~ll~~~~v~v~f~i~~g~~~r~~~~~~AVd~isl~L~~gqTlGlVGESGSGKsTlG~allrL~~s~-G~ 342 (534)
T COG4172 267 ---PPLPEDAPVLLEVEDLRVWFPIKGGFLRRTVDHLRAVDGISLTLRRGQTLGLVGESGSGKSTLGLALLRLIPSQ-GE 342 (534)
T ss_pred ---CCCCCCCCceEEecceEEEEecCCccccccchheEEeccceeEecCCCeEEEEecCCCCcchHHHHHHhhcCcC-ce
Confidence 001111123478888888886432 134899999999999999999999999999999999999865 99
Q ss_pred EEECCcccCCCChHH---HhhhceEEccccc--cc-cccHHHHh----ccCCCcC----CHHHHHHHHHHcCchHHHhhC
Q 048639 945 ILIDGKGIKEYNLRR---LRSQIGLVQQEPL--LF-SCSIRNNI----CYGNEAA----SEAEIVEVSKKANIHDFISSL 1010 (1139)
Q Consensus 945 I~idG~di~~~~l~~---lR~~i~~V~Qdp~--LF-~gTIreNL----~~~~~~~----sd~ei~~al~~~~l~~~i~~l 1010 (1139)
|.++|.||..++.+. +|+++-+|+|||+ |= ..||-+=| ....|.. .++++.+|++.+||+.-...
T Consensus 343 I~F~G~~i~~~~~~~mrplR~~mQvVFQDPygSLsPRmtV~qII~EGL~vh~~~ls~~eR~~rv~~aL~EVGLDp~~r~- 421 (534)
T COG4172 343 IRFDGQDIDGLSRKEMRPLRRRMQVVFQDPYGSLSPRMTVGQIIEEGLRVHEPKLSAAERDQRVIEALEEVGLDPATRN- 421 (534)
T ss_pred EEECCccccccChhhhhhhhhhceEEEeCCCCCCCcccCHHHHhhhhhhhcCCCCCHHHHHHHHHHHHHHcCCChhHhh-
Confidence 999999999998776 6899999999996 21 23444433 3333333 35678999999999764322
Q ss_pred CCCccccccCCCCCCChHHHHHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEe
Q 048639 1011 PDGYDTVVGEKGCQLSGGQKQRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVA 1090 (1139)
Q Consensus 1011 p~gldt~v~e~G~~LSgGQrQrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~Ia 1090 (1139)
.-...||||||||||||||++-+|++++||||||+||.--.++|.+.++++.. +.+-+-++|+
T Consensus 422 ---------RYPhEFSGGQRQRIAIARAliLkP~~i~LDEPTSALD~SVQaQvv~LLr~LQ~--------k~~LsYLFIS 484 (534)
T COG4172 422 ---------RYPHEFSGGQRQRIAIARALILKPELILLDEPTSALDRSVQAQVLDLLRDLQQ--------KHGLSYLFIS 484 (534)
T ss_pred ---------cCCcccCcchhhHHHHHHHHhcCCcEEEecCCchHhhHHHHHHHHHHHHHHHH--------HhCCeEEEEe
Confidence 12346999999999999999999999999999999999999999999987741 3344699999
Q ss_pred cCchhhhc-CCEEEEEeCCEEEEecChhHHhhccCChHHHH
Q 048639 1091 HRLATVIN-SDVIVVMDKGEVVEMGSHSTLVAESQGVYSRL 1130 (1139)
Q Consensus 1091 Hrl~ti~~-~DrI~vl~~G~ive~G~~~eLl~~~~g~f~~l 1130 (1139)
|+|..++. ||+|+||.+|+|||+|+-++++++|+..|.+-
T Consensus 485 HDL~VvrAl~~~viVm~~GkiVE~G~~~~if~~P~~~YT~~ 525 (534)
T COG4172 485 HDLAVVRALCHRVIVMRDGKIVEQGPTEAVFANPQHEYTRA 525 (534)
T ss_pred ccHHHHHHhhceEEEEeCCEEeeeCCHHHHhcCCCcHHHHH
Confidence 99999987 99999999999999999999999999888653
No 69
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.5e-73 Score=685.75 Aligned_cols=454 Identities=24% Similarity=0.373 Sum_probs=351.9
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCH-HHHhcc
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDL-KSLRKN 334 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~-~~~~~~ 334 (1139)
.|+++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. ..++++
T Consensus 4 ~l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 80 (501)
T PRK11288 4 YLSFDGIGKTFPG---VKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPDAGSILIDGQEMRFASTTAALAAG 80 (501)
T ss_pred eEEEeeeEEEECC---EEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHhCC
Confidence 4899999999963 359999999999999999999999999999999999999999999999999865543 456788
Q ss_pred eEEEecCCCCCcc-cHHHHHhcCCCC-----CCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHH
Q 048639 335 IGAVSQEPSLFTG-SLMDNIKVGNMD-----ADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIAR 408 (1139)
Q Consensus 335 i~~v~Q~~~l~~~-ti~~ni~~g~~~-----~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lAR 408 (1139)
|+||+|++.+++. |++||+.++... ....+.. ..+.+.++.+ |++........+||||||||++|||
T Consensus 81 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LSgGq~qrv~lar 153 (501)
T PRK11288 81 VAIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLN-----YEAREQLEHL--GVDIDPDTPLKYLSIGQRQMVEIAK 153 (501)
T ss_pred EEEEEechhccCCCCHHHHHHhcccccccCCCCHHHHH-----HHHHHHHHHc--CCCCCcCCchhhCCHHHHHHHHHHH
Confidence 9999999988875 999999986421 1111111 1233456665 4444456678899999999999999
Q ss_pred HHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhccchH
Q 048639 409 AIVKNPPILLLDEATSALDSESEKLVQEALERAM-QGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQTSDF 486 (1139)
Q Consensus 409 al~~~~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~ 486 (1139)
||+.+|++|||||||++||+.+...+.+.|+++. +|+|+|+|||+++.+.. ||+|++|++|+++..++..+...
T Consensus 154 al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~---- 229 (501)
T PRK11288 154 ALARNARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRMEEIFALCDAITVFKDGRYVATFDDMAQVD---- 229 (501)
T ss_pred HHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCccccCC----
Confidence 9999999999999999999999999999998864 47899999999999876 99999999999975442110000
Q ss_pred HHHHHhhccCCCCCCcCcccccccccccchhhhhhhcccCchhhhhhcccccchhhhcccccchhhHHHHhhchhhHHHH
Q 048639 487 YNRLFTMQNLRPIDDSRTKASTVESTSTEQQISVVEQLEEPEESKRELSASTGQEEVKGKRTTIFFRIWFCLNERELLRL 566 (1139)
Q Consensus 487 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 566 (1139)
.+ . + .
T Consensus 230 ----------------------------------------------------~~--~----------~-~---------- 234 (501)
T PRK11288 230 ----------------------------------------------------RD--Q----------L-V---------- 234 (501)
T ss_pred ----------------------------------------------------HH--H----------H-H----------
Confidence 00 0 0 0
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 567 VVGTVAAAFSGISKPLFGFFIITIGVAYYDPQAKQEVGWYSLAFSLVGLFSLFTHTLQHYFFGVVGEKAMTNLRRTLYTG 646 (1139)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 646 (1139)
+.
T Consensus 235 ------------------------------------------------------------------------------~~ 236 (501)
T PRK11288 235 ------------------------------------------------------------------------------QA 236 (501)
T ss_pred ------------------------------------------------------------------------------HH
Confidence 00
Q ss_pred HHcCCCcccccCCCChhHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Q 048639 647 VLRNEIAWFEKPQNDAGSLTSRIVSDTSMVKAIISDRMSVIVQCISSILIATIVSLVVDWRMALVAWAVMPCHFIGGLIQ 726 (1139)
Q Consensus 647 ll~~~~~ff~~~~~~~G~i~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~~~~~p~~~~~~~~~ 726 (1139)
+ .. .. .
T Consensus 237 ~-------~~--~~-~---------------------------------------------------------------- 242 (501)
T PRK11288 237 M-------VG--RE-I---------------------------------------------------------------- 242 (501)
T ss_pred h-------cC--CC-c----------------------------------------------------------------
Confidence 0 00 00 0
Q ss_pred HHhhhchhhhHHHHHHHHHHHHHHhhcchHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 727 AKSAQGFSGDSAAAHTEFISLTSESASNIRTVASFCHEENILQKAKISLEKTKRSSRKESIKYGVIQGFSLCLWNIAHAV 806 (1139)
Q Consensus 727 ~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 (1139)
T Consensus 243 -------------------------------------------------------------------------------- 242 (501)
T PRK11288 243 -------------------------------------------------------------------------------- 242 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCccccE
Q 048639 807 ALWYTAVLIDKKQATFRDGIRAYQIFSLTVPSITELWTLIPTVISAITVLAPAFEILDRKTEIEPDAPESSESGRIKGRI 886 (1139)
Q Consensus 807 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I 886 (1139)
. ... ... +.. . ....+
T Consensus 243 --------------~---------------------------------------~~~--~~~--~~~-----~--~~~~l 258 (501)
T PRK11288 243 --------------G---------------------------------------DIY--GYR--PRP-----L--GEVRL 258 (501)
T ss_pred --------------c---------------------------------------ccc--ccc--ccC-----C--CCcEE
Confidence 0 000 000 000 0 01148
Q ss_pred EEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCCh-HHHhhhce
Q 048639 887 EFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNL-RRLRSQIG 965 (1139)
Q Consensus 887 ~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l-~~lR~~i~ 965 (1139)
+++|++++ .+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+. +.+|++++
T Consensus 259 ~~~~~~~~-------~~l~~isl~i~~Ge~~~iiG~NGsGKSTLlk~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 331 (501)
T PRK11288 259 RLDGLKGP-------GLREPISFSVRAGEIVGLFGLVGAGRSELMKLLYGATRRTAGQVYLDGKPIDIRSPRDAIRAGIM 331 (501)
T ss_pred EEeccccC-------CcccceeEEEeCCcEEEEEcCCCCCHHHHHHHHcCCCcCCCceEEECCEECCCCCHHHHHhCCCE
Confidence 89999842 38999999999999999999999999999999999999999999999998875433 45678899
Q ss_pred EEccccc---cc-cccHHHHhccCCC-c-----------CCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHH
Q 048639 966 LVQQEPL---LF-SCSIRNNICYGNE-A-----------ASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQ 1029 (1139)
Q Consensus 966 ~V~Qdp~---LF-~gTIreNL~~~~~-~-----------~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQ 1029 (1139)
|+||+|. +| ..|+.+|+.++.. . ..++++.+.++..++.+ +-.++++ ..|||||
T Consensus 332 ~~~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~------~~~~~~~----~~LSgGq 401 (501)
T PRK11288 332 LCPEDRKAEGIIPVHSVADNINISARRHHLRAGCLINNRWEAENADRFIRSLNIKT------PSREQLI----MNLSGGN 401 (501)
T ss_pred EcCcCHhhCCCcCCCCHHHHhccccchhhcccccccChHHHHHHHHHHHHhcCccc------CCccCcc----ccCCHHH
Confidence 9999973 55 4799999976421 0 01134556666665521 1123333 4799999
Q ss_pred HHHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCC
Q 048639 1030 KQRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKG 1108 (1139)
Q Consensus 1030 rQrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G 1108 (1139)
|||++|||||+.+|+||||||||++||+.+.+.+.+.|+++. ..+.|||+|||+++.+.. ||+|++|++|
T Consensus 402 ~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~---------~~g~tviivsHd~~~~~~~~d~i~~l~~g 472 (501)
T PRK11288 402 QQKAILGRWLSEDMKVILLDEPTRGIDVGAKHEIYNVIYELA---------AQGVAVLFVSSDLPEVLGVADRIVVMREG 472 (501)
T ss_pred HHHHHHHHHHccCCCEEEEcCCCCCCCHhHHHHHHHHHHHHH---------hCCCEEEEECCCHHHHHhhCCEEEEEECC
Confidence 999999999999999999999999999999999999998764 334459999999999976 9999999999
Q ss_pred EEEEecChhHHh
Q 048639 1109 EVVEMGSHSTLV 1120 (1139)
Q Consensus 1109 ~ive~G~~~eLl 1120 (1139)
++++.|++++..
T Consensus 473 ~i~~~~~~~~~~ 484 (501)
T PRK11288 473 RIAGELAREQAT 484 (501)
T ss_pred EEEEEEccccCC
Confidence 999999988765
No 70
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=6.6e-73 Score=684.47 Aligned_cols=458 Identities=23% Similarity=0.387 Sum_probs=352.4
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCC--CccEEEECCccCCCCCHHH-Hhc
Q 048639 257 IDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDP--SNGDILIDSLNIKDLDLKS-LRK 333 (1139)
Q Consensus 257 i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~--~~G~i~~~g~~~~~~~~~~-~~~ 333 (1139)
|+++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++| ++|+|.++|+++...+... .++
T Consensus 2 l~i~~l~~~~~~---~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 78 (500)
T TIGR02633 2 LEMKGIVKTFGG---VKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLKASNIRDTERA 78 (500)
T ss_pred EEEEeEEEEeCC---eEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHhC
Confidence 789999999963 4699999999999999999999999999999999999987 7999999999998766544 457
Q ss_pred ceEEEecCCCCCcc-cHHHHHhcCCCC------CCHHHHHHHHHHhcHHHHHHhCCCCCCccc-cccCCCCChHHHHHHH
Q 048639 334 NIGAVSQEPSLFTG-SLMDNIKVGNMD------ADDEQIYNASMMANAHSFISQLPDQYSTEL-GQRGVQLSGGQKQRIA 405 (1139)
Q Consensus 334 ~i~~v~Q~~~l~~~-ti~~ni~~g~~~------~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i-~~~g~~LSgGqkqRi~ 405 (1139)
.++||+|++.++.. |++||+.++... ...++.. ..+.+.++.+ |+.... .....+||||||||++
T Consensus 79 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~~LSgG~~qrv~ 151 (500)
T TIGR02633 79 GIVIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMY-----LRAKNLLREL--QLDADNVTRPVGDYGGGQQQLVE 151 (500)
T ss_pred CEEEEeeccccCCCCcHHHHHHhhccccccccccCHHHHH-----HHHHHHHHHc--CCCCCcccCchhhCCHHHHHHHH
Confidence 89999999988865 999999886421 1111111 1233455555 333222 3457799999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhcc
Q 048639 406 IARAIVKNPPILLLDEATSALDSESEKLVQEALERAM-QGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQT 483 (1139)
Q Consensus 406 lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 483 (1139)
|||||+.+|++|||||||++||+.+...+.+.|+++. +|+|+|+|||+++.+.. ||+|++|++|+++..|+.+++...
T Consensus 152 iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 231 (500)
T TIGR02633 152 IAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLNEVKAVCDTICVIRDGQHVATKDMSTMSED 231 (500)
T ss_pred HHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHHHHHHhCCEEEEEeCCeEeeecCcccCCHH
Confidence 9999999999999999999999999999999998864 47899999999999876 999999999999866533211000
Q ss_pred chHHHHHHhhccCCCCCCcCcccccccccccchhhhhhhcccCchhhhhhcccccchhhhcccccchhhHHHHhhchhhH
Q 048639 484 SDFYNRLFTMQNLRPIDDSRTKASTVESTSTEQQISVVEQLEEPEESKRELSASTGQEEVKGKRTTIFFRIWFCLNEREL 563 (1139)
Q Consensus 484 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 563 (1139)
.. .
T Consensus 232 ---------------------------------------------------------------------~~-~------- 234 (500)
T TIGR02633 232 ---------------------------------------------------------------------DI-I------- 234 (500)
T ss_pred ---------------------------------------------------------------------HH-H-------
Confidence 00 0
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 564 LRLVVGTVAAAFSGISKPLFGFFIITIGVAYYDPQAKQEVGWYSLAFSLVGLFSLFTHTLQHYFFGVVGEKAMTNLRRTL 643 (1139)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 643 (1139)
.
T Consensus 235 ----------------------------~--------------------------------------------------- 235 (500)
T TIGR02633 235 ----------------------------T--------------------------------------------------- 235 (500)
T ss_pred ----------------------------H---------------------------------------------------
Confidence 0
Q ss_pred HHHHHcCCCcccccCCCChhHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Q 048639 644 YTGVLRNEIAWFEKPQNDAGSLTSRIVSDTSMVKAIISDRMSVIVQCISSILIATIVSLVVDWRMALVAWAVMPCHFIGG 723 (1139)
Q Consensus 644 ~~~ll~~~~~ff~~~~~~~G~i~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~~~~~p~~~~~~ 723 (1139)
.. +.+ .
T Consensus 236 --~~-------~~~-~---------------------------------------------------------------- 241 (500)
T TIGR02633 236 --MM-------VGR-E---------------------------------------------------------------- 241 (500)
T ss_pred --HH-------hCc-c----------------------------------------------------------------
Confidence 00 000 0
Q ss_pred HHHHHhhhchhhhHHHHHHHHHHHHHHhhcchHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 724 LIQAKSAQGFSGDSAAAHTEFISLTSESASNIRTVASFCHEENILQKAKISLEKTKRSSRKESIKYGVIQGFSLCLWNIA 803 (1139)
Q Consensus 724 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 803 (1139)
T Consensus 242 -------------------------------------------------------------------------------- 241 (500)
T TIGR02633 242 -------------------------------------------------------------------------------- 241 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCcc
Q 048639 804 HAVALWYTAVLIDKKQATFRDGIRAYQIFSLTVPSITELWTLIPTVISAITVLAPAFEILDRKTEIEPDAPESSESGRIK 883 (1139)
Q Consensus 804 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~ 883 (1139)
.. . ..+.. +. + .. +
T Consensus 242 ----------------~~---------------------------------------~---~~~~~-~~-~----~~--~ 255 (500)
T TIGR02633 242 ----------------IT---------------------------------------S---LYPHE-PH-E----IG--D 255 (500)
T ss_pred ----------------cc---------------------------------------c---ccccc-cc-C----CC--C
Confidence 00 0 00000 00 0 00 1
Q ss_pred ccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccC-CccEEEECCcccCCCCh-HHHh
Q 048639 884 GRIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDP-NEGIILIDGKGIKEYNL-RRLR 961 (1139)
Q Consensus 884 g~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p-~~G~I~idG~di~~~~l-~~lR 961 (1139)
--|+++|++++|+..++.++|+|+||+|++||++||+||||||||||+++|+|+++| ++|+|.++|.++...+. ..+|
T Consensus 256 ~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~~G~i~~~g~~~~~~~~~~~~~ 335 (500)
T TIGR02633 256 VILEARNLTCWDVINPHRKRVDDVSFSLRRGEILGVAGLVGAGRTELVQALFGAYPGKFEGNVFINGKPVDIRNPAQAIR 335 (500)
T ss_pred ceEEEeCCcccccccccccccccceeEEeCCcEEEEeCCCCCCHHHHHHHHhCCCCCCCCeEEEECCEECCCCCHHHHHh
Confidence 148999999999422234699999999999999999999999999999999999995 89999999999865443 4678
Q ss_pred hhceEEcccc---cccc-ccHHHHhccCCC-------cCC----HHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCC
Q 048639 962 SQIGLVQQEP---LLFS-CSIRNNICYGNE-------AAS----EAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLS 1026 (1139)
Q Consensus 962 ~~i~~V~Qdp---~LF~-gTIreNL~~~~~-------~~s----d~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LS 1026 (1139)
++++||||++ .+|. .|+++|+.++.. ... .+++.+++++.++.+ .-.+.++ ..||
T Consensus 336 ~~i~~v~q~~~~~~l~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~------~~~~~~~----~~LS 405 (500)
T TIGR02633 336 AGIAMVPEDRKRHGIVPILGVGKNITLSVLKSFCFKMRIDAAAELQIIGSAIQRLKVKT------ASPFLPI----GRLS 405 (500)
T ss_pred CCCEEcCcchhhCCcCCCCCHHHHhcchhhhhhccCCcCCHHHHHHHHHHHHHhcCccC------CCccCcc----ccCC
Confidence 8999999996 3555 699999986421 011 234566666666521 0123333 4699
Q ss_pred hHHHHHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEE
Q 048639 1027 GGQKQRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVM 1105 (1139)
Q Consensus 1027 gGQrQrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl 1105 (1139)
||||||++|||||+++|++|||||||++||+.+.+.+++.|+++. ..++|||+|||+++.+.. ||||++|
T Consensus 406 gGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~---------~~g~tviivsHd~~~~~~~~d~v~~l 476 (500)
T TIGR02633 406 GGNQQKAVLAKMLLTNPRVLILDEPTRGVDVGAKYEIYKLINQLA---------QEGVAIIVVSSELAEVLGLSDRVLVI 476 (500)
T ss_pred HHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHH---------hCCCEEEEECCCHHHHHHhCCEEEEE
Confidence 999999999999999999999999999999999999999998764 334569999999999976 9999999
Q ss_pred eCCEEEEecChhHH
Q 048639 1106 DKGEVVEMGSHSTL 1119 (1139)
Q Consensus 1106 ~~G~ive~G~~~eL 1119 (1139)
++|+++..++..++
T Consensus 477 ~~G~i~~~~~~~~~ 490 (500)
T TIGR02633 477 GEGKLKGDFVNHAL 490 (500)
T ss_pred ECCEEEEEEccccC
Confidence 99999987765443
No 71
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=100.00 E-value=4.6e-71 Score=674.16 Aligned_cols=442 Identities=26% Similarity=0.356 Sum_probs=399.1
Q ss_pred HcCCcccccccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 21 IGGEVGAFDTDLSTGKVITGVSSHMSVIRDAIGEKLGHFLSSFATFFSGVLIAVICCWEVSLLIFLVVPMILVIGATYTK 100 (1139)
Q Consensus 21 l~~~~~~f~~~~~~G~l~~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~l~~l~~~~~~~~~~~~~~~ 100 (1139)
++.|.++|++. ++|++++|+++|++.+++.+...+..++..++.+++.++++++++|.+++++++.+|+++++..++.+
T Consensus 88 ~~~~~~~~~~~-~~g~~~~~l~~di~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~l~~~~l~~~~~~~~~~ 166 (529)
T TIGR02857 88 AALGPGWLQGR-PSGELATLALEGVEALDGYFARYLPQLVLAVIIPLAILAAVFPADWISGLILLLTAPLIPIFMILIGW 166 (529)
T ss_pred HhCCchhhccC-ChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78899999987 89999999999999999999988888888888888888899999999999998888988888888889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 101 RMNAVSATKLLYLSEATSMIEQTISQIKTVFAFVGERSEIKSFSDCMDKQIIISRGEALIKGVGLGMFQSVTFCCWALII 180 (1139)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (1139)
+.++..++.++..++..+.+.|.++|+++||+|+.|+.+.++|.+..++..+...+..+.......+..++..+..++++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (529)
T TIGR02857 167 AAQAAARKQWAALSRLSGHFLDRLRGLPTLKLFGRAKAQAAAIARSSEEYRERTMRVLRIAFLSSAVLELFATLSVALVA 246 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99888999999999999999999999999999999999999999999888888877777776666666666655555555
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccCCCCccccCCCccEEEE
Q 048639 181 WVGAVVVTAKRSTGGEVLAAVMSILFGAIALTYAAPDMQVFNQAKAAGFEIFQVIQRKPRISYSSKGKELEKIDGNIDIR 260 (1139)
Q Consensus 181 ~~g~~~v~~~~l~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~~~~~~~~~~i~~~ 260 (1139)
+++++.+.+|.+|+|.+++++.+......|+..+...+..++.+..+.+|+.++++.+++.... . .......+.|+++
T Consensus 247 ~~~~~~~~~g~~t~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ll~~~~~~~~~-~-~~~~~~~~~i~~~ 324 (529)
T TIGR02857 247 VYIGFRLLAGDLDLATGLFVLLLAPEFYLPLRQLGADYHARADGVAAAEALFAVLDAPRPLAGK-A-PVTAAPAPSLEFS 324 (529)
T ss_pred HHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCC-c-CCCCCCCCeEEEE
Confidence 6677777799999999999988888888999999999999999999999999999754322111 1 1111112479999
Q ss_pred eEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcceEEEec
Q 048639 261 DVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNIGAVSQ 340 (1139)
Q Consensus 261 ~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q 340 (1139)
||+|+|+++ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.+||+|+++++.+++|++|+||+|
T Consensus 325 ~v~f~y~~~-~~~il~~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~I~~~g~~i~~~~~~~lr~~i~~v~Q 403 (529)
T TIGR02857 325 GLSVAYPGR-RAPALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTEGSIAVNGVPLADADADSWRDQIAWVPQ 403 (529)
T ss_pred EEEEECCCC-CcccccceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEehhhCCHHHHHhheEEEcC
Confidence 999999854 3579999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHccCCCEEEEe
Q 048639 341 EPSLFTGSLMDNIKVGNMDADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVKNPPILLLD 420 (1139)
Q Consensus 341 ~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~~~~illlD 420 (1139)
+|++|++||+|||.++.++.+++++.++++.++++++++++|+|+||.+||+|.+||||||||++||||++++|+|+|||
T Consensus 404 ~~~lf~~ti~~Ni~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~Gldt~v~e~g~~LSgGq~qri~laRal~~~~~ililD 483 (529)
T TIGR02857 404 HPFLFAGTIAENIRLARPDASDAEIRRALERAGLDEFVAALPQGLDTLIGEGGAGLSGGQAQRLALARAFLRDAPLLLLD 483 (529)
T ss_pred CCcccCcCHHHHHhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhccccccCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 99999999999999998888999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhccCEEEEE
Q 048639 421 EATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVNADMIAVV 466 (1139)
Q Consensus 421 Epts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l 466 (1139)
||||+||+++++.+.+.+.+..+++|+|+||||+++++.||+|++|
T Consensus 484 E~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~~l 529 (529)
T TIGR02857 484 EPTAHLDAETEALVTEALRALAQGRTVLLVTHRLALAERADRIVVL 529 (529)
T ss_pred CcccccCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEeC
Confidence 9999999999999999999988899999999999999999999985
No 72
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=7.4e-71 Score=717.94 Aligned_cols=220 Identities=21% Similarity=0.404 Sum_probs=189.6
Q ss_pred ccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcc
Q 048639 255 GNIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKN 334 (1139)
Q Consensus 255 ~~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~ 334 (1139)
..|+++|+++.|+++ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++.. +...+|+.
T Consensus 927 ~~L~I~nLsK~y~~~-~k~aL~~lsl~I~~Gei~aLLG~NGAGKSTLLkiLaGLl~PtsG~I~i~G~dI~~-~~~~~r~~ 1004 (2272)
T TIGR01257 927 PGVCVKNLVKIFEPS-GRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSGTVLVGGKDIET-NLDAVRQS 1004 (2272)
T ss_pred ceEEEEeEEEEecCC-CceEEEeeEEEEcCCcEEEEECCCCChHHHHHHHHhcCCCCCceEEEECCEECcc-hHHHHhhc
Confidence 469999999999632 3569999999999999999999999999999999999999999999999999864 45667889
Q ss_pred eEEEecCCCCCcc-cHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHc
Q 048639 335 IGAVSQEPSLFTG-SLMDNIKVGNM--DADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIV 411 (1139)
Q Consensus 335 i~~v~Q~~~l~~~-ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~ 411 (1139)
+|||||++.+++. |++|||.++.. ....++.. ..+.+.++.+ |++........+||||||||++|||||+
T Consensus 1005 IG~~pQ~~~L~~~LTV~E~L~f~~~lkg~~~~~~~-----~~v~~lL~~v--gL~~~~~~~~~~LSGGqKQRLsLArALi 1077 (2272)
T TIGR01257 1005 LGMCPQHNILFHHLTVAEHILFYAQLKGRSWEEAQ-----LEMEAMLEDT--GLHHKRNEEAQDLSGGMQRKLSVAIAFV 1077 (2272)
T ss_pred EEEEecCCcCCCCCCHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHHHH
Confidence 9999999999875 99999987521 11222211 1233455655 5666677888999999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhcc
Q 048639 412 KNPPILLLDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQT 483 (1139)
Q Consensus 412 ~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 483 (1139)
.+|+|+|||||||+||+.+++.+.+.|+++.+|+|+|++||+++.+.. ||||++|++|++++.|++++|.++
T Consensus 1078 ~~PkVLLLDEPTSGLDp~sr~~l~~lL~~l~~g~TIIltTHdmdea~~laDrI~iL~~GkL~~~Gs~~~Lk~~ 1150 (2272)
T TIGR01257 1078 GDAKVVVLDEPTSGVDPYSRRSIWDLLLKYRSGRTIIMSTHHMDEADLLGDRIAIISQGRLYCSGTPLFLKNC 1150 (2272)
T ss_pred cCCCEEEEECCCcCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHHHh
Confidence 999999999999999999999999999998779999999999999976 999999999999999999988653
No 73
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=2.6e-72 Score=678.23 Aligned_cols=464 Identities=22% Similarity=0.373 Sum_probs=357.1
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHh-cc
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLR-KN 334 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~-~~ 334 (1139)
.|+++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...++ ..
T Consensus 11 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~ 87 (510)
T PRK15439 11 LLCARSISKQYSG---VEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPDSGTLEIGGNPCARLTPAKAHQLG 87 (510)
T ss_pred eEEEEeEEEEeCC---ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHHHhCC
Confidence 5999999999963 4599999999999999999999999999999999999999999999999998877665544 57
Q ss_pred eEEEecCCCCCcc-cHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHccC
Q 048639 335 IGAVSQEPSLFTG-SLMDNIKVGNMDADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVKN 413 (1139)
Q Consensus 335 i~~v~Q~~~l~~~-ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~~ 413 (1139)
++|++|++.++.. |++||+.++.... .+.. ..+.+.++.+ |++........+||||||||++|||||+.+
T Consensus 88 i~~v~q~~~~~~~~tv~e~l~~~~~~~--~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la~aL~~~ 158 (510)
T PRK15439 88 IYLVPQEPLLFPNLSVKENILFGLPKR--QASM-----QKMKQLLAAL--GCQLDLDSSAGSLEVADRQIVEILRGLMRD 158 (510)
T ss_pred EEEEeccCccCCCCcHHHHhhcccccc--hHHH-----HHHHHHHHHc--CCCccccCChhhCCHHHHHHHHHHHHHHcC
Confidence 9999999988875 9999999874321 1111 1223445554 444455677889999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhccchHHHHHH
Q 048639 414 PPILLLDEATSALDSESEKLVQEALERAM-QGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQTSDFYNRLF 491 (1139)
Q Consensus 414 ~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~ 491 (1139)
|++|||||||++||+.+...+.+.|+++. +|+|+|++||+++.+.. ||+|++|++|++++.|+++++.... ....+.
T Consensus 159 p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~-~~~~~~ 237 (510)
T PRK15439 159 SRILILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLPEIRQLADRISVMRDGTIALSGKTADLSTDD-IIQAIT 237 (510)
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecChHHcCHHH-HHHHHh
Confidence 99999999999999999999999998864 47999999999999875 9999999999999988876653210 000000
Q ss_pred hhccCCCCCCcCcccccccccccchhhhhhhcccCchhhhhhcccccchhhhcccccchhhHHHHhhchhhHHHHHHHHH
Q 048639 492 TMQNLRPIDDSRTKASTVESTSTEQQISVVEQLEEPEESKRELSASTGQEEVKGKRTTIFFRIWFCLNERELLRLVVGTV 571 (1139)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 571 (1139)
T Consensus 238 -------------------------------------------------------------------------------- 237 (510)
T PRK15439 238 -------------------------------------------------------------------------------- 237 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Q 048639 572 AAAFSGISKPLFGFFIITIGVAYYDPQAKQEVGWYSLAFSLVGLFSLFTHTLQHYFFGVVGEKAMTNLRRTLYTGVLRNE 651 (1139)
Q Consensus 572 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~~ 651 (1139)
...
T Consensus 238 -----------------------------------------------------------------------------~~~ 240 (510)
T PRK15439 238 -----------------------------------------------------------------------------PAA 240 (510)
T ss_pred -----------------------------------------------------------------------------Ccc
Confidence 000
Q ss_pred CcccccCCCChhHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 048639 652 IAWFEKPQNDAGSLTSRIVSDTSMVKAIISDRMSVIVQCISSILIATIVSLVVDWRMALVAWAVMPCHFIGGLIQAKSAQ 731 (1139)
Q Consensus 652 ~~ff~~~~~~~G~i~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~~~~~p~~~~~~~~~~~~~~ 731 (1139)
. . .+ ..
T Consensus 241 ~---~--~~---------------------------------------------------------------------~~ 246 (510)
T PRK15439 241 R---E--KS---------------------------------------------------------------------LS 246 (510)
T ss_pred c---c--cc---------------------------------------------------------------------cc
Confidence 0 0 00 00
Q ss_pred chhhhHHHHHHHHHHHHHHhhcchHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 732 GFSGDSAAAHTEFISLTSESASNIRTVASFCHEENILQKAKISLEKTKRSSRKESIKYGVIQGFSLCLWNIAHAVALWYT 811 (1139)
Q Consensus 732 ~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (1139)
. . ..
T Consensus 247 ~-~--------------------------------------------~~------------------------------- 250 (510)
T PRK15439 247 A-S--------------------------------------------QK------------------------------- 250 (510)
T ss_pred c-c--------------------------------------------cc-------------------------------
Confidence 0 0 00
Q ss_pred HHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCccccEEEEeE
Q 048639 812 AVLIDKKQATFRDGIRAYQIFSLTVPSITELWTLIPTVISAITVLAPAFEILDRKTEIEPDAPESSESGRIKGRIEFQNI 891 (1139)
Q Consensus 812 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~nv 891 (1139)
. .. ..+.. ... . +. .+-.|+++|+
T Consensus 251 -----------------------------------------------~-~~-~~~~~-~~~---~-~~--~~~~l~~~~l 274 (510)
T PRK15439 251 -----------------------------------------------L-WL-ELPGN-RRQ---Q-AA--GAPVLTVEDL 274 (510)
T ss_pred -----------------------------------------------c-cc-ccccc-ccc---c-CC--CCceEEEeCC
Confidence 0 00 00000 000 0 00 0114899999
Q ss_pred EEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHH-HhhhceEEccc
Q 048639 892 KFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRR-LRSQIGLVQQE 970 (1139)
Q Consensus 892 sf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~-lR~~i~~V~Qd 970 (1139)
+. .+|+|+||+|++||++||+|+||||||||+++|.|+.+|++|+|.++|.++...+... +|++++||||+
T Consensus 275 ~~--------~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~ 346 (510)
T PRK15439 275 TG--------EGFRNISLEVRAGEILGLAGVVGAGRTELAETLYGLRPARGGRIMLNGKEINALSTAQRLARGLVYLPED 346 (510)
T ss_pred CC--------CCccceeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEECCCCCHHHHHhCCcEECCCC
Confidence 83 1599999999999999999999999999999999999999999999999998776654 46789999999
Q ss_pred c---cccc-ccHHHHhccC----CC-----cCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHH
Q 048639 971 P---LLFS-CSIRNNICYG----NE-----AASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIAR 1037 (1139)
Q Consensus 971 p---~LF~-gTIreNL~~~----~~-----~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalAR 1037 (1139)
+ .+|. .|+.+|+... .+ ...++++.++++..++. ++..+.+ ...||||||||++|||
T Consensus 347 ~~~~~l~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~------~~~~~~~----~~~LSgG~kqrl~la~ 416 (510)
T PRK15439 347 RQSSGLYLDAPLAWNVCALTHNRRGFWIKPARENAVLERYRRALNIK------FNHAEQA----ARTLSGGNQQKVLIAK 416 (510)
T ss_pred hhhCCccCCCcHHHHHHhhhhhhhccccChHHHHHHHHHHHHHcCCC------CCCccCc----cccCCcHHHHHHHHHH
Confidence 6 3565 5999998532 01 00122355566666553 0123333 3569999999999999
Q ss_pred HhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEEEecCh
Q 048639 1038 TLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVVEMGSH 1116 (1139)
Q Consensus 1038 ALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~ 1116 (1139)
||+.+|+||||||||++||+.+.+.+.+.|+++. ..++|+|+|||+++.+.+ ||||++|++|+++..|++
T Consensus 417 al~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~---------~~g~tiIivsHd~~~i~~~~d~i~~l~~G~i~~~~~~ 487 (510)
T PRK15439 417 CLEASPQLLIVDEPTRGVDVSARNDIYQLIRSIA---------AQNVAVLFISSDLEEIEQMADRVLVMHQGEISGALTG 487 (510)
T ss_pred HHhhCCCEEEECCCCcCcChhHHHHHHHHHHHHH---------hCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEEcc
Confidence 9999999999999999999999999999999764 234569999999999986 999999999999999999
Q ss_pred hHHhhc
Q 048639 1117 STLVAE 1122 (1139)
Q Consensus 1117 ~eLl~~ 1122 (1139)
+++..+
T Consensus 488 ~~~~~~ 493 (510)
T PRK15439 488 AAINVD 493 (510)
T ss_pred ccCCHH
Confidence 887643
No 74
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=100.00 E-value=5.8e-70 Score=664.52 Aligned_cols=525 Identities=18% Similarity=0.173 Sum_probs=416.1
Q ss_pred hhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 561 RELLRLVVGTVAAAFSGISKPLFGFFIITIGVAYYDPQAKQEVGWYSLAFSLVGLFSLFTHTLQHYFFGVVGEKAMTNLR 640 (1139)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 640 (1139)
+.++.+++++++..+.++.....++++..+++.... ... .....++++.++..++.++..++....+.+...++|
T Consensus 15 ~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~~~--~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR 89 (555)
T TIGR01194 15 PFPAITAFSIALGLAGGLAIIALLASINNAIHEENF--LGQ---GSLFSFGGLCLLALLFRIGADIFPAYAGMHIIANLR 89 (555)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc--ccc---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555566665655555555544444444444321100 000 111223344556667788888889999999999999
Q ss_pred HHHHHHHHcCCCcccccCCCChhHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Q 048639 641 RTLYTGVLRNEIAWFEKPQNDAGSLTSRIVSDTSMVKAIISDRMSVIVQCISSILIATIVSLVVDWRMALVAWAVMPCHF 720 (1139)
Q Consensus 641 ~~l~~~ll~~~~~ff~~~~~~~G~i~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~~~~~p~~~ 720 (1139)
.++|+++++.|++||+ ++++|++++|+++|++.++..+.. +..++..++.++++++++++++|.+++++++.+|+.+
T Consensus 90 ~~l~~~l~~~~~~~~~--~~~~G~l~srl~~Dv~~i~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~L~li~l~~~~~~~ 166 (555)
T TIGR01194 90 IALCEKILGAPIEEID--RRGAHNLIPLLTHDIDQINAFLFI-FPPIAIALAIFFFCIAYLAYLSVPMFAITISAIIIGT 166 (555)
T ss_pred HHHHHHHHcCCHHHHH--hcCcchhhHHHhhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 9999999999999999 678999999999999999998864 6777777888888888899999999999888888877
Q ss_pred HHHHHHHHhhhchhhhHHHHHHHHHHHHHHhhcchHHHHhhcchH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 721 IGGLIQAKSAQGFSGDSAAAHTEFISLTSESASNIRTVASFCHEE--NILQKAKISLEKTKRSSRKESIKYGVIQGFSLC 798 (1139)
Q Consensus 721 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 798 (1139)
+...+..+..++..++.++..++..+.+.|.+.|++++|+|+.++ ...+++.+..++..+...+..........+...
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (555)
T TIGR01194 167 AAQLLAFMGGFKFFHAARDEEDAFNEHTHAIAFGAKELKIHGIRRLSFAHGAIQESANNIADLHIIEILIFIAAENFGQL 246 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhHHHHHhcCHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777666665555566667777888999999999999999999854 456677777766666555444333333333333
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCC--CC--
Q 048639 799 LWNIAHAVALWYTAVLIDKKQATFRDGIRAYQIFSLTVPSITELWTLIPTVISAITVLAPAFEILDRKTEIEPD--AP-- 874 (1139)
Q Consensus 799 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~--~~-- 874 (1139)
+..+...+.++++.+. +.++++.++++..+......|+..+...+..+..+..+.+|+.++++.+.++++. .+
T Consensus 247 ~~~~~~~~~~~~~~~~---~~~t~g~l~a~~~~~~~l~~pi~~l~~~~~~~~~a~~s~~ri~~ll~~~~~~~~~~~~~~~ 323 (555)
T TIGR01194 247 LFFLLIGCALFAAAMF---ASIDAAAISAFVLALLYIKGPLEMLVSALPILAQAQIACQRLADFGERFNEPEPELELSDA 323 (555)
T ss_pred HHHHHHHHHHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccc
Confidence 3333333444444432 6889999999998999999999999999999999999999999997532211110 01
Q ss_pred CCC---CCCCccccEEEEeEEEECCCCC--CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECC
Q 048639 875 ESS---ESGRIKGRIEFQNIKFNYPSRP--EVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDG 949 (1139)
Q Consensus 875 ~~~---~~~~~~g~I~~~nvsf~Y~~~~--~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG 949 (1139)
... ++....+.|+|+||+|+|++.+ ..++|+|+||+|++||++|||||||||||||+++|.|+|+|++|+|.+||
T Consensus 324 ~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~~~l~~vs~~i~~G~~~aivG~sGsGKSTl~~ll~g~~~p~~G~i~~~g 403 (555)
T TIGR01194 324 DNVLLLAHDKSVDSIELKDVHMNPKAPEGSEGFALGPIDLRIAQGDIVFIVGENGCGKSTLAKLFCGLYIPQEGEILLDG 403 (555)
T ss_pred ccccccccCCCCceEEEEEEEEEeCCCCCCcCceeccceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECC
Confidence 000 1112346799999999997532 23699999999999999999999999999999999999999999999999
Q ss_pred cccCCCChHHHhhhceEEccccccccccHHHHhccCCCcCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHH
Q 048639 950 KGIKEYNLRRLRSQIGLVQQEPLLFSCSIRNNICYGNEAASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQ 1029 (1139)
Q Consensus 950 ~di~~~~l~~lR~~i~~V~Qdp~LF~gTIreNL~~~~~~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQ 1029 (1139)
+|+++++.+++|+++++|+|||++|++|+++|+ .++.++++++++++.+++++++.++|+||||. .+|||||
T Consensus 404 ~~i~~~~~~~~~~~i~~v~q~~~lf~~ti~~n~---~~~~~~~~~~~~~~~~~l~~~~~~lp~g~~t~-----~~LSgGq 475 (555)
T TIGR01194 404 AAVSADSRDDYRDLFSAIFADFHLFDDLIGPDE---GEHASLDNAQQYLQRLEIADKVKIEDGGFSTT-----TALSTGQ 475 (555)
T ss_pred EECCCCCHHHHHhhCcEEccChhhhhhhhhccc---ccchhHHHHHHHHHHcCCchhhcccccccCCc-----ccCCHHH
Confidence 999999999999999999999999999999996 35678999999999999999999999999995 6899999
Q ss_pred HHHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHh-hCCCCCCccccCCCeEEEEEecCchhhhcCCEEEEEeCC
Q 048639 1030 KQRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEA-LNPKSSSCGELASRTTQITVAHRLATVINSDVIVVMDKG 1108 (1139)
Q Consensus 1030 rQrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~-~~~~~~~~~~~~~~tTvI~IaHrl~ti~~~DrI~vl~~G 1108 (1139)
||||+||||++++|+|||||||||+||++|++.+++.+.+ .. .+++|+|+||||++++..||+|+||++|
T Consensus 476 ~qRlalaRall~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~---------~~~~tiiiisH~~~~~~~~d~i~~l~~G 546 (555)
T TIGR01194 476 QKRLALICAWLEDRPILLFDEWAADQDPAFKRFFYEELLPDLK---------RQGKTIIIISHDDQYFELADQIIKLAAG 546 (555)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHH---------hCCCEEEEEeccHHHHHhCCEEEEEECC
Confidence 9999999999999999999999999999999999987643 21 2234599999999999999999999999
Q ss_pred EEEEe
Q 048639 1109 EVVEM 1113 (1139)
Q Consensus 1109 ~ive~ 1113 (1139)
+++|.
T Consensus 547 ~i~~~ 551 (555)
T TIGR01194 547 CIVKD 551 (555)
T ss_pred EEEEe
Confidence 99975
No 75
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.1e-72 Score=604.29 Aligned_cols=469 Identities=31% Similarity=0.441 Sum_probs=413.7
Q ss_pred HcCCcccccccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHH
Q 048639 21 IGGEVGAFDTDLSTGKVITGVSSHMSVIRDAIGEKLGHFLSSFATF-FSGVLIAVICCWEVSLLIFLVVPMILVIGATYT 99 (1139)
Q Consensus 21 l~~~~~~f~~~~~~G~l~~~~~~D~~~i~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~l~l~~l~~~~~~~~~~~~~~ 99 (1139)
.++++.|+-+. .+|.+..-+......|+......+...+..++-+ +.++++...++|+.+++.++++.++.++.....
T Consensus 26 ~~Lsl~fHl~r-~TGglsR~ierGtkgI~~i~~~~l~~i~P~~~Ei~l~~vi~~~~~~~~f~~~t~vtv~lY~~ftv~~s 104 (497)
T COG5265 26 HSLSLRFHLER-RTGGLSRAIERGTKGIETILRWILFNILPTLVEISLVAVILWRVYGWWFALTTLVTVILYLLFTVIVS 104 (497)
T ss_pred Hhcchhhhhhc-ccCceeeHhhcCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHHHHhheeeh
Confidence 67888888876 7898888777777777776666666665555433 444555667899999999999888888887777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 100 KRMNAVSATKLLYLSEATSMIEQTISQIKTVFAFVGERSEIKSFSDCMDKQIIISRGEALIKGVGLGMFQSVTFCCWALI 179 (1139)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (1139)
.+.....+...++.+++++...++|-+.++||.|+.|+.+..+|...++.+.+...+...-.++....-..+........
T Consensus 105 ~wr~~~rr~~n~aDs~a~~~aidsLlnfEtvk~F~ne~~e~~r~~~~~~~Y~~a~~k~~~Sl~~Ln~gQ~~I~~~~l~~~ 184 (497)
T COG5265 105 DWRTDFRRLMNNADSDANAKAIDSLLNFETVKYFGNEEYEAVRYDHALETYEKAAIKVHVSLLVLNFGQTAIFSTGLRVM 184 (497)
T ss_pred hhhHHHHHhhhhhhhHHHHHHHHHHhhhhheeecCchhhhhhhcCchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 77777788888899999999999999999999999999999999999999988887766544444444344444445555
Q ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccCCCCcccc-CCCccEE
Q 048639 180 IWVGAVVVTAKRSTGGEVLAAVMSILFGAIALTYAAPDMQVFNQAKAAGFEIFQVIQRKPRISYSSKGKELE-KIDGNID 258 (1139)
Q Consensus 180 ~~~g~~~v~~~~l~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~~~~~-~~~~~i~ 258 (1139)
...+...+..|.+|.|+++....++.+...|+..+......+.+++.-.++.+++++.+.++.+....+... ...+.+.
T Consensus 185 m~~s~~~v~~g~~TvgD~V~~Nall~qls~Plnflg~~Yrei~q~ltdme~mfdLl~~~~~v~d~pda~~L~~~~~g~v~ 264 (497)
T COG5265 185 MTMSALGVEEGQLTVGDLVNVNALLFQLSIPLNFLGFSYREIRQALTDMEKMFDLLDVEAEVSDAPDAPPLWPVRLGAVA 264 (497)
T ss_pred HhhcHHHHhhccCCchhHHhHHHHHhhhhhhhhhhHHHHHHHHHhhhhHHHHHHhhccchhhccCCCCccccccccceEE
Confidence 667778888999999999998889999999999999999999999999999999998766553332222222 3356799
Q ss_pred EEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcceEEE
Q 048639 259 IRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNIGAV 338 (1139)
Q Consensus 259 ~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v 338 (1139)
|+||+|.|.. .+++|+++||++++|+++|+|||||+||||++++|.|+|++++|.|.+||+|+++...+.+|+.||.|
T Consensus 265 F~~V~F~y~~--~r~iL~~isf~i~~g~tvAiVg~SG~gKsTI~rllfRFyD~~sG~I~id~qdir~vtq~slR~aIg~V 342 (497)
T COG5265 265 FINVSFAYDP--RRPILNGISFTIPLGKTVAIVGESGAGKSTILRLLFRFYDVNSGSITIDGQDIRDVTQQSLRRAIGIV 342 (497)
T ss_pred EEEEEeeccc--cchhhcCccccccCccEEEEEeCCCCcHHHHHHHHHHHhCCcCceEEEcchhHHHhHHHHHHHHhCcC
Confidence 9999999974 57899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHccCCCEEE
Q 048639 339 SQEPSLFTGSLMDNIKVGNMDADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVKNPPILL 418 (1139)
Q Consensus 339 ~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~~~~ill 418 (1139)
|||..||++|+..||.+|+|+++++++..+++.++.+++++.+|+||+|.|||+|-.||||||||+||||+++++|+||+
T Consensus 343 PQDtvLFNDti~yni~ygr~~at~eev~aaa~~aqi~~fi~~lP~gy~t~VgerglklSggekqrvaiar~ilk~p~il~ 422 (497)
T COG5265 343 PQDTVLFNDTIAYNIKYGRPDATAEEVGAAAEAAQIHDFIQSLPEGYDTGVGERGLKLSGGEKQRVAIARTILKNPPILI 422 (497)
T ss_pred cccceehhhhHHHHHhccCccccHHHHHHHHHHhhhhHHHHhCchhhhcccchheeeccCchHHHHHHHHHHhcCCCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhccCEEEEEeCcEEEEecChhhhhccchHHHHHHh
Q 048639 419 LDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVNADMIAVVEDGQVTETGTHHSLLQTSDFYNRLFT 492 (1139)
Q Consensus 419 lDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~ 492 (1139)
|||+|||||.+||+.|+..|+...+|+|.++|+||++++.+||.|+||++|+|+|.|+|++|++..|.|+++|.
T Consensus 423 ~deatsaldt~te~~iq~~l~~~~~~rttlviahrlsti~~adeiivl~~g~i~erg~h~~ll~~~g~ya~mw~ 496 (497)
T COG5265 423 LDEATSALDTHTEQAIQAALREVSAGRTTLVIAHRLSTIIDADEIIVLDNGRIVERGTHEELLAAGGLYAEMWR 496 (497)
T ss_pred EehhhhHhhhhHHHHHHHHHHHHhCCCeEEEEeehhhhccCCceEEEeeCCEEEecCcHHHHHHcCChHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999984
No 76
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=2.4e-70 Score=726.15 Aligned_cols=477 Identities=22% Similarity=0.296 Sum_probs=378.7
Q ss_pred HHHHHHHHHHHHH---------HcCCcccccccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhH
Q 048639 8 LSWHPKGNRVLMK---------IGGEVGAFDTDLSTGKVITGVSSHMSVIRDAIGEKLGHFLSSFATFFSGVLIAVICCW 78 (1139)
Q Consensus 8 ~~~~~~~~~~~~~---------l~~~~~~f~~~~~~G~l~~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 78 (1139)
+++...+.+..++ ++.|++||+++ ++|+++||+++|++.+++.+...+..++..++.+++.++++++++|
T Consensus 975 ~~~~~~~~~~~~~L~~~l~~~ll~~p~~ffd~~-~~G~IlnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~~i~i~~~~~ 1053 (1622)
T PLN03130 975 YWLIMSSLYAAKRLHDAMLGSILRAPMSFFHTN-PLGRIINRFAKDLGDIDRNVAVFVNMFLGQIFQLLSTFVLIGIVST 1053 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCHHHhccC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445556666655 89999999997 8999999999999999999999889999988888888888888777
Q ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Q 048639 79 EVSLLIFLVVPM-ILVIGATYTKRMNAVSATKLLYLSEATSMIEQTISQIKTVFAFVGERSEIKSFSDCMDKQIIISRGE 157 (1139)
Q Consensus 79 ~l~l~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~ 157 (1139)
...+ .++.+++ ++.+..++.+..++..+......+...+++.|+++|+++||+|++++.+.+++.+..+...+ .
T Consensus 1054 ~~~~-~~~pl~~~~~~~~~~~~~~~r~~~r~~~~~~s~~~~~~~Etl~Gi~tIraf~~~~~f~~~~~~~~~~~~~----~ 1128 (1622)
T PLN03130 1054 ISLW-AIMPLLVLFYGAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMAEINGRSMDNNIR----F 1128 (1622)
T ss_pred HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHhCCHHHHHhCcHHHHHHHHHHHHHHHHHH----H
Confidence 4332 2222222 22333444455555666666777889999999999999999999998776666555444333 2
Q ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCC---------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 158 ALIKGVGLGMFQSVT-FCCWALIIWVGAVVVTAKR---------STGGEVLAAVMSILFGAIALTYAAPDMQVFNQAKAA 227 (1139)
Q Consensus 158 ~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~v~~~~---------l~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 227 (1139)
.+.......+..+.. .+..+++++.+.+.+..+. .++|.+++ +......++..+......+..+..+
T Consensus 1129 ~~~~~~~~~wl~~~l~~~~~~~i~~~~~~~v~~~~~~~~~~~~~~~~G~~ls---~~~~~~~~l~~l~~~~~~~e~~~~s 1205 (1622)
T PLN03130 1129 TLVNMSSNRWLAIRLETLGGLMIWLTASFAVMQNGRAENQAAFASTMGLLLS---YALNITSLLTAVLRLASLAENSLNA 1205 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccchhhhHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222222222221111 1112222233334344332 22333333 3444445566666667778899999
Q ss_pred HHHHHHHhccCCCCccC-CCCccc--cCCCccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHH
Q 048639 228 GFEIFQVIQRKPRISYS-SKGKEL--EKIDGNIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISL 304 (1139)
Q Consensus 228 ~~ri~~~l~~~~~~~~~-~~~~~~--~~~~~~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~ 304 (1139)
.+|+.++++.+++.+.. ....++ .+.++.|+|+||+|+|+++ .+++|+|+||+|++||++||||+||||||||+++
T Consensus 1206 veRi~e~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~-~~~VL~~is~~I~~GekVaIVGrSGSGKSTLl~l 1284 (1622)
T PLN03130 1206 VERVGTYIDLPSEAPLVIENNRPPPGWPSSGSIKFEDVVLRYRPE-LPPVLHGLSFEISPSEKVGIVGRTGAGKSSMLNA 1284 (1622)
T ss_pred HHHHHHHhCCCCcccccccCCCCCCCCCCCCcEEEEEEEEEeCCC-CCceecceeEEEcCCCEEEEECCCCCCHHHHHHH
Confidence 99999999866543211 111111 1235689999999999643 3579999999999999999999999999999999
Q ss_pred HHhccCCCccEEEECCccCCCCCHHHHhcceEEEecCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCC
Q 048639 305 VARFYDPSNGDILIDSLNIKDLDLKSLRKNIGAVSQEPSLFTGSLMDNIKVGNMDADDEQIYNASMMANAHSFISQLPDQ 384 (1139)
Q Consensus 305 l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g 384 (1139)
|.|+|+|++|+|.+||+|+++++++++|++|++|||||.||+|||||||.+++ +++++++++|++.+++++++.++|+|
T Consensus 1285 L~rl~~p~~G~I~IDG~dI~~i~l~~LR~~IsiVpQdp~LF~GTIreNLd~~~-~~tdeei~~Al~~a~l~~~I~~lp~G 1363 (1622)
T PLN03130 1285 LFRIVELERGRILIDGCDISKFGLMDLRKVLGIIPQAPVLFSGTVRFNLDPFN-EHNDADLWESLERAHLKDVIRRNSLG 1363 (1622)
T ss_pred HhCcCCCCCceEEECCEecccCCHHHHHhccEEECCCCccccccHHHHhCcCC-CCCHHHHHHHHHHcCcHHHHHhCccc
Confidence 99999999999999999999999999999999999999999999999999987 57899999999999999999999999
Q ss_pred CCccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhccCEEE
Q 048639 385 YSTELGQRGVQLSGGQKQRIAIARAIVKNPPILLLDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVNADMIA 464 (1139)
Q Consensus 385 ~~t~i~~~g~~LSgGqkqRi~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~ 464 (1139)
+||.+||+|.+|||||||||||||||+++|+|||||||||+||++|++.|++.|++..+++|+|+||||++++.+||||+
T Consensus 1364 Ldt~Vge~G~nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~~~~TvI~IAHRL~tI~~~DrIl 1443 (1622)
T PLN03130 1364 LDAEVSEAGENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRIL 1443 (1622)
T ss_pred cCccccCCCCCCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEeCChHHHHhCCEEE
Confidence 99999999999999999999999999999999999999999999999999999999888999999999999999999999
Q ss_pred EEeCcEEEEecChhhhhcc-chHHHHHHhhcc
Q 048639 465 VVEDGQVTETGTHHSLLQT-SDFYNRLFTMQN 495 (1139)
Q Consensus 465 ~l~~G~i~~~g~~~~l~~~-~~~~~~~~~~~~ 495 (1139)
||++|+|+|.|+|++|+++ ++.|++++....
T Consensus 1444 VLd~G~IvE~Gt~~eLl~~~~g~f~~L~~~~~ 1475 (1622)
T PLN03130 1444 VLDAGRVVEFDTPENLLSNEGSAFSKMVQSTG 1475 (1622)
T ss_pred EEECCEEEEeCCHHHHHhCCCCHHHHHHHHcC
Confidence 9999999999999999987 689999987654
No 77
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-71 Score=671.86 Aligned_cols=452 Identities=24% Similarity=0.373 Sum_probs=347.9
Q ss_pred EEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCH-HHHhcceEE
Q 048639 259 IRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDL-KSLRKNIGA 337 (1139)
Q Consensus 259 ~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~-~~~~~~i~~ 337 (1139)
++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+. +.++++++|
T Consensus 1 ~~nl~~~~~~---~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~ 77 (491)
T PRK10982 1 MSNISKSFPG---VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKDSGSILFQGKEIDFKSSKEALENGISM 77 (491)
T ss_pred CCceEEEeCC---EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCceEEEECCEECCCCCHHHHHhCCEEE
Confidence 3689999963 469999999999999999999999999999999999999999999999999876544 345678999
Q ss_pred EecCCCCCc-ccHHHHHhcCCCC-----CCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHc
Q 048639 338 VSQEPSLFT-GSLMDNIKVGNMD-----ADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIV 411 (1139)
Q Consensus 338 v~Q~~~l~~-~ti~~ni~~g~~~-----~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~ 411 (1139)
++|++.++. .|++||+.++... ...++.. ..+.+.++.+ |++........+||||||||++|||||+
T Consensus 78 v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LSgGq~qrv~lA~al~ 150 (491)
T PRK10982 78 VHQELNLVLQRSVMDNMWLGRYPTKGMFVDQDKMY-----RDTKAIFDEL--DIDIDPRAKVATLSVSQMQMIEIAKAFS 150 (491)
T ss_pred EecccccccCCCHHHHhhcccccccccccCHHHHH-----HHHHHHHHHc--CCCCCccCchhhCCHHHHHHHHHHHHHH
Confidence 999998775 5999999876421 1112111 1233456665 5555567778899999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhccchHHHH
Q 048639 412 KNPPILLLDEATSALDSESEKLVQEALERAM-QGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQTSDFYNR 489 (1139)
Q Consensus 412 ~~~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~ 489 (1139)
.+|++|||||||++||+.+...+.+.|+++. +++|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 151 ~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~------ 224 (491)
T PRK10982 151 YNAKIVIMDEPTSSLTEKEVNHLFTIIRKLKERGCGIVYISHKMEEIFQLCDEITILRDGQWIATQPLAGLTMD------ 224 (491)
T ss_pred hCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEeecChhhCCHH------
Confidence 9999999999999999999999999998864 47899999999999875 999999999999987765432100
Q ss_pred HHhhccCCCCCCcCcccccccccccchhhhhhhcccCchhhhhhcccccchhhhcccccchhhHHHHhhchhhHHHHHHH
Q 048639 490 LFTMQNLRPIDDSRTKASTVESTSTEQQISVVEQLEEPEESKRELSASTGQEEVKGKRTTIFFRIWFCLNERELLRLVVG 569 (1139)
Q Consensus 490 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 569 (1139)
. . .
T Consensus 225 -----------------------------------------------------~----------~-~------------- 227 (491)
T PRK10982 225 -----------------------------------------------------K----------I-I------------- 227 (491)
T ss_pred -----------------------------------------------------H----------H-H-------------
Confidence 0 0 0
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 048639 570 TVAAAFSGISKPLFGFFIITIGVAYYDPQAKQEVGWYSLAFSLVGLFSLFTHTLQHYFFGVVGEKAMTNLRRTLYTGVLR 649 (1139)
Q Consensus 570 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~ 649 (1139)
+.+
T Consensus 228 ---------------------------------------------------------------------------~~~-- 230 (491)
T PRK10982 228 ---------------------------------------------------------------------------AMM-- 230 (491)
T ss_pred ---------------------------------------------------------------------------HHH--
Confidence 000
Q ss_pred CCCcccccCCCChhHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHh
Q 048639 650 NEIAWFEKPQNDAGSLTSRIVSDTSMVKAIISDRMSVIVQCISSILIATIVSLVVDWRMALVAWAVMPCHFIGGLIQAKS 729 (1139)
Q Consensus 650 ~~~~ff~~~~~~~G~i~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~~~~~p~~~~~~~~~~~~ 729 (1139)
+. ..
T Consensus 231 -----~~--~~--------------------------------------------------------------------- 234 (491)
T PRK10982 231 -----VG--RS--------------------------------------------------------------------- 234 (491)
T ss_pred -----hC--CC---------------------------------------------------------------------
Confidence 00 00
Q ss_pred hhchhhhHHHHHHHHHHHHHHhhcchHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 730 AQGFSGDSAAAHTEFISLTSESASNIRTVASFCHEENILQKAKISLEKTKRSSRKESIKYGVIQGFSLCLWNIAHAVALW 809 (1139)
Q Consensus 730 ~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 (1139)
T Consensus 235 -------------------------------------------------------------------------------- 234 (491)
T PRK10982 235 -------------------------------------------------------------------------------- 234 (491)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCccccEEEE
Q 048639 810 YTAVLIDKKQATFRDGIRAYQIFSLTVPSITELWTLIPTVISAITVLAPAFEILDRKTEIEPDAPESSESGRIKGRIEFQ 889 (1139)
Q Consensus 810 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~ 889 (1139)
. . . ..+.+ ... + ....|+++
T Consensus 235 ----------~------------------------------------~---~--~~~~~--~~~-----~--~~~~i~~~ 254 (491)
T PRK10982 235 ----------L------------------------------------T---Q--RFPDK--ENK-----P--GEVILEVR 254 (491)
T ss_pred ----------c------------------------------------c---c--ccccc--cCC-----C--CCcEEEEe
Confidence 0 0 0 00000 000 0 01248999
Q ss_pred eEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChH-HHhhhceEEc
Q 048639 890 NIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLR-RLRSQIGLVQ 968 (1139)
Q Consensus 890 nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~-~lR~~i~~V~ 968 (1139)
|++++| + ++|+|+||+|++||++||+|+||||||||+++|.|+.+|++|+|.+||.++...+.. .+|+.++|+|
T Consensus 255 ~l~~~~--~---~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~i~~~~ 329 (491)
T PRK10982 255 NLTSLR--Q---PSIRDVSFDLHKGEILGIAGLVGAKRTDIVETLFGIREKSAGTITLHGKKINNHNANEAINHGFALVT 329 (491)
T ss_pred Cccccc--C---cccceeeEEEeCCcEEEEecCCCCCHHHHHHHHcCCCcCCccEEEECCEECCCCCHHHHHHCCCEEcC
Confidence 999975 1 489999999999999999999999999999999999999999999999999876654 4577899999
Q ss_pred cccc---ccc-ccHHHH-----hccCCC--c-CC----HHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHH
Q 048639 969 QEPL---LFS-CSIRNN-----ICYGNE--A-AS----EAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQR 1032 (1139)
Q Consensus 969 Qdp~---LF~-gTIreN-----L~~~~~--~-~s----d~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQr 1032 (1139)
|++. +|. .|+++| +..... . .+ ++++.+.++..++.+ +.++.+ ...||||||||
T Consensus 330 q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~------~~~~~~----~~~LSgGq~qr 399 (491)
T PRK10982 330 EERRSTGIYAYLDIGFNSLISNIRNYKNKVGLLDNSRMKSDTQWVIDSMRVKT------PGHRTQ----IGSLSGGNQQK 399 (491)
T ss_pred CchhhCCcccCCcHHHheehhhhhhhcccccccCcHHHHHHHHHHHHhcCccC------CCcccc----cccCCcHHHHH
Confidence 9963 554 466666 432111 0 11 223444555544421 112333 45799999999
Q ss_pred HHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEE
Q 048639 1033 IAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVV 1111 (1139)
Q Consensus 1033 lalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~iv 1111 (1139)
++||||++++|+||||||||++||+.+.+.+.+.|+++. ..+.|||+|||+++.+.. |||+++|++|+++
T Consensus 400 v~la~al~~~p~illLDEPt~gLD~~~~~~~~~~l~~l~---------~~~~tvi~vsHd~~~~~~~~d~v~~l~~g~i~ 470 (491)
T PRK10982 400 VIIGRWLLTQPEILMLDEPTRGIDVGAKFEIYQLIAELA---------KKDKGIIIISSEMPELLGITDRILVMSNGLVA 470 (491)
T ss_pred HHHHHHHhcCCCEEEEcCCCcccChhHHHHHHHHHHHHH---------HCCCEEEEECCChHHHHhhCCEEEEEECCEEE
Confidence 999999999999999999999999999999999998764 233459999999999976 9999999999999
Q ss_pred EecChhHHh
Q 048639 1112 EMGSHSTLV 1120 (1139)
Q Consensus 1112 e~G~~~eLl 1120 (1139)
..++++++.
T Consensus 471 ~~~~~~~~~ 479 (491)
T PRK10982 471 GIVDTKTTT 479 (491)
T ss_pred EEEccccCC
Confidence 888765443
No 78
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=6e-70 Score=721.78 Aligned_cols=471 Identities=19% Similarity=0.280 Sum_probs=399.6
Q ss_pred HcCCcccccccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 21 IGGEVGAFDTDLSTGKVITGVSSHMSVIRDAIGEKLGHFLSSFATFFSGVLIAVICCWEVSLLIFLVVPMILVIGATYTK 100 (1139)
Q Consensus 21 l~~~~~~f~~~~~~G~l~~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~l~~l~~~~~~~~~~~~~~~ 100 (1139)
++.|++|||++ ++|+++||+++|++.+++.+...+..++..++.+++.++++++.+|.+.++++.++.++..+..++.+
T Consensus 1042 l~~p~~ffd~~-~~G~ilnR~s~Di~~id~~l~~~l~~~~~~~~~~i~~li~~~~~~p~~~~~~i~~~~~~~~i~~~~~~ 1120 (1560)
T PTZ00243 1042 SRGTMSFFDTT-PLGRILNRFSRDIDILDNTLPMSYLYLLQCLFSICSSILVTSASQPFVLVALVPCGYLYYRLMQFYNS 1120 (1560)
T ss_pred HcCChhhccCC-CccHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999997 89999999999999999999999999999998888888888888885544433333334445566677
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 101 RMNAVSATKLLYLSEATSMIEQTISQIKTVFAFVGERSEIKSFSDCMDKQIIISRGEALIKGVGLGMFQSVTFCCWALII 180 (1139)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (1139)
..++..+......+...+++.|+++|+++||+|++|+.+.++|.+..+...+..........+......++..+..+++.
T Consensus 1121 ~~r~~~r~~~~~~s~l~s~~~E~l~G~~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~ 1200 (1560)
T PTZ00243 1121 ANREIRRIKSVAKSPVFTLLEEALQGSATITAYGKAHLVMQEALRRLDVVYSCSYLENVANRWLGVRVEFLSNIVVTVIA 1200 (1560)
T ss_pred HHHHHHHHHHHhhcHHHHHHHHHHcCHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777777778889999999999999999999999999999999888887776665555554444444444444433333
Q ss_pred HHHHHHH--HhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccC--------------
Q 048639 181 WVGAVVV--TAKRSTGGEVLAAVMSILFGAIALTYAAPDMQVFNQAKAAGFEIFQVIQRKPRISYS-------------- 244 (1139)
Q Consensus 181 ~~g~~~v--~~~~l~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~-------------- 244 (1139)
+++.+.. ..+.+++|.+..++.+...+..++..+...+..+..+..+.+|+.++++..|+....
T Consensus 1201 ~~~~~~~~~~~~~~~~g~l~~~l~~a~~l~~~l~~l~~~~~~le~~~~s~eRi~~~~~~~~~e~~~~~~~~~~~~~~~~~ 1280 (1560)
T PTZ00243 1201 LIGVIGTMLRATSQEIGLVSLSLTMAMQTTATLNWLVRQVATVEADMNSVERLLYYTDEVPHEDMPELDEEVDALERRTG 1280 (1560)
T ss_pred HHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccccccccccccc
Confidence 4444433 344578888877777778888899999999999999999999999999643321000
Q ss_pred ------------CC-Cc---cccCCCccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhc
Q 048639 245 ------------SK-GK---ELEKIDGNIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARF 308 (1139)
Q Consensus 245 ------------~~-~~---~~~~~~~~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~ 308 (1139)
.. .. +.....+.|+|+||+|+|++. .+++|+||||+|++||++||||+||||||||+++|+|+
T Consensus 1281 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~f~nVsf~Y~~~-~~~vL~~vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl 1359 (1560)
T PTZ00243 1281 MAADVTGTVVIEPASPTSAAPHPVQAGSLVFEGVQMRYREG-LPLVLRGVSFRIAPREKVGIVGRTGSGKSTLLLTFMRM 1359 (1560)
T ss_pred cccccccccccccCCCcccCCCCCCCCeEEEEEEEEEeCCC-CCceeecceEEECCCCEEEEECCCCCCHHHHHHHHhCC
Confidence 00 00 001124679999999999753 35699999999999999999999999999999999999
Q ss_pred cCCCccEEEECCccCCCCCHHHHhcceEEEecCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCCCcc
Q 048639 309 YDPSNGDILIDSLNIKDLDLKSLRKNIGAVSQEPSLFTGSLMDNIKVGNMDADDEQIYNASMMANAHSFISQLPDQYSTE 388 (1139)
Q Consensus 309 ~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~ 388 (1139)
++|++|+|.+||+|+++++.+++|++|+||||+|.||+|||||||..+. +++++++++|++.+++++++..+|+|+||.
T Consensus 1360 ~~p~~G~I~IDG~di~~i~l~~LR~~I~iVpQdp~LF~gTIreNIdp~~-~~sdeeI~~Al~~a~l~~~I~~lp~Gldt~ 1438 (1560)
T PTZ00243 1360 VEVCGGEIRVNGREIGAYGLRELRRQFSMIPQDPVLFDGTVRQNVDPFL-EASSAEVWAALELVGLRERVASESEGIDSR 1438 (1560)
T ss_pred CCCCCcEEEECCEEcccCCHHHHHhcceEECCCCccccccHHHHhCccc-CCCHHHHHHHHHHCCChHHHhhCccccccc
Confidence 9999999999999999999999999999999999999999999998764 688999999999999999999999999999
Q ss_pred ccccCCCCChHHHHHHHHHHHHccC-CCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhccCEEEEEe
Q 048639 389 LGQRGVQLSGGQKQRIAIARAIVKN-PPILLLDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVNADMIAVVE 467 (1139)
Q Consensus 389 i~~~g~~LSgGqkqRi~lARal~~~-~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~ 467 (1139)
+||+|.+|||||||||||||||+++ |+|||||||||+||+++++.|++.|++..+++|+|+||||++++.+||+|+||+
T Consensus 1439 vge~G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~Iq~~L~~~~~~~TvI~IAHRl~ti~~~DrIlVLd 1518 (1560)
T PTZ00243 1439 VLEGGSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQIQATVMSAFSAYTVITIAHRLHTVAQYDKIIVMD 1518 (1560)
T ss_pred ccCCcCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHHHHHHHHHCCCCEEEEEeccHHHHHhCCEEEEEE
Confidence 9999999999999999999999996 899999999999999999999999999888999999999999999999999999
Q ss_pred CcEEEEecChhhhhcc-chHHHHHHhhc
Q 048639 468 DGQVTETGTHHSLLQT-SDFYNRLFTMQ 494 (1139)
Q Consensus 468 ~G~i~~~g~~~~l~~~-~~~~~~~~~~~ 494 (1139)
+|+|++.|+|+||+++ ++.|++++..+
T Consensus 1519 ~G~VvE~Gt~~eLl~~~~~~f~~l~~~~ 1546 (1560)
T PTZ00243 1519 HGAVAEMGSPRELVMNRQSIFHSMVEAL 1546 (1560)
T ss_pred CCEEEEECCHHHHHhCCCCHHHHHHHHh
Confidence 9999999999999974 78999998654
No 79
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=1.7e-69 Score=660.94 Aligned_cols=444 Identities=23% Similarity=0.345 Sum_probs=397.0
Q ss_pred chhHHHHHHhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 34 TGKVITGVSSHMSVIRDAIGE-KLGHFLSSFATFFSGVLIAVICCWEVSLLIFLVVPMILVIGATYTKRMNAVSATKLLY 112 (1139)
Q Consensus 34 ~G~l~~~~~~D~~~i~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (1139)
.+...+++++|++.+++.+.. .+..++..++.++. ++++++++|.+++++++.+|+++++..++.++.++..++.++.
T Consensus 97 ~~~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~l~li~l~~~~l~~~i~~~~~~~~~~~~~~~~~~ 175 (544)
T TIGR01842 97 GKIDGLQALRDLDQLRQFLTGPGLFAFFDAPWMPIY-LLVCFLLHPWIGILALGGAVVLVGLALLNNRATKKPLKEATEA 175 (544)
T ss_pred ccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH-HHHHHHHhhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 466789999999999998877 44555555554444 4678899999999888888888778888888888888899999
Q ss_pred HHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 048639 113 LSEATSMIEQTISQIKTVFAFVGERSEIKSFSDCMDKQIIISRGEALIKGVGLGMFQSVTFCCWALIIWVGAVVVTAKRS 192 (1139)
Q Consensus 113 ~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~l 192 (1139)
.+++.+.+.|.++|+++||+|+.|+.+.++|.+..++..+...+.....+....+..++..+..++++++|++++.+|.+
T Consensus 176 ~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~g~i 255 (544)
T TIGR01842 176 SIRANNLADSALRNAEVIEAMGMMGNLTKRWGRFHSKYLSAQSAASDRAGMLSNLSKYFRIVLQSLVLGLGAYLAIDGEI 255 (544)
T ss_pred HHHHhhHHHHHHhcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 99999999999999999999999999999999999998888888777777777777676666777788899999999999
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccCCCCccccCCCccEEEEeEEEECCCCCCC
Q 048639 193 TGGEVLAAVMSILFGAIALTYAAPDMQVFNQAKAAGFEIFQVIQRKPRISYSSKGKELEKIDGNIDIRDVCFAYPSRPDQ 272 (1139)
Q Consensus 193 ~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~ 272 (1139)
|+|.+++++.+......|+..+...+..++.+..+.+|+.++++.+++.... ...+..++.++++|++|+|++. ++
T Consensus 256 t~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~---~~~~~~~~~i~~~~v~~~y~~~-~~ 331 (544)
T TIGR01842 256 TPGMMIAGSILVGRALAPIDGAIGGWKQFSGARQAYKRLNELLANYPSRDPA---MPLPEPEGHLSVENVTIVPPGG-KK 331 (544)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCC---CCCCCCCCeEEEEEEEEEcCCC-Cc
Confidence 9999999999998889999999999999999999999999999765442111 1112233579999999999743 35
Q ss_pred ccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcceEEEecCCCCCcccHHHH
Q 048639 273 LILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNIGAVSQEPSLFTGSLMDN 352 (1139)
Q Consensus 273 ~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~n 352 (1139)
++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.+||+++.+++.+++|+.++||||+|++|++|++||
T Consensus 332 ~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~ti~~N 411 (544)
T TIGR01842 332 PTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSGSVRLDGADLKQWDRETFGKHIGYLPQDVELFPGTVAEN 411 (544)
T ss_pred cccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEehhhCCHHHHhhheEEecCCcccccccHHHH
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHH
Q 048639 353 IKVGNMDADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVKNPPILLLDEATSALDSESEK 432 (1139)
Q Consensus 353 i~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~~~~illlDEpts~LD~~~~~ 432 (1139)
|.++.++.++++++++++.++++++++++|+|++|.+|++|.+||||||||++||||++++|++||||||||+||+++++
T Consensus 412 i~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGq~qrl~lARall~~~~ililDEpts~LD~~~~~ 491 (544)
T TIGR01842 412 IARFGENADPEKIIEAAKLAGVHELILRLPDGYDTVIGPGGATLSGGQRQRIALARALYGDPKLVVLDEPNSNLDEEGEQ 491 (544)
T ss_pred HhccCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCCcCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccccCHHHHH
Confidence 99887778899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHc-CCCeEEEEecCccchhccCEEEEEeCcEEEEecChhhhhc
Q 048639 433 LVQEALERAM-QGRTVILIAHRMSTIVNADMIAVVEDGQVTETGTHHSLLQ 482 (1139)
Q Consensus 433 ~i~~~l~~~~-~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~ 482 (1139)
.+.+.+.++. +++|+|+||||++.+..||+|++|++|++++.|+|+++++
T Consensus 492 ~i~~~l~~~~~~~~tvi~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~ 542 (544)
T TIGR01842 492 ALANAIKALKARGITVVVITHRPSLLGCVDKILVLQDGRIARFGERDEVLA 542 (544)
T ss_pred HHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCEEEeeCCHHHHhh
Confidence 9999998875 6899999999999888899999999999999999999864
No 80
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=1.2e-69 Score=720.77 Aligned_cols=482 Identities=20% Similarity=0.273 Sum_probs=380.6
Q ss_pred HHHHHHHHHHHHHH---------HcCCcccccccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHh
Q 048639 7 ILSWHPKGNRVLMK---------IGGEVGAFDTDLSTGKVITGVSSHMSVIRDAIGEKLGHFLSSFATFFSGVLIAVICC 77 (1139)
Q Consensus 7 ~~~~~~~~~~~~~~---------l~~~~~~f~~~~~~G~l~~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 77 (1139)
.+++...+.+.+++ ++.|++||+++ ++|+++||+++|++.+++.+...+..++..++.+++.++++++++
T Consensus 971 ~~~~~~~~~~~~~~lr~~l~~~ll~~p~~ff~~~-~~G~ilnr~s~Di~~id~~l~~~~~~~~~~~~~~i~~~i~~~~~~ 1049 (1495)
T PLN03232 971 SFWLISSSLHAAKRLHDAMLNSILRAPMLFFHTN-PTGRVINRFSKDIGDIDRNVANLMNMFMNQLWQLLSTFALIGTVS 1049 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCeeeeCcC-CchHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455556666555 89999999997 899999999999999999999988888888888888777777776
Q ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Q 048639 78 WEVSLLIFLVVPMIL-VIGATYTKRMNAVSATKLLYLSEATSMIEQTISQIKTVFAFVGERSEIKSFSDCMDKQIIISRG 156 (1139)
Q Consensus 78 ~~l~l~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~ 156 (1139)
+... +.++.+++++ ++..++.+..++..+......+...+++.|+++|+++||+|++++.+.+++.+..+...+....
T Consensus 1050 ~~~~-~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~~~~~~~E~l~G~~tIraf~~~~~~~~~~~~~~~~~~~~~~~ 1128 (1495)
T PLN03232 1050 TISL-WAIMPLLILFYAAYLYYQSTSREVRRLDSVTRSPIYAQFGEALNGLSSIRAYKAYDRMAKINGKSMDNNIRFTLA 1128 (1495)
T ss_pred HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcChHHHhcCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 5332 2222222222 2233333444556666677788899999999999999999999998777666655544433322
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 157 EALIKGVGLGMFQSVTFCCWALIIWVGAVVVTA-KRST-----GGEVLAAVMSILFGAIALTYAAPDMQVFNQAKAAGFE 230 (1139)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~-~~l~-----~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~r 230 (1139)
......+..... ..+..+++++.|.+.+.. +.+. .+.+..++.+......++..+...+..+..+..+.+|
T Consensus 1129 ~~~~~~wl~~~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~eR 1205 (1495)
T PLN03232 1129 NTSSNRWLTIRL---ETLGGVMIWLTATFAVLRNGNAENQAGFASTMGLLLSYTLNITTLLSGVLRQASKAENSLNSVER 1205 (1495)
T ss_pred HHHHHHHHHHHH---HHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 211111111111 111122222333444432 3221 1222223345555666777888888899999999999
Q ss_pred HHHHhccCCCCccC-CCCccc--cCCCccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHh
Q 048639 231 IFQVIQRKPRISYS-SKGKEL--EKIDGNIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVAR 307 (1139)
Q Consensus 231 i~~~l~~~~~~~~~-~~~~~~--~~~~~~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g 307 (1139)
+.++++.+++.... ....++ .+..+.|+|+||+|+|+++ .+++|+|+||+|++||++|||||||||||||+++|+|
T Consensus 1206 i~e~~~~~~e~~~~~~~~~~~~~~p~~g~I~f~nVsf~Y~~~-~~~vL~~isl~I~~GekvaIVG~SGSGKSTL~~lL~r 1284 (1495)
T PLN03232 1206 VGNYIDLPSEATAIIENNRPVSGWPSRGSIKFEDVHLRYRPG-LPPVLHGLSFFVSPSEKVGVVGRTGAGKSSMLNALFR 1284 (1495)
T ss_pred HHHHhcCCccccccccCCCCCCCCCCCCcEEEEEEEEEECCC-CCcccccceEEEcCCCEEEEECCCCCCHHHHHHHHhC
Confidence 99999866543211 111111 1234679999999999643 3579999999999999999999999999999999999
Q ss_pred ccCCCccEEEECCccCCCCCHHHHhcceEEEecCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCCCc
Q 048639 308 FYDPSNGDILIDSLNIKDLDLKSLRKNIGAVSQEPSLFTGSLMDNIKVGNMDADDEQIYNASMMANAHSFISQLPDQYST 387 (1139)
Q Consensus 308 ~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t 387 (1139)
+++|++|+|.+||+|+++++++++|++|+||||||.||+|||||||.+++ ++++++++++++.++++++++++|+|+||
T Consensus 1285 l~~p~~G~I~IdG~di~~i~~~~lR~~i~iVpQdp~LF~gTIr~NL~~~~-~~sdeei~~al~~a~l~~~I~~lp~GLdt 1363 (1495)
T PLN03232 1285 IVELEKGRIMIDDCDVAKFGLTDLRRVLSIIPQSPVLFSGTVRFNIDPFS-EHNDADLWEALERAHIKDVIDRNPFGLDA 1363 (1495)
T ss_pred CCcCCCceEEECCEEhhhCCHHHHHhhcEEECCCCeeeCccHHHHcCCCC-CCCHHHHHHHHHHcCCHHHHHhCcCCCCc
Confidence 99999999999999999999999999999999999999999999999986 68899999999999999999999999999
Q ss_pred cccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhccCEEEEEe
Q 048639 388 ELGQRGVQLSGGQKQRIAIARAIVKNPPILLLDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVNADMIAVVE 467 (1139)
Q Consensus 388 ~i~~~g~~LSgGqkqRi~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~ 467 (1139)
.+||+|.+||||||||+||||||+++|+|||||||||+||++|++.|++.|++..+++|+|+||||++++.+||+|+||+
T Consensus 1364 ~v~e~G~~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~~~~TvI~IAHRl~ti~~~DrIlVL~ 1443 (1495)
T PLN03232 1364 EVSEGGENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEFKSCTMLVIAHRLNTIIDCDKILVLS 1443 (1495)
T ss_pred eecCCCCCCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHhCCEEEEEE
Confidence 99999999999999999999999999999999999999999999999999999888999999999999999999999999
Q ss_pred CcEEEEecChhhhhccc-hHHHHHHhhcc
Q 048639 468 DGQVTETGTHHSLLQTS-DFYNRLFTMQN 495 (1139)
Q Consensus 468 ~G~i~~~g~~~~l~~~~-~~~~~~~~~~~ 495 (1139)
+|+|+|.|+|+||++++ +.|++++..+.
T Consensus 1444 ~G~ivE~Gt~~eLl~~~~~~f~~l~~~~~ 1472 (1495)
T PLN03232 1444 SGQVLEYDSPQELLSRDTSAFFRMVHSTG 1472 (1495)
T ss_pred CCEEEEECCHHHHHhCCCCHHHHHHHHhC
Confidence 99999999999999876 58999987543
No 81
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=5.1e-70 Score=716.40 Aligned_cols=214 Identities=27% Similarity=0.447 Sum_probs=182.4
Q ss_pred cEEEEeEEEECCCCC-CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccc---CCccEEEECCcccCCCChHHH
Q 048639 885 RIEFQNIKFNYPSRP-EVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYD---PNEGIILIDGKGIKEYNLRRL 960 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~-~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~---p~~G~I~idG~di~~~~l~~l 960 (1139)
.++++||+++|+.++ ++++|+|||++|+|||++||+||||||||||+++|.|+.+ |++|+|.+||.++. ..+
T Consensus 759 ~l~~~nl~~~~~~~~~~~~iL~~vs~~i~~Ge~~aI~G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~----~~~ 834 (1394)
T TIGR00956 759 IFHWRNLTYEVKIKKEKRVILNNVDGWVKPGTLTALMGASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLD----SSF 834 (1394)
T ss_pred eEEEEeeEEEecCCCCCcEeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECC----hhh
Confidence 379999999996322 3469999999999999999999999999999999999997 68899999999985 257
Q ss_pred hhhceEEccccc-cccccHHHHhccCC----C-cCCH----HHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHH
Q 048639 961 RSQIGLVQQEPL-LFSCSIRNNICYGN----E-AASE----AEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQK 1030 (1139)
Q Consensus 961 R~~i~~V~Qdp~-LF~gTIreNL~~~~----~-~~sd----~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQr 1030 (1139)
|++++||||++. ++..|+||||.++. | ..++ +.+.++++..++.+ ..|+.+|+.|.+||||||
T Consensus 835 ~~~i~yv~Q~~~~~~~~Tv~E~L~~~a~l~~~~~~~~~~~~~~v~~~l~~l~L~~-------~~d~~v~~~~~~LSgGqr 907 (1394)
T TIGR00956 835 QRSIGYVQQQDLHLPTSTVRESLRFSAYLRQPKSVSKSEKMEYVEEVIKLLEMES-------YADAVVGVPGEGLNVEQR 907 (1394)
T ss_pred hcceeeecccccCCCCCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChh-------hCCCeeCCCCCCCCHHHh
Confidence 899999999875 55689999998641 1 2233 34667788777754 368889988889999999
Q ss_pred HHHHHHHHhcCCCC-EEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhh--hcCCEEEEEeC
Q 048639 1031 QRIAIARTLLKRPA-IMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATV--INSDVIVVMDK 1107 (1139)
Q Consensus 1031 QrlalARALlr~p~-ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti--~~~DrI~vl~~ 1107 (1139)
||++|||||+.+|+ ||+||||||+||+.+...|++.|++.. ++++|||+++|+++.. ..||+|++|++
T Consensus 908 qRl~Ia~aL~~~P~~iLlLDEPTsgLD~~~~~~i~~~L~~la---------~~g~tvI~t~H~~~~~~~~~~D~vl~L~~ 978 (1394)
T TIGR00956 908 KRLTIGVELVAKPKLLLFLDEPTSGLDSQTAWSICKLMRKLA---------DHGQAILCTIHQPSAILFEEFDRLLLLQK 978 (1394)
T ss_pred hHHHHHHHHHcCCCeEEEEcCCCCCCCHHHHHHHHHHHHHHH---------HcCCEEEEEecCCCHHHHHhcCEEEEEcC
Confidence 99999999999997 999999999999999999999999874 3345699999999974 46999999999
Q ss_pred C-EEEEecChhH
Q 048639 1108 G-EVVEMGSHST 1118 (1139)
Q Consensus 1108 G-~ive~G~~~e 1118 (1139)
| +++++|++.+
T Consensus 979 GG~iv~~G~~~~ 990 (1394)
T TIGR00956 979 GGQTVYFGDLGE 990 (1394)
T ss_pred CCEEEEECCccc
Confidence 7 9999999743
No 82
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=5.8e-71 Score=665.81 Aligned_cols=454 Identities=24% Similarity=0.308 Sum_probs=347.0
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcce
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNI 335 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 335 (1139)
.|+++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.+
T Consensus 3 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~~G~i~~~~~~~~~~~~~~~~~~i 79 (490)
T PRK10938 3 SLQISQGTFRLSD---TKTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLLSGERQSQFSHITRLSFEQLQKLV 79 (490)
T ss_pred eEEEEeEEEEcCC---eeecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCceEEECCcccccCCHHHHHHHh
Confidence 3899999999963 3599999999999999999999999999999999999999999999999888766666677789
Q ss_pred EEEecCCCC--C-------cccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHH
Q 048639 336 GAVSQEPSL--F-------TGSLMDNIKVGNMDADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAI 406 (1139)
Q Consensus 336 ~~v~Q~~~l--~-------~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~l 406 (1139)
+|++|++.+ + ..|+++|+.++. ...+++ .+.++.+ |++........+||||||||++|
T Consensus 80 ~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~---------~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~l 146 (490)
T PRK10938 80 SDEWQRNNTDMLSPGEDDTGRTTAEIIQDEV--KDPARC---------EQLAQQF--GITALLDRRFKYLSTGETRKTLL 146 (490)
T ss_pred ceeccCcchhhcccchhhccccHHHhcccch--hHHHHH---------HHHHHHc--CCHhhhhCCcccCCHHHHHHHHH
Confidence 999998753 2 358888876531 011122 2334444 44444566778999999999999
Q ss_pred HHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhccc
Q 048639 407 ARAIVKNPPILLLDEATSALDSESEKLVQEALERAM-QGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQTS 484 (1139)
Q Consensus 407 ARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~ 484 (1139)
||||+.+|++|||||||++||+.+.+.+.+.|+++. +|+|+|++||+++.+.. ||+|++|++|+++..|+++++....
T Consensus 147 a~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~ 226 (490)
T PRK10938 147 CQALMSEPDLLILDEPFDGLDVASRQQLAELLASLHQSGITLVLVLNRFDEIPDFVQFAGVLADCTLAETGEREEILQQA 226 (490)
T ss_pred HHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEeCCHHHHhcch
Confidence 999999999999999999999999999999998864 47899999999999876 9999999999999888766542110
Q ss_pred hHHHHHHhhccCCCCCCcCcccccccccccchhhhhhhcccCchhhhhhcccccchhhhcccccchhhHHHHhhchhhHH
Q 048639 485 DFYNRLFTMQNLRPIDDSRTKASTVESTSTEQQISVVEQLEEPEESKRELSASTGQEEVKGKRTTIFFRIWFCLNERELL 564 (1139)
Q Consensus 485 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 564 (1139)
. ...+.. .
T Consensus 227 ~-~~~~~~-------------------------------------------------------------------~---- 234 (490)
T PRK10938 227 L-VAQLAH-------------------------------------------------------------------S---- 234 (490)
T ss_pred h-hhhhhh-------------------------------------------------------------------h----
Confidence 0 000000 0
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 565 RLVVGTVAAAFSGISKPLFGFFIITIGVAYYDPQAKQEVGWYSLAFSLVGLFSLFTHTLQHYFFGVVGEKAMTNLRRTLY 644 (1139)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 644 (1139)
T Consensus 235 -------------------------------------------------------------------------------- 234 (490)
T PRK10938 235 -------------------------------------------------------------------------------- 234 (490)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHcCCCcccccCCCChhHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Q 048639 645 TGVLRNEIAWFEKPQNDAGSLTSRIVSDTSMVKAIISDRMSVIVQCISSILIATIVSLVVDWRMALVAWAVMPCHFIGGL 724 (1139)
Q Consensus 645 ~~ll~~~~~ff~~~~~~~G~i~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~~~~~p~~~~~~~ 724 (1139)
+ .+ ... ..+
T Consensus 235 ~-----~~--~~~-~~~--------------------------------------------------------------- 243 (490)
T PRK10938 235 E-----QL--EGV-QLP--------------------------------------------------------------- 243 (490)
T ss_pred h-----cc--Ccc-ccC---------------------------------------------------------------
Confidence 0 00 000 000
Q ss_pred HHHHhhhchhhhHHHHHHHHHHHHHHhhcchHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 725 IQAKSAQGFSGDSAAAHTEFISLTSESASNIRTVASFCHEENILQKAKISLEKTKRSSRKESIKYGVIQGFSLCLWNIAH 804 (1139)
Q Consensus 725 ~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 804 (1139)
T Consensus 244 -------------------------------------------------------------------------------- 243 (490)
T PRK10938 244 -------------------------------------------------------------------------------- 243 (490)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCccc
Q 048639 805 AVALWYTAVLIDKKQATFRDGIRAYQIFSLTVPSITELWTLIPTVISAITVLAPAFEILDRKTEIEPDAPESSESGRIKG 884 (1139)
Q Consensus 805 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~g 884 (1139)
...+..... ... ....
T Consensus 244 ------------------------------------------------------------~~~~~~~~~--~~~--~~~~ 259 (490)
T PRK10938 244 ------------------------------------------------------------EPDEPSARH--ALP--ANEP 259 (490)
T ss_pred ------------------------------------------------------------ccccccccc--ccC--CCCc
Confidence 000000000 000 0112
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccC-CccEEEECCcccCC-CChHHHhh
Q 048639 885 RIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDP-NEGIILIDGKGIKE-YNLRRLRS 962 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p-~~G~I~idG~di~~-~~l~~lR~ 962 (1139)
.|+++|++++|++ .++|+|+||+|++||++||+||||||||||+++|.|+.+| ++|+|.++|.++.. .+...+|+
T Consensus 260 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~G~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 336 (490)
T PRK10938 260 RIVLNNGVVSYND---RPILHNLSWQVNPGEHWQIVGPNGAGKSTLLSLITGDHPQGYSNDLTLFGRRRGSGETIWDIKK 336 (490)
T ss_pred eEEEeceEEEECC---eeEEeeceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCcccCCeEEEecccCCCCCCHHHHHh
Confidence 4999999999963 3599999999999999999999999999999999998875 69999999987632 23345788
Q ss_pred hceEEcccccccc---ccHHHHhccCC-------CcC---CHHHHHHHHHHcCchH-HHhhCCCCccccccCCCCCCChH
Q 048639 963 QIGLVQQEPLLFS---CSIRNNICYGN-------EAA---SEAEIVEVSKKANIHD-FISSLPDGYDTVVGEKGCQLSGG 1028 (1139)
Q Consensus 963 ~i~~V~Qdp~LF~---gTIreNL~~~~-------~~~---sd~ei~~al~~~~l~~-~i~~lp~gldt~v~e~G~~LSgG 1028 (1139)
+++|+||++.++. .|+++++.++. ... .++++.++++..++.+ .. +.+ ...||||
T Consensus 337 ~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~----~~~LSgG 405 (490)
T PRK10938 337 HIGYVSSSLHLDYRVSTSVRNVILSGFFDSIGIYQAVSDRQQKLAQQWLDILGIDKRTA-------DAP----FHSLSWG 405 (490)
T ss_pred hceEECHHHHhhcccCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCchhhc-------cCc----hhhCCHH
Confidence 9999999987642 46777764321 001 1245677788887754 32 222 3479999
Q ss_pred HHHHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc--CCEEEEEe
Q 048639 1029 QKQRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN--SDVIVVMD 1106 (1139)
Q Consensus 1029 QrQrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~--~DrI~vl~ 1106 (1139)
||||++|||||+++|+||||||||++||+.+.+.+.+.|++... .+++|||+|||+++.+.. ||+|++|+
T Consensus 406 q~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~L~~l~~--------~~~~tviivsHd~~~~~~~~~d~v~~l~ 477 (490)
T PRK10938 406 QQRLALIVRALVKHPTLLILDEPLQGLDPLNRQLVRRFVDVLIS--------EGETQLLFVSHHAEDAPACITHRLEFVP 477 (490)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHh--------cCCcEEEEEecchhhhhhhhheeEEEec
Confidence 99999999999999999999999999999999999999998641 234569999999999974 79999999
Q ss_pred CCEEEEec
Q 048639 1107 KGEVVEMG 1114 (1139)
Q Consensus 1107 ~G~ive~G 1114 (1139)
+|+|++.-
T Consensus 478 ~G~i~~~~ 485 (490)
T PRK10938 478 DGDIYRYV 485 (490)
T ss_pred CCceEEee
Confidence 99998753
No 83
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=9.2e-69 Score=591.35 Aligned_cols=527 Identities=20% Similarity=0.286 Sum_probs=445.3
Q ss_pred HhhHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccc
Q 048639 576 SGISKPLFGFFIITIGVAYYDPQAKQEVGWYSLAFSLVGLFSLFTHTLQHYFFGVVGEKAMTNLRRTLYTGVLRNEIAWF 655 (1139)
Q Consensus 576 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~~~~ff 655 (1139)
..+.....+.++-++-+.........++.....+.+.+.++..++.+++..+..+.+.+...+++.++|...+++|..--
T Consensus 35 INiL~L~~~lyMLQVyDRVL~S~s~~TLv~Ltvlal~ly~~~glLd~iR~~~l~Rig~~lD~~L~~~v~~a~~~~~l~~~ 114 (580)
T COG4618 35 INLLALTGPLYMLQVYDRVLPSRSVPTLVMLTVLALGLYAFQGLLDAIRSRVLVRIGERLDRQLNGPVFAASFSAPLLRR 114 (580)
T ss_pred HHHHHHhhhHHHHHHHhhhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhhHHhhc
Confidence 33344444455555555544433333333444445556667778889999999999999999999999999987665522
Q ss_pred ccCCCChhHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhhchhh
Q 048639 656 EKPQNDAGSLTSRIVSDTSMVKAIISDRMSVIVQCISSILIATIVSLVVDWRMALVAWAVMPCHFIGGLIQAKSAQGFSG 735 (1139)
Q Consensus 656 ~~~~~~~G~i~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~~~~~p~~~~~~~~~~~~~~~~~~ 735 (1139)
..|+=. .--+|.++++.++...-...+...-.+-+.++++|.+++++.++.++...+++.+.++.....++-.+
T Consensus 115 -----~~g~~~-Q~LrDL~qvR~Fltg~g~~A~fDaPW~P~yl~v~fl~Hp~lG~~a~~ga~iLv~la~ln~~~t~~p~~ 188 (580)
T COG4618 115 -----GSGDGL-QPLRDLDQVRQFLTGTGLTAFFDAPWMPLYLAVIFLFHPWLGLIALAGAIILVVLALLNERATRKPLK 188 (580)
T ss_pred -----CCCccc-cchhhHHHHHHHHcCCCcchhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHH
Confidence 222211 23478899998887643333333333445566677788888888888777777777877777777667
Q ss_pred hHHHHHHHHHHHHHHhhcchHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 736 DSAAAHTEFISLTSESASNIRTVASFCHEENILQKAKISLEKTKRSSRKESIKYGVIQGFSLCLWNIAHAVALWYTAVLI 815 (1139)
Q Consensus 736 ~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 815 (1139)
+..+.......+...+.++.++|++.|+.....++|.+....+...+.+..-..+.+.+++-.+-.+.+..++.+|++++
T Consensus 189 eA~~~~~~~~~~~~a~~RNAEvi~AMGM~~~l~~rW~~~~~~~L~~~~~asd~~~~~~~~Sr~~Rm~lQs~iLg~GA~Lv 268 (580)
T COG4618 189 EASEASIRANQLADATLRNAEVIEAMGMLGNLAKRWGRFNAAYLSAQERASDRNGAFGALSRALRMALQSAVLGLGAWLV 268 (580)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcceeeE
Confidence 77777778889999999999999999999999999998888887777777777777888888888899999999999999
Q ss_pred hcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCccccEEEEeEEEEC
Q 048639 816 DKKQATFRDGIRAYQIFSLTVPSITELWTLIPTVISAITVLAPAFEILDRKTEIEPDAPESSESGRIKGRIEFQNIKFNY 895 (1139)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~nvsf~Y 895 (1139)
..|++|+|.+++...+......|+..++..|.++..+..+..|+.+.+...|+..+. .+.|..+|.+.++++++.-
T Consensus 269 i~ge~t~G~mIA~SIl~gRaLaPid~aI~~Wkq~~~Ar~s~~Rl~~lL~~~p~~~~~----m~LP~P~g~L~Ve~l~~~P 344 (580)
T COG4618 269 IKGEITPGMMIAGSILSGRALAPIDLAIANWKQFVAARQSYKRLNELLAELPAAAER----MPLPAPQGALSVERLTAAP 344 (580)
T ss_pred EcCcCCcchhhHHHHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCC----CCCCCCCceeeEeeeeecC
Confidence 999999999999999999999999999999999999999999999999876654322 2334567899999999977
Q ss_pred CCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhceEEcccccccc
Q 048639 896 PSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQIGLVQQEPLLFS 975 (1139)
Q Consensus 896 ~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~~V~Qdp~LF~ 975 (1139)
|.. ++|+|+|+||.++|||-+||+||||||||||.++|.|.+.|.+|.|.+||-|+++++.+++=++|||.|||..||+
T Consensus 345 Pg~-~~pil~~isF~l~~G~~lgIIGPSgSGKSTLaR~lvG~w~p~~G~VRLDga~l~qWd~e~lG~hiGYLPQdVeLF~ 423 (580)
T COG4618 345 PGQ-KKPILKGISFALQAGEALGIIGPSGSGKSTLARLLVGIWPPTSGSVRLDGADLRQWDREQLGRHIGYLPQDVELFD 423 (580)
T ss_pred CCC-CCcceecceeEecCCceEEEECCCCccHHHHHHHHHcccccCCCcEEecchhhhcCCHHHhccccCcCcccceecC
Confidence 654 5689999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccHHHHhccCCCcCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhcCCCCEEEeeccccCC
Q 048639 976 CSIRNNICYGNEAASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIARTLLKRPAIMLLDEATSAL 1055 (1139)
Q Consensus 976 gTIreNL~~~~~~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalARALlr~p~ILlLDEaTS~L 1055 (1139)
|||+|||.-+.++.+++.|.+|++.++.||.|.++|+||||+|||+|..|||||||||+|||||+.+|++++||||-|||
T Consensus 424 GTIaeNIaRf~~~~d~~kIieAA~lAgvHelIl~lP~GYdT~iG~~G~~LSgGQRQRIaLARAlYG~P~lvVLDEPNsNL 503 (580)
T COG4618 424 GTIAENIARFGEEADPEKVIEAARLAGVHELILRLPQGYDTRIGEGGATLSGGQRQRIALARALYGDPFLVVLDEPNSNL 503 (580)
T ss_pred CcHHHHHHhccccCCHHHHHHHHHHcChHHHHHhCcCCccCccCCCCCCCCchHHHHHHHHHHHcCCCcEEEecCCCCCc
Confidence 99999999887789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhcCCEEEEEeCCEEEEecChhHHhhc
Q 048639 1056 DAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVINSDVIVVMDKGEVVEMGSHSTLVAE 1122 (1139)
Q Consensus 1056 D~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~~DrI~vl~~G~ive~G~~~eLl~~ 1122 (1139)
|.+-|+.+.++|.+.+ +++.|+|+||||++.+..+|+|+||++|++..+|+-+|.+++
T Consensus 504 D~~GE~AL~~Ai~~~k---------~rG~~vvviaHRPs~L~~~Dkilvl~~G~~~~FG~r~eVLa~ 561 (580)
T COG4618 504 DSEGEAALAAAILAAK---------ARGGTVVVIAHRPSALASVDKILVLQDGRIAAFGPREEVLAK 561 (580)
T ss_pred chhHHHHHHHHHHHHH---------HcCCEEEEEecCHHHHhhcceeeeecCChHHhcCCHHHHHHH
Confidence 9999999999999876 444559999999999999999999999999999999999875
No 84
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.2e-69 Score=654.73 Aligned_cols=480 Identities=21% Similarity=0.363 Sum_probs=345.2
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcceE
Q 048639 257 IDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNIG 336 (1139)
Q Consensus 257 i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 336 (1139)
|+++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|. ..|+
T Consensus 2 l~i~~ls~~~~~---~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~~~-----------~~i~ 67 (530)
T PRK15064 2 LSTANITMQFGA---KPLFENISVKFGGGNRYGLIGANGCGKSTFMKILGGDLEPSAGNVSLDPN-----------ERLG 67 (530)
T ss_pred EEEEEEEEEeCC---cEeEeCCEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCC-----------CEEE
Confidence 789999999963 46999999999999999999999999999999999999999999999872 3699
Q ss_pred EEecCCCCCcc-cHHHHHhcCCCCC----------------CHH---HHHHH----------HHHhcHHHHHHhCCCCCC
Q 048639 337 AVSQEPSLFTG-SLMDNIKVGNMDA----------------DDE---QIYNA----------SMMANAHSFISQLPDQYS 386 (1139)
Q Consensus 337 ~v~Q~~~l~~~-ti~~ni~~g~~~~----------------~~~---~~~~~----------~~~~~~~~~i~~l~~g~~ 386 (1139)
|++|++.++.. |++||+.++.... ..+ .+.+. .....+.+.++.+ |++
T Consensus 68 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--gl~ 145 (530)
T PRK15064 68 KLRQDQFAFEEFTVLDTVIMGHTELWEVKQERDRIYALPEMSEEDGMKVADLEVKFAEMDGYTAEARAGELLLGV--GIP 145 (530)
T ss_pred EEeccCCcCCCCcHHHHHHHhhHHHHHHHHHHHHHhcccccccchHHHHHHHHHHHHhcCchhHHHHHHHHHHhC--CCC
Confidence 99999988765 9999998753100 000 00000 0112234455555 443
Q ss_pred ccc-cccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhc-cCEEE
Q 048639 387 TEL-GQRGVQLSGGQKQRIAIARAIVKNPPILLLDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVN-ADMIA 464 (1139)
Q Consensus 387 t~i-~~~g~~LSgGqkqRi~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~ 464 (1139)
... .....+||||||||++|||||+.+|++|||||||++||+.+...+.+.|.+ .+.|||+|||+++.+.. ||+|+
T Consensus 146 ~~~~~~~~~~LSgGq~qrv~lA~aL~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~--~~~tiiivsHd~~~~~~~~d~i~ 223 (530)
T PRK15064 146 EEQHYGLMSEVAPGWKLRVLLAQALFSNPDILLLDEPTNNLDINTIRWLEDVLNE--RNSTMIIISHDRHFLNSVCTHMA 223 (530)
T ss_pred hhHhcCchhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHh--CCCeEEEEeCCHHHHHhhcceEE
Confidence 322 345789999999999999999999999999999999999999999999864 47899999999999876 99999
Q ss_pred EEeCcEEE-EecChhhhhccchHH-HHHHhhccCCCCCCcCcccccccccccchhhhhhhcccCchhhhhhcccccchhh
Q 048639 465 VVEDGQVT-ETGTHHSLLQTSDFY-NRLFTMQNLRPIDDSRTKASTVESTSTEQQISVVEQLEEPEESKRELSASTGQEE 542 (1139)
Q Consensus 465 ~l~~G~i~-~~g~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 542 (1139)
+|++|+++ +.|+++++++..... ..... +
T Consensus 224 ~l~~g~i~~~~g~~~~~~~~~~~~~~~~~~-----------------------------------------------~-- 254 (530)
T PRK15064 224 DLDYGELRVYPGNYDEYMTAATQARERLLA-----------------------------------------------D-- 254 (530)
T ss_pred EEeCCEEEEecCCHHHHHHHHHHHHHHHHH-----------------------------------------------H--
Confidence 99999994 788887764311000 00000 0
Q ss_pred hcccccchhhHHHHhhchhhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHHHHHH
Q 048639 543 VKGKRTTIFFRIWFCLNERELLRLVVGTVAAAFSGISKPLFGFFIITIGVAYYDPQAKQEVGWYSLAFSLVGLFSLFTHT 622 (1139)
Q Consensus 543 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 622 (1139)
. ... .....
T Consensus 255 ~------------~~~-~~~~~---------------------------------------------------------- 263 (530)
T PRK15064 255 N------------AKK-KAQIA---------------------------------------------------------- 263 (530)
T ss_pred H------------HHH-HHHHH----------------------------------------------------------
Confidence 0 000 00000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccCCCChhHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 623 LQHYFFGVVGEKAMTNLRRTLYTGVLRNEIAWFEKPQNDAGSLTSRIVSDTSMVKAIISDRMSVIVQCISSILIATIVSL 702 (1139)
Q Consensus 623 ~~~~~~~~~~~~~~~~l~~~l~~~ll~~~~~ff~~~~~~~G~i~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~ 702 (1139)
+++. ...
T Consensus 264 ---------------~~~~-~~~--------------------------------------------------------- 270 (530)
T PRK15064 264 ---------------ELQS-FVS--------------------------------------------------------- 270 (530)
T ss_pred ---------------HHHH-HHH---------------------------------------------------------
Confidence 0000 000
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHHHHHHhhcchHHHHhhcchHHHHHHHHHHHHHHHHHH
Q 048639 703 VVDWRMALVAWAVMPCHFIGGLIQAKSAQGFSGDSAAAHTEFISLTSESASNIRTVASFCHEENILQKAKISLEKTKRSS 782 (1139)
Q Consensus 703 ~~~~~l~lv~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~ 782 (1139)
+ . .... .+. .....
T Consensus 271 -------------------------~-----------~---------------------~~~~---~~~----~~~~~-- 284 (530)
T PRK15064 271 -------------------------R-----------F---------------------SANA---SKA----KQATS-- 284 (530)
T ss_pred -------------------------H-----------h---------------------hccc---hhh----HHHHH--
Confidence 0 0 0000 000 00000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 783 RKESIKYGVIQGFSLCLWNIAHAVALWYTAVLIDKKQATFRDGIRAYQIFSLTVPSITELWTLIPTVISAITVLAPAFEI 862 (1139)
Q Consensus 783 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~ 862 (1139)
...++.+.
T Consensus 285 ------------------------------------------------------------------------~~~~~~~~ 292 (530)
T PRK15064 285 ------------------------------------------------------------------------RAKQIDKI 292 (530)
T ss_pred ------------------------------------------------------------------------HHHHHhhc
Confidence 00000000
Q ss_pred h--ccCCCCCCCCC-C-CCCCCCccccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccc
Q 048639 863 L--DRKTEIEPDAP-E-SSESGRIKGRIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFY 938 (1139)
Q Consensus 863 ~--~~~~~~~~~~~-~-~~~~~~~~g~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~ 938 (1139)
. ..++....... . .......+..|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|+|++
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~ 369 (530)
T PRK15064 293 KLEEVKPSSRQNPFIRFEQDKKLHRNALEVENLTKGFDN---GPLFKNLNLLLEAGERLAIIGENGVGKTTLLRTLVGEL 369 (530)
T ss_pred cccccCCccccCceeeCCCCCCCCCceEEEEeeEEeeCC---ceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCC
Confidence 0 00000000000 0 0000001235999999999963 35999999999999999999999999999999999999
Q ss_pred cCCccEEEECCcccCCCChHHHhhhceEEccccc--cc-cccHHHHhccCC-CcCCHHHHHHHHHHcCch-HHHhhCCCC
Q 048639 939 DPNEGIILIDGKGIKEYNLRRLRSQIGLVQQEPL--LF-SCSIRNNICYGN-EAASEAEIVEVSKKANIH-DFISSLPDG 1013 (1139)
Q Consensus 939 ~p~~G~I~idG~di~~~~l~~lR~~i~~V~Qdp~--LF-~gTIreNL~~~~-~~~sd~ei~~al~~~~l~-~~i~~lp~g 1013 (1139)
+|++|+|.++|. ++++|+||++. ++ ..|+++|+.... +...++++.++++..++. +...
T Consensus 370 ~p~~G~i~~~~~-----------~~i~~~~q~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~----- 433 (530)
T PRK15064 370 EPDSGTVKWSEN-----------ANIGYYAQDHAYDFENDLTLFDWMSQWRQEGDDEQAVRGTLGRLLFSQDDIK----- 433 (530)
T ss_pred CCCCeEEEECCc-----------eEEEEEcccccccCCCCCcHHHHHHHhccCCccHHHHHHHHHHcCCChhHhc-----
Confidence 999999999872 57999999984 44 369999986432 223456788888888873 3322
Q ss_pred ccccccCCCCCCChHHHHHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCc
Q 048639 1014 YDTVVGEKGCQLSGGQKQRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRL 1093 (1139)
Q Consensus 1014 ldt~v~e~G~~LSgGQrQrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl 1093 (1139)
. ....||||||||++||||++++|+||||||||++||+.+...+.+.|++. ++ |||+|||++
T Consensus 434 --~----~~~~LSgGq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~-----------~~-tvi~vsHd~ 495 (530)
T PRK15064 434 --K----SVKVLSGGEKGRMLFGKLMMQKPNVLVMDEPTNHMDMESIESLNMALEKY-----------EG-TLIFVSHDR 495 (530)
T ss_pred --C----cccccCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHC-----------CC-EEEEEeCCH
Confidence 2 23579999999999999999999999999999999999999999999863 23 599999999
Q ss_pred hhhhc-CCEEEEEeCCEEE-EecChhHHhhc
Q 048639 1094 ATVIN-SDVIVVMDKGEVV-EMGSHSTLVAE 1122 (1139)
Q Consensus 1094 ~ti~~-~DrI~vl~~G~iv-e~G~~~eLl~~ 1122 (1139)
+.+.. ||||++|++|+++ ..|+++++++.
T Consensus 496 ~~~~~~~d~i~~l~~g~i~~~~g~~~~~~~~ 526 (530)
T PRK15064 496 EFVSSLATRIIEITPDGVVDFSGTYEEYLRS 526 (530)
T ss_pred HHHHHhCCEEEEEECCeEEEcCCCHHHHHHH
Confidence 99886 9999999999998 78999998864
No 85
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=1e-67 Score=644.13 Aligned_cols=484 Identities=23% Similarity=0.315 Sum_probs=339.9
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcce
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNI 335 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 335 (1139)
.|+++|++++|++ ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.+++ +.+|
T Consensus 6 ~l~i~~l~~~y~~--~~~il~~vs~~i~~Ge~~~iiG~NGsGKSTLlk~i~G~~~p~~G~i~~~~-----------~~~i 72 (556)
T PRK11819 6 IYTMNRVSKVVPP--KKQILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFEGEARPAP-----------GIKV 72 (556)
T ss_pred EEEEeeEEEEeCC--CCeeeeCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecC-----------CCEE
Confidence 5899999999962 24699999999999999999999999999999999999999999999975 2479
Q ss_pred EEEecCCCCCcc-cHHHHHhcCCCCC----------------CH----------HHHHHHHH-------HhcHHHHHHhC
Q 048639 336 GAVSQEPSLFTG-SLMDNIKVGNMDA----------------DD----------EQIYNASM-------MANAHSFISQL 381 (1139)
Q Consensus 336 ~~v~Q~~~l~~~-ti~~ni~~g~~~~----------------~~----------~~~~~~~~-------~~~~~~~i~~l 381 (1139)
|||+|+|.+++. |++||+.++.... .. .++.+.+. ...+.+.++.+
T Consensus 73 ~~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 152 (556)
T PRK11819 73 GYLPQEPQLDPEKTVRENVEEGVAEVKAALDRFNEIYAAYAEPDADFDALAAEQGELQEIIDAADAWDLDSQLEIAMDAL 152 (556)
T ss_pred EEEecCCCCCCCCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCccchHHHHHHHHHhC
Confidence 999999999875 9999998753100 00 00111111 11223344444
Q ss_pred CCCCCccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhc-c
Q 048639 382 PDQYSTELGQRGVQLSGGQKQRIAIARAIVKNPPILLLDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVN-A 460 (1139)
Q Consensus 382 ~~g~~t~i~~~g~~LSgGqkqRi~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~-~ 460 (1139)
|++ .......+||||||||++|||||+.+|++||||||||+||+.+...+.+.|+++. .|+|+|||+++.+.. |
T Consensus 153 --gl~-~~~~~~~~LSgGqkqrv~la~al~~~p~vlLLDEPt~~LD~~~~~~l~~~L~~~~--~tviiisHd~~~~~~~~ 227 (556)
T PRK11819 153 --RCP-PWDAKVTKLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLEQFLHDYP--GTVVAVTHDRYFLDNVA 227 (556)
T ss_pred --CCC-cccCchhhcCHHHHHHHHHHHHHhCCCCEEEEcCCCCcCChHHHHHHHHHHHhCC--CeEEEEeCCHHHHHhhc
Confidence 332 2466778999999999999999999999999999999999999999999998763 599999999999976 9
Q ss_pred CEEEEEeCcEEE-EecChhhhhccchHHHHHHhhccCCCCCCcCcccccccccccchhhhhhhcccCchhhhhhcccccc
Q 048639 461 DMIAVVEDGQVT-ETGTHHSLLQTSDFYNRLFTMQNLRPIDDSRTKASTVESTSTEQQISVVEQLEEPEESKRELSASTG 539 (1139)
Q Consensus 461 d~i~~l~~G~i~-~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (1139)
|+|++|++|+++ ..|+++++.+....-.... ..
T Consensus 228 d~i~~l~~g~i~~~~g~~~~~~~~~~~~~~~~---------------------------~~------------------- 261 (556)
T PRK11819 228 GWILELDRGRGIPWEGNYSSWLEQKAKRLAQE---------------------------EK------------------- 261 (556)
T ss_pred CeEEEEeCCEEEEecCCHHHHHHHHHHHHHHH---------------------------HH-------------------
Confidence 999999999986 6787776543110000000 00
Q ss_pred hhhhcccccchhhHHHHhhchhhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHHH
Q 048639 540 QEEVKGKRTTIFFRIWFCLNERELLRLVVGTVAAAFSGISKPLFGFFIITIGVAYYDPQAKQEVGWYSLAFSLVGLFSLF 619 (1139)
Q Consensus 540 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (1139)
. . ..
T Consensus 262 ---~-------~----~~-------------------------------------------------------------- 265 (556)
T PRK11819 262 ---Q-------E----AA-------------------------------------------------------------- 265 (556)
T ss_pred ---H-------H----HH--------------------------------------------------------------
Confidence 0 0 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccCCCChhHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 620 THTLQHYFFGVVGEKAMTNLRRTLYTGVLRNEIAWFEKPQNDAGSLTSRIVSDTSMVKAIISDRMSVIVQCISSILIATI 699 (1139)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~~~~ff~~~~~~~G~i~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~ 699 (1139)
.+..+ .+.. .|.+ ..+.+
T Consensus 266 -------------------~~~~~-~~~~----~~~~--~~~~~------------------------------------ 283 (556)
T PRK11819 266 -------------------RQKAL-KREL----EWVR--QSPKA------------------------------------ 283 (556)
T ss_pred -------------------HHHHH-HHHH----HHHH--Hhhhh------------------------------------
Confidence 00000 0000 0000 00000
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHHHHHHhhcchHHHHhhcchHHHHHHHHHHHHHHH
Q 048639 700 VSLVVDWRMALVAWAVMPCHFIGGLIQAKSAQGFSGDSAAAHTEFISLTSESASNIRTVASFCHEENILQKAKISLEKTK 779 (1139)
Q Consensus 700 ~~~~~~~~l~lv~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~ 779 (1139)
+ .. ...
T Consensus 284 -----------------------------------------------------------~----~~-----------~~~ 289 (556)
T PRK11819 284 -----------------------------------------------------------R----QA-----------KSK 289 (556)
T ss_pred -----------------------------------------------------------h----HH-----------HHH
Confidence 0 00 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 780 RSSRKESIKYGVIQGFSLCLWNIAHAVALWYTAVLIDKKQATFRDGIRAYQIFSLTVPSITELWTLIPTVISAITVLAPA 859 (1139)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri 859 (1139)
+ .....++.
T Consensus 290 ~-----------------------------------------------------------------------~~~~~~~~ 298 (556)
T PRK11819 290 A-----------------------------------------------------------------------RLARYEEL 298 (556)
T ss_pred H-----------------------------------------------------------------------HHHHHHHh
Confidence 0 00000000
Q ss_pred HHHhccCCCCCCCCCCCCCCCCccccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccc
Q 048639 860 FEILDRKTEIEPDAPESSESGRIKGRIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYD 939 (1139)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~ 939 (1139)
.+.....+...........+...+..|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~ 375 (556)
T PRK11819 299 LSEEYQKRNETNEIFIPPGPRLGDKVIEAENLSKSFGD---RLLIDDLSFSLPPGGIVGIIGPNGAGKSTLFKMITGQEQ 375 (556)
T ss_pred hcccccccCCCceeecCCCCCCCCeEEEEEeEEEEECC---eeeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC
Confidence 00000000000000000000011235999999999963 359999999999999999999999999999999999999
Q ss_pred CCccEEEECCcccCCCChHHHhhhceEEcccc-cccc-ccHHHHhccCCC----cCCHHHHHHHHHHcCchHHHhhCCCC
Q 048639 940 PNEGIILIDGKGIKEYNLRRLRSQIGLVQQEP-LLFS-CSIRNNICYGNE----AASEAEIVEVSKKANIHDFISSLPDG 1013 (1139)
Q Consensus 940 p~~G~I~idG~di~~~~l~~lR~~i~~V~Qdp-~LF~-gTIreNL~~~~~----~~sd~ei~~al~~~~l~~~i~~lp~g 1013 (1139)
|++|+|.+++ ++ +++|+||++ .++. .|+++|+.++.. ...+.+..++++..++.+. .
T Consensus 376 p~~G~i~~~~-~~----------~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~~~l~~~------~ 438 (556)
T PRK11819 376 PDSGTIKIGE-TV----------KLAYVDQSRDALDPNKTVWEEISGGLDIIKVGNREIPSRAYVGRFNFKGG------D 438 (556)
T ss_pred CCCeEEEECC-ce----------EEEEEeCchhhcCCCCCHHHHHHhhcccccccccHHHHHHHHHhCCCChh------H
Confidence 9999999954 21 599999997 5554 599999986431 1123345566777766321 1
Q ss_pred ccccccCCCCCCChHHHHHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCc
Q 048639 1014 YDTVVGEKGCQLSGGQKQRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRL 1093 (1139)
Q Consensus 1014 ldt~v~e~G~~LSgGQrQrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl 1093 (1139)
.+.. ...||||||||++||||++.+|++|||||||++||+.+...+.+.|++. .+ |+|+|||++
T Consensus 439 ~~~~----~~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~-----------~~-tvi~vtHd~ 502 (556)
T PRK11819 439 QQKK----VGVLSGGERNRLHLAKTLKQGGNVLLLDEPTNDLDVETLRALEEALLEF-----------PG-CAVVISHDR 502 (556)
T ss_pred hcCc----hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC-----------CC-eEEEEECCH
Confidence 1222 3469999999999999999999999999999999999999999999864 23 499999999
Q ss_pred hhhhc-CCEEEEEeC-CEEEE-ecChhHHhhc
Q 048639 1094 ATVIN-SDVIVVMDK-GEVVE-MGSHSTLVAE 1122 (1139)
Q Consensus 1094 ~ti~~-~DrI~vl~~-G~ive-~G~~~eLl~~ 1122 (1139)
+.+.. ||+|++|++ |++.+ .|++++++++
T Consensus 503 ~~~~~~~d~i~~l~~~g~~~~~~g~~~~~~~~ 534 (556)
T PRK11819 503 WFLDRIATHILAFEGDSQVEWFEGNFQEYEED 534 (556)
T ss_pred HHHHHhCCEEEEEECCCeEEEecCCHHHHHHH
Confidence 99876 999999996 88874 6888888754
No 86
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=6.7e-67 Score=693.00 Aligned_cols=467 Identities=20% Similarity=0.303 Sum_probs=385.4
Q ss_pred HcCCcccccccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 21 IGGEVGAFDTDLSTGKVITGVSSHMSVIRDAIGEKLGHFLSSFATFFSGVLIAVICCWEVSLLIFLVVPMILVIGATYTK 100 (1139)
Q Consensus 21 l~~~~~~f~~~~~~G~l~~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~l~~l~~~~~~~~~~~~~~~ 100 (1139)
++.|++||+++ ++|+++||+++|++.+++.+...+..++..++.+++.++++++++|.+++++++++++++++..++.+
T Consensus 969 l~~p~~ff~~~-~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~i~~l~~i~~~~p~l~l~~~~l~~~~~~~~~~~~~ 1047 (1490)
T TIGR01271 969 LQAPMAVLNTM-KAGRILNRFTKDMAIIDDMLPLTLFDFIQLTLIVLGAIFVVSVLQPYIFIAAIPVAVIFIMLRAYFLR 1047 (1490)
T ss_pred HcCCHHHhCCC-ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999997 89999999999999999999999999999999999999988999887765544444444555666666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--H
Q 048639 101 RMNAVSATKLLYLSEATSMIEQTISQIKTVFAFVGERSEIKSFSDCMDKQIIISRGEALIKGVGLGMFQSVTFCCWA--L 178 (1139)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 178 (1139)
..++..+......+.+.+++.|+++|+.+||+|++++.+.+++.+..+...+..........+......++..+..+ +
T Consensus 1048 ~~r~l~~~~~~~~s~l~~~~~Etl~Gl~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~i~~~~~~~~~ 1127 (1490)
T TIGR01271 1048 TSQQLKQLESEARSPIFSHLITSLKGLWTIRAFGRQSYFETLFHKALNLHTANWFLYLSTLRWFQMRIDIIFVFFFIAVT 1127 (1490)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHhcCHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66777777778888999999999999999999999999999999888765443332222222222222222111111 1
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccCCCC-----------
Q 048639 179 IIWVGAVVVTAKRSTGGEVLAAVMSILFGAIALTYAAPDMQVFNQAKAAGFEIFQVIQRKPRISYSSKG----------- 247 (1139)
Q Consensus 179 ~~~~g~~~v~~~~l~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~----------- 247 (1139)
+++++. ...+.|.+..++.+...+..++..+...+..+.....+.+|+.++++.+++.......
T Consensus 1128 ~l~~~~-----~~~~~g~~g~~l~~~~~l~~~l~~l~~~~~~le~~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~~~~~~ 1202 (1490)
T TIGR01271 1128 FIAIGT-----NQDGEGEVGIILTLAMNILSTLQWAVNSSIDVDGLMRSVSRVFKFIDLPQEEPRPSGGGGKYQLSTVLV 1202 (1490)
T ss_pred HHHHHH-----hcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccccccccc
Confidence 112222 2234455444455555566677777777888899999999999999765443211000
Q ss_pred ----ccc--cCCCccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCc
Q 048639 248 ----KEL--EKIDGNIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSL 321 (1139)
Q Consensus 248 ----~~~--~~~~~~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~ 321 (1139)
..+ .+..+.|+|+||+|+|++. .+++|+|+||+|++||++||||+||||||||+++|+|+++ ++|+|.+||+
T Consensus 1203 ~~~~~~~~~wp~~g~I~f~nVs~~Y~~~-~~~vL~~is~~I~~GekvaIvGrSGsGKSTLl~lL~rl~~-~~G~I~IdG~ 1280 (1490)
T TIGR01271 1203 IENPHAQKCWPSGGQMDVQGLTAKYTEA-GRAVLQDLSFSVEGGQRVGLLGRTGSGKSTLLSALLRLLS-TEGEIQIDGV 1280 (1490)
T ss_pred cccCCCCCCCCCCCeEEEEEEEEEeCCC-CcceeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCE
Confidence 000 1234689999999999753 4679999999999999999999999999999999999997 7999999999
Q ss_pred cCCCCCHHHHhcceEEEecCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHH
Q 048639 322 NIKDLDLKSLRKNIGAVSQEPSLFTGSLMDNIKVGNMDADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQK 401 (1139)
Q Consensus 322 ~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqk 401 (1139)
|+.+++.+.+|++|+||||+|.||+|||||||.... ..++++++++++.+++++++.++|+|+||.+||+|.+||||||
T Consensus 1281 di~~i~~~~lR~~is~IpQdp~LF~GTIR~NLdp~~-~~tdeei~~aL~~~~L~~~i~~lp~GLdt~v~e~G~nLSgGQr 1359 (1490)
T TIGR01271 1281 SWNSVTLQTWRKAFGVIPQKVFIFSGTFRKNLDPYE-QWSDEEIWKVAEEVGLKSVIEQFPDKLDFVLVDGGYVLSNGHK 1359 (1490)
T ss_pred EcccCCHHHHHhceEEEeCCCccCccCHHHHhCccc-CCCHHHHHHHHHHCCCHHHHHhCccccccccccCCCcCCHHHH
Confidence 999999999999999999999999999999998654 5789999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhccCEEEEEeCcEEEEecChhhhh
Q 048639 402 QRIAIARAIVKNPPILLLDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVNADMIAVVEDGQVTETGTHHSLL 481 (1139)
Q Consensus 402 qRi~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~ 481 (1139)
||+||||||+++|+|||||||||+||+++++.|++.|++..+++|+|+||||++++..||+|++|++|+|++.|+|++|+
T Consensus 1360 QrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~~~~TvI~IaHRl~ti~~~DrIlvL~~G~ivE~g~p~~Ll 1439 (1490)
T TIGR01271 1360 QLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSFSNCTVILSEHRVEALLECQQFLVIEGSSVKQYDSIQKLL 1439 (1490)
T ss_pred HHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 99999999999999999999999999999999999999988899999999999999999999999999999999999999
Q ss_pred ccchHHHHHHhhccC
Q 048639 482 QTSDFYNRLFTMQNL 496 (1139)
Q Consensus 482 ~~~~~~~~~~~~~~~ 496 (1139)
+.++.|+++++....
T Consensus 1440 ~~~~~f~~l~~~~~~ 1454 (1490)
T TIGR01271 1440 NETSLFKQAMSAADR 1454 (1490)
T ss_pred cCCcHHHHHHHHhCh
Confidence 888999999876543
No 87
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=5.2e-67 Score=638.12 Aligned_cols=483 Identities=23% Similarity=0.327 Sum_probs=338.0
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcce
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNI 335 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 335 (1139)
.++++|++++|++ ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.+++ +..|
T Consensus 4 ~i~~~nls~~~~~--~~~il~~is~~i~~Ge~~~liG~NGsGKSTLl~~i~G~~~p~~G~i~~~~-----------~~~i 70 (552)
T TIGR03719 4 IYTMNRVSKVVPP--KKEILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFNGEARPAP-----------GIKV 70 (552)
T ss_pred EEEEeeEEEecCC--CCeeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecC-----------CCEE
Confidence 4899999999962 24699999999999999999999999999999999999999999999975 2479
Q ss_pred EEEecCCCCCcc-cHHHHHhcCCCC-----------------CCH---------HHHHHHHHHhc-------HHHHHHhC
Q 048639 336 GAVSQEPSLFTG-SLMDNIKVGNMD-----------------ADD---------EQIYNASMMAN-------AHSFISQL 381 (1139)
Q Consensus 336 ~~v~Q~~~l~~~-ti~~ni~~g~~~-----------------~~~---------~~~~~~~~~~~-------~~~~i~~l 381 (1139)
+||+|+|++++. |++||+.++... ... .++.+++...+ +.+.++.+
T Consensus 71 ~~v~Q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 150 (552)
T TIGR03719 71 GYLPQEPQLDPTKTVRENVEEGVAEIKDALDRFNEISAKFAEPDADMDALLAEQAELQEIIDAADAWDLDRKLEIAMDAL 150 (552)
T ss_pred EEEeccCCCCCCCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCcchhHHHHHHHHhhC
Confidence 999999998864 999999875310 000 11222221111 22334444
Q ss_pred CCCCCccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhc-c
Q 048639 382 PDQYSTELGQRGVQLSGGQKQRIAIARAIVKNPPILLLDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVN-A 460 (1139)
Q Consensus 382 ~~g~~t~i~~~g~~LSgGqkqRi~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~-~ 460 (1139)
|++ .......+||||||||++|||||+.+|++|||||||++||+.+...+.+.|++. +.|+|+|||+++.+.. |
T Consensus 151 --~l~-~~~~~~~~LSgGqkqrv~la~al~~~p~lLLLDEPt~~LD~~~~~~l~~~L~~~--~~tvIiisHd~~~~~~~~ 225 (552)
T TIGR03719 151 --RCP-PWDADVTKLSGGERRRVALCRLLLSKPDMLLLDEPTNHLDAESVAWLEQHLQEY--PGTVVAVTHDRYFLDNVA 225 (552)
T ss_pred --CCC-cccCchhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCChHHHHHHHHHHHhC--CCeEEEEeCCHHHHHhhc
Confidence 332 235677899999999999999999999999999999999999999999999876 3699999999999976 9
Q ss_pred CEEEEEeCcEEE-EecChhhhhccchHHHHHHhhccCCCCCCcCcccccccccccchhhhhhhcccCchhhhhhcccccc
Q 048639 461 DMIAVVEDGQVT-ETGTHHSLLQTSDFYNRLFTMQNLRPIDDSRTKASTVESTSTEQQISVVEQLEEPEESKRELSASTG 539 (1139)
Q Consensus 461 d~i~~l~~G~i~-~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (1139)
|++++|++|+++ ..|+++++.+.... ... .. ..
T Consensus 226 d~v~~l~~g~i~~~~g~~~~~~~~~~~---~~~---------------------------~~---------~~------- 259 (552)
T TIGR03719 226 GWILELDRGRGIPWEGNYSSWLEQKEK---RLE---------------------------QE---------EK------- 259 (552)
T ss_pred CeEEEEECCEEEEecCCHHHHHHHHHH---HHH---------------------------HH---------HH-------
Confidence 999999999976 67887766431000 000 00 00
Q ss_pred hhhhcccccchhhHHHHhhchhhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHHH
Q 048639 540 QEEVKGKRTTIFFRIWFCLNERELLRLVVGTVAAAFSGISKPLFGFFIITIGVAYYDPQAKQEVGWYSLAFSLVGLFSLF 619 (1139)
Q Consensus 540 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (1139)
+ . ..
T Consensus 260 ~----------~----~~-------------------------------------------------------------- 263 (552)
T TIGR03719 260 E----------E----SA-------------------------------------------------------------- 263 (552)
T ss_pred H----------H----HH--------------------------------------------------------------
Confidence 0 0 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccCCCChhHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 620 THTLQHYFFGVVGEKAMTNLRRTLYTGVLRNEIAWFEKPQNDAGSLTSRIVSDTSMVKAIISDRMSVIVQCISSILIATI 699 (1139)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~~~~ff~~~~~~~G~i~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~ 699 (1139)
....+. +....+ . ..+.+
T Consensus 264 ---------------~~~~~~-~~~~~~--------~--~~~~~------------------------------------ 281 (552)
T TIGR03719 264 ---------------RQKALK-RELEWV--------R--SSPKA------------------------------------ 281 (552)
T ss_pred ---------------HHHHHH-HHHHHH--------H--hhhhh------------------------------------
Confidence 000000 000000 0 00000
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHHHHHHhhcchHHHHhhcchHHHHHHHHHHHHHHH
Q 048639 700 VSLVVDWRMALVAWAVMPCHFIGGLIQAKSAQGFSGDSAAAHTEFISLTSESASNIRTVASFCHEENILQKAKISLEKTK 779 (1139)
Q Consensus 700 ~~~~~~~~l~lv~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~ 779 (1139)
. +. ..
T Consensus 282 ----------------------------------~-----------------------------~~-----------~~- 286 (552)
T TIGR03719 282 ----------------------------------R-----------------------------QA-----------KS- 286 (552)
T ss_pred ----------------------------------H-----------------------------HH-----------HH-
Confidence 0 00 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 780 RSSRKESIKYGVIQGFSLCLWNIAHAVALWYTAVLIDKKQATFRDGIRAYQIFSLTVPSITELWTLIPTVISAITVLAPA 859 (1139)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri 859 (1139)
+. .....++.
T Consensus 287 ~~----------------------------------------------------------------------~~~~~~~~ 296 (552)
T TIGR03719 287 KA----------------------------------------------------------------------RLARYEEL 296 (552)
T ss_pred HH----------------------------------------------------------------------HHHHHHhh
Confidence 00 00000000
Q ss_pred HHH-hccCCCCCCCCCCCCCCCCccccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccc
Q 048639 860 FEI-LDRKTEIEPDAPESSESGRIKGRIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFY 938 (1139)
Q Consensus 860 ~~~-~~~~~~~~~~~~~~~~~~~~~g~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~ 938 (1139)
.+. ....++....... ..+...+..|+++|++++|++ .++|+|+||+|++||++||+||||||||||+++|.|+.
T Consensus 297 ~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~ 372 (552)
T TIGR03719 297 LSQEFQKRNETAEIYIP-PGPRLGDKVIEAENLSKGFGD---KLLIDDLSFKLPPGGIVGVIGPNGAGKSTLFRMITGQE 372 (552)
T ss_pred hhhcccccCCCceeecC-CCCCCCCeEEEEeeEEEEECC---eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHcCCC
Confidence 000 0000000000000 000001235999999999963 35999999999999999999999999999999999999
Q ss_pred cCCccEEEECCcccCCCChHHHhhhceEEccccc-cc-cccHHHHhccCCCc--C--CHHHHHHHHHHcCchHHHhhCCC
Q 048639 939 DPNEGIILIDGKGIKEYNLRRLRSQIGLVQQEPL-LF-SCSIRNNICYGNEA--A--SEAEIVEVSKKANIHDFISSLPD 1012 (1139)
Q Consensus 939 ~p~~G~I~idG~di~~~~l~~lR~~i~~V~Qdp~-LF-~gTIreNL~~~~~~--~--sd~ei~~al~~~~l~~~i~~lp~ 1012 (1139)
+|++|+|.+++ ++ +++|+||++. ++ ..|+++|+.++... . .+.+..++++..++.+..
T Consensus 373 ~p~~G~i~~~~-~~----------~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~~~l~~~~----- 436 (552)
T TIGR03719 373 QPDSGTIKIGE-TV----------KLAYVDQSRDALDPNKTVWEEISGGLDIIQLGKREVPSRAYVGRFNFKGSD----- 436 (552)
T ss_pred CCCCeEEEECC-ce----------EEEEEeCCccccCCCCcHHHHHHhhccccccCcchHHHHHHHHhCCCChhH-----
Confidence 99999999954 21 5999999973 55 45999999875321 1 133455666666663211
Q ss_pred CccccccCCCCCCChHHHHHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecC
Q 048639 1013 GYDTVVGEKGCQLSGGQKQRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHR 1092 (1139)
Q Consensus 1013 gldt~v~e~G~~LSgGQrQrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHr 1092 (1139)
.+. ....||||||||++|||||+.+|++|||||||++||+.+...+.+.|++.. + |||+|||+
T Consensus 437 -~~~----~~~~LSgGe~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-----------~-~viivsHd 499 (552)
T TIGR03719 437 -QQK----KVGQLSGGERNRVHLAKTLKSGGNVLLLDEPTNDLDVETLRALEEALLEFA-----------G-CAVVISHD 499 (552)
T ss_pred -hcC----chhhCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHCC-----------C-eEEEEeCC
Confidence 122 235799999999999999999999999999999999999999999998642 3 49999999
Q ss_pred chhhhc-CCEEEEEeC-CEEEE-ecChhHHhhc
Q 048639 1093 LATVIN-SDVIVVMDK-GEVVE-MGSHSTLVAE 1122 (1139)
Q Consensus 1093 l~ti~~-~DrI~vl~~-G~ive-~G~~~eLl~~ 1122 (1139)
++.+.. ||+|++|++ |++++ .|+++++.+.
T Consensus 500 ~~~~~~~~d~i~~l~~~~~~~~~~g~~~~~~~~ 532 (552)
T TIGR03719 500 RWFLDRIATHILAFEGDSHVEWFEGNYSEYEED 532 (552)
T ss_pred HHHHHHhCCEEEEEECCCeEEEeCCCHHHHHHH
Confidence 999886 999999997 68874 4788777643
No 88
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=5.8e-67 Score=654.20 Aligned_cols=465 Identities=22% Similarity=0.334 Sum_probs=397.1
Q ss_pred HcCCcccccccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 21 IGGEVGAFDTDLSTGKVITGVSSHMSVIRDAIGEKLGHFLSSFATFFSGVLIAVICCWEVSLLIFLVVPMILVIGATYTK 100 (1139)
Q Consensus 21 l~~~~~~f~~~~~~G~l~~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~l~~l~~~~~~~~~~~~~~~ 100 (1139)
+|.|++|||++ ++|+|+||+++|++.+++.++..+..++..++.+++.++++.+..|.+.++++.+.+++..+..++.+
T Consensus 902 lrapm~FFdtT-P~GRILNRFSkD~~~vD~~Lp~~~~~~~~~~~~~l~~~~vi~~~~P~fli~~~pl~v~~~~~~~~Y~~ 980 (1381)
T KOG0054|consen 902 LRAPMSFFDTT-PTGRILNRFSKDIDTVDVLLPFTLEFFLQSLLNVLGILVVISYVTPWFLIAIIPLGVIYYFVQRYYLA 980 (1381)
T ss_pred HhCcchhcCCC-CccchhhhcccchHHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999997 89999999999999999999999999999999999999999999998888887777778888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 101 RMNAVSATKLLYLSEATSMIEQTISQIKTVFAFVGERSEIKSFSDCMDKQIIISRGEALIKGVGLGMFQSVTFCCWALII 180 (1139)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (1139)
..+...+-....++...+++.|+++|+.|||+|+.|++|.+++....+...+...-.....-+...-+.++..+...
T Consensus 981 tsReLkRLesitRSPi~sh~~Etl~GlsTIRAf~~~~rf~~~~~~~~D~~~~~~f~~~~a~RWla~Rle~ig~~~v~--- 1057 (1381)
T KOG0054|consen 981 TSRELKRLESITRSPIYSHFSETLQGLSTIRAFGKEERFIQENDELIDENSRAFFLSISANRWLAVRLELLGNLVVL--- 1057 (1381)
T ss_pred HhHHHHHhhhcccchHHHhHHHHhcCcceeeeccccHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH---
Confidence 88888888888899999999999999999999999999999998887776554433222111111122222222221
Q ss_pred HHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCc---cCCCCccccCCCc
Q 048639 181 WVGAVVVTA--KRSTGGEVLAAVMSILFGAIALTYAAPDMQVFNQAKAAGFEIFQVIQRKPRIS---YSSKGKELEKIDG 255 (1139)
Q Consensus 181 ~~g~~~v~~--~~l~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~---~~~~~~~~~~~~~ 255 (1139)
..+...+.. +..++|.+=-.+.|.+.+...+..+......+..-..|.+|+.++.+.+++.+ ....+++..+.+|
T Consensus 1058 ~~al~~vl~~~~~~~~g~vGLslsyal~lt~~l~~~vR~~~elEn~m~SVERv~eY~~~~~E~p~~~~~~~pp~~WP~~G 1137 (1381)
T KOG0054|consen 1058 IAALFAVLLPSGLISPGLVGLSLSYALQLTGLLQWLVRQSSELENNMVSVERVLEYTDIPSEAPLEIEESRPPPSWPSKG 1137 (1381)
T ss_pred HHHHHHHHccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhHHHHHhcCCCCCCCCCcCCCCCCCCCCCC
Confidence 122222222 22667777666778887777777777888888889999999999998655521 1111222234578
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcce
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNI 335 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 335 (1139)
.|+|+|++.+|..+ .++|||||||+|+|||++||||++|||||||+++|.|+.+|.+|+|.|||.|+.++.++++|+++
T Consensus 1138 ~I~f~~~~~RYrp~-lp~VLk~is~~I~p~eKVGIVGRTGaGKSSL~~aLFRl~e~~~G~I~IDgvdI~~igL~dLRsrl 1216 (1381)
T KOG0054|consen 1138 EIEFEDLSLRYRPN-LPLVLKGISFTIKPGEKVGIVGRTGAGKSSLILALFRLVEPAEGEILIDGVDISKIGLHDLRSRL 1216 (1381)
T ss_pred eEEEEEeEEEeCCC-CcchhcCceEEEcCCceEEEeCCCCCCHHHHHHHHHHhcCccCCeEEEcCeecccccHHHHHhcC
Confidence 99999999999754 46899999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHccCCC
Q 048639 336 GAVSQEPSLFTGSLMDNIKVGNMDADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVKNPP 415 (1139)
Q Consensus 336 ~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~~~~ 415 (1139)
+.+||||.||+||+|.|+.... +.+|+++|+|++.+++++.++++|+|+|+.+.|+|.|+|-||||.+||||||+++++
T Consensus 1217 sIIPQdPvLFsGTvR~NLDPf~-e~sD~~IW~ALe~~~Lk~~v~~~p~~Ld~~v~egG~N~SvGQRQLlCLARALLr~sk 1295 (1381)
T KOG0054|consen 1217 SIIPQDPVLFSGTVRFNLDPFD-EYSDDEIWEALERCQLKDVVSSLPGGLDSEVSEGGENFSVGQRQLLCLARALLRKSK 1295 (1381)
T ss_pred eeeCCCCceecCccccccCccc-ccCHHHHHHHHHHhChHHHHhhCCcCCCceecCCCccCChHHHHHHHHHHHHhccCC
Confidence 9999999999999999998543 678999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhccCEEEEEeCcEEEEecChhhhhcc-chHHHHHH
Q 048639 416 ILLLDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVNADMIAVVEDGQVTETGTHHSLLQT-SDFYNRLF 491 (1139)
Q Consensus 416 illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~-~~~~~~~~ 491 (1139)
||+|||+||++|++|...|++.|++..++||||.|+||++++.+||||+|||+|+|+|.|+|.+|+++ ++.|+.+.
T Consensus 1296 ILvLDEATAsVD~~TD~lIQ~tIR~~F~dcTVltIAHRl~TVmd~DrVlVld~G~v~EfdsP~~Ll~~~~S~f~~~l 1372 (1381)
T KOG0054|consen 1296 ILVLDEATASVDPETDALIQKTIREEFKDCTVLTIAHRLNTVMDSDRVLVLDAGRVVEFDSPAELLSDKDSLFSSLL 1372 (1381)
T ss_pred EEEEecccccCChHHHHHHHHHHHHHhcCCeEEEEeeccchhhhcCeEEEeeCCeEeecCChHHHHhCCcchHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999976 55665443
No 89
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=100.00 E-value=4.1e-65 Score=622.11 Aligned_cols=474 Identities=19% Similarity=0.203 Sum_probs=371.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccCCCChhHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 617 SLFTHTLQHYFFGVVGEKAMTNLRRTLYTGVLRNEIAWFEKPQNDAGSLTSRIVSDTSMVKAIISDRMSVIVQCISSILI 696 (1139)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~~~~ff~~~~~~~G~i~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~ 696 (1139)
..++.++..++....+.+...++|.++++++++.|++||+ ++++|++++|+++|++.+...+. .+..++..++.+++
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~lR~~l~~~ll~~~~~~~~--~~~~g~~lsrl~~dv~~i~~~~~-~l~~~~~~~~~~i~ 137 (547)
T PRK10522 61 LMAVTLGSQLALTTLGHHFVYRLRSEFIKRILDTHVERIE--QLGSASLLASLTSDVRNITIAFV-RLPELVQGIILTLG 137 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHh--ccCccchHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 3456677888888999999999999999999999999999 68899999999999999998765 46777888888888
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHHHHHHhhcchHHHHhhcch---HHHHHHHHH
Q 048639 697 ATIVSLVVDWRMALVAWAVMPCHFIGGLIQAKSAQGFSGDSAAAHTEFISLTSESASNIRTVASFCHE---ENILQKAKI 773 (1139)
Q Consensus 697 ~~~~~~~~~~~l~lv~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~---~~~~~~~~~ 773 (1139)
++++++.++|.+++++++.+|+.+++.++..+..++..++.++...+..+.+.|.++|+++++ ++.+ +.+.+++.+
T Consensus 138 ~~~~l~~~~~~l~li~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~-~~~~~~~~~~~~~~~~ 216 (547)
T PRK10522 138 SAAYLAWLSPKMLLVTAIWMAVTIWGGFVLVARVYKHMATLRETEDKLYNDYQTVLEGRKELT-LNRERAEYVFENEYEP 216 (547)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhh-ccHHHHHHHHHHHHhH
Confidence 889999999999999999999888777777776666667777788889999999999999995 4443 356677777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 774 SLEKTKRSSRKESIKYGVIQGFSLCLWNIAHAVALWYTAVLIDKKQATFRDGIRAYQIFSLTVPSITELWTLIPTVISAI 853 (1139)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 853 (1139)
..++..+...+..........+......+...+.++++... +..+.+.......+......++..+...+..+..+.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~ 293 (547)
T PRK10522 217 DAQEYRHHIIRADTFHLSAVNWSNIMMLGAIGLVFYMANSL---GWADTNVAATYSLTLLFLRTPLLSAVGALPTLLSAQ 293 (547)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---hcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666554444333222222222112212222222222221 112222322222333334578888999999999999
Q ss_pred HHHHHHHHHhccCCCCCCCCCCCCCCCCccccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHH
Q 048639 854 TVLAPAFEILDRKTEIEPDAPESSESGRIKGRIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLAL 933 (1139)
Q Consensus 854 ~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~l 933 (1139)
.+.+|+.++.+.+++.+... ..+ .+..+.|+|+||+|+|+++ .++|+|+||+|+|||++|||||||||||||+++
T Consensus 294 ~a~~ri~~l~~~~~~~~~~~--~~~-~~~~~~i~~~~v~f~y~~~--~~~l~~i~~~i~~G~~~aivG~sGsGKSTL~~l 368 (547)
T PRK10522 294 VAFNKLNKLALAPYKAEFPR--PQA-FPDWQTLELRNVTFAYQDN--GFSVGPINLTIKRGELLFLIGGNGSGKSTLAML 368 (547)
T ss_pred HHHHHHHHHhcccccccccc--ccc-cCcCceEEEEEEEEEeCCC--CeEEecceEEEcCCCEEEEECCCCCCHHHHHHH
Confidence 99999999875433221111 111 1113579999999999742 469999999999999999999999999999999
Q ss_pred HhccccCCccEEEECCcccCCCChHHHhhhceEEccccccccccHHHHhccCCCcCCHHHHHHHHHHcCchHHHhhCCCC
Q 048639 934 LLRFYDPNEGIILIDGKGIKEYNLRRLRSQIGLVQQEPLLFSCSIRNNICYGNEAASEAEIVEVSKKANIHDFISSLPDG 1013 (1139)
Q Consensus 934 L~rl~~p~~G~I~idG~di~~~~l~~lR~~i~~V~Qdp~LF~gTIreNL~~~~~~~sd~ei~~al~~~~l~~~i~~lp~g 1013 (1139)
|+|+|+|++|+|.+||+|+++++.+.+|++++||||||++|++|+++| + +..++++++++++++++.+++.. |+|
T Consensus 369 l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~n---~-~~~~~~~~~~~~~~~~l~~~~~~-~~~ 443 (547)
T PRK10522 369 LTGLYQPQSGEILLDGKPVTAEQPEDYRKLFSAVFTDFHLFDQLLGPE---G-KPANPALVEKWLERLKMAHKLEL-EDG 443 (547)
T ss_pred HhCCCCCCCeEEEECCEECCCCCHHHHhhheEEEecChhHHHHhhccc---c-CchHHHHHHHHHHHcCCchhhhc-ccc
Confidence 999999999999999999999999999999999999999999999999 2 45788899999999998877653 444
Q ss_pred ccccccCCCCCCChHHHHHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCc
Q 048639 1014 YDTVVGEKGCQLSGGQKQRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRL 1093 (1139)
Q Consensus 1014 ldt~v~e~G~~LSgGQrQrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl 1093 (1139)
. .+|.+||||||||++||||++++|+|||||||||+||+++++.+.+.+.+... ..++|+|+||||+
T Consensus 444 ~-----~~G~~LSgGq~qRl~lARal~~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~--------~~~~tvi~itH~~ 510 (547)
T PRK10522 444 R-----ISNLKLSKGQKKRLALLLALAEERDILLLDEWAADQDPHFRREFYQVLLPLLQ--------EMGKTIFAISHDD 510 (547)
T ss_pred C-----CCCCCCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHH--------hCCCEEEEEEech
Confidence 2 14789999999999999999999999999999999999999999999875430 1234599999999
Q ss_pred hhhhcCCEEEEEeCCEEEEe-cChhHHh
Q 048639 1094 ATVINSDVIVVMDKGEVVEM-GSHSTLV 1120 (1139)
Q Consensus 1094 ~ti~~~DrI~vl~~G~ive~-G~~~eLl 1120 (1139)
+++..||+|++|++|+++|. |++.+-.
T Consensus 511 ~~~~~~d~i~~l~~G~i~e~~~~~~~~~ 538 (547)
T PRK10522 511 HYFIHADRLLEMRNGQLSELTGEERDAA 538 (547)
T ss_pred HHHHhCCEEEEEECCEEEEecCCchhhh
Confidence 99999999999999999987 5555544
No 90
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=100.00 E-value=9.3e-66 Score=627.54 Aligned_cols=456 Identities=18% Similarity=0.179 Sum_probs=383.2
Q ss_pred HHHHHHHHHHHHHHH---------HcCCcccccccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 048639 6 LILSWHPKGNRVLMK---------IGGEVGAFDTDLSTGKVITGVSSHMSVIRDAIGEKLGHFLSSFATFFSGVLIAVIC 76 (1139)
Q Consensus 6 ~~~~~~~~~~~~~~~---------l~~~~~~f~~~~~~G~l~~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 76 (1139)
..+++...++++..+ +++|++||++. ++|++++|+++|++.+++++.. +..++..++++++.+++++++
T Consensus 73 ~~~~~~~~~~~~~~~lR~~l~~~l~~~~~~~~~~~-~~G~l~srl~~Dv~~i~~~~~~-~~~~~~~~~~~~~~~~~l~~~ 150 (555)
T TIGR01194 73 ADIFPAYAGMHIIANLRIALCEKILGAPIEEIDRR-GAHNLIPLLTHDIDQINAFLFI-FPPIAIALAIFFFCIAYLAYL 150 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHhc-CcchhhHHHhhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 344455555555554 88999999987 8999999999999999998864 777788888888889999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccH--HHHHHHHHHHHHHHHHH
Q 048639 77 CWEVSLLIFLVVPMILVIGATYTKRMNAVSATKLLYLSEATSMIEQTISQIKTVFAFVGER--SEIKSFSDCMDKQIIIS 154 (1139)
Q Consensus 77 ~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~--~~~~~~~~~~~~~~~~~ 154 (1139)
+|.+++++++.+|+.+++..++.++.++...+.++..++.++.+.|.+.|++++|+|+.++ .+.+++.+..++..+..
T Consensus 151 ~~~L~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (555)
T TIGR01194 151 SVPMFAITISAIIIGTAAQLLAFMGGFKFFHAARDEEDAFNEHTHAIAFGAKELKIHGIRRLSFAHGAIQESANNIADLH 230 (555)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhHHHHHhcCHHHHHHHHHHHhhHHHHHHHHHH
Confidence 9999999888888888888888888888888889999999999999999999999999954 55778888888777776
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 155 RGEALIKGVGLGMFQSVTFCCWALIIWVGAVVVTAKRSTGGEVLAAVMSILFGAIALTYAAPDMQVFNQAKAAGFEIFQV 234 (1139)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~l~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ri~~~ 234 (1139)
.+..........+..++..+...+.+++|++. +.+++|.+++++.+......|+..+...+..++++.++++|+.++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~t~g~l~a~~~~~~~l~~pi~~l~~~~~~~~~a~~s~~ri~~l 307 (555)
T TIGR01194 231 IIEILIFIAAENFGQLLFFLLIGCALFAAAMF---ASIDAAAISAFVLALLYIKGPLEMLVSALPILAQAQIACQRLADF 307 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66555544444444444434344444555443 789999999999999999999999999999999999999999999
Q ss_pred hccCCC--Cc-c-CCCCc----cccCCCccEEEEeEEEECCCCC--CCccccceeEEecCCCEEEEECCCCCcHHHHHHH
Q 048639 235 IQRKPR--IS-Y-SSKGK----ELEKIDGNIDIRDVCFAYPSRP--DQLILKGFSLSIPAGKMVALVGSSGCGKSTVISL 304 (1139)
Q Consensus 235 l~~~~~--~~-~-~~~~~----~~~~~~~~i~~~~v~~~y~~~~--~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~ 304 (1139)
++.+++ .. . ..... .+....+.|+++||+|+|++.+ .+++|+|+||++++||+++|+||||||||||+++
T Consensus 308 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~~~l~~vs~~i~~G~~~aivG~sGsGKSTl~~l 387 (555)
T TIGR01194 308 GERFNEPEPELELSDADNVLLLAHDKSVDSIELKDVHMNPKAPEGSEGFALGPIDLRIAQGDIVFIVGENGCGKSTLAKL 387 (555)
T ss_pred HhhhccccccccccccccccccccCCCCceEEEEEEEEEeCCCCCCcCceeccceEEEcCCcEEEEECCCCCCHHHHHHH
Confidence 853211 10 0 00000 1112235799999999997532 2369999999999999999999999999999999
Q ss_pred HHhccCCCccEEEECCccCCCCCHHHHhcceEEEecCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCC
Q 048639 305 VARFYDPSNGDILIDSLNIKDLDLKSLRKNIGAVSQEPSLFTGSLMDNIKVGNMDADDEQIYNASMMANAHSFISQLPDQ 384 (1139)
Q Consensus 305 l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g 384 (1139)
|+|+++|++|+|.+||.++++++.+++|++++||+|+|++|++|+++|+ .++.+++++.++++.+++++++..+|+|
T Consensus 388 l~g~~~p~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~ti~~n~---~~~~~~~~~~~~~~~~~l~~~~~~lp~g 464 (555)
T TIGR01194 388 FCGLYIPQEGEILLDGAAVSADSRDDYRDLFSAIFADFHLFDDLIGPDE---GEHASLDNAQQYLQRLEIADKVKIEDGG 464 (555)
T ss_pred HhCCCCCCCcEEEECCEECCCCCHHHHHhhCcEEccChhhhhhhhhccc---ccchhHHHHHHHHHHcCCchhhcccccc
Confidence 9999999999999999999999999999999999999999999999995 4567889999999999999999999999
Q ss_pred CCccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHH-HH-cCCCeEEEEecCccchhccCE
Q 048639 385 YSTELGQRGVQLSGGQKQRIAIARAIVKNPPILLLDEATSALDSESEKLVQEALE-RA-MQGRTVILIAHRMSTIVNADM 462 (1139)
Q Consensus 385 ~~t~i~~~g~~LSgGqkqRi~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~-~~-~~~~tvi~itH~~~~~~~~d~ 462 (1139)
++|. .+||||||||++||||++++|+|+|||||||+||+++++.+.+.+. .. .+++|+|+||||++.+..||+
T Consensus 465 ~~t~-----~~LSgGq~qRlalaRall~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tiiiisH~~~~~~~~d~ 539 (555)
T TIGR01194 465 FSTT-----TALSTGQQKRLALICAWLEDRPILLFDEWAADQDPAFKRFFYEELLPDLKRQGKTIIIISHDDQYFELADQ 539 (555)
T ss_pred cCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHhCCE
Confidence 9984 7899999999999999999999999999999999999999988764 33 468999999999999989999
Q ss_pred EEEEeCcEEEEe
Q 048639 463 IAVVEDGQVTET 474 (1139)
Q Consensus 463 i~~l~~G~i~~~ 474 (1139)
|++|++|++++.
T Consensus 540 i~~l~~G~i~~~ 551 (555)
T TIGR01194 540 IIKLAAGCIVKD 551 (555)
T ss_pred EEEEECCEEEEe
Confidence 999999999864
No 91
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.4e-66 Score=632.75 Aligned_cols=480 Identities=22% Similarity=0.317 Sum_probs=333.4
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcceE
Q 048639 257 IDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNIG 336 (1139)
Q Consensus 257 i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 336 (1139)
|+++|++++|++ +++|+|+||+|++|+++||+||||||||||+++|+|+++|++|+|.++|.. .++
T Consensus 2 i~i~nls~~~g~---~~~l~~vs~~i~~Ge~v~LvG~NGsGKSTLLkiL~G~~~pd~G~I~~~~~~-----------~i~ 67 (638)
T PRK10636 2 IVFSSLQIRRGV---RVLLDNATATINPGQKVGLVGKNGCGKSTLLALLKNEISADGGSYTFPGNW-----------QLA 67 (638)
T ss_pred EEEEEEEEEeCC---ceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCCC-----------EEE
Confidence 789999999963 459999999999999999999999999999999999999999999998842 489
Q ss_pred EEecCCCCCcccHHHHHhcCCCCC--------------CHHHH---HHH-------HHHhcHHHHHHhCCCCCC-ccccc
Q 048639 337 AVSQEPSLFTGSLMDNIKVGNMDA--------------DDEQI---YNA-------SMMANAHSFISQLPDQYS-TELGQ 391 (1139)
Q Consensus 337 ~v~Q~~~l~~~ti~~ni~~g~~~~--------------~~~~~---~~~-------~~~~~~~~~i~~l~~g~~-t~i~~ 391 (1139)
|++|++..+..|+.+.+.-+.... ....+ ... .....+.+.+..+ |+. .....
T Consensus 68 ~~~q~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l--gl~~~~~~~ 145 (638)
T PRK10636 68 WVNQETPALPQPALEYVIDGDREYRQLEAQLHDANERNDGHAIATIHGKLDAIDAWTIRSRAASLLHGL--GFSNEQLER 145 (638)
T ss_pred EEecCCCCCCCCHHHHHHHhhHHHHHHHHHHHHHhccCCHHHHHHHHHHHHhcCCcchHHHHHHHHHhC--CCCchhhcC
Confidence 999976545556666554211000 00000 000 0011233455555 443 24566
Q ss_pred cCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhc-cCEEEEEeCcE
Q 048639 392 RGVQLSGGQKQRIAIARAIVKNPPILLLDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVN-ADMIAVVEDGQ 470 (1139)
Q Consensus 392 ~g~~LSgGqkqRi~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~~G~ 470 (1139)
...+||||||||++|||||+.+|++|||||||++||+.+..++.+.|++. +.|+|+|||+++++.. ||+|++|++|+
T Consensus 146 ~~~~LSgGerqRv~LA~aL~~~P~lLLLDEPtn~LD~~~~~~L~~~L~~~--~~tviivsHd~~~l~~~~d~i~~L~~G~ 223 (638)
T PRK10636 146 PVSDFSGGWRMRLNLAQALICRSDLLLLDEPTNHLDLDAVIWLEKWLKSY--QGTLILISHDRDFLDPIVDKIIHIEQQS 223 (638)
T ss_pred chhhcCHHHHHHHHHHHHHccCCCEEEEcCCCCcCCHHHHHHHHHHHHhC--CCeEEEEeCCHHHHHHhcCEEEEEeCCE
Confidence 77899999999999999999999999999999999999999999999775 5799999999999976 99999999999
Q ss_pred EE-EecChhhhhccchHHHHHHhhccCCCCCCcCcccccccccccchhhhhhhcccCchhhhhhcccccchhhhcccccc
Q 048639 471 VT-ETGTHHSLLQTSDFYNRLFTMQNLRPIDDSRTKASTVESTSTEQQISVVEQLEEPEESKRELSASTGQEEVKGKRTT 549 (1139)
Q Consensus 471 i~-~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 549 (1139)
+. ..|+++......... .. . + .
T Consensus 224 i~~~~g~~~~~~~~~~~~---~~---------------------------~-------------------~--~------ 246 (638)
T PRK10636 224 LFEYTGNYSSFEVQRATR---LA---------------------------Q-------------------Q--Q------ 246 (638)
T ss_pred EEEecCCHHHHHHHHHHH---HH---------------------------H-------------------H--H------
Confidence 96 467666543210000 00 0 0 0
Q ss_pred hhhHHHHhhchhhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 550 IFFRIWFCLNERELLRLVVGTVAAAFSGISKPLFGFFIITIGVAYYDPQAKQEVGWYSLAFSLVGLFSLFTHTLQHYFFG 629 (1139)
Q Consensus 550 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 629 (1139)
..+.+
T Consensus 247 ------~~~~~--------------------------------------------------------------------- 251 (638)
T PRK10636 247 ------AMYES--------------------------------------------------------------------- 251 (638)
T ss_pred ------HHHHH---------------------------------------------------------------------
Confidence 00000
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCcccccCCCChhHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q 048639 630 VVGEKAMTNLRRTLYTGVLRNEIAWFEKPQNDAGSLTSRIVSDTSMVKAIISDRMSVIVQCISSILIATIVSLVVDWRMA 709 (1139)
Q Consensus 630 ~~~~~~~~~l~~~l~~~ll~~~~~ff~~~~~~~G~i~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~ 709 (1139)
....+ .+
T Consensus 252 -----~~~~~-----~~--------------------------------------------------------------- 258 (638)
T PRK10636 252 -----QQERV-----AH--------------------------------------------------------------- 258 (638)
T ss_pred -----HHHHH-----HH---------------------------------------------------------------
Confidence 00000 00
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHHHHHHhhcchHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 710 LVAWAVMPCHFIGGLIQAKSAQGFSGDSAAAHTEFISLTSESASNIRTVASFCHEENILQKAKISLEKTKRSSRKESIKY 789 (1139)
Q Consensus 710 lv~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (1139)
+..+.+++...-....+.
T Consensus 259 ------------------------------------------------------~~~~i~r~~~~a~~~~~a-------- 276 (638)
T PRK10636 259 ------------------------------------------------------LQSYIDRFRAKATKAKQA-------- 276 (638)
T ss_pred ------------------------------------------------------HHHHHHHhhhhhhhHHHH--------
Confidence 000000000000000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 048639 790 GVIQGFSLCLWNIAHAVALWYTAVLIDKKQATFRDGIRAYQIFSLTVPSITELWTLIPTVISAITVLAPAFEILDRKTEI 869 (1139)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~ 869 (1139)
.......+++.. .. ++..
T Consensus 277 ------------------------------------------------------------~~r~~~l~~~~~-~~-~~~~ 294 (638)
T PRK10636 277 ------------------------------------------------------------QSRIKMLERMEL-IA-PAHV 294 (638)
T ss_pred ------------------------------------------------------------HHHHHHHHHhhc-cc-cccc
Confidence 000000011000 00 0000
Q ss_pred CCCCCCC-CCCC-CccccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEE
Q 048639 870 EPDAPES-SESG-RIKGRIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILI 947 (1139)
Q Consensus 870 ~~~~~~~-~~~~-~~~g~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~i 947 (1139)
.....-. +.+. ..+..|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+
T Consensus 295 ~~~~~~~~~~~~~~~~~~l~~~~l~~~y~~---~~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~ 371 (638)
T PRK10636 295 DNPFHFSFRAPESLPNPLLKMEKVSAGYGD---RIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELAPVSGEIGL 371 (638)
T ss_pred CCceeEecCCCccCCCceEEEEeeEEEeCC---eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEE
Confidence 0000000 0000 01225999999999953 46999999999999999999999999999999999999999999999
Q ss_pred CCcccCCCChHHHhhhceEEcccc--ccc-cccHHHHhccCCCcCCHHHHHHHHHHcCchH-HHhhCCCCccccccCCCC
Q 048639 948 DGKGIKEYNLRRLRSQIGLVQQEP--LLF-SCSIRNNICYGNEAASEAEIVEVSKKANIHD-FISSLPDGYDTVVGEKGC 1023 (1139)
Q Consensus 948 dG~di~~~~l~~lR~~i~~V~Qdp--~LF-~gTIreNL~~~~~~~sd~ei~~al~~~~l~~-~i~~lp~gldt~v~e~G~ 1023 (1139)
++. .+++|+||++ .++ ..|+.+++....+...++++.+.++..++.+ .. +.++ .
T Consensus 372 ~~~-----------~~igy~~Q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~l~~~~~-------~~~~----~ 429 (638)
T PRK10636 372 AKG-----------IKLGYFAQHQLEFLRADESPLQHLARLAPQELEQKLRDYLGGFGFQGDKV-------TEET----R 429 (638)
T ss_pred CCC-----------EEEEEecCcchhhCCccchHHHHHHHhCchhhHHHHHHHHHHcCCChhHh-------cCch----h
Confidence 741 2699999985 343 3478888742223334567788888887742 22 2233 4
Q ss_pred CCChHHHHHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEE
Q 048639 1024 QLSGGQKQRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVI 1102 (1139)
Q Consensus 1024 ~LSgGQrQrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI 1102 (1139)
.||||||||++|||||+.+|++|||||||++||+.+...+.+.|+++ ++ |||+|||+++.+.. ||+|
T Consensus 430 ~LSgGekqRl~La~~l~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~-----------~g-tvi~vSHd~~~~~~~~d~i 497 (638)
T PRK10636 430 RFSGGEKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALIDF-----------EG-ALVVVSHDRHLLRSTTDDL 497 (638)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc-----------CC-eEEEEeCCHHHHHHhCCEE
Confidence 69999999999999999999999999999999999999999999864 23 59999999999976 9999
Q ss_pred EEEeCCEEE-EecChhHHh
Q 048639 1103 VVMDKGEVV-EMGSHSTLV 1120 (1139)
Q Consensus 1103 ~vl~~G~iv-e~G~~~eLl 1120 (1139)
++|++|+++ ..|++++..
T Consensus 498 ~~l~~G~i~~~~g~~~~~~ 516 (638)
T PRK10636 498 YLVHDGKVEPFDGDLEDYQ 516 (638)
T ss_pred EEEECCEEEEcCCCHHHHH
Confidence 999999998 678998874
No 92
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=8.5e-65 Score=663.01 Aligned_cols=214 Identities=25% Similarity=0.415 Sum_probs=177.8
Q ss_pred cEEEEeEEEECCCC----------CCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccC--CccEEEECCccc
Q 048639 885 RIEFQNIKFNYPSR----------PEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDP--NEGIILIDGKGI 952 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~----------~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p--~~G~I~idG~di 952 (1139)
.+.|+||++.++.. ....+|+|||++|+|||.+||+||||||||||+++|.|..++ .+|+|.+||.+.
T Consensus 867 ~~~~~~v~y~v~~~~~~~~~~~~~~~~~iL~~vs~~i~~Gel~aL~G~sGaGKTTLL~~LaG~~~~g~~~G~I~inG~~~ 946 (1470)
T PLN03140 867 AMSFDDVNYFVDMPAEMKEQGVTEDRLQLLREVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 946 (1470)
T ss_pred eEEEEEEEEEEccCccccccccCcCCceEeeCcEEEEECCeEEEEECCCCCCHHHHHHHHcCCCCCCcccceEEECCccC
Confidence 69999999998532 123699999999999999999999999999999999999763 689999999886
Q ss_pred CCCChHHHhhhceEEcccccccc-ccHHHHhccCC----C-cCCHH----HHHHHHHHcCchHHHhhCCCCccccccCCC
Q 048639 953 KEYNLRRLRSQIGLVQQEPLLFS-CSIRNNICYGN----E-AASEA----EIVEVSKKANIHDFISSLPDGYDTVVGEKG 1022 (1139)
Q Consensus 953 ~~~~l~~lR~~i~~V~Qdp~LF~-gTIreNL~~~~----~-~~sd~----ei~~al~~~~l~~~i~~lp~gldt~v~e~G 1022 (1139)
+. ..+|+.+|||+|++.++. .|++|||.+.. | ..+++ .+.++++..+|.+. .|+.+|..+
T Consensus 947 ~~---~~~~~~igyv~Q~d~~~~~lTV~E~L~~~a~lr~~~~~~~~~~~~~v~~vl~~lgL~~~-------~~~~vg~~~ 1016 (1470)
T PLN03140 947 KQ---ETFARISGYCEQNDIHSPQVTVRESLIYSAFLRLPKEVSKEEKMMFVDEVMELVELDNL-------KDAIVGLPG 1016 (1470)
T ss_pred Ch---HHhhhheEEEccccccCCCCcHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHCCChhH-------hCCccCCCC
Confidence 53 457788999999987775 69999997631 1 22322 36778888888654 356666443
Q ss_pred -CCCChHHHHHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchh-h-hcC
Q 048639 1023 -CQLSGGQKQRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLAT-V-INS 1099 (1139)
Q Consensus 1023 -~~LSgGQrQrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~t-i-~~~ 1099 (1139)
..||||||||++|||||+.+|+||+||||||+||+.+...|.+.|++.. ..++|||+++|+++. + ..|
T Consensus 1017 ~~~LSgGerkRvsIa~aL~~~P~lL~LDEPTsgLD~~~a~~v~~~L~~l~---------~~g~tVI~t~Hq~~~~i~~~~ 1087 (1470)
T PLN03140 1017 VTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTV---------DTGRTVVCTIHQPSIDIFEAF 1087 (1470)
T ss_pred CCCcCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHH---------HCCCEEEEEeCCCCHHHHHhC
Confidence 5799999999999999999999999999999999999999999999875 334569999999984 4 459
Q ss_pred CEEEEEeC-CEEEEecChh
Q 048639 1100 DVIVVMDK-GEVVEMGSHS 1117 (1139)
Q Consensus 1100 DrI~vl~~-G~ive~G~~~ 1117 (1139)
|++++|++ |+++.+|++.
T Consensus 1088 D~vllL~~gG~~v~~G~~~ 1106 (1470)
T PLN03140 1088 DELLLMKRGGQVIYSGPLG 1106 (1470)
T ss_pred CEEEEEcCCCEEEEECCcc
Confidence 99999996 8999999864
No 93
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=7.8e-66 Score=568.15 Aligned_cols=443 Identities=24% Similarity=0.368 Sum_probs=394.3
Q ss_pred chhHHHHHHhhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 34 TGKVITGVSSHMSVIRDAIGEK-LGHFLSSFATFFSGVLIAVICCWEVSLLIFLVVPMILVIGATYTKRMNAVSATKLLY 112 (1139)
Q Consensus 34 ~G~l~~~~~~D~~~i~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (1139)
.|+=..-+ +|.++++.|++.. +..++...|+.+. +.++|.+.+++.++.++...+++.+.++-.+..++-.++..+.
T Consensus 116 ~g~~~Q~L-rDL~qvR~Fltg~g~~A~fDaPW~P~y-l~v~fl~Hp~lG~~a~~ga~iLv~la~ln~~~t~~p~~eA~~~ 193 (580)
T COG4618 116 SGDGLQPL-RDLDQVRQFLTGTGLTAFFDAPWMPLY-LAVIFLFHPWLGLIALAGAIILVVLALLNERATRKPLKEASEA 193 (580)
T ss_pred CCccccch-hhHHHHHHHHcCCCcchhcCCchHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHH
Confidence 44433333 6999999999874 5556666776664 5667777887888777777777666666666777777788888
Q ss_pred HHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 048639 113 LSEATSMIEQTISQIKTVFAFVGERSEIKSFSDCMDKQIIISRGEALIKGVGLGMFQSVTFCCWALIIWVGAVVVTAKRS 192 (1139)
Q Consensus 113 ~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~l 192 (1139)
..+.+....-+.++.++|++.|+.+...++|.+.+..+.....+.+-..+....+.-.+-.+....++.+|+|++++|++
T Consensus 194 ~~~~~~~~~a~~RNAEvi~AMGM~~~l~~rW~~~~~~~L~~~~~asd~~~~~~~~Sr~~Rm~lQs~iLg~GA~Lvi~ge~ 273 (580)
T COG4618 194 SIRANQLADATLRNAEVIEAMGMLGNLAKRWGRFNAAYLSAQERASDRNGAFGALSRALRMALQSAVLGLGAWLVIKGEI 273 (580)
T ss_pred HHHHHHHHHHHhhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcceeeEEcCcC
Confidence 89999999999999999999999999999999999999988888877777777777777777888889999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccCCCCccccCCCccEEEEeEEEECCCCCCC
Q 048639 193 TGGEVLAAVMSILFGAIALTYAAPDMQVFNQAKAAGFEIFQVIQRKPRISYSSKGKELEKIDGNIDIRDVCFAYPSRPDQ 272 (1139)
Q Consensus 193 ~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~ 272 (1139)
|+|.+++....+.....|+......+..|..++.|++|+.+++...|... ..-+.++.++.+.++++++.-|+. ++
T Consensus 274 t~G~mIA~SIl~gRaLaPid~aI~~Wkq~~~Ar~s~~Rl~~lL~~~p~~~---~~m~LP~P~g~L~Ve~l~~~PPg~-~~ 349 (580)
T COG4618 274 TPGMMIAGSILSGRALAPIDLAIANWKQFVAARQSYKRLNELLAELPAAA---ERMPLPAPQGALSVERLTAAPPGQ-KK 349 (580)
T ss_pred CcchhhHHHHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccc---CCCCCCCCCceeeEeeeeecCCCC-CC
Confidence 99999998878888888999999999999999999999999998765432 112344556889999999987654 57
Q ss_pred ccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcceEEEecCCCCCcccHHHH
Q 048639 273 LILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNIGAVSQEPSLFTGSLMDN 352 (1139)
Q Consensus 273 ~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~n 352 (1139)
++|+|+||++++||.++||||||||||||.++|.|.++|.+|.|++||-|+++++.+.+-++|||.||+..||+|||.||
T Consensus 350 pil~~isF~l~~G~~lgIIGPSgSGKSTLaR~lvG~w~p~~G~VRLDga~l~qWd~e~lG~hiGYLPQdVeLF~GTIaeN 429 (580)
T COG4618 350 PILKGISFALQAGEALGIIGPSGSGKSTLARLLVGIWPPTSGSVRLDGADLRQWDREQLGRHIGYLPQDVELFDGTIAEN 429 (580)
T ss_pred cceecceeEecCCceEEEECCCCccHHHHHHHHHcccccCCCcEEecchhhhcCCHHHhccccCcCcccceecCCcHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHH
Q 048639 353 IKVGNMDADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVKNPPILLLDEATSALDSESEK 432 (1139)
Q Consensus 353 i~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~~~~illlDEpts~LD~~~~~ 432 (1139)
|.-..++.+++.+.+|++.++.||.|.++|+||||.||+.|..|||||||||+||||||.||.+++||||-|+||.+.|.
T Consensus 430 IaRf~~~~d~~kIieAA~lAgvHelIl~lP~GYdT~iG~~G~~LSgGQRQRIaLARAlYG~P~lvVLDEPNsNLD~~GE~ 509 (580)
T COG4618 430 IARFGEEADPEKVIEAARLAGVHELILRLPQGYDTRIGEGGATLSGGQRQRIALARALYGDPFLVVLDEPNSNLDSEGEA 509 (580)
T ss_pred HHhccccCCHHHHHHHHHHcChHHHHHhCcCCccCccCCCCCCCCchHHHHHHHHHHHcCCCcEEEecCCCCCcchhHHH
Confidence 98777788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHc-CCCeEEEEecCccchhccCEEEEEeCcEEEEecChhhhhc
Q 048639 433 LVQEALERAM-QGRTVILIAHRMSTIVNADMIAVVEDGQVTETGTHHSLLQ 482 (1139)
Q Consensus 433 ~i~~~l~~~~-~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~ 482 (1139)
.+.++|...+ +|.|+|+||||++.+..+|+|++|++|++...|+.+|+++
T Consensus 510 AL~~Ai~~~k~rG~~vvviaHRPs~L~~~Dkilvl~~G~~~~FG~r~eVLa 560 (580)
T COG4618 510 ALAAAILAAKARGGTVVVIAHRPSALASVDKILVLQDGRIAAFGPREEVLA 560 (580)
T ss_pred HHHHHHHHHHHcCCEEEEEecCHHHHhhcceeeeecCChHHhcCCHHHHHH
Confidence 9999998865 5899999999999999999999999999999999999875
No 94
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=4e-64 Score=620.48 Aligned_cols=201 Identities=25% Similarity=0.420 Sum_probs=166.5
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhc
Q 048639 885 RIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQI 964 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i 964 (1139)
-|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+ |.++ +|
T Consensus 319 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~-~~~~----------~i 384 (635)
T PRK11147 319 VFEMENVNYQIDG---KQLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQADSGRIHC-GTKL----------EV 384 (635)
T ss_pred eEEEeeeEEEECC---eEEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEE-CCCc----------EE
Confidence 4899999999963 35999999999999999999999999999999999999999999999 5432 59
Q ss_pred eEEcccc-cccc-ccHHHHhccCCCcC--C--HHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 048639 965 GLVQQEP-LLFS-CSIRNNICYGNEAA--S--EAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIART 1038 (1139)
Q Consensus 965 ~~V~Qdp-~LF~-gTIreNL~~~~~~~--s--d~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalARA 1038 (1139)
+|++|++ .++. .|+.+|+.++.+.. . +.++.+.++..++.+. ..+.++ ..||||||||++||||
T Consensus 385 ~y~~q~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~~~l~~~------~~~~~~----~~LSgGekqRl~la~a 454 (635)
T PRK11147 385 AYFDQHRAELDPEKTVMDNLAEGKQEVMVNGRPRHVLGYLQDFLFHPK------RAMTPV----KALSGGERNRLLLARL 454 (635)
T ss_pred EEEeCcccccCCCCCHHHHHHhhcccccccchHHHHHHHHHhcCCCHH------HHhChh----hhCCHHHHHHHHHHHH
Confidence 9999986 4554 49999998653211 1 3456666776665321 123333 4699999999999999
Q ss_pred hcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEe-CCEEEEe-cC
Q 048639 1039 LLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMD-KGEVVEM-GS 1115 (1139)
Q Consensus 1039 Llr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~-~G~ive~-G~ 1115 (1139)
|+.+|++|||||||++||..+...+.+.|++. ++ |||+|||+++.+.. ||+|++|+ +|+++++ |+
T Consensus 455 l~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~-----------~~-tvi~vSHd~~~~~~~~d~i~~l~~~g~i~~~~g~ 522 (635)
T PRK11147 455 FLKPSNLLILDEPTNDLDVETLELLEELLDSY-----------QG-TVLLVSHDRQFVDNTVTECWIFEGNGKIGRYVGG 522 (635)
T ss_pred HhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC-----------CC-eEEEEECCHHHHHHhcCEEEEEeCCCeEEEccCC
Confidence 99999999999999999999999999999853 23 59999999999876 99999998 8999875 78
Q ss_pred hhHHhh
Q 048639 1116 HSTLVA 1121 (1139)
Q Consensus 1116 ~~eLl~ 1121 (1139)
+++.+.
T Consensus 523 y~~y~~ 528 (635)
T PRK11147 523 YHDARQ 528 (635)
T ss_pred HHHHHH
Confidence 877754
No 95
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=2.6e-64 Score=619.76 Aligned_cols=199 Identities=24% Similarity=0.413 Sum_probs=165.5
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhc
Q 048639 885 RIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQI 964 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i 964 (1139)
.|+++||+++|+++ .++|+|+||+|++||++||+||||||||||+++|.|+.+|++|+|.+++ +.++
T Consensus 508 ~L~~~~ls~~y~~~--~~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~p~~G~I~~~~-----------~~~i 574 (718)
T PLN03073 508 IISFSDASFGYPGG--PLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQPSSGTVFRSA-----------KVRM 574 (718)
T ss_pred eEEEEeeEEEeCCC--CeeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCceEEECC-----------ceeE
Confidence 59999999999632 3589999999999999999999999999999999999999999999875 2469
Q ss_pred eEEccccccccccHHHHhcc----CCCcCCHHHHHHHHHHcCchH-HHhhCCCCccccccCCCCCCChHHHHHHHHHHHh
Q 048639 965 GLVQQEPLLFSCSIRNNICY----GNEAASEAEIVEVSKKANIHD-FISSLPDGYDTVVGEKGCQLSGGQKQRIAIARTL 1039 (1139)
Q Consensus 965 ~~V~Qdp~LF~gTIreNL~~----~~~~~sd~ei~~al~~~~l~~-~i~~lp~gldt~v~e~G~~LSgGQrQrlalARAL 1039 (1139)
+|+||++. ...++.+|... ..+..+++++.++++..++.+ .... ....||||||||++||||+
T Consensus 575 gyv~Q~~~-~~l~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~~~~~-----------~~~~LSgGqkqRvaLAraL 642 (718)
T PLN03073 575 AVFSQHHV-DGLDLSSNPLLYMMRCFPGVPEQKLRAHLGSFGVTGNLALQ-----------PMYTLSGGQKSRVAFAKIT 642 (718)
T ss_pred EEEecccc-ccCCcchhHHHHHHHhcCCCCHHHHHHHHHHCCCChHHhcC-----------CccccCHHHHHHHHHHHHH
Confidence 99999973 22345555321 112345778899999998863 2221 2357999999999999999
Q ss_pred cCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEE-EecChh
Q 048639 1040 LKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVV-EMGSHS 1117 (1139)
Q Consensus 1040 lr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~iv-e~G~~~ 1117 (1139)
+.+|++|||||||++||+.+...+.+.|++. ++ |||+|||+++.+.. ||||++|++|+++ ..|+++
T Consensus 643 ~~~p~lLLLDEPT~~LD~~s~~~l~~~L~~~-----------~g-tvIivSHd~~~i~~~~drv~~l~~G~i~~~~g~~~ 710 (718)
T PLN03073 643 FKKPHILLLDEPSNHLDLDAVEALIQGLVLF-----------QG-GVLMVSHDEHLISGSVDELWVVSEGKVTPFHGTFH 710 (718)
T ss_pred hcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc-----------CC-EEEEEECCHHHHHHhCCEEEEEECCEEEEeCCCHH
Confidence 9999999999999999999999999998753 23 59999999999986 9999999999998 568877
Q ss_pred HHh
Q 048639 1118 TLV 1120 (1139)
Q Consensus 1118 eLl 1120 (1139)
+..
T Consensus 711 ~~~ 713 (718)
T PLN03073 711 DYK 713 (718)
T ss_pred HHH
Confidence 653
No 96
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4e-64 Score=572.33 Aligned_cols=462 Identities=27% Similarity=0.417 Sum_probs=357.0
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHH-Hhcc
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKS-LRKN 334 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~-~~~~ 334 (1139)
-++++|++++|++ .++|+||||++.+||++|++|+||||||||+|.|+|.|+|++|+|.+||++....++.+ ....
T Consensus 8 ll~~~~i~K~Fgg---V~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~~G~I~~~G~~~~~~sp~~A~~~G 84 (500)
T COG1129 8 LLELRGISKSFGG---VKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPDSGEILIDGKPVAFSSPRDALAAG 84 (500)
T ss_pred eeeeecceEEcCC---ceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCCCceEEECCEEccCCCHHHHHhCC
Confidence 4889999999974 56999999999999999999999999999999999999999999999999998777654 5578
Q ss_pred eEEEecCCCCCcc-cHHHHHhcCCCCCC-HHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHcc
Q 048639 335 IGAVSQEPSLFTG-SLMDNIKVGNMDAD-DEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVK 412 (1139)
Q Consensus 335 i~~v~Q~~~l~~~-ti~~ni~~g~~~~~-~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~ 412 (1139)
|+.|+||..|++. ||.|||.+|++... .--+.+......+.+.+.++... ........+||+||||-|+||||+..
T Consensus 85 I~~V~QEl~L~p~LsVaeNifLgre~~~~~g~id~~~m~~~A~~~l~~lg~~--~~~~~~v~~LsiaqrQ~VeIArAl~~ 162 (500)
T COG1129 85 IATVHQELSLVPNLSVAENIFLGREPTRRFGLIDRKAMRRRARELLARLGLD--IDPDTLVGDLSIAQRQMVEIARALSF 162 (500)
T ss_pred cEEEeechhccCCccHHHHhhcccccccCCCccCHHHHHHHHHHHHHHcCCC--CChhhhhhhCCHHHHHHHHHHHHHhc
Confidence 9999999999975 99999999976432 11111222222333456666322 22566677999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCCeEEEEecCccchhc-cCEEEEEeCcEEEEecCh-hhhhccchHHHH
Q 048639 413 NPPILLLDEATSALDSESEKLVQEALERAM-QGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTH-HSLLQTSDFYNR 489 (1139)
Q Consensus 413 ~~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~-~~l~~~~~~~~~ 489 (1139)
+++|+|||||||+|+....+.+.+.+++++ +|.++|+||||++++.. ||||.||.||+.+..++. .++-.
T Consensus 163 ~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk~~Gv~ii~ISHrl~Ei~~i~DritVlRDG~~v~~~~~~~~~~~------- 235 (500)
T COG1129 163 DARVLILDEPTAALTVKETERLFDLIRRLKAQGVAIIYISHRLDEVFEIADRITVLRDGRVVGTRPTAAETSE------- 235 (500)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHhcCEEEEEeCCEEeeecccccCCCH-------
Confidence 999999999999999999999999998876 59999999999999976 999999999999866542 21100
Q ss_pred HHhhccCCCCCCcCcccccccccccchhhhhhhcccCchhhhhhcccccchhhhcccccchhhHHHHhhchhhHHHHHHH
Q 048639 490 LFTMQNLRPIDDSRTKASTVESTSTEQQISVVEQLEEPEESKRELSASTGQEEVKGKRTTIFFRIWFCLNERELLRLVVG 569 (1139)
Q Consensus 490 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 569 (1139)
+ . + ..++
T Consensus 236 ---------------------------------------------------~-~----------l---------v~~M-- 242 (500)
T COG1129 236 ---------------------------------------------------D-E----------L---------VRLM-- 242 (500)
T ss_pred ---------------------------------------------------H-H----------H---------HHHh--
Confidence 0 0 0 0000
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 048639 570 TVAAAFSGISKPLFGFFIITIGVAYYDPQAKQEVGWYSLAFSLVGLFSLFTHTLQHYFFGVVGEKAMTNLRRTLYTGVLR 649 (1139)
Q Consensus 570 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~ 649 (1139)
T Consensus 243 -------------------------------------------------------------------------------- 242 (500)
T COG1129 243 -------------------------------------------------------------------------------- 242 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCcccccCCCChhHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHh
Q 048639 650 NEIAWFEKPQNDAGSLTSRIVSDTSMVKAIISDRMSVIVQCISSILIATIVSLVVDWRMALVAWAVMPCHFIGGLIQAKS 729 (1139)
Q Consensus 650 ~~~~ff~~~~~~~G~i~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~~~~~p~~~~~~~~~~~~ 729 (1139)
.|+
T Consensus 243 ------------vGr----------------------------------------------------------------- 245 (500)
T COG1129 243 ------------VGR----------------------------------------------------------------- 245 (500)
T ss_pred ------------hCc-----------------------------------------------------------------
Confidence 000
Q ss_pred hhchhhhHHHHHHHHHHHHHHhhcchHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 730 AQGFSGDSAAAHTEFISLTSESASNIRTVASFCHEENILQKAKISLEKTKRSSRKESIKYGVIQGFSLCLWNIAHAVALW 809 (1139)
Q Consensus 730 ~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 (1139)
T Consensus 246 -------------------------------------------------------------------------------- 245 (500)
T COG1129 246 -------------------------------------------------------------------------------- 245 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCccccEEEE
Q 048639 810 YTAVLIDKKQATFRDGIRAYQIFSLTVPSITELWTLIPTVISAITVLAPAFEILDRKTEIEPDAPESSESGRIKGRIEFQ 889 (1139)
Q Consensus 810 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~ 889 (1139)
+.-+..++ . ... ......++++
T Consensus 246 ---------------------------------------------------~~~~~~~~-~-~~~-----~~~~~~l~v~ 267 (500)
T COG1129 246 ---------------------------------------------------ELEDLFPE-P-PEE-----GIGEPVLEVR 267 (500)
T ss_pred ---------------------------------------------------chhhhccc-c-ccc-----CCCCcEEEEe
Confidence 00000010 0 000 0001236788
Q ss_pred eEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChH-HHhhhceEEc
Q 048639 890 NIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLR-RLRSQIGLVQ 968 (1139)
Q Consensus 890 nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~-~lR~~i~~V~ 968 (1139)
|++.. ..++|+||++++||.+||.|--|||+|-++.+|+|..++.+|+|.+||.++.--++. ..+..|+|||
T Consensus 268 ~l~~~-------~~~~dvSf~vr~GEIlGiaGLvGaGRTEl~~~lfG~~~~~~G~i~l~G~~v~~~sp~~Ai~~Gi~~v~ 340 (500)
T COG1129 268 NLSGG-------GKVRDVSFTVRAGEILGIAGLVGAGRTELARALFGARPASSGEILLDGKPVRIRSPRDAIKAGIAYVP 340 (500)
T ss_pred cCCCC-------CceeCceeEEeCCcEEEEeccccCCHHHHHHHHhCCCcCCCceEEECCEEccCCCHHHHHHcCCEeCC
Confidence 87642 158999999999999999999999999999999999989999999999988777655 6888999999
Q ss_pred ccc----ccccccHHHHhccCC-CcCCHH-HHHHHHHHcCchHHHhhCC---CCccccccCCCCCCChHHHHHHHHHHHh
Q 048639 969 QEP----LLFSCSIRNNICYGN-EAASEA-EIVEVSKKANIHDFISSLP---DGYDTVVGEKGCQLSGGQKQRIAIARTL 1039 (1139)
Q Consensus 969 Qdp----~LF~gTIreNL~~~~-~~~sd~-ei~~al~~~~l~~~i~~lp---~gldt~v~e~G~~LSgGQrQrlalARAL 1039 (1139)
-|- .+...||++|+.+.. ...+.. -+...-++.-..+++.+|. .+.+.++ .+||||.+|+++|||+|
T Consensus 341 EDRk~~Gl~l~~sI~~Ni~l~~l~~~~~~~~i~~~~e~~~~~~~~~~l~Ik~~s~~~~v----~~LSGGNQQKVvlarwL 416 (500)
T COG1129 341 EDRKSEGLVLDMSIAENITLASLRRFSRRGLIDRRKERALAERYIRRLRIKTPSPEQPI----GTLSGGNQQKVVLARWL 416 (500)
T ss_pred cccccCcCcCCCcHHHheehHhhhhhccccccChHHHHHHHHHHHHhcCcccCCccchh----hcCCchhhhhHHHHHHH
Confidence 876 355779999998652 111100 2334444444556666652 2344555 47999999999999999
Q ss_pred cCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEEEecChh
Q 048639 1040 LKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVVEMGSHS 1117 (1139)
Q Consensus 1040 lr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~ 1117 (1139)
..+|+||||||||.++|..+.+.|.+.|+++. .++.+||+||-.+..+.. ||||+||.+|+|+..=+.+
T Consensus 417 ~~~p~vLilDEPTRGIDVGAK~eIy~li~~lA---------~~G~ail~iSSElpEll~~~DRIlVm~~Gri~~e~~~~ 486 (500)
T COG1129 417 ATDPKVLILDEPTRGIDVGAKAEIYRLIRELA---------AEGKAILMISSELPELLGLSDRILVMREGRIVGELDRE 486 (500)
T ss_pred hcCCCEEEECCCCcCcccchHHHHHHHHHHHH---------HCCCEEEEEeCChHHHHhhCCEEEEEECCEEEEEeccc
Confidence 99999999999999999999999999999886 455669999999999985 9999999999998753333
No 97
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=1.3e-63 Score=603.91 Aligned_cols=438 Identities=23% Similarity=0.346 Sum_probs=321.4
Q ss_pred eEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEE-----------ECCccCCCCCHH
Q 048639 261 DVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDIL-----------IDSLNIKDLDLK 329 (1139)
Q Consensus 261 ~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~-----------~~g~~~~~~~~~ 329 (1139)
+++++|+. +..+|++++ .+++||+++|+||||||||||+++|+|+++|++|+|. ++|.++.+...+
T Consensus 78 ~~~~~yg~--~~~~L~~l~-~i~~Gev~gLvG~NGaGKSTLlkiL~G~l~p~~G~i~~~~~~~~~~~~~~G~~l~~~~~~ 154 (590)
T PRK13409 78 EPVHRYGV--NGFKLYGLP-IPKEGKVTGILGPNGIGKTTAVKILSGELIPNLGDYEEEPSWDEVLKRFRGTELQNYFKK 154 (590)
T ss_pred CceEEecC--CceeEecCC-cCCCCCEEEEECCCCCCHHHHHHHHhCCccCCCccccCCCcHHHHHHHhCChHHHHHHHH
Confidence 48899963 235999999 9999999999999999999999999999999999997 899887543211
Q ss_pred --HHhcc----eEEEecCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHH
Q 048639 330 --SLRKN----IGAVSQEPSLFTGSLMDNIKVGNMDADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQR 403 (1139)
Q Consensus 330 --~~~~~----i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqR 403 (1139)
..+.+ +.|++|.|.+|.+|++||+.... ..+ .+.+.++.+ |++........+||||||||
T Consensus 155 ~~~~~~~~~~~~q~~~~~p~~~~~tv~e~l~~~~---~~~---------~~~~~l~~l--~l~~~~~~~~~~LSgGe~qr 220 (590)
T PRK13409 155 LYNGEIKVVHKPQYVDLIPKVFKGKVRELLKKVD---ERG---------KLDEVVERL--GLENILDRDISELSGGELQR 220 (590)
T ss_pred HhccCcceeecccchhhhhhhhcchHHHHHHhhh---HHH---------HHHHHHHHc--CCchhhcCChhhCCHHHHHH
Confidence 11123 44555667778889999997421 011 122344444 44445567778999999999
Q ss_pred HHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhc
Q 048639 404 IAIARAIVKNPPILLLDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQ 482 (1139)
Q Consensus 404 i~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 482 (1139)
++|||||+++|++||||||||+||+.+...+.+.|+++.+++|+|+|||+++.+.. ||+|++|+++. |.+.....
T Consensus 221 v~ia~al~~~p~lllLDEPts~LD~~~~~~l~~~i~~l~~g~tvIivsHd~~~l~~~~D~v~vl~~~~----g~~g~~~~ 296 (590)
T PRK13409 221 VAIAAALLRDADFYFFDEPTSYLDIRQRLNVARLIRELAEGKYVLVVEHDLAVLDYLADNVHIAYGEP----GAYGVVSK 296 (590)
T ss_pred HHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCc----cccceecc
Confidence 99999999999999999999999999999999999987668999999999999976 99999997631 10000000
Q ss_pred cchHHHHHHhhccCCCCCCcCcccccccccccchhhhhhhcccCchhhhhhcccccchhhhcccccchhhHHHHhhchhh
Q 048639 483 TSDFYNRLFTMQNLRPIDDSRTKASTVESTSTEQQISVVEQLEEPEESKRELSASTGQEEVKGKRTTIFFRIWFCLNERE 562 (1139)
Q Consensus 483 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (1139)
+ . . . +..
T Consensus 297 -------------------------~---~--------------------------~----------------~---~~~ 303 (590)
T PRK13409 297 -------------------------P---K--------------------------G----------------V---RVG 303 (590)
T ss_pred -------------------------h---h--------------------------H----------------H---HHh
Confidence 0 0 0 0 000
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 563 LLRLVVGTVAAAFSGISKPLFGFFIITIGVAYYDPQAKQEVGWYSLAFSLVGLFSLFTHTLQHYFFGVVGEKAMTNLRRT 642 (1139)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 642 (1139)
. .. | ...
T Consensus 304 ---------------i-------------~~------------~----------------~~~----------------- 310 (590)
T PRK13409 304 ---------------I-------------NE------------Y----------------LKG----------------- 310 (590)
T ss_pred ---------------H-------------HH------------H----------------HHh-----------------
Confidence 0 00 0 000
Q ss_pred HHHHHHcCCCcccccCCCChhHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 048639 643 LYTGVLRNEIAWFEKPQNDAGSLTSRIVSDTSMVKAIISDRMSVIVQCISSILIATIVSLVVDWRMALVAWAVMPCHFIG 722 (1139)
Q Consensus 643 l~~~ll~~~~~ff~~~~~~~G~i~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~~~~~p~~~~~ 722 (1139)
|. ..
T Consensus 311 ------------~~--~~-------------------------------------------------------------- 314 (590)
T PRK13409 311 ------------YL--PE-------------------------------------------------------------- 314 (590)
T ss_pred ------------cc--hh--------------------------------------------------------------
Confidence 00 00
Q ss_pred HHHHHHhhhchhhhHHHHHHHHHHHHHHhhcchHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 723 GLIQAKSAQGFSGDSAAAHTEFISLTSESASNIRTVASFCHEENILQKAKISLEKTKRSSRKESIKYGVIQGFSLCLWNI 802 (1139)
Q Consensus 723 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 802 (1139)
|. ++ + +
T Consensus 315 ---------------------------e~------~~-----------~--------~---------------------- 320 (590)
T PRK13409 315 ---------------------------EN------MR-----------I--------R---------------------- 320 (590)
T ss_pred ---------------------------hh------hh-----------c--------c----------------------
Confidence 00 00 0 0
Q ss_pred HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCc
Q 048639 803 AHAVALWYTAVLIDKKQATFRDGIRAYQIFSLTVPSITELWTLIPTVISAITVLAPAFEILDRKTEIEPDAPESSESGRI 882 (1139)
Q Consensus 803 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~ 882 (1139)
.... . ....+ +... . ..
T Consensus 321 --------------~~~~----------------------------------------~-~~~~~---~~~~--~---~~ 337 (590)
T PRK13409 321 --------------PEPI----------------------------------------E-FEERP---PRDE--S---ER 337 (590)
T ss_pred --------------ccCc----------------------------------------c-eecCC---Cccc--c---CC
Confidence 0000 0 00000 0000 0 00
Q ss_pred cccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhh
Q 048639 883 KGRIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRS 962 (1139)
Q Consensus 883 ~g~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~ 962 (1139)
...++++|++++|++ ..|+++||+|++||++||+|+||||||||+++|.|+.+|++|+|.++ +
T Consensus 338 ~~~l~~~~ls~~~~~----~~l~~~s~~i~~Geiv~l~G~NGsGKSTLlk~L~Gl~~p~~G~I~~~---~---------- 400 (590)
T PRK13409 338 ETLVEYPDLTKKLGD----FSLEVEGGEIYEGEVIGIVGPNGIGKTTFAKLLAGVLKPDEGEVDPE---L---------- 400 (590)
T ss_pred ceEEEEcceEEEECC----EEEEecceEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEEe---e----------
Confidence 124899999999953 25999999999999999999999999999999999999999999986 1
Q ss_pred hceEEcccccc-ccccHHHHhccCCCcC-CHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhc
Q 048639 963 QIGLVQQEPLL-FSCSIRNNICYGNEAA-SEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIARTLL 1040 (1139)
Q Consensus 963 ~i~~V~Qdp~L-F~gTIreNL~~~~~~~-sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalARALl 1040 (1139)
+++|+||++.+ ++.|+++|+.++.... .+..+.++++..++.+..++ + ...||||||||++|||||+
T Consensus 401 ~i~y~~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~L~~l~l~~~~~~-------~----~~~LSGGe~QRvaiAraL~ 469 (590)
T PRK13409 401 KISYKPQYIKPDYDGTVEDLLRSITDDLGSSYYKSEIIKPLQLERLLDK-------N----VKDLSGGELQRVAIAACLS 469 (590)
T ss_pred eEEEecccccCCCCCcHHHHHHHHhhhcChHHHHHHHHHHCCCHHHHhC-------C----cccCCHHHHHHHHHHHHHh
Confidence 59999999865 4679999998653222 23456778888888765433 2 2469999999999999999
Q ss_pred CCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEEEecC
Q 048639 1041 KRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVVEMGS 1115 (1139)
Q Consensus 1041 r~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~ 1115 (1139)
++|+||||||||++||+++...+.+.|+++.. ..++|+|+|||+++.+.. ||||++|++ ++...|+
T Consensus 470 ~~p~llLLDEPt~~LD~~~~~~l~~~l~~l~~--------~~g~tviivsHD~~~~~~~aDrvivl~~-~~~~~g~ 536 (590)
T PRK13409 470 RDADLYLLDEPSAHLDVEQRLAVAKAIRRIAE--------EREATALVVDHDIYMIDYISDRLMVFEG-EPGKHGH 536 (590)
T ss_pred cCCCEEEEeCCccCCCHHHHHHHHHHHHHHHH--------hCCCEEEEEeCCHHHHHHhCCEEEEEcC-cceeeee
Confidence 99999999999999999999999999998641 224569999999999876 999999964 8877665
No 98
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=100.00 E-value=2.5e-61 Score=588.84 Aligned_cols=435 Identities=18% Similarity=0.220 Sum_probs=342.8
Q ss_pred HcCCcccccccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 21 IGGEVGAFDTDLSTGKVITGVSSHMSVIRDAIGEKLGHFLSSFATFFSGVLIAVICCWEVSLLIFLVVPMILVIGATYTK 100 (1139)
Q Consensus 21 l~~~~~~f~~~~~~G~l~~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~l~~l~~~~~~~~~~~~~~~ 100 (1139)
+++|+++|+++ ++|++++|+++|++.+..++. .++.++..++.+++.++++++++|.+++++++++|+++++..++.+
T Consensus 92 l~~~~~~~~~~-~~g~~lsrl~~dv~~i~~~~~-~l~~~~~~~~~~i~~~~~l~~~~~~l~li~l~~~~~~~~i~~~~~~ 169 (547)
T PRK10522 92 LDTHVERIEQL-GSASLLASLTSDVRNITIAFV-RLPELVQGIILTLGSAAYLAWLSPKMLLVTAIWMAVTIWGGFVLVA 169 (547)
T ss_pred HhCCHHHHhcc-CccchHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999987 899999999999999998765 4677888888889899999999999999999999998888899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccc---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 101 RMNAVSATKLLYLSEATSMIEQTISQIKTVFAFVGE---RSEIKSFSDCMDKQIIISRGEALIKGVGLGMFQSVTFCCWA 177 (1139)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (1139)
+.++..++.++..+++.+.+.|.++|+++++ ++.+ +.+.+++.+..++..+...+..........+..++......
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (547)
T PRK10522 170 RVYKHMATLRETEDKLYNDYQTVLEGRKELT-LNRERAEYVFENEYEPDAQEYRHHIIRADTFHLSAVNWSNIMMLGAIG 248 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHhhh-ccHHHHHHHHHHHHhHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999996 4433 45677888877777666555544444333332222222222
Q ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccCCCCccccCCCccE
Q 048639 178 LIIWVGAVVVTAKRSTGGEVLAAVMSILFGAIALTYAAPDMQVFNQAKAAGFEIFQVIQRKPRISYSSKGKELEKIDGNI 257 (1139)
Q Consensus 178 ~~~~~g~~~v~~~~l~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~~~~~~~~~~i 257 (1139)
+.++++... +..+.+.+..+.++......|+..+...+..++.+..+.+|+.++++.+++.... .... .+..+.|
T Consensus 249 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~l~~~~~~~~~~-~~~~-~~~~~~i 323 (547)
T PRK10522 249 LVFYMANSL---GWADTNVAATYSLTLLFLRTPLLSAVGALPTLLSAQVAFNKLNKLALAPYKAEFP-RPQA-FPDWQTL 323 (547)
T ss_pred HHHHHHHHh---hcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccc-cccc-cCcCceE
Confidence 222222221 1123333333333344456799999999999999999999999987543321111 1111 1112469
Q ss_pred EEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcceEE
Q 048639 258 DIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNIGA 337 (1139)
Q Consensus 258 ~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 337 (1139)
+++||+|+|++ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.+||+++++.+.+++|++|+|
T Consensus 324 ~~~~v~f~y~~--~~~~l~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 401 (547)
T PRK10522 324 ELRNVTFAYQD--NGFSVGPINLTIKRGELLFLIGGNGSGKSTLAMLLTGLYQPQSGEILLDGKPVTAEQPEDYRKLFSA 401 (547)
T ss_pred EEEEEEEEeCC--CCeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEECCCCCHHHHhhheEE
Confidence 99999999974 3469999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCCCccccc---cCCCCChHHHHHHHHHHHHccCC
Q 048639 338 VSQEPSLFTGSLMDNIKVGNMDADDEQIYNASMMANAHSFISQLPDQYSTELGQ---RGVQLSGGQKQRIAIARAIVKNP 414 (1139)
Q Consensus 338 v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~---~g~~LSgGqkqRi~lARal~~~~ 414 (1139)
|+|+|++|++|++|| + ++.+++++.++++. ++.+..+..++ +|.+||||||||++||||++++|
T Consensus 402 v~q~~~lf~~ti~~n---~-~~~~~~~~~~~~~~---------~~l~~~~~~~~~~~~G~~LSgGq~qRl~lARal~~~~ 468 (547)
T PRK10522 402 VFTDFHLFDQLLGPE---G-KPANPALVEKWLER---------LKMAHKLELEDGRISNLKLSKGQKKRLALLLALAEER 468 (547)
T ss_pred EecChhHHHHhhccc---c-CchHHHHHHHHHHH---------cCCchhhhccccCCCCCCCCHHHHHHHHHHHHHhcCC
Confidence 999999999999999 2 34455555544444 43333333333 37899999999999999999999
Q ss_pred CEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCCeEEEEecCccchhccCEEEEEeCcEEEEe-cChh
Q 048639 415 PILLLDEATSALDSESEKLVQEALERAM--QGRTVILIAHRMSTIVNADMIAVVEDGQVTET-GTHH 478 (1139)
Q Consensus 415 ~illlDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~-g~~~ 478 (1139)
++||||||||+||+++++.+.+.+.+.. +++|+|+||||++.+..||+|++|++|++++. |++.
T Consensus 469 ~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~e~~~~~~ 535 (547)
T PRK10522 469 DILLLDEWAADQDPHFRREFYQVLLPLLQEMGKTIFAISHDDHYFIHADRLLEMRNGQLSELTGEER 535 (547)
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEEechHHHHhCCEEEEEECCEEEEecCCch
Confidence 9999999999999999999999887543 48999999999999999999999999999976 4433
No 99
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=3.7e-62 Score=573.71 Aligned_cols=485 Identities=28% Similarity=0.404 Sum_probs=348.1
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcce
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNI 335 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 335 (1139)
.|+++|++++|+ ++++|+|+||++.+|+++||||+||||||||+++|+|...|++|+|...+. .++
T Consensus 3 ~i~~~~ls~~~g---~~~l~~~~~l~~~~G~riGLvG~NGaGKSTLLkilaG~~~~~~G~i~~~~~-----------~~v 68 (530)
T COG0488 3 MITLENLSLAYG---DRPLLENVSLTLNPGERIGLVGRNGAGKSTLLKILAGELEPDSGEVTRPKG-----------LRV 68 (530)
T ss_pred eEEEeeeEEeeC---CceeecCCcceeCCCCEEEEECCCCCCHHHHHHHHcCCCcCCCCeEeecCC-----------ceE
Confidence 489999999996 356999999999999999999999999999999999999999999998752 269
Q ss_pred EEEecCCCCCcc-cHHHHHhcCCCCCCH--HHHHHHHH-------------------------HhcHHHHHHhCCCCCCc
Q 048639 336 GAVSQEPSLFTG-SLMDNIKVGNMDADD--EQIYNASM-------------------------MANAHSFISQLPDQYST 387 (1139)
Q Consensus 336 ~~v~Q~~~l~~~-ti~~ni~~g~~~~~~--~~~~~~~~-------------------------~~~~~~~i~~l~~g~~t 387 (1139)
+|++|++.+.+. ||.+.+..+...... .+...+.. .+.+...+..+ |+..
T Consensus 69 ~~l~Q~~~~~~~~tv~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gL--g~~~ 146 (530)
T COG0488 69 GYLSQEPPLDPEKTVLDYVIEGFGELRELLAELEEAYALLADPDDELLAELEALLEELDGWTLEARAEEALLGL--GFPD 146 (530)
T ss_pred EEeCCCCCcCCCccHHHHHHhhhHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHhhcccchHHHHHHHHhcC--CCCc
Confidence 999999999865 999999887532110 11111100 02222334444 3333
Q ss_pred cccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhc-cCEEEEE
Q 048639 388 ELGQRGVQLSGGQKQRIAIARAIVKNPPILLLDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVN-ADMIAVV 466 (1139)
Q Consensus 388 ~i~~~g~~LSgGqkqRi~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l 466 (1139)
. .....+||||||.|++|||||+.+||+|||||||++||.++..++.+.|.+. +| |+|+||||.+++.. |++|+.+
T Consensus 147 ~-~~~~~~LSGG~r~Rv~LA~aL~~~pDlLLLDEPTNHLD~~~i~WLe~~L~~~-~g-tviiVSHDR~FLd~V~t~I~~l 223 (530)
T COG0488 147 E-DRPVSSLSGGWRRRVALARALLEEPDLLLLDEPTNHLDLESIEWLEDYLKRY-PG-TVIVVSHDRYFLDNVATHILEL 223 (530)
T ss_pred c-cCchhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHhC-CC-cEEEEeCCHHHHHHHhhheEEe
Confidence 3 5566899999999999999999999999999999999999999999999864 45 99999999999988 9999999
Q ss_pred eCcEEE-EecChhhhhccchHHHHHHhhccCCCCCCcCcccccccccccchhhhhhhcccCchhhhhhcccccchhhhcc
Q 048639 467 EDGQVT-ETGTHHSLLQTSDFYNRLFTMQNLRPIDDSRTKASTVESTSTEQQISVVEQLEEPEESKRELSASTGQEEVKG 545 (1139)
Q Consensus 467 ~~G~i~-~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (1139)
+.|++. +.|+++..++....-..... ... . .++
T Consensus 224 d~g~l~~y~Gny~~~~~~r~~~~~~~~-------------------------~~~----------~-------~~~---- 257 (530)
T COG0488 224 DRGKLTPYKGNYSSYLEQKAERLRQEA-------------------------AAY----------E-------KQQ---- 257 (530)
T ss_pred cCCceeEecCCHHHHHHHHHHHHHHHH-------------------------HHH----------H-------HHH----
Confidence 999875 45666654332110000000 000 0 000
Q ss_pred cccchhhHHHHhhchhhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 546 KRTTIFFRIWFCLNERELLRLVVGTVAAAFSGISKPLFGFFIITIGVAYYDPQAKQEVGWYSLAFSLVGLFSLFTHTLQH 625 (1139)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (1139)
......
T Consensus 258 ---~~~~~~----------------------------------------------------------------------- 263 (530)
T COG0488 258 ---KELAKE----------------------------------------------------------------------- 263 (530)
T ss_pred ---HHHHHH-----------------------------------------------------------------------
Confidence 000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCcccccCCCChhHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 048639 626 YFFGVVGEKAMTNLRRTLYTGVLRNEIAWFEKPQNDAGSLTSRIVSDTSMVKAIISDRMSVIVQCISSILIATIVSLVVD 705 (1139)
Q Consensus 626 ~~~~~~~~~~~~~l~~~l~~~ll~~~~~ff~~~~~~~G~i~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 705 (1139)
T Consensus 264 -------------------------------------------------------------------------------- 263 (530)
T COG0488 264 -------------------------------------------------------------------------------- 263 (530)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHHHHHHhhcchHHHHhhcchHHHHHHHHHHHHHHHHHHHHH
Q 048639 706 WRMALVAWAVMPCHFIGGLIQAKSAQGFSGDSAAAHTEFISLTSESASNIRTVASFCHEENILQKAKISLEKTKRSSRKE 785 (1139)
Q Consensus 706 ~~l~lv~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~ 785 (1139)
..+.+++........+
T Consensus 264 -----------------------------------------------------------~~~i~r~~~~~~~~k~----- 279 (530)
T COG0488 264 -----------------------------------------------------------QEWIRRGKAAASKAKK----- 279 (530)
T ss_pred -----------------------------------------------------------HHHHHHHHhccchHHH-----
Confidence 0000000000000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hc
Q 048639 786 SIKYGVIQGFSLCLWNIAHAVALWYTAVLIDKKQATFRDGIRAYQIFSLTVPSITELWTLIPTVISAITVLAPAFEI-LD 864 (1139)
Q Consensus 786 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~-~~ 864 (1139)
..+.....+++.+. ..
T Consensus 280 ---------------------------------------------------------------a~sr~k~l~k~~~~~~~ 296 (530)
T COG0488 280 ---------------------------------------------------------------AKSRIKRLEKLEARLAE 296 (530)
T ss_pred ---------------------------------------------------------------HHHHHHHHHHHHhhhhh
Confidence 00000001111110 00
Q ss_pred cCCCCCCCCC--CCCCCC--CccccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccC
Q 048639 865 RKTEIEPDAP--ESSESG--RIKGRIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDP 940 (1139)
Q Consensus 865 ~~~~~~~~~~--~~~~~~--~~~g~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p 940 (1139)
..+....... .-.+++ ..+--++++|+++.|+++ .++++++||.|.+|++||||||||+|||||+++|.|-..|
T Consensus 297 ~~~~~~~~~~~~~f~~~~~~~g~~vl~~~~~~~~y~~~--~~l~~~~s~~i~~g~riaiiG~NG~GKSTLlk~l~g~~~~ 374 (530)
T COG0488 297 ERPVEEGKPLAFRFPPPGKRLGKLVLEFENVSKGYDGG--RLLLKDLSFRIDRGDRIAIVGPNGAGKSTLLKLLAGELGP 374 (530)
T ss_pred cccccccccceeeccCCcccCCCeeEEEeccccccCCC--ceeecCceEEecCCCEEEEECCCCCCHHHHHHHHhhhccc
Confidence 0111000000 000111 112359999999999643 5799999999999999999999999999999999999999
Q ss_pred CccEEEECCcccCCCChHHHhhhceEEcccc-ccc-cccHHHHhccCCCcCCHHHHHHHHHHcCchHHHhhCCCCccccc
Q 048639 941 NEGIILIDGKGIKEYNLRRLRSQIGLVQQEP-LLF-SCSIRNNICYGNEAASEAEIVEVSKKANIHDFISSLPDGYDTVV 1018 (1139)
Q Consensus 941 ~~G~I~idG~di~~~~l~~lR~~i~~V~Qdp-~LF-~gTIreNL~~~~~~~sd~ei~~al~~~~l~~~i~~lp~gldt~v 1018 (1139)
.+|+|.+.- .+ ++||.+|+- .++ +.|+.|++.-..|+..+.++...|.+.++..- ...++|
T Consensus 375 ~~G~v~~g~-~v----------~igyf~Q~~~~l~~~~t~~d~l~~~~~~~~e~~~r~~L~~f~F~~~------~~~~~v 437 (530)
T COG0488 375 LSGTVKVGE-TV----------KIGYFDQHRDELDPDKTVLEELSEGFPDGDEQEVRAYLGRFGFTGE------DQEKPV 437 (530)
T ss_pred CCceEEeCC-ce----------EEEEEEehhhhcCccCcHHHHHHhhCccccHHHHHHHHHHcCCChH------HHhCch
Confidence 999998853 22 499999998 444 44899999876665568899999999888543 223444
Q ss_pred cCCCCCCChHHHHHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc
Q 048639 1019 GEKGCQLSGGQKQRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN 1098 (1139)
Q Consensus 1019 ~e~G~~LSgGQrQrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~ 1098 (1139)
..||||||-|+.||+.++.+|.+|||||||.+||.+|...+.++|.++ .+| ||+|||+...+..
T Consensus 438 ----~~LSGGEk~Rl~La~ll~~~pNvLiLDEPTNhLDi~s~~aLe~aL~~f-----------~Gt-vl~VSHDr~Fl~~ 501 (530)
T COG0488 438 ----GVLSGGEKARLLLAKLLLQPPNLLLLDEPTNHLDIESLEALEEALLDF-----------EGT-VLLVSHDRYFLDR 501 (530)
T ss_pred ----hhcCHhHHHHHHHHHHhccCCCEEEEcCCCccCCHHHHHHHHHHHHhC-----------CCe-EEEEeCCHHHHHh
Confidence 469999999999999999999999999999999999999999999875 345 9999999999988
Q ss_pred -CCEEEEEeCCEEEEe-cChhHHhhc
Q 048639 1099 -SDVIVVMDKGEVVEM-GSHSTLVAE 1122 (1139)
Q Consensus 1099 -~DrI~vl~~G~ive~-G~~~eLl~~ 1122 (1139)
|++|+++++ ++.++ |++++..+.
T Consensus 502 va~~i~~~~~-~~~~~~g~y~~y~~~ 526 (530)
T COG0488 502 VATRIWLVED-KVEEFEGGYEDYLEQ 526 (530)
T ss_pred hcceEEEEcC-ceeEcCCCHHHHHHh
Confidence 999999999 88887 888888754
No 100
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei.
Probab=100.00 E-value=3e-60 Score=586.02 Aligned_cols=513 Identities=14% Similarity=0.130 Sum_probs=413.9
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCchhh---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 565 RLVVGTVAAAFSGISKPLFGFFIITIGVAYYDPQAK---QEVGWYSLAFSLVGLFSLFTHTLQHYFFGVVGEKAMTNLRR 641 (1139)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 641 (1139)
.+++.+++.++...+....+++.+.+++.....+.. .....+.++++++.++..+..++..++......+...++|+
T Consensus 97 ~l~~~~~~~~~~t~~~l~~~~l~~~iid~l~~~~~~~f~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~l~~ 176 (659)
T TIGR00954 97 LLILIAFLLVSRTYLSVYVATLDGQIESSIVRRSPRNFAWILFKWFLIAPPASFINSAIKYLLKELKLRFRVRLTRYLYS 176 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455555555555666666666666666654332111 11223444455556666677777777778888888999999
Q ss_pred HHHHHHHcCCCcccccCCCChhHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHH
Q 048639 642 TLYTGVLRNEIAWFEKPQNDAGSLTSRIVSDTSMVKAIISDRMSVIVQCISSILIATIVSLV-VDWRMALVAWAVMPCHF 720 (1139)
Q Consensus 642 ~l~~~ll~~~~~ff~~~~~~~G~i~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~l~lv~~~~~p~~~ 720 (1139)
+.+++....++.|||. ++|++++|+++|++.+.+.+...+..++..++.++++++.++. .+|.+++++++.+|+.+
T Consensus 177 ~~~~~~~~~~~~~~d~---~~g~~~srlt~Dv~~i~~~~~~~~~~l~~~~~~ii~~~~~L~~~~~~~l~l~~l~~~~l~~ 253 (659)
T TIGR00954 177 KYLSGFTFYKVSNLDS---RIQNPDQLLTQDVEKFCDSVVELYSNLTKPILDVILYSFKLLTALGSVGPAGLFAYLFATG 253 (659)
T ss_pred HHhCCCceEEeccCCC---CCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 9999988899999983 6899999999999999999999999999999999988877775 99999999999999999
Q ss_pred HHHHHHHHhhhchhhhHHHHHHHHHHHHHHhhcchHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 721 IGGLIQAKSAQGFSGDSAAAHTEFISLTSESASNIRTVASFCHEENILQKAKISLEKTKRSSRKESIKYGVIQGFSLCLW 800 (1139)
Q Consensus 721 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 (1139)
++..++.+...+..++.++..+.+.+.+.|.++|+++||+|+.++.+.+++.+..++..+...+.....+....+...+.
T Consensus 254 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~I~~~~~e~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~ 333 (659)
T TIGR00954 254 VVLTKLRPPIGKLTVEEQALEGEYRYVHSRLIMNSEEIAFYQGNKVEKETVMSSFYRLVEHLNLIIKFRFSYGFLDNIVA 333 (659)
T ss_pred HHHHHHccchhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 99999999888889999999999999999999999999999999999999999999988888877777666666665554
Q ss_pred HH--HHHHHHHHHHHHHh-c----CCCCHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 048639 801 NI--AHAVALWYTAVLID-K----KQATFRDGIRAYQ----IFSLTVPSITELWTLIPTVISAITVLAPAFEILDRKTEI 869 (1139)
Q Consensus 801 ~~--~~~~~~~~~~~l~~-~----~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~ 869 (1139)
.. ..++.++.+...+. . |.++.+..+..+. ++.....++..+.....++..+..+.+|+.++++.+++.
T Consensus 334 ~~~~~~~~~~~~g~~~~~~~~~~~g~~t~g~~~~~f~~~~~~~~~l~~~~~~l~~~~~~i~~~~~~~~Ri~~ll~~~~~~ 413 (659)
T TIGR00954 334 KYTWSAVGLVAVSIPIFDKTHPAFLEMSEEELMQEFYNNGRLLLKAADALGRLMLAGRDMTRLAGFTARVDTLLQVLDDV 413 (659)
T ss_pred HHHHHHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 32 22222333332332 2 6788887655333 244557788889999999999999999999998754332
Q ss_pred CC------CCCC--C--------------CCCCCccccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCH
Q 048639 870 EP------DAPE--S--------------SESGRIKGRIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGK 927 (1139)
Q Consensus 870 ~~------~~~~--~--------------~~~~~~~g~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGK 927 (1139)
.. ..+. . .......+.|+++||+|+|+++ .++|+|+||+|++||++||+|||||||
T Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nv~~~~~~~--~~il~~isl~i~~Ge~~~IvG~nGsGK 491 (659)
T TIGR00954 414 KSGNFKRPRVEEIESGREGGRNSNLVPGRGIVEYQDNGIKFENIPLVTPNG--DVLIESLSFEVPSGNHLLICGPNGCGK 491 (659)
T ss_pred hcccccccccccccccccccccccccccccccccCCCeEEEEeeEEECCCC--CeeeecceEEECCCCEEEEECCCCCCH
Confidence 10 0000 0 0001134579999999999742 369999999999999999999999999
Q ss_pred HHHHHHHhccccCCccEEEECCcccCCCChHHHhhhceEEccccccccccHHHHhccCC-------CcCCHHHHHHHHHH
Q 048639 928 SSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQIGLVQQEPLLFSCSIRNNICYGN-------EAASEAEIVEVSKK 1000 (1139)
Q Consensus 928 STL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~~V~Qdp~LF~gTIreNL~~~~-------~~~sd~ei~~al~~ 1000 (1139)
|||+++|.|+++|++|+|.+|+ |++++||||+|.+|++|++||+.++. +..++++++++++.
T Consensus 492 STLl~lL~Gl~~~~~G~i~~~~-----------~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~i~~~l~~ 560 (659)
T TIGR00954 492 SSLFRILGELWPVYGGRLTKPA-----------KGKLFYVPQRPYMTLGTLRDQIIYPDSSEDMKRRGLSDKDLEQILDN 560 (659)
T ss_pred HHHHHHHhCCCCCCCCeEeecC-----------CCcEEEECCCCCCCCcCHHHHHhcCCChhhhhccCCCHHHHHHHHHH
Confidence 9999999999999999999874 67899999999999999999999863 34678899999999
Q ss_pred cCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCcccc
Q 048639 1001 ANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGEL 1080 (1139)
Q Consensus 1001 ~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~ 1080 (1139)
+++++++++ |.|+||..+ .+.+||||||||++||||++++|++||||||||+||+++++.+++.+++
T Consensus 561 ~~l~~~~~~-~~g~~~~~~-~~~~LSgGqkQRl~iARal~~~p~illLDEpts~LD~~~~~~l~~~l~~----------- 627 (659)
T TIGR00954 561 VQLTHILER-EGGWSAVQD-WMDVLSGGEKQRIAMARLFYHKPQFAILDECTSAVSVDVEGYMYRLCRE----------- 627 (659)
T ss_pred cCCHHHHhh-cCCcccccc-cccCCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHH-----------
Confidence 999999987 999999986 4679999999999999999999999999999999999999999999985
Q ss_pred CCCeEEEEEecCchhhhcCCEEEEEeC
Q 048639 1081 ASRTTQITVAHRLATVINSDVIVVMDK 1107 (1139)
Q Consensus 1081 ~~~tTvI~IaHrl~ti~~~DrI~vl~~ 1107 (1139)
. ++|+|+||||++++..||+|++|+.
T Consensus 628 ~-~~tvI~isH~~~~~~~~d~il~l~~ 653 (659)
T TIGR00954 628 F-GITLFSVSHRKSLWKYHEYLLYMDG 653 (659)
T ss_pred c-CCEEEEEeCchHHHHhCCEEEEEeC
Confidence 2 3459999999999999999999973
No 101
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=4.5e-61 Score=533.36 Aligned_cols=463 Identities=24% Similarity=0.434 Sum_probs=360.6
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCH-HHHhcc
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDL-KSLRKN 334 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~-~~~~~~ 334 (1139)
.++++++++.|| ...+++||||++++||+.||+|+||+|||||+++|.|+|+|++|+|.+||+++.-.++ +..+..
T Consensus 4 ~l~~~~itK~f~---~~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~P~~GeI~v~G~~v~~~sP~dA~~~G 80 (501)
T COG3845 4 ALEMRGITKRFP---GVVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQPDSGEIRVDGKEVRIKSPRDAIRLG 80 (501)
T ss_pred eEEEeccEEEcC---CEEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCcccCCcceEEECCEEeccCCHHHHHHcC
Confidence 589999999998 3569999999999999999999999999999999999999999999999999986655 567889
Q ss_pred eEEEecCCCCCcc-cHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHccC
Q 048639 335 IGAVSQEPSLFTG-SLMDNIKVGNMDADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVKN 413 (1139)
Q Consensus 335 i~~v~Q~~~l~~~-ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~~ 413 (1139)
||+|+|++.|++. |+.|||.+|.+......+..+.....+.+..++. |++-...+....||-||||||.|-+|||++
T Consensus 81 IGMVhQHF~Lv~~lTV~ENiiLg~e~~~~~~~~~~~~~~~i~~l~~~y--Gl~vdp~~~V~dLsVG~qQRVEIlKaLyr~ 158 (501)
T COG3845 81 IGMVHQHFMLVPTLTVAENIILGLEPSKGGLIDRRQARARIKELSERY--GLPVDPDAKVADLSVGEQQRVEILKALYRG 158 (501)
T ss_pred CcEEeeccccccccchhhhhhhcCccccccccCHHHHHHHHHHHHHHh--CCCCCccceeecCCcchhHHHHHHHHHhcC
Confidence 9999999999976 9999999998642111111112222233444444 555556778889999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhccchHHHHHH
Q 048639 414 PPILLLDEATSALDSESEKLVQEALERAM-QGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQTSDFYNRLF 491 (1139)
Q Consensus 414 ~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~ 491 (1139)
|++||||||||-|-|.....+++.++.+. .|+|||+|||++.++.. |||+-||.+||++..-++ ..+
T Consensus 159 a~iLILDEPTaVLTP~E~~~lf~~l~~l~~~G~tIi~ITHKL~Ev~~iaDrvTVLR~Gkvvgt~~~--~~~--------- 227 (501)
T COG3845 159 ARLLILDEPTAVLTPQEADELFEILRRLAAEGKTIIFITHKLKEVMAIADRVTVLRRGKVVGTVDP--VAE--------- 227 (501)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhhCeeEEEeCCeEEeeecC--CCC---------
Confidence 99999999999999999999999998875 59999999999999987 999999999998643221 000
Q ss_pred hhccCCCCCCcCcccccccccccchhhhhhhcccCchhhhhhcccccchhhhcccccchhhHHHHhhchhhHHHHHHHHH
Q 048639 492 TMQNLRPIDDSRTKASTVESTSTEQQISVVEQLEEPEESKRELSASTGQEEVKGKRTTIFFRIWFCLNERELLRLVVGTV 571 (1139)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 571 (1139)
. ..+ + + ..++
T Consensus 228 --------------------~--------------------------t~~-e----------l---------a~lM---- 237 (501)
T COG3845 228 --------------------T--------------------------TEE-E----------L---------AELM---- 237 (501)
T ss_pred --------------------C--------------------------CHH-H----------H---------HHHh----
Confidence 0 000 0 0 0000
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Q 048639 572 AAAFSGISKPLFGFFIITIGVAYYDPQAKQEVGWYSLAFSLVGLFSLFTHTLQHYFFGVVGEKAMTNLRRTLYTGVLRNE 651 (1139)
Q Consensus 572 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~~ 651 (1139)
T Consensus 238 -------------------------------------------------------------------------------- 237 (501)
T COG3845 238 -------------------------------------------------------------------------------- 237 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CcccccCCCChhHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 048639 652 IAWFEKPQNDAGSLTSRIVSDTSMVKAIISDRMSVIVQCISSILIATIVSLVVDWRMALVAWAVMPCHFIGGLIQAKSAQ 731 (1139)
Q Consensus 652 ~~ff~~~~~~~G~i~~r~~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~~~~~p~~~~~~~~~~~~~~ 731 (1139)
T Consensus 238 -------------------------------------------------------------------------------- 237 (501)
T COG3845 238 -------------------------------------------------------------------------------- 237 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred chhhhHHHHHHHHHHHHHHhhcchHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 732 GFSGDSAAAHTEFISLTSESASNIRTVASFCHEENILQKAKISLEKTKRSSRKESIKYGVIQGFSLCLWNIAHAVALWYT 811 (1139)
Q Consensus 732 ~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (1139)
T Consensus 238 -------------------------------------------------------------------------------- 237 (501)
T COG3845 238 -------------------------------------------------------------------------------- 237 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCccccEEEEeE
Q 048639 812 AVLIDKKQATFRDGIRAYQIFSLTVPSITELWTLIPTVISAITVLAPAFEILDRKTEIEPDAPESSESGRIKGRIEFQNI 891 (1139)
Q Consensus 812 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~nv 891 (1139)
....+. .+.+ .. ...+. .--++++|+
T Consensus 238 ----vG~~v~-------------------------------------------~~~~-~~----~~~pg--~~vL~V~~L 263 (501)
T COG3845 238 ----VGREVV-------------------------------------------LRVV-KP----PSTPG--EVVLEVEDL 263 (501)
T ss_pred ----cCCccc-------------------------------------------cccc-cC----CCCCC--CeEEEEeee
Confidence 000000 0000 00 00001 124899999
Q ss_pred EEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCccc-CCCChHHHh-hhceEEcc
Q 048639 892 KFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGI-KEYNLRRLR-SQIGLVQQ 969 (1139)
Q Consensus 892 sf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di-~~~~l~~lR-~~i~~V~Q 969 (1139)
+..=+ + +.+.+++|||+|++||.+||.|-.|-|-|.|+.+|.|+..|.+|+|.++|.|+ ...+....| ..++|||.
T Consensus 264 ~v~~~-~-~~~~v~~vs~~Vr~GEIvGIAGV~GNGQ~eL~eaisGlr~~~~G~I~l~G~~v~~~~~~~~~r~~G~~~VPe 341 (501)
T COG3845 264 SVKDR-R-GVTAVKDVSFEVRAGEIVGIAGVAGNGQSELVEAISGLRKPASGRILLNGKDVLGRLSPRERRRLGLAYVPE 341 (501)
T ss_pred EeecC-C-CCceeeeeeeEEecCcEEEEEecCCCCHHHHHHHHhCCCccCCceEEECCEeccccCCHHHHHhcCCccCCh
Confidence 98643 2 34689999999999999999999999999999999999999999999999997 667787766 56999999
Q ss_pred ccc----cccccHHHHhccCCCc---------CCHHHHHHHHHHcCchHHHhhC---CCCccccccCCCCCCChHHHHHH
Q 048639 970 EPL----LFSCSIRNNICYGNEA---------ASEAEIVEVSKKANIHDFISSL---PDGYDTVVGEKGCQLSGGQKQRI 1033 (1139)
Q Consensus 970 dp~----LF~gTIreNL~~~~~~---------~sd~ei~~al~~~~l~~~i~~l---p~gldt~v~e~G~~LSgGQrQrl 1033 (1139)
|.+ ..+-|+.||+.++... ..-.++.+..++ .++.+ +.+.++++ .+||||+.||+
T Consensus 342 dR~~~Glv~~~sl~eN~vL~~~~~~~~~~~g~l~~~~i~~~a~~-----li~~fdVr~~~~~~~a----~~LSGGNqQK~ 412 (501)
T COG3845 342 DRHGHGLVLDLSLAENLVLGRHDKKPFSRGGFLDRRAIRKFARE-----LIEEFDVRAPSPDAPA----RSLSGGNQQKL 412 (501)
T ss_pred hhccCccccCccHHHHhhhhhccccccccccccCHHHHHHHHHH-----HHHHcCccCCCCCcch----hhcCCcceehh
Confidence 984 5678999999765321 122333333222 22222 34555554 47999999999
Q ss_pred HHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEEE
Q 048639 1034 AIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVVE 1112 (1139)
Q Consensus 1034 alARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ive 1112 (1139)
-+||-|.++|++||..+||-+||..+.+.|++.|.+.. ..++.|+.|+-+|+.+.. ||||.||.+|+|+.
T Consensus 413 IlaREl~~~p~lLI~~qPTrGLDvgA~~~I~~~l~e~r---------~~G~AVLLiS~dLDEil~lsDrIaVi~~Gri~~ 483 (501)
T COG3845 413 ILARELARRPDLLIAAQPTRGLDVGAIEFIHERLLELR---------DAGKAVLLISEDLDEILELSDRIAVIYEGRIVG 483 (501)
T ss_pred hhhhhhccCCCEEEEcCCCccccHHHHHHHHHHHHHHH---------hcCCEEEEEehhHHHHHHhhheeeeeeCCceec
Confidence 99999999999999999999999999999999999876 455569999999999987 99999999999998
Q ss_pred ecChhH
Q 048639 1113 MGSHST 1118 (1139)
Q Consensus 1113 ~G~~~e 1118 (1139)
..++++
T Consensus 484 ~~~~~~ 489 (501)
T COG3845 484 IVPPEE 489 (501)
T ss_pred cccccc
Confidence 887776
No 102
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei.
Probab=100.00 E-value=1.7e-57 Score=561.65 Aligned_cols=427 Identities=15% Similarity=0.165 Sum_probs=364.0
Q ss_pred CCcccccccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-HhHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 23 GEVGAFDTDLSTGKVITGVSSHMSVIRDAIGEKLGHFLSSFATFFSGVLIAVI-CCWEVSLLIFLVVPMILVIGATYTKR 101 (1139)
Q Consensus 23 ~~~~~f~~~~~~G~l~~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~l~l~~l~~~~~~~~~~~~~~~~ 101 (1139)
.++.+||. ++|++++|+++|++.+.+.+...+..++.+++.+++.++.++. ++|.+++++++.+|+.+++..++.++
T Consensus 185 ~~~~~~d~--~~g~~~srlt~Dv~~i~~~~~~~~~~l~~~~~~ii~~~~~L~~~~~~~l~l~~l~~~~l~~~i~~~~~~~ 262 (659)
T TIGR00954 185 YKVSNLDS--RIQNPDQLLTQDVEKFCDSVVELYSNLTKPILDVILYSFKLLTALGSVGPAGLFAYLFATGVVLTKLRPP 262 (659)
T ss_pred EEeccCCC--CCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHccc
Confidence 45567774 5899999999999999999999999999999999888887776 99999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHH
Q 048639 102 MNAVSATKLLYLSEATSMIEQTISQIKTVFAFVGERSEIKSFSDCMDKQIIISRGEALIKGVGLGMFQSVTFC--CWALI 179 (1139)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 179 (1139)
+.+..++.++..++..+.+.|.++|+++||+|+.|+.+.+++++..++..+...+..++.+...++..++... ..++.
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~e~l~g~~~I~~~~~e~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 342 (659)
T TIGR00954 263 IGKLTVEEQALEGEYRYVHSRLIMNSEEIAFYQGNKVEKETVMSSFYRLVEHLNLIIKFRFSYGFLDNIVAKYTWSAVGL 342 (659)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999888888888877776542 22223
Q ss_pred HHHHHHHHH-h----CCCCHHHHHH-HHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcc-------
Q 048639 180 IWVGAVVVT-A----KRSTGGEVLA-AVMS---ILFGAIALTYAAPDMQVFNQAKAAGFEIFQVIQRKPRISY------- 243 (1139)
Q Consensus 180 ~~~g~~~v~-~----~~l~~g~~~~-~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~------- 243 (1139)
++.|...+. . |.+|.|.+++ ++.+ +..+..|+..+...+..++++.++.+|+.++++.+++...
T Consensus 343 ~~~g~~~~~~~~~~~g~~t~g~~~~~f~~~~~~~~~l~~~~~~l~~~~~~i~~~~~~~~Ri~~ll~~~~~~~~~~~~~~~ 422 (659)
T TIGR00954 343 VAVSIPIFDKTHPAFLEMSEEELMQEFYNNGRLLLKAADALGRLMLAGRDMTRLAGFTARVDTLLQVLDDVKSGNFKRPR 422 (659)
T ss_pred HHHHHHHHhcccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccc
Confidence 334443332 2 6799888766 4433 4455788999999999999999999999999975332110
Q ss_pred -CC-CC--------------ccccCCCccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHh
Q 048639 244 -SS-KG--------------KELEKIDGNIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVAR 307 (1139)
Q Consensus 244 -~~-~~--------------~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g 307 (1139)
.. .+ .......+.|+++|++|+|++ ++++|+|+||++++||+++|+||||||||||+++|+|
T Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nv~~~~~~--~~~il~~isl~i~~Ge~~~IvG~nGsGKSTLl~lL~G 500 (659)
T TIGR00954 423 VEEIESGREGGRNSNLVPGRGIVEYQDNGIKFENIPLVTPN--GDVLIESLSFEVPSGNHLLICGPNGCGKSSLFRILGE 500 (659)
T ss_pred cccccccccccccccccccccccccCCCeEEEEeeEEECCC--CCeeeecceEEECCCCEEEEECCCCCCHHHHHHHHhC
Confidence 00 00 001112346999999999974 2469999999999999999999999999999999999
Q ss_pred ccCCCccEEEECCccCCCCCHHHHhcceEEEecCCCCCcccHHHHHhcCC-------CCCCHHHHHHHHHHhcHHHHHHh
Q 048639 308 FYDPSNGDILIDSLNIKDLDLKSLRKNIGAVSQEPSLFTGSLMDNIKVGN-------MDADDEQIYNASMMANAHSFISQ 380 (1139)
Q Consensus 308 ~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~-------~~~~~~~~~~~~~~~~~~~~i~~ 380 (1139)
+++|++|+|.+++ +++++||||+|++|++|++|||.++. +..+++++.++++.+++++++++
T Consensus 501 l~~~~~G~i~~~~-----------~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~i~~~l~~~~l~~~~~~ 569 (659)
T TIGR00954 501 LWPVYGGRLTKPA-----------KGKLFYVPQRPYMTLGTLRDQIIYPDSSEDMKRRGLSDKDLEQILDNVQLTHILER 569 (659)
T ss_pred CCCCCCCeEeecC-----------CCcEEEECCCCCCCCcCHHHHHhcCCChhhhhccCCCHHHHHHHHHHcCCHHHHhh
Confidence 9999999999864 56899999999999999999999874 33567888999999999988877
Q ss_pred CCCCCCccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhcc
Q 048639 381 LPDQYSTELGQRGVQLSGGQKQRIAIARAIVKNPPILLLDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVNA 460 (1139)
Q Consensus 381 l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~ 460 (1139)
|.|+||..+ .+.+||||||||++||||++++|+++|||||||+||+++++.+.+.+++. ++|+|+||||++.++.|
T Consensus 570 -~~g~~~~~~-~~~~LSgGqkQRl~iARal~~~p~illLDEpts~LD~~~~~~l~~~l~~~--~~tvI~isH~~~~~~~~ 645 (659)
T TIGR00954 570 -EGGWSAVQD-WMDVLSGGEKQRIAMARLFYHKPQFAILDECTSAVSVDVEGYMYRLCREF--GITLFSVSHRKSLWKYH 645 (659)
T ss_pred -cCCcccccc-cccCCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHc--CCEEEEEeCchHHHHhC
Confidence 999999876 57799999999999999999999999999999999999999999998764 89999999999999899
Q ss_pred CEEEEEeC
Q 048639 461 DMIAVVED 468 (1139)
Q Consensus 461 d~i~~l~~ 468 (1139)
|++++|+.
T Consensus 646 d~il~l~~ 653 (659)
T TIGR00954 646 EYLLYMDG 653 (659)
T ss_pred CEEEEEeC
Confidence 99999973
No 103
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=1.2e-53 Score=470.29 Aligned_cols=237 Identities=30% Similarity=0.514 Sum_probs=221.4
Q ss_pred ccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhh
Q 048639 884 GRIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQ 963 (1139)
Q Consensus 884 g~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~ 963 (1139)
|.|+|+||+++|+.. ..++|+|+||+|++||++||+||||||||||+++|+|+++ .+|+|.|||+++..++...+|++
T Consensus 1 g~i~~~nls~~~~~~-~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~~ 78 (275)
T cd03289 1 GQMTVKDLTAKYTEG-GNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRKA 78 (275)
T ss_pred CeEEEEEEEEEeCCC-CCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhhh
Confidence 579999999999742 3469999999999999999999999999999999999998 78999999999999999999999
Q ss_pred ceEEccccccccccHHHHhccCCCcCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhcCCC
Q 048639 964 IGLVQQEPLLFSCSIRNNICYGNEAASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIARTLLKRP 1043 (1139)
Q Consensus 964 i~~V~Qdp~LF~gTIreNL~~~~~~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalARALlr~p 1043 (1139)
++||||+|.+|++|+++|++++. ..++++++++++.+++.+++.++|++|++.++++|.+||||||||+|||||++++|
T Consensus 79 i~~v~q~~~lf~~tv~~nl~~~~-~~~~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRall~~p 157 (275)
T cd03289 79 FGVIPQKVFIFSGTFRKNLDPYG-KWSDEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSKA 157 (275)
T ss_pred EEEECCCcccchhhHHHHhhhcc-CCCHHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999998653 35788999999999999999999999999999999999999999999999999999
Q ss_pred CEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhcCCEEEEEeCCEEEEecChhHHhhcc
Q 048639 1044 AIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVINSDVIVVMDKGEVVEMGSHSTLVAES 1123 (1139)
Q Consensus 1044 ~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~~DrI~vl~~G~ive~G~~~eLl~~~ 1123 (1139)
+||||||||++||+.+++.+++.|++.+ .+ +|+|+||||++++..||||+||++|+++++|+|++|+++
T Consensus 158 ~illlDEpts~LD~~~~~~l~~~l~~~~---------~~-~tii~isH~~~~i~~~dri~vl~~G~i~~~g~~~~l~~~- 226 (275)
T cd03289 158 KILLLDEPSAHLDPITYQVIRKTLKQAF---------AD-CTVILSEHRIEAMLECQRFLVIEENKVRQYDSIQKLLNE- 226 (275)
T ss_pred CEEEEECccccCCHHHHHHHHHHHHHhc---------CC-CEEEEEECCHHHHHhCCEEEEecCCeEeecCCHHHHhhC-
Confidence 9999999999999999999999999764 33 459999999999999999999999999999999999986
Q ss_pred CChHHHHHHHH
Q 048639 1124 QGVYSRLYQLQ 1134 (1139)
Q Consensus 1124 ~g~f~~l~~~~ 1134 (1139)
.+.|++++...
T Consensus 227 ~~~~~~~~~~~ 237 (275)
T cd03289 227 KSHFKQAISPS 237 (275)
T ss_pred cHHHHHHHhhc
Confidence 68999998654
No 104
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=9.1e-53 Score=419.69 Aligned_cols=218 Identities=30% Similarity=0.555 Sum_probs=191.8
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCC-CCHHHHhcc
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKD-LDLKSLRKN 334 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~-~~~~~~~~~ 334 (1139)
.|+++|++++|++ ..+|+|||++|++||+++|+|||||||||||++|.|+.+|++|+|.+||.++.. .+...+|++
T Consensus 2 mi~i~~l~K~fg~---~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~ 78 (240)
T COG1126 2 MIEIKNLSKSFGD---KEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRK 78 (240)
T ss_pred eEEEEeeeEEeCC---eEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHHh
Confidence 4899999999974 459999999999999999999999999999999999999999999999987743 378889999
Q ss_pred eEEEecCCCCCcc-cHHHHHhcCCCC---CCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHH
Q 048639 335 IGAVSQEPSLFTG-SLMDNIKVGNMD---ADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAI 410 (1139)
Q Consensus 335 i~~v~Q~~~l~~~-ti~~ni~~g~~~---~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal 410 (1139)
+|+|+|+..||+- |+.||+.++.-. .+.++ ....+.+.++++ |+.......+.+|||||||||||||||
T Consensus 79 vGmVFQ~fnLFPHlTvleNv~lap~~v~~~~k~e-----A~~~A~~lL~~V--GL~~ka~~yP~qLSGGQqQRVAIARAL 151 (240)
T COG1126 79 VGMVFQQFNLFPHLTVLENVTLAPVKVKKLSKAE-----AREKALELLEKV--GLADKADAYPAQLSGGQQQRVAIARAL 151 (240)
T ss_pred cCeecccccccccchHHHHHHhhhHHHcCCCHHH-----HHHHHHHHHHHc--CchhhhhhCccccCcHHHHHHHHHHHH
Confidence 9999999999975 999999987421 12222 122234566666 666777788899999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhcc
Q 048639 411 VKNPPILLLDEATSALDSESEKLVQEALERAM-QGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQT 483 (1139)
Q Consensus 411 ~~~~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 483 (1139)
+.+|+++|+|||||||||+....+.+.++++. .|.|.|+|||.+.+++. ||||+.|++|+|+++|+++++..+
T Consensus 152 aM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~~~f~~ 226 (240)
T COG1126 152 AMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPEEFFDN 226 (240)
T ss_pred cCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEEecCHHHHhcC
Confidence 99999999999999999999999999999876 48999999999999988 999999999999999999998764
No 105
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.3e-50 Score=404.37 Aligned_cols=219 Identities=33% Similarity=0.551 Sum_probs=196.3
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccC-CCChHHHhhh
Q 048639 885 RIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIK-EYNLRRLRSQ 963 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~-~~~l~~lR~~ 963 (1139)
-|+++||+.+|. +..||+|||++|++||.++|+||||||||||+++|.++-+|++|+|.|||.++. ..++..+|++
T Consensus 2 mi~i~~l~K~fg---~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~ 78 (240)
T COG1126 2 MIEIKNLSKSFG---DKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRK 78 (240)
T ss_pred eEEEEeeeEEeC---CeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHHh
Confidence 389999999995 346999999999999999999999999999999999999999999999998764 3378899999
Q ss_pred ceEEcccccccc-ccHHHHhccCCC---cCC----HHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHH
Q 048639 964 IGLVQQEPLLFS-CSIRNNICYGNE---AAS----EAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAI 1035 (1139)
Q Consensus 964 i~~V~Qdp~LF~-gTIreNL~~~~~---~~s----d~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlal 1035 (1139)
+|+|+|+..||+ -|+.||+.++-- ..+ ++.-.+.|+++||.|..+..| .+|||||+||+||
T Consensus 79 vGmVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~~~A~~lL~~VGL~~ka~~yP-----------~qLSGGQqQRVAI 147 (240)
T COG1126 79 VGMVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEAREKALELLEKVGLADKADAYP-----------AQLSGGQQQRVAI 147 (240)
T ss_pred cCeecccccccccchHHHHHHhhhHHHcCCCHHHHHHHHHHHHHHcCchhhhhhCc-----------cccCcHHHHHHHH
Confidence 999999999996 599999987621 112 344567789999999888777 4799999999999
Q ss_pred HHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEEEec
Q 048639 1036 ARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVVEMG 1114 (1139)
Q Consensus 1036 ARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ive~G 1114 (1139)
||||..+|+++++|||||||||+.-..|.+.++++. .++.|.|+|||.+...++ ||||+.||+|+|+|.|
T Consensus 148 ARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA---------~eGmTMivVTHEM~FAr~VadrviFmd~G~iie~g 218 (240)
T COG1126 148 ARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLA---------EEGMTMIIVTHEMGFAREVADRVIFMDQGKIIEEG 218 (240)
T ss_pred HHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHH---------HcCCeEEEEechhHHHHHhhheEEEeeCCEEEEec
Confidence 999999999999999999999999999999999886 566779999999999998 9999999999999999
Q ss_pred ChhHHhhccCCh
Q 048639 1115 SHSTLVAESQGV 1126 (1139)
Q Consensus 1115 ~~~eLl~~~~g~ 1126 (1139)
+|+++..+|+..
T Consensus 219 ~p~~~f~~p~~~ 230 (240)
T COG1126 219 PPEEFFDNPKSE 230 (240)
T ss_pred CHHHHhcCCCCH
Confidence 999999887654
No 106
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=100.00 E-value=4.7e-49 Score=437.80 Aligned_cols=198 Identities=26% Similarity=0.407 Sum_probs=163.6
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhc
Q 048639 885 RIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQI 964 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i 964 (1139)
-|.++||+|+|++.+ ..++++||-|.++++||+|||||+|||||++++.+...|..|.|.-.-. -++
T Consensus 389 vi~~~nv~F~y~~~~--~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~p~~G~vs~~~H-----------~~~ 455 (614)
T KOG0927|consen 389 VIMVQNVSFGYSDNP--MIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQPTIGMVSRHSH-----------NKL 455 (614)
T ss_pred eEEEeccccCCCCcc--hhhhhhhcccCcccceeEecCCCCchhhhHHHHhhcccccccccccccc-----------ccc
Confidence 599999999997543 6899999999999999999999999999999999999999999865321 123
Q ss_pred eEEccc---cccccccHHHHhccCCCc-CCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhc
Q 048639 965 GLVQQE---PLLFSCSIRNNICYGNEA-ASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIARTLL 1040 (1139)
Q Consensus 965 ~~V~Qd---p~LF~gTIreNL~~~~~~-~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalARALl 1040 (1139)
++-.|+ ...++-|.-+++.+-.++ -..+++...+.+.||....+.. ++ ++||+|||.||++||.++
T Consensus 456 ~~y~Qh~~e~ldl~~s~le~~~~~~~~~~~~e~~r~ilgrfgLtgd~q~~------p~----~~LS~Gqr~rVlFa~l~~ 525 (614)
T KOG0927|consen 456 PRYNQHLAEQLDLDKSSLEFMMPKFPDEKELEEMRSILGRFGLTGDAQVV------PM----SQLSDGQRRRVLFARLAV 525 (614)
T ss_pred hhhhhhhHhhcCcchhHHHHHHHhccccchHHHHHHHHHHhCCCcccccc------ch----hhcccccchhHHHHHHHh
Confidence 333443 345677888888765453 5667889999999997544333 33 479999999999999999
Q ss_pred CCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEEEe-cChh
Q 048639 1041 KRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVVEM-GSHS 1117 (1139)
Q Consensus 1041 r~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ive~-G~~~ 1117 (1139)
++|.||||||||++||.+|-....++|.++ .++ ||+|+|+...|.. +++|.+.++|.+... |...
T Consensus 526 kqP~lLlLDEPtnhLDi~tid~laeaiNe~-----------~Gg-vv~vSHDfrlI~qVaeEi~~c~~~~~~~~~G~i~ 592 (614)
T KOG0927|consen 526 KQPHLLLLDEPTNHLDIETIDALAEAINEF-----------PGG-VVLVSHDFRLISQVAEEIWVCENGTVTKWDGDIE 592 (614)
T ss_pred cCCcEEEecCCCcCCCchhHHHHHHHHhcc-----------CCc-eeeeechhhHHHHHHHHhHhhccCceeecCccHH
Confidence 999999999999999999999999999864 345 9999999999988 999999999998654 4443
No 107
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.1e-50 Score=418.91 Aligned_cols=222 Identities=35% Similarity=0.559 Sum_probs=195.6
Q ss_pred EEEEeEEEECCCC--CCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCC---hHHH
Q 048639 886 IEFQNIKFNYPSR--PEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYN---LRRL 960 (1139)
Q Consensus 886 I~~~nvsf~Y~~~--~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~---l~~l 960 (1139)
|+|+||++.|+.. +..++|+||||+|++||..||+|+||||||||++++.++-+|++|+|.+||.|+..++ +..+
T Consensus 2 I~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~~ 81 (339)
T COG1135 2 IELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQL 81 (339)
T ss_pred eEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHHH
Confidence 8999999999752 1246999999999999999999999999999999999999999999999998887775 4567
Q ss_pred hhhceEEcccccccc-ccHHHHhccCCC--cCC----HHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHH
Q 048639 961 RSQIGLVQQEPLLFS-CSIRNNICYGNE--AAS----EAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRI 1033 (1139)
Q Consensus 961 R~~i~~V~Qdp~LF~-gTIreNL~~~~~--~~s----d~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl 1033 (1139)
|++||+|+|++.|++ .|+.+|+.|.-. ..+ ++++.+.|+.+||.|+..+-| ++||||||||+
T Consensus 82 R~~IGMIFQhFnLLssrTV~~NvA~PLeiag~~k~ei~~RV~elLelVgL~dk~~~yP-----------~qLSGGQKQRV 150 (339)
T COG1135 82 RQKIGMIFQHFNLLSSRTVFENVAFPLELAGVPKAEIKQRVAELLELVGLSDKADRYP-----------AQLSGGQKQRV 150 (339)
T ss_pred HhhccEEeccccccccchHHhhhhhhHhhcCCCHHHHHHHHHHHHHHcCChhhhccCc-----------hhcCcchhhHH
Confidence 789999999999997 899999998532 222 346778899999988766654 68999999999
Q ss_pred HHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEEE
Q 048639 1034 AIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVVE 1112 (1139)
Q Consensus 1034 alARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ive 1112 (1139)
+|||||..+|+||++|||||+|||+|.+.|.+.|++.. .+-+.|+++|||-++.+++ ||||.||++|+|+|
T Consensus 151 aIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In--------~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE 222 (339)
T COG1135 151 AIARALANNPKILLCDEATSALDPETTQSILELLKDIN--------RELGLTIVLITHEMEVVKRICDRVAVLDQGRLVE 222 (339)
T ss_pred HHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHH--------HHcCCEEEEEechHHHHHHHhhhheEeeCCEEEE
Confidence 99999999999999999999999999999999998764 1345679999999999998 99999999999999
Q ss_pred ecChhHHhhccCCh
Q 048639 1113 MGSHSTLVAESQGV 1126 (1139)
Q Consensus 1113 ~G~~~eLl~~~~g~ 1126 (1139)
.|+-.++..+|+..
T Consensus 223 ~G~v~~vF~~Pk~~ 236 (339)
T COG1135 223 EGTVSEVFANPKHA 236 (339)
T ss_pred eccHHHhhcCcchH
Confidence 99999999887543
No 108
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-49 Score=404.45 Aligned_cols=225 Identities=33% Similarity=0.599 Sum_probs=193.5
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcceE
Q 048639 257 IDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNIG 336 (1139)
Q Consensus 257 i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 336 (1139)
|+|+|||++|. ++.+++|+||+|++||+++++|||||||||++|+|.|+++|++|+|++||+++++++..++|++||
T Consensus 2 I~~~nvsk~y~---~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~IG 78 (309)
T COG1125 2 IEFENVSKRYG---NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRKIG 78 (309)
T ss_pred ceeeeeehhcC---CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHhhh
Confidence 78999999997 356999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCcc-cHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhCCCCCC--ccccccCCCCChHHHHHHHHHHHHc
Q 048639 337 AVSQEPSLFTG-SLMDNIKVGNM--DADDEQIYNASMMANAHSFISQLPDQYS--TELGQRGVQLSGGQKQRIAIARAIV 411 (1139)
Q Consensus 337 ~v~Q~~~l~~~-ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~--t~i~~~g~~LSgGqkqRi~lARal~ 411 (1139)
||-|..-||+. ||.|||.+-.. ..+.+++.+ .+++.+..+ |++ ......+.+|||||+|||.+||||.
T Consensus 79 YviQqigLFPh~Tv~eNIa~VP~L~~w~k~~i~~-----r~~ELl~lv--gL~p~~~~~RyP~eLSGGQQQRVGv~RALA 151 (309)
T COG1125 79 YVIQQIGLFPHLTVAENIATVPKLLGWDKERIKK-----RADELLDLV--GLDPSEYADRYPHELSGGQQQRVGVARALA 151 (309)
T ss_pred hhhhhcccCCCccHHHHHHhhhhhcCCCHHHHHH-----HHHHHHHHh--CCCHHHHhhcCchhcCcchhhHHHHHHHHh
Confidence 99999999975 99999987532 122333322 223344433 333 2456778899999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhccc--hH
Q 048639 412 KNPPILLLDEATSALDSESEKLVQEALERAMQ--GRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQTS--DF 486 (1139)
Q Consensus 412 ~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~--~~ 486 (1139)
.+|+|+|+|||++||||.++..+++.++++.+ ++|+|+||||++++-+ +|||.+|++|+|+..++|++++.++ +.
T Consensus 152 adP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~il~~Pan~F 231 (309)
T COG1125 152 ADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEILANPANDF 231 (309)
T ss_pred cCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHHHhCccHHH
Confidence 99999999999999999999999999988764 8999999999999755 9999999999999999999998763 34
Q ss_pred HHHHH
Q 048639 487 YNRLF 491 (1139)
Q Consensus 487 ~~~~~ 491 (1139)
.+.++
T Consensus 232 V~~f~ 236 (309)
T COG1125 232 VEDFF 236 (309)
T ss_pred HHHHh
Confidence 44444
No 109
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.5e-49 Score=443.05 Aligned_cols=227 Identities=32% Similarity=0.487 Sum_probs=198.9
Q ss_pred CccccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccc-----CCccEEEECCcccC--
Q 048639 881 RIKGRIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYD-----PNEGIILIDGKGIK-- 953 (1139)
Q Consensus 881 ~~~g~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~-----p~~G~I~idG~di~-- 953 (1139)
+..+.|+|+|++++|++. ..++|+|+||+|++||++||+||||||||||+++|+|+++ |++|+|.|||+|+.
T Consensus 76 ~~~~~i~~~nls~~y~~~-~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~ 154 (329)
T PRK14257 76 NHANVFEIRNFNFWYMNR-TKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSK 154 (329)
T ss_pred CcCceEEEEeeEEEecCC-CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccc
Confidence 445789999999999642 3469999999999999999999999999999999999997 57999999999997
Q ss_pred CCChHHHhhhceEEccccccccccHHHHhccCCC--cCCHHH-----HHHHHHHcCchHHHhhCCCCccccccCCCCCCC
Q 048639 954 EYNLRRLRSQIGLVQQEPLLFSCSIRNNICYGNE--AASEAE-----IVEVSKKANIHDFISSLPDGYDTVVGEKGCQLS 1026 (1139)
Q Consensus 954 ~~~l~~lR~~i~~V~Qdp~LF~gTIreNL~~~~~--~~sd~e-----i~~al~~~~l~~~i~~lp~gldt~v~e~G~~LS 1026 (1139)
.+++..+|++++||||+|.+|++|+++||+++.. ..++++ +.++++.++++ +++++.+++.|.+||
T Consensus 155 ~~~~~~lr~~i~~v~q~~~~~~~ti~eNi~~~~~~~~~~~~~~~~~~~~~~l~~~~L~-------~~l~~~~~~~~~~LS 227 (329)
T PRK14257 155 KISSLELRTRIGMVFQKPTPFEMSIFDNVAYGPRNNGINDRKILEKIVEKSLKSAALW-------DEVKDDLDKAGNALS 227 (329)
T ss_pred ccchHhhhccEEEEecCCccCCCcHHHHHHhHHHhcCCChHHHHHHHHHHHHHHcCCc-------chhhhhhhCCcccCC
Confidence 4566788999999999999999999999996521 234444 45566777764 345678899999999
Q ss_pred hHHHHHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEE
Q 048639 1027 GGQKQRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVM 1105 (1139)
Q Consensus 1027 gGQrQrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl 1105 (1139)
||||||+|||||++++|+|||||||||+||+++.+.+++.|++.+ ++ +|+|+|||+++++.+ ||||+||
T Consensus 228 gGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~---------~~-~Tii~iTH~l~~i~~~~Driivl 297 (329)
T PRK14257 228 GGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELK---------KK-YSIIIVTHSMAQAQRISDETVFF 297 (329)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHh---------cC-CEEEEEeCCHHHHHHhCCEEEEE
Confidence 999999999999999999999999999999999999999999875 44 459999999999998 9999999
Q ss_pred eCCEEEEecChhHHhhccCC
Q 048639 1106 DKGEVVEMGSHSTLVAESQG 1125 (1139)
Q Consensus 1106 ~~G~ive~G~~~eLl~~~~g 1125 (1139)
++|+|+|.|+|+++..++..
T Consensus 298 ~~G~i~e~g~~~~l~~~~~~ 317 (329)
T PRK14257 298 YQGWIEEAGETKTIFIHPKN 317 (329)
T ss_pred ECCEEEEeCCHHHHhcCCCc
Confidence 99999999999999876543
No 110
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3e-49 Score=414.64 Aligned_cols=221 Identities=33% Similarity=0.544 Sum_probs=190.7
Q ss_pred EEEEeEEEECCCC--CCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCH---HHH
Q 048639 257 IDIRDVCFAYPSR--PDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDL---KSL 331 (1139)
Q Consensus 257 i~~~~v~~~y~~~--~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~---~~~ 331 (1139)
|++++||+.|+.. ....+|+||||+|++||+.+|||+||+|||||++++.++-.|++|+|.+||.|+..++. ..+
T Consensus 2 I~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~~ 81 (339)
T COG1135 2 IELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQL 81 (339)
T ss_pred eEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHHH
Confidence 7899999999853 12469999999999999999999999999999999999999999999999998877764 556
Q ss_pred hcceEEEecCCCCCc-ccHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHH
Q 048639 332 RKNIGAVSQEPSLFT-GSLMDNIKVGNMD--ADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIAR 408 (1139)
Q Consensus 332 ~~~i~~v~Q~~~l~~-~ti~~ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lAR 408 (1139)
|++||++||++.|++ .||++|+.|...- .+.+++.+ ...+.++-+ |+....+..+.+|||||||||+|||
T Consensus 82 R~~IGMIFQhFnLLssrTV~~NvA~PLeiag~~k~ei~~-----RV~elLelV--gL~dk~~~yP~qLSGGQKQRVaIAR 154 (339)
T COG1135 82 RQKIGMIFQHFNLLSSRTVFENVAFPLELAGVPKAEIKQ-----RVAELLELV--GLSDKADRYPAQLSGGQKQRVAIAR 154 (339)
T ss_pred HhhccEEeccccccccchHHhhhhhhHhhcCCCHHHHHH-----HHHHHHHHc--CChhhhccCchhcCcchhhHHHHHH
Confidence 789999999999997 6999999996532 22333222 222334433 5566677888999999999999999
Q ss_pred HHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhccc
Q 048639 409 AIVKNPPILLLDEATSALDSESEKLVQEALERAMQ--GRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQTS 484 (1139)
Q Consensus 409 al~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~ 484 (1139)
||..+|+|||.|||||||||+|.+.|.+.|++..+ |-|+++|||.++.++. |||+.||++|+++|+|+..++..++
T Consensus 155 ALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~vF~~P 233 (339)
T COG1135 155 ALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSEVFANP 233 (339)
T ss_pred HHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHHhhcCc
Confidence 99999999999999999999999999999988653 8999999999999988 9999999999999999999997654
No 111
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=2.1e-48 Score=428.67 Aligned_cols=236 Identities=29% Similarity=0.508 Sum_probs=219.4
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcce
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNI 335 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 335 (1139)
.|+++|++++|++. +.++|+|+||+|++||+++|+||||||||||+++|+|+++ ++|+|.+||.++..++...+|++|
T Consensus 2 ~i~~~nls~~~~~~-~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~~i 79 (275)
T cd03289 2 QMTVKDLTAKYTEG-GNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRKAF 79 (275)
T ss_pred eEEEEEEEEEeCCC-CCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhhhE
Confidence 58999999999643 3569999999999999999999999999999999999998 799999999999988999999999
Q ss_pred EEEecCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHccCCC
Q 048639 336 GAVSQEPSLFTGSLMDNIKVGNMDADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVKNPP 415 (1139)
Q Consensus 336 ~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~~~~ 415 (1139)
+||||+|++|++|+++|+.... ..++++++++++..++.+++..+|+++++.++++|.+||||||||++||||++++|+
T Consensus 80 ~~v~q~~~lf~~tv~~nl~~~~-~~~~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRall~~p~ 158 (275)
T cd03289 80 GVIPQKVFIFSGTFRKNLDPYG-KWSDEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSKAK 158 (275)
T ss_pred EEECCCcccchhhHHHHhhhcc-CCCHHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999997432 246788999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhccCEEEEEeCcEEEEecChhhhhccchHHHHHHhhc
Q 048639 416 ILLLDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVNADMIAVVEDGQVTETGTHHSLLQTSDFYNRLFTMQ 494 (1139)
Q Consensus 416 illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~ 494 (1139)
|+||||||++||+.+...+.+.|++..+++|+|+||||++.+..||||++|++|++++.|+++++++..+.|++++...
T Consensus 159 illlDEpts~LD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~dri~vl~~G~i~~~g~~~~l~~~~~~~~~~~~~~ 237 (275)
T cd03289 159 ILLLDEPSAHLDPITYQVIRKTLKQAFADCTVILSEHRIEAMLECQRFLVIEENKVRQYDSIQKLLNEKSHFKQAISPS 237 (275)
T ss_pred EEEEECccccCCHHHHHHHHHHHHHhcCCCEEEEEECCHHHHHhCCEEEEecCCeEeecCCHHHHhhCcHHHHHHHhhc
Confidence 9999999999999999999999998777899999999999998899999999999999999999999888888887543
No 112
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.5e-49 Score=390.54 Aligned_cols=219 Identities=34% Similarity=0.539 Sum_probs=196.2
Q ss_pred ccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCc-----cEEEECCccCCC--CC
Q 048639 255 GNIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSN-----GDILIDSLNIKD--LD 327 (1139)
Q Consensus 255 ~~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~-----G~i~~~g~~~~~--~~ 327 (1139)
..++++|+++.|++ +.+|+|||++|++++++|++|||||||||||+++.++.+..+ |+|.++|+|+.+ .+
T Consensus 6 ~~~~~~~l~~yYg~---~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d 82 (253)
T COG1117 6 PAIEVRDLNLYYGD---KHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVD 82 (253)
T ss_pred ceeEecceeEEECc---hhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCC
Confidence 35899999999973 459999999999999999999999999999999999998875 999999999965 57
Q ss_pred HHHHhcceEEEecCCCCCcccHHHHHhcCCCC------CCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHH
Q 048639 328 LKSLRKNIGAVSQEPSLFTGSLMDNIKVGNMD------ADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQK 401 (1139)
Q Consensus 328 ~~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~------~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqk 401 (1139)
...+|++||+|+|.|.-|+.||+||+.||..- .-++.+.++++.+.+++.++. .+.+.+..|||||+
T Consensus 83 ~~~lRr~vGMVFQkPnPFp~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVKD-------rL~~sa~~LSGGQQ 155 (253)
T COG1117 83 VVELRRRVGMVFQKPNPFPMSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVKD-------RLHKSALGLSGGQQ 155 (253)
T ss_pred HHHHHHHheeeccCCCCCCchHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhHH-------HhhCCccCCChhHH
Confidence 88999999999999999999999999998431 124556777888877765543 34567889999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhh
Q 048639 402 QRIAIARAIVKNPPILLLDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSL 480 (1139)
Q Consensus 402 qRi~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l 480 (1139)
||+||||||.-+|+|||||||||||||.+...|.+.|.+++++-|+|+|||.+..+.+ +|+...+..|+++|.|+.+++
T Consensus 156 QRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~g~T~~i 235 (253)
T COG1117 156 QRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKKKYTIVIVTHNMQQAARVSDYTAFFYLGELVEFGPTDKI 235 (253)
T ss_pred HHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHhccEEEEEeCCHHHHHHHhHhhhhhcccEEEEEcCHHhh
Confidence 9999999999999999999999999999999999999999989999999999999877 999999999999999999988
Q ss_pred hcc
Q 048639 481 LQT 483 (1139)
Q Consensus 481 ~~~ 483 (1139)
..+
T Consensus 236 F~~ 238 (253)
T COG1117 236 FTN 238 (253)
T ss_pred hcC
Confidence 654
No 113
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.8e-48 Score=383.26 Aligned_cols=221 Identities=33% Similarity=0.523 Sum_probs=197.4
Q ss_pred ccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCc-----cEEEECCcccCC--CC
Q 048639 884 GRIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNE-----GIILIDGKGIKE--YN 956 (1139)
Q Consensus 884 g~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~-----G~I~idG~di~~--~~ 956 (1139)
..++++|+++.|. +..+|+|||++|++++.+|++|||||||||+++.|-|+.+... |+|.+||.||.+ ++
T Consensus 6 ~~~~~~~l~~yYg---~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d 82 (253)
T COG1117 6 PAIEVRDLNLYYG---DKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVD 82 (253)
T ss_pred ceeEecceeEEEC---chhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCC
Confidence 3589999999995 3469999999999999999999999999999999999999875 999999999976 57
Q ss_pred hHHHhhhceEEccccccccccHHHHhccCCC------cCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHH
Q 048639 957 LRRLRSQIGLVQQEPLLFSCSIRNNICYGNE------AASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQK 1030 (1139)
Q Consensus 957 l~~lR~~i~~V~Qdp~LF~gTIreNL~~~~~------~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQr 1030 (1139)
.-.||+++|+|+|.|.-|+.||+||+.||.. ..-|+-++++|++|.|||-+.. . +.+.+..|||||+
T Consensus 83 ~~~lRr~vGMVFQkPnPFp~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVKD---r----L~~sa~~LSGGQQ 155 (253)
T COG1117 83 VVELRRRVGMVFQKPNPFPMSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVKD---R----LHKSALGLSGGQQ 155 (253)
T ss_pred HHHHHHHheeeccCCCCCCchHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhHH---H----hhCCccCCChhHH
Confidence 8899999999999999999999999999832 1234568899999999998753 3 3455677999999
Q ss_pred HHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCE
Q 048639 1031 QRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGE 1109 (1139)
Q Consensus 1031 QrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ 1109 (1139)
|||||||||.-+|+||+||||||+|||.+...|.+.|.++. +.-||++|||.+.-..+ +|+...+-.|+
T Consensus 156 QRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk----------~~yTIviVTHnmqQAaRvSD~taFf~~G~ 225 (253)
T COG1117 156 QRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELK----------KKYTIVIVTHNMQQAARVSDYTAFFYLGE 225 (253)
T ss_pred HHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHH----------hccEEEEEeCCHHHHHHHhHhhhhhcccE
Confidence 99999999999999999999999999999999999999774 34469999999998877 99999999999
Q ss_pred EEEecChhHHhhccC
Q 048639 1110 VVEMGSHSTLVAESQ 1124 (1139)
Q Consensus 1110 ive~G~~~eLl~~~~ 1124 (1139)
++|+|+-+++..+|+
T Consensus 226 LvE~g~T~~iF~~P~ 240 (253)
T COG1117 226 LVEFGPTDKIFTNPK 240 (253)
T ss_pred EEEEcCHHhhhcCcc
Confidence 999999999997754
No 114
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.5e-47 Score=388.95 Aligned_cols=222 Identities=31% Similarity=0.548 Sum_probs=197.9
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhce
Q 048639 886 IEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQIG 965 (1139)
Q Consensus 886 I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~ 965 (1139)
|+|+|||++|. +..+++|+||+|++||.+.++|||||||||+++++.|+++|++|+|+|||.||++++...||++||
T Consensus 2 I~~~nvsk~y~---~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~IG 78 (309)
T COG1125 2 IEFENVSKRYG---NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRKIG 78 (309)
T ss_pred ceeeeeehhcC---CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHhhh
Confidence 79999999996 346999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcccccccc-ccHHHHhccC------CCcCCHHHHHHHHHHcCch--HHHhhCCCCccccccCCCCCCChHHHHHHHHH
Q 048639 966 LVQQEPLLFS-CSIRNNICYG------NEAASEAEIVEVSKKANIH--DFISSLPDGYDTVVGEKGCQLSGGQKQRIAIA 1036 (1139)
Q Consensus 966 ~V~Qdp~LF~-gTIreNL~~~------~~~~sd~ei~~al~~~~l~--~~i~~lp~gldt~v~e~G~~LSgGQrQrlalA 1036 (1139)
||-|..-||+ -||.+||..- +...-++++.+.++.++|. +|.++.| ..|||||+||+.+|
T Consensus 79 YviQqigLFPh~Tv~eNIa~VP~L~~w~k~~i~~r~~ELl~lvgL~p~~~~~RyP-----------~eLSGGQQQRVGv~ 147 (309)
T COG1125 79 YVIQQIGLFPHLTVAENIATVPKLLGWDKERIKKRADELLDLVGLDPSEYADRYP-----------HELSGGQQQRVGVA 147 (309)
T ss_pred hhhhhcccCCCccHHHHHHhhhhhcCCCHHHHHHHHHHHHHHhCCCHHHHhhcCc-----------hhcCcchhhHHHHH
Confidence 9999999995 6999999753 1122345678889999996 4777766 47999999999999
Q ss_pred HHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEEEecC
Q 048639 1037 RTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVVEMGS 1115 (1139)
Q Consensus 1037 RALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~ 1115 (1139)
|||..+|+||+||||.+||||-++..+|+-+.+... +-++|+|+|||+++.... +|||+||++|+|+.+|+
T Consensus 148 RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~--------~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~ 219 (309)
T COG1125 148 RALAADPPILLMDEPFGALDPITRKQLQEEIKELQK--------ELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDT 219 (309)
T ss_pred HHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHH--------HhCCEEEEEecCHHHHHhhhceEEEecCCeEEEeCC
Confidence 999999999999999999999999999999887641 224569999999998765 99999999999999999
Q ss_pred hhHHhhccCChHHH
Q 048639 1116 HSTLVAESQGVYSR 1129 (1139)
Q Consensus 1116 ~~eLl~~~~g~f~~ 1129 (1139)
|++++++|...|-+
T Consensus 220 P~~il~~Pan~FV~ 233 (309)
T COG1125 220 PDEILANPANDFVE 233 (309)
T ss_pred HHHHHhCccHHHHH
Confidence 99999988766643
No 115
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-46 Score=425.60 Aligned_cols=227 Identities=31% Similarity=0.508 Sum_probs=193.8
Q ss_pred CccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccC-----CCccEEEECCccCCC--C
Q 048639 254 DGNIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYD-----PSNGDILIDSLNIKD--L 326 (1139)
Q Consensus 254 ~~~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~-----~~~G~i~~~g~~~~~--~ 326 (1139)
.+.|+++|++++|++. .+++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.+||+++.. .
T Consensus 78 ~~~i~~~nls~~y~~~-~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~~ 156 (329)
T PRK14257 78 ANVFEIRNFNFWYMNR-TKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKKI 156 (329)
T ss_pred CceEEEEeeEEEecCC-CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccc
Confidence 4579999999999642 3569999999999999999999999999999999999996 579999999999973 4
Q ss_pred CHHHHhcceEEEecCCCCCcccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHH
Q 048639 327 DLKSLRKNIGAVSQEPSLFTGSLMDNIKVGNM--DADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRI 404 (1139)
Q Consensus 327 ~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi 404 (1139)
+...+|+.++||||+|++|++|++|||.|+.. ..++++.++......++ ...+++++++.+++++.+||||||||+
T Consensus 157 ~~~~lr~~i~~v~q~~~~~~~ti~eNi~~~~~~~~~~~~~~~~~~~~~~l~--~~~L~~~l~~~~~~~~~~LSgGqkqRl 234 (329)
T PRK14257 157 SSLELRTRIGMVFQKPTPFEMSIFDNVAYGPRNNGINDRKILEKIVEKSLK--SAALWDEVKDDLDKAGNALSGGQQQRL 234 (329)
T ss_pred chHhhhccEEEEecCCccCCCcHHHHHHhHHHhcCCChHHHHHHHHHHHHH--HcCCcchhhhhhhCCcccCCHHHHHHH
Confidence 55678899999999999999999999998642 12333332222111111 112445567889999999999999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhcc
Q 048639 405 AIARAIVKNPPILLLDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQT 483 (1139)
Q Consensus 405 ~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 483 (1139)
+||||++++|+||||||||++||+++...+.+.|+++.+++|+|+|||+++++.. ||||++|++|+|++.|+++++...
T Consensus 235 ~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~~~Tii~iTH~l~~i~~~~Driivl~~G~i~e~g~~~~l~~~ 314 (329)
T PRK14257 235 CIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKKKYSIIIVTHSMAQAQRISDETVFFYQGWIEEAGETKTIFIH 314 (329)
T ss_pred HHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 9999999999999999999999999999999999988888999999999999987 999999999999999999998754
No 116
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=5.2e-46 Score=409.84 Aligned_cols=241 Identities=32% Similarity=0.578 Sum_probs=221.4
Q ss_pred ccccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHh
Q 048639 882 IKGRIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLR 961 (1139)
Q Consensus 882 ~~g~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR 961 (1139)
..|.|+++|++++|++. +.++|+|+||+|+|||++||+|+||||||||+++|+|+++|++|+|.+||.++.+.+...+|
T Consensus 16 ~~~~i~~~~l~~~~~~~-~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 94 (257)
T cd03288 16 LGGEIKIHDLCVRYENN-LKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTLR 94 (257)
T ss_pred CCceEEEEEEEEEeCCC-CCcceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccCCCCCeEEECCEEhhhCCHHHHh
Confidence 46789999999999742 24699999999999999999999999999999999999999999999999999998888999
Q ss_pred hhceEEccccccccccHHHHhccCCCcCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhcC
Q 048639 962 SQIGLVQQEPLLFSCSIRNNICYGNEAASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIARTLLK 1041 (1139)
Q Consensus 962 ~~i~~V~Qdp~LF~gTIreNL~~~~~~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalARALlr 1041 (1139)
++++|++|+|.+|++|+++|+.+.. ...+++++++++.+++.+++..+|.|+++.+++.+.+||+|||||++|||||++
T Consensus 95 ~~i~~v~q~~~l~~~tv~~nl~~~~-~~~~~~~~~~l~~~~l~~~~~~~~~~l~~~~~~~~~~LS~G~~qrl~laral~~ 173 (257)
T cd03288 95 SRLSIILQDPILFSGSIRFNLDPEC-KCTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARAFVR 173 (257)
T ss_pred hhEEEECCCCcccccHHHHhcCcCC-CCCHHHHHHHHHHhCcHHHHhhcccccCcEeccCCCcCCHHHHHHHHHHHHHhc
Confidence 9999999999999999999998653 234667889999999999999999999999999999999999999999999999
Q ss_pred CCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhcCCEEEEEeCCEEEEecChhHHhh
Q 048639 1042 RPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVINSDVIVVMDKGEVVEMGSHSTLVA 1121 (1139)
Q Consensus 1042 ~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~~DrI~vl~~G~ive~G~~~eLl~ 1121 (1139)
+|++|||||||++||+++.+.+.+.+++.. . ++|+|++||+++.+..||||++|++|++++.|+++++.+
T Consensus 174 ~p~llllDEPt~gLD~~~~~~l~~~l~~~~---------~-~~tiii~sh~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 243 (257)
T cd03288 174 KSSILIMDEATASIDMATENILQKVVMTAF---------A-DRTVVTIAHRVSTILDADLVLVLSRGILVECDTPENLLA 243 (257)
T ss_pred CCCEEEEeCCccCCCHHHHHHHHHHHHHhc---------C-CCEEEEEecChHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 999999999999999999999999998753 3 346999999999999999999999999999999999998
Q ss_pred ccCChHHHHHHHH
Q 048639 1122 ESQGVYSRLYQLQ 1134 (1139)
Q Consensus 1122 ~~~g~f~~l~~~~ 1134 (1139)
..++.|++++..+
T Consensus 244 ~~~~~~~~~~~~~ 256 (257)
T cd03288 244 QEDGVFASLVRTD 256 (257)
T ss_pred ccchHHHHHHhcc
Confidence 7778899988654
No 117
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=4.8e-45 Score=444.62 Aligned_cols=199 Identities=28% Similarity=0.430 Sum_probs=167.6
Q ss_pred cccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccC--CccEEEECCcccCCCChHHHhhhceEEcccc-cccccc
Q 048639 901 VTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDP--NEGIILIDGKGIKEYNLRRLRSQIGLVQQEP-LLFSCS 977 (1139)
Q Consensus 901 ~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p--~~G~I~idG~di~~~~l~~lR~~i~~V~Qdp-~LF~gT 977 (1139)
+..|+|||=-++||.-.|++|+||||||||++.|.+=..- -+|+|+|||.+..+ +..++.+|||.|++ |+=.-|
T Consensus 804 ~qLL~~V~G~~kPG~LTALMG~SGAGKTTLLdvLA~R~t~G~I~Gdi~i~G~p~~q---~tF~R~~GYvqQ~DiH~~~~T 880 (1391)
T KOG0065|consen 804 RQLLNNVSGAFKPGVLTALMGESGAGKTTLLDVLAGRKTGGYIEGDILISGFPKDQ---ETFARVSGYVEQQDIHSPELT 880 (1391)
T ss_pred eEhhhcCceEecCCceeehhcCCCCchHHHHHHHhcCcccceEEeEEEECCeeCch---hhhccccceeecccccCcccc
Confidence 4689999999999999999999999999999999987542 37999999998765 78999999999977 666779
Q ss_pred HHHHhccCC----C-cCCHH----HHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhcCCC-CEEE
Q 048639 978 IRNNICYGN----E-AASEA----EIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIARTLLKRP-AIML 1047 (1139)
Q Consensus 978 IreNL~~~~----~-~~sd~----ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalARALlr~p-~ILl 1047 (1139)
|||-|.+.. | +.+++ -+.++.+..+|.++- |..||..|+.||..||.|+.||--|+.|| .||.
T Consensus 881 VrESL~fSA~LRlp~~v~~~ek~~yVe~Vi~lleL~~~~-------daiVG~~G~GLs~eQRKrLTIgVELvA~P~~ilF 953 (1391)
T KOG0065|consen 881 VRESLRFSAALRLPKEVSDEEKYEYVEEVIELLELKEYA-------DALVGLPGSGLSTEQRKRLTIGVELVANPSSILF 953 (1391)
T ss_pred hHHHHHHHHHHcCCCcCCHHHHHHHHHHHHHHhCchhhh-------hhhccCCCCCCCHHHhceeeEEEEEecCCceeEE
Confidence 999997642 1 23333 367778888887664 45688888999999999999999999999 9999
Q ss_pred eeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhh--hcCCEEEEEe-CCEEEEecChhH
Q 048639 1048 LDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATV--INSDVIVVMD-KGEVVEMGSHST 1118 (1139)
Q Consensus 1048 LDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti--~~~DrI~vl~-~G~ive~G~~~e 1118 (1139)
||||||+||+++...|.+.+|+.. ..+.||++.-|.++.. +..|+++.|+ +|+.|-+|+.-+
T Consensus 954 LDEPTSGLDsqaA~~i~~~lrkla---------~tGqtIlCTIHQPS~~ife~FD~LLLLkrGGqtVY~G~lG~ 1018 (1391)
T KOG0065|consen 954 LDEPTSGLDSQAAAIVMRFLRKLA---------DTGQTILCTIHQPSIDIFEAFDELLLLKRGGQTVYFGPLGE 1018 (1391)
T ss_pred ecCCCCCccHHHHHHHHHHHHHHH---------hcCCeEEEEecCCcHHHHHHHhHHHHHhcCCeEEEecCccc
Confidence 999999999999999999999886 3334599999999864 4599999997 588999887544
No 118
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=7.4e-46 Score=404.75 Aligned_cols=235 Identities=50% Similarity=0.818 Sum_probs=215.5
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhce
Q 048639 886 IEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQIG 965 (1139)
Q Consensus 886 I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~ 965 (1139)
|+++||+++|+++ ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (237)
T cd03252 1 ITFEHVRFRYKPD-GPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQVG 79 (237)
T ss_pred CEEEEEEEecCCC-CccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcEE
Confidence 5789999999642 346999999999999999999999999999999999999999999999999998888888899999
Q ss_pred EEccccccccccHHHHhccCCCcCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhcCCCCE
Q 048639 966 LVQQEPLLFSCSIRNNICYGNEAASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIARTLLKRPAI 1045 (1139)
Q Consensus 966 ~V~Qdp~LF~gTIreNL~~~~~~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalARALlr~p~I 1045 (1139)
|+||++.+|+.|+++||.++.+..+.+++.++++..++.+++..+|.|+++.....+.+||||||||++|||||+++|++
T Consensus 80 ~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~l 159 (237)
T cd03252 80 VVLQENVLFNRSIRDNIALADPGMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARALIHNPRI 159 (237)
T ss_pred EEcCCchhccchHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHHhhCCCE
Confidence 99999999999999999986544556778888888999999999999999999888999999999999999999999999
Q ss_pred EEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhcCCEEEEEeCCEEEEecChhHHhhccCC
Q 048639 1046 MLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVINSDVIVVMDKGEVVEMGSHSTLVAESQG 1125 (1139)
Q Consensus 1046 LlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~~DrI~vl~~G~ive~G~~~eLl~~~~g 1125 (1139)
|||||||++||+.+.+.+.+.|++.. . ++|+|++||+++.+..||+|++|++|++++.|++++++++ .+
T Consensus 160 lllDEP~~~LD~~~~~~l~~~l~~~~---------~-~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~-~~ 228 (237)
T cd03252 160 LIFDEATSALDYESEHAIMRNMHDIC---------A-GRTVIIIAHRLSTVKNADRIIVMEKGRIVEQGSHDELLAE-NG 228 (237)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHhc---------C-CCEEEEEeCCHHHHHhCCEEEEEECCEEEEEcCHHHHHhc-cC
Confidence 99999999999999999999999764 3 3569999999999988999999999999999999999976 78
Q ss_pred hHHHHHH
Q 048639 1126 VYSRLYQ 1132 (1139)
Q Consensus 1126 ~f~~l~~ 1132 (1139)
.|..+++
T Consensus 229 ~~~~~~~ 235 (237)
T cd03252 229 LYAYLYQ 235 (237)
T ss_pred hHHHHHh
Confidence 8888765
No 119
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=1e-45 Score=403.63 Aligned_cols=234 Identities=46% Similarity=0.743 Sum_probs=213.1
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcceE
Q 048639 257 IDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNIG 336 (1139)
Q Consensus 257 i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 336 (1139)
|+++|++++|++. .+++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (237)
T cd03252 1 ITFEHVRFRYKPD-GPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQVG 79 (237)
T ss_pred CEEEEEEEecCCC-CccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcEE
Confidence 4789999999642 356999999999999999999999999999999999999999999999999988777777888999
Q ss_pred EEecCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHccCCCE
Q 048639 337 AVSQEPSLFTGSLMDNIKVGNMDADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVKNPPI 416 (1139)
Q Consensus 337 ~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~~~~i 416 (1139)
|++|++++|+.|++||+.++.+....+++.+++...++.+.++.+|.|+++..+..+.+||||||||++|||||+.+|++
T Consensus 80 ~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~l 159 (237)
T cd03252 80 VVLQENVLFNRSIRDNIALADPGMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARALIHNPRI 159 (237)
T ss_pred EEcCCchhccchHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHHhhCCCE
Confidence 99999999999999999987654455666677777778888999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhccCEEEEEeCcEEEEecChhhhhccchHHHHHH
Q 048639 417 LLLDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVNADMIAVVEDGQVTETGTHHSLLQTSDFYNRLF 491 (1139)
Q Consensus 417 lllDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~ 491 (1139)
+||||||++||+.+...+.+.|+++.+++|+|++||+++.+..||++++|++|++++.|+++++....+.|+.++
T Consensus 160 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~~~~~~~~ 234 (237)
T cd03252 160 LIFDEATSALDYESEHAIMRNMHDICAGRTVIIIAHRLSTVKNADRIIVMEKGRIVEQGSHDELLAENGLYAYLY 234 (237)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEEcCHHHHHhccChHHHHH
Confidence 999999999999999999999998877899999999999997799999999999999999999988777776654
No 120
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=1.6e-46 Score=397.38 Aligned_cols=222 Identities=31% Similarity=0.541 Sum_probs=191.2
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcce
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNI 335 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 335 (1139)
.++++|++|+|+ ++++|+|+||++++||+++|+||||||||||+|+|+|+++|.+|+|.+||+++.+++.+++.+++
T Consensus 2 ~L~~~~ls~~y~---~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~i 78 (258)
T COG1120 2 MLEVENLSFGYG---GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKKL 78 (258)
T ss_pred eeEEEEEEEEEC---CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhhE
Confidence 478999999997 35699999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCC-CcccHHHHHhcCCCCC-------C--H-HHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHH
Q 048639 336 GAVSQEPSL-FTGSLMDNIKVGNMDA-------D--D-EQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRI 404 (1139)
Q Consensus 336 ~~v~Q~~~l-~~~ti~~ni~~g~~~~-------~--~-~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi 404 (1139)
|||||++.. +.-||+|-+.+|+... + | +.+.++++..++.++ ..+...+||||||||+
T Consensus 79 a~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~l-----------a~r~~~~LSGGerQrv 147 (258)
T COG1120 79 AYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHL-----------ADRPVDELSGGERQRV 147 (258)
T ss_pred EEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHH-----------hcCcccccChhHHHHH
Confidence 999999754 5669999999995421 1 2 234445555544433 3445668999999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCCeEEEEecCccchh-ccCEEEEEeCcEEEEecChhhhh
Q 048639 405 AIARAIVKNPPILLLDEATSALDSESEKLVQEALERAM--QGRTVILIAHRMSTIV-NADMIAVVEDGQVTETGTHHSLL 481 (1139)
Q Consensus 405 ~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~ 481 (1139)
.|||||+++|+||+||||||+||...+..+++.++++. +|+|+|+|.||++.+. .||++++|++|+++.+|++++++
T Consensus 148 ~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G~p~evl 227 (258)
T COG1120 148 LIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIVAQGTPEEVL 227 (258)
T ss_pred HHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEeecCcchhc
Confidence 99999999999999999999999999999999999876 3799999999999875 49999999999999999999987
Q ss_pred ccchHHHHHHh
Q 048639 482 QTSDFYNRLFT 492 (1139)
Q Consensus 482 ~~~~~~~~~~~ 492 (1139)
.. +..++.|.
T Consensus 228 T~-e~l~~Vyg 237 (258)
T COG1120 228 TE-ENLREVYG 237 (258)
T ss_pred CH-HHHHHHhC
Confidence 53 44444443
No 121
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=3.3e-46 Score=378.64 Aligned_cols=228 Identities=32% Similarity=0.573 Sum_probs=192.2
Q ss_pred ccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHH---HH
Q 048639 255 GNIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLK---SL 331 (1139)
Q Consensus 255 ~~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~---~~ 331 (1139)
..|++++|+++|++ +.+++||||+|++||+++|+||||||||||+++|.|+++|++|+|.++|+++.+++.+ .+
T Consensus 7 ~~I~vr~v~~~fG~---~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~i 83 (263)
T COG1127 7 PLIEVRGVTKSFGD---RVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYEI 83 (263)
T ss_pred ceEEEeeeeeecCC---EEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHHH
Confidence 46999999999974 4699999999999999999999999999999999999999999999999999888754 56
Q ss_pred hcceEEEecCCCCCcc-cHHHHHhcCCCC---CCHHHHHHHHHHhcHHHHHHhCCCCCCcc-ccccCCCCChHHHHHHHH
Q 048639 332 RKNIGAVSQEPSLFTG-SLMDNIKVGNMD---ADDEQIYNASMMANAHSFISQLPDQYSTE-LGQRGVQLSGGQKQRIAI 406 (1139)
Q Consensus 332 ~~~i~~v~Q~~~l~~~-ti~~ni~~g~~~---~~~~~~~~~~~~~~~~~~i~~l~~g~~t~-i~~~g~~LSgGqkqRi~l 406 (1139)
|+++|+++|+-.||+. ||+||+.|...+ .+.+.+.+.+ .. .++.. |+... ....+++||||++.|+||
T Consensus 84 r~r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~lv-~~----KL~~V--GL~~~~~~~~PsELSGGM~KRvaL 156 (263)
T COG1127 84 RKRMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLIRELV-LM----KLELV--GLRGAAADLYPSELSGGMRKRVAL 156 (263)
T ss_pred HhheeEEeeccccccccchhHhhheehHhhccCCHHHHHHHH-HH----HHHhc--CCChhhhhhCchhhcchHHHHHHH
Confidence 8999999999999976 999999985332 2233332221 11 12222 34333 334577999999999999
Q ss_pred HHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhcc
Q 048639 407 ARAIVKNPPILLLDEATSALDSESEKLVQEALERAMQ--GRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQT 483 (1139)
Q Consensus 407 ARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 483 (1139)
|||+..||+|+++|||||+|||.+...+.+.|+++.+ +.|+|+||||++++.. |||++++.+|+|+..|+++|+.+.
T Consensus 157 ARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~~Gt~~el~~s 236 (263)
T COG1127 157 ARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVIAEGTPEELLAS 236 (263)
T ss_pred HHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEEEeCCHHHHHhC
Confidence 9999999999999999999999999999999988765 8999999999999977 999999999999999999999876
Q ss_pred c-hHHHHHHh
Q 048639 484 S-DFYNRLFT 492 (1139)
Q Consensus 484 ~-~~~~~~~~ 492 (1139)
+ .+.++++.
T Consensus 237 d~P~v~qf~~ 246 (263)
T COG1127 237 DDPWVRQFFN 246 (263)
T ss_pred CCHHHHHHhc
Confidence 4 45555554
No 122
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-46 Score=380.01 Aligned_cols=231 Identities=32% Similarity=0.550 Sum_probs=194.1
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCC---HHHHh
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLD---LKSLR 332 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~---~~~~~ 332 (1139)
.|+++||++.||+ ++.+|+||||+|++||+++|+||||||||||+++|.|+.+|++|+|.++|.++..+. .+.+|
T Consensus 3 ~i~~~nl~k~yp~--~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~~r 80 (258)
T COG3638 3 MIEVKNLSKTYPG--GHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRKLR 80 (258)
T ss_pred eEEEeeeeeecCC--CceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHHHHH
Confidence 5899999999985 467999999999999999999999999999999999999999999999999987766 56778
Q ss_pred cceEEEecCCCCCcc-cHHHHHhcCCCCCCH--HH---HHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHH
Q 048639 333 KNIGAVSQEPSLFTG-SLMDNIKVGNMDADD--EQ---IYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAI 406 (1139)
Q Consensus 333 ~~i~~v~Q~~~l~~~-ti~~ni~~g~~~~~~--~~---~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~l 406 (1139)
++|||++|++.|.+. |+.+|++.|...... .. +........+.+.++++ |+....-.+..+|||||+|||+|
T Consensus 81 ~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLerv--gi~~~A~qra~~LSGGQQQRVaI 158 (258)
T COG3638 81 RDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERV--GILDKAYQRASTLSGGQQQRVAI 158 (258)
T ss_pred HhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHc--CcHHHHHHHhccCCcchhHHHHH
Confidence 999999999999876 999999988643210 00 01112223334455665 55555667788999999999999
Q ss_pred HHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhcc
Q 048639 407 ARAIVKNPPILLLDEATSALDSESEKLVQEALERAM--QGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQT 483 (1139)
Q Consensus 407 ARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 483 (1139)
||||+++|+|+|-|||+|+|||.+.+.+++.|++.. .|.|+|+.-|+++.+++ ||||+-|++|+|+.+|+.+|+-
T Consensus 159 ARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~ivfDg~~~el~-- 236 (258)
T COG3638 159 ARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGRIVFDGPASELT-- 236 (258)
T ss_pred HHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCcEEEeCChhhhh--
Confidence 999999999999999999999999999999998864 58999999999999976 9999999999999999999963
Q ss_pred chHHHHHHh
Q 048639 484 SDFYNRLFT 492 (1139)
Q Consensus 484 ~~~~~~~~~ 492 (1139)
......+|.
T Consensus 237 ~~~~~~iYg 245 (258)
T COG3638 237 DEALDEIYG 245 (258)
T ss_pred HHHHHHHhc
Confidence 334444443
No 123
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=3.4e-45 Score=404.94 Aligned_cols=195 Identities=24% Similarity=0.336 Sum_probs=162.0
Q ss_pred ccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhh
Q 048639 884 GRIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQ 963 (1139)
Q Consensus 884 g~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~ 963 (1139)
..+++.+|+|.|+..+. +.+.++++++..-+++++||++|+||||+++++.+-..|..|.+.+.+ |.+
T Consensus 361 p~l~i~~V~f~y~p~~y-~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~~~rgi~~~~~-----------r~r 428 (582)
T KOG0062|consen 361 PNLRISYVAFEYTPSEY-QWRKQLGLDRESDSRISRVGENGDGKSTLLKILKGDLTPTRGIVGRHP-----------RLR 428 (582)
T ss_pred CeeEEEeeeccCCCcch-hhhhccCCccchhhhhheeccCchhHHHHHHHHhccCCcccceeeecc-----------cce
Confidence 46999999999964322 799999999999999999999999999999999999999999998865 678
Q ss_pred ceEEccccccc-cccHH--HHhccCCCcCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhc
Q 048639 964 IGLVQQEPLLF-SCSIR--NNICYGNEAASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIARTLL 1040 (1139)
Q Consensus 964 i~~V~Qdp~LF-~gTIr--eNL~~~~~~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalARALl 1040 (1139)
|+|-.|.-+=| +-.+- +-+.--.|..+++|+++.|...|+..-+...+ -..||||||-|+++|-...
T Consensus 429 i~~f~Qhhvd~l~~~v~~vd~~~~~~pG~~~ee~r~hl~~~Gl~g~la~~s----------i~~LSGGQKsrvafA~~~~ 498 (582)
T KOG0062|consen 429 IKYFAQHHVDFLDKNVNAVDFMEKSFPGKTEEEIRRHLGSFGLSGELALQS----------IASLSGGQKSRVAFAACTW 498 (582)
T ss_pred ecchhHhhhhHHHHHhHHHHHHHHhCCCCCHHHHHHHHHhcCCCchhhhcc----------ccccCCcchhHHHHHHHhc
Confidence 99999976533 11111 11110124458999999999998876554322 2469999999999999999
Q ss_pred CCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEEE
Q 048639 1041 KRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVVE 1112 (1139)
Q Consensus 1041 r~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ive 1112 (1139)
.+|.+|||||||.+||.++-..+-++|+.. ++. ||+|||+.+.+.. |+.++|.++|+|.-
T Consensus 499 ~~PhlLVLDEPTNhLD~dsl~AL~~Al~~F-----------~GG-Vv~VSHd~~fi~~~c~E~Wvve~g~vt~ 559 (582)
T KOG0062|consen 499 NNPHLLVLDEPTNHLDRDSLGALAKALKNF-----------NGG-VVLVSHDEEFISSLCKELWVVEDGKVTP 559 (582)
T ss_pred CCCcEEEecCCCccccHHHHHHHHHHHHhc-----------CCc-EEEEECcHHHHhhcCceeEEEcCCcEEe
Confidence 999999999999999999999999999863 455 9999999999987 99999999999976
No 124
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.4e-46 Score=383.02 Aligned_cols=202 Identities=32% Similarity=0.531 Sum_probs=171.9
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcce
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNI 335 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 335 (1139)
.+++++++++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+.+|++|+|.++|.++..- ...+
T Consensus 3 ~l~i~~v~~~f~~---~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p-----~~~~ 74 (248)
T COG1116 3 LLEIEGVSKSFGG---VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGP-----GPDI 74 (248)
T ss_pred eEEEEeeEEEeCc---eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCC-----CCCE
Confidence 4889999999974 5699999999999999999999999999999999999999999999999887433 3579
Q ss_pred EEEecCCCCCcc-cHHHHHhcCCCCC--CHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHcc
Q 048639 336 GAVSQEPSLFTG-SLMDNIKVGNMDA--DDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVK 412 (1139)
Q Consensus 336 ~~v~Q~~~l~~~-ti~~ni~~g~~~~--~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~ 412 (1139)
+||+|++.||+- ||+||+.++.... ..++ ..+.+.+.++.. |+...-+..+.+||||||||+||||||+.
T Consensus 75 ~~vFQ~~~LlPW~Tv~~NV~l~l~~~~~~~~e-----~~~~a~~~L~~V--gL~~~~~~~P~qLSGGMrQRVaiARAL~~ 147 (248)
T COG1116 75 GYVFQEDALLPWLTVLDNVALGLELRGKSKAE-----ARERAKELLELV--GLAGFEDKYPHQLSGGMRQRVAIARALAT 147 (248)
T ss_pred EEEeccCcccchhhHHhhheehhhccccchHh-----HHHHHHHHHHHc--CCcchhhcCccccChHHHHHHHHHHHHhc
Confidence 999999999986 9999999986532 1111 111333455555 55555667788999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCCeEEEEecCccchhc-cCEEEEEeC--cEEE
Q 048639 413 NPPILLLDEATSALDSESEKLVQEALERAM--QGRTVILIAHRMSTIVN-ADMIAVVED--GQVT 472 (1139)
Q Consensus 413 ~~~illlDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~~~~~~~-~d~i~~l~~--G~i~ 472 (1139)
+|+||+||||++|||+.|+..+++.+.++. .++|+++|||+++++-. +|||++|.+ |+|.
T Consensus 148 ~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~P~~i~ 212 (248)
T COG1116 148 RPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNRPGRIG 212 (248)
T ss_pred CCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCCCccee
Confidence 999999999999999999999999998865 37999999999999865 999999998 4453
No 125
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=2.4e-45 Score=380.85 Aligned_cols=209 Identities=34% Similarity=0.551 Sum_probs=173.2
Q ss_pred EEEEeEEEECCCCC-CCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHH---H-
Q 048639 257 IDIRDVCFAYPSRP-DQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKS---L- 331 (1139)
Q Consensus 257 i~~~~v~~~y~~~~-~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~---~- 331 (1139)
++++|+++.|.... ...+|+++||+|++||+++|+|||||||||||++|.|+..|++|.|.++|.|+..++.+. +
T Consensus 2 i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~R 81 (226)
T COG1136 2 IELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKLR 81 (226)
T ss_pred cEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHHH
Confidence 57899999996432 246999999999999999999999999999999999999999999999999999887543 3
Q ss_pred hcceEEEecCCCCCcc-cHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhCCCCCCcccc-ccCCCCChHHHHHHHHH
Q 048639 332 RKNIGAVSQEPSLFTG-SLMDNIKVGNM--DADDEQIYNASMMANAHSFISQLPDQYSTELG-QRGVQLSGGQKQRIAIA 407 (1139)
Q Consensus 332 ~~~i~~v~Q~~~l~~~-ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~-~~g~~LSgGqkqRi~lA 407 (1139)
|++||||+|+..|++. |++|||.+... .....+. ...+.+.++.+ |+..... ..+.+||||||||||||
T Consensus 82 ~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~~~-----~~~~~~l~~~l--gl~~~~~~~~p~eLSGGqqQRVAIA 154 (226)
T COG1136 82 RKKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAGRR-----KRAAEELLEVL--GLEDRLLKKKPSELSGGQQQRVAIA 154 (226)
T ss_pred HHhEEEECccCCCCCCCCHHHHHHhHHHHcCCChhHH-----HHHHHHHHHhc--CChhhhccCCchhcCHHHHHHHHHH
Confidence 4679999999999875 99999996311 1111111 11122333443 4443333 66889999999999999
Q ss_pred HHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCCeEEEEecCccchhccCEEEEEeCcEEE
Q 048639 408 RAIVKNPPILLLDEATSALDSESEKLVQEALERAM--QGRTVILIAHRMSTIVNADMIAVVEDGQVT 472 (1139)
Q Consensus 408 Ral~~~~~illlDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~~~~~~~~d~i~~l~~G~i~ 472 (1139)
|||+.+|+|++.||||++||.++.+.+++.+.++. .|+|+|+|||+......|||++.|.||++.
T Consensus 155 RAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~~~dr~i~l~dG~~~ 221 (226)
T COG1136 155 RALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAKYADRVIELKDGKIE 221 (226)
T ss_pred HHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHhCCEEEEEeCCeee
Confidence 99999999999999999999999999999999874 388999999999999999999999999954
No 126
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=8.1e-46 Score=360.81 Aligned_cols=207 Identities=31% Similarity=0.497 Sum_probs=182.3
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCH---HHHhc
Q 048639 257 IDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDL---KSLRK 333 (1139)
Q Consensus 257 i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~---~~~~~ 333 (1139)
|+|+||++.|++. +++|+||||+|++||++-|+||||||||||+|+|.+...|+.|+|.++|+|+..+.. .-+|+
T Consensus 2 I~f~~V~k~Y~~g--~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~LRR 79 (223)
T COG2884 2 IRFENVSKAYPGG--REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFLRR 79 (223)
T ss_pred eeehhhhhhcCCC--chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchhhh
Confidence 7899999999864 579999999999999999999999999999999999999999999999999977654 45899
Q ss_pred ceEEEecCCCCCcc-cHHHHHhcCCC------CCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHH
Q 048639 334 NIGAVSQEPSLFTG-SLMDNIKVGNM------DADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAI 406 (1139)
Q Consensus 334 ~i~~v~Q~~~l~~~-ti~~ni~~g~~------~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~l 406 (1139)
+||+|+||..|... ||+||+.|... ..-.+++.++++.+++.+-...+|. .||||||||+||
T Consensus 80 ~IGvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~k~~~lP~-----------~LSGGEQQRvaI 148 (223)
T COG2884 80 QIGVVFQDFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKHKARALPS-----------QLSGGEQQRVAI 148 (223)
T ss_pred eeeeEeeeccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccchhhhcCcc-----------ccCchHHHHHHH
Confidence 99999999988765 99999998642 1123456667777777666666664 899999999999
Q ss_pred HHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCCeEEEEecCccchhc-cCEEEEEeCcEEEEecC
Q 048639 407 ARAIVKNPPILLLDEATSALDSESEKLVQEALERAM-QGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGT 476 (1139)
Q Consensus 407 ARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~ 476 (1139)
|||+..+|++||-||||.+|||.+...|++.+.++. .|.||++.||+.+.+.. --|++.+++|+++....
T Consensus 149 ARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~~ 220 (223)
T COG2884 149 ARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRDES 220 (223)
T ss_pred HHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEeccc
Confidence 999999999999999999999999999999998875 49999999999999987 67999999999986543
No 127
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.6e-45 Score=404.82 Aligned_cols=213 Identities=32% Similarity=0.589 Sum_probs=187.6
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcce
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNI 335 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 335 (1139)
.|+++|++++|++. .+|+|+||+|++||+++|+|||||||||||++|+|+.+|++|+|.++|.++.++++++ ++|
T Consensus 3 ~i~l~~v~K~yg~~---~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~--R~i 77 (338)
T COG3839 3 ELELKNVRKSFGSF---EVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEK--RGI 77 (338)
T ss_pred EEEEeeeEEEcCCc---eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhH--CCE
Confidence 58999999999742 2999999999999999999999999999999999999999999999999999988874 789
Q ss_pred EEEecCCCCCcc-cHHHHHhcCCCCC------CHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHH
Q 048639 336 GAVSQEPSLFTG-SLMDNIKVGNMDA------DDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIAR 408 (1139)
Q Consensus 336 ~~v~Q~~~l~~~-ti~~ni~~g~~~~------~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lAR 408 (1139)
|+|||+..||+. ||+|||.|+.... .++++.++++..++...+++ ++.+|||||||||||||
T Consensus 78 amVFQ~yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~eva~~L~l~~lL~r-----------~P~~LSGGQrQRVAlaR 146 (338)
T COG3839 78 AMVFQNYALYPHMTVYENIAFGLKLRGVPKAEIDKRVKEVAKLLGLEHLLNR-----------KPLQLSGGQRQRVALAR 146 (338)
T ss_pred EEEeCCccccCCCcHHHHhhhhhhhCCCchHHHHHHHHHHHHHcCChhHHhc-----------CcccCChhhHHHHHHHH
Confidence 999999999976 9999999986422 24455555555555555444 45689999999999999
Q ss_pred HHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhccc
Q 048639 409 AIVKNPPILLLDEATSALDSESEKLVQEALERAMQ--GRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQTS 484 (1139)
Q Consensus 409 al~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~ 484 (1139)
||.++|+++|||||+|+||++.+..+...|+++.+ +.|+|+||||..++.. +|||.||++|+|.+.|++.|+..++
T Consensus 147 AlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely~~P 225 (338)
T COG3839 147 ALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELYERP 225 (338)
T ss_pred HHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHhhCc
Confidence 99999999999999999999999999999988754 7899999999988765 9999999999999999999998653
No 128
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.1e-45 Score=373.32 Aligned_cols=228 Identities=34% Similarity=0.520 Sum_probs=189.6
Q ss_pred cEEEEeEEEECCCCCC-cccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCC-hHHHhh
Q 048639 885 RIEFQNIKFNYPSRPE-VTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYN-LRRLRS 962 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~~-~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~-l~~lR~ 962 (1139)
.++++|+++.|+.+.. .++|+||||+|.+||++||||+||||||||.++|.|+.+|++|+|.+||.+..... .+..++
T Consensus 3 ~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~~ 82 (252)
T COG1124 3 LLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFYR 82 (252)
T ss_pred eEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhcc
Confidence 4889999999975421 15999999999999999999999999999999999999999999999997766543 336788
Q ss_pred hceEEccccc--cc-cccHHHHh----ccCCCcCCHHHHHHHHHHcCchH-HHhhCCCCccccccCCCCCCChHHHHHHH
Q 048639 963 QIGLVQQEPL--LF-SCSIRNNI----CYGNEAASEAEIVEVSKKANIHD-FISSLPDGYDTVVGEKGCQLSGGQKQRIA 1034 (1139)
Q Consensus 963 ~i~~V~Qdp~--LF-~gTIreNL----~~~~~~~sd~ei~~al~~~~l~~-~i~~lp~gldt~v~e~G~~LSgGQrQrla 1034 (1139)
.+.+|+|||. |= .-||++-| ....-....++++++++.+||.+ |..+.| ..||||||||||
T Consensus 83 ~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~~~~~~~i~~~L~~VgL~~~~l~R~P-----------~eLSGGQ~QRia 151 (252)
T COG1124 83 PVQMVFQDPYSSLNPRRTVGRILSEPLRPHGLSKSQQRIAELLDQVGLPPSFLDRRP-----------HELSGGQRQRIA 151 (252)
T ss_pred ceeEEecCCccccCcchhHHHHHhhhhccCCccHHHHHHHHHHHHcCCCHHHHhcCc-----------hhcChhHHHHHH
Confidence 8999999995 21 23555444 33211234567999999999975 455555 469999999999
Q ss_pred HHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEEEe
Q 048639 1035 IARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVVEM 1113 (1139)
Q Consensus 1035 lARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ive~ 1113 (1139)
|||||.-+|++||||||||+||.-..+.|++.+.+... ..+.|.|+|||+++.+.. ||||+||++|+++|.
T Consensus 152 IARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~--------~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~ 223 (252)
T COG1124 152 IARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKK--------ERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEI 223 (252)
T ss_pred HHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHH--------hcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEe
Confidence 99999999999999999999999999999999988751 234469999999999998 999999999999999
Q ss_pred cChhHHhhccCChHHHHH
Q 048639 1114 GSHSTLVAESQGVYSRLY 1131 (1139)
Q Consensus 1114 G~~~eLl~~~~g~f~~l~ 1131 (1139)
++-.++...+.-.|.+..
T Consensus 224 ~~~~~l~~~~~h~ytr~L 241 (252)
T COG1124 224 GPTEELLSHPSHPYTREL 241 (252)
T ss_pred echhhhhcCCccHHHHHH
Confidence 999999977666676544
No 129
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-44 Score=394.90 Aligned_cols=235 Identities=51% Similarity=0.863 Sum_probs=216.2
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhce
Q 048639 886 IEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQIG 965 (1139)
Q Consensus 886 I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~ 965 (1139)
|+++|++++|++ ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+.++
T Consensus 1 l~~~~l~~~~~~--~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~i~ 78 (236)
T cd03253 1 IEFENVTFAYDP--GRPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRAIG 78 (236)
T ss_pred CEEEEEEEEeCC--CCceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhhEE
Confidence 478999999963 235999999999999999999999999999999999999999999999999999888888999999
Q ss_pred EEccccccccccHHHHhccCCCcCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhcCCCCE
Q 048639 966 LVQQEPLLFSCSIRNNICYGNEAASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIARTLLKRPAI 1045 (1139)
Q Consensus 966 ~V~Qdp~LF~gTIreNL~~~~~~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalARALlr~p~I 1045 (1139)
|+||+|.+|++|+++|+.++.+..+++++.++++.+++.+++..+|.|+++.+.....+||||||||++|||||+++|++
T Consensus 79 ~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~LS~G~~~rl~la~aL~~~p~l 158 (236)
T cd03253 79 VVPQDTVLFNDTIGYNIRYGRPDATDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKLSGGEKQRVAIARAILKNPPI 158 (236)
T ss_pred EECCCChhhcchHHHHHhhcCCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999987555667778888999999999999999999999998999999999999999999999999
Q ss_pred EEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhcCCEEEEEeCCEEEEecChhHHhhccCC
Q 048639 1046 MLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVINSDVIVVMDKGEVVEMGSHSTLVAESQG 1125 (1139)
Q Consensus 1046 LlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~~DrI~vl~~G~ive~G~~~eLl~~~~g 1125 (1139)
|||||||++||+++...+.+.|++.. + ++|+|+++|+++.+..||++++|++|++++.|+++++.++ .+
T Consensus 159 lllDEP~~~LD~~~~~~l~~~l~~~~---------~-~~tiii~sh~~~~~~~~d~~~~l~~g~i~~~~~~~~~~~~-~~ 227 (236)
T cd03253 159 LLLDEATSALDTHTEREIQAALRDVS---------K-GRTTIVIAHRLSTIVNADKIIVLKDGRIVERGTHEELLAK-GG 227 (236)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHhc---------C-CCEEEEEcCCHHHHHhCCEEEEEECCEEEeeCCHHHHhhc-cc
Confidence 99999999999999999999998764 3 4569999999999988999999999999999999999875 67
Q ss_pred hHHHHHHH
Q 048639 1126 VYSRLYQL 1133 (1139)
Q Consensus 1126 ~f~~l~~~ 1133 (1139)
.|+.++..
T Consensus 228 ~~~~~~~~ 235 (236)
T cd03253 228 LYAEMWKA 235 (236)
T ss_pred HHHHHHhc
Confidence 78777654
No 130
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.2e-45 Score=408.10 Aligned_cols=214 Identities=34% Similarity=0.588 Sum_probs=187.3
Q ss_pred ccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcc
Q 048639 255 GNIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKN 334 (1139)
Q Consensus 255 ~~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~ 334 (1139)
..++++||+++|+ +..+++|+||+|++||+++++|||||||||+|++|+|+..|++|+|.+||+++.+++++ ++.
T Consensus 4 ~~l~i~~v~k~yg---~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~--kR~ 78 (352)
T COG3842 4 PALEIRNVSKSFG---DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPE--KRP 78 (352)
T ss_pred ceEEEEeeeeecC---CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChh--hcc
Confidence 3599999999997 35699999999999999999999999999999999999999999999999999998876 578
Q ss_pred eEEEecCCCCCcc-cHHHHHhcCCC---CCCHH----HHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHH
Q 048639 335 IGAVSQEPSLFTG-SLMDNIKVGNM---DADDE----QIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAI 406 (1139)
Q Consensus 335 i~~v~Q~~~l~~~-ti~~ni~~g~~---~~~~~----~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~l 406 (1139)
|++|||+..||+- ||+|||.||.. ....+ ++.++++..++.++ -..++.+|||||||||||
T Consensus 79 ig~VFQ~YALFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L~~~-----------~~R~p~qLSGGQqQRVAL 147 (352)
T COG3842 79 IGMVFQSYALFPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELVGLEGF-----------ADRKPHQLSGGQQQRVAL 147 (352)
T ss_pred cceeecCcccCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHcCchhh-----------hhhChhhhChHHHHHHHH
Confidence 9999999999975 99999999965 11222 44455555544443 345567999999999999
Q ss_pred HHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CCeEEEEecCccchh-ccCEEEEEeCcEEEEecChhhhhcc
Q 048639 407 ARAIVKNPPILLLDEATSALDSESEKLVQEALERAMQ--GRTVILIAHRMSTIV-NADMIAVVEDGQVTETGTHHSLLQT 483 (1139)
Q Consensus 407 ARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~itH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~~ 483 (1139)
||||..+|++||||||.||||.+-+..++..++++.+ |.|.|+||||.++.. .+|||.||++|+|...|+++|+...
T Consensus 148 ARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~eiY~~ 227 (352)
T COG3842 148 ARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEIYER 227 (352)
T ss_pred HHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCceeecCCHHHHhhC
Confidence 9999999999999999999999999999988887653 899999999998875 5999999999999999999999875
Q ss_pred c
Q 048639 484 S 484 (1139)
Q Consensus 484 ~ 484 (1139)
+
T Consensus 228 P 228 (352)
T COG3842 228 P 228 (352)
T ss_pred c
Confidence 4
No 131
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=3.2e-45 Score=353.09 Aligned_cols=209 Identities=33% Similarity=0.600 Sum_probs=186.6
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcceE
Q 048639 257 IDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNIG 336 (1139)
Q Consensus 257 i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 336 (1139)
+.+++|.|+|...+ -..+++|++||++||+||||||||||+++|+|+..|.+|+|.|+|+|....++. ++-++
T Consensus 2 l~L~~V~~~y~~~~-----~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~--~RPVS 74 (231)
T COG3840 2 LALDDVRFSYGHLP-----MRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPA--ERPVS 74 (231)
T ss_pred ccccceEEeeCcce-----EEEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCcc--cCChh
Confidence 56789999996322 367899999999999999999999999999999999999999999998876664 45799
Q ss_pred EEecCCCCCcc-cHHHHHhcCCC-C-----CCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHH
Q 048639 337 AVSQEPSLFTG-SLMDNIKVGNM-D-----ADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARA 409 (1139)
Q Consensus 337 ~v~Q~~~l~~~-ti~~ni~~g~~-~-----~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARa 409 (1139)
+++||..||.- ||.+||.+|.. . ...+++..++...++..+.+++|. +||||||||+||||+
T Consensus 75 mlFQEnNLFaHLtV~qNigLGl~P~LkL~a~~r~~v~~aa~~vGl~~~~~RLP~-----------~LSGGqRQRvALARc 143 (231)
T COG3840 75 MLFQENNLFAHLTVAQNIGLGLSPGLKLNAEQREKVEAAAAQVGLAGFLKRLPG-----------ELSGGQRQRVALARC 143 (231)
T ss_pred hhhhccccchhhhhhhhhcccCCcccccCHHHHHHHHHHHHHhChhhHhhhCcc-----------ccCchHHHHHHHHHH
Confidence 99999999975 99999999953 1 235678888889999999999985 799999999999999
Q ss_pred HccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhcc
Q 048639 410 IVKNPPILLLDEATSALDSESEKLVQEALERAM--QGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQT 483 (1139)
Q Consensus 410 l~~~~~illlDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 483 (1139)
|+++.+||+||||+|+|||.-+..+...+.++. ++.|++||||+++.+.. +|+++++++|||.++|+.+++.+.
T Consensus 144 lvR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~~~~~~ 220 (231)
T COG3840 144 LVREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQELLSG 220 (231)
T ss_pred HhccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHHHHhcc
Confidence 999999999999999999999999999888765 47899999999999876 999999999999999999998764
No 132
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=6e-45 Score=411.83 Aligned_cols=223 Identities=31% Similarity=0.492 Sum_probs=192.6
Q ss_pred EEEEeEEEECCCCC-CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHH---Hh
Q 048639 886 IEFQNIKFNYPSRP-EVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRR---LR 961 (1139)
Q Consensus 886 I~~~nvsf~Y~~~~-~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~---lR 961 (1139)
|+++||+++|+... ..++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++..++... +|
T Consensus 2 I~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~r 81 (343)
T TIGR02314 2 IKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKAR 81 (343)
T ss_pred EEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 78999999996321 246999999999999999999999999999999999999999999999999999887654 57
Q ss_pred hhceEEcccccccc-ccHHHHhccCCC--cCC----HHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHH
Q 048639 962 SQIGLVQQEPLLFS-CSIRNNICYGNE--AAS----EAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIA 1034 (1139)
Q Consensus 962 ~~i~~V~Qdp~LF~-gTIreNL~~~~~--~~s----d~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrla 1034 (1139)
++|+||||++.+|. .|+++|+.++.. ..+ ++++.++++.+++.++.++.| ..||||||||++
T Consensus 82 ~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~v~e~l~~vgL~~~~~~~~-----------~~LSgGqkQRV~ 150 (343)
T TIGR02314 82 RQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKRKVTELLALVGLGDKHDSYP-----------SNLSGGQKQRVA 150 (343)
T ss_pred cCEEEEECCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhCCh-----------hhCCHHHHHHHH
Confidence 89999999999995 799999986421 122 345778899999987655443 479999999999
Q ss_pred HHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEEEe
Q 048639 1035 IARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVVEM 1113 (1139)
Q Consensus 1035 lARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ive~ 1113 (1139)
|||||+.+|+|||||||||+||+.+...+.+.|++... +.+.|+|+|||+++.+.. ||||++|++|+|+|.
T Consensus 151 IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~--------~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~ 222 (343)
T TIGR02314 151 IARALASNPKVLLCDEATSALDPATTQSILELLKEINR--------RLGLTILLITHEMDVVKRICDCVAVISNGELIEQ 222 (343)
T ss_pred HHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH--------hcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEE
Confidence 99999999999999999999999999999999998641 224569999999999976 999999999999999
Q ss_pred cChhHHhhccCChH
Q 048639 1114 GSHSTLVAESQGVY 1127 (1139)
Q Consensus 1114 G~~~eLl~~~~g~f 1127 (1139)
|++++++.++...+
T Consensus 223 g~~~~v~~~p~~~~ 236 (343)
T TIGR02314 223 GTVSEIFSHPKTPL 236 (343)
T ss_pred cCHHHHHcCCCcHH
Confidence 99999987654444
No 133
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-44 Score=393.59 Aligned_cols=230 Identities=55% Similarity=0.879 Sum_probs=208.5
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcceE
Q 048639 257 IDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNIG 336 (1139)
Q Consensus 257 i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 336 (1139)
|+++|++++|++. +.++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (234)
T cd03251 1 VEFKNVTFRYPGD-GPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQIG 79 (234)
T ss_pred CEEEEEEEEeCCC-CccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhEE
Confidence 4789999999643 236999999999999999999999999999999999999999999999999988777777888999
Q ss_pred EEecCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHccCCCE
Q 048639 337 AVSQEPSLFTGSLMDNIKVGNMDADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVKNPPI 416 (1139)
Q Consensus 337 ~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~~~~i 416 (1139)
|++|++++|+.|++||+.++.+....+++.+.+....+.+.++.+|.|+++..+..+.+||||||||++|||||+.+|++
T Consensus 80 ~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 159 (234)
T cd03251 80 LVSQDVFLFNDTVAENIAYGRPGATREEVEEAARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARALLKDPPI 159 (234)
T ss_pred EeCCCCeeccccHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999987654455566666777778889999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhccCEEEEEeCcEEEEecChhhhhccchHH
Q 048639 417 LLLDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVNADMIAVVEDGQVTETGTHHSLLQTSDFY 487 (1139)
Q Consensus 417 lllDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~ 487 (1139)
+||||||++||+.+...+.+.|+++.+++|+|++||+++.+..||++++|++|++++.|+++++....+.|
T Consensus 160 llLDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~~~~ 230 (234)
T cd03251 160 LILDEATSALDTESERLVQAALERLMKNRTTFVIAHRLSTIENADRIVVLEDGKIVERGTHEELLAQGGVY 230 (234)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEecCCeEeeeCCHHHHHHcCcch
Confidence 99999999999999999999999887789999999999999889999999999999999999886654443
No 134
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=1.8e-44 Score=389.52 Aligned_cols=221 Identities=43% Similarity=0.690 Sum_probs=205.4
Q ss_pred ccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhh
Q 048639 884 GRIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQ 963 (1139)
Q Consensus 884 g~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~ 963 (1139)
|.|+++|++++|+.. +.++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++
T Consensus 1 ~~l~~~~l~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 79 (221)
T cd03244 1 GDIEFKNVSLRYRPN-LPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLRSR 79 (221)
T ss_pred CcEEEEEEEEecCCC-CcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHhhh
Confidence 468999999999742 3469999999999999999999999999999999999999999999999999998888889999
Q ss_pred ceEEccccccccccHHHHhccCCCcCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhcCCC
Q 048639 964 IGLVQQEPLLFSCSIRNNICYGNEAASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIARTLLKRP 1043 (1139)
Q Consensus 964 i~~V~Qdp~LF~gTIreNL~~~~~~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalARALlr~p 1043 (1139)
++|+||+|.+|++|+++|+.+.. ..+++++.++++..++.+++..+|.|+++.+++.+.+||+|||||++|||||+++|
T Consensus 80 i~~~~q~~~l~~~tv~enl~~~~-~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~laral~~~p 158 (221)
T cd03244 80 ISIIPQDPVLFSGTIRSNLDPFG-EYSDEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLARALLRKS 158 (221)
T ss_pred EEEECCCCccccchHHHHhCcCC-CCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999998764 35678899999999999999999999999999999999999999999999999999
Q ss_pred CEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhcCCEEEEEeCCEEEEecCh
Q 048639 1044 AIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVINSDVIVVMDKGEVVEMGSH 1116 (1139)
Q Consensus 1044 ~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~~DrI~vl~~G~ive~G~~ 1116 (1139)
++|||||||++||+.+.+.+.+.|++.. .+ +|+|++||+++.+..||+|++|++|++++.|++
T Consensus 159 ~llllDEP~~~LD~~~~~~l~~~l~~~~---------~~-~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~ 221 (221)
T cd03244 159 KILVLDEATASVDPETDALIQKTIREAF---------KD-CTVLTIAHRLDTIIDSDRILVLDKGRVVEFDSP 221 (221)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHhc---------CC-CEEEEEeCCHHHHhhCCEEEEEECCeEEecCCC
Confidence 9999999999999999999999999764 33 569999999999999999999999999998864
No 135
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.1e-44 Score=392.72 Aligned_cols=233 Identities=53% Similarity=0.902 Sum_probs=212.4
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhce
Q 048639 886 IEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQIG 965 (1139)
Q Consensus 886 I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~ 965 (1139)
|+++|++++|+++ ..++|+|+||++++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (234)
T cd03251 1 VEFKNVTFRYPGD-GPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQIG 79 (234)
T ss_pred CEEEEEEEEeCCC-CccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhEE
Confidence 5789999999643 236999999999999999999999999999999999999999999999999998888888899999
Q ss_pred EEccccccccccHHHHhccCCCcCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhcCCCCE
Q 048639 966 LVQQEPLLFSCSIRNNICYGNEAASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIARTLLKRPAI 1045 (1139)
Q Consensus 966 ~V~Qdp~LF~gTIreNL~~~~~~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalARALlr~p~I 1045 (1139)
|+||+|.+|..|++||+.++....+.+++.+.++..++.++++.+|.|+++..+.....||||||||++|||||+++|++
T Consensus 80 ~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 159 (234)
T cd03251 80 LVSQDVFLFNDTVAENIAYGRPGATREEVEEAARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARALLKDPPI 159 (234)
T ss_pred EeCCCCeeccccHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999987554566778888889999999999999999999988999999999999999999999999
Q ss_pred EEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhcCCEEEEEeCCEEEEecChhHHhhccCC
Q 048639 1046 MLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVINSDVIVVMDKGEVVEMGSHSTLVAESQG 1125 (1139)
Q Consensus 1046 LlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~~DrI~vl~~G~ive~G~~~eLl~~~~g 1125 (1139)
|||||||++||+.+...+.+.|++.. + ++|+|++||+++.+..||+|++|++|++++.|+++++.+. .+
T Consensus 160 llLDEP~~~LD~~~~~~l~~~l~~~~---------~-~~tii~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~-~~ 228 (234)
T cd03251 160 LILDEATSALDTESERLVQAALERLM---------K-NRTTFVIAHRLSTIENADRIVVLEDGKIVERGTHEELLAQ-GG 228 (234)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhc---------C-CCEEEEEecCHHHHhhCCEEEEecCCeEeeeCCHHHHHHc-Cc
Confidence 99999999999999999999999764 3 3569999999999988999999999999999999999876 56
Q ss_pred hHHHH
Q 048639 1126 VYSRL 1130 (1139)
Q Consensus 1126 ~f~~l 1130 (1139)
.|+.+
T Consensus 229 ~~~~~ 233 (234)
T cd03251 229 VYAKL 233 (234)
T ss_pred chhhh
Confidence 66543
No 136
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.7e-44 Score=392.35 Aligned_cols=233 Identities=52% Similarity=0.844 Sum_probs=211.8
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcceE
Q 048639 257 IDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNIG 336 (1139)
Q Consensus 257 i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 336 (1139)
++++|++++|++ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++
T Consensus 1 l~~~~l~~~~~~--~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~i~ 78 (236)
T cd03253 1 IEFENVTFAYDP--GRPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRAIG 78 (236)
T ss_pred CEEEEEEEEeCC--CCceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhhEE
Confidence 468999999963 245999999999999999999999999999999999999999999999999998888888888999
Q ss_pred EEecCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHccCCCE
Q 048639 337 AVSQEPSLFTGSLMDNIKVGNMDADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVKNPPI 416 (1139)
Q Consensus 337 ~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~~~~i 416 (1139)
|++|++++|+.|++||+.++.+....+++...+....+.+.+..+|.|+++.++.++.+||||||||++|||||+++|++
T Consensus 79 ~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~LS~G~~~rl~la~aL~~~p~l 158 (236)
T cd03253 79 VVPQDTVLFNDTIGYNIRYGRPDATDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKLSGGEKQRVAIARAILKNPPI 158 (236)
T ss_pred EECCCChhhcchHHHHHhhcCCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999987655556666777777788888899999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhccCEEEEEeCcEEEEecChhhhhccchHHHHHH
Q 048639 417 LLLDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVNADMIAVVEDGQVTETGTHHSLLQTSDFYNRLF 491 (1139)
Q Consensus 417 lllDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~ 491 (1139)
+||||||++||+.+...+.+.|.++.+++|+|++||+++.+..||++++|++|++++.|+.+++......++..+
T Consensus 159 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~d~~~~l~~g~i~~~~~~~~~~~~~~~~~~~~ 233 (236)
T cd03253 159 LLLDEATSALDTHTEREIQAALRDVSKGRTTIVIAHRLSTIVNADKIIVLKDGRIVERGTHEELLAKGGLYAEMW 233 (236)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHhCCEEEEEECCEEEeeCCHHHHhhcccHHHHHH
Confidence 999999999999999999999988766899999999999998899999999999999999998877666665544
No 137
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.6e-44 Score=390.54 Aligned_cols=225 Identities=51% Similarity=0.857 Sum_probs=206.9
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcce
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNI 335 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 335 (1139)
.|+++|++++|++ .+++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.+.+...+++.+
T Consensus 2 ~l~~~~l~~~~~~--~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 79 (229)
T cd03254 2 EIEFENVNFSYDE--KKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSMI 79 (229)
T ss_pred eEEEEEEEEecCC--CCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhhE
Confidence 5899999999963 23599999999999999999999999999999999999999999999999998877777888899
Q ss_pred EEEecCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHccCCC
Q 048639 336 GAVSQEPSLFTGSLMDNIKVGNMDADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVKNPP 415 (1139)
Q Consensus 336 ~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~~~~ 415 (1139)
+|++|++++|+.|++||+.++.+....+++.+++...++.++++.+|.|+++.++....+||||||||++|||||+.+|+
T Consensus 80 ~~~~q~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~~~p~ 159 (229)
T cd03254 80 GVVLQDTFLFSGTIMENIRLGRPNATDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAMLRDPK 159 (229)
T ss_pred EEecCCchhhhhHHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999998765555666777777778888999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhccCEEEEEeCcEEEEecChhhhhc
Q 048639 416 ILLLDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVNADMIAVVEDGQVTETGTHHSLLQ 482 (1139)
Q Consensus 416 illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~ 482 (1139)
++||||||++||+.+.+.+.+.+.++.+++|+|++||+++.+..||++++|++|++++.|+.+++.+
T Consensus 160 llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~ 226 (229)
T cd03254 160 ILILDEATSNIDTETEKLIQEALEKLMKGRTSIIIAHRLSTIKNADKILVLDDGKIIEEGTHDELLA 226 (229)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEEeCCeEEEeCCHHHHHh
Confidence 9999999999999999999999998877899999999999988899999999999999998887754
No 138
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=3.3e-44 Score=392.00 Aligned_cols=233 Identities=64% Similarity=1.011 Sum_probs=208.2
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcceE
Q 048639 257 IDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNIG 336 (1139)
Q Consensus 257 i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 336 (1139)
++++|+++.|++..++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++
T Consensus 1 l~i~~l~~~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 80 (238)
T cd03249 1 IEFKNVSFRYPSRPDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQIG 80 (238)
T ss_pred CeEEEEEEecCCCCCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhhEE
Confidence 46899999997533356999999999999999999999999999999999999999999999999987777777778899
Q ss_pred EEecCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHccCCCE
Q 048639 337 AVSQEPSLFTGSLMDNIKVGNMDADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVKNPPI 416 (1139)
Q Consensus 337 ~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~~~~i 416 (1139)
|++|++.+++.|++||+.++.+....+++...+...++.+++..+|.|+++..+....+||||||||++|||||+.+|++
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 160 (238)
T cd03249 81 LVSQEPVLFDGTIAENIRYGKPDATDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARALLRNPKI 160 (238)
T ss_pred EECCchhhhhhhHHHHhhccCCCCCHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999989999999987654455556666666677788899999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhccCEEEEEeCcEEEEecChhhhhccchHHHH
Q 048639 417 LLLDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVNADMIAVVEDGQVTETGTHHSLLQTSDFYNR 489 (1139)
Q Consensus 417 lllDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~ 489 (1139)
+||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+..||++++|++|++++.|+.+++......++.
T Consensus 161 lllDEP~~gLD~~~~~~l~~~l~~~~~g~~vi~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~~~~~~ 233 (238)
T cd03249 161 LLLDEATSALDAESEKLVQEALDRAMKGRTTIVIAHRLSTIRNADLIAVLQNGQVVEQGTHDELMAQKGVYAK 233 (238)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEEeCCHHHHhhcChhHHH
Confidence 9999999999999999999999887678999999999999888999999999999999999888765444443
No 139
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=3.1e-44 Score=392.17 Aligned_cols=235 Identities=61% Similarity=0.975 Sum_probs=212.2
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhce
Q 048639 886 IEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQIG 965 (1139)
Q Consensus 886 I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~ 965 (1139)
|+++|++++|++..+.++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 1 l~i~~l~~~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 80 (238)
T cd03249 1 IEFKNVSFRYPSRPDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQIG 80 (238)
T ss_pred CeEEEEEEecCCCCCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhhEE
Confidence 47899999997533346999999999999999999999999999999999999999999999999998888888888999
Q ss_pred EEccccccccccHHHHhccCCCcCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhcCCCCE
Q 048639 966 LVQQEPLLFSCSIRNNICYGNEAASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIARTLLKRPAI 1045 (1139)
Q Consensus 966 ~V~Qdp~LF~gTIreNL~~~~~~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalARALlr~p~I 1045 (1139)
|+||+|.+|+.|+++|+.++.+....+++.+.++..++.+++..+|.|+++.+.....+||||||||++|||||+.+|++
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 160 (238)
T cd03249 81 LVSQEPVLFDGTIAENIRYGKPDATDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARALLRNPKI 160 (238)
T ss_pred EECCchhhhhhhHHHHhhccCCCCCHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999986554556778888888999999999999999999988899999999999999999999999
Q ss_pred EEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhcCCEEEEEeCCEEEEecChhHHhhccCC
Q 048639 1046 MLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVINSDVIVVMDKGEVVEMGSHSTLVAESQG 1125 (1139)
Q Consensus 1046 LlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~~DrI~vl~~G~ive~G~~~eLl~~~~g 1125 (1139)
|||||||++||+.+.+.+.+.|++.. . ++|+|++||+++.+..||+|++|++|++++.|+++++.+. .+
T Consensus 161 lllDEP~~gLD~~~~~~l~~~l~~~~---------~-g~~vi~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~-~~ 229 (238)
T cd03249 161 LLLDEATSALDAESEKLVQEALDRAM---------K-GRTTIVIAHRLSTIRNADLIAVLQNGQVVEQGTHDELMAQ-KG 229 (238)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhc---------C-CCEEEEEeCCHHHHhhCCEEEEEECCEEEEeCCHHHHhhc-Ch
Confidence 99999999999999999999998753 3 3459999999999988999999999999999999999875 55
Q ss_pred hHHHHH
Q 048639 1126 VYSRLY 1131 (1139)
Q Consensus 1126 ~f~~l~ 1131 (1139)
.++.++
T Consensus 230 ~~~~~~ 235 (238)
T cd03249 230 VYAKLV 235 (238)
T ss_pred hHHHHh
Confidence 555554
No 140
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=8.7e-45 Score=384.20 Aligned_cols=216 Identities=29% Similarity=0.509 Sum_probs=191.6
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhc
Q 048639 885 RIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQI 964 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i 964 (1139)
.++++|++|+|++ .++|+|+||+|++||.++|+||||||||||+++|.|+.+|.+|+|.+||.++.+++.+++-+++
T Consensus 2 ~L~~~~ls~~y~~---~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~i 78 (258)
T COG1120 2 MLEVENLSFGYGG---KPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKKL 78 (258)
T ss_pred eeEEEEEEEEECC---eeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhhE
Confidence 3789999999963 4799999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEcccc-ccccccHHHHhccCCC---------c-CCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHH
Q 048639 965 GLVQQEP-LLFSCSIRNNICYGNE---------A-ASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRI 1033 (1139)
Q Consensus 965 ~~V~Qdp-~LF~gTIreNL~~~~~---------~-~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl 1033 (1139)
+||||++ .-|.-|++|=+.+|.- . .+++.+.+|++.+++.++.++. + ..||||||||+
T Consensus 79 a~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r~-------~----~~LSGGerQrv 147 (258)
T COG1120 79 AYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADRP-------V----DELSGGERQRV 147 (258)
T ss_pred EEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcCc-------c----cccChhHHHHH
Confidence 9999996 5567799998887742 1 1233588899999999887542 2 36999999999
Q ss_pred HHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhh-cCCEEEEEeCCEEEE
Q 048639 1034 AIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVI-NSDVIVVMDKGEVVE 1112 (1139)
Q Consensus 1034 alARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~-~~DrI~vl~~G~ive 1112 (1139)
.|||||.++|+||+||||||+||....-.|++.+++... .++.|+|++.|+++... .||++++|++|+++.
T Consensus 148 ~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~--------~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a 219 (258)
T COG1120 148 LIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNR--------EKGLTVVMVLHDLNLAARYADHLILLKDGKIVA 219 (258)
T ss_pred HHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHH--------hcCCEEEEEecCHHHHHHhCCEEEEEECCeEEe
Confidence 999999999999999999999999999999999998751 23456999999998765 599999999999999
Q ss_pred ecChhHHhhc
Q 048639 1113 MGSHSTLVAE 1122 (1139)
Q Consensus 1113 ~G~~~eLl~~ 1122 (1139)
+|+|+|.+..
T Consensus 220 ~G~p~evlT~ 229 (258)
T COG1120 220 QGTPEEVLTE 229 (258)
T ss_pred ecCcchhcCH
Confidence 9999999864
No 141
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=6e-44 Score=393.49 Aligned_cols=239 Identities=32% Similarity=0.556 Sum_probs=214.9
Q ss_pred CCCccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHH
Q 048639 252 KIDGNIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSL 331 (1139)
Q Consensus 252 ~~~~~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~ 331 (1139)
...+.|+++|++++|++. +.++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|+++.+.+...+
T Consensus 15 ~~~~~i~~~~l~~~~~~~-~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~ 93 (257)
T cd03288 15 GLGGEIKIHDLCVRYENN-LKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTL 93 (257)
T ss_pred cCCceEEEEEEEEEeCCC-CCcceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccCCCCCeEEECCEEhhhCCHHHH
Confidence 345689999999999742 2469999999999999999999999999999999999999999999999999988888888
Q ss_pred hcceEEEecCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHc
Q 048639 332 RKNIGAVSQEPSLFTGSLMDNIKVGNMDADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIV 411 (1139)
Q Consensus 332 ~~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~ 411 (1139)
++.|+|++|+|++|++|++||+.+... ...+++.++....++.+.+..+|.|+++.+++.+.+||||||||++|||||+
T Consensus 94 ~~~i~~v~q~~~l~~~tv~~nl~~~~~-~~~~~~~~~l~~~~l~~~~~~~~~~l~~~~~~~~~~LS~G~~qrl~laral~ 172 (257)
T cd03288 94 RSRLSIILQDPILFSGSIRFNLDPECK-CTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARAFV 172 (257)
T ss_pred hhhEEEECCCCcccccHHHHhcCcCCC-CCHHHHHHHHHHhCcHHHHhhcccccCcEeccCCCcCCHHHHHHHHHHHHHh
Confidence 999999999999999999999976432 2345566777777888889999999999999999999999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhccCEEEEEeCcEEEEecChhhhhcc-chHHHHH
Q 048639 412 KNPPILLLDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVNADMIAVVEDGQVTETGTHHSLLQT-SDFYNRL 490 (1139)
Q Consensus 412 ~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~-~~~~~~~ 490 (1139)
++|+++||||||++||++++..+.+.++++.+++|+|++||+++.+..||+|++|++|++++.|+++++.+. .+.++.+
T Consensus 173 ~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~~~~~~~~~ 252 (257)
T cd03288 173 RKSSILIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVSTILDADLVLVLSRGILVECDTPENLLAQEDGVFASL 252 (257)
T ss_pred cCCCEEEEeCCccCCCHHHHHHHHHHHHHhcCCCEEEEEecChHHHHhCCEEEEEECCEEEEeCCHHHHHhccchHHHHH
Confidence 999999999999999999999999999887778999999999999988999999999999999999998765 3556666
Q ss_pred Hh
Q 048639 491 FT 492 (1139)
Q Consensus 491 ~~ 492 (1139)
+.
T Consensus 253 ~~ 254 (257)
T cd03288 253 VR 254 (257)
T ss_pred Hh
Confidence 54
No 142
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=6.6e-45 Score=354.46 Aligned_cols=209 Identities=33% Similarity=0.511 Sum_probs=188.3
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChH---HHhh
Q 048639 886 IEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLR---RLRS 962 (1139)
Q Consensus 886 I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~---~lR~ 962 (1139)
|+|+||+.+|++. .++|+||||+|++||.+-++|||||||||++++|++...|+.|+|.++|.|++.+.-+ -||+
T Consensus 2 I~f~~V~k~Y~~g--~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~LRR 79 (223)
T COG2884 2 IRFENVSKAYPGG--REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFLRR 79 (223)
T ss_pred eeehhhhhhcCCC--chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchhhh
Confidence 7999999999864 5699999999999999999999999999999999999999999999999999888655 5899
Q ss_pred hceEEccccccc-cccHHHHhccCCC------cCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHH
Q 048639 963 QIGLVQQEPLLF-SCSIRNNICYGNE------AASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAI 1035 (1139)
Q Consensus 963 ~i~~V~Qdp~LF-~gTIreNL~~~~~------~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlal 1035 (1139)
+||+|+||--|. +-|+.||+++.-. ..-.+++.++|+.+||.+-...+|. .|||||+||+||
T Consensus 80 ~IGvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~k~~~lP~-----------~LSGGEQQRvaI 148 (223)
T COG2884 80 QIGVVFQDFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKHKARALPS-----------QLSGGEQQRVAI 148 (223)
T ss_pred eeeeEeeeccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccchhhhcCcc-----------ccCchHHHHHHH
Confidence 999999999766 5699999987532 1224578899999999999999984 799999999999
Q ss_pred HHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhcC-CEEEEEeCCEEEEec
Q 048639 1036 ARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVINS-DVIVVMDKGEVVEMG 1114 (1139)
Q Consensus 1036 ARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~~-DrI~vl~~G~ive~G 1114 (1139)
|||++.+|++||-||||.+||+++...|++.+++.. ..+|||++.||+.+.+..+ -|++.+++|+++...
T Consensus 149 ARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeein---------r~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~ 219 (223)
T COG2884 149 ARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEIN---------RLGTTVLMATHDLELVNRMRHRVLALEDGRLVRDE 219 (223)
T ss_pred HHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHh---------hcCcEEEEEeccHHHHHhccCcEEEEeCCEEEecc
Confidence 999999999999999999999999999999999875 5678899999999999884 689999999999876
Q ss_pred Ch
Q 048639 1115 SH 1116 (1139)
Q Consensus 1115 ~~ 1116 (1139)
.+
T Consensus 220 ~~ 221 (223)
T COG2884 220 SR 221 (223)
T ss_pred cc
Confidence 54
No 143
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.5e-44 Score=388.73 Aligned_cols=227 Identities=49% Similarity=0.856 Sum_probs=209.6
Q ss_pred ccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhh
Q 048639 884 GRIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQ 963 (1139)
Q Consensus 884 g~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~ 963 (1139)
|.|+++|++++|++ ..++|+|+||+|++||+++|+||||||||||+++|.|+++|.+|+|.+||.++...+...+|++
T Consensus 1 ~~l~~~~l~~~~~~--~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 78 (229)
T cd03254 1 GEIEFENVNFSYDE--KKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSM 78 (229)
T ss_pred CeEEEEEEEEecCC--CCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhh
Confidence 46899999999963 2359999999999999999999999999999999999999999999999999988888889999
Q ss_pred ceEEccccccccccHHHHhccCCCcCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhcCCC
Q 048639 964 IGLVQQEPLLFSCSIRNNICYGNEAASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIARTLLKRP 1043 (1139)
Q Consensus 964 i~~V~Qdp~LF~gTIreNL~~~~~~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalARALlr~p 1043 (1139)
++|+||++.+|.+|+++|+.++.+...++++.++++..++.++++.+|.|+++.++....+||||||||++|||||+++|
T Consensus 79 i~~~~q~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~~~p 158 (229)
T cd03254 79 IGVVLQDTFLFSGTIMENIRLGRPNATDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAMLRDP 158 (229)
T ss_pred EEEecCCchhhhhHHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999875555667888899999999999999999999999889999999999999999999999
Q ss_pred CEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhcCCEEEEEeCCEEEEecChhHHhhc
Q 048639 1044 AIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVINSDVIVVMDKGEVVEMGSHSTLVAE 1122 (1139)
Q Consensus 1044 ~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~~DrI~vl~~G~ive~G~~~eLl~~ 1122 (1139)
++|||||||++||+.+.+.+.+.|++.. . ++|+|+|||+++.+..||+|++|++|++++.|++++++++
T Consensus 159 ~llllDEP~~~LD~~~~~~l~~~l~~~~---------~-~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~~ 227 (229)
T cd03254 159 KILILDEATSNIDTETEKLIQEALEKLM---------K-GRTSIIIAHRLSTIKNADKILVLDDGKIIEEGTHDELLAK 227 (229)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHhc---------C-CCEEEEEecCHHHHhhCCEEEEEeCCeEEEeCCHHHHHhh
Confidence 9999999999999999999999998763 3 4569999999999988999999999999999999988764
No 144
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.1e-44 Score=382.74 Aligned_cols=219 Identities=33% Similarity=0.596 Sum_probs=190.7
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCC-CCCHHHHhcc
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIK-DLDLKSLRKN 334 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~-~~~~~~~~~~ 334 (1139)
.++++|++|+|+++ .++|+|+||+|++||.++|+|+||||||||+++++|+++|++|.|.++|.++. ..+...+|++
T Consensus 3 ~i~~~~l~~~y~~~--~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~~ 80 (235)
T COG1122 3 MIEAENLSFRYPGR--KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQK 80 (235)
T ss_pred eEEEEEEEEEcCCC--ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhcc
Confidence 48899999999864 57999999999999999999999999999999999999999999999999988 4788899999
Q ss_pred eEEEecCC--CCCcccHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHH
Q 048639 335 IGAVSQEP--SLFTGSLMDNIKVGNMD--ADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAI 410 (1139)
Q Consensus 335 i~~v~Q~~--~l~~~ti~~ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal 410 (1139)
+|||+|+| .+|..||.|.+.||..+ .+.+++.+... +.++.. |+.......+.+||||||||+|||.+|
T Consensus 81 vG~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~rv~-----~~l~~v--gl~~~~~r~p~~LSGGqkqRvaIA~vL 153 (235)
T COG1122 81 VGLVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEERVA-----EALELV--GLEELLDRPPFNLSGGQKQRVAIAGVL 153 (235)
T ss_pred eEEEEECcccccccCcHHHHHhhchhhcCCCHHHHHHHHH-----HHHHHc--CchhhccCCccccCCcceeeHHhhHHH
Confidence 99999999 78999999999999653 33333333222 222322 333345567789999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhcc
Q 048639 411 VKNPPILLLDEATSALDSESEKLVQEALERAMQ--GRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQT 483 (1139)
Q Consensus 411 ~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 483 (1139)
..+|++||||||||+||+...+.+.+.++++.+ ++|+|++|||++.+.. ||++++|++|+++.+|+++++.+.
T Consensus 154 a~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i~~~ 229 (235)
T COG1122 154 AMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKILADGDPAEIFND 229 (235)
T ss_pred HcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCCHHHHhhh
Confidence 999999999999999999999999999999864 5899999999999977 999999999999999999888754
No 145
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-44 Score=369.21 Aligned_cols=218 Identities=32% Similarity=0.478 Sum_probs=178.8
Q ss_pred cEEEEeEEEECCCCC-CCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCC-CHHHHhc
Q 048639 256 NIDIRDVCFAYPSRP-DQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDL-DLKSLRK 333 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~-~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~-~~~~~~~ 333 (1139)
.++++|+++.|+... ..++|+||||+|.+||+++|+|+||||||||+++|+|+.+|++|+|.++|.++... ..+..++
T Consensus 3 ~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~~ 82 (252)
T COG1124 3 LLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFYR 82 (252)
T ss_pred eEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhcc
Confidence 489999999997531 12599999999999999999999999999999999999999999999999877554 3346778
Q ss_pred ceEEEecCCC--CCc-ccHHHHHhcCCC----CCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHH
Q 048639 334 NIGAVSQEPS--LFT-GSLMDNIKVGNM----DADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAI 406 (1139)
Q Consensus 334 ~i~~v~Q~~~--l~~-~ti~~ni~~g~~----~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~l 406 (1139)
.|-+|||||. |-+ .||++-|.-+.. +...+++.++++..++ |. .....++.+|||||||||||
T Consensus 83 ~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~~~~~~~i~~~L~~VgL-------~~---~~l~R~P~eLSGGQ~QRiaI 152 (252)
T COG1124 83 PVQMVFQDPYSSLNPRRTVGRILSEPLRPHGLSKSQQRIAELLDQVGL-------PP---SFLDRRPHELSGGQRQRIAI 152 (252)
T ss_pred ceeEEecCCccccCcchhHHHHHhhhhccCCccHHHHHHHHHHHHcCC-------CH---HHHhcCchhcChhHHHHHHH
Confidence 9999999996 333 377776653221 1122333344433332 11 23455677899999999999
Q ss_pred HHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhcc
Q 048639 407 ARAIVKNPPILLLDEATSALDSESEKLVQEALERAMQ--GRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQT 483 (1139)
Q Consensus 407 ARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 483 (1139)
||||..+|++||||||||+||+..+..|++.+.++.+ +.|.|+|||++..+.+ ||||+||++|+++|.++.+++...
T Consensus 153 ARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~~~l~~~ 232 (252)
T COG1124 153 ARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPTEELLSH 232 (252)
T ss_pred HHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEeechhhhhcC
Confidence 9999999999999999999999999999999988765 5699999999999987 999999999999999999998765
No 146
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.9e-44 Score=396.37 Aligned_cols=220 Identities=33% Similarity=0.575 Sum_probs=198.1
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhc
Q 048639 885 RIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQI 964 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i 964 (1139)
.|+++||+.+|.+. .+|+|+||+|+.||.++|+|||||||||++++|.||.+|++|+|.|||.|+.++++++ +.|
T Consensus 3 ~i~l~~v~K~yg~~---~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~--R~i 77 (338)
T COG3839 3 ELELKNVRKSFGSF---EVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEK--RGI 77 (338)
T ss_pred EEEEeeeEEEcCCc---eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhH--CCE
Confidence 58999999999632 2999999999999999999999999999999999999999999999999999998876 789
Q ss_pred eEEccccccccc-cHHHHhccCCCc------CCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHH
Q 048639 965 GLVQQEPLLFSC-SIRNNICYGNEA------ASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIAR 1037 (1139)
Q Consensus 965 ~~V~Qdp~LF~g-TIreNL~~~~~~------~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalAR 1037 (1139)
++|+|+..||+. |+++||.|+... .-++++.++++..++.+.+++.| .+||||||||+||||
T Consensus 78 amVFQ~yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~eva~~L~l~~lL~r~P-----------~~LSGGQrQRVAlaR 146 (338)
T COG3839 78 AMVFQNYALYPHMTVYENIAFGLKLRGVPKAEIDKRVKEVAKLLGLEHLLNRKP-----------LQLSGGQRQRVALAR 146 (338)
T ss_pred EEEeCCccccCCCcHHHHhhhhhhhCCCchHHHHHHHHHHHHHcCChhHHhcCc-----------ccCChhhHHHHHHHH
Confidence 999999999975 999999987431 23567899999999999988877 479999999999999
Q ss_pred HhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEEEecCh
Q 048639 1038 TLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVVEMGSH 1116 (1139)
Q Consensus 1038 ALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~ 1116 (1139)
||+|+|++++||||.|+||++....+...|+++.. .-++|+|.|||+....+. +|||+||++|+|.+.|+|
T Consensus 147 AlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~--------~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p 218 (338)
T COG3839 147 ALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHE--------RLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTP 218 (338)
T ss_pred HHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHH--------hcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCCh
Confidence 99999999999999999999999999988887641 224569999999998886 999999999999999999
Q ss_pred hHHhhccCChHH
Q 048639 1117 STLVAESQGVYS 1128 (1139)
Q Consensus 1117 ~eLl~~~~g~f~ 1128 (1139)
.|+.+++...|-
T Consensus 219 ~ely~~P~n~fV 230 (338)
T COG3839 219 LELYERPANLFV 230 (338)
T ss_pred HHHhhCccchhh
Confidence 999998877663
No 147
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.1e-44 Score=382.69 Aligned_cols=217 Identities=37% Similarity=0.652 Sum_probs=196.5
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccC-CCChHHHhhh
Q 048639 885 RIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIK-EYNLRRLRSQ 963 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~-~~~l~~lR~~ 963 (1139)
.|+++|++|+|+++ .++|+++||+|++||.++|+|+||||||||+++|.|+++|++|.|.+||.+++ ..+...+|++
T Consensus 3 ~i~~~~l~~~y~~~--~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~~ 80 (235)
T COG1122 3 MIEAENLSFRYPGR--KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQK 80 (235)
T ss_pred eEEEEEEEEEcCCC--ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhcc
Confidence 48899999999765 57999999999999999999999999999999999999999999999999998 4889999999
Q ss_pred ceEEcccc--ccccccHHHHhccCCC--cCC----HHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHH
Q 048639 964 IGLVQQEP--LLFSCSIRNNICYGNE--AAS----EAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAI 1035 (1139)
Q Consensus 964 i~~V~Qdp--~LF~gTIreNL~~~~~--~~s----d~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlal 1035 (1139)
+|+|+|+| .+|..||.+.+++|.. ..+ ++++.++++.+++.++.++.| .+||||||||+||
T Consensus 81 vG~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~rv~~~l~~vgl~~~~~r~p-----------~~LSGGqkqRvaI 149 (235)
T COG1122 81 VGLVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEERVAEALELVGLEELLDRPP-----------FNLSGGQKQRVAI 149 (235)
T ss_pred eEEEEECcccccccCcHHHHHhhchhhcCCCHHHHHHHHHHHHHHcCchhhccCCc-----------cccCCcceeeHHh
Confidence 99999999 8999999999999843 223 345788999999988855544 5799999999999
Q ss_pred HHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEEEec
Q 048639 1036 ARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVVEMG 1114 (1139)
Q Consensus 1036 ARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ive~G 1114 (1139)
|.+|..+|++||||||||+||+...+.+.+.++++.. .++.|+|+|||+++.+.. |||++||++|+++.+|
T Consensus 150 A~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~--------~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g 221 (235)
T COG1122 150 AGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKE--------EGGKTIIIVTHDLELVLEYADRVVVLDDGKILADG 221 (235)
T ss_pred hHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHh--------cCCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecC
Confidence 9999999999999999999999999999999998751 223569999999999998 9999999999999999
Q ss_pred ChhHHhhc
Q 048639 1115 SHSTLVAE 1122 (1139)
Q Consensus 1115 ~~~eLl~~ 1122 (1139)
+|+++.++
T Consensus 222 ~p~~i~~~ 229 (235)
T COG1122 222 DPAEIFND 229 (235)
T ss_pred CHHHHhhh
Confidence 99999875
No 148
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.2e-44 Score=376.59 Aligned_cols=210 Identities=29% Similarity=0.503 Sum_probs=180.7
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcce
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNI 335 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 335 (1139)
.|+++|++++|.++ ++|+||||++++|++++|+||||||||||+|+|+|+++|++|+|.+.|.+.+.... +.+|
T Consensus 4 ~i~v~nl~v~y~~~---~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~---~~~I 77 (254)
T COG1121 4 MIEVENLTVSYGNR---PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRK---RLRI 77 (254)
T ss_pred EEEEeeeEEEECCE---eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEcccccccccc---CCeE
Confidence 58999999999642 59999999999999999999999999999999999999999999999988765432 4689
Q ss_pred EEEecCC---CCCcccHHHHHhcCCCCC----------CHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHH
Q 048639 336 GAVSQEP---SLFTGSLMDNIKVGNMDA----------DDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQ 402 (1139)
Q Consensus 336 ~~v~Q~~---~l~~~ti~~ni~~g~~~~----------~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkq 402 (1139)
|||||.. |-|+.||+|-+.+|.... +.+++.++++.+++.++ ......+|||||+|
T Consensus 78 gYVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~~-----------~~r~i~~LSGGQ~Q 146 (254)
T COG1121 78 GYVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMEDL-----------RDRQIGELSGGQKQ 146 (254)
T ss_pred EEcCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchhh-----------hCCcccccCcHHHH
Confidence 9999965 668899999999985422 13556666666655543 33445689999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC-CCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhh
Q 048639 403 RIAIARAIVKNPPILLLDEATSALDSESEKLVQEALERAMQ-GRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSL 480 (1139)
Q Consensus 403 Ri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~-~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l 480 (1139)
|+.|||||+++|++|+|||||+++|+.++..+.+.|+++++ |+||++||||++.+.. +|+|+.|+ ++++..|++++.
T Consensus 147 RV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~~v~~~~D~vi~Ln-~~~~~~G~~~~~ 225 (254)
T COG1121 147 RVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLGLVMAYFDRVICLN-RHLIASGPPEEV 225 (254)
T ss_pred HHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHhHhhCCEEEEEc-CeeEeccChhhc
Confidence 99999999999999999999999999999999999998865 8999999999999875 99999996 568899999998
Q ss_pred hcc
Q 048639 481 LQT 483 (1139)
Q Consensus 481 ~~~ 483 (1139)
...
T Consensus 226 ~~~ 228 (254)
T COG1121 226 LTE 228 (254)
T ss_pred cCH
Confidence 754
No 149
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=1.2e-43 Score=383.12 Aligned_cols=219 Identities=35% Similarity=0.608 Sum_probs=202.8
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcce
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNI 335 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 335 (1139)
.++++|++++|+.. ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.+
T Consensus 2 ~l~~~~l~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 80 (221)
T cd03244 2 DIEFKNVSLRYRPN-LPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLRSRI 80 (221)
T ss_pred cEEEEEEEEecCCC-CcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHhhhE
Confidence 58999999999743 34699999999999999999999999999999999999999999999999999888888888999
Q ss_pred EEEecCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHccCCC
Q 048639 336 GAVSQEPSLFTGSLMDNIKVGNMDADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVKNPP 415 (1139)
Q Consensus 336 ~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~~~~ 415 (1139)
+|++|++.+++.|++||+.+... ...+++.++++..++.+++..+|.|+++..++.+.+||||||||++|||||+.+|+
T Consensus 81 ~~~~q~~~l~~~tv~enl~~~~~-~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~laral~~~p~ 159 (221)
T cd03244 81 SIIPQDPVLFSGTIRSNLDPFGE-YSDEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLARALLRKSK 159 (221)
T ss_pred EEECCCCccccchHHHHhCcCCC-CCHHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999987643 45677788888888888999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhccCEEEEEeCcEEEEecC
Q 048639 416 ILLLDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVNADMIAVVEDGQVTETGT 476 (1139)
Q Consensus 416 illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~ 476 (1139)
++||||||++||+.++..+.+.++++.++.|+|++||+++.+..||++++|++|++++.|+
T Consensus 160 llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~ 220 (221)
T cd03244 160 ILVLDEATASVDPETDALIQKTIREAFKDCTVLTIAHRLDTIIDSDRILVLDKGRVVEFDS 220 (221)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCeEEecCC
Confidence 9999999999999999999999998877899999999999998899999999999998775
No 150
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=4.1e-44 Score=405.08 Aligned_cols=228 Identities=29% Similarity=0.521 Sum_probs=190.6
Q ss_pred EEEEeEEEECCCCC-CCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHH---Hh
Q 048639 257 IDIRDVCFAYPSRP-DQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKS---LR 332 (1139)
Q Consensus 257 i~~~~v~~~y~~~~-~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~---~~ 332 (1139)
|+++|++++|++.. ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++..++..+ +|
T Consensus 2 I~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~r 81 (343)
T TIGR02314 2 IKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKAR 81 (343)
T ss_pred EEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 78999999996321 246999999999999999999999999999999999999999999999999998876544 57
Q ss_pred cceEEEecCCCCCc-ccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHH
Q 048639 333 KNIGAVSQEPSLFT-GSLMDNIKVGNM--DADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARA 409 (1139)
Q Consensus 333 ~~i~~v~Q~~~l~~-~ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARa 409 (1139)
++|+|+||++.+|+ .|++||+.++.. ..+.++..+ .+.+.++.+ |+.......+.+||||||||++||||
T Consensus 82 ~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~-----~v~e~l~~v--gL~~~~~~~~~~LSgGqkQRV~IARA 154 (343)
T TIGR02314 82 RQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKR-----KVTELLALV--GLGDKHDSYPSNLSGGQKQRVAIARA 154 (343)
T ss_pred cCEEEEECCccccccCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CCchhhhCChhhCCHHHHHHHHHHHH
Confidence 89999999999996 699999998532 122222211 122344444 45555667788999999999999999
Q ss_pred HccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhccc--
Q 048639 410 IVKNPPILLLDEATSALDSESEKLVQEALERAMQ--GRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQTS-- 484 (1139)
Q Consensus 410 l~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~-- 484 (1139)
|+.+|++||||||||+||+.+...+.+.|+++.+ +.|+|+|||+++.+.. ||+|++|++|++++.|+++++....
T Consensus 155 L~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~~~~v~~~p~~ 234 (343)
T TIGR02314 155 LASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQGTVSEIFSHPKT 234 (343)
T ss_pred HHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHcCCCc
Confidence 9999999999999999999999999999998753 7999999999999976 9999999999999999999997542
Q ss_pred hHHHHHH
Q 048639 485 DFYNRLF 491 (1139)
Q Consensus 485 ~~~~~~~ 491 (1139)
...+.++
T Consensus 235 ~~~~~~~ 241 (343)
T TIGR02314 235 PLAQKFI 241 (343)
T ss_pred HHHHHHH
Confidence 3344444
No 151
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=1.2e-43 Score=382.85 Aligned_cols=220 Identities=43% Similarity=0.727 Sum_probs=201.2
Q ss_pred ccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhh
Q 048639 884 GRIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQ 963 (1139)
Q Consensus 884 g~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~ 963 (1139)
|+|+++|++++|+++ ..++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++|.++...+...+|++
T Consensus 1 ~~l~~~~l~~~~~~~-~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 79 (220)
T cd03245 1 GRIEFRNVSFSYPNQ-EIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRN 79 (220)
T ss_pred CeEEEEEEEEEcCCC-CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhh
Confidence 468999999999642 2469999999999999999999999999999999999999999999999999988887788899
Q ss_pred ceEEccccccccccHHHHhccCCCcCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhcCCC
Q 048639 964 IGLVQQEPLLFSCSIRNNICYGNEAASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIARTLLKRP 1043 (1139)
Q Consensus 964 i~~V~Qdp~LF~gTIreNL~~~~~~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalARALlr~p 1043 (1139)
++|+||+|.+|..|++||+.++.+..+++++.++++..++.+.+...|.|++|.+.+...+||||||||++||||++.+|
T Consensus 80 i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~~p 159 (220)
T cd03245 80 IGYVPQDVTLFYGTLRDNITLGAPLADDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLNDP 159 (220)
T ss_pred EEEeCCCCccccchHHHHhhcCCCCCCHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999998764444566788899999999999999999999999888999999999999999999999
Q ss_pred CEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhcCCEEEEEeCCEEEEec
Q 048639 1044 AIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVINSDVIVVMDKGEVVEMG 1114 (1139)
Q Consensus 1044 ~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~~DrI~vl~~G~ive~G 1114 (1139)
++|||||||++||+++...+.+.|++.. .+ +|+|++||+++.+..||+|++|++|++++.|
T Consensus 160 ~llllDEPt~~LD~~~~~~l~~~l~~~~---------~~-~tii~~sH~~~~~~~~d~v~~l~~g~i~~~~ 220 (220)
T cd03245 160 PILLLDEPTSAMDMNSEERLKERLRQLL---------GD-KTLIIITHRPSLLDLVDRIIVMDSGRIVADG 220 (220)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHhc---------CC-CEEEEEeCCHHHHHhCCEEEEEeCCeEeecC
Confidence 9999999999999999999999999764 33 5699999999988779999999999998765
No 152
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=9.2e-44 Score=360.89 Aligned_cols=226 Identities=30% Similarity=0.504 Sum_probs=196.0
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChH---HHh
Q 048639 885 RIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLR---RLR 961 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~---~lR 961 (1139)
.|++++|+++|.+ ..||+||||+|++||.+||+|+||||||||++++.|+..|++|+|.|+|.|+.+++-+ .+|
T Consensus 8 ~I~vr~v~~~fG~---~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~ir 84 (263)
T COG1127 8 LIEVRGVTKSFGD---RVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYEIR 84 (263)
T ss_pred eEEEeeeeeecCC---EEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHHHH
Confidence 5999999999953 4699999999999999999999999999999999999999999999999999988765 569
Q ss_pred hhceEEccccccccc-cHHHHhccCCC---cCCHHHHH----HHHHHcCchHH-HhhCCCCccccccCCCCCCChHHHHH
Q 048639 962 SQIGLVQQEPLLFSC-SIRNNICYGNE---AASEAEIV----EVSKKANIHDF-ISSLPDGYDTVVGEKGCQLSGGQKQR 1032 (1139)
Q Consensus 962 ~~i~~V~Qdp~LF~g-TIreNL~~~~~---~~sd~ei~----~al~~~~l~~~-i~~lp~gldt~v~e~G~~LSgGQrQr 1032 (1139)
+++|+++|..-||+. ||+||+.+.-. ..+++++. ..|+.|||..- .+..| +.||||.+.|
T Consensus 85 ~r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~P-----------sELSGGM~KR 153 (263)
T COG1127 85 KRMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLIRELVLMKLELVGLRGAAADLYP-----------SELSGGMRKR 153 (263)
T ss_pred hheeEEeeccccccccchhHhhheehHhhccCCHHHHHHHHHHHHHhcCCChhhhhhCc-----------hhhcchHHHH
Confidence 999999999999964 99999987432 33444443 45677888766 33344 5799999999
Q ss_pred HHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEE
Q 048639 1033 IAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVV 1111 (1139)
Q Consensus 1033 lalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~iv 1111 (1139)
+|||||+.-+|+||++|||||+|||-+...+-+.|+++.. .-+.|+++|||+++++.. ||||+++.+|+|+
T Consensus 154 vaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~--------~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~ 225 (263)
T COG1127 154 VALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELND--------ALGLTVIMVTHDLDSLLTIADRVAVLADGKVI 225 (263)
T ss_pred HHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHH--------hhCCEEEEEECChHHHHhhhceEEEEeCCEEE
Confidence 9999999999999999999999999999999999887751 234569999999999987 8999999999999
Q ss_pred EecChhHHhhccCChHHHHHH
Q 048639 1112 EMGSHSTLVAESQGVYSRLYQ 1132 (1139)
Q Consensus 1112 e~G~~~eLl~~~~g~f~~l~~ 1132 (1139)
..|+++|+.+..+.+.+++++
T Consensus 226 ~~Gt~~el~~sd~P~v~qf~~ 246 (263)
T COG1127 226 AEGTPEELLASDDPWVRQFFN 246 (263)
T ss_pred EeCCHHHHHhCCCHHHHHHhc
Confidence 999999999876666666654
No 153
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.2e-44 Score=362.40 Aligned_cols=224 Identities=34% Similarity=0.541 Sum_probs=194.1
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCC---hHHHh
Q 048639 885 RIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYN---LRRLR 961 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~---l~~lR 961 (1139)
.|+++||+.+||+ +..+|+||||+|++||.|||+|+||||||||++.|.|+.+|++|+|.++|.++..+. ++.+|
T Consensus 3 ~i~~~nl~k~yp~--~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~~r 80 (258)
T COG3638 3 MIEVKNLSKTYPG--GHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRKLR 80 (258)
T ss_pred eEEEeeeeeecCC--CceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHHHHH
Confidence 4899999999984 457999999999999999999999999999999999999999999999999999887 66788
Q ss_pred hhceEEcccccccc-ccHHHHhccCCC--------------cCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCC
Q 048639 962 SQIGLVQQEPLLFS-CSIRNNICYGNE--------------AASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLS 1026 (1139)
Q Consensus 962 ~~i~~V~Qdp~LF~-gTIreNL~~~~~--------------~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LS 1026 (1139)
++||+|+|++-|-. -|+.+|+..|.- ..+.....++|+++|+.+.... ...+||
T Consensus 81 ~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A~q-----------ra~~LS 149 (258)
T COG3638 81 RDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKAYQ-----------RASTLS 149 (258)
T ss_pred HhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHHHH-----------HhccCC
Confidence 99999999998874 589999976531 1234467889999999887543 235799
Q ss_pred hHHHHHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEE
Q 048639 1027 GGQKQRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVM 1105 (1139)
Q Consensus 1027 gGQrQrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl 1105 (1139)
|||+||++|||||..+|+|++-|||||+|||.+.+.|++.|++.. ..++.|||+.-|.++..+. ||||+-|
T Consensus 150 GGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in--------~~~g~Tvi~nLH~vdlA~~Y~~Riigl 221 (258)
T COG3638 150 GGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDIN--------QEDGITVIVNLHQVDLAKKYADRIIGL 221 (258)
T ss_pred cchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHH--------HHcCCEEEEEechHHHHHHHHhhheEe
Confidence 999999999999999999999999999999999999999999874 1344569999999999876 9999999
Q ss_pred eCCEEEEecChhHHhhccCChHHHHHH
Q 048639 1106 DKGEVVEMGSHSTLVAESQGVYSRLYQ 1132 (1139)
Q Consensus 1106 ~~G~ive~G~~~eLl~~~~g~f~~l~~ 1132 (1139)
++|+|+-.|++.||-+ ..+.+.+.
T Consensus 222 ~~G~ivfDg~~~el~~---~~~~~iYg 245 (258)
T COG3638 222 KAGRIVFDGPASELTD---EALDEIYG 245 (258)
T ss_pred cCCcEEEeCChhhhhH---HHHHHHhc
Confidence 9999999999999643 34444443
No 154
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-43 Score=397.36 Aligned_cols=223 Identities=26% Similarity=0.469 Sum_probs=189.7
Q ss_pred ccEEEEeEEEECCCCC--CCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCC------
Q 048639 255 GNIDIRDVCFAYPSRP--DQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDL------ 326 (1139)
Q Consensus 255 ~~i~~~~v~~~y~~~~--~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~------ 326 (1139)
..|+++|++|+|++.. +.++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|+++.+.
T Consensus 20 ~~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~~~ 99 (320)
T PRK13631 20 IILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNHEL 99 (320)
T ss_pred ceEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEcccccccccc
Confidence 4699999999997421 24699999999999999999999999999999999999999999999999988642
Q ss_pred ----------CHHHHhcceEEEecCC--CCCcccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhCCCCCC-ccccc
Q 048639 327 ----------DLKSLRKNIGAVSQEP--SLFTGSLMDNIKVGNM--DADDEQIYNASMMANAHSFISQLPDQYS-TELGQ 391 (1139)
Q Consensus 327 ----------~~~~~~~~i~~v~Q~~--~l~~~ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~i~~ 391 (1139)
+...+|++|+||+|+| ++|+.|++|||.++.. ..+.++..+ .+.+.++.+ |++ ...++
T Consensus 100 ~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~-----~~~~~l~~~--gL~~~~~~~ 172 (320)
T PRK13631 100 ITNPYSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVKKSEAKK-----LAKFYLNKM--GLDDSYLER 172 (320)
T ss_pred cccccccccchHHHHHhcEEEEEECchhccccchHHHHHHhhHHhcCCCHHHHHH-----HHHHHHHHc--CCChhHhcC
Confidence 3456788999999998 7899999999998742 223332211 223455665 554 45778
Q ss_pred cCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCCeEEEEecCccchh-ccCEEEEEeCc
Q 048639 392 RGVQLSGGQKQRIAIARAIVKNPPILLLDEATSALDSESEKLVQEALERAM-QGRTVILIAHRMSTIV-NADMIAVVEDG 469 (1139)
Q Consensus 392 ~g~~LSgGqkqRi~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~~~~~~-~~d~i~~l~~G 469 (1139)
.+.+||||||||++|||||+++|++|||||||++||+.+++.+.+.|.++. +++|+|+|||+++.+. .||+|++|++|
T Consensus 173 ~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~~~~~~adri~vl~~G 252 (320)
T PRK13631 173 SPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTMEHVLEVADEVIVMDKG 252 (320)
T ss_pred CcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECC
Confidence 899999999999999999999999999999999999999999999998764 5899999999999875 59999999999
Q ss_pred EEEEecChhhhhccc
Q 048639 470 QVTETGTHHSLLQTS 484 (1139)
Q Consensus 470 ~i~~~g~~~~l~~~~ 484 (1139)
++++.|+++++....
T Consensus 253 ~i~~~g~~~~~~~~~ 267 (320)
T PRK13631 253 KILKTGTPYEIFTDQ 267 (320)
T ss_pred EEEEeCCHHHHhcCH
Confidence 999999999987654
No 155
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.1e-44 Score=376.82 Aligned_cols=217 Identities=30% Similarity=0.494 Sum_probs=179.5
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCc---cCCCCCHHHHh
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSL---NIKDLDLKSLR 332 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~---~~~~~~~~~~~ 332 (1139)
+|.++|+++.|+. .++++|||++|+.||.+|+.|||||||||||++|+|+..|++|+|.+||. |.++.. .-.
T Consensus 2 ~i~i~~~~~~~~~---~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~~--~~~ 76 (345)
T COG1118 2 SIRINNVKKRFGA---FGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNLA--VRD 76 (345)
T ss_pred ceeehhhhhhccc---ccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhccc--hhh
Confidence 4789999999974 45999999999999999999999999999999999999999999999999 555533 334
Q ss_pred cceEEEecCCCCCc-ccHHHHHhcCCCC----CCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHH
Q 048639 333 KNIGAVSQEPSLFT-GSLMDNIKVGNMD----ADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIA 407 (1139)
Q Consensus 333 ~~i~~v~Q~~~l~~-~ti~~ni~~g~~~----~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lA 407 (1139)
++||+|+|+.-||. .||++||.||.+- .+..++ ...+.+.++-+ .++-.-...+.+||||||||||||
T Consensus 77 R~VGfvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~~~-----r~rv~elL~lv--qL~~la~ryP~QLSGGQrQRVALA 149 (345)
T COG1118 77 RKVGFVFQHYALFPHMTVADNIAFGLKVRKERPSEAEI-----RARVEELLRLV--QLEGLADRYPAQLSGGQRQRVALA 149 (345)
T ss_pred cceeEEEechhhcccchHHhhhhhcccccccCCChhhH-----HHHHHHHHHHh--cccchhhcCchhcChHHHHHHHHH
Confidence 68999999999996 5999999999631 111111 11222222222 122223456789999999999999
Q ss_pred HHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhccc
Q 048639 408 RAIVKNPPILLLDEATSALDSESEKLVQEALERAMQ--GRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQTS 484 (1139)
Q Consensus 408 Ral~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~ 484 (1139)
|||..+|++||||||+++||++.++.+...|+++.. |.|+++||||.+++.. ||||++|++|+|...|+++|+...+
T Consensus 150 RALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~p~ev~~~P 229 (345)
T COG1118 150 RALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQVGPPDEVYDHP 229 (345)
T ss_pred HHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeeeeeCCHHHHhcCC
Confidence 999999999999999999999999999999988753 8899999999999865 9999999999999999999997643
No 156
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=6.9e-44 Score=343.88 Aligned_cols=212 Identities=32% Similarity=0.544 Sum_probs=188.2
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhce
Q 048639 886 IEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQIG 965 (1139)
Q Consensus 886 I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~ 965 (1139)
|.+++|.|+|..-+ =.++++|++||++||+||||||||||++++.||..|.+|+|.|+|+|....++ .++-++
T Consensus 2 l~L~~V~~~y~~~~-----~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P--~~RPVS 74 (231)
T COG3840 2 LALDDVRFSYGHLP-----MRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPP--AERPVS 74 (231)
T ss_pred ccccceEEeeCcce-----EEEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCc--ccCChh
Confidence 57899999996432 24789999999999999999999999999999999999999999999988776 456799
Q ss_pred EEcccccccc-ccHHHHhccCCC------cCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 048639 966 LVQQEPLLFS-CSIRNNICYGNE------AASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIART 1038 (1139)
Q Consensus 966 ~V~Qdp~LF~-gTIreNL~~~~~------~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalARA 1038 (1139)
+++||..||. -||++|+.+|.. ....+.+..++.++|+.++..++|. .||||||||+||||+
T Consensus 75 mlFQEnNLFaHLtV~qNigLGl~P~LkL~a~~r~~v~~aa~~vGl~~~~~RLP~-----------~LSGGqRQRvALARc 143 (231)
T COG3840 75 MLFQENNLFAHLTVAQNIGLGLSPGLKLNAEQREKVEAAAAQVGLAGFLKRLPG-----------ELSGGQRQRVALARC 143 (231)
T ss_pred hhhhccccchhhhhhhhhcccCCcccccCHHHHHHHHHHHHHhChhhHhhhCcc-----------ccCchHHHHHHHHHH
Confidence 9999999996 599999998842 1235679999999999999999984 699999999999999
Q ss_pred hcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEEEecChh
Q 048639 1039 LLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVVEMGSHS 1117 (1139)
Q Consensus 1039 Llr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~ 1117 (1139)
|+|+-|||+||||.|+||+.-++.+...+.... ++++. |+++|||.++.+.. +||++++|+|+|++.|+-+
T Consensus 144 lvR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~-------~E~~~-TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~ 215 (231)
T COG3840 144 LVREQPILLLDEPFSALDPALRAEMLALVSQLC-------DERKM-TLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQ 215 (231)
T ss_pred HhccCCeEEecCchhhcCHHHHHHHHHHHHHHH-------HhhCC-EEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHH
Confidence 999999999999999999999999999988765 22344 59999999999887 9999999999999999999
Q ss_pred HHhhcc
Q 048639 1118 TLVAES 1123 (1139)
Q Consensus 1118 eLl~~~ 1123 (1139)
++++..
T Consensus 216 ~~~~~~ 221 (231)
T COG3840 216 ELLSGK 221 (231)
T ss_pred HHhccC
Confidence 999763
No 157
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-43 Score=397.88 Aligned_cols=219 Identities=27% Similarity=0.462 Sum_probs=184.0
Q ss_pred cEEEEeEEEECCCCC--CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCC-------
Q 048639 885 RIEFQNIKFNYPSRP--EVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEY------- 955 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~--~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~------- 955 (1139)
.|+++||+|+|++.. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||+++.+.
T Consensus 21 ~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~~~~ 100 (320)
T PRK13631 21 ILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNHELI 100 (320)
T ss_pred eEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEccccccccccc
Confidence 599999999997421 23699999999999999999999999999999999999999999999999998653
Q ss_pred ---------ChHHHhhhceEEcccc--ccccccHHHHhccCCC--cCCHHH----HHHHHHHcCchHHHhhCCCCccccc
Q 048639 956 ---------NLRRLRSQIGLVQQEP--LLFSCSIRNNICYGNE--AASEAE----IVEVSKKANIHDFISSLPDGYDTVV 1018 (1139)
Q Consensus 956 ---------~l~~lR~~i~~V~Qdp--~LF~gTIreNL~~~~~--~~sd~e----i~~al~~~~l~~~i~~lp~gldt~v 1018 (1139)
+...+|++++||+|+| .+|+.|+++|+.++.. ..++++ +.++++.+++.+ ...
T Consensus 101 ~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~----------~~~ 170 (320)
T PRK13631 101 TNPYSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVKKSEAKKLAKFYLNKMGLDD----------SYL 170 (320)
T ss_pred ccccccccchHHHHHhcEEEEEECchhccccchHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCCh----------hHh
Confidence 3567899999999998 6899999999987621 223333 334444444421 234
Q ss_pred cCCCCCCChHHHHHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhh-
Q 048639 1019 GEKGCQLSGGQKQRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVI- 1097 (1139)
Q Consensus 1019 ~e~G~~LSgGQrQrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~- 1097 (1139)
.+.+.+||||||||++|||||+++|+||||||||++||+.++..+.+.|++.. .+++|||+|||+++.+.
T Consensus 171 ~~~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~---------~~g~TiiivtHd~~~~~~ 241 (320)
T PRK13631 171 ERSPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAK---------ANNKTVFVITHTMEHVLE 241 (320)
T ss_pred cCCcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHH---------HCCCEEEEEecCHHHHHH
Confidence 55667899999999999999999999999999999999999999999998764 23456999999999885
Q ss_pred cCCEEEEEeCCEEEEecChhHHhhc
Q 048639 1098 NSDVIVVMDKGEVVEMGSHSTLVAE 1122 (1139)
Q Consensus 1098 ~~DrI~vl~~G~ive~G~~~eLl~~ 1122 (1139)
.||||+||++|++++.|+|+++.++
T Consensus 242 ~adri~vl~~G~i~~~g~~~~~~~~ 266 (320)
T PRK13631 242 VADEVIVMDKGKILKTGTPYEIFTD 266 (320)
T ss_pred hCCEEEEEECCEEEEeCCHHHHhcC
Confidence 5999999999999999999987643
No 158
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=3.3e-43 Score=379.51 Aligned_cols=219 Identities=43% Similarity=0.745 Sum_probs=198.4
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcce
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNI 335 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 335 (1139)
.++++|+++.|++. .+++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.+
T Consensus 2 ~l~~~~l~~~~~~~-~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 80 (220)
T cd03245 2 RIEFRNVSFSYPNQ-EIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRNI 80 (220)
T ss_pred eEEEEEEEEEcCCC-CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhhE
Confidence 58999999999642 24699999999999999999999999999999999999999999999999998777777778899
Q ss_pred EEEecCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHccCCC
Q 048639 336 GAVSQEPSLFTGSLMDNIKVGNMDADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVKNPP 415 (1139)
Q Consensus 336 ~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~~~~ 415 (1139)
+|++|+++++..|++||+.++.+....+++.+.++..++.+.+...|.|++|.+.+...+||||||||++||||++.+|+
T Consensus 81 ~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~~p~ 160 (220)
T cd03245 81 GYVPQDVTLFYGTLRDNITLGAPLADDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLNDPP 160 (220)
T ss_pred EEeCCCCccccchHHHHhhcCCCCCCHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhcCCC
Confidence 99999999998899999988754445556677777778888889999999999999999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhccCEEEEEeCcEEEEec
Q 048639 416 ILLLDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVNADMIAVVEDGQVTETG 475 (1139)
Q Consensus 416 illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g 475 (1139)
++||||||++||+.+...+.+.|+++.+++|+|++||+++.+..||++++|++|++++.|
T Consensus 161 llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~d~v~~l~~g~i~~~~ 220 (220)
T cd03245 161 ILLLDEPTSAMDMNSEERLKERLRQLLGDKTLIIITHRPSLLDLVDRIIVMDSGRIVADG 220 (220)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEeCCeEeecC
Confidence 999999999999999999999999886668999999999988679999999999998654
No 159
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-43 Score=372.91 Aligned_cols=218 Identities=30% Similarity=0.541 Sum_probs=188.6
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhc
Q 048639 885 RIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQI 964 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i 964 (1139)
.|+++|++++|.++ +||+||||+|++||.+||+||||||||||+++++|+.+|++|+|.++|.+++.... +.+|
T Consensus 4 ~i~v~nl~v~y~~~---~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~---~~~I 77 (254)
T COG1121 4 MIEVENLTVSYGNR---PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRK---RLRI 77 (254)
T ss_pred EEEEeeeEEEECCE---eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEcccccccccc---CCeE
Confidence 49999999999643 59999999999999999999999999999999999999999999999998776432 5789
Q ss_pred eEEcccc---ccccccHHHHhccCCCc----------CCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHH
Q 048639 965 GLVQQEP---LLFSCSIRNNICYGNEA----------ASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQ 1031 (1139)
Q Consensus 965 ~~V~Qdp---~LF~gTIreNL~~~~~~----------~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQ 1031 (1139)
|||||.. .-|+-||+|=+.+|... .+.+++.+||+++|+.++.++ ++| .|||||+|
T Consensus 78 gYVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~~~~r-------~i~----~LSGGQ~Q 146 (254)
T COG1121 78 GYVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMEDLRDR-------QIG----ELSGGQKQ 146 (254)
T ss_pred EEcCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchhhhCC-------ccc----ccCcHHHH
Confidence 9999965 35788999999887321 134789999999999988643 455 49999999
Q ss_pred HHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEE
Q 048639 1032 RIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEV 1110 (1139)
Q Consensus 1032 rlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~i 1110 (1139)
|+.|||||+++|++|+|||||+++|+.++..+.+.|+++. .+++||++|+|+++.+.. ||+|+.| |+++
T Consensus 147 RV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~---------~eg~tIl~vtHDL~~v~~~~D~vi~L-n~~~ 216 (254)
T COG1121 147 RVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELR---------QEGKTVLMVTHDLGLVMAYFDRVICL-NRHL 216 (254)
T ss_pred HHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHH---------HCCCEEEEEeCCcHHhHhhCCEEEEE-cCee
Confidence 9999999999999999999999999999999999999886 334569999999999987 9999999 5788
Q ss_pred EEecChhHHhhccCChHHHHH
Q 048639 1111 VEMGSHSTLVAESQGVYSRLY 1131 (1139)
Q Consensus 1111 ve~G~~~eLl~~~~g~f~~l~ 1131 (1139)
...|+|++.+.. ..+.+.+
T Consensus 217 ~~~G~~~~~~~~--~~l~~~~ 235 (254)
T COG1121 217 IASGPPEEVLTE--ENLEKAF 235 (254)
T ss_pred EeccChhhccCH--HHHHHHh
Confidence 999999999864 3444444
No 160
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=1.3e-43 Score=384.44 Aligned_cols=212 Identities=36% Similarity=0.576 Sum_probs=185.9
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccc-----cCCccEEEECCcccCCCC--hH
Q 048639 886 IEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFY-----DPNEGIILIDGKGIKEYN--LR 958 (1139)
Q Consensus 886 I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~-----~p~~G~I~idG~di~~~~--l~ 958 (1139)
|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|++ +|++|+|.++|.++...+ ..
T Consensus 1 i~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 77 (227)
T cd03260 1 IELRDLNVYYGD---KHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVL 77 (227)
T ss_pred CEEEEEEEEcCC---ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHHH
Confidence 578999999964 36999999999999999999999999999999999999 999999999999998776 56
Q ss_pred HHhhhceEEccccccccccHHHHhccCCCc---C----CHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHH
Q 048639 959 RLRSQIGLVQQEPLLFSCSIRNNICYGNEA---A----SEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQ 1031 (1139)
Q Consensus 959 ~lR~~i~~V~Qdp~LF~gTIreNL~~~~~~---~----sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQ 1031 (1139)
.+|++++|+||++.+|..|++||+.++... . .++++.++++..++.+...+.++ +.+|||||||
T Consensus 78 ~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~---------~~~LSgG~~q 148 (227)
T cd03260 78 ELRRRVGMVFQKPNPFPGSIYDNVAYGLRLHGIKLKEELDERVEEALRKAALWDEVKDRLH---------ALGLSGGQQQ 148 (227)
T ss_pred HHHhhEEEEecCchhccccHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCChHHhccCC---------cccCCHHHHH
Confidence 788999999999999988999999864211 1 23567888888888766544321 3579999999
Q ss_pred HHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEE
Q 048639 1032 RIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEV 1110 (1139)
Q Consensus 1032 rlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~i 1110 (1139)
|++|||||+++|++|||||||++||+++.+.+.+.|++.. .+ +|+|++||+++.+.. ||+|++|++|++
T Consensus 149 rv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~---------~~-~tii~~sH~~~~~~~~~d~i~~l~~G~i 218 (227)
T cd03260 149 RLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELK---------KE-YTIVIVTHNMQQAARVADRTAFLLNGRL 218 (227)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh---------hC-cEEEEEeccHHHHHHhCCEEEEEeCCEE
Confidence 9999999999999999999999999999999999999875 34 569999999999876 999999999999
Q ss_pred EEecChhHH
Q 048639 1111 VEMGSHSTL 1119 (1139)
Q Consensus 1111 ve~G~~~eL 1119 (1139)
++.|+++++
T Consensus 219 ~~~g~~~~~ 227 (227)
T cd03260 219 VEFGPTEQI 227 (227)
T ss_pred EEecCcccC
Confidence 999998764
No 161
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.8e-43 Score=385.23 Aligned_cols=219 Identities=31% Similarity=0.504 Sum_probs=187.2
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCCh---HHHhh
Q 048639 886 IEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNL---RRLRS 962 (1139)
Q Consensus 886 I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l---~~lR~ 962 (1139)
|+++|++++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+. ..+|+
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~ 77 (235)
T cd03261 1 IELRGLTKSFGG---RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLRR 77 (235)
T ss_pred CeEEEEEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHhc
Confidence 578999999963 369999999999999999999999999999999999999999999999999987764 56788
Q ss_pred hceEEccccccccc-cHHHHhccCCC---cCC----HHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHH
Q 048639 963 QIGLVQQEPLLFSC-SIRNNICYGNE---AAS----EAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIA 1034 (1139)
Q Consensus 963 ~i~~V~Qdp~LF~g-TIreNL~~~~~---~~s----d~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrla 1034 (1139)
+++||||++.+|.. |+++|+.++.. ..+ ++++.++++..++.++..+. ..+||||||||++
T Consensus 78 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LSgG~~qrv~ 146 (235)
T cd03261 78 RMGMLFQSGALFDSLTVFENVAFPLREHTRLSEEEIREIVLEKLEAVGLRGAEDLY-----------PAELSGGMKKRVA 146 (235)
T ss_pred ceEEEccCcccCCCCcHHHHHHHHHhhccCCCHHHHHHHHHHHHHHcCCchhhcCC-----------hhhCCHHHHHHHH
Confidence 99999999999986 99999986421 122 23466778888876554332 2479999999999
Q ss_pred HHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEEEe
Q 048639 1035 IARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVVEM 1113 (1139)
Q Consensus 1035 lARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ive~ 1113 (1139)
|||||+++|+||||||||++||+.+.+.+.+.|++... ..++|||+|||+++.+.. ||||++|++|++++.
T Consensus 147 ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--------~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~ 218 (235)
T cd03261 147 LARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKK--------ELGLTSIMVTHDLDTAFAIADRIAVLYDGKIVAE 218 (235)
T ss_pred HHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHH--------hcCcEEEEEecCHHHHHHhcCEEEEEECCeEEEe
Confidence 99999999999999999999999999999999997640 124569999999999876 999999999999999
Q ss_pred cChhHHhhccCChH
Q 048639 1114 GSHSTLVAESQGVY 1127 (1139)
Q Consensus 1114 G~~~eLl~~~~g~f 1127 (1139)
|+++++.+. ...|
T Consensus 219 g~~~~~~~~-~~~~ 231 (235)
T cd03261 219 GTPEELRAS-DDPL 231 (235)
T ss_pred cCHHHHcCC-CChh
Confidence 999999864 3444
No 162
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=3.1e-43 Score=365.10 Aligned_cols=208 Identities=34% Similarity=0.532 Sum_probs=177.1
Q ss_pred EEEEeEEEECCCCCC-cccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChH---HHh
Q 048639 886 IEFQNIKFNYPSRPE-VTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLR---RLR 961 (1139)
Q Consensus 886 I~~~nvsf~Y~~~~~-~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~---~lR 961 (1139)
++++||+..|..... .++|+++||+|++||.|||+||||||||||+++|.++-.|++|.|.++|.|+..++-+ .+|
T Consensus 2 i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~R 81 (226)
T COG1136 2 IELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKLR 81 (226)
T ss_pred cEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHHH
Confidence 679999999964322 3699999999999999999999999999999999999999999999999999999854 344
Q ss_pred -hhceEEcccccccc-ccHHHHhccC----CCc--CCHHHHHHHHHHcCchHHHh-hCCCCccccccCCCCCCChHHHHH
Q 048639 962 -SQIGLVQQEPLLFS-CSIRNNICYG----NEA--ASEAEIVEVSKKANIHDFIS-SLPDGYDTVVGEKGCQLSGGQKQR 1032 (1139)
Q Consensus 962 -~~i~~V~Qdp~LF~-gTIreNL~~~----~~~--~sd~ei~~al~~~~l~~~i~-~lp~gldt~v~e~G~~LSgGQrQr 1032 (1139)
++||+|+|+..|++ -|++||+.+. ... ..++.+.+.++.+|+.+... ..| .+||||||||
T Consensus 82 ~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~~~~~~~~~l~~~lgl~~~~~~~~p-----------~eLSGGqqQR 150 (226)
T COG1136 82 RKKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAGRRKRAAEELLEVLGLEDRLLKKKP-----------SELSGGQQQR 150 (226)
T ss_pred HHhEEEECccCCCCCCCCHHHHHHhHHHHcCCChhHHHHHHHHHHHhcCChhhhccCCc-----------hhcCHHHHHH
Confidence 67999999998875 5999999842 111 12456777788888876554 333 5799999999
Q ss_pred HHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhcCCEEEEEeCCEEEE
Q 048639 1033 IAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVINSDVIVVMDKGEVVE 1112 (1139)
Q Consensus 1033 lalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~~DrI~vl~~G~ive 1112 (1139)
+||||||+.+|+|++.||||++||.+|.+.|.+.+++... ..++|+|+|||+......|||++.|.+|++.+
T Consensus 151 VAIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~--------~~g~tii~VTHd~~lA~~~dr~i~l~dG~~~~ 222 (226)
T COG1136 151 VAIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNK--------ERGKTIIMVTHDPELAKYADRVIELKDGKIEE 222 (226)
T ss_pred HHHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHH--------hcCCEEEEEcCCHHHHHhCCEEEEEeCCeeee
Confidence 9999999999999999999999999999999999998741 33566999999999999999999999999543
No 163
>COG4178 ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]
Probab=100.00 E-value=9e-40 Score=379.90 Aligned_cols=473 Identities=20% Similarity=0.213 Sum_probs=355.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccCC---CChhHHHHHHHhcHHHHHHHHHH
Q 048639 606 YSLAFSLVGLFSLFTHTLQHYFFGVVGEKAMTNLRRTLYTGVLRNEIAWFEKPQ---NDAGSLTSRIVSDTSMVKAIISD 682 (1139)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~~~~ff~~~~---~~~G~i~~r~~~D~~~i~~~~~~ 682 (1139)
.+.+|.+++.+.+.....+.|+-.....++-..|-+.+.++.+...-.|+.... +.+-..=.|+.+|+...-+....
T Consensus 88 ~l~~f~~ia~~~v~~~v~~~~L~~~l~~~wR~wLt~~l~~~wl~~~~~y~l~~~~~~~~~dNpDQRi~eDi~~~t~~t~~ 167 (604)
T COG4178 88 QLQVFAIIAGLLVLLNVAQTWLNQMLRLRWREWLTKDLLDRWLDPRRYYRLAQAGGIGLIDNPDQRIQEDIRNFTETTLD 167 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhcccccCCCChHHhHHHHHHHHHhhHHH
Confidence 456677777777788888888888888888888888888888876644443211 11112346889998888776666
Q ss_pred HHHHHHHHHHHHHHHHHHHH---------------HHhHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHHH
Q 048639 683 RMSVIVQCISSILIATIVSL---------------VVDWRMALVAWAVMPCHFIGGLIQAKSAQGFSGDSAAAHTEFISL 747 (1139)
Q Consensus 683 ~l~~~~~~~~~~~~~~~~~~---------------~~~~~l~lv~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 747 (1139)
....++..+++++...++.. .+...+.+++++.+++.-++..+..+.+.++.-+..+.++.+...
T Consensus 168 l~~g~l~s~islisF~~iLw~lsg~~~~~~~g~~~~I~g~mv~~~i~Ya~~~s~~~~~iGr~Li~LN~~~~~~EA~fR~~ 247 (604)
T COG4178 168 LSFGLLQSVISLISFTGILWSLSGGLAFTIGGFSFGIPGYMVWAVIIYAISASLLTHLIGRPLIRLNFERQKLEADFRYS 247 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHccCcceEeecccccccchHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHH
Confidence 66666666666655544443 222333344444444444445566666667777777888888888
Q ss_pred HHHhhcchHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHH
Q 048639 748 TSESASNIRTVASFCHEENILQKAKISLEKTKRSSRKESIKYGVIQGFSLCLWNIAHAVALWYTAVLIDKKQATFRDGIR 827 (1139)
Q Consensus 748 ~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 827 (1139)
+.-..++.+.|..|+.|+...++.....+.......+...+.....++......+..++-...++.....|.+++|+++.
T Consensus 248 Lvrv~enaE~IAly~GE~~Er~~l~~~f~~v~~n~~~l~~~~~~l~~~~~gy~~~s~v~P~li~ap~~f~g~i~~G~lmq 327 (604)
T COG4178 248 LVRVRENAEAIALYRGEKVERRRLDDRFDAVLGNWRRLVRAQIRLTWFQLGYGWLSVVLPILIAAPRYFSGQITFGGLMQ 327 (604)
T ss_pred HHHHHhhHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhHHHHHHHHHhccHhhhcCcChHHHHHH
Confidence 88888999999999999988888777776666654444444433444444444444445555666667899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC--CCCCCCCCCCC--C---CCccccEEEEeEEEECCCCCC
Q 048639 828 AYQIFSLTVPSITELWTLIPTVISAITVLAPAFEILDRKT--EIEPDAPESSE--S---GRIKGRIEFQNIKFNYPSRPE 900 (1139)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~--~~~~~~~~~~~--~---~~~~g~I~~~nvsf~Y~~~~~ 900 (1139)
+...+.....+++.+...++.+..-.+...|+.++..... +.+...+.... . ......|+|+|++..-|+.
T Consensus 328 a~~aF~~v~sslswfi~~~~~ia~~rA~~~Rl~~f~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nl~l~~p~~-- 405 (604)
T COG4178 328 AVGAFGQVHSSLSWFIDNYDAIADWRATLLRLAEFRQALEAAQMDTEKPARTGRRIDFDDNADHGITLENLSLRTPDG-- 405 (604)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccCcccccCcccccccccccccceeEEeeeeEECCCC--
Confidence 9999999999999999999999999999999988764221 10111010000 0 0013679999999998753
Q ss_pred cccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhceEEccccccccccHHH
Q 048639 901 VTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQIGLVQQEPLLFSCSIRN 980 (1139)
Q Consensus 901 ~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~~V~Qdp~LF~gTIre 980 (1139)
.+.|+++||+|+|||.+-|.|+||||||||+++|.|+++-.+|+|..-. -..+-|+||.|.+-.||+||
T Consensus 406 ~~ll~~l~~~v~~G~~llI~G~SG~GKTsLlRaiaGLWP~g~G~I~~P~-----------~~~~lflpQ~PY~p~GtLre 474 (604)
T COG4178 406 QTLLSELNFEVRPGERLLITGESGAGKTSLLRALAGLWPWGSGRISMPA-----------DSALLFLPQRPYLPQGTLRE 474 (604)
T ss_pred CeeeccceeeeCCCCEEEEECCCCCCHHHHHHHHhccCccCCCceecCC-----------CCceEEecCCCCCCCccHHH
Confidence 4789999999999999999999999999999999999999999986641 12478999999999999999
Q ss_pred HhccCCCc--CCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhcCCCCEEEeeccccCCCHH
Q 048639 981 NICYGNEA--ASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIARTLLKRPAIMLLDEATSALDAE 1058 (1139)
Q Consensus 981 NL~~~~~~--~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalARALlr~p~ILlLDEaTS~LD~~ 1058 (1139)
=|+|.+.. .+|+++.++|.+|+|.++++++.+ .+. =..-||+||||||++||.||++|++++||||||+||++
T Consensus 475 ~l~YP~~~~~~~d~~l~~vL~~vgL~~L~~rl~~-~~~----W~~vLS~GEqQRlafARilL~kP~~v~LDEATsALDe~ 549 (604)
T COG4178 475 ALCYPNAAPDFSDAELVAVLHKVGLGDLAERLDE-EDR----WDRVLSGGEQQRLAFARLLLHKPKWVFLDEATSALDEE 549 (604)
T ss_pred HHhCCCCCCCCChHHHHHHHHHcCcHHHHHHHhc-cCc----HhhhcChhHHHHHHHHHHHHcCCCEEEEecchhccChH
Confidence 99997653 899999999999999999998743 222 34569999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhcCCEEEEEe
Q 048639 1059 SERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVINSDVIVVMD 1106 (1139)
Q Consensus 1059 te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~~DrI~vl~ 1106 (1139)
+|..+.+.+++.. .+. |+|.|+||.......++.+-++
T Consensus 550 ~e~~l~q~l~~~l---------p~~-tvISV~Hr~tl~~~h~~~l~l~ 587 (604)
T COG4178 550 TEDRLYQLLKEEL---------PDA-TVISVGHRPTLWNFHSRQLELL 587 (604)
T ss_pred HHHHHHHHHHhhC---------CCC-EEEEeccchhhHHHHhhheeec
Confidence 9999999999754 344 5999999988777777766554
No 164
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.1e-43 Score=382.39 Aligned_cols=217 Identities=30% Similarity=0.531 Sum_probs=184.1
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCH---HHHhc
Q 048639 257 IDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDL---KSLRK 333 (1139)
Q Consensus 257 i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~---~~~~~ 333 (1139)
|+++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. ..+++
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~ 77 (235)
T cd03261 1 IELRGLTKSFGG---RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLRR 77 (235)
T ss_pred CeEEEEEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHhc
Confidence 468999999963 469999999999999999999999999999999999999999999999999877654 56788
Q ss_pred ceEEEecCCCCCcc-cHHHHHhcCCC---CCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHH
Q 048639 334 NIGAVSQEPSLFTG-SLMDNIKVGNM---DADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARA 409 (1139)
Q Consensus 334 ~i~~v~Q~~~l~~~-ti~~ni~~g~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARa 409 (1139)
.|+||+|++.+|+. |++||+.++.. ..+.++..+ .+.+.++.+ |+.........+||||||||++||||
T Consensus 78 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~ia~a 150 (235)
T cd03261 78 RMGMLFQSGALFDSLTVFENVAFPLREHTRLSEEEIRE-----IVLEKLEAV--GLRGAEDLYPAELSGGMKKRVALARA 150 (235)
T ss_pred ceEEEccCcccCCCCcHHHHHHHHHhhccCCCHHHHHH-----HHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHH
Confidence 99999999999886 99999987632 122222221 122334444 44445566778999999999999999
Q ss_pred HccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhcc
Q 048639 410 IVKNPPILLLDEATSALDSESEKLVQEALERAMQ--GRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQT 483 (1139)
Q Consensus 410 l~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 483 (1139)
|+.+|+++||||||++||+.++..+.+.|+++.+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 151 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 227 (235)
T cd03261 151 LALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIVAEGTPEELRAS 227 (235)
T ss_pred HhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEEEecCHHHHcCC
Confidence 9999999999999999999999999999988753 7899999999999876 999999999999999999888654
No 165
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=5e-43 Score=379.55 Aligned_cols=219 Identities=49% Similarity=0.787 Sum_probs=195.8
Q ss_pred CCccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHh
Q 048639 253 IDGNIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLR 332 (1139)
Q Consensus 253 ~~~~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~ 332 (1139)
..+.++++|++++|+++.+.++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...++
T Consensus 8 ~~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~ 87 (226)
T cd03248 8 LKGIVKFQNVTFAYPTRPDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHKYLH 87 (226)
T ss_pred cCceEEEEEEEEEeCCCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHHHHH
Confidence 34679999999999753234699999999999999999999999999999999999999999999999998777777778
Q ss_pred cceEEEecCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHcc
Q 048639 333 KNIGAVSQEPSLFTGSLMDNIKVGNMDADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVK 412 (1139)
Q Consensus 333 ~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~ 412 (1139)
+.++|++|++.+|+.|++||+.++.......++.+......+.++++.+|.|+++.+.+++.+||||||||++|||||++
T Consensus 88 ~~i~~~~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~~~~LSgG~~qrv~laral~~ 167 (226)
T cd03248 88 SKVSLVGQEPVLFARSLQDNIAYGLQSCSFECVKEAAQKAHAHSFISELASGYDTEVGEKGSQLSGGQKQRVAIARALIR 167 (226)
T ss_pred hhEEEEecccHHHhhhHHHHhccccCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhc
Confidence 89999999999999999999998754444444445555566778899999899988999999999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhccCEEEEEeCcEE
Q 048639 413 NPPILLLDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVNADMIAVVEDGQV 471 (1139)
Q Consensus 413 ~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i 471 (1139)
+|+++||||||++||+.+...+.+.++++.+++|+|++||+++.+..||+|++|++|++
T Consensus 168 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~i 226 (226)
T cd03248 168 NPQVLILDEATSALDAESEQQVQQALYDWPERRTVLVIAHRLSTVERADQILVLDGGRI 226 (226)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEECCHHHHHhCCEEEEecCCcC
Confidence 99999999999999999999999999988777899999999999977999999999974
No 166
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.3e-43 Score=390.58 Aligned_cols=219 Identities=32% Similarity=0.559 Sum_probs=191.9
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhc
Q 048639 885 RIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQI 964 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i 964 (1139)
.|+++||+++|++....++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13650 4 IIEVKNLTFKYKEDQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHKI 83 (279)
T ss_pred eEEEEeEEEEcCCCCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhhc
Confidence 38999999999642224599999999999999999999999999999999999999999999999999888888899999
Q ss_pred eEEcccc--ccccccHHHHhccCCC--cCC----HHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHH
Q 048639 965 GLVQQEP--LLFSCSIRNNICYGNE--AAS----EAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIA 1036 (1139)
Q Consensus 965 ~~V~Qdp--~LF~gTIreNL~~~~~--~~s----d~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalA 1036 (1139)
+||+|+| .++..|+++||.++.. ..+ ++++.++++.+++.++.+..| .+||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LSgGq~qrv~lA 152 (279)
T PRK13650 84 GMVFQNPDNQFVGATVEDDVAFGLENKGIPHEEMKERVNEALELVGMQDFKEREP-----------ARLSGGQKQRVAIA 152 (279)
T ss_pred eEEEcChHHhcccccHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCCHhHhhCCc-----------ccCCHHHHHHHHHH
Confidence 9999998 4667899999987521 122 356788899999987765543 47999999999999
Q ss_pred HHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhcCCEEEEEeCCEEEEecCh
Q 048639 1037 RTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVINSDVIVVMDKGEVVEMGSH 1116 (1139)
Q Consensus 1037 RALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~~DrI~vl~~G~ive~G~~ 1116 (1139)
|||+++|+||||||||++||+.+.+.+.+.|++... ..++|+|+|||+++.+..||||++|++|++++.|++
T Consensus 153 ral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~--------~~g~tilivtH~~~~~~~~dri~~l~~G~i~~~g~~ 224 (279)
T PRK13650 153 GAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRD--------DYQMTVISITHDLDEVALSDRVLVMKNGQVESTSTP 224 (279)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHH--------hcCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCH
Confidence 999999999999999999999999999999987641 224569999999999978999999999999999999
Q ss_pred hHHhhc
Q 048639 1117 STLVAE 1122 (1139)
Q Consensus 1117 ~eLl~~ 1122 (1139)
+++.++
T Consensus 225 ~~~~~~ 230 (279)
T PRK13650 225 RELFSR 230 (279)
T ss_pred HHHHcC
Confidence 998764
No 167
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=6e-43 Score=378.95 Aligned_cols=219 Identities=52% Similarity=0.845 Sum_probs=198.1
Q ss_pred ccccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHh
Q 048639 882 IKGRIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLR 961 (1139)
Q Consensus 882 ~~g~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR 961 (1139)
..|.|+++|++++|+++...++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+...+|
T Consensus 8 ~~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~ 87 (226)
T cd03248 8 LKGIVKFQNVTFAYPTRPDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHKYLH 87 (226)
T ss_pred cCceEEEEEEEEEeCCCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHHHHH
Confidence 45789999999999753234699999999999999999999999999999999999999999999999999888877888
Q ss_pred hhceEEccccccccccHHHHhccCCCcCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhcC
Q 048639 962 SQIGLVQQEPLLFSCSIRNNICYGNEAASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIARTLLK 1041 (1139)
Q Consensus 962 ~~i~~V~Qdp~LF~gTIreNL~~~~~~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalARALlr 1041 (1139)
++++|+||+|.+|++|+++|+.++.......++++..+..++++++..+|.|+++.+.+...+||||||||++|||||++
T Consensus 88 ~~i~~~~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~~~~LSgG~~qrv~laral~~ 167 (226)
T cd03248 88 SKVSLVGQEPVLFARSLQDNIAYGLQSCSFECVKEAAQKAHAHSFISELASGYDTEVGEKGSQLSGGQKQRVAIARALIR 167 (226)
T ss_pred hhEEEEecccHHHhhhHHHHhccccCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhc
Confidence 99999999999999999999997654444556667777788899999999899998999999999999999999999999
Q ss_pred CCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhcCCEEEEEeCCEE
Q 048639 1042 RPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVINSDVIVVMDKGEV 1110 (1139)
Q Consensus 1042 ~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~~DrI~vl~~G~i 1110 (1139)
+|++|||||||++||+++.+.+.+.|++.. .+ +|+|+|||+++.+..||+|++|++|++
T Consensus 168 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~---------~~-~tii~~sh~~~~~~~~d~i~~l~~g~i 226 (226)
T cd03248 168 NPQVLILDEATSALDAESEQQVQQALYDWP---------ER-RTVLVIAHRLSTVERADQILVLDGGRI 226 (226)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHc---------CC-CEEEEEECCHHHHHhCCEEEEecCCcC
Confidence 999999999999999999999999999764 33 569999999999988999999999974
No 168
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.3e-43 Score=363.72 Aligned_cols=199 Identities=34% Similarity=0.560 Sum_probs=176.2
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhc
Q 048639 885 RIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQI 964 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i 964 (1139)
.+++++|+.+|+. ..||+|+||+|++||.|+|+||||||||||++++.|+.+|++|+|.++|.++... ...+
T Consensus 3 ~l~i~~v~~~f~~---~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p-----~~~~ 74 (248)
T COG1116 3 LLEIEGVSKSFGG---VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGP-----GPDI 74 (248)
T ss_pred eEEEEeeEEEeCc---eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCC-----CCCE
Confidence 4889999999964 5799999999999999999999999999999999999999999999999988543 4579
Q ss_pred eEEcccccccc-ccHHHHhccCCCcC------CHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHH
Q 048639 965 GLVQQEPLLFS-CSIRNNICYGNEAA------SEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIAR 1037 (1139)
Q Consensus 965 ~~V~Qdp~LF~-gTIreNL~~~~~~~------sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalAR 1037 (1139)
+||+|++.||+ -|+++|+.++.... ..+.+.+.++.+||.+|-+..| .+||||||||+||||
T Consensus 75 ~~vFQ~~~LlPW~Tv~~NV~l~l~~~~~~~~e~~~~a~~~L~~VgL~~~~~~~P-----------~qLSGGMrQRVaiAR 143 (248)
T COG1116 75 GYVFQEDALLPWLTVLDNVALGLELRGKSKAEARERAKELLELVGLAGFEDKYP-----------HQLSGGMRQRVAIAR 143 (248)
T ss_pred EEEeccCcccchhhHHhhheehhhccccchHhHHHHHHHHHHHcCCcchhhcCc-----------cccChHHHHHHHHHH
Confidence 99999999998 59999999875321 2456889999999999988777 479999999999999
Q ss_pred HhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeC--CEE
Q 048639 1038 TLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDK--GEV 1110 (1139)
Q Consensus 1038 ALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~--G~i 1110 (1139)
||+.+|+||+||||.+|||+.|...+|+-+.+.. + ..++||++|||+++.... +|||+||.+ |+|
T Consensus 144 AL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw-------~-~~~~TvllVTHdi~EAv~LsdRivvl~~~P~~i 211 (248)
T COG1116 144 ALATRPKLLLLDEPFGALDALTREELQDELLRLW-------E-ETRKTVLLVTHDVDEAVYLADRVVVLSNRPGRI 211 (248)
T ss_pred HHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHH-------H-hhCCEEEEEeCCHHHHHhhhCEEEEecCCCcce
Confidence 9999999999999999999999999999998764 1 334569999999998776 999999999 545
No 169
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.9e-43 Score=380.25 Aligned_cols=225 Identities=34% Similarity=0.569 Sum_probs=193.8
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhc
Q 048639 885 RIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQI 964 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i 964 (1139)
.|+++|++++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+...+|+.+
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 79 (241)
T PRK14250 3 EIEFKEVSYSSFG---KEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRKI 79 (241)
T ss_pred eEEEEeEEEEeCC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhcE
Confidence 4899999999963 3599999999999999999999999999999999999999999999999999888888889999
Q ss_pred eEEccccccccccHHHHhccCCC--cCCHHHHHHHHHHcCch-HHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhcC
Q 048639 965 GLVQQEPLLFSCSIRNNICYGNE--AASEAEIVEVSKKANIH-DFISSLPDGYDTVVGEKGCQLSGGQKQRIAIARTLLK 1041 (1139)
Q Consensus 965 ~~V~Qdp~LF~gTIreNL~~~~~--~~sd~ei~~al~~~~l~-~~i~~lp~gldt~v~e~G~~LSgGQrQrlalARALlr 1041 (1139)
+|+||+|.+|+.|+++|+.++.. ...++++.+.++..++. ++.. .....||||||||++||||+++
T Consensus 80 ~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~~LS~G~~qrl~la~al~~ 148 (241)
T PRK14250 80 GMVFQQPHLFEGTVKDNIEYGPMLKGEKNVDVEYYLSIVGLNKEYAT-----------RDVKNLSGGEAQRVSIARTLAN 148 (241)
T ss_pred EEEecCchhchhhHHHHHhcchhhcCcHHHHHHHHHHHcCCCHHHhh-----------CCcccCCHHHHHHHHHHHHHhc
Confidence 99999999999999999986532 12245677778887774 3322 2345799999999999999999
Q ss_pred CCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEEEecChhHHh
Q 048639 1042 RPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVVEMGSHSTLV 1120 (1139)
Q Consensus 1042 ~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eLl 1120 (1139)
+|++|||||||++||+++.+.+.+.|++... ..++|+|++||+++.+.. ||+|++|++|++++.|++++++
T Consensus 149 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--------~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 220 (241)
T PRK14250 149 NPEVLLLDEPTSALDPTSTEIIEELIVKLKN--------KMNLTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKTYDFF 220 (241)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHH--------hCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCHHHHh
Confidence 9999999999999999999999999987640 124569999999999876 9999999999999999999998
Q ss_pred hccCChHHHHH
Q 048639 1121 AESQGVYSRLY 1131 (1139)
Q Consensus 1121 ~~~~g~f~~l~ 1131 (1139)
..+...|.+.+
T Consensus 221 ~~~~~~~~~~~ 231 (241)
T PRK14250 221 TNPQNEVTKLF 231 (241)
T ss_pred cCCCcHHHHHH
Confidence 76444565544
No 170
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.8e-43 Score=399.33 Aligned_cols=221 Identities=28% Similarity=0.508 Sum_probs=193.3
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhc
Q 048639 885 RIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQI 964 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i 964 (1139)
.|+++||+++|+. +.++|+|+||+|++||.++|+||||||||||+++|.|+.+|++|+|.+||.++..++.. ++++
T Consensus 3 ~l~i~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 78 (356)
T PRK11650 3 GLKLQAVRKSYDG--KTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPA--DRDI 78 (356)
T ss_pred EEEEEeEEEEeCC--CCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 3899999999942 24699999999999999999999999999999999999999999999999999887754 4789
Q ss_pred eEEcccccccc-ccHHHHhccCCC--cCC----HHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHH
Q 048639 965 GLVQQEPLLFS-CSIRNNICYGNE--AAS----EAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIAR 1037 (1139)
Q Consensus 965 ~~V~Qdp~LF~-gTIreNL~~~~~--~~s----d~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalAR 1037 (1139)
+||||++.+|. .|+++|+.++.. ..+ ++++.++++.+++.++.++.| .+||||||||+||||
T Consensus 79 g~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LSgGq~QRvalAR 147 (356)
T PRK11650 79 AMVFQNYALYPHMSVRENMAYGLKIRGMPKAEIEERVAEAARILELEPLLDRKP-----------RELSGGQRQRVAMGR 147 (356)
T ss_pred EEEeCCccccCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhHhhCCh-----------hhCCHHHHHHHHHHH
Confidence 99999999996 599999987632 112 346788899999988776655 479999999999999
Q ss_pred HhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEEEecCh
Q 048639 1038 TLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVVEMGSH 1116 (1139)
Q Consensus 1038 ALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~ 1116 (1139)
||+++|+|||||||||+||+.+.+.+.+.|++... ..++|+|+|||+++.+.. ||+|++|++|++++.|+|
T Consensus 148 AL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~--------~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~ 219 (356)
T PRK11650 148 AIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHR--------RLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTP 219 (356)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH--------hcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCH
Confidence 99999999999999999999999999999987641 224569999999998875 999999999999999999
Q ss_pred hHHhhccCChHH
Q 048639 1117 STLVAESQGVYS 1128 (1139)
Q Consensus 1117 ~eLl~~~~g~f~ 1128 (1139)
+++.+++...|.
T Consensus 220 ~~~~~~p~~~~~ 231 (356)
T PRK11650 220 VEVYEKPASTFV 231 (356)
T ss_pred HHHHhCCccHHH
Confidence 999987665553
No 171
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5e-43 Score=398.57 Aligned_cols=220 Identities=32% Similarity=0.546 Sum_probs=192.7
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhc
Q 048639 885 RIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQI 964 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i 964 (1139)
.|+++||+++|++ .++|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.+||.++...+. .++++
T Consensus 6 ~l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~--~~r~i 80 (351)
T PRK11432 6 FVVLKNITKRFGS---NTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSI--QQRDI 80 (351)
T ss_pred EEEEEeEEEEECC---eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCH--HHCCE
Confidence 5999999999963 468999999999999999999999999999999999999999999999999987764 36789
Q ss_pred eEEccccccccc-cHHHHhccCCC--cC----CHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHH
Q 048639 965 GLVQQEPLLFSC-SIRNNICYGNE--AA----SEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIAR 1037 (1139)
Q Consensus 965 ~~V~Qdp~LF~g-TIreNL~~~~~--~~----sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalAR 1037 (1139)
+||+|++.+|.. |++||+.++.. .. .++++.++++.+++.++.++.| ..||||||||+||||
T Consensus 81 g~vfQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~~v~~~l~~~gl~~~~~r~~-----------~~LSgGq~QRVaLAR 149 (351)
T PRK11432 81 CMVFQSYALFPHMSLGENVGYGLKMLGVPKEERKQRVKEALELVDLAGFEDRYV-----------DQISGGQQQRVALAR 149 (351)
T ss_pred EEEeCCcccCCCCCHHHHHHHHHhHcCCCHHHHHHHHHHHHHHcCCchhhcCCh-----------hhCCHHHHHHHHHHH
Confidence 999999999965 99999998632 11 2457788899999977655443 479999999999999
Q ss_pred HhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEEEecCh
Q 048639 1038 TLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVVEMGSH 1116 (1139)
Q Consensus 1038 ALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~ 1116 (1139)
||+++|+|||||||||+||+.+.+.+++.|+++.. ..++|+|+|||+++.+.. ||||+||++|+|++.|+|
T Consensus 150 aL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~--------~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~ 221 (351)
T PRK11432 150 ALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQ--------QFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSP 221 (351)
T ss_pred HHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH--------hcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCH
Confidence 99999999999999999999999999999987641 224569999999999866 999999999999999999
Q ss_pred hHHhhccCChHH
Q 048639 1117 STLVAESQGVYS 1128 (1139)
Q Consensus 1117 ~eLl~~~~g~f~ 1128 (1139)
+++.+++...|.
T Consensus 222 ~~~~~~p~~~~~ 233 (351)
T PRK11432 222 QELYRQPASRFM 233 (351)
T ss_pred HHHHhCCCchHH
Confidence 999987766553
No 172
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.2e-43 Score=398.52 Aligned_cols=224 Identities=33% Similarity=0.517 Sum_probs=190.3
Q ss_pred EEEEeEEEECCCCC-CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHH---Hh
Q 048639 886 IEFQNIKFNYPSRP-EVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRR---LR 961 (1139)
Q Consensus 886 I~~~nvsf~Y~~~~-~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~---lR 961 (1139)
|+++||+++|+... +.++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++..++... +|
T Consensus 2 i~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 81 (343)
T PRK11153 2 IELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKAR 81 (343)
T ss_pred EEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 78999999996211 346999999999999999999999999999999999999999999999999998877654 47
Q ss_pred hhceEEcccccccc-ccHHHHhccCCC--cCC----HHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHH
Q 048639 962 SQIGLVQQEPLLFS-CSIRNNICYGNE--AAS----EAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIA 1034 (1139)
Q Consensus 962 ~~i~~V~Qdp~LF~-gTIreNL~~~~~--~~s----d~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrla 1034 (1139)
++++||||++.+|. .|+++|+.++.. ..+ ++++.++++..++.++..+. ..+||||||||++
T Consensus 82 ~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~-----------~~~LSgGq~qRv~ 150 (343)
T PRK11153 82 RQIGMIFQHFNLLSSRTVFDNVALPLELAGTPKAEIKARVTELLELVGLSDKADRY-----------PAQLSGGQKQRVA 150 (343)
T ss_pred cCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhCC-----------hhhCCHHHHHHHH
Confidence 89999999999886 799999986421 122 24567778888876654432 3579999999999
Q ss_pred HHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEEEe
Q 048639 1035 IARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVVEM 1113 (1139)
Q Consensus 1035 lARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ive~ 1113 (1139)
|||||+++|+||||||||++||+.+.+.+++.|++... ..++|+|++||+++.+.. ||||++|++|++++.
T Consensus 151 lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~--------~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~ 222 (343)
T PRK11153 151 IARALASNPKVLLCDEATSALDPATTRSILELLKDINR--------ELGLTIVLITHEMDVVKRICDRVAVIDAGRLVEQ 222 (343)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH--------hcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEE
Confidence 99999999999999999999999999999999997641 224569999999999876 999999999999999
Q ss_pred cChhHHhhccCChHH
Q 048639 1114 GSHSTLVAESQGVYS 1128 (1139)
Q Consensus 1114 G~~~eLl~~~~g~f~ 1128 (1139)
|++++++.++...+.
T Consensus 223 g~~~~~~~~~~~~~~ 237 (343)
T PRK11153 223 GTVSEVFSHPKHPLT 237 (343)
T ss_pred cCHHHHHhCCCcHHH
Confidence 999999876444443
No 173
>COG4615 PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.6e-40 Score=351.43 Aligned_cols=474 Identities=19% Similarity=0.230 Sum_probs=353.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccCCCChhHHHHHHHhcHHHHHHHHHHHHH
Q 048639 606 YSLAFSLVGLFSLFTHTLQHYFFGVVGEKAMTNLRRTLYTGVLRNEIAWFEKPQNDAGSLTSRIVSDTSMVKAIISDRMS 685 (1139)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~~~~ff~~~~~~~G~i~~r~~~D~~~i~~~~~~~l~ 685 (1139)
+...++++..+.++.+.+.......++++...++|.++.++++..|+.-++ +-..++++.++++|+..+. +-...++
T Consensus 50 ~l~~f~~llllf~~ss~is~lg~t~~gq~~I~klr~~~~~kil~tplerie--r~~~~rlla~L~~Dvr~IS-f~~s~lp 126 (546)
T COG4615 50 VLPEFLGLLLLFMVSSLISQLGLTTLGQHFIYKLRSEFIKKILDTPLERIE--RLGSARLLAGLTSDVRNIS-FAFSRLP 126 (546)
T ss_pred eHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHH--Hhcccchhhhhccccccee-ehHhhhH
Confidence 334444555555556666777788899999999999999999999999999 5678999999999999999 5556778
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhHHHHHHHHHHHHHHhhcchHHHHhhcchH
Q 048639 686 VIVQCISSILIATIVSLVVDWRMALVAWAVMPCHFIGGLIQAKSAQGFSGDSAAAHTEFISLTSESASNIRTVASFCHEE 765 (1139)
Q Consensus 686 ~~~~~~~~~~~~~~~~~~~~~~l~lv~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~ 765 (1139)
.+.++++.++++.+...+.++.+.++.++.+.+.++..++......+..+..++.+.++..+.+-.++|.+..+......
T Consensus 127 ~~~qa~il~l~s~aYLayLSp~mf~l~vV~ivv~~~~~~~~m~rv~k~~~aare~ed~Lq~~y~~il~G~KEL~l~r~R~ 206 (546)
T COG4615 127 ELVQAIILTLGSAAYLAYLSPKMFLLTVVWIVVTIWGGFVLMARVYKHMAAARETEDKLQNDYQTILEGRKELTLNRERA 206 (546)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcchhhheechHHH
Confidence 88999999999999999999999888888777777777766666666566777788889999999999999998775444
Q ss_pred HHHH--HHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 048639 766 NILQ--KAKISLEKTKRSSRKESIKYGV----IQGFSLCLWNIAHAVALWYTAVLIDKKQATFRDGIRAYQIFSLTVPSI 839 (1139)
Q Consensus 766 ~~~~--~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 839 (1139)
+... .+...-+... +....... ...+.+.+.+....+.+|+...... .+........+.+.+.-.++
T Consensus 207 ~~~h~~~~~~~a~~~r----~~~~~~n~f~~la~~~~ni~l~~lIGlvf~lal~~~w---~st~~a~tivlvlLflr~pL 279 (546)
T COG4615 207 EYVHNNLYIPDAQEYR----HHIIRANTFHLLAVNWSNIMLLGLIGLVFWLALSLGW---ASTNVAATIVLVLLFLRTPL 279 (546)
T ss_pred HHHHhhhcCcchHHHH----hhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc---chhhHHHHHHHHHHHHhhHH
Confidence 3322 2221111111 11111111 1222333333444444555433322 22223333344455566789
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCccccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEE
Q 048639 840 TELWTLIPTVISAITVLAPAFEILDRKTEIEPDAPESSESGRIKGRIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVAL 919 (1139)
Q Consensus 840 ~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaI 919 (1139)
.++...+|.+..+..+.+++.++...++..+-..++ +.|.- ..|+++||.|+|+.. .--+..||++|++||.|-|
T Consensus 280 ~s~vgilP~l~~AqvA~~kiakle~~~~~a~~~~~q--~~p~~-~~lelrnvrfay~~~--~FhvgPiNl~ikrGelvFl 354 (546)
T COG4615 280 LSAVGILPTLLTAQVAFNKIAKLELAPYKADFPRPQ--AFPDW-KTLELRNVRFAYQDN--AFHVGPINLTIKRGELVFL 354 (546)
T ss_pred HHHHhhhhHHHHHHHHHHHHHHhhcCCccccCCCCC--cCCcc-cceeeeeeeeccCcc--cceecceeeEEecCcEEEE
Confidence 999999999999999999999876533322211111 11111 359999999999742 2458899999999999999
Q ss_pred EcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhceEEccccccccccHHHHhccCCCcCCHHHHHHHHH
Q 048639 920 VGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQIGLVQQEPLLFSCSIRNNICYGNEAASEAEIVEVSK 999 (1139)
Q Consensus 920 vG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~~V~Qdp~LF~gTIreNL~~~~~~~sd~ei~~al~ 999 (1139)
+|.|||||||++++|.|+|.|++|+|++||.+++.-+++++|+-++-|+-|-+||+.++- +...++.+.+..-++
T Consensus 355 iG~NGsGKST~~~LLtGL~~PqsG~I~ldg~pV~~e~ledYR~LfSavFsDyhLF~~ll~-----~e~~as~q~i~~~Lq 429 (546)
T COG4615 355 IGGNGSGKSTLAMLLTGLYQPQSGEILLDGKPVSAEQLEDYRKLFSAVFSDYHLFDQLLG-----PEGKASPQLIEKWLQ 429 (546)
T ss_pred ECCCCCcHHHHHHHHhcccCCCCCceeECCccCCCCCHHHHHHHHHHHhhhHhhhHhhhC-----CccCCChHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999986541 112367777777777
Q ss_pred HcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccc
Q 048639 1000 KANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGE 1079 (1139)
Q Consensus 1000 ~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~ 1079 (1139)
+-.+.... ++.+|-=++ ..||-|||.|+|+--|++-+.+|+++||=-+--||.=++...+.+--..+
T Consensus 430 rLel~~kt-sl~d~~fs~-----~kLStGQkKRlAll~AllEeR~Ilv~DEWAADQDPaFRR~FY~~lLp~LK------- 496 (546)
T COG4615 430 RLELAHKT-SLNDGRFSN-----LKLSTGQKKRLALLLALLEERDILVLDEWAADQDPAFRREFYQVLLPLLK------- 496 (546)
T ss_pred HHHHhhhh-cccCCcccc-----cccccchHHHHHHHHHHHhhCCeEEeehhhccCChHHHHHHHHHHhHHHH-------
Confidence 76554432 233332222 36999999999999999999999999999999999999998887654321
Q ss_pred cCCCeEEEEEecCchhhhcCCEEEEEeCCEEEEe
Q 048639 1080 LASRTTQITVAHRLATVINSDVIVVMDKGEVVEM 1113 (1139)
Q Consensus 1080 ~~~~tTvI~IaHrl~ti~~~DrI~vl~~G~ive~ 1113 (1139)
..++||+.|||+-.--..+||++.|++|+++|.
T Consensus 497 -~qGKTI~aIsHDd~YF~~ADrll~~~~G~~~e~ 529 (546)
T COG4615 497 -EQGKTIFAISHDDHYFIHADRLLEMRNGQLSEL 529 (546)
T ss_pred -HhCCeEEEEecCchhhhhHHHHHHHhcCceeec
Confidence 234559999999999999999999999999986
No 174
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-42 Score=380.41 Aligned_cols=223 Identities=32% Similarity=0.496 Sum_probs=193.2
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccc---CCccEEEECCcccCCCChHHHh
Q 048639 885 RIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYD---PNEGIILIDGKGIKEYNLRRLR 961 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~---p~~G~I~idG~di~~~~l~~lR 961 (1139)
.|+++||+++|++ .++|+|+||+|++||.+||+|+||||||||+++|+|+++ |++|+|.+||.++...+...+|
T Consensus 2 ~~~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~ 78 (246)
T PRK14269 2 IAKTTNLNLFYGK---KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALR 78 (246)
T ss_pred ceeeeeeEEEECC---EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHh
Confidence 3789999999963 369999999999999999999999999999999999985 6899999999999988888889
Q ss_pred hhceEEccccccccccHHHHhccCCC--------cCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHH
Q 048639 962 SQIGLVQQEPLLFSCSIRNNICYGNE--------AASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRI 1033 (1139)
Q Consensus 962 ~~i~~V~Qdp~LF~gTIreNL~~~~~--------~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl 1033 (1139)
++++|+||+|.+|..|+++|+.++.. ...++++.++++.+++.+++..+ ..+.+.+||||||||+
T Consensus 79 ~~i~~~~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-------~~~~~~~LS~G~~qrv 151 (246)
T PRK14269 79 KNVGMVFQQPNVFVKSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEVKDK-------LKQNALALSGGQQQRL 151 (246)
T ss_pred hhEEEEecCCccccccHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhhhHH-------hcCCcccCCHHHHHHH
Confidence 99999999999999999999986521 11234577888999887665432 2345578999999999
Q ss_pred HHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEEE
Q 048639 1034 AIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVVE 1112 (1139)
Q Consensus 1034 alARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ive 1112 (1139)
+|||||+++|++|||||||++||+.+...+.+.|++.. . ++|+|+|||+++.+.. ||+|++|++|++++
T Consensus 152 ~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~---------~-~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~ 221 (246)
T PRK14269 152 CIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELS---------H-NLSMIMVTHNMQQGKRVADYTAFFHLGELIE 221 (246)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHh---------C-CCEEEEEecCHHHHHhhCcEEEEEECCEEEE
Confidence 99999999999999999999999999999999998764 3 4569999999998875 99999999999999
Q ss_pred ecChhHHhhccCChH
Q 048639 1113 MGSHSTLVAESQGVY 1127 (1139)
Q Consensus 1113 ~G~~~eLl~~~~g~f 1127 (1139)
.|+++++...+...+
T Consensus 222 ~g~~~~~~~~~~~~~ 236 (246)
T PRK14269 222 FGESKEFFENPKQEK 236 (246)
T ss_pred ECCHHHHHhCCCcHH
Confidence 999999986543333
No 175
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=2.8e-43 Score=389.22 Aligned_cols=221 Identities=32% Similarity=0.548 Sum_probs=198.2
Q ss_pred ccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhh
Q 048639 884 GRIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQ 963 (1139)
Q Consensus 884 g~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~ 963 (1139)
..|+++||+.+|. +..+++|+||+|++||.++++|||||||||++++|.||..|++|+|.+||.|+..++++ ++.
T Consensus 4 ~~l~i~~v~k~yg---~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~--kR~ 78 (352)
T COG3842 4 PALEIRNVSKSFG---DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPE--KRP 78 (352)
T ss_pred ceEEEEeeeeecC---CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChh--hcc
Confidence 3599999999995 45799999999999999999999999999999999999999999999999999998875 578
Q ss_pred ceEEcccccccc-ccHHHHhccCCC---cCC----HHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHH
Q 048639 964 IGLVQQEPLLFS-CSIRNNICYGNE---AAS----EAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAI 1035 (1139)
Q Consensus 964 i~~V~Qdp~LF~-gTIreNL~~~~~---~~s----d~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlal 1035 (1139)
|++|+|+.-||+ -||++|+.||.. ... ++++.++++.+++.++-.+.| ..|||||+||+||
T Consensus 79 ig~VFQ~YALFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L~~~~~R~p-----------~qLSGGQqQRVAL 147 (352)
T COG3842 79 IGMVFQSYALFPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELVGLEGFADRKP-----------HQLSGGQQQRVAL 147 (352)
T ss_pred cceeecCcccCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHcCchhhhhhCh-----------hhhChHHHHHHHH
Confidence 999999999995 699999999854 112 247899999999999877766 4799999999999
Q ss_pred HHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEEEec
Q 048639 1036 ARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVVEMG 1114 (1139)
Q Consensus 1036 ARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ive~G 1114 (1139)
||||..+|++|+||||-|+||.+-...++.-+++... +-+.|.|+|||+-+.... +|||+||.+|+|...|
T Consensus 148 ARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~--------~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~g 219 (352)
T COG3842 148 ARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQR--------ELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQVG 219 (352)
T ss_pred HHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHH--------hcCCeEEEEECCHHHHhhhccceEEccCCceeecC
Confidence 9999999999999999999999999999999987651 235679999999988765 9999999999999999
Q ss_pred ChhHHhhccCChHH
Q 048639 1115 SHSTLVAESQGVYS 1128 (1139)
Q Consensus 1115 ~~~eLl~~~~g~f~ 1128 (1139)
+|+|+..+|...|-
T Consensus 220 tP~eiY~~P~~~fV 233 (352)
T COG3842 220 TPEEIYERPATRFV 233 (352)
T ss_pred CHHHHhhCcchHHH
Confidence 99999998877774
No 176
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-42 Score=397.17 Aligned_cols=217 Identities=28% Similarity=0.476 Sum_probs=184.5
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcce
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNI 335 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 335 (1139)
.|+++|++++|++ +.++|+|+||++++||+++|+||||||||||+++|+|+.+|++|+|.++|+++.+.++. +++|
T Consensus 3 ~l~i~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 78 (356)
T PRK11650 3 GLKLQAVRKSYDG--KTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPA--DRDI 78 (356)
T ss_pred EEEEEeEEEEeCC--CCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 4899999999942 24699999999999999999999999999999999999999999999999999877654 4789
Q ss_pred EEEecCCCCCc-ccHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHcc
Q 048639 336 GAVSQEPSLFT-GSLMDNIKVGNMD--ADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVK 412 (1139)
Q Consensus 336 ~~v~Q~~~l~~-~ti~~ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~ 412 (1139)
|||+|++.+|+ .||+|||.|+... .+..+..+ .+.+.++.+ |++......+.+||||||||++|||||+.
T Consensus 79 g~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~-----~~~~~l~~~--gL~~~~~~~~~~LSgGq~QRvalARAL~~ 151 (356)
T PRK11650 79 AMVFQNYALYPHMSVRENMAYGLKIRGMPKAEIEE-----RVAEAARIL--ELEPLLDRKPRELSGGQRQRVAMGRAIVR 151 (356)
T ss_pred EEEeCCccccCCCCHHHHHHhHHhhcCCCHHHHHH-----HHHHHHHHc--CChhHhhCChhhCCHHHHHHHHHHHHHhc
Confidence 99999999996 5999999987431 12222211 122334444 44455566778999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhcc
Q 048639 413 NPPILLLDEATSALDSESEKLVQEALERAMQ--GRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQT 483 (1139)
Q Consensus 413 ~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 483 (1139)
+|++||||||||+||+.++..+.+.|+++.+ +.|+|+|||+++.+.. ||+|++|++|++++.|+++++.++
T Consensus 152 ~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~~~~ 225 (356)
T PRK11650 152 EPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEVYEK 225 (356)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHHHhC
Confidence 9999999999999999999999999988653 7899999999998865 999999999999999999998764
No 177
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-42 Score=388.56 Aligned_cols=217 Identities=33% Similarity=0.546 Sum_probs=185.7
Q ss_pred EEEEeEEEECCCCC--CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCC--hHHHh
Q 048639 886 IEFQNIKFNYPSRP--EVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYN--LRRLR 961 (1139)
Q Consensus 886 I~~~nvsf~Y~~~~--~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~--l~~lR 961 (1139)
|+++||+++|+... ..++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ...+|
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (287)
T PRK13637 3 IKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDIR 82 (287)
T ss_pred EEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHHh
Confidence 78999999997421 136999999999999999999999999999999999999999999999999998754 45788
Q ss_pred hhceEEcccc--ccccccHHHHhccCCC--cCCH----HHHHHHHHHcCch--HHHhhCCCCccccccCCCCCCChHHHH
Q 048639 962 SQIGLVQQEP--LLFSCSIRNNICYGNE--AASE----AEIVEVSKKANIH--DFISSLPDGYDTVVGEKGCQLSGGQKQ 1031 (1139)
Q Consensus 962 ~~i~~V~Qdp--~LF~gTIreNL~~~~~--~~sd----~ei~~al~~~~l~--~~i~~lp~gldt~v~e~G~~LSgGQrQ 1031 (1139)
++++||||+| .+|+.|+++|+.++.. ..++ +++.++++.+++. ++ .......|||||||
T Consensus 83 ~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~-----------~~~~~~~LSgGq~q 151 (287)
T PRK13637 83 KKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEEIENRVKRAMNIVGLDYEDY-----------KDKSPFELSGGQKR 151 (287)
T ss_pred hceEEEecCchhccccccHHHHHHhHHHHCCCCHHHHHHHHHHHHHHcCCCchhh-----------ccCCcccCCHHHHH
Confidence 9999999998 5788999999986521 1232 3567788888875 22 22334679999999
Q ss_pred HHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEE
Q 048639 1032 RIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEV 1110 (1139)
Q Consensus 1032 rlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~i 1110 (1139)
|++|||||+.+|++|||||||++||+.+...+.+.|+++.. ..++|||+|||+++.+.. ||||++|++|++
T Consensus 152 rv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~--------~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i 223 (287)
T PRK13637 152 RVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHK--------EYNMTIILVSHSMEDVAKLADRIIVMNKGKC 223 (287)
T ss_pred HHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHH--------hcCCEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 99999999999999999999999999999999999987641 224569999999999865 999999999999
Q ss_pred EEecChhHHhh
Q 048639 1111 VEMGSHSTLVA 1121 (1139)
Q Consensus 1111 ve~G~~~eLl~ 1121 (1139)
++.|+++++++
T Consensus 224 ~~~g~~~~~~~ 234 (287)
T PRK13637 224 ELQGTPREVFK 234 (287)
T ss_pred EEECCHHHHHh
Confidence 99999999875
No 178
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=9.2e-43 Score=397.23 Aligned_cols=220 Identities=30% Similarity=0.493 Sum_probs=192.1
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhc
Q 048639 885 RIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQI 964 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i 964 (1139)
.|+++||+++|++ .++|+|+||+|++||+++|+||||||||||+++|.|+.+|++|+|.+||.++.+.+.. ++++
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~--~r~i 78 (353)
T TIGR03265 4 YLSIDNIRKRFGA---FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQ--KRDY 78 (353)
T ss_pred EEEEEEEEEEeCC---eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 4899999999963 4589999999999999999999999999999999999999999999999999877653 6789
Q ss_pred eEEcccccccc-ccHHHHhccCCC--cC----CHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHH
Q 048639 965 GLVQQEPLLFS-CSIRNNICYGNE--AA----SEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIAR 1037 (1139)
Q Consensus 965 ~~V~Qdp~LF~-gTIreNL~~~~~--~~----sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalAR 1037 (1139)
+||+|++.+|. .|+++|+.++.. .. .++++.++++..++.++.++.| .+||||||||+||||
T Consensus 79 g~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~l~L~~~~~~~~-----------~~LSgGq~QRvaLAR 147 (353)
T TIGR03265 79 GIVFQSYALFPNLTVADNIAYGLKNRGMGRAEVAERVAELLDLVGLPGSERKYP-----------GQLSGGQQQRVALAR 147 (353)
T ss_pred EEEeCCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCchhhCCh-----------hhCCHHHHHHHHHHH
Confidence 99999999996 699999997632 11 2356788888888877655443 579999999999999
Q ss_pred HhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEEEecCh
Q 048639 1038 TLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVVEMGSH 1116 (1139)
Q Consensus 1038 ALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~ 1116 (1139)
||+++|++|+||||||+||..+.+.+.+.|++... ..++|+|+|||+++.+.. ||||++|++|++++.|+|
T Consensus 148 aL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~--------~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~ 219 (353)
T TIGR03265 148 ALATSPGLLLLDEPLSALDARVREHLRTEIRQLQR--------RLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTP 219 (353)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH--------hcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCH
Confidence 99999999999999999999999999999987641 224569999999999866 999999999999999999
Q ss_pred hHHhhccCChHH
Q 048639 1117 STLVAESQGVYS 1128 (1139)
Q Consensus 1117 ~eLl~~~~g~f~ 1128 (1139)
+++.+++...|.
T Consensus 220 ~~~~~~p~~~~~ 231 (353)
T TIGR03265 220 QEIYRHPATPFV 231 (353)
T ss_pred HHHHhCCCCHHH
Confidence 999988766653
No 179
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-42 Score=385.47 Aligned_cols=214 Identities=33% Similarity=0.562 Sum_probs=189.1
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhc
Q 048639 885 RIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQI 964 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i 964 (1139)
-|+++||+++|+. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 4 ~l~~~~l~~~~~~--~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i 81 (274)
T PRK13647 4 IIEVEDLHFRYKD--GTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSKV 81 (274)
T ss_pred eEEEEEEEEEeCC--CCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhhE
Confidence 4899999999963 23699999999999999999999999999999999999999999999999999988888889999
Q ss_pred eEEcccc--ccccccHHHHhccCCC--cC----CHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHH
Q 048639 965 GLVQQEP--LLFSCSIRNNICYGNE--AA----SEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIA 1036 (1139)
Q Consensus 965 ~~V~Qdp--~LF~gTIreNL~~~~~--~~----sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalA 1036 (1139)
+|+||+| .+|..|+++|+.++.. .. .++++.++++.+++.++..+.| ..||||||||++||
T Consensus 82 ~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----------~~LSgG~~qrv~la 150 (274)
T PRK13647 82 GLVFQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVERRVEEALKAVRMWDFRDKPP-----------YHLSYGQKKRVAIA 150 (274)
T ss_pred EEEecChhhhhccCcHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcCCh-----------hhCCHHHHHHHHHH
Confidence 9999998 6788999999987521 11 2356788899999987765554 36999999999999
Q ss_pred HHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEEEecC
Q 048639 1037 RTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVVEMGS 1115 (1139)
Q Consensus 1037 RALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~ 1115 (1139)
|||+++|++|||||||++||+.+...+.+.|++.. ..++|+|++||+++.+.. ||||++|++|++++.|+
T Consensus 151 raL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~---------~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~ 221 (274)
T PRK13647 151 GVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLH---------NQGKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGD 221 (274)
T ss_pred HHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHH---------HCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECC
Confidence 99999999999999999999999999999999764 234569999999999865 99999999999999999
Q ss_pred hhHHh
Q 048639 1116 HSTLV 1120 (1139)
Q Consensus 1116 ~~eLl 1120 (1139)
++++.
T Consensus 222 ~~~~~ 226 (274)
T PRK13647 222 KSLLT 226 (274)
T ss_pred HHHhc
Confidence 87653
No 180
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=1.1e-42 Score=377.12 Aligned_cols=214 Identities=36% Similarity=0.622 Sum_probs=178.5
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhcc-----CCCccEEEECCccCCCCC--HH
Q 048639 257 IDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFY-----DPSNGDILIDSLNIKDLD--LK 329 (1139)
Q Consensus 257 i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~-----~~~~G~i~~~g~~~~~~~--~~ 329 (1139)
|+++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|++ +|++|+|.++|+++...+ ..
T Consensus 1 i~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 77 (227)
T cd03260 1 IELRDLNVYYGD---KHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVL 77 (227)
T ss_pred CEEEEEEEEcCC---ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHHH
Confidence 478999999964 36999999999999999999999999999999999999 999999999999987765 55
Q ss_pred HHhcceEEEecCCCCCcccHHHHHhcCCCCC--CH-HHHHHHHHHhcHHHHHHhCCCCCCcccccc--CCCCChHHHHHH
Q 048639 330 SLRKNIGAVSQEPSLFTGSLMDNIKVGNMDA--DD-EQIYNASMMANAHSFISQLPDQYSTELGQR--GVQLSGGQKQRI 404 (1139)
Q Consensus 330 ~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~~--~~-~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~--g~~LSgGqkqRi 404 (1139)
.++++++|++|++.+|+.|++||+.++.... .. ++.. ..+.+.++.+ |+....... +.+||||||||+
T Consensus 78 ~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~~~LSgG~~qrv 150 (227)
T cd03260 78 ELRRRVGMVFQKPNPFPGSIYDNVAYGLRLHGIKLKEELD-----ERVEEALRKA--ALWDEVKDRLHALGLSGGQQQRL 150 (227)
T ss_pred HHHhhEEEEecCchhccccHHHHHHhHHHhcCCCcHHHHH-----HHHHHHHHHc--CCChHHhccCCcccCCHHHHHHH
Confidence 6788999999999999789999998753211 11 1111 1112334433 333333334 589999999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhh
Q 048639 405 AIARAIVKNPPILLLDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSL 480 (1139)
Q Consensus 405 ~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l 480 (1139)
+|||||+.+|++|||||||++||+.++..+.+.|+++.+.+|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 151 ~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 227 (227)
T cd03260 151 CLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKEYTIVIVTHNMQQAARVADRTAFLLNGRLVEFGPTEQI 227 (227)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhCcEEEEEeccHHHHHHhCCEEEEEeCCEEEEecCcccC
Confidence 9999999999999999999999999999999999987655899999999999875 999999999999999987653
No 181
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-42 Score=393.52 Aligned_cols=216 Identities=29% Similarity=0.494 Sum_probs=184.4
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcce
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNI 335 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 335 (1139)
.|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.+||.++.+.++. +++|
T Consensus 6 ~l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 80 (351)
T PRK11432 6 FVVLKNITKRFGS---NTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSIQ--QRDI 80 (351)
T ss_pred EEEEEeEEEEECC---eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 5999999999963 4599999999999999999999999999999999999999999999999999876643 5789
Q ss_pred EEEecCCCCCcc-cHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHcc
Q 048639 336 GAVSQEPSLFTG-SLMDNIKVGNM--DADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVK 412 (1139)
Q Consensus 336 ~~v~Q~~~l~~~-ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~ 412 (1139)
+||+|++.+|+. |++|||.|+.. ....++..+ .+.+.++.+ |+.......+.+|||||||||||||||+.
T Consensus 81 g~vfQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~-----~v~~~l~~~--gl~~~~~r~~~~LSgGq~QRVaLARaL~~ 153 (351)
T PRK11432 81 CMVFQSYALFPHMSLGENVGYGLKMLGVPKEERKQ-----RVKEALELV--DLAGFEDRYVDQISGGQQQRVALARALIL 153 (351)
T ss_pred EEEeCCcccCCCCCHHHHHHHHHhHcCCCHHHHHH-----HHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHHHHc
Confidence 999999999975 99999998743 122222211 122333333 34444566778999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhcc
Q 048639 413 NPPILLLDEATSALDSESEKLVQEALERAMQ--GRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQT 483 (1139)
Q Consensus 413 ~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 483 (1139)
+|++||||||||+||+.++..+.+.|+++.+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 154 ~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~~~~ 227 (351)
T PRK11432 154 KPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQELYRQ 227 (351)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 9999999999999999999999999988754 7999999999999865 999999999999999999998754
No 182
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-42 Score=384.88 Aligned_cols=222 Identities=28% Similarity=0.485 Sum_probs=187.2
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcce
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNI 335 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 335 (1139)
.++++|++++|++....++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13650 4 IIEVKNLTFKYKEDQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHKI 83 (279)
T ss_pred eEEEEeEEEEcCCCCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhhc
Confidence 48999999999743224699999999999999999999999999999999999999999999999999877777888899
Q ss_pred EEEecCCC--CCcccHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHc
Q 048639 336 GAVSQEPS--LFTGSLMDNIKVGNMD--ADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIV 411 (1139)
Q Consensus 336 ~~v~Q~~~--l~~~ti~~ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~ 411 (1139)
+||+|+|. ++..|++|||.++... .+.++..+. +.+.++.+ |++......+.+||||||||++|||||+
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~-----~~~~l~~~--gL~~~~~~~~~~LSgGq~qrv~lAral~ 156 (279)
T PRK13650 84 GMVFQNPDNQFVGATVEDDVAFGLENKGIPHEEMKER-----VNEALELV--GMQDFKEREPARLSGGQKQRVAIAGAVA 156 (279)
T ss_pred eEEEcChHHhcccccHHHHHHhhHHhCCCCHHHHHHH-----HHHHHHHC--CCHhHhhCCcccCCHHHHHHHHHHHHHH
Confidence 99999984 5567999999987421 222222111 12234443 3444456667899999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CCeEEEEecCccchhccCEEEEEeCcEEEEecChhhhhccc
Q 048639 412 KNPPILLLDEATSALDSESEKLVQEALERAMQ--GRTVILIAHRMSTIVNADMIAVVEDGQVTETGTHHSLLQTS 484 (1139)
Q Consensus 412 ~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~ 484 (1139)
.+|++|||||||++||+.+.+.+.+.++++.+ |+|+|++||+++.+..||+|++|++|++++.|+++++....
T Consensus 157 ~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~~ 231 (279)
T PRK13650 157 MRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDEVALSDRVLVMKNGQVESTSTPRELFSRG 231 (279)
T ss_pred cCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHHcCh
Confidence 99999999999999999999999999988753 89999999999998779999999999999999999886543
No 183
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=1.6e-42 Score=378.34 Aligned_cols=221 Identities=27% Similarity=0.512 Sum_probs=186.4
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHH-hcce
Q 048639 257 IDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSL-RKNI 335 (1139)
Q Consensus 257 i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~-~~~i 335 (1139)
++++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+ +..+
T Consensus 1 l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (236)
T cd03219 1 LEVRGLTKRFGG---LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLGI 77 (236)
T ss_pred CeeeeeEEEECC---EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcCE
Confidence 468999999963 459999999999999999999999999999999999999999999999999887766544 5679
Q ss_pred EEEecCCCCCcc-cHHHHHhcCCCCCCHHHH-------HHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHH
Q 048639 336 GAVSQEPSLFTG-SLMDNIKVGNMDADDEQI-------YNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIA 407 (1139)
Q Consensus 336 ~~v~Q~~~l~~~-ti~~ni~~g~~~~~~~~~-------~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lA 407 (1139)
+|+||++.+|+. |++||+.++........+ ........+.+.++.+ |++...+..+.+||||||||++||
T Consensus 78 ~~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la 155 (236)
T cd03219 78 GRTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERV--GLADLADRPAGELSYGQQRRLEIA 155 (236)
T ss_pred EEEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHc--CccchhhCChhhCCHHHHHHHHHH
Confidence 999999999886 999999876421110000 0011122334556666 566667788899999999999999
Q ss_pred HHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhc
Q 048639 408 RAIVKNPPILLLDEATSALDSESEKLVQEALERAM-QGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQ 482 (1139)
Q Consensus 408 Ral~~~~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 482 (1139)
|||+.+|+++||||||++||+.++..+.+.|+++. +++|+|++||+++.+.. ||++++|++|++++.|+++++..
T Consensus 156 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 232 (236)
T cd03219 156 RALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRVIAEGTPDEVRN 232 (236)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEeecCHHHhcc
Confidence 99999999999999999999999999999998865 58999999999999876 99999999999999999988754
No 184
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-42 Score=387.05 Aligned_cols=218 Identities=29% Similarity=0.502 Sum_probs=184.0
Q ss_pred EEEEeEEEECCCCC--CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCC----ChHH
Q 048639 886 IEFQNIKFNYPSRP--EVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEY----NLRR 959 (1139)
Q Consensus 886 I~~~nvsf~Y~~~~--~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~----~l~~ 959 (1139)
|+++||+++|++.+ ..++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +...
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (286)
T PRK13646 3 IRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIRP 82 (286)
T ss_pred EEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 78999999996432 23699999999999999999999999999999999999999999999999998653 3467
Q ss_pred HhhhceEEcccc--ccccccHHHHhccCCC--cCCH----HHHHHHHHHcCch-HHHhhCCCCccccccCCCCCCChHHH
Q 048639 960 LRSQIGLVQQEP--LLFSCSIRNNICYGNE--AASE----AEIVEVSKKANIH-DFISSLPDGYDTVVGEKGCQLSGGQK 1030 (1139)
Q Consensus 960 lR~~i~~V~Qdp--~LF~gTIreNL~~~~~--~~sd----~ei~~al~~~~l~-~~i~~lp~gldt~v~e~G~~LSgGQr 1030 (1139)
+|++++||||+| .+|..|+++|+.++.. ..+. +++.++++.+++. +. ....+.+||||||
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~-----------~~~~~~~LSgGq~ 151 (286)
T PRK13646 83 VRKRIGMVFQFPESQLFEDTVEREIIFGPKNFKMNLDEVKNYAHRLLMDLGFSRDV-----------MSQSPFQMSGGQM 151 (286)
T ss_pred HHhheEEEecChHhccchhhHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChhh-----------hhCCcccCCHHHH
Confidence 899999999998 5888999999987521 1232 3445556666553 22 2234568999999
Q ss_pred HHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCE
Q 048639 1031 QRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGE 1109 (1139)
Q Consensus 1031 QrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ 1109 (1139)
||++|||||+.+|+||||||||++||+.+...+.+.|+++.. +.++|||+|||+++.+.. ||||++|++|+
T Consensus 152 qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~--------~~g~tvl~vtH~~~~~~~~~dri~~l~~G~ 223 (286)
T PRK13646 152 RKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQT--------DENKTIILVSHDMNEVARYADEVIVMKEGS 223 (286)
T ss_pred HHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHH--------hCCCEEEEEecCHHHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999999999997630 234679999999999865 99999999999
Q ss_pred EEEecChhHHhhc
Q 048639 1110 VVEMGSHSTLVAE 1122 (1139)
Q Consensus 1110 ive~G~~~eLl~~ 1122 (1139)
+++.|+++++.++
T Consensus 224 i~~~g~~~~~~~~ 236 (286)
T PRK13646 224 IVSQTSPKELFKD 236 (286)
T ss_pred EEEECCHHHHHhC
Confidence 9999999998764
No 185
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.3e-42 Score=383.11 Aligned_cols=220 Identities=30% Similarity=0.545 Sum_probs=185.8
Q ss_pred EEEEeEEEECCCCC--CCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCC--HHHHh
Q 048639 257 IDIRDVCFAYPSRP--DQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLD--LKSLR 332 (1139)
Q Consensus 257 i~~~~v~~~y~~~~--~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~--~~~~~ 332 (1139)
|+++|++++|++.. .+++|+||||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+ ...++
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (287)
T PRK13637 3 IKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDIR 82 (287)
T ss_pred EEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHHh
Confidence 78999999997421 146999999999999999999999999999999999999999999999999987643 35678
Q ss_pred cceEEEecCC--CCCcccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhCCCCCC--ccccccCCCCChHHHHHHHH
Q 048639 333 KNIGAVSQEP--SLFTGSLMDNIKVGNM--DADDEQIYNASMMANAHSFISQLPDQYS--TELGQRGVQLSGGQKQRIAI 406 (1139)
Q Consensus 333 ~~i~~v~Q~~--~l~~~ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~--t~i~~~g~~LSgGqkqRi~l 406 (1139)
++||||||+| .+|+.|++|||.++.. ..+.++..+. +.+.++.+ |+. +.....+..||||||||++|
T Consensus 83 ~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--gL~~~~~~~~~~~~LSgGq~qrv~i 155 (287)
T PRK13637 83 KKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEEIENR-----VKRAMNIV--GLDYEDYKDKSPFELSGGQKRRVAI 155 (287)
T ss_pred hceEEEecCchhccccccHHHHHHhHHHHCCCCHHHHHHH-----HHHHHHHc--CCCchhhccCCcccCCHHHHHHHHH
Confidence 8999999998 5778899999998632 1233332222 22334444 343 45677789999999999999
Q ss_pred HHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhcc
Q 048639 407 ARAIVKNPPILLLDEATSALDSESEKLVQEALERAMQ--GRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQT 483 (1139)
Q Consensus 407 ARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 483 (1139)
||||+.+|++|||||||++||+.++..+.+.++++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 156 AraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g~~~~~~~~ 235 (287)
T PRK13637 156 AGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCELQGTPREVFKE 235 (287)
T ss_pred HHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHHhC
Confidence 9999999999999999999999999999999988753 7999999999999865 999999999999999999988654
No 186
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=1.8e-42 Score=394.93 Aligned_cols=217 Identities=29% Similarity=0.486 Sum_probs=188.1
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcce
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNI 335 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 335 (1139)
.|+++|++++|++ ..+|+|+||++++||+++|+||||||||||+++|+|+.+|++|+|.+||+++.+.++. ++.|
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~--~r~i 78 (353)
T TIGR03265 4 YLSIDNIRKRFGA---FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQ--KRDY 78 (353)
T ss_pred EEEEEEEEEEeCC---eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 4899999999963 4599999999999999999999999999999999999999999999999999876654 5789
Q ss_pred EEEecCCCCCc-ccHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHcc
Q 048639 336 GAVSQEPSLFT-GSLMDNIKVGNMD--ADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVK 412 (1139)
Q Consensus 336 ~~v~Q~~~l~~-~ti~~ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~ 412 (1139)
+||+|++.+|+ .|++||+.|+... .+..+. ...+++.++.+ |++......+.+||||||||++|||||+.
T Consensus 79 g~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~-----~~~~~~~l~~l--~L~~~~~~~~~~LSgGq~QRvaLARaL~~ 151 (353)
T TIGR03265 79 GIVFQSYALFPNLTVADNIAYGLKNRGMGRAEV-----AERVAELLDLV--GLPGSERKYPGQLSGGQQQRVALARALAT 151 (353)
T ss_pred EEEeCCcccCCCCcHHHHHHHHHHhcCCCHHHH-----HHHHHHHHHHc--CCCchhhCChhhCCHHHHHHHHHHHHHhc
Confidence 99999999996 5999999987431 112221 12234455655 56666778889999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhccc
Q 048639 413 NPPILLLDEATSALDSESEKLVQEALERAMQ--GRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQTS 484 (1139)
Q Consensus 413 ~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~ 484 (1139)
+|+++|||||||+||+.++..+.+.|+++.+ +.|+|+|||+++.+.. ||+|++|++|++++.|+++++.+..
T Consensus 152 ~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~~~~p 226 (353)
T TIGR03265 152 SPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEIYRHP 226 (353)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCC
Confidence 9999999999999999999999999988753 7899999999999865 9999999999999999999997653
No 187
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=1.5e-42 Score=394.17 Aligned_cols=209 Identities=33% Similarity=0.529 Sum_probs=183.4
Q ss_pred cccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHH----hhhceEEcccccccc-
Q 048639 901 VTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRL----RSQIGLVQQEPLLFS- 975 (1139)
Q Consensus 901 ~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~l----R~~i~~V~Qdp~LF~- 975 (1139)
.++|+|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.+||.++..++...+ |++++||||++.+|+
T Consensus 6 ~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~~ 85 (363)
T TIGR01186 6 KKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFPH 85 (363)
T ss_pred ceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCCC
Confidence 469999999999999999999999999999999999999999999999999999998887 789999999999997
Q ss_pred ccHHHHhccCCC------cCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhcCCCCEEEee
Q 048639 976 CSIRNNICYGNE------AASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIARTLLKRPAIMLLD 1049 (1139)
Q Consensus 976 gTIreNL~~~~~------~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalARALlr~p~ILlLD 1049 (1139)
.|+++|+.++.+ ....+++.++++.++|.++..+.| .+||||||||++|||||+++|+|||||
T Consensus 86 ~TV~eNi~~~~~~~~~~~~~~~~~~~~~l~~vgL~~~~~~~p-----------~~LSGGq~QRV~lARAL~~~p~iLLlD 154 (363)
T TIGR01186 86 MTILQNTSLGPELLGWPEQERKEKALELLKLVGLEEYEHRYP-----------DELSGGMQQRVGLARALAAEPDILLMD 154 (363)
T ss_pred CCHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCchhhhCCh-----------hhCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 599999987522 112456788899999877765544 479999999999999999999999999
Q ss_pred ccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEEEecChhHHhhccCChHH
Q 048639 1050 EATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVVEMGSHSTLVAESQGVYS 1128 (1139)
Q Consensus 1050 EaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eLl~~~~g~f~ 1128 (1139)
||||+||+.+.+.+++.+.+... ..++|+|+|||+++.+.. ||||++|++|++++.|+|+++++++...|.
T Consensus 155 EP~saLD~~~r~~l~~~l~~l~~--------~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei~~~p~~~~~ 226 (363)
T TIGR01186 155 EAFSALDPLIRDSMQDELKKLQA--------TLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEILRNPANEYV 226 (363)
T ss_pred CCcccCCHHHHHHHHHHHHHHHH--------hcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHHHhCcccHHH
Confidence 99999999999999999987631 224469999999998765 999999999999999999999977544443
No 188
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=2.5e-42 Score=396.93 Aligned_cols=222 Identities=24% Similarity=0.458 Sum_probs=195.4
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhc
Q 048639 885 RIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQI 964 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i 964 (1139)
.|+++||+++|++ .++|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|.++|.++.+++...+|+++
T Consensus 3 ~L~~~nls~~y~~---~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~i 79 (402)
T PRK09536 3 MIDVSDLSVEFGD---TTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRRV 79 (402)
T ss_pred eEEEeeEEEEECC---EEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcce
Confidence 4899999999963 4699999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEcccccc-ccccHHHHhccCCC----------cCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHH
Q 048639 965 GLVQQEPLL-FSCSIRNNICYGNE----------AASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRI 1033 (1139)
Q Consensus 965 ~~V~Qdp~L-F~gTIreNL~~~~~----------~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl 1033 (1139)
++|||++.+ |+.|+++|+.++.. ...++++.++++.+++.++.++. ..+||||||||+
T Consensus 80 g~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~~~~-----------~~~LSgGerQRv 148 (402)
T PRK09536 80 ASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFADRP-----------VTSLSGGERQRV 148 (402)
T ss_pred EEEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhhcCC-----------hhhCCHHHHHHH
Confidence 999999987 67899999987531 12245688999999998765432 347999999999
Q ss_pred HHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEEE
Q 048639 1034 AIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVVE 1112 (1139)
Q Consensus 1034 alARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ive 1112 (1139)
+|||||+++|+||||||||++||+.+...+++.|+++. ++++|+|+++|+++.+.. ||||++|++|++++
T Consensus 149 ~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~---------~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~ 219 (402)
T PRK09536 149 LLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLV---------DDGKTAVAAIHDLDLAARYCDELVLLADGRVRA 219 (402)
T ss_pred HHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHH---------hcCCEEEEEECCHHHHHHhCCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999874 334569999999999965 99999999999999
Q ss_pred ecChhHHhhccCChHHHHH
Q 048639 1113 MGSHSTLVAESQGVYSRLY 1131 (1139)
Q Consensus 1113 ~G~~~eLl~~~~g~f~~l~ 1131 (1139)
.|+|++++.. ....+++
T Consensus 220 ~G~~~ev~~~--~~l~~~~ 236 (402)
T PRK09536 220 AGPPADVLTA--DTLRAAF 236 (402)
T ss_pred ecCHHHHhCc--HHHHHHh
Confidence 9999999853 3444444
No 189
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-42 Score=386.55 Aligned_cols=217 Identities=27% Similarity=0.517 Sum_probs=185.3
Q ss_pred EEEEeEEEECCCCC--CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCC----CChHH
Q 048639 886 IEFQNIKFNYPSRP--EVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKE----YNLRR 959 (1139)
Q Consensus 886 I~~~nvsf~Y~~~~--~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~----~~l~~ 959 (1139)
|+++||+|+|+... ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .+...
T Consensus 2 i~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 81 (288)
T PRK13643 2 IKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIKP 81 (288)
T ss_pred EEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHHH
Confidence 78999999997321 1259999999999999999999999999999999999999999999999999863 34567
Q ss_pred HhhhceEEcccc--ccccccHHHHhccCCC--cCC----HHHHHHHHHHcCch-HHHhhCCCCccccccCCCCCCChHHH
Q 048639 960 LRSQIGLVQQEP--LLFSCSIRNNICYGNE--AAS----EAEIVEVSKKANIH-DFISSLPDGYDTVVGEKGCQLSGGQK 1030 (1139)
Q Consensus 960 lR~~i~~V~Qdp--~LF~gTIreNL~~~~~--~~s----d~ei~~al~~~~l~-~~i~~lp~gldt~v~e~G~~LSgGQr 1030 (1139)
+|++++||+|+| .+|..|+.+|+.++.. ..+ ++++.++++.+++. ++.. ....+||||||
T Consensus 82 ~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~-----------~~~~~LSgGqk 150 (288)
T PRK13643 82 VRKKVGVVFQFPESQLFEETVLKDVAFGPQNFGIPKEKAEKIAAEKLEMVGLADEFWE-----------KSPFELSGGQM 150 (288)
T ss_pred HHhhEEEEecCcchhcccchHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCChhhcc-----------CCcccCCHHHH
Confidence 899999999998 7899999999987532 122 23466777787874 3332 23457999999
Q ss_pred HHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCE
Q 048639 1031 QRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGE 1109 (1139)
Q Consensus 1031 QrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ 1109 (1139)
||++|||||+.+|+||||||||++||+.+...+.+.|+++. +.++|||+|||+++.+.. ||||++|++|+
T Consensus 151 qrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~---------~~g~til~vtHd~~~~~~~~dri~~l~~G~ 221 (288)
T PRK13643 151 RRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIH---------QSGQTVVLVTHLMDDVADYADYVYLLEKGH 221 (288)
T ss_pred HHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHH---------HCCCEEEEEecCHHHHHHhCCEEEEEECCE
Confidence 99999999999999999999999999999999999998764 334569999999998865 99999999999
Q ss_pred EEEecChhHHhhc
Q 048639 1110 VVEMGSHSTLVAE 1122 (1139)
Q Consensus 1110 ive~G~~~eLl~~ 1122 (1139)
+++.|+++++..+
T Consensus 222 i~~~g~~~~~~~~ 234 (288)
T PRK13643 222 IISCGTPSDVFQE 234 (288)
T ss_pred EEEECCHHHHHcC
Confidence 9999999998753
No 190
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=1.3e-42 Score=373.58 Aligned_cols=204 Identities=32% Similarity=0.539 Sum_probs=176.8
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChH---HHhh
Q 048639 886 IEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLR---RLRS 962 (1139)
Q Consensus 886 I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~---~lR~ 962 (1139)
|+++||+++|++. ..++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+.. .+|+
T Consensus 2 l~~~~l~~~~~~~-~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (216)
T TIGR00960 2 IRFEQVSKAYPGG-HQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLRR 80 (216)
T ss_pred eEEEEEEEEecCC-CeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHHH
Confidence 7899999999632 23699999999999999999999999999999999999999999999999998776543 4788
Q ss_pred hceEEcccccccc-ccHHHHhccCC------CcCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHH
Q 048639 963 QIGLVQQEPLLFS-CSIRNNICYGN------EAASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAI 1035 (1139)
Q Consensus 963 ~i~~V~Qdp~LF~-gTIreNL~~~~------~~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlal 1035 (1139)
+++|+||+|.+|. .|++||+.++. +...++++.++++..++.++..+.| .+||||||||++|
T Consensus 81 ~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LSgG~~qrv~l 149 (216)
T TIGR00960 81 HIGMVFQDHRLLSDRTVYDNVAFPLRIIGVPPRDANERVSAALEKVGLEGKAHALP-----------MQLSGGEQQRVAI 149 (216)
T ss_pred hceEEecCccccccccHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCCh-----------hhCCHHHHHHHHH
Confidence 9999999999886 59999998641 1123456888899999877665443 4799999999999
Q ss_pred HHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEE
Q 048639 1036 ARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEV 1110 (1139)
Q Consensus 1036 ARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~i 1110 (1139)
||||+++|+||||||||++||+++.+.+.+.|++.. +.++|+|+|||+++.+.. ||+|++|++|+|
T Consensus 150 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~---------~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 150 ARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFN---------RRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred HHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHH---------HCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999999999998764 334569999999999976 999999999975
No 191
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=2.6e-42 Score=393.50 Aligned_cols=219 Identities=32% Similarity=0.527 Sum_probs=190.4
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhc
Q 048639 885 RIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQI 964 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i 964 (1139)
.|+++|++++|++ .++|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.+||.++...+. .|+++
T Consensus 2 ~L~i~~l~~~~~~---~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~i 76 (353)
T PRK10851 2 SIEIANIKKSFGR---TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHA--RDRKV 76 (353)
T ss_pred EEEEEEEEEEeCC---eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCH--HHCCE
Confidence 3889999999963 359999999999999999999999999999999999999999999999999987654 46789
Q ss_pred eEEcccccccc-ccHHHHhccCCC------cCC----HHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHH
Q 048639 965 GLVQQEPLLFS-CSIRNNICYGNE------AAS----EAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRI 1033 (1139)
Q Consensus 965 ~~V~Qdp~LF~-gTIreNL~~~~~------~~s----d~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl 1033 (1139)
+||+|++.+|. .|+++|+.++.. ..+ ++++.++++.+++.++.++.| ..||||||||+
T Consensus 77 ~~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----------~~LSgGq~QRv 145 (353)
T PRK10851 77 GFVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLADRYP-----------AQLSGGQKQRV 145 (353)
T ss_pred EEEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhhhCCh-----------hhCCHHHHHHH
Confidence 99999999997 599999987632 112 346778888888876655443 47999999999
Q ss_pred HHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEEE
Q 048639 1034 AIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVVE 1112 (1139)
Q Consensus 1034 alARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ive 1112 (1139)
+|||||+++|++||||||||+||+.+...+.+.|++... ..++|+|+|||+++.+.. ||||++|++|+|++
T Consensus 146 alArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~--------~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~ 217 (353)
T PRK10851 146 ALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHE--------ELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQ 217 (353)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHH--------hcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE
Confidence 999999999999999999999999999999999997641 224569999999999876 99999999999999
Q ss_pred ecChhHHhhccCChH
Q 048639 1113 MGSHSTLVAESQGVY 1127 (1139)
Q Consensus 1113 ~G~~~eLl~~~~g~f 1127 (1139)
.|+|+++++++...|
T Consensus 218 ~g~~~~i~~~p~~~~ 232 (353)
T PRK10851 218 AGTPDQVWREPATRF 232 (353)
T ss_pred EcCHHHHHhCccchH
Confidence 999999998765544
No 192
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-42 Score=392.97 Aligned_cols=220 Identities=34% Similarity=0.567 Sum_probs=187.5
Q ss_pred EEEEeEEEECCCCC-CCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHH---Hh
Q 048639 257 IDIRDVCFAYPSRP-DQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKS---LR 332 (1139)
Q Consensus 257 i~~~~v~~~y~~~~-~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~---~~ 332 (1139)
|+++|++++|++.. ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+..+ +|
T Consensus 2 i~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 81 (343)
T PRK11153 2 IELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKAR 81 (343)
T ss_pred EEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 78999999997311 356999999999999999999999999999999999999999999999999998776543 47
Q ss_pred cceEEEecCCCCCc-ccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHH
Q 048639 333 KNIGAVSQEPSLFT-GSLMDNIKVGNM--DADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARA 409 (1139)
Q Consensus 333 ~~i~~v~Q~~~l~~-~ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARa 409 (1139)
++|+||+|++.+|. .|++||+.++.. ..+.++.. ..+.+.++.+ |++......+.+||||||||++||||
T Consensus 82 ~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~~~~~-----~~~~~~l~~~--gL~~~~~~~~~~LSgGq~qRv~lAra 154 (343)
T PRK11153 82 RQIGMIFQHFNLLSSRTVFDNVALPLELAGTPKAEIK-----ARVTELLELV--GLSDKADRYPAQLSGGQKQRVAIARA 154 (343)
T ss_pred cCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCHHHHH-----HHHHHHHHHc--CCchhhhCChhhCCHHHHHHHHHHHH
Confidence 88999999999986 599999987532 12222221 1223445555 55555677788999999999999999
Q ss_pred HccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhcc
Q 048639 410 IVKNPPILLLDEATSALDSESEKLVQEALERAMQ--GRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQT 483 (1139)
Q Consensus 410 l~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 483 (1139)
|+.+|++|||||||++||+.+...+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 155 L~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~~~~~~~~ 231 (343)
T PRK11153 155 LASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLVEQGTVSEVFSH 231 (343)
T ss_pred HHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 9999999999999999999999999999988743 7899999999999876 999999999999999999998754
No 193
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.5e-42 Score=377.00 Aligned_cols=215 Identities=31% Similarity=0.524 Sum_probs=183.7
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhce
Q 048639 886 IEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQIG 965 (1139)
Q Consensus 886 I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~ 965 (1139)
|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+. .|++++
T Consensus 3 l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i~ 77 (239)
T cd03296 3 IEVRNVSKRFGD---FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPV--QERNVG 77 (239)
T ss_pred EEEEeEEEEECC---EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCc--cccceE
Confidence 789999999963 469999999999999999999999999999999999999999999999999876553 367899
Q ss_pred EEcccccccc-ccHHHHhccCCCc--C----C----HHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHH
Q 048639 966 LVQQEPLLFS-CSIRNNICYGNEA--A----S----EAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIA 1034 (1139)
Q Consensus 966 ~V~Qdp~LF~-gTIreNL~~~~~~--~----s----d~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrla 1034 (1139)
|+||+|.+|. .|+++|+.++... . . ++++.++++..++.++..+. ..+||||||||++
T Consensus 78 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrl~ 146 (239)
T cd03296 78 FVFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDWLADRY-----------PAQLSGGQRQRVA 146 (239)
T ss_pred EEecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChhhhhcC-----------hhhCCHHHHHHHH
Confidence 9999999885 6999999865211 1 1 23466777888776554432 3579999999999
Q ss_pred HHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEEEe
Q 048639 1035 IARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVVEM 1113 (1139)
Q Consensus 1035 lARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ive~ 1113 (1139)
|||||+++|++|||||||++||+++.+.+.+.|++... ..++|||++||+++.+.. ||+|++|++|++++.
T Consensus 147 la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--------~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~ 218 (239)
T cd03296 147 LARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHD--------ELHVTTVFVTHDQEEALEVADRVVVMNKGRIEQV 218 (239)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH--------HcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEe
Confidence 99999999999999999999999999999999987640 224569999999998765 999999999999999
Q ss_pred cChhHHhhccC
Q 048639 1114 GSHSTLVAESQ 1124 (1139)
Q Consensus 1114 G~~~eLl~~~~ 1124 (1139)
|+++++.+.++
T Consensus 219 ~~~~~~~~~~~ 229 (239)
T cd03296 219 GTPDEVYDHPA 229 (239)
T ss_pred cCHHHHhcCCC
Confidence 99999986533
No 194
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=1.4e-42 Score=394.42 Aligned_cols=205 Identities=30% Similarity=0.494 Sum_probs=178.1
Q ss_pred CccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHH----hcceEEEecCCCCCcc
Q 048639 272 QLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSL----RKNIGAVSQEPSLFTG 347 (1139)
Q Consensus 272 ~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~----~~~i~~v~Q~~~l~~~ 347 (1139)
+.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+..++ |++|+||+|++++|+.
T Consensus 6 ~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~~ 85 (363)
T TIGR01186 6 KKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFPH 85 (363)
T ss_pred ceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCCC
Confidence 459999999999999999999999999999999999999999999999999999888777 7899999999999975
Q ss_pred -cHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCC
Q 048639 348 -SLMDNIKVGNMD--ADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVKNPPILLLDEATS 424 (1139)
Q Consensus 348 -ti~~ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~~~~illlDEpts 424 (1139)
||+|||.++... .+.++..+ .+.+.++.+ |++...++.+.+|||||||||+|||||+.+|+|||||||||
T Consensus 86 ~TV~eNi~~~~~~~~~~~~~~~~-----~~~~~l~~v--gL~~~~~~~p~~LSGGq~QRV~lARAL~~~p~iLLlDEP~s 158 (363)
T TIGR01186 86 MTILQNTSLGPELLGWPEQERKE-----KALELLKLV--GLEEYEHRYPDELSGGMQQRVGLARALAAEPDILLMDEAFS 158 (363)
T ss_pred CCHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHhc--CCchhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcc
Confidence 999999986431 12222211 122344444 55566778888999999999999999999999999999999
Q ss_pred CCCHHhHHHHHHHHHHHc--CCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhcc
Q 048639 425 ALDSESEKLVQEALERAM--QGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQT 483 (1139)
Q Consensus 425 ~LD~~~~~~i~~~l~~~~--~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 483 (1139)
+||+.+++.+++.+.++. .++|+|+|||+++.+.. ||+|++|++|++++.|++++++.+
T Consensus 159 aLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei~~~ 220 (363)
T TIGR01186 159 ALDPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEILRN 220 (363)
T ss_pred cCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHHHhC
Confidence 999999999999998874 38999999999998765 999999999999999999999765
No 195
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.3e-42 Score=383.10 Aligned_cols=218 Identities=32% Similarity=0.567 Sum_probs=191.8
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhc
Q 048639 885 RIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQI 964 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i 964 (1139)
.|+++||+++|++. ..++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+...+++++
T Consensus 5 ~l~~~~l~~~~~~~-~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13635 5 IIRVEHISFRYPDA-ATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRRQV 83 (279)
T ss_pred eEEEEEEEEEeCCC-CccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhhhe
Confidence 38999999999642 34699999999999999999999999999999999999999999999999999988888888999
Q ss_pred eEEcccc--ccccccHHHHhccCCC--cCC----HHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHH
Q 048639 965 GLVQQEP--LLFSCSIRNNICYGNE--AAS----EAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIA 1036 (1139)
Q Consensus 965 ~~V~Qdp--~LF~gTIreNL~~~~~--~~s----d~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalA 1036 (1139)
+|+||+| .+++.|+++||.++.. ..+ ++++.++++.+++.+++...| ..||||||||++||
T Consensus 84 ~~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LS~G~~qrv~la 152 (279)
T PRK13635 84 GMVFQNPDNQFVGATVQDDVAFGLENIGVPREEMVERVDQALRQVGMEDFLNREP-----------HRLSGGQKQRVAIA 152 (279)
T ss_pred EEEEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHHHHHHHHHHcCChhhhhCCc-----------ccCCHHHHHHHHHH
Confidence 9999998 5667899999987521 112 345788888899988776654 37999999999999
Q ss_pred HHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhcCCEEEEEeCCEEEEecCh
Q 048639 1037 RTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVINSDVIVVMDKGEVVEMGSH 1116 (1139)
Q Consensus 1037 RALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~~DrI~vl~~G~ive~G~~ 1116 (1139)
|||+.+|+||||||||++||+.+...+.+.|++... ..++|+|++||+++.+..||||++|++|++++.|++
T Consensus 153 ral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~--------~~~~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~ 224 (279)
T PRK13635 153 GVLALQPDIIILDEATSMLDPRGRREVLETVRQLKE--------QKGITVLSITHDLDEAAQADRVIVMNKGEILEEGTP 224 (279)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH--------cCCCEEEEEecCHHHHHcCCEEEEEECCEEEEECCH
Confidence 999999999999999999999999999999997641 224669999999999988999999999999999999
Q ss_pred hHHhhc
Q 048639 1117 STLVAE 1122 (1139)
Q Consensus 1117 ~eLl~~ 1122 (1139)
+++.+.
T Consensus 225 ~~~~~~ 230 (279)
T PRK13635 225 EEIFKS 230 (279)
T ss_pred HHHhcC
Confidence 998753
No 196
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=6.4e-42 Score=365.46 Aligned_cols=204 Identities=40% Similarity=0.631 Sum_probs=181.5
Q ss_pred cccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhh
Q 048639 883 KGRIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRS 962 (1139)
Q Consensus 883 ~g~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~ 962 (1139)
.+.|+++|++++|+.. ..++|+|+||+|++||.+||+|+||||||||+++|+|+++|++|+|.+||.++...+...+|+
T Consensus 4 ~~~l~~~~l~~~~~~~-~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 82 (207)
T cd03369 4 HGEIEVENLSVRYAPD-LPPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPLEDLRS 82 (207)
T ss_pred CCeEEEEEEEEEeCCC-CcccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCHHHHHh
Confidence 4679999999999642 236999999999999999999999999999999999999999999999999998888888899
Q ss_pred hceEEccccccccccHHHHhccCCCcCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhcCC
Q 048639 963 QIGLVQQEPLLFSCSIRNNICYGNEAASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIARTLLKR 1042 (1139)
Q Consensus 963 ~i~~V~Qdp~LF~gTIreNL~~~~~~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalARALlr~ 1042 (1139)
+++||||+|.+|++|+++|+.+.. ..+++++.++++ +.+....|||||+||++||||++++
T Consensus 83 ~i~~v~q~~~~~~~tv~~~l~~~~-~~~~~~~~~~l~------------------~~~~~~~LS~G~~qrv~laral~~~ 143 (207)
T cd03369 83 SLTIIPQDPTLFSGTIRSNLDPFD-EYSDEEIYGALR------------------VSEGGLNLSQGQRQLLCLARALLKR 143 (207)
T ss_pred hEEEEecCCcccCccHHHHhcccC-CCCHHHHHHHhh------------------ccCCCCcCCHHHHHHHHHHHHHhhC
Confidence 999999999999999999998754 345555555544 2345678999999999999999999
Q ss_pred CCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhcCCEEEEEeCCEEEEecCh
Q 048639 1043 PAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVINSDVIVVMDKGEVVEMGSH 1116 (1139)
Q Consensus 1043 p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~~DrI~vl~~G~ive~G~~ 1116 (1139)
|++|||||||++||+++.+.+.+.|++.. . ++|+|++||+++.+..||++++|++|++++.|+|
T Consensus 144 p~llllDEP~~~LD~~~~~~l~~~l~~~~---------~-~~tiii~th~~~~~~~~d~v~~l~~g~i~~~g~~ 207 (207)
T cd03369 144 PRVLVLDEATASIDYATDALIQKTIREEF---------T-NSTILTIAHRLRTIIDYDKILVMDAGEVKEYDHP 207 (207)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHhc---------C-CCEEEEEeCCHHHHhhCCEEEEEECCEEEecCCC
Confidence 99999999999999999999999999764 3 3569999999999988999999999999999875
No 197
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.8e-42 Score=383.62 Aligned_cols=220 Identities=27% Similarity=0.499 Sum_probs=185.2
Q ss_pred EEEEeEEEECCCCC--CCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCC----CCHHH
Q 048639 257 IDIRDVCFAYPSRP--DQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKD----LDLKS 330 (1139)
Q Consensus 257 i~~~~v~~~y~~~~--~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~----~~~~~ 330 (1139)
|+++|++|+|+... .+++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||.++.. .+...
T Consensus 2 i~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 81 (288)
T PRK13643 2 IKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIKP 81 (288)
T ss_pred EEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHHH
Confidence 78999999997421 1359999999999999999999999999999999999999999999999999853 33556
Q ss_pred HhcceEEEecCC--CCCcccHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHHhCCCCCC-ccccccCCCCChHHHHHHH
Q 048639 331 LRKNIGAVSQEP--SLFTGSLMDNIKVGNMD--ADDEQIYNASMMANAHSFISQLPDQYS-TELGQRGVQLSGGQKQRIA 405 (1139)
Q Consensus 331 ~~~~i~~v~Q~~--~l~~~ti~~ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~i~~~g~~LSgGqkqRi~ 405 (1139)
+++.++||+|+| .+|..|+.||+.|+... .+.++... .+.+.++.+ |+. ......+.+||||||||++
T Consensus 82 ~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~L~~~~~~~~~~~LSgGqkqrva 154 (288)
T PRK13643 82 VRKKVGVVFQFPESQLFEETVLKDVAFGPQNFGIPKEKAEK-----IAAEKLEMV--GLADEFWEKSPFELSGGQMRRVA 154 (288)
T ss_pred HHhhEEEEecCcchhcccchHHHHHHhHHHHcCCCHHHHHH-----HHHHHHHHc--CCChhhccCCcccCCHHHHHHHH
Confidence 788999999998 78889999999987432 22222221 122344444 342 2456778899999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhcc
Q 048639 406 IARAIVKNPPILLLDEATSALDSESEKLVQEALERAM-QGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQT 483 (1139)
Q Consensus 406 lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 483 (1139)
|||||+.+|++|||||||++||+.+...+.+.++++. +++|+|++||+++.+.. ||+|++|++|+++++|+++++...
T Consensus 155 iA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 234 (288)
T PRK13643 155 IAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHIISCGTPSDVFQE 234 (288)
T ss_pred HHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHHcC
Confidence 9999999999999999999999999999999998875 48999999999998865 999999999999999999998654
No 198
>COG4615 PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.6e-40 Score=351.43 Aligned_cols=433 Identities=19% Similarity=0.232 Sum_probs=320.9
Q ss_pred HcCCcccccccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 21 IGGEVGAFDTDLSTGKVITGVSSHMSVIRDAIGEKLGHFLSSFATFFSGVLIAVICCWEVSLLIFLVVPMILVIGATYTK 100 (1139)
Q Consensus 21 l~~~~~~f~~~~~~G~l~~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~l~~l~~~~~~~~~~~~~~~ 100 (1139)
+.-|+..+++- ++++++.++++|+..|. +-...++.+.++.+.++++...+.|+++++.++..+.+.+..+...+...
T Consensus 92 l~tplerier~-~~~rlla~L~~Dvr~IS-f~~s~lp~~~qa~il~l~s~aYLayLSp~mf~l~vV~ivv~~~~~~~~m~ 169 (546)
T COG4615 92 LDTPLERIERL-GSARLLAGLTSDVRNIS-FAFSRLPELVQAIILTLGSAAYLAYLSPKMFLLTVVWIVVTIWGGFVLMA 169 (546)
T ss_pred hcCHHHHHHHh-cccchhhhhccccccee-ehHhhhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77899999985 89999999999999998 44455788999999999999999999999877777777777778888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 101 RMNAVSATKLLYLSEATSMIEQTISQIKTVFAFVGERSE--IKSFSDCMDKQIIISRGEALIKGVGLGMFQSVTFCCWAL 178 (1139)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (1139)
+..+.....++..+++.+..+..+.|.|..+...--.+. .+.|....+...+..............+.+.+.+....+
T Consensus 170 rv~k~~~aare~ed~Lq~~y~~il~G~KEL~l~r~R~~~~h~~~~~~~a~~~r~~~~~~n~f~~la~~~~ni~l~~lIGl 249 (546)
T COG4615 170 RVYKHMAAARETEDKLQNDYQTILEGRKELTLNRERAEYVHNNLYIPDAQEYRHHIIRANTFHLLAVNWSNIMLLGLIGL 249 (546)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHhcchhhheechHHHHHHHhhhcCcchHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 888989999999999999999999999999987543322 222322222222211111111111122222222223333
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccCCCCccccCCCccEE
Q 048639 179 IIWVGAVVVTAKRSTGGEVLAAVMSILFGAIALTYAAPDMQVFNQAKAAGFEIFQVIQRKPRISYSSKGKELEKIDGNID 258 (1139)
Q Consensus 179 ~~~~g~~~v~~~~l~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~~~~~~~~~~i~ 258 (1139)
++|+.... +.-+.....++.+.++++..|+.++...++.+..+.+++++|.++-..++...... +...++ -..|+
T Consensus 250 vf~lal~~---~w~st~~a~tivlvlLflr~pL~s~vgilP~l~~AqvA~~kiakle~~~~~a~~~~-~q~~p~-~~~le 324 (546)
T COG4615 250 VFWLALSL---GWASTNVAATIVLVLLFLRTPLLSAVGILPTLLTAQVAFNKIAKLELAPYKADFPR-PQAFPD-WKTLE 324 (546)
T ss_pred HHHHHHhh---ccchhhHHHHHHHHHHHHhhHHHHHHhhhhHHHHHHHHHHHHHHhhcCCccccCCC-CCcCCc-cccee
Confidence 33332211 22222344445566677788999999999999999999999998755433221111 111122 23699
Q ss_pred EEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcceEEE
Q 048639 259 IRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNIGAV 338 (1139)
Q Consensus 259 ~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v 338 (1139)
++||.|.|+.. ..-+..||++|++||+|-|+|.|||||||++++|.|+|.|++|+|++||++++.-++++.|+-++-|
T Consensus 325 lrnvrfay~~~--~FhvgPiNl~ikrGelvFliG~NGsGKST~~~LLtGL~~PqsG~I~ldg~pV~~e~ledYR~LfSav 402 (546)
T COG4615 325 LRNVRFAYQDN--AFHVGPINLTIKRGELVFLIGGNGSGKSTLAMLLTGLYQPQSGEILLDGKPVSAEQLEDYRKLFSAV 402 (546)
T ss_pred eeeeeeccCcc--cceecceeeEEecCcEEEEECCCCCcHHHHHHHHhcccCCCCCceeECCccCCCCCHHHHHHHHHHH
Confidence 99999999743 3578999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCcccHHHHHhcCCCC-CCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHccCCCEE
Q 048639 339 SQEPSLFTGSLMDNIKVGNMD-ADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVKNPPIL 417 (1139)
Q Consensus 339 ~Q~~~l~~~ti~~ni~~g~~~-~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~~~~il 417 (1139)
+-|.|||+.++ |.+. ++.+.+..-+..-.+... ..+.+|- =....||-|||.|+|+--|++-+.||+
T Consensus 403 FsDyhLF~~ll------~~e~~as~q~i~~~LqrLel~~k-tsl~d~~-----fs~~kLStGQkKRlAll~AllEeR~Il 470 (546)
T COG4615 403 FSDYHLFDQLL------GPEGKASPQLIEKWLQRLELAHK-TSLNDGR-----FSNLKLSTGQKKRLALLLALLEERDIL 470 (546)
T ss_pred hhhHhhhHhhh------CCccCCChHHHHHHHHHHHHhhh-hcccCCc-----ccccccccchHHHHHHHHHHHhhCCeE
Confidence 99999998654 2222 444444333322221111 1122211 012479999999999999999999999
Q ss_pred EEeCCCCCCCHHhHHHHHHHHHHHc--CCCeEEEEecCccchhccCEEEEEeCcEEEEe
Q 048639 418 LLDEATSALDSESEKLVQEALERAM--QGRTVILIAHRMSTIVNADMIAVVEDGQVTET 474 (1139)
Q Consensus 418 llDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~ 474 (1139)
+|||=-+--||.=++.+.+.+.... .||||+.||||-.....|||++.|++|+++|.
T Consensus 471 v~DEWAADQDPaFRR~FY~~lLp~LK~qGKTI~aIsHDd~YF~~ADrll~~~~G~~~e~ 529 (546)
T COG4615 471 VLDEWAADQDPAFRREFYQVLLPLLKEQGKTIFAISHDDHYFIHADRLLEMRNGQLSEL 529 (546)
T ss_pred EeehhhccCChHHHHHHHHHHhHHHHHhCCeEEEEecCchhhhhHHHHHHHhcCceeec
Confidence 9999999999999999888775533 49999999999999999999999999999875
No 199
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.2e-42 Score=377.41 Aligned_cols=214 Identities=36% Similarity=0.565 Sum_probs=183.7
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCC---hHHHhh
Q 048639 886 IEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYN---LRRLRS 962 (1139)
Q Consensus 886 I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~---l~~lR~ 962 (1139)
|+++||+++|++ +.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ...+|+
T Consensus 1 l~~~~l~~~~~~--~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 78 (241)
T cd03256 1 IEVENLSKTYPN--GKKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLRR 78 (241)
T ss_pred CEEeeEEEecCC--ccEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHHh
Confidence 478999999964 146999999999999999999999999999999999999999999999999998876 456788
Q ss_pred hceEEcccccccc-ccHHHHhccCCC--------------cCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCCh
Q 048639 963 QIGLVQQEPLLFS-CSIRNNICYGNE--------------AASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSG 1027 (1139)
Q Consensus 963 ~i~~V~Qdp~LF~-gTIreNL~~~~~--------------~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSg 1027 (1139)
+++|+||++.+|. .|+++|+.++.. ...++++.++++..++.+... ..+.+|||
T Consensus 79 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~ 147 (241)
T cd03256 79 QIGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLDKAY-----------QRADQLSG 147 (241)
T ss_pred ccEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChhhhC-----------CCcccCCH
Confidence 9999999998886 699999976421 112345667777777755432 33467999
Q ss_pred HHHHHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEe
Q 048639 1028 GQKQRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMD 1106 (1139)
Q Consensus 1028 GQrQrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~ 1106 (1139)
|||||++|||||+++|+||||||||++||+.+...+.+.|++... +.++|+|+|||+++.+.. ||+|++|+
T Consensus 148 G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--------~~~~tii~~tH~~~~~~~~~d~v~~l~ 219 (241)
T cd03256 148 GQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINR--------EEGITVIVSLHQVDLAREYADRIVGLK 219 (241)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHH--------hcCCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 999999999999999999999999999999999999999997640 224569999999999985 99999999
Q ss_pred CCEEEEecChhHHh
Q 048639 1107 KGEVVEMGSHSTLV 1120 (1139)
Q Consensus 1107 ~G~ive~G~~~eLl 1120 (1139)
+|++++.|+++++.
T Consensus 220 ~G~i~~~~~~~~~~ 233 (241)
T cd03256 220 DGRIVFDGPPAELT 233 (241)
T ss_pred CCEEEeecCHHHhh
Confidence 99999999999974
No 200
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=6e-42 Score=375.97 Aligned_cols=223 Identities=35% Similarity=0.525 Sum_probs=189.8
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCC-----ccEEEECCcccCCC--ChH
Q 048639 886 IEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPN-----EGIILIDGKGIKEY--NLR 958 (1139)
Q Consensus 886 I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~-----~G~I~idG~di~~~--~l~ 958 (1139)
|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++... +..
T Consensus 2 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~ 78 (247)
T TIGR00972 2 IEIENLNLFYGE---KEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVV 78 (247)
T ss_pred EEEEEEEEEECC---eeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchH
Confidence 789999999963 35999999999999999999999999999999999999998 99999999998763 455
Q ss_pred HHhhhceEEccccccccccHHHHhccCCC-------cCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHH
Q 048639 959 RLRSQIGLVQQEPLLFSCSIRNNICYGNE-------AASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQ 1031 (1139)
Q Consensus 959 ~lR~~i~~V~Qdp~LF~gTIreNL~~~~~-------~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQ 1031 (1139)
.+|++++|+||++.+|..|+++|+.++.. ...++++.++++.+++.+++.. .......+|||||||
T Consensus 79 ~~~~~i~~v~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LSgG~~q 151 (247)
T TIGR00972 79 ELRRRVGMVFQKPNPFPMSIYDNIAYGPRLHGIKDKKELDEIVEESLKKAALWDEVKD-------RLHDSALGLSGGQQQ 151 (247)
T ss_pred HHHhheEEEecCcccCCCCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCcchhh-------HhhCCcccCCHHHHH
Confidence 67889999999999999999999986321 1123467788888888744321 122334579999999
Q ss_pred HHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEE
Q 048639 1032 RIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEV 1110 (1139)
Q Consensus 1032 rlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~i 1110 (1139)
|++|||||+++|++|||||||++||+.+...+.+.|++.. ++ +|+|+|||+++.+.. ||+|++|++|++
T Consensus 152 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~---------~~-~tiiivsH~~~~~~~~~d~i~~l~~G~i 221 (247)
T TIGR00972 152 RLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELK---------KK-YTIVIVTHNMQQAARISDRTAFFYDGEL 221 (247)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHH---------hc-CeEEEEecCHHHHHHhCCEEEEEECCEE
Confidence 9999999999999999999999999999999999999764 33 569999999999876 999999999999
Q ss_pred EEecChhHHhhccCChHH
Q 048639 1111 VEMGSHSTLVAESQGVYS 1128 (1139)
Q Consensus 1111 ve~G~~~eLl~~~~g~f~ 1128 (1139)
++.|+++++++++...+.
T Consensus 222 ~~~~~~~~~~~~~~~~~~ 239 (247)
T TIGR00972 222 VEYGPTEQIFTNPKEKRT 239 (247)
T ss_pred EEeCCHHHHHhCCCChHH
Confidence 999999999865545443
No 201
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=2.9e-42 Score=393.46 Aligned_cols=222 Identities=29% Similarity=0.468 Sum_probs=192.9
Q ss_pred cccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCc--cEEEECCcccCCCChHHH
Q 048639 883 KGRIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNE--GIILIDGKGIKEYNLRRL 960 (1139)
Q Consensus 883 ~g~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~--G~I~idG~di~~~~l~~l 960 (1139)
.|.|+++||+++|++ .++|+|+||+|++||.++|+||||||||||+++|.|+++|++ |+|.+||.++...+. .
T Consensus 3 ~~~l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~--~ 77 (362)
T TIGR03258 3 CGGIRIDHLRVAYGA---NTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPP--H 77 (362)
T ss_pred ceEEEEEEEEEEECC---eEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCH--H
Confidence 367999999999963 369999999999999999999999999999999999999999 999999999987665 4
Q ss_pred hhhceEEccccccccc-cHHHHhccCCC--cCC----HHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHH
Q 048639 961 RSQIGLVQQEPLLFSC-SIRNNICYGNE--AAS----EAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRI 1033 (1139)
Q Consensus 961 R~~i~~V~Qdp~LF~g-TIreNL~~~~~--~~s----d~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl 1033 (1139)
+++++||+|++.+|.. |+++||.++.. ..+ ++++.++++.++|.++.++.| .+||||||||+
T Consensus 78 ~r~ig~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~~v~~~l~~~gL~~~~~~~~-----------~~LSgGq~QRv 146 (362)
T TIGR03258 78 KRGLALLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAERVADALKLVGLGDAAAHLP-----------AQLSGGMQQRI 146 (362)
T ss_pred HCCEEEEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCchhhCCh-----------hhCCHHHHHHH
Confidence 6789999999999965 99999987531 122 345778888888887766554 47999999999
Q ss_pred HHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEEE
Q 048639 1034 AIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVVE 1112 (1139)
Q Consensus 1034 alARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ive 1112 (1139)
+|||||+++|++||||||||+||+.+...+.+.|++... ..+++|+|+|||+++.+.. ||||+||++|++++
T Consensus 147 aLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~-------~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~ 219 (362)
T TIGR03258 147 AIARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHE-------ELPELTILCVTHDQDDALTLADKAGIMKDGRLAA 219 (362)
T ss_pred HHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHH-------hCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE
Confidence 999999999999999999999999999999999987641 1114569999999999866 99999999999999
Q ss_pred ecChhHHhhccCChH
Q 048639 1113 MGSHSTLVAESQGVY 1127 (1139)
Q Consensus 1113 ~G~~~eLl~~~~g~f 1127 (1139)
.|+|+++.+++...|
T Consensus 220 ~g~~~~~~~~p~~~~ 234 (362)
T TIGR03258 220 HGEPQALYDAPADGF 234 (362)
T ss_pred EcCHHHHHhCcCcHH
Confidence 999999998766555
No 202
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=2.9e-42 Score=376.33 Aligned_cols=214 Identities=27% Similarity=0.509 Sum_probs=181.9
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHH-hhhc
Q 048639 886 IEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRL-RSQI 964 (1139)
Q Consensus 886 I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~l-R~~i 964 (1139)
|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+ |+++
T Consensus 1 l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (236)
T cd03219 1 LEVRGLTKRFGG---LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLGI 77 (236)
T ss_pred CeeeeeEEEECC---EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcCE
Confidence 478999999963 469999999999999999999999999999999999999999999999999988876654 5679
Q ss_pred eEEccccccccc-cHHHHhccCCCcC----------------CHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCCh
Q 048639 965 GLVQQEPLLFSC-SIRNNICYGNEAA----------------SEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSG 1027 (1139)
Q Consensus 965 ~~V~Qdp~LF~g-TIreNL~~~~~~~----------------sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSg 1027 (1139)
+|+||+|.+|.+ |+++|+.++.... ..+++.++++..++.+ ........|||
T Consensus 78 ~~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LSg 146 (236)
T cd03219 78 GRTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLAD-----------LADRPAGELSY 146 (236)
T ss_pred EEEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCccc-----------hhhCChhhCCH
Confidence 999999999986 9999998653211 1223445555555433 23344567999
Q ss_pred HHHHHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEe
Q 048639 1028 GQKQRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMD 1106 (1139)
Q Consensus 1028 GQrQrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~ 1106 (1139)
|||||++|||||+++|++|||||||++||+.+.+.+.+.|++.. +.++|+|++||+++.+.. ||+|++|+
T Consensus 147 G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~---------~~~~tii~vsH~~~~~~~~~d~i~~l~ 217 (236)
T cd03219 147 GQQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELR---------ERGITVLLVEHDMDVVMSLADRVTVLD 217 (236)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHH---------HCCCEEEEEecCHHHHHHhCCEEEEEe
Confidence 99999999999999999999999999999999999999998764 234569999999999976 99999999
Q ss_pred CCEEEEecChhHHhhc
Q 048639 1107 KGEVVEMGSHSTLVAE 1122 (1139)
Q Consensus 1107 ~G~ive~G~~~eLl~~ 1122 (1139)
+|++++.|++++++++
T Consensus 218 ~G~i~~~~~~~~~~~~ 233 (236)
T cd03219 218 QGRVIAEGTPDEVRNN 233 (236)
T ss_pred CCEEEeecCHHHhccC
Confidence 9999999999998754
No 203
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.9e-42 Score=378.33 Aligned_cols=224 Identities=35% Similarity=0.479 Sum_probs=190.7
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccC-----CccEEEECCcccCC--CCh
Q 048639 885 RIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDP-----NEGIILIDGKGIKE--YNL 957 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~~--~~l 957 (1139)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+.
T Consensus 7 ~l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 83 (254)
T PRK14273 7 IIETENLNLFYTD---FKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDI 83 (254)
T ss_pred eEEEeeeEEEeCC---ceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccH
Confidence 5999999999963 3599999999999999999999999999999999999997 48999999998863 345
Q ss_pred HHHhhhceEEccccccccccHHHHhccCCCc-------CCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHH
Q 048639 958 RRLRSQIGLVQQEPLLFSCSIRNNICYGNEA-------ASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQK 1030 (1139)
Q Consensus 958 ~~lR~~i~~V~Qdp~LF~gTIreNL~~~~~~-------~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQr 1030 (1139)
..+|++++|+||++.+|..|++||+.++... ..++++.++++.+++.+.+ ++.+++. ..+||||||
T Consensus 84 ~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l---~~~~~~~----~~~LSgG~~ 156 (254)
T PRK14273 84 LELRRKIGMVFQTPNPFLMSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNEV---KDKLNTN----ALSLSGGQQ 156 (254)
T ss_pred HHHhhceEEEeeccccccCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchhh---HHHHhCC----cccCCHHHH
Confidence 5678899999999999999999999865210 1245677888888875443 2334443 467999999
Q ss_pred HHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCE
Q 048639 1031 QRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGE 1109 (1139)
Q Consensus 1031 QrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ 1109 (1139)
||++|||||+++|++|||||||++||+.+...+.+.|++.. . ++|+|+|||+++.+.. ||||++|++|+
T Consensus 157 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~---------~-~~tvii~sH~~~~~~~~~d~i~~l~~G~ 226 (254)
T PRK14273 157 QRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLK---------E-SYTIIIVTHNMQQAGRISDRTAFFLNGC 226 (254)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHh---------c-CCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 99999999999999999999999999999999999999864 3 3569999999999866 99999999999
Q ss_pred EEEecChhHHhhccCChHH
Q 048639 1110 VVEMGSHSTLVAESQGVYS 1128 (1139)
Q Consensus 1110 ive~G~~~eLl~~~~g~f~ 1128 (1139)
+++.|+++++.+++.-.|.
T Consensus 227 i~~~g~~~~~~~~~~~~~~ 245 (254)
T PRK14273 227 IEEESSTDELFFNPKNTKT 245 (254)
T ss_pred EEEeCCHHHHHhCCCChHH
Confidence 9999999999876554443
No 204
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.1e-42 Score=382.77 Aligned_cols=221 Identities=29% Similarity=0.544 Sum_probs=187.4
Q ss_pred EEEEeEEEECCCCC--CCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCC----CHHH
Q 048639 257 IDIRDVCFAYPSRP--DQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDL----DLKS 330 (1139)
Q Consensus 257 i~~~~v~~~y~~~~--~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~----~~~~ 330 (1139)
++++|++|+|++.. .+++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||+++... +...
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (286)
T PRK13646 3 IRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIRP 82 (286)
T ss_pred EEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 78999999996422 24699999999999999999999999999999999999999999999999998653 3456
Q ss_pred HhcceEEEecCC--CCCcccHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHHhCCCCCCc-cccccCCCCChHHHHHHH
Q 048639 331 LRKNIGAVSQEP--SLFTGSLMDNIKVGNMD--ADDEQIYNASMMANAHSFISQLPDQYST-ELGQRGVQLSGGQKQRIA 405 (1139)
Q Consensus 331 ~~~~i~~v~Q~~--~l~~~ti~~ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t-~i~~~g~~LSgGqkqRi~ 405 (1139)
+|++||||||+| .+|+.|+.|||.++... .+.++..+ .+.+.++.+ |+++ .....+.+||||||||++
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~-----~~~~~l~~~--gL~~~~~~~~~~~LSgGq~qrv~ 155 (286)
T PRK13646 83 VRKRIGMVFQFPESQLFEDTVEREIIFGPKNFKMNLDEVKN-----YAHRLLMDL--GFSRDVMSQSPFQMSGGQMRKIA 155 (286)
T ss_pred HHhheEEEecChHhccchhhHHHHHHhhHHHcCCCHHHHHH-----HHHHHHHHc--CCChhhhhCCcccCCHHHHHHHH
Confidence 788999999997 58888999999986321 22222222 123455555 6653 456788999999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhc
Q 048639 406 IARAIVKNPPILLLDEATSALDSESEKLVQEALERAM--QGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQ 482 (1139)
Q Consensus 406 lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 482 (1139)
|||||+.+|+++||||||++||+.+...+.+.++++. .|+|+|+|||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 156 laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 235 (286)
T PRK13646 156 IVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIVSQTSPKELFK 235 (286)
T ss_pred HHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 9999999999999999999999999999999999874 48999999999999865 99999999999999999998876
Q ss_pred cc
Q 048639 483 TS 484 (1139)
Q Consensus 483 ~~ 484 (1139)
..
T Consensus 236 ~~ 237 (286)
T PRK13646 236 DK 237 (286)
T ss_pred CH
Confidence 43
No 205
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.1e-42 Score=381.87 Aligned_cols=221 Identities=30% Similarity=0.484 Sum_probs=187.5
Q ss_pred EEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHH----hh
Q 048639 887 EFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRL----RS 962 (1139)
Q Consensus 887 ~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~l----R~ 962 (1139)
.++||+++|.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+ ++
T Consensus 26 ~~~~~~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~ 102 (269)
T cd03294 26 SKEEILKKTGQ---TVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRK 102 (269)
T ss_pred hhhhhhhhcCC---ceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcC
Confidence 45677777752 468999999999999999999999999999999999999999999999999988765543 46
Q ss_pred hceEEcccccccc-ccHHHHhccCCC------cCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHH
Q 048639 963 QIGLVQQEPLLFS-CSIRNNICYGNE------AASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAI 1035 (1139)
Q Consensus 963 ~i~~V~Qdp~LF~-gTIreNL~~~~~------~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlal 1035 (1139)
+++|+||++.+|. .|+++|+.++.. ...++++.++++.+++.+++...| .+||||||||++|
T Consensus 103 ~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~Gq~qrv~l 171 (269)
T cd03294 103 KISMVFQSFALLPHRTVLENVAFGLEVQGVPRAEREERAAEALELVGLEGWEHKYP-----------DELSGGMQQRVGL 171 (269)
T ss_pred cEEEEecCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCCc-----------ccCCHHHHHHHHH
Confidence 7999999999884 699999976311 112356778899999887766554 3699999999999
Q ss_pred HHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEEEec
Q 048639 1036 ARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVVEMG 1114 (1139)
Q Consensus 1036 ARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ive~G 1114 (1139)
||||+++|+||||||||++||+.+.+.+.+.|++... ..++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 172 Aral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~--------~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g 243 (269)
T cd03294 172 ARALAVDPDILLMDEAFSALDPLIRREMQDELLRLQA--------ELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVG 243 (269)
T ss_pred HHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHH--------hcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeC
Confidence 9999999999999999999999999999999987641 224569999999999865 9999999999999999
Q ss_pred ChhHHhhccCChHHH
Q 048639 1115 SHSTLVAESQGVYSR 1129 (1139)
Q Consensus 1115 ~~~eLl~~~~g~f~~ 1129 (1139)
+++++++++...|.+
T Consensus 244 ~~~~~~~~~~~~~~~ 258 (269)
T cd03294 244 TPEEILTNPANDYVR 258 (269)
T ss_pred CHHHHHhCcCcHHHH
Confidence 999998765555544
No 206
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.3e-42 Score=381.70 Aligned_cols=221 Identities=32% Similarity=0.519 Sum_probs=185.3
Q ss_pred EEEEeEEEECCCCC--CCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCC----CCHHH
Q 048639 257 IDIRDVCFAYPSRP--DQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKD----LDLKS 330 (1139)
Q Consensus 257 i~~~~v~~~y~~~~--~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~----~~~~~ 330 (1139)
++++|++|+|++.. ..++|+||||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++.. .+...
T Consensus 3 l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (290)
T PRK13634 3 ITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLKP 82 (290)
T ss_pred EEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 78999999997421 1469999999999999999999999999999999999999999999999999853 34556
Q ss_pred HhcceEEEecCC--CCCcccHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHHhCCCCCC-ccccccCCCCChHHHHHHH
Q 048639 331 LRKNIGAVSQEP--SLFTGSLMDNIKVGNMD--ADDEQIYNASMMANAHSFISQLPDQYS-TELGQRGVQLSGGQKQRIA 405 (1139)
Q Consensus 331 ~~~~i~~v~Q~~--~l~~~ti~~ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~i~~~g~~LSgGqkqRi~ 405 (1139)
.++.|+||+|+| .+|+.|++|||.++... .+.++..+ .+.+.++.+ |+. ......+.+||||||||++
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~-----~~~~~l~~~--gL~~~~~~~~~~~LSgGq~qrv~ 155 (290)
T PRK13634 83 LRKKVGIVFQFPEHQLFEETVEKDICFGPMNFGVSEEDAKQ-----KAREMIELV--GLPEELLARSPFELSGGQMRRVA 155 (290)
T ss_pred HHhhEEEEeeCchhhhhhhhHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHC--CCChhhhhCCcccCCHHHHHHHH
Confidence 778999999998 68888999999986321 22332221 122344544 443 2346678899999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhc
Q 048639 406 IARAIVKNPPILLLDEATSALDSESEKLVQEALERAMQ--GRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQ 482 (1139)
Q Consensus 406 lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 482 (1139)
|||||+.+|++|||||||++||+.+...+.+.++++.+ |.|||++||+++.+.. ||||++|++|++++.|+++++.+
T Consensus 156 lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~~~g~~~~~~~ 235 (290)
T PRK13634 156 IAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGTVFLQGTPREIFA 235 (290)
T ss_pred HHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHhc
Confidence 99999999999999999999999999999999988743 8999999999999865 99999999999999999998865
Q ss_pred cc
Q 048639 483 TS 484 (1139)
Q Consensus 483 ~~ 484 (1139)
..
T Consensus 236 ~~ 237 (290)
T PRK13634 236 DP 237 (290)
T ss_pred CH
Confidence 43
No 207
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.9e-42 Score=381.37 Aligned_cols=219 Identities=32% Similarity=0.542 Sum_probs=190.5
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhc
Q 048639 885 RIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQI 964 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i 964 (1139)
-|+++||+++|++....++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+...+|+++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~i 83 (277)
T PRK13642 4 ILEVENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRKI 83 (277)
T ss_pred eEEEEEEEEEcCCCCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcce
Confidence 48999999999743234699999999999999999999999999999999999999999999999999888888889999
Q ss_pred eEEcccc--ccccccHHHHhccCCC--cCCH----HHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHH
Q 048639 965 GLVQQEP--LLFSCSIRNNICYGNE--AASE----AEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIA 1036 (1139)
Q Consensus 965 ~~V~Qdp--~LF~gTIreNL~~~~~--~~sd----~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalA 1036 (1139)
+|+||+| .++..|+.+||.++.. ..++ +++.++++.+++.++.... ...||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrv~lA 152 (277)
T PRK13642 84 GMVFQNPDNQFVGATVEDDVAFGMENQGIPREEMIKRVDEALLAVNMLDFKTRE-----------PARLSGGQKQRVAVA 152 (277)
T ss_pred EEEEECHHHhhccCCHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHhHhhCC-----------cccCCHHHHHHHHHH
Confidence 9999998 4778899999986421 2233 3457788888887765442 357999999999999
Q ss_pred HHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhcCCEEEEEeCCEEEEecCh
Q 048639 1037 RTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVINSDVIVVMDKGEVVEMGSH 1116 (1139)
Q Consensus 1037 RALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~~DrI~vl~~G~ive~G~~ 1116 (1139)
|||+++|+||||||||++||+.+.+.+.+.|++... ..++|+|+|||+++.+..||+|++|++|++++.|++
T Consensus 153 raL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~--------~~g~tiil~sH~~~~~~~~d~i~~l~~G~i~~~g~~ 224 (277)
T PRK13642 153 GIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKE--------KYQLTVLSITHDLDEAASSDRILVMKAGEIIKEAAP 224 (277)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH--------hcCCEEEEEeCCHHHHHhCCEEEEEECCEEEEeCCH
Confidence 999999999999999999999999999999987640 224569999999999988999999999999999999
Q ss_pred hHHhhc
Q 048639 1117 STLVAE 1122 (1139)
Q Consensus 1117 ~eLl~~ 1122 (1139)
+++++.
T Consensus 225 ~~~~~~ 230 (277)
T PRK13642 225 SELFAT 230 (277)
T ss_pred HHHhcC
Confidence 998854
No 208
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=5.4e-42 Score=392.50 Aligned_cols=219 Identities=32% Similarity=0.549 Sum_probs=192.7
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhc
Q 048639 885 RIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQI 964 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i 964 (1139)
.|+++|++++|++ .++|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.+||.++..++.. ++++
T Consensus 14 ~L~l~~l~~~~~~---~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 88 (375)
T PRK09452 14 LVELRGISKSFDG---KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAE--NRHV 88 (375)
T ss_pred eEEEEEEEEEECC---eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 4999999999963 4589999999999999999999999999999999999999999999999999877654 5789
Q ss_pred eEEccccccccc-cHHHHhccCCC--cCC----HHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHH
Q 048639 965 GLVQQEPLLFSC-SIRNNICYGNE--AAS----EAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIAR 1037 (1139)
Q Consensus 965 ~~V~Qdp~LF~g-TIreNL~~~~~--~~s----d~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalAR 1037 (1139)
+||+|++.+|.. |++|||.++.. ..+ ++++.++++..++.++.++.| .+||||||||++|||
T Consensus 89 g~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~p-----------~~LSgGq~QRVaLAR 157 (375)
T PRK09452 89 NTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLEEFAQRKP-----------HQLSGGQQQRVAIAR 157 (375)
T ss_pred EEEecCcccCCCCCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhhCCh-----------hhCCHHHHHHHHHHH
Confidence 999999999965 99999987632 112 346788899999988777665 479999999999999
Q ss_pred HhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEEEecCh
Q 048639 1038 TLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVVEMGSH 1116 (1139)
Q Consensus 1038 ALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~ 1116 (1139)
||+++|++||||||||+||..+...+.+.|++... ..++|+|+|||+++.+.. ||||++|++|+|++.|+|
T Consensus 158 aL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~--------~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~ 229 (375)
T PRK09452 158 AVVNKPKVLLLDESLSALDYKLRKQMQNELKALQR--------KLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTP 229 (375)
T ss_pred HHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH--------hcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCH
Confidence 99999999999999999999999999999997651 124569999999999765 999999999999999999
Q ss_pred hHHhhccCChH
Q 048639 1117 STLVAESQGVY 1127 (1139)
Q Consensus 1117 ~eLl~~~~g~f 1127 (1139)
+++++++...|
T Consensus 230 ~~i~~~p~~~~ 240 (375)
T PRK09452 230 REIYEEPKNLF 240 (375)
T ss_pred HHHHhCcccHH
Confidence 99998776555
No 209
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.9e-42 Score=373.65 Aligned_cols=218 Identities=33% Similarity=0.517 Sum_probs=186.4
Q ss_pred EEEEeEEEECCCCC-CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChH---HHh
Q 048639 886 IEFQNIKFNYPSRP-EVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLR---RLR 961 (1139)
Q Consensus 886 I~~~nvsf~Y~~~~-~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~---~lR 961 (1139)
|+++|++++|+++. ..++|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.+||.++...+.. .+|
T Consensus 2 i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (233)
T cd03258 2 IELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKAR 81 (233)
T ss_pred eEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHH
Confidence 78999999996431 12699999999999999999999999999999999999999999999999999877654 357
Q ss_pred hhceEEcccccccc-ccHHHHhccCCC--cC----CHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHH
Q 048639 962 SQIGLVQQEPLLFS-CSIRNNICYGNE--AA----SEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIA 1034 (1139)
Q Consensus 962 ~~i~~V~Qdp~LF~-gTIreNL~~~~~--~~----sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrla 1034 (1139)
++++|+||+|.+|. .|++||+.++.. .. .++++.++++..++.+...+. ..+||||||||++
T Consensus 82 ~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrv~ 150 (233)
T cd03258 82 RRIGMIFQHFNLLSSRTVFENVALPLEIAGVPKAEIEERVLELLELVGLEDKADAY-----------PAQLSGGQKQRVG 150 (233)
T ss_pred hheEEEccCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhhhhcC-----------hhhCCHHHHHHHH
Confidence 88999999999997 699999976421 11 234677888888887655443 3579999999999
Q ss_pred HHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEEEe
Q 048639 1035 IARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVVEM 1113 (1139)
Q Consensus 1035 lARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ive~ 1113 (1139)
|||||+++|++|||||||++||+.+...+.+.|++... ..++|+|++||+++.+.. ||+|++|++|++++.
T Consensus 151 la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~--------~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~ 222 (233)
T cd03258 151 IARALANNPKVLLCDEATSALDPETTQSILALLRDINR--------ELGLTIVLITHEMEVVKRICDRVAVMEKGEVVEE 222 (233)
T ss_pred HHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHH--------HcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEe
Confidence 99999999999999999999999999999999987640 224569999999999876 999999999999999
Q ss_pred cChhHHhhc
Q 048639 1114 GSHSTLVAE 1122 (1139)
Q Consensus 1114 G~~~eLl~~ 1122 (1139)
|+++++.++
T Consensus 223 ~~~~~~~~~ 231 (233)
T cd03258 223 GTVEEVFAN 231 (233)
T ss_pred cCHHHHhcC
Confidence 999998754
No 210
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.4e-42 Score=376.89 Aligned_cols=220 Identities=34% Similarity=0.534 Sum_probs=188.7
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccc-----CCccEEEECCcccCC--CCh
Q 048639 885 RIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYD-----PNEGIILIDGKGIKE--YNL 957 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~-----p~~G~I~idG~di~~--~~l 957 (1139)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+.
T Consensus 6 ~l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 82 (253)
T PRK14242 6 KMEARGLSFFYGD---FQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDV 82 (253)
T ss_pred EEEEeeeEEEECC---eeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCH
Confidence 4999999999963 359999999999999999999999999999999999975 589999999999875 345
Q ss_pred HHHhhhceEEccccccccccHHHHhccCCC-------cCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHH
Q 048639 958 RRLRSQIGLVQQEPLLFSCSIRNNICYGNE-------AASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQK 1030 (1139)
Q Consensus 958 ~~lR~~i~~V~Qdp~LF~gTIreNL~~~~~-------~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQr 1030 (1139)
..+|++++|+||++.+|..|+++|+.++.. ...++++.++++.+++.+++.. .......+||||||
T Consensus 83 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LSgGq~ 155 (253)
T PRK14242 83 VELRRRVGMVFQKPNPFPKSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDEVKD-------RLHESALGLSGGQQ 155 (253)
T ss_pred HHHhhcEEEEecCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchhhhH-------HhhCCcccCCHHHH
Confidence 578899999999999999999999986421 1124567788888888655432 22344568999999
Q ss_pred HHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCE
Q 048639 1031 QRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGE 1109 (1139)
Q Consensus 1031 QrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ 1109 (1139)
||++|||||+++|+||||||||++||+.+.+.+.+.|++.. .+ +|||++||+++.+.. ||+|++|++|+
T Consensus 156 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~---------~~-~tvii~tH~~~~~~~~~d~v~~l~~G~ 225 (253)
T PRK14242 156 QRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELK---------AR-YTIIIVTHNMQQAARVSDVTAFFYMGK 225 (253)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh---------cC-CeEEEEEecHHHHHHhCCEEEEEECCE
Confidence 99999999999999999999999999999999999999764 33 469999999999865 99999999999
Q ss_pred EEEecChhHHhhccC
Q 048639 1110 VVEMGSHSTLVAESQ 1124 (1139)
Q Consensus 1110 ive~G~~~eLl~~~~ 1124 (1139)
+++.|+++++.+.+.
T Consensus 226 i~~~g~~~~~~~~~~ 240 (253)
T PRK14242 226 LIEVGPTEQIFTRPR 240 (253)
T ss_pred EEEeCCHHHHHcCCC
Confidence 999999999986543
No 211
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.1e-42 Score=376.11 Aligned_cols=219 Identities=32% Similarity=0.497 Sum_probs=184.0
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccC---CCccEEEECCccCCCCCHHHHh
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYD---PSNGDILIDSLNIKDLDLKSLR 332 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~---~~~G~i~~~g~~~~~~~~~~~~ 332 (1139)
.|+++|+++.|++ +++|+|+||++++||+++|+||||||||||+++|+|+++ |++|+|.++|+++.+.+....+
T Consensus 2 ~~~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~ 78 (246)
T PRK14269 2 IAKTTNLNLFYGK---KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALR 78 (246)
T ss_pred ceeeeeeEEEECC---EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHh
Confidence 3789999999963 469999999999999999999999999999999999984 6999999999999887777788
Q ss_pred cceEEEecCCCCCcccHHHHHhcCCCC--C--CHHHHHHHHHHhcHHHHHHhC--CCCCCccccccCCCCChHHHHHHHH
Q 048639 333 KNIGAVSQEPSLFTGSLMDNIKVGNMD--A--DDEQIYNASMMANAHSFISQL--PDQYSTELGQRGVQLSGGQKQRIAI 406 (1139)
Q Consensus 333 ~~i~~v~Q~~~l~~~ti~~ni~~g~~~--~--~~~~~~~~~~~~~~~~~i~~l--~~g~~t~i~~~g~~LSgGqkqRi~l 406 (1139)
+.++|+||++.+|+.|++||+.++... . ..++. ...+.+.++.+ +..+.+...+.+.+||||||||++|
T Consensus 79 ~~i~~~~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~-----~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~l 153 (246)
T PRK14269 79 KNVGMVFQQPNVFVKSIYENISYAPKLHGMIKNKDEE-----EALVVDCLQKVGLFEEVKDKLKQNALALSGGQQQRLCI 153 (246)
T ss_pred hhEEEEecCCccccccHHHHhhhHHhhcCcccChHHH-----HHHHHHHHHHcCCChhhhHHhcCCcccCCHHHHHHHHH
Confidence 899999999999999999999876311 0 00111 01112233332 1111233566788999999999999
Q ss_pred HHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhc
Q 048639 407 ARAIVKNPPILLLDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQ 482 (1139)
Q Consensus 407 ARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 482 (1139)
||||+++|+++||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++..
T Consensus 154 aral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 230 (246)
T PRK14269 154 ARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGELIEFGESKEFFE 230 (246)
T ss_pred HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhCcEEEEEECCEEEEECCHHHHHh
Confidence 99999999999999999999999999999999988778999999999998865 99999999999999999998864
No 212
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=6.5e-42 Score=391.82 Aligned_cols=217 Identities=30% Similarity=0.547 Sum_probs=184.1
Q ss_pred ccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcc
Q 048639 255 GNIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKN 334 (1139)
Q Consensus 255 ~~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~ 334 (1139)
..++++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...++. ++.
T Consensus 13 ~~L~l~~l~~~~~~---~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~ 87 (375)
T PRK09452 13 PLVELRGISKSFDG---KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAE--NRH 87 (375)
T ss_pred ceEEEEEEEEEECC---eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHH--HCC
Confidence 35999999999963 4599999999999999999999999999999999999999999999999999876654 468
Q ss_pred eEEEecCCCCCcc-cHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHc
Q 048639 335 IGAVSQEPSLFTG-SLMDNIKVGNMD--ADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIV 411 (1139)
Q Consensus 335 i~~v~Q~~~l~~~-ti~~ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~ 411 (1139)
|+||+|++.+|+. ||+|||.|+... ....+..+ .+.+.++.+ |+.......+.+|||||||||+|||||+
T Consensus 88 ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~p~~LSgGq~QRVaLARaL~ 160 (375)
T PRK09452 88 VNTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITP-----RVMEALRMV--QLEEFAQRKPHQLSGGQQQRVAIARAVV 160 (375)
T ss_pred EEEEecCcccCCCCCHHHHHHHHHhhcCCCHHHHHH-----HHHHHHHHc--CCchhhhCChhhCCHHHHHHHHHHHHHh
Confidence 9999999999965 999999987421 12222111 112233333 4444556667799999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhcc
Q 048639 412 KNPPILLLDEATSALDSESEKLVQEALERAMQ--GRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQT 483 (1139)
Q Consensus 412 ~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 483 (1139)
.+|++||||||||+||+.++..+.+.|+++.+ +.|+|+|||+++.+.. ||+|++|++|+|++.|+++++..+
T Consensus 161 ~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~i~~~ 235 (375)
T PRK09452 161 NKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYEE 235 (375)
T ss_pred cCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 99999999999999999999999999988753 7999999999999765 999999999999999999998764
No 213
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=6.6e-42 Score=387.28 Aligned_cols=226 Identities=27% Similarity=0.414 Sum_probs=189.8
Q ss_pred cEEEEeEEEECCCCC----------CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCC
Q 048639 885 RIEFQNIKFNYPSRP----------EVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKE 954 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~----------~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~ 954 (1139)
-|+++||+++|+.+. ..++++|+||+|++||.+||+|+||||||||+++|+|+++|++|+|.+||.++.+
T Consensus 8 ~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i~~ 87 (331)
T PRK15079 8 LLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKDLLG 87 (331)
T ss_pred eEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEECCc
Confidence 489999999996321 2469999999999999999999999999999999999999999999999999998
Q ss_pred CChH---HHhhhceEEcccc--ccc-cccHHHHhccC----CCcCC----HHHHHHHHHHcCchH-HHhhCCCCcccccc
Q 048639 955 YNLR---RLRSQIGLVQQEP--LLF-SCSIRNNICYG----NEAAS----EAEIVEVSKKANIHD-FISSLPDGYDTVVG 1019 (1139)
Q Consensus 955 ~~l~---~lR~~i~~V~Qdp--~LF-~gTIreNL~~~----~~~~s----d~ei~~al~~~~l~~-~i~~lp~gldt~v~ 1019 (1139)
++.. .+|++++||+|+| .|| ..||.+|+.++ .+..+ ++.+.++++.+++.+ ...+
T Consensus 88 ~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~~~~~~~~~~~~~~~l~~vgl~~~~~~~---------- 157 (331)
T PRK15079 88 MKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQEVKDRVKAMMLKVGLLPNLINR---------- 157 (331)
T ss_pred CCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHHhcC----------
Confidence 8754 4678899999999 467 57999998642 11123 234566778887732 3222
Q ss_pred CCCCCCChHHHHHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-
Q 048639 1020 EKGCQLSGGQKQRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN- 1098 (1139)
Q Consensus 1020 e~G~~LSgGQrQrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~- 1098 (1139)
...+||||||||++|||||+.+|++||+||||++||..+...|.+.|+++.. ..++|+|+|||+++.+..
T Consensus 158 -~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~--------~~~~til~iTHdl~~~~~~ 228 (331)
T PRK15079 158 -YPHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQR--------EMGLSLIFIAHDLAVVKHI 228 (331)
T ss_pred -CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHH--------HcCCEEEEEeCCHHHHHHh
Confidence 3357999999999999999999999999999999999999999999987641 224569999999999986
Q ss_pred CCEEEEEeCCEEEEecChhHHhhccCChHHH
Q 048639 1099 SDVIVVMDKGEVVEMGSHSTLVAESQGVYSR 1129 (1139)
Q Consensus 1099 ~DrI~vl~~G~ive~G~~~eLl~~~~g~f~~ 1129 (1139)
||||+||++|+|+|.|+++++++++...|.+
T Consensus 229 ~dri~vl~~G~ive~g~~~~i~~~~~~py~~ 259 (331)
T PRK15079 229 SDRVLVMYLGHAVELGTYDEVYHNPLHPYTK 259 (331)
T ss_pred CCEEEEEECCEEEEEcCHHHHHcCCCCHHHH
Confidence 9999999999999999999999776666655
No 214
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=3.1e-41 Score=373.14 Aligned_cols=220 Identities=31% Similarity=0.468 Sum_probs=194.1
Q ss_pred ccccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHh
Q 048639 882 IKGRIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLR 961 (1139)
Q Consensus 882 ~~g~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR 961 (1139)
..+.|+++|+++.. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||
T Consensus 36 ~~~~l~i~nls~~~-----~~vL~~vs~~i~~Ge~~~liG~NGsGKSTLl~~I~Gl~~p~~G~I~i~g------------ 98 (282)
T cd03291 36 DDNNLFFSNLCLVG-----APVLKNINLKIEKGEMLAITGSTGSGKTSLLMLILGELEPSEGKIKHSG------------ 98 (282)
T ss_pred CCCeEEEEEEEEec-----ccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECC------------
Confidence 34579999999952 3599999999999999999999999999999999999999999999998
Q ss_pred hhceEEccccccccccHHHHhccCCCcCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhcC
Q 048639 962 SQIGLVQQEPLLFSCSIRNNICYGNEAASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIARTLLK 1041 (1139)
Q Consensus 962 ~~i~~V~Qdp~LF~gTIreNL~~~~~~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalARALlr 1041 (1139)
+++|+||++.+|++|+++|+.++.. ..+.++.++++.+++.+.+..+|.++++.+++.+.+||||||||++|||||++
T Consensus 99 -~i~yv~q~~~l~~~tv~enl~~~~~-~~~~~~~~~l~~~~l~~~l~~~~~~~~~~~~~~~~~LSgGq~qrv~lAraL~~ 176 (282)
T cd03291 99 -RISFSSQFSWIMPGTIKENIIFGVS-YDEYRYKSVVKACQLEEDITKFPEKDNTVLGEGGITLSGGQRARISLARAVYK 176 (282)
T ss_pred -EEEEEeCcccccccCHHHHhhcccc-cCHHHHHHHHHHhCCHHHHHhccccccceecCCCCcCCHHHHHHHHHHHHHhc
Confidence 3999999999999999999987532 34456777888899999999999999999999999999999999999999999
Q ss_pred CCCEEEeeccccCCCHHHHHHHHHHH-HhhCCCCCCccccCCCeEEEEEecCchhhhcCCEEEEEeCCEEEEecChhHHh
Q 048639 1042 RPAIMLLDEATSALDAESERVIVSAL-EALNPKSSSCGELASRTTQITVAHRLATVINSDVIVVMDKGEVVEMGSHSTLV 1120 (1139)
Q Consensus 1042 ~p~ILlLDEaTS~LD~~te~~I~~~l-~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~~DrI~vl~~G~ive~G~~~eLl 1120 (1139)
+|+||||||||++||+++...+.+.+ ++.. . ++|+|+|||+++.+..||+|++|++|++++.|+++++.
T Consensus 177 ~p~iLiLDEPt~gLD~~~~~~l~~~ll~~~~---------~-~~tIiiisH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 246 (282)
T cd03291 177 DADLYLLDSPFGYLDVFTEKEIFESCVCKLM---------A-NKTRILVTSKMEHLKKADKILILHEGSSYFYGTFSELQ 246 (282)
T ss_pred CCCEEEEECCCccCCHHHHHHHHHHHHHHhh---------C-CCEEEEEeCChHHHHhCCEEEEEECCEEEEECCHHHHH
Confidence 99999999999999999999888754 4432 2 34699999999999889999999999999999999998
Q ss_pred hccCChHHHHH
Q 048639 1121 AESQGVYSRLY 1131 (1139)
Q Consensus 1121 ~~~~g~f~~l~ 1131 (1139)
+. ...|.+.+
T Consensus 247 ~~-~~~~~~~~ 256 (282)
T cd03291 247 SL-RPDFSSKL 256 (282)
T ss_pred hc-chHHHHHH
Confidence 64 44555443
No 215
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=8.4e-42 Score=363.66 Aligned_cols=201 Identities=38% Similarity=0.567 Sum_probs=181.5
Q ss_pred EEEEeEEEECCCCCC--cccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhh
Q 048639 886 IEFQNIKFNYPSRPE--VTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQ 963 (1139)
Q Consensus 886 I~~~nvsf~Y~~~~~--~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~ 963 (1139)
|+++||+++|++..+ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+|| +
T Consensus 1 l~~~~l~~~~~~~~~~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G~i~~~g-------------~ 67 (204)
T cd03250 1 ISVEDASFTWDSGEQETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSVSVPG-------------S 67 (204)
T ss_pred CEEeEEEEecCCCCccccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCCeEEEcC-------------E
Confidence 579999999964311 3699999999999999999999999999999999999999999999999 6
Q ss_pred ceEEccccccccccHHHHhccCCCcCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhcCCC
Q 048639 964 IGLVQQEPLLFSCSIRNNICYGNEAASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIARTLLKRP 1043 (1139)
Q Consensus 964 i~~V~Qdp~LF~gTIreNL~~~~~~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalARALlr~p 1043 (1139)
++|+||+|.+|++|+++|+.++. ..++++.+++++.+++.+++..+|.|+++.+.+.+..||+|||||++|||||+++|
T Consensus 68 i~~~~q~~~l~~~t~~enl~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~lS~G~~qrv~laral~~~p 146 (204)
T cd03250 68 IAYVSQEPWIQNGTIRENILFGK-PFDEERYEKVIKACALEPDLEILPDGDLTEIGEKGINLSGGQKQRISLARAVYSDA 146 (204)
T ss_pred EEEEecCchhccCcHHHHhccCC-CcCHHHHHHHHHHcCcHHHHHhccCcccceecCCCCcCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999864 34566788889999999999999999999999999999999999999999999999
Q ss_pred CEEEeeccccCCCHHHHHHHHH-HHHhhCCCCCCccccCCCeEEEEEecCchhhhcCCEEEEEeCCE
Q 048639 1044 AIMLLDEATSALDAESERVIVS-ALEALNPKSSSCGELASRTTQITVAHRLATVINSDVIVVMDKGE 1109 (1139)
Q Consensus 1044 ~ILlLDEaTS~LD~~te~~I~~-~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~~DrI~vl~~G~ 1109 (1139)
+++||||||++||+++.+.+.+ .+++.. ++++|||++||+++.+..||+|++|++|+
T Consensus 147 ~llllDEP~~~LD~~~~~~l~~~ll~~~~---------~~~~tvi~~sh~~~~~~~~d~i~~l~~G~ 204 (204)
T cd03250 147 DIYLLDDPLSAVDAHVGRHIFENCILGLL---------LNNKTRILVTHQLQLLPHADQIVVLDNGR 204 (204)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHHhc---------cCCCEEEEEeCCHHHHhhCCEEEEEeCCC
Confidence 9999999999999999888877 456543 33456999999999998899999999985
No 216
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.7e-42 Score=384.11 Aligned_cols=219 Identities=31% Similarity=0.526 Sum_probs=184.9
Q ss_pred EEEEeEEEECCCCC--CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCC----CChHH
Q 048639 886 IEFQNIKFNYPSRP--EVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKE----YNLRR 959 (1139)
Q Consensus 886 I~~~nvsf~Y~~~~--~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~----~~l~~ 959 (1139)
|+++||+++|++.. ..++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .+...
T Consensus 3 l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (290)
T PRK13634 3 ITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLKP 82 (290)
T ss_pred EEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 78999999996421 1469999999999999999999999999999999999999999999999999863 34567
Q ss_pred HhhhceEEcccc--ccccccHHHHhccCCC--cCCH----HHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHH
Q 048639 960 LRSQIGLVQQEP--LLFSCSIRNNICYGNE--AASE----AEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQ 1031 (1139)
Q Consensus 960 lR~~i~~V~Qdp--~LF~gTIreNL~~~~~--~~sd----~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQ 1031 (1139)
+|++++||||+| .+|+.|+++|+.++.. ..+. +++.++++.++|.+.+ .+ .....|||||||
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~------~~----~~~~~LSgGq~q 152 (290)
T PRK13634 83 LRKKVGIVFQFPEHQLFEETVEKDICFGPMNFGVSEEDAKQKAREMIELVGLPEEL------LA----RSPFELSGGQMR 152 (290)
T ss_pred HHhhEEEEeeCchhhhhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCChhh------hh----CCcccCCHHHHH
Confidence 888999999998 6888999999986521 1222 3466777788875222 12 234579999999
Q ss_pred HHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEE
Q 048639 1032 RIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEV 1110 (1139)
Q Consensus 1032 rlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~i 1110 (1139)
|++|||||+.+|++|||||||++||+.+...+.+.|++... ..++|||+|||+++.+.. ||||++|++|++
T Consensus 153 rv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~--------~~g~tviiitHd~~~~~~~~drv~~l~~G~i 224 (290)
T PRK13634 153 RVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHK--------EKGLTTVLVTHSMEDAARYADQIVVMHKGTV 224 (290)
T ss_pred HHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHH--------hcCCEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 99999999999999999999999999999999999987641 224569999999999865 999999999999
Q ss_pred EEecChhHHhhc
Q 048639 1111 VEMGSHSTLVAE 1122 (1139)
Q Consensus 1111 ve~G~~~eLl~~ 1122 (1139)
++.|+++++.+.
T Consensus 225 ~~~g~~~~~~~~ 236 (290)
T PRK13634 225 FLQGTPREIFAD 236 (290)
T ss_pred EEECCHHHHhcC
Confidence 999999998754
No 217
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6e-42 Score=374.80 Aligned_cols=218 Identities=30% Similarity=0.520 Sum_probs=186.4
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhce
Q 048639 886 IEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQIG 965 (1139)
Q Consensus 886 I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~ 965 (1139)
++++||+++|++. .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 1 l~~~~l~~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 78 (242)
T cd03295 1 IEFENVTKRYGGG--KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKIG 78 (242)
T ss_pred CEEEEEEEEeCCc--ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcceE
Confidence 4789999999641 45999999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEcccccccc-ccHHHHhccCCC--cC----CHHHHHHHHHHcCchH--HHhhCCCCccccccCCCCCCChHHHHHHHHH
Q 048639 966 LVQQEPLLFS-CSIRNNICYGNE--AA----SEAEIVEVSKKANIHD--FISSLPDGYDTVVGEKGCQLSGGQKQRIAIA 1036 (1139)
Q Consensus 966 ~V~Qdp~LF~-gTIreNL~~~~~--~~----sd~ei~~al~~~~l~~--~i~~lp~gldt~v~e~G~~LSgGQrQrlalA 1036 (1139)
|+||+|.+|. .|+++|+.++.. .. .++++.++++..++.+ +. ...+.+||||||||++||
T Consensus 79 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~-----------~~~~~~LS~G~~qrv~la 147 (242)
T cd03295 79 YVIQQIGLFPHMTVEENIALVPKLLKWPKEKIRERADELLALVGLDPAEFA-----------DRYPHELSGGQQQRVGVA 147 (242)
T ss_pred EEccCccccCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcHHHH-----------hcChhhCCHHHHHHHHHH
Confidence 9999999985 699999976421 11 1345667777777753 22 233467999999999999
Q ss_pred HHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEEEecC
Q 048639 1037 RTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVVEMGS 1115 (1139)
Q Consensus 1037 RALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~ 1115 (1139)
|||+++|++|||||||++||+.+.+.+.+.|++... ..++|+|++||+++.+.. ||+|++|++|++++.|+
T Consensus 148 ral~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~--------~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~ 219 (242)
T cd03295 148 RALAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQ--------ELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGT 219 (242)
T ss_pred HHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHH--------HcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecC
Confidence 999999999999999999999999999999997641 224569999999998765 99999999999999999
Q ss_pred hhHHhhccC
Q 048639 1116 HSTLVAESQ 1124 (1139)
Q Consensus 1116 ~~eLl~~~~ 1124 (1139)
++++.+++.
T Consensus 220 ~~~~~~~~~ 228 (242)
T cd03295 220 PDEILRSPA 228 (242)
T ss_pred HHHHHcCCC
Confidence 999976533
No 218
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.3e-42 Score=383.40 Aligned_cols=217 Identities=26% Similarity=0.469 Sum_probs=184.4
Q ss_pred EEEEeEEEECCCCC--CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCC---------
Q 048639 886 IEFQNIKFNYPSRP--EVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKE--------- 954 (1139)
Q Consensus 886 I~~~nvsf~Y~~~~--~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~--------- 954 (1139)
|+++||+++|++.. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..
T Consensus 3 i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (305)
T PRK13651 3 IKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKEK 82 (305)
T ss_pred EEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceecccccccccccc
Confidence 88999999997432 1369999999999999999999999999999999999999999999999887632
Q ss_pred ---------------CChHHHhhhceEEcccc--ccccccHHHHhccCCC--cCC----HHHHHHHHHHcCch-HHHhhC
Q 048639 955 ---------------YNLRRLRSQIGLVQQEP--LLFSCSIRNNICYGNE--AAS----EAEIVEVSKKANIH-DFISSL 1010 (1139)
Q Consensus 955 ---------------~~l~~lR~~i~~V~Qdp--~LF~gTIreNL~~~~~--~~s----d~ei~~al~~~~l~-~~i~~l 1010 (1139)
.+...+|++++||||+| .+|..|+++||.++.. ..+ ++++.++++.+++. ++.+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~-- 160 (305)
T PRK13651 83 VLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSKEEAKKRAAKYIELVGLDESYLQ-- 160 (305)
T ss_pred cccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChhhhh--
Confidence 13457889999999986 6888999999987531 122 34567788888875 3433
Q ss_pred CCCccccccCCCCCCChHHHHHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEe
Q 048639 1011 PDGYDTVVGEKGCQLSGGQKQRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVA 1090 (1139)
Q Consensus 1011 p~gldt~v~e~G~~LSgGQrQrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~Ia 1090 (1139)
....+||||||||++|||||+.+|++|||||||++||+.+.+.+.+.|+++. ..++|||+||
T Consensus 161 ---------~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~---------~~g~tiiivt 222 (305)
T PRK13651 161 ---------RSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLN---------KQGKTIILVT 222 (305)
T ss_pred ---------CChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHH---------HCCCEEEEEe
Confidence 2345799999999999999999999999999999999999999999998764 3345699999
Q ss_pred cCchhhhc-CCEEEEEeCCEEEEecChhHHhhc
Q 048639 1091 HRLATVIN-SDVIVVMDKGEVVEMGSHSTLVAE 1122 (1139)
Q Consensus 1091 Hrl~ti~~-~DrI~vl~~G~ive~G~~~eLl~~ 1122 (1139)
|+++.+.. ||||++|++|++++.|+++++.++
T Consensus 223 Hd~~~~~~~adrv~vl~~G~i~~~g~~~~~~~~ 255 (305)
T PRK13651 223 HDLDNVLEWTKRTIFFKDGKIIKDGDTYDILSD 255 (305)
T ss_pred eCHHHHHHhCCEEEEEECCEEEEECCHHHHhcC
Confidence 99998765 999999999999999999998764
No 219
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=6.4e-42 Score=390.36 Aligned_cols=216 Identities=31% Similarity=0.509 Sum_probs=184.5
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcce
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNI 335 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 335 (1139)
.|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.+||+++...++ .+++|
T Consensus 2 ~L~i~~l~~~~~~---~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~i 76 (353)
T PRK10851 2 SIEIANIKKSFGR---TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHA--RDRKV 76 (353)
T ss_pred EEEEEEEEEEeCC---eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCH--HHCCE
Confidence 3789999999963 459999999999999999999999999999999999999999999999999976554 35689
Q ss_pred EEEecCCCCCcc-cHHHHHhcCCCC------CCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHH
Q 048639 336 GAVSQEPSLFTG-SLMDNIKVGNMD------ADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIAR 408 (1139)
Q Consensus 336 ~~v~Q~~~l~~~-ti~~ni~~g~~~------~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lAR 408 (1139)
+||+|++.+|+. |++||+.++... .+.++.. ..+.+.++.+ |+.......+.+||||||||++|||
T Consensus 77 ~~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~L~~~~~~~~~~LSgGq~QRvalAr 149 (353)
T PRK10851 77 GFVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIK-----AKVTQLLEMV--QLAHLADRYPAQLSGGQKQRVALAR 149 (353)
T ss_pred EEEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHH-----HHHHHHHHHc--CCchhhhCChhhCCHHHHHHHHHHH
Confidence 999999999975 999999987431 1222211 1223344444 4445566778899999999999999
Q ss_pred HHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhcc
Q 048639 409 AIVKNPPILLLDEATSALDSESEKLVQEALERAMQ--GRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQT 483 (1139)
Q Consensus 409 al~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 483 (1139)
||+.+|++||||||||+||+.++..+.+.|+++.+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++..+
T Consensus 150 AL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~~~~i~~~ 227 (353)
T PRK10851 150 ALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGTPDQVWRE 227 (353)
T ss_pred HHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 99999999999999999999999999999988753 7899999999999876 999999999999999999998764
No 220
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-41 Score=376.14 Aligned_cols=222 Identities=34% Similarity=0.556 Sum_probs=190.1
Q ss_pred cccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccc-----CCccEEEECCcccCC--C
Q 048639 883 KGRIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYD-----PNEGIILIDGKGIKE--Y 955 (1139)
Q Consensus 883 ~g~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~-----p~~G~I~idG~di~~--~ 955 (1139)
.+.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .
T Consensus 11 ~~~l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~ 87 (260)
T PRK10744 11 PSKIQVRNLNFYYGK---FHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQ 87 (260)
T ss_pred CceEEEEEEEEEeCC---eEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEcccccc
Confidence 457999999999963 369999999999999999999999999999999999986 479999999999863 4
Q ss_pred ChHHHhhhceEEccccccccccHHHHhccCCC---cCC----HHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChH
Q 048639 956 NLRRLRSQIGLVQQEPLLFSCSIRNNICYGNE---AAS----EAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGG 1028 (1139)
Q Consensus 956 ~l~~lR~~i~~V~Qdp~LF~gTIreNL~~~~~---~~s----d~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgG 1028 (1139)
+...+|++++|+||+|.+|+.|+++|+.++.. ..+ +++++++++.+++.+.+. ....+...+||||
T Consensus 88 ~~~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G 160 (260)
T PRK10744 88 DIALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAALWNEVK-------DKLHQSGYSLSGG 160 (260)
T ss_pred chHHHhcceEEEecCCccCcCcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcCCChhhH-------HHHhcCCCCCCHH
Confidence 56678999999999999999999999986421 112 346778888888754332 2233455689999
Q ss_pred HHHHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeC
Q 048639 1029 QKQRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDK 1107 (1139)
Q Consensus 1029 QrQrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~ 1107 (1139)
||||++|||||+++|+||||||||++||+.+.+.+.+.|++.. . ++|+|++||+++.+.. ||+|++|++
T Consensus 161 q~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~---------~-~~tiii~sH~~~~~~~~~d~i~~l~~ 230 (260)
T PRK10744 161 QQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELK---------Q-DYTVVIVTHNMQQAARCSDYTAFMYL 230 (260)
T ss_pred HHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHh---------c-CCeEEEEeCCHHHHHHhCCEEEEEEC
Confidence 9999999999999999999999999999999999999999764 3 3469999999999865 999999999
Q ss_pred CEEEEecChhHHhhccC
Q 048639 1108 GEVVEMGSHSTLVAESQ 1124 (1139)
Q Consensus 1108 G~ive~G~~~eLl~~~~ 1124 (1139)
|++++.|+++++.+.+.
T Consensus 231 G~i~~~g~~~~~~~~~~ 247 (260)
T PRK10744 231 GELIEFGNTDTIFTKPA 247 (260)
T ss_pred CEEEEeCCHHHHHhCCC
Confidence 99999999999986543
No 221
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=6e-42 Score=375.59 Aligned_cols=214 Identities=33% Similarity=0.536 Sum_probs=183.1
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCCh---HHHhh
Q 048639 886 IEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNL---RRLRS 962 (1139)
Q Consensus 886 I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l---~~lR~ 962 (1139)
|+++||+++|+. +.++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++..++. ..+|+
T Consensus 2 l~~~~l~~~~~~--~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (243)
T TIGR02315 2 LEVENLSKVYPN--GKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLRR 79 (243)
T ss_pred eEEEeeeeecCC--CcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHHh
Confidence 689999999961 2469999999999999999999999999999999999999999999999999887654 34788
Q ss_pred hceEEcccccccc-ccHHHHhccCCC--------------cCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCCh
Q 048639 963 QIGLVQQEPLLFS-CSIRNNICYGNE--------------AASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSG 1027 (1139)
Q Consensus 963 ~i~~V~Qdp~LF~-gTIreNL~~~~~--------------~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSg 1027 (1139)
+++|+||++.+|. .|+++|+.++.. ...++++.++++..++.++... ...+|||
T Consensus 80 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LSg 148 (243)
T TIGR02315 80 RIGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADKAYQ-----------RADQLSG 148 (243)
T ss_pred heEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhhhcC-----------CcccCCH
Confidence 9999999998886 699999976421 1123456777777777655432 3457999
Q ss_pred HHHHHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEe
Q 048639 1028 GQKQRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMD 1106 (1139)
Q Consensus 1028 GQrQrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~ 1106 (1139)
|||||++|||||+++|++|||||||++||+++.+.+.+.|++... ..++|+|++||+++.+.+ ||+|++|+
T Consensus 149 G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--------~~~~tiii~tH~~~~~~~~~d~v~~l~ 220 (243)
T TIGR02315 149 GQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINK--------EDGITVIINLHQVDLAKKYADRIVGLK 220 (243)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH--------HcCCEEEEEeCCHHHHHHhcCeEEEEE
Confidence 999999999999999999999999999999999999999987640 224569999999999865 99999999
Q ss_pred CCEEEEecChhHHh
Q 048639 1107 KGEVVEMGSHSTLV 1120 (1139)
Q Consensus 1107 ~G~ive~G~~~eLl 1120 (1139)
+|++++.|+++++.
T Consensus 221 ~G~i~~~~~~~~~~ 234 (243)
T TIGR02315 221 AGEIVFDGAPSELD 234 (243)
T ss_pred CCEEEecCCHHHhC
Confidence 99999999999974
No 222
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-41 Score=371.72 Aligned_cols=216 Identities=36% Similarity=0.597 Sum_probs=185.5
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcce
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNI 335 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 335 (1139)
.++++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.+
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 79 (241)
T PRK14250 3 EIEFKEVSYSSFG---KEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRKI 79 (241)
T ss_pred eEEEEeEEEEeCC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhcE
Confidence 4899999999963 4599999999999999999999999999999999999999999999999998877777788899
Q ss_pred EEEecCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCCC-ccccccCCCCChHHHHHHHHHHHHccCC
Q 048639 336 GAVSQEPSLFTGSLMDNIKVGNMDADDEQIYNASMMANAHSFISQLPDQYS-TELGQRGVQLSGGQKQRIAIARAIVKNP 414 (1139)
Q Consensus 336 ~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~i~~~g~~LSgGqkqRi~lARal~~~~ 414 (1139)
+|++|++.+|+.|++||+.++....... ...+.+.++.+ |++ ......+.+||||||||++||||++.+|
T Consensus 80 ~~~~q~~~~~~~tv~e~l~~~~~~~~~~-------~~~~~~~l~~~--~l~~~~~~~~~~~LS~G~~qrl~la~al~~~p 150 (241)
T PRK14250 80 GMVFQQPHLFEGTVKDNIEYGPMLKGEK-------NVDVEYYLSIV--GLNKEYATRDVKNLSGGEAQRVSIARTLANNP 150 (241)
T ss_pred EEEecCchhchhhHHHHHhcchhhcCcH-------HHHHHHHHHHc--CCCHHHhhCCcccCCHHHHHHHHHHHHHhcCC
Confidence 9999999999999999998764211111 01122344444 333 2345678899999999999999999999
Q ss_pred CEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhcc
Q 048639 415 PILLLDEATSALDSESEKLVQEALERAM--QGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQT 483 (1139)
Q Consensus 415 ~illlDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 483 (1139)
+++||||||++||+.+.+.+.+.|+++. .|+|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 151 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 222 (241)
T PRK14250 151 EVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKTYDFFTN 222 (241)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCHHHHhcC
Confidence 9999999999999999999999998864 38999999999999875 999999999999999999998754
No 223
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3e-42 Score=369.93 Aligned_cols=205 Identities=36% Similarity=0.618 Sum_probs=176.0
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhce
Q 048639 886 IEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQIG 965 (1139)
Q Consensus 886 I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~ 965 (1139)
|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ..+++++
T Consensus 1 l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~--~~~~~i~ 75 (213)
T cd03259 1 LELKGLSKTYGS---VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVP--PERRNIG 75 (213)
T ss_pred CeeeeeEEEeCC---eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCc--hhhccEE
Confidence 478999999963 46999999999999999999999999999999999999999999999999987654 3567899
Q ss_pred EEcccccccc-ccHHHHhccCCCc------CCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 048639 966 LVQQEPLLFS-CSIRNNICYGNEA------ASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIART 1038 (1139)
Q Consensus 966 ~V~Qdp~LF~-gTIreNL~~~~~~------~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalARA 1038 (1139)
|+||+|.+|. .|+++|+.++... ..++++.++++..++.++..+.| .+||||||||++||||
T Consensus 76 ~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LSgG~~qrl~la~a 144 (213)
T cd03259 76 MVFQDYALFPHLTVAENIAFGLKLRGVPKAEIRARVRELLELVGLEGLLNRYP-----------HELSGGQQQRVALARA 144 (213)
T ss_pred EEcCchhhccCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhhhhcCh-----------hhCCHHHHHHHHHHHH
Confidence 9999998885 6999999864211 12345777888888876654433 4799999999999999
Q ss_pred hcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEEEec
Q 048639 1039 LLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVVEMG 1114 (1139)
Q Consensus 1039 Llr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ive~G 1114 (1139)
|+++|++|||||||++||+++...+.+.|++... +.++|||++||+++.+.+ ||+|++|++|++++.|
T Consensus 145 l~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~--------~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 145 LAREPSLLLLDEPLSALDAKLREELREELKELQR--------ELGITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH--------HcCCEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 9999999999999999999999999999987640 224569999999998876 9999999999999876
No 224
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=5.9e-42 Score=390.91 Aligned_cols=217 Identities=30% Similarity=0.493 Sum_probs=186.5
Q ss_pred ccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCc--cEEEECCccCCCCCHHHHh
Q 048639 255 GNIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSN--GDILIDSLNIKDLDLKSLR 332 (1139)
Q Consensus 255 ~~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~--G~i~~~g~~~~~~~~~~~~ 332 (1139)
+.|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++ |+|.++|.++.+.++ .+
T Consensus 4 ~~l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~--~~ 78 (362)
T TIGR03258 4 GGIRIDHLRVAYGA---NTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPP--HK 78 (362)
T ss_pred eEEEEEEEEEEECC---eEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCH--HH
Confidence 46999999999963 359999999999999999999999999999999999999999 999999999976655 35
Q ss_pred cceEEEecCCCCCcc-cHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHH
Q 048639 333 KNIGAVSQEPSLFTG-SLMDNIKVGNM--DADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARA 409 (1139)
Q Consensus 333 ~~i~~v~Q~~~l~~~-ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARa 409 (1139)
+.|+||+|++.+|+. |++|||.|+.. ....++..+ .+.+.++.+ |++......+.+||||||||++||||
T Consensus 79 r~ig~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~-----~v~~~l~~~--gL~~~~~~~~~~LSgGq~QRvaLARA 151 (362)
T TIGR03258 79 RGLALLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAE-----RVADALKLV--GLGDAAAHLPAQLSGGMQQRIAIARA 151 (362)
T ss_pred CCEEEEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHhc--CCCchhhCChhhCCHHHHHHHHHHHH
Confidence 689999999999975 99999998642 122222221 123345544 55556677888999999999999999
Q ss_pred HccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC---CCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhcc
Q 048639 410 IVKNPPILLLDEATSALDSESEKLVQEALERAMQ---GRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQT 483 (1139)
Q Consensus 410 l~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~---~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 483 (1139)
|+.+|++||||||||+||+.++..+.+.|+++.+ |.|+|+|||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 152 L~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~~~~~~~ 229 (362)
T TIGR03258 152 IAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEPQALYDA 229 (362)
T ss_pred HhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 9999999999999999999999999999988653 6899999999999865 999999999999999999999764
No 225
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=5.9e-42 Score=369.73 Aligned_cols=211 Identities=26% Similarity=0.425 Sum_probs=181.6
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhce
Q 048639 886 IEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQIG 965 (1139)
Q Consensus 886 I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~ 965 (1139)
|+++||+++|++. ..++|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.+||.++... ...+|++++
T Consensus 1 l~~~~l~~~~~~~-~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~-~~~~~~~i~ 78 (220)
T cd03263 1 LQIRNLTKTYKKG-TKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTD-RKAARQSLG 78 (220)
T ss_pred CEEEeeEEEeCCC-CceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccc-hHHHhhhEE
Confidence 5789999999642 14699999999999999999999999999999999999999999999999998764 356788999
Q ss_pred EEccccccc-cccHHHHhccCCC--cC----CHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 048639 966 LVQQEPLLF-SCSIRNNICYGNE--AA----SEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIART 1038 (1139)
Q Consensus 966 ~V~Qdp~LF-~gTIreNL~~~~~--~~----sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalARA 1038 (1139)
|+||++.+| ..|+++|+.++.. .. .++++.++++..++.+... +. ..+||||||||++||||
T Consensus 79 ~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~----~~~LS~G~~qrv~la~a 147 (220)
T cd03263 79 YCPQFDALFDELTVREHLRFYARLKGLPKSEIKEEVELLLRVLGLTDKAN-------KR----ARTLSGGMKRKLSLAIA 147 (220)
T ss_pred EecCcCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHHh-------Ch----hhhCCHHHHHHHHHHHH
Confidence 999999998 5799999976321 11 1245677788887765443 22 24799999999999999
Q ss_pred hcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEEEecChh
Q 048639 1039 LLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVVEMGSHS 1117 (1139)
Q Consensus 1039 Llr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~ 1117 (1139)
|+++|++|||||||++||+.+.+.+.+.|++.. .+ +|+|++||+++.+.. ||+|++|++|++++.|+++
T Consensus 148 l~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~---------~~-~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~ 217 (220)
T cd03263 148 LIGGPSVLLLDEPTSGLDPASRRAIWDLILEVR---------KG-RSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQ 217 (220)
T ss_pred HhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHh---------cC-CEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHH
Confidence 999999999999999999999999999999764 33 569999999999876 9999999999999999998
Q ss_pred HH
Q 048639 1118 TL 1119 (1139)
Q Consensus 1118 eL 1119 (1139)
++
T Consensus 218 ~~ 219 (220)
T cd03263 218 EL 219 (220)
T ss_pred Hc
Confidence 75
No 226
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.2e-42 Score=393.79 Aligned_cols=219 Identities=30% Similarity=0.483 Sum_probs=189.5
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhc
Q 048639 885 RIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQI 964 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i 964 (1139)
.|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||.++...+. .++++
T Consensus 3 ~l~i~~l~~~~~~---~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~--~~~~i 77 (369)
T PRK11000 3 SVTLRNVTKAYGD---VVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPP--AERGV 77 (369)
T ss_pred EEEEEEEEEEeCC---eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCH--hHCCE
Confidence 3899999999963 359999999999999999999999999999999999999999999999999987665 35789
Q ss_pred eEEcccccccc-ccHHHHhccCCC--cCC----HHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHH
Q 048639 965 GLVQQEPLLFS-CSIRNNICYGNE--AAS----EAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIAR 1037 (1139)
Q Consensus 965 ~~V~Qdp~LF~-gTIreNL~~~~~--~~s----d~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalAR 1037 (1139)
+||||++.+|. .|+++|+.++.. ..+ ++++.++++..++.++.++.| .+||||||||++|||
T Consensus 78 ~~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~~~~-----------~~LSgGq~QRvaLAr 146 (369)
T PRK11000 78 GMVFQSYALYPHLSVAENMSFGLKLAGAKKEEINQRVNQVAEVLQLAHLLDRKP-----------KALSGGQRQRVAIGR 146 (369)
T ss_pred EEEeCCcccCCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhhhcCCh-----------hhCCHHHHHHHHHHH
Confidence 99999999996 499999987532 112 346788888888876655443 479999999999999
Q ss_pred HhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEEEecCh
Q 048639 1038 TLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVVEMGSH 1116 (1139)
Q Consensus 1038 ALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~ 1116 (1139)
||+++|++||||||||+||+.+.+.+.+.|++... ..++|+|+|||+++.+.. ||+|++|++|++++.|+|
T Consensus 147 aL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~--------~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~ 218 (369)
T PRK11000 147 TLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHK--------RLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKP 218 (369)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH--------HhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCH
Confidence 99999999999999999999999999999987641 224569999999998876 999999999999999999
Q ss_pred hHHhhccCChH
Q 048639 1117 STLVAESQGVY 1127 (1139)
Q Consensus 1117 ~eLl~~~~g~f 1127 (1139)
+++.+++...|
T Consensus 219 ~~i~~~p~~~~ 229 (369)
T PRK11000 219 LELYHYPANRF 229 (369)
T ss_pred HHHHhCcccHH
Confidence 99987765544
No 227
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=6.2e-42 Score=370.24 Aligned_cols=214 Identities=29% Similarity=0.454 Sum_probs=179.1
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHH-hhhc
Q 048639 886 IEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRL-RSQI 964 (1139)
Q Consensus 886 I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~l-R~~i 964 (1139)
|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+...+ |+++
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (222)
T cd03224 1 LEVENLNAGYGK---SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAGI 77 (222)
T ss_pred CEEeeEEeecCC---eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcCe
Confidence 578999999963 369999999999999999999999999999999999999999999999999988776654 6779
Q ss_pred eEEccccccccc-cHHHHhccCCCcCC----HHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHh
Q 048639 965 GLVQQEPLLFSC-SIRNNICYGNEAAS----EAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIARTL 1039 (1139)
Q Consensus 965 ~~V~Qdp~LF~g-TIreNL~~~~~~~s----d~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalARAL 1039 (1139)
+|+||++.+|.+ |+++|+.++..... .+++.++++..+ . ++.........||||||||++|||||
T Consensus 78 ~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~l~~~~------~----l~~~~~~~~~~LS~G~~qrv~laral 147 (222)
T cd03224 78 GYVPEGRRIFPELTVEENLLLGAYARRRAKRKARLERVYELFP------R----LKERRKQLAGTLSGGEQQMLAIARAL 147 (222)
T ss_pred EEeccccccCCCCcHHHHHHHHhhhcCchhHHHHHHHHHHHHH------h----hhhhhhCchhhCCHHHHHHHHHHHHH
Confidence 999999999986 99999987532211 122333333331 1 22222344567999999999999999
Q ss_pred cCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEEEecChhH
Q 048639 1040 LKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVVEMGSHST 1118 (1139)
Q Consensus 1040 lr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~e 1118 (1139)
+++|++|||||||++||+++...+.+.|++.. ..++|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 148 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~---------~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 218 (222)
T cd03224 148 MSRPKLLLLDEPSEGLAPKIVEEIFEAIRELR---------DEGVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAE 218 (222)
T ss_pred hcCCCEEEECCCcccCCHHHHHHHHHHHHHHH---------HCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHH
Confidence 99999999999999999999999999999764 234569999999999876 99999999999999999988
Q ss_pred Hhh
Q 048639 1119 LVA 1121 (1139)
Q Consensus 1119 Ll~ 1121 (1139)
+.+
T Consensus 219 ~~~ 221 (222)
T cd03224 219 LLA 221 (222)
T ss_pred Hhc
Confidence 763
No 228
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-41 Score=378.50 Aligned_cols=216 Identities=30% Similarity=0.523 Sum_probs=182.6
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcce
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNI 335 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 335 (1139)
.|+++|++++|++ ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+..++++.|
T Consensus 4 ~l~~~~l~~~~~~--~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i 81 (274)
T PRK13647 4 IIEVEDLHFRYKD--GTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSKV 81 (274)
T ss_pred eEEEEEEEEEeCC--CCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhhE
Confidence 4899999999963 24599999999999999999999999999999999999999999999999999887778888899
Q ss_pred EEEecCC--CCCcccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHc
Q 048639 336 GAVSQEP--SLFTGSLMDNIKVGNM--DADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIV 411 (1139)
Q Consensus 336 ~~v~Q~~--~l~~~ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~ 411 (1139)
+|++|+| .++..|++||+.++.. ....++..+ .+.+.++.+ |+.........+||||||||++|||||+
T Consensus 82 ~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~L~~~~~~~~~~LSgG~~qrv~laraL~ 154 (274)
T PRK13647 82 GLVFQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVER-----RVEEALKAV--RMWDFRDKPPYHLSYGQKKRVAIAGVLA 154 (274)
T ss_pred EEEecChhhhhccCcHHHHHHhhHHHcCCCHHHHHH-----HHHHHHHHC--CCHHHhcCChhhCCHHHHHHHHHHHHHH
Confidence 9999998 5778899999998632 112211111 112233333 3333445566799999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhh
Q 048639 412 KNPPILLLDEATSALDSESEKLVQEALERAM-QGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSL 480 (1139)
Q Consensus 412 ~~~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l 480 (1139)
.+|++|||||||++||+.+...+.+.|+++. +++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 155 ~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 225 (274)
T PRK13647 155 MDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDKSLL 225 (274)
T ss_pred cCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHh
Confidence 9999999999999999999999999998874 48999999999999865 999999999999999998754
No 229
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=4e-42 Score=369.80 Aligned_cols=207 Identities=31% Similarity=0.480 Sum_probs=171.8
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHH---HHhc
Q 048639 257 IDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLK---SLRK 333 (1139)
Q Consensus 257 i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~---~~~~ 333 (1139)
++++|++++|++. .+++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+.. .+++
T Consensus 2 l~~~~l~~~~~~~-~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (216)
T TIGR00960 2 IRFEQVSKAYPGG-HQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLRR 80 (216)
T ss_pred eEEEEEEEEecCC-CeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHHH
Confidence 7899999999642 24699999999999999999999999999999999999999999999999988765433 3678
Q ss_pred ceEEEecCCCCCc-ccHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHH
Q 048639 334 NIGAVSQEPSLFT-GSLMDNIKVGNMD--ADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAI 410 (1139)
Q Consensus 334 ~i~~v~Q~~~l~~-~ti~~ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal 410 (1139)
+++|++|++.+|. .|++||+.++... ...++. ...+.+.++.+ |+.........+||||||||++|||||
T Consensus 81 ~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~laral 153 (216)
T TIGR00960 81 HIGMVFQDHRLLSDRTVYDNVAFPLRIIGVPPRDA-----NERVSAALEKV--GLEGKAHALPMQLSGGEQQRVAIARAI 153 (216)
T ss_pred hceEEecCccccccccHHHHHHHHHHhcCCCHHHH-----HHHHHHHHHHc--CChhhhhCChhhCCHHHHHHHHHHHHH
Confidence 9999999999886 5999999875211 111111 11122344444 344445566779999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCCeEEEEecCccchhc-cCEEEEEeCcEE
Q 048639 411 VKNPPILLLDEATSALDSESEKLVQEALERAM-QGRTVILIAHRMSTIVN-ADMIAVVEDGQV 471 (1139)
Q Consensus 411 ~~~~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i 471 (1139)
+.+|++|||||||++||+.+++.+.+.|+++. +++|+|+|||+++.+.. ||++++|++|++
T Consensus 154 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 154 VHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred hcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999998874 47899999999999875 999999999975
No 230
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.8e-42 Score=374.37 Aligned_cols=221 Identities=34% Similarity=0.550 Sum_probs=183.3
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCC---HHHHhc
Q 048639 257 IDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLD---LKSLRK 333 (1139)
Q Consensus 257 i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~---~~~~~~ 333 (1139)
++++|++++|++ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+ ...+++
T Consensus 1 l~~~~l~~~~~~--~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 78 (241)
T cd03256 1 IEVENLSKTYPN--GKKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLRR 78 (241)
T ss_pred CEEeeEEEecCC--ccEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHHh
Confidence 468999999964 146999999999999999999999999999999999999999999999999987765 456778
Q ss_pred ceEEEecCCCCCc-ccHHHHHhcCCCCCC--HHHH---HHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHH
Q 048639 334 NIGAVSQEPSLFT-GSLMDNIKVGNMDAD--DEQI---YNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIA 407 (1139)
Q Consensus 334 ~i~~v~Q~~~l~~-~ti~~ni~~g~~~~~--~~~~---~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lA 407 (1139)
.++|+||++.+|. .|++||+.++..... ...+ ........+.+.++.+ |+.......+.+||||||||++||
T Consensus 79 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la 156 (241)
T cd03256 79 QIGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERV--GLLDKAYQRADQLSGGQQQRVAIA 156 (241)
T ss_pred ccEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHc--CChhhhCCCcccCCHHHHHHHHHH
Confidence 9999999999887 599999987532110 0000 0001111223445554 445556778889999999999999
Q ss_pred HHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhh
Q 048639 408 RAIVKNPPILLLDEATSALDSESEKLVQEALERAM--QGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLL 481 (1139)
Q Consensus 408 Ral~~~~~illlDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~ 481 (1139)
|||+.+|++|||||||++||+.+...+.+.|+++. .++|+|++||+++.+.. ||++++|++|++++.|+++++.
T Consensus 157 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 233 (241)
T cd03256 157 RALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVDLAREYADRIVGLKDGRIVFDGPPAELT 233 (241)
T ss_pred HHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCHHHhh
Confidence 99999999999999999999999999999998874 38999999999999985 9999999999999999998863
No 231
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=7.2e-42 Score=369.74 Aligned_cols=216 Identities=29% Similarity=0.483 Sum_probs=180.4
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHH-hcce
Q 048639 257 IDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSL-RKNI 335 (1139)
Q Consensus 257 i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~-~~~i 335 (1139)
|+++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.... ++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (222)
T cd03224 1 LEVENLNAGYGK---SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAGI 77 (222)
T ss_pred CEEeeEEeecCC---eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcCe
Confidence 478999999963 369999999999999999999999999999999999999999999999999887766544 5789
Q ss_pred EEEecCCCCCcc-cHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHccCC
Q 048639 336 GAVSQEPSLFTG-SLMDNIKVGNMDADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVKNP 414 (1139)
Q Consensus 336 ~~v~Q~~~l~~~-ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~~~ 414 (1139)
+|++|++.+|.. |++||+.++.......+..+ .+.+.++.++ +++......+.+||||||||++|||||+.+|
T Consensus 78 ~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~-----~~~~~l~~~~-~l~~~~~~~~~~LS~G~~qrv~laral~~~p 151 (222)
T cd03224 78 GYVPEGRRIFPELTVEENLLLGAYARRRAKRKA-----RLERVYELFP-RLKERRKQLAGTLSGGEQQMLAIARALMSRP 151 (222)
T ss_pred EEeccccccCCCCcHHHHHHHHhhhcCchhHHH-----HHHHHHHHHH-hhhhhhhCchhhCCHHHHHHHHHHHHHhcCC
Confidence 999999999886 99999988643221111111 1112233321 1233456677899999999999999999999
Q ss_pred CEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhh
Q 048639 415 PILLLDEATSALDSESEKLVQEALERAM-QGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLL 481 (1139)
Q Consensus 415 ~illlDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~ 481 (1139)
+++||||||++||+.++..+.+.|+++. +++|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 152 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 220 (222)
T cd03224 152 KLLLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAELL 220 (222)
T ss_pred CEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHHHh
Confidence 9999999999999999999999998875 57899999999998866 9999999999999999888764
No 232
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.2e-42 Score=380.71 Aligned_cols=217 Identities=30% Similarity=0.492 Sum_probs=186.6
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccC--CCChHHHhh
Q 048639 885 RIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIK--EYNLRRLRS 962 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~--~~~l~~lR~ 962 (1139)
-|+++||+++|+. +.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. ..+...+|+
T Consensus 5 ~l~~~~l~~~~~~--~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~ 82 (283)
T PRK13636 5 ILKVEELNYNYSD--GTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKLRE 82 (283)
T ss_pred eEEEEeEEEEeCC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHHHh
Confidence 4899999999962 246999999999999999999999999999999999999999999999999984 344567889
Q ss_pred hceEEcccc--ccccccHHHHhccCCC--cCC----HHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHH
Q 048639 963 QIGLVQQEP--LLFSCSIRNNICYGNE--AAS----EAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIA 1034 (1139)
Q Consensus 963 ~i~~V~Qdp--~LF~gTIreNL~~~~~--~~s----d~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrla 1034 (1139)
+++|+||+| .+|+.|+++|+.++.. ..+ ++++.++++..++.++.+ ....+||||||||++
T Consensus 83 ~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~-----------~~~~~LS~G~~qrl~ 151 (283)
T PRK13636 83 SVGMVFQDPDNQLFSASVYQDVSFGAVNLKLPEDEVRKRVDNALKRTGIEHLKD-----------KPTHCLSFGQKKRVA 151 (283)
T ss_pred hEEEEecCcchhhccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhhhh-----------CCcccCCHHHHHHHH
Confidence 999999998 5788999999986421 122 245677788888866533 234679999999999
Q ss_pred HHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEEEe
Q 048639 1035 IARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVVEM 1113 (1139)
Q Consensus 1035 lARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ive~ 1113 (1139)
|||||+.+|+||||||||++||+++...+.+.|++... ..++|||++||+++.+.. ||||++|++|++++.
T Consensus 152 laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~--------~~g~tillvsH~~~~~~~~~dri~~l~~G~i~~~ 223 (283)
T PRK13636 152 IAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQK--------ELGLTIIIATHDIDIVPLYCDNVFVMKEGRVILQ 223 (283)
T ss_pred HHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHH--------hCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEe
Confidence 99999999999999999999999999999999987641 224569999999999974 999999999999999
Q ss_pred cChhHHhhc
Q 048639 1114 GSHSTLVAE 1122 (1139)
Q Consensus 1114 G~~~eLl~~ 1122 (1139)
|+++++++.
T Consensus 224 g~~~~~~~~ 232 (283)
T PRK13636 224 GNPKEVFAE 232 (283)
T ss_pred CCHHHHhcC
Confidence 999998863
No 233
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-41 Score=378.38 Aligned_cols=218 Identities=33% Similarity=0.607 Sum_probs=188.9
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhc
Q 048639 885 RIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQI 964 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i 964 (1139)
.|+++|++++|++. +.++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+...+|+++
T Consensus 7 ~l~~~nl~~~~~~~-~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~i 85 (271)
T PRK13632 7 MIKVENVSFSYPNS-ENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRKKI 85 (271)
T ss_pred EEEEEeEEEEcCCC-CccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhcce
Confidence 48999999999632 34699999999999999999999999999999999999999999999999999888878889999
Q ss_pred eEEcccc--ccccccHHHHhccCCC--cCCH----HHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHH
Q 048639 965 GLVQQEP--LLFSCSIRNNICYGNE--AASE----AEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIA 1036 (1139)
Q Consensus 965 ~~V~Qdp--~LF~gTIreNL~~~~~--~~sd----~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalA 1036 (1139)
+|+||+| .++..|+++|+.++.. ..+. +.+.++++..++.++..+.| .+||||||||++||
T Consensus 86 ~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrl~la 154 (271)
T PRK13632 86 GIIFQNPDNQFIGATVEDDIAFGLENKKVPPKKMKDIIDDLAKKVGMEDYLDKEP-----------QNLSGGQKQRVAIA 154 (271)
T ss_pred EEEEeCHHHhcCcccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCCc-----------ccCCHHHHHHHHHH
Confidence 9999998 4567899999986421 1222 23667788888877655433 57999999999999
Q ss_pred HHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhcCCEEEEEeCCEEEEecCh
Q 048639 1037 RTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVINSDVIVVMDKGEVVEMGSH 1116 (1139)
Q Consensus 1037 RALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~~DrI~vl~~G~ive~G~~ 1116 (1139)
|||+++|++|||||||++||+.+.+.+.+.|++... .+++|+|++||+++.+..||+|++|++|++++.|++
T Consensus 155 ral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~--------~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~g~~ 226 (271)
T PRK13632 155 SVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRK--------TRKKTLISITHDMDEAILADKVIVFSEGKLIAQGKP 226 (271)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH--------hcCcEEEEEEechhHHhhCCEEEEEECCEEEEecCH
Confidence 999999999999999999999999999999997641 223569999999999888999999999999999999
Q ss_pred hHHhhc
Q 048639 1117 STLVAE 1122 (1139)
Q Consensus 1117 ~eLl~~ 1122 (1139)
+++.++
T Consensus 227 ~~~~~~ 232 (271)
T PRK13632 227 KEILNN 232 (271)
T ss_pred HHHhcC
Confidence 998754
No 234
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-41 Score=380.36 Aligned_cols=220 Identities=26% Similarity=0.477 Sum_probs=184.1
Q ss_pred EEEEeEEEECCCCC--CCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCC---------
Q 048639 257 IDIRDVCFAYPSRP--DQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKD--------- 325 (1139)
Q Consensus 257 i~~~~v~~~y~~~~--~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~--------- 325 (1139)
|+++|++++|++.. ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++..
T Consensus 3 i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (305)
T PRK13651 3 IKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKEK 82 (305)
T ss_pred EEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceecccccccccccc
Confidence 78999999997432 1359999999999999999999999999999999999999999999999876532
Q ss_pred ---------------CCHHHHhcceEEEecCC--CCCcccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhCCCCCC
Q 048639 326 ---------------LDLKSLRKNIGAVSQEP--SLFTGSLMDNIKVGNM--DADDEQIYNASMMANAHSFISQLPDQYS 386 (1139)
Q Consensus 326 ---------------~~~~~~~~~i~~v~Q~~--~l~~~ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~ 386 (1139)
.+...+++.||||||+| .+|..|++|||.|+.. ....+++.+. +.+.++.+ |++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~-----~~~~l~~~--gL~ 155 (305)
T PRK13651 83 VLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSKEEAKKR-----AAKYIELV--GLD 155 (305)
T ss_pred cccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCHHHHHHH-----HHHHHHHc--CCC
Confidence 13456788999999986 6788899999998742 2233333221 22344444 443
Q ss_pred -ccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCCeEEEEecCccchhc-cCEE
Q 048639 387 -TELGQRGVQLSGGQKQRIAIARAIVKNPPILLLDEATSALDSESEKLVQEALERAM-QGRTVILIAHRMSTIVN-ADMI 463 (1139)
Q Consensus 387 -t~i~~~g~~LSgGqkqRi~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i 463 (1139)
......+.+||||||||++|||||+.+|++|||||||++||+.+...+.+.|+++. .|+|+|+|||+++.+.. ||||
T Consensus 156 ~~~~~~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~~~~~~adrv 235 (305)
T PRK13651 156 ESYLQRSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHDLDNVLEWTKRT 235 (305)
T ss_pred hhhhhCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeCHHHHHHhCCEE
Confidence 34667888999999999999999999999999999999999999999999998875 48999999999998765 9999
Q ss_pred EEEeCcEEEEecChhhhhcc
Q 048639 464 AVVEDGQVTETGTHHSLLQT 483 (1139)
Q Consensus 464 ~~l~~G~i~~~g~~~~l~~~ 483 (1139)
++|++|++++.|+++++.+.
T Consensus 236 ~vl~~G~i~~~g~~~~~~~~ 255 (305)
T PRK13651 236 IFFKDGKIIKDGDTYDILSD 255 (305)
T ss_pred EEEECCEEEEECCHHHHhcC
Confidence 99999999999999998664
No 235
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=2.2e-41 Score=361.32 Aligned_cols=203 Identities=34% Similarity=0.640 Sum_probs=179.2
Q ss_pred ccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcc
Q 048639 255 GNIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKN 334 (1139)
Q Consensus 255 ~~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~ 334 (1139)
+.++++|++++|+.. ..++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...++++
T Consensus 5 ~~l~~~~l~~~~~~~-~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~ 83 (207)
T cd03369 5 GEIEVENLSVRYAPD-LPPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPLEDLRSS 83 (207)
T ss_pred CeEEEEEEEEEeCCC-CcccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCHHHHHhh
Confidence 469999999999742 2469999999999999999999999999999999999999999999999999887777788889
Q ss_pred eEEEecCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHccCC
Q 048639 335 IGAVSQEPSLFTGSLMDNIKVGNMDADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVKNP 414 (1139)
Q Consensus 335 i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~~~ 414 (1139)
|+||+|+|.+|++|++||+.+... ...+++.+++ + +++++..||||||||++||||++.+|
T Consensus 84 i~~v~q~~~~~~~tv~~~l~~~~~-~~~~~~~~~l---------~---------~~~~~~~LS~G~~qrv~laral~~~p 144 (207)
T cd03369 84 LTIIPQDPTLFSGTIRSNLDPFDE-YSDEEIYGAL---------R---------VSEGGLNLSQGQRQLLCLARALLKRP 144 (207)
T ss_pred EEEEecCCcccCccHHHHhcccCC-CCHHHHHHHh---------h---------ccCCCCcCCHHHHHHHHHHHHHhhCC
Confidence 999999999999999999986542 2333322221 1 34567899999999999999999999
Q ss_pred CEEEEeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhccCEEEEEeCcEEEEecCh
Q 048639 415 PILLLDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVNADMIAVVEDGQVTETGTH 477 (1139)
Q Consensus 415 ~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~ 477 (1139)
+++||||||++||+.+...+.+.|+++.+++|+|++||+++.+..||++++|++|++++.|++
T Consensus 145 ~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~th~~~~~~~~d~v~~l~~g~i~~~g~~ 207 (207)
T cd03369 145 RVLVLDEATASIDYATDALIQKTIREEFTNSTILTIAHRLRTIIDYDKILVMDAGEVKEYDHP 207 (207)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEecCCC
Confidence 999999999999999999999999988778999999999999877999999999999988753
No 236
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.1e-42 Score=373.46 Aligned_cols=215 Identities=33% Similarity=0.541 Sum_probs=181.6
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcce
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNI 335 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 335 (1139)
.++++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. .++++
T Consensus 2 ~l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i 76 (239)
T cd03296 2 SIEVRNVSKRFGD---FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPV--QERNV 76 (239)
T ss_pred EEEEEeEEEEECC---EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCc--cccce
Confidence 3789999999963 469999999999999999999999999999999999999999999999998865543 25689
Q ss_pred EEEecCCCCCc-ccHHHHHhcCCCCC------CHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHH
Q 048639 336 GAVSQEPSLFT-GSLMDNIKVGNMDA------DDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIAR 408 (1139)
Q Consensus 336 ~~v~Q~~~l~~-~ti~~ni~~g~~~~------~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lAR 408 (1139)
+|++|+|.++. .|++||+.++.... ...+. ...+.+.++.+ |++......+.+||||||||++|||
T Consensus 77 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~ 149 (239)
T cd03296 77 GFVFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEI-----RAKVHELLKLV--QLDWLADRYPAQLSGGQRQRVALAR 149 (239)
T ss_pred EEEecCCcccCCCCHHHHHhhhhhhccccccCCHHHH-----HHHHHHHHHHc--CChhhhhcChhhCCHHHHHHHHHHH
Confidence 99999999986 59999998863211 11111 11223445555 4555566777899999999999999
Q ss_pred HHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhc
Q 048639 409 AIVKNPPILLLDEATSALDSESEKLVQEALERAMQ--GRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQ 482 (1139)
Q Consensus 409 al~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 482 (1139)
||+.+|++|||||||++||+++.+.+.+.|.++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 150 al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 226 (239)
T cd03296 150 ALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTPDEVYD 226 (239)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHHhc
Confidence 99999999999999999999999999999988743 7899999999998765 99999999999999999988754
No 237
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-41 Score=377.94 Aligned_cols=224 Identities=30% Similarity=0.516 Sum_probs=187.7
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcce
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNI 335 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 335 (1139)
.++++|++++|++. .+++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+...+++.|
T Consensus 5 ~l~~~~l~~~~~~~-~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13635 5 IIRVEHISFRYPDA-ATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRRQV 83 (279)
T ss_pred eEEEEEEEEEeCCC-CccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhhhe
Confidence 48999999999642 34699999999999999999999999999999999999999999999999999887777778899
Q ss_pred EEEecCC--CCCcccHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHc
Q 048639 336 GAVSQEP--SLFTGSLMDNIKVGNMD--ADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIV 411 (1139)
Q Consensus 336 ~~v~Q~~--~l~~~ti~~ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~ 411 (1139)
+|++|+| .+++.|++|||.++... .+.++..+ .+.+.++.+ |+...+......||||||||++|||||+
T Consensus 84 ~~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~l~~~--gL~~~~~~~~~~LS~G~~qrv~laral~ 156 (279)
T PRK13635 84 GMVFQNPDNQFVGATVQDDVAFGLENIGVPREEMVE-----RVDQALRQV--GMEDFLNREPHRLSGGQKQRVAIAGVLA 156 (279)
T ss_pred EEEEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHH-----HHHHHHHHc--CChhhhhCCcccCCHHHHHHHHHHHHHH
Confidence 9999998 45677999999886321 12222211 112233333 3444455667799999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CCeEEEEecCccchhccCEEEEEeCcEEEEecChhhhhccchHH
Q 048639 412 KNPPILLLDEATSALDSESEKLVQEALERAMQ--GRTVILIAHRMSTIVNADMIAVVEDGQVTETGTHHSLLQTSDFY 487 (1139)
Q Consensus 412 ~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~ 487 (1139)
.+|++|||||||++||+.+...+.+.|+++.+ ++|+|++||+++.+..||+|++|++|++++.|+++++.+....+
T Consensus 157 ~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~~~ 234 (279)
T PRK13635 157 LQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDEAAQADRVIVMNKGEILEEGTPEEIFKSGHML 234 (279)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHcCCEEEEEECCEEEEECCHHHHhcCHHHH
Confidence 99999999999999999999999999988753 78999999999998889999999999999999999887654333
No 238
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=1.1e-41 Score=391.54 Aligned_cols=230 Identities=25% Similarity=0.468 Sum_probs=191.0
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcce
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNI 335 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 335 (1139)
.|+++|++++|++ +++|+|+||++++||+++|+||||||||||+|+|+|+++|++|+|.++|+++...+...++++|
T Consensus 3 ~L~~~nls~~y~~---~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~i 79 (402)
T PRK09536 3 MIDVSDLSVEFGD---TTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRRV 79 (402)
T ss_pred eEEEeeEEEEECC---EEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcce
Confidence 4899999999963 4699999999999999999999999999999999999999999999999999988888889999
Q ss_pred EEEecCCCC-CcccHHHHHhcCCCCCC--HHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHcc
Q 048639 336 GAVSQEPSL-FTGSLMDNIKVGNMDAD--DEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVK 412 (1139)
Q Consensus 336 ~~v~Q~~~l-~~~ti~~ni~~g~~~~~--~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~ 412 (1139)
|||+|++.+ ++.|++||+.++..... ... ........+.+.++.+ |+.........+||||||||++|||||++
T Consensus 80 g~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~-~~~~~~~~v~~~le~v--gl~~~~~~~~~~LSgGerQRv~IArAL~~ 156 (402)
T PRK09536 80 ASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDT-WTETDRAAVERAMERT--GVAQFADRPVTSLSGGERQRVLLARALAQ 156 (402)
T ss_pred EEEccCCCCCCCCCHHHHHHhccchhcccccC-CCHHHHHHHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHHHHc
Confidence 999999987 56799999998752110 000 0000111122334433 34444556678999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhccchHHHHH
Q 048639 413 NPPILLLDEATSALDSESEKLVQEALERAM-QGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQTSDFYNRL 490 (1139)
Q Consensus 413 ~~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~ 490 (1139)
+|++|||||||++||+.++..+.+.|+++. +++|+|++||+++.+.. |||+++|++|++++.|++++++.. +.+.+.
T Consensus 157 ~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~~G~~~ev~~~-~~l~~~ 235 (402)
T PRK09536 157 ATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVRAAGPPADVLTA-DTLRAA 235 (402)
T ss_pred CCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHhCc-HHHHHH
Confidence 999999999999999999999999999875 48899999999999965 999999999999999999998764 345555
Q ss_pred Hh
Q 048639 491 FT 492 (1139)
Q Consensus 491 ~~ 492 (1139)
|.
T Consensus 236 ~~ 237 (402)
T PRK09536 236 FD 237 (402)
T ss_pred hC
Confidence 53
No 239
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-41 Score=376.21 Aligned_cols=224 Identities=29% Similarity=0.470 Sum_probs=190.7
Q ss_pred ccccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccC-----CccEEEECCcccCC--
Q 048639 882 IKGRIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDP-----NEGIILIDGKGIKE-- 954 (1139)
Q Consensus 882 ~~g~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~~-- 954 (1139)
..+.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++..
T Consensus 16 ~~~~l~~~nl~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~ 92 (267)
T PRK14235 16 TEIKMRARDVSVFYGE---KQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPR 92 (267)
T ss_pred CCceEEEEeEEEEECC---EEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECcccc
Confidence 3457999999999963 4699999999999999999999999999999999999975 89999999999875
Q ss_pred CChHHHhhhceEEccccccccccHHHHhccCCC-------c-CCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCC
Q 048639 955 YNLRRLRSQIGLVQQEPLLFSCSIRNNICYGNE-------A-ASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLS 1026 (1139)
Q Consensus 955 ~~l~~lR~~i~~V~Qdp~LF~gTIreNL~~~~~-------~-~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LS 1026 (1139)
.+...+|++++|+||+|.+|..|+++|+.++.. . ..++++.++++.+++.+++.. .....+..||
T Consensus 93 ~~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS 165 (267)
T PRK14235 93 LDVVELRARVGMVFQKPNPFPKSIYENVAYGPRIHGLARSKAELDEIVETSLRKAGLWEEVKD-------RLHEPGTGLS 165 (267)
T ss_pred cchHHHhhceEEEecCCCCCCCcHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCchhhhH-------HhhCCcccCC
Confidence 345678899999999999999999999986421 1 113457788888888654421 2234456799
Q ss_pred hHHHHHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEE
Q 048639 1027 GGQKQRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVM 1105 (1139)
Q Consensus 1027 gGQrQrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl 1105 (1139)
||||||++|||||+.+|++|||||||++||+.+.+.+.+.|++.. . ++|+|++||+++.+.. ||+|++|
T Consensus 166 gGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~---------~-~~tiiivtH~~~~~~~~~d~v~~l 235 (267)
T PRK14235 166 GGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELR---------Q-NYTIVIVTHSMQQAARVSQRTAFF 235 (267)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHh---------c-CCeEEEEEcCHHHHHhhCCEEEEE
Confidence 999999999999999999999999999999999999999999764 3 3469999999999966 9999999
Q ss_pred eCCEEEEecChhHHhhccCC
Q 048639 1106 DKGEVVEMGSHSTLVAESQG 1125 (1139)
Q Consensus 1106 ~~G~ive~G~~~eLl~~~~g 1125 (1139)
++|++++.|+++++..++..
T Consensus 236 ~~G~i~~~g~~~~~~~~~~~ 255 (267)
T PRK14235 236 HLGNLVEVGDTEKMFTNPDD 255 (267)
T ss_pred ECCEEEEeCCHHHHHhCCCC
Confidence 99999999999999865443
No 240
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=1.6e-41 Score=372.54 Aligned_cols=216 Identities=33% Similarity=0.549 Sum_probs=183.1
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCC-----ccEEEECCccCCCC--CHH
Q 048639 257 IDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPS-----NGDILIDSLNIKDL--DLK 329 (1139)
Q Consensus 257 i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~-----~G~i~~~g~~~~~~--~~~ 329 (1139)
++++|++++|++ .++++|+||+|++||+++|+|+||||||||+++|+|+++|+ +|+|.++|+++... +..
T Consensus 2 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~ 78 (247)
T TIGR00972 2 IEIENLNLFYGE---KEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVV 78 (247)
T ss_pred EEEEEEEEEECC---eeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchH
Confidence 789999999963 35999999999999999999999999999999999999998 99999999998653 345
Q ss_pred HHhcceEEEecCCCCCcccHHHHHhcCCCC---CCHHHHHHHHHHhcHHHHHHhCCCCCC----ccccccCCCCChHHHH
Q 048639 330 SLRKNIGAVSQEPSLFTGSLMDNIKVGNMD---ADDEQIYNASMMANAHSFISQLPDQYS----TELGQRGVQLSGGQKQ 402 (1139)
Q Consensus 330 ~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~---~~~~~~~~~~~~~~~~~~i~~l~~g~~----t~i~~~g~~LSgGqkq 402 (1139)
.+++.++|+||++.+|+.|++||+.++... ...++..+ .+.+.++.+ |+. ......+.+|||||||
T Consensus 79 ~~~~~i~~v~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~~~~~LSgG~~q 151 (247)
T TIGR00972 79 ELRRRVGMVFQKPNPFPMSIYDNIAYGPRLHGIKDKKELDE-----IVEESLKKA--ALWDEVKDRLHDSALGLSGGQQQ 151 (247)
T ss_pred HHHhheEEEecCcccCCCCHHHHHHhHHHhcCCCCHHHHHH-----HHHHHHHHc--CCCcchhhHhhCCcccCCHHHHH
Confidence 667899999999999999999999875311 11122111 122334444 333 4456778899999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhh
Q 048639 403 RIAIARAIVKNPPILLLDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLL 481 (1139)
Q Consensus 403 Ri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~ 481 (1139)
|++|||||+.+|+++||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++.
T Consensus 152 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 231 (247)
T TIGR00972 152 RLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKKKYTIVIVTHNMQQAARISDRTAFFYDGELVEYGPTEQIF 231 (247)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999987667899999999998865 9999999999999999998876
Q ss_pred c
Q 048639 482 Q 482 (1139)
Q Consensus 482 ~ 482 (1139)
.
T Consensus 232 ~ 232 (247)
T TIGR00972 232 T 232 (247)
T ss_pred h
Confidence 4
No 241
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.7e-42 Score=367.71 Aligned_cols=207 Identities=34% Similarity=0.576 Sum_probs=174.5
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcceE
Q 048639 257 IDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNIG 336 (1139)
Q Consensus 257 i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 336 (1139)
++++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. .++.++
T Consensus 1 l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~--~~~~i~ 75 (213)
T cd03259 1 LELKGLSKTYGS---VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVPP--ERRNIG 75 (213)
T ss_pred CeeeeeEEEeCC---eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCch--hhccEE
Confidence 468999999963 469999999999999999999999999999999999999999999999999876442 467899
Q ss_pred EEecCCCCCc-ccHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHccC
Q 048639 337 AVSQEPSLFT-GSLMDNIKVGNMD--ADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVKN 413 (1139)
Q Consensus 337 ~v~Q~~~l~~-~ti~~ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~~ 413 (1139)
|+||++.++. .|++||+.++... ...++.. ..+.+.++.+ |++........+||||||||++|||||+.+
T Consensus 76 ~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrl~la~al~~~ 148 (213)
T cd03259 76 MVFQDYALFPHLTVAENIAFGLKLRGVPKAEIR-----ARVRELLELV--GLEGLLNRYPHELSGGQQQRVALARALARE 148 (213)
T ss_pred EEcCchhhccCCcHHHHHHhHHHHcCCCHHHHH-----HHHHHHHHHc--CChhhhhcChhhCCHHHHHHHHHHHHHhcC
Confidence 9999998886 5999999875321 1111111 1223445555 455556677789999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCCeEEEEecCccchhc-cCEEEEEeCcEEEEec
Q 048639 414 PPILLLDEATSALDSESEKLVQEALERAM--QGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETG 475 (1139)
Q Consensus 414 ~~illlDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g 475 (1139)
|+++||||||++||+.++..+.+.|+++. .++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 149 p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 149 PSLLLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999999998864 38999999999998866 9999999999998765
No 242
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=9.8e-42 Score=367.44 Aligned_cols=208 Identities=26% Similarity=0.483 Sum_probs=178.7
Q ss_pred EEEEeEEEECCCCCC-cccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhc
Q 048639 886 IEFQNIKFNYPSRPE-VTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQI 964 (1139)
Q Consensus 886 I~~~nvsf~Y~~~~~-~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i 964 (1139)
|+++||+++|++... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ....+|+++
T Consensus 2 l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-~~~~~~~~i 80 (218)
T cd03266 2 ITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVK-EPAEARRRL 80 (218)
T ss_pred eEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEccc-CHHHHHhhE
Confidence 689999999974311 169999999999999999999999999999999999999999999999999875 456778999
Q ss_pred eEEccccccccc-cHHHHhccCCC--c----CCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHH
Q 048639 965 GLVQQEPLLFSC-SIRNNICYGNE--A----ASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIAR 1037 (1139)
Q Consensus 965 ~~V~Qdp~LF~g-TIreNL~~~~~--~----~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalAR 1037 (1139)
+|+||+|.+|.+ |++||+.+... . ..++++.++++..++.+.... ...+||||||||++|||
T Consensus 81 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~lar 149 (218)
T cd03266 81 GFVSDSTGLYDRLTARENLEYFAGLYGLKGDELTARLEELADRLGMEELLDR-----------RVGGFSTGMRQKVAIAR 149 (218)
T ss_pred EEecCCcccCcCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHHhh-----------hhhhcCHHHHHHHHHHH
Confidence 999999999985 99999975321 1 123467778888888665443 34579999999999999
Q ss_pred HhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEEEec
Q 048639 1038 TLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVVEMG 1114 (1139)
Q Consensus 1038 ALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ive~G 1114 (1139)
|++++|++|||||||++||+.+.+.+.+.|++.. .+++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 150 al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~---------~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 150 ALVHDPPVLLLDEPTTGLDVMATRALREFIRQLR---------ALGKCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred HHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHH---------HCCCEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 9999999999999999999999999999999764 334569999999998876 9999999999998865
No 243
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=1.3e-41 Score=374.61 Aligned_cols=220 Identities=33% Similarity=0.539 Sum_probs=187.4
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCC---------
Q 048639 886 IEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYN--------- 956 (1139)
Q Consensus 886 I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~--------- 956 (1139)
|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++
T Consensus 1 i~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 77 (252)
T TIGR03005 1 VRFSDVTKRFGI---LTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPIDEGQIQVEGEQLYHMPGRNGPLVPA 77 (252)
T ss_pred CEEEEEEEEeCC---eeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccccccccccccc
Confidence 579999999963 36999999999999999999999999999999999999999999999999987653
Q ss_pred ----hHHHhhhceEEcccccccc-ccHHHHhccCCC-------cCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCC
Q 048639 957 ----LRRLRSQIGLVQQEPLLFS-CSIRNNICYGNE-------AASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQ 1024 (1139)
Q Consensus 957 ----l~~lR~~i~~V~Qdp~LF~-gTIreNL~~~~~-------~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~ 1024 (1139)
...+|++++|++|++.+|. .|+++|+.++.. ...++++.++++..++.++..+. ...
T Consensus 78 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~-----------~~~ 146 (252)
T TIGR03005 78 DEKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLVLGMARAEAEKRAMELLDMVGLADKADHM-----------PAQ 146 (252)
T ss_pred chhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhHhhcC-----------hhh
Confidence 2467889999999998885 799999986411 11234577788888877665443 357
Q ss_pred CChHHHHHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEE
Q 048639 1025 LSGGQKQRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIV 1103 (1139)
Q Consensus 1025 LSgGQrQrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~ 1103 (1139)
||||||||++|||||+++|++|||||||++||+.+...+.+.|++... ..++|+|+|||+++.+.+ |||++
T Consensus 147 LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--------~~~~tiiivsH~~~~~~~~~d~i~ 218 (252)
T TIGR03005 147 LSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLAS--------EHDLTMLLVTHEMGFAREFADRVC 218 (252)
T ss_pred cCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH--------hcCcEEEEEeCCHHHHHHhcCEEE
Confidence 999999999999999999999999999999999999999999997641 224569999999999865 99999
Q ss_pred EEeCCEEEEecChhHHhhccCChH
Q 048639 1104 VMDKGEVVEMGSHSTLVAESQGVY 1127 (1139)
Q Consensus 1104 vl~~G~ive~G~~~eLl~~~~g~f 1127 (1139)
+|++|++++.|+++++.+.+.-.|
T Consensus 219 ~l~~G~i~~~g~~~~~~~~~~~~~ 242 (252)
T TIGR03005 219 FFDKGRIVEQGKPDEIFRQPKEER 242 (252)
T ss_pred EEECCEEEEeCCHHHHhcCCCcHH
Confidence 999999999999999986544333
No 244
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.4e-42 Score=367.80 Aligned_cols=211 Identities=25% Similarity=0.428 Sum_probs=181.8
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhce
Q 048639 886 IEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQIG 965 (1139)
Q Consensus 886 I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~ 965 (1139)
|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... ...+|++++
T Consensus 1 i~~~~~~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~ 76 (220)
T cd03265 1 IEVENLVKKYGD---FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVRE-PREVRRRIG 76 (220)
T ss_pred CEEEEEEEEECC---EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcC-hHHHhhcEE
Confidence 578999999963 3699999999999999999999999999999999999999999999999988753 356788999
Q ss_pred EEccccccccc-cHHHHhccCC-----C-cCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 048639 966 LVQQEPLLFSC-SIRNNICYGN-----E-AASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIART 1038 (1139)
Q Consensus 966 ~V~Qdp~LF~g-TIreNL~~~~-----~-~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalARA 1038 (1139)
|+||++.+|.. |+++|+.++. + ...++++.++++..++.++.++.| .+||||||||++||||
T Consensus 77 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qr~~la~a 145 (220)
T cd03265 77 IVFQDLSVDDELTGWENLYIHARLYGVPGAERRERIDELLDFVGLLEAADRLV-----------KTYSGGMRRRLEIARS 145 (220)
T ss_pred EecCCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCCh-----------hhCCHHHHHHHHHHHH
Confidence 99999998874 9999997531 1 112346788888888876654432 4799999999999999
Q ss_pred hcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEEEecChh
Q 048639 1039 LLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVVEMGSHS 1117 (1139)
Q Consensus 1039 Llr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~ 1117 (1139)
++.+|++|||||||++||+++.+.+.+.|++... +.++|+|+|||+++.+.. ||||++|++|++++.|+++
T Consensus 146 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--------~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~ 217 (220)
T cd03265 146 LVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKE--------EFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPE 217 (220)
T ss_pred HhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHH--------hcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChH
Confidence 9999999999999999999999999999987641 224569999999999876 9999999999999999988
Q ss_pred HH
Q 048639 1118 TL 1119 (1139)
Q Consensus 1118 eL 1119 (1139)
++
T Consensus 218 ~~ 219 (220)
T cd03265 218 EL 219 (220)
T ss_pred Hc
Confidence 75
No 245
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=9.4e-42 Score=383.53 Aligned_cols=215 Identities=28% Similarity=0.475 Sum_probs=185.7
Q ss_pred ccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhh
Q 048639 884 GRIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQ 963 (1139)
Q Consensus 884 g~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~ 963 (1139)
..|+++||+++|++ ..+|+||||+|++||++||+||||||||||+++|+|+++|++|+|.++|.|+...+ ...|++
T Consensus 6 ~~i~i~~l~k~~~~---~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~-~~~~~~ 81 (306)
T PRK13537 6 APIDFRNVEKRYGD---KLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRA-RHARQR 81 (306)
T ss_pred ceEEEEeEEEEECC---eEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccch-HHHHhc
Confidence 35999999999963 46999999999999999999999999999999999999999999999999998754 457899
Q ss_pred ceEEcccccccc-ccHHHHhccCCC--cCCH----HHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHH
Q 048639 964 IGLVQQEPLLFS-CSIRNNICYGNE--AASE----AEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIA 1036 (1139)
Q Consensus 964 i~~V~Qdp~LF~-gTIreNL~~~~~--~~sd----~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalA 1036 (1139)
+||+||+|.+|. .|++||+.+... ..+. +++.++++.+++.+. .++++ .+||||||||++||
T Consensus 82 ig~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~~----~~LS~G~~qrl~la 150 (306)
T PRK13537 82 VGVVPQFDNLDPDFTVRENLLVFGRYFGLSAAAARALVPPLLEFAKLENK-------ADAKV----GELSGGMKRRLTLA 150 (306)
T ss_pred EEEEeccCcCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchH-------hcCch----hhCCHHHHHHHHHH
Confidence 999999999885 699999985321 1222 345566777766543 44454 36999999999999
Q ss_pred HHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEEEecC
Q 048639 1037 RTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVVEMGS 1115 (1139)
Q Consensus 1037 RALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~ 1115 (1139)
|||+.+|++|+|||||++||+.+.+.+++.|+++. .+++|||++||+++.+.. ||||++|++|++++.|+
T Consensus 151 ~aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~---------~~g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~ 221 (306)
T PRK13537 151 RALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLL---------ARGKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGA 221 (306)
T ss_pred HHHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHH---------hCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECC
Confidence 99999999999999999999999999999999864 345569999999999976 99999999999999999
Q ss_pred hhHHhhc
Q 048639 1116 HSTLVAE 1122 (1139)
Q Consensus 1116 ~~eLl~~ 1122 (1139)
++++.+.
T Consensus 222 ~~~l~~~ 228 (306)
T PRK13537 222 PHALIES 228 (306)
T ss_pred HHHHHhc
Confidence 9999754
No 246
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-41 Score=374.92 Aligned_cols=225 Identities=29% Similarity=0.439 Sum_probs=189.3
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccC-----CccEEEECCcccC--CCCh
Q 048639 885 RIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDP-----NEGIILIDGKGIK--EYNL 957 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~--~~~l 957 (1139)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++. ..+.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 80 (253)
T PRK14267 4 AIETVNLRVYYGS---NHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDP 80 (253)
T ss_pred eEEEEeEEEEeCC---eeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccCh
Confidence 4899999999963 3599999999999999999999999999999999999987 4999999999987 4556
Q ss_pred HHHhhhceEEccccccccc-cHHHHhccCCC--------cCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChH
Q 048639 958 RRLRSQIGLVQQEPLLFSC-SIRNNICYGNE--------AASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGG 1028 (1139)
Q Consensus 958 ~~lR~~i~~V~Qdp~LF~g-TIreNL~~~~~--------~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgG 1028 (1139)
..+|++++|+||+|.+|.. |+++|+.++.. ...++++.++++..++.+.+.. .......+||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G 153 (253)
T PRK14267 81 IEVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGLVKSKKELDERVEWALKKAALWDEVKD-------RLNDYPSNLSGG 153 (253)
T ss_pred HHHhhceeEEecCCccCCCCcHHHHHHHHHHhcCccCCHHHHHHHHHHHHHHcCCccchhh-------hhccChhhCCHH
Confidence 6788999999999999975 99999986421 1112456778888887554322 123345679999
Q ss_pred HHHHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeC
Q 048639 1029 QKQRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDK 1107 (1139)
Q Consensus 1029 QrQrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~ 1107 (1139)
||||++|||||+++|++|||||||++||+.+.+.+.+.|++.. ++ +|+|++||+++.+.. ||+|++|++
T Consensus 154 ~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~---------~~-~tiii~sH~~~~~~~~~d~i~~l~~ 223 (253)
T PRK14267 154 QRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELK---------KE-YTIVLVTHSPAQAARVSDYVAFLYL 223 (253)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHh---------hC-CEEEEEECCHHHHHhhCCEEEEEEC
Confidence 9999999999999999999999999999999999999999764 33 469999999999876 999999999
Q ss_pred CEEEEecChhHHhhccCChHHH
Q 048639 1108 GEVVEMGSHSTLVAESQGVYSR 1129 (1139)
Q Consensus 1108 G~ive~G~~~eLl~~~~g~f~~ 1129 (1139)
|++++.|+++++.+++...|.+
T Consensus 224 G~i~~~~~~~~~~~~~~~~~~~ 245 (253)
T PRK14267 224 GKLIEVGPTRKVFENPEHELTE 245 (253)
T ss_pred CEEEEeCCHHHHHhCCCcHHHH
Confidence 9999999999998654333443
No 247
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=1.2e-41 Score=377.45 Aligned_cols=226 Identities=24% Similarity=0.413 Sum_probs=189.6
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChH---HHh
Q 048639 885 RIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLR---RLR 961 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~---~lR 961 (1139)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++.. .+|
T Consensus 7 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~ 83 (269)
T PRK11831 7 LVDMRGVSFTRGN---RCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVR 83 (269)
T ss_pred eEEEeCeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHHHh
Confidence 4899999999963 4699999999999999999999999999999999999999999999999998876543 357
Q ss_pred hhceEEccccccccc-cHHHHhccCCC---cCC----HHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHH
Q 048639 962 SQIGLVQQEPLLFSC-SIRNNICYGNE---AAS----EAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRI 1033 (1139)
Q Consensus 962 ~~i~~V~Qdp~LF~g-TIreNL~~~~~---~~s----d~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl 1033 (1139)
++++|+||++.+|.+ |+++|+.++.. ..+ ++++.++++..++.+.... ....||||||||+
T Consensus 84 ~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~-----------~~~~LSgGq~qrv 152 (269)
T PRK11831 84 KRMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLHSTVMMKLEAVGLRGAAKL-----------MPSELSGGMARRA 152 (269)
T ss_pred hcEEEEecccccCCCCCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHcCChhhhhC-----------ChhhCCHHHHHHH
Confidence 789999999999986 99999975311 112 2345667777777554332 2347999999999
Q ss_pred HHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEEE
Q 048639 1034 AIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVVE 1112 (1139)
Q Consensus 1034 alARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ive 1112 (1139)
+|||||+++|++|||||||++||+.+.+.+.+.|++... ..++|+|+|||+++.+.. ||+|++|++|++++
T Consensus 153 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--------~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~ 224 (269)
T PRK11831 153 ALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNS--------ALGVTCVVVSHDVPEVLSIADHAYIVADKKIVA 224 (269)
T ss_pred HHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHH--------hcCcEEEEEecCHHHHHHhhCEEEEEECCEEEE
Confidence 999999999999999999999999999999999997641 224569999999999876 99999999999999
Q ss_pred ecChhHHhhccCChHHHHHH
Q 048639 1113 MGSHSTLVAESQGVYSRLYQ 1132 (1139)
Q Consensus 1113 ~G~~~eLl~~~~g~f~~l~~ 1132 (1139)
.|+++++++++...+..++.
T Consensus 225 ~g~~~~~~~~~~~~~~~~~~ 244 (269)
T PRK11831 225 HGSAQALQANPDPRVRQFLD 244 (269)
T ss_pred eCCHHHHhcCCcHHHHHHHH
Confidence 99999998754444555554
No 248
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1e-41 Score=371.10 Aligned_cols=219 Identities=33% Similarity=0.539 Sum_probs=184.2
Q ss_pred EEEEeEEEECCCCC-CCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHH---HHh
Q 048639 257 IDIRDVCFAYPSRP-DQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLK---SLR 332 (1139)
Q Consensus 257 i~~~~v~~~y~~~~-~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~---~~~ 332 (1139)
|+++|++++|++.. ..++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+.. ..+
T Consensus 2 i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (233)
T cd03258 2 IELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKAR 81 (233)
T ss_pred eEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHH
Confidence 78999999997421 12699999999999999999999999999999999999999999999999998776543 347
Q ss_pred cceEEEecCCCCCc-ccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHH
Q 048639 333 KNIGAVSQEPSLFT-GSLMDNIKVGNM--DADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARA 409 (1139)
Q Consensus 333 ~~i~~v~Q~~~l~~-~ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARa 409 (1139)
+.++|+||++.+|. .|++||+.++.. .....+. ...+.+.++.+ |++........+||||||||++||||
T Consensus 82 ~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~a 154 (233)
T cd03258 82 RRIGMIFQHFNLLSSRTVFENVALPLEIAGVPKAEI-----EERVLELLELV--GLEDKADAYPAQLSGGQKQRVGIARA 154 (233)
T ss_pred hheEEEccCcccCCCCcHHHHHHHHHHHcCCCHHHH-----HHHHHHHHHHC--CChhhhhcChhhCCHHHHHHHHHHHH
Confidence 78999999999997 599999987532 1111111 11233455555 55555667788999999999999999
Q ss_pred HccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-C-CCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhc
Q 048639 410 IVKNPPILLLDEATSALDSESEKLVQEALERAM-Q-GRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQ 482 (1139)
Q Consensus 410 l~~~~~illlDEpts~LD~~~~~~i~~~l~~~~-~-~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 482 (1139)
|+.+|+++||||||++||+.+...+.+.++++. + ++|+|++||+++.+.. ||++++|++|++++.|+++++.+
T Consensus 155 l~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 230 (233)
T cd03258 155 LANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVVEEGTVEEVFA 230 (233)
T ss_pred HhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhc
Confidence 999999999999999999999999999998864 3 7899999999999876 99999999999999999887753
No 249
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-41 Score=369.96 Aligned_cols=212 Identities=28% Similarity=0.417 Sum_probs=180.2
Q ss_pred cEEEEeEEEECCCCC-CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHH---H
Q 048639 885 RIEFQNIKFNYPSRP-EVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRR---L 960 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~-~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~---l 960 (1139)
-|+++||+++|+++. ..++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.+||.++..++... +
T Consensus 5 ~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~ 84 (233)
T PRK11629 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAEL 84 (233)
T ss_pred eEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHHHH
Confidence 389999999997432 146999999999999999999999999999999999999999999999999998887654 3
Q ss_pred h-hhceEEccccccccc-cHHHHhccCC------CcCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHH
Q 048639 961 R-SQIGLVQQEPLLFSC-SIRNNICYGN------EAASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQR 1032 (1139)
Q Consensus 961 R-~~i~~V~Qdp~LF~g-TIreNL~~~~------~~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQr 1032 (1139)
| ++++|+||+|.+|.. |+++|+.++. +...++++.++++..++.++..+ ...+||||||||
T Consensus 85 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~-----------~~~~LSgG~~qr 153 (233)
T PRK11629 85 RNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINSRALEMLAAVGLEHRANH-----------RPSELSGGERQR 153 (233)
T ss_pred HhccEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhhC-----------ChhhCCHHHHHH
Confidence 3 679999999998875 9999997631 11123457778888877655433 235799999999
Q ss_pred HHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhcCCEEEEEeCCEEEE
Q 048639 1033 IAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVINSDVIVVMDKGEVVE 1112 (1139)
Q Consensus 1033 lalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~~DrI~vl~~G~ive 1112 (1139)
++||||++.+|+||||||||++||+++...+.+.|++... .+++|+|+|||+++.+..+|++++|++|+|++
T Consensus 154 l~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--------~~g~tvii~sH~~~~~~~~~~~~~l~~G~i~~ 225 (233)
T PRK11629 154 VAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNR--------LQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTA 225 (233)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHH--------hCCCEEEEEeCCHHHHHhhCEEEEEECCEEEE
Confidence 9999999999999999999999999999999999987630 23456999999999999999999999999998
Q ss_pred ecC
Q 048639 1113 MGS 1115 (1139)
Q Consensus 1113 ~G~ 1115 (1139)
.|+
T Consensus 226 ~~~ 228 (233)
T PRK11629 226 ELS 228 (233)
T ss_pred Eec
Confidence 775
No 250
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-41 Score=375.22 Aligned_cols=220 Identities=31% Similarity=0.534 Sum_probs=181.6
Q ss_pred ccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccC-----CCccEEEECCccCCC--CC
Q 048639 255 GNIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYD-----PSNGDILIDSLNIKD--LD 327 (1139)
Q Consensus 255 ~~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~-----~~~G~i~~~g~~~~~--~~ 327 (1139)
+.|+++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++ |++|+|.++|+++.. .+
T Consensus 5 ~~l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 81 (253)
T PRK14242 5 PKMEARGLSFFYGD---FQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVD 81 (253)
T ss_pred cEEEEeeeEEEECC---eeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccC
Confidence 35999999999963 359999999999999999999999999999999999974 689999999998864 34
Q ss_pred HHHHhcceEEEecCCCCCcccHHHHHhcCCC--CC-CHHHHHHHHHHhcHHHHHHhC--CCCCCccccccCCCCChHHHH
Q 048639 328 LKSLRKNIGAVSQEPSLFTGSLMDNIKVGNM--DA-DDEQIYNASMMANAHSFISQL--PDQYSTELGQRGVQLSGGQKQ 402 (1139)
Q Consensus 328 ~~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~--~~-~~~~~~~~~~~~~~~~~i~~l--~~g~~t~i~~~g~~LSgGqkq 402 (1139)
...+++.++|++|++.+|+.|++||+.++.. .. ..++..+ .+.+.++.+ .+......+..+.+|||||||
T Consensus 82 ~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~q 156 (253)
T PRK14242 82 VVELRRRVGMVFQKPNPFPKSIFENVAYGLRVNGVKDKAYLAE-----RVERSLRHAALWDEVKDRLHESALGLSGGQQQ 156 (253)
T ss_pred HHHHhhcEEEEecCCCCCcCcHHHHHHHHHHHcCCCCHHHHHH-----HHHHHHHHcCCchhhhHHhhCCcccCCHHHHH
Confidence 5567889999999999998999999987521 11 1111111 111222222 111123456778899999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhh
Q 048639 403 RIAIARAIVKNPPILLLDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLL 481 (1139)
Q Consensus 403 Ri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~ 481 (1139)
|++|||||+.+|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++.
T Consensus 157 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 236 (253)
T PRK14242 157 RLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKARYTIIIVTHNMQQAARVSDVTAFFYMGKLIEVGPTEQIF 236 (253)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCeEEEEEecHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999988668999999999999865 9999999999999999998886
Q ss_pred c
Q 048639 482 Q 482 (1139)
Q Consensus 482 ~ 482 (1139)
+
T Consensus 237 ~ 237 (253)
T PRK14242 237 T 237 (253)
T ss_pred c
Confidence 4
No 251
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-41 Score=377.78 Aligned_cols=216 Identities=30% Similarity=0.541 Sum_probs=188.9
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhce
Q 048639 886 IEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQIG 965 (1139)
Q Consensus 886 I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~ 965 (1139)
++++||+++|+.+ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...++++++
T Consensus 4 l~~~~l~~~~~~~--~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 81 (277)
T PRK13652 4 IETRDLCYSYSGS--KEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKFVG 81 (277)
T ss_pred EEEEEEEEEeCCC--CceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhheE
Confidence 7899999999632 35999999999999999999999999999999999999999999999999998877788899999
Q ss_pred EEcccc--ccccccHHHHhccCCC--cCC----HHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHH
Q 048639 966 LVQQEP--LLFSCSIRNNICYGNE--AAS----EAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIAR 1037 (1139)
Q Consensus 966 ~V~Qdp--~LF~gTIreNL~~~~~--~~s----d~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalAR 1037 (1139)
||||+| .+|..|+++|+.++.. ..+ ++++.++++.+++.++..+.| ..||||||||++|||
T Consensus 82 ~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~Gq~qrl~lar 150 (277)
T PRK13652 82 LVFQNPDDQIFSPTVEQDIAFGPINLGLDEETVAHRVSSALHMLGLEELRDRVP-----------HHLSGGEKKRVAIAG 150 (277)
T ss_pred EEecCcccccccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhHhcCCc-----------ccCCHHHHHHHHHHH
Confidence 999998 4788999999986421 122 345788889999887665543 479999999999999
Q ss_pred HhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEEEecCh
Q 048639 1038 TLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVVEMGSH 1116 (1139)
Q Consensus 1038 ALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~ 1116 (1139)
||+.+|++|||||||++||+.+.+.+.+.|++... ..++|+|++||+++.+.+ ||||++|++|++++.|++
T Consensus 151 aL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~--------~~g~tvli~tH~~~~~~~~~drv~~l~~G~i~~~g~~ 222 (277)
T PRK13652 151 VIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPE--------TYGMTVIFSTHQLDLVPEMADYIYVMDKGRIVAYGTV 222 (277)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH--------hcCCEEEEEecCHHHHHHhCCEEEEEECCeEEEECCH
Confidence 99999999999999999999999999999987641 124569999999999964 999999999999999999
Q ss_pred hHHhhc
Q 048639 1117 STLVAE 1122 (1139)
Q Consensus 1117 ~eLl~~ 1122 (1139)
+++++.
T Consensus 223 ~~~~~~ 228 (277)
T PRK13652 223 EEIFLQ 228 (277)
T ss_pred HHHhcC
Confidence 999754
No 252
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-41 Score=378.87 Aligned_cols=219 Identities=30% Similarity=0.530 Sum_probs=189.8
Q ss_pred cEEEEeEEEECCCCC---CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCC-hHHH
Q 048639 885 RIEFQNIKFNYPSRP---EVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYN-LRRL 960 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~---~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~-l~~l 960 (1139)
-|+++|++++|++.. ..++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.+.+ ...+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 83 (280)
T PRK13633 4 MIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWDI 83 (280)
T ss_pred eEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHHH
Confidence 489999999997421 246999999999999999999999999999999999999999999999999987654 3567
Q ss_pred hhhceEEccccc--cccccHHHHhccCCC--cC----CHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHH
Q 048639 961 RSQIGLVQQEPL--LFSCSIRNNICYGNE--AA----SEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQR 1032 (1139)
Q Consensus 961 R~~i~~V~Qdp~--LF~gTIreNL~~~~~--~~----sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQr 1032 (1139)
|++++|+||+|. +|..|+.+|+.++.. .. .++++.++++.+++.++..+.| .+||||||||
T Consensus 84 ~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LS~G~~qr 152 (280)
T PRK13633 84 RNKAGMVFQNPDNQIVATIVEEDVAFGPENLGIPPEEIRERVDESLKKVGMYEYRRHAP-----------HLLSGGQKQR 152 (280)
T ss_pred hhheEEEecChhhhhccccHHHHHHhhHhhcCCCHHHHHHHHHHHHHHCCCHhHhhCCc-----------ccCCHHHHHH
Confidence 899999999984 677799999987521 11 2456788899999988766544 4799999999
Q ss_pred HHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhcCCEEEEEeCCEEEE
Q 048639 1033 IAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVINSDVIVVMDKGEVVE 1112 (1139)
Q Consensus 1033 lalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~~DrI~vl~~G~ive 1112 (1139)
++|||||+++|++|||||||++||+.+...+.+.|+++.. ..++|||++||+++.+..||||++|++|++++
T Consensus 153 v~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~--------~~g~tillvtH~~~~~~~~d~v~~l~~G~i~~ 224 (280)
T PRK13633 153 VAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNK--------KYGITIILITHYMEEAVEADRIIVMDSGKVVM 224 (280)
T ss_pred HHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH--------hcCCEEEEEecChHHHhcCCEEEEEECCEEEE
Confidence 9999999999999999999999999999999999997640 22456999999999998899999999999999
Q ss_pred ecChhHHhhc
Q 048639 1113 MGSHSTLVAE 1122 (1139)
Q Consensus 1113 ~G~~~eLl~~ 1122 (1139)
.|+++++..+
T Consensus 225 ~g~~~~~~~~ 234 (280)
T PRK13633 225 EGTPKEIFKE 234 (280)
T ss_pred ecCHHHHhcC
Confidence 9999999754
No 253
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.7e-41 Score=344.57 Aligned_cols=222 Identities=28% Similarity=0.478 Sum_probs=192.0
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHH-hcc
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSL-RKN 334 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~-~~~ 334 (1139)
.++++|++..|+. ..+|++|||++++||+++++|+||+|||||+++|+|+.+|.+|+|.++|+|+...+++.. |..
T Consensus 3 mL~v~~l~~~YG~---~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G~I~~~G~dit~~p~~~r~r~G 79 (237)
T COG0410 3 MLEVENLSAGYGK---IQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPRSGRIIFDGEDITGLPPHERARLG 79 (237)
T ss_pred ceeEEeEeecccc---eeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeeEEECCeecCCCCHHHHHhCC
Confidence 4889999999974 459999999999999999999999999999999999999999999999999999988764 778
Q ss_pred eEEEecCCCCCcc-cHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHccC
Q 048639 335 IGAVSQEPSLFTG-SLMDNIKVGNMDADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVKN 413 (1139)
Q Consensus 335 i~~v~Q~~~l~~~-ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~~ 413 (1139)
|+||||.-.+|+. ||+||+.+|.....+++- .....++..+-+|. +......++.+|||||+|-+||||||+.+
T Consensus 80 i~~VPegR~iF~~LTVeENL~~g~~~~~~~~~----~~~~~e~v~~lFP~-Lker~~~~aG~LSGGEQQMLAiaRALm~~ 154 (237)
T COG0410 80 IAYVPEGRRIFPRLTVEENLLLGAYARRDKEA----QERDLEEVYELFPR-LKERRNQRAGTLSGGEQQMLAIARALMSR 154 (237)
T ss_pred eEeCcccccchhhCcHHHHHhhhhhccccccc----ccccHHHHHHHChh-HHHHhcCcccCCChHHHHHHHHHHHHhcC
Confidence 9999999999975 999999988432221111 11112334455663 56677888999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhccch
Q 048639 414 PPILLLDEATSALDSESEKLVQEALERAMQ--GRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQTSD 485 (1139)
Q Consensus 414 ~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~ 485 (1139)
|++|+|||||.+|-|.-.+.|.+.|+++.+ +.||++|-++...+.. |||.+||++|+|+.+|+.++|.++..
T Consensus 155 PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~~Al~iaDr~yvle~Griv~~G~~~eL~~~~~ 229 (237)
T COG0410 155 PKLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNARFALEIADRGYVLENGRIVLSGTAAELLADPD 229 (237)
T ss_pred CCEEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHHHHHHhhCEEEEEeCCEEEEecCHHHHhcCHH
Confidence 999999999999999999999999999874 6799999999998765 99999999999999999999987644
No 254
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=8.9e-42 Score=368.35 Aligned_cols=215 Identities=26% Similarity=0.475 Sum_probs=180.1
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcceE
Q 048639 257 IDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNIG 336 (1139)
Q Consensus 257 i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 336 (1139)
|+++|+++.|++. .+++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++... ...++++++
T Consensus 1 l~~~~l~~~~~~~-~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~-~~~~~~~i~ 78 (220)
T cd03263 1 LQIRNLTKTYKKG-TKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTD-RKAARQSLG 78 (220)
T ss_pred CEEEeeEEEeCCC-CceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccc-hHHHhhhEE
Confidence 4789999999642 24699999999999999999999999999999999999999999999999988654 356678899
Q ss_pred EEecCCCCC-cccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHccC
Q 048639 337 AVSQEPSLF-TGSLMDNIKVGNM--DADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVKN 413 (1139)
Q Consensus 337 ~v~Q~~~l~-~~ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~~ 413 (1139)
|++|++.++ ..|++||+.++.. ....++.. ..+.+.++.+ |+.........+||||||||++|||||+.+
T Consensus 79 ~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~al~~~ 151 (220)
T cd03263 79 YCPQFDALFDELTVREHLRFYARLKGLPKSEIK-----EEVELLLRVL--GLTDKANKRARTLSGGMKRKLSLAIALIGG 151 (220)
T ss_pred EecCcCCccccCCHHHHHHHHHHHcCCCHHHHH-----HHHHHHHHHc--CCHHHHhChhhhCCHHHHHHHHHHHHHhcC
Confidence 999999988 4699999987421 11111111 1123344444 344445566789999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhh
Q 048639 414 PPILLLDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSL 480 (1139)
Q Consensus 414 ~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l 480 (1139)
|+++||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 152 p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 219 (220)
T cd03263 152 PSVLLLDEPTSGLDPASRRAIWDLILEVRKGRSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQEL 219 (220)
T ss_pred CCEEEECCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHHHc
Confidence 9999999999999999999999999988777999999999999875 999999999999999988765
No 255
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=1.5e-41 Score=372.38 Aligned_cols=220 Identities=32% Similarity=0.536 Sum_probs=182.4
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCH---HHHhc
Q 048639 257 IDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDL---KSLRK 333 (1139)
Q Consensus 257 i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~---~~~~~ 333 (1139)
|+++|++++|+. ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. ..+++
T Consensus 2 l~~~~l~~~~~~--~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (243)
T TIGR02315 2 LEVENLSKVYPN--GKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLRR 79 (243)
T ss_pred eEEEeeeeecCC--CcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHHh
Confidence 689999999962 2469999999999999999999999999999999999999999999999999876553 34678
Q ss_pred ceEEEecCCCCCc-ccHHHHHhcCCCCCC--HHHH---HHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHH
Q 048639 334 NIGAVSQEPSLFT-GSLMDNIKVGNMDAD--DEQI---YNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIA 407 (1139)
Q Consensus 334 ~i~~v~Q~~~l~~-~ti~~ni~~g~~~~~--~~~~---~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lA 407 (1139)
+++|++|++.+|. .|++||+.++..... .... ........+.+.++.+ |+.......+.+||||||||++||
T Consensus 80 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la 157 (243)
T TIGR02315 80 RIGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERV--GLADKAYQRADQLSGGQQQRVAIA 157 (243)
T ss_pred heEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHc--CcHhhhcCCcccCCHHHHHHHHHH
Confidence 8999999999886 599999987642110 0000 0001112233445555 455556777889999999999999
Q ss_pred HHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhh
Q 048639 408 RAIVKNPPILLLDEATSALDSESEKLVQEALERAM--QGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSL 480 (1139)
Q Consensus 408 Ral~~~~~illlDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l 480 (1139)
|||+.+|++|||||||++||+.+...+.+.|+++. .++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 158 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 233 (243)
T TIGR02315 158 RALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGEIVFDGAPSEL 233 (243)
T ss_pred HHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecCCHHHh
Confidence 99999999999999999999999999999998874 37899999999999865 999999999999999999886
No 256
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=6.2e-42 Score=364.95 Aligned_cols=200 Identities=32% Similarity=0.522 Sum_probs=174.3
Q ss_pred EEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhceE
Q 048639 887 EFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQIGL 966 (1139)
Q Consensus 887 ~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~~ 966 (1139)
+++||+++|++. .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||.++.. ...|++++|
T Consensus 1 ~~~~l~~~~~~~--~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~---~~~~~~i~~ 75 (205)
T cd03226 1 RIENISFSYKKG--TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKA---KERRKSIGY 75 (205)
T ss_pred CcccEEEEeCCc--CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhh---HHhhcceEE
Confidence 368999999641 469999999999999999999999999999999999999999999999998864 456788999
Q ss_pred Ecccc--ccccccHHHHhccCCCc--CCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhcCC
Q 048639 967 VQQEP--LLFSCSIRNNICYGNEA--ASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIARTLLKR 1042 (1139)
Q Consensus 967 V~Qdp--~LF~gTIreNL~~~~~~--~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalARALlr~ 1042 (1139)
+||+| .+|..|++||+.++.+. ..++++.++++..++.++..+.| ..||||||||++|||||+++
T Consensus 76 ~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~laral~~~ 144 (205)
T cd03226 76 VMQDVDYQLFTDSVREELLLGLKELDAGNEQAETVLKDLDLYALKERHP-----------LSLSGGQKQRLAIAAALLSG 144 (205)
T ss_pred EecChhhhhhhccHHHHHhhhhhhcCccHHHHHHHHHHcCCchhcCCCc-----------hhCCHHHHHHHHHHHHHHhC
Confidence 99998 46789999999875332 22457889999999987655444 36999999999999999999
Q ss_pred CCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEE
Q 048639 1043 PAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVV 1111 (1139)
Q Consensus 1043 p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~iv 1111 (1139)
|++|||||||++||+++.+.+.+.|++.. ++++|+|++||+++.+.. ||+|++|++|+++
T Consensus 145 p~llllDEPt~~LD~~~~~~l~~~l~~~~---------~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 145 KDLLIFDEPTSGLDYKNMERVGELIRELA---------AQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred CCEEEEeCCCccCCHHHHHHHHHHHHHHH---------HCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 99999999999999999999999999764 234569999999999976 9999999999985
No 257
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=2.1e-41 Score=373.67 Aligned_cols=220 Identities=29% Similarity=0.470 Sum_probs=187.5
Q ss_pred cccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCC-------
Q 048639 883 KGRIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEY------- 955 (1139)
Q Consensus 883 ~g~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~------- 955 (1139)
.+.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...
T Consensus 3 ~~~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 79 (257)
T PRK10619 3 ENKLNVIDLHKRYGE---HEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQL 79 (257)
T ss_pred CccEEEeeeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEccccccccccc
Confidence 356999999999963 4699999999999999999999999999999999999999999999999988642
Q ss_pred ------ChHHHhhhceEEcccccccc-ccHHHHhccCC----C---cCCHHHHHHHHHHcCchHHHhhCCCCccccccCC
Q 048639 956 ------NLRRLRSQIGLVQQEPLLFS-CSIRNNICYGN----E---AASEAEIVEVSKKANIHDFISSLPDGYDTVVGEK 1021 (1139)
Q Consensus 956 ------~l~~lR~~i~~V~Qdp~LF~-gTIreNL~~~~----~---~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~ 1021 (1139)
....+|++++||||++.+|. .|++||+.++. . ...++++.++++..++.++.. ...
T Consensus 80 ~~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~----------~~~ 149 (257)
T PRK10619 80 KVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEARERAVKYLAKVGIDERAQ----------GKY 149 (257)
T ss_pred ccccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCChhhh----------hCC
Confidence 13467889999999999997 59999997531 0 112345777788888765531 223
Q ss_pred CCCCChHHHHHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CC
Q 048639 1022 GCQLSGGQKQRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SD 1100 (1139)
Q Consensus 1022 G~~LSgGQrQrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~D 1100 (1139)
...||||||||++|||||+++|++|||||||++||+.+.+.+.+.|++.. +.++|+|+|||+++.+.. ||
T Consensus 150 ~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~---------~~g~tiiivsH~~~~~~~~~d 220 (257)
T PRK10619 150 PVHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLA---------EEGKTMVVVTHEMGFARHVSS 220 (257)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHH---------hcCCEEEEEeCCHHHHHHhcC
Confidence 45799999999999999999999999999999999999999999999764 334569999999999987 99
Q ss_pred EEEEEeCCEEEEecChhHHhhccC
Q 048639 1101 VIVVMDKGEVVEMGSHSTLVAESQ 1124 (1139)
Q Consensus 1101 rI~vl~~G~ive~G~~~eLl~~~~ 1124 (1139)
||++|++|++++.|+++++.+.+.
T Consensus 221 ~i~~l~~G~i~~~~~~~~~~~~~~ 244 (257)
T PRK10619 221 HVIFLHQGKIEEEGAPEQLFGNPQ 244 (257)
T ss_pred EEEEEECCEEEEeCCHHHhhhCcc
Confidence 999999999999999999986543
No 258
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-41 Score=382.85 Aligned_cols=228 Identities=28% Similarity=0.435 Sum_probs=189.7
Q ss_pred cEEEEeEEEECCCCC-------CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCCh
Q 048639 885 RIEFQNIKFNYPSRP-------EVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNL 957 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~-------~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l 957 (1139)
-|+++|++++|+.+. ..++|+||||+|++||++||||+||||||||+++|+|+++|++|+|.+||.|+..++.
T Consensus 5 ~l~v~nl~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~~G~i~~~g~~l~~~~~ 84 (327)
T PRK11308 5 LLQAIDLKKHYPVKRGLFKPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPTGGELYYQGQDLLKADP 84 (327)
T ss_pred eEEEeeeEEEEcCCCCccccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCCCcEEEECCEEcCcCCH
Confidence 489999999996321 2469999999999999999999999999999999999999999999999999988865
Q ss_pred H---HHhhhceEEccccc--ccc-ccHHHHhccC---C----CcCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCC
Q 048639 958 R---RLRSQIGLVQQEPL--LFS-CSIRNNICYG---N----EAASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQ 1024 (1139)
Q Consensus 958 ~---~lR~~i~~V~Qdp~--LF~-gTIreNL~~~---~----~~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~ 1024 (1139)
. .+|++++||||+|. |+. -|+.+|+... . +....+++.++++.+++.+- .++.. ...
T Consensus 85 ~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~------~~~~~----p~~ 154 (327)
T PRK11308 85 EAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTSLSAAERREKALAMMAKVGLRPE------HYDRY----PHM 154 (327)
T ss_pred HHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHCCCChH------HhcCC----Ccc
Confidence 3 56789999999993 554 4888887521 0 11123467888888888531 22332 357
Q ss_pred CChHHHHHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEE
Q 048639 1025 LSGGQKQRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIV 1103 (1139)
Q Consensus 1025 LSgGQrQrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~ 1103 (1139)
||||||||++|||||+.+|+|||+||||++||..+.+.|.+.|+++.. ..++|+|+|||+++.+.. ||||+
T Consensus 155 LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~--------~~g~til~iTHdl~~~~~~adrv~ 226 (327)
T PRK11308 155 FSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQ--------ELGLSYVFISHDLSVVEHIADEVM 226 (327)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHH--------HcCCEEEEEeCCHHHHHHhCCEEE
Confidence 999999999999999999999999999999999999999999987641 224569999999999986 99999
Q ss_pred EEeCCEEEEecChhHHhhccCChHHHH
Q 048639 1104 VMDKGEVVEMGSHSTLVAESQGVYSRL 1130 (1139)
Q Consensus 1104 vl~~G~ive~G~~~eLl~~~~g~f~~l 1130 (1139)
||++|+|+|.|+++++++++...|.+.
T Consensus 227 vm~~G~ive~g~~~~~~~~p~hpyt~~ 253 (327)
T PRK11308 227 VMYLGRCVEKGTKEQIFNNPRHPYTQA 253 (327)
T ss_pred EEECCEEEEECCHHHHhcCCCCHHHHH
Confidence 999999999999999998766666653
No 259
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=2.5e-41 Score=368.47 Aligned_cols=214 Identities=32% Similarity=0.555 Sum_probs=181.8
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhce
Q 048639 886 IEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQIG 965 (1139)
Q Consensus 886 I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~ 965 (1139)
|+++|++++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+... +++++
T Consensus 2 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~-~~~i~ 77 (236)
T TIGR03864 2 LEVAGLSFAYGA---RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAA-LARLG 77 (236)
T ss_pred EEEEeeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhh-hhhEE
Confidence 789999999963 46999999999999999999999999999999999999999999999999998776543 46899
Q ss_pred EEcccccc-ccccHHHHhccCCC--cCC----HHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 048639 966 LVQQEPLL-FSCSIRNNICYGNE--AAS----EAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIART 1038 (1139)
Q Consensus 966 ~V~Qdp~L-F~gTIreNL~~~~~--~~s----d~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalARA 1038 (1139)
|+||++.+ +..|+++|+.++.. ..+ ++++.+.++..++.+. ......+||||||||++||||
T Consensus 78 ~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LS~G~~qrl~lara 146 (236)
T TIGR03864 78 VVFQQPTLDLDLSVRQNLRYHAALHGLSRAEARERIAALLARLGLAER-----------ADDKVRELNGGHRRRVEIARA 146 (236)
T ss_pred EeCCCCCCcccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhh-----------hcCChhhCCHHHHHHHHHHHH
Confidence 99999987 56899999976421 112 2345566666665433 233445799999999999999
Q ss_pred hcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhcCCEEEEEeCCEEEEecChhH
Q 048639 1039 LLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVINSDVIVVMDKGEVVEMGSHST 1118 (1139)
Q Consensus 1039 Llr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~~DrI~vl~~G~ive~G~~~e 1118 (1139)
|+++|+||||||||++||+.+.+.+.+.|++... ..++|+|++||+++.+..||+|++|++|++++.|++++
T Consensus 147 l~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--------~~~~tiii~sH~~~~~~~~d~i~~l~~G~i~~~~~~~~ 218 (236)
T TIGR03864 147 LLHRPALLLLDEPTVGLDPASRAAIVAHVRALCR--------DQGLSVLWATHLVDEIEADDRLVVLHRGRVLADGAAAE 218 (236)
T ss_pred HhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHH--------hCCCEEEEEecChhhHhhCCEEEEEeCCeEEEeCCHHH
Confidence 9999999999999999999999999999987630 12456999999999998899999999999999999999
Q ss_pred Hhhc
Q 048639 1119 LVAE 1122 (1139)
Q Consensus 1119 Ll~~ 1122 (1139)
+.+.
T Consensus 219 ~~~~ 222 (236)
T TIGR03864 219 LRGA 222 (236)
T ss_pred HHHH
Confidence 9864
No 260
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-41 Score=372.86 Aligned_cols=226 Identities=31% Similarity=0.464 Sum_probs=191.7
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccC-----CccEEEECCcccCCCChHH
Q 048639 885 RIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDP-----NEGIILIDGKGIKEYNLRR 959 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~~~~l~~ 959 (1139)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++...+...
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 79 (250)
T PRK14247 3 KIEIRDLKVSFGQ---VEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIE 79 (250)
T ss_pred eEEEEeeEEEECC---eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHH
Confidence 3899999999963 3699999999999999999999999999999999999974 6999999999998888888
Q ss_pred HhhhceEEccccccc-cccHHHHhccCCC--------cCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHH
Q 048639 960 LRSQIGLVQQEPLLF-SCSIRNNICYGNE--------AASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQK 1030 (1139)
Q Consensus 960 lR~~i~~V~Qdp~LF-~gTIreNL~~~~~--------~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQr 1030 (1139)
+|++++|+||+|.+| ..|+++|+.++.. ...++++.++++.+++.+.+. +.++.. ..+||||||
T Consensus 80 ~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~---~~~~~~----~~~LSgG~~ 152 (250)
T PRK14247 80 LRRRVQMVFQIPNPIPNLSIFENVALGLKLNRLVKSKKELQERVRWALEKAQLWDEVK---DRLDAP----AGKLSGGQQ 152 (250)
T ss_pred HhccEEEEeccCccCCCCcHHHHHHHHHHhccccCCHHHHHHHHHHHHHHcCCCcchh---hhhcCC----cccCCHHHH
Confidence 999999999999755 6799999976421 111356788888888865432 123333 457999999
Q ss_pred HHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCE
Q 048639 1031 QRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGE 1109 (1139)
Q Consensus 1031 QrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ 1109 (1139)
||++|||||+++|+||||||||++||+.+...+.+.|++.. . ++|+|++||+++.+.. ||+|++|++|+
T Consensus 153 qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~---------~-~~tiii~sH~~~~~~~~~d~i~~l~~G~ 222 (250)
T PRK14247 153 QRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELK---------K-DMTIVLVTHFPQQAARISDYVAFLYKGQ 222 (250)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHh---------c-CCEEEEEeCCHHHHHHhcCEEEEEECCe
Confidence 99999999999999999999999999999999999999764 3 3569999999999865 99999999999
Q ss_pred EEEecChhHHhhccCChHHHH
Q 048639 1110 VVEMGSHSTLVAESQGVYSRL 1130 (1139)
Q Consensus 1110 ive~G~~~eLl~~~~g~f~~l 1130 (1139)
+++.|+++++.+.+...+.+.
T Consensus 223 i~~~g~~~~~~~~~~~~~~~~ 243 (250)
T PRK14247 223 IVEWGPTREVFTNPRHELTEK 243 (250)
T ss_pred EEEECCHHHHHcCCccHHHHH
Confidence 999999999986644445433
No 261
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=1.4e-41 Score=369.83 Aligned_cols=213 Identities=28% Similarity=0.485 Sum_probs=181.4
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHH-hhhc
Q 048639 886 IEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRL-RSQI 964 (1139)
Q Consensus 886 I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~l-R~~i 964 (1139)
|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+ |+++
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 77 (232)
T cd03218 1 LRAENLSKRYGK---RKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLGI 77 (232)
T ss_pred CeEEEEEEEeCC---EEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhccE
Confidence 578999999963 369999999999999999999999999999999999999999999999999988776554 5679
Q ss_pred eEEccccccccc-cHHHHhccCCC--cCC----HHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHH
Q 048639 965 GLVQQEPLLFSC-SIRNNICYGNE--AAS----EAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIAR 1037 (1139)
Q Consensus 965 ~~V~Qdp~LF~g-TIreNL~~~~~--~~s----d~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalAR 1037 (1139)
+|+||++.+|.+ |+++|+.++.+ ... ++++.++++..++.+. ......+||||||||++|||
T Consensus 78 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrl~la~ 146 (232)
T cd03218 78 GYLPQEASIFRKLTVEENILAVLEIRGLSKKEREEKLEELLEEFHITHL-----------RKSKASSLSGGERRRVEIAR 146 (232)
T ss_pred EEecCCccccccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhh-----------hhCChhhCCHHHHHHHHHHH
Confidence 999999999986 99999986422 111 2234555666655443 23344679999999999999
Q ss_pred HhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEEEecCh
Q 048639 1038 TLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVVEMGSH 1116 (1139)
Q Consensus 1038 ALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~ 1116 (1139)
||+.+|++|||||||++||+++.+.+.+.|++.. ..++|+|++||+++.+.. ||+|++|++|++++.|++
T Consensus 147 al~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~---------~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~ 217 (232)
T cd03218 147 ALATNPKFLLLDEPFAGVDPIAVQDIQKIIKILK---------DRGIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTP 217 (232)
T ss_pred HHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHH---------HCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCH
Confidence 9999999999999999999999999999998764 334569999999988776 999999999999999999
Q ss_pred hHHhh
Q 048639 1117 STLVA 1121 (1139)
Q Consensus 1117 ~eLl~ 1121 (1139)
+++..
T Consensus 218 ~~~~~ 222 (232)
T cd03218 218 EEIAA 222 (232)
T ss_pred HHhhc
Confidence 99874
No 262
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-41 Score=390.25 Aligned_cols=220 Identities=29% Similarity=0.496 Sum_probs=191.1
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhc
Q 048639 885 RIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQI 964 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i 964 (1139)
.|+++|++++|++ .++|+|+||+|++||.++|+||||||||||+++|.|+.+|++|+|.+||.++..++. .|+++
T Consensus 19 ~l~l~~v~~~~~~---~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~i 93 (377)
T PRK11607 19 LLEIRNLTKSFDG---QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPP--YQRPI 93 (377)
T ss_pred eEEEEeEEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCH--HHCCE
Confidence 5999999999953 469999999999999999999999999999999999999999999999999987664 57889
Q ss_pred eEEccccccccc-cHHHHhccCCC--cCC----HHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHH
Q 048639 965 GLVQQEPLLFSC-SIRNNICYGNE--AAS----EAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIAR 1037 (1139)
Q Consensus 965 ~~V~Qdp~LF~g-TIreNL~~~~~--~~s----d~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalAR 1037 (1139)
+||+|++.+|.. |++||+.++.. ..+ .+++.++++..++.++.++.| .+||||||||++|||
T Consensus 94 g~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~-----------~~LSgGq~QRVaLAR 162 (377)
T PRK11607 94 NMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIASRVNEMLGLVHMQEFAKRKP-----------HQLSGGQRQRVALAR 162 (377)
T ss_pred EEEeCCCccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhcCCh-----------hhCCHHHHHHHHHHH
Confidence 999999999975 99999997632 112 346778888888876655544 479999999999999
Q ss_pred HhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEEEecCh
Q 048639 1038 TLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVVEMGSH 1116 (1139)
Q Consensus 1038 ALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~ 1116 (1139)
||+++|++|+||||||+||..+...+.+.|++... ..+.|+|+|||+++.+.. ||||+||++|++++.|+|
T Consensus 163 AL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~--------~~g~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~ 234 (377)
T PRK11607 163 SLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILE--------RVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEP 234 (377)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH--------hcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCH
Confidence 99999999999999999999999999988877641 124569999999999765 999999999999999999
Q ss_pred hHHhhccCChHH
Q 048639 1117 STLVAESQGVYS 1128 (1139)
Q Consensus 1117 ~eLl~~~~g~f~ 1128 (1139)
+++.+++...|.
T Consensus 235 ~~~~~~p~~~~~ 246 (377)
T PRK11607 235 EEIYEHPTTRYS 246 (377)
T ss_pred HHHHhCCccHHH
Confidence 999987766553
No 263
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-41 Score=375.46 Aligned_cols=215 Identities=26% Similarity=0.518 Sum_probs=186.9
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCC-hHHHhhhc
Q 048639 886 IEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYN-LRRLRSQI 964 (1139)
Q Consensus 886 I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~-l~~lR~~i 964 (1139)
|+++||+++|+. ..++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+ ...+++++
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 79 (274)
T PRK13644 2 IRLENVSYSYPD--GTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKLV 79 (274)
T ss_pred EEEEEEEEEcCC--CCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhhe
Confidence 789999999963 235999999999999999999999999999999999999999999999999998765 46778899
Q ss_pred eEEccccc--cccccHHHHhccCCCc--CC----HHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHH
Q 048639 965 GLVQQEPL--LFSCSIRNNICYGNEA--AS----EAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIA 1036 (1139)
Q Consensus 965 ~~V~Qdp~--LF~gTIreNL~~~~~~--~s----d~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalA 1036 (1139)
+|+||+|. ++..|+++|+.++... .+ ++++.++++..++.++.... ...||||||||++||
T Consensus 80 ~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~-----------~~~LS~G~~qrv~la 148 (274)
T PRK13644 80 GIVFQNPETQFVGRTVEEDLAFGPENLCLPPIEIRKRVDRALAEIGLEKYRHRS-----------PKTLSGGQGQCVALA 148 (274)
T ss_pred EEEEEChhhhcccchHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcCC-----------cccCCHHHHHHHHHH
Confidence 99999985 5678999999875211 12 34577778888887665443 357999999999999
Q ss_pred HHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhcCCEEEEEeCCEEEEecCh
Q 048639 1037 RTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVINSDVIVVMDKGEVVEMGSH 1116 (1139)
Q Consensus 1037 RALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~~DrI~vl~~G~ive~G~~ 1116 (1139)
|||+.+|+||||||||++||+.+...+++.|+++. .+++|+|++||+++.+..||+|++|++|++++.|++
T Consensus 149 ral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~---------~~g~til~~tH~~~~~~~~d~v~~l~~G~i~~~g~~ 219 (274)
T PRK13644 149 GILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLH---------EKGKTIVYITHNLEELHDADRIIVMDRGKIVLEGEP 219 (274)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHH---------hCCCEEEEEecCHHHHhhCCEEEEEECCEEEEECCH
Confidence 99999999999999999999999999999998764 334569999999999988999999999999999999
Q ss_pred hHHhhc
Q 048639 1117 STLVAE 1122 (1139)
Q Consensus 1117 ~eLl~~ 1122 (1139)
+++...
T Consensus 220 ~~~~~~ 225 (274)
T PRK13644 220 ENVLSD 225 (274)
T ss_pred HHHhcC
Confidence 998754
No 264
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.5e-42 Score=358.25 Aligned_cols=219 Identities=31% Similarity=0.550 Sum_probs=191.2
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCc---ccCCCChHHHh
Q 048639 885 RIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGK---GIKEYNLRRLR 961 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~---di~~~~l~~lR 961 (1139)
.|+++|++..|+. .++++|||++|+.||.+|+.||||||||||+++|.|+..|++|+|.+||. |.+++.. -.
T Consensus 2 ~i~i~~~~~~~~~---~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~~~--~~ 76 (345)
T COG1118 2 SIRINNVKKRFGA---FGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNLAV--RD 76 (345)
T ss_pred ceeehhhhhhccc---ccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhccch--hh
Confidence 3788999999963 46899999999999999999999999999999999999999999999999 7777433 34
Q ss_pred hhceEEcccccccc-ccHHHHhccCCC--------cCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHH
Q 048639 962 SQIGLVQQEPLLFS-CSIRNNICYGNE--------AASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQR 1032 (1139)
Q Consensus 962 ~~i~~V~Qdp~LF~-gTIreNL~~~~~--------~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQr 1032 (1139)
++||+|+|+.-||. .||++||.||.+ ...+.++.+.|+.++|..+-++-| .+||||||||
T Consensus 77 R~VGfvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~~~r~rv~elL~lvqL~~la~ryP-----------~QLSGGQrQR 145 (345)
T COG1118 77 RKVGFVFQHYALFPHMTVADNIAFGLKVRKERPSEAEIRARVEELLRLVQLEGLADRYP-----------AQLSGGQRQR 145 (345)
T ss_pred cceeEEEechhhcccchHHhhhhhcccccccCCChhhHHHHHHHHHHHhcccchhhcCc-----------hhcChHHHHH
Confidence 67999999999884 699999999862 123456777788888877766655 5799999999
Q ss_pred HHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEE
Q 048639 1033 IAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVV 1111 (1139)
Q Consensus 1033 lalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~iv 1111 (1139)
+||||||...|++|+||||.++||..-.+.+.+-|++.. +..+ +|+++|||+.+.+.. ||||+||++|+|.
T Consensus 146 VALARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~-------~~~~-~ttvfVTHD~eea~~ladrvvvl~~G~Ie 217 (345)
T COG1118 146 VALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLH-------DRLG-VTTVFVTHDQEEALELADRVVVLNQGRIE 217 (345)
T ss_pred HHHHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHH-------HhhC-ceEEEEeCCHHHHHhhcceEEEecCCeee
Confidence 999999999999999999999999999999999998764 2224 459999999999876 9999999999999
Q ss_pred EecChhHHhhccCChH
Q 048639 1112 EMGSHSTLVAESQGVY 1127 (1139)
Q Consensus 1112 e~G~~~eLl~~~~g~f 1127 (1139)
..|+|+|....|++.|
T Consensus 218 qvg~p~ev~~~P~s~f 233 (345)
T COG1118 218 QVGPPDEVYDHPASRF 233 (345)
T ss_pred eeCCHHHHhcCCCccc
Confidence 9999999998888766
No 265
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-41 Score=371.32 Aligned_cols=217 Identities=30% Similarity=0.562 Sum_probs=184.7
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcceE
Q 048639 257 IDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNIG 336 (1139)
Q Consensus 257 i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 336 (1139)
++++|++++|++. +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++
T Consensus 1 l~~~~l~~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 78 (242)
T cd03295 1 IEFENVTKRYGGG--KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKIG 78 (242)
T ss_pred CEEEEEEEEeCCc--ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcceE
Confidence 4689999999741 45999999999999999999999999999999999999999999999999998777777788999
Q ss_pred EEecCCCCCc-ccHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHHhCCCCCCc--cccccCCCCChHHHHHHHHHHHHc
Q 048639 337 AVSQEPSLFT-GSLMDNIKVGNMD--ADDEQIYNASMMANAHSFISQLPDQYST--ELGQRGVQLSGGQKQRIAIARAIV 411 (1139)
Q Consensus 337 ~v~Q~~~l~~-~ti~~ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t--~i~~~g~~LSgGqkqRi~lARal~ 411 (1139)
|++|++.+|. .|++||+.++... ...++ ....+.+.++.+ |+.. ...+.+.+||||||||++|||||+
T Consensus 79 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~-----~~~~~~~~l~~l--~l~~~~~~~~~~~~LS~G~~qrv~laral~ 151 (242)
T cd03295 79 YVIQQIGLFPHMTVEENIALVPKLLKWPKEK-----IRERADELLALV--GLDPAEFADRYPHELSGGQQQRVGVARALA 151 (242)
T ss_pred EEccCccccCCCcHHHHHHHHHHHcCCCHHH-----HHHHHHHHHHHc--CCCcHHHHhcChhhCCHHHHHHHHHHHHHh
Confidence 9999999986 5999999875311 11111 112233455655 4443 456778899999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhc
Q 048639 412 KNPPILLLDEATSALDSESEKLVQEALERAM--QGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQ 482 (1139)
Q Consensus 412 ~~~~illlDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 482 (1139)
++|+++||||||++||+.+...+.+.|+++. .++|+|++||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 152 ~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 225 (242)
T cd03295 152 ADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGTPDEILR 225 (242)
T ss_pred cCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHc
Confidence 9999999999999999999999999998875 37999999999998765 99999999999999999988754
No 266
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=1.5e-41 Score=363.05 Aligned_cols=204 Identities=26% Similarity=0.442 Sum_probs=179.0
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhce
Q 048639 886 IEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQIG 965 (1139)
Q Consensus 886 I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~ 965 (1139)
|+++||+++|++ .++|+|+||++++||.++|+|+||||||||+++|.|+++|++|+|.+||.++... ..+|++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~--~~~~~~i~ 75 (208)
T cd03268 1 LKTNDLTKTYGK---KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKN--IEALRRIG 75 (208)
T ss_pred CEEEEEEEEECC---eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccch--HHHHhhEE
Confidence 578999999953 4699999999999999999999999999999999999999999999999998764 56788999
Q ss_pred EEccccccc-cccHHHHhccCC--CcCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhcCC
Q 048639 966 LVQQEPLLF-SCSIRNNICYGN--EAASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIARTLLKR 1042 (1139)
Q Consensus 966 ~V~Qdp~LF-~gTIreNL~~~~--~~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalARALlr~ 1042 (1139)
|+||++.+| ..|++||+.++. ...+++++.++++..++.+...+. ...||||||||++||||++++
T Consensus 76 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrv~la~al~~~ 144 (208)
T cd03268 76 ALIEAPGFYPNLTARENLRLLARLLGIRKKRIDEVLDVVGLKDSAKKK-----------VKGFSLGMKQRLGIALALLGN 144 (208)
T ss_pred EecCCCccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHcCCHHHHhhh-----------HhhCCHHHHHHHHHHHHHhcC
Confidence 999999887 579999997642 123567788899999987765432 347999999999999999999
Q ss_pred CCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEEEec
Q 048639 1043 PAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVVEMG 1114 (1139)
Q Consensus 1043 p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ive~G 1114 (1139)
|++|||||||++||+.+.+.+.+.|++.. +.+.|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 145 p~llllDEPt~~LD~~~~~~l~~~l~~~~---------~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 145 PDLLILDEPTNGLDPDGIKELRELILSLR---------DQGITVLISSHLLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred CCEEEECCCcccCCHHHHHHHHHHHHHHH---------HCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999999998764 234469999999999876 9999999999999875
No 267
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-41 Score=376.44 Aligned_cols=220 Identities=27% Similarity=0.477 Sum_probs=185.8
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCC--CCCHHHHhc
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIK--DLDLKSLRK 333 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~--~~~~~~~~~ 333 (1139)
.|+++|++++|++ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. ..+...+++
T Consensus 5 ~l~~~~l~~~~~~--~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~ 82 (283)
T PRK13636 5 ILKVEELNYNYSD--GTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKLRE 82 (283)
T ss_pred eEEEEeEEEEeCC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHHHh
Confidence 5899999999963 246999999999999999999999999999999999999999999999999984 334566788
Q ss_pred ceEEEecCC--CCCcccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHH
Q 048639 334 NIGAVSQEP--SLFTGSLMDNIKVGNM--DADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARA 409 (1139)
Q Consensus 334 ~i~~v~Q~~--~l~~~ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARa 409 (1139)
.++|+||+| .+++.|++||+.++.. ..+.++..+. +.+.++.+ |+.......+.+||||||||++||||
T Consensus 83 ~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--gL~~~~~~~~~~LS~G~~qrl~lara 155 (283)
T PRK13636 83 SVGMVFQDPDNQLFSASVYQDVSFGAVNLKLPEDEVRKR-----VDNALKRT--GIEHLKDKPTHCLSFGQKKRVAIAGV 155 (283)
T ss_pred hEEEEecCcchhhccccHHHHHHhHHHHcCCCHHHHHHH-----HHHHHHHC--CChhhhhCCcccCCHHHHHHHHHHHH
Confidence 999999998 5778899999987532 1222222111 22334444 44445567788999999999999999
Q ss_pred HccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhccc
Q 048639 410 IVKNPPILLLDEATSALDSESEKLVQEALERAMQ--GRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQTS 484 (1139)
Q Consensus 410 l~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~ 484 (1139)
|+.+|++|||||||++||+.+...+.+.++++.+ |+|+|++||+++.+.. ||++++|++|++++.|+++++....
T Consensus 156 L~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~~ 233 (283)
T PRK13636 156 LVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVFAEK 233 (283)
T ss_pred HHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcCH
Confidence 9999999999999999999999999999988753 8999999999999875 9999999999999999999987643
No 268
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=1.9e-41 Score=368.93 Aligned_cols=216 Identities=25% Similarity=0.462 Sum_probs=184.2
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHH-Hhcce
Q 048639 257 IDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKS-LRKNI 335 (1139)
Q Consensus 257 i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~-~~~~i 335 (1139)
++++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... .++.+
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 77 (232)
T cd03218 1 LRAENLSKRYGK---RKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLGI 77 (232)
T ss_pred CeEEEEEEEeCC---EEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhccE
Confidence 478999999963 45999999999999999999999999999999999999999999999999987766554 35679
Q ss_pred EEEecCCCCCcc-cHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHcc
Q 048639 336 GAVSQEPSLFTG-SLMDNIKVGNMD--ADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVK 412 (1139)
Q Consensus 336 ~~v~Q~~~l~~~-ti~~ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~ 412 (1139)
+|++|++.+|+. |++||+.++.+. ...++. ...+.+.++.+ |++......+.+||||||||++|||||+.
T Consensus 78 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~al~~ 150 (232)
T cd03218 78 GYLPQEASIFRKLTVEENILAVLEIRGLSKKER-----EEKLEELLEEF--HITHLRKSKASSLSGGERRRVEIARALAT 150 (232)
T ss_pred EEecCCccccccCcHHHHHHHHHHhcCCCHHHH-----HHHHHHHHHHc--CChhhhhCChhhCCHHHHHHHHHHHHHhc
Confidence 999999999886 999999875321 111111 11233455555 56666778888999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhc
Q 048639 413 NPPILLLDEATSALDSESEKLVQEALERAM-QGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQ 482 (1139)
Q Consensus 413 ~~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 482 (1139)
+|++|||||||++||+.+.+.+.+.++++. +++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 151 ~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 222 (232)
T cd03218 151 NPKFLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEEIAA 222 (232)
T ss_pred CCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCHHHhhc
Confidence 999999999999999999999999998865 47899999999988765 99999999999999999988754
No 269
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=1.5e-40 Score=367.75 Aligned_cols=240 Identities=27% Similarity=0.428 Sum_probs=199.7
Q ss_pred HHHHHhccCCCCccCCCCccccCCCccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhcc
Q 048639 230 EIFQVIQRKPRISYSSKGKELEKIDGNIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFY 309 (1139)
Q Consensus 230 ri~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~ 309 (1139)
.+.+++..+++.. +..+.....+.|+++|+++.. +++|+|+||+|++||+++|+||||||||||+++|+|++
T Consensus 16 ~~~~~~~~~~~~~---~~~~~~~~~~~l~i~nls~~~-----~~vL~~vs~~i~~Ge~~~liG~NGsGKSTLl~~I~Gl~ 87 (282)
T cd03291 16 GFGELLEKAKQEN---NDRKHSSDDNNLFFSNLCLVG-----APVLKNINLKIEKGEMLAITGSTGSGKTSLLMLILGEL 87 (282)
T ss_pred HHHHHHhcccccc---cccccCCCCCeEEEEEEEEec-----ccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCC
Confidence 4555555443321 112223344579999999952 35999999999999999999999999999999999999
Q ss_pred CCCccEEEECCccCCCCCHHHHhcceEEEecCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCCCccc
Q 048639 310 DPSNGDILIDSLNIKDLDLKSLRKNIGAVSQEPSLFTGSLMDNIKVGNMDADDEQIYNASMMANAHSFISQLPDQYSTEL 389 (1139)
Q Consensus 310 ~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i 389 (1139)
+|++|+|.++| .|+|++|++++++.|++||+.++... ...++.+.+...++.+.+..+|.++++.+
T Consensus 88 ~p~~G~I~i~g-------------~i~yv~q~~~l~~~tv~enl~~~~~~-~~~~~~~~l~~~~l~~~l~~~~~~~~~~~ 153 (282)
T cd03291 88 EPSEGKIKHSG-------------RISFSSQFSWIMPGTIKENIIFGVSY-DEYRYKSVVKACQLEEDITKFPEKDNTVL 153 (282)
T ss_pred CCCCcEEEECC-------------EEEEEeCcccccccCHHHHhhccccc-CHHHHHHHHHHhCCHHHHHhcccccccee
Confidence 99999999988 49999999999999999999986432 23344555666667778889999999999
Q ss_pred cccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHH-HHHcCCCeEEEEecCccchhccCEEEEEeC
Q 048639 390 GQRGVQLSGGQKQRIAIARAIVKNPPILLLDEATSALDSESEKLVQEAL-ERAMQGRTVILIAHRMSTIVNADMIAVVED 468 (1139)
Q Consensus 390 ~~~g~~LSgGqkqRi~lARal~~~~~illlDEpts~LD~~~~~~i~~~l-~~~~~~~tvi~itH~~~~~~~~d~i~~l~~ 468 (1139)
++.+.+||||||||++|||||+.+|++|||||||++||+.+...+.+.+ +.+.+++|+|++||+++.+..||++++|++
T Consensus 154 ~~~~~~LSgGq~qrv~lAraL~~~p~iLiLDEPt~gLD~~~~~~l~~~ll~~~~~~~tIiiisH~~~~~~~~d~i~~l~~ 233 (282)
T cd03291 154 GEGGITLSGGQRARISLARAVYKDADLYLLDSPFGYLDVFTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILILHE 233 (282)
T ss_pred cCCCCcCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHhhCCCEEEEEeCChHHHHhCCEEEEEEC
Confidence 9999999999999999999999999999999999999999999888754 555568999999999999888999999999
Q ss_pred cEEEEecChhhhhccchHHHHHH
Q 048639 469 GQVTETGTHHSLLQTSDFYNRLF 491 (1139)
Q Consensus 469 G~i~~~g~~~~l~~~~~~~~~~~ 491 (1139)
|++++.|+++++......+...+
T Consensus 234 G~i~~~g~~~~~~~~~~~~~~~~ 256 (282)
T cd03291 234 GSSYFYGTFSELQSLRPDFSSKL 256 (282)
T ss_pred CEEEEECCHHHHHhcchHHHHHH
Confidence 99999999999876544454443
No 270
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-41 Score=376.48 Aligned_cols=219 Identities=31% Similarity=0.560 Sum_probs=191.0
Q ss_pred ccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCc---cEEEECCcccCCCChHHH
Q 048639 884 GRIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNE---GIILIDGKGIKEYNLRRL 960 (1139)
Q Consensus 884 g~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~---G~I~idG~di~~~~l~~l 960 (1139)
+.|+++|++++|++. ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++ |+|.+||.++...+...+
T Consensus 4 ~~l~i~~l~~~~~~~-~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~ 82 (282)
T PRK13640 4 NIVEFKHVSFTYPDS-KKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDI 82 (282)
T ss_pred ceEEEEEEEEEcCCC-CccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHH
Confidence 358999999999642 2469999999999999999999999999999999999999987 899999999988777788
Q ss_pred hhhceEEcccc--ccccccHHHHhccCCC--cCCH----HHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHH
Q 048639 961 RSQIGLVQQEP--LLFSCSIRNNICYGNE--AASE----AEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQR 1032 (1139)
Q Consensus 961 R~~i~~V~Qdp--~LF~gTIreNL~~~~~--~~sd----~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQr 1032 (1139)
|++++||||+| .+++.|+++||.++.. ..+. +++.++++.+++.++....| .+||||||||
T Consensus 83 ~~~ig~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----------~~LS~G~~qr 151 (282)
T PRK13640 83 REKVGIVFQNPDNQFVGATVGDDVAFGLENRAVPRPEMIKIVRDVLADVGMLDYIDSEP-----------ANLSGGQKQR 151 (282)
T ss_pred HhheEEEEECHHHhhccCCHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCChhHhcCCc-----------ccCCHHHHHH
Confidence 89999999998 4678899999986522 2233 34778889999887765544 5799999999
Q ss_pred HHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhcCCEEEEEeCCEEEE
Q 048639 1033 IAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVINSDVIVVMDKGEVVE 1112 (1139)
Q Consensus 1033 lalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~~DrI~vl~~G~ive 1112 (1139)
++|||||+.+|++|||||||++||+.+...+.+.|++... ..++|||++||+++.+..||||++|++|++++
T Consensus 152 v~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~--------~~g~tvli~tH~~~~~~~~d~i~~l~~G~i~~ 223 (282)
T PRK13640 152 VAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKK--------KNNLTVISITHDIDEANMADQVLVLDDGKLLA 223 (282)
T ss_pred HHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHH--------hcCCEEEEEecCHHHHHhCCEEEEEECCEEEE
Confidence 9999999999999999999999999999999999987641 22456999999999998899999999999999
Q ss_pred ecChhHHhhc
Q 048639 1113 MGSHSTLVAE 1122 (1139)
Q Consensus 1113 ~G~~~eLl~~ 1122 (1139)
.|++++++..
T Consensus 224 ~g~~~~~~~~ 233 (282)
T PRK13640 224 QGSPVEIFSK 233 (282)
T ss_pred eCCHHHHhcC
Confidence 9999998753
No 271
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-41 Score=389.95 Aligned_cols=207 Identities=31% Similarity=0.527 Sum_probs=179.5
Q ss_pred ccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHH----hhhceEEcccccccc-c
Q 048639 902 TVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRL----RSQIGLVQQEPLLFS-C 976 (1139)
Q Consensus 902 ~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~l----R~~i~~V~Qdp~LF~-g 976 (1139)
++|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|.+||.++..++...+ |++++||||++.+|. .
T Consensus 42 ~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~ 121 (400)
T PRK10070 42 LGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHM 121 (400)
T ss_pred EEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCC
Confidence 38999999999999999999999999999999999999999999999999998876654 357999999999996 5
Q ss_pred cHHHHhccCCC------cCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhcCCCCEEEeec
Q 048639 977 SIRNNICYGNE------AASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIARTLLKRPAIMLLDE 1050 (1139)
Q Consensus 977 TIreNL~~~~~------~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalARALlr~p~ILlLDE 1050 (1139)
|++||+.++.. ...++++.++++.+++.++..+.| .+||||||||++|||||+.+|+||||||
T Consensus 122 Tv~enl~~~~~~~~~~~~~~~~~~~e~L~~~gL~~~~~~~~-----------~~LSgGq~QRv~LArAL~~~P~iLLLDE 190 (400)
T PRK10070 122 TVLDNTAFGMELAGINAEERREKALDALRQVGLENYAHSYP-----------DELSGGMRQRVGLARALAINPDILLMDE 190 (400)
T ss_pred CHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhhhcCc-----------ccCCHHHHHHHHHHHHHhcCCCEEEEEC
Confidence 99999986421 112356778899999887766554 4799999999999999999999999999
Q ss_pred cccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEEEecChhHHhhccCChH
Q 048639 1051 ATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVVEMGSHSTLVAESQGVY 1127 (1139)
Q Consensus 1051 aTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eLl~~~~g~f 1127 (1139)
|||+||+.+.+.+++.|++... ..++|+|+|||+++.+.. ||+|++|++|++++.|+++++++++...|
T Consensus 191 Pts~LD~~~r~~l~~~L~~l~~--------~~g~TIIivTHd~~~~~~~~Dri~vL~~G~i~~~g~~~~l~~~~~~~~ 260 (400)
T PRK10070 191 AFSALDPLIRTEMQDELVKLQA--------KHQRTIVFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEILNNPANDY 260 (400)
T ss_pred CCccCCHHHHHHHHHHHHHHHH--------HCCCeEEEEECCHHHHHHhCCEEEEEECCEEEecCCHHHHHhCcccHH
Confidence 9999999999999999987630 224569999999999865 99999999999999999999987654444
No 272
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-41 Score=389.97 Aligned_cols=216 Identities=33% Similarity=0.553 Sum_probs=183.9
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcce
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNI 335 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 335 (1139)
.|+++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+.. +++|
T Consensus 3 ~l~i~~l~~~~~~---~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~~--~~~i 77 (369)
T PRK11000 3 SVTLRNVTKAYGD---VVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPPA--ERGV 77 (369)
T ss_pred EEEEEEEEEEeCC---eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHh--HCCE
Confidence 4899999999963 4599999999999999999999999999999999999999999999999998766543 4689
Q ss_pred EEEecCCCCCcc-cHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHcc
Q 048639 336 GAVSQEPSLFTG-SLMDNIKVGNM--DADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVK 412 (1139)
Q Consensus 336 ~~v~Q~~~l~~~-ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~ 412 (1139)
+||+|++.+|+. |++||+.++.. ....++.. ..+.+.++.+ |++......+.+||||||||++|||||+.
T Consensus 78 ~~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~-----~~~~~~l~~l--gL~~~~~~~~~~LSgGq~QRvaLAraL~~ 150 (369)
T PRK11000 78 GMVFQSYALYPHLSVAENMSFGLKLAGAKKEEIN-----QRVNQVAEVL--QLAHLLDRKPKALSGGQRQRVAIGRTLVA 150 (369)
T ss_pred EEEeCCcccCCCCCHHHHHHhHHhhcCCCHHHHH-----HHHHHHHHHc--CChhhhcCChhhCCHHHHHHHHHHHHHhc
Confidence 999999999975 99999998742 11222211 1223344544 45555667778999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhcc
Q 048639 413 NPPILLLDEATSALDSESEKLVQEALERAMQ--GRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQT 483 (1139)
Q Consensus 413 ~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 483 (1139)
+|++||||||||+||+.+++.+.+.|+++.+ +.|+|+|||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 151 ~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i~~~ 224 (369)
T PRK11000 151 EPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHY 224 (369)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 9999999999999999999999999988643 7899999999998865 999999999999999999998653
No 273
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.2e-42 Score=337.48 Aligned_cols=218 Identities=28% Similarity=0.466 Sum_probs=186.3
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcceE
Q 048639 257 IDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNIG 336 (1139)
Q Consensus 257 i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 336 (1139)
+++.+++++|++ ...+++||||++++||+++|.|||||||||+|++|++++.|++|.|++||.|... ++...|++||
T Consensus 2 l~v~~l~K~y~~--~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~~G~v~idg~d~~~-~p~~vrr~IG 78 (245)
T COG4555 2 LEVTDLTKSYGS--KVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPDSGKVTIDGVDTVR-DPSFVRRKIG 78 (245)
T ss_pred eeeeehhhhccC--HHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCCCceEEEeeccccc-ChHHHhhhcc
Confidence 688999999975 3458999999999999999999999999999999999999999999999999865 4567889999
Q ss_pred EEecCCCCCcc-cHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHccCCC
Q 048639 337 AVSQEPSLFTG-SLMDNIKVGNMDADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVKNPP 415 (1139)
Q Consensus 337 ~v~Q~~~l~~~-ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~~~~ 415 (1139)
+++-+..|+.. |++|||.|...- ..+.....++...+..+.+ +++..+..+..++|-|+||||+|||||++||+
T Consensus 79 Vl~~e~glY~RlT~rEnl~~Fa~L---~~l~~~~~kari~~l~k~l--~l~~~~~rRv~~~S~G~kqkV~iARAlvh~P~ 153 (245)
T COG4555 79 VLFGERGLYARLTARENLKYFARL---NGLSRKEIKARIAELSKRL--QLLEYLDRRVGEFSTGMKQKVAIARALVHDPS 153 (245)
T ss_pred eecCCcChhhhhhHHHHHHHHHHH---hhhhhhHHHHHHHHHHHHh--ChHHHHHHHHhhhchhhHHHHHHHHHHhcCCC
Confidence 99988888865 999999975210 1111111223333444444 55566777888999999999999999999999
Q ss_pred EEEEeCCCCCCCHHhHHHHHHHHHHHcC-CCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhc
Q 048639 416 ILLLDEATSALDSESEKLVQEALERAMQ-GRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQ 482 (1139)
Q Consensus 416 illlDEpts~LD~~~~~~i~~~l~~~~~-~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 482 (1139)
+++||||||+||..+.+.+.+.+.++++ |++||+.||.++.++. ||+++++.+|+++..|+.+++.+
T Consensus 154 i~vlDEP~sGLDi~~~r~~~dfi~q~k~egr~viFSSH~m~EvealCDrvivlh~Gevv~~gs~~~l~~ 222 (245)
T COG4555 154 ILVLDEPTSGLDIRTRRKFHDFIKQLKNEGRAVIFSSHIMQEVEALCDRVIVLHKGEVVLEGSIEALDA 222 (245)
T ss_pred eEEEcCCCCCccHHHHHHHHHHHHHhhcCCcEEEEecccHHHHHHhhheEEEEecCcEEEcCCHHHHHH
Confidence 9999999999999999999999998875 9999999999999985 99999999999999999998865
No 274
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=6.6e-42 Score=357.74 Aligned_cols=229 Identities=29% Similarity=0.499 Sum_probs=189.8
Q ss_pred cEEEEeEEEECCCCCC---------------------CccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCcc
Q 048639 256 NIDIRDVCFAYPSRPD---------------------QLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNG 314 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~---------------------~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G 314 (1139)
.|+++||++-|+.++. ..-++|+||+|+.||+..|.|=||||||||++++.|+++|++|
T Consensus 4 ~i~i~nv~kiFG~~~~~a~~~~~~G~~k~ei~~~tg~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept~G 83 (386)
T COG4175 4 KIEIKNVYKIFGKNPKRALKLLDQGKSKAEILKKTGLVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPTRG 83 (386)
T ss_pred eEEeecceeecccCHHHHHHHHHcCCcHHHHHHhhCcEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCCCc
Confidence 5889999998864321 1248999999999999999999999999999999999999999
Q ss_pred EEEECCccCCCCCHHHHh----cceEEEecCCCCCcc-cHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHHhCCCCCCc
Q 048639 315 DILIDSLNIKDLDLKSLR----KNIGAVSQEPSLFTG-SLMDNIKVGNMD--ADDEQIYNASMMANAHSFISQLPDQYST 387 (1139)
Q Consensus 315 ~i~~~g~~~~~~~~~~~~----~~i~~v~Q~~~l~~~-ti~~ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t 387 (1139)
+|.++|.|+..++.+++| +++++|||+.-|++- ||.||..||.+- ...++- ...+.+.++.. |++-
T Consensus 84 ~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLlPhrtVl~Nv~fGLev~Gv~~~er-----~~~a~~~l~~V--gL~~ 156 (386)
T COG4175 84 EILVDGKDIAKLSAAELRELRRKKISMVFQSFALLPHRTVLENVAFGLEVQGVPKAER-----EERALEALELV--GLEG 156 (386)
T ss_pred eEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccccchhHhhhhhcceeecCCCHHHH-----HHHHHHHHHHc--Cchh
Confidence 999999999999887664 689999999999975 999999999652 222221 11222334443 4444
Q ss_pred cccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CCeEEEEecCccchhc-cCEEE
Q 048639 388 ELGQRGVQLSGGQKQRIAIARAIVKNPPILLLDEATSALDSESEKLVQEALERAMQ--GRTVILIAHRMSTIVN-ADMIA 464 (1139)
Q Consensus 388 ~i~~~g~~LSgGqkqRi~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~itH~~~~~~~-~d~i~ 464 (1139)
.-...+.+||||+||||.|||||..+|+|||+|||+|||||--+..+++.|.++.+ +||+|+||||+++..+ .|||.
T Consensus 157 ~~~~yp~eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLdEAlriG~rIa 236 (386)
T COG4175 157 YADKYPNELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLKKTIVFITHDLDEALRIGDRIA 236 (386)
T ss_pred hhhcCcccccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHHHHHhccceEE
Confidence 45566779999999999999999999999999999999999999999998877653 7999999999999765 99999
Q ss_pred EEeCcEEEEecChhhhhccc--hHHHHHH
Q 048639 465 VVEDGQVTETGTHHSLLQTS--DFYNRLF 491 (1139)
Q Consensus 465 ~l~~G~i~~~g~~~~l~~~~--~~~~~~~ 491 (1139)
+|++|+|+..|+|+|++.++ ++.+.++
T Consensus 237 imkdG~ivQ~Gtp~eIl~~PAndYV~~Fv 265 (386)
T COG4175 237 IMKDGEIVQVGTPEEILLNPANDYVRDFV 265 (386)
T ss_pred EecCCeEEEeCCHHHHHcCccHHHHHHHH
Confidence 99999999999999998753 4444444
No 275
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-41 Score=375.24 Aligned_cols=215 Identities=27% Similarity=0.439 Sum_probs=188.5
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhc
Q 048639 885 RIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQI 964 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i 964 (1139)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+.+
T Consensus 11 ~l~i~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 87 (265)
T PRK10575 11 TFALRNVSFRVPG---RTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARKV 87 (265)
T ss_pred eEEEeeEEEEECC---EEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHHHhhhe
Confidence 4999999999963 3699999999999999999999999999999999999999999999999999888888889999
Q ss_pred eEEcccccccc-ccHHHHhccCCC----------cCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHH
Q 048639 965 GLVQQEPLLFS-CSIRNNICYGNE----------AASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRI 1033 (1139)
Q Consensus 965 ~~V~Qdp~LF~-gTIreNL~~~~~----------~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl 1033 (1139)
+|+||++.++. .|+++|+.++.. ...++++.++++.+++.++....| .+||||||||+
T Consensus 88 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LSgG~~qrv 156 (265)
T PRK10575 88 AYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRLV-----------DSLSGGERQRA 156 (265)
T ss_pred EEeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCc-----------ccCCHHHHHHH
Confidence 99999987665 499999986421 112456888899999876655433 36999999999
Q ss_pred HHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEEE
Q 048639 1034 AIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVVE 1112 (1139)
Q Consensus 1034 alARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ive 1112 (1139)
+|||||+.+|+||||||||++||+.+.+.+.+.|++... ..++|+|+|||+++.+.. ||+|++|++|++++
T Consensus 157 ~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~--------~~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~~ 228 (265)
T PRK10575 157 WIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQ--------ERGLTVIAVLHDINMAARYCDYLVALRGGEMIA 228 (265)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH--------hcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEE
Confidence 999999999999999999999999999999999987630 224569999999999965 99999999999999
Q ss_pred ecChhHHhh
Q 048639 1113 MGSHSTLVA 1121 (1139)
Q Consensus 1113 ~G~~~eLl~ 1121 (1139)
.|+++++.+
T Consensus 229 ~~~~~~~~~ 237 (265)
T PRK10575 229 QGTPAELMR 237 (265)
T ss_pred ecCHHHhcC
Confidence 999999874
No 276
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.9e-41 Score=363.14 Aligned_cols=203 Identities=30% Similarity=0.509 Sum_probs=177.5
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhce
Q 048639 886 IEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQIG 965 (1139)
Q Consensus 886 I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~ 965 (1139)
|+++||+++|++ .++|+|+||+|++| ++||+||||||||||+++|.|+++|++|+|.++|.++...+ ..+|++++
T Consensus 1 i~~~~~~~~~~~---~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~ 75 (211)
T cd03264 1 LQLENLTKRYGK---KRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQP-QKLRRRIG 75 (211)
T ss_pred CEEEEEEEEECC---EEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccch-HHHHhheE
Confidence 579999999963 36999999999999 99999999999999999999999999999999999998776 77899999
Q ss_pred EEccccccccc-cHHHHhccCC-----C-cCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 048639 966 LVQQEPLLFSC-SIRNNICYGN-----E-AASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIART 1038 (1139)
Q Consensus 966 ~V~Qdp~LF~g-TIreNL~~~~-----~-~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalARA 1038 (1139)
|+||+|.+|.+ |+++|+.+.. + ...++++.++++..++.++.+. .+ .+||||||||++||||
T Consensus 76 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~----~~LS~G~~qrv~la~a 144 (211)
T cd03264 76 YLPQEFGVYPNFTVREFLDYIAWLKGIPSKEVKARVDEVLELVNLGDRAKK-------KI----GSLSGGMRRRVGIAQA 144 (211)
T ss_pred EecCCCcccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCHHHHhC-------ch----hhCCHHHHHHHHHHHH
Confidence 99999999876 9999997531 1 1113567888888888765432 22 4699999999999999
Q ss_pred hcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEEEec
Q 048639 1039 LLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVVEMG 1114 (1139)
Q Consensus 1039 Llr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ive~G 1114 (1139)
|+++|++|||||||++||+.+.+.+.+.|++.. .+ +|+|+|||+++.+.. ||||++|++|++++.|
T Consensus 145 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~---------~~-~tii~vsH~~~~~~~~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 145 LVGDPSILIVDEPTAGLDPEERIRFRNLLSELG---------ED-RIVILSTHIVEDVESLCNQVAVLNKGKLVFEG 211 (211)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHh---------CC-CEEEEEcCCHHHHHHhCCEEEEEECCEEEecC
Confidence 999999999999999999999999999999764 33 569999999999975 9999999999999875
No 277
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5e-41 Score=373.90 Aligned_cols=223 Identities=27% Similarity=0.466 Sum_probs=186.9
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcce
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNI 335 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 335 (1139)
.|+++|++++|++....++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|+++...+...+++.+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~i 83 (277)
T PRK13642 4 ILEVENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRKI 83 (277)
T ss_pred eEEEEEEEEEcCCCCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcce
Confidence 48999999999743334699999999999999999999999999999999999999999999999999877777788899
Q ss_pred EEEecCCC--CCcccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHc
Q 048639 336 GAVSQEPS--LFTGSLMDNIKVGNM--DADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIV 411 (1139)
Q Consensus 336 ~~v~Q~~~--l~~~ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~ 411 (1139)
+|++|+|. ++..|+.|||.++.. ....+++.+.+ .+.++.+ |+.......+..||||||||++|||||+
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~-----~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~lAraL~ 156 (277)
T PRK13642 84 GMVFQNPDNQFVGATVEDDVAFGMENQGIPREEMIKRV-----DEALLAV--NMLDFKTREPARLSGGQKQRVAVAGIIA 156 (277)
T ss_pred EEEEECHHHhhccCCHHHHHHhhHHHcCCCHHHHHHHH-----HHHHHHC--CCHhHhhCCcccCCHHHHHHHHHHHHHH
Confidence 99999984 567899999987532 22333322211 1223332 3333345567899999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CCeEEEEecCccchhccCEEEEEeCcEEEEecChhhhhccch
Q 048639 412 KNPPILLLDEATSALDSESEKLVQEALERAMQ--GRTVILIAHRMSTIVNADMIAVVEDGQVTETGTHHSLLQTSD 485 (1139)
Q Consensus 412 ~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~ 485 (1139)
.+|+++||||||++||+.+.+.+.+.++++.+ |+|+|++||+++.+..||+|++|++|++++.|+++++....+
T Consensus 157 ~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~ 232 (277)
T PRK13642 157 LRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDEAASSDRILVMKAGEIIKEAAPSELFATSE 232 (277)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEECCEEEEeCCHHHHhcCHH
Confidence 99999999999999999999999999988753 799999999999998899999999999999999999876543
No 278
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=1.8e-41 Score=381.23 Aligned_cols=216 Identities=27% Similarity=0.475 Sum_probs=182.2
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcce
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNI 335 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 335 (1139)
.|+++|++++|++ ..+|+||||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+ ...|++|
T Consensus 7 ~i~i~~l~k~~~~---~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~-~~~~~~i 82 (306)
T PRK13537 7 PIDFRNVEKRYGD---KLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRA-RHARQRV 82 (306)
T ss_pred eEEEEeEEEEECC---eEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccch-HHHHhcE
Confidence 5999999999963 46999999999999999999999999999999999999999999999999987644 4578899
Q ss_pred EEEecCCCCCc-ccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHcc
Q 048639 336 GAVSQEPSLFT-GSLMDNIKVGNM--DADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVK 412 (1139)
Q Consensus 336 ~~v~Q~~~l~~-~ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~ 412 (1139)
|||||++.++. .|++||+.+... .....+..+. +.+.++.+ |+.........+||||||||++|||||+.
T Consensus 83 g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~aL~~ 155 (306)
T PRK13537 83 GVVPQFDNLDPDFTVRENLLVFGRYFGLSAAAARAL-----VPPLLEFA--KLENKADAKVGELSGGMKRRLTLARALVN 155 (306)
T ss_pred EEEeccCcCCCCCcHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHc--CCchHhcCchhhCCHHHHHHHHHHHHHhC
Confidence 99999999886 599999986321 1122222111 12334433 33333455567899999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhc
Q 048639 413 NPPILLLDEATSALDSESEKLVQEALERAM-QGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQ 482 (1139)
Q Consensus 413 ~~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 482 (1139)
+|++|+|||||++||+.+++.+.+.|+++. +|+|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 156 ~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~ 227 (306)
T PRK13537 156 DPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIE 227 (306)
T ss_pred CCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 999999999999999999999999999875 48999999999999976 99999999999999999999864
No 279
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=2.8e-41 Score=369.24 Aligned_cols=214 Identities=32% Similarity=0.542 Sum_probs=183.7
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCC--ChHHHhhh
Q 048639 886 IEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEY--NLRRLRSQ 963 (1139)
Q Consensus 886 I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~--~l~~lR~~ 963 (1139)
|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++... +...+|++
T Consensus 2 l~~~~l~~~~~~---~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 78 (240)
T PRK09493 2 IEFKNVSKHFGP---TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQE 78 (240)
T ss_pred EEEEeEEEEECC---eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhhc
Confidence 789999999963 3699999999999999999999999999999999999999999999999998764 34567889
Q ss_pred ceEEcccccccc-ccHHHHhccCCC---cC----CHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHH
Q 048639 964 IGLVQQEPLLFS-CSIRNNICYGNE---AA----SEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAI 1035 (1139)
Q Consensus 964 i~~V~Qdp~LF~-gTIreNL~~~~~---~~----sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlal 1035 (1139)
++|+||++.+|. .|+++|+.++.. .. .++++.++++..++.+.... ....||||||||++|
T Consensus 79 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~-----------~~~~LS~G~~qrv~l 147 (240)
T PRK09493 79 AGMVFQQFYLFPHLTALENVMFGPLRVRGASKEEAEKQARELLAKVGLAERAHH-----------YPSELSGGQQQRVAI 147 (240)
T ss_pred eEEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCChHHHhc-----------ChhhcCHHHHHHHHH
Confidence 999999998885 699999986421 11 12345667777776554433 335799999999999
Q ss_pred HHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEEEec
Q 048639 1036 ARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVVEMG 1114 (1139)
Q Consensus 1036 ARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ive~G 1114 (1139)
|||++++|++|+|||||++||+++...+.+.|++.. ++++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 148 a~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~---------~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g 218 (240)
T PRK09493 148 ARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLA---------EEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDG 218 (240)
T ss_pred HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHH---------HcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeC
Confidence 999999999999999999999999999999998764 334569999999999875 9999999999999999
Q ss_pred ChhHHhhc
Q 048639 1115 SHSTLVAE 1122 (1139)
Q Consensus 1115 ~~~eLl~~ 1122 (1139)
++++++++
T Consensus 219 ~~~~~~~~ 226 (240)
T PRK09493 219 DPQVLIKN 226 (240)
T ss_pred CHHHHhcC
Confidence 99999764
No 280
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.2e-41 Score=372.89 Aligned_cols=224 Identities=32% Similarity=0.487 Sum_probs=189.2
Q ss_pred ccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccc-----CCccEEEECCcccCC--CC
Q 048639 884 GRIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYD-----PNEGIILIDGKGIKE--YN 956 (1139)
Q Consensus 884 g~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~-----p~~G~I~idG~di~~--~~ 956 (1139)
..|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.+||.++.. .+
T Consensus 12 ~~l~i~nl~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~~ 88 (269)
T PRK14259 12 IIISLQNVTISYGT---FEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRVD 88 (269)
T ss_pred ceEEEEeEEEEECC---EEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccCC
Confidence 35999999999963 359999999999999999999999999999999999987 589999999999863 45
Q ss_pred hHHHhhhceEEccccccccccHHHHhccCCC--cC---CHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHH
Q 048639 957 LRRLRSQIGLVQQEPLLFSCSIRNNICYGNE--AA---SEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQ 1031 (1139)
Q Consensus 957 l~~lR~~i~~V~Qdp~LF~gTIreNL~~~~~--~~---sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQ 1031 (1139)
...+|++++|+||+|.+|..|++||+.++.. .. .++++.++++.+++.+.+. ........+|||||||
T Consensus 89 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~G~~q 161 (269)
T PRK14259 89 PVEVRRRIGMVFQQPNPFPKSIYENIAFGARINGYTGDMDELVERSLRKAAVWDECK-------DKLNESGYSLSGGQQQ 161 (269)
T ss_pred HHHHhhceEEEccCCccchhhHHHHHhhhhhhcCCcHHHHHHHHHHHHHhCCcchhh-------hhhCCCcccCCHHHHH
Confidence 6778899999999999999999999987532 11 2355677788887754332 2233445679999999
Q ss_pred HHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeC---
Q 048639 1032 RIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDK--- 1107 (1139)
Q Consensus 1032 rlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~--- 1107 (1139)
|++|||||+++|++|||||||++||+.+...+.+.|++.. .+ +|+|++||+++.+.. ||||++|++
T Consensus 162 rl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~---------~~-~tiiivtH~~~~~~~~~d~i~~l~~~~~ 231 (269)
T PRK14259 162 RLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELK---------KN-FTIVIVTHNMQQAVRVSDMTAFFNAEEV 231 (269)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHh---------cC-CEEEEEeCCHHHHHHhcCEEEEEecccc
Confidence 9999999999999999999999999999999999999764 33 569999999999876 999999996
Q ss_pred --------CEEEEecChhHHhhccCChH
Q 048639 1108 --------GEVVEMGSHSTLVAESQGVY 1127 (1139)
Q Consensus 1108 --------G~ive~G~~~eLl~~~~g~f 1127 (1139)
|+++|.|+++++++.+...|
T Consensus 232 ~~~~~g~~g~~~~~~~~~~~~~~~~~~~ 259 (269)
T PRK14259 232 EGGSGGKVGYLVEFNETKKIFNSPKQKA 259 (269)
T ss_pred ccccccccceEEEeCCHHHHHhCcCChH
Confidence 67999999999986544333
No 281
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=1.1e-41 Score=367.04 Aligned_cols=208 Identities=33% Similarity=0.531 Sum_probs=174.7
Q ss_pred EEEEeEEEECCCCC-CCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHH----HH
Q 048639 257 IDIRDVCFAYPSRP-DQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLK----SL 331 (1139)
Q Consensus 257 i~~~~v~~~y~~~~-~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~----~~ 331 (1139)
|+++|++++|++.. .+++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.. ..
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 80 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFR 80 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHH
Confidence 46899999996421 14699999999999999999999999999999999999999999999999998776543 24
Q ss_pred hcceEEEecCCCCCcc-cHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHH
Q 048639 332 RKNIGAVSQEPSLFTG-SLMDNIKVGNMD--ADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIAR 408 (1139)
Q Consensus 332 ~~~i~~v~Q~~~l~~~-ti~~ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lAR 408 (1139)
+++++|++|++.+|.. |++||+.++... ....+. ...+.+.++.+ |++......+.+||||||||++|||
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~ 153 (218)
T cd03255 81 RRHIGFVFQSFNLLPDLTALENVELPLLLAGVPKKER-----RERAEELLERV--GLGDRLNHYPSELSGGQQQRVAIAR 153 (218)
T ss_pred hhcEEEEeeccccCCCCcHHHHHHHHHhhcCCCHHHH-----HHHHHHHHHHc--CCchhhhcChhhcCHHHHHHHHHHH
Confidence 5789999999999876 999999886321 111111 12233455555 5666667778899999999999999
Q ss_pred HHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CCeEEEEecCccchhccCEEEEEeCcEE
Q 048639 409 AIVKNPPILLLDEATSALDSESEKLVQEALERAMQ--GRTVILIAHRMSTIVNADMIAVVEDGQV 471 (1139)
Q Consensus 409 al~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~itH~~~~~~~~d~i~~l~~G~i 471 (1139)
||+.+|++|||||||++||+.++..+.+.|+++.+ ++|+|++||+++.+..||++++|++|++
T Consensus 154 al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~v~~l~~G~i 218 (218)
T cd03255 154 ALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPELAEYADRIIELRDGKI 218 (218)
T ss_pred HHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhcEEEEeeCCcC
Confidence 99999999999999999999999999999998754 7999999999998878999999999974
No 282
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=3.3e-41 Score=371.26 Aligned_cols=216 Identities=34% Similarity=0.533 Sum_probs=183.1
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCC--------h
Q 048639 886 IEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYN--------L 957 (1139)
Q Consensus 886 I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~--------l 957 (1139)
|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ .
T Consensus 4 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (250)
T PRK11264 4 IEVKNLVKKFHG---QTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKGLI 80 (250)
T ss_pred EEEeceEEEECC---eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhhHH
Confidence 899999999963 35999999999999999999999999999999999999999999999999987542 3
Q ss_pred HHHhhhceEEcccccccc-ccHHHHhccCC---CcCC----HHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHH
Q 048639 958 RRLRSQIGLVQQEPLLFS-CSIRNNICYGN---EAAS----EAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQ 1029 (1139)
Q Consensus 958 ~~lR~~i~~V~Qdp~LF~-gTIreNL~~~~---~~~s----d~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQ 1029 (1139)
..+|++++||||+|.+|. .|+++|+.++. .... ++++.++++..++.+.. .....+|||||
T Consensus 81 ~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-----------~~~~~~LS~Gq 149 (250)
T PRK11264 81 RQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEATARARELLAKVGLAGKE-----------TSYPRRLSGGQ 149 (250)
T ss_pred HHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchh-----------hCChhhCChHH
Confidence 467889999999999885 69999997531 1111 23455666666664432 23456899999
Q ss_pred HHHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCC
Q 048639 1030 KQRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKG 1108 (1139)
Q Consensus 1030 rQrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G 1108 (1139)
|||++|||||+.+|++|||||||++||+.+.+.+.+.|++.. .+++|+|++||+++.+.. ||+|++|++|
T Consensus 150 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~---------~~~~tvi~~tH~~~~~~~~~d~i~~l~~G 220 (250)
T PRK11264 150 QQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLA---------QEKRTMVIVTHEMSFARDVADRAIFMDQG 220 (250)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHH---------hcCCEEEEEeCCHHHHHHhcCEEEEEECC
Confidence 999999999999999999999999999999999999998764 334569999999999976 9999999999
Q ss_pred EEEEecChhHHhhccC
Q 048639 1109 EVVEMGSHSTLVAESQ 1124 (1139)
Q Consensus 1109 ~ive~G~~~eLl~~~~ 1124 (1139)
++++.|+++++.+.+.
T Consensus 221 ~i~~~~~~~~~~~~~~ 236 (250)
T PRK11264 221 RIVEQGPAKALFADPQ 236 (250)
T ss_pred EEEEeCCHHHHhcCCC
Confidence 9999999999986533
No 283
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.3e-41 Score=366.76 Aligned_cols=214 Identities=28% Similarity=0.486 Sum_probs=180.4
Q ss_pred cEEEEeEEEECCCCC-CCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHH---H
Q 048639 256 NIDIRDVCFAYPSRP-DQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKS---L 331 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~-~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~---~ 331 (1139)
.++++|++++|+++. .+++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+... +
T Consensus 5 ~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~ 84 (233)
T PRK11629 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAEL 84 (233)
T ss_pred eEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHHHH
Confidence 489999999997422 146999999999999999999999999999999999999999999999999998776543 3
Q ss_pred h-cceEEEecCCCCCcc-cHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHH
Q 048639 332 R-KNIGAVSQEPSLFTG-SLMDNIKVGNM--DADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIA 407 (1139)
Q Consensus 332 ~-~~i~~v~Q~~~l~~~-ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lA 407 (1139)
+ +.++|++|++.+|+. |++||+.++.. ....++.. ..+.+.++.+ |++......+.+||||||||++||
T Consensus 85 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--gl~~~~~~~~~~LSgG~~qrl~la 157 (233)
T PRK11629 85 RNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEIN-----SRALEMLAAV--GLEHRANHRPSELSGGERQRVAIA 157 (233)
T ss_pred HhccEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CCchhhhCChhhCCHHHHHHHHHH
Confidence 3 679999999998875 99999987421 11122111 1223445555 555666778889999999999999
Q ss_pred HHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCCeEEEEecCccchhccCEEEEEeCcEEEEecC
Q 048639 408 RAIVKNPPILLLDEATSALDSESEKLVQEALERAM--QGRTVILIAHRMSTIVNADMIAVVEDGQVTETGT 476 (1139)
Q Consensus 408 Ral~~~~~illlDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~ 476 (1139)
||++.+|++|||||||++||+.+...+.+.|+++. +|+|+|++||+++.+..+|++++|++|++++.|+
T Consensus 158 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~~~~~~~~~~l~~G~i~~~~~ 228 (233)
T PRK11629 158 RALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELS 228 (233)
T ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhCEEEEEECCEEEEEec
Confidence 99999999999999999999999999999998874 4899999999999998889999999999998775
No 284
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-41 Score=372.67 Aligned_cols=218 Identities=30% Similarity=0.480 Sum_probs=181.2
Q ss_pred ccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCC-----CccEEEECCccCCC--CC
Q 048639 255 GNIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDP-----SNGDILIDSLNIKD--LD 327 (1139)
Q Consensus 255 ~~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~-----~~G~i~~~g~~~~~--~~ 327 (1139)
..++++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|+++.. .+
T Consensus 6 ~~l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 82 (254)
T PRK14273 6 AIIETENLNLFYTD---FKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFD 82 (254)
T ss_pred ceEEEeeeEEEeCC---ceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEeccccccc
Confidence 35999999999963 3599999999999999999999999999999999999997 48999999998753 33
Q ss_pred HHHHhcceEEEecCCCCCcccHHHHHhcCCCC---CCHH----HHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHH
Q 048639 328 LKSLRKNIGAVSQEPSLFTGSLMDNIKVGNMD---ADDE----QIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQ 400 (1139)
Q Consensus 328 ~~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~---~~~~----~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGq 400 (1139)
...++++++|++|++.+|+.|++|||.++... ...+ .+.++++..++. .++.......+.+|||||
T Consensus 83 ~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-------~~l~~~~~~~~~~LSgG~ 155 (254)
T PRK14273 83 ILELRRKIGMVFQTPNPFLMSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALW-------NEVKDKLNTNALSLSGGQ 155 (254)
T ss_pred HHHHhhceEEEeeccccccCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCc-------hhhHHHHhCCcccCCHHH
Confidence 45678899999999999989999999886321 1111 122222222111 111123455678999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhh
Q 048639 401 KQRIAIARAIVKNPPILLLDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHS 479 (1139)
Q Consensus 401 kqRi~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~ 479 (1139)
|||++|||||+.+|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 156 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 235 (254)
T PRK14273 156 QQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKESYTIIIVTHNMQQAGRISDRTAFFLNGCIEEESSTDE 235 (254)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999988778999999999999865 99999999999999999999
Q ss_pred hhc
Q 048639 480 LLQ 482 (1139)
Q Consensus 480 l~~ 482 (1139)
+.+
T Consensus 236 ~~~ 238 (254)
T PRK14273 236 LFF 238 (254)
T ss_pred HHh
Confidence 864
No 285
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=2.6e-41 Score=368.24 Aligned_cols=216 Identities=27% Similarity=0.473 Sum_probs=184.2
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcceE
Q 048639 257 IDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNIG 336 (1139)
Q Consensus 257 i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 336 (1139)
++++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... ++.++
T Consensus 2 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~-~~~i~ 77 (236)
T TIGR03864 2 LEVAGLSFAYGA---RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAA-LARLG 77 (236)
T ss_pred EEEEeeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhh-hhhEE
Confidence 789999999963 46999999999999999999999999999999999999999999999999987665543 45899
Q ss_pred EEecCCCCC-cccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHccC
Q 048639 337 AVSQEPSLF-TGSLMDNIKVGNM--DADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVKN 413 (1139)
Q Consensus 337 ~v~Q~~~l~-~~ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~~ 413 (1139)
|++|++.++ ..|++||+.++.. ....++.. ..+.+.++.+ |++......+.+||||||||++|||||+++
T Consensus 78 ~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrl~laral~~~ 150 (236)
T TIGR03864 78 VVFQQPTLDLDLSVRQNLRYHAALHGLSRAEAR-----ERIAALLARL--GLAERADDKVRELNGGHRRRVEIARALLHR 150 (236)
T ss_pred EeCCCCCCcccCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CChhhhcCChhhCCHHHHHHHHHHHHHhcC
Confidence 999999885 5699999987532 11122111 1233455555 566667788889999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCCeEEEEecCccchhccCEEEEEeCcEEEEecChhhhhcc
Q 048639 414 PPILLLDEATSALDSESEKLVQEALERAM--QGRTVILIAHRMSTIVNADMIAVVEDGQVTETGTHHSLLQT 483 (1139)
Q Consensus 414 ~~illlDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 483 (1139)
|+++||||||++||+.+.+.+.+.|+++. +++|+|++||+++.+..||++++|++|++++.|+++++.+.
T Consensus 151 p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 222 (236)
T TIGR03864 151 PALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDEIEADDRLVVLHRGRVLADGAAAELRGA 222 (236)
T ss_pred CCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhhHhhCCEEEEEeCCeEEEeCCHHHHHHH
Confidence 99999999999999999999999998875 47999999999999878999999999999999999887653
No 286
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=1.8e-41 Score=365.42 Aligned_cols=211 Identities=24% Similarity=0.456 Sum_probs=177.6
Q ss_pred EEEEeEEEECCCCCC-CccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcce
Q 048639 257 IDIRDVCFAYPSRPD-QLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNI 335 (1139)
Q Consensus 257 i~~~~v~~~y~~~~~-~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 335 (1139)
|+++|++++|++... .++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|+++.. ...++++++
T Consensus 2 l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-~~~~~~~~i 80 (218)
T cd03266 2 ITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVK-EPAEARRRL 80 (218)
T ss_pred eEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEccc-CHHHHHhhE
Confidence 689999999974311 169999999999999999999999999999999999999999999999999865 345678899
Q ss_pred EEEecCCCCCcc-cHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHcc
Q 048639 336 GAVSQEPSLFTG-SLMDNIKVGNM--DADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVK 412 (1139)
Q Consensus 336 ~~v~Q~~~l~~~-ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~ 412 (1139)
+|++|++.+|.. |++||+.+... ....++..+ .+.+.++.+ |++......+.+||||||||++||||++.
T Consensus 81 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral~~ 153 (218)
T cd03266 81 GFVSDSTGLYDRLTARENLEYFAGLYGLKGDELTA-----RLEELADRL--GMEELLDRRVGGFSTGMRQKVAIARALVH 153 (218)
T ss_pred EEecCCcccCcCCCHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CCHHHHhhhhhhcCHHHHHHHHHHHHHhc
Confidence 999999999885 99999976421 111222111 223445555 55556677888999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCCeEEEEecCccchhc-cCEEEEEeCcEEEEec
Q 048639 413 NPPILLLDEATSALDSESEKLVQEALERAM-QGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETG 475 (1139)
Q Consensus 413 ~~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g 475 (1139)
+|+++||||||++||+.+.+.+.+.|+++. +++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 154 ~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 154 DPPVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred CCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 999999999999999999999999998874 48999999999998875 9999999999998754
No 287
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-41 Score=377.58 Aligned_cols=218 Identities=31% Similarity=0.543 Sum_probs=183.9
Q ss_pred cEEEEeEEEECCCCC--CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCC----ChH
Q 048639 885 RIEFQNIKFNYPSRP--EVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEY----NLR 958 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~--~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~----~l~ 958 (1139)
.|+++||+++|++.. ..++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++... +..
T Consensus 2 ~i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13641 2 SIKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLK 81 (287)
T ss_pred EEEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 378999999996321 14699999999999999999999999999999999999999999999999998653 345
Q ss_pred HHhhhceEEcccc--ccccccHHHHhccCCC--cCC----HHHHHHHHHHcCch-HHHhhCCCCccccccCCCCCCChHH
Q 048639 959 RLRSQIGLVQQEP--LLFSCSIRNNICYGNE--AAS----EAEIVEVSKKANIH-DFISSLPDGYDTVVGEKGCQLSGGQ 1029 (1139)
Q Consensus 959 ~lR~~i~~V~Qdp--~LF~gTIreNL~~~~~--~~s----d~ei~~al~~~~l~-~~i~~lp~gldt~v~e~G~~LSgGQ 1029 (1139)
..|+.++|+||+| .+|..|+++|+.++.. ..+ ++.+.++++.+++. ++.. .....|||||
T Consensus 82 ~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~-----------~~~~~LSgGq 150 (287)
T PRK13641 82 KLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNFGFSEDEAKEKALKWLKKVGLSEDLIS-----------KSPFELSGGQ 150 (287)
T ss_pred HHHhceEEEEeChhhhhccchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhHhh-----------CCcccCCHHH
Confidence 6788999999998 5788899999976421 122 23456677777774 3322 2345799999
Q ss_pred HHHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCC
Q 048639 1030 KQRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKG 1108 (1139)
Q Consensus 1030 rQrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G 1108 (1139)
|||++|||||+.+|++|||||||++||+.+...+.+.|++.. +.++|||++||+++.+.. ||+|++|++|
T Consensus 151 ~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~---------~~g~tvlivsH~~~~~~~~~d~v~~l~~G 221 (287)
T PRK13641 151 MRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQ---------KAGHTVILVTHNMDDVAEYADDVLVLEHG 221 (287)
T ss_pred HHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHH---------hCCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 999999999999999999999999999999999999999764 345679999999999875 9999999999
Q ss_pred EEEEecChhHHhhc
Q 048639 1109 EVVEMGSHSTLVAE 1122 (1139)
Q Consensus 1109 ~ive~G~~~eLl~~ 1122 (1139)
++++.|+++++.+.
T Consensus 222 ~i~~~g~~~~~~~~ 235 (287)
T PRK13641 222 KLIKHASPKEIFSD 235 (287)
T ss_pred EEEEeCCHHHHhcC
Confidence 99999999998753
No 288
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-41 Score=372.78 Aligned_cols=222 Identities=29% Similarity=0.468 Sum_probs=188.1
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccc-----CCccEEEECCcccCCCC--hH
Q 048639 886 IEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYD-----PNEGIILIDGKGIKEYN--LR 958 (1139)
Q Consensus 886 I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~-----p~~G~I~idG~di~~~~--l~ 958 (1139)
-+++||+++|++ .++|+|+||+|++||.+||+|+||||||||+++|+|++. |.+|+|.++|.++...+ ..
T Consensus 6 ~~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 82 (251)
T PRK14244 6 ASVKNLNLWYGS---KQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVV 82 (251)
T ss_pred EEeeeEEEEECC---eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchH
Confidence 468999999963 469999999999999999999999999999999999986 46999999999987643 34
Q ss_pred HHhhhceEEccccccccccHHHHhccCCC--c------CCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHH
Q 048639 959 RLRSQIGLVQQEPLLFSCSIRNNICYGNE--A------ASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQK 1030 (1139)
Q Consensus 959 ~lR~~i~~V~Qdp~LF~gTIreNL~~~~~--~------~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQr 1030 (1139)
.+|++++|+||++.+|.+|+++|+.++.. . ..++++.++++..++.+++. +.++..+.+||||||
T Consensus 83 ~~~~~i~~v~q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~Gq~ 155 (251)
T PRK14244 83 LLRAKVGMVFQKPNPFPKSIYDNVAYGPKLHGLAKNKKKLDEIVEKSLTSVGLWEELG-------DRLKDSAFELSGGQQ 155 (251)
T ss_pred HHhhhEEEEecCcccccCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCchhh-------hHhhcChhhCCHHHH
Confidence 67889999999999999999999986411 1 12345778888888865432 123344568999999
Q ss_pred HHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCE
Q 048639 1031 QRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGE 1109 (1139)
Q Consensus 1031 QrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ 1109 (1139)
||++|||||+++|+||||||||++||+.+.+.+.+.|++.. + ++|+|+|||+++.+.. ||||++|++|+
T Consensus 156 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~---------~-~~tiiiisH~~~~~~~~~d~i~~l~~G~ 225 (251)
T PRK14244 156 QRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELK---------K-NFTIIVVTHSMKQAKKVSDRVAFFQSGR 225 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh---------c-CCeEEEEeCCHHHHHhhcCEEEEEECCE
Confidence 99999999999999999999999999999999999999764 3 3569999999999876 99999999999
Q ss_pred EEEecChhHHhhccCChH
Q 048639 1110 VVEMGSHSTLVAESQGVY 1127 (1139)
Q Consensus 1110 ive~G~~~eLl~~~~g~f 1127 (1139)
+++.|+++++.+.+...|
T Consensus 226 i~~~~~~~~~~~~~~~~~ 243 (251)
T PRK14244 226 IVEYNTTQEIFKNPQSSK 243 (251)
T ss_pred EEEeCCHHHHhcCCCChH
Confidence 999999999987655544
No 289
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-41 Score=372.61 Aligned_cols=221 Identities=30% Similarity=0.443 Sum_probs=189.7
Q ss_pred ccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccc-----CCccEEEECCcccCC--CC
Q 048639 884 GRIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYD-----PNEGIILIDGKGIKE--YN 956 (1139)
Q Consensus 884 g~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~-----p~~G~I~idG~di~~--~~ 956 (1139)
..|+++||+++|++ .++|+|+||+|++||.+||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+
T Consensus 19 ~~l~~~nl~~~~~~---~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~ 95 (267)
T PRK14237 19 IALSTKDLHVYYGK---KEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEIN 95 (267)
T ss_pred eEEEEeeEEEEECC---eeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCC
Confidence 36999999999953 469999999999999999999999999999999999997 479999999999864 34
Q ss_pred hHHHhhhceEEccccccccccHHHHhccCCC--c-----CCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHH
Q 048639 957 LRRLRSQIGLVQQEPLLFSCSIRNNICYGNE--A-----ASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQ 1029 (1139)
Q Consensus 957 l~~lR~~i~~V~Qdp~LF~gTIreNL~~~~~--~-----~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQ 1029 (1139)
...+|+.++||||++.+|..|+++|+.++.. . ..++++.++++..++.+.+.. ........|||||
T Consensus 96 ~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~-------~~~~~~~~LS~G~ 168 (267)
T PRK14237 96 VYEMRKHIGMVFQRPNPFAKSIYENITFALERAGVKDKKVLDEIVETSLKQAALWDQVKD-------DLHKSALTLSGGQ 168 (267)
T ss_pred hHHHhcceEEEecCCccccccHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCchhhh-------hhcCCcccCCHHH
Confidence 5678899999999999999999999986421 1 123456778888888655432 2345567899999
Q ss_pred HHHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCC
Q 048639 1030 KQRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKG 1108 (1139)
Q Consensus 1030 rQrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G 1108 (1139)
|||+||||||+++|++|||||||++||+.+...+.+.|++.. . ++|+|+|||+++.+.. ||+|++|++|
T Consensus 169 ~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~---------~-~~tiii~tH~~~~~~~~~d~i~~l~~G 238 (267)
T PRK14237 169 QQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELK---------K-NYTIIIVTHNMQQAARASDYTAFFYLG 238 (267)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh---------c-CCEEEEEecCHHHHHHhcCEEEEEECC
Confidence 999999999999999999999999999999999999999764 3 3569999999999866 9999999999
Q ss_pred EEEEecChhHHhhccC
Q 048639 1109 EVVEMGSHSTLVAESQ 1124 (1139)
Q Consensus 1109 ~ive~G~~~eLl~~~~ 1124 (1139)
++++.|+++++.+.+.
T Consensus 239 ~i~~~g~~~~~~~~~~ 254 (267)
T PRK14237 239 DLIEYDKTRNIFTNPK 254 (267)
T ss_pred EEEEeCCHHHHhcCCC
Confidence 9999999999986533
No 290
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-41 Score=372.20 Aligned_cols=221 Identities=28% Similarity=0.499 Sum_probs=191.3
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhce
Q 048639 886 IEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQIG 965 (1139)
Q Consensus 886 I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~ 965 (1139)
|+++|++++|++ .++|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.+||.++..++...+++.++
T Consensus 3 l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (255)
T PRK11231 3 LRTENLTVGYGT---KRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLARRLA 79 (255)
T ss_pred EEEEeEEEEECC---EEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhhheE
Confidence 789999999963 46999999999999999999999999999999999999999999999999998888888889999
Q ss_pred EEccccccccc-cHHHHhccCCC----------cCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHH
Q 048639 966 LVQQEPLLFSC-SIRNNICYGNE----------AASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIA 1034 (1139)
Q Consensus 966 ~V~Qdp~LF~g-TIreNL~~~~~----------~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrla 1034 (1139)
|+||++.+|.+ |+++|++++.. ...++++.++++..++.++.+.. ...||||||||++
T Consensus 80 ~~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrv~ 148 (255)
T PRK11231 80 LLPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHLADRR-----------LTDLSGGQRQRAF 148 (255)
T ss_pred EecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHHHcCC-----------cccCCHHHHHHHH
Confidence 99999998876 99999987521 11234577788888887654432 3579999999999
Q ss_pred HHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEEEe
Q 048639 1035 IARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVVEM 1113 (1139)
Q Consensus 1035 lARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ive~ 1113 (1139)
||||++++|++|||||||++||+++.+.+.+.|++.. ..++|+|++||+++.+.. ||+|++|++|++++.
T Consensus 149 laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~---------~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~ 219 (255)
T PRK11231 149 LAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELN---------TQGKTVVTVLHDLNQASRYCDHLVVLANGHVMAQ 219 (255)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHH---------HCCCEEEEEECCHHHHHHhcCEEEEEECCeEEEE
Confidence 9999999999999999999999999999999998764 234569999999999876 999999999999999
Q ss_pred cChhHHhhccCChHHHHH
Q 048639 1114 GSHSTLVAESQGVYSRLY 1131 (1139)
Q Consensus 1114 G~~~eLl~~~~g~f~~l~ 1131 (1139)
|+++++... ..+.+.+
T Consensus 220 ~~~~~~~~~--~~~~~~~ 235 (255)
T PRK11231 220 GTPEEVMTP--GLLRTVF 235 (255)
T ss_pred cCHHHhcCH--HHHHHHh
Confidence 999998753 3445544
No 291
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-41 Score=373.32 Aligned_cols=220 Identities=34% Similarity=0.494 Sum_probs=186.2
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccc-----CCccEEEECCcccCC--CCh
Q 048639 885 RIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYD-----PNEGIILIDGKGIKE--YNL 957 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~-----p~~G~I~idG~di~~--~~l 957 (1139)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+.
T Consensus 21 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 97 (268)
T PRK14248 21 ILEVKDLSIYYGE---KRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNINV 97 (268)
T ss_pred eEEEEEEEEEeCC---ceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEcccccccH
Confidence 4999999999963 469999999999999999999999999999999999865 689999999999865 344
Q ss_pred HHHhhhceEEccccccccccHHHHhccCCC---c----CCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHH
Q 048639 958 RRLRSQIGLVQQEPLLFSCSIRNNICYGNE---A----ASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQK 1030 (1139)
Q Consensus 958 ~~lR~~i~~V~Qdp~LF~gTIreNL~~~~~---~----~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQr 1030 (1139)
..+|++++|+||++.+|.+|+++|+.++.. . ..++.+.++++..++.+.+. ........+||||||
T Consensus 98 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgGq~ 170 (268)
T PRK14248 98 VNLRREIGMVFQKPNPFPKSIYNNITHALKYAGERRKSVLDEIVEESLTKAALWDEVK-------DRLHSSALSLSGGQQ 170 (268)
T ss_pred HHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCCcchH-------HHHhcCcccCCHHHH
Confidence 567889999999999999999999986421 1 11345677777777753221 122344568999999
Q ss_pred HHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCE
Q 048639 1031 QRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGE 1109 (1139)
Q Consensus 1031 QrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ 1109 (1139)
||++|||||+++|+||||||||++||+.+...+.+.|++.. .+ +|||++||+++.+.. ||||++|++|+
T Consensus 171 qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~---------~~-~tiii~tH~~~~~~~~~d~v~~l~~G~ 240 (268)
T PRK14248 171 QRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELK---------EE-YSIIIVTHNMQQALRVSDRTAFFLNGD 240 (268)
T ss_pred HHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHh---------cC-CEEEEEEeCHHHHHHhCCEEEEEECCE
Confidence 99999999999999999999999999999999999999764 33 569999999998875 99999999999
Q ss_pred EEEecChhHHhhccC
Q 048639 1110 VVEMGSHSTLVAESQ 1124 (1139)
Q Consensus 1110 ive~G~~~eLl~~~~ 1124 (1139)
+++.|+++++.+++.
T Consensus 241 i~~~~~~~~~~~~~~ 255 (268)
T PRK14248 241 LVEYDQTEQIFTSPK 255 (268)
T ss_pred EEEeCCHHHHHhCCC
Confidence 999999999986543
No 292
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.1e-41 Score=371.46 Aligned_cols=223 Identities=35% Similarity=0.504 Sum_probs=188.1
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccC-----CccEEEECCcccCCC--Ch
Q 048639 885 RIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDP-----NEGIILIDGKGIKEY--NL 957 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~~~--~l 957 (1139)
.|+++|++++|++ .++|+|+||+|++||.+||+|+||||||||+++|.|+++| ++|+|.+||.++... +.
T Consensus 12 ~l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 88 (258)
T PRK14268 12 QIKVENLNLWYGE---KQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDV 88 (258)
T ss_pred eEEEeeeEEEeCC---eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchH
Confidence 5999999999963 3599999999999999999999999999999999999985 799999999998653 24
Q ss_pred HHHhhhceEEccccccccccHHHHhccCCC--cCC----HHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHH
Q 048639 958 RRLRSQIGLVQQEPLLFSCSIRNNICYGNE--AAS----EAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQ 1031 (1139)
Q Consensus 958 ~~lR~~i~~V~Qdp~LF~gTIreNL~~~~~--~~s----d~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQ 1031 (1139)
..+|++++|+||++.+|..|+++|+.++.. ..+ ++++.++++.+++.+.+. +.+++ ....|||||||
T Consensus 89 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~---~~~~~----~~~~LSgG~~q 161 (258)
T PRK14268 89 VELRKNVGMVFQKPNPFPMSIYDNVAYGPRIHGANKKDLDGVVENALRSAALWDETS---DRLKS----PALSLSGGQQQ 161 (258)
T ss_pred HHHhhhEEEEecCCccCcccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcchh---hhhcC----ChhhCCHHHHH
Confidence 467889999999999999999999986421 112 234677888888754321 12333 34579999999
Q ss_pred HHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEE
Q 048639 1032 RIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEV 1110 (1139)
Q Consensus 1032 rlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~i 1110 (1139)
|++|||||+.+|+||||||||++||+++...+.+.|++.. + ++|+|++||+++.+.+ ||||++|++|++
T Consensus 162 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~---------~-~~tiiivsH~~~~~~~~~d~i~~l~~G~i 231 (258)
T PRK14268 162 RLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLK---------K-DYTIVIVTHNMQQAARISDYTGFFLMGEL 231 (258)
T ss_pred HHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHh---------h-CCEEEEEECCHHHHHHhCCEEEEEECCEE
Confidence 9999999999999999999999999999999999999764 3 3569999999999876 999999999999
Q ss_pred EEecChhHHhhccCChH
Q 048639 1111 VEMGSHSTLVAESQGVY 1127 (1139)
Q Consensus 1111 ve~G~~~eLl~~~~g~f 1127 (1139)
++.|+++++.+++...|
T Consensus 232 ~~~~~~~~~~~~~~~~~ 248 (258)
T PRK14268 232 IEFGQTRQIFHNPREKS 248 (258)
T ss_pred EEeCCHHHHhcCCCCHH
Confidence 99999999986644444
No 293
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=5.5e-41 Score=357.42 Aligned_cols=200 Identities=34% Similarity=0.570 Sum_probs=178.5
Q ss_pred EEEEeEEEECCCCCC--CccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcc
Q 048639 257 IDIRDVCFAYPSRPD--QLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKN 334 (1139)
Q Consensus 257 i~~~~v~~~y~~~~~--~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~ 334 (1139)
++++||+++|++..+ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++| +
T Consensus 1 l~~~~l~~~~~~~~~~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G~i~~~g-------------~ 67 (204)
T cd03250 1 ISVEDASFTWDSGEQETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSVSVPG-------------S 67 (204)
T ss_pred CEEeEEEEecCCCCccccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCCeEEEcC-------------E
Confidence 478999999975311 3699999999999999999999999999999999999999999999998 6
Q ss_pred eEEEecCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHccCC
Q 048639 335 IGAVSQEPSLFTGSLMDNIKVGNMDADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVKNP 414 (1139)
Q Consensus 335 i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~~~ 414 (1139)
|+|++|+|.+|+.|++||+.++.. ...++..++++...+.+++..+|.|+++.+++++.+||||||||++|||||+.+|
T Consensus 68 i~~~~q~~~l~~~t~~enl~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~lS~G~~qrv~laral~~~p 146 (204)
T cd03250 68 IAYVSQEPWIQNGTIRENILFGKP-FDEERYEKVIKACALEPDLEILPDGDLTEIGEKGINLSGGQKQRISLARAVYSDA 146 (204)
T ss_pred EEEEecCchhccCcHHHHhccCCC-cCHHHHHHHHHHcCcHHHHHhccCcccceecCCCCcCCHHHHHHHHHHHHHhcCC
Confidence 999999999999999999998643 3345566667777778889999999999999999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHhHHHHHH-HHHHHc-CCCeEEEEecCccchhccCEEEEEeCcE
Q 048639 415 PILLLDEATSALDSESEKLVQE-ALERAM-QGRTVILIAHRMSTIVNADMIAVVEDGQ 470 (1139)
Q Consensus 415 ~illlDEpts~LD~~~~~~i~~-~l~~~~-~~~tvi~itH~~~~~~~~d~i~~l~~G~ 470 (1139)
+++||||||++||+++.+.+.+ .+.... +++|+|++||+++.+..||++++|++|+
T Consensus 147 ~llllDEP~~~LD~~~~~~l~~~ll~~~~~~~~tvi~~sh~~~~~~~~d~i~~l~~G~ 204 (204)
T cd03250 147 DIYLLDDPLSAVDAHVGRHIFENCILGLLLNNKTRILVTHQLQLLPHADQIVVLDNGR 204 (204)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHHhccCCCEEEEEeCCHHHHhhCCEEEEEeCCC
Confidence 9999999999999999888877 455553 4789999999999988899999999985
No 294
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.3e-41 Score=370.38 Aligned_cols=220 Identities=34% Similarity=0.544 Sum_probs=183.8
Q ss_pred ccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccC-----CCccEEEECCccCCC--CC
Q 048639 255 GNIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYD-----PSNGDILIDSLNIKD--LD 327 (1139)
Q Consensus 255 ~~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~-----~~~G~i~~~g~~~~~--~~ 327 (1139)
+.++++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|+++.. .+
T Consensus 12 ~~l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~ 88 (260)
T PRK10744 12 SKIQVRNLNFYYGK---FHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQD 88 (260)
T ss_pred ceEEEEEEEEEeCC---eEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccccccc
Confidence 46999999999963 369999999999999999999999999999999999986 589999999998853 34
Q ss_pred HHHHhcceEEEecCCCCCcccHHHHHhcCCC---CCCHHHHHHHHHHhcHHHHHHhC--CCCCCccccccCCCCChHHHH
Q 048639 328 LKSLRKNIGAVSQEPSLFTGSLMDNIKVGNM---DADDEQIYNASMMANAHSFISQL--PDQYSTELGQRGVQLSGGQKQ 402 (1139)
Q Consensus 328 ~~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~---~~~~~~~~~~~~~~~~~~~i~~l--~~g~~t~i~~~g~~LSgGqkq 402 (1139)
...++++|+|++|++.+|+.|++||+.++.. ..+.++..+ .+.+.++.+ ..++....++.+.+|||||||
T Consensus 89 ~~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~q 163 (260)
T PRK10744 89 IALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRAEMDE-----RVEWALTKAALWNEVKDKLHQSGYSLSGGQQQ 163 (260)
T ss_pred hHHHhcceEEEecCCccCcCcHHHHHhhhHhhcCCCCHHHHHH-----HHHHHHHHcCCChhhHHHHhcCCCCCCHHHHH
Confidence 5677889999999999999999999987532 112221111 112223332 111234456778899999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhh
Q 048639 403 RIAIARAIVKNPPILLLDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLL 481 (1139)
Q Consensus 403 Ri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~ 481 (1139)
|++|||||+.+|++|||||||++||+.+++.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++.
T Consensus 164 rv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 243 (260)
T PRK10744 164 RLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARCSDYTAFMYLGELIEFGNTDTIF 243 (260)
T ss_pred HHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999988778899999999999865 9999999999999999999886
Q ss_pred c
Q 048639 482 Q 482 (1139)
Q Consensus 482 ~ 482 (1139)
.
T Consensus 244 ~ 244 (260)
T PRK10744 244 T 244 (260)
T ss_pred h
Confidence 4
No 295
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.9e-41 Score=373.67 Aligned_cols=218 Identities=29% Similarity=0.524 Sum_probs=188.3
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhc
Q 048639 885 RIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQI 964 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i 964 (1139)
.|+++|++++|++. ..++|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 7 ~l~i~~l~~~~~~~-~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 85 (269)
T PRK13648 7 IIVFKNVSFQYQSD-ASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKHI 85 (269)
T ss_pred eEEEEEEEEEcCCC-CCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhe
Confidence 48999999999743 23599999999999999999999999999999999999999999999999999888888899999
Q ss_pred eEEccccc--cccccHHHHhccCCCc--C----CHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHH
Q 048639 965 GLVQQEPL--LFSCSIRNNICYGNEA--A----SEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIA 1036 (1139)
Q Consensus 965 ~~V~Qdp~--LF~gTIreNL~~~~~~--~----sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalA 1036 (1139)
+|+||+|. ++..|+++|+.++... . .++++.++++..++.++.+. ...+||||||||++||
T Consensus 86 ~~v~q~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrl~la 154 (269)
T PRK13648 86 GIVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMHRRVSEALKQVDMLERADY-----------EPNALSGGQKQRVAIA 154 (269)
T ss_pred eEEEeChHHhcccccHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCchhhhC-----------CcccCCHHHHHHHHHH
Confidence 99999984 4566899999765211 1 23456777888887655433 2357999999999999
Q ss_pred HHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhcCCEEEEEeCCEEEEecCh
Q 048639 1037 RTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVINSDVIVVMDKGEVVEMGSH 1116 (1139)
Q Consensus 1037 RALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~~DrI~vl~~G~ive~G~~ 1116 (1139)
||++.+|++|||||||++||+.+.+.+.+.|++... ..++|+|++||+++.+..||||++|++|++++.|++
T Consensus 155 ral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~--------~~~~tiiivtH~~~~~~~~d~i~~l~~G~i~~~g~~ 226 (269)
T PRK13648 155 GVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKS--------EHNITIISITHDLSEAMEADHVIVMNKGTVYKEGTP 226 (269)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH--------hcCCEEEEEecCchHHhcCCEEEEEECCEEEEecCH
Confidence 999999999999999999999999999999987641 224569999999999988999999999999999999
Q ss_pred hHHhhc
Q 048639 1117 STLVAE 1122 (1139)
Q Consensus 1117 ~eLl~~ 1122 (1139)
+++.++
T Consensus 227 ~~~~~~ 232 (269)
T PRK13648 227 TEIFDH 232 (269)
T ss_pred HHHhcC
Confidence 999764
No 296
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-41 Score=371.12 Aligned_cols=224 Identities=34% Similarity=0.496 Sum_probs=188.1
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccc-----CCccEEEECCcccCC--CCh
Q 048639 885 RIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYD-----PNEGIILIDGKGIKE--YNL 957 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~-----p~~G~I~idG~di~~--~~l 957 (1139)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.+||.++.. .+.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~ 80 (251)
T PRK14251 4 IISAKDVHLSYGN---YEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDL 80 (251)
T ss_pred eEEEEeeEEEECC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchH
Confidence 4899999999963 369999999999999999999999999999999999997 479999999999864 345
Q ss_pred HHHhhhceEEccccccccccHHHHhccCCC-------cCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHH
Q 048639 958 RRLRSQIGLVQQEPLLFSCSIRNNICYGNE-------AASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQK 1030 (1139)
Q Consensus 958 ~~lR~~i~~V~Qdp~LF~gTIreNL~~~~~-------~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQr 1030 (1139)
..+|+.++|++|++.+|+.|+++|+.++.. ...++++.++++..+++... ++.++ ....+||||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~---~~~~~----~~~~~LS~Gq~ 153 (251)
T PRK14251 81 VELRKEVGMVFQQPTPFPFSVYDNVAYGLKIAGVKDKELIDQRVEESLKQAAIWKET---KDNLD----RNAQAFSGGQQ 153 (251)
T ss_pred HHhhccEEEEecCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCcch---HHHhc----cChhhCCHHHH
Confidence 567889999999999999999999986421 11234567778887775321 11222 34568999999
Q ss_pred HHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCE
Q 048639 1031 QRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGE 1109 (1139)
Q Consensus 1031 QrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ 1109 (1139)
||++|||||+++|++|||||||++||+++...+.+.|++.. .+ +|+|+|||+++.+.. ||||++|++|+
T Consensus 154 qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~---------~~-~tiiiisH~~~~~~~~~d~i~~l~~G~ 223 (251)
T PRK14251 154 QRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELK---------HQ-YTFIMVTHNLQQAGRISDQTAFLMNGD 223 (251)
T ss_pred HHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHH---------cC-CeEEEEECCHHHHHhhcCEEEEEECCE
Confidence 99999999999999999999999999999999999999764 33 569999999999876 99999999999
Q ss_pred EEEecChhHHhhccCChHH
Q 048639 1110 VVEMGSHSTLVAESQGVYS 1128 (1139)
Q Consensus 1110 ive~G~~~eLl~~~~g~f~ 1128 (1139)
+++.|+++++...+.-.|.
T Consensus 224 i~~~~~~~~~~~~~~~~~~ 242 (251)
T PRK14251 224 LIEAGPTEEMFIAPKKQIT 242 (251)
T ss_pred EEEeCCHHHHHhCCCCHHH
Confidence 9999999999865444444
No 297
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=2.8e-41 Score=364.74 Aligned_cols=207 Identities=29% Similarity=0.490 Sum_probs=174.5
Q ss_pred EEEEeEEEECCCCC-CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHH---Hh
Q 048639 886 IEFQNIKFNYPSRP-EVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRR---LR 961 (1139)
Q Consensus 886 I~~~nvsf~Y~~~~-~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~---lR 961 (1139)
|+++||+++|++.. ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++..++... +|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (221)
T TIGR02211 2 LKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKLR 81 (221)
T ss_pred EEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHHH
Confidence 78999999996421 146999999999999999999999999999999999999999999999999998877654 34
Q ss_pred -hhceEEcccccccc-ccHHHHhccCCC--cC----CHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHH
Q 048639 962 -SQIGLVQQEPLLFS-CSIRNNICYGNE--AA----SEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRI 1033 (1139)
Q Consensus 962 -~~i~~V~Qdp~LF~-gTIreNL~~~~~--~~----sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl 1033 (1139)
++++|+||+|.+|. .|++||+.++.. .. .++++.++++..++.+.... ....||||||||+
T Consensus 82 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv 150 (221)
T TIGR02211 82 NKKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEAKERAYEMLEKVGLEHRINH-----------RPSELSGGERQRV 150 (221)
T ss_pred HhcEEEEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhC-----------ChhhCCHHHHHHH
Confidence 67999999999985 699999976311 11 13356677777777654433 2357999999999
Q ss_pred HHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhcCCEEEEEeCCEEE
Q 048639 1034 AIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVINSDVIVVMDKGEVV 1111 (1139)
Q Consensus 1034 alARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~~DrI~vl~~G~iv 1111 (1139)
+|||||+++|+||||||||++||+++...+.+.|++... ..++|+|+|||+++.+..||+|++|++|+++
T Consensus 151 ~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~--------~~~~tii~~tH~~~~~~~~d~v~~l~~G~i~ 220 (221)
T TIGR02211 151 AIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNR--------ELNTSFLVVTHDLELAKKLDRVLEMKDGQLF 220 (221)
T ss_pred HHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH--------hcCCEEEEEeCCHHHHhhcCEEEEEeCCEec
Confidence 999999999999999999999999999999999987640 2245699999999999889999999999986
No 298
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4e-41 Score=368.51 Aligned_cols=214 Identities=31% Similarity=0.502 Sum_probs=182.2
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccC------CCChHH
Q 048639 886 IEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIK------EYNLRR 959 (1139)
Q Consensus 886 I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~------~~~l~~ 959 (1139)
|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++. ..+...
T Consensus 3 l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (242)
T PRK11124 3 IQLNGINCFYGA---HQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIRE 79 (242)
T ss_pred EEEEeeEEEECC---eeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhHHH
Confidence 789999999963 36999999999999999999999999999999999999999999999999873 123456
Q ss_pred HhhhceEEccccccccc-cHHHHhccCC---CcC----CHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHH
Q 048639 960 LRSQIGLVQQEPLLFSC-SIRNNICYGN---EAA----SEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQ 1031 (1139)
Q Consensus 960 lR~~i~~V~Qdp~LF~g-TIreNL~~~~---~~~----sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQ 1031 (1139)
+|++++|+||+|.+|.+ |+++|+.++. ... ..+++.++++..++.++.... ..+|||||||
T Consensus 80 ~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~-----------~~~LS~G~~q 148 (242)
T PRK11124 80 LRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQALARAEKLLERLRLKPYADRF-----------PLHLSGGQQQ 148 (242)
T ss_pred HHhheEEEecCccccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCC-----------hhhCCHHHHH
Confidence 78899999999999975 9999997421 011 123456667777776554443 3579999999
Q ss_pred HHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEE
Q 048639 1032 RIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEV 1110 (1139)
Q Consensus 1032 rlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~i 1110 (1139)
|++||||++++|+||||||||++||+++...+.+.|++.. ..++|+|++||+++.+.. ||+|++|++|++
T Consensus 149 rv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~---------~~~~tii~~sh~~~~~~~~~d~i~~l~~g~i 219 (242)
T PRK11124 149 RVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELA---------ETGITQVIVTHEVEVARKTASRVVYMENGHI 219 (242)
T ss_pred HHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHH---------HcCCEEEEEeCCHHHHHHhcCEEEEEECCEE
Confidence 9999999999999999999999999999999999999764 334569999999999976 999999999999
Q ss_pred EEecChhHHhhc
Q 048639 1111 VEMGSHSTLVAE 1122 (1139)
Q Consensus 1111 ve~G~~~eLl~~ 1122 (1139)
++.|+++++.+.
T Consensus 220 ~~~~~~~~~~~~ 231 (242)
T PRK11124 220 VEQGDASCFTQP 231 (242)
T ss_pred EEeCCHHHhcCc
Confidence 999999998653
No 299
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.9e-41 Score=372.99 Aligned_cols=221 Identities=31% Similarity=0.510 Sum_probs=183.0
Q ss_pred CccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCC-----CccEEEECCccCCC--C
Q 048639 254 DGNIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDP-----SNGDILIDSLNIKD--L 326 (1139)
Q Consensus 254 ~~~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~-----~~G~i~~~g~~~~~--~ 326 (1139)
.+.|+++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|+++.. .
T Consensus 17 ~~~l~~~nl~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~ 93 (267)
T PRK14235 17 EIKMRARDVSVFYGE---KQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRL 93 (267)
T ss_pred CceEEEEeEEEEECC---EEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECccccc
Confidence 347999999999963 4699999999999999999999999999999999999975 89999999999864 3
Q ss_pred CHHHHhcceEEEecCCCCCcccHHHHHhcCCC--CC--CHHHHHHHHHHhcHHHHHHhC--CCCCCccccccCCCCChHH
Q 048639 327 DLKSLRKNIGAVSQEPSLFTGSLMDNIKVGNM--DA--DDEQIYNASMMANAHSFISQL--PDQYSTELGQRGVQLSGGQ 400 (1139)
Q Consensus 327 ~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~--~~--~~~~~~~~~~~~~~~~~i~~l--~~g~~t~i~~~g~~LSgGq 400 (1139)
+...+|+.++|++|++.+|+.|++||+.++.. .. ...+..+ .+.+.++.+ ++.+....+..+.+|||||
T Consensus 94 ~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq 168 (267)
T PRK14235 94 DVVELRARVGMVFQKPNPFPKSIYENVAYGPRIHGLARSKAELDE-----IVETSLRKAGLWEEVKDRLHEPGTGLSGGQ 168 (267)
T ss_pred chHHHhhceEEEecCCCCCCCcHHHHHHHHHHhcccccchHHHHH-----HHHHHHHHcCCchhhhHHhhCCcccCCHHH
Confidence 45567889999999999998899999987531 10 1111111 112223332 1111224466788999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhh
Q 048639 401 KQRIAIARAIVKNPPILLLDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHS 479 (1139)
Q Consensus 401 kqRi~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~ 479 (1139)
|||++|||||+.+|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|++++
T Consensus 169 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~~~tiiivtH~~~~~~~~~d~v~~l~~G~i~~~g~~~~ 248 (267)
T PRK14235 169 QQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQNYTIVIVTHSMQQAARVSQRTAFFHLGNLVEVGDTEK 248 (267)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhcCCeEEEEEcCHHHHHhhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999988768899999999999865 99999999999999999988
Q ss_pred hhc
Q 048639 480 LLQ 482 (1139)
Q Consensus 480 l~~ 482 (1139)
+..
T Consensus 249 ~~~ 251 (267)
T PRK14235 249 MFT 251 (267)
T ss_pred HHh
Confidence 754
No 300
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=1.6e-41 Score=365.91 Aligned_cols=205 Identities=33% Similarity=0.483 Sum_probs=174.3
Q ss_pred EEEEeEEEECCCCC-CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHH----H
Q 048639 886 IEFQNIKFNYPSRP-EVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRR----L 960 (1139)
Q Consensus 886 I~~~nvsf~Y~~~~-~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~----l 960 (1139)
|+++||+++|++.. ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+... .
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 80 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFR 80 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHH
Confidence 57899999996421 146999999999999999999999999999999999999999999999999998776432 4
Q ss_pred hhhceEEccccccccc-cHHHHhccCCC--cC----CHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHH
Q 048639 961 RSQIGLVQQEPLLFSC-SIRNNICYGNE--AA----SEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRI 1033 (1139)
Q Consensus 961 R~~i~~V~Qdp~LF~g-TIreNL~~~~~--~~----sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl 1033 (1139)
|++++|+||+|.+|.+ |+++|+.++.. .. .++++.++++..++.+.... ...+||||||||+
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv 149 (218)
T cd03255 81 RRHIGFVFQSFNLLPDLTALENVELPLLLAGVPKKERRERAEELLERVGLGDRLNH-----------YPSELSGGQQQRV 149 (218)
T ss_pred hhcEEEEeeccccCCCCcHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhhc-----------ChhhcCHHHHHHH
Confidence 6789999999999976 99999987421 11 23457777888877655433 2357999999999
Q ss_pred HHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccC-CCeEEEEEecCchhhhcCCEEEEEeCCEE
Q 048639 1034 AIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELA-SRTTQITVAHRLATVINSDVIVVMDKGEV 1110 (1139)
Q Consensus 1034 alARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~-~~tTvI~IaHrl~ti~~~DrI~vl~~G~i 1110 (1139)
+|||||+++|+||||||||++||+.+.+.+.+.|++.. + .++|+|+|||+++.+..||+|++|++|++
T Consensus 150 ~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~---------~~~~~tii~~sH~~~~~~~~d~v~~l~~G~i 218 (218)
T cd03255 150 AIARALANDPKIILADEPTGNLDSETGKEVMELLRELN---------KEAGTTIVVVTHDPELAEYADRIIELRDGKI 218 (218)
T ss_pred HHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHH---------HhcCCeEEEEECCHHHHhhhcEEEEeeCCcC
Confidence 99999999999999999999999999999999999764 2 24569999999999888999999999974
No 301
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.6e-41 Score=369.67 Aligned_cols=222 Identities=33% Similarity=0.501 Sum_probs=187.7
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcc---ccC--CccEEEECCcccCCC--Ch
Q 048639 885 RIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRF---YDP--NEGIILIDGKGIKEY--NL 957 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl---~~p--~~G~I~idG~di~~~--~l 957 (1139)
.|+++|++++|++ .++|+|+||+|++||.+||+|+||||||||+++|.|+ ++| ++|+|.+||.++... +.
T Consensus 3 ~l~~~~~~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 79 (250)
T PRK14245 3 KIDARDVNFWYGD---FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQV 79 (250)
T ss_pred EEEEEEEEEEECC---EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccH
Confidence 4899999999963 4699999999999999999999999999999999997 444 589999999998754 34
Q ss_pred HHHhhhceEEccccccccccHHHHhccCCC-------cCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHH
Q 048639 958 RRLRSQIGLVQQEPLLFSCSIRNNICYGNE-------AASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQK 1030 (1139)
Q Consensus 958 ~~lR~~i~~V~Qdp~LF~gTIreNL~~~~~-------~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQr 1030 (1139)
..+|++++|+||+|.+|..|+++|+.++.. ...+++++++++.+++.+++.. .....+..||||||
T Consensus 80 ~~~~~~i~~v~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G~~ 152 (250)
T PRK14245 80 DELRKNVGMVFQRPNPFPKSIFENVAYGLRVNGVKDNAFIRQRVEETLKGAALWDEVKD-------KLKESAFALSGGQQ 152 (250)
T ss_pred HHHhhheEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCcchhh-------hhhCCcccCCHHHH
Confidence 677889999999999999999999976421 1123457778888887654432 22344568999999
Q ss_pred HHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCE
Q 048639 1031 QRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGE 1109 (1139)
Q Consensus 1031 QrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ 1109 (1139)
||++|||||+++|+||||||||++||+.+.+.+.+.|++.. ++ +|||++||+++.+.. ||||++|++|+
T Consensus 153 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~---------~~-~tiiivtH~~~~~~~~~d~v~~l~~G~ 222 (250)
T PRK14245 153 QRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELK---------KD-YTIVIVTHNMQQAARVSDKTAFFYMGE 222 (250)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh---------cC-CeEEEEeCCHHHHHhhCCEEEEEECCE
Confidence 99999999999999999999999999999999999999764 33 459999999999865 99999999999
Q ss_pred EEEecChhHHhhccCCh
Q 048639 1110 VVEMGSHSTLVAESQGV 1126 (1139)
Q Consensus 1110 ive~G~~~eLl~~~~g~ 1126 (1139)
+++.|+++++.+++...
T Consensus 223 ~~~~~~~~~~~~~~~~~ 239 (250)
T PRK14245 223 MVEYDDTKKIFTNPEKE 239 (250)
T ss_pred EEEECCHHHHhcCCCCh
Confidence 99999999998654433
No 302
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.3e-41 Score=370.97 Aligned_cols=223 Identities=30% Similarity=0.443 Sum_probs=187.7
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccc--C---CccEEEECCcccCC--CCh
Q 048639 885 RIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYD--P---NEGIILIDGKGIKE--YNL 957 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~--p---~~G~I~idG~di~~--~~l 957 (1139)
-|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++ | ++|+|.+||.++.. .+.
T Consensus 12 ~l~i~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~ 88 (259)
T PRK14274 12 VYQINGMNLWYGQ---HHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDL 88 (259)
T ss_pred eEEEeeEEEEECC---eeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCH
Confidence 4899999999963 369999999999999999999999999999999999997 3 58999999999864 345
Q ss_pred HHHhhhceEEccccccccccHHHHhccCCC--c-CC----HHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHH
Q 048639 958 RRLRSQIGLVQQEPLLFSCSIRNNICYGNE--A-AS----EAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQK 1030 (1139)
Q Consensus 958 ~~lR~~i~~V~Qdp~LF~gTIreNL~~~~~--~-~s----d~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQr 1030 (1139)
..+|++++|+||+|.+|.+|+++|+.++.. . .+ ++++.++++..++.+++.. .......+||||||
T Consensus 89 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~l~~~~~~LS~Gq~ 161 (259)
T PRK14274 89 VELRKNIGMVFQKGNPFPQSIFDNVAYGPRIHGTKNKKKLQEIVEKSLKDVALWDEVKD-------RLHTQALSLSGGQQ 161 (259)
T ss_pred HHHhhceEEEecCCcccccCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhh-------hhhCCcccCCHHHH
Confidence 678899999999999999999999976421 1 12 2345667777777654321 22334567999999
Q ss_pred HHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCE
Q 048639 1031 QRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGE 1109 (1139)
Q Consensus 1031 QrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ 1109 (1139)
||++|||||+++|+||||||||++||+.+...+.+.|++.. . ++|+|+|||+++.+.. ||||++|++|+
T Consensus 162 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~---------~-~~tiiivtH~~~~~~~~~d~i~~l~~G~ 231 (259)
T PRK14274 162 QRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLK---------E-KYTIVIVTHNMQQAARVSDQTAFFYMGE 231 (259)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHh---------c-CCEEEEEEcCHHHHHHhCCEEEEEECCE
Confidence 99999999999999999999999999999999999999764 3 3469999999999876 99999999999
Q ss_pred EEEecChhHHhhccCChH
Q 048639 1110 VVEMGSHSTLVAESQGVY 1127 (1139)
Q Consensus 1110 ive~G~~~eLl~~~~g~f 1127 (1139)
+++.|+++++.+++...|
T Consensus 232 i~~~g~~~~~~~~~~~~~ 249 (259)
T PRK14274 232 LVECNDTNKMFSNPDDQR 249 (259)
T ss_pred EEEECCHHHHhhCCCCHH
Confidence 999999999986644443
No 303
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=2.4e-41 Score=360.48 Aligned_cols=199 Identities=34% Similarity=0.557 Sum_probs=168.3
Q ss_pred EEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcceEE
Q 048639 258 DIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNIGA 337 (1139)
Q Consensus 258 ~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 337 (1139)
+++|++++|++. +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. ...+++++|
T Consensus 1 ~~~~l~~~~~~~--~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~---~~~~~~i~~ 75 (205)
T cd03226 1 RIENISFSYKKG--TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKA---KERRKSIGY 75 (205)
T ss_pred CcccEEEEeCCc--CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhh---HHhhcceEE
Confidence 367999999641 469999999999999999999999999999999999999999999999998753 356778999
Q ss_pred EecCC--CCCcccHHHHHhcCCCCCC--HHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHccC
Q 048639 338 VSQEP--SLFTGSLMDNIKVGNMDAD--DEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVKN 413 (1139)
Q Consensus 338 v~Q~~--~l~~~ti~~ni~~g~~~~~--~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~~ 413 (1139)
++|+| .+++.|++||+.++.+... .+++. +.++.+ |+.........+||||||||++|||||+.+
T Consensus 76 ~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~---------~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral~~~ 144 (205)
T cd03226 76 VMQDVDYQLFTDSVREELLLGLKELDAGNEQAE---------TVLKDL--DLYALKERHPLSLSGGQKQRLAIAAALLSG 144 (205)
T ss_pred EecChhhhhhhccHHHHHhhhhhhcCccHHHHH---------HHHHHc--CCchhcCCCchhCCHHHHHHHHHHHHHHhC
Confidence 99998 4677899999988643221 12222 334444 344445566779999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHhHHHHHHHHHHH-cCCCeEEEEecCccchhc-cCEEEEEeCcEEE
Q 048639 414 PPILLLDEATSALDSESEKLVQEALERA-MQGRTVILIAHRMSTIVN-ADMIAVVEDGQVT 472 (1139)
Q Consensus 414 ~~illlDEpts~LD~~~~~~i~~~l~~~-~~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~ 472 (1139)
|+++||||||++||+.+.+.+.+.|+++ .+++|+|++||+++.+.. ||++++|++|+++
T Consensus 145 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 145 KDLLIFDEPTSGLDYKNMERVGELIRELAAQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred CCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 9999999999999999999999999887 458999999999999875 9999999999974
No 304
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.1e-41 Score=361.52 Aligned_cols=207 Identities=26% Similarity=0.470 Sum_probs=172.6
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcceE
Q 048639 257 IDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNIG 336 (1139)
Q Consensus 257 i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 336 (1139)
|+++|++|+|++ +++|+|+||++++| +++|+||||||||||+++|+|+++|++|+|.++|.++...+ ..+++.++
T Consensus 1 i~~~~~~~~~~~---~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~ 75 (211)
T cd03264 1 LQLENLTKRYGK---KRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQP-QKLRRRIG 75 (211)
T ss_pred CEEEEEEEEECC---EEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccch-HHHHhheE
Confidence 478999999963 36999999999999 99999999999999999999999999999999999987765 66788999
Q ss_pred EEecCCCCCcc-cHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHccC
Q 048639 337 AVSQEPSLFTG-SLMDNIKVGNM--DADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVKN 413 (1139)
Q Consensus 337 ~v~Q~~~l~~~-ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~~ 413 (1139)
|++|++.+|.. |++||+.+... ....++..+ .+.+.++.+ |++......+.+||||||||++|||||+++
T Consensus 76 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~al~~~ 148 (211)
T cd03264 76 YLPQEFGVYPNFTVREFLDYIAWLKGIPSKEVKA-----RVDEVLELV--NLGDRAKKKIGSLSGGMRRRVGIAQALVGD 148 (211)
T ss_pred EecCCCcccccCCHHHHHHHHHHHhCCCHHHHHH-----HHHHHHHHC--CCHHHHhCchhhCCHHHHHHHHHHHHHhcC
Confidence 99999999876 99999986421 111111111 112233333 222233456678999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhc-cCEEEEEeCcEEEEec
Q 048639 414 PPILLLDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETG 475 (1139)
Q Consensus 414 ~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g 475 (1139)
|+++||||||++||+.+.+.+.+.++++.+++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 149 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 149 PSILIVDEPTAGLDPEERIRFRNLLSELGEDRIVILSTHIVEDVESLCNQVAVLNKGKLVFEG 211 (211)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEecC
Confidence 9999999999999999999999999988767999999999999875 9999999999998764
No 305
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.6e-41 Score=375.68 Aligned_cols=218 Identities=30% Similarity=0.516 Sum_probs=183.2
Q ss_pred EEEEeEEEECCCCC--CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCC----ChHH
Q 048639 886 IEFQNIKFNYPSRP--EVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEY----NLRR 959 (1139)
Q Consensus 886 I~~~nvsf~Y~~~~--~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~----~l~~ 959 (1139)
|+++||+++|+++. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +...
T Consensus 3 l~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (280)
T PRK13649 3 INLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDIKQ 82 (280)
T ss_pred EEEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCHHH
Confidence 78999999997421 13699999999999999999999999999999999999999999999999998764 3567
Q ss_pred HhhhceEEcccc--ccccccHHHHhccCCC--cCCHH----HHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHH
Q 048639 960 LRSQIGLVQQEP--LLFSCSIRNNICYGNE--AASEA----EIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQ 1031 (1139)
Q Consensus 960 lR~~i~~V~Qdp--~LF~gTIreNL~~~~~--~~sd~----ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQ 1031 (1139)
+|++++|+||+| .+|+.|+++|+.++.. ..+.+ .+.++++..++.+. ........|||||||
T Consensus 83 ~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~----------~~~~~~~~LSgG~~q 152 (280)
T PRK13649 83 IRKKVGLVFQFPESQLFEETVLKDVAFGPQNFGVSQEEAEALAREKLALVGISES----------LFEKNPFELSGGQMR 152 (280)
T ss_pred HHhheEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChh----------hhhCCcccCCHHHHH
Confidence 888999999998 6888999999986421 12222 34556666666421 112334579999999
Q ss_pred HHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEE
Q 048639 1032 RIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEV 1110 (1139)
Q Consensus 1032 rlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~i 1110 (1139)
|++|||||+++|++|||||||++||+++.+.+.+.|++.. +.++|||++||+++.+.. ||+|++|++|++
T Consensus 153 rv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~---------~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i 223 (280)
T PRK13649 153 RVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLH---------QSGMTIVLVTHLMDDVANYADFVYVLEKGKL 223 (280)
T ss_pred HHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHH---------HCCCEEEEEeccHHHHHHhCCEEEEEECCEE
Confidence 9999999999999999999999999999999999999764 334569999999999875 999999999999
Q ss_pred EEecChhHHhhc
Q 048639 1111 VEMGSHSTLVAE 1122 (1139)
Q Consensus 1111 ve~G~~~eLl~~ 1122 (1139)
++.|+++++++.
T Consensus 224 ~~~g~~~~~~~~ 235 (280)
T PRK13649 224 VLSGKPKDIFQD 235 (280)
T ss_pred EEeCCHHHHhcC
Confidence 999999998754
No 306
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=5.4e-41 Score=379.86 Aligned_cols=222 Identities=23% Similarity=0.393 Sum_probs=185.6
Q ss_pred ccEEEEeEEEECCCCC----------CCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCC
Q 048639 255 GNIDIRDVCFAYPSRP----------DQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIK 324 (1139)
Q Consensus 255 ~~i~~~~v~~~y~~~~----------~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~ 324 (1139)
..|+++|++++|+.+. ...+++|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.
T Consensus 7 ~~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i~ 86 (331)
T PRK15079 7 VLLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKDLL 86 (331)
T ss_pred ceEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEECC
Confidence 3589999999996321 246999999999999999999999999999999999999999999999999998
Q ss_pred CCCHH---HHhcceEEEecCC--CCCc-ccHHHHHhcCC----CCCCHHHHHHHHHHhcHHHHHHhCCCCCC-ccccccC
Q 048639 325 DLDLK---SLRKNIGAVSQEP--SLFT-GSLMDNIKVGN----MDADDEQIYNASMMANAHSFISQLPDQYS-TELGQRG 393 (1139)
Q Consensus 325 ~~~~~---~~~~~i~~v~Q~~--~l~~-~ti~~ni~~g~----~~~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~i~~~g 393 (1139)
+.+.+ .+|++|+||+|+| .+++ .||.|||.++. +..+.++..+. +.+.++.+ |++ ......+
T Consensus 87 ~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~~~~~~~~~~~-----~~~~l~~v--gl~~~~~~~~p 159 (331)
T PRK15079 87 GMKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQEVKDR-----VKAMMLKV--GLLPNLINRYP 159 (331)
T ss_pred cCCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhccCCCHHHHHHH-----HHHHHHHc--CCChHHhcCCc
Confidence 87654 3577899999998 4774 69999997531 11233332222 22344444 332 2456778
Q ss_pred CCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CCeEEEEecCccchhc-cCEEEEEeCcE
Q 048639 394 VQLSGGQKQRIAIARAIVKNPPILLLDEATSALDSESEKLVQEALERAMQ--GRTVILIAHRMSTIVN-ADMIAVVEDGQ 470 (1139)
Q Consensus 394 ~~LSgGqkqRi~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~itH~~~~~~~-~d~i~~l~~G~ 470 (1139)
.+||||||||++|||||+.+|++||+||||++||+.++..+.+.|+++.+ +.|+|+|||+++.+.. ||+|++|++|+
T Consensus 160 ~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~~~~~~~dri~vl~~G~ 239 (331)
T PRK15079 160 HEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYLGH 239 (331)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 89999999999999999999999999999999999999999999988753 7899999999999976 99999999999
Q ss_pred EEEecChhhhhcc
Q 048639 471 VTETGTHHSLLQT 483 (1139)
Q Consensus 471 i~~~g~~~~l~~~ 483 (1139)
|++.|+.+++..+
T Consensus 240 ive~g~~~~i~~~ 252 (331)
T PRK15079 240 AVELGTYDEVYHN 252 (331)
T ss_pred EEEEcCHHHHHcC
Confidence 9999999999764
No 307
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.6e-41 Score=375.87 Aligned_cols=221 Identities=30% Similarity=0.521 Sum_probs=185.0
Q ss_pred cEEEEeEEEECCCCC--CCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCC----CHH
Q 048639 256 NIDIRDVCFAYPSRP--DQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDL----DLK 329 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~--~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~----~~~ 329 (1139)
.|+++|++++|++.. .+++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++... +..
T Consensus 2 ~i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13641 2 SIKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLK 81 (287)
T ss_pred EEEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 378999999997321 14699999999999999999999999999999999999999999999999988643 245
Q ss_pred HHhcceEEEecCC--CCCcccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhCCCCCC-ccccccCCCCChHHHHHH
Q 048639 330 SLRKNIGAVSQEP--SLFTGSLMDNIKVGNM--DADDEQIYNASMMANAHSFISQLPDQYS-TELGQRGVQLSGGQKQRI 404 (1139)
Q Consensus 330 ~~~~~i~~v~Q~~--~l~~~ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~i~~~g~~LSgGqkqRi 404 (1139)
..++.|+|++|+| .+|..|++|||.++.. ....++..+ .+.+.++.+ |++ ........+||||||||+
T Consensus 82 ~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--gL~~~~~~~~~~~LSgGq~qrl 154 (287)
T PRK13641 82 KLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNFGFSEDEAKE-----KALKWLKKV--GLSEDLISKSPFELSGGQMRRV 154 (287)
T ss_pred HHHhceEEEEeChhhhhccchHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CCChhHhhCCcccCCHHHHHHH
Confidence 6678899999998 5777899999987532 122222211 123445555 554 345677889999999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhc
Q 048639 405 AIARAIVKNPPILLLDEATSALDSESEKLVQEALERAM-QGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQ 482 (1139)
Q Consensus 405 ~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 482 (1139)
+|||||+.+|++|||||||++||+.+...+.+.|+++. +|.|+|++||+++.+.. ||++++|++|++++.|+++++.+
T Consensus 155 ~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 234 (287)
T PRK13641 155 AIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGKLIKHASPKEIFS 234 (287)
T ss_pred HHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999999999998875 48999999999999865 99999999999999999998865
Q ss_pred c
Q 048639 483 T 483 (1139)
Q Consensus 483 ~ 483 (1139)
.
T Consensus 235 ~ 235 (287)
T PRK13641 235 D 235 (287)
T ss_pred C
Confidence 4
No 308
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5e-41 Score=370.27 Aligned_cols=221 Identities=33% Similarity=0.472 Sum_probs=186.5
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccc--C---CccEEEECCcccCCC--Ch
Q 048639 885 RIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYD--P---NEGIILIDGKGIKEY--NL 957 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~--p---~~G~I~idG~di~~~--~l 957 (1139)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++ | ++|+|.+||.++... +.
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~ 81 (252)
T PRK14239 5 ILQVSDLSVYYNK---KKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDT 81 (252)
T ss_pred eEEEEeeEEEECC---eeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccch
Confidence 4899999999963 369999999999999999999999999999999999954 6 489999999998643 34
Q ss_pred HHHhhhceEEccccccccccHHHHhccCC---C----cCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHH
Q 048639 958 RRLRSQIGLVQQEPLLFSCSIRNNICYGN---E----AASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQK 1030 (1139)
Q Consensus 958 ~~lR~~i~~V~Qdp~LF~gTIreNL~~~~---~----~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQr 1030 (1139)
..+|++++||||+|.+|+.|+++|+.++. + ...++++.++++.+++.+.+.. .......+||||||
T Consensus 82 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G~~ 154 (252)
T PRK14239 82 VDLRKEIGMVFQQPNPFPMSIYENVVYGLRLKGIKDKQVLDEAVEKSLKGASIWDEVKD-------RLHDSALGLSGGQQ 154 (252)
T ss_pred HhhhhcEEEEecCCccCcCcHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCchhHHH-------HHhcCcccCCHHHH
Confidence 56788999999999999999999998541 1 1123456677888887554322 23344568999999
Q ss_pred HHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCE
Q 048639 1031 QRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGE 1109 (1139)
Q Consensus 1031 QrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ 1109 (1139)
||++|||||+++|++|||||||++||+.+...+.+.|++.. .+ +|+|++||+++.+.. ||||++|++|+
T Consensus 155 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~---------~~-~tii~~sH~~~~~~~~~d~i~~l~~G~ 224 (252)
T PRK14239 155 QRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLK---------DD-YTMLLVTRSMQQASRISDRTGFFLDGD 224 (252)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHh---------hC-CeEEEEECCHHHHHHhCCEEEEEECCE
Confidence 99999999999999999999999999999999999999764 33 469999999998865 99999999999
Q ss_pred EEEecChhHHhhccCC
Q 048639 1110 VVEMGSHSTLVAESQG 1125 (1139)
Q Consensus 1110 ive~G~~~eLl~~~~g 1125 (1139)
+++.|+++++.+++..
T Consensus 225 i~~~g~~~~~~~~~~~ 240 (252)
T PRK14239 225 LIEYNDTKQMFMNPKH 240 (252)
T ss_pred EEEeCCHHHHHhCCCC
Confidence 9999999999876443
No 309
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=5.3e-41 Score=371.78 Aligned_cols=227 Identities=32% Similarity=0.452 Sum_probs=186.6
Q ss_pred EEEEeEEEECCCC------CCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHH
Q 048639 886 IEFQNIKFNYPSR------PEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRR 959 (1139)
Q Consensus 886 I~~~nvsf~Y~~~------~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~ 959 (1139)
|+++||+++|+.. .+.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++...
T Consensus 3 l~~~~l~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~ 82 (265)
T TIGR02769 3 LEVRDVTHTYRTGGLFGAKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRKQ 82 (265)
T ss_pred EEEEeEEEEeccCccccccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEccccCHHH
Confidence 7899999999631 1346999999999999999999999999999999999999999999999999998776543
Q ss_pred ---HhhhceEEccccc--cc-cccHHHHhccCC-------CcCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCC
Q 048639 960 ---LRSQIGLVQQEPL--LF-SCSIRNNICYGN-------EAASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLS 1026 (1139)
Q Consensus 960 ---lR~~i~~V~Qdp~--LF-~gTIreNL~~~~-------~~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LS 1026 (1139)
+|++++|+||+|. ++ ..|+++|+.+.. +...++++.++++..++.+.. ....+..||
T Consensus 83 ~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~----------~~~~~~~LS 152 (265)
T TIGR02769 83 RRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLTSLDESEQKARIAELLDMVGLRSED----------ADKLPRQLS 152 (265)
T ss_pred HHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhh----------hhCChhhCC
Confidence 6788999999983 44 479999986421 112234567777777774211 123345799
Q ss_pred hHHHHHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEE
Q 048639 1027 GGQKQRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVM 1105 (1139)
Q Consensus 1027 gGQrQrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl 1105 (1139)
||||||++|||||+.+|+||||||||++||+++...+.+.|+++.. ..++|+|+|||+++.+.. ||+|++|
T Consensus 153 gGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~--------~~g~tiiivsH~~~~~~~~~d~i~~l 224 (265)
T TIGR02769 153 GGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQ--------AFGTAYLFITHDLRLVQSFCQRVAVM 224 (265)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH--------hcCcEEEEEeCCHHHHHHHhcEEEEE
Confidence 9999999999999999999999999999999999999999997641 124569999999999975 9999999
Q ss_pred eCCEEEEecChhHHhhccCChHHHH
Q 048639 1106 DKGEVVEMGSHSTLVAESQGVYSRL 1130 (1139)
Q Consensus 1106 ~~G~ive~G~~~eLl~~~~g~f~~l 1130 (1139)
++|++++.|++++++...+..+..+
T Consensus 225 ~~G~i~~~g~~~~~~~~~~~~~~~~ 249 (265)
T TIGR02769 225 DKGQIVEECDVAQLLSFKHPAGRNL 249 (265)
T ss_pred eCCEEEEECCHHHHcCCCCHHHHHH
Confidence 9999999999999987533344434
No 310
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=3.4e-41 Score=384.43 Aligned_cols=210 Identities=27% Similarity=0.426 Sum_probs=179.5
Q ss_pred cccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCc----ccCCCChHHHh----hhceEEccccc
Q 048639 901 VTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGK----GIKEYNLRRLR----SQIGLVQQEPL 972 (1139)
Q Consensus 901 ~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~----di~~~~l~~lR----~~i~~V~Qdp~ 972 (1139)
..+|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|++||. ++...+...+| ++++||+|++.
T Consensus 37 ~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~~~ 116 (382)
T TIGR03415 37 VVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVFQKFA 116 (382)
T ss_pred EEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEECCCc
Confidence 45899999999999999999999999999999999999999999999995 67777665543 57999999999
Q ss_pred ccc-ccHHHHhccCCC--cC----CHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhcCCCCE
Q 048639 973 LFS-CSIRNNICYGNE--AA----SEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIARTLLKRPAI 1045 (1139)
Q Consensus 973 LF~-gTIreNL~~~~~--~~----sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalARALlr~p~I 1045 (1139)
+|+ .|+++|+.++.. .. ..+++.++++.++|.++.+..| .+||||||||++|||||+++|+|
T Consensus 117 l~p~~Tv~eNi~~~~~~~g~~~~~~~~~a~e~le~vgL~~~~~~~~-----------~~LSgGq~QRV~LARALa~~P~I 185 (382)
T TIGR03415 117 LMPWLTVEENVAFGLEMQGMPEAERRKRVDEQLELVGLAQWADKKP-----------GELSGGMQQRVGLARAFAMDADI 185 (382)
T ss_pred CCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcCCh-----------hhCCHHHHHHHHHHHHHhcCCCE
Confidence 997 799999987521 11 1345778899999877654433 46999999999999999999999
Q ss_pred EEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEEEecChhHHhhccC
Q 048639 1046 MLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVVEMGSHSTLVAESQ 1124 (1139)
Q Consensus 1046 LlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eLl~~~~ 1124 (1139)
||||||||+||+.+...+++.|.+... ..++|+|+|||+++.+.. ||||++|++|++++.|++++++.++.
T Consensus 186 LLlDEPts~LD~~~r~~l~~~L~~l~~--------~~~~TII~iTHdl~e~~~l~DrI~vl~~G~iv~~g~~~ei~~~p~ 257 (382)
T TIGR03415 186 LLMDEPFSALDPLIRTQLQDELLELQA--------KLNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQHGTPEEIVLNPA 257 (382)
T ss_pred EEEECCCccCCHHHHHHHHHHHHHHHH--------hcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhhCcc
Confidence 999999999999999999999987641 224569999999999865 99999999999999999999997655
Q ss_pred ChHHH
Q 048639 1125 GVYSR 1129 (1139)
Q Consensus 1125 g~f~~ 1129 (1139)
..|.+
T Consensus 258 ~~~~~ 262 (382)
T TIGR03415 258 NDYVA 262 (382)
T ss_pred hHHHH
Confidence 55543
No 311
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.4e-41 Score=366.91 Aligned_cols=214 Identities=27% Similarity=0.440 Sum_probs=180.0
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHH-Hhhh
Q 048639 885 RIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRR-LRSQ 963 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~-lR~~ 963 (1139)
.|+++||+++|++ .++|+++||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... +|++
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 81 (237)
T PRK11614 5 MLSFDKVSAHYGK---IQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMREA 81 (237)
T ss_pred EEEEEeEEEeeCC---ceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHHHHhC
Confidence 4899999999963 36999999999999999999999999999999999999999999999999998887654 6788
Q ss_pred ceEEccccccccc-cHHHHhccCCCcCCH----HHHHHHHHHc-CchHHHhhCCCCccccccCCCCCCChHHHHHHHHHH
Q 048639 964 IGLVQQEPLLFSC-SIRNNICYGNEAASE----AEIVEVSKKA-NIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIAR 1037 (1139)
Q Consensus 964 i~~V~Qdp~LF~g-TIreNL~~~~~~~sd----~ei~~al~~~-~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalAR 1037 (1139)
++|+||++.+|.+ |+++|+.++....+. +++.++++.. ++.+. .......||||||||++|||
T Consensus 82 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~l~~~~~l~~~-----------~~~~~~~LS~G~~qrl~la~ 150 (237)
T PRK11614 82 VAIVPEGRRVFSRMTVEENLAMGGFFAERDQFQERIKWVYELFPRLHER-----------RIQRAGTMSGGEQQMLAIGR 150 (237)
T ss_pred EEEeccCcccCCCCcHHHHHHHhhhccChhHHHHHHHHHHHHHHHHHHH-----------HhCchhhCCHHHHHHHHHHH
Confidence 9999999999985 999999874321122 2233334333 22221 12234579999999999999
Q ss_pred HhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEEEecCh
Q 048639 1038 TLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVVEMGSH 1116 (1139)
Q Consensus 1038 ALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~ 1116 (1139)
||+++|+||||||||++||+++.+.+.+.|++.. ++++|+|++||+++.+.. ||||++|++|++++.|++
T Consensus 151 al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~---------~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~ 221 (237)
T PRK11614 151 ALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLR---------EQGMTIFLVEQNANQALKLADRGYVLENGHVVLEDTG 221 (237)
T ss_pred HHHhCCCEEEEcCccccCCHHHHHHHHHHHHHHH---------HCCCEEEEEeCcHHHHHhhCCEEEEEeCCEEEeeCCH
Confidence 9999999999999999999999999999998764 334569999999998765 999999999999999999
Q ss_pred hHHhh
Q 048639 1117 STLVA 1121 (1139)
Q Consensus 1117 ~eLl~ 1121 (1139)
+++.+
T Consensus 222 ~~~~~ 226 (237)
T PRK11614 222 DALLA 226 (237)
T ss_pred HHHhc
Confidence 99974
No 312
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=2.4e-41 Score=363.11 Aligned_cols=205 Identities=31% Similarity=0.572 Sum_probs=176.0
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhce
Q 048639 886 IEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQIG 965 (1139)
Q Consensus 886 I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~ 965 (1139)
|+++|++++|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.+||.++...+.. +++++
T Consensus 1 i~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~--~~~i~ 75 (213)
T cd03301 1 VELENVTKRFGN---VTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPK--DRDIA 75 (213)
T ss_pred CEEEeeEEEECC---eeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcc--cceEE
Confidence 578999999964 3699999999999999999999999999999999999999999999999998765543 56899
Q ss_pred EEcccccccc-ccHHHHhccCCC------cCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 048639 966 LVQQEPLLFS-CSIRNNICYGNE------AASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIART 1038 (1139)
Q Consensus 966 ~V~Qdp~LF~-gTIreNL~~~~~------~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalARA 1038 (1139)
|+||++.+|. .|+++|+.++.. ...++++.++++..++.++....| ..||||||||++||||
T Consensus 76 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qr~~lara 144 (213)
T cd03301 76 MVFQNYALYPHMTVYDNIAFGLKLRKVPKDEIDERVREVAELLQIEHLLDRKP-----------KQLSGGQRQRVALGRA 144 (213)
T ss_pred EEecChhhccCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHHHHhCCh-----------hhCCHHHHHHHHHHHH
Confidence 9999999885 699999986421 112345677788888876654433 4799999999999999
Q ss_pred hcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEEEec
Q 048639 1039 LLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVVEMG 1114 (1139)
Q Consensus 1039 Llr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ive~G 1114 (1139)
|+++|++|||||||++||+.+.+.+.+.|++... ..++|+|+|||+++.+.. ||+|++|++|+++++|
T Consensus 145 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--------~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 145 IVREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQ--------RLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH--------HcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 9999999999999999999999999999987640 124569999999999876 9999999999999986
No 313
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.6e-41 Score=386.51 Aligned_cols=217 Identities=28% Similarity=0.504 Sum_probs=185.0
Q ss_pred ccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcc
Q 048639 255 GNIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKN 334 (1139)
Q Consensus 255 ~~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~ 334 (1139)
..|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+.+|++|+|.++|+++.+.++ .++.
T Consensus 18 ~~l~l~~v~~~~~~---~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~ 92 (377)
T PRK11607 18 PLLEIRNLTKSFDG---QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPP--YQRP 92 (377)
T ss_pred ceEEEEeEEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCH--HHCC
Confidence 35999999999963 459999999999999999999999999999999999999999999999999877654 4678
Q ss_pred eEEEecCCCCCcc-cHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHc
Q 048639 335 IGAVSQEPSLFTG-SLMDNIKVGNM--DADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIV 411 (1139)
Q Consensus 335 i~~v~Q~~~l~~~-ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~ 411 (1139)
||||+|++.+|+. |++|||.|+.. .....+..+ .+.+.++.+ |+.......+.+|||||||||+|||||+
T Consensus 93 ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~-----~v~~~l~~l--~L~~~~~~~~~~LSgGq~QRVaLARAL~ 165 (377)
T PRK11607 93 INMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIAS-----RVNEMLGLV--HMQEFAKRKPHQLSGGQRQRVALARSLA 165 (377)
T ss_pred EEEEeCCCccCCCCCHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHHHh
Confidence 9999999999975 99999998742 112222211 122344444 4445566778899999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhcc
Q 048639 412 KNPPILLLDEATSALDSESEKLVQEALERAM--QGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQT 483 (1139)
Q Consensus 412 ~~~~illlDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 483 (1139)
.+|++||||||||+||+.++..+.+.++++. .+.|+|+|||+++.+.. ||+|++|++|++++.|+++++..+
T Consensus 166 ~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~~~~~ 240 (377)
T PRK11607 166 KRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYEH 240 (377)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHHHHHhC
Confidence 9999999999999999999999998887754 37899999999998765 999999999999999999998764
No 314
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.2e-41 Score=362.77 Aligned_cols=213 Identities=24% Similarity=0.438 Sum_probs=177.3
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcceE
Q 048639 257 IDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNIG 336 (1139)
Q Consensus 257 i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 336 (1139)
|+++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++... ...++++++
T Consensus 1 i~~~~~~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~ 76 (220)
T cd03265 1 IEVENLVKKYGD---FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVRE-PREVRRRIG 76 (220)
T ss_pred CEEEEEEEEECC---EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcC-hHHHhhcEE
Confidence 478999999963 4699999999999999999999999999999999999999999999999987653 355678899
Q ss_pred EEecCCCCCcc-cHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHccC
Q 048639 337 AVSQEPSLFTG-SLMDNIKVGNM--DADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVKN 413 (1139)
Q Consensus 337 ~v~Q~~~l~~~-ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~~ 413 (1139)
|++|++.+++. |++||+.++.. ....++.. ..+.+.++.+ |++........+||||||||++||||++.+
T Consensus 77 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qr~~la~al~~~ 149 (220)
T cd03265 77 IVFQDLSVDDELTGWENLYIHARLYGVPGAERR-----ERIDELLDFV--GLLEAADRLVKTYSGGMRRRLEIARSLVHR 149 (220)
T ss_pred EecCCccccccCcHHHHHHHHHHHcCCCHHHHH-----HHHHHHHHHc--CCHHHhhCChhhCCHHHHHHHHHHHHHhcC
Confidence 99999998875 99999987421 11111111 1122344444 344444556779999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHhHHHHHHHHHHHc-C-CCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhh
Q 048639 414 PPILLLDEATSALDSESEKLVQEALERAM-Q-GRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSL 480 (1139)
Q Consensus 414 ~~illlDEpts~LD~~~~~~i~~~l~~~~-~-~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l 480 (1139)
|+++||||||++||+.+.+.+.+.|.++. + ++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 150 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (220)
T cd03265 150 PEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPEEL 219 (220)
T ss_pred CCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChHHc
Confidence 99999999999999999999999998864 3 7899999999999876 999999999999999987764
No 315
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=2.9e-41 Score=361.89 Aligned_cols=202 Identities=36% Similarity=0.635 Sum_probs=174.1
Q ss_pred EEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhceE
Q 048639 887 EFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQIGL 966 (1139)
Q Consensus 887 ~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~~ 966 (1139)
+++|++++|+++ ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+...+|++++|
T Consensus 1 ~~~~l~~~~~~~-~~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 79 (211)
T cd03225 1 ELKNLSFSYPDG-ARPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPTSGEVLVDGKDLTKLSLKELRRKVGL 79 (211)
T ss_pred CceeEEEecCCC-CeeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccCCHHHHHhhceE
Confidence 368999999642 2469999999999999999999999999999999999999999999999999988888888999999
Q ss_pred Ecccc--ccccccHHHHhccCCC--cCC----HHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 048639 967 VQQEP--LLFSCSIRNNICYGNE--AAS----EAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIART 1038 (1139)
Q Consensus 967 V~Qdp--~LF~gTIreNL~~~~~--~~s----d~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalARA 1038 (1139)
+||+| .++..|+++|+.++.. ..+ ++++.++++..++.++..+. ...||||||||++||||
T Consensus 80 ~~q~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LSgG~~qrv~lara 148 (211)
T cd03225 80 VFQNPDDQFFGPTVEEEVAFGLENLGLPEEEIEERVEEALELVGLEGLRDRS-----------PFTLSGGQKQRVAIAGV 148 (211)
T ss_pred EecChhhhcCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCcHhhhcCC-----------cccCCHHHHHHHHHHHH
Confidence 99998 3678899999986421 111 34566778888876654433 35799999999999999
Q ss_pred hcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCE
Q 048639 1039 LLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGE 1109 (1139)
Q Consensus 1039 Llr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ 1109 (1139)
|+++|++|||||||++||+++.+.+.+.|++.. .+++|+|++||+++.+.. ||+|++|++|+
T Consensus 149 l~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~---------~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~ 211 (211)
T cd03225 149 LAMDPDILLLDEPTAGLDPAGRRELLELLKKLK---------AEGKTIIIVTHDLDLLLELADRVIVLEDGK 211 (211)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHH---------HcCCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 999999999999999999999999999998764 234569999999999987 99999999985
No 316
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=3e-41 Score=362.58 Aligned_cols=202 Identities=34% Similarity=0.549 Sum_probs=175.9
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChH---HHhh
Q 048639 886 IEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLR---RLRS 962 (1139)
Q Consensus 886 I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~---~lR~ 962 (1139)
|+++|++++|++ +.++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++..++.. .+|+
T Consensus 2 l~~~~l~~~~~~--~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (214)
T TIGR02673 2 IEFHNVSKAYPG--GVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPLLRR 79 (214)
T ss_pred EEEEeeeEEeCC--CceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHHh
Confidence 789999999952 24699999999999999999999999999999999999999999999999999877643 4678
Q ss_pred hceEEcccccccc-ccHHHHhccCC------CcCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHH
Q 048639 963 QIGLVQQEPLLFS-CSIRNNICYGN------EAASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAI 1035 (1139)
Q Consensus 963 ~i~~V~Qdp~LF~-gTIreNL~~~~------~~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlal 1035 (1139)
+++|+||+|.+|. .|+++|+.++. +...+++++++++..++.++..+.| .+||||||||++|
T Consensus 80 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrl~l 148 (214)
T TIGR02673 80 RIGVVFQDFRLLPDRTVYENVALPLEVRGKKEREIQRRVGAALRQVGLEHKADAFP-----------EQLSGGEQQRVAI 148 (214)
T ss_pred heEEEecChhhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCCh-----------hhCCHHHHHHHHH
Confidence 9999999999985 69999998641 1123457888999999877655443 4799999999999
Q ss_pred HHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCE
Q 048639 1036 ARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGE 1109 (1139)
Q Consensus 1036 ARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ 1109 (1139)
||||+++|++|||||||++||+.+...+.+.|++.. +.++|+|+|||+++.+.. ||+|++|++|+
T Consensus 149 a~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~---------~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 149 ARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLN---------KRGTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred HHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHH---------HcCCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 999999999999999999999999999999999764 234569999999999987 99999999985
No 317
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.6e-41 Score=373.58 Aligned_cols=214 Identities=26% Similarity=0.431 Sum_probs=183.0
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccC--CCChHHHhhh
Q 048639 886 IEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIK--EYNLRRLRSQ 963 (1139)
Q Consensus 886 I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~--~~~l~~lR~~ 963 (1139)
|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. ..+...+|++
T Consensus 2 l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~ 78 (271)
T PRK13638 2 LATSDLWFRYQD---EPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLALRQQ 78 (271)
T ss_pred eEEEEEEEEcCC---cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHHHHhh
Confidence 789999999963 35999999999999999999999999999999999999999999999999985 3345678889
Q ss_pred ceEEccccc--cccccHHHHhccCCC--cCC----HHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHH
Q 048639 964 IGLVQQEPL--LFSCSIRNNICYGNE--AAS----EAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAI 1035 (1139)
Q Consensus 964 i~~V~Qdp~--LF~gTIreNL~~~~~--~~s----d~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlal 1035 (1139)
++||||+|. +|..|+.+|+.++.. ..+ .+++.++++..++.++..+ ...+||||||||++|
T Consensus 79 i~~v~q~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LSgG~~qrl~l 147 (271)
T PRK13638 79 VATVFQDPEQQIFYTDIDSDIAFSLRNLGVPEAEITRRVDEALTLVDAQHFRHQ-----------PIQCLSHGQKKRVAI 147 (271)
T ss_pred eEEEeeChhhccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHhHhcC-----------CchhCCHHHHHHHHH
Confidence 999999985 577899999976311 112 2346677888888665322 235799999999999
Q ss_pred HHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEEEec
Q 048639 1036 ARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVVEMG 1114 (1139)
Q Consensus 1036 ARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ive~G 1114 (1139)
||||+.+|+||||||||++||+.+...+.+.|++.. ..++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 148 araL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~---------~~g~tii~vtH~~~~~~~~~d~i~~l~~G~i~~~g 218 (271)
T PRK13638 148 AGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIV---------AQGNHVIISSHDIDLIYEISDAVYVLRQGQILTHG 218 (271)
T ss_pred HHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHH---------HCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeC
Confidence 999999999999999999999999999999999764 234569999999999965 9999999999999999
Q ss_pred ChhHHhhc
Q 048639 1115 SHSTLVAE 1122 (1139)
Q Consensus 1115 ~~~eLl~~ 1122 (1139)
+++++...
T Consensus 219 ~~~~~~~~ 226 (271)
T PRK13638 219 APGEVFAC 226 (271)
T ss_pred CHHHHhcC
Confidence 99998754
No 318
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.5e-41 Score=368.18 Aligned_cols=224 Identities=33% Similarity=0.524 Sum_probs=189.2
Q ss_pred ccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccC-----CccEEEECCcccCC--CC
Q 048639 884 GRIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDP-----NEGIILIDGKGIKE--YN 956 (1139)
Q Consensus 884 g~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~~--~~ 956 (1139)
|.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+
T Consensus 2 ~~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~ 78 (250)
T PRK14240 2 GKISVKDLDLFYGD---FQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDID 78 (250)
T ss_pred CeEEEEEEEEEECC---ceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccc
Confidence 46999999999963 3699999999999999999999999999999999999863 68999999999875 35
Q ss_pred hHHHhhhceEEccccccccccHHHHhccCCC--c-----CCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHH
Q 048639 957 LRRLRSQIGLVQQEPLLFSCSIRNNICYGNE--A-----ASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQ 1029 (1139)
Q Consensus 957 l~~lR~~i~~V~Qdp~LF~gTIreNL~~~~~--~-----~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQ 1029 (1139)
...+|++++|+||+|.+|+.|+++|+.++.. . ..++++.++++.+++.+.+.. ........|||||
T Consensus 79 ~~~~~~~i~~~~q~~~~~~~t~~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LS~G~ 151 (250)
T PRK14240 79 VNQLRKRVGMVFQQPNPFPMSIYDNVAYGPRTHGIKDKKKLDEIVEKSLKGAALWDEVKD-------RLKKSALGLSGGQ 151 (250)
T ss_pred hHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhHH-------HHhcCCCCCCHHH
Confidence 5678899999999999999999999986421 1 123456777788877544321 2233456799999
Q ss_pred HHHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCC
Q 048639 1030 KQRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKG 1108 (1139)
Q Consensus 1030 rQrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G 1108 (1139)
|||++|||||+.+|++|||||||++||+.+...+.+.|++.. . ++|+|++||+++.+.. ||||++|++|
T Consensus 152 ~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~---------~-~~tiii~sH~~~~~~~~~d~v~~l~~G 221 (250)
T PRK14240 152 QQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELK---------K-DYTIVIVTHNMQQASRISDKTAFFLNG 221 (250)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh---------c-CCeEEEEEeCHHHHHhhCCEEEEEECC
Confidence 999999999999999999999999999999999999998764 3 3469999999998876 9999999999
Q ss_pred EEEEecChhHHhhccCChH
Q 048639 1109 EVVEMGSHSTLVAESQGVY 1127 (1139)
Q Consensus 1109 ~ive~G~~~eLl~~~~g~f 1127 (1139)
++++.|+++++..++...+
T Consensus 222 ~i~~~~~~~~~~~~~~~~~ 240 (250)
T PRK14240 222 EIVEFGDTVDLFTNPKDKR 240 (250)
T ss_pred EEEEeCCHHHHHhCCCChH
Confidence 9999999999986544443
No 319
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.8e-41 Score=370.65 Aligned_cols=220 Identities=30% Similarity=0.551 Sum_probs=186.5
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcce
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNI 335 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 335 (1139)
.++++|++++|++. ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.+
T Consensus 7 ~l~~~nl~~~~~~~-~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~i 85 (271)
T PRK13632 7 MIKVENVSFSYPNS-ENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRKKI 85 (271)
T ss_pred EEEEEeEEEEcCCC-CccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhcce
Confidence 58999999999632 35699999999999999999999999999999999999999999999999999877777788899
Q ss_pred EEEecCCC--CCcccHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHc
Q 048639 336 GAVSQEPS--LFTGSLMDNIKVGNMD--ADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIV 411 (1139)
Q Consensus 336 ~~v~Q~~~--l~~~ti~~ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~ 411 (1139)
+|++|+|. ++..|++||+.++... .+.++... .+.+.++.+ |++......+.+||||||||++|||||+
T Consensus 86 ~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~laral~ 158 (271)
T PRK13632 86 GIIFQNPDNQFIGATVEDDIAFGLENKKVPPKKMKD-----IIDDLAKKV--GMEDYLDKEPQNLSGGQKQRVAIASVLA 158 (271)
T ss_pred EEEEeCHHHhcCcccHHHHHHhHHHHcCCCHHHHHH-----HHHHHHHHc--CCHHHhhCCcccCCHHHHHHHHHHHHHH
Confidence 99999983 4567999999875321 12222211 123344444 4444566777899999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CCeEEEEecCccchhccCEEEEEeCcEEEEecChhhhhcc
Q 048639 412 KNPPILLLDEATSALDSESEKLVQEALERAMQ--GRTVILIAHRMSTIVNADMIAVVEDGQVTETGTHHSLLQT 483 (1139)
Q Consensus 412 ~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 483 (1139)
.+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+..||++++|++|++++.|+.+++.+.
T Consensus 159 ~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 232 (271)
T PRK13632 159 LNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDEAILADKVIVFSEGKLIAQGKPKEILNN 232 (271)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhHHhhCCEEEEEECCEEEEecCHHHHhcC
Confidence 99999999999999999999999999988753 4899999999998878999999999999999999887654
No 320
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=4.3e-41 Score=379.15 Aligned_cols=214 Identities=30% Similarity=0.457 Sum_probs=182.5
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhc
Q 048639 885 RIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQI 964 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i 964 (1139)
.|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++... ...+|+++
T Consensus 4 ~i~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-~~~~~~~i 79 (303)
T TIGR01288 4 AIDLVGVSKSYGD---KVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSR-ARLARVAI 79 (303)
T ss_pred EEEEEeEEEEeCC---eEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccc-HHHHhhcE
Confidence 4899999999963 3699999999999999999999999999999999999999999999999998754 35678999
Q ss_pred eEEcccccccc-ccHHHHhccCCC--cCCH----HHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHH
Q 048639 965 GLVQQEPLLFS-CSIRNNICYGNE--AASE----AEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIAR 1037 (1139)
Q Consensus 965 ~~V~Qdp~LF~-gTIreNL~~~~~--~~sd----~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalAR 1037 (1139)
+|+||++.+|. .|+++|+.+... ..+. +++.++++.+++.+. +++.+ ..||||||||++|||
T Consensus 80 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~-------~~~~~----~~LSgG~~qrv~la~ 148 (303)
T TIGR01288 80 GVVPQFDNLDPEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLESK-------ADVRV----ALLSGGMKRRLTLAR 148 (303)
T ss_pred EEEeccccCCcCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhH-------hcCch----hhCCHHHHHHHHHHH
Confidence 99999998885 699999974211 1222 234556666666443 33333 469999999999999
Q ss_pred HhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEEEecCh
Q 048639 1038 TLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVVEMGSH 1116 (1139)
Q Consensus 1038 ALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~ 1116 (1139)
||+.+|++|||||||++||+.+...+.+.|++.. ..++|||++||+++.+.. ||+|++|++|++++.|++
T Consensus 149 al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~---------~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~ 219 (303)
T TIGR01288 149 ALINDPQLLILDEPTTGLDPHARHLIWERLRSLL---------ARGKTILLTTHFMEEAERLCDRLCVLESGRKIAEGRP 219 (303)
T ss_pred HHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHH---------hCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCH
Confidence 9999999999999999999999999999999864 334569999999999976 999999999999999999
Q ss_pred hHHhhc
Q 048639 1117 STLVAE 1122 (1139)
Q Consensus 1117 ~eLl~~ 1122 (1139)
+++.+.
T Consensus 220 ~~~~~~ 225 (303)
T TIGR01288 220 HALIDE 225 (303)
T ss_pred HHHHhh
Confidence 999754
No 321
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=4.5e-41 Score=372.95 Aligned_cols=218 Identities=26% Similarity=0.448 Sum_probs=183.6
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHH---HHh
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLK---SLR 332 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~---~~~ 332 (1139)
.|+++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.. .++
T Consensus 7 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~ 83 (269)
T PRK11831 7 LVDMRGVSFTRGN---RCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVR 83 (269)
T ss_pred eEEEeCeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHHHh
Confidence 5899999999963 4699999999999999999999999999999999999999999999999998766543 356
Q ss_pred cceEEEecCCCCCcc-cHHHHHhcCCCC---CCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHH
Q 048639 333 KNIGAVSQEPSLFTG-SLMDNIKVGNMD---ADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIAR 408 (1139)
Q Consensus 333 ~~i~~v~Q~~~l~~~-ti~~ni~~g~~~---~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lAR 408 (1139)
++++|++|++.+|+. |++||+.++... ...++. ...+.+.++.+ |+.........+||||||||++|||
T Consensus 84 ~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~-----~~~~~~~l~~~--gl~~~~~~~~~~LSgGq~qrv~lar 156 (269)
T PRK11831 84 KRMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLL-----HSTVMMKLEAV--GLRGAAKLMPSELSGGMARRAALAR 156 (269)
T ss_pred hcEEEEecccccCCCCCHHHHHHHHHHHccCCCHHHH-----HHHHHHHHHHc--CChhhhhCChhhCCHHHHHHHHHHH
Confidence 789999999999986 999999874211 111111 11122334444 4444456677899999999999999
Q ss_pred HHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhcc
Q 048639 409 AIVKNPPILLLDEATSALDSESEKLVQEALERAMQ--GRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQT 483 (1139)
Q Consensus 409 al~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 483 (1139)
||+.+|+++||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+.. ||++++|++|++++.|+++++.+.
T Consensus 157 al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 234 (269)
T PRK11831 157 AIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIVAHGSAQALQAN 234 (269)
T ss_pred HHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEEEeCCHHHHhcC
Confidence 99999999999999999999999999999988743 7899999999999876 999999999999999999998764
No 322
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=9.9e-41 Score=365.54 Aligned_cols=222 Identities=21% Similarity=0.393 Sum_probs=187.3
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHH-Hhcc
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKS-LRKN 334 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~-~~~~ 334 (1139)
.|+++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... .+..
T Consensus 2 ~i~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 78 (242)
T TIGR03411 2 ILYLEGLSVSFDG---FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARAG 78 (242)
T ss_pred eEEEEeeEEEcCC---eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhcC
Confidence 3789999999963 46999999999999999999999999999999999999999999999999987766554 3567
Q ss_pred eEEEecCCCCCcc-cHHHHHhcCCCCCC--HHH---HHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHH
Q 048639 335 IGAVSQEPSLFTG-SLMDNIKVGNMDAD--DEQ---IYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIAR 408 (1139)
Q Consensus 335 i~~v~Q~~~l~~~-ti~~ni~~g~~~~~--~~~---~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lAR 408 (1139)
++|++|++.+|++ |++||+.++..... ... .........+.+.++.+ |++........+||||||||++|||
T Consensus 79 i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~Ge~qrv~lar 156 (242)
T TIGR03411 79 IGRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETI--GLADEADRLAGLLSHGQKQWLEIGM 156 (242)
T ss_pred eeEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHH
Confidence 9999999999986 99999988632100 000 00011122234556665 5556667788899999999999999
Q ss_pred HHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhc
Q 048639 409 AIVKNPPILLLDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQ 482 (1139)
Q Consensus 409 al~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 482 (1139)
|++.+|++|||||||++||+.++..+.+.++++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 157 al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~ 231 (242)
T TIGR03411 157 LLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAGKHSVVVVEHDMEFVRSIADKVTVLHQGSVLAEGSLDQVQA 231 (242)
T ss_pred HHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEeeCCHHHHhc
Confidence 999999999999999999999999999999988778999999999999976 99999999999999999998864
No 323
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6e-41 Score=365.90 Aligned_cols=218 Identities=27% Similarity=0.426 Sum_probs=181.8
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHH-Hhcc
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKS-LRKN 334 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~-~~~~ 334 (1139)
.++++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... .++.
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 81 (237)
T PRK11614 5 MLSFDKVSAHYGK---IQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMREA 81 (237)
T ss_pred EEEEEeEEEeeCC---ceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHHHHhC
Confidence 4899999999963 46999999999999999999999999999999999999999999999999988776543 5778
Q ss_pred eEEEecCCCCCcc-cHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHccC
Q 048639 335 IGAVSQEPSLFTG-SLMDNIKVGNMDADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVKN 413 (1139)
Q Consensus 335 i~~v~Q~~~l~~~-ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~~ 413 (1139)
++|++|++.+|+. |++||+.++......++..+.+ .+.++.++. +.......+.+||||||||++||||++.+
T Consensus 82 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~l~~~~~-l~~~~~~~~~~LS~G~~qrl~la~al~~~ 155 (237)
T PRK11614 82 VAIVPEGRRVFSRMTVEENLAMGGFFAERDQFQERI-----KWVYELFPR-LHERRIQRAGTMSGGEQQMLAIGRALMSQ 155 (237)
T ss_pred EEEeccCcccCCCCcHHHHHHHhhhccChhHHHHHH-----HHHHHHHHH-HHHHHhCchhhCCHHHHHHHHHHHHHHhC
Confidence 9999999999975 9999998864322222222111 122222211 12223456779999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhc
Q 048639 414 PPILLLDEATSALDSESEKLVQEALERAM-QGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQ 482 (1139)
Q Consensus 414 ~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 482 (1139)
|+|+||||||++||+.+...+.+.++++. +++|+|++||+++.+.. ||++++|++|++++.|+++++..
T Consensus 156 p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 226 (237)
T PRK11614 156 PRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLEDTGDALLA 226 (237)
T ss_pred CCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHhhCCEEEEEeCCEEEeeCCHHHHhc
Confidence 99999999999999999999999998865 48999999999998765 99999999999999999999864
No 324
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=3.1e-41 Score=362.62 Aligned_cols=203 Identities=31% Similarity=0.529 Sum_probs=175.1
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCCh---HHHhh
Q 048639 886 IEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNL---RRLRS 962 (1139)
Q Consensus 886 I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l---~~lR~ 962 (1139)
|+++|++++|+++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. ..+|+
T Consensus 1 l~~~~l~~~~~~~--~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 78 (214)
T cd03292 1 IEFINVTKTYPNG--TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPYLRR 78 (214)
T ss_pred CEEEEEEEEeCCC--ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHHH
Confidence 4789999999642 359999999999999999999999999999999999999999999999999987654 34788
Q ss_pred hceEEcccccccc-ccHHHHhccCCC--cC----CHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHH
Q 048639 963 QIGLVQQEPLLFS-CSIRNNICYGNE--AA----SEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAI 1035 (1139)
Q Consensus 963 ~i~~V~Qdp~LF~-gTIreNL~~~~~--~~----sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlal 1035 (1139)
+++||||+|.+|. .|+++|+.++.. .. .++++.++++..++.+..++.| .+||||||||++|
T Consensus 79 ~i~~v~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~l 147 (214)
T cd03292 79 KIGVVFQDFRLLPDRNVYENVAFALEVTGVPPREIRKRVPAALELVGLSHKHRALP-----------AELSGGEQQRVAI 147 (214)
T ss_pred heEEEecCchhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCCh-----------hhcCHHHHHHHHH
Confidence 9999999999987 599999986421 11 2346778888888876554433 4799999999999
Q ss_pred HHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEE
Q 048639 1036 ARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEV 1110 (1139)
Q Consensus 1036 ARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~i 1110 (1139)
||||+++|+||||||||++||+++.+.+.+.|++.. ++++|+|++||+++.+.+ ||+|++|++|++
T Consensus 148 aral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~---------~~~~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 148 ARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKIN---------KAGTTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred HHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHH---------HcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999999999999764 234569999999999986 999999999974
No 325
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-40 Score=371.26 Aligned_cols=220 Identities=29% Similarity=0.522 Sum_probs=184.9
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcce
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNI 335 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 335 (1139)
.++++|++++|+++ .++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|+++...+...+++.+
T Consensus 3 ~l~~~~l~~~~~~~--~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i 80 (277)
T PRK13652 3 LIETRDLCYSYSGS--KEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKFV 80 (277)
T ss_pred eEEEEEEEEEeCCC--CceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhe
Confidence 37899999999632 3599999999999999999999999999999999999999999999999998877777788899
Q ss_pred EEEecCCC--CCcccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHc
Q 048639 336 GAVSQEPS--LFTGSLMDNIKVGNM--DADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIV 411 (1139)
Q Consensus 336 ~~v~Q~~~--l~~~ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~ 411 (1139)
+||+|+|. +++.|++||+.++.. ..+.++..+ .+.+.++.+ |+.......+..||||||||++|||||+
T Consensus 81 ~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~Gq~qrl~laraL~ 153 (277)
T PRK13652 81 GLVFQNPDDQIFSPTVEQDIAFGPINLGLDEETVAH-----RVSSALHML--GLEELRDRVPHHLSGGEKKRVAIAGVIA 153 (277)
T ss_pred EEEecCcccccccccHHHHHHhHHHHcCCCHHHHHH-----HHHHHHHHC--CChhHhcCCcccCCHHHHHHHHHHHHHH
Confidence 99999983 677899999987532 122222111 122334443 3333455667799999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhccc
Q 048639 412 KNPPILLLDEATSALDSESEKLVQEALERAMQ--GRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQTS 484 (1139)
Q Consensus 412 ~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~ 484 (1139)
.+|++|||||||++||+.+.+.+.+.++++.+ ++|+|++||+++.+.. ||++++|++|++++.|+++++.+..
T Consensus 154 ~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~i~~~g~~~~~~~~~ 229 (277)
T PRK13652 154 MEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGRIVAYGTVEEIFLQP 229 (277)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEEECCHHHHhcCH
Confidence 99999999999999999999999999988753 7999999999999864 9999999999999999999987643
No 326
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.7e-41 Score=371.27 Aligned_cols=221 Identities=33% Similarity=0.498 Sum_probs=189.4
Q ss_pred cccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccC-----CccEEEECCcccCC--C
Q 048639 883 KGRIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDP-----NEGIILIDGKGIKE--Y 955 (1139)
Q Consensus 883 ~g~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~~--~ 955 (1139)
.+.|+++||+++|++ .++|+|+||+|++||.+||+|+||||||||+++|.|+++| ++|+|.+||.++.. .
T Consensus 23 ~~~l~~~nl~~~~~~---~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~ 99 (272)
T PRK14236 23 QTALEVRNLNLFYGD---KQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKV 99 (272)
T ss_pred CcEEEEEEEEEEECC---eeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECccccc
Confidence 346999999999963 3699999999999999999999999999999999999884 79999999999875 3
Q ss_pred ChHHHhhhceEEccccccccccHHHHhccCCC--c-----CCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChH
Q 048639 956 NLRRLRSQIGLVQQEPLLFSCSIRNNICYGNE--A-----ASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGG 1028 (1139)
Q Consensus 956 ~l~~lR~~i~~V~Qdp~LF~gTIreNL~~~~~--~-----~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgG 1028 (1139)
+...+|++++|+||++.+|++|+++|+.++.. . ..++++.++++.+++.+.+.. ..+..+..||||
T Consensus 100 ~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G 172 (272)
T PRK14236 100 DVAELRRRVGMVFQRPNPFPKSIYENVVYGLRLQGINNRRVLDEAVERSLRGAALWDEVKD-------RLHENAFGLSGG 172 (272)
T ss_pred CHHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCChhHHH-------HhhCCcccCCHH
Confidence 45678899999999999999999999976421 1 113457778888888654432 234456789999
Q ss_pred HHHHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeC
Q 048639 1029 QKQRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDK 1107 (1139)
Q Consensus 1029 QrQrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~ 1107 (1139)
||||++|||||+++|+||||||||++||+.+...+.+.|++.. ++ .|+|++||+++.+.. ||||++|++
T Consensus 173 q~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~---------~~-~tiiivtH~~~~~~~~~d~i~~l~~ 242 (272)
T PRK14236 173 QQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELK---------SK-YTIVIVTHNMQQAARVSDYTAFMYM 242 (272)
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHH---------hC-CeEEEEeCCHHHHHhhCCEEEEEEC
Confidence 9999999999999999999999999999999999999999764 33 469999999999875 999999999
Q ss_pred CEEEEecChhHHhhcc
Q 048639 1108 GEVVEMGSHSTLVAES 1123 (1139)
Q Consensus 1108 G~ive~G~~~eLl~~~ 1123 (1139)
|++++.|+++++.+++
T Consensus 243 G~i~~~g~~~~~~~~~ 258 (272)
T PRK14236 243 GKLVEYGDTDTLFTSP 258 (272)
T ss_pred CEEEecCCHHHHhcCC
Confidence 9999999999998653
No 327
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.7e-41 Score=368.35 Aligned_cols=225 Identities=28% Similarity=0.473 Sum_probs=189.1
Q ss_pred cccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccc--C---CccEEEECCcccCCC--
Q 048639 883 KGRIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYD--P---NEGIILIDGKGIKEY-- 955 (1139)
Q Consensus 883 ~g~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~--p---~~G~I~idG~di~~~-- 955 (1139)
.|.|+++|++++|++ .++|+|+||+|++||.+||+|+||||||||+++|.|+++ | ++|+|.+||.++...
T Consensus 2 ~~~l~~~nl~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~ 78 (252)
T PRK14256 2 NNKVKLEQLNVHFGK---NHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGV 78 (252)
T ss_pred CcEEEEEEEEEEeCC---eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccC
Confidence 357999999999963 369999999999999999999999999999999999986 4 589999999998653
Q ss_pred ChHHHhhhceEEcccccccc-ccHHHHhccCCC--c-C----CHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCCh
Q 048639 956 NLRRLRSQIGLVQQEPLLFS-CSIRNNICYGNE--A-A----SEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSG 1027 (1139)
Q Consensus 956 ~l~~lR~~i~~V~Qdp~LF~-gTIreNL~~~~~--~-~----sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSg 1027 (1139)
+...+|++++|+||++.+|. .|+++|+.++.. . . .++++.++++..++.+++... ....+.+|||
T Consensus 79 ~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-------~~~~~~~LS~ 151 (252)
T PRK14256 79 DPVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNGRVNRSEADEIVESSLKRVALWDEVKDR-------LKSNAMELSG 151 (252)
T ss_pred ChHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhHH-------hhCCcCcCCH
Confidence 44567899999999999987 699999976311 1 1 124567778888876544321 2234568999
Q ss_pred HHHHHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEe
Q 048639 1028 GQKQRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMD 1106 (1139)
Q Consensus 1028 GQrQrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~ 1106 (1139)
|||||++|||||+++|++|||||||++||+.+...+.+.|++.. .+ +|+|++||+++.+.. ||||++|+
T Consensus 152 G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~---------~~-~tiiivsH~~~~~~~~~d~i~~l~ 221 (252)
T PRK14256 152 GQQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELK---------EK-YTIIIVTHNMQQAARVSDYTAFFY 221 (252)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHH---------hC-CcEEEEECCHHHHHhhCCEEEEEE
Confidence 99999999999999999999999999999999999999999874 33 569999999999865 99999999
Q ss_pred CCEEEEecChhHHhhccCChH
Q 048639 1107 KGEVVEMGSHSTLVAESQGVY 1127 (1139)
Q Consensus 1107 ~G~ive~G~~~eLl~~~~g~f 1127 (1139)
+|++++.|+++++...+...|
T Consensus 222 ~G~i~~~~~~~~~~~~~~~~~ 242 (252)
T PRK14256 222 MGDLVECGETKKIFTTPEKKQ 242 (252)
T ss_pred CCEEEEeCCHHHHHhCCCcHH
Confidence 999999999999986644433
No 328
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=4.7e-41 Score=380.66 Aligned_cols=229 Identities=25% Similarity=0.425 Sum_probs=188.3
Q ss_pred cEEEEeEEEECCCCC-CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCC---ccEEEECCcccCCCChHHH
Q 048639 885 RIEFQNIKFNYPSRP-EVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPN---EGIILIDGKGIKEYNLRRL 960 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~-~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~---~G~I~idG~di~~~~l~~l 960 (1139)
-++++|++++|+.+. ..++|+||||+|++||++||+|+||||||||+++|+|+++|. +|+|.+||.|+..++.+.+
T Consensus 12 ~L~i~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~ 91 (330)
T PRK09473 12 LLDVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKEL 91 (330)
T ss_pred eEEEeCeEEEEecCCCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHH
Confidence 489999999996431 246999999999999999999999999999999999999996 9999999999999887765
Q ss_pred h----hhceEEcccc--cccc-ccHHHHhc----cCCCcCCH----HHHHHHHHHcCchHHHhhCCCCccccccCCCCCC
Q 048639 961 R----SQIGLVQQEP--LLFS-CSIRNNIC----YGNEAASE----AEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQL 1025 (1139)
Q Consensus 961 R----~~i~~V~Qdp--~LF~-gTIreNL~----~~~~~~sd----~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~L 1025 (1139)
| ++|+||||+| .++. -|+.+|+. ... ..+. +++.++++.+++.+ +. ..++....+|
T Consensus 92 ~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~-~~~~~~~~~~~~~~L~~vgL~~-------~~-~~~~~~p~~L 162 (330)
T PRK09473 92 NKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHK-GMSKAEAFEESVRMLDAVKMPE-------AR-KRMKMYPHEF 162 (330)
T ss_pred HHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHcCCCC-------hH-HHhcCCcccC
Confidence 4 4799999999 4543 46777663 221 1222 34566677776632 22 1234556789
Q ss_pred ChHHHHHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEE
Q 048639 1026 SGGQKQRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVV 1104 (1139)
Q Consensus 1026 SgGQrQrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~v 1104 (1139)
|||||||++|||||+.+|++||+||||++||..+...|.+.|+++.. ..++|+|+|||+++.+.. ||||+|
T Consensus 163 SgG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~--------~~g~til~iTHdl~~~~~~~Dri~v 234 (330)
T PRK09473 163 SGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKR--------EFNTAIIMITHDLGVVAGICDKVLV 234 (330)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHH--------HcCCEEEEEECCHHHHHHhCCEEEE
Confidence 99999999999999999999999999999999999999999987641 224569999999999975 999999
Q ss_pred EeCCEEEEecChhHHhhccCChHHHH
Q 048639 1105 MDKGEVVEMGSHSTLVAESQGVYSRL 1130 (1139)
Q Consensus 1105 l~~G~ive~G~~~eLl~~~~g~f~~l 1130 (1139)
|++|+|+|.|+++++++++...|.+.
T Consensus 235 m~~G~ive~g~~~~i~~~p~~pyt~~ 260 (330)
T PRK09473 235 MYAGRTMEYGNARDVFYQPSHPYSIG 260 (330)
T ss_pred EECCEEEEECCHHHHHhCCCCHHHHH
Confidence 99999999999999998776667663
No 329
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6e-41 Score=368.95 Aligned_cols=227 Identities=33% Similarity=0.535 Sum_probs=190.7
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccC-----CccEEEECCcccCCC--Ch
Q 048639 885 RIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDP-----NEGIILIDGKGIKEY--NL 957 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~~~--~l 957 (1139)
.|+++||+++|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.+||.++... +.
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~ 79 (250)
T PRK14262 3 IIEIENFSAYYGE---KKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDV 79 (250)
T ss_pred eEEEEeeEEEeCC---ceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhH
Confidence 4899999999963 3699999999999999999999999999999999999984 899999999998753 34
Q ss_pred HHHhhhceEEccccccccccHHHHhccCCC---c----CCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHH
Q 048639 958 RRLRSQIGLVQQEPLLFSCSIRNNICYGNE---A----ASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQK 1030 (1139)
Q Consensus 958 ~~lR~~i~~V~Qdp~LF~gTIreNL~~~~~---~----~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQr 1030 (1139)
..+|++++|+||+|.+|..|+++|+.++.. . ..++++.++++.+++.+.+.. .......+||||||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~Gq~ 152 (250)
T PRK14262 80 TEYRKKVGMVFQKPTPFPMSIYDNVAFGPRIHGVKSKHKLDRIVEESLKKAALWDEVKS-------ELNKPGTRLSGGQQ 152 (250)
T ss_pred HHhhhhEEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCchhHH-------HHhCChhhcCHHHH
Confidence 567889999999999999999999986421 1 123456777888887654322 23345568999999
Q ss_pred HHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCE
Q 048639 1031 QRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGE 1109 (1139)
Q Consensus 1031 QrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ 1109 (1139)
||++|||||+++|+||||||||++||+.+...+.+.|++.. .+ +|+|++||+++.+.. ||+|++|++|+
T Consensus 153 qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~---------~~-~tili~sH~~~~~~~~~d~i~~l~~G~ 222 (250)
T PRK14262 153 QRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELS---------EN-YTIVIVTHNIGQAIRIADYIAFMYRGE 222 (250)
T ss_pred HHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHh---------cC-cEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 99999999999999999999999999999999999999764 33 569999999998765 99999999999
Q ss_pred EEEecChhHHhhccCChHHHHH
Q 048639 1110 VVEMGSHSTLVAESQGVYSRLY 1131 (1139)
Q Consensus 1110 ive~G~~~eLl~~~~g~f~~l~ 1131 (1139)
+++.|+++++.+++...|.+.+
T Consensus 223 i~~~g~~~~~~~~~~~~~~~~~ 244 (250)
T PRK14262 223 LIEYGPTREIVERPKNKLTEEY 244 (250)
T ss_pred EEEecCHHHHHhCCCChHHHHH
Confidence 9999999999865444455433
No 330
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.1e-41 Score=365.08 Aligned_cols=207 Identities=33% Similarity=0.507 Sum_probs=176.7
Q ss_pred EEEEeEEEECCCCC-CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhc
Q 048639 886 IEFQNIKFNYPSRP-EVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQI 964 (1139)
Q Consensus 886 I~~~nvsf~Y~~~~-~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i 964 (1139)
|+++|++++|++.. ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++.. +++++
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-----~~~~i 75 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTG-----PGPDR 75 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcc-----ccCcE
Confidence 57899999996411 1469999999999999999999999999999999999999999999999998863 46789
Q ss_pred eEEcccccccc-ccHHHHhccCCC------cCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHH
Q 048639 965 GLVQQEPLLFS-CSIRNNICYGNE------AASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIAR 1037 (1139)
Q Consensus 965 ~~V~Qdp~LF~-gTIreNL~~~~~------~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalAR 1037 (1139)
+||||+|.+|. .|+++|+.++.. ...++++.++++..++.++..+.| .+||||||||++|||
T Consensus 76 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LSgG~~qrl~la~ 144 (220)
T cd03293 76 GYVFQQDALLPWLTVLDNVALGLELQGVPKAEARERAEELLELVGLSGFENAYP-----------HQLSGGMRQRVALAR 144 (220)
T ss_pred EEEecccccccCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCCc-----------ccCCHHHHHHHHHHH
Confidence 99999999987 699999976421 112456788888888876655443 479999999999999
Q ss_pred HhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEe--CCEEEEec
Q 048639 1038 TLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMD--KGEVVEMG 1114 (1139)
Q Consensus 1038 ALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~--~G~ive~G 1114 (1139)
||+++|++|||||||++||+.+.+.+.+.|++... ..++|+|+|||+++.+.. ||+|++|+ +|++++.+
T Consensus 145 al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~--------~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~ 216 (220)
T cd03293 145 ALAVDPDVLLLDEPFSALDALTREQLQEELLDIWR--------ETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEV 216 (220)
T ss_pred HHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHH--------HcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEE
Confidence 99999999999999999999999999999987530 224569999999998865 99999999 79999987
Q ss_pred Ch
Q 048639 1115 SH 1116 (1139)
Q Consensus 1115 ~~ 1116 (1139)
+.
T Consensus 217 ~~ 218 (220)
T cd03293 217 EV 218 (220)
T ss_pred Ee
Confidence 64
No 331
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=6.2e-41 Score=367.16 Aligned_cols=212 Identities=25% Similarity=0.447 Sum_probs=183.4
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHH-hhhc
Q 048639 886 IEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRL-RSQI 964 (1139)
Q Consensus 886 I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~l-R~~i 964 (1139)
|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.... |+++
T Consensus 3 i~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i 79 (242)
T TIGR03411 3 LYLEGLSVSFDG---FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARAGI 79 (242)
T ss_pred EEEEeeEEEcCC---eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhcCe
Confidence 789999999963 369999999999999999999999999999999999999999999999999988776654 5679
Q ss_pred eEEccccccccc-cHHHHhccCCCc--------------CCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHH
Q 048639 965 GLVQQEPLLFSC-SIRNNICYGNEA--------------ASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQ 1029 (1139)
Q Consensus 965 ~~V~Qdp~LF~g-TIreNL~~~~~~--------------~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQ 1029 (1139)
+|+||++.+|.+ |+++|+.++... ..++++.++++..++.+.. ......|||||
T Consensus 80 ~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~Ge 148 (242)
T TIGR03411 80 GRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIGLADEA-----------DRLAGLLSHGQ 148 (242)
T ss_pred eEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcCCchhh-----------cCChhhCCHHH
Confidence 999999999986 999999874210 1234566677776664432 23345799999
Q ss_pred HHHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCC
Q 048639 1030 KQRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKG 1108 (1139)
Q Consensus 1030 rQrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G 1108 (1139)
|||++||||++++|++|||||||++||+++.+.+.+.|++.. .+ .|+|++||+++.+.. ||+|++|++|
T Consensus 149 ~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~---------~~-~tii~~sH~~~~~~~~~d~i~~l~~g 218 (242)
T TIGR03411 149 KQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLA---------GK-HSVVVVEHDMEFVRSIADKVTVLHQG 218 (242)
T ss_pred HHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHh---------cC-CEEEEEECCHHHHHHhCCEEEEEECC
Confidence 999999999999999999999999999999999999999864 33 469999999999976 9999999999
Q ss_pred EEEEecChhHHhh
Q 048639 1109 EVVEMGSHSTLVA 1121 (1139)
Q Consensus 1109 ~ive~G~~~eLl~ 1121 (1139)
++++.|+++++..
T Consensus 219 ~~~~~~~~~~~~~ 231 (242)
T TIGR03411 219 SVLAEGSLDQVQA 231 (242)
T ss_pred eEEeeCCHHHHhc
Confidence 9999999999874
No 332
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=4.4e-41 Score=367.68 Aligned_cols=216 Identities=29% Similarity=0.541 Sum_probs=184.3
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCC--CHHHHhcc
Q 048639 257 IDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDL--DLKSLRKN 334 (1139)
Q Consensus 257 i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~--~~~~~~~~ 334 (1139)
++++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++... +...++++
T Consensus 2 l~~~~l~~~~~~---~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 78 (240)
T PRK09493 2 IEFKNVSKHFGP---TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQE 78 (240)
T ss_pred EEEEeEEEEECC---eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhhc
Confidence 789999999963 4699999999999999999999999999999999999999999999999998764 33566789
Q ss_pred eEEEecCCCCCc-ccHHHHHhcCCC---CCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHH
Q 048639 335 IGAVSQEPSLFT-GSLMDNIKVGNM---DADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAI 410 (1139)
Q Consensus 335 i~~v~Q~~~l~~-~ti~~ni~~g~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal 410 (1139)
++|++|++.++. .|++||+.++.. .....+.. ..+.+.++.+ |++......+..||||||||++||||+
T Consensus 79 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~la~al 151 (240)
T PRK09493 79 AGMVFQQFYLFPHLTALENVMFGPLRVRGASKEEAE-----KQARELLAKV--GLAERAHHYPSELSGGQQQRVAIARAL 151 (240)
T ss_pred eEEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHH-----HHHHHHHHHc--CChHHHhcChhhcCHHHHHHHHHHHHH
Confidence 999999999886 599999987531 11122111 1223455555 566666777889999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhc
Q 048639 411 VKNPPILLLDEATSALDSESEKLVQEALERAM-QGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQ 482 (1139)
Q Consensus 411 ~~~~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 482 (1139)
+.+|+++||||||++||+.+...+.+.|+++. +++|+|++||+++.+.. ||++++|++|++++.|+++++.+
T Consensus 152 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 225 (240)
T PRK09493 152 AVKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQVLIK 225 (240)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeCCHHHHhc
Confidence 99999999999999999999999999998875 48999999999999975 99999999999999999988754
No 333
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.4e-41 Score=376.35 Aligned_cols=221 Identities=29% Similarity=0.515 Sum_probs=182.8
Q ss_pred cccEEEEeEEEECCCCC--CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCC----C-
Q 048639 883 KGRIEFQNIKFNYPSRP--EVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKE----Y- 955 (1139)
Q Consensus 883 ~g~I~~~nvsf~Y~~~~--~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~----~- 955 (1139)
.+.|+++|++++|++++ ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++.. .
T Consensus 4 ~~~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~ 83 (289)
T PRK13645 4 SKDIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIK 83 (289)
T ss_pred cceEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEccccccccc
Confidence 46799999999997432 1359999999999999999999999999999999999999999999999998852 2
Q ss_pred ChHHHhhhceEEcccc--ccccccHHHHhccCCC--cCCH----HHHHHHHHHcCch-HHHhhCCCCccccccCCCCCCC
Q 048639 956 NLRRLRSQIGLVQQEP--LLFSCSIRNNICYGNE--AASE----AEIVEVSKKANIH-DFISSLPDGYDTVVGEKGCQLS 1026 (1139)
Q Consensus 956 ~l~~lR~~i~~V~Qdp--~LF~gTIreNL~~~~~--~~sd----~ei~~al~~~~l~-~~i~~lp~gldt~v~e~G~~LS 1026 (1139)
+...+|++++|+||+| .+|..|+++|+.++.. .... +++.++++..++. ++ .......||
T Consensus 84 ~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~ll~~~~L~~~~-----------~~~~~~~LS 152 (289)
T PRK13645 84 EVKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNLGENKQEAYKKVPELLKLVQLPEDY-----------VKRSPFELS 152 (289)
T ss_pred cHHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhH-----------hcCChhhCC
Confidence 4567888999999998 4778899999986421 1222 2344555555552 22 223346799
Q ss_pred hHHHHHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEE
Q 048639 1027 GGQKQRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVM 1105 (1139)
Q Consensus 1027 gGQrQrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl 1105 (1139)
||||||++|||||+++|++|||||||++||+.+.+.+.+.|++... ..++|||+|||+++.+.. ||+|++|
T Consensus 153 ~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~--------~~~~tiiiisH~~~~~~~~~d~i~~l 224 (289)
T PRK13645 153 GGQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNK--------EYKKRIIMVTHNMDQVLRIADEVIVM 224 (289)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH--------hcCCEEEEEecCHHHHHHhCCEEEEE
Confidence 9999999999999999999999999999999999999999987641 224569999999998865 9999999
Q ss_pred eCCEEEEecChhHHhhc
Q 048639 1106 DKGEVVEMGSHSTLVAE 1122 (1139)
Q Consensus 1106 ~~G~ive~G~~~eLl~~ 1122 (1139)
++|++++.|+++++.+.
T Consensus 225 ~~G~i~~~g~~~~~~~~ 241 (289)
T PRK13645 225 HEGKVISIGSPFEIFSN 241 (289)
T ss_pred ECCEEEEeCCHHHHhcC
Confidence 99999999999988653
No 334
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=5.5e-41 Score=371.69 Aligned_cols=229 Identities=29% Similarity=0.442 Sum_probs=186.8
Q ss_pred cEEEEeEEEECCCC------CCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHH
Q 048639 256 NIDIRDVCFAYPSR------PDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLK 329 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~------~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~ 329 (1139)
.|+++|++|+|++. .++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+..
T Consensus 2 ~l~~~~l~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~ 81 (265)
T TIGR02769 2 LLEVRDVTHTYRTGGLFGAKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRK 81 (265)
T ss_pred eEEEEeEEEEeccCccccccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEccccCHH
Confidence 37899999999632 135699999999999999999999999999999999999999999999999998876554
Q ss_pred ---HHhcceEEEecCCC--CC-cccHHHHHhcCCC---CCCHHHHHHHHHHhcHHHHHHhCCCCCC-ccccccCCCCChH
Q 048639 330 ---SLRKNIGAVSQEPS--LF-TGSLMDNIKVGNM---DADDEQIYNASMMANAHSFISQLPDQYS-TELGQRGVQLSGG 399 (1139)
Q Consensus 330 ---~~~~~i~~v~Q~~~--l~-~~ti~~ni~~g~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~i~~~g~~LSgG 399 (1139)
.+++.|+|++|++. ++ ..|++||+.++.. ....++ ....+.+.++.+ |++ ......+.+||||
T Consensus 82 ~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~-----~~~~~~~~l~~~--gl~~~~~~~~~~~LSgG 154 (265)
T TIGR02769 82 QRRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLTSLDESE-----QKARIAELLDMV--GLRSEDADKLPRQLSGG 154 (265)
T ss_pred HHHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhcCCCHHH-----HHHHHHHHHHHc--CCChhhhhCChhhCCHH
Confidence 35778999999983 44 3699999975321 111111 112233455555 454 3456788899999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CCeEEEEecCccchhc-cCEEEEEeCcEEEEecC
Q 048639 400 QKQRIAIARAIVKNPPILLLDEATSALDSESEKLVQEALERAMQ--GRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGT 476 (1139)
Q Consensus 400 qkqRi~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~ 476 (1139)
||||++|||||+.+|++|||||||++||+.++..+.+.|+++.+ ++|+|++||+++.+.. ||++++|++|++++.|+
T Consensus 155 e~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~ 234 (265)
T TIGR02769 155 QLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLRLVQSFCQRVAVMDKGQIVEECD 234 (265)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHHhcEEEEEeCCEEEEECC
Confidence 99999999999999999999999999999999999999988753 7999999999999975 99999999999999999
Q ss_pred hhhhhcc-chHHHHHH
Q 048639 477 HHSLLQT-SDFYNRLF 491 (1139)
Q Consensus 477 ~~~l~~~-~~~~~~~~ 491 (1139)
++++... ++.++.+.
T Consensus 235 ~~~~~~~~~~~~~~~~ 250 (265)
T TIGR02769 235 VAQLLSFKHPAGRNLQ 250 (265)
T ss_pred HHHHcCCCCHHHHHHH
Confidence 9999763 33444443
No 335
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5e-41 Score=370.28 Aligned_cols=220 Identities=29% Similarity=0.494 Sum_probs=182.3
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCC-----CccEEEECCccCC--CCCH
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDP-----SNGDILIDSLNIK--DLDL 328 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~-----~~G~i~~~g~~~~--~~~~ 328 (1139)
.|+++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++| ++|+|.++|+++. +.+.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 80 (253)
T PRK14267 4 AIETVNLRVYYGS---NHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDP 80 (253)
T ss_pred eEEEEeEEEEeCC---eeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccCh
Confidence 4899999999963 3599999999999999999999999999999999999987 4999999999986 4455
Q ss_pred HHHhcceEEEecCCCCCcc-cHHHHHhcCCC--C--CCHHHHHHHHHHhcHHHHHHhC--CCCCCccccccCCCCChHHH
Q 048639 329 KSLRKNIGAVSQEPSLFTG-SLMDNIKVGNM--D--ADDEQIYNASMMANAHSFISQL--PDQYSTELGQRGVQLSGGQK 401 (1139)
Q Consensus 329 ~~~~~~i~~v~Q~~~l~~~-ti~~ni~~g~~--~--~~~~~~~~~~~~~~~~~~i~~l--~~g~~t~i~~~g~~LSgGqk 401 (1139)
..++++++|++|++.+|.. |++||+.++.. . ...++..+. +.+.++.+ ...+.......+.+||||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~ 155 (253)
T PRK14267 81 IEVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGLVKSKKELDER-----VEWALKKAALWDEVKDRLNDYPSNLSGGQR 155 (253)
T ss_pred HHHhhceeEEecCCccCCCCcHHHHHHHHHHhcCccCCHHHHHHH-----HHHHHHHcCCccchhhhhccChhhCCHHHH
Confidence 5678899999999999975 99999987531 1 011221111 11223332 11112335667889999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhh
Q 048639 402 QRIAIARAIVKNPPILLLDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSL 480 (1139)
Q Consensus 402 qRi~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l 480 (1139)
||++|||||+++|+++||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 156 qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 235 (253)
T PRK14267 156 QRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKKEYTIVLVTHSPAQAARVSDYVAFLYLGKLIEVGPTRKV 235 (253)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988667999999999999875 999999999999999999988
Q ss_pred hcc
Q 048639 481 LQT 483 (1139)
Q Consensus 481 ~~~ 483 (1139)
.+.
T Consensus 236 ~~~ 238 (253)
T PRK14267 236 FEN 238 (253)
T ss_pred HhC
Confidence 653
No 336
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-40 Score=372.00 Aligned_cols=220 Identities=30% Similarity=0.536 Sum_probs=184.2
Q ss_pred EEEEeEEEECCCCC--CCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCC----CHHH
Q 048639 257 IDIRDVCFAYPSRP--DQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDL----DLKS 330 (1139)
Q Consensus 257 i~~~~v~~~y~~~~--~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~----~~~~ 330 (1139)
|+++|++++|++.. .+++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++... +...
T Consensus 3 l~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (280)
T PRK13649 3 INLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDIKQ 82 (280)
T ss_pred EEEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCHHH
Confidence 78999999997421 13699999999999999999999999999999999999999999999999988653 3456
Q ss_pred HhcceEEEecCC--CCCcccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhCCCCCC-ccccccCCCCChHHHHHHH
Q 048639 331 LRKNIGAVSQEP--SLFTGSLMDNIKVGNM--DADDEQIYNASMMANAHSFISQLPDQYS-TELGQRGVQLSGGQKQRIA 405 (1139)
Q Consensus 331 ~~~~i~~v~Q~~--~l~~~ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~i~~~g~~LSgGqkqRi~ 405 (1139)
+++.|+|++|++ .+|+.|++||+.++.. ..+.++..+. +.+.++.+ |++ ......+.+||||||||++
T Consensus 83 ~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--~l~~~~~~~~~~~LSgG~~qrv~ 155 (280)
T PRK13649 83 IRKKVGLVFQFPESQLFEETVLKDVAFGPQNFGVSQEEAEAL-----AREKLALV--GISESLFEKNPFELSGGQMRRVA 155 (280)
T ss_pred HHhheEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHc--CCChhhhhCCcccCCHHHHHHHH
Confidence 788999999998 6788899999987531 1222222211 22344444 443 2456778899999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhcc
Q 048639 406 IARAIVKNPPILLLDEATSALDSESEKLVQEALERAM-QGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQT 483 (1139)
Q Consensus 406 lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 483 (1139)
|||||+.+|++|||||||++||+.+++.+.+.|+++. +++|+|++||+++.+.. ||++++|++|++++.|+++++...
T Consensus 156 la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 235 (280)
T PRK13649 156 IAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGKLVLSGKPKDIFQD 235 (280)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 9999999999999999999999999999999998875 47899999999999865 999999999999999999988653
No 337
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.9e-41 Score=379.11 Aligned_cols=229 Identities=23% Similarity=0.393 Sum_probs=187.4
Q ss_pred EEEEeEEEECCCCCC-cccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccc----CCccEEEECCcccCCCChHHH
Q 048639 886 IEFQNIKFNYPSRPE-VTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYD----PNEGIILIDGKGIKEYNLRRL 960 (1139)
Q Consensus 886 I~~~nvsf~Y~~~~~-~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~----p~~G~I~idG~di~~~~l~~l 960 (1139)
|+++||+++|+.+.. .++|+||||+|++||.+||||+||||||||+++|+|+++ |++|+|.+||.|+.+++.+.+
T Consensus 4 L~v~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~~ 83 (326)
T PRK11022 4 LNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKER 83 (326)
T ss_pred EEEeCeEEEECCCCccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHHH
Confidence 799999999974322 369999999999999999999999999999999999997 489999999999999887765
Q ss_pred hh----hceEEccccc--ccc-ccHHH----HhccCC--C-cCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCC
Q 048639 961 RS----QIGLVQQEPL--LFS-CSIRN----NICYGN--E-AASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLS 1026 (1139)
Q Consensus 961 R~----~i~~V~Qdp~--LF~-gTIre----NL~~~~--~-~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LS 1026 (1139)
|+ +++||||+|. ++. -|+.+ |+.... . ....+++.++++.+++.+.... ......+||
T Consensus 84 ~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~--------l~~~p~~LS 155 (326)
T PRK11022 84 RNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKKTRRQRAIDLLNQVGIPDPASR--------LDVYPHQLS 155 (326)
T ss_pred HHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChHHH--------HhCCchhCC
Confidence 54 6999999995 332 35554 443321 1 1224567888999998643211 223446799
Q ss_pred hHHHHHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEE
Q 048639 1027 GGQKQRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVM 1105 (1139)
Q Consensus 1027 gGQrQrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl 1105 (1139)
||||||++|||||+.+|++||+||||++||+.+...|.+.|+++.. +.++|+|+|||+++.+.. ||||+||
T Consensus 156 gGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~--------~~g~til~iTHdl~~~~~~adri~vm 227 (326)
T PRK11022 156 GGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQ--------KENMALVLITHDLALVAEAAHKIIVM 227 (326)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHH--------hcCCEEEEEeCCHHHHHHhCCEEEEE
Confidence 9999999999999999999999999999999999999999998641 224569999999999865 9999999
Q ss_pred eCCEEEEecChhHHhhccCChHHHH
Q 048639 1106 DKGEVVEMGSHSTLVAESQGVYSRL 1130 (1139)
Q Consensus 1106 ~~G~ive~G~~~eLl~~~~g~f~~l 1130 (1139)
++|+|+|.|+++++++++...|.+.
T Consensus 228 ~~G~ive~g~~~~~~~~p~hpyt~~ 252 (326)
T PRK11022 228 YAGQVVETGKAHDIFRAPRHPYTQA 252 (326)
T ss_pred ECCEEEEECCHHHHhhCCCChHHHH
Confidence 9999999999999998766667544
No 338
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.8e-41 Score=374.34 Aligned_cols=215 Identities=29% Similarity=0.464 Sum_probs=178.6
Q ss_pred EEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHH----hc
Q 048639 258 DIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSL----RK 333 (1139)
Q Consensus 258 ~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~----~~ 333 (1139)
.++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+ ++
T Consensus 26 ~~~~~~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~ 102 (269)
T cd03294 26 SKEEILKKTGQ---TVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRK 102 (269)
T ss_pred hhhhhhhhcCC---ceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcC
Confidence 46688888853 459999999999999999999999999999999999999999999999999877665443 46
Q ss_pred ceEEEecCCCCCc-ccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHH
Q 048639 334 NIGAVSQEPSLFT-GSLMDNIKVGNM--DADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAI 410 (1139)
Q Consensus 334 ~i~~v~Q~~~l~~-~ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal 410 (1139)
+++|++|++.+|+ .|++||+.++.. .....+.. ..+.+.++.+ |+...+.....+||||||||++|||||
T Consensus 103 ~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~Gq~qrv~lAral 175 (269)
T cd03294 103 KISMVFQSFALLPHRTVLENVAFGLEVQGVPRAERE-----ERAAEALELV--GLEGWEHKYPDELSGGMQQRVGLARAL 175 (269)
T ss_pred cEEEEecCcccCCCCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CCHhHhhCCcccCCHHHHHHHHHHHHH
Confidence 7999999999985 599999987521 11111111 1122344444 444445666779999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhc
Q 048639 411 VKNPPILLLDEATSALDSESEKLVQEALERAM--QGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQ 482 (1139)
Q Consensus 411 ~~~~~illlDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 482 (1139)
+.+|++|||||||++||+.+.+.+.+.|.++. .|+|+|++||+++.+.. ||++++|++|++++.|+++++.+
T Consensus 176 ~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 250 (269)
T cd03294 176 AVDPDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEILT 250 (269)
T ss_pred hcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999999999999998874 37999999999998865 99999999999999999998865
No 339
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=4.9e-41 Score=349.33 Aligned_cols=178 Identities=37% Similarity=0.677 Sum_probs=164.3
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcceE
Q 048639 257 IDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNIG 336 (1139)
Q Consensus 257 i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 336 (1139)
|+++|++++|++. ++++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++... ...+++.++
T Consensus 1 i~~~~~~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~ 78 (178)
T cd03247 1 LSINNVSFSYPEQ-EQQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEITLDGVPVSDL-EKALSSLIS 78 (178)
T ss_pred CEEEEEEEEeCCC-CccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCEEHHHH-HHHHHhhEE
Confidence 4789999999743 23699999999999999999999999999999999999999999999999987655 556788999
Q ss_pred EEecCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHccCCCE
Q 048639 337 AVSQEPSLFTGSLMDNIKVGNMDADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVKNPPI 416 (1139)
Q Consensus 337 ~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~~~~i 416 (1139)
|++|++++|+.|++||+ +.+||||||||++||||++++|++
T Consensus 79 ~~~q~~~~~~~tv~~~i---------------------------------------~~~LS~G~~qrv~laral~~~p~~ 119 (178)
T cd03247 79 VLNQRPYLFDTTLRNNL---------------------------------------GRRFSGGERQRLALARILLQDAPI 119 (178)
T ss_pred EEccCCeeecccHHHhh---------------------------------------cccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999997 458999999999999999999999
Q ss_pred EEEeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhccCEEEEEeCcEEEEec
Q 048639 417 LLLDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVNADMIAVVEDGQVTETG 475 (1139)
Q Consensus 417 lllDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g 475 (1139)
+||||||++||+.+++.+.+.++++.+++|+|++||+++.+..||++++|++|++++.|
T Consensus 120 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~i~~~~ 178 (178)
T cd03247 120 VLLDEPTVGLDPITERQLLSLIFEVLKDKTLIWITHHLTGIEHMDKILFLENGKIIMQG 178 (178)
T ss_pred EEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEecC
Confidence 99999999999999999999998887789999999999999889999999999998754
No 340
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.5e-41 Score=384.53 Aligned_cols=213 Identities=33% Similarity=0.536 Sum_probs=177.5
Q ss_pred ccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHH----hcceEEEecCCCCCc-c
Q 048639 273 LILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSL----RKNIGAVSQEPSLFT-G 347 (1139)
Q Consensus 273 ~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~----~~~i~~v~Q~~~l~~-~ 347 (1139)
.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+ +++++||+|++.+|+ .
T Consensus 42 ~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~ 121 (400)
T PRK10070 42 LGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHM 121 (400)
T ss_pred EEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCC
Confidence 37999999999999999999999999999999999999999999999999988776543 468999999999997 4
Q ss_pred cHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCC
Q 048639 348 SLMDNIKVGNM--DADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVKNPPILLLDEATSA 425 (1139)
Q Consensus 348 ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~~~~illlDEpts~ 425 (1139)
|++||+.++.. ....++.. ..+.+.++.+ |++......+.+||||||||++|||||+.+|++|||||||++
T Consensus 122 Tv~enl~~~~~~~~~~~~~~~-----~~~~e~L~~~--gL~~~~~~~~~~LSgGq~QRv~LArAL~~~P~iLLLDEPts~ 194 (400)
T PRK10070 122 TVLDNTAFGMELAGINAEERR-----EKALDALRQV--GLENYAHSYPDELSGGMRQRVGLARALAINPDILLMDEAFSA 194 (400)
T ss_pred CHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CCChhhhcCcccCCHHHHHHHHHHHHHhcCCCEEEEECCCcc
Confidence 99999998632 11111111 1223445554 555556677889999999999999999999999999999999
Q ss_pred CCHHhHHHHHHHHHHHc--CCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhccc--hHHHHHHh
Q 048639 426 LDSESEKLVQEALERAM--QGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQTS--DFYNRLFT 492 (1139)
Q Consensus 426 LD~~~~~~i~~~l~~~~--~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~--~~~~~~~~ 492 (1139)
||+.+++.+.+.|.++. .++|+|++||+++.+.. ||+|++|++|++++.|+++++.... .+.+.++.
T Consensus 195 LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~Dri~vL~~G~i~~~g~~~~l~~~~~~~~v~~~~~ 266 (400)
T PRK10070 195 LDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEILNNPANDYVRTFFR 266 (400)
T ss_pred CCHHHHHHHHHHHHHHHHHCCCeEEEEECCHHHHHHhCCEEEEEECCEEEecCCHHHHHhCcccHHHHHHHh
Confidence 99999999999998874 48999999999999865 9999999999999999999987643 33444443
No 341
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=5e-41 Score=359.06 Aligned_cols=203 Identities=26% Similarity=0.454 Sum_probs=172.4
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcceE
Q 048639 257 IDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNIG 336 (1139)
Q Consensus 257 i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 336 (1139)
|+++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++... ..+++.++
T Consensus 1 l~~~~l~~~~~~---~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~--~~~~~~i~ 75 (208)
T cd03268 1 LKTNDLTKTYGK---KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKN--IEALRRIG 75 (208)
T ss_pred CEEEEEEEEECC---eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccch--HHHHhhEE
Confidence 478999999963 4699999999999999999999999999999999999999999999999988654 45677899
Q ss_pred EEecCCCCCc-ccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHccC
Q 048639 337 AVSQEPSLFT-GSLMDNIKVGNM--DADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVKN 413 (1139)
Q Consensus 337 ~v~Q~~~l~~-~ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~~ 413 (1139)
||+|++.++. .|++||+.++.. ....+++.+++ +.+ |++......+.+||||||||++||||++.+
T Consensus 76 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l---------~~~--~l~~~~~~~~~~LS~G~~qrv~la~al~~~ 144 (208)
T cd03268 76 ALIEAPGFYPNLTARENLRLLARLLGIRKKRIDEVL---------DVV--GLKDSAKKKVKGFSLGMKQRLGIALALLGN 144 (208)
T ss_pred EecCCCccCccCcHHHHHHHHHHhcCCcHHHHHHHH---------HHc--CCHHHHhhhHhhCCHHHHHHHHHHHHHhcC
Confidence 9999998885 699999987531 12223333333 333 333344566779999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCCeEEEEecCccchhc-cCEEEEEeCcEEEEec
Q 048639 414 PPILLLDEATSALDSESEKLVQEALERAM-QGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETG 475 (1139)
Q Consensus 414 ~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g 475 (1139)
|+++||||||++||+.+.+.+.+.++++. +++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 145 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 145 PDLLILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred CCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999999998865 48999999999999875 9999999999998765
No 342
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-40 Score=370.20 Aligned_cols=218 Identities=26% Similarity=0.499 Sum_probs=184.7
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCC-HHHHhcce
Q 048639 257 IDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLD-LKSLRKNI 335 (1139)
Q Consensus 257 i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~-~~~~~~~i 335 (1139)
++++|++++|++ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+ ...+++.+
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 79 (274)
T PRK13644 2 IRLENVSYSYPD--GTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKLV 79 (274)
T ss_pred EEEEEEEEEcCC--CCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhhe
Confidence 789999999963 245999999999999999999999999999999999999999999999999987664 35677899
Q ss_pred EEEecCCC--CCcccHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHc
Q 048639 336 GAVSQEPS--LFTGSLMDNIKVGNMD--ADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIV 411 (1139)
Q Consensus 336 ~~v~Q~~~--l~~~ti~~ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~ 411 (1139)
+|++|+|. +++.|++|||.++... .+.++..+ .+.+.++.+ |++......+..||||||||++|||||+
T Consensus 80 ~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~laral~ 152 (274)
T PRK13644 80 GIVFQNPETQFVGRTVEEDLAFGPENLCLPPIEIRK-----RVDRALAEI--GLEKYRHRSPKTLSGGQGQCVALAGILT 152 (274)
T ss_pred EEEEEChhhhcccchHHHHHHhhHHHcCCCHHHHHH-----HHHHHHHHC--CCHHHhcCCcccCCHHHHHHHHHHHHHH
Confidence 99999985 5678999999886321 12222221 122334444 4555566778899999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCCeEEEEecCccchhccCEEEEEeCcEEEEecChhhhhcc
Q 048639 412 KNPPILLLDEATSALDSESEKLVQEALERAM-QGRTVILIAHRMSTIVNADMIAVVEDGQVTETGTHHSLLQT 483 (1139)
Q Consensus 412 ~~~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 483 (1139)
.+|+++||||||++||+.++..+.+.++++. +|+|+|++||+++.+..||+|++|++|++++.|+++++...
T Consensus 153 ~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 225 (274)
T PRK13644 153 MEPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLEELHDADRIIVMDRGKIVLEGEPENVLSD 225 (274)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHhhCCEEEEEECCEEEEECCHHHHhcC
Confidence 9999999999999999999999999998865 48999999999999977999999999999999999987653
No 343
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=5.6e-41 Score=362.38 Aligned_cols=209 Identities=29% Similarity=0.507 Sum_probs=174.9
Q ss_pred EEEEeEEEECCCCC-CCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHH---Hh
Q 048639 257 IDIRDVCFAYPSRP-DQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKS---LR 332 (1139)
Q Consensus 257 i~~~~v~~~y~~~~-~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~---~~ 332 (1139)
++++|++++|++.. .+++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... ++
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (221)
T TIGR02211 2 LKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKLR 81 (221)
T ss_pred EEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHHH
Confidence 68999999996421 246999999999999999999999999999999999999999999999999987766543 33
Q ss_pred -cceEEEecCCCCCc-ccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHH
Q 048639 333 -KNIGAVSQEPSLFT-GSLMDNIKVGNM--DADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIAR 408 (1139)
Q Consensus 333 -~~i~~v~Q~~~l~~-~ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lAR 408 (1139)
+.++|++|++.+|+ .|++||+.++.. .....+.. ..+.+.++.+ |++......+..||||||||++|||
T Consensus 82 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~lar 154 (221)
T TIGR02211 82 NKKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEAK-----ERAYEMLEKV--GLEHRINHRPSELSGGERQRVAIAR 154 (221)
T ss_pred HhcEEEEecccccCCCCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CChhhhhCChhhCCHHHHHHHHHHH
Confidence 67999999999886 599999987421 11111111 1123445555 5555667778899999999999999
Q ss_pred HHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCCeEEEEecCccchhccCEEEEEeCcEEE
Q 048639 409 AIVKNPPILLLDEATSALDSESEKLVQEALERAM--QGRTVILIAHRMSTIVNADMIAVVEDGQVT 472 (1139)
Q Consensus 409 al~~~~~illlDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~~~~~~~~d~i~~l~~G~i~ 472 (1139)
||+.+|++|||||||++||+.++..+.+.|+++. .++|+|++||+++.+..||++++|++|+++
T Consensus 155 al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~d~v~~l~~G~i~ 220 (221)
T TIGR02211 155 ALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLELAKKLDRVLEMKDGQLF 220 (221)
T ss_pred HHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEEEeCCEec
Confidence 9999999999999999999999999999998874 378999999999998889999999999985
No 344
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=2.9e-41 Score=362.26 Aligned_cols=199 Identities=32% Similarity=0.558 Sum_probs=171.0
Q ss_pred EEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhceE
Q 048639 887 EFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQIGL 966 (1139)
Q Consensus 887 ~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~~ 966 (1139)
+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++. .+|++++|
T Consensus 1 ~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~-----~~~~~i~~ 72 (213)
T cd03235 1 EVEDLTVSYGG---HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLE-----KERKRIGY 72 (213)
T ss_pred CcccceeEECC---EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHH-----HHHhheEE
Confidence 36899999963 36999999999999999999999999999999999999999999999998764 47889999
Q ss_pred Ecccccc---ccccHHHHhccCCCc----------CCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHH
Q 048639 967 VQQEPLL---FSCSIRNNICYGNEA----------ASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRI 1033 (1139)
Q Consensus 967 V~Qdp~L---F~gTIreNL~~~~~~----------~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl 1033 (1139)
+||+|.+ |..|++||+.++... ..++++.++++..++.++..+. ..+||||||||+
T Consensus 73 v~q~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LSgG~~qrv 141 (213)
T cd03235 73 VPQRRSIDRDFPISVRDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELADRQ-----------IGELSGGQQQRV 141 (213)
T ss_pred eccccccccCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHhCC-----------cccCCHHHHHHH
Confidence 9999976 568999999864321 1235678888888887665432 247999999999
Q ss_pred HHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEEE
Q 048639 1034 AIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVVE 1112 (1139)
Q Consensus 1034 alARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ive 1112 (1139)
+|||||+++|++|||||||++||+++.+.+.+.|++.. +.++|+|+|||+++.+.. ||+|++|++| +++
T Consensus 142 ~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~---------~~~~tvi~~sH~~~~~~~~~d~i~~l~~~-~~~ 211 (213)
T cd03235 142 LLARALVQDPDLLLLDEPFAGVDPKTQEDIYELLRELR---------REGMTILVVTHDLGLVLEYFDRVLLLNRT-VVA 211 (213)
T ss_pred HHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHH---------hcCCEEEEEeCCHHHHHHhcCEEEEEcCc-Eee
Confidence 99999999999999999999999999999999999764 234569999999999976 9999999986 566
Q ss_pred ec
Q 048639 1113 MG 1114 (1139)
Q Consensus 1113 ~G 1114 (1139)
.|
T Consensus 212 ~g 213 (213)
T cd03235 212 SG 213 (213)
T ss_pred cC
Confidence 54
No 345
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=6.8e-41 Score=366.92 Aligned_cols=206 Identities=29% Similarity=0.420 Sum_probs=179.3
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhc
Q 048639 885 RIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQI 964 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i 964 (1139)
.|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++. .+|+++
T Consensus 12 ~l~i~~l~~~~~~---~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~-----~~~~~i 83 (257)
T PRK11247 12 PLLLNAVSKRYGE---RTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLA-----EAREDT 83 (257)
T ss_pred cEEEEEEEEEECC---cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHH-----HhhCce
Confidence 4999999999963 36999999999999999999999999999999999999999999999998753 467889
Q ss_pred eEEcccccccc-ccHHHHhccCCCcCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhcCCC
Q 048639 965 GLVQQEPLLFS-CSIRNNICYGNEAASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIARTLLKRP 1043 (1139)
Q Consensus 965 ~~V~Qdp~LF~-gTIreNL~~~~~~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalARALlr~p 1043 (1139)
+|+||+|.+|. .|++||+.++.....++++.++++..++.++... ...+||||||||++|||||+++|
T Consensus 84 ~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~gl~~~~~~-----------~~~~LSgGqkqrl~laraL~~~p 152 (257)
T PRK11247 84 RLMFQDARLLPWKKVIDNVGLGLKGQWRDAALQALAAVGLADRANE-----------WPAALSGGQKQRVALARALIHRP 152 (257)
T ss_pred EEEecCccCCCCCcHHHHHHhcccchHHHHHHHHHHHcCChhHhcC-----------ChhhCCHHHHHHHHHHHHHhcCC
Confidence 99999999987 6999999875322235678888999888765433 23579999999999999999999
Q ss_pred CEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEEEecChh
Q 048639 1044 AIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVVEMGSHS 1117 (1139)
Q Consensus 1044 ~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~ 1117 (1139)
++|||||||++||+.+...+.+.|++... ..++|+|+|||+++.+.. ||+|++|++|++++.|+.+
T Consensus 153 ~lllLDEPt~~LD~~~~~~l~~~L~~~~~--------~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 219 (257)
T PRK11247 153 GLLLLDEPLGALDALTRIEMQDLIESLWQ--------QHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVD 219 (257)
T ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHH--------HcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecccc
Confidence 99999999999999999999999987530 224469999999999865 9999999999999988764
No 346
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-40 Score=371.53 Aligned_cols=221 Identities=27% Similarity=0.498 Sum_probs=186.8
Q ss_pred ccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCc---cEEEECCccCCCCCHHHH
Q 048639 255 GNIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSN---GDILIDSLNIKDLDLKSL 331 (1139)
Q Consensus 255 ~~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~---G~i~~~g~~~~~~~~~~~ 331 (1139)
..|+++|++|+|++. .+++|+|+||+|++||+++|+||||||||||+++|+|+++|++ |+|.++|.++...+...+
T Consensus 4 ~~l~i~~l~~~~~~~-~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~ 82 (282)
T PRK13640 4 NIVEFKHVSFTYPDS-KKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDI 82 (282)
T ss_pred ceEEEEEEEEEcCCC-CccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHH
Confidence 359999999999642 2469999999999999999999999999999999999999998 899999999987777777
Q ss_pred hcceEEEecCCC--CCcccHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHH
Q 048639 332 RKNIGAVSQEPS--LFTGSLMDNIKVGNMD--ADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIA 407 (1139)
Q Consensus 332 ~~~i~~v~Q~~~--l~~~ti~~ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lA 407 (1139)
+++++||+|+|. +++.|++|||.++... .+.++..+ .+.+.++.+ |+.........+||||||||++||
T Consensus 83 ~~~ig~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~l~~~--~L~~~~~~~~~~LS~G~~qrv~la 155 (282)
T PRK13640 83 REKVGIVFQNPDNQFVGATVGDDVAFGLENRAVPRPEMIK-----IVRDVLADV--GMLDYIDSEPANLSGGQKQRVAIA 155 (282)
T ss_pred HhheEEEEECHHHhhccCCHHHHHHhhHHhCCCCHHHHHH-----HHHHHHHHC--CChhHhcCCcccCCHHHHHHHHHH
Confidence 889999999984 5678999999876322 22222211 122334444 444456667789999999999999
Q ss_pred HHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CCeEEEEecCccchhccCEEEEEeCcEEEEecChhhhhcc
Q 048639 408 RAIVKNPPILLLDEATSALDSESEKLVQEALERAMQ--GRTVILIAHRMSTIVNADMIAVVEDGQVTETGTHHSLLQT 483 (1139)
Q Consensus 408 Ral~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 483 (1139)
|||+.+|++|||||||++||+.++..+.+.|+++.+ |+|+|++||+++.+..||++++|++|++++.|+++++...
T Consensus 156 ral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 233 (282)
T PRK13640 156 GILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDEANMADQVLVLDDGKLLAQGSPVEIFSK 233 (282)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999999999999999988753 7999999999999877999999999999999999988653
No 347
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-40 Score=373.21 Aligned_cols=222 Identities=27% Similarity=0.502 Sum_probs=182.9
Q ss_pred ccEEEEeEEEECCCCC--CCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCC----C-C
Q 048639 255 GNIDIRDVCFAYPSRP--DQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKD----L-D 327 (1139)
Q Consensus 255 ~~i~~~~v~~~y~~~~--~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~----~-~ 327 (1139)
+.|+++|++++|+++. ..++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. . +
T Consensus 5 ~~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~ 84 (289)
T PRK13645 5 KDIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIKE 84 (289)
T ss_pred ceEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccccccccc
Confidence 5699999999997432 1359999999999999999999999999999999999999999999999998752 1 3
Q ss_pred HHHHhcceEEEecCC--CCCcccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhCCCCCC-ccccccCCCCChHHHH
Q 048639 328 LKSLRKNIGAVSQEP--SLFTGSLMDNIKVGNM--DADDEQIYNASMMANAHSFISQLPDQYS-TELGQRGVQLSGGQKQ 402 (1139)
Q Consensus 328 ~~~~~~~i~~v~Q~~--~l~~~ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~i~~~g~~LSgGqkq 402 (1139)
...+|+.|+|++|+| .+++.|++||+.++.. ....++..+. +.+.++.+ ++. ......+.+|||||||
T Consensus 85 ~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~-----~~~ll~~~--~L~~~~~~~~~~~LS~Gq~q 157 (289)
T PRK13645 85 VKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNLGENKQEAYKK-----VPELLKLV--QLPEDYVKRSPFELSGGQKR 157 (289)
T ss_pred HHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHc--CCChhHhcCChhhCCHHHHH
Confidence 456788999999998 4677899999987632 1222222221 12233333 331 2346678899999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhh
Q 048639 403 RIAIARAIVKNPPILLLDEATSALDSESEKLVQEALERAM--QGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHS 479 (1139)
Q Consensus 403 Ri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~ 479 (1139)
|++|||||+.+|++|||||||++||+.+++.+.+.|+++. .++|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 158 rv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 237 (289)
T PRK13645 158 RVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEGKVISIGSPFE 237 (289)
T ss_pred HHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 9999999999999999999999999999999999998864 37899999999998865 99999999999999999988
Q ss_pred hhcc
Q 048639 480 LLQT 483 (1139)
Q Consensus 480 l~~~ 483 (1139)
+...
T Consensus 238 ~~~~ 241 (289)
T PRK13645 238 IFSN 241 (289)
T ss_pred HhcC
Confidence 8654
No 348
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.8e-41 Score=372.17 Aligned_cols=222 Identities=28% Similarity=0.484 Sum_probs=185.3
Q ss_pred cEEEEeEEEECCCCC---CCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCC-HHHH
Q 048639 256 NIDIRDVCFAYPSRP---DQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLD-LKSL 331 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~---~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~-~~~~ 331 (1139)
.++++|++++|++.. ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.+.. ...+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 83 (280)
T PRK13633 4 MIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWDI 83 (280)
T ss_pred eEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHHH
Confidence 589999999997421 246999999999999999999999999999999999999999999999999987543 3557
Q ss_pred hcceEEEecCCC--CCcccHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHH
Q 048639 332 RKNIGAVSQEPS--LFTGSLMDNIKVGNMD--ADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIA 407 (1139)
Q Consensus 332 ~~~i~~v~Q~~~--l~~~ti~~ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lA 407 (1139)
++.++|+||+|. ++..|+.+|+.++... ....+..+ .+.+.++.+ |+.........+||||||||++||
T Consensus 84 ~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--gL~~~~~~~~~~LS~G~~qrv~la 156 (280)
T PRK13633 84 RNKAGMVFQNPDNQIVATIVEEDVAFGPENLGIPPEEIRE-----RVDESLKKV--GMYEYRRHAPHLLSGGQKQRVAIA 156 (280)
T ss_pred hhheEEEecChhhhhccccHHHHHHhhHhhcCCCHHHHHH-----HHHHHHHHC--CCHhHhhCCcccCCHHHHHHHHHH
Confidence 889999999984 6667999999986321 12222111 122334433 444455666789999999999999
Q ss_pred HHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCCeEEEEecCccchhccCEEEEEeCcEEEEecChhhhhccc
Q 048639 408 RAIVKNPPILLLDEATSALDSESEKLVQEALERAM--QGRTVILIAHRMSTIVNADMIAVVEDGQVTETGTHHSLLQTS 484 (1139)
Q Consensus 408 Ral~~~~~illlDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~ 484 (1139)
|||+.+|+++||||||++||+.++..+.+.|+++. .++|+|++||+++.+..||++++|++|++++.|+++++....
T Consensus 157 ral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~~ 235 (280)
T PRK13633 157 GILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEEAVEADRIIVMDSGKVVMEGTPKEIFKEV 235 (280)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHHHhcCCEEEEEECCEEEEecCHHHHhcCh
Confidence 99999999999999999999999999999998874 389999999999998789999999999999999999987643
No 349
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=5.7e-41 Score=378.14 Aligned_cols=216 Identities=28% Similarity=0.467 Sum_probs=181.3
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcce
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNI 335 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 335 (1139)
.|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++... ....++++
T Consensus 4 ~i~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-~~~~~~~i 79 (303)
T TIGR01288 4 AIDLVGVSKSYGD---KVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSR-ARLARVAI 79 (303)
T ss_pred EEEEEeEEEEeCC---eEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccc-HHHHhhcE
Confidence 5899999999963 4599999999999999999999999999999999999999999999999988653 34568899
Q ss_pred EEEecCCCCCc-ccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHcc
Q 048639 336 GAVSQEPSLFT-GSLMDNIKVGNM--DADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVK 412 (1139)
Q Consensus 336 ~~v~Q~~~l~~-~ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~ 412 (1139)
+|+||++.++. .|++||+.+... ..+..+..+.+ .+.++.+ |+.........+||||||||++|||||+.
T Consensus 80 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~-----~~ll~~~--~l~~~~~~~~~~LSgG~~qrv~la~al~~ 152 (303)
T TIGR01288 80 GVVPQFDNLDPEFTVRENLLVFGRYFGMSTREIEAVI-----PSLLEFA--RLESKADVRVALLSGGMKRRLTLARALIN 152 (303)
T ss_pred EEEeccccCCcCCcHHHHHHHHHHHcCCCHHHHHHHH-----HHHHHHC--CChhHhcCchhhCCHHHHHHHHHHHHHhc
Confidence 99999999885 599999975211 12222222211 2233333 34444556677999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhc
Q 048639 413 NPPILLLDEATSALDSESEKLVQEALERAM-QGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQ 482 (1139)
Q Consensus 413 ~~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 482 (1139)
+|+++||||||++||+.+...+.+.++++. +|+|+|++||+++.+.. ||+|++|++|+++..|+++++..
T Consensus 153 ~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 224 (303)
T TIGR01288 153 DPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLESGRKIAEGRPHALID 224 (303)
T ss_pred CCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 999999999999999999999999998874 48999999999999976 99999999999999999998854
No 350
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=5.8e-41 Score=369.26 Aligned_cols=217 Identities=30% Similarity=0.540 Sum_probs=183.5
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCC--------
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLD-------- 327 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~-------- 327 (1139)
.++++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (250)
T PRK11264 3 AIEVKNLVKKFHG---QTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKGL 79 (250)
T ss_pred cEEEeceEEEECC---eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhhH
Confidence 3899999999963 35999999999999999999999999999999999999999999999999886432
Q ss_pred HHHHhcceEEEecCCCCCc-ccHHHHHhcCCC---CCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHH
Q 048639 328 LKSLRKNIGAVSQEPSLFT-GSLMDNIKVGNM---DADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQR 403 (1139)
Q Consensus 328 ~~~~~~~i~~v~Q~~~l~~-~ti~~ni~~g~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqR 403 (1139)
...+++.++||+|++.+++ .|++||+.++.. ....++.. ..+.+.++.+ |++......+.+||||||||
T Consensus 80 ~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~~l~~~--gl~~~~~~~~~~LS~Gq~qr 152 (250)
T PRK11264 80 IRQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEAT-----ARARELLAKV--GLAGKETSYPRRLSGGQQQR 152 (250)
T ss_pred HHHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CCcchhhCChhhCChHHHHH
Confidence 3456788999999999886 599999986421 11121111 1123445555 55555667889999999999
Q ss_pred HHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhh
Q 048639 404 IAIARAIVKNPPILLLDEATSALDSESEKLVQEALERAM-QGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLL 481 (1139)
Q Consensus 404 i~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~ 481 (1139)
++|||||+.+|++|||||||++||+.+.+.+.+.|+++. +++|+|++||+++.+.. ||++++|++|++++.|+++++.
T Consensus 153 v~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 232 (250)
T PRK11264 153 VAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGPAKALF 232 (250)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999998875 48999999999999876 9999999999999999998875
Q ss_pred c
Q 048639 482 Q 482 (1139)
Q Consensus 482 ~ 482 (1139)
+
T Consensus 233 ~ 233 (250)
T PRK11264 233 A 233 (250)
T ss_pred c
Confidence 4
No 351
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.9e-41 Score=364.95 Aligned_cols=214 Identities=34% Similarity=0.543 Sum_probs=186.3
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhce
Q 048639 886 IEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQIG 965 (1139)
Q Consensus 886 I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~ 965 (1139)
|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+. .++.++
T Consensus 1 l~~~~l~~~~~~---~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~~G~i~~~g~~~~~~~~--~~~~i~ 75 (232)
T cd03300 1 IELENVSKFYGG---FVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPTSGEILLDGKDITNLPP--HKRPVN 75 (232)
T ss_pred CEEEeEEEEeCC---eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcceE
Confidence 578999999963 369999999999999999999999999999999999999999999999999987654 367899
Q ss_pred EEccccccccc-cHHHHhccCC------CcCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 048639 966 LVQQEPLLFSC-SIRNNICYGN------EAASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIART 1038 (1139)
Q Consensus 966 ~V~Qdp~LF~g-TIreNL~~~~------~~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalARA 1038 (1139)
|+||+|.+|.+ |+++|+.++. +...++++.++++..++.++....| .+||+|||||++||||
T Consensus 76 ~~~q~~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~lS~G~~qrl~lara 144 (232)
T cd03300 76 TVFQNYALFPHLTVFENIAFGLRLKKLPKAEIKERVAEALDLVQLEGYANRKP-----------SQLSGGQQQRVAIARA 144 (232)
T ss_pred EEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcCCh-----------hhCCHHHHHHHHHHHH
Confidence 99999999965 9999997532 1223456778888888877766554 4799999999999999
Q ss_pred hcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEEEecChh
Q 048639 1039 LLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVVEMGSHS 1117 (1139)
Q Consensus 1039 Llr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~ 1117 (1139)
|+++|++|||||||++||+.+.+.+.+.|++... ..++|+|+++|+++.+.. ||+|++|++|++++.|+++
T Consensus 145 l~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~--------~~~~tiii~sh~~~~~~~~~d~i~~l~~G~~~~~~~~~ 216 (232)
T cd03300 145 LVNEPKVLLLDEPLGALDLKLRKDMQLELKRLQK--------ELGITFVFVTHDQEEALTMSDRIAVMNKGKIQQIGTPE 216 (232)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH--------HcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCHH
Confidence 9999999999999999999999999999987640 124569999999999876 9999999999999999999
Q ss_pred HHhhcc
Q 048639 1118 TLVAES 1123 (1139)
Q Consensus 1118 eLl~~~ 1123 (1139)
++.+.+
T Consensus 217 ~~~~~~ 222 (232)
T cd03300 217 EIYEEP 222 (232)
T ss_pred HHHhCC
Confidence 998653
No 352
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=6.3e-41 Score=380.21 Aligned_cols=216 Identities=28% Similarity=0.488 Sum_probs=181.8
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcce
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNI 335 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 335 (1139)
.|+++|++++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+ ...++.|
T Consensus 41 ~i~i~nl~k~y~~---~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~-~~~~~~i 116 (340)
T PRK13536 41 AIDLAGVSKSYGD---KAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARA-RLARARI 116 (340)
T ss_pred eEEEEEEEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcch-HHHhccE
Confidence 5999999999963 45999999999999999999999999999999999999999999999999987543 4678899
Q ss_pred EEEecCCCCCc-ccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHcc
Q 048639 336 GAVSQEPSLFT-GSLMDNIKVGNM--DADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVK 412 (1139)
Q Consensus 336 ~~v~Q~~~l~~-~ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~ 412 (1139)
||+||++.++. .|++||+.+... .....+..+. +.+.++.+ |+.........+||||||||++|||||+.
T Consensus 117 g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~ll~~~--~L~~~~~~~~~~LS~G~kqrv~lA~aL~~ 189 (340)
T PRK13536 117 GVVPQFDNLDLEFTVRENLLVFGRYFGMSTREIEAV-----IPSLLEFA--RLESKADARVSDLSGGMKRRLTLARALIN 189 (340)
T ss_pred EEEeCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHc--CCchhhCCChhhCCHHHHHHHHHHHHHhc
Confidence 99999999875 599999985321 1122222111 12233333 33334455667999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhc
Q 048639 413 NPPILLLDEATSALDSESEKLVQEALERAM-QGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQ 482 (1139)
Q Consensus 413 ~~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 482 (1139)
+|+++||||||++||+.++..+.+.|+++. +|+|+|++||+++.+.. ||+|++|++|+++..|+++++..
T Consensus 190 ~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~ 261 (340)
T PRK13536 190 DPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRPHALID 261 (340)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 999999999999999999999999998875 48999999999999976 99999999999999999999864
No 353
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=8e-41 Score=368.90 Aligned_cols=213 Identities=24% Similarity=0.454 Sum_probs=186.6
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhce
Q 048639 886 IEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQIG 965 (1139)
Q Consensus 886 I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~ 965 (1139)
|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 2 l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 78 (256)
T TIGR03873 2 LRLSRVSWSAGG---RLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPDAGTVDLAGVDLHGLSRRARARRVA 78 (256)
T ss_pred ceEEeEEEEECC---EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEEcccCCHHHHhhheE
Confidence 789999999963 46999999999999999999999999999999999999999999999999999888888888999
Q ss_pred EEccccc-cccccHHHHhccCCC----------cCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHH
Q 048639 966 LVQQEPL-LFSCSIRNNICYGNE----------AASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIA 1034 (1139)
Q Consensus 966 ~V~Qdp~-LF~gTIreNL~~~~~----------~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrla 1034 (1139)
|+||++. .+..|+++|+.++.. ...++++.++++.+++.+..++ ....||||||||++
T Consensus 79 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrl~ 147 (256)
T TIGR03873 79 LVEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELSHLADR-----------DMSTLSGGERQRVH 147 (256)
T ss_pred EecccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcHhhhcC-----------CcccCCHHHHHHHH
Confidence 9999985 456899999976521 0123467788888888665433 23579999999999
Q ss_pred HHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEEEe
Q 048639 1035 IARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVVEM 1113 (1139)
Q Consensus 1035 lARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ive~ 1113 (1139)
||||++.+|+++||||||++||+.+...+.+.|++.. .+++|+|++||+++.+.. ||+|++|++|++++.
T Consensus 148 la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~---------~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~ 218 (256)
T TIGR03873 148 VARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELA---------ATGVTVVAALHDLNLAASYCDHVVVLDGGRVVAA 218 (256)
T ss_pred HHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHH---------hcCCEEEEEeCCHHHHHHhCCEEEEEeCCCEEEe
Confidence 9999999999999999999999999999999999764 334569999999999965 999999999999999
Q ss_pred cChhHHhh
Q 048639 1114 GSHSTLVA 1121 (1139)
Q Consensus 1114 G~~~eLl~ 1121 (1139)
|+++++.+
T Consensus 219 g~~~~~~~ 226 (256)
T TIGR03873 219 GPPREVLT 226 (256)
T ss_pred cCHHHhhC
Confidence 99999864
No 354
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.3e-41 Score=369.84 Aligned_cols=225 Identities=27% Similarity=0.447 Sum_probs=185.4
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcce
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNI 335 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 335 (1139)
.++++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.+
T Consensus 11 ~l~i~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 87 (265)
T PRK10575 11 TFALRNVSFRVPG---RTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARKV 87 (265)
T ss_pred eEEEeeEEEEECC---EEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHHHhhhe
Confidence 5999999999963 4699999999999999999999999999999999999999999999999998877777888899
Q ss_pred EEEecCCCCCcc-cHHHHHhcCCCCC------CHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHH
Q 048639 336 GAVSQEPSLFTG-SLMDNIKVGNMDA------DDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIAR 408 (1139)
Q Consensus 336 ~~v~Q~~~l~~~-ti~~ni~~g~~~~------~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lAR 408 (1139)
+|++|++.++.. |+.||+.++.... ..... ...+.+.++.+ |+.........+||||||||++|||
T Consensus 88 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~lar 160 (265)
T PRK10575 88 AYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAAD-----REKVEEAISLV--GLKPLAHRLVDSLSGGERQRAWIAM 160 (265)
T ss_pred EEeccCCCCCCCccHHHHHHhCcccccccccCCCHHH-----HHHHHHHHHHc--CCHHHhcCCcccCCHHHHHHHHHHH
Confidence 999999877665 9999998763210 00100 01112233333 3333345556789999999999999
Q ss_pred HHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhccch
Q 048639 409 AIVKNPPILLLDEATSALDSESEKLVQEALERAM--QGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQTSD 485 (1139)
Q Consensus 409 al~~~~~illlDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~ 485 (1139)
||+.+|++|||||||++||+.+.+.+.+.|.++. .++|+|++||+++.+.. ||+|++|++|++++.|+++++... .
T Consensus 161 al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~~~~~~~~~~~~-~ 239 (265)
T PRK10575 161 LVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAELMRG-E 239 (265)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHhcCH-H
Confidence 9999999999999999999999999999998874 37999999999999865 999999999999999999888653 3
Q ss_pred HHHHHH
Q 048639 486 FYNRLF 491 (1139)
Q Consensus 486 ~~~~~~ 491 (1139)
.+..++
T Consensus 240 ~~~~~~ 245 (265)
T PRK10575 240 TLEQIY 245 (265)
T ss_pred HHHHHh
Confidence 334443
No 355
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-40 Score=370.88 Aligned_cols=221 Identities=31% Similarity=0.503 Sum_probs=187.7
Q ss_pred ccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccc-----CCccEEEECCcccCC--CC
Q 048639 884 GRIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYD-----PNEGIILIDGKGIKE--YN 956 (1139)
Q Consensus 884 g~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~-----p~~G~I~idG~di~~--~~ 956 (1139)
..|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.++|.++.. .+
T Consensus 38 ~~l~i~~l~~~~~~---~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G~~i~~~~~~ 114 (285)
T PRK14254 38 TVIEARDLNVFYGD---EQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRGKNVYDADVD 114 (285)
T ss_pred ceEEEEEEEEEECC---EeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccc
Confidence 35899999999963 369999999999999999999999999999999999997 689999999999864 34
Q ss_pred hHHHhhhceEEccccccccccHHHHhccCC-----CcCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHH
Q 048639 957 LRRLRSQIGLVQQEPLLFSCSIRNNICYGN-----EAASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQ 1031 (1139)
Q Consensus 957 l~~lR~~i~~V~Qdp~LF~gTIreNL~~~~-----~~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQ 1031 (1139)
...+|++++||||++.+|..|+++|+.++. +...+++++++++..++...+.. .......+|||||||
T Consensus 115 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~-------~~~~~~~~LSgGe~q 187 (285)
T PRK14254 115 PVALRRRIGMVFQKPNPFPKSIYDNVAYGLKIQGYDGDIDERVEESLRRAALWDEVKD-------QLDSSGLDLSGGQQQ 187 (285)
T ss_pred hHhhhccEEEEecCCccCcCCHHHHHHHHHHHcCCcHHHHHHHHHHHHHcCCCchhHH-------HHhCCcccCCHHHHH
Confidence 567889999999999999899999998642 11124567888888887544321 123445689999999
Q ss_pred HHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEE-EEeCCE
Q 048639 1032 RIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIV-VMDKGE 1109 (1139)
Q Consensus 1032 rlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~-vl~~G~ 1109 (1139)
|++|||||+++|+||||||||++||+.+.+.+.+.|+++. ++ .|+|+++|+++.+.. |||++ +|++|+
T Consensus 188 rv~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~---------~~-~tiii~tH~~~~i~~~~dri~v~l~~G~ 257 (285)
T PRK14254 188 RLCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELA---------EE-YTVVIVTHNMQQAARISDKTAVFLTGGE 257 (285)
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHh---------cC-CEEEEEeCCHHHHHhhcCEEEEEeeCCE
Confidence 9999999999999999999999999999999999999875 33 469999999999876 99975 579999
Q ss_pred EEEecChhHHhhccC
Q 048639 1110 VVEMGSHSTLVAESQ 1124 (1139)
Q Consensus 1110 ive~G~~~eLl~~~~ 1124 (1139)
|++.|+++++.+++.
T Consensus 258 i~~~g~~~~~~~~~~ 272 (285)
T PRK14254 258 LVEFDDTDKIFENPE 272 (285)
T ss_pred EEEeCCHHHHHhCcC
Confidence 999999999986543
No 356
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.1e-41 Score=362.79 Aligned_cols=209 Identities=33% Similarity=0.513 Sum_probs=174.0
Q ss_pred EEEEeEEEECCCCC-CCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcce
Q 048639 257 IDIRDVCFAYPSRP-DQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNI 335 (1139)
Q Consensus 257 i~~~~v~~~y~~~~-~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 335 (1139)
|+++|++++|++.. .+++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. +++.+
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-----~~~~i 75 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTG-----PGPDR 75 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcc-----ccCcE
Confidence 46899999997421 1469999999999999999999999999999999999999999999999998753 35789
Q ss_pred EEEecCCCCCc-ccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHcc
Q 048639 336 GAVSQEPSLFT-GSLMDNIKVGNM--DADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVK 412 (1139)
Q Consensus 336 ~~v~Q~~~l~~-~ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~ 412 (1139)
+||+|++.+|+ .|++||+.++.. ....++. ...+.+.++.+ |++........+||||||||++|||||+.
T Consensus 76 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrl~la~al~~ 148 (220)
T cd03293 76 GYVFQQDALLPWLTVLDNVALGLELQGVPKAEA-----RERAEELLELV--GLSGFENAYPHQLSGGMRQRVALARALAV 148 (220)
T ss_pred EEEecccccccCCCHHHHHHHHHHHcCCCHHHH-----HHHHHHHHHHc--CChhhhhCCcccCCHHHHHHHHHHHHHHc
Confidence 99999999987 599999987531 1111111 11223445555 45555566778999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCCeEEEEecCccchhc-cCEEEEEe--CcEEEEecCh
Q 048639 413 NPPILLLDEATSALDSESEKLVQEALERAM--QGRTVILIAHRMSTIVN-ADMIAVVE--DGQVTETGTH 477 (1139)
Q Consensus 413 ~~~illlDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~~~~~~~-~d~i~~l~--~G~i~~~g~~ 477 (1139)
+|+++||||||++||+.++..+.+.|+++. .++|+|++||+++.+.. ||++++|+ +|++++.++.
T Consensus 149 ~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 149 DPDVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred CCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEEEe
Confidence 999999999999999999999999998863 37899999999998865 99999999 7999988764
No 357
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.6e-41 Score=367.71 Aligned_cols=220 Identities=28% Similarity=0.483 Sum_probs=183.4
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCC-----CccEEEECCccCCCCCHHH
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDP-----SNGDILIDSLNIKDLDLKS 330 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~-----~~G~i~~~g~~~~~~~~~~ 330 (1139)
.++++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++| ++|+|.++|.++...+...
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 79 (250)
T PRK14247 3 KIEIRDLKVSFGQ---VEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIE 79 (250)
T ss_pred eEEEEeeEEEECC---eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHH
Confidence 4899999999963 4599999999999999999999999999999999999974 6999999999998777778
Q ss_pred HhcceEEEecCCCCC-cccHHHHHhcCCCC----CCHHHHHHHHHHhcHHHHHHhCC--CCCCccccccCCCCChHHHHH
Q 048639 331 LRKNIGAVSQEPSLF-TGSLMDNIKVGNMD----ADDEQIYNASMMANAHSFISQLP--DQYSTELGQRGVQLSGGQKQR 403 (1139)
Q Consensus 331 ~~~~i~~v~Q~~~l~-~~ti~~ni~~g~~~----~~~~~~~~~~~~~~~~~~i~~l~--~g~~t~i~~~g~~LSgGqkqR 403 (1139)
+++.|+|++|++.++ ..|++||+.++... ....+.. ..+.+.++.+. +.........+.+||||||||
T Consensus 80 ~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~l~~~~~~~~~~~~~~LSgG~~qr 154 (250)
T PRK14247 80 LRRRVQMVFQIPNPIPNLSIFENVALGLKLNRLVKSKKELQ-----ERVRWALEKAQLWDEVKDRLDAPAGKLSGGQQQR 154 (250)
T ss_pred HhccEEEEeccCccCCCCcHHHHHHHHHHhccccCCHHHHH-----HHHHHHHHHcCCCcchhhhhcCCcccCCHHHHHH
Confidence 889999999999765 56999999875321 0111111 11223344331 111233466778999999999
Q ss_pred HHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhc
Q 048639 404 IAIARAIVKNPPILLLDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQ 482 (1139)
Q Consensus 404 i~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 482 (1139)
++|||||+++|+++||||||++||+.++..+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++.+
T Consensus 155 v~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 234 (250)
T PRK14247 155 LCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKKDMTIVLVTHFPQQAARISDYVAFLYKGQIVEWGPTREVFT 234 (250)
T ss_pred HHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCeEEEECCHHHHHc
Confidence 99999999999999999999999999999999999988778999999999999865 99999999999999999998864
Q ss_pred c
Q 048639 483 T 483 (1139)
Q Consensus 483 ~ 483 (1139)
.
T Consensus 235 ~ 235 (250)
T PRK14247 235 N 235 (250)
T ss_pred C
Confidence 3
No 358
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-40 Score=368.49 Aligned_cols=222 Identities=30% Similarity=0.487 Sum_probs=188.4
Q ss_pred ccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccC-----CccEEEECCcccCC--CC
Q 048639 884 GRIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDP-----NEGIILIDGKGIKE--YN 956 (1139)
Q Consensus 884 g~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~~--~~ 956 (1139)
+.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.+||.++.. .+
T Consensus 6 ~~l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 82 (259)
T PRK14260 6 PAIKVKDLSFYYNT---SKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRIN 82 (259)
T ss_pred ceEEEEEEEEEECC---eEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccc
Confidence 36999999999963 3599999999999999999999999999999999999985 48999999999864 44
Q ss_pred hHHHhhhceEEccccccccccHHHHhccCC------CcCC-HHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHH
Q 048639 957 LRRLRSQIGLVQQEPLLFSCSIRNNICYGN------EAAS-EAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQ 1029 (1139)
Q Consensus 957 l~~lR~~i~~V~Qdp~LF~gTIreNL~~~~------~~~s-d~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQ 1029 (1139)
...+|++++|+||+|.+|+.|+++|+.++. +... ++.+.++++.+++++++... + ...+..|||||
T Consensus 83 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~---~----~~~~~~LS~G~ 155 (259)
T PRK14260 83 INRLRRQIGMVFQRPNPFPMSIYENVAYGVRISAKLPQADLDEIVESALKGAALWQEVKDK---L----NKSALGLSGGQ 155 (259)
T ss_pred hHhhhhheEEEecccccCCccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchhhhH---h----cCCcccCCHHH
Confidence 567888999999999999999999997642 1111 24467788888886554322 2 33456799999
Q ss_pred HHHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEe--
Q 048639 1030 KQRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMD-- 1106 (1139)
Q Consensus 1030 rQrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~-- 1106 (1139)
|||+||||||+++|++|||||||++||+.+...+.+.|++.. .+ +|+|++||+++.+.. ||++++|+
T Consensus 156 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~---------~~-~tiii~tH~~~~i~~~~d~i~~l~~~ 225 (259)
T PRK14260 156 QQRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLR---------SE-LTIAIVTHNMQQATRVSDFTAFFSTD 225 (259)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHh---------cC-CEEEEEeCCHHHHHHhcCeEEEEecc
Confidence 999999999999999999999999999999999999999764 33 469999999999976 99999998
Q ss_pred ---CCEEEEecChhHHhhccCC
Q 048639 1107 ---KGEVVEMGSHSTLVAESQG 1125 (1139)
Q Consensus 1107 ---~G~ive~G~~~eLl~~~~g 1125 (1139)
+|++++.|+++++.+++..
T Consensus 226 ~~~~G~i~~~~~~~~~~~~~~~ 247 (259)
T PRK14260 226 ESRIGQMVEFGVTTQIFSNPLD 247 (259)
T ss_pred CCCCceEEEeCCHHHHhcCCCC
Confidence 5999999999999865443
No 359
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.9e-41 Score=369.99 Aligned_cols=215 Identities=28% Similarity=0.466 Sum_probs=188.7
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhc
Q 048639 885 RIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQI 964 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i 964 (1139)
.|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+...+++++
T Consensus 7 ~l~i~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 83 (265)
T PRK10253 7 RLRGEQLTLGYGK---YTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVARRI 83 (265)
T ss_pred EEEEEEEEEEECC---EEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEEhhhCCHHHHhhhe
Confidence 5999999999963 3699999999999999999999999999999999999999999999999999888888888999
Q ss_pred eEEcccccccc-ccHHHHhccCC-C---------cCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHH
Q 048639 965 GLVQQEPLLFS-CSIRNNICYGN-E---------AASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRI 1033 (1139)
Q Consensus 965 ~~V~Qdp~LF~-gTIreNL~~~~-~---------~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl 1033 (1139)
+|+||++.+|. .|+++|+.++. + ...+++++++++..++.++..+ ....||||||||+
T Consensus 84 ~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~Gq~qrv 152 (265)
T PRK10253 84 GLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHLADQ-----------SVDTLSGGQRQRA 152 (265)
T ss_pred EEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcC-----------CcccCChHHHHHH
Confidence 99999998875 69999998642 1 1123467888888888765433 2357999999999
Q ss_pred HHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEEE
Q 048639 1034 AIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVVE 1112 (1139)
Q Consensus 1034 alARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ive 1112 (1139)
+||||++++|++|||||||++||+.+...+.+.|+++.. ..++|+|+++|+++.+.. ||+|++|++|++++
T Consensus 153 ~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~--------~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~ 224 (265)
T PRK10253 153 WIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNR--------EKGYTLAAVLHDLNQACRYASHLIALREGKIVA 224 (265)
T ss_pred HHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHH--------hcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE
Confidence 999999999999999999999999999999999987641 124569999999998876 99999999999999
Q ss_pred ecChhHHhh
Q 048639 1113 MGSHSTLVA 1121 (1139)
Q Consensus 1113 ~G~~~eLl~ 1121 (1139)
.|+++++..
T Consensus 225 ~g~~~~~~~ 233 (265)
T PRK10253 225 QGAPKEIVT 233 (265)
T ss_pred eCCHHHHhh
Confidence 999999875
No 360
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-40 Score=368.25 Aligned_cols=221 Identities=30% Similarity=0.495 Sum_probs=185.7
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcce
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNI 335 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 335 (1139)
.++++|++++|++. .+++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++++
T Consensus 7 ~l~i~~l~~~~~~~-~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 85 (269)
T PRK13648 7 IIVFKNVSFQYQSD-ASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKHI 85 (269)
T ss_pred eEEEEEEEEEcCCC-CCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhe
Confidence 58999999999743 24699999999999999999999999999999999999999999999999999887777888899
Q ss_pred EEEecCCC-CC-cccHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHc
Q 048639 336 GAVSQEPS-LF-TGSLMDNIKVGNMD--ADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIV 411 (1139)
Q Consensus 336 ~~v~Q~~~-l~-~~ti~~ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~ 411 (1139)
+|++|+|. +| ..|+++|+.++... ...++..+ .+.+.++.+ |+.......+.+||||||||++||||++
T Consensus 86 ~~v~q~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~laral~ 158 (269)
T PRK13648 86 GIVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMHR-----RVSEALKQV--DMLERADYEPNALSGGQKQRVAIAGVLA 158 (269)
T ss_pred eEEEeChHHhcccccHHHHHHhhHHhcCCCHHHHHH-----HHHHHHHHc--CCchhhhCCcccCCHHHHHHHHHHHHHH
Confidence 99999995 44 56899999886321 12222211 122233433 3333455677899999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CCeEEEEecCccchhccCEEEEEeCcEEEEecChhhhhccc
Q 048639 412 KNPPILLLDEATSALDSESEKLVQEALERAMQ--GRTVILIAHRMSTIVNADMIAVVEDGQVTETGTHHSLLQTS 484 (1139)
Q Consensus 412 ~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~ 484 (1139)
.+|+++||||||++||+.+.+.+.+.++++.+ ++|+|++||+++.+..||+|++|++|++++.|+++++....
T Consensus 159 ~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~ 233 (269)
T PRK13648 159 LNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEAMEADHVIVMNKGTVYKEGTPTEIFDHA 233 (269)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchHHhcCCEEEEEECCEEEEecCHHHHhcCH
Confidence 99999999999999999999999999988743 78999999999998779999999999999999999886543
No 361
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=1.1e-40 Score=358.89 Aligned_cols=211 Identities=31% Similarity=0.486 Sum_probs=186.7
Q ss_pred EEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCCh----HHHhh
Q 048639 887 EFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNL----RRLRS 962 (1139)
Q Consensus 887 ~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l----~~lR~ 962 (1139)
.+.|+.|+|+.+ .++|+|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.+||.++...+. ...|+
T Consensus 2 ~~~~~~~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 79 (218)
T cd03290 2 QVTNGYFSWGSG--LATLSNINIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQTLEGKVHWSNKNESEPSFEATRSRNRY 79 (218)
T ss_pred eeeeeEEecCCC--CcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCcccccccccccchhhcc
Confidence 578999999743 469999999999999999999999999999999999999999999999998876542 34567
Q ss_pred hceEEccccccccccHHHHhccCCCcCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhcCC
Q 048639 963 QIGLVQQEPLLFSCSIRNNICYGNEAASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIARTLLKR 1042 (1139)
Q Consensus 963 ~i~~V~Qdp~LF~gTIreNL~~~~~~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalARALlr~ 1042 (1139)
.++|++|+|.+|+.|+++|+.++.+ ..+++.+++++..++.+.+..+|.|+++.++....+||||||||++||||++++
T Consensus 80 ~i~~~~q~~~~~~~t~~~nl~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~qrv~laral~~~ 158 (218)
T cd03290 80 SVAYAAQKPWLLNATVEENITFGSP-FNKQRYKAVTDACSLQPDIDLLPFGDQTEIGERGINLSGGQRQRICVARALYQN 158 (218)
T ss_pred eEEEEcCCCccccccHHHHHhhcCc-CCHHHHHHHHHHhCcHHHHHhCcCccccCcccCCCcCCHHHHHHHHHHHHHhhC
Confidence 8999999999999999999998643 456677888999999999999999999999988899999999999999999999
Q ss_pred CCEEEeeccccCCCHHHHHHHHH--HHHhhCCCCCCccccCCCeEEEEEecCchhhhcCCEEEEEeCCE
Q 048639 1043 PAIMLLDEATSALDAESERVIVS--ALEALNPKSSSCGELASRTTQITVAHRLATVINSDVIVVMDKGE 1109 (1139)
Q Consensus 1043 p~ILlLDEaTS~LD~~te~~I~~--~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~~DrI~vl~~G~ 1109 (1139)
|++|||||||++||+.+...+.+ .++... ..+.|+|++||+++.+..||+|++|++|+
T Consensus 159 p~illlDEPt~~LD~~~~~~l~~~~ll~~~~---------~~~~tii~~sH~~~~~~~~d~i~~l~~G~ 218 (218)
T cd03290 159 TNIVFLDDPFSALDIHLSDHLMQEGILKFLQ---------DDKRTLVLVTHKLQYLPHADWIIAMKDGS 218 (218)
T ss_pred CCEEEEeCCccccCHHHHHHHHHHHHHHHHh---------cCCCEEEEEeCChHHHhhCCEEEEecCCC
Confidence 99999999999999999998887 444432 23456999999999998899999999884
No 362
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=8.2e-41 Score=361.02 Aligned_cols=205 Identities=29% Similarity=0.464 Sum_probs=175.6
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChH---HHhh
Q 048639 886 IEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLR---RLRS 962 (1139)
Q Consensus 886 I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~---~lR~ 962 (1139)
|+++||+++|+. +.++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++..++.. .+|+
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 79 (222)
T PRK10908 2 IRFEHVSKAYLG--GRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIWFSGHDITRLKNREVPFLRR 79 (222)
T ss_pred EEEEeeEEEecC--CCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCChhHHHHHHh
Confidence 789999999952 24699999999999999999999999999999999999999999999999999877654 3688
Q ss_pred hceEEcccccc-ccccHHHHhccCC--CcCC----HHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHH
Q 048639 963 QIGLVQQEPLL-FSCSIRNNICYGN--EAAS----EAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAI 1035 (1139)
Q Consensus 963 ~i~~V~Qdp~L-F~gTIreNL~~~~--~~~s----d~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlal 1035 (1139)
+++|+||+|.+ +..|+++|+.++. ...+ ++++.++++..++.+...+. ..+||||||||++|
T Consensus 80 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrv~l 148 (222)
T PRK10908 80 QIGMIFQDHHLLMDRTVYDNVAIPLIIAGASGDDIRRRVSAALDKVGLLDKAKNF-----------PIQLSGGEQQRVGI 148 (222)
T ss_pred heEEEecCccccccccHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCC-----------chhCCHHHHHHHHH
Confidence 99999999987 4679999998642 1122 23466778888877655433 35799999999999
Q ss_pred HHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEEE
Q 048639 1036 ARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVVE 1112 (1139)
Q Consensus 1036 ARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ive 1112 (1139)
|||++++|++|||||||++||+.+.+.+.+.|++.. .+++|+|+|||+++.+.. ||+|++|++|+++.
T Consensus 149 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~---------~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~ 217 (222)
T PRK10908 149 ARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFN---------RVGVTVLMATHDIGLISRRSYRMLTLSDGHLHG 217 (222)
T ss_pred HHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHH---------HCCCEEEEEeCCHHHHHHhCCEEEEEECCEEcc
Confidence 999999999999999999999999999999999764 334569999999999987 89999999999864
No 363
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=4.5e-41 Score=365.27 Aligned_cols=212 Identities=29% Similarity=0.494 Sum_probs=179.1
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHH-Hhcce
Q 048639 257 IDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKS-LRKNI 335 (1139)
Q Consensus 257 i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~-~~~~i 335 (1139)
|+++|+++.|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... .++.+
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (230)
T TIGR03410 1 LEVSNLNVYYGQ---SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAGI 77 (230)
T ss_pred CEEEeEEEEeCC---eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhCe
Confidence 478999999973 46999999999999999999999999999999999999999999999999988776544 46789
Q ss_pred EEEecCCCCCcc-cHHHHHhcCCCCC--CHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHcc
Q 048639 336 GAVSQEPSLFTG-SLMDNIKVGNMDA--DDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVK 412 (1139)
Q Consensus 336 ~~v~Q~~~l~~~-ti~~ni~~g~~~~--~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~ 412 (1139)
+|++|++.+|+. |++||+.++.... ..++. ..+.++.+ +++.........+||||||||++|||||++
T Consensus 78 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~--------~~~~l~~~-~~l~~~~~~~~~~LS~G~~qrv~la~al~~ 148 (230)
T TIGR03410 78 AYVPQGREIFPRLTVEENLLTGLAALPRRSRKI--------PDEIYELF-PVLKEMLGRRGGDLSGGQQQQLAIARALVT 148 (230)
T ss_pred EEeccCCcccCCCcHHHHHHHHHHhcCcchHHH--------HHHHHHHH-HhHHHHhhCChhhCCHHHHHHHHHHHHHhc
Confidence 999999999976 9999998763221 11111 11222222 112334566778999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhh
Q 048639 413 NPPILLLDEATSALDSESEKLVQEALERAMQ--GRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSL 480 (1139)
Q Consensus 413 ~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l 480 (1139)
+|+++||||||++||+.+...+.+.|.++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 149 ~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~~~~~ 219 (230)
T TIGR03410 149 RPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLDFARELADRYYVMERGRVVASGAGDEL 219 (230)
T ss_pred CCCEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHc
Confidence 9999999999999999999999999988753 7899999999999986 999999999999999999887
No 364
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.8e-41 Score=365.53 Aligned_cols=217 Identities=28% Similarity=0.473 Sum_probs=185.4
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHH-Hhcc
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKS-LRKN 334 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~-~~~~ 334 (1139)
.++++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... .++.
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (241)
T PRK10895 3 TLTAKNLAKAYKG---RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARRG 79 (241)
T ss_pred eEEEeCcEEEeCC---EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHhC
Confidence 4889999999963 46999999999999999999999999999999999999999999999999987776544 5678
Q ss_pred eEEEecCCCCCcc-cHHHHHhcCCCC---CCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHH
Q 048639 335 IGAVSQEPSLFTG-SLMDNIKVGNMD---ADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAI 410 (1139)
Q Consensus 335 i~~v~Q~~~l~~~-ti~~ni~~g~~~---~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal 410 (1139)
++|++|++.++.. |++||+.++... .+.++ ....+.+.++.+ |++........+||||||||++||||+
T Consensus 80 i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~-----~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral 152 (241)
T PRK10895 80 IGYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQ-----REDRANELMEEF--HIEHLRDSMGQSLSGGERRRVEIARAL 152 (241)
T ss_pred eEEeccCCcccccCcHHHHHhhhhhcccccCHHH-----HHHHHHHHHHHc--CCHHHhhcchhhCCHHHHHHHHHHHHH
Confidence 9999999998875 999999875311 11111 112234556665 555566778889999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhc
Q 048639 411 VKNPPILLLDEATSALDSESEKLVQEALERAM-QGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQ 482 (1139)
Q Consensus 411 ~~~~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 482 (1139)
+.+|++|||||||++||+.+...+.+.+..+. +++|+|++||+++.+.. ||++++|++|++++.|+++++..
T Consensus 153 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 226 (241)
T PRK10895 153 AANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQ 226 (241)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEeCCeEEeeCCHHHHhc
Confidence 99999999999999999999999999998765 48999999999988865 99999999999999999998864
No 365
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-40 Score=366.95 Aligned_cols=228 Identities=31% Similarity=0.456 Sum_probs=191.8
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccC-----CccEEEECCcccCCC--Ch
Q 048639 885 RIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDP-----NEGIILIDGKGIKEY--NL 957 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~~~--~l 957 (1139)
.|+++||+++|++ .++|+|+||+|++||.+||+|+||||||||+++|.|+.+| ++|+|.+||.++... +.
T Consensus 6 ~i~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 82 (253)
T PRK14261 6 ILSTKNLNLWYGE---KHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADV 82 (253)
T ss_pred eEEEeeeEEEECC---eeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccch
Confidence 4899999999963 3699999999999999999999999999999999999763 489999999999876 45
Q ss_pred HHHhhhceEEccccccccccHHHHhccCCC--c-----CCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHH
Q 048639 958 RRLRSQIGLVQQEPLLFSCSIRNNICYGNE--A-----ASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQK 1030 (1139)
Q Consensus 958 ~~lR~~i~~V~Qdp~LF~gTIreNL~~~~~--~-----~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQr 1030 (1139)
...|++++|+||+|.+|+.|+++|+.++.. . ..++++.++++.+++.+.+. +..+..+.+||||||
T Consensus 83 ~~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~G~~ 155 (253)
T PRK14261 83 VALRRKIGMVFQRPNPFPKSIYENVAYGPRIHGEKNKKTLDTIVEKSLKGAALWDEVK-------DRLHDSALSLSGGQQ 155 (253)
T ss_pred hhhhceEEEEecCCccCcccHHHHHHhhHHhcCCCCHHHHHHHHHHHHHHhcCchhhH-------HHhhcChhhCCHHHH
Confidence 677889999999999999999999987521 0 11335667777777654332 234455678999999
Q ss_pred HHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCE
Q 048639 1031 QRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGE 1109 (1139)
Q Consensus 1031 QrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ 1109 (1139)
||++||||++.+|++|||||||++||+.+.+.+.+.|++.. .+ +|+|++||+++.+.. ||+|++|++|+
T Consensus 156 qrv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~---------~~-~tvii~sh~~~~~~~~~d~v~~l~~G~ 225 (253)
T PRK14261 156 QRLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLK---------KE-YTVIIVTHNMQQAARVSDYTGFMYLGK 225 (253)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh---------hC-ceEEEEEcCHHHHHhhCCEEEEEECCE
Confidence 99999999999999999999999999999999999999764 33 569999999999975 99999999999
Q ss_pred EEEecChhHHhhccCChHHHHHH
Q 048639 1110 VVEMGSHSTLVAESQGVYSRLYQ 1132 (1139)
Q Consensus 1110 ive~G~~~eLl~~~~g~f~~l~~ 1132 (1139)
+++.|+++++..++...+.+.+.
T Consensus 226 i~~~g~~~~~~~~~~~~~~~~~~ 248 (253)
T PRK14261 226 LIEFDKTTQIFENPHEELTENYI 248 (253)
T ss_pred EEEcCCHHHHHhCCCcHHHHHHh
Confidence 99999999998665445555443
No 366
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-40 Score=366.04 Aligned_cols=224 Identities=33% Similarity=0.499 Sum_probs=191.4
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccc-----CCccEEEECCcccCC--CCh
Q 048639 885 RIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYD-----PNEGIILIDGKGIKE--YNL 957 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~-----p~~G~I~idG~di~~--~~l 957 (1139)
.|+++||+++|++ .++|+|+||+|++||.+||+|+||||||||+++|+|+.+ |++|+|.+||.++.. .+.
T Consensus 3 ~l~~~~v~~~~~~---~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~ 79 (250)
T PRK14266 3 RIEVENLNTYFDD---AHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDGVDIYDPAVDV 79 (250)
T ss_pred EEEEEeEEEEeCC---eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECCEEcccccccH
Confidence 3789999999963 469999999999999999999999999999999999975 389999999999875 345
Q ss_pred HHHhhhceEEccccccccccHHHHhccCCC--cC-----CHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHH
Q 048639 958 RRLRSQIGLVQQEPLLFSCSIRNNICYGNE--AA-----SEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQK 1030 (1139)
Q Consensus 958 ~~lR~~i~~V~Qdp~LF~gTIreNL~~~~~--~~-----sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQr 1030 (1139)
..+|++++|+||+|.+|.+|+++|+.++.. .. .++++.++++.+++.+++..+ + ...+..||+|||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~---~----~~~~~~LS~Gq~ 152 (250)
T PRK14266 80 VELRKKVGMVFQKPNPFPKSIFDNVAYGLRIHGEDDEDFIEERVEESLKAAALWDEVKDK---L----DKSALGLSGGQQ 152 (250)
T ss_pred HHHhhheEEEecCCccCcchHHHHHHhHHhhcCCCCHHHHHHHHHHHHHHcCCchhHHHH---H----hCCcccCCHHHH
Confidence 678999999999999999999999986421 11 224567788888987765432 2 344568999999
Q ss_pred HHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCE
Q 048639 1031 QRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGE 1109 (1139)
Q Consensus 1031 QrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ 1109 (1139)
||+||||||+++|+||||||||++||+.+...+.+.|++.. . ++|+|++||+++.+.. ||+|++|++|+
T Consensus 153 qrv~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~---------~-~~tiii~sh~~~~~~~~~~~i~~l~~G~ 222 (250)
T PRK14266 153 QRLCIARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLK---------E-DYTIVIVTHNMQQATRVSKYTSFFLNGE 222 (250)
T ss_pred HHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHh---------c-CCeEEEEECCHHHHHhhcCEEEEEECCe
Confidence 99999999999999999999999999999999999999764 3 3469999999999887 89999999999
Q ss_pred EEEecChhHHhhccCChHH
Q 048639 1110 VVEMGSHSTLVAESQGVYS 1128 (1139)
Q Consensus 1110 ive~G~~~eLl~~~~g~f~ 1128 (1139)
+++.|+++++...+.+.|.
T Consensus 223 i~~~g~~~~~~~~~~~~~~ 241 (250)
T PRK14266 223 IIESGLTDQIFINPKDKRT 241 (250)
T ss_pred EEEeCCHHHHHhCCCChHH
Confidence 9999999999876556554
No 367
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-40 Score=365.61 Aligned_cols=219 Identities=31% Similarity=0.499 Sum_probs=187.1
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCC-----ccEEEECCcccCCC--Ch
Q 048639 885 RIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPN-----EGIILIDGKGIKEY--NL 957 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~-----~G~I~idG~di~~~--~l 957 (1139)
.|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|+ +|+|.+||.++... +.
T Consensus 4 ~l~~~~l~~~~~~---~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~ 80 (251)
T PRK14249 4 KIKIRGVNFFYHK---HQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDV 80 (251)
T ss_pred eEEEEEEEEEECC---eeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccCh
Confidence 5899999999963 35999999999999999999999999999999999999987 69999999998643 45
Q ss_pred HHHhhhceEEccccccccccHHHHhccCCC--c-C----CHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHH
Q 048639 958 RRLRSQIGLVQQEPLLFSCSIRNNICYGNE--A-A----SEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQK 1030 (1139)
Q Consensus 958 ~~lR~~i~~V~Qdp~LF~gTIreNL~~~~~--~-~----sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQr 1030 (1139)
..+|+.++||||+|.+|+.|+++|+.++.. . . .++.+.++++.+++++.+.. .....+.+||||||
T Consensus 81 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LS~Gq~ 153 (251)
T PRK14249 81 VNLRKRVGMVFQQPNPFPKSIFDNVAFGPRMLGTTAQSRLDEVVEKSLRQAALWDEVKD-------NLHKSGLALSGGQQ 153 (251)
T ss_pred HHhhceEEEEecCCccCcCcHHHHHhhHHHhcCCChhhHHHHHHHHHHHHhCCchhhhh-------HhhCCcccCCHHHH
Confidence 678899999999999999999999986421 1 1 12345666777777654432 23445678999999
Q ss_pred HHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCE
Q 048639 1031 QRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGE 1109 (1139)
Q Consensus 1031 QrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ 1109 (1139)
||++|||||+++|++|||||||++||+.+...+.+.|++.. . ++|||++||+++.+.+ ||+|++|++|+
T Consensus 154 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~---------~-~~tilivsh~~~~~~~~~d~i~~l~~G~ 223 (251)
T PRK14249 154 QRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELK---------Q-NYTIAIVTHNMQQAARASDWTGFLLTGD 223 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh---------c-CCEEEEEeCCHHHHHhhCCEEEEEeCCe
Confidence 99999999999999999999999999999999999998753 2 3469999999999987 89999999999
Q ss_pred EEEecChhHHhhcc
Q 048639 1110 VVEMGSHSTLVAES 1123 (1139)
Q Consensus 1110 ive~G~~~eLl~~~ 1123 (1139)
+++.|+++++...+
T Consensus 224 i~~~~~~~~~~~~~ 237 (251)
T PRK14249 224 LVEYGRTGEIFSRP 237 (251)
T ss_pred EEEeCCHHHHHhCC
Confidence 99999999997653
No 368
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=8.4e-41 Score=381.20 Aligned_cols=205 Identities=25% Similarity=0.406 Sum_probs=172.9
Q ss_pred CccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCc----cCCCCCHHHH---h-cceEEEecCCC
Q 048639 272 QLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSL----NIKDLDLKSL---R-KNIGAVSQEPS 343 (1139)
Q Consensus 272 ~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~----~~~~~~~~~~---~-~~i~~v~Q~~~ 343 (1139)
..+|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|. ++...+...+ | ++|+||+|++.
T Consensus 37 ~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~~~ 116 (382)
T TIGR03415 37 VVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVFQKFA 116 (382)
T ss_pred EEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEECCCc
Confidence 45899999999999999999999999999999999999999999999996 5666655443 3 58999999999
Q ss_pred CCc-ccHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHccCCCEEEEe
Q 048639 344 LFT-GSLMDNIKVGNMD--ADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVKNPPILLLD 420 (1139)
Q Consensus 344 l~~-~ti~~ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~~~~illlD 420 (1139)
+|+ .|++||+.++... ...++. ...+.+.++.+ |++......+.+||||||||++|||||+.+|+|||||
T Consensus 117 l~p~~Tv~eNi~~~~~~~g~~~~~~-----~~~a~e~le~v--gL~~~~~~~~~~LSgGq~QRV~LARALa~~P~ILLlD 189 (382)
T TIGR03415 117 LMPWLTVEENVAFGLEMQGMPEAER-----RKRVDEQLELV--GLAQWADKKPGELSGGMQQRVGLARAFAMDADILLMD 189 (382)
T ss_pred CCCCCcHHHHHHHHHHhcCCCHHHH-----HHHHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEE
Confidence 997 6999999987421 112211 11223445554 4555556677899999999999999999999999999
Q ss_pred CCCCCCCHHhHHHHHHHHHHHcC--CCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhcc
Q 048639 421 EATSALDSESEKLVQEALERAMQ--GRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQT 483 (1139)
Q Consensus 421 Epts~LD~~~~~~i~~~l~~~~~--~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 483 (1139)
||||+||+.++..+++.+.++.+ ++|+|+|||+++.+.. ||+|++|++|++++.|++++++.+
T Consensus 190 EPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e~~~l~DrI~vl~~G~iv~~g~~~ei~~~ 255 (382)
T TIGR03415 190 EPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQHGTPEEIVLN 255 (382)
T ss_pred CCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhhC
Confidence 99999999999999999988753 7999999999999865 999999999999999999999754
No 369
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-40 Score=369.20 Aligned_cols=218 Identities=33% Similarity=0.528 Sum_probs=182.4
Q ss_pred ccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccC-----CCccEEEECCccCCC--CC
Q 048639 255 GNIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYD-----PSNGDILIDSLNIKD--LD 327 (1139)
Q Consensus 255 ~~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~-----~~~G~i~~~g~~~~~--~~ 327 (1139)
..|+++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|.++.. .+
T Consensus 12 ~~l~i~nl~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~~ 88 (269)
T PRK14259 12 IIISLQNVTISYGT---FEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRVD 88 (269)
T ss_pred ceEEEEeEEEEECC---EEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccCC
Confidence 46999999999963 459999999999999999999999999999999999987 699999999998853 45
Q ss_pred HHHHhcceEEEecCCCCCcccHHHHHhcCCCC--CCH---HHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHH
Q 048639 328 LKSLRKNIGAVSQEPSLFTGSLMDNIKVGNMD--ADD---EQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQ 402 (1139)
Q Consensus 328 ~~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~--~~~---~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkq 402 (1139)
...+|+.++|++|++.+|..|++||+.++... ... +++.++++..+ +..++.......+.+|||||||
T Consensus 89 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~-------l~~~l~~~~~~~~~~LS~G~~q 161 (269)
T PRK14259 89 PVEVRRRIGMVFQQPNPFPKSIYENIAFGARINGYTGDMDELVERSLRKAA-------VWDECKDKLNESGYSLSGGQQQ 161 (269)
T ss_pred HHHHhhceEEEccCCccchhhHHHHHhhhhhhcCCcHHHHHHHHHHHHHhC-------CcchhhhhhCCCcccCCHHHHH
Confidence 66778899999999999988999999986421 111 11122222111 1122334456778899999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhc-cCEEEEEeC-----------cE
Q 048639 403 RIAIARAIVKNPPILLLDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVN-ADMIAVVED-----------GQ 470 (1139)
Q Consensus 403 Ri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~~-----------G~ 470 (1139)
|++|||||+.+|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||++++|++ |+
T Consensus 162 rl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~~~~~~~~~g~~g~ 241 (269)
T PRK14259 162 RLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKKNFTIVIVTHNMQQAVRVSDMTAFFNAEEVEGGSGGKVGY 241 (269)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeccccccccccccce
Confidence 999999999999999999999999999999999999988778999999999999865 999999996 67
Q ss_pred EEEecChhhhhc
Q 048639 471 VTETGTHHSLLQ 482 (1139)
Q Consensus 471 i~~~g~~~~l~~ 482 (1139)
+++.|+++++..
T Consensus 242 ~~~~~~~~~~~~ 253 (269)
T PRK14259 242 LVEFNETKKIFN 253 (269)
T ss_pred EEEeCCHHHHHh
Confidence 899999998864
No 370
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-40 Score=368.18 Aligned_cols=219 Identities=32% Similarity=0.516 Sum_probs=182.3
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccC--C---CccEEEECCccCCC--CCH
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYD--P---SNGDILIDSLNIKD--LDL 328 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~--~---~~G~i~~~g~~~~~--~~~ 328 (1139)
.|+++|+++.|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++ | ++|+|.++|+++.. .+.
T Consensus 12 ~l~i~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~ 88 (259)
T PRK14274 12 VYQINGMNLWYGQ---HHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDL 88 (259)
T ss_pred eEEEeeEEEEECC---eeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCH
Confidence 5899999999963 459999999999999999999999999999999999997 3 69999999998853 345
Q ss_pred HHHhcceEEEecCCCCCcccHHHHHhcCCCC---CCHHHHHHHHHHhcHHHHHHhC--CCCCCccccccCCCCChHHHHH
Q 048639 329 KSLRKNIGAVSQEPSLFTGSLMDNIKVGNMD---ADDEQIYNASMMANAHSFISQL--PDQYSTELGQRGVQLSGGQKQR 403 (1139)
Q Consensus 329 ~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~---~~~~~~~~~~~~~~~~~~i~~l--~~g~~t~i~~~g~~LSgGqkqR 403 (1139)
..+++.++|++|++.+|+.|++||+.++... ...++..+ .+.+.++.+ .+.+.......+.+||||||||
T Consensus 89 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~l~~~~~~LS~Gq~qr 163 (259)
T PRK14274 89 VELRKNIGMVFQKGNPFPQSIFDNVAYGPRIHGTKNKKKLQE-----IVEKSLKDVALWDEVKDRLHTQALSLSGGQQQR 163 (259)
T ss_pred HHHhhceEEEecCCcccccCHHHHHHhHHHhcCCCCHHHHHH-----HHHHHHHHcCCchhhhhhhhCCcccCCHHHHHH
Confidence 5678899999999999989999999875321 11222111 111223332 1111234567788999999999
Q ss_pred HHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhc
Q 048639 404 IAIARAIVKNPPILLLDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQ 482 (1139)
Q Consensus 404 i~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 482 (1139)
++|||||+.+|+++||||||++||+.++..+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++..
T Consensus 164 v~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 243 (259)
T PRK14274 164 LCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKEKYTIVIVTHNMQQAARVSDQTAFFYMGELVECNDTNKMFS 243 (259)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEECCHHHHhh
Confidence 99999999999999999999999999999999999988778999999999999875 99999999999999999998864
No 371
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-40 Score=367.58 Aligned_cols=221 Identities=31% Similarity=0.470 Sum_probs=188.5
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccc-----CCccEEEECCcccCC--CCh
Q 048639 885 RIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYD-----PNEGIILIDGKGIKE--YNL 957 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~-----p~~G~I~idG~di~~--~~l 957 (1139)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|++. |++|+|.+||.++.. .+.
T Consensus 10 ~l~i~~v~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 86 (264)
T PRK14243 10 VLRTENLNVYYGS---FLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAPDVDP 86 (264)
T ss_pred EEEEeeeEEEECC---EEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEccccccCh
Confidence 4899999999963 369999999999999999999999999999999999986 379999999998853 455
Q ss_pred HHHhhhceEEccccccccccHHHHhccCCCc-----CCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHH
Q 048639 958 RRLRSQIGLVQQEPLLFSCSIRNNICYGNEA-----ASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQR 1032 (1139)
Q Consensus 958 ~~lR~~i~~V~Qdp~LF~gTIreNL~~~~~~-----~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQr 1032 (1139)
..+|++++|+||++.+|+.|+++|+.++... ..++++.++++.+++.+++.. .....+.+||||||||
T Consensus 87 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LSgGq~qr 159 (264)
T PRK14243 87 VEVRRRIGMVFQKPNPFPKSIYDNIAYGARINGYKGDMDELVERSLRQAALWDEVKD-------KLKQSGLSLSGGQQQR 159 (264)
T ss_pred HHHhhhEEEEccCCccccccHHHHHHhhhhhcCcchHHHHHHHHHHHHhCchhhHHH-------HhcCCcccCCHHHHHH
Confidence 6788999999999999989999999875321 123456677888888765532 1234456899999999
Q ss_pred HHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEe-----
Q 048639 1033 IAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMD----- 1106 (1139)
Q Consensus 1033 lalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~----- 1106 (1139)
++|||||+++|+||||||||++||+.+...+.+.|++.. .+ +|||++||+++.+.. ||||++|+
T Consensus 160 v~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~---------~~-~tvi~vtH~~~~~~~~~d~v~~l~~~~~~ 229 (264)
T PRK14243 160 LCIARAIAVQPEVILMDEPCSALDPISTLRIEELMHELK---------EQ-YTIIIVTHNMQQAARVSDMTAFFNVELTE 229 (264)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh---------cC-CEEEEEecCHHHHHHhCCEEEEEeccccc
Confidence 999999999999999999999999999999999999764 33 469999999999876 99999998
Q ss_pred ----CCEEEEecChhHHhhccCC
Q 048639 1107 ----KGEVVEMGSHSTLVAESQG 1125 (1139)
Q Consensus 1107 ----~G~ive~G~~~eLl~~~~g 1125 (1139)
+|++++.|+++++.+++..
T Consensus 230 ~~~~~g~i~~~~~~~~~~~~~~~ 252 (264)
T PRK14243 230 GGGRYGYLVEFDRTEKIFNSPQQ 252 (264)
T ss_pred ccccCceEEEeCCHHHHHhCCCc
Confidence 8999999999999865443
No 372
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-40 Score=367.29 Aligned_cols=224 Identities=26% Similarity=0.468 Sum_probs=186.7
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcceE
Q 048639 257 IDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNIG 336 (1139)
Q Consensus 257 i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 336 (1139)
++++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++
T Consensus 3 l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (255)
T PRK11231 3 LRTENLTVGYGT---KRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLARRLA 79 (255)
T ss_pred EEEEeEEEEECC---EEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhhheE
Confidence 789999999963 46999999999999999999999999999999999999999999999999988777777788899
Q ss_pred EEecCCCCCcc-cHHHHHhcCCCCC------CHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHH
Q 048639 337 AVSQEPSLFTG-SLMDNIKVGNMDA------DDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARA 409 (1139)
Q Consensus 337 ~v~Q~~~l~~~-ti~~ni~~g~~~~------~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARa 409 (1139)
|++|++.++.+ |++||+.++.... ..++. ...+.+.++.+ |++......+..||||||||++||||
T Consensus 80 ~~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~lara 152 (255)
T PRK11231 80 LLPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAED-----NARVNQAMEQT--RINHLADRRLTDLSGGQRQRAFLAMV 152 (255)
T ss_pred EecccCCCCCCccHHHHHHhccchhhhhccCCCHHH-----HHHHHHHHHHc--CCHHHHcCCcccCCHHHHHHHHHHHH
Confidence 99999998876 9999999863210 00110 11112233333 33344556778999999999999999
Q ss_pred HccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhccchHH
Q 048639 410 IVKNPPILLLDEATSALDSESEKLVQEALERAM-QGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQTSDFY 487 (1139)
Q Consensus 410 l~~~~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~~ 487 (1139)
++.+|++|||||||++||+.+...+.+.|+++. +++|+|++||+++.+.. ||++++|++|+++..|+++++... ..+
T Consensus 153 l~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~-~~~ 231 (255)
T PRK11231 153 LAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLNQASRYCDHLVVLANGHVMAQGTPEEVMTP-GLL 231 (255)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECCeEEEEcCHHHhcCH-HHH
Confidence 999999999999999999999999999998865 48999999999999875 999999999999999999988653 344
Q ss_pred HHHH
Q 048639 488 NRLF 491 (1139)
Q Consensus 488 ~~~~ 491 (1139)
.+.+
T Consensus 232 ~~~~ 235 (255)
T PRK11231 232 RTVF 235 (255)
T ss_pred HHHh
Confidence 5554
No 373
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=7.2e-41 Score=379.76 Aligned_cols=214 Identities=29% Similarity=0.463 Sum_probs=183.5
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhc
Q 048639 885 RIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQI 964 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i 964 (1139)
.|+++||+++|++ ..+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+ ...|+++
T Consensus 41 ~i~i~nl~k~y~~---~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~-~~~~~~i 116 (340)
T PRK13536 41 AIDLAGVSKSYGD---KAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARA-RLARARI 116 (340)
T ss_pred eEEEEEEEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcch-HHHhccE
Confidence 4999999999963 46999999999999999999999999999999999999999999999999997654 5678999
Q ss_pred eEEccccccc-cccHHHHhccCCC--cCCH----HHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHH
Q 048639 965 GLVQQEPLLF-SCSIRNNICYGNE--AASE----AEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIAR 1037 (1139)
Q Consensus 965 ~~V~Qdp~LF-~gTIreNL~~~~~--~~sd----~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalAR 1037 (1139)
+|+||++.+| ..|++||+.+... ..+. +.+.++++.+++.+ ..++.+ .+||||||||++|||
T Consensus 117 g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~L~~-------~~~~~~----~~LS~G~kqrv~lA~ 185 (340)
T PRK13536 117 GVVPQFDNLDLEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLES-------KADARV----SDLSGGMKRRLTLAR 185 (340)
T ss_pred EEEeCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCch-------hhCCCh----hhCCHHHHHHHHHHH
Confidence 9999999886 5699999975321 1122 23445566666543 344444 469999999999999
Q ss_pred HhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEEEecCh
Q 048639 1038 TLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVVEMGSH 1116 (1139)
Q Consensus 1038 ALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~ 1116 (1139)
||+.+|++|||||||++||+.+...+++.|+++. ..++|||++||+++.+.. ||+|++|++|++++.|++
T Consensus 186 aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~---------~~g~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~ 256 (340)
T PRK13536 186 ALINDPQLLILDEPTTGLDPHARHLIWERLRSLL---------ARGKTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRP 256 (340)
T ss_pred HHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHH---------hCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCH
Confidence 9999999999999999999999999999999874 334569999999999976 999999999999999999
Q ss_pred hHHhhc
Q 048639 1117 STLVAE 1122 (1139)
Q Consensus 1117 ~eLl~~ 1122 (1139)
+++.++
T Consensus 257 ~~l~~~ 262 (340)
T PRK13536 257 HALIDE 262 (340)
T ss_pred HHHHhh
Confidence 999754
No 374
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=8.1e-41 Score=363.31 Aligned_cols=214 Identities=28% Similarity=0.430 Sum_probs=178.9
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHH-Hhhhc
Q 048639 886 IEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRR-LRSQI 964 (1139)
Q Consensus 886 I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~-lR~~i 964 (1139)
|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+... .++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (230)
T TIGR03410 1 LEVSNLNVYYGQ---SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAGI 77 (230)
T ss_pred CEEEeEEEEeCC---eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhCe
Confidence 578999999963 36999999999999999999999999999999999999999999999999998877654 46789
Q ss_pred eEEccccccccc-cHHHHhccCCCc--CCHH-HHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhc
Q 048639 965 GLVQQEPLLFSC-SIRNNICYGNEA--ASEA-EIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIARTLL 1040 (1139)
Q Consensus 965 ~~V~Qdp~LF~g-TIreNL~~~~~~--~sd~-ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalARALl 1040 (1139)
+|+||++.+|.. |+++|+.++... ..++ ...++++..+ +++.........||||||||++|||||+
T Consensus 78 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~l~~~~----------~l~~~~~~~~~~LS~G~~qrv~la~al~ 147 (230)
T TIGR03410 78 AYVPQGREIFPRLTVEENLLTGLAALPRRSRKIPDEIYELFP----------VLKEMLGRRGGDLSGGQQQQLAIARALV 147 (230)
T ss_pred EEeccCCcccCCCcHHHHHHHHHHhcCcchHHHHHHHHHHHH----------hHHHHhhCChhhCCHHHHHHHHHHHHHh
Confidence 999999999976 999999865321 1112 2233344432 1222233445679999999999999999
Q ss_pred CCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEEEecChhHH
Q 048639 1041 KRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVVEMGSHSTL 1119 (1139)
Q Consensus 1041 r~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eL 1119 (1139)
++|++|||||||++||+.+.+.+.+.|++... ..++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 148 ~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~--------~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~~~~~ 219 (230)
T TIGR03410 148 TRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRA--------EGGMAILLVEQYLDFARELADRYYVMERGRVVASGAGDEL 219 (230)
T ss_pred cCCCEEEecCCcccCCHHHHHHHHHHHHHHHH--------cCCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHc
Confidence 99999999999999999999999999997641 124569999999999986 999999999999999999998
Q ss_pred h
Q 048639 1120 V 1120 (1139)
Q Consensus 1120 l 1120 (1139)
.
T Consensus 220 ~ 220 (230)
T TIGR03410 220 D 220 (230)
T ss_pred C
Confidence 3
No 375
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-40 Score=364.67 Aligned_cols=205 Identities=32% Similarity=0.517 Sum_probs=175.3
Q ss_pred ccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcc
Q 048639 255 GNIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKN 334 (1139)
Q Consensus 255 ~~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~ 334 (1139)
..|+++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .+++.
T Consensus 11 ~~l~i~~l~~~~~~---~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~-----~~~~~ 82 (257)
T PRK11247 11 TPLLLNAVSKRYGE---RTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLA-----EARED 82 (257)
T ss_pred CcEEEEEEEEEECC---cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHH-----HhhCc
Confidence 35999999999963 46999999999999999999999999999999999999999999999997653 45778
Q ss_pred eEEEecCCCCCc-ccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHccC
Q 048639 335 IGAVSQEPSLFT-GSLMDNIKVGNMDADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVKN 413 (1139)
Q Consensus 335 i~~v~Q~~~l~~-~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~~ 413 (1139)
++|++|++.+++ .|++||+.++.....++++ .+.++.+ |+.......+.+||||||||++|||||+.+
T Consensus 83 i~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~---------~~~l~~~--gl~~~~~~~~~~LSgGqkqrl~laraL~~~ 151 (257)
T PRK11247 83 TRLMFQDARLLPWKKVIDNVGLGLKGQWRDAA---------LQALAAV--GLADRANEWPAALSGGQKQRVALARALIHR 151 (257)
T ss_pred eEEEecCccCCCCCcHHHHHHhcccchHHHHH---------HHHHHHc--CChhHhcCChhhCCHHHHHHHHHHHHHhcC
Confidence 999999999987 5999999986422111222 2334444 444455677889999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChh
Q 048639 414 PPILLLDEATSALDSESEKLVQEALERAM--QGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHH 478 (1139)
Q Consensus 414 ~~illlDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~ 478 (1139)
|+++||||||++||+.+...+.+.|+++. .++|+|+|||+++.+.. ||+|++|++|++++.|+.+
T Consensus 152 p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 219 (257)
T PRK11247 152 PGLLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVD 219 (257)
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecccc
Confidence 99999999999999999999999998863 37899999999999865 9999999999999888654
No 376
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=6.5e-41 Score=359.71 Aligned_cols=207 Identities=33% Similarity=0.568 Sum_probs=173.8
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcceE
Q 048639 257 IDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNIG 336 (1139)
Q Consensus 257 i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 336 (1139)
|+++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.. +++++
T Consensus 1 i~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~--~~~i~ 75 (213)
T cd03301 1 VELENVTKRFGN---VTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPK--DRDIA 75 (213)
T ss_pred CEEEeeEEEECC---eeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcc--cceEE
Confidence 478999999964 3699999999999999999999999999999999999999999999999998665432 46899
Q ss_pred EEecCCCCCc-ccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHccC
Q 048639 337 AVSQEPSLFT-GSLMDNIKVGNM--DADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVKN 413 (1139)
Q Consensus 337 ~v~Q~~~l~~-~ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~~ 413 (1139)
|++|++.++. .|++||+.++.. ....++..+ .+.+.++.+ |++......+.+||||||||++|||||+.+
T Consensus 76 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qr~~laral~~~ 148 (213)
T cd03301 76 MVFQNYALYPHMTVYDNIAFGLKLRKVPKDEIDE-----RVREVAELL--QIEHLLDRKPKQLSGGQRQRVALGRAIVRE 148 (213)
T ss_pred EEecChhhccCCCHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CCHHHHhCChhhCCHHHHHHHHHHHHHhcC
Confidence 9999999886 599999987532 112222111 122334444 445556677789999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCCeEEEEecCccchhc-cCEEEEEeCcEEEEec
Q 048639 414 PPILLLDEATSALDSESEKLVQEALERAM--QGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETG 475 (1139)
Q Consensus 414 ~~illlDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g 475 (1139)
|+++||||||++||+.+.+.+.+.|+++. .++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 149 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 149 PKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 99999999999999999999999998874 37999999999999876 9999999999998765
No 377
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=1.4e-40 Score=362.32 Aligned_cols=213 Identities=33% Similarity=0.530 Sum_probs=183.9
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhce
Q 048639 886 IEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQIG 965 (1139)
Q Consensus 886 I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~ 965 (1139)
|+++|++++|++ .++|+|+||+|.+||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .|+.++
T Consensus 1 i~i~~l~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~i~g~~~~~~~~--~~~~i~ 75 (237)
T TIGR00968 1 IEIANISKRFGS---FQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPDSGRIRLNGQDATRVHA--RDRKIG 75 (237)
T ss_pred CEEEEEEEEECC---eeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcCEE
Confidence 578999999963 369999999999999999999999999999999999999999999999999886553 478899
Q ss_pred EEccccccccc-cHHHHhccCCC--c----CCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 048639 966 LVQQEPLLFSC-SIRNNICYGNE--A----ASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIART 1038 (1139)
Q Consensus 966 ~V~Qdp~LF~g-TIreNL~~~~~--~----~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalARA 1038 (1139)
|+||+|.+|++ |+++|+.++.. . ..++++.++++..++.++.++. ..+||+||+||++||||
T Consensus 76 ~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~lS~G~~qrl~lara 144 (237)
T TIGR00968 76 FVFQHYALFKHLTVRDNIAFGLEIRKHPKAKIKARVEELLELVQLEGLGDRY-----------PNQLSGGQRQRVALARA 144 (237)
T ss_pred EEecChhhccCCcHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCC-----------hhhCCHHHHHHHHHHHH
Confidence 99999999975 99999986432 1 1234567788888886655443 24799999999999999
Q ss_pred hcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEEEecChh
Q 048639 1039 LLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVVEMGSHS 1117 (1139)
Q Consensus 1039 Llr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~ 1117 (1139)
|+++|+++||||||++||+++.+.+.+.|++.. ...++|+|++||+++.+.. ||+|++|++|++++.|+++
T Consensus 145 l~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~--------~~~~~tvli~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~ 216 (237)
T TIGR00968 145 LAVEPQVLLLDEPFGALDAKVRKELRSWLRKLH--------DEVHVTTVFVTHDQEEAMEVADRIVVMSNGKIEQIGSPD 216 (237)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHH--------HhcCCEEEEEeCCHHHHHhhcCEEEEEECCEEEEecCHH
Confidence 999999999999999999999999999998754 0214569999999999876 9999999999999999999
Q ss_pred HHhhc
Q 048639 1118 TLVAE 1122 (1139)
Q Consensus 1118 eLl~~ 1122 (1139)
++++.
T Consensus 217 ~~~~~ 221 (237)
T TIGR00968 217 EVYDH 221 (237)
T ss_pred HHHcC
Confidence 99854
No 378
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-40 Score=364.80 Aligned_cols=214 Identities=26% Similarity=0.436 Sum_probs=181.4
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHH-Hhhhc
Q 048639 886 IEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRR-LRSQI 964 (1139)
Q Consensus 886 I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~-lR~~i 964 (1139)
|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .|+++
T Consensus 4 l~~~~l~~~~~~---~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 80 (241)
T PRK10895 4 LTAKNLAKAYKG---RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARRGI 80 (241)
T ss_pred EEEeCcEEEeCC---EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHhCe
Confidence 889999999963 46999999999999999999999999999999999999999999999999998877644 57889
Q ss_pred eEEcccccccc-ccHHHHhccCCC---cCC----HHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHH
Q 048639 965 GLVQQEPLLFS-CSIRNNICYGNE---AAS----EAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIA 1036 (1139)
Q Consensus 965 ~~V~Qdp~LF~-gTIreNL~~~~~---~~s----d~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalA 1036 (1139)
+|+||++.+|. .|++||+.++.. ..+ ++.+.+.++..++.+ ........||||||||++||
T Consensus 81 ~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G~~qrv~la 149 (241)
T PRK10895 81 GYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQREDRANELMEEFHIEH-----------LRDSMGQSLSGGERRRVEIA 149 (241)
T ss_pred EEeccCCcccccCcHHHHHhhhhhcccccCHHHHHHHHHHHHHHcCCHH-----------HhhcchhhCCHHHHHHHHHH
Confidence 99999999887 599999986421 112 223455555555443 23344568999999999999
Q ss_pred HHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEEEecC
Q 048639 1037 RTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVVEMGS 1115 (1139)
Q Consensus 1037 RALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~ 1115 (1139)
|||+++|++|||||||++||+.+...+.+.+++.. ..++|+|++||+++.+.. ||+|++|++|++++.|+
T Consensus 150 ral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~---------~~g~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~ 220 (241)
T PRK10895 150 RALAANPKFILLDEPFAGVDPISVIDIKRIIEHLR---------DSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGT 220 (241)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHH---------hcCCEEEEEEcCHHHHHHhcCEEEEEeCCeEEeeCC
Confidence 99999999999999999999999999999998764 234569999999987765 99999999999999999
Q ss_pred hhHHhhc
Q 048639 1116 HSTLVAE 1122 (1139)
Q Consensus 1116 ~~eLl~~ 1122 (1139)
++++++.
T Consensus 221 ~~~~~~~ 227 (241)
T PRK10895 221 PTEILQD 227 (241)
T ss_pred HHHHhcC
Confidence 9998753
No 379
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-40 Score=370.48 Aligned_cols=215 Identities=33% Similarity=0.551 Sum_probs=184.5
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCC--CChHHHhhh
Q 048639 886 IEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKE--YNLRRLRSQ 963 (1139)
Q Consensus 886 I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~--~~l~~lR~~ 963 (1139)
|+++||+++|+. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .+...+|++
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (275)
T PRK13639 2 LETRDLKYSYPD--GTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPTSGEVLIKGEPIKYDKKSLLEVRKT 79 (275)
T ss_pred EEEEEEEEEeCC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEECccccchHHHHHhh
Confidence 789999999963 2369999999999999999999999999999999999999999999999999853 234567899
Q ss_pred ceEEcccc--ccccccHHHHhccCCC--cCC----HHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHH
Q 048639 964 IGLVQQEP--LLFSCSIRNNICYGNE--AAS----EAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAI 1035 (1139)
Q Consensus 964 i~~V~Qdp--~LF~gTIreNL~~~~~--~~s----d~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlal 1035 (1139)
++|+||+| .+|..|+++|+.++.. ..+ .+++.++++.+++.++.+. . ...||||||||++|
T Consensus 80 i~~v~q~~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~-------~----~~~LS~Gq~qrv~l 148 (275)
T PRK13639 80 VGIVFQNPDDQLFAPTVEEDVAFGPLNLGLSKEEVEKRVKEALKAVGMEGFENK-------P----PHHLSGGQKKRVAI 148 (275)
T ss_pred eEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCchhhcC-------C----hhhCCHHHHHHHHH
Confidence 99999998 5788999999976421 112 2457778888888654332 2 34799999999999
Q ss_pred HHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEEEec
Q 048639 1036 ARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVVEMG 1114 (1139)
Q Consensus 1036 ARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ive~G 1114 (1139)
||||+++|++|||||||++||+.+...+.+.|+++. +.++|||++||+++.+.. ||+|++|++|++++.|
T Consensus 149 aral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~---------~~~~til~vtH~~~~~~~~~d~i~~l~~G~i~~~g 219 (275)
T PRK13639 149 AGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLN---------KEGITIIISTHDVDLVPVYADKVYVMSDGKIIKEG 219 (275)
T ss_pred HHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHH---------HCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeC
Confidence 999999999999999999999999999999999764 334569999999999875 9999999999999999
Q ss_pred ChhHHhhc
Q 048639 1115 SHSTLVAE 1122 (1139)
Q Consensus 1115 ~~~eLl~~ 1122 (1139)
+++++++.
T Consensus 220 ~~~~~~~~ 227 (275)
T PRK13639 220 TPKEVFSD 227 (275)
T ss_pred CHHHHhcC
Confidence 99998753
No 380
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-40 Score=368.83 Aligned_cols=223 Identities=30% Similarity=0.457 Sum_probs=186.5
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccc-----CCccEEEECCcccCC--CCh
Q 048639 885 RIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYD-----PNEGIILIDGKGIKE--YNL 957 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~-----p~~G~I~idG~di~~--~~l 957 (1139)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+.
T Consensus 24 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 100 (271)
T PRK14238 24 VFDTQNLNLWYGE---DHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRDQNIFDKSYSV 100 (271)
T ss_pred EEEEeeeEEEECC---cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECCEEcccccccH
Confidence 5999999999963 359999999999999999999999999999999999987 699999999999853 355
Q ss_pred HHHhhhceEEccccccccccHHHHhccCCC--cCC-----HHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHH
Q 048639 958 RRLRSQIGLVQQEPLLFSCSIRNNICYGNE--AAS-----EAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQK 1030 (1139)
Q Consensus 958 ~~lR~~i~~V~Qdp~LF~gTIreNL~~~~~--~~s-----d~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQr 1030 (1139)
..+|++++|+||+|.+|..|+++|+.++.. ..+ ++.+.++++..++.+.+ .......+..||||||
T Consensus 101 ~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l-------~~~~~~~~~~LSgGe~ 173 (271)
T PRK14238 101 EELRTNVGMVFQKPNPFPKSIYDNVTYGPKIHGIKDKKTLDEIVEKSLRGAAIWDEL-------KDRLHDNAYGLSGGQQ 173 (271)
T ss_pred HHHhhhEEEEecCCccccccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchH-------HHHHhcCcccCCHHHH
Confidence 678899999999999999999999986421 111 22345556666553322 2233445678999999
Q ss_pred HHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCE
Q 048639 1031 QRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGE 1109 (1139)
Q Consensus 1031 QrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ 1109 (1139)
||++|||||+++|+||||||||++||+.+...+.+.|+++. ++ +|+|+++|+++.+.. ||||++|++|+
T Consensus 174 qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~---------~~-~tiiivsH~~~~i~~~~d~i~~l~~G~ 243 (271)
T PRK14238 174 QRLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELK---------KD-YSIIIVTHNMQQAARISDKTAFFLNGY 243 (271)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHH---------cC-CEEEEEEcCHHHHHHhCCEEEEEECCE
Confidence 99999999999999999999999999999999999998764 33 569999999999876 99999999999
Q ss_pred EEEecChhHHhhccCChH
Q 048639 1110 VVEMGSHSTLVAESQGVY 1127 (1139)
Q Consensus 1110 ive~G~~~eLl~~~~g~f 1127 (1139)
+++.|+++++.+++...|
T Consensus 244 i~~~g~~~~~~~~~~~~~ 261 (271)
T PRK14238 244 VNEYDDTDKIFSNPSDKR 261 (271)
T ss_pred EEEeCCHHHHHcCCCCHH
Confidence 999999999986644333
No 381
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-40 Score=368.25 Aligned_cols=224 Identities=32% Similarity=0.512 Sum_probs=189.8
Q ss_pred ccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCC-----ccEEEECCcccCC--CC
Q 048639 884 GRIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPN-----EGIILIDGKGIKE--YN 956 (1139)
Q Consensus 884 g~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~-----~G~I~idG~di~~--~~ 956 (1139)
+.|+++||+++|++ .++|+|+||+|++||.+||+|+||||||||+++|.|+++|+ +|+|.+||.++.. .+
T Consensus 6 ~~l~~~nl~~~~~~---~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~~~~ 82 (261)
T PRK14258 6 PAIKVNNLSFYYDT---QKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYERRVN 82 (261)
T ss_pred ceEEEeeEEEEeCC---eeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhccccc
Confidence 46999999999963 35999999999999999999999999999999999999985 8999999999853 34
Q ss_pred hHHHhhhceEEccccccccccHHHHhccCC------CcCC-HHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHH
Q 048639 957 LRRLRSQIGLVQQEPLLFSCSIRNNICYGN------EAAS-EAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQ 1029 (1139)
Q Consensus 957 l~~lR~~i~~V~Qdp~LF~gTIreNL~~~~------~~~s-d~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQ 1029 (1139)
...+|+.++|+||++.+|..|++||+.++. +... ++++.++++.+++.+++.. ..+.....|||||
T Consensus 83 ~~~~~~~i~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LSgGq 155 (261)
T PRK14258 83 LNRLRRQVSMVHPKPNLFPMSVYDNVAYGVKIVGWRPKLEIDDIVESALKDADLWDEIKH-------KIHKSALDLSGGQ 155 (261)
T ss_pred hHHhhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchhhh-------HhcCCcccCCHHH
Confidence 557889999999999999999999997641 1111 3456778888888665542 2234556899999
Q ss_pred HHHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeC-
Q 048639 1030 KQRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDK- 1107 (1139)
Q Consensus 1030 rQrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~- 1107 (1139)
|||++|||||+++|++|||||||++||+++...+.+.|++.. ...++|+|+|||+++.+.. ||+|++|++
T Consensus 156 ~qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~--------~~~~~tiiivsH~~~~i~~~~d~i~~l~~~ 227 (261)
T PRK14258 156 QQRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLR--------LRSELTMVIVSHNLHQVSRLSDFTAFFKGN 227 (261)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHH--------HhCCCEEEEEECCHHHHHHhcCEEEEEccC
Confidence 999999999999999999999999999999999999998753 0224569999999999876 999999999
Q ss_pred ----CEEEEecChhHHhhccCC
Q 048639 1108 ----GEVVEMGSHSTLVAESQG 1125 (1139)
Q Consensus 1108 ----G~ive~G~~~eLl~~~~g 1125 (1139)
|++++.|+++++.+++..
T Consensus 228 ~~~~G~i~~~~~~~~~~~~~~~ 249 (261)
T PRK14258 228 ENRIGQLVEFGLTKKIFNSPHD 249 (261)
T ss_pred CCcCceEEEeCCHHHHHhCCCC
Confidence 999999999999876544
No 382
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=1.4e-40 Score=368.56 Aligned_cols=231 Identities=27% Similarity=0.429 Sum_probs=190.4
Q ss_pred cEEEEeEEEECCCC------CCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChH
Q 048639 885 RIEFQNIKFNYPSR------PEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLR 958 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~------~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~ 958 (1139)
.|+++||+++|+.. .+.++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+.+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~ 83 (267)
T PRK15112 4 LLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHFGDYS 83 (267)
T ss_pred eEEEeceEEEecCCCCcccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCchh
Confidence 38999999999631 124699999999999999999999999999999999999999999999999999765666
Q ss_pred HHhhhceEEccccc--ccc-ccHHHHhccCC-------CcCCHHHHHHHHHHcCch-HHHhhCCCCccccccCCCCCCCh
Q 048639 959 RLRSQIGLVQQEPL--LFS-CSIRNNICYGN-------EAASEAEIVEVSKKANIH-DFISSLPDGYDTVVGEKGCQLSG 1027 (1139)
Q Consensus 959 ~lR~~i~~V~Qdp~--LF~-gTIreNL~~~~-------~~~sd~ei~~al~~~~l~-~~i~~lp~gldt~v~e~G~~LSg 1027 (1139)
..+++++|+||+|. ++. -|+.+|+.+.. +...++++.++++.+++. +.... ...+|||
T Consensus 84 ~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~~LS~ 152 (267)
T PRK15112 84 YRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNTDLEPEQREKQIIETLRQVGLLPDHASY-----------YPHMLAP 152 (267)
T ss_pred hHhccEEEEecCchhhcCcchhHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHHHhc-----------CchhcCH
Confidence 66778999999985 443 38888876421 111235678889999884 33222 2247999
Q ss_pred HHHHHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEe
Q 048639 1028 GQKQRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMD 1106 (1139)
Q Consensus 1028 GQrQrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~ 1106 (1139)
|||||++|||||+++|+||||||||++||+++.+.+.+.|++... ..++|||+|||+++.+.. ||+|++|+
T Consensus 153 G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--------~~g~tviivsH~~~~~~~~~d~i~~l~ 224 (267)
T PRK15112 153 GQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQE--------KQGISYIYVTQHLGMMKHISDQVLVMH 224 (267)
T ss_pred HHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH--------HcCcEEEEEeCCHHHHHHhcCEEEEEE
Confidence 999999999999999999999999999999999999999997640 224569999999999987 99999999
Q ss_pred CCEEEEecChhHHhhcc-CChHHHHHHHH
Q 048639 1107 KGEVVEMGSHSTLVAES-QGVYSRLYQLQ 1134 (1139)
Q Consensus 1107 ~G~ive~G~~~eLl~~~-~g~f~~l~~~~ 1134 (1139)
+|++++.|+++++.+.+ ...+++++...
T Consensus 225 ~G~i~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (267)
T PRK15112 225 QGEVVERGSTADVLASPLHELTKRLIAGH 253 (267)
T ss_pred CCEEEecCCHHHHhcCCCCHHHHHHHHhc
Confidence 99999999999998754 34566777643
No 383
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=1e-40 Score=368.31 Aligned_cols=218 Identities=29% Similarity=0.520 Sum_probs=183.7
Q ss_pred ccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCC--------
Q 048639 255 GNIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDL-------- 326 (1139)
Q Consensus 255 ~~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~-------- 326 (1139)
+.++++|+++.|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...
T Consensus 4 ~~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (257)
T PRK10619 4 NKLNVIDLHKRYGE---HEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLK 80 (257)
T ss_pred ccEEEeeeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccccccccccc
Confidence 46999999999963 4699999999999999999999999999999999999999999999999987532
Q ss_pred -----CHHHHhcceEEEecCCCCCcc-cHHHHHhcCCC---CCCHHHHHHHHHHhcHHHHHHhCCCCCCccc-cccCCCC
Q 048639 327 -----DLKSLRKNIGAVSQEPSLFTG-SLMDNIKVGNM---DADDEQIYNASMMANAHSFISQLPDQYSTEL-GQRGVQL 396 (1139)
Q Consensus 327 -----~~~~~~~~i~~v~Q~~~l~~~-ti~~ni~~g~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i-~~~g~~L 396 (1139)
....+++.++|+||++.+++. |++||+.++.. .....+. ...+.+.++.+ |+.... ...+.+|
T Consensus 81 ~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~-----~~~~~~~l~~~--gl~~~~~~~~~~~L 153 (257)
T PRK10619 81 VADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEA-----RERAVKYLAKV--GIDERAQGKYPVHL 153 (257)
T ss_pred cccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHH-----HHHHHHHHHHc--CCChhhhhCCcccC
Confidence 134567899999999999975 99999986421 1111111 11223455555 454443 6678899
Q ss_pred ChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCCeEEEEecCccchhc-cCEEEEEeCcEEEEe
Q 048639 397 SGGQKQRIAIARAIVKNPPILLLDEATSALDSESEKLVQEALERAM-QGRTVILIAHRMSTIVN-ADMIAVVEDGQVTET 474 (1139)
Q Consensus 397 SgGqkqRi~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~ 474 (1139)
|||||||++|||||+++|+++||||||++||+.+.+.+.+.|+++. +++|+|+|||+++.+.. ||+|++|++|++++.
T Consensus 154 S~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~ 233 (257)
T PRK10619 154 SGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGKIEEE 233 (257)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEe
Confidence 9999999999999999999999999999999999999999998875 48999999999999986 999999999999999
Q ss_pred cChhhhhc
Q 048639 475 GTHHSLLQ 482 (1139)
Q Consensus 475 g~~~~l~~ 482 (1139)
|+++++.+
T Consensus 234 ~~~~~~~~ 241 (257)
T PRK10619 234 GAPEQLFG 241 (257)
T ss_pred CCHHHhhh
Confidence 99998764
No 384
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-40 Score=367.96 Aligned_cols=219 Identities=32% Similarity=0.525 Sum_probs=182.1
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCC-----CccEEEECCccCCCC--CH
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDP-----SNGDILIDSLNIKDL--DL 328 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~-----~~G~i~~~g~~~~~~--~~ 328 (1139)
.|+++|++++|++ +++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|+++... +.
T Consensus 12 ~l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 88 (258)
T PRK14268 12 QIKVENLNLWYGE---KQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDV 88 (258)
T ss_pred eEEEeeeEEEeCC---eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchH
Confidence 5999999999963 4599999999999999999999999999999999999985 899999999988643 23
Q ss_pred HHHhcceEEEecCCCCCcccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhCC--CCCCccccccCCCCChHHHHHH
Q 048639 329 KSLRKNIGAVSQEPSLFTGSLMDNIKVGNM--DADDEQIYNASMMANAHSFISQLP--DQYSTELGQRGVQLSGGQKQRI 404 (1139)
Q Consensus 329 ~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~--~g~~t~i~~~g~~LSgGqkqRi 404 (1139)
..+++.++|++|++.+|+.|++||+.++.. ....++..+ .+.+.++.+. ..........+.+||||||||+
T Consensus 89 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~~~~~LSgG~~qrv 163 (258)
T PRK14268 89 VELRKNVGMVFQKPNPFPMSIYDNVAYGPRIHGANKKDLDG-----VVENALRSAALWDETSDRLKSPALSLSGGQQQRL 163 (258)
T ss_pred HHHhhhEEEEecCCccCcccHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCCCcchhhhhcCChhhCCHHHHHHH
Confidence 456788999999999999999999987531 112222111 1222333331 1112345667889999999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhc
Q 048639 405 AIARAIVKNPPILLLDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQ 482 (1139)
Q Consensus 405 ~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 482 (1139)
+|||||+.+|+++||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 164 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 242 (258)
T PRK14268 164 CIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKKDYTIVIVTHNMQQAARISDYTGFFLMGELIEFGQTRQIFH 242 (258)
T ss_pred HHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 9999999999999999999999999999999999988678999999999999865 99999999999999999998864
No 385
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=8.5e-41 Score=368.00 Aligned_cols=217 Identities=29% Similarity=0.500 Sum_probs=183.8
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCC---------
Q 048639 257 IDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLD--------- 327 (1139)
Q Consensus 257 i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~--------- 327 (1139)
|+++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++..++
T Consensus 1 i~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 77 (252)
T TIGR03005 1 VRFSDVTKRFGI---LTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPIDEGQIQVEGEQLYHMPGRNGPLVPA 77 (252)
T ss_pred CEEEEEEEEeCC---eeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccccccccccccc
Confidence 478999999963 46999999999999999999999999999999999999999999999999886542
Q ss_pred ----HHHHhcceEEEecCCCCCc-ccHHHHHhcCCC---CCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChH
Q 048639 328 ----LKSLRKNIGAVSQEPSLFT-GSLMDNIKVGNM---DADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGG 399 (1139)
Q Consensus 328 ----~~~~~~~i~~v~Q~~~l~~-~ti~~ni~~g~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgG 399 (1139)
...+++.++|++|++.+|. .|+.||+.++.. ....++.. ..+.+.++.+ |++......+.+||||
T Consensus 78 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~-----~~~~~~l~~~--gl~~~~~~~~~~LS~G 150 (252)
T TIGR03005 78 DEKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLVLGMARAEAE-----KRAMELLDMV--GLADKADHMPAQLSGG 150 (252)
T ss_pred chhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CChhHhhcChhhcCHH
Confidence 2356789999999999886 699999987521 11122111 1233455655 5555667788899999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CCeEEEEecCccchhc-cCEEEEEeCcEEEEecC
Q 048639 400 QKQRIAIARAIVKNPPILLLDEATSALDSESEKLVQEALERAMQ--GRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGT 476 (1139)
Q Consensus 400 qkqRi~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~ 476 (1139)
||||++|||||+.+|+++||||||++||+.++..+.+.|+++.+ ++|+|++||+++.+.. ||++++|++|++++.|+
T Consensus 151 ~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~ 230 (252)
T TIGR03005 151 QQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMGFAREFADRVCFFDKGRIVEQGK 230 (252)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999988643 7899999999999865 99999999999999999
Q ss_pred hhhhhcc
Q 048639 477 HHSLLQT 483 (1139)
Q Consensus 477 ~~~l~~~ 483 (1139)
++++.+.
T Consensus 231 ~~~~~~~ 237 (252)
T TIGR03005 231 PDEIFRQ 237 (252)
T ss_pred HHHHhcC
Confidence 9988643
No 386
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-40 Score=365.08 Aligned_cols=219 Identities=34% Similarity=0.507 Sum_probs=186.9
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccC-----CccEEEECCcccCCC--Ch
Q 048639 885 RIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDP-----NEGIILIDGKGIKEY--NL 957 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~~~--~l 957 (1139)
.|+++|++++|++ .++|+|+||+|++||.+||+|+||||||||+++|.|+++| ++|+|.+||.++... +.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 80 (251)
T PRK14270 4 KMESKNLNLWYGE---KQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDV 80 (251)
T ss_pred EEEEEEeEEEECC---eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccH
Confidence 4899999999963 3599999999999999999999999999999999999875 799999999998653 34
Q ss_pred HHHhhhceEEccccccccccHHHHhccCCC--cC-C----HHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHH
Q 048639 958 RRLRSQIGLVQQEPLLFSCSIRNNICYGNE--AA-S----EAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQK 1030 (1139)
Q Consensus 958 ~~lR~~i~~V~Qdp~LF~gTIreNL~~~~~--~~-s----d~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQr 1030 (1139)
..+|++++|+||++.+|..|+++|+.++.. .. + ++++.++++.+++.+.+.. ........||||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G~~ 153 (251)
T PRK14270 81 VELRKRVGMVFQKPNPFPMSIYDNVAYGPRIHGIKDKKELDKIVEWALKKAALWDEVKD-------DLKKSALKLSGGQQ 153 (251)
T ss_pred HHHHhheEEEecCCCcCCCcHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCchhhhh-------HhhCCcccCCHHHH
Confidence 567889999999999999999999986421 11 1 2456778888887544322 12334567999999
Q ss_pred HHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCE
Q 048639 1031 QRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGE 1109 (1139)
Q Consensus 1031 QrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ 1109 (1139)
||++||||++++|+||||||||++||+.+...+.+.|++.. ++ +|+|+|||+++.+.. ||||++|++|+
T Consensus 154 qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~---------~~-~tiiivsH~~~~~~~~~d~v~~l~~G~ 223 (251)
T PRK14270 154 QRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELK---------KE-YTIVIVTHNMQQASRVSDYTAFFLMGD 223 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHH---------hC-CeEEEEEcCHHHHHHhcCEEEEEECCe
Confidence 99999999999999999999999999999999999999764 33 569999999999876 99999999999
Q ss_pred EEEecChhHHhhcc
Q 048639 1110 VVEMGSHSTLVAES 1123 (1139)
Q Consensus 1110 ive~G~~~eLl~~~ 1123 (1139)
+++.|+++++...+
T Consensus 224 i~~~~~~~~~~~~~ 237 (251)
T PRK14270 224 LIEFNKTEKIFLEP 237 (251)
T ss_pred EEEeCCHHHHhcCC
Confidence 99999999998653
No 387
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=6.1e-41 Score=359.35 Aligned_cols=205 Identities=33% Similarity=0.621 Sum_probs=172.5
Q ss_pred EEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcceEE
Q 048639 258 DIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNIGA 337 (1139)
Q Consensus 258 ~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 337 (1139)
+++|++++|++. ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.|+|
T Consensus 1 ~~~~l~~~~~~~-~~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 79 (211)
T cd03225 1 ELKNLSFSYPDG-ARPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPTSGEVLVDGKDLTKLSLKELRRKVGL 79 (211)
T ss_pred CceeEEEecCCC-CeeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccCCHHHHHhhceE
Confidence 368999999642 2469999999999999999999999999999999999999999999999999987777778889999
Q ss_pred EecCCC--CCcccHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHccC
Q 048639 338 VSQEPS--LFTGSLMDNIKVGNMD--ADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVKN 413 (1139)
Q Consensus 338 v~Q~~~--l~~~ti~~ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~~ 413 (1139)
++|++. +++.|++||+.++... ....+..+ .+.+.++.+ |++......+.+||||||||++|||||+.+
T Consensus 80 ~~q~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~laral~~~ 152 (211)
T cd03225 80 VFQNPDDQFFGPTVEEEVAFGLENLGLPEEEIEE-----RVEEALELV--GLEGLRDRSPFTLSGGQKQRVAIAGVLAMD 152 (211)
T ss_pred EecChhhhcCCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CcHhhhcCCcccCCHHHHHHHHHHHHHhcC
Confidence 999984 5678999999875321 11211111 122344444 444555677889999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCCeEEEEecCccchhc-cCEEEEEeCcE
Q 048639 414 PPILLLDEATSALDSESEKLVQEALERAM-QGRTVILIAHRMSTIVN-ADMIAVVEDGQ 470 (1139)
Q Consensus 414 ~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~ 470 (1139)
|+++||||||++||+.++..+.+.|+++. +++|+|++||+++.+.. ||+|++|++|+
T Consensus 153 p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~ 211 (211)
T cd03225 153 PDILLLDEPTAGLDPAGRRELLELLKKLKAEGKTIIIVTHDLDLLLELADRVIVLEDGK 211 (211)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 99999999999999999999999998875 48999999999999987 99999999985
No 388
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-40 Score=367.93 Aligned_cols=217 Identities=28% Similarity=0.454 Sum_probs=180.1
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCC--CCCHHHHhcc
Q 048639 257 IDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIK--DLDLKSLRKN 334 (1139)
Q Consensus 257 i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~--~~~~~~~~~~ 334 (1139)
|+++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++. ..+...++++
T Consensus 2 l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~ 78 (271)
T PRK13638 2 LATSDLWFRYQD---EPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLALRQQ 78 (271)
T ss_pred eEEEEEEEEcCC---cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHHHHhh
Confidence 789999999963 45999999999999999999999999999999999999999999999999984 2344567789
Q ss_pred eEEEecCCC--CCcccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHH
Q 048639 335 IGAVSQEPS--LFTGSLMDNIKVGNM--DADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAI 410 (1139)
Q Consensus 335 i~~v~Q~~~--l~~~ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal 410 (1139)
|+||+|++. ++..|+.+|+.++.. ....++..+. +.+.++.+ |+.......+.+||||||||++|||||
T Consensus 79 i~~v~q~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--~l~~~~~~~~~~LSgG~~qrl~laraL 151 (271)
T PRK13638 79 VATVFQDPEQQIFYTDIDSDIAFSLRNLGVPEAEITRR-----VDEALTLV--DAQHFRHQPIQCLSHGQKKRVAIAGAL 151 (271)
T ss_pred eEEEeeChhhccccccHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHc--CCHhHhcCCchhCCHHHHHHHHHHHHH
Confidence 999999985 566789999987421 1122222111 12233333 333334556789999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhcc
Q 048639 411 VKNPPILLLDEATSALDSESEKLVQEALERAM-QGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQT 483 (1139)
Q Consensus 411 ~~~~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 483 (1139)
+.+|++|||||||++||+.+...+.+.|+++. +++|+|++||+++.+.. ||++++|++|++++.|+++++...
T Consensus 152 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 226 (271)
T PRK13638 152 VLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDIDLIYEISDAVYVLRQGQILTHGAPGEVFAC 226 (271)
T ss_pred HcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 99999999999999999999999999998875 48899999999999865 999999999999999999887654
No 389
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-40 Score=364.67 Aligned_cols=217 Identities=28% Similarity=0.485 Sum_probs=183.1
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCC------CCCHH
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIK------DLDLK 329 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~------~~~~~ 329 (1139)
.++++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++. ..+..
T Consensus 2 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 78 (242)
T PRK11124 2 SIQLNGINCFYGA---HQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIR 78 (242)
T ss_pred EEEEEeeEEEECC---eeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhHH
Confidence 3789999999963 45999999999999999999999999999999999999999999999999873 12345
Q ss_pred HHhcceEEEecCCCCCcc-cHHHHHhcCCC---CCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHH
Q 048639 330 SLRKNIGAVSQEPSLFTG-SLMDNIKVGNM---DADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIA 405 (1139)
Q Consensus 330 ~~~~~i~~v~Q~~~l~~~-ti~~ni~~g~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~ 405 (1139)
.++++++|++|++.+|.. |++||+.++.. ....++. ...+.+.++.+ |++..+...+.+||||||||++
T Consensus 79 ~~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~-----~~~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~ 151 (242)
T PRK11124 79 ELRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQA-----LARAEKLLERL--RLKPYADRFPLHLSGGQQQRVA 151 (242)
T ss_pred HHHhheEEEecCccccCCCcHHHHHHHHHHHHcCCCHHHH-----HHHHHHHHHHc--CChhhhhCChhhCCHHHHHHHH
Confidence 667899999999999875 99999975311 1112211 11234455655 5666677778899999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhc
Q 048639 406 IARAIVKNPPILLLDEATSALDSESEKLVQEALERAM-QGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQ 482 (1139)
Q Consensus 406 lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 482 (1139)
||||++.+|+++||||||++||+.+...+.+.++++. +++|+|++||+++.+.. ||++++|++|++++.|+++++.+
T Consensus 152 laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~ 230 (242)
T PRK11124 152 IARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVEVARKTASRVVYMENGHIVEQGDASCFTQ 230 (242)
T ss_pred HHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHhcC
Confidence 9999999999999999999999999999999998875 48999999999999875 99999999999999999887643
No 390
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-40 Score=366.64 Aligned_cols=222 Identities=25% Similarity=0.452 Sum_probs=186.3
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHH-hcc
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSL-RKN 334 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~-~~~ 334 (1139)
.++++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+ +..
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (255)
T PRK11300 5 LLSVSGLMMRFGG---LLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQIARMG 81 (255)
T ss_pred eEEEeeEEEEECC---EEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHHHhcC
Confidence 4899999999963 469999999999999999999999999999999999999999999999999887765544 456
Q ss_pred eEEEecCCCCCcc-cHHHHHhcCCCCCCH----------HHH--HHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHH
Q 048639 335 IGAVSQEPSLFTG-SLMDNIKVGNMDADD----------EQI--YNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQK 401 (1139)
Q Consensus 335 i~~v~Q~~~l~~~-ti~~ni~~g~~~~~~----------~~~--~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqk 401 (1139)
++|++|++.+|.. |++||+.++...... ... ........+.+.++.+ |++......+.+||||||
T Consensus 82 i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--gl~~~~~~~~~~LS~G~~ 159 (255)
T PRK11300 82 VVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERV--GLLEHANRQAGNLAYGQQ 159 (255)
T ss_pred eEEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhC--ChhhhhhCChhhCCHHHH
Confidence 9999999999986 999999986321000 000 0001112233456665 566667888899999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CCeEEEEecCccchhc-cCEEEEEeCcEEEEecChh
Q 048639 402 QRIAIARAIVKNPPILLLDEATSALDSESEKLVQEALERAMQ--GRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHH 478 (1139)
Q Consensus 402 qRi~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~ 478 (1139)
||++|||||+.+|++|||||||++||+.+.+.+.+.|.++.+ ++|+|++||+++.+.. ||++++|++|++++.|+++
T Consensus 160 qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~ 239 (255)
T PRK11300 160 RRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMKLVMGISDRIYVVNQGTPLANGTPE 239 (255)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEecCCHH
Confidence 999999999999999999999999999999999999988743 7899999999999876 9999999999999999998
Q ss_pred hhhc
Q 048639 479 SLLQ 482 (1139)
Q Consensus 479 ~l~~ 482 (1139)
++..
T Consensus 240 ~~~~ 243 (255)
T PRK11300 240 EIRN 243 (255)
T ss_pred HHhh
Confidence 8754
No 391
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-40 Score=368.69 Aligned_cols=220 Identities=30% Similarity=0.515 Sum_probs=181.1
Q ss_pred ccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccC-----CCccEEEECCccCCC--CC
Q 048639 255 GNIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYD-----PSNGDILIDSLNIKD--LD 327 (1139)
Q Consensus 255 ~~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~-----~~~G~i~~~g~~~~~--~~ 327 (1139)
..++++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++ |++|+|.++|+++.. .+
T Consensus 20 ~~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 96 (268)
T PRK14248 20 HILEVKDLSIYYGE---KRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNIN 96 (268)
T ss_pred ceEEEEEEEEEeCC---ceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEccccccc
Confidence 35999999999963 469999999999999999999999999999999999864 799999999998864 33
Q ss_pred HHHHhcceEEEecCCCCCcccHHHHHhcCCCC--C-CHHHHHHHHHHhcHHHHHHhCC--CCCCccccccCCCCChHHHH
Q 048639 328 LKSLRKNIGAVSQEPSLFTGSLMDNIKVGNMD--A-DDEQIYNASMMANAHSFISQLP--DQYSTELGQRGVQLSGGQKQ 402 (1139)
Q Consensus 328 ~~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~--~-~~~~~~~~~~~~~~~~~i~~l~--~g~~t~i~~~g~~LSgGqkq 402 (1139)
...++++++|++|++.+|+.|++||+.++... . ......+ .+.+.+..+. .++....+..+.+|||||||
T Consensus 97 ~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~q 171 (268)
T PRK14248 97 VVNLRREIGMVFQKPNPFPKSIYNNITHALKYAGERRKSVLDE-----IVEESLTKAALWDEVKDRLHSSALSLSGGQQQ 171 (268)
T ss_pred HHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHH-----HHHHHHHHcCCCcchHHHHhcCcccCCHHHHH
Confidence 44677899999999999999999999875311 1 1111111 1112222221 11123356778899999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhh
Q 048639 403 RIAIARAIVKNPPILLLDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLL 481 (1139)
Q Consensus 403 Ri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~ 481 (1139)
|++|||||+.+|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 172 rl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 251 (268)
T PRK14248 172 RLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKEEYSIIIVTHNMQQALRVSDRTAFFLNGDLVEYDQTEQIF 251 (268)
T ss_pred HHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhcCCEEEEEEeCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999988767899999999998865 9999999999999999998876
Q ss_pred c
Q 048639 482 Q 482 (1139)
Q Consensus 482 ~ 482 (1139)
.
T Consensus 252 ~ 252 (268)
T PRK14248 252 T 252 (268)
T ss_pred h
Confidence 4
No 392
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-40 Score=369.76 Aligned_cols=221 Identities=32% Similarity=0.523 Sum_probs=183.0
Q ss_pred CccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCC-----CccEEEECCccCCC--C
Q 048639 254 DGNIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDP-----SNGDILIDSLNIKD--L 326 (1139)
Q Consensus 254 ~~~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~-----~~G~i~~~g~~~~~--~ 326 (1139)
.+.++++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++| ++|+|.++|.++.. .
T Consensus 23 ~~~l~~~nl~~~~~~---~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~ 99 (272)
T PRK14236 23 QTALEVRNLNLFYGD---KQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKV 99 (272)
T ss_pred CcEEEEEEEEEEECC---eeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECccccc
Confidence 346999999999963 3699999999999999999999999999999999999884 89999999999864 3
Q ss_pred CHHHHhcceEEEecCCCCCcccHHHHHhcCCC--CC-CHHHHHHHHHHhcHHHHHHhC--CCCCCccccccCCCCChHHH
Q 048639 327 DLKSLRKNIGAVSQEPSLFTGSLMDNIKVGNM--DA-DDEQIYNASMMANAHSFISQL--PDQYSTELGQRGVQLSGGQK 401 (1139)
Q Consensus 327 ~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~--~~-~~~~~~~~~~~~~~~~~i~~l--~~g~~t~i~~~g~~LSgGqk 401 (1139)
+...+++.++|++|++.+|+.|++||+.++.. .. ..+...+. +.+.++.+ ++...+..+..+.+||||||
T Consensus 100 ~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~ 174 (272)
T PRK14236 100 DVAELRRRVGMVFQRPNPFPKSIYENVVYGLRLQGINNRRVLDEA-----VERSLRGAALWDEVKDRLHENAFGLSGGQQ 174 (272)
T ss_pred CHHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHH-----HHHHHHHcCCChhHHHHhhCCcccCCHHHH
Confidence 45567889999999999998899999987532 11 11111111 11222222 11122345677889999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhh
Q 048639 402 QRIAIARAIVKNPPILLLDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSL 480 (1139)
Q Consensus 402 qRi~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l 480 (1139)
||++|||||+++|+++||||||++||+.++..+.+.++++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 175 qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 254 (272)
T PRK14236 175 QRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKSKYTIVIVTHNMQQAARVSDYTAFMYMGKLVEYGDTDTL 254 (272)
T ss_pred HHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEeCCHHHHHhhCCEEEEEECCEEEecCCHHHH
Confidence 9999999999999999999999999999999999999988778999999999999865 999999999999999999887
Q ss_pred hc
Q 048639 481 LQ 482 (1139)
Q Consensus 481 ~~ 482 (1139)
..
T Consensus 255 ~~ 256 (272)
T PRK14236 255 FT 256 (272)
T ss_pred hc
Confidence 64
No 393
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=1.2e-40 Score=361.46 Aligned_cols=210 Identities=28% Similarity=0.420 Sum_probs=179.4
Q ss_pred cEEEEeEEEECCCCCC-cccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHH---H
Q 048639 885 RIEFQNIKFNYPSRPE-VTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRR---L 960 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~~-~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~---l 960 (1139)
.|+++||+++|++... .++|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.+||.++...+... +
T Consensus 6 ~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 85 (228)
T PRK10584 6 IVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARAKL 85 (228)
T ss_pred eEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHHHH
Confidence 4899999999964211 35999999999999999999999999999999999999999999999999998877653 3
Q ss_pred -hhhceEEccccccccc-cHHHHhccCC---C---cCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHH
Q 048639 961 -RSQIGLVQQEPLLFSC-SIRNNICYGN---E---AASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQR 1032 (1139)
Q Consensus 961 -R~~i~~V~Qdp~LF~g-TIreNL~~~~---~---~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQr 1032 (1139)
+++++|+||+|.+|.. |+++|+.++. . ....+++.++++..++.++....| ..||||||||
T Consensus 86 ~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~Ge~qr 154 (228)
T PRK10584 86 RAKHVGFVFQSFMLIPTLNALENVELPALLRGESSRQSRNGAKALLEQLGLGKRLDHLP-----------AQLSGGEQQR 154 (228)
T ss_pred HhheEEEEEcccccCCCcCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCCh-----------hhCCHHHHHH
Confidence 3679999999999875 9999997531 1 112456788888988877665443 4699999999
Q ss_pred HHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhcCCEEEEEeCCEEEE
Q 048639 1033 IAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVINSDVIVVMDKGEVVE 1112 (1139)
Q Consensus 1033 lalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~~DrI~vl~~G~ive 1112 (1139)
++|||||+++|++|||||||++||+++.+.+.+.|++... ..++|||+|||+++.+..||+|++|++|+++|
T Consensus 155 l~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--------~~~~tii~~sH~~~~~~~~d~i~~l~~g~i~~ 226 (228)
T PRK10584 155 VALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNR--------EHGTTLILVTHDLQLAARCDRRLRLVNGQLQE 226 (228)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHH--------hcCCEEEEEecCHHHHHhCCEEEEEECCEEEe
Confidence 9999999999999999999999999999999999987630 22456999999999998899999999999987
Q ss_pred e
Q 048639 1113 M 1113 (1139)
Q Consensus 1113 ~ 1113 (1139)
.
T Consensus 227 ~ 227 (228)
T PRK10584 227 E 227 (228)
T ss_pred c
Confidence 4
No 394
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-40 Score=365.12 Aligned_cols=219 Identities=32% Similarity=0.553 Sum_probs=182.7
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCC-----ccEEEECCccCCCC--CH
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPS-----NGDILIDSLNIKDL--DL 328 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~-----~G~i~~~g~~~~~~--~~ 328 (1139)
.|+++|++|+|++ +++|+|+||+|++|++++|+||||||||||+++|+|+++|+ +|+|.++|.++... +.
T Consensus 4 ~l~~~~l~~~~~~---~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~ 80 (251)
T PRK14249 4 KIKIRGVNFFYHK---HQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDV 80 (251)
T ss_pred eEEEEEEEEEECC---eeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccCh
Confidence 5899999999963 45999999999999999999999999999999999999997 69999999988643 34
Q ss_pred HHHhcceEEEecCCCCCcccHHHHHhcCCCC--CC-HHHHHHHHHHhcHHHHHH--hCCCCCCccccccCCCCChHHHHH
Q 048639 329 KSLRKNIGAVSQEPSLFTGSLMDNIKVGNMD--AD-DEQIYNASMMANAHSFIS--QLPDQYSTELGQRGVQLSGGQKQR 403 (1139)
Q Consensus 329 ~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~--~~-~~~~~~~~~~~~~~~~i~--~l~~g~~t~i~~~g~~LSgGqkqR 403 (1139)
..+++.++||+|++.+|+.|++||+.++... .. .++..+.+. +.+. .+.+.+.......+.+||||||||
T Consensus 81 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~-----~~l~~~~l~~~l~~~~~~~~~~LS~Gq~qr 155 (251)
T PRK14249 81 VNLRKRVGMVFQQPNPFPKSIFDNVAFGPRMLGTTAQSRLDEVVE-----KSLRQAALWDEVKDNLHKSGLALSGGQQQR 155 (251)
T ss_pred HHhhceEEEEecCCccCcCcHHHHHhhHHHhcCCChhhHHHHHHH-----HHHHHhCCchhhhhHhhCCcccCCHHHHHH
Confidence 5678899999999999989999999876321 11 111111111 1112 122222344567888999999999
Q ss_pred HHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhc
Q 048639 404 IAIARAIVKNPPILLLDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQ 482 (1139)
Q Consensus 404 i~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 482 (1139)
++|||||+.+|+++||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++..
T Consensus 156 v~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tilivsh~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 235 (251)
T PRK14249 156 LCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELKQNYTIAIVTHNMQQAARASDWTGFLLTGDLVEYGRTGEIFS 235 (251)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhCCEEEEEeCCeEEEeCCHHHHHh
Confidence 99999999999999999999999999999999999887668999999999999876 89999999999999999998754
No 395
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-40 Score=365.10 Aligned_cols=219 Identities=32% Similarity=0.540 Sum_probs=181.0
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCC-----CccEEEECCccCCC--CCH
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDP-----SNGDILIDSLNIKD--LDL 328 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~-----~~G~i~~~g~~~~~--~~~ 328 (1139)
.|+++|+++.|++ +++++|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|+++.. .+.
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~ 79 (250)
T PRK14240 3 KISVKDLDLFYGD---FQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDV 79 (250)
T ss_pred eEEEEEEEEEECC---ceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccch
Confidence 5899999999963 3599999999999999999999999999999999999763 69999999998864 345
Q ss_pred HHHhcceEEEecCCCCCcccHHHHHhcCCCC--C-CHHHHHHHHHHhcHHHHHHhC--CCCCCccccccCCCCChHHHHH
Q 048639 329 KSLRKNIGAVSQEPSLFTGSLMDNIKVGNMD--A-DDEQIYNASMMANAHSFISQL--PDQYSTELGQRGVQLSGGQKQR 403 (1139)
Q Consensus 329 ~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~--~-~~~~~~~~~~~~~~~~~i~~l--~~g~~t~i~~~g~~LSgGqkqR 403 (1139)
..+|+.++|++|++.+|+.|++||+.++... . ..++..+. +.+.++.+ .+++.......+.+||||||||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~t~~~ni~~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qr 154 (250)
T PRK14240 80 NQLRKRVGMVFQQPNPFPMSIYDNVAYGPRTHGIKDKKKLDEI-----VEKSLKGAALWDEVKDRLKKSALGLSGGQQQR 154 (250)
T ss_pred HHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCCHHHHHHH-----HHHHHHHcCCchhhHHHHhcCCCCCCHHHHHH
Confidence 5678899999999999989999999876311 1 11111111 11222222 1122234566788999999999
Q ss_pred HHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhc
Q 048639 404 IAIARAIVKNPPILLLDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQ 482 (1139)
Q Consensus 404 i~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 482 (1139)
++|||||+.+|+++||||||++||+.++..+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++..
T Consensus 155 v~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 234 (250)
T PRK14240 155 LCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKKDYTIVIVTHNMQQASRISDKTAFFLNGEIVEFGDTVDLFT 234 (250)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEEeCHHHHHhhCCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999999999999999999999988778999999999998866 99999999999999999988754
No 396
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=1e-40 Score=375.45 Aligned_cols=215 Identities=21% Similarity=0.416 Sum_probs=185.9
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcceE
Q 048639 257 IDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNIG 336 (1139)
Q Consensus 257 i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 336 (1139)
++++|++++|++ +.+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. +...+++++|
T Consensus 3 l~~~~l~~~~~~---~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~~G~i~i~g~~~~~-~~~~~~~~ig 78 (301)
T TIGR03522 3 IRVSSLTKLYGT---QNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPDSGSVQVCGEDVLQ-NPKEVQRNIG 78 (301)
T ss_pred EEEEEEEEEECC---EEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-ChHHHHhceE
Confidence 789999999963 469999999999999999999999999999999999999999999999999876 3456788999
Q ss_pred EEecCCCCCcc-cHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHccC
Q 048639 337 AVSQEPSLFTG-SLMDNIKVGNM--DADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVKN 413 (1139)
Q Consensus 337 ~v~Q~~~l~~~-ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~~ 413 (1139)
|+||++.++.. |++||+.+... ....++..+ .+++.++.+ |++........+||||||||++|||||+++
T Consensus 79 ~~~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~la~al~~~ 151 (301)
T TIGR03522 79 YLPEHNPLYLDMYVREYLQFIAGIYGMKGQLLKQ-----RVEEMIELV--GLRPEQHKKIGQLSKGYRQRVGLAQALIHD 151 (301)
T ss_pred EecCCCCCCCCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHC--CCchHhcCchhhCCHHHHHHHHHHHHHhcC
Confidence 99999999876 99999976321 111121111 123455555 566667778889999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhc
Q 048639 414 PPILLLDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQ 482 (1139)
Q Consensus 414 ~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 482 (1139)
|++|||||||++||+.+.+.+.+.++++.+++|+|++||+++.+.. ||||++|++|+++..|+++++.+
T Consensus 152 p~lliLDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sH~l~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 221 (301)
T TIGR03522 152 PKVLILDEPTTGLDPNQLVEIRNVIKNIGKDKTIILSTHIMQEVEAICDRVIIINKGKIVADKKLDELSA 221 (301)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHH
Confidence 9999999999999999999999999988778999999999999876 99999999999999999999854
No 397
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=1.1e-40 Score=346.77 Aligned_cols=178 Identities=38% Similarity=0.665 Sum_probs=163.5
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhce
Q 048639 886 IEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQIG 965 (1139)
Q Consensus 886 I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~ 965 (1139)
|+++|++++|+++ +.++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.+||.++... ...+|++++
T Consensus 1 i~~~~~~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~ 78 (178)
T cd03247 1 LSINNVSFSYPEQ-EQQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEITLDGVPVSDL-EKALSSLIS 78 (178)
T ss_pred CEEEEEEEEeCCC-CccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCEEHHHH-HHHHHhhEE
Confidence 5789999999743 23699999999999999999999999999999999999999999999999988766 567889999
Q ss_pred EEccccccccccHHHHhccCCCcCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhcCCCCE
Q 048639 966 LVQQEPLLFSCSIRNNICYGNEAASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIARTLLKRPAI 1045 (1139)
Q Consensus 966 ~V~Qdp~LF~gTIreNL~~~~~~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalARALlr~p~I 1045 (1139)
|+||+|.+|+.|+++|+ ..+||||||||++||||++++|++
T Consensus 79 ~~~q~~~~~~~tv~~~i---------------------------------------~~~LS~G~~qrv~laral~~~p~~ 119 (178)
T cd03247 79 VLNQRPYLFDTTLRNNL---------------------------------------GRRFSGGERQRLALARILLQDAPI 119 (178)
T ss_pred EEccCCeeecccHHHhh---------------------------------------cccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999998 357999999999999999999999
Q ss_pred EEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhcCCEEEEEeCCEEEEec
Q 048639 1046 MLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVINSDVIVVMDKGEVVEMG 1114 (1139)
Q Consensus 1046 LlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~~DrI~vl~~G~ive~G 1114 (1139)
|||||||++||+.+.+.+.+.|++.. + ++|+|+++|+++.+..||++++|++|++++.|
T Consensus 120 lllDEP~~~LD~~~~~~l~~~l~~~~---------~-~~tii~~sh~~~~~~~~d~~~~l~~g~i~~~~ 178 (178)
T cd03247 120 VLLDEPTVGLDPITERQLLSLIFEVL---------K-DKTLIWITHHLTGIEHMDKILFLENGKIIMQG 178 (178)
T ss_pred EEEECCcccCCHHHHHHHHHHHHHHc---------C-CCEEEEEecCHHHHHhCCEEEEEECCEEEecC
Confidence 99999999999999999999998764 3 35699999999999889999999999999865
No 398
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-40 Score=367.17 Aligned_cols=216 Identities=23% Similarity=0.415 Sum_probs=182.1
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHH-hhh
Q 048639 885 RIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRL-RSQ 963 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~l-R~~ 963 (1139)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+ |..
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (255)
T PRK11300 5 LLSVSGLMMRFGG---LLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQIARMG 81 (255)
T ss_pred eEEEeeEEEEECC---EEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHHHhcC
Confidence 4899999999963 469999999999999999999999999999999999999999999999999988876654 456
Q ss_pred ceEEccccccccc-cHHHHhccCCCc---------------C--C----HHHHHHHHHHcCchHHHhhCCCCccccccCC
Q 048639 964 IGLVQQEPLLFSC-SIRNNICYGNEA---------------A--S----EAEIVEVSKKANIHDFISSLPDGYDTVVGEK 1021 (1139)
Q Consensus 964 i~~V~Qdp~LF~g-TIreNL~~~~~~---------------~--s----d~ei~~al~~~~l~~~i~~lp~gldt~v~e~ 1021 (1139)
++|+||+|.+|.+ |+++|+.++... . . .+++.++++..++.+ .....
T Consensus 82 i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-----------~~~~~ 150 (255)
T PRK11300 82 VVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERVGLLE-----------HANRQ 150 (255)
T ss_pred eEEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhCChhh-----------hhhCC
Confidence 9999999999985 999999874210 0 0 123444455555543 33444
Q ss_pred CCCCChHHHHHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CC
Q 048639 1022 GCQLSGGQKQRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SD 1100 (1139)
Q Consensus 1022 G~~LSgGQrQrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~D 1100 (1139)
..+||||||||++|||||+.+|++|||||||++||+.+.+.+.+.|++... +.++|||++||+++.+.+ ||
T Consensus 151 ~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~--------~~~~tii~~sH~~~~~~~~~d 222 (255)
T PRK11300 151 AGNLAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRN--------EHNVTVLLIEHDMKLVMGISD 222 (255)
T ss_pred hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHh--------hcCCEEEEEeCCHHHHHHhCC
Confidence 568999999999999999999999999999999999999999999987641 224569999999999976 99
Q ss_pred EEEEEeCCEEEEecChhHHhhc
Q 048639 1101 VIVVMDKGEVVEMGSHSTLVAE 1122 (1139)
Q Consensus 1101 rI~vl~~G~ive~G~~~eLl~~ 1122 (1139)
+|++|++|++++.|+++++.++
T Consensus 223 ~i~~l~~g~i~~~~~~~~~~~~ 244 (255)
T PRK11300 223 RIYVVNQGTPLANGTPEEIRNN 244 (255)
T ss_pred EEEEEECCeEEecCCHHHHhhC
Confidence 9999999999999999998753
No 399
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-40 Score=365.39 Aligned_cols=215 Identities=27% Similarity=0.464 Sum_probs=186.8
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhce
Q 048639 886 IEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQIG 965 (1139)
Q Consensus 886 I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~ 965 (1139)
|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+...++++++
T Consensus 3 l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (258)
T PRK13548 3 LEARNLSVRLGG---RTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEVRLNGRPLADWSPAELARRRA 79 (258)
T ss_pred EEEEeEEEEeCC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcccCCHHHhhhheE
Confidence 789999999963 36999999999999999999999999999999999999999999999999998888888888999
Q ss_pred EEcccccc-ccccHHHHhccCCCc------CCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 048639 966 LVQQEPLL-FSCSIRNNICYGNEA------ASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIART 1038 (1139)
Q Consensus 966 ~V~Qdp~L-F~gTIreNL~~~~~~------~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalARA 1038 (1139)
|+||++.+ +..|++||+.++... ..++++.++++..++.++..+. ...||||||||++||||
T Consensus 80 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LSgGe~qrv~la~a 148 (258)
T PRK13548 80 VLPQHSSLSFPFTVEEVVAMGRAPHGLSRAEDDALVAAALAQVDLAHLAGRD-----------YPQLSGGEQQRVQLARV 148 (258)
T ss_pred EEccCCcCCCCCCHHHHHHhhhcccCCCcHHHHHHHHHHHHHcCCHhHhcCC-----------cccCCHHHHHHHHHHHH
Confidence 99999987 678999999875211 1234577888888887654332 35799999999999999
Q ss_pred hc------CCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEE
Q 048639 1039 LL------KRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVV 1111 (1139)
Q Consensus 1039 Ll------r~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~iv 1111 (1139)
|+ .+|++|||||||++||+.+.+.+.+.|++... ..++|||++||+++.+.. ||+|++|++|+++
T Consensus 149 l~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--------~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~ 220 (258)
T PRK13548 149 LAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAH--------ERGLAVIVVLHDLNLAARYADRIVLLHQGRLV 220 (258)
T ss_pred HhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH--------hcCCEEEEEECCHHHHHHhcCEEEEEECCEEE
Confidence 99 59999999999999999999999999987530 123469999999999875 9999999999999
Q ss_pred EecChhHHhhc
Q 048639 1112 EMGSHSTLVAE 1122 (1139)
Q Consensus 1112 e~G~~~eLl~~ 1122 (1139)
+.|+++++.+.
T Consensus 221 ~~~~~~~~~~~ 231 (258)
T PRK13548 221 ADGTPAEVLTP 231 (258)
T ss_pred eeCCHHHHhCh
Confidence 99999998753
No 400
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=1.3e-40 Score=361.71 Aligned_cols=213 Identities=30% Similarity=0.484 Sum_probs=175.0
Q ss_pred EEEEeEEEECCCCC-CCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCH---HHHh
Q 048639 257 IDIRDVCFAYPSRP-DQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDL---KSLR 332 (1139)
Q Consensus 257 i~~~~v~~~y~~~~-~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~---~~~~ 332 (1139)
|+++|++++|++.. ..++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. ..++
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (228)
T cd03257 2 LEVKNLSVSFPTGGGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPTSGSIIFDGKDLLKLSRRLRKIRR 81 (228)
T ss_pred eEEEeeeEeccCCCcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccchhhHHHhh
Confidence 78999999996421 1269999999999999999999999999999999999999999999999999877663 5677
Q ss_pred cceEEEecCCC--CC-cccHHHHHhcCCCC---CCHHHHHHHHHHhcHHHHHHhCCCCCC-ccccccCCCCChHHHHHHH
Q 048639 333 KNIGAVSQEPS--LF-TGSLMDNIKVGNMD---ADDEQIYNASMMANAHSFISQLPDQYS-TELGQRGVQLSGGQKQRIA 405 (1139)
Q Consensus 333 ~~i~~v~Q~~~--l~-~~ti~~ni~~g~~~---~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~i~~~g~~LSgGqkqRi~ 405 (1139)
++++|++|++. ++ ..|++||+.++... ...++..+.. +.+.++.+ |+. ......+.+||||||||++
T Consensus 82 ~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~----~~~~l~~~--~l~~~~~~~~~~~LS~G~~qrv~ 155 (228)
T cd03257 82 KEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKLSKKEARKEA----VLLLLVGV--GLPEEVLNRYPHELSGGQRQRVA 155 (228)
T ss_pred ccEEEEecCchhhcCCcCCHHHHHHHHHHhccCCcHHHHHHHH----HHHHHHHC--CCChhHhhCCchhcCHHHHHHHH
Confidence 89999999993 44 46999999764211 1111111110 12344554 442 3567778899999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CCeEEEEecCccchhc-cCEEEEEeCcEEEEec
Q 048639 406 IARAIVKNPPILLLDEATSALDSESEKLVQEALERAMQ--GRTVILIAHRMSTIVN-ADMIAVVEDGQVTETG 475 (1139)
Q Consensus 406 lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g 475 (1139)
|||||+.+|++|||||||++||+.++..+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 156 laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g 228 (228)
T cd03257 156 IARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLGVVAKIADRVAVMYAGKIVEEG 228 (228)
T ss_pred HHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEeCCEEEecC
Confidence 99999999999999999999999999999999988753 7999999999999875 9999999999998754
No 401
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-40 Score=367.00 Aligned_cols=221 Identities=30% Similarity=0.472 Sum_probs=187.2
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccC-----CccEEEECCcccCCCC-hH
Q 048639 885 RIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDP-----NEGIILIDGKGIKEYN-LR 958 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~~~~-l~ 958 (1139)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.+.+ ..
T Consensus 21 ~l~i~nl~~~~~~---~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~ 97 (276)
T PRK14271 21 AMAAVNLTLGFAG---KTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVL 97 (276)
T ss_pred EEEEeeEEEEECC---EEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhH
Confidence 5899999999963 4699999999999999999999999999999999999986 6999999999987663 45
Q ss_pred HHhhhceEEccccccccccHHHHhccCCC---cCCHHHH----HHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHH
Q 048639 959 RLRSQIGLVQQEPLLFSCSIRNNICYGNE---AASEAEI----VEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQ 1031 (1139)
Q Consensus 959 ~lR~~i~~V~Qdp~LF~gTIreNL~~~~~---~~sd~ei----~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQ 1031 (1139)
.+|++++|+||+|.+|..|+++|+.++.. ..+++++ .++++..++.+.. ++.+.....+|||||||
T Consensus 98 ~~~~~i~~v~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~l~~~~~~LSgGq~q 170 (276)
T PRK14271 98 EFRRRVGMLFQRPNPFPMSIMDNVLAGVRAHKLVPRKEFRGVAQARLTEVGLWDAV-------KDRLSDSPFRLSGGQQQ 170 (276)
T ss_pred HHhhheEEeccCCccCCccHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCCchh-------hhHhhCCcccCCHHHHH
Confidence 67899999999999999999999986421 1244333 4456666664432 22334556789999999
Q ss_pred HHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEE
Q 048639 1032 RIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEV 1110 (1139)
Q Consensus 1032 rlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~i 1110 (1139)
|++|||||+++|+||||||||++||+.+.+.+.+.|++.. .+ +|||+|||+++.+.. ||||++|++|++
T Consensus 171 rl~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~---------~~-~tiiivsH~~~~~~~~~dri~~l~~G~i 240 (276)
T PRK14271 171 LLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLA---------DR-LTVIIVTHNLAQAARISDRAALFFDGRL 240 (276)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHh---------cC-CEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 9999999999999999999999999999999999999764 33 569999999999876 999999999999
Q ss_pred EEecChhHHhhccCC
Q 048639 1111 VEMGSHSTLVAESQG 1125 (1139)
Q Consensus 1111 ve~G~~~eLl~~~~g 1125 (1139)
++.|+++++.+.+..
T Consensus 241 ~~~g~~~~~~~~~~~ 255 (276)
T PRK14271 241 VEEGPTEQLFSSPKH 255 (276)
T ss_pred EEeCCHHHHHhCcCc
Confidence 999999999876433
No 402
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-40 Score=376.81 Aligned_cols=230 Identities=22% Similarity=0.332 Sum_probs=189.1
Q ss_pred cEEEEeEEEECCCCC-CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccc----CCccEEEECCcccCCCChHH
Q 048639 885 RIEFQNIKFNYPSRP-EVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYD----PNEGIILIDGKGIKEYNLRR 959 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~-~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~----p~~G~I~idG~di~~~~l~~ 959 (1139)
-|+++|++++|+.+. ...+|+||||+|++||++||+|+||||||||+++|+|+.+ |++|+|.+||.++..++.+.
T Consensus 3 ~L~v~~l~~~y~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~ 82 (330)
T PRK15093 3 LLDIRNLTIEFKTSDGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRE 82 (330)
T ss_pred eEEEeeeEEEEeCCCCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHH
Confidence 378999999996431 2469999999999999999999999999999999999986 58999999999999888766
Q ss_pred Hh----hhceEEcccccc--c-cccHHHHhccCC------C------cCCHHHHHHHHHHcCchHHHhhCCCCccccccC
Q 048639 960 LR----SQIGLVQQEPLL--F-SCSIRNNICYGN------E------AASEAEIVEVSKKANIHDFISSLPDGYDTVVGE 1020 (1139)
Q Consensus 960 lR----~~i~~V~Qdp~L--F-~gTIreNL~~~~------~------~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e 1020 (1139)
++ ++|+||||+|.. + ..|+.+|+.... . ...++++.++++.++|.+.-.. + ..
T Consensus 83 ~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~----~----~~ 154 (330)
T PRK15093 83 RRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDA----M----RS 154 (330)
T ss_pred HHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChHHH----H----hC
Confidence 53 479999999963 3 358888885310 0 0113467888999998643111 1 12
Q ss_pred CCCCCChHHHHHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-C
Q 048639 1021 KGCQLSGGQKQRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-S 1099 (1139)
Q Consensus 1021 ~G~~LSgGQrQrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~ 1099 (1139)
....||||||||++|||||+.+|+||||||||++||+.+...|.+.|+++.. ..++|+|+|||+++.+.. |
T Consensus 155 ~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~--------~~g~tii~itHdl~~v~~~~ 226 (330)
T PRK15093 155 FPYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQ--------NNNTTILLISHDLQMLSQWA 226 (330)
T ss_pred CchhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH--------hcCCEEEEEECCHHHHHHhC
Confidence 2357999999999999999999999999999999999999999999998641 124569999999999976 9
Q ss_pred CEEEEEeCCEEEEecChhHHhhccCChHHHH
Q 048639 1100 DVIVVMDKGEVVEMGSHSTLVAESQGVYSRL 1130 (1139)
Q Consensus 1100 DrI~vl~~G~ive~G~~~eLl~~~~g~f~~l 1130 (1139)
|||+||++|+|+|.|+++++++++...|.+.
T Consensus 227 dri~vm~~G~ive~g~~~~i~~~p~~~y~~~ 257 (330)
T PRK15093 227 DKINVLYCGQTVETAPSKELVTTPHHPYTQA 257 (330)
T ss_pred CEEEEEECCEEEEECCHHHHHhCCCCHHHHH
Confidence 9999999999999999999998766677653
No 403
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=8.8e-41 Score=371.59 Aligned_cols=217 Identities=29% Similarity=0.527 Sum_probs=182.1
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcce
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNI 335 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 335 (1139)
.++++|++++|++ ++.+|+||||++++||++|++||||||||||+++|+|++.|++|+|.++|.+...- ..+.+++|
T Consensus 4 ~i~~~~l~k~~~~--~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~~G~i~i~G~~~~~~-~~~~~~~i 80 (293)
T COG1131 4 VIEVRNLTKKYGG--DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPTSGEILVLGYDVVKE-PAKVRRRI 80 (293)
T ss_pred eeeecceEEEeCC--CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCceEEEEcCEeCccC-HHHHHhhe
Confidence 4788999999973 24699999999999999999999999999999999999999999999999988665 66788999
Q ss_pred EEEecCCCCCcc-cHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHcc
Q 048639 336 GAVSQEPSLFTG-SLMDNIKVGNMD--ADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVK 412 (1139)
Q Consensus 336 ~~v~Q~~~l~~~-ti~~ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~ 412 (1139)
||+||+|.+++. |++||+.|...- ...+. ....+.+.++.+ |++.....+...||+|||||++||+||+.
T Consensus 81 gy~~~~~~~~~~lT~~e~l~~~~~l~~~~~~~-----~~~~~~~~l~~~--~L~~~~~~~~~~lS~G~kqrl~ia~aL~~ 153 (293)
T COG1131 81 GYVPQEPSLYPELTVRENLEFFARLYGLSKEE-----AEERIEELLELF--GLEDKANKKVRTLSGGMKQRLSIALALLH 153 (293)
T ss_pred EEEccCCCCCccccHHHHHHHHHHHhCCChhH-----HHHHHHHHHHHc--CCchhhCcchhhcCHHHHHHHHHHHHHhc
Confidence 999999998865 999999874210 01000 011122334444 33322256678999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC-C-CeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhc
Q 048639 413 NPPILLLDEATSALDSESEKLVQEALERAMQ-G-RTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQ 482 (1139)
Q Consensus 413 ~~~illlDEpts~LD~~~~~~i~~~l~~~~~-~-~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 482 (1139)
+|++|||||||++|||.++..+.+.|+++.+ + +||+++||.++.+.. ||+|++|++|+++..|+.+++..
T Consensus 154 ~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~e~~~~~d~v~il~~G~~~~~g~~~~l~~ 226 (293)
T COG1131 154 DPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILEEAEELCDRVIILNDGKIIAEGTPEELKE 226 (293)
T ss_pred CCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHHHHHHhCCEEEEEeCCEEEEeCCHHHHHH
Confidence 9999999999999999999999999998765 5 799999999999987 99999999999999999988753
No 404
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-40 Score=376.23 Aligned_cols=221 Identities=28% Similarity=0.426 Sum_probs=183.2
Q ss_pred cEEEEeEEEECCCCC-------CCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCH
Q 048639 256 NIDIRDVCFAYPSRP-------DQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDL 328 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~-------~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~ 328 (1139)
.|+++|++++|+... ...+|+||||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|+++...+.
T Consensus 5 ~l~v~nl~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~~G~i~~~g~~l~~~~~ 84 (327)
T PRK11308 5 LLQAIDLKKHYPVKRGLFKPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPTGGELYYQGQDLLKADP 84 (327)
T ss_pred eEEEeeeEEEEcCCCCccccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCCCcEEEECCEEcCcCCH
Confidence 489999999996321 2469999999999999999999999999999999999999999999999999987764
Q ss_pred H---HHhcceEEEecCCC--CCc-ccHHHHHhcCC---CCCCHHHHHHHHHHhcHHHHHHhCCCCCC-ccccccCCCCCh
Q 048639 329 K---SLRKNIGAVSQEPS--LFT-GSLMDNIKVGN---MDADDEQIYNASMMANAHSFISQLPDQYS-TELGQRGVQLSG 398 (1139)
Q Consensus 329 ~---~~~~~i~~v~Q~~~--l~~-~ti~~ni~~g~---~~~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~i~~~g~~LSg 398 (1139)
. .+|++|+||+|+|. |++ .|+.+|+.... ......+. ...+.+.++.+ |++ ......+.+|||
T Consensus 85 ~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~~~~~~~~~-----~~~~~~~l~~~--gL~~~~~~~~p~~LSg 157 (327)
T PRK11308 85 EAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTSLSAAER-----REKALAMMAKV--GLRPEHYDRYPHMFSG 157 (327)
T ss_pred HHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHccCCCHHHH-----HHHHHHHHHHC--CCChHHhcCCCccCCH
Confidence 3 46788999999993 555 48998886421 11122111 12233455554 333 234667889999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CCeEEEEecCccchhc-cCEEEEEeCcEEEEec
Q 048639 399 GQKQRIAIARAIVKNPPILLLDEATSALDSESEKLVQEALERAMQ--GRTVILIAHRMSTIVN-ADMIAVVEDGQVTETG 475 (1139)
Q Consensus 399 GqkqRi~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g 475 (1139)
|||||++|||||+.+|++||+||||++||+.++..+.+.|.++.+ |.|+|+|||+++.+.. ||+|++|++|+|++.|
T Consensus 158 Gq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~adrv~vm~~G~ive~g 237 (327)
T PRK11308 158 GQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYLGRCVEKG 237 (327)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEC
Confidence 999999999999999999999999999999999999999988753 8999999999999976 9999999999999999
Q ss_pred Chhhhhcc
Q 048639 476 THHSLLQT 483 (1139)
Q Consensus 476 ~~~~l~~~ 483 (1139)
+.+++.++
T Consensus 238 ~~~~~~~~ 245 (327)
T PRK11308 238 TKEQIFNN 245 (327)
T ss_pred CHHHHhcC
Confidence 99999865
No 405
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-40 Score=365.26 Aligned_cols=219 Identities=35% Similarity=0.530 Sum_probs=182.1
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhc---cCC--CccEEEECCccCCCC--CH
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARF---YDP--SNGDILIDSLNIKDL--DL 328 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~---~~~--~~G~i~~~g~~~~~~--~~ 328 (1139)
.|+++|+++.|++ +++|+|+||++++||+++|+||||||||||+++|+|+ ++| ++|+|.++|+++... +.
T Consensus 3 ~l~~~~~~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 79 (250)
T PRK14245 3 KIDARDVNFWYGD---FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQV 79 (250)
T ss_pred EEEEEEEEEEECC---EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccH
Confidence 5899999999963 4599999999999999999999999999999999997 455 589999999998653 34
Q ss_pred HHHhcceEEEecCCCCCcccHHHHHhcCCCC--CC-HHHHHHHHHHhcHHHHHHhC--CCCCCccccccCCCCChHHHHH
Q 048639 329 KSLRKNIGAVSQEPSLFTGSLMDNIKVGNMD--AD-DEQIYNASMMANAHSFISQL--PDQYSTELGQRGVQLSGGQKQR 403 (1139)
Q Consensus 329 ~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~--~~-~~~~~~~~~~~~~~~~i~~l--~~g~~t~i~~~g~~LSgGqkqR 403 (1139)
..+++.++|+||++.+|+.|++||+.++... .. .+...+ .+.+.++.+ ++...+...+.+.+||||||||
T Consensus 80 ~~~~~~i~~v~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qr 154 (250)
T PRK14245 80 DELRKNVGMVFQRPNPFPKSIFENVAYGLRVNGVKDNAFIRQ-----RVEETLKGAALWDEVKDKLKESAFALSGGQQQR 154 (250)
T ss_pred HHHhhheEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHH-----HHHHHHHHcCCCcchhhhhhCCcccCCHHHHHH
Confidence 5678899999999999988999999875311 11 111111 112333433 2122344567888999999999
Q ss_pred HHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhc
Q 048639 404 IAIARAIVKNPPILLLDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQ 482 (1139)
Q Consensus 404 i~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 482 (1139)
++|||||+.+|+++||||||++||+.++..+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++.+
T Consensus 155 v~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~v~~l~~G~~~~~~~~~~~~~ 234 (250)
T PRK14245 155 LCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELKKDYTIVIVTHNMQQAARVSDKTAFFYMGEMVEYDDTKKIFT 234 (250)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEECCHHHHhc
Confidence 99999999999999999999999999999999999988778999999999999865 99999999999999999999865
No 406
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-40 Score=364.87 Aligned_cols=217 Identities=26% Similarity=0.435 Sum_probs=183.2
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcce
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNI 335 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 335 (1139)
.|+++|++++|++ +++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.+
T Consensus 2 ~l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~~~g~~~~~~~~~~~~~~i 78 (258)
T PRK13548 2 MLEARNLSVRLGG---RTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEVRLNGRPLADWSPAELARRR 78 (258)
T ss_pred eEEEEeEEEEeCC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcccCCHHHhhhhe
Confidence 3789999999963 4599999999999999999999999999999999999999999999999998877777778899
Q ss_pred EEEecCCCC-CcccHHHHHhcCCCCC--CHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHc-
Q 048639 336 GAVSQEPSL-FTGSLMDNIKVGNMDA--DDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIV- 411 (1139)
Q Consensus 336 ~~v~Q~~~l-~~~ti~~ni~~g~~~~--~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~- 411 (1139)
+|++|++.+ +..|++||+.++.... ..++.. ..+.+.++.+ |++......+.+||||||||++|||||+
T Consensus 79 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LSgGe~qrv~la~al~~ 151 (258)
T PRK13548 79 AVLPQHSSLSFPFTVEEVVAMGRAPHGLSRAEDD-----ALVAAALAQV--DLAHLAGRDYPQLSGGEQQRVQLARVLAQ 151 (258)
T ss_pred EEEccCCcCCCCCCHHHHHHhhhcccCCCcHHHH-----HHHHHHHHHc--CCHhHhcCCcccCCHHHHHHHHHHHHHhc
Confidence 999999987 5679999998863211 111111 1122334433 4444456677899999999999999999
Q ss_pred -----cCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhc
Q 048639 412 -----KNPPILLLDEATSALDSESEKLVQEALERAM--QGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQ 482 (1139)
Q Consensus 412 -----~~~~illlDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 482 (1139)
.+|++|||||||++||+.+...+.+.|+++. +++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 152 ~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 230 (258)
T PRK13548 152 LWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLNLAARYADRIVLLHQGRLVADGTPAEVLT 230 (258)
T ss_pred ccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhcCEEEEEECCEEEeeCCHHHHhC
Confidence 5999999999999999999999999998875 47899999999999875 99999999999999999988765
No 407
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.2e-41 Score=357.56 Aligned_cols=202 Identities=25% Similarity=0.489 Sum_probs=172.9
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhce
Q 048639 886 IEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQIG 965 (1139)
Q Consensus 886 I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~ 965 (1139)
|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ..|++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~----~~~~~i~ 73 (210)
T cd03269 1 LEVENVTKRFGR---VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDI----AARNRIG 73 (210)
T ss_pred CEEEEEEEEECC---EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhH----HHHccEE
Confidence 578999999963 469999999999999999999999999999999999999999999999998753 4678999
Q ss_pred EEccccccccc-cHHHHhccCCC--cC----CHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 048639 966 LVQQEPLLFSC-SIRNNICYGNE--AA----SEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIART 1038 (1139)
Q Consensus 966 ~V~Qdp~LF~g-TIreNL~~~~~--~~----sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalARA 1038 (1139)
|+||++.+|.+ |+++|+.++.. .. .++++.++++..++.+.... ...+||||||||++||||
T Consensus 74 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrl~la~a 142 (210)
T cd03269 74 YLPEERGLYPKMKVIDQLVYLAQLKGLKKEEARRRIDEWLERLELSEYANK-----------RVEELSKGNQQKVQFIAA 142 (210)
T ss_pred EeccCCcCCcCCcHHHHHHHHHHHcCCChHHHHHHHHHHHHHcCChHHHhC-----------cHhhCCHHHHHHHHHHHH
Confidence 99999999875 99999976421 11 13456677777777654432 345799999999999999
Q ss_pred hcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEEEec
Q 048639 1039 LLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVVEMG 1114 (1139)
Q Consensus 1039 Llr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ive~G 1114 (1139)
|+++|++|||||||++||+.+.+.+.+.|++.. ++++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 143 l~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~---------~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 210 (210)
T cd03269 143 VIHDPELLILDEPFSGLDPVNVELLKDVIRELA---------RAGKTVILSTHQMELVEELCDRVLLLNKGRAVLYG 210 (210)
T ss_pred HhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHH---------HCCCEEEEECCCHHHHHHhhhEEEEEeCCEEEecC
Confidence 999999999999999999999999999998764 234569999999999876 9999999999998865
No 408
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=1e-40 Score=358.54 Aligned_cols=205 Identities=33% Similarity=0.524 Sum_probs=170.1
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHH---HHhc
Q 048639 257 IDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLK---SLRK 333 (1139)
Q Consensus 257 i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~---~~~~ 333 (1139)
++++|++++|++ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.. .+++
T Consensus 2 l~~~~l~~~~~~--~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (214)
T TIGR02673 2 IEFHNVSKAYPG--GVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPLLRR 79 (214)
T ss_pred EEEEeeeEEeCC--CceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHHh
Confidence 789999999952 24699999999999999999999999999999999999999999999999999876543 4678
Q ss_pred ceEEEecCCCCCc-ccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHH
Q 048639 334 NIGAVSQEPSLFT-GSLMDNIKVGNM--DADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAI 410 (1139)
Q Consensus 334 ~i~~v~Q~~~l~~-~ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal 410 (1139)
.++|++|++.+|. .|++||+.++.. ....++.. ..+.+.++.+ |+.........+||||||||++|||||
T Consensus 80 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~al 152 (214)
T TIGR02673 80 RIGVVFQDFRLLPDRTVYENVALPLEVRGKKEREIQ-----RRVGAALRQV--GLEHKADAFPEQLSGGEQQRVAIARAI 152 (214)
T ss_pred heEEEecChhhccCCcHHHHHHHHHHHcCCCHHHHH-----HHHHHHHHHc--CChhhhhCChhhCCHHHHHHHHHHHHH
Confidence 8999999999986 599999987521 11111111 1122334443 333334455679999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCCeEEEEecCccchhc-cCEEEEEeCcE
Q 048639 411 VKNPPILLLDEATSALDSESEKLVQEALERAM-QGRTVILIAHRMSTIVN-ADMIAVVEDGQ 470 (1139)
Q Consensus 411 ~~~~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~ 470 (1139)
+.+|+++||||||++||+.++..+.+.++++. +++|+|++||+++.+.. ||++++|++|+
T Consensus 153 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 153 VNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred hCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 99999999999999999999999999998864 48999999999999986 99999999985
No 409
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-40 Score=356.22 Aligned_cols=203 Identities=28% Similarity=0.517 Sum_probs=175.8
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhce
Q 048639 886 IEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQIG 965 (1139)
Q Consensus 886 I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~ 965 (1139)
|+++|++++|++. . .|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+. .|++++
T Consensus 1 i~~~~l~~~~~~~---~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~--~~~~i~ 73 (211)
T cd03298 1 VRLDKIRFSYGEQ---P--MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPP--ADRPVS 73 (211)
T ss_pred CEEEeEEEEeCCE---e--cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCH--hHccEE
Confidence 5789999999632 2 39999999999999999999999999999999999999999999999987654 467899
Q ss_pred EEccccccccc-cHHHHhccCCC-c-----CCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 048639 966 LVQQEPLLFSC-SIRNNICYGNE-A-----ASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIART 1038 (1139)
Q Consensus 966 ~V~Qdp~LF~g-TIreNL~~~~~-~-----~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalARA 1038 (1139)
|+||+|.+|.+ |++||+.++.. . .+++++.++++..++.++..+.| ..||||||||++||||
T Consensus 74 ~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~ia~a 142 (211)
T cd03298 74 MLFQENNLFAHLTVEQNVGLGLSPGLKLTAEDRQAIEVALARVGLAGLEKRLP-----------GELSGGERQRVALARV 142 (211)
T ss_pred EEecccccCCCCcHHHHHhcccccccCccHHHHHHHHHHHHHcCCHHHHhCCc-----------ccCCHHHHHHHHHHHH
Confidence 99999999975 99999986531 1 23457888999999987765544 3699999999999999
Q ss_pred hcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEEEec
Q 048639 1039 LLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVVEMG 1114 (1139)
Q Consensus 1039 Llr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ive~G 1114 (1139)
++++|++|||||||++||+++...+.+.|++... ..++|+|+|||+++.+.. ||||++|++|++++.|
T Consensus 143 l~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--------~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 143 LVRDKPVLLLDEPFAALDPALRAEMLDLVLDLHA--------ETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH--------hcCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 9999999999999999999999999999997641 224569999999999976 9999999999998865
No 410
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-40 Score=366.99 Aligned_cols=220 Identities=31% Similarity=0.480 Sum_probs=183.6
Q ss_pred ccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccC-----CCccEEEECCccCCC--CC
Q 048639 255 GNIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYD-----PSNGDILIDSLNIKD--LD 327 (1139)
Q Consensus 255 ~~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~-----~~~G~i~~~g~~~~~--~~ 327 (1139)
..|+++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++ |++|+|.++|+++.. .+
T Consensus 19 ~~l~~~nl~~~~~~---~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~ 95 (267)
T PRK14237 19 IALSTKDLHVYYGK---KEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEIN 95 (267)
T ss_pred eEEEEeeEEEEECC---eeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCC
Confidence 46999999999963 469999999999999999999999999999999999996 589999999998854 34
Q ss_pred HHHHhcceEEEecCCCCCcccHHHHHhcCCCC--C-CHHHHHHHHHHhcHHHHHHhC--CCCCCccccccCCCCChHHHH
Q 048639 328 LKSLRKNIGAVSQEPSLFTGSLMDNIKVGNMD--A-DDEQIYNASMMANAHSFISQL--PDQYSTELGQRGVQLSGGQKQ 402 (1139)
Q Consensus 328 ~~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~--~-~~~~~~~~~~~~~~~~~i~~l--~~g~~t~i~~~g~~LSgGqkq 402 (1139)
...+++.|+|++|++.+|..|++||+.++... . ..++..+ .+.+.++.+ .++.++..+..+.+|||||||
T Consensus 96 ~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~i~~~~~~~~~~LS~G~~q 170 (267)
T PRK14237 96 VYEMRKHIGMVFQRPNPFAKSIYENITFALERAGVKDKKVLDE-----IVETSLKQAALWDQVKDDLHKSALTLSGGQQQ 170 (267)
T ss_pred hHHHhcceEEEecCCccccccHHHHHHhHHHhcCCCCHHHHHH-----HHHHHHHHcCCCchhhhhhcCCcccCCHHHHH
Confidence 55678899999999999989999999875321 1 1111111 111223332 111234567788899999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhh
Q 048639 403 RIAIARAIVKNPPILLLDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLL 481 (1139)
Q Consensus 403 Ri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~ 481 (1139)
|++|||||+++|+++||||||++||+.+...+.+.|+++.++.|+|++||+++.+.. ||++++|++|++++.|+++++.
T Consensus 171 rl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 250 (267)
T PRK14237 171 RLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELKKNYTIIIVTHNMQQAARASDYTAFFYLGDLIEYDKTRNIF 250 (267)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhcCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999999988778999999999999865 9999999999999999999886
Q ss_pred c
Q 048639 482 Q 482 (1139)
Q Consensus 482 ~ 482 (1139)
.
T Consensus 251 ~ 251 (267)
T PRK14237 251 T 251 (267)
T ss_pred c
Confidence 4
No 411
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-40 Score=364.09 Aligned_cols=225 Identities=28% Similarity=0.417 Sum_probs=191.6
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccC-----CccEEEECCcccCCC--Ch
Q 048639 885 RIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDP-----NEGIILIDGKGIKEY--NL 957 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~~~--~l 957 (1139)
.+.+++++++|.. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++... +.
T Consensus 8 ~~~~~~~~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~ 84 (261)
T PRK14263 8 VMDCKLDKIFYGN---FMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDP 84 (261)
T ss_pred eEEEEeEEEEeCC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccch
Confidence 4889999999953 4699999999999999999999999999999999999986 799999999998653 44
Q ss_pred HHHhhhceEEccccccccccHHHHhccCCC-----cCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHH
Q 048639 958 RRLRSQIGLVQQEPLLFSCSIRNNICYGNE-----AASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQR 1032 (1139)
Q Consensus 958 ~~lR~~i~~V~Qdp~LF~gTIreNL~~~~~-----~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQr 1032 (1139)
..+|++++|+||+|.+|..|++||+.++.. ...++++.++++.+++.+.+.. ..++...+||||||||
T Consensus 85 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~-------~~~~~~~~LS~G~~qr 157 (261)
T PRK14263 85 VVVRRYIGMVFQQPNPFSMSIFDNVAFGLRLNRYKGDLGDRVKHALQGAALWDEVKD-------KLKVSGLSLSGGQQQR 157 (261)
T ss_pred HhhhhceEEEecCCccccccHHHHHHHHHhhcCchHHHHHHHHHHHHHcCCchhhhh-------hhhCCcccCCHHHHHH
Confidence 467889999999999999999999987521 1123578888999988665532 2234566899999999
Q ss_pred HHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEe-----
Q 048639 1033 IAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMD----- 1106 (1139)
Q Consensus 1033 lalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~----- 1106 (1139)
++|||||+++|+||||||||++||+.+...+.+.|++.. + ++|+|+|||+++.+.. ||||++|+
T Consensus 158 v~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~---------~-~~tii~isH~~~~i~~~~d~v~~l~~~~~~ 227 (261)
T PRK14263 158 LCIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELK---------K-DYTIALVTHNMQQAIRVADTTAFFSVDISQ 227 (261)
T ss_pred HHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh---------c-CCeEEEEeCCHHHHHHhCCEEEEEeccccc
Confidence 999999999999999999999999999999999999764 3 3569999999999876 99999996
Q ss_pred ---CCEEEEecChhHHhhccCChHHH
Q 048639 1107 ---KGEVVEMGSHSTLVAESQGVYSR 1129 (1139)
Q Consensus 1107 ---~G~ive~G~~~eLl~~~~g~f~~ 1129 (1139)
+|++++.|+++++++++...+.+
T Consensus 228 ~~~~G~i~~~g~~~~~~~~~~~~~~~ 253 (261)
T PRK14263 228 GTRTGYLVEMGPTAQIFQNPREQLTS 253 (261)
T ss_pred ccCCceEEEeCCHHHHHhCCCcHHHH
Confidence 89999999999998764434443
No 412
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-40 Score=366.26 Aligned_cols=220 Identities=30% Similarity=0.467 Sum_probs=181.1
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhcc--CC---CccEEEECCccCCCC--CH
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFY--DP---SNGDILIDSLNIKDL--DL 328 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~--~~---~~G~i~~~g~~~~~~--~~ 328 (1139)
.++++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|++ +| ++|+|.++|+++... +.
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~ 81 (252)
T PRK14239 5 ILQVSDLSVYYNK---KKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDT 81 (252)
T ss_pred eEEEEeeEEEECC---eeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccch
Confidence 4899999999963 45999999999999999999999999999999999995 36 599999999988643 34
Q ss_pred HHHhcceEEEecCCCCCcccHHHHHhcCCC--CCC-HHHHHHHHHHhcHHHHHHhCC--CCCCccccccCCCCChHHHHH
Q 048639 329 KSLRKNIGAVSQEPSLFTGSLMDNIKVGNM--DAD-DEQIYNASMMANAHSFISQLP--DQYSTELGQRGVQLSGGQKQR 403 (1139)
Q Consensus 329 ~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~--~~~-~~~~~~~~~~~~~~~~i~~l~--~g~~t~i~~~g~~LSgGqkqR 403 (1139)
..+++.++||+|++.+|+.|++||+.++.. ... .+...+. +.+.++.+. .+..+..+..+.+||||||||
T Consensus 82 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qr 156 (252)
T PRK14239 82 VDLRKEIGMVFQQPNPFPMSIYENVVYGLRLKGIKDKQVLDEA-----VEKSLKGASIWDEVKDRLHDSALGLSGGQQQR 156 (252)
T ss_pred HhhhhcEEEEecCCccCcCcHHHHHHHHHHHcCCCcHHHHHHH-----HHHHHHHcCCchhHHHHHhcCcccCCHHHHHH
Confidence 566788999999999999999999987521 111 1111111 112233331 112234567788999999999
Q ss_pred HHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhc
Q 048639 404 IAIARAIVKNPPILLLDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQ 482 (1139)
Q Consensus 404 i~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 482 (1139)
++|||||+.+|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 157 v~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 236 (252)
T PRK14239 157 VCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKDDYTMLLVTRSMQQASRISDRTGFFLDGDLIEYNDTKQMFM 236 (252)
T ss_pred HHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhhCCeEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999999999999999999999987667999999999998865 99999999999999999998864
Q ss_pred c
Q 048639 483 T 483 (1139)
Q Consensus 483 ~ 483 (1139)
.
T Consensus 237 ~ 237 (252)
T PRK14239 237 N 237 (252)
T ss_pred C
Confidence 3
No 413
>cd03246 ABCC_Protease_Secretion This family represents the ABC component of the protease secretion system PrtD, a 60-kDa integral membrane protein sharing 37% identity with HlyB, the ABC component of the alpha-hemolysin secretion pathway, in the C-terminal domain. They export degradative enzymes by using a type I protein secretion system and lack an N-terminal signal peptide, but contain a C-terminal secretion signal. The Type I secretion apparatus is made up of three components, an ABC transporter, a membrane fusion protein (MFP), and an outer membrane protein (OMP). For the HlyA transporter complex, HlyB (ABC transporter) and HlyD (MFP) reside in the inner membrane of E. coli. The OMP component is TolC, which is thought to interact with the MFP to form a continuous channel across the periplasm from the cytoplasm to the exterior. HlyB belongs to the family of ABC transporters, which are ubiquitous, ATP-dependent transmembrane pumps or channels. The spectrum of transport substra
Probab=100.00 E-value=1.6e-40 Score=343.57 Aligned_cols=172 Identities=41% Similarity=0.719 Sum_probs=161.0
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcceE
Q 048639 257 IDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNIG 336 (1139)
Q Consensus 257 i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 336 (1139)
|+++|++++|++. ..++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.+.+...++++++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (173)
T cd03246 1 LEVENVSFRYPGA-EPPVLRNVSFSIEPGESLAIIGPSGSGKSTLARLILGLLRPTSGRVRLDGADISQWDPNELGDHVG 79 (173)
T ss_pred CEEEEEEEEcCCC-CCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEEcccCCHHHHHhheE
Confidence 4789999999742 246999999999999999999999999999999999999999999999999998888888889999
Q ss_pred EEecCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHccCCCE
Q 048639 337 AVSQEPSLFTGSLMDNIKVGNMDADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVKNPPI 416 (1139)
Q Consensus 337 ~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~~~~i 416 (1139)
|++|++.+|+.|++||+ ||||||||++|||||+.+|++
T Consensus 80 ~~~q~~~~~~~tv~~~l------------------------------------------LS~G~~qrv~la~al~~~p~~ 117 (173)
T cd03246 80 YLPQDDELFSGSIAENI------------------------------------------LSGGQRQRLGLARALYGNPRI 117 (173)
T ss_pred EECCCCccccCcHHHHC------------------------------------------cCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999997 999999999999999999999
Q ss_pred EEEeCCCCCCCHHhHHHHHHHHHHHc-CCCeEEEEecCccchhccCEEEEEeCcEE
Q 048639 417 LLLDEATSALDSESEKLVQEALERAM-QGRTVILIAHRMSTIVNADMIAVVEDGQV 471 (1139)
Q Consensus 417 lllDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~~~~~~~~d~i~~l~~G~i 471 (1139)
+||||||++||+.++..+.+.++++. +++|+|++||+++.+..||++++|++|++
T Consensus 118 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i 173 (173)
T cd03246 118 LVLDEPNSHLDVEGERALNQAIAALKAAGATRIVIAHRPETLASADRILVLEDGRV 173 (173)
T ss_pred EEEECCccccCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhCCEEEEEECCCC
Confidence 99999999999999999999998875 48899999999998877999999999974
No 414
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-40 Score=380.62 Aligned_cols=214 Identities=30% Similarity=0.500 Sum_probs=186.5
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCC----ChHHHh
Q 048639 886 IEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEY----NLRRLR 961 (1139)
Q Consensus 886 I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~----~l~~lR 961 (1139)
|++ |++++|.+ . .+ |+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||.++... +....|
T Consensus 2 l~~-~l~k~~~~---~-~~-~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~~~~~~~~~~~~~~~ 75 (352)
T PRK11144 2 LEL-NFKQQLGD---L-CL-TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQKGRIVLNGRVLFDAEKGICLPPEK 75 (352)
T ss_pred eEE-EEEEEeCC---E-EE-EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccchhh
Confidence 567 99999953 2 23 89999999999999999999999999999999999999999999998653 244568
Q ss_pred hhceEEcccccccc-ccHHHHhccCCCcCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhc
Q 048639 962 SQIGLVQQEPLLFS-CSIRNNICYGNEAASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIARTLL 1040 (1139)
Q Consensus 962 ~~i~~V~Qdp~LF~-gTIreNL~~~~~~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalARALl 1040 (1139)
++++||||++.+|. .|+++|+.++.....++++.++++..++.++.++.| .+||||||||++|||||+
T Consensus 76 ~~i~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----------~~LSgGq~qRvalaraL~ 144 (352)
T PRK11144 76 RRIGYVFQDARLFPHYKVRGNLRYGMAKSMVAQFDKIVALLGIEPLLDRYP-----------GSLSGGEKQRVAIGRALL 144 (352)
T ss_pred CCEEEEcCCcccCCCCcHHHHHHhhhhhhhHHHHHHHHHHcCCchhhhCCc-----------ccCCHHHHHHHHHHHHHH
Confidence 89999999999996 599999998754445677888999998877665543 479999999999999999
Q ss_pred CCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEEEecChhHH
Q 048639 1041 KRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVVEMGSHSTL 1119 (1139)
Q Consensus 1041 r~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eL 1119 (1139)
++|++|||||||++||+.+.+.+.+.|++... ..++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 145 ~~p~llLLDEPts~LD~~~~~~l~~~L~~l~~--------~~g~tii~vTHd~~~~~~~~d~i~~l~~G~i~~~g~~~~i 216 (352)
T PRK11144 145 TAPELLLMDEPLASLDLPRKRELLPYLERLAR--------EINIPILYVSHSLDEILRLADRVVVLEQGKVKAFGPLEEV 216 (352)
T ss_pred cCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH--------hcCCeEEEEecCHHHHHHhCCEEEEEeCCEEEEecCHHHH
Confidence 99999999999999999999999999987641 224569999999998876 999999999999999999999
Q ss_pred hhccC
Q 048639 1120 VAESQ 1124 (1139)
Q Consensus 1120 l~~~~ 1124 (1139)
.+++.
T Consensus 217 ~~~p~ 221 (352)
T PRK11144 217 WASSA 221 (352)
T ss_pred HhCcc
Confidence 98765
No 415
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-40 Score=367.83 Aligned_cols=218 Identities=30% Similarity=0.517 Sum_probs=182.4
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCC--CCHHHHhcc
Q 048639 257 IDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKD--LDLKSLRKN 334 (1139)
Q Consensus 257 i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~--~~~~~~~~~ 334 (1139)
++++|++++|++ .+++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. .+...+++.
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (275)
T PRK13639 2 LETRDLKYSYPD--GTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPTSGEVLIKGEPIKYDKKSLLEVRKT 79 (275)
T ss_pred EEEEEEEEEeCC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEECccccchHHHHHhh
Confidence 789999999963 2469999999999999999999999999999999999999999999999998852 234467889
Q ss_pred eEEEecCC--CCCcccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHH
Q 048639 335 IGAVSQEP--SLFTGSLMDNIKVGNM--DADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAI 410 (1139)
Q Consensus 335 i~~v~Q~~--~l~~~ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal 410 (1139)
|+|++|++ .+++.|++||+.++.. ....++..+ .+.+.++.+ |+.......+.+||||||||++|||||
T Consensus 80 i~~v~q~~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~-----~~~~~l~~~--~L~~~~~~~~~~LS~Gq~qrv~laral 152 (275)
T PRK13639 80 VGIVFQNPDDQLFAPTVEEDVAFGPLNLGLSKEEVEK-----RVKEALKAV--GMEGFENKPPHHLSGGQKKRVAIAGIL 152 (275)
T ss_pred eEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHC--CCchhhcCChhhCCHHHHHHHHHHHHH
Confidence 99999998 4778899999987532 112222211 122334444 343444566789999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhcc
Q 048639 411 VKNPPILLLDEATSALDSESEKLVQEALERAM-QGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQT 483 (1139)
Q Consensus 411 ~~~~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 483 (1139)
+.+|+++||||||++||+.+...+.+.+.++. +++|+|++||+++.+.. ||++++|++|++++.|+++++...
T Consensus 153 ~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 227 (275)
T PRK13639 153 AMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVDLVPVYADKVYVMSDGKIIKEGTPKEVFSD 227 (275)
T ss_pred hcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 99999999999999999999999999998875 48999999999999875 999999999999999999988654
No 416
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-40 Score=368.92 Aligned_cols=225 Identities=32% Similarity=0.485 Sum_probs=187.9
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccc-----CCccEEEECCcccCCC--Ch
Q 048639 885 RIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYD-----PNEGIILIDGKGIKEY--NL 957 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~-----p~~G~I~idG~di~~~--~l 957 (1139)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+.+ |++|+|.+||.++... +.
T Consensus 39 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g~~i~~~~~~~ 115 (286)
T PRK14275 39 HVVAKNFSIYYGE---FEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDGEDIYGKFTDE 115 (286)
T ss_pred EEEEeeeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECCEEhhhcccch
Confidence 5899999999963 359999999999999999999999999999999999865 4999999999988643 33
Q ss_pred HHHhhhceEEccccccccccHHHHhccCCC--cC-C----HHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHH
Q 048639 958 RRLRSQIGLVQQEPLLFSCSIRNNICYGNE--AA-S----EAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQK 1030 (1139)
Q Consensus 958 ~~lR~~i~~V~Qdp~LF~gTIreNL~~~~~--~~-s----d~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQr 1030 (1139)
..+|++++||||+|.+|..|++||+.++.. .. + ++++.++++..++.+.+. +.++ .....||||||
T Consensus 116 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~---~~~~----~~~~~LSgGq~ 188 (286)
T PRK14275 116 VLLRKKIGMVFQKPNPFPKSIFDNIAYGPRLHGINDKKQLEEIVEKSLRKAALWDEVS---DRLD----KNALGLSGGQQ 188 (286)
T ss_pred HHhhhcEEEECCCCCCCccCHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHhCCccchh---hHhh----CChhhCCHHHH
Confidence 457889999999999998999999986421 11 1 245667777777754322 1223 34567999999
Q ss_pred HHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCE
Q 048639 1031 QRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGE 1109 (1139)
Q Consensus 1031 QrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ 1109 (1139)
||++|||||+.+|++|||||||++||+++...+.+.|++.. .+ +|||++||+++.+.+ ||||++|++|+
T Consensus 189 qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~---------~~-~tvIivsH~~~~~~~~~d~i~~L~~G~ 258 (286)
T PRK14275 189 QRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELR---------GS-YTIMIVTHNMQQASRVSDYTMFFYEGV 258 (286)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh---------cC-CeEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 99999999999999999999999999999999999999764 33 469999999999876 99999999999
Q ss_pred EEEecChhHHhhccCChHHH
Q 048639 1110 VVEMGSHSTLVAESQGVYSR 1129 (1139)
Q Consensus 1110 ive~G~~~eLl~~~~g~f~~ 1129 (1139)
+++.|+++++.+++...|.+
T Consensus 259 i~~~g~~~~~~~~~~~~~~~ 278 (286)
T PRK14275 259 LVEHAPTAQLFTNPKDRMTE 278 (286)
T ss_pred EEEeCCHHHHHhCCCcHHHH
Confidence 99999999998764444443
No 417
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=1.3e-40 Score=359.68 Aligned_cols=211 Identities=29% Similarity=0.462 Sum_probs=180.9
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcce
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNI 335 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 335 (1139)
.|+++|++++|++ +++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.+
T Consensus 7 ~i~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 83 (225)
T PRK10247 7 LLQLQNVGYLAGD---AKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIYRQQV 83 (225)
T ss_pred eEEEeccEEeeCC---ceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHHHhcc
Confidence 5999999999963 4599999999999999999999999999999999999999999999999999887777788899
Q ss_pred EEEecCCCCCcccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhCCCCCC-ccccccCCCCChHHHHHHHHHHHHcc
Q 048639 336 GAVSQEPSLFTGSLMDNIKVGNM--DADDEQIYNASMMANAHSFISQLPDQYS-TELGQRGVQLSGGQKQRIAIARAIVK 412 (1139)
Q Consensus 336 ~~v~Q~~~l~~~ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~i~~~g~~LSgGqkqRi~lARal~~ 412 (1139)
+|++|++.+|+.|++||+.++.. ....+ ...+.+.++.+ |+. +.....+.+||||||||++|||||++
T Consensus 84 ~~~~q~~~l~~~tv~enl~~~~~~~~~~~~-------~~~~~~~l~~~--~l~~~~~~~~~~~LS~G~~qrv~laral~~ 154 (225)
T PRK10247 84 SYCAQTPTLFGDTVYDNLIFPWQIRNQQPD-------PAIFLDDLERF--ALPDTILTKNIAELSGGEKQRISLIRNLQF 154 (225)
T ss_pred EEEecccccccccHHHHHHhHHhhcCCChH-------HHHHHHHHHHc--CCChHHhcCCcccCCHHHHHHHHHHHHHhc
Confidence 99999999998999999986421 01111 01123455555 443 45677889999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCCeEEEEecCccchhccCEEEEEe-CcEEEEecChh
Q 048639 413 NPPILLLDEATSALDSESEKLVQEALERAM--QGRTVILIAHRMSTIVNADMIAVVE-DGQVTETGTHH 478 (1139)
Q Consensus 413 ~~~illlDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~~~~~~~~d~i~~l~-~G~i~~~g~~~ 478 (1139)
+|+++||||||++||+.+...+.+.+.++. .++|+|++||+++.+..||++++|+ ++..+++|+|+
T Consensus 155 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~~~~~d~i~~l~~~~~~~~~~~~~ 223 (225)
T PRK10247 155 MPKVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQEARYE 223 (225)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHHHHhCCEEEEEecccchHhhhhhc
Confidence 999999999999999999999999998864 3789999999999998899999995 66777888875
No 418
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-40 Score=363.37 Aligned_cols=221 Identities=31% Similarity=0.475 Sum_probs=187.8
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccC-----CccEEEECCcccC-CCChH
Q 048639 885 RIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDP-----NEGIILIDGKGIK-EYNLR 958 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~-~~~l~ 958 (1139)
.++++|++++|++ .++|+|+||+|++||.+||+|+||||||||+++|.|+++| ++|+|.+||.++. ..+..
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~ 79 (249)
T PRK14253 3 KFNIENLDLFYGE---NQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVA 79 (249)
T ss_pred eEEEeccEEEECC---eeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchH
Confidence 4889999999963 4699999999999999999999999999999999999986 5999999999985 45667
Q ss_pred HHhhhceEEccccccccccHHHHhccCCC--cC-----CHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHH
Q 048639 959 RLRSQIGLVQQEPLLFSCSIRNNICYGNE--AA-----SEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQ 1031 (1139)
Q Consensus 959 ~lR~~i~~V~Qdp~LF~gTIreNL~~~~~--~~-----sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQ 1031 (1139)
.+|+.++|+||+|.+|..|+++|+.++.. .. .++++.++++.+++.+.+. .........|||||||
T Consensus 80 ~~~~~i~~~~q~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-------~~~~~~~~~LS~G~~q 152 (249)
T PRK14253 80 DLRIKVGMVFQKPNPFPMSIYENVAYGLRAQGIKDKKVLDEVVERSLRGAALWDEVK-------DRLKSHAFGLSGGQQQ 152 (249)
T ss_pred HHHhheeEEecCCCcCcccHHHHHHhHHHhcCCCchHHHHHHHHHHHHHcCCchhhh-------HHhhcCcccCCHHHHH
Confidence 78999999999999999999999986421 11 1234566777777765432 2223345679999999
Q ss_pred HHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEE
Q 048639 1032 RIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEV 1110 (1139)
Q Consensus 1032 rlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~i 1110 (1139)
|++|||||+.+|+||||||||++||+.+...+.+.|++.. ++ +|+|++||+++.+.. ||||++|++|++
T Consensus 153 rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~---------~~-~tii~~sh~~~~~~~~~d~i~~l~~G~i 222 (249)
T PRK14253 153 RLCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELK---------KN-YTIVIVTHSMQQARRISDRTAFFLMGEL 222 (249)
T ss_pred HHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh---------cC-CeEEEEecCHHHHHHhCCEEEEEECCEE
Confidence 9999999999999999999999999999999999999864 33 569999999999887 999999999999
Q ss_pred EEecChhHHhhccCC
Q 048639 1111 VEMGSHSTLVAESQG 1125 (1139)
Q Consensus 1111 ve~G~~~eLl~~~~g 1125 (1139)
++.|+++++.+++..
T Consensus 223 ~~~g~~~~~~~~~~~ 237 (249)
T PRK14253 223 VEHDDTQVIFSNPKD 237 (249)
T ss_pred EEeCCHHHHHcCCCC
Confidence 999999998765433
No 419
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-40 Score=366.49 Aligned_cols=217 Identities=34% Similarity=0.518 Sum_probs=180.8
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccC-----CCccEEEECCccCCC--CCH
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYD-----PSNGDILIDSLNIKD--LDL 328 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~-----~~~G~i~~~g~~~~~--~~~ 328 (1139)
.|+++|++|+|++ +++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|+++.. .+.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~ 80 (251)
T PRK14251 4 IISAKDVHLSYGN---YEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDL 80 (251)
T ss_pred eEEEEeeEEEECC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchH
Confidence 4899999999963 469999999999999999999999999999999999997 489999999998854 344
Q ss_pred HHHhcceEEEecCCCCCcccHHHHHhcCCCC--CC-HHHHHHHHHHhcHHHHHHhCCCCC----CccccccCCCCChHHH
Q 048639 329 KSLRKNIGAVSQEPSLFTGSLMDNIKVGNMD--AD-DEQIYNASMMANAHSFISQLPDQY----STELGQRGVQLSGGQK 401 (1139)
Q Consensus 329 ~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~--~~-~~~~~~~~~~~~~~~~i~~l~~g~----~t~i~~~g~~LSgGqk 401 (1139)
..+++.++|++|++.+|+.|++||+.++... .. .+...+ .+.+.++.+ |+ .......+.+||||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~~~~~LS~Gq~ 153 (251)
T PRK14251 81 VELRKEVGMVFQQPTPFPFSVYDNVAYGLKIAGVKDKELIDQ-----RVEESLKQA--AIWKETKDNLDRNAQAFSGGQQ 153 (251)
T ss_pred HHhhccEEEEecCCccCCCcHHHHHHHHHHHcCCCCHHHHHH-----HHHHHHHHc--CCCcchHHHhccChhhCCHHHH
Confidence 5678889999999999999999999875321 11 111111 111223322 22 1234567789999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhh
Q 048639 402 QRIAIARAIVKNPPILLLDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSL 480 (1139)
Q Consensus 402 qRi~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l 480 (1139)
||++|||||+++|+++||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 154 qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 233 (251)
T PRK14251 154 QRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKHQYTFIMVTHNLQQAGRISDQTAFLMNGDLIEAGPTEEM 233 (251)
T ss_pred HHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHcCCeEEEEECCHHHHHhhcCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988778999999999999876 999999999999999999987
Q ss_pred hc
Q 048639 481 LQ 482 (1139)
Q Consensus 481 ~~ 482 (1139)
..
T Consensus 234 ~~ 235 (251)
T PRK14251 234 FI 235 (251)
T ss_pred Hh
Confidence 64
No 420
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-40 Score=358.81 Aligned_cols=211 Identities=31% Similarity=0.530 Sum_probs=183.8
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhce
Q 048639 886 IEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQIG 965 (1139)
Q Consensus 886 I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~ 965 (1139)
|+++||+++|+. . ..|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+. .+++++
T Consensus 2 l~~~~l~~~~~~---~--~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i~ 74 (232)
T PRK10771 2 LKLTDITWLYHH---L--PMRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPASGSLTLNGQDHTTTPP--SRRPVS 74 (232)
T ss_pred eEEEEEEEEECC---c--cceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCeecCcCCh--hhccEE
Confidence 789999999963 2 238999999999999999999999999999999999999999999999886654 357899
Q ss_pred EEccccccccc-cHHHHhccCC-Cc-----CCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 048639 966 LVQQEPLLFSC-SIRNNICYGN-EA-----ASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIART 1038 (1139)
Q Consensus 966 ~V~Qdp~LF~g-TIreNL~~~~-~~-----~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalARA 1038 (1139)
|+||++.+|.+ |+++|+.++. +. ..++++.++++.+++.+++.+.| ..||||||||++||||
T Consensus 75 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~lara 143 (232)
T PRK10771 75 MLFQENNLFSHLTVAQNIGLGLNPGLKLNAAQREKLHAIARQMGIEDLLARLP-----------GQLSGGQRQRVALARC 143 (232)
T ss_pred EEecccccccCCcHHHHHhcccccccCCCHHHHHHHHHHHHHcCcHHHHhCCc-----------ccCCHHHHHHHHHHHH
Confidence 99999999975 9999998642 11 22456888999999988776655 3699999999999999
Q ss_pred hcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEEEecChh
Q 048639 1039 LLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVVEMGSHS 1117 (1139)
Q Consensus 1039 Llr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~ 1117 (1139)
++++|++|||||||++||+++.+.+.+.|++... ..++|+|++||+++.+.. ||+|++|++|++++.|+++
T Consensus 144 l~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~--------~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~~~ 215 (232)
T PRK10771 144 LVREQPILLLDEPFSALDPALRQEMLTLVSQVCQ--------ERQLTLLMVSHSLEDAARIAPRSLVVADGRIAWDGPTD 215 (232)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH--------hcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 9999999999999999999999999999987641 224569999999999876 9999999999999999999
Q ss_pred HHhhc
Q 048639 1118 TLVAE 1122 (1139)
Q Consensus 1118 eLl~~ 1122 (1139)
++...
T Consensus 216 ~~~~~ 220 (232)
T PRK10771 216 ELLSG 220 (232)
T ss_pred HHHhC
Confidence 99864
No 421
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-40 Score=365.98 Aligned_cols=221 Identities=31% Similarity=0.495 Sum_probs=183.3
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccC-----CCccEEEECCccCCC--CCH
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYD-----PSNGDILIDSLNIKD--LDL 328 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~-----~~~G~i~~~g~~~~~--~~~ 328 (1139)
.++++|++++|++ +++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|+++.. .+.
T Consensus 24 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 100 (271)
T PRK14238 24 VFDTQNLNLWYGE---DHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRDQNIFDKSYSV 100 (271)
T ss_pred EEEEeeeEEEECC---cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECCEEcccccccH
Confidence 5999999999963 359999999999999999999999999999999999987 699999999998853 345
Q ss_pred HHHhcceEEEecCCCCCcccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhC--CCCCCccccccCCCCChHHHHHH
Q 048639 329 KSLRKNIGAVSQEPSLFTGSLMDNIKVGNM--DADDEQIYNASMMANAHSFISQL--PDQYSTELGQRGVQLSGGQKQRI 404 (1139)
Q Consensus 329 ~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l--~~g~~t~i~~~g~~LSgGqkqRi 404 (1139)
..++++++|++|++.+|..|++||+.++.. ...+++..+ ..+.+.++.+ .+++.......+.+||||||||+
T Consensus 101 ~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~----~~~~~~l~~~~~~~~l~~~~~~~~~~LSgGe~qrv 176 (271)
T PRK14238 101 EELRTNVGMVFQKPNPFPKSIYDNVTYGPKIHGIKDKKTLD----EIVEKSLRGAAIWDELKDRLHDNAYGLSGGQQQRL 176 (271)
T ss_pred HHHhhhEEEEecCCccccccHHHHHHHHHHhcCCCcHHHHH----HHHHHHHHHcCCcchHHHHHhcCcccCCHHHHHHH
Confidence 567889999999999998999999987532 111111111 0111222222 11233445677889999999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhcc
Q 048639 405 AIARAIVKNPPILLLDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQT 483 (1139)
Q Consensus 405 ~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 483 (1139)
+|||||+.+|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++...
T Consensus 177 ~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~~~~~~~ 256 (271)
T PRK14238 177 CIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKKDYSIIIVTHNMQQAARISDKTAFFLNGYVNEYDDTDKIFSN 256 (271)
T ss_pred HHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEeCCHHHHHcC
Confidence 9999999999999999999999999999999999988778999999999999875 999999999999999999988653
No 422
>COG4178 ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]
Probab=100.00 E-value=9.4e-38 Score=363.07 Aligned_cols=411 Identities=17% Similarity=0.185 Sum_probs=321.8
Q ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhH---------------HHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 39 TGVSSHMSVIRDAIGEKLGHFLSSFATFFSGVLIAVICCW---------------EVSLLIFLVVPMILVIGATYTKRMN 103 (1139)
Q Consensus 39 ~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---------------~l~l~~l~~~~~~~~~~~~~~~~~~ 103 (1139)
.|++.|+....+........++.++++++...+++.-++- .+..++++.+++.-++..+++|.+.
T Consensus 152 QRi~eDi~~~t~~t~~l~~g~l~s~islisF~~iLw~lsg~~~~~~~g~~~~I~g~mv~~~i~Ya~~~s~~~~~iGr~Li 231 (604)
T COG4178 152 QRIQEDIRNFTETTLDLSFGLLQSVISLISFTGILWSLSGGLAFTIGGFSFGIPGYMVWAVIIYAISASLLTHLIGRPLI 231 (604)
T ss_pred HhHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHccCcceEeecccccccchHHHHHHHHHHHHHHHHHHHHccccc
Confidence 6999999999998888888888887776665555542211 1223333344444466778889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048639 104 AVSATKLLYLSEATSMIEQTISQIKTVFAFVGERSEIKSFSDCMDKQIIISRGEALIKGVGLGMFQSVTFCCWALIIWVG 183 (1139)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 183 (1139)
+..-+..+..+..-..+...-.+...|-.|+.|+.+.++.++......+...+..........+......++.++-+.++
T Consensus 232 ~LN~~~~~~EA~fR~~Lvrv~enaE~IAly~GE~~Er~~l~~~f~~v~~n~~~l~~~~~~l~~~~~gy~~~s~v~P~li~ 311 (604)
T COG4178 232 RLNFERQKLEADFRYSLVRVRENAEAIALYRGEKVERRRLDDRFDAVLGNWRRLVRAQIRLTWFQLGYGWLSVVLPILIA 311 (604)
T ss_pred cccHHHHHHHHHHHHHHHHHHhhHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhHHHHHHHHHhc
Confidence 99888888899999999999999999999999999988877776666554444333332222222223333334444556
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-----CCccCCCCcc---ccCCCc
Q 048639 184 AVVVTAKRSTGGEVLAAVMSILFGAIALTYAAPDMQVFNQAKAAGFEIFQVIQRKP-----RISYSSKGKE---LEKIDG 255 (1139)
Q Consensus 184 ~~~v~~~~l~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ri~~~l~~~~-----~~~~~~~~~~---~~~~~~ 255 (1139)
+.....|.++.|.+......+......++.+...+..+..-++...|+.++.+.-+ .......... ....+.
T Consensus 312 ap~~f~g~i~~G~lmqa~~aF~~v~sslswfi~~~~~ia~~rA~~~Rl~~f~~ai~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (604)
T COG4178 312 APRYFSGQITFGGLMQAVGAFGQVHSSLSWFIDNYDAIADWRATLLRLAEFRQALEAAQMDTEKPARTGRRIDFDDNADH 391 (604)
T ss_pred cHhhhcCcChHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccCcccccCcccccccccccccc
Confidence 66678999999999998888888888888888899999999999999998864321 1111110000 011146
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcce
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNI 335 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 335 (1139)
.|+++|++..-|+. .+.+++.+|++++||.+.|.||||||||||+++|+|++|--+|+|..-. ...+
T Consensus 392 ~i~~~nl~l~~p~~--~~ll~~l~~~v~~G~~llI~G~SG~GKTsLlRaiaGLWP~g~G~I~~P~-----------~~~~ 458 (604)
T COG4178 392 GITLENLSLRTPDG--QTLLSELNFEVRPGERLLITGESGAGKTSLLRALAGLWPWGSGRISMPA-----------DSAL 458 (604)
T ss_pred eeEEeeeeEECCCC--CeeeccceeeeCCCCEEEEECCCCCCHHHHHHHHhccCccCCCceecCC-----------CCce
Confidence 79999999998754 4789999999999999999999999999999999999999999997752 1358
Q ss_pred EEEecCCCCCcccHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHccC
Q 048639 336 GAVSQEPSLFTGSLMDNIKVGNMD--ADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVKN 413 (1139)
Q Consensus 336 ~~v~Q~~~l~~~ti~~ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~~ 413 (1139)
-|+||.|++-.||.||-|++.+.. .+++++.+++.++++.+.++++.+-. .=...||+|||||+|+||.|+++
T Consensus 459 lflpQ~PY~p~GtLre~l~YP~~~~~~~d~~l~~vL~~vgL~~L~~rl~~~~-----~W~~vLS~GEqQRlafARilL~k 533 (604)
T COG4178 459 LFLPQRPYLPQGTLREALCYPNAAPDFSDAELVAVLHKVGLGDLAERLDEED-----RWDRVLSGGEQQRLAFARLLLHK 533 (604)
T ss_pred EEecCCCCCCCccHHHHHhCCCCCCCCChHHHHHHHHHcCcHHHHHHHhccC-----cHhhhcChhHHHHHHHHHHHHcC
Confidence 999999999999999999998764 78999999999999999999875422 23467999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhccCEEEEEe
Q 048639 414 PPILLLDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVNADMIAVVE 467 (1139)
Q Consensus 414 ~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~ 467 (1139)
|++++|||+|||||++++..+.+.+++...+.|+|-|.||.......++.+-+.
T Consensus 534 P~~v~LDEATsALDe~~e~~l~q~l~~~lp~~tvISV~Hr~tl~~~h~~~l~l~ 587 (604)
T COG4178 534 PKWVFLDEATSALDEETEDRLYQLLKEELPDATVISVGHRPTLWNFHSRQLELL 587 (604)
T ss_pred CCEEEEecchhccChHHHHHHHHHHHhhCCCCEEEEeccchhhHHHHhhheeec
Confidence 999999999999999999999999999888999999999998877766655554
No 423
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-40 Score=365.17 Aligned_cols=219 Identities=32% Similarity=0.513 Sum_probs=184.8
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccC-----CccEEEECCcccCC--CCh
Q 048639 885 RIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDP-----NEGIILIDGKGIKE--YNL 957 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~~--~~l 957 (1139)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+.
T Consensus 4 ~l~i~~v~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~ 80 (258)
T PRK14241 4 RIDVKDLNIYYGS---FHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDP 80 (258)
T ss_pred cEEEeeEEEEECC---EeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccCh
Confidence 4899999999963 3699999999999999999999999999999999999974 69999999999853 445
Q ss_pred HHHhhhceEEcccccccc-ccHHHHhccCCC-------cCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHH
Q 048639 958 RRLRSQIGLVQQEPLLFS-CSIRNNICYGNE-------AASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQ 1029 (1139)
Q Consensus 958 ~~lR~~i~~V~Qdp~LF~-gTIreNL~~~~~-------~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQ 1029 (1139)
..+|+.++|++|++.+|. .|+++|+.++.. ...++.+.++++.+++.+.+.. .......+|||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G~ 153 (258)
T PRK14241 81 VAVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNGVRNKKDLDELVEKSLRGANLWNEVKD-------RLDKPGGGLSGGQ 153 (258)
T ss_pred HHHhcceEEEccccccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhh-------HhhCCcccCCHHH
Confidence 678899999999999987 599999975321 1123456777888887544321 2233456799999
Q ss_pred HHHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEe--
Q 048639 1030 KQRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMD-- 1106 (1139)
Q Consensus 1030 rQrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~-- 1106 (1139)
|||++|||||+++|++|||||||++||+.+...+.+.|++.. .+ +|+|+|||+++.+.. ||||++|+
T Consensus 154 ~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~---------~~-~tviivsH~~~~~~~~~d~i~~l~~~ 223 (258)
T PRK14241 154 QQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELK---------QD-YTIVIVTHNMQQAARVSDQTAFFNLE 223 (258)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHh---------cC-CEEEEEecCHHHHHHhCCEEEEEecc
Confidence 999999999999999999999999999999999999999764 33 469999999999865 99999996
Q ss_pred ----CCEEEEecChhHHhhcc
Q 048639 1107 ----KGEVVEMGSHSTLVAES 1123 (1139)
Q Consensus 1107 ----~G~ive~G~~~eLl~~~ 1123 (1139)
+|+|++.|++++++..+
T Consensus 224 ~~~~~g~i~~~~~~~~~~~~~ 244 (258)
T PRK14241 224 ATGKPGRLVEIDDTEKIFSNP 244 (258)
T ss_pred cCCCCceEEecCCHHHHHhCc
Confidence 89999999999998653
No 424
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-40 Score=376.02 Aligned_cols=221 Identities=25% Similarity=0.363 Sum_probs=179.4
Q ss_pred cEEEEeEEEECCCCCC-CccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccC----CCccEEEECCccCCCCCHHH
Q 048639 256 NIDIRDVCFAYPSRPD-QLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYD----PSNGDILIDSLNIKDLDLKS 330 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~-~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~----~~~G~i~~~g~~~~~~~~~~ 330 (1139)
.++++|++++|+.... ..+|+||||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|+++..++.+.
T Consensus 3 ~L~v~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~ 82 (326)
T PRK11022 3 LLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKE 82 (326)
T ss_pred eEEEeCeEEEECCCCccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHH
Confidence 3799999999975321 359999999999999999999999999999999999998 48999999999998887665
Q ss_pred Hh----cceEEEecCCC--CCc-ccHHHHHhcCC---CCCCHHHHHHHHHHhcHHHHHHhCCCCCC---ccccccCCCCC
Q 048639 331 LR----KNIGAVSQEPS--LFT-GSLMDNIKVGN---MDADDEQIYNASMMANAHSFISQLPDQYS---TELGQRGVQLS 397 (1139)
Q Consensus 331 ~~----~~i~~v~Q~~~--l~~-~ti~~ni~~g~---~~~~~~~~~~~~~~~~~~~~i~~l~~g~~---t~i~~~g~~LS 397 (1139)
++ +.|+||||+|. +.+ .|+.+++.... .....++. ...+.+.++.+ |++ ...+..+.+||
T Consensus 83 ~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~~~~~~~~-----~~~~~~~L~~~--gL~~~~~~l~~~p~~LS 155 (326)
T PRK11022 83 RRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKKTR-----RQRAIDLLNQV--GIPDPASRLDVYPHQLS 155 (326)
T ss_pred HHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhcCCCHHHH-----HHHHHHHHHHC--CCCChHHHHhCCchhCC
Confidence 43 37999999995 443 36666554211 01111111 11223445554 332 34567889999
Q ss_pred hHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CCeEEEEecCccchhc-cCEEEEEeCcEEEEe
Q 048639 398 GGQKQRIAIARAIVKNPPILLLDEATSALDSESEKLVQEALERAMQ--GRTVILIAHRMSTIVN-ADMIAVVEDGQVTET 474 (1139)
Q Consensus 398 gGqkqRi~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~ 474 (1139)
||||||++|||||+.+|++||+||||++||+.++..+.+.|+++.+ +.|+|+|||+++.+.. ||+|++|.+|+|++.
T Consensus 156 gGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~~~~~~adri~vm~~G~ive~ 235 (326)
T PRK11022 156 GGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVET 235 (326)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEE
Confidence 9999999999999999999999999999999999999999998753 7899999999999865 999999999999999
Q ss_pred cChhhhhcc
Q 048639 475 GTHHSLLQT 483 (1139)
Q Consensus 475 g~~~~l~~~ 483 (1139)
|+.+++.++
T Consensus 236 g~~~~~~~~ 244 (326)
T PRK11022 236 GKAHDIFRA 244 (326)
T ss_pred CCHHHHhhC
Confidence 999999864
No 425
>cd03246 ABCC_Protease_Secretion This family represents the ABC component of the protease secretion system PrtD, a 60-kDa integral membrane protein sharing 37% identity with HlyB, the ABC component of the alpha-hemolysin secretion pathway, in the C-terminal domain. They export degradative enzymes by using a type I protein secretion system and lack an N-terminal signal peptide, but contain a C-terminal secretion signal. The Type I secretion apparatus is made up of three components, an ABC transporter, a membrane fusion protein (MFP), and an outer membrane protein (OMP). For the HlyA transporter complex, HlyB (ABC transporter) and HlyD (MFP) reside in the inner membrane of E. coli. The OMP component is TolC, which is thought to interact with the MFP to form a continuous channel across the periplasm from the cytoplasm to the exterior. HlyB belongs to the family of ABC transporters, which are ubiquitous, ATP-dependent transmembrane pumps or channels. The spectrum of transport substra
Probab=100.00 E-value=1.7e-40 Score=343.35 Aligned_cols=173 Identities=43% Similarity=0.747 Sum_probs=161.2
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhce
Q 048639 886 IEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQIG 965 (1139)
Q Consensus 886 I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~ 965 (1139)
|+++|++++|++. ..++++++||+|++||.++|+|+||||||||+++|.|+++|++|+|.+||.++.+.+...+|++++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (173)
T cd03246 1 LEVENVSFRYPGA-EPPVLRNVSFSIEPGESLAIIGPSGSGKSTLARLILGLLRPTSGRVRLDGADISQWDPNELGDHVG 79 (173)
T ss_pred CEEEEEEEEcCCC-CCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEEcccCCHHHHHhheE
Confidence 5789999999742 246999999999999999999999999999999999999999999999999999988888999999
Q ss_pred EEccccccccccHHHHhccCCCcCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhcCCCCE
Q 048639 966 LVQQEPLLFSCSIRNNICYGNEAASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIARTLLKRPAI 1045 (1139)
Q Consensus 966 ~V~Qdp~LF~gTIreNL~~~~~~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalARALlr~p~I 1045 (1139)
|++|+|.+|++|+++|+ ||||||||++|||||+++|++
T Consensus 80 ~~~q~~~~~~~tv~~~l------------------------------------------LS~G~~qrv~la~al~~~p~~ 117 (173)
T cd03246 80 YLPQDDELFSGSIAENI------------------------------------------LSGGQRQRLGLARALYGNPRI 117 (173)
T ss_pred EECCCCccccCcHHHHC------------------------------------------cCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999998 999999999999999999999
Q ss_pred EEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhcCCEEEEEeCCEE
Q 048639 1046 MLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVINSDVIVVMDKGEV 1110 (1139)
Q Consensus 1046 LlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~~DrI~vl~~G~i 1110 (1139)
|||||||++||+.+...+.+.|++.. ++++|+|+++|+++.+..||+|++|++|++
T Consensus 118 lllDEPt~~LD~~~~~~l~~~l~~~~---------~~~~tii~~sh~~~~~~~~d~v~~l~~G~i 173 (173)
T cd03246 118 LVLDEPNSHLDVEGERALNQAIAALK---------AAGATRIVIAHRPETLASADRILVLEDGRV 173 (173)
T ss_pred EEEECCccccCHHHHHHHHHHHHHHH---------hCCCEEEEEeCCHHHHHhCCEEEEEECCCC
Confidence 99999999999999999999998764 334569999999999988999999999974
No 426
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-40 Score=364.85 Aligned_cols=217 Identities=32% Similarity=0.502 Sum_probs=181.7
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccC-----CCccEEEECCccCCC--CCH
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYD-----PSNGDILIDSLNIKD--LDL 328 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~-----~~~G~i~~~g~~~~~--~~~ 328 (1139)
.|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|+++.. .+.
T Consensus 10 ~l~i~~v~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 86 (264)
T PRK14243 10 VLRTENLNVYYGS---FLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAPDVDP 86 (264)
T ss_pred EEEEeeeEEEECC---EEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEccccccCh
Confidence 5899999999963 369999999999999999999999999999999999986 489999999998853 345
Q ss_pred HHHhcceEEEecCCCCCcccHHHHHhcCCCCC--C---HHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHH
Q 048639 329 KSLRKNIGAVSQEPSLFTGSLMDNIKVGNMDA--D---DEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQR 403 (1139)
Q Consensus 329 ~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~~--~---~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqR 403 (1139)
..++++++|++|++.+|+.|++||+.++.... . .+++.++++..++.+.+ ....+..+.+||||||||
T Consensus 87 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-------~~~~~~~~~~LSgGq~qr 159 (264)
T PRK14243 87 VEVRRRIGMVFQKPNPFPKSIYDNIAYGARINGYKGDMDELVERSLRQAALWDEV-------KDKLKQSGLSLSGGQQQR 159 (264)
T ss_pred HHHhhhEEEEccCCccccccHHHHHHhhhhhcCcchHHHHHHHHHHHHhCchhhH-------HHHhcCCcccCCHHHHHH
Confidence 66788999999999999889999998764211 1 11222222332222222 223456788999999999
Q ss_pred HHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhc-cCEEEEEe---------CcEEEE
Q 048639 404 IAIARAIVKNPPILLLDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVN-ADMIAVVE---------DGQVTE 473 (1139)
Q Consensus 404 i~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~---------~G~i~~ 473 (1139)
++|||||+.+|++|||||||++||+.+...+.+.|.++.+++|+|++||+++.+.. ||+|++|+ +|++++
T Consensus 160 v~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tvi~vtH~~~~~~~~~d~v~~l~~~~~~~~~~~g~i~~ 239 (264)
T PRK14243 160 LCIARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKEQYTIIIVTHNMQQAARVSDMTAFFNVELTEGGGRYGYLVE 239 (264)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccccccccCceEEE
Confidence 99999999999999999999999999999999999988777899999999999876 99999998 899999
Q ss_pred ecChhhhhc
Q 048639 474 TGTHHSLLQ 482 (1139)
Q Consensus 474 ~g~~~~l~~ 482 (1139)
.|+++++.+
T Consensus 240 ~~~~~~~~~ 248 (264)
T PRK14243 240 FDRTEKIFN 248 (264)
T ss_pred eCCHHHHHh
Confidence 999999864
No 427
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=1.5e-41 Score=333.23 Aligned_cols=223 Identities=24% Similarity=0.454 Sum_probs=189.1
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHH-Hhcc
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKS-LRKN 334 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~-~~~~ 334 (1139)
.+..+|+.++|.+ ++++++|||++++||+|++.||||+||||.+.++.|+.+|++|+|.+||.|+..++... -|..
T Consensus 4 ~L~a~~l~K~y~k---r~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d~G~i~ld~~diT~lPm~~RArlG 80 (243)
T COG1137 4 TLVAENLAKSYKK---RKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPDSGKILLDDEDITKLPMHKRARLG 80 (243)
T ss_pred EEEehhhhHhhCC---eeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecCCceEEECCcccccCChHHHhhcC
Confidence 5889999999964 46999999999999999999999999999999999999999999999999999998765 4668
Q ss_pred eEEEecCCCCCcc-cHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHccC
Q 048639 335 IGAVSQEPSLFTG-SLMDNIKVGNMDADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVKN 413 (1139)
Q Consensus 335 i~~v~Q~~~l~~~-ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~~ 413 (1139)
|||+||+|.+|.+ ||+|||..-.+- .+.....+.....+++.++.+ ++...-...+..||||||+|+.|||||..+
T Consensus 81 igYLpQE~SIFr~LtV~dNi~~vlE~-~~~d~~~~~~~~~l~~LL~ef--~i~hlr~~~a~sLSGGERRR~EIARaLa~~ 157 (243)
T COG1137 81 IGYLPQEASIFRKLTVEDNIMAVLEI-REKDLKKAERKEELDALLEEF--HITHLRDSKAYSLSGGERRRVEIARALAAN 157 (243)
T ss_pred cccccccchHhhcCcHHHHHHHHHhh-hhcchhHHHHHHHHHHHHHHh--chHHHhcCcccccccchHHHHHHHHHHhcC
Confidence 9999999999976 999999865321 111112223333334455555 445556778899999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCCeEEEEecCccc-hhccCEEEEEeCcEEEEecChhhhhccc
Q 048639 414 PPILLLDEATSALDSESEKLVQEALERAM-QGRTVILIAHRMST-IVNADMIAVVEDGQVTETGTHHSLLQTS 484 (1139)
Q Consensus 414 ~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~~~~-~~~~d~i~~l~~G~i~~~g~~~~l~~~~ 484 (1139)
|+.++||||+|++||.+-..|++.++.+. +|--|++.-|+..+ +.-|||.+++.+|++..+|+++|+.+++
T Consensus 158 P~fiLLDEPFAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVREtL~i~dRaYIi~~G~vla~G~p~ei~~n~ 230 (243)
T COG1137 158 PKFILLDEPFAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVRETLDICDRAYIISDGKVLAEGSPEEIVNNE 230 (243)
T ss_pred CCEEEecCCccCCCchhHHHHHHHHHHHHhCCceEEEccccHHHHHhhhheEEEEecCeEEecCCHHHHhcCh
Confidence 99999999999999999999999998876 47888888899865 5669999999999999999999998754
No 428
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=1.5e-40 Score=357.29 Aligned_cols=206 Identities=31% Similarity=0.490 Sum_probs=171.5
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCH---HHHhc
Q 048639 257 IDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDL---KSLRK 333 (1139)
Q Consensus 257 i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~---~~~~~ 333 (1139)
++++|++++|++. +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. ..+++
T Consensus 1 l~~~~l~~~~~~~--~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 78 (214)
T cd03292 1 IEFINVTKTYPNG--TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPYLRR 78 (214)
T ss_pred CEEEEEEEEeCCC--ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHHH
Confidence 4689999999642 469999999999999999999999999999999999999999999999999876654 34678
Q ss_pred ceEEEecCCCCCcc-cHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHH
Q 048639 334 NIGAVSQEPSLFTG-SLMDNIKVGNM--DADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAI 410 (1139)
Q Consensus 334 ~i~~v~Q~~~l~~~-ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal 410 (1139)
.++|++|++.+|+. |++||+.++.. ....++..+ .+.+.++.+ |++........+||||||||++|||||
T Consensus 79 ~i~~v~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral 151 (214)
T cd03292 79 KIGVVFQDFRLLPDRNVYENVAFALEVTGVPPREIRK-----RVPAALELV--GLSHKHRALPAELSGGEQQRVAIARAI 151 (214)
T ss_pred heEEEecCchhccCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CCHHHhhCChhhcCHHHHHHHHHHHHH
Confidence 89999999999875 99999987532 111221111 122334443 344445566779999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCCeEEEEecCccchhc-cCEEEEEeCcEE
Q 048639 411 VKNPPILLLDEATSALDSESEKLVQEALERAM-QGRTVILIAHRMSTIVN-ADMIAVVEDGQV 471 (1139)
Q Consensus 411 ~~~~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i 471 (1139)
+.+|+++||||||++||+.+.+.+.+.|+++. +++|+|++||+++.+.. ||++++|++|++
T Consensus 152 ~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 152 VNSPTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred HcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999998874 58999999999999976 999999999974
No 429
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=3.3e-40 Score=358.46 Aligned_cols=210 Identities=31% Similarity=0.504 Sum_probs=172.4
Q ss_pred EEEEeEEEECCCCC-CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCCh---HHHh
Q 048639 886 IEFQNIKFNYPSRP-EVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNL---RRLR 961 (1139)
Q Consensus 886 I~~~nvsf~Y~~~~-~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l---~~lR 961 (1139)
|+++||+++|+++. +.++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+. ..+|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (228)
T cd03257 2 LEVKNLSVSFPTGGGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPTSGSIIFDGKDLLKLSRRLRKIRR 81 (228)
T ss_pred eEEEeeeEeccCCCcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccchhhHHHhh
Confidence 78999999996431 1269999999999999999999999999999999999999999999999999988764 5778
Q ss_pred hhceEEcccc--ccc-cccHHHHhccCC----CcCCHHHH----HHHHHHcCchHHHhhCCCCccccccCCCCCCChHHH
Q 048639 962 SQIGLVQQEP--LLF-SCSIRNNICYGN----EAASEAEI----VEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQK 1030 (1139)
Q Consensus 962 ~~i~~V~Qdp--~LF-~gTIreNL~~~~----~~~sd~ei----~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQr 1030 (1139)
++++|+||+| .++ ..|+++|+.++. +...+++. .++++..++.+ ........+||||||
T Consensus 82 ~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~----------~~~~~~~~~LS~G~~ 151 (228)
T cd03257 82 KEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKLSKKEARKEAVLLLLVGVGLPE----------EVLNRYPHELSGGQR 151 (228)
T ss_pred ccEEEEecCchhhcCCcCCHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHCCCCh----------hHhhCCchhcCHHHH
Confidence 8999999999 344 579999997531 11111211 24555555521 122334467999999
Q ss_pred HHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCC-CeEEEEEecCchhhhc-CCEEEEEeCC
Q 048639 1031 QRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELAS-RTTQITVAHRLATVIN-SDVIVVMDKG 1108 (1139)
Q Consensus 1031 QrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~-~tTvI~IaHrl~ti~~-~DrI~vl~~G 1108 (1139)
||++|||||+.+|+||||||||++||+.+.+.+.+.|++.. ++ ++|||++||+++.+.. ||+|++|++|
T Consensus 152 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~---------~~~~~tii~~sH~~~~~~~~~d~i~~l~~G 222 (228)
T cd03257 152 QRVAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQ---------EELGLTLLFITHDLGVVAKIADRVAVMYAG 222 (228)
T ss_pred HHHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHH---------HHcCCEEEEEeCCHHHHHHhcCeEEEEeCC
Confidence 99999999999999999999999999999999999999764 22 4569999999999985 9999999999
Q ss_pred EEEEec
Q 048639 1109 EVVEMG 1114 (1139)
Q Consensus 1109 ~ive~G 1114 (1139)
++++.|
T Consensus 223 ~i~~~g 228 (228)
T cd03257 223 KIVEEG 228 (228)
T ss_pred EEEecC
Confidence 998865
No 430
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=1.7e-40 Score=358.72 Aligned_cols=212 Identities=25% Similarity=0.426 Sum_probs=181.8
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhc
Q 048639 885 RIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQI 964 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i 964 (1139)
.|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 7 ~i~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 83 (225)
T PRK10247 7 LLQLQNVGYLAGD---AKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIYRQQV 83 (225)
T ss_pred eEEEeccEEeeCC---ceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHHHhcc
Confidence 4999999999963 3699999999999999999999999999999999999999999999999999988888889999
Q ss_pred eEEccccccccccHHHHhccCC---C-cCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhc
Q 048639 965 GLVQQEPLLFSCSIRNNICYGN---E-AASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIARTLL 1040 (1139)
Q Consensus 965 ~~V~Qdp~LF~gTIreNL~~~~---~-~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalARALl 1040 (1139)
+|+||+|.+|+.|+++|+.++. . ...++++.++++..++.+. .......+||||||||++|||||+
T Consensus 84 ~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~l~~~----------~~~~~~~~LS~G~~qrv~laral~ 153 (225)
T PRK10247 84 SYCAQTPTLFGDTVYDNLIFPWQIRNQQPDPAIFLDDLERFALPDT----------ILTKNIAELSGGEKQRISLIRNLQ 153 (225)
T ss_pred EEEecccccccccHHHHHHhHHhhcCCChHHHHHHHHHHHcCCChH----------HhcCCcccCCHHHHHHHHHHHHHh
Confidence 9999999999999999997531 1 1123456677777777421 122344679999999999999999
Q ss_pred CCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhcCCEEEEEe-CCEEEEecChh
Q 048639 1041 KRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVINSDVIVVMD-KGEVVEMGSHS 1117 (1139)
Q Consensus 1041 r~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~~DrI~vl~-~G~ive~G~~~ 1117 (1139)
++|++|||||||++||+.+...+.+.|++... ..++|+|++||+++.+..||+|++|+ ++..+++|+|+
T Consensus 154 ~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--------~~~~tvii~sh~~~~~~~~d~i~~l~~~~~~~~~~~~~ 223 (225)
T PRK10247 154 FMPKVLLLDEITSALDESNKHNVNEIIHRYVR--------EQNIAVLWVTHDKDEINHADKVITLQPHAGEMQEARYE 223 (225)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH--------hcCCEEEEEECChHHHHhCCEEEEEecccchHhhhhhc
Confidence 99999999999999999999999999997641 22456999999999998899999995 67777888885
No 431
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=4.8e-40 Score=353.98 Aligned_cols=210 Identities=28% Similarity=0.479 Sum_probs=182.5
Q ss_pred EEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCH----HHHhc
Q 048639 258 DIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDL----KSLRK 333 (1139)
Q Consensus 258 ~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~----~~~~~ 333 (1139)
.+.|+.|+|++. .++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. ...|+
T Consensus 2 ~~~~~~~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 79 (218)
T cd03290 2 QVTNGYFSWGSG--LATLSNINIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQTLEGKVHWSNKNESEPSFEATRSRNRY 79 (218)
T ss_pred eeeeeEEecCCC--CcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCcccccccccccchhhcc
Confidence 467999999743 469999999999999999999999999999999999999999999999998765432 23567
Q ss_pred ceEEEecCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHccC
Q 048639 334 NIGAVSQEPSLFTGSLMDNIKVGNMDADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVKN 413 (1139)
Q Consensus 334 ~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~~ 413 (1139)
.++|++|+|.+|+.|++||+.++.+ ...++..++++..++.+.+..+|.|+++.++..+.+||||||||++||||++.+
T Consensus 80 ~i~~~~q~~~~~~~t~~~nl~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~qrv~laral~~~ 158 (218)
T cd03290 80 SVAYAAQKPWLLNATVEENITFGSP-FNKQRYKAVTDACSLQPDIDLLPFGDQTEIGERGINLSGGQRQRICVARALYQN 158 (218)
T ss_pred eEEEEcCCCccccccHHHHHhhcCc-CCHHHHHHHHHHhCcHHHHHhCcCccccCcccCCCcCCHHHHHHHHHHHHHhhC
Confidence 8999999999998899999998653 234455566666666777888899999999999999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHhHHHHHH--HHHHHc-CCCeEEEEecCccchhccCEEEEEeCcE
Q 048639 414 PPILLLDEATSALDSESEKLVQE--ALERAM-QGRTVILIAHRMSTIVNADMIAVVEDGQ 470 (1139)
Q Consensus 414 ~~illlDEpts~LD~~~~~~i~~--~l~~~~-~~~tvi~itH~~~~~~~~d~i~~l~~G~ 470 (1139)
|+++||||||++||+.+...+.+ .++.+. .+.|+|++||+++.+..||++++|++|+
T Consensus 159 p~illlDEPt~~LD~~~~~~l~~~~ll~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~G~ 218 (218)
T cd03290 159 TNIVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTLVLVTHKLQYLPHADWIIAMKDGS 218 (218)
T ss_pred CCEEEEeCCccccCHHHHHHHHHHHHHHHHhcCCCEEEEEeCChHHHhhCCEEEEecCCC
Confidence 99999999999999999988887 455443 3789999999999988899999999884
No 432
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.5e-40 Score=365.22 Aligned_cols=218 Identities=22% Similarity=0.385 Sum_probs=184.2
Q ss_pred ccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcc
Q 048639 255 GNIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKN 334 (1139)
Q Consensus 255 ~~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~ 334 (1139)
..|+++|++++|++ +.+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+...+++.
T Consensus 6 ~~l~i~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 82 (265)
T PRK10253 6 ARLRGEQLTLGYGK---YTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVARR 82 (265)
T ss_pred cEEEEEEEEEEECC---EEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEEhhhCCHHHHhhh
Confidence 46999999999973 459999999999999999999999999999999999999999999999999987777777889
Q ss_pred eEEEecCCCCCc-ccHHHHHhcCCCCC------CHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHH
Q 048639 335 IGAVSQEPSLFT-GSLMDNIKVGNMDA------DDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIA 407 (1139)
Q Consensus 335 i~~v~Q~~~l~~-~ti~~ni~~g~~~~------~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lA 407 (1139)
++|++|++.++. .|++||+.++.... ..+. ....+.+.++.+ |++......+.+||||||||++||
T Consensus 83 i~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~--~l~~~~~~~~~~LS~Gq~qrv~la 155 (265)
T PRK10253 83 IGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKE-----DEEAVTKAMQAT--GITHLADQSVDTLSGGQRQRAWIA 155 (265)
T ss_pred eEEeeccCcCCCCCcHHHHHHhCcccccccccCCCHH-----HHHHHHHHHHHc--CCHHHhcCCcccCChHHHHHHHHH
Confidence 999999998875 59999998763110 0010 011122333333 343445667789999999999999
Q ss_pred HHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhc
Q 048639 408 RAIVKNPPILLLDEATSALDSESEKLVQEALERAMQ--GRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQ 482 (1139)
Q Consensus 408 Ral~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 482 (1139)
||++.+|+++||||||++||+.+...+.+.|.++.+ ++|+|++||+++.+.. ||++++|++|++++.|+++++..
T Consensus 156 ral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 233 (265)
T PRK10253 156 MVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIVAQGAPKEIVT 233 (265)
T ss_pred HHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhh
Confidence 999999999999999999999999999999988743 7899999999998865 99999999999999999998764
No 433
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.6e-40 Score=363.43 Aligned_cols=225 Identities=32% Similarity=0.468 Sum_probs=185.8
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCC-----ccEEEECCcccCC--CCh
Q 048639 885 RIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPN-----EGIILIDGKGIKE--YNL 957 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~-----~G~I~idG~di~~--~~l 957 (1139)
-|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|. +|+|.+||.++.. .+.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~ 80 (252)
T PRK14272 4 LLSAQDVNIYYGD---KQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDP 80 (252)
T ss_pred EEEEeeeEEEECC---EEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCH
Confidence 3789999999963 46999999999999999999999999999999999999874 8999999999875 344
Q ss_pred HHHhhhceEEcccccccc-ccHHHHhccCCC--cC-CHHH----HHHHHHHcCchHHHhhCCCCccccccCCCCCCChHH
Q 048639 958 RRLRSQIGLVQQEPLLFS-CSIRNNICYGNE--AA-SEAE----IVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQ 1029 (1139)
Q Consensus 958 ~~lR~~i~~V~Qdp~LF~-gTIreNL~~~~~--~~-sd~e----i~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQ 1029 (1139)
..+|++++|+||+|.+|. .|+++|+.++.. .. .+++ +.+.++..++++.+ ++.++.+ ..+|||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l---~~~~~~~----~~~LS~G~ 153 (252)
T PRK14272 81 VAMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAGIRDRDHLMEVAERSLRGAALWDEV---KDRLKTP----ATGLSGGQ 153 (252)
T ss_pred HHhhceeEEEeccCccCcCCCHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCcchhh---hhhhcCC----cccCCHHH
Confidence 577889999999999987 599999975421 11 2232 33345555554432 2234444 45799999
Q ss_pred HHHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCC
Q 048639 1030 KQRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKG 1108 (1139)
Q Consensus 1030 rQrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G 1108 (1139)
|||++|||||+++|+||||||||++||+.+...+.+.|++.. . ++|+|++||+++.+.+ ||||++|++|
T Consensus 154 ~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~---------~-~~tiii~sH~~~~~~~~~d~i~~l~~G 223 (252)
T PRK14272 154 QQRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLK---------K-VTTIIIVTHNMHQAARVSDTTSFFLVG 223 (252)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh---------c-CCeEEEEeCCHHHHHHhCCEEEEEECC
Confidence 999999999999999999999999999999999999999764 3 3569999999999986 9999999999
Q ss_pred EEEEecChhHHhhccCChHHH
Q 048639 1109 EVVEMGSHSTLVAESQGVYSR 1129 (1139)
Q Consensus 1109 ~ive~G~~~eLl~~~~g~f~~ 1129 (1139)
++++.|+++++++++...|.+
T Consensus 224 ~i~~~~~~~~~~~~~~~~~~~ 244 (252)
T PRK14272 224 DLVEHGPTDQLFTNPRDERTE 244 (252)
T ss_pred EEEEeCCHHHHHhCcCcHHHH
Confidence 999999999998765554543
No 434
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=1.4e-40 Score=357.31 Aligned_cols=202 Identities=34% Similarity=0.565 Sum_probs=172.8
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCC--CChHHHhhh
Q 048639 886 IEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKE--YNLRRLRSQ 963 (1139)
Q Consensus 886 I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~--~~l~~lR~~ 963 (1139)
|+++||+++|++ .++|+++||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++.. .+...+|++
T Consensus 1 l~~~~l~~~~~~---~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 77 (213)
T cd03262 1 IEIKNLHKSFGD---FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPDSGTIIIDGLKLTDDKKNINELRQK 77 (213)
T ss_pred CEEEEEEEEECC---eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccchhHHHHHhc
Confidence 478999999964 369999999999999999999999999999999999999999999999999853 455677899
Q ss_pred ceEEcccccccc-ccHHHHhccCCC---cCC----HHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHH
Q 048639 964 IGLVQQEPLLFS-CSIRNNICYGNE---AAS----EAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAI 1035 (1139)
Q Consensus 964 i~~V~Qdp~LF~-gTIreNL~~~~~---~~s----d~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlal 1035 (1139)
++|+||+|.+|. .|++||+.++.. ..+ ++++.++++..++.+...+. ..+||||||||++|
T Consensus 78 i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrv~l 146 (213)
T cd03262 78 VGMVFQQFNLFPHLTVLENITLAPIKVKGMSKAEAEERALELLEKVGLADKADAY-----------PAQLSGGQQQRVAI 146 (213)
T ss_pred ceEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhhC-----------ccccCHHHHHHHHH
Confidence 999999999886 699999976421 112 23466677777776554433 35799999999999
Q ss_pred HHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEE
Q 048639 1036 ARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEV 1110 (1139)
Q Consensus 1036 ARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~i 1110 (1139)
|||++++|++|||||||++||+++.+.+.+.|++.. +.++|+|++||+++.+.. ||+|++|++|++
T Consensus 147 a~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~---------~~~~tvi~~sh~~~~~~~~~d~i~~l~~g~i 213 (213)
T cd03262 147 ARALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLA---------EEGMTMVVVTHEMGFAREVADRVIFMDDGRI 213 (213)
T ss_pred HHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHH---------HcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999999999999764 334569999999999976 999999999975
No 435
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.8e-40 Score=365.17 Aligned_cols=221 Identities=32% Similarity=0.500 Sum_probs=189.0
Q ss_pred cccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccC-----CccEEEECCcccC----
Q 048639 883 KGRIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDP-----NEGIILIDGKGIK---- 953 (1139)
Q Consensus 883 ~g~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~---- 953 (1139)
.+.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+.+| ++|+|.+||.++.
T Consensus 14 ~~~l~~~~l~~~~~~---~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~g~~~~~~~~ 90 (265)
T PRK14252 14 QQKSEVNKLNFYYGG---YQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILHPDNVNILSP 90 (265)
T ss_pred CceEEEEEEEEEECC---eeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEcCcccccccc
Confidence 467999999999963 3699999999999999999999999999999999999875 7999999998874
Q ss_pred CCChHHHhhhceEEccccccccccHHHHhccCCC-------cCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCC
Q 048639 954 EYNLRRLRSQIGLVQQEPLLFSCSIRNNICYGNE-------AASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLS 1026 (1139)
Q Consensus 954 ~~~l~~lR~~i~~V~Qdp~LF~gTIreNL~~~~~-------~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LS 1026 (1139)
..+...+|++++|+||+|.+|.+|+++|+.++.. ...++++.++++.+++.+.+. ...+.....||
T Consensus 91 ~~~~~~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS 163 (265)
T PRK14252 91 EVDPIEVRMRISMVFQKPNPFPKSIFENVAYGLRIRGVKRRSILEERVENALRNAALWDEVK-------DRLGDLAFNLS 163 (265)
T ss_pred ccCHHHHhccEEEEccCCcCCcchHHHHHHhHHHHcCCChHHHHHHHHHHHHHHcCCchhhh-------HHHhCCcccCC
Confidence 3345578889999999999999999999986421 112456788888888754332 22344456899
Q ss_pred hHHHHHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEE
Q 048639 1027 GGQKQRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVM 1105 (1139)
Q Consensus 1027 gGQrQrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl 1105 (1139)
||||||++|||||+++|++|||||||++||+.+.+.+.+.|++.. . ++|+|+|||+++.+.. ||||++|
T Consensus 164 ~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~---------~-~~tiiivth~~~~~~~~~d~i~~l 233 (265)
T PRK14252 164 GGQQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLK---------N-KVTILIVTHNMQQAARVSDYTAYM 233 (265)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHH---------h-CCEEEEEecCHHHHHHhCCEEEEE
Confidence 999999999999999999999999999999999999999999764 3 3569999999999975 9999999
Q ss_pred eCCEEEEecChhHHhhcc
Q 048639 1106 DKGEVVEMGSHSTLVAES 1123 (1139)
Q Consensus 1106 ~~G~ive~G~~~eLl~~~ 1123 (1139)
++|++++.|+++++..++
T Consensus 234 ~~G~i~~~g~~~~~~~~~ 251 (265)
T PRK14252 234 YMGELIEFGATDTIFIKP 251 (265)
T ss_pred ECCEEEEeCCHHHHHhCC
Confidence 999999999999998543
No 436
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=1.6e-40 Score=376.21 Aligned_cols=222 Identities=22% Similarity=0.396 Sum_probs=181.8
Q ss_pred cEEEEeEEEECCCCC-CCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCC---ccEEEECCccCCCCCHHHH
Q 048639 256 NIDIRDVCFAYPSRP-DQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPS---NGDILIDSLNIKDLDLKSL 331 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~-~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~---~G~i~~~g~~~~~~~~~~~ 331 (1139)
.++++|++++|+... ..++|+||||+|++||+++|+|+||||||||+++|+|+++|+ +|+|.++|.++..++.+++
T Consensus 12 ~L~i~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~ 91 (330)
T PRK09473 12 LLDVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKEL 91 (330)
T ss_pred eEEEeCeEEEEecCCCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHH
Confidence 589999999996421 246999999999999999999999999999999999999996 9999999999988876654
Q ss_pred h----cceEEEecCC--CCCc-ccHHHHHhcCC---CCCCHHHHHHHHHHhcHHHHHHh--CCCCCCccccccCCCCChH
Q 048639 332 R----KNIGAVSQEP--SLFT-GSLMDNIKVGN---MDADDEQIYNASMMANAHSFISQ--LPDQYSTELGQRGVQLSGG 399 (1139)
Q Consensus 332 ~----~~i~~v~Q~~--~l~~-~ti~~ni~~g~---~~~~~~~~~~~~~~~~~~~~i~~--l~~g~~t~i~~~g~~LSgG 399 (1139)
+ +.|+||+|+| .+++ .|+.+|+.... ...+.++..+. +.+.++. ++++. ..++..+.+||||
T Consensus 92 ~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~~~~~~~~~~~-----~~~~L~~vgL~~~~-~~~~~~p~~LSgG 165 (330)
T PRK09473 92 NKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMSKAEAFEE-----SVRMLDAVKMPEAR-KRMKMYPHEFSGG 165 (330)
T ss_pred HHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHH-----HHHHHHHcCCCChH-HHhcCCcccCCHH
Confidence 3 4799999999 4554 47888775321 11222222111 1222333 34322 3357788999999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CCeEEEEecCccchhc-cCEEEEEeCcEEEEecC
Q 048639 400 QKQRIAIARAIVKNPPILLLDEATSALDSESEKLVQEALERAMQ--GRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGT 476 (1139)
Q Consensus 400 qkqRi~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~ 476 (1139)
||||++|||||+.+|++||+||||++||+.++..+.+.|+++.+ +.|+|+|||+++.+.. ||+|++|++|+|++.|+
T Consensus 166 ~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~~Dri~vm~~G~ive~g~ 245 (330)
T PRK09473 166 MRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMYAGRTMEYGN 245 (330)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEECC
Confidence 99999999999999999999999999999999999999988754 7899999999999875 99999999999999999
Q ss_pred hhhhhcc
Q 048639 477 HHSLLQT 483 (1139)
Q Consensus 477 ~~~l~~~ 483 (1139)
++++.+.
T Consensus 246 ~~~i~~~ 252 (330)
T PRK09473 246 ARDVFYQ 252 (330)
T ss_pred HHHHHhC
Confidence 9999764
No 437
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-40 Score=356.64 Aligned_cols=205 Identities=24% Similarity=0.471 Sum_probs=173.5
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcceE
Q 048639 257 IDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNIG 336 (1139)
Q Consensus 257 i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 336 (1139)
++++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++.. ..++.++
T Consensus 1 l~~~~l~~~~~~---~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~----~~~~~i~ 73 (210)
T cd03269 1 LEVENVTKRFGR---VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDI----AARNRIG 73 (210)
T ss_pred CEEEEEEEEECC---EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhH----HHHccEE
Confidence 478999999963 469999999999999999999999999999999999999999999999987753 4567899
Q ss_pred EEecCCCCCcc-cHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHccC
Q 048639 337 AVSQEPSLFTG-SLMDNIKVGNM--DADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVKN 413 (1139)
Q Consensus 337 ~v~Q~~~l~~~-ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~~ 413 (1139)
|++|++.++.. |++||+.++.. .....+. ...+.+.++.+ |++........+||||||||++|||||+.+
T Consensus 74 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~al~~~ 146 (210)
T cd03269 74 YLPEERGLYPKMKVIDQLVYLAQLKGLKKEEA-----RRRIDEWLERL--ELSEYANKRVEELSKGNQQKVQFIAAVIHD 146 (210)
T ss_pred EeccCCcCCcCCcHHHHHHHHHHHcCCChHHH-----HHHHHHHHHHc--CChHHHhCcHhhCCHHHHHHHHHHHHHhcC
Confidence 99999999875 99999987421 1111111 12233456665 455566777889999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCCeEEEEecCccchhc-cCEEEEEeCcEEEEec
Q 048639 414 PPILLLDEATSALDSESEKLVQEALERAM-QGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETG 475 (1139)
Q Consensus 414 ~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g 475 (1139)
|+++||||||++||+.+...+.+.++++. +++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 147 p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 210 (210)
T cd03269 147 PELLILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQMELVEELCDRVLLLNKGRAVLYG 210 (210)
T ss_pred CCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeCCEEEecC
Confidence 99999999999999999999999998864 47899999999999865 9999999999998754
No 438
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=1.4e-40 Score=374.70 Aligned_cols=201 Identities=23% Similarity=0.419 Sum_probs=175.0
Q ss_pred cccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhceEEccccccccc-cHH
Q 048639 901 VTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQIGLVQQEPLLFSC-SIR 979 (1139)
Q Consensus 901 ~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~~V~Qdp~LF~g-TIr 979 (1139)
.++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.. ....+|++++|+||++.+|.. |++
T Consensus 6 ~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~-~~~~~~~~i~~~~q~~~~~~~~tv~ 84 (302)
T TIGR01188 6 FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTARVAGYDVVR-EPRKVRRSIGIVPQYASVDEDLTGR 84 (302)
T ss_pred eeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-CHHHHHhhcEEecCCCCCCCCCcHH
Confidence 469999999999999999999999999999999999999999999999999876 445678999999999999875 999
Q ss_pred HHhccCCC--cC----CHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhcCCCCEEEeecccc
Q 048639 980 NNICYGNE--AA----SEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIARTLLKRPAIMLLDEATS 1053 (1139)
Q Consensus 980 eNL~~~~~--~~----sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalARALlr~p~ILlLDEaTS 1053 (1139)
||+.+... .. .++++.++++..++.+... .. ..+||||||||++|||||+.+|++|||||||+
T Consensus 85 e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~----~~~LSgG~~qrv~la~al~~~p~lllLDEPt~ 153 (302)
T TIGR01188 85 ENLEMMGRLYGLPKDEAEERAEELLELFELGEAAD-------RP----VGTYSGGMRRRLDIAASLIHQPDVLFLDEPTT 153 (302)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHhC-------Cc----hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCc
Confidence 99976321 11 2345777888888865432 22 34799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEEEecChhHHhhc
Q 048639 1054 ALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVVEMGSHSTLVAE 1122 (1139)
Q Consensus 1054 ~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eLl~~ 1122 (1139)
+||+.+.+.+++.|++.. .+++|||++||+++.+.. ||+|++|++|++++.|+++++.++
T Consensus 154 gLD~~~~~~l~~~l~~~~---------~~g~tvi~~sH~~~~~~~~~d~v~~l~~G~i~~~g~~~~l~~~ 214 (302)
T TIGR01188 154 GLDPRTRRAIWDYIRALK---------EEGVTILLTTHYMEEADKLCDRIAIIDHGRIIAEGTPEELKRR 214 (302)
T ss_pred CCCHHHHHHHHHHHHHHH---------hCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHHh
Confidence 999999999999999864 334569999999999976 999999999999999999999764
No 439
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=1.2e-40 Score=357.62 Aligned_cols=202 Identities=27% Similarity=0.482 Sum_probs=166.1
Q ss_pred EEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcceEE
Q 048639 258 DIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNIGA 337 (1139)
Q Consensus 258 ~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 337 (1139)
+++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++. .++++++|
T Consensus 1 ~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~-----~~~~~i~~ 72 (213)
T cd03235 1 EVEDLTVSYGG---HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLE-----KERKRIGY 72 (213)
T ss_pred CcccceeEECC---EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHH-----HHHhheEE
Confidence 36799999963 45999999999999999999999999999999999999999999999998764 46778999
Q ss_pred EecCCCC---CcccHHHHHhcCCCCC------CHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHH
Q 048639 338 VSQEPSL---FTGSLMDNIKVGNMDA------DDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIAR 408 (1139)
Q Consensus 338 v~Q~~~l---~~~ti~~ni~~g~~~~------~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lAR 408 (1139)
++|++.+ ++.|++||+.++.... ..++. ...+.+.++.+ |++........+||||||||++|||
T Consensus 73 v~q~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la~ 145 (213)
T cd03235 73 VPQRRSIDRDFPISVRDVVLMGLYGHKGLFRRLSKAD-----KAKVDEALERV--GLSELADRQIGELSGGQQQRVLLAR 145 (213)
T ss_pred eccccccccCCCCcHHHHHHhccccccccccCCCHHH-----HHHHHHHHHHc--CCHHHHhCCcccCCHHHHHHHHHHH
Confidence 9999976 5679999998764311 00111 11122334444 3333445567799999999999999
Q ss_pred HHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCCeEEEEecCccchhc-cCEEEEEeCcEEEEec
Q 048639 409 AIVKNPPILLLDEATSALDSESEKLVQEALERAM-QGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETG 475 (1139)
Q Consensus 409 al~~~~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g 475 (1139)
||+.+|++|||||||++||+.+...+.+.|+++. +++|+|++||+++.+.. ||++++|++| +++.|
T Consensus 146 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~~-~~~~g 213 (213)
T cd03235 146 ALVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRREGMTILVVTHDLGLVLEYFDRVLLLNRT-VVASG 213 (213)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcCc-EeecC
Confidence 9999999999999999999999999999998865 57899999999999876 9999999986 55543
No 440
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.3e-40 Score=358.90 Aligned_cols=213 Identities=30% Similarity=0.537 Sum_probs=184.8
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhce
Q 048639 886 IEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQIG 965 (1139)
Q Consensus 886 I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~ 965 (1139)
|+++|++++|++ ++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .|++++
T Consensus 1 l~~~~l~~~~~~----~~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~~G~v~i~g~~~~~~~~--~~~~i~ 74 (235)
T cd03299 1 LKVENLSKDWKE----FKLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPDSGKILLNGKDITNLPP--EKRDIS 74 (235)
T ss_pred CeeEeEEEEeCC----ceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcCcCCh--hHcCEE
Confidence 578999999962 27999999999999999999999999999999999999999999999999987654 368899
Q ss_pred EEcccccccc-ccHHHHhccCCCc------CCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 048639 966 LVQQEPLLFS-CSIRNNICYGNEA------ASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIART 1038 (1139)
Q Consensus 966 ~V~Qdp~LF~-gTIreNL~~~~~~------~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalARA 1038 (1139)
++||++.+|. .|++||+.++... ..++++.++++.+++.+++.+.| ..||||||||++||||
T Consensus 75 ~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrl~lara 143 (235)
T cd03299 75 YVPQNYALFPHMTVYKNIAYGLKKRKVDKKEIERKVLEIAEMLGIDHLLNRKP-----------ETLSGGEQQRVAIARA 143 (235)
T ss_pred EEeecCccCCCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHHhcCc-----------ccCCHHHHHHHHHHHH
Confidence 9999999885 7999999864211 12346778888888877765543 4699999999999999
Q ss_pred hcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEEEecChh
Q 048639 1039 LLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVVEMGSHS 1117 (1139)
Q Consensus 1039 Llr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~ 1117 (1139)
++++|++|+|||||++||+.+.+.+.+.|++... ..++|+|++||+++.+.+ ||+|++|++|++++.|+++
T Consensus 144 l~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~--------~~~~tili~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~ 215 (235)
T cd03299 144 LVVNPKILLLDEPFSALDVRTKEKLREELKKIRK--------EFGVTVLHVTHDFEEAWALADKVAIMLNGKLIQVGKPE 215 (235)
T ss_pred HHcCCCEEEECCCcccCCHHHHHHHHHHHHHHHH--------hcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHH
Confidence 9999999999999999999999999999997641 214569999999999876 9999999999999999999
Q ss_pred HHhhcc
Q 048639 1118 TLVAES 1123 (1139)
Q Consensus 1118 eLl~~~ 1123 (1139)
++.+.+
T Consensus 216 ~~~~~~ 221 (235)
T cd03299 216 EVFKKP 221 (235)
T ss_pred HHHhCc
Confidence 998653
No 441
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.3e-40 Score=362.23 Aligned_cols=220 Identities=30% Similarity=0.493 Sum_probs=182.2
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCC-----CccEEEECCccCCCC--CH
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDP-----SNGDILIDSLNIKDL--DL 328 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~-----~~G~i~~~g~~~~~~--~~ 328 (1139)
.++++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++| ++|+|.++|.++... +.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 80 (251)
T PRK14270 4 KMESKNLNLWYGE---KQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDV 80 (251)
T ss_pred EEEEEEeEEEECC---eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccH
Confidence 5899999999963 4599999999999999999999999999999999999875 799999999998643 34
Q ss_pred HHHhcceEEEecCCCCCcccHHHHHhcCCCC--C-CHHHHHHHHHHhcHHHHHHhC--CCCCCccccccCCCCChHHHHH
Q 048639 329 KSLRKNIGAVSQEPSLFTGSLMDNIKVGNMD--A-DDEQIYNASMMANAHSFISQL--PDQYSTELGQRGVQLSGGQKQR 403 (1139)
Q Consensus 329 ~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~--~-~~~~~~~~~~~~~~~~~i~~l--~~g~~t~i~~~g~~LSgGqkqR 403 (1139)
..+++.++|+||++.+|+.|++||+.++... . ..++..+ .+.+.++.+ .+++.......+..||||||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qr 155 (251)
T PRK14270 81 VELRKRVGMVFQKPNPFPMSIYDNVAYGPRIHGIKDKKELDK-----IVEWALKKAALWDEVKDDLKKSALKLSGGQQQR 155 (251)
T ss_pred HHHHhheEEEecCCCcCCCcHHHHHHhHHHhcCCCcHHHHHH-----HHHHHHHHcCCchhhhhHhhCCcccCCHHHHHH
Confidence 4667889999999999999999999875311 1 1111111 111222222 1122234566788999999999
Q ss_pred HHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhc
Q 048639 404 IAIARAIVKNPPILLLDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQ 482 (1139)
Q Consensus 404 i~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 482 (1139)
++||||++.+|+|+||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++..
T Consensus 156 v~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 235 (251)
T PRK14270 156 LCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKKEYTIVIVTHNMQQASRVSDYTAFFLMGDLIEFNKTEKIFL 235 (251)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEEcCHHHHHHhcCEEEEEECCeEEEeCCHHHHhc
Confidence 99999999999999999999999999999999999987767999999999999876 99999999999999999999865
Q ss_pred c
Q 048639 483 T 483 (1139)
Q Consensus 483 ~ 483 (1139)
.
T Consensus 236 ~ 236 (251)
T PRK14270 236 E 236 (251)
T ss_pred C
Confidence 3
No 442
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-40 Score=366.17 Aligned_cols=217 Identities=29% Similarity=0.526 Sum_probs=180.2
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccC-----CCccEEEECCccCCCCC--HH
Q 048639 257 IDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYD-----PSNGDILIDSLNIKDLD--LK 329 (1139)
Q Consensus 257 i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~-----~~~G~i~~~g~~~~~~~--~~ 329 (1139)
-+++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++ |++|+|.++|+++...+ ..
T Consensus 6 ~~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 82 (251)
T PRK14244 6 ASVKNLNLWYGS---KQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVV 82 (251)
T ss_pred EEeeeEEEEECC---eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchH
Confidence 468999999963 469999999999999999999999999999999999986 47999999999876543 33
Q ss_pred HHhcceEEEecCCCCCcccHHHHHhcCCC--CC--CHHHHHHHHHHhcHHHHHHhCCCCC----CccccccCCCCChHHH
Q 048639 330 SLRKNIGAVSQEPSLFTGSLMDNIKVGNM--DA--DDEQIYNASMMANAHSFISQLPDQY----STELGQRGVQLSGGQK 401 (1139)
Q Consensus 330 ~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~--~~--~~~~~~~~~~~~~~~~~i~~l~~g~----~t~i~~~g~~LSgGqk 401 (1139)
.+++.++|++|++.+|+.|++||+.++.. .. ..++..+ .+.+.++.+ |+ .+.++..+.+||||||
T Consensus 83 ~~~~~i~~v~q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~~~~~LS~Gq~ 155 (251)
T PRK14244 83 LLRAKVGMVFQKPNPFPKSIYDNVAYGPKLHGLAKNKKKLDE-----IVEKSLTSV--GLWEELGDRLKDSAFELSGGQQ 155 (251)
T ss_pred HHhhhEEEEecCcccccCCHHHHHHHHHHhcCCCCCHHHHHH-----HHHHHHHHc--CCCchhhhHhhcChhhCCHHHH
Confidence 56789999999999999999999987521 11 1111111 122333443 22 2345667889999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhh
Q 048639 402 QRIAIARAIVKNPPILLLDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSL 480 (1139)
Q Consensus 402 qRi~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l 480 (1139)
||++|||||+++|+++||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 156 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 235 (251)
T PRK14244 156 QRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELKKNFTIIVVTHSMKQAKKVSDRVAFFQSGRIVEYNTTQEI 235 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhcCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988778999999999999875 999999999999999999888
Q ss_pred hcc
Q 048639 481 LQT 483 (1139)
Q Consensus 481 ~~~ 483 (1139)
.+.
T Consensus 236 ~~~ 238 (251)
T PRK14244 236 FKN 238 (251)
T ss_pred hcC
Confidence 643
No 443
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-40 Score=341.33 Aligned_cols=225 Identities=27% Similarity=0.475 Sum_probs=194.0
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHH-hcc
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSL-RKN 334 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~-~~~ 334 (1139)
-+++++++++|++ -.+++||||++++||+++|||||||||||++++|+|+|+|++|+|.++|+|+..++++.. |..
T Consensus 4 lL~v~~l~k~FGG---l~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P~~G~v~~~G~~it~l~p~~iar~G 80 (250)
T COG0411 4 LLEVRGLSKRFGG---LTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKPSSGTVIFRGRDITGLPPHRIARLG 80 (250)
T ss_pred eeeeccceeecCC---EEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccCCCceEEECCcccCCCCHHHHHhcc
Confidence 3679999999974 459999999999999999999999999999999999999999999999999999998775 567
Q ss_pred eEEEecCCCCCcc-cHHHHHhcCCCCCC---------HHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHH
Q 048639 335 IGAVSQEPSLFTG-SLMDNIKVGNMDAD---------DEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRI 404 (1139)
Q Consensus 335 i~~v~Q~~~l~~~-ti~~ni~~g~~~~~---------~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi 404 (1139)
|+--||.+.+|++ ||.||+..+..... ...-.+......+.+.++.+ |+....++...+||+|||.|+
T Consensus 81 i~RTFQ~~rlF~~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~~e~A~~~Le~v--gL~~~a~~~A~~LsyG~qR~L 158 (250)
T COG0411 81 IARTFQITRLFPGLTVLENVAVGAHARLGLSGLLGRPRARKEEREARERARELLEFV--GLGELADRPAGNLSYGQQRRL 158 (250)
T ss_pred ceeecccccccCCCcHHHHHHHHhhhhhhhhhhhccccchhhHHHHHHHHHHHHHHc--CCchhhcchhhcCChhHhHHH
Confidence 9999999999976 99999998732110 00001122223344667776 778888889999999999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhh
Q 048639 405 AIARAIVKNPPILLLDEATSALDSESEKLVQEALERAMQ--GRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLL 481 (1139)
Q Consensus 405 ~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~ 481 (1139)
.|||||+.+|++|+||||.++|.+.-...+.+.|+++.+ |.|+++|.||++.+.. ||||+||+.|+++.+|+|+|+.
T Consensus 159 EIArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~~Vm~l~dri~Vl~~G~~IAeG~P~eV~ 238 (250)
T COG0411 159 EIARALATQPKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMKLVMGLADRIVVLNYGEVIAEGTPEEVR 238 (250)
T ss_pred HHHHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccHHHhhhccEEEeccCCcCcccCCHHHHh
Confidence 999999999999999999999999999999999998874 5899999999999976 9999999999999999999997
Q ss_pred ccch
Q 048639 482 QTSD 485 (1139)
Q Consensus 482 ~~~~ 485 (1139)
+++.
T Consensus 239 ~dp~ 242 (250)
T COG0411 239 NNPR 242 (250)
T ss_pred cCHH
Confidence 7643
No 444
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=5.4e-40 Score=354.64 Aligned_cols=208 Identities=29% Similarity=0.478 Sum_probs=173.3
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHH---HHhc
Q 048639 257 IDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLK---SLRK 333 (1139)
Q Consensus 257 i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~---~~~~ 333 (1139)
|+++|++++|++ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.. .+++
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 79 (222)
T PRK10908 2 IRFEHVSKAYLG--GRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIWFSGHDITRLKNREVPFLRR 79 (222)
T ss_pred EEEEeeEEEecC--CCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCChhHHHHHHh
Confidence 789999999942 24699999999999999999999999999999999999999999999999998776543 3678
Q ss_pred ceEEEecCCCCC-cccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHH
Q 048639 334 NIGAVSQEPSLF-TGSLMDNIKVGNM--DADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAI 410 (1139)
Q Consensus 334 ~i~~v~Q~~~l~-~~ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal 410 (1139)
.++|++|++.++ +.|++||+.++.. ....++..+. +.+.++.+ |+.........+||||||||++||||+
T Consensus 80 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral 152 (222)
T PRK10908 80 QIGMIFQDHHLLMDRTVYDNVAIPLIIAGASGDDIRRR-----VSAALDKV--GLLDKAKNFPIQLSGGEQQRVGIARAV 152 (222)
T ss_pred heEEEecCccccccccHHHHHHhHHHhcCCCHHHHHHH-----HHHHHHHc--CChhhhhCCchhCCHHHHHHHHHHHHH
Confidence 999999999875 5699999987531 1222222221 12234443 333345566789999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCCeEEEEecCccchhc-cCEEEEEeCcEEEE
Q 048639 411 VKNPPILLLDEATSALDSESEKLVQEALERAM-QGRTVILIAHRMSTIVN-ADMIAVVEDGQVTE 473 (1139)
Q Consensus 411 ~~~~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~ 473 (1139)
+.+|++|||||||++||+.+.+.+.+.++++. ++.|+|++||+++.+.. ||+|++|++|+++.
T Consensus 153 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~ 217 (222)
T PRK10908 153 VNKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIGLISRRSYRMLTLSDGHLHG 217 (222)
T ss_pred HcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEcc
Confidence 99999999999999999999999999998874 47899999999999976 99999999999863
No 445
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-40 Score=366.84 Aligned_cols=220 Identities=27% Similarity=0.491 Sum_probs=185.0
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCC-----CccEEEECCccCCCCC-HH
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDP-----SNGDILIDSLNIKDLD-LK 329 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~-----~~G~i~~~g~~~~~~~-~~ 329 (1139)
.++++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++...+ ..
T Consensus 21 ~l~i~nl~~~~~~---~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~ 97 (276)
T PRK14271 21 AMAAVNLTLGFAG---KTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVL 97 (276)
T ss_pred EEEEeeEEEEECC---EEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhH
Confidence 5899999999963 4699999999999999999999999999999999999986 7999999999887653 34
Q ss_pred HHhcceEEEecCCCCCcccHHHHHhcCCC---CCCHHHHHHHHHHhcHHHHHHhC--CCCCCccccccCCCCChHHHHHH
Q 048639 330 SLRKNIGAVSQEPSLFTGSLMDNIKVGNM---DADDEQIYNASMMANAHSFISQL--PDQYSTELGQRGVQLSGGQKQRI 404 (1139)
Q Consensus 330 ~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~---~~~~~~~~~~~~~~~~~~~i~~l--~~g~~t~i~~~g~~LSgGqkqRi 404 (1139)
.+++.++|++|++.+|+.|++||+.++.. ..+.++..+.. .+.++.+ ...+.+.+...+.+||||||||+
T Consensus 98 ~~~~~i~~v~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~-----~~~l~~~~l~~~~~~~l~~~~~~LSgGq~qrl 172 (276)
T PRK14271 98 EFRRRVGMLFQRPNPFPMSIMDNVLAGVRAHKLVPRKEFRGVA-----QARLTEVGLWDAVKDRLSDSPFRLSGGQQQLL 172 (276)
T ss_pred HHhhheEEeccCCccCCccHHHHHHHHHHhccCCCHHHHHHHH-----HHHHHHcCCCchhhhHhhCCcccCCHHHHHHH
Confidence 67889999999999999999999987632 12333322211 1223333 22222445677889999999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhcc
Q 048639 405 AIARAIVKNPPILLLDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQT 483 (1139)
Q Consensus 405 ~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 483 (1139)
+|||||+.+|+++||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++.+.
T Consensus 173 ~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 252 (276)
T PRK14271 173 CLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLADRLTVIIVTHNLAQAARISDRAALFFDGRLVEEGPTEQLFSS 252 (276)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhC
Confidence 9999999999999999999999999999999999887667899999999999875 999999999999999999998654
No 446
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-40 Score=363.66 Aligned_cols=219 Identities=30% Similarity=0.501 Sum_probs=182.4
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCC-----CccEEEECCccCCCC--CH
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDP-----SNGDILIDSLNIKDL--DL 328 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~-----~~G~i~~~g~~~~~~--~~ 328 (1139)
.|+++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+.+| ++|+|.++|+++... +.
T Consensus 6 ~i~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 82 (253)
T PRK14261 6 ILSTKNLNLWYGE---KHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADV 82 (253)
T ss_pred eEEEeeeEEEECC---eeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccch
Confidence 5899999999963 4699999999999999999999999999999999999763 489999999998765 44
Q ss_pred HHHhcceEEEecCCCCCcccHHHHHhcCCCC--C-CHHHHHHHHHHhcHHHHHHhC--CCCCCccccccCCCCChHHHHH
Q 048639 329 KSLRKNIGAVSQEPSLFTGSLMDNIKVGNMD--A-DDEQIYNASMMANAHSFISQL--PDQYSTELGQRGVQLSGGQKQR 403 (1139)
Q Consensus 329 ~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~--~-~~~~~~~~~~~~~~~~~i~~l--~~g~~t~i~~~g~~LSgGqkqR 403 (1139)
...++.++|++|++.+|+.|++||+.++... . ...+..+. +.+.++.+ .+++.+..++.+.+||||||||
T Consensus 83 ~~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qr 157 (253)
T PRK14261 83 VALRRKIGMVFQRPNPFPKSIYENVAYGPRIHGEKNKKTLDTI-----VEKSLKGAALWDEVKDRLHDSALSLSGGQQQR 157 (253)
T ss_pred hhhhceEEEEecCCccCcccHHHHHHhhHHhcCCCCHHHHHHH-----HHHHHHHhcCchhhHHHhhcChhhCCHHHHHH
Confidence 5667889999999999989999999986321 1 11111111 11222222 2223345677888999999999
Q ss_pred HHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhc
Q 048639 404 IAIARAIVKNPPILLLDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQ 482 (1139)
Q Consensus 404 i~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 482 (1139)
++||||++.+|+++||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++..
T Consensus 158 v~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~tvii~sh~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 237 (253)
T PRK14261 158 LCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKKEYTVIIVTHNMQQAARVSDYTGFMYLGKLIEFDKTTQIFE 237 (253)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhhCceEEEEEcCHHHHHhhCCEEEEEECCEEEEcCCHHHHHh
Confidence 99999999999999999999999999999999999988767999999999999975 99999999999999999988754
No 447
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=3.3e-40 Score=371.23 Aligned_cols=212 Identities=23% Similarity=0.419 Sum_probs=184.8
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhce
Q 048639 886 IEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQIG 965 (1139)
Q Consensus 886 I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~ 965 (1139)
++++|++++|++ ..+|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.+||.++.. +...+|++++
T Consensus 3 l~~~~l~~~~~~---~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~~G~i~i~g~~~~~-~~~~~~~~ig 78 (301)
T TIGR03522 3 IRVSSLTKLYGT---QNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPDSGSVQVCGEDVLQ-NPKEVQRNIG 78 (301)
T ss_pred EEEEEEEEEECC---EEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-ChHHHHhceE
Confidence 789999999953 469999999999999999999999999999999999999999999999999976 4467889999
Q ss_pred EEccccccccc-cHHHHhccCCC--cCC----HHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 048639 966 LVQQEPLLFSC-SIRNNICYGNE--AAS----EAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIART 1038 (1139)
Q Consensus 966 ~V~Qdp~LF~g-TIreNL~~~~~--~~s----d~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalARA 1038 (1139)
|+||+|.+|.+ |++|||.+... ... .+++.++++..++.++.. ....+||||||||++||||
T Consensus 79 ~~~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~-----------~~~~~LS~G~~qrv~la~a 147 (301)
T TIGR03522 79 YLPEHNPLYLDMYVREYLQFIAGIYGMKGQLLKQRVEEMIELVGLRPEQH-----------KKIGQLSKGYRQRVGLAQA 147 (301)
T ss_pred EecCCCCCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCchHhc-----------CchhhCCHHHHHHHHHHHH
Confidence 99999999976 99999975321 111 345677777777765532 2345799999999999999
Q ss_pred hcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEEEecChh
Q 048639 1039 LLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVVEMGSHS 1117 (1139)
Q Consensus 1039 Llr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~ 1117 (1139)
|+.+|++|+|||||++||+.+.+.+++.|++.. . ++|||++||+++.+.. ||||++|++|++++.|+++
T Consensus 148 l~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~---------~-~~tiii~sH~l~~~~~~~d~i~~l~~G~i~~~g~~~ 217 (301)
T TIGR03522 148 LIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIG---------K-DKTIILSTHIMQEVEAICDRVIIINKGKIVADKKLD 217 (301)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhc---------C-CCEEEEEcCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999764 3 3569999999999887 9999999999999999999
Q ss_pred HHhhc
Q 048639 1118 TLVAE 1122 (1139)
Q Consensus 1118 eLl~~ 1122 (1139)
++.++
T Consensus 218 ~~~~~ 222 (301)
T TIGR03522 218 ELSAA 222 (301)
T ss_pred HHHHh
Confidence 99754
No 448
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-40 Score=362.80 Aligned_cols=219 Identities=30% Similarity=0.506 Sum_probs=181.8
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCC-----CccEEEECCccCC-CCCHH
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDP-----SNGDILIDSLNIK-DLDLK 329 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~-----~~G~i~~~g~~~~-~~~~~ 329 (1139)
.++++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++. ..+..
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~ 79 (249)
T PRK14253 3 KFNIENLDLFYGE---NQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVA 79 (249)
T ss_pred eEEEeccEEEECC---eeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchH
Confidence 4889999999963 4699999999999999999999999999999999999986 5999999999885 34566
Q ss_pred HHhcceEEEecCCCCCcccHHHHHhcCCCC--CC-HHHHHHHHHHhcHHHHHHh--CCCCCCccccccCCCCChHHHHHH
Q 048639 330 SLRKNIGAVSQEPSLFTGSLMDNIKVGNMD--AD-DEQIYNASMMANAHSFISQ--LPDQYSTELGQRGVQLSGGQKQRI 404 (1139)
Q Consensus 330 ~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~--~~-~~~~~~~~~~~~~~~~i~~--l~~g~~t~i~~~g~~LSgGqkqRi 404 (1139)
.+++.++|++|++.+|+.|++||+.++... .. .+...+. +.+.++. +.+++.+.....+.+||||||||+
T Consensus 80 ~~~~~i~~~~q~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv 154 (249)
T PRK14253 80 DLRIKVGMVFQKPNPFPMSIYENVAYGLRAQGIKDKKVLDEV-----VERSLRGAALWDEVKDRLKSHAFGLSGGQQQRL 154 (249)
T ss_pred HHHhheeEEecCCCcCcccHHHHHHhHHHhcCCCchHHHHHH-----HHHHHHHcCCchhhhHHhhcCcccCCHHHHHHH
Confidence 778899999999999999999999876321 11 1111111 1111221 221222345667889999999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhc
Q 048639 405 AIARAIVKNPPILLLDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQ 482 (1139)
Q Consensus 405 ~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 482 (1139)
+|||||+.+|+++||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++..
T Consensus 155 ~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 233 (249)
T PRK14253 155 CIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKKNYTIVIVTHSMQQARRISDRTAFFLMGELVEHDDTQVIFS 233 (249)
T ss_pred HHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHHc
Confidence 9999999999999999999999999999999999988777999999999999876 99999999999999999887743
No 449
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=2.7e-40 Score=364.65 Aligned_cols=221 Identities=24% Similarity=0.421 Sum_probs=184.1
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcceE
Q 048639 257 IDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNIG 336 (1139)
Q Consensus 257 i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 336 (1139)
++++|+++.|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++
T Consensus 2 l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 78 (256)
T TIGR03873 2 LRLSRVSWSAGG---RLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPDAGTVDLAGVDLHGLSRRARARRVA 78 (256)
T ss_pred ceEEeEEEEECC---EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEEcccCCHHHHhhheE
Confidence 689999999963 46999999999999999999999999999999999999999999999999998888777788899
Q ss_pred EEecCCCC-CcccHHHHHhcCCCCCCHH-HHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHccCC
Q 048639 337 AVSQEPSL-FTGSLMDNIKVGNMDADDE-QIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVKNP 414 (1139)
Q Consensus 337 ~v~Q~~~l-~~~ti~~ni~~g~~~~~~~-~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~~~ 414 (1139)
|++|++.+ +..|++||+.++....... ..........+.+.++.+ |+.......+..||||||||++||||++.+|
T Consensus 79 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~al~~~p 156 (256)
T TIGR03873 79 LVEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALART--ELSHLADRDMSTLSGGERQRVHVARALAQEP 156 (256)
T ss_pred EecccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHc--CcHhhhcCCcccCCHHHHHHHHHHHHHhcCC
Confidence 99999865 4579999998863211000 000000111233445554 3344456678899999999999999999999
Q ss_pred CEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhc
Q 048639 415 PILLLDEATSALDSESEKLVQEALERAM-QGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQ 482 (1139)
Q Consensus 415 ~illlDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 482 (1139)
+++||||||++||+.+...+.+.|+++. +++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 157 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 226 (256)
T TIGR03873 157 KLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLNLAASYCDHVVVLDGGRVVAAGPPREVLT 226 (256)
T ss_pred CEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCEEEecCHHHhhC
Confidence 9999999999999999999999998875 47899999999999965 99999999999999999988754
No 450
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=4.4e-40 Score=363.65 Aligned_cols=213 Identities=24% Similarity=0.391 Sum_probs=184.5
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCC--------ccEEEECCcccCCCCh
Q 048639 886 IEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPN--------EGIILIDGKGIKEYNL 957 (1139)
Q Consensus 886 I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~--------~G~I~idG~di~~~~l 957 (1139)
|+++|++++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|+ +|+|.+||.++...+.
T Consensus 2 l~~~nl~~~~~~---~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~ 78 (272)
T PRK13547 2 LTADHLHVARRH---RAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDA 78 (272)
T ss_pred eEEEEEEEEECC---EeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCH
Confidence 789999999953 36999999999999999999999999999999999999998 9999999999988888
Q ss_pred HHHhhhceEEccccc-cccccHHHHhccCC-Cc------C---CHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCC
Q 048639 958 RRLRSQIGLVQQEPL-LFSCSIRNNICYGN-EA------A---SEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLS 1026 (1139)
Q Consensus 958 ~~lR~~i~~V~Qdp~-LF~gTIreNL~~~~-~~------~---sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LS 1026 (1139)
..+|+.++|+||++. +|..|++||+.++. +. . .++.++++++..++.+.. +.....||
T Consensus 79 ~~~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS 147 (272)
T PRK13547 79 PRLARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALAGATALV-----------GRDVTTLS 147 (272)
T ss_pred HHHHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCcHhhh-----------cCCcccCC
Confidence 888889999999985 67899999997642 11 1 123467777777775443 33446799
Q ss_pred hHHHHHHHHHHHhc---------CCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCC-CeEEEEEecCchhh
Q 048639 1027 GGQKQRIAIARTLL---------KRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELAS-RTTQITVAHRLATV 1096 (1139)
Q Consensus 1027 gGQrQrlalARALl---------r~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~-~tTvI~IaHrl~ti 1096 (1139)
||||||++|||||+ .+|++|||||||++||+.+...+.+.|++.. ++ ++|+|+|+|+++.+
T Consensus 148 gG~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~---------~~~~~tviiisH~~~~~ 218 (272)
T PRK13547 148 GGELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLA---------RDWNLGVLAIVHDPNLA 218 (272)
T ss_pred HHHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHH---------HhcCCEEEEEECCHHHH
Confidence 99999999999999 5999999999999999999999999999764 22 45699999999999
Q ss_pred hc-CCEEEEEeCCEEEEecChhHHhh
Q 048639 1097 IN-SDVIVVMDKGEVVEMGSHSTLVA 1121 (1139)
Q Consensus 1097 ~~-~DrI~vl~~G~ive~G~~~eLl~ 1121 (1139)
.+ ||+|++|++|++++.|+++++++
T Consensus 219 ~~~~d~i~~l~~G~i~~~g~~~~~~~ 244 (272)
T PRK13547 219 ARHADRIAMLADGAIVAHGAPADVLT 244 (272)
T ss_pred HHhCCEEEEEECCeEEEecCHHHHcC
Confidence 75 99999999999999999999875
No 451
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4e-40 Score=362.68 Aligned_cols=220 Identities=31% Similarity=0.532 Sum_probs=181.1
Q ss_pred ccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccC--C---CccEEEECCccCCCC--C
Q 048639 255 GNIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYD--P---SNGDILIDSLNIKDL--D 327 (1139)
Q Consensus 255 ~~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~--~---~~G~i~~~g~~~~~~--~ 327 (1139)
+.|+++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++ | ++|+|.++|+++... +
T Consensus 3 ~~l~~~nl~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~ 79 (252)
T PRK14256 3 NKVKLEQLNVHFGK---NHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVD 79 (252)
T ss_pred cEEEEEEEEEEeCC---eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCC
Confidence 46999999999963 469999999999999999999999999999999999986 4 699999999998643 3
Q ss_pred HHHHhcceEEEecCCCCCc-ccHHHHHhcCCCC---CCHHHHHHHHHHhcHHHHHHhCC--CCCCccccccCCCCChHHH
Q 048639 328 LKSLRKNIGAVSQEPSLFT-GSLMDNIKVGNMD---ADDEQIYNASMMANAHSFISQLP--DQYSTELGQRGVQLSGGQK 401 (1139)
Q Consensus 328 ~~~~~~~i~~v~Q~~~l~~-~ti~~ni~~g~~~---~~~~~~~~~~~~~~~~~~i~~l~--~g~~t~i~~~g~~LSgGqk 401 (1139)
...+++.++|+||++.+|. .|++||+.++... ...++..+ .+.+.++.+. .......+..+.+||||||
T Consensus 80 ~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~ 154 (252)
T PRK14256 80 PVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNGRVNRSEADE-----IVESSLKRVALWDEVKDRLKSNAMELSGGQQ 154 (252)
T ss_pred hHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcCCCCHHHHHH-----HHHHHHHHcCCchhhhHHhhCCcCcCCHHHH
Confidence 4567889999999999987 5999999875211 11111111 1122333331 1111234567889999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhh
Q 048639 402 QRIAIARAIVKNPPILLLDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSL 480 (1139)
Q Consensus 402 qRi~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l 480 (1139)
||++|||||+.+|+++||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 155 qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 234 (252)
T PRK14256 155 QRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKEKYTIIIVTHNMQQAARVSDYTAFFYMGDLVECGETKKI 234 (252)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCcEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988777899999999999865 999999999999999999988
Q ss_pred hc
Q 048639 481 LQ 482 (1139)
Q Consensus 481 ~~ 482 (1139)
..
T Consensus 235 ~~ 236 (252)
T PRK14256 235 FT 236 (252)
T ss_pred Hh
Confidence 64
No 452
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=5.2e-40 Score=362.86 Aligned_cols=225 Identities=26% Similarity=0.389 Sum_probs=182.6
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcc-----cCCCChHH
Q 048639 885 RIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKG-----IKEYNLRR 959 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~d-----i~~~~l~~ 959 (1139)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.+ +...+...
T Consensus 6 ~l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~i~~~~~~~ 82 (258)
T PRK11701 6 LLSVRGLTKLYGP---RKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPDAGEVHYRMRDGQLRDLYALSEAE 82 (258)
T ss_pred eEEEeeeEEEcCC---ceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCccccccccccCCHHH
Confidence 4899999999964 369999999999999999999999999999999999999999999999998 87776554
Q ss_pred ----HhhhceEEccccc--cc-cccHHHHhccCC---CcCC----HHHHHHHHHHcCchHHHhhCCCCccccccCCCCCC
Q 048639 960 ----LRSQIGLVQQEPL--LF-SCSIRNNICYGN---EAAS----EAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQL 1025 (1139)
Q Consensus 960 ----lR~~i~~V~Qdp~--LF-~gTIreNL~~~~---~~~s----d~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~L 1025 (1139)
.|+.++|+||++. ++ ..|+.+|+.+.. .... ++++.++++..++.+ +.....+.+|
T Consensus 83 ~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~----------~~~~~~~~~L 152 (258)
T PRK11701 83 RRRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVGARHYGDIRATAGDWLERVEIDA----------ARIDDLPTTF 152 (258)
T ss_pred HHHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhccCcHHHHHHHHHHHHHHcCCCh----------hHHhCCCccC
Confidence 3567999999984 33 357888875310 1111 223444455544421 2334556789
Q ss_pred ChHHHHHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEE
Q 048639 1026 SGGQKQRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVV 1104 (1139)
Q Consensus 1026 SgGQrQrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~v 1104 (1139)
|||||||++|||||+++|+||||||||++||+.+.+.+.+.|++... ..+.|+|+|||+++.+.. ||+|++
T Consensus 153 S~Gq~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--------~~~~tii~isH~~~~~~~~~d~i~~ 224 (258)
T PRK11701 153 SGGMQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVR--------ELGLAVVIVTHDLAVARLLAHRLLV 224 (258)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH--------hcCcEEEEEeCCHHHHHHhcCEEEE
Confidence 99999999999999999999999999999999999999999987641 224569999999999985 999999
Q ss_pred EeCCEEEEecChhHHhhccCChHHHH
Q 048639 1105 MDKGEVVEMGSHSTLVAESQGVYSRL 1130 (1139)
Q Consensus 1105 l~~G~ive~G~~~eLl~~~~g~f~~l 1130 (1139)
|++|++++.|+++++..++...|.+.
T Consensus 225 l~~g~i~~~~~~~~~~~~~~~~~~~~ 250 (258)
T PRK11701 225 MKQGRVVESGLTDQVLDDPQHPYTQL 250 (258)
T ss_pred EECCEEEEeCCHHHHhcCCCCHHHHH
Confidence 99999999999999986655456544
No 453
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.8e-40 Score=361.58 Aligned_cols=227 Identities=28% Similarity=0.470 Sum_probs=189.5
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEC------CcccCCCChH
Q 048639 885 RIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILID------GKGIKEYNLR 958 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~id------G~di~~~~l~ 958 (1139)
.|.++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++ |.++...+..
T Consensus 10 ~i~~~~~~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~g~~~~~~~~~ 86 (257)
T PRK14246 10 VFNISRLYLYIND---KAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYFGKDIFQIDAI 86 (257)
T ss_pred heeeeeEEEecCC---ceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEECCcccccCCHH
Confidence 5999999999963 469999999999999999999999999999999999999998666655 5777777777
Q ss_pred HHhhhceEEccccccccc-cHHHHhccCCC--cC-CH----HHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHH
Q 048639 959 RLRSQIGLVQQEPLLFSC-SIRNNICYGNE--AA-SE----AEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQK 1030 (1139)
Q Consensus 959 ~lR~~i~~V~Qdp~LF~g-TIreNL~~~~~--~~-sd----~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQr 1030 (1139)
.+|++++|+||+|.+|.+ |+++|+.++.. .. .+ +++.++++..++.+++.. .....+..||+|||
T Consensus 87 ~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-------~~~~~~~~LS~G~~ 159 (257)
T PRK14246 87 KLRKEVGMVFQQPNPFPHLSIYDNIAYPLKSHGIKEKREIKKIVEECLRKVGLWKEVYD-------RLNSPASQLSGGQQ 159 (257)
T ss_pred HHhcceEEEccCCccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCCccchh-------hhcCCcccCCHHHH
Confidence 889999999999999975 99999986421 11 22 235677777787654311 12334567999999
Q ss_pred HHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCE
Q 048639 1031 QRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGE 1109 (1139)
Q Consensus 1031 QrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ 1109 (1139)
||++||||++++|++|||||||++||..++..+.+.|++.. .+ +|+|++||+++.+.. ||++++|++|+
T Consensus 160 qrl~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~---------~~-~tiilvsh~~~~~~~~~d~v~~l~~g~ 229 (257)
T PRK14246 160 QRLTIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELK---------NE-IAIVIVSHNPQQVARVADYVAFLYNGE 229 (257)
T ss_pred HHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHh---------cC-cEEEEEECCHHHHHHhCCEEEEEECCE
Confidence 99999999999999999999999999999999999998764 33 469999999999965 99999999999
Q ss_pred EEEecChhHHhhccCChHHHHH
Q 048639 1110 VVEMGSHSTLVAESQGVYSRLY 1131 (1139)
Q Consensus 1110 ive~G~~~eLl~~~~g~f~~l~ 1131 (1139)
+++.|+++++.+++...|.+.+
T Consensus 230 i~~~g~~~~~~~~~~~~~~~~~ 251 (257)
T PRK14246 230 LVEWGSSNEIFTSPKNELTEKY 251 (257)
T ss_pred EEEECCHHHHHhCCCcHHHHHH
Confidence 9999999999876555565443
No 454
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=3.9e-40 Score=364.02 Aligned_cols=221 Identities=25% Similarity=0.363 Sum_probs=185.0
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCC--------ccEEEECCccCCCCCH
Q 048639 257 IDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPS--------NGDILIDSLNIKDLDL 328 (1139)
Q Consensus 257 i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~--------~G~i~~~g~~~~~~~~ 328 (1139)
|+++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|+ +|+|.++|.++...+.
T Consensus 2 l~~~nl~~~~~~---~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~ 78 (272)
T PRK13547 2 LTADHLHVARRH---RAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDA 78 (272)
T ss_pred eEEEEEEEEECC---EeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCH
Confidence 789999999963 46999999999999999999999999999999999999998 9999999999987777
Q ss_pred HHHhcceEEEecCCC-CCcccHHHHHhcCCCCC-CHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHH
Q 048639 329 KSLRKNIGAVSQEPS-LFTGSLMDNIKVGNMDA-DDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAI 406 (1139)
Q Consensus 329 ~~~~~~i~~v~Q~~~-l~~~ti~~ni~~g~~~~-~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~l 406 (1139)
..+++.++|++|++. ++..|++||+.++.... .............+.+.++.+ |+.+..+....+||||||||++|
T Consensus 79 ~~~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~l 156 (272)
T PRK13547 79 PRLARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALA--GATALVGRDVTTLSGGELARVQF 156 (272)
T ss_pred HHHHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHc--CcHhhhcCCcccCCHHHHHHHHH
Confidence 777888999999986 56789999998863211 000000000111223445554 56666778889999999999999
Q ss_pred HHHHc---------cCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CCeEEEEecCccchhc-cCEEEEEeCcEEEEe
Q 048639 407 ARAIV---------KNPPILLLDEATSALDSESEKLVQEALERAMQ--GRTVILIAHRMSTIVN-ADMIAVVEDGQVTET 474 (1139)
Q Consensus 407 ARal~---------~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~ 474 (1139)
||||+ .+|++|||||||++||+.+.+.+.+.++++.+ ++|+|+|||+++.+.. ||++++|++|++++.
T Consensus 157 aral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~~~~~~~d~i~~l~~G~i~~~ 236 (272)
T PRK13547 157 ARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPNLAARHADRIAMLADGAIVAH 236 (272)
T ss_pred HHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEEe
Confidence 99999 59999999999999999999999999988653 7899999999999865 999999999999999
Q ss_pred cChhhhhc
Q 048639 475 GTHHSLLQ 482 (1139)
Q Consensus 475 g~~~~l~~ 482 (1139)
|+++++..
T Consensus 237 g~~~~~~~ 244 (272)
T PRK13547 237 GAPADVLT 244 (272)
T ss_pred cCHHHHcC
Confidence 99998865
No 455
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=2.8e-40 Score=367.54 Aligned_cols=216 Identities=32% Similarity=0.532 Sum_probs=189.2
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhc
Q 048639 885 RIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQI 964 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i 964 (1139)
.|+++||+.+|.. +..+|+||||+|++||.+|++||||||||||+++|+|++.|++|+|.++|.|...- ...+|+++
T Consensus 4 ~i~~~~l~k~~~~--~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~~G~i~i~G~~~~~~-~~~~~~~i 80 (293)
T COG1131 4 VIEVRNLTKKYGG--DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPTSGEILVLGYDVVKE-PAKVRRRI 80 (293)
T ss_pred eeeecceEEEeCC--CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCceEEEEcCEeCccC-HHHHHhhe
Confidence 4788999999962 24699999999999999999999999999999999999999999999999998765 67899999
Q ss_pred eEEcccccccc-ccHHHHhccCCC------cCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHH
Q 048639 965 GLVQQEPLLFS-CSIRNNICYGNE------AASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIAR 1037 (1139)
Q Consensus 965 ~~V~Qdp~LF~-gTIreNL~~~~~------~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalAR 1037 (1139)
|||||+|.+++ -|++|||.+... ...++++.+.++..+|.+.- +.+ ...||+|||||++||+
T Consensus 81 gy~~~~~~~~~~lT~~e~l~~~~~l~~~~~~~~~~~~~~~l~~~~L~~~~-------~~~----~~~lS~G~kqrl~ia~ 149 (293)
T COG1131 81 GYVPQEPSLYPELTVRENLEFFARLYGLSKEEAEERIEELLELFGLEDKA-------NKK----VRTLSGGMKQRLSIAL 149 (293)
T ss_pred EEEccCCCCCccccHHHHHHHHHHHhCCChhHHHHHHHHHHHHcCCchhh-------Ccc----hhhcCHHHHHHHHHHH
Confidence 99999999775 599999987421 12356789999999987621 222 3569999999999999
Q ss_pred HhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEEEecCh
Q 048639 1038 TLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVVEMGSH 1116 (1139)
Q Consensus 1038 ALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~ 1116 (1139)
||+.+|++|||||||++||+.+...+++.|+++.. .+++||++.||.++.+.. ||||++|++|+++.+|++
T Consensus 150 aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~--------~g~~tvlissH~l~e~~~~~d~v~il~~G~~~~~g~~ 221 (293)
T COG1131 150 ALLHDPELLILDEPTSGLDPESRREIWELLRELAK--------EGGVTILLSTHILEEAEELCDRVIILNDGKIIAEGTP 221 (293)
T ss_pred HHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHh--------CCCcEEEEeCCcHHHHHHhCCEEEEEeCCEEEEeCCH
Confidence 99999999999999999999999999999998761 233569999999999988 999999999999999999
Q ss_pred hHHhhc
Q 048639 1117 STLVAE 1122 (1139)
Q Consensus 1117 ~eLl~~ 1122 (1139)
+++...
T Consensus 222 ~~l~~~ 227 (293)
T COG1131 222 EELKEK 227 (293)
T ss_pred HHHHHh
Confidence 998754
No 456
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=2e-40 Score=356.08 Aligned_cols=205 Identities=32% Similarity=0.576 Sum_probs=173.3
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCC--CCHHHHhcc
Q 048639 257 IDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKD--LDLKSLRKN 334 (1139)
Q Consensus 257 i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~--~~~~~~~~~ 334 (1139)
++++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++.. .+...++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 77 (213)
T cd03262 1 IEIKNLHKSFGD---FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPDSGTIIIDGLKLTDDKKNINELRQK 77 (213)
T ss_pred CEEEEEEEEECC---eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccchhHHHHHhc
Confidence 468999999964 469999999999999999999999999999999999999999999999998853 344567789
Q ss_pred eEEEecCCCCCc-ccHHHHHhcCCC---CCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHH
Q 048639 335 IGAVSQEPSLFT-GSLMDNIKVGNM---DADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAI 410 (1139)
Q Consensus 335 i~~v~Q~~~l~~-~ti~~ni~~g~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal 410 (1139)
++|++|++.++. .|++||+.++.. ....++.. ..+.+.++.+ |++..+.....+||||||||++||||+
T Consensus 78 i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~al 150 (213)
T cd03262 78 VGMVFQQFNLFPHLTVLENITLAPIKVKGMSKAEAE-----ERALELLEKV--GLADKADAYPAQLSGGQQQRVAIARAL 150 (213)
T ss_pred ceEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHH-----HHHHHHHHHc--CCHhHhhhCccccCHHHHHHHHHHHHH
Confidence 999999999986 599999987532 11222211 1123445555 555556777889999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCCeEEEEecCccchhc-cCEEEEEeCcEE
Q 048639 411 VKNPPILLLDEATSALDSESEKLVQEALERAM-QGRTVILIAHRMSTIVN-ADMIAVVEDGQV 471 (1139)
Q Consensus 411 ~~~~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i 471 (1139)
+.+|+++||||||++||+.+.+.+.+.|+++. .++|+|++||+++.+.. ||++++|++|++
T Consensus 151 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~~~~~~~d~i~~l~~g~i 213 (213)
T cd03262 151 AMNPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMGFAREVADRVIFMDDGRI 213 (213)
T ss_pred hcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999999875 47899999999999976 999999999974
No 457
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.5e-40 Score=362.48 Aligned_cols=223 Identities=32% Similarity=0.462 Sum_probs=186.8
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccc--C---CccEEEECCcccCC--CCh
Q 048639 885 RIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYD--P---NEGIILIDGKGIKE--YNL 957 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~--p---~~G~I~idG~di~~--~~l 957 (1139)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++ | ++|+|.+||.++.. .+.
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 81 (252)
T PRK14255 5 IITSSDVHLFYGK---FEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNEDV 81 (252)
T ss_pred eEEEEeEEEEECC---eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccccH
Confidence 4899999999963 369999999999999999999999999999999999975 4 58999999999864 344
Q ss_pred HHHhhhceEEccccccccccHHHHhccCCC--c-----CCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHH
Q 048639 958 RRLRSQIGLVQQEPLLFSCSIRNNICYGNE--A-----ASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQK 1030 (1139)
Q Consensus 958 ~~lR~~i~~V~Qdp~LF~gTIreNL~~~~~--~-----~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQr 1030 (1139)
..+|++++|+||+|.+|..|+++|+.++.. . ..++++.++++.+++.+.+. ........+||||||
T Consensus 82 ~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~-------~~~~~~~~~LS~Gq~ 154 (252)
T PRK14255 82 VQLRKQVGMVFQQPNPFPFSIYENVIYGLRLAGVKDKAVLDEAVETSLKQAAIWDEVK-------DHLHESALSLSGGQQ 154 (252)
T ss_pred HHhcCeEEEEECCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCccchh-------hHHhcCcccCCHHHH
Confidence 567889999999999999999999986411 1 11345666777777754332 122334568999999
Q ss_pred HHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCE
Q 048639 1031 QRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGE 1109 (1139)
Q Consensus 1031 QrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ 1109 (1139)
||++|||||+++|++|||||||++||+.+.+.+.+.|++.. .+ +|+|+|||+++.+.. ||+|++|++|+
T Consensus 155 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~---------~~-~tii~vsH~~~~~~~~~d~i~~l~~G~ 224 (252)
T PRK14255 155 QRVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELR---------DQ-YTIILVTHSMHQASRISDKTAFFLTGN 224 (252)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHH---------hC-CEEEEEECCHHHHHHhCCEEEEEECCE
Confidence 99999999999999999999999999999999999999764 33 469999999999876 99999999999
Q ss_pred EEEecChhHHhhccCChH
Q 048639 1110 VVEMGSHSTLVAESQGVY 1127 (1139)
Q Consensus 1110 ive~G~~~eLl~~~~g~f 1127 (1139)
+++.|++.+...++...|
T Consensus 225 i~~~~~~~~~~~~~~~~~ 242 (252)
T PRK14255 225 LIEFADTKQMFLNPKEKE 242 (252)
T ss_pred EEEeCCHHHHhcCCCChH
Confidence 999999999987654443
No 458
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=5e-40 Score=356.57 Aligned_cols=212 Identities=28% Similarity=0.449 Sum_probs=175.0
Q ss_pred cEEEEeEEEECCCCCC-CccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHH---H
Q 048639 256 NIDIRDVCFAYPSRPD-QLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKS---L 331 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~-~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~---~ 331 (1139)
.|+++|++++|++... .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+... .
T Consensus 6 ~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 85 (228)
T PRK10584 6 IVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARAKL 85 (228)
T ss_pred eEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHHHH
Confidence 5899999999974211 35999999999999999999999999999999999999999999999999988776543 2
Q ss_pred -hcceEEEecCCCCCcc-cHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHH
Q 048639 332 -RKNIGAVSQEPSLFTG-SLMDNIKVGNM--DADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIA 407 (1139)
Q Consensus 332 -~~~i~~v~Q~~~l~~~-ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lA 407 (1139)
++.++|++|++.++.. |++||+.++.. .....+. ...+.+.++.+ |+.......+.+||||||||++||
T Consensus 86 ~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~LS~Ge~qrl~la 158 (228)
T PRK10584 86 RAKHVGFVFQSFMLIPTLNALENVELPALLRGESSRQS-----RNGAKALLEQL--GLGKRLDHLPAQLSGGEQQRVALA 158 (228)
T ss_pred HhheEEEEEcccccCCCcCHHHHHHHHHHhcCCCHHHH-----HHHHHHHHHHc--CCHhHhhCChhhCCHHHHHHHHHH
Confidence 3679999999999875 99999986421 1111111 11223344444 344445566779999999999999
Q ss_pred HHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-C-CCeEEEEecCccchhccCEEEEEeCcEEEEe
Q 048639 408 RAIVKNPPILLLDEATSALDSESEKLVQEALERAM-Q-GRTVILIAHRMSTIVNADMIAVVEDGQVTET 474 (1139)
Q Consensus 408 Ral~~~~~illlDEpts~LD~~~~~~i~~~l~~~~-~-~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~ 474 (1139)
|||+.+|++|||||||++||+.+.+.+.+.|+++. + ++|+|++||+++.+..||++++|++|++++.
T Consensus 159 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~g~i~~~ 227 (228)
T PRK10584 159 RAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQLAARCDRRLRLVNGQLQEE 227 (228)
T ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEec
Confidence 99999999999999999999999999999998874 3 7899999999998877999999999999753
No 459
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=3.7e-40 Score=361.56 Aligned_cols=214 Identities=20% Similarity=0.298 Sum_probs=177.9
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccc--cCCccEEEECCcccCCCChHHH-hh
Q 048639 886 IEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFY--DPNEGIILIDGKGIKEYNLRRL-RS 962 (1139)
Q Consensus 886 I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~--~p~~G~I~idG~di~~~~l~~l-R~ 962 (1139)
|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|+|+. +|++|+|.+||.++...+.... |.
T Consensus 1 l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 77 (243)
T TIGR01978 1 LKIKDLHVSVED---KEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDERARA 77 (243)
T ss_pred CeEeeEEEEECC---EEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCCCCHHHhhcc
Confidence 578999999963 46999999999999999999999999999999999994 7999999999999988877654 45
Q ss_pred hceEEccccccccc-cHHHHhccCCCc---------CC----HHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChH
Q 048639 963 QIGLVQQEPLLFSC-SIRNNICYGNEA---------AS----EAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGG 1028 (1139)
Q Consensus 963 ~i~~V~Qdp~LF~g-TIreNL~~~~~~---------~s----d~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgG 1028 (1139)
.++|+||+|.+|.+ |+++|+.+.... .+ ++++.++++..++.+.. .+..+. ..||||
T Consensus 78 ~i~~v~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~------~~~~~~---~~LS~G 148 (243)
T TIGR01978 78 GLFLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFLKLLKAKLALLGMDEEF------LNRSVN---EGFSGG 148 (243)
T ss_pred ceEeeeccccccCCcCHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHcCCchhh------cccccc---cCcCHH
Confidence 69999999998875 899998643110 11 23466677777764211 122221 249999
Q ss_pred HHHHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc--CCEEEEEe
Q 048639 1029 QKQRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN--SDVIVVMD 1106 (1139)
Q Consensus 1029 QrQrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~--~DrI~vl~ 1106 (1139)
||||++|||||+++|++|||||||++||+.+.+.+.+.|++.. ++++|||+|||+++.+.. ||+|++|+
T Consensus 149 ~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~---------~~~~tvi~vsH~~~~~~~~~~d~i~~l~ 219 (243)
T TIGR01978 149 EKKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLR---------EPDRSFLIITHYQRLLNYIKPDYVHVLL 219 (243)
T ss_pred HHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHH---------HCCcEEEEEEecHHHHHhhcCCeEEEEe
Confidence 9999999999999999999999999999999999999999764 334569999999999976 79999999
Q ss_pred CCEEEEecChhHHh
Q 048639 1107 KGEVVEMGSHSTLV 1120 (1139)
Q Consensus 1107 ~G~ive~G~~~eLl 1120 (1139)
+|++++.|+++++-
T Consensus 220 ~G~i~~~g~~~~~~ 233 (243)
T TIGR01978 220 DGRIVKSGDVELAK 233 (243)
T ss_pred CCEEEEecCHHHhc
Confidence 99999999998654
No 460
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=4.5e-40 Score=352.70 Aligned_cols=204 Identities=31% Similarity=0.559 Sum_probs=177.1
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhce
Q 048639 886 IEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQIG 965 (1139)
Q Consensus 886 I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~ 965 (1139)
++++||+++|+. .++|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++.+.+ .+|++++
T Consensus 1 ~~~~~l~~~~~~-----~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~--~~~~~i~ 73 (213)
T TIGR01277 1 LALDKVRYEYEH-----LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPASGSIKVNDQSHTGLA--PYQRPVS 73 (213)
T ss_pred CeEEeeeEEeCC-----cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEcccCC--hhccceE
Confidence 368999999952 468999999999999999999999999999999999999999999999987643 4678899
Q ss_pred EEcccccccc-ccHHHHhccCC-C-----cCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 048639 966 LVQQEPLLFS-CSIRNNICYGN-E-----AASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIART 1038 (1139)
Q Consensus 966 ~V~Qdp~LF~-gTIreNL~~~~-~-----~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalARA 1038 (1139)
|+||+|.+|. .|+++|+.++. + ...++++.++++..++.+...+.| .+||||||||++||||
T Consensus 74 ~v~q~~~~~~~~t~~en~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrl~lara 142 (213)
T TIGR01277 74 MLFQENNLFAHLTVRQNIGLGLHPGLKLNAEQQEKVVDAAQQVGIADYLDRLP-----------EQLSGGQRQRVALARC 142 (213)
T ss_pred EEeccCccCCCCcHHHHHHhHhhccCCccHHHHHHHHHHHHHcCcHHHhhCCc-----------ccCCHHHHHHHHHHHH
Confidence 9999999987 49999997531 1 123456888999999987766654 3699999999999999
Q ss_pred hcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEEEecC
Q 048639 1039 LLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVVEMGS 1115 (1139)
Q Consensus 1039 Llr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~ 1115 (1139)
++++|+|+||||||++||.++.+.+.+.|++... ..++|+|+|||+++.+.. ||+|++|++|++++.|.
T Consensus 143 l~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~--------~~~~tii~vsh~~~~~~~~~d~v~~l~~g~i~~~~~ 212 (213)
T TIGR01277 143 LVRPNPILLLDEPFSALDPLLREEMLALVKQLCS--------ERQRTLLMVTHHLSDARAIASQIAVVSQGKIKVVSD 212 (213)
T ss_pred HhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHH--------hcCCEEEEEeCCHHHHHhhcCeEEEEECCeEEEecC
Confidence 9999999999999999999999999999997640 224569999999999876 99999999999999874
No 461
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=100.00 E-value=2.7e-39 Score=402.60 Aligned_cols=103 Identities=29% Similarity=0.447 Sum_probs=91.5
Q ss_pred HHHhCCCCCCcc-ccccCCCCChHHHHHHHHHHHHccCC--CEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCCeEEEEec
Q 048639 377 FISQLPDQYSTE-LGQRGVQLSGGQKQRIAIARAIVKNP--PILLLDEATSALDSESEKLVQEALERAM-QGRTVILIAH 452 (1139)
Q Consensus 377 ~i~~l~~g~~t~-i~~~g~~LSgGqkqRi~lARal~~~~--~illlDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH 452 (1139)
+++.+ |++.. .+....+|||||||||+|||||..+| ++|||||||++||+.....+.+.|+++. +|.|||+|+|
T Consensus 472 ~L~~v--GL~~l~l~r~~~~LSgGE~QRv~LA~aL~~~~~~~llILDEPtagLd~~~~~~L~~~L~~L~~~G~TVIvVeH 549 (943)
T PRK00349 472 FLVDV--GLDYLTLSRSAGTLSGGEAQRIRLATQIGSGLTGVLYVLDEPSIGLHQRDNDRLIETLKHLRDLGNTLIVVEH 549 (943)
T ss_pred Hhhcc--ccCCCCCCCchhhCCHHHHHHHHHHHHHhhCCCCcEEEecCCccCCCHHHHHHHHHHHHHHHhCCCEEEEEeC
Confidence 45555 55543 67888999999999999999999997 9999999999999999999999998875 4899999999
Q ss_pred CccchhccCEEEEE------eCcEEEEecChhhhh
Q 048639 453 RMSTIVNADMIAVV------EDGQVTETGTHHSLL 481 (1139)
Q Consensus 453 ~~~~~~~~d~i~~l------~~G~i~~~g~~~~l~ 481 (1139)
+++.+..||+|++| ++|+|+.+|+++++.
T Consensus 550 ~~~~i~~aD~vi~LgpgaG~~~G~iv~~g~~~e~~ 584 (943)
T PRK00349 550 DEDTIRAADYIVDIGPGAGVHGGEVVASGTPEEIM 584 (943)
T ss_pred CHHHHHhCCEEEEeccccCCCCCEEeeccCHHHHh
Confidence 99999889999999 899999999888763
No 462
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.4e-40 Score=363.16 Aligned_cols=220 Identities=31% Similarity=0.485 Sum_probs=187.4
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccC-----CccEEEECCcccCC--CCh
Q 048639 885 RIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDP-----NEGIILIDGKGIKE--YNL 957 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p-----~~G~I~idG~di~~--~~l 957 (1139)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| .+|+|.+||.++.. .+.
T Consensus 20 ~l~~~nl~~~~~~---~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~l~~~~~~~ 96 (274)
T PRK14265 20 VFEVEGVKVFYGG---FLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRDRNIYDSQINS 96 (274)
T ss_pred eEEEeeEEEEeCC---eEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECCEecccccchh
Confidence 5999999999963 3699999999999999999999999999999999999864 58999999999864 344
Q ss_pred HHHhhhceEEccccccccccHHHHhccCCC-----cCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHH
Q 048639 958 RRLRSQIGLVQQEPLLFSCSIRNNICYGNE-----AASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQR 1032 (1139)
Q Consensus 958 ~~lR~~i~~V~Qdp~LF~gTIreNL~~~~~-----~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQr 1032 (1139)
..+|++++|+||++.+|..|+++|+.++.. ...++++.++++.+++.+.+.. ........||||||||
T Consensus 97 ~~~~~~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LSgGq~qr 169 (274)
T PRK14265 97 VKLRRQVGMVFQRPNPFPKSIYENIAFAPRANGYKGNLDELVEDSLRRAAIWEEVKD-------KLKEKGTALSGGQQQR 169 (274)
T ss_pred HHHhhcEEEEccCCccccccHHHHHHhHHHhcCchHHHHHHHHHHHHHcccchhhHH-------HhcCCcccCCHHHHHH
Confidence 567899999999999998999999987521 1124456777888887655432 1234456799999999
Q ss_pred HHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEe-----
Q 048639 1033 IAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMD----- 1106 (1139)
Q Consensus 1033 lalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~----- 1106 (1139)
++|||||+++|+||||||||++||+.+...+.+.|++.. ++ +|||+|+|+++.+.. ||||++|+
T Consensus 170 v~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~---------~~-~tiii~sH~~~~~~~~~d~i~~l~~~~~~ 239 (274)
T PRK14265 170 LCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELK---------EQ-YTIIMVTHNMQQASRVADWTAFFNTEIDE 239 (274)
T ss_pred HHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHh---------cC-CEEEEEeCCHHHHHHhCCEEEEEeccccc
Confidence 999999999999999999999999999999999999764 33 569999999999976 99999997
Q ss_pred ----CCEEEEecChhHHhhccC
Q 048639 1107 ----KGEVVEMGSHSTLVAESQ 1124 (1139)
Q Consensus 1107 ----~G~ive~G~~~eLl~~~~ 1124 (1139)
+|++++.|+++++..++.
T Consensus 240 ~~~~~G~~~~~g~~~~~~~~~~ 261 (274)
T PRK14265 240 YGKRRGKLVEFSPTEQMFGSPQ 261 (274)
T ss_pred ccccCceEEEeCCHHHHHhCCC
Confidence 899999999999986543
No 463
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=7.3e-40 Score=362.53 Aligned_cols=227 Identities=26% Similarity=0.440 Sum_probs=189.6
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCC---ccEEEECCcccCCC-----C
Q 048639 885 RIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPN---EGIILIDGKGIKEY-----N 956 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~---~G~I~idG~di~~~-----~ 956 (1139)
-|+++||+++|++ .++|+|+||+|++||+++|+|+||||||||+++|.|+++|+ +|+|.+||.++... +
T Consensus 4 ~l~~~nl~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~ 80 (262)
T PRK09984 4 IIRVEKLAKTFNQ---HQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARD 80 (262)
T ss_pred EEEEeeEEEEeCC---eEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchh
Confidence 4899999999963 46999999999999999999999999999999999999886 49999999998654 3
Q ss_pred hHHHhhhceEEcccccccc-ccHHHHhccCCC--------------cCCHHHHHHHHHHcCchHHHhhCCCCccccccCC
Q 048639 957 LRRLRSQIGLVQQEPLLFS-CSIRNNICYGNE--------------AASEAEIVEVSKKANIHDFISSLPDGYDTVVGEK 1021 (1139)
Q Consensus 957 l~~lR~~i~~V~Qdp~LF~-gTIreNL~~~~~--------------~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~ 1021 (1139)
...+|++++|+||++.+|. .|+++|+.++.. ...++++.++++..++.+..+. .
T Consensus 81 ~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~ 149 (262)
T PRK09984 81 IRKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFAHQ-----------R 149 (262)
T ss_pred HHHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCHHHHhC-----------C
Confidence 4567889999999999887 599999986421 1123457778888888665433 2
Q ss_pred CCCCChHHHHHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CC
Q 048639 1022 GCQLSGGQKQRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SD 1100 (1139)
Q Consensus 1022 G~~LSgGQrQrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~D 1100 (1139)
...||||||||++|||||+.+|++|||||||++||.++.+.+.+.|++... ..++|+|++||+++.+.. ||
T Consensus 150 ~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--------~~g~tvii~tH~~~~~~~~~d 221 (262)
T PRK09984 150 VSTLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQ--------NDGITVVVTLHQVDYALRYCE 221 (262)
T ss_pred ccccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHH--------hcCCEEEEEeCCHHHHHHhCC
Confidence 357999999999999999999999999999999999999999999997640 224569999999998765 99
Q ss_pred EEEEEeCCEEEEecChhHHhhccCChHHHHHHHHhh
Q 048639 1101 VIVVMDKGEVVEMGSHSTLVAESQGVYSRLYQLQAF 1136 (1139)
Q Consensus 1101 rI~vl~~G~ive~G~~~eLl~~~~g~f~~l~~~~~~ 1136 (1139)
+|++|++|++++.|+++++ + .....+++.....
T Consensus 222 ~i~~l~~g~i~~~g~~~~~-~--~~~~~~~~~~~~~ 254 (262)
T PRK09984 222 RIVALRQGHVFYDGSSQQF-D--NERFDHLYRSINR 254 (262)
T ss_pred EEEEEECCEEEEeCCHHHh-c--cHHHHHHHhhhhc
Confidence 9999999999999999997 2 3456666655443
No 464
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=8e-40 Score=362.24 Aligned_cols=230 Identities=26% Similarity=0.437 Sum_probs=185.9
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCC---ccEEEECCccCCCC-----C
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPS---NGDILIDSLNIKDL-----D 327 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~---~G~i~~~g~~~~~~-----~ 327 (1139)
.|+++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|+ +|+|.++|.++... +
T Consensus 4 ~l~~~nl~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~ 80 (262)
T PRK09984 4 IIRVEKLAKTFNQ---HQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARD 80 (262)
T ss_pred EEEEeeEEEEeCC---eEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchh
Confidence 5899999999963 46999999999999999999999999999999999999986 49999999988643 2
Q ss_pred HHHHhcceEEEecCCCCCc-ccHHHHHhcCCCCCCH--H---HHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHH
Q 048639 328 LKSLRKNIGAVSQEPSLFT-GSLMDNIKVGNMDADD--E---QIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQK 401 (1139)
Q Consensus 328 ~~~~~~~i~~v~Q~~~l~~-~ti~~ni~~g~~~~~~--~---~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqk 401 (1139)
...+++.++|+||++.+|. .|++||+.++...... . ..........+.+.++.+ |+.......+.+||||||
T Consensus 81 ~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~ 158 (262)
T PRK09984 81 IRKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRV--GMVHFAHQRVSTLSGGQQ 158 (262)
T ss_pred HHHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHc--CCHHHHhCCccccCHHHH
Confidence 3456788999999999887 4999999876421100 0 000011112234455555 444455677889999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChh
Q 048639 402 QRIAIARAIVKNPPILLLDEATSALDSESEKLVQEALERAM--QGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHH 478 (1139)
Q Consensus 402 qRi~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~ 478 (1139)
||++|||||+.+|++|||||||++||+.+.+.+.+.|+++. +++|+|++||+++.+.. ||+|++|++|++++.|+++
T Consensus 159 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~~~~~~~d~i~~l~~g~i~~~g~~~ 238 (262)
T PRK09984 159 QRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALRYCERIVALRQGHVFYDGSSQ 238 (262)
T ss_pred HHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999999999999875 37999999999998765 9999999999999999999
Q ss_pred hhhccchHHHHHHh
Q 048639 479 SLLQTSDFYNRLFT 492 (1139)
Q Consensus 479 ~l~~~~~~~~~~~~ 492 (1139)
++ ......+++.
T Consensus 239 ~~--~~~~~~~~~~ 250 (262)
T PRK09984 239 QF--DNERFDHLYR 250 (262)
T ss_pred Hh--ccHHHHHHHh
Confidence 86 2334555554
No 465
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.7e-40 Score=363.17 Aligned_cols=218 Identities=32% Similarity=0.488 Sum_probs=181.4
Q ss_pred ccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCC-----CccEEEECCccCCC--CC
Q 048639 255 GNIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDP-----SNGDILIDSLNIKD--LD 327 (1139)
Q Consensus 255 ~~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~-----~~G~i~~~g~~~~~--~~ 327 (1139)
+.++++|++++|++ +++|+|+||++++||+++|+|+||||||||+++|+|+++| ++|+|.++|+++.. .+
T Consensus 6 ~~l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 82 (259)
T PRK14260 6 PAIKVKDLSFYYNT---SKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRIN 82 (259)
T ss_pred ceEEEEEEEEEECC---eEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccc
Confidence 35899999999963 4599999999999999999999999999999999999985 48999999998854 34
Q ss_pred HHHHhcceEEEecCCCCCcccHHHHHhcCCCC---CCH----HHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHH
Q 048639 328 LKSLRKNIGAVSQEPSLFTGSLMDNIKVGNMD---ADD----EQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQ 400 (1139)
Q Consensus 328 ~~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~---~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGq 400 (1139)
...++.+++|++|++.+|+.|++||+.++... ... +.+.++++..++.+.+ .......+.+|||||
T Consensus 83 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-------~~~~~~~~~~LS~G~ 155 (259)
T PRK14260 83 INRLRRQIGMVFQRPNPFPMSIYENVAYGVRISAKLPQADLDEIVESALKGAALWQEV-------KDKLNKSALGLSGGQ 155 (259)
T ss_pred hHhhhhheEEEecccccCCccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchh-------hhHhcCCcccCCHHH
Confidence 45678899999999999999999999875311 111 1122223222221111 223456778999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhc-cCEEEEEe-----CcEEEEe
Q 048639 401 KQRIAIARAIVKNPPILLLDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVN-ADMIAVVE-----DGQVTET 474 (1139)
Q Consensus 401 kqRi~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~-----~G~i~~~ 474 (1139)
|||++|||||+++|+++||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||++++|+ +|++++.
T Consensus 156 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~i~~~~d~i~~l~~~~~~~G~i~~~ 235 (259)
T PRK14260 156 QQRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRSELTIAIVTHNMQQATRVSDFTAFFSTDESRIGQMVEF 235 (259)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCeEEEEeccCCCCceEEEe
Confidence 99999999999999999999999999999999999999988777999999999999876 99999998 5999999
Q ss_pred cChhhhhc
Q 048639 475 GTHHSLLQ 482 (1139)
Q Consensus 475 g~~~~l~~ 482 (1139)
|+++++.+
T Consensus 236 ~~~~~~~~ 243 (259)
T PRK14260 236 GVTTQIFS 243 (259)
T ss_pred CCHHHHhc
Confidence 99999854
No 466
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.3e-40 Score=351.36 Aligned_cols=205 Identities=25% Similarity=0.465 Sum_probs=168.3
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcceE
Q 048639 257 IDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNIG 336 (1139)
Q Consensus 257 i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 336 (1139)
|+++|++++|++. . .|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. .++.++
T Consensus 1 i~~~~l~~~~~~~---~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~--~~~~i~ 73 (211)
T cd03298 1 VRLDKIRFSYGEQ---P--MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPP--ADRPVS 73 (211)
T ss_pred CEEEeEEEEeCCE---e--cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCH--hHccEE
Confidence 4789999999632 2 39999999999999999999999999999999999999999999999876554 357899
Q ss_pred EEecCCCCCcc-cHHHHHhcCCC-CCC-HHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHccC
Q 048639 337 AVSQEPSLFTG-SLMDNIKVGNM-DAD-DEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVKN 413 (1139)
Q Consensus 337 ~v~Q~~~l~~~-ti~~ni~~g~~-~~~-~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~~ 413 (1139)
|++|++.+|.. |++||+.++.. ... .++. ...+.+.++.+ |++........+||||||||++||||++.+
T Consensus 74 ~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~ia~al~~~ 146 (211)
T cd03298 74 MLFQENNLFAHLTVEQNVGLGLSPGLKLTAED-----RQAIEVALARV--GLAGLEKRLPGELSGGERQRVALARVLVRD 146 (211)
T ss_pred EEecccccCCCCcHHHHHhcccccccCccHHH-----HHHHHHHHHHc--CCHHHHhCCcccCCHHHHHHHHHHHHHhcC
Confidence 99999999975 99999987642 111 0100 11112233333 333334455679999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCCeEEEEecCccchhc-cCEEEEEeCcEEEEec
Q 048639 414 PPILLLDEATSALDSESEKLVQEALERAM--QGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETG 475 (1139)
Q Consensus 414 ~~illlDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g 475 (1139)
|+++||||||++||+.++..+.+.|+++. .++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 147 p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 147 KPVLLLDEPFAALDPALRAEMLDLVLDLHAETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 99999999999999999999999998874 37899999999999976 9999999999998654
No 467
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.2e-40 Score=365.19 Aligned_cols=219 Identities=32% Similarity=0.542 Sum_probs=180.7
Q ss_pred ccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccC-----CCccEEEECCccCCC--CC
Q 048639 255 GNIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYD-----PSNGDILIDSLNIKD--LD 327 (1139)
Q Consensus 255 ~~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~-----~~~G~i~~~g~~~~~--~~ 327 (1139)
..|+++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|.++.. .+
T Consensus 38 ~~l~i~~l~~~~~~---~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G~~i~~~~~~ 114 (285)
T PRK14254 38 TVIEARDLNVFYGD---EQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRGKNVYDADVD 114 (285)
T ss_pred ceEEEEEEEEEECC---EeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccc
Confidence 45999999999963 469999999999999999999999999999999999997 689999999998854 34
Q ss_pred HHHHhcceEEEecCCCCCcccHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHHhC--CCCCCccccccCCCCChHHHHH
Q 048639 328 LKSLRKNIGAVSQEPSLFTGSLMDNIKVGNMD--ADDEQIYNASMMANAHSFISQL--PDQYSTELGQRGVQLSGGQKQR 403 (1139)
Q Consensus 328 ~~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l--~~g~~t~i~~~g~~LSgGqkqR 403 (1139)
...+++.++|++|++.+|+.|++||+.++... ... +.. ..+.+.++.+ ........++++.+||||||||
T Consensus 115 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~-~~~-----~~~~~~l~~~~l~~~i~~~~~~~~~~LSgGe~qr 188 (285)
T PRK14254 115 PVALRRRIGMVFQKPNPFPKSIYDNVAYGLKIQGYDG-DID-----ERVEESLRRAALWDEVKDQLDSSGLDLSGGQQQR 188 (285)
T ss_pred hHhhhccEEEEecCCccCcCCHHHHHHHHHHHcCCcH-HHH-----HHHHHHHHHcCCCchhHHHHhCCcccCCHHHHHH
Confidence 55678899999999999988999999875211 111 111 1122233333 1111124567788999999999
Q ss_pred HHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhc-cCEEE-EEeCcEEEEecChhhhh
Q 048639 404 IAIARAIVKNPPILLLDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVN-ADMIA-VVEDGQVTETGTHHSLL 481 (1139)
Q Consensus 404 i~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~-~l~~G~i~~~g~~~~l~ 481 (1139)
++|||||+++|+||||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||+++ +|++|+|++.|+++++.
T Consensus 189 v~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~~~tiii~tH~~~~i~~~~dri~v~l~~G~i~~~g~~~~~~ 268 (285)
T PRK14254 189 LCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAEEYTVVIVTHNMQQAARISDKTAVFLTGGELVEFDDTDKIF 268 (285)
T ss_pred HHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEeeCCEEEEeCCHHHHH
Confidence 99999999999999999999999999999999999988767899999999999876 99975 57999999999998875
Q ss_pred c
Q 048639 482 Q 482 (1139)
Q Consensus 482 ~ 482 (1139)
+
T Consensus 269 ~ 269 (285)
T PRK14254 269 E 269 (285)
T ss_pred h
Confidence 4
No 468
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.3e-40 Score=368.35 Aligned_cols=220 Identities=33% Similarity=0.516 Sum_probs=187.7
Q ss_pred ccEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccc-----CCccEEEECCcccCCC--C
Q 048639 884 GRIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYD-----PNEGIILIDGKGIKEY--N 956 (1139)
Q Consensus 884 g~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~-----p~~G~I~idG~di~~~--~ 956 (1139)
..|+++||+++|++ .++|+++||+|++||++||+|+||||||||+++|+|+++ |++|+|.+||.++... +
T Consensus 44 ~~l~i~nl~~~~~~---~~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g~~i~~~~~~ 120 (305)
T PRK14264 44 AKLSVEDLDVYYGD---DHALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDGQDIYQDGVN 120 (305)
T ss_pred ceEEEEEEEEEeCC---eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccc
Confidence 35999999999964 369999999999999999999999999999999999986 6899999999998753 4
Q ss_pred hHHHhhhceEEccccccccccHHHHhccCCC-------------------cCCHHHHHHHHHHcCchHHHhhCCCCcccc
Q 048639 957 LRRLRSQIGLVQQEPLLFSCSIRNNICYGNE-------------------AASEAEIVEVSKKANIHDFISSLPDGYDTV 1017 (1139)
Q Consensus 957 l~~lR~~i~~V~Qdp~LF~gTIreNL~~~~~-------------------~~sd~ei~~al~~~~l~~~i~~lp~gldt~ 1017 (1139)
...+|++++|+||++.+|++|+++|+.++.. ...++++.++++.+++.+.+ ++.
T Consensus 121 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~ 193 (305)
T PRK14264 121 LVELRKRVGMVFQSPNPFPKSIRENISYGPRKHGDINTGLLARLLGRDDKDAEDELVERSLRQAALWDEV-------NDR 193 (305)
T ss_pred HHHHhhceEEEccCCccccccHHHHHHhHHhhcccccccccccccccCchHHHHHHHHHHHHHcCCchhh-------hHH
Confidence 5678899999999999999999999986421 01234567777777765433 233
Q ss_pred ccCCCCCCChHHHHHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhh
Q 048639 1018 VGEKGCQLSGGQKQRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVI 1097 (1139)
Q Consensus 1018 v~e~G~~LSgGQrQrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~ 1097 (1139)
......+||||||||++|||||+++|+||||||||++||+.+...+.+.|+++. ++ .|+|+|||+++.+.
T Consensus 194 ~~~~~~~LSgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~---------~~-~tiiivtH~~~~i~ 263 (305)
T PRK14264 194 LDDNALGLSGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELA---------EE-YTVVVVTHNMQQAA 263 (305)
T ss_pred hcCccccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh---------cC-CEEEEEEcCHHHHH
Confidence 455567899999999999999999999999999999999999999999999865 33 46999999999987
Q ss_pred c-CCEE-EEEeCCEEEEecChhHHhhcc
Q 048639 1098 N-SDVI-VVMDKGEVVEMGSHSTLVAES 1123 (1139)
Q Consensus 1098 ~-~DrI-~vl~~G~ive~G~~~eLl~~~ 1123 (1139)
. ||+| ++|++|++++.|+++++.+.+
T Consensus 264 ~~~d~i~~~l~~G~i~~~g~~~~~~~~~ 291 (305)
T PRK14264 264 RISDQTAVFLTGGELVEYDDTDKIFENP 291 (305)
T ss_pred HhcCEEEEEecCCEEEEeCCHHHHHhCc
Confidence 6 9997 578999999999999998653
No 469
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=7.4e-40 Score=360.55 Aligned_cols=228 Identities=27% Similarity=0.392 Sum_probs=186.6
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccC----CccEEEECCcccCCCChHHH
Q 048639 885 RIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDP----NEGIILIDGKGIKEYNLRRL 960 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p----~~G~I~idG~di~~~~l~~l 960 (1139)
.|+++||+++| + .++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.+||.+++.. +..
T Consensus 4 ~l~~~~l~~~~-~---~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~i~~~--~~~ 77 (254)
T PRK10418 4 QIELRNIALQA-A---QPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKPVAPC--ALR 77 (254)
T ss_pred EEEEeCeEEEe-c---cceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCeecccc--ccc
Confidence 48999999999 2 3599999999999999999999999999999999999999 999999999998632 223
Q ss_pred hhhceEEccccc-ccc--ccHHHHhccC----CCcCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHH
Q 048639 961 RSQIGLVQQEPL-LFS--CSIRNNICYG----NEAASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRI 1033 (1139)
Q Consensus 961 R~~i~~V~Qdp~-LF~--gTIreNL~~~----~~~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrl 1033 (1139)
++.++||||+|. .|. .|+.+|+... .....+++++++++.+++.++ ++.++.....||||||||+
T Consensus 78 ~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~--------~~~~~~~~~~LS~Gq~qrv 149 (254)
T PRK10418 78 GRKIATIMQNPRSAFNPLHTMHTHARETCLALGKPADDATLTAALEAVGLENA--------ARVLKLYPFEMSGGMLQRM 149 (254)
T ss_pred cceEEEEecCCccccCccccHHHHHHHHHHHcCCChHHHHHHHHHHHcCCCCh--------hhhhhcCCcccCHHHHHHH
Confidence 467999999985 343 5777776431 122345678888998888653 1123344568999999999
Q ss_pred HHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEEE
Q 048639 1034 AIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVVE 1112 (1139)
Q Consensus 1034 alARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ive 1112 (1139)
+|||||+++|+||||||||++||+.+.+.+.+.|++... ..++|||++||+++.+.+ ||||++|++|++++
T Consensus 150 ~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~--------~~g~til~~sH~~~~~~~~~d~v~~l~~G~i~~ 221 (254)
T PRK10418 150 MIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQ--------KRALGMLLVTHDMGVVARLADDVAVMSHGRIVE 221 (254)
T ss_pred HHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHH--------hcCcEEEEEecCHHHHHHhCCEEEEEECCEEEE
Confidence 999999999999999999999999999999999987641 224569999999999875 99999999999999
Q ss_pred ecChhHHhhccCC-hHHHHHHHH
Q 048639 1113 MGSHSTLVAESQG-VYSRLYQLQ 1134 (1139)
Q Consensus 1113 ~G~~~eLl~~~~g-~f~~l~~~~ 1134 (1139)
.|+++++.+++.. .++.++..+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~ 244 (254)
T PRK10418 222 QGDVETLFNAPKHAVTRSLVSAH 244 (254)
T ss_pred ecCHHHHhhCCCCHHHHHHHHhh
Confidence 9999999876444 455566544
No 470
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.4e-40 Score=376.21 Aligned_cols=211 Identities=27% Similarity=0.461 Sum_probs=179.4
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCC----CHHHHh
Q 048639 257 IDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDL----DLKSLR 332 (1139)
Q Consensus 257 i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~----~~~~~~ 332 (1139)
|++ |++++|++ . .+ |+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++... +....+
T Consensus 2 l~~-~l~k~~~~---~-~~-~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~~~~~~~~~~~~~~~ 75 (352)
T PRK11144 2 LEL-NFKQQLGD---L-CL-TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQKGRIVLNGRVLFDAEKGICLPPEK 75 (352)
T ss_pred eEE-EEEEEeCC---E-EE-EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccchhh
Confidence 567 99999963 2 23 89999999999999999999999999999999999999999999988642 234457
Q ss_pred cceEEEecCCCCCc-ccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHc
Q 048639 333 KNIGAVSQEPSLFT-GSLMDNIKVGNMDADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIV 411 (1139)
Q Consensus 333 ~~i~~v~Q~~~l~~-~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~ 411 (1139)
++++||+|++.+|+ .|++||+.++......+++ .+.++.+ |++......+.+||||||||++|||||+
T Consensus 76 ~~i~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~---------~~~l~~~--gl~~~~~~~~~~LSgGq~qRvalaraL~ 144 (352)
T PRK11144 76 RRIGYVFQDARLFPHYKVRGNLRYGMAKSMVAQF---------DKIVALL--GIEPLLDRYPGSLSGGEKQRVAIGRALL 144 (352)
T ss_pred CCEEEEcCCcccCCCCcHHHHHHhhhhhhhHHHH---------HHHHHHc--CCchhhhCCcccCCHHHHHHHHHHHHHH
Confidence 89999999999996 5999999987532222222 2344444 4555566778899999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhccc
Q 048639 412 KNPPILLLDEATSALDSESEKLVQEALERAMQ--GRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQTS 484 (1139)
Q Consensus 412 ~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~ 484 (1139)
.+|++|||||||++||+.+++.+.+.|+++.+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++..+.
T Consensus 145 ~~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tii~vTHd~~~~~~~~d~i~~l~~G~i~~~g~~~~i~~~p 220 (352)
T PRK11144 145 TAPELLLMDEPLASLDLPRKRELLPYLERLAREINIPILYVSHSLDEILRLADRVVVLEQGKVKAFGPLEEVWASS 220 (352)
T ss_pred cCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEeCCEEEEecCHHHHHhCc
Confidence 99999999999999999999999999988753 7899999999998866 9999999999999999999997653
No 471
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-39 Score=353.86 Aligned_cols=215 Identities=30% Similarity=0.485 Sum_probs=177.0
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcceE
Q 048639 257 IDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNIG 336 (1139)
Q Consensus 257 i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 336 (1139)
++++|++++|++ . ..|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.. ++.++
T Consensus 2 l~~~~l~~~~~~---~--~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~--~~~i~ 74 (232)
T PRK10771 2 LKLTDITWLYHH---L--PMRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPASGSLTLNGQDHTTTPPS--RRPVS 74 (232)
T ss_pred eEEEEEEEEECC---c--cceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCeecCcCChh--hccEE
Confidence 789999999963 2 2399999999999999999999999999999999999999999999988765432 56899
Q ss_pred EEecCCCCCcc-cHHHHHhcCCC-CCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHccCC
Q 048639 337 AVSQEPSLFTG-SLMDNIKVGNM-DADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVKNP 414 (1139)
Q Consensus 337 ~v~Q~~~l~~~-ti~~ni~~g~~-~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~~~ 414 (1139)
|++|++.+|.+ |++||+.++.. .....+ .....+.+.++.+ |++..+......||||||||++||||++++|
T Consensus 75 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~----~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral~~~p 148 (232)
T PRK10771 75 MLFQENNLFSHLTVAQNIGLGLNPGLKLNA----AQREKLHAIARQM--GIEDLLARLPGQLSGGQRQRVALARCLVREQ 148 (232)
T ss_pred EEecccccccCCcHHHHHhcccccccCCCH----HHHHHHHHHHHHc--CcHHHHhCCcccCCHHHHHHHHHHHHHhcCC
Confidence 99999999875 99999987531 110000 0111122334433 3444455566799999999999999999999
Q ss_pred CEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhccc
Q 048639 415 PILLLDEATSALDSESEKLVQEALERAMQ--GRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQTS 484 (1139)
Q Consensus 415 ~illlDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~ 484 (1139)
+++||||||++||+.+.+.+.+.++++.+ ++|+|++||+++.+.. ||++++|++|++++.|+++++....
T Consensus 149 ~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~~~~~~~~~ 221 (232)
T PRK10771 149 PILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLEDAARIAPRSLVVADGRIAWDGPTDELLSGK 221 (232)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhCh
Confidence 99999999999999999999999988643 7899999999999876 9999999999999999999887543
No 472
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=3e-40 Score=372.09 Aligned_cols=203 Identities=22% Similarity=0.440 Sum_probs=172.9
Q ss_pred CccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcceEEEecCCCCCcc-cHH
Q 048639 272 QLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNIGAVSQEPSLFTG-SLM 350 (1139)
Q Consensus 272 ~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~-ti~ 350 (1139)
+++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. ....+++++||+||++.++.. |++
T Consensus 6 ~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~-~~~~~~~~i~~~~q~~~~~~~~tv~ 84 (302)
T TIGR01188 6 FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTARVAGYDVVR-EPRKVRRSIGIVPQYASVDEDLTGR 84 (302)
T ss_pred eeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-CHHHHHhhcEEecCCCCCCCCCcHH
Confidence 469999999999999999999999999999999999999999999999999865 345678899999999999875 999
Q ss_pred HHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCH
Q 048639 351 DNIKVGNM--DADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVKNPPILLLDEATSALDS 428 (1139)
Q Consensus 351 ~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~~~~illlDEpts~LD~ 428 (1139)
||+.+... .....+.. ..+.+.++.+ |+.........+||||||||++|||||+++|++|||||||++||+
T Consensus 85 e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~ 157 (302)
T TIGR01188 85 ENLEMMGRLYGLPKDEAE-----ERAEELLELF--ELGEAADRPVGTYSGGMRRRLDIAASLIHQPDVLFLDEPTTGLDP 157 (302)
T ss_pred HHHHHHHHHcCCCHHHHH-----HHHHHHHHHc--CChhHhCCchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCH
Confidence 99987421 11112111 1223445555 444455667789999999999999999999999999999999999
Q ss_pred HhHHHHHHHHHHHc-CCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhc
Q 048639 429 ESEKLVQEALERAM-QGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQ 482 (1139)
Q Consensus 429 ~~~~~i~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 482 (1139)
.+.+.+.+.|+++. +|+|+|++||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 158 ~~~~~l~~~l~~~~~~g~tvi~~sH~~~~~~~~~d~v~~l~~G~i~~~g~~~~l~~ 213 (302)
T TIGR01188 158 RTRRAIWDYIRALKEEGVTILLTTHYMEEADKLCDRIAIIDHGRIIAEGTPEELKR 213 (302)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHH
Confidence 99999999998875 47999999999999976 99999999999999999998854
No 473
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.9e-40 Score=361.07 Aligned_cols=220 Identities=30% Similarity=0.541 Sum_probs=181.0
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCC-----CccEEEECCccCCCC--CH
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDP-----SNGDILIDSLNIKDL--DL 328 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~-----~~G~i~~~g~~~~~~--~~ 328 (1139)
.|+++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++| ++|+|.++|.++... +.
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~ 79 (250)
T PRK14262 3 IIEIENFSAYYGE---KKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDV 79 (250)
T ss_pred eEEEEeeEEEeCC---ceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhH
Confidence 4899999999963 4699999999999999999999999999999999999984 899999999988643 33
Q ss_pred HHHhcceEEEecCCCCCcccHHHHHhcCCCC--C-CHHHHHHHHHHhcHHHHHHhCC--CCCCccccccCCCCChHHHHH
Q 048639 329 KSLRKNIGAVSQEPSLFTGSLMDNIKVGNMD--A-DDEQIYNASMMANAHSFISQLP--DQYSTELGQRGVQLSGGQKQR 403 (1139)
Q Consensus 329 ~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~--~-~~~~~~~~~~~~~~~~~i~~l~--~g~~t~i~~~g~~LSgGqkqR 403 (1139)
..+++.++|++|++.+|+.|++||+.++... . ..++..+. +.+.++.+. ...+...+..+.+||||||||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qr 154 (250)
T PRK14262 80 TEYRKKVGMVFQKPTPFPMSIYDNVAFGPRIHGVKSKHKLDRI-----VEESLKKAALWDEVKSELNKPGTRLSGGQQQR 154 (250)
T ss_pred HHhhhhEEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHH-----HHHHHHHcCCCchhHHHHhCChhhcCHHHHHH
Confidence 4567889999999999999999999875211 1 11111111 112222221 111233567788999999999
Q ss_pred HHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhc
Q 048639 404 IAIARAIVKNPPILLLDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQ 482 (1139)
Q Consensus 404 i~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 482 (1139)
++|||||+.+|+++||||||++||+.++..+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++.+
T Consensus 155 ~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tili~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 234 (250)
T PRK14262 155 LCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSENYTIVIVTHNIGQAIRIADYIAFMYRGELIEYGPTREIVE 234 (250)
T ss_pred HHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHHh
Confidence 99999999999999999999999999999999999988778999999999998765 99999999999999999998864
Q ss_pred c
Q 048639 483 T 483 (1139)
Q Consensus 483 ~ 483 (1139)
.
T Consensus 235 ~ 235 (250)
T PRK14262 235 R 235 (250)
T ss_pred C
Confidence 3
No 474
>COG4619 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=9.6e-41 Score=317.44 Aligned_cols=195 Identities=33% Similarity=0.538 Sum_probs=169.5
Q ss_pred CCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcceEEEecCCCCCcccHH
Q 048639 271 DQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNIGAVSQEPSLFTGSLM 350 (1139)
Q Consensus 271 ~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~ 350 (1139)
+.++|+|+||++.+||+++|+||||||||||+|.++-+.+|++|++++.|++++.++++.+|++|+||.|.|.||.+||.
T Consensus 15 ~a~il~~isl~v~~Ge~iaitGPSG~GKStllk~va~Lisp~~G~l~f~Ge~vs~~~pea~Rq~VsY~~Q~paLfg~tVe 94 (223)
T COG4619 15 DAKILNNISLSVRAGEFIAITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDVSTLKPEAYRQQVSYCAQTPALFGDTVE 94 (223)
T ss_pred CCeeecceeeeecCCceEEEeCCCCccHHHHHHHHHhccCCCCceEEEcCccccccChHHHHHHHHHHHcCccccccchh
Confidence 56799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHh
Q 048639 351 DNIKVGNMDADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVKNPPILLLDEATSALDSES 430 (1139)
Q Consensus 351 ~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~~~~illlDEpts~LD~~~ 430 (1139)
||+.|... ....+- ....+.+++.++.- .++.+..+..+||||||||+||+|-|---|+||+|||||||||+.+
T Consensus 95 DNlifP~~-~r~rr~----dr~aa~~llar~~l-~~~~L~k~it~lSGGE~QriAliR~Lq~~P~ILLLDE~TsALD~~n 168 (223)
T COG4619 95 DNLIFPWQ-IRNRRP----DRAAALDLLARFAL-PDSILTKNITELSGGEKQRIALIRNLQFMPKILLLDEITSALDESN 168 (223)
T ss_pred hccccchH-HhccCC----ChHHHHHHHHHcCC-chhhhcchhhhccchHHHHHHHHHHhhcCCceEEecCchhhcChhh
Confidence 99998521 000000 11112245555532 2467788899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHc--CCCeEEEEecCccc-hhccCEEEEEeCcEE
Q 048639 431 EKLVQEALERAM--QGRTVILIAHRMST-IVNADMIAVVEDGQV 471 (1139)
Q Consensus 431 ~~~i~~~l~~~~--~~~tvi~itH~~~~-~~~~d~i~~l~~G~i 471 (1139)
.+.|.+.|.++. ++..++.|||+.+. ++++|+++-+..|++
T Consensus 169 kr~ie~mi~~~v~~q~vAv~WiTHd~dqa~rha~k~itl~~G~~ 212 (223)
T COG4619 169 KRNIEEMIHRYVREQNVAVLWITHDKDQAIRHADKVITLQPGHA 212 (223)
T ss_pred HHHHHHHHHHHhhhhceEEEEEecChHHHhhhhheEEEeccCcc
Confidence 999999998875 47899999999998 677999999999986
No 475
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=5.6e-40 Score=333.53 Aligned_cols=223 Identities=28% Similarity=0.473 Sum_probs=186.1
Q ss_pred cEEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHH-Hhhh
Q 048639 885 RIEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRR-LRSQ 963 (1139)
Q Consensus 885 ~I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~-lR~~ 963 (1139)
-++++||+..|.. .++|+||||++++||.++++||||+||||++++|+|+.+|.+|+|.++|.||..++++. .|..
T Consensus 3 mL~v~~l~~~YG~---~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G~I~~~G~dit~~p~~~r~r~G 79 (237)
T COG0410 3 MLEVENLSAGYGK---IQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPRSGRIIFDGEDITGLPPHERARLG 79 (237)
T ss_pred ceeEEeEeecccc---eeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeeEEECCeecCCCCHHHHHhCC
Confidence 3789999999953 57999999999999999999999999999999999999999999999999999999886 5788
Q ss_pred ceEEcccccccc-ccHHHHhccCCCcCCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhcCC
Q 048639 964 IGLVQQEPLLFS-CSIRNNICYGNEAASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIARTLLKR 1042 (1139)
Q Consensus 964 i~~V~Qdp~LF~-gTIreNL~~~~~~~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalARALlr~ 1042 (1139)
|+||||...+|. -|+.|||.+|.-...+++-++ ..+++..+-+| -|.......+.+|||||+|-+||||||+.+
T Consensus 80 i~~VPegR~iF~~LTVeENL~~g~~~~~~~~~~~----~~~e~v~~lFP-~Lker~~~~aG~LSGGEQQMLAiaRALm~~ 154 (237)
T COG0410 80 IAYVPEGRRIFPRLTVEENLLLGAYARRDKEAQE----RDLEEVYELFP-RLKERRNQRAGTLSGGEQQMLAIARALMSR 154 (237)
T ss_pred eEeCcccccchhhCcHHHHHhhhhhccccccccc----ccHHHHHHHCh-hHHHHhcCcccCCChHHHHHHHHHHHHhcC
Confidence 999999999995 599999998632111111110 00111222233 244455566778999999999999999999
Q ss_pred CCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEEEecChhHHhh
Q 048639 1043 PAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVVEMGSHSTLVA 1121 (1139)
Q Consensus 1043 p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eLl~ 1121 (1139)
||+|+|||||.+|-|.--+.|.++|+++.. ..+.||+.|-++.....+ +||.+||++|+|+..|+.+||.+
T Consensus 155 PklLLLDEPs~GLaP~iv~~I~~~i~~l~~--------~~g~tIlLVEQn~~~Al~iaDr~yvle~Griv~~G~~~eL~~ 226 (237)
T COG0410 155 PKLLLLDEPSEGLAPKIVEEIFEAIKELRK--------EGGMTILLVEQNARFALEIADRGYVLENGRIVLSGTAAELLA 226 (237)
T ss_pred CCEEEecCCccCcCHHHHHHHHHHHHHHHH--------cCCcEEEEEeccHHHHHHhhCEEEEEeCCEEEEecCHHHHhc
Confidence 999999999999999999999999998751 224579999999998876 99999999999999999999997
Q ss_pred cc
Q 048639 1122 ES 1123 (1139)
Q Consensus 1122 ~~ 1123 (1139)
++
T Consensus 227 ~~ 228 (237)
T COG0410 227 DP 228 (237)
T ss_pred CH
Confidence 63
No 476
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.8e-40 Score=361.22 Aligned_cols=220 Identities=31% Similarity=0.515 Sum_probs=180.6
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCC-----ccEEEECCccCCC--CCH
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPS-----NGDILIDSLNIKD--LDL 328 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~-----~G~i~~~g~~~~~--~~~ 328 (1139)
.++++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|+ +|+|.++|.++.. .+.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~ 80 (252)
T PRK14272 4 LLSAQDVNIYYGD---KQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDP 80 (252)
T ss_pred EEEEeeeEEEECC---EEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCH
Confidence 4789999999963 46999999999999999999999999999999999999874 8999999998864 334
Q ss_pred HHHhcceEEEecCCCCCcc-cHHHHHhcCCC--CC-CHHHHHHHHHHhcHHHHHHhC--CCCCCccccccCCCCChHHHH
Q 048639 329 KSLRKNIGAVSQEPSLFTG-SLMDNIKVGNM--DA-DDEQIYNASMMANAHSFISQL--PDQYSTELGQRGVQLSGGQKQ 402 (1139)
Q Consensus 329 ~~~~~~i~~v~Q~~~l~~~-ti~~ni~~g~~--~~-~~~~~~~~~~~~~~~~~i~~l--~~g~~t~i~~~g~~LSgGqkq 402 (1139)
..+++.++|++|++.+|.. |++||+.++.. .. ..++..+.+. +.+..+ ..++.......+.+|||||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~-----~~l~~~~l~~~l~~~~~~~~~~LS~G~~q 155 (252)
T PRK14272 81 VAMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAGIRDRDHLMEVAE-----RSLRGAALWDEVKDRLKTPATGLSGGQQQ 155 (252)
T ss_pred HHhhceeEEEeccCccCcCCCHHHHHHHHHHhcCCCCHHHHHHHHH-----HHHHHcCcchhhhhhhcCCcccCCHHHHH
Confidence 5678889999999999875 99999986532 11 1222222211 112222 111122334567899999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhh
Q 048639 403 RIAIARAIVKNPPILLLDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLL 481 (1139)
Q Consensus 403 Ri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~ 481 (1139)
|++|||||+++|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++.
T Consensus 156 rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 235 (252)
T PRK14272 156 RLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKKVTTIIIVTHNMHQAARVSDTTSFFLVGDLVEHGPTDQLF 235 (252)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999988778999999999999886 9999999999999999999886
Q ss_pred cc
Q 048639 482 QT 483 (1139)
Q Consensus 482 ~~ 483 (1139)
..
T Consensus 236 ~~ 237 (252)
T PRK14272 236 TN 237 (252)
T ss_pred hC
Confidence 53
No 477
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=8.6e-40 Score=362.27 Aligned_cols=230 Identities=24% Similarity=0.401 Sum_probs=184.3
Q ss_pred cEEEEeEEEECCCC------CCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHH
Q 048639 256 NIDIRDVCFAYPSR------PDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLK 329 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~------~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~ 329 (1139)
.|+++|++++|+.. .++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+..
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~ 83 (267)
T PRK15112 4 LLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHFGDYS 83 (267)
T ss_pred eEEEeceEEEecCCCCcccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCchh
Confidence 58999999999631 124699999999999999999999999999999999999999999999999998755555
Q ss_pred HHhcceEEEecCCC--CCcc-cHHHHHhcCCC---CCCHHHHHHHHHHhcHHHHHHhCCCCCC-ccccccCCCCChHHHH
Q 048639 330 SLRKNIGAVSQEPS--LFTG-SLMDNIKVGNM---DADDEQIYNASMMANAHSFISQLPDQYS-TELGQRGVQLSGGQKQ 402 (1139)
Q Consensus 330 ~~~~~i~~v~Q~~~--l~~~-ti~~ni~~g~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~i~~~g~~LSgGqkq 402 (1139)
..++.++|++|++. +++. |+.+|+.++.. .....+..+ .+.+.++.+ |++ ........+|||||||
T Consensus 84 ~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~~LS~G~~q 156 (267)
T PRK15112 84 YRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNTDLEPEQREK-----QIIETLRQV--GLLPDHASYYPHMLAPGQKQ 156 (267)
T ss_pred hHhccEEEEecCchhhcCcchhHHHHHHHHHHhccCCCHHHHHH-----HHHHHHHHc--CCChHHHhcCchhcCHHHHH
Confidence 56678999999985 4443 89999875311 111111111 122334444 332 2234456799999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhh
Q 048639 403 RIAIARAIVKNPPILLLDEATSALDSESEKLVQEALERAM--QGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHS 479 (1139)
Q Consensus 403 Ri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~ 479 (1139)
|++|||||+.+|++|||||||++||+.+.+.+.+.|.++. .++|+|++||+++.+.. ||++++|++|++++.|++++
T Consensus 157 rv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 236 (267)
T PRK15112 157 RLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLGMMKHISDQVLVMHQGEVVERGSTAD 236 (267)
T ss_pred HHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCHHH
Confidence 9999999999999999999999999999999999998874 37899999999999986 99999999999999999999
Q ss_pred hhccc--hHHHHHHh
Q 048639 480 LLQTS--DFYNRLFT 492 (1139)
Q Consensus 480 l~~~~--~~~~~~~~ 492 (1139)
+.... ..+..++.
T Consensus 237 ~~~~~~~~~~~~~~~ 251 (267)
T PRK15112 237 VLASPLHELTKRLIA 251 (267)
T ss_pred HhcCCCCHHHHHHHH
Confidence 87642 44555553
No 478
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=6.8e-40 Score=356.96 Aligned_cols=214 Identities=30% Similarity=0.485 Sum_probs=181.2
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcceE
Q 048639 257 IDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNIG 336 (1139)
Q Consensus 257 i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 336 (1139)
|+++|++++|++ +++|+|+||++.+||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. .++.++
T Consensus 1 i~i~~l~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~i~g~~~~~~~~--~~~~i~ 75 (237)
T TIGR00968 1 IEIANISKRFGS---FQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPDSGRIRLNGQDATRVHA--RDRKIG 75 (237)
T ss_pred CEEEEEEEEECC---eeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcCEE
Confidence 478999999973 369999999999999999999999999999999999999999999999999876543 467899
Q ss_pred EEecCCCCCcc-cHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHccC
Q 048639 337 AVSQEPSLFTG-SLMDNIKVGNMD--ADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVKN 413 (1139)
Q Consensus 337 ~v~Q~~~l~~~-ti~~ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~~ 413 (1139)
|+||+|.+|++ |++||+.++... .+.... ...+.+.++.+ ++.........+||||||||++|||||+++
T Consensus 76 ~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~lS~G~~qrl~laral~~~ 148 (237)
T TIGR00968 76 FVFQHYALFKHLTVRDNIAFGLEIRKHPKAKI-----KARVEELLELV--QLEGLGDRYPNQLSGGQRQRVALARALAVE 148 (237)
T ss_pred EEecChhhccCCcHHHHHHhHHHhcCCCHHHH-----HHHHHHHHHHc--CCHhHhhCChhhCCHHHHHHHHHHHHHhcC
Confidence 99999999975 999999876421 111111 11223455655 333345566789999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhc
Q 048639 414 PPILLLDEATSALDSESEKLVQEALERAMQ--GRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQ 482 (1139)
Q Consensus 414 ~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 482 (1139)
|+++||||||++||+++++.+.+.|++..+ ++|+|++||+++.+.. ||++++|++|++++.|+++++.+
T Consensus 149 p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~ 220 (237)
T TIGR00968 149 PQVLLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQEEAMEVADRIVVMSNGKIEQIGSPDEVYD 220 (237)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEECCEEEEecCHHHHHc
Confidence 999999999999999999999999988654 7999999999999876 99999999999999999998864
No 479
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-39 Score=360.74 Aligned_cols=218 Identities=33% Similarity=0.514 Sum_probs=181.3
Q ss_pred ccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCC-----CccEEEECCccCCC--CC
Q 048639 255 GNIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDP-----SNGDILIDSLNIKD--LD 327 (1139)
Q Consensus 255 ~~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~-----~~G~i~~~g~~~~~--~~ 327 (1139)
..|+++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++| ++|+|.++|+++.. .+
T Consensus 19 ~~l~~~nl~~~~~~---~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~l~~~~~~ 95 (274)
T PRK14265 19 SVFEVEGVKVFYGG---FLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRDRNIYDSQIN 95 (274)
T ss_pred ceEEEeeEEEEeCC---eEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECCEecccccch
Confidence 36999999999963 3699999999999999999999999999999999999863 69999999998854 33
Q ss_pred HHHHhcceEEEecCCCCCcccHHHHHhcCCCCCC-----HHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHH
Q 048639 328 LKSLRKNIGAVSQEPSLFTGSLMDNIKVGNMDAD-----DEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQ 402 (1139)
Q Consensus 328 ~~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~-----~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkq 402 (1139)
...++++|+|++|++.+|+.|++||+.++..... ++.+.++++..++.+ ++.......+.+|||||||
T Consensus 96 ~~~~~~~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~l~~~~~~~~~~LSgGq~q 168 (274)
T PRK14265 96 SVKLRRQVGMVFQRPNPFPKSIYENIAFAPRANGYKGNLDELVEDSLRRAAIWE-------EVKDKLKEKGTALSGGQQQ 168 (274)
T ss_pred hHHHhhcEEEEccCCccccccHHHHHHhHHHhcCchHHHHHHHHHHHHHcccch-------hhHHHhcCCcccCCHHHHH
Confidence 4466789999999999998899999987632110 112222222222211 1122345677899999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhc-cCEEEEEe---------CcEEE
Q 048639 403 RIAIARAIVKNPPILLLDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVN-ADMIAVVE---------DGQVT 472 (1139)
Q Consensus 403 Ri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~---------~G~i~ 472 (1139)
|++|||||+.+|++|||||||++||+.+...+.+.|.++.+++|+|++||+++.+.. ||++++|+ +|+++
T Consensus 169 rv~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~~~~~~~~G~~~ 248 (274)
T PRK14265 169 RLCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKEQYTIIMVTHNMQQASRVADWTAFFNTEIDEYGKRRGKLV 248 (274)
T ss_pred HHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEecccccccccCceEE
Confidence 999999999999999999999999999999999999988778999999999999975 99999997 89999
Q ss_pred EecChhhhhc
Q 048639 473 ETGTHHSLLQ 482 (1139)
Q Consensus 473 ~~g~~~~l~~ 482 (1139)
+.|+++++..
T Consensus 249 ~~g~~~~~~~ 258 (274)
T PRK14265 249 EFSPTEQMFG 258 (274)
T ss_pred EeCCHHHHHh
Confidence 9999999864
No 480
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=1e-39 Score=360.58 Aligned_cols=218 Identities=24% Similarity=0.396 Sum_probs=181.7
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCcc-----CCCCCHHH
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLN-----IKDLDLKS 330 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~-----~~~~~~~~ 330 (1139)
.++++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+ +...+...
T Consensus 6 ~l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~i~~~~~~~ 82 (258)
T PRK11701 6 LLSVRGLTKLYGP---RKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPDAGEVHYRMRDGQLRDLYALSEAE 82 (258)
T ss_pred eEEEeeeEEEcCC---ceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCccccccccccCCHHH
Confidence 4899999999963 469999999999999999999999999999999999999999999999998 76665543
Q ss_pred ----HhcceEEEecCCC--CCc-ccHHHHHhcCC---CCCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHH
Q 048639 331 ----LRKNIGAVSQEPS--LFT-GSLMDNIKVGN---MDADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQ 400 (1139)
Q Consensus 331 ----~~~~i~~v~Q~~~--l~~-~ti~~ni~~g~---~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGq 400 (1139)
+++.++|++|++. ++. .|+.+|+.+.. ......+.. ..+.+.++.++.+ .+..+..+.+|||||
T Consensus 83 ~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-----~~~~~~l~~~~l~-~~~~~~~~~~LS~Gq 156 (258)
T PRK11701 83 RRRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVGARHYGDIR-----ATAGDWLERVEID-AARIDDLPTTFSGGM 156 (258)
T ss_pred HHHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhccCcHHHHH-----HHHHHHHHHcCCC-hhHHhCCCccCCHHH
Confidence 3567999999984 343 48899986421 011112221 1234567776432 245678899999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CCeEEEEecCccchhc-cCEEEEEeCcEEEEecCh
Q 048639 401 KQRIAIARAIVKNPPILLLDEATSALDSESEKLVQEALERAMQ--GRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTH 477 (1139)
Q Consensus 401 kqRi~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~ 477 (1139)
|||++|||||+.+|++|||||||++||+.+.+.+.+.++++.+ +.|+|++||+++.+.. ||+|++|++|++++.|++
T Consensus 157 ~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~~~~~~~d~i~~l~~g~i~~~~~~ 236 (258)
T PRK11701 157 QQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLAVARLLAHRLLVMKQGRVVESGLT 236 (258)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999999999988643 7899999999999975 999999999999999999
Q ss_pred hhhhc
Q 048639 478 HSLLQ 482 (1139)
Q Consensus 478 ~~l~~ 482 (1139)
+++..
T Consensus 237 ~~~~~ 241 (258)
T PRK11701 237 DQVLD 241 (258)
T ss_pred HHHhc
Confidence 98864
No 481
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.6e-40 Score=365.10 Aligned_cols=221 Identities=29% Similarity=0.483 Sum_probs=181.1
Q ss_pred ccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccC-----CCccEEEECCccCCCC--C
Q 048639 255 GNIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYD-----PSNGDILIDSLNIKDL--D 327 (1139)
Q Consensus 255 ~~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~-----~~~G~i~~~g~~~~~~--~ 327 (1139)
..|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+.+ |++|+|.++|.++... +
T Consensus 38 ~~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g~~i~~~~~~ 114 (286)
T PRK14275 38 PHVVAKNFSIYYGE---FEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDGEDIYGKFTD 114 (286)
T ss_pred eEEEEeeeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECCEEhhhcccc
Confidence 35899999999963 359999999999999999999999999999999999864 4999999999988543 2
Q ss_pred HHHHhcceEEEecCCCCCcccHHHHHhcCCC--CC-CHHHHHHHHHHhcHHHHHHhCC--CCCCccccccCCCCChHHHH
Q 048639 328 LKSLRKNIGAVSQEPSLFTGSLMDNIKVGNM--DA-DDEQIYNASMMANAHSFISQLP--DQYSTELGQRGVQLSGGQKQ 402 (1139)
Q Consensus 328 ~~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~--~~-~~~~~~~~~~~~~~~~~i~~l~--~g~~t~i~~~g~~LSgGqkq 402 (1139)
...+|++++|++|++.+|+.|++||+.++.. .. ......+. +.+.++.+. +++.......+..|||||||
T Consensus 115 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~~~l~~~~~~~~~~LSgGq~q 189 (286)
T PRK14275 115 EVLLRKKIGMVFQKPNPFPKSIFDNIAYGPRLHGINDKKQLEEI-----VEKSLRKAALWDEVSDRLDKNALGLSGGQQQ 189 (286)
T ss_pred hHHhhhcEEEECCCCCCCccCHHHHHHhHHHhcCCCcHHHHHHH-----HHHHHHHhCCccchhhHhhCChhhCCHHHHH
Confidence 3456889999999999998899999987632 11 11111111 112222221 11122345678899999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhh
Q 048639 403 RIAIARAIVKNPPILLLDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLL 481 (1139)
Q Consensus 403 Ri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~ 481 (1139)
|++|||||+.+|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++.
T Consensus 190 rv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tvIivsH~~~~~~~~~d~i~~L~~G~i~~~g~~~~~~ 269 (286)
T PRK14275 190 RLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRGSYTIMIVTHNMQQASRVSDYTMFFYEGVLVEHAPTAQLF 269 (286)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999988777899999999999875 9999999999999999999886
Q ss_pred cc
Q 048639 482 QT 483 (1139)
Q Consensus 482 ~~ 483 (1139)
..
T Consensus 270 ~~ 271 (286)
T PRK14275 270 TN 271 (286)
T ss_pred hC
Confidence 53
No 482
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.8e-40 Score=371.53 Aligned_cols=227 Identities=23% Similarity=0.343 Sum_probs=183.4
Q ss_pred cEEEEeEEEECCCCC-CCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccC----CCccEEEECCccCCCCCHHH
Q 048639 256 NIDIRDVCFAYPSRP-DQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYD----PSNGDILIDSLNIKDLDLKS 330 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~-~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~----~~~G~i~~~g~~~~~~~~~~ 330 (1139)
.|+++|++++|+... ...+|+||||+|++||+++|+|+||||||||+++|+|+.+ |++|+|.++|+++...+.+.
T Consensus 3 ~L~v~~l~~~y~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~ 82 (330)
T PRK15093 3 LLDIRNLTIEFKTSDGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRE 82 (330)
T ss_pred eEEEeeeEEEEeCCCCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHH
Confidence 489999999996421 2469999999999999999999999999999999999986 58999999999998877655
Q ss_pred Hh----cceEEEecCCC--CCc-ccHHHHHhcCCC---C-----CCHHHHHHHHHHhcHHHHHHhCCCCCC---cccccc
Q 048639 331 LR----KNIGAVSQEPS--LFT-GSLMDNIKVGNM---D-----ADDEQIYNASMMANAHSFISQLPDQYS---TELGQR 392 (1139)
Q Consensus 331 ~~----~~i~~v~Q~~~--l~~-~ti~~ni~~g~~---~-----~~~~~~~~~~~~~~~~~~i~~l~~g~~---t~i~~~ 392 (1139)
++ +.|+||+|+|. +.+ .||.+|+..... . ....+. ...+.+.++.+ |++ ......
T Consensus 83 ~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~-----~~~~~~~L~~~--gL~~~~~~~~~~ 155 (330)
T PRK15093 83 RRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWR-----KRRAIELLHRV--GIKDHKDAMRSF 155 (330)
T ss_pred HHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHH-----HHHHHHHHHHC--CCCChHHHHhCC
Confidence 43 47999999996 333 489999864210 0 000111 12233455555 333 234677
Q ss_pred CCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CCeEEEEecCccchhc-cCEEEEEeCc
Q 048639 393 GVQLSGGQKQRIAIARAIVKNPPILLLDEATSALDSESEKLVQEALERAMQ--GRTVILIAHRMSTIVN-ADMIAVVEDG 469 (1139)
Q Consensus 393 g~~LSgGqkqRi~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~itH~~~~~~~-~d~i~~l~~G 469 (1139)
+.+||||||||++|||||+.+|++|||||||++||+.++..+.+.|+++.+ |.|+|+|||+++.+.. ||+|++|++|
T Consensus 156 p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~~v~~~~dri~vm~~G 235 (330)
T PRK15093 156 PYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQMLSQWADKINVLYCG 235 (330)
T ss_pred chhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECC
Confidence 889999999999999999999999999999999999999999999998753 7999999999999976 9999999999
Q ss_pred EEEEecChhhhhccc-hHHHH
Q 048639 470 QVTETGTHHSLLQTS-DFYNR 489 (1139)
Q Consensus 470 ~i~~~g~~~~l~~~~-~~~~~ 489 (1139)
+|++.|+.+++.... ..|.+
T Consensus 236 ~ive~g~~~~i~~~p~~~y~~ 256 (330)
T PRK15093 236 QTVETAPSKELVTTPHHPYTQ 256 (330)
T ss_pred EEEEECCHHHHHhCCCCHHHH
Confidence 999999999987642 34443
No 483
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=6.3e-40 Score=354.95 Aligned_cols=214 Identities=25% Similarity=0.383 Sum_probs=172.2
Q ss_pred EEEEeEEEECCCCC-CCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccC---CCccEEEECCccCCCCCHHHHh
Q 048639 257 IDIRDVCFAYPSRP-DQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYD---PSNGDILIDSLNIKDLDLKSLR 332 (1139)
Q Consensus 257 i~~~~v~~~y~~~~-~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~---~~~G~i~~~g~~~~~~~~~~~~ 332 (1139)
+.++||+++|++.. .+++|+|+||++++||+++|+||||||||||+++|+|+++ |++|+|.++|.++. ...++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~~---~~~~~ 80 (226)
T cd03234 4 LPWWDVGLKAKNWNKYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPRK---PDQFQ 80 (226)
T ss_pred ceeecceeeeecCccccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEECC---hHHhc
Confidence 57999999997532 3679999999999999999999999999999999999999 99999999998874 34567
Q ss_pred cceEEEecCCCCCcc-cHHHHHhcCCCCCCHHHHHHHHHHhcHHH-HHHhCCCCCCccccccCCCCChHHHHHHHHHHHH
Q 048639 333 KNIGAVSQEPSLFTG-SLMDNIKVGNMDADDEQIYNASMMANAHS-FISQLPDQYSTELGQRGVQLSGGQKQRIAIARAI 410 (1139)
Q Consensus 333 ~~i~~v~Q~~~l~~~-ti~~ni~~g~~~~~~~~~~~~~~~~~~~~-~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal 410 (1139)
+.++|++|++.+|+. |++||+.++...................+ .++.+ ++.........+||||||||++|||||
T Consensus 81 ~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~laral 158 (226)
T cd03234 81 KCVAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDAIRKKRVEDVLLRDL--ALTRIGGNLVKGISGGERRRVSIAVQL 158 (226)
T ss_pred ccEEEeCCCCccCcCCcHHHHHHHHHHhhcccccchHHHHHHHHHHHHHhh--cchhhhcccccCcCHHHHHHHHHHHHH
Confidence 899999999999987 99999987522110000000111111112 33333 333344567789999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCCeEEEEecCc-cchh-ccCEEEEEeCcEEEEec
Q 048639 411 VKNPPILLLDEATSALDSESEKLVQEALERAM-QGRTVILIAHRM-STIV-NADMIAVVEDGQVTETG 475 (1139)
Q Consensus 411 ~~~~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~~-~~~~-~~d~i~~l~~G~i~~~g 475 (1139)
+++|+++||||||++||+.+...+.+.++++. +++|+|++||++ +.+. .||++++|++|++++.|
T Consensus 159 ~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~G~i~~~g 226 (226)
T cd03234 159 LWDPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSSGEIVYSG 226 (226)
T ss_pred HhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeCCEEEecC
Confidence 99999999999999999999999999998864 478999999998 4665 59999999999998765
No 484
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=3.8e-40 Score=314.35 Aligned_cols=214 Identities=29% Similarity=0.443 Sum_probs=180.9
Q ss_pred cEEEEeEEEECCCCC-CCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHH---H
Q 048639 256 NIDIRDVCFAYPSRP-DQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKS---L 331 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~-~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~---~ 331 (1139)
-|+++++++.-+... ...+|++|+|.|++||.++||||||||||||+-+++|+-+|++|+|.+.|+++..++.+. +
T Consensus 6 ii~~~~l~ktvg~~~~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~~ssGeV~l~G~~L~~ldEd~rA~~ 85 (228)
T COG4181 6 IIEVHHLSKTVGQGEGELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDDPSSGEVRLLGQPLHKLDEDARAAL 85 (228)
T ss_pred eeehhhhhhhhcCCCcceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCCCCCceEEEcCcchhhcCHHHHHHh
Confidence 478888888876432 346999999999999999999999999999999999999999999999999999887654 3
Q ss_pred h-cceEEEecCCCCCc-ccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHH
Q 048639 332 R-KNIGAVSQEPSLFT-GSLMDNIKVGNMDADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARA 409 (1139)
Q Consensus 332 ~-~~i~~v~Q~~~l~~-~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARa 409 (1139)
| +++|+|+|..+|.+ .|..||+.....-..+. .+-....+.+.++.+ |+...+...+.+||||++||||||||
T Consensus 86 R~~~vGfVFQSF~Lip~ltAlENV~lPleL~ge~---~~~~~~~A~~lL~~v--GLg~Rl~HyP~qLSGGEQQRVAiARA 160 (228)
T COG4181 86 RARHVGFVFQSFHLIPNLTALENVALPLELRGES---SADSRAGAKALLEAV--GLGKRLTHYPAQLSGGEQQRVALARA 160 (228)
T ss_pred hccceeEEEEeeeccccchhhhhccchhhhcCCc---cccHHHHHHHHHHHh--CcccccccCccccCchHHHHHHHHHH
Confidence 4 68999999999875 59999998753211100 011122234556666 77788889999999999999999999
Q ss_pred HccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCCeEEEEecCccchhccCEEEEEeCcEEEEe
Q 048639 410 IVKNPPILLLDEATSALDSESEKLVQEALERAM--QGRTVILIAHRMSTIVNADMIAVVEDGQVTET 474 (1139)
Q Consensus 410 l~~~~~illlDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~ 474 (1139)
+...|+||+-||||-+||..|...|.+.+..+. .|.|.|+||||+....+|||++-|.+|+++++
T Consensus 161 fa~~P~vLfADEPTGNLD~~Tg~~iaDLlF~lnre~G~TlVlVTHD~~LA~Rc~R~~r~~~G~l~~~ 227 (228)
T COG4181 161 FAGRPDVLFADEPTGNLDRATGDKIADLLFALNRERGTTLVLVTHDPQLAARCDRQLRLRSGRLVED 227 (228)
T ss_pred hcCCCCEEeccCCCCCcchhHHHHHHHHHHHHhhhcCceEEEEeCCHHHHHhhhheeeeecceeccC
Confidence 999999999999999999999999999998764 48899999999999999999999999999753
No 485
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-39 Score=358.86 Aligned_cols=217 Identities=31% Similarity=0.557 Sum_probs=181.3
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccC-----CCccEEEECCccCCCC--CH
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYD-----PSNGDILIDSLNIKDL--DL 328 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~-----~~~G~i~~~g~~~~~~--~~ 328 (1139)
.++++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+.+ |++|+|.+||+++... +.
T Consensus 3 ~l~~~~v~~~~~~---~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~ 79 (250)
T PRK14266 3 RIEVENLNTYFDD---AHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDGVDIYDPAVDV 79 (250)
T ss_pred EEEEEeEEEEeCC---eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECCEEcccccccH
Confidence 3789999999963 469999999999999999999999999999999999864 4899999999988653 45
Q ss_pred HHHhcceEEEecCCCCCcccHHHHHhcCCC--CC-CHH----HHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHH
Q 048639 329 KSLRKNIGAVSQEPSLFTGSLMDNIKVGNM--DA-DDE----QIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQK 401 (1139)
Q Consensus 329 ~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~--~~-~~~----~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqk 401 (1139)
..++++++|+||++.+|+.|++||+.++.. .. ..+ ++.++++..++.+++. ...+..+.+||||||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~Gq~ 152 (250)
T PRK14266 80 VELRKKVGMVFQKPNPFPKSIFDNVAYGLRIHGEDDEDFIEERVEESLKAAALWDEVK-------DKLDKSALGLSGGQQ 152 (250)
T ss_pred HHHhhheEEEecCCccCcchHHHHHHhHHhhcCCCCHHHHHHHHHHHHHHcCCchhHH-------HHHhCCcccCCHHHH
Confidence 567889999999999999999999987531 11 112 1222333333222221 224567789999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhh
Q 048639 402 QRIAIARAIVKNPPILLLDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSL 480 (1139)
Q Consensus 402 qRi~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l 480 (1139)
||++|||||+++|+++||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 153 qrv~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~~~~i~~l~~G~i~~~g~~~~~ 232 (250)
T PRK14266 153 QRLCIARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKEDYTIVIVTHNMQQATRVSKYTSFFLNGEIIESGLTDQI 232 (250)
T ss_pred HHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEECCHHHHHhhcCEEEEEECCeEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988778999999999999876 999999999999999999988
Q ss_pred hc
Q 048639 481 LQ 482 (1139)
Q Consensus 481 ~~ 482 (1139)
..
T Consensus 233 ~~ 234 (250)
T PRK14266 233 FI 234 (250)
T ss_pred Hh
Confidence 54
No 486
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-39 Score=358.54 Aligned_cols=207 Identities=30% Similarity=0.488 Sum_probs=174.1
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcceE
Q 048639 257 IDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNIG 336 (1139)
Q Consensus 257 i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 336 (1139)
++++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++... +..++
T Consensus 2 l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-----~~~~~ 73 (255)
T PRK11248 2 LQISHLYADYGG---KPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSITLDGKPVEGP-----GAERG 73 (255)
T ss_pred EEEEEEEEEeCC---eeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCC-----CCcEE
Confidence 789999999963 4699999999999999999999999999999999999999999999999987642 24689
Q ss_pred EEecCCCCCc-ccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHccC
Q 048639 337 AVSQEPSLFT-GSLMDNIKVGNM--DADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVKN 413 (1139)
Q Consensus 337 ~v~Q~~~l~~-~ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~~ 413 (1139)
|++|++.+++ .|++||+.++.. .....+. ...+.+.++.+ |+.......+.+||||||||++|||||+.+
T Consensus 74 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~-----~~~~~~~l~~~--gl~~~~~~~~~~LSgGq~qrl~laral~~~ 146 (255)
T PRK11248 74 VVFQNEGLLPWRNVQDNVAFGLQLAGVEKMQR-----LEIAHQMLKKV--GLEGAEKRYIWQLSGGQRQRVGIARALAAN 146 (255)
T ss_pred EEeCCCccCCCCcHHHHHHhHHHHcCCCHHHH-----HHHHHHHHHHc--CChhHhhCChhhCCHHHHHHHHHHHHHhcC
Confidence 9999999887 599999987531 1111111 11233455555 454455677889999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCCeEEEEecCccchhc-cCEEEEEe--CcEEEEecChh
Q 048639 414 PPILLLDEATSALDSESEKLVQEALERAM--QGRTVILIAHRMSTIVN-ADMIAVVE--DGQVTETGTHH 478 (1139)
Q Consensus 414 ~~illlDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~~~~~~~-~d~i~~l~--~G~i~~~g~~~ 478 (1139)
|++|||||||++||+.+...+.+.|+++. .++|+|++||+++.+.. ||+|++|+ +|++++.++.+
T Consensus 147 p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~~~G~i~~~~~~~ 216 (255)
T PRK11248 147 PQLLLLDEPFGALDAFTREQMQTLLLKLWQETGKQVLLITHDIEEAVFMATELVLLSPGPGRVVERLPLN 216 (255)
T ss_pred CCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCcEEEEEecCC
Confidence 99999999999999999999999998863 38999999999999876 99999998 59999887653
No 487
>COG4598 HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.3e-40 Score=319.57 Aligned_cols=218 Identities=29% Similarity=0.519 Sum_probs=185.7
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCC---------
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDL--------- 326 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~--------- 326 (1139)
.++++|+.++|+.. .+|++||++.++|+.+.|+|.|||||||++++|.=+..|+.|+|.++|.+++-.
T Consensus 6 ~l~v~dlHK~~G~~---eVLKGvSL~A~~GdVisIIGsSGSGKSTfLRCiN~LE~P~~G~I~v~geei~~k~~~~G~l~~ 82 (256)
T COG4598 6 ALEVEDLHKRYGEH---EVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSAGSIRVNGEEIRLKRDKDGQLKP 82 (256)
T ss_pred ceehhHHHhhcccc---hhhcceeeecCCCCEEEEecCCCCchhHHHHHHHhhcCCCCceEEECCeEEEeeeCCCCCeee
Confidence 58999999999743 499999999999999999999999999999999999999999999999877421
Q ss_pred -C---HHHHhcceEEEecCCCCCc-ccHHHHHhcCCCC---CCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCCh
Q 048639 327 -D---LKSLRKNIGAVSQEPSLFT-GSLMDNIKVGNMD---ADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSG 398 (1139)
Q Consensus 327 -~---~~~~~~~i~~v~Q~~~l~~-~ti~~ni~~g~~~---~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSg 398 (1139)
+ .+.+|.+.++|+|+..|++ .|+.||+.-+.-. .+..+ ....+..++.+. |+.......+..|||
T Consensus 83 ad~~q~~r~Rs~L~mVFQ~FNLWsHmtvLeNViEaPvhVLg~~k~e-----a~e~Ae~~L~kV--Gi~ek~~~YP~~LSG 155 (256)
T COG4598 83 ADKRQLQRLRTRLGMVFQHFNLWSHMTVLENVIEAPVHVLGVSKAE-----AIERAEKYLAKV--GIAEKADAYPAHLSG 155 (256)
T ss_pred CCHHHHHHHHHHhhHhhhhcchhHHHHHHHHHHhcchHhhcCCHHH-----HHHHHHHHHHHh--CchhhhhcCccccCc
Confidence 1 3457889999999999996 4999999744211 12221 112233456655 666667788899999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCCeEEEEecCccchhc-cCEEEEEeCcEEEEecC
Q 048639 399 GQKQRIAIARAIVKNPPILLLDEATSALDSESEKLVQEALERAM-QGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGT 476 (1139)
Q Consensus 399 GqkqRi~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~ 476 (1139)
||+||+||||||..+|+++++|||||||||+---.+.+.+.++. +|+|.++|||.+.+.++ +.+++.|.+|.|-|+|+
T Consensus 156 GQQQR~aIARaLameP~vmLFDEPTSALDPElVgEVLkv~~~LAeEgrTMv~VTHEM~FAR~Vss~v~fLh~G~iEE~G~ 235 (256)
T COG4598 156 GQQQRVAIARALAMEPEVMLFDEPTSALDPELVGEVLKVMQDLAEEGRTMVVVTHEMGFARDVSSHVIFLHQGKIEEEGP 235 (256)
T ss_pred hHHHHHHHHHHHhcCCceEeecCCcccCCHHHHHHHHHHHHHHHHhCCeEEEEeeehhHHHhhhhheEEeecceecccCC
Confidence 99999999999999999999999999999999888999998876 59999999999999998 89999999999999999
Q ss_pred hhhhhcc
Q 048639 477 HHSLLQT 483 (1139)
Q Consensus 477 ~~~l~~~ 483 (1139)
|+++..+
T Consensus 236 P~qvf~n 242 (256)
T COG4598 236 PEQVFGN 242 (256)
T ss_pred hHHHhcC
Confidence 9999764
No 488
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=8.5e-40 Score=375.31 Aligned_cols=215 Identities=30% Similarity=0.470 Sum_probs=182.2
Q ss_pred eEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCC----hHHHhhhce
Q 048639 890 NIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYN----LRRLRSQIG 965 (1139)
Q Consensus 890 nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~----l~~lR~~i~ 965 (1139)
|++++|++ .. + |+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||.++...+ ....|++++
T Consensus 4 ~l~~~~~~---~~-~-~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~~i~ 78 (354)
T TIGR02142 4 RFSKRLGD---FS-L-DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPDEGEIVLNGRTLFDSRKGIFLPPEKRRIG 78 (354)
T ss_pred EEEEEECC---EE-E-EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccCccccccchhhCCeE
Confidence 89999953 23 4 899999999999999999999999999999999999999999999986532 345688999
Q ss_pred EEccccccccc-cHHHHhccCCCcCC----HHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhc
Q 048639 966 LVQQEPLLFSC-SIRNNICYGNEAAS----EAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIARTLL 1040 (1139)
Q Consensus 966 ~V~Qdp~LF~g-TIreNL~~~~~~~s----d~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalARALl 1040 (1139)
||||++.+|.. |+++|+.++..... ++++.++++..++.++.++. ...||||||||++|||||+
T Consensus 79 ~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~-----------~~~LSgGqkqRvalAraL~ 147 (354)
T TIGR02142 79 YVFQEARLFPHLSVRGNLRYGMKRARPSERRISFERVIELLGIGHLLGRL-----------PGRLSGGEKQRVAIGRALL 147 (354)
T ss_pred EEecCCccCCCCcHHHHHHHHhhccChhHHHHHHHHHHHHcCChhHhcCC-----------hhhCCHHHHHHHHHHHHHH
Confidence 99999999975 99999987532211 23477778888776655443 3579999999999999999
Q ss_pred CCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEEEecChhHH
Q 048639 1041 KRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVVEMGSHSTL 1119 (1139)
Q Consensus 1041 r~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~eL 1119 (1139)
++|++|||||||++||+.+.+.+.+.|++... ..++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 148 ~~p~lllLDEPts~LD~~~~~~l~~~L~~l~~--------~~g~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 219 (354)
T TIGR02142 148 SSPRLLLMDEPLAALDDPRKYEILPYLERLHA--------EFGIPILYVSHSLQEVLRLADRVVVLEDGRVAAAGPIAEV 219 (354)
T ss_pred cCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHH--------hcCCEEEEEecCHHHHHHhCCEEEEEeCCEEEEECCHHHH
Confidence 99999999999999999999999999997641 224569999999999876 999999999999999999999
Q ss_pred hhccCChHH
Q 048639 1120 VAESQGVYS 1128 (1139)
Q Consensus 1120 l~~~~g~f~ 1128 (1139)
..+++..|.
T Consensus 220 ~~~~~~~~~ 228 (354)
T TIGR02142 220 WASPDLPWL 228 (354)
T ss_pred hcCcCcccc
Confidence 977655543
No 489
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.8e-40 Score=360.68 Aligned_cols=219 Identities=30% Similarity=0.499 Sum_probs=180.4
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCC-----CccEEEECCccCCC--CCH
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDP-----SNGDILIDSLNIKD--LDL 328 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~-----~~G~i~~~g~~~~~--~~~ 328 (1139)
.++++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++| ++|+|.++|+++.. .+.
T Consensus 4 ~l~i~~v~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~ 80 (258)
T PRK14241 4 RIDVKDLNIYYGS---FHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDP 80 (258)
T ss_pred cEEEeeEEEEECC---EeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccCh
Confidence 4899999999963 3599999999999999999999999999999999999974 79999999998853 345
Q ss_pred HHHhcceEEEecCCCCCc-ccHHHHHhcCCCC---CCHHHHHHHHHHhcHHHHHHhCC--CCCCccccccCCCCChHHHH
Q 048639 329 KSLRKNIGAVSQEPSLFT-GSLMDNIKVGNMD---ADDEQIYNASMMANAHSFISQLP--DQYSTELGQRGVQLSGGQKQ 402 (1139)
Q Consensus 329 ~~~~~~i~~v~Q~~~l~~-~ti~~ni~~g~~~---~~~~~~~~~~~~~~~~~~i~~l~--~g~~t~i~~~g~~LSgGqkq 402 (1139)
..+++.++|++|++.+|+ .|++||+.++... ...++..+ .+.+.++.+. ..........+.+|||||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~q 155 (258)
T PRK14241 81 VAVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNGVRNKKDLDE-----LVEKSLRGANLWNEVKDRLDKPGGGLSGGQQQ 155 (258)
T ss_pred HHHhcceEEEccccccCCCCcHHHHHHHHHHhcCCCCHHHHHH-----HHHHHHHHcCCchhhhhHhhCCcccCCHHHHH
Confidence 567889999999999987 5999999875311 11111111 1122333331 11123456677899999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhc-cCEEEEEe------CcEEEEec
Q 048639 403 RIAIARAIVKNPPILLLDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVN-ADMIAVVE------DGQVTETG 475 (1139)
Q Consensus 403 Ri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~------~G~i~~~g 475 (1139)
|++|||||+.+|+++||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|+ +|++++.|
T Consensus 156 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tviivsH~~~~~~~~~d~i~~l~~~~~~~~g~i~~~~ 235 (258)
T PRK14241 156 RLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQDYTIVIVTHNMQQAARVSDQTAFFNLEATGKPGRLVEID 235 (258)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccCCCCceEEecC
Confidence 999999999999999999999999999999999999988667999999999999865 99999997 89999999
Q ss_pred Chhhhhc
Q 048639 476 THHSLLQ 482 (1139)
Q Consensus 476 ~~~~l~~ 482 (1139)
+++++..
T Consensus 236 ~~~~~~~ 242 (258)
T PRK14241 236 DTEKIFS 242 (258)
T ss_pred CHHHHHh
Confidence 9998864
No 490
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.7e-40 Score=323.77 Aligned_cols=214 Identities=32% Similarity=0.514 Sum_probs=186.1
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhce
Q 048639 886 IEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQIG 965 (1139)
Q Consensus 886 I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~ 965 (1139)
+++.+++.+|++ ...+++||||+++.||.+||.|+|||||||++++|..|+.|++|.|+|||+|+.. ++...|++||
T Consensus 2 l~v~~l~K~y~~--~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~~G~v~idg~d~~~-~p~~vrr~IG 78 (245)
T COG4555 2 LEVTDLTKSYGS--KVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPDSGKVTIDGVDTVR-DPSFVRRKIG 78 (245)
T ss_pred eeeeehhhhccC--HHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCCCceEEEeeccccc-ChHHHhhhcc
Confidence 678999999974 3458999999999999999999999999999999999999999999999999987 5678899999
Q ss_pred EEccccccc-cccHHHHhccCCC--c----CCHHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 048639 966 LVQQEPLLF-SCSIRNNICYGNE--A----ASEAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIART 1038 (1139)
Q Consensus 966 ~V~Qdp~LF-~gTIreNL~~~~~--~----~sd~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalARA 1038 (1139)
+++-+.-|+ .-|.||||.|+.. + ..+.++.+..+.-++.+++ |.+++ +||-|+|||++||||
T Consensus 79 Vl~~e~glY~RlT~rEnl~~Fa~L~~l~~~~~kari~~l~k~l~l~~~~-------~rRv~----~~S~G~kqkV~iARA 147 (245)
T COG4555 79 VLFGERGLYARLTARENLKYFARLNGLSRKEIKARIAELSKRLQLLEYL-------DRRVG----EFSTGMKQKVAIARA 147 (245)
T ss_pred eecCCcChhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhChHHHH-------HHHHh----hhchhhHHHHHHHHH
Confidence 999776666 4699999998632 1 1244566666777777665 44555 599999999999999
Q ss_pred hcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEeCCEEEEecChh
Q 048639 1039 LLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMDKGEVVEMGSHS 1117 (1139)
Q Consensus 1039 Llr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~~G~ive~G~~~ 1117 (1139)
|+.+|+|++||||||+||..+.+.+++-|++.. ..+.+||+.||-++.++. ||||+++.+|+++..|+++
T Consensus 148 lvh~P~i~vlDEP~sGLDi~~~r~~~dfi~q~k---------~egr~viFSSH~m~EvealCDrvivlh~Gevv~~gs~~ 218 (245)
T COG4555 148 LVHDPSILVLDEPTSGLDIRTRRKFHDFIKQLK---------NEGRAVIFSSHIMQEVEALCDRVIVLHKGEVVLEGSIE 218 (245)
T ss_pred HhcCCCeEEEcCCCCCccHHHHHHHHHHHHHhh---------cCCcEEEEecccHHHHHHhhheEEEEecCcEEEcCCHH
Confidence 999999999999999999999999999999875 333459999999999995 9999999999999999999
Q ss_pred HHhhc
Q 048639 1118 TLVAE 1122 (1139)
Q Consensus 1118 eLl~~ 1122 (1139)
++.++
T Consensus 219 ~l~~r 223 (245)
T COG4555 219 ALDAR 223 (245)
T ss_pred HHHHH
Confidence 99865
No 491
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-39 Score=360.61 Aligned_cols=219 Identities=31% Similarity=0.507 Sum_probs=182.8
Q ss_pred CccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCC-----CccEEEECCccCC----
Q 048639 254 DGNIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDP-----SNGDILIDSLNIK---- 324 (1139)
Q Consensus 254 ~~~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~-----~~G~i~~~g~~~~---- 324 (1139)
.+.|+++|++++|++ +++|+|+||+|++||+++|+|+||||||||+++|+|+.+| ++|+|.++|.++.
T Consensus 14 ~~~l~~~~l~~~~~~---~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~g~~~~~~~~ 90 (265)
T PRK14252 14 QQKSEVNKLNFYYGG---YQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILHPDNVNILSP 90 (265)
T ss_pred CceEEEEEEEEEECC---eeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEcCcccccccc
Confidence 356999999999963 3699999999999999999999999999999999999875 7999999998764
Q ss_pred CCCHHHHhcceEEEecCCCCCcccHHHHHhcCCC--CCC-----HHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCC
Q 048639 325 DLDLKSLRKNIGAVSQEPSLFTGSLMDNIKVGNM--DAD-----DEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLS 397 (1139)
Q Consensus 325 ~~~~~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~--~~~-----~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LS 397 (1139)
..+...+++.++|++|++.+|..|++||+.++.. ... ++++.++++..+ +.+++.+..+..+.+||
T Consensus 91 ~~~~~~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~-------l~~~l~~~~~~~~~~LS 163 (265)
T PRK14252 91 EVDPIEVRMRISMVFQKPNPFPKSIFENVAYGLRIRGVKRRSILEERVENALRNAA-------LWDEVKDRLGDLAFNLS 163 (265)
T ss_pred ccCHHHHhccEEEEccCCcCCcchHHHHHHhHHHHcCCChHHHHHHHHHHHHHHcC-------CchhhhHHHhCCcccCC
Confidence 2344567889999999999999999999987531 111 122222222222 11123345567788999
Q ss_pred hHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhc-cCEEEEEeCcEEEEecC
Q 048639 398 GGQKQRIAIARAIVKNPPILLLDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGT 476 (1139)
Q Consensus 398 gGqkqRi~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~ 476 (1139)
||||||++|||||+++|+++||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||++++|++|++++.|+
T Consensus 164 ~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~tiiivth~~~~~~~~~d~i~~l~~G~i~~~g~ 243 (265)
T PRK14252 164 GGQQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKNKVTILIVTHNMQQAARVSDYTAYMYMGELIEFGA 243 (265)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999999988777899999999999965 99999999999999999
Q ss_pred hhhhhc
Q 048639 477 HHSLLQ 482 (1139)
Q Consensus 477 ~~~l~~ 482 (1139)
++++..
T Consensus 244 ~~~~~~ 249 (265)
T PRK14252 244 TDTIFI 249 (265)
T ss_pred HHHHHh
Confidence 988754
No 492
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=4e-40 Score=356.51 Aligned_cols=206 Identities=26% Similarity=0.443 Sum_probs=169.2
Q ss_pred EEEEeEEEECCCCC-CcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccc---CCccEEEECCcccCCCChHHHh
Q 048639 886 IEFQNIKFNYPSRP-EVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYD---PNEGIILIDGKGIKEYNLRRLR 961 (1139)
Q Consensus 886 I~~~nvsf~Y~~~~-~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~---p~~G~I~idG~di~~~~l~~lR 961 (1139)
+.|+||+++|++.. ..++|+|+||+|++||++||+||||||||||+++|.|+++ |++|+|.+||.++. ...+|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~~---~~~~~ 80 (226)
T cd03234 4 LPWWDVGLKAKNWNKYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPRK---PDQFQ 80 (226)
T ss_pred ceeecceeeeecCccccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEECC---hHHhc
Confidence 67999999998542 3579999999999999999999999999999999999999 99999999999875 34678
Q ss_pred hhceEEccccccccc-cHHHHhccCCC----cCCHH-----HHHH-HHHHcCchHHHhhCCCCccccccCCCCCCChHHH
Q 048639 962 SQIGLVQQEPLLFSC-SIRNNICYGNE----AASEA-----EIVE-VSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQK 1030 (1139)
Q Consensus 962 ~~i~~V~Qdp~LF~g-TIreNL~~~~~----~~sd~-----ei~~-al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQr 1030 (1139)
++++|+||++.+|.+ |++||+.++.. ....+ .+.+ .++..++.+ ........||||||
T Consensus 81 ~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G~~ 149 (226)
T cd03234 81 KCVAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDAIRKKRVEDVLLRDLALTR-----------IGGNLVKGISGGER 149 (226)
T ss_pred ccEEEeCCCCccCcCCcHHHHHHHHHHhhcccccchHHHHHHHHHHHHHhhcchh-----------hhcccccCcCHHHH
Confidence 899999999999987 99999986421 11111 1122 333333322 22334568999999
Q ss_pred HHHHHHHHhcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCc-hhhh-cCCEEEEEeCC
Q 048639 1031 QRIAIARTLLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRL-ATVI-NSDVIVVMDKG 1108 (1139)
Q Consensus 1031 QrlalARALlr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl-~ti~-~~DrI~vl~~G 1108 (1139)
||++|||||+++|++|||||||++||+.+...+.+.|++.. ..+.|+|++||++ +.+. .||+|++|++|
T Consensus 150 qrl~laral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~---------~~~~tiii~sh~~~~~~~~~~d~i~~l~~G 220 (226)
T cd03234 150 RRVSIAVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLA---------RRNRIVILTIHQPRSDLFRLFDRILLLSSG 220 (226)
T ss_pred HHHHHHHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHH---------HCCCEEEEEecCCCHHHHHhCCEEEEEeCC
Confidence 99999999999999999999999999999999999998764 2345699999998 4555 59999999999
Q ss_pred EEEEec
Q 048639 1109 EVVEMG 1114 (1139)
Q Consensus 1109 ~ive~G 1114 (1139)
++++.|
T Consensus 221 ~i~~~g 226 (226)
T cd03234 221 EIVYSG 226 (226)
T ss_pred EEEecC
Confidence 999876
No 493
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.9e-40 Score=355.91 Aligned_cols=214 Identities=34% Similarity=0.570 Sum_probs=179.9
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcceE
Q 048639 257 IDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNIG 336 (1139)
Q Consensus 257 i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 336 (1139)
|+++|++++|++ +++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+. .++.++
T Consensus 1 l~~~~l~~~~~~---~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~~G~i~~~g~~~~~~~~--~~~~i~ 75 (232)
T cd03300 1 IELENVSKFYGG---FVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPTSGEILLDGKDITNLPP--HKRPVN 75 (232)
T ss_pred CEEEeEEEEeCC---eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcceE
Confidence 468999999963 369999999999999999999999999999999999999999999999998876554 257899
Q ss_pred EEecCCCCCcc-cHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHHHccC
Q 048639 337 AVSQEPSLFTG-SLMDNIKVGNM--DADDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARAIVKN 413 (1139)
Q Consensus 337 ~v~Q~~~l~~~-ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARal~~~ 413 (1139)
|++|++.+|.+ |++||+.++.. ........ ..+.+.++.+ |++........+||||||||++|||||+.+
T Consensus 76 ~~~q~~~~~~~~t~~~nl~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~lS~G~~qrl~laral~~~ 148 (232)
T cd03300 76 TVFQNYALFPHLTVFENIAFGLRLKKLPKAEIK-----ERVAEALDLV--QLEGYANRKPSQLSGGQQQRVAIARALVNE 148 (232)
T ss_pred EEecccccCCCCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHHHhcC
Confidence 99999999865 99999986521 11111111 1122334444 445556667789999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhhhhc
Q 048639 414 PPILLLDEATSALDSESEKLVQEALERAMQ--GRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHSLLQ 482 (1139)
Q Consensus 414 ~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 482 (1139)
|+++||||||++||+.+.+.+.+.++++.+ ++|+|++||+++.+.. ||++++|++|++++.|+++++..
T Consensus 149 p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~i~~l~~G~~~~~~~~~~~~~ 220 (232)
T cd03300 149 PKVLLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQEEALTMSDRIAVMNKGKIQQIGTPEEIYE 220 (232)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCHHHHHh
Confidence 999999999999999999999999988753 8999999999999865 99999999999999999888754
No 494
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=1e-39 Score=358.07 Aligned_cols=214 Identities=25% Similarity=0.388 Sum_probs=175.4
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhcc--CCCccEEEECCccCCCCCHHHH-hc
Q 048639 257 IDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFY--DPSNGDILIDSLNIKDLDLKSL-RK 333 (1139)
Q Consensus 257 i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~--~~~~G~i~~~g~~~~~~~~~~~-~~ 333 (1139)
|+++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|++ +|++|+|.++|+++...+.... +.
T Consensus 1 l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 77 (243)
T TIGR01978 1 LKIKDLHVSVED---KEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDERARA 77 (243)
T ss_pred CeEeeEEEEECC---EEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCCCCHHHhhcc
Confidence 478999999963 46999999999999999999999999999999999994 7999999999999887776554 45
Q ss_pred ceEEEecCCCCCcc-cHHHHHhcCCCC---------CCHHHHHHHHHHhcHHHHHHhCCCCCCc-cccccCC-CCChHHH
Q 048639 334 NIGAVSQEPSLFTG-SLMDNIKVGNMD---------ADDEQIYNASMMANAHSFISQLPDQYST-ELGQRGV-QLSGGQK 401 (1139)
Q Consensus 334 ~i~~v~Q~~~l~~~-ti~~ni~~g~~~---------~~~~~~~~~~~~~~~~~~i~~l~~g~~t-~i~~~g~-~LSgGqk 401 (1139)
.++|++|++.++++ |++||+.+.... .+.++. ...+.+.++.+ |+.. ....... +||||||
T Consensus 78 ~i~~v~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~~~LS~G~~ 150 (243)
T TIGR01978 78 GLFLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDF-----LKLLKAKLALL--GMDEEFLNRSVNEGFSGGEK 150 (243)
T ss_pred ceEeeeccccccCCcCHHHHHHHHHHHhhcccccccccHHHH-----HHHHHHHHHHc--CCchhhcccccccCcCHHHH
Confidence 69999999999876 899999764211 011111 11223344444 3332 2334444 5999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCCeEEEEecCccchhc--cCEEEEEeCcEEEEecChh
Q 048639 402 QRIAIARAIVKNPPILLLDEATSALDSESEKLVQEALERAM-QGRTVILIAHRMSTIVN--ADMIAVVEDGQVTETGTHH 478 (1139)
Q Consensus 402 qRi~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~~~~~~~--~d~i~~l~~G~i~~~g~~~ 478 (1139)
||++|||||+.+|+++||||||++||+.+.+.+.+.|+++. +++|+|++||+++.+.. ||++++|++|++++.|+++
T Consensus 151 qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~~~~~~~~d~i~~l~~G~i~~~g~~~ 230 (243)
T TIGR01978 151 KRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQRLLNYIKPDYVHVLLDGRIVKSGDVE 230 (243)
T ss_pred HHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHHHHHhhcCCeEEEEeCCEEEEecCHH
Confidence 99999999999999999999999999999999999998875 47899999999999875 7999999999999999887
Q ss_pred hh
Q 048639 479 SL 480 (1139)
Q Consensus 479 ~l 480 (1139)
++
T Consensus 231 ~~ 232 (243)
T TIGR01978 231 LA 232 (243)
T ss_pred Hh
Confidence 65
No 495
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-39 Score=358.22 Aligned_cols=218 Identities=30% Similarity=0.444 Sum_probs=182.3
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCC-----CccEEEECCccCCCC--CH
Q 048639 256 NIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDP-----SNGDILIDSLNIKDL--DL 328 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~-----~~G~i~~~g~~~~~~--~~ 328 (1139)
.+.+++++++|++ .++|+|+||++++||+++|+|+||||||||+++|+|+++| ++|+|.++|+++... +.
T Consensus 8 ~~~~~~~~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~ 84 (261)
T PRK14263 8 VMDCKLDKIFYGN---FMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDP 84 (261)
T ss_pred eEEEEeEEEEeCC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccch
Confidence 5889999999963 4699999999999999999999999999999999999986 799999999998643 33
Q ss_pred HHHhcceEEEecCCCCCcccHHHHHhcCCCCC-----CHHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHH
Q 048639 329 KSLRKNIGAVSQEPSLFTGSLMDNIKVGNMDA-----DDEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQR 403 (1139)
Q Consensus 329 ~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~~-----~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqR 403 (1139)
..+++.++|++|++.+|+.|++||+.++.... ..+++.++++..++.+. .....++.+.+||||||||
T Consensus 85 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------i~~~~~~~~~~LS~G~~qr 157 (261)
T PRK14263 85 VVVRRYIGMVFQQPNPFSMSIFDNVAFGLRLNRYKGDLGDRVKHALQGAALWDE-------VKDKLKVSGLSLSGGQQQR 157 (261)
T ss_pred HhhhhceEEEecCCccccccHHHHHHHHHhhcCchHHHHHHHHHHHHHcCCchh-------hhhhhhCCcccCCHHHHHH
Confidence 45678899999999999899999998863211 11223333333322111 1223456788999999999
Q ss_pred HHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCCeEEEEecCccchhc-cCEEEEEe--------CcEEEEe
Q 048639 404 IAIARAIVKNPPILLLDEATSALDSESEKLVQEALERAMQGRTVILIAHRMSTIVN-ADMIAVVE--------DGQVTET 474 (1139)
Q Consensus 404 i~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~--------~G~i~~~ 474 (1139)
++|||||+++|++|||||||++||+.++..+.+.++++.+++|+|++||+++.+.. ||+|++|+ +|++++.
T Consensus 158 v~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~~d~v~~l~~~~~~~~~~G~i~~~ 237 (261)
T PRK14263 158 LCIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELKKDYTIALVTHNMQQAIRVADTTAFFSVDISQGTRTGYLVEM 237 (261)
T ss_pred HHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEecccccccCCceEEEe
Confidence 99999999999999999999999999999999999988778899999999998865 99999996 8999999
Q ss_pred cChhhhhcc
Q 048639 475 GTHHSLLQT 483 (1139)
Q Consensus 475 g~~~~l~~~ 483 (1139)
|+++++.+.
T Consensus 238 g~~~~~~~~ 246 (261)
T PRK14263 238 GPTAQIFQN 246 (261)
T ss_pred CCHHHHHhC
Confidence 999998653
No 496
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-39 Score=359.70 Aligned_cols=220 Identities=29% Similarity=0.507 Sum_probs=180.8
Q ss_pred ccEEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCC-----ccEEEECCccCCC--CC
Q 048639 255 GNIDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPS-----NGDILIDSLNIKD--LD 327 (1139)
Q Consensus 255 ~~i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~-----~G~i~~~g~~~~~--~~ 327 (1139)
+.|+++|++++|++ +.+|+|+||++++||+++|+|+||||||||+++|+|+++|+ +|+|.++|+++.. .+
T Consensus 6 ~~l~~~nl~~~~~~---~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~~~~ 82 (261)
T PRK14258 6 PAIKVNNLSFYYDT---QKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYERRVN 82 (261)
T ss_pred ceEEEeeEEEEeCC---eeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhccccc
Confidence 36999999999963 35999999999999999999999999999999999999985 8999999998743 34
Q ss_pred HHHHhcceEEEecCCCCCcccHHHHHhcCCCC--C-CHHHHHHHHHHhcHHHHHHhCC--CCCCccccccCCCCChHHHH
Q 048639 328 LKSLRKNIGAVSQEPSLFTGSLMDNIKVGNMD--A-DDEQIYNASMMANAHSFISQLP--DQYSTELGQRGVQLSGGQKQ 402 (1139)
Q Consensus 328 ~~~~~~~i~~v~Q~~~l~~~ti~~ni~~g~~~--~-~~~~~~~~~~~~~~~~~i~~l~--~g~~t~i~~~g~~LSgGqkq 402 (1139)
...+++.++|++|++.+|+.|++||+.++... . +..+..+. +.+.++.+. +..+...++.+.+|||||||
T Consensus 83 ~~~~~~~i~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~q 157 (261)
T PRK14258 83 LNRLRRQVSMVHPKPNLFPMSVYDNVAYGVKIVGWRPKLEIDDI-----VESALKDADLWDEIKHKIHKSALDLSGGQQQ 157 (261)
T ss_pred hHHhhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHH-----HHHHHHHcCCcchhhhHhcCCcccCCHHHHH
Confidence 45678899999999999999999999875211 0 11111111 112222221 11223456778899999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCCeEEEEecCccchhc-cCEEEEEeC-----cEEEEe
Q 048639 403 RIAIARAIVKNPPILLLDEATSALDSESEKLVQEALERAM--QGRTVILIAHRMSTIVN-ADMIAVVED-----GQVTET 474 (1139)
Q Consensus 403 Ri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~~~~~~~-~d~i~~l~~-----G~i~~~ 474 (1139)
|++|||||+++|++|||||||++||+.+...+.+.++++. .++|+|+|||+++.+.. ||+|++|++ |++++.
T Consensus 158 rv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~~i~~~~d~i~~l~~~~~~~G~i~~~ 237 (261)
T PRK14258 158 RLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLHQVSRLSDFTAFFKGNENRIGQLVEF 237 (261)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhcCEEEEEccCCCcCceEEEe
Confidence 9999999999999999999999999999999999998853 48999999999999876 999999999 999999
Q ss_pred cChhhhhc
Q 048639 475 GTHHSLLQ 482 (1139)
Q Consensus 475 g~~~~l~~ 482 (1139)
|+++++..
T Consensus 238 ~~~~~~~~ 245 (261)
T PRK14258 238 GLTKKIFN 245 (261)
T ss_pred CCHHHHHh
Confidence 99999864
No 497
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=1.7e-39 Score=359.73 Aligned_cols=230 Identities=30% Similarity=0.439 Sum_probs=187.3
Q ss_pred cEEEEeEEEECCCC------CCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCH-
Q 048639 256 NIDIRDVCFAYPSR------PDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDL- 328 (1139)
Q Consensus 256 ~i~~~~v~~~y~~~------~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~- 328 (1139)
.|+++|++|+|+.. .++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.
T Consensus 3 ~l~~~nl~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~sG~i~~~g~~~~~~~~~ 82 (268)
T PRK10419 3 LLNVSGLSHHYAHGGLSGKHQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLESPSQGNVSWRGEPLAKLNRA 82 (268)
T ss_pred eEEEeceEEEecCCccccccCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEeccccChh
Confidence 38899999999731 13569999999999999999999999999999999999999999999999999877654
Q ss_pred --HHHhcceEEEecCCC--CC-cccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCCCc-cccccCCCCChHHHH
Q 048639 329 --KSLRKNIGAVSQEPS--LF-TGSLMDNIKVGNMDADDEQIYNASMMANAHSFISQLPDQYST-ELGQRGVQLSGGQKQ 402 (1139)
Q Consensus 329 --~~~~~~i~~v~Q~~~--l~-~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t-~i~~~g~~LSgGqkq 402 (1139)
..+++.++|++|++. ++ ..|+++|+.+...... ..........+.+.+..+ |+++ ..+..+..|||||||
T Consensus 83 ~~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~--gl~~~~~~~~~~~LS~Ge~q 158 (268)
T PRK10419 83 QRKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHLL--SLDKAERLARASEMLRAV--DLDDSVLDKRPPQLSGGQLQ 158 (268)
T ss_pred HHHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhhc--cCCHHHHHHHHHHHHHHc--CCChhHhhCCCccCChHHHH
Confidence 346788999999983 44 3599999865311000 000111122334556665 5653 567788899999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CCeEEEEecCccchhc-cCEEEEEeCcEEEEecChhh
Q 048639 403 RIAIARAIVKNPPILLLDEATSALDSESEKLVQEALERAMQ--GRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTHHS 479 (1139)
Q Consensus 403 Ri~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~ 479 (1139)
|++|||||+.+|++|||||||++||+.++..+.+.|+++.+ ++|+|++||+++.+.. ||++++|++|++++.|++++
T Consensus 159 rl~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~~~ 238 (268)
T PRK10419 159 RVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLRLVERFCQRVMVMDNGQIVETQPVGD 238 (268)
T ss_pred HHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHHHHHHhCCEEEEEECCEEeeeCChhh
Confidence 99999999999999999999999999999999999988753 7899999999999975 99999999999999999999
Q ss_pred hhccchHHHH
Q 048639 480 LLQTSDFYNR 489 (1139)
Q Consensus 480 l~~~~~~~~~ 489 (1139)
+....+.|..
T Consensus 239 ~~~~~~~~~~ 248 (268)
T PRK10419 239 KLTFSSPAGR 248 (268)
T ss_pred ccCCCCHHHH
Confidence 8765444433
No 498
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=1.3e-39 Score=374.09 Aligned_cols=232 Identities=30% Similarity=0.452 Sum_probs=184.9
Q ss_pred ccEEEEeEEEECCCC--------CCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCcc--CC
Q 048639 255 GNIDIRDVCFAYPSR--------PDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLN--IK 324 (1139)
Q Consensus 255 ~~i~~~~v~~~y~~~--------~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~--~~ 324 (1139)
.-++++|++++|..+ ....+++||||++++||++||||+||||||||.++|+|+.+|++|+|.++|.+ +.
T Consensus 279 ~ll~V~~l~k~y~~~~~~~~~~~~~~~Av~~VSf~l~~GE~lglVGeSGsGKSTlar~i~gL~~P~~G~i~~~g~~~~~~ 358 (539)
T COG1123 279 PLLSVRNLSKRYGSRKGLFVRERGEVKAVDDVSFDLREGETLGLVGESGSGKSTLARILAGLLPPSSGSIIFDGQDLDLT 358 (539)
T ss_pred ceeEeeeeeeeeccccccccccccceeeeeeeeeEecCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEEeCcccccc
Confidence 457899999999742 12468999999999999999999999999999999999999999999999987 23
Q ss_pred CCCHHHHhcceEEEecCCC--CCc-ccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCCCc-cccccCCCCChHH
Q 048639 325 DLDLKSLRKNIGAVSQEPS--LFT-GSLMDNIKVGNMDADDEQIYNASMMANAHSFISQLPDQYST-ELGQRGVQLSGGQ 400 (1139)
Q Consensus 325 ~~~~~~~~~~i~~v~Q~~~--l~~-~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t-~i~~~g~~LSgGq 400 (1139)
.-+....|+++-+|+|+|+ |-+ .||+++|.-........ ..+...+...+.++.. |+.. ....++.+|||||
T Consensus 359 ~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~~~~~~--~~~~~~~rv~~ll~~V--gL~~~~l~ryP~elSGGQ 434 (539)
T COG1123 359 GGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLRIHGGG--SGAERRARVAELLELV--GLPPEFLDRYPHELSGGQ 434 (539)
T ss_pred cchhhhhhhheEEEEeCcccccCccccHHHHHHhHHhhhccc--chHHHHHHHHHHHHHc--CCCHHHHhcCchhcCcch
Confidence 2234567789999999996 333 59999987432100000 0111112223333333 2333 4678889999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CCeEEEEecCccchhc-cCEEEEEeCcEEEEecCh
Q 048639 401 KQRIAIARAIVKNPPILLLDEATSALDSESEKLVQEALERAMQ--GRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGTH 477 (1139)
Q Consensus 401 kqRi~lARal~~~~~illlDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~ 477 (1139)
|||+||||||..+|+++++|||||+||+-++..+.+.|+++.+ |.|.|+||||++.++. ||||+||++|+|+|.|+.
T Consensus 435 rQRvaIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~~lq~e~g~t~lfISHDl~vV~~i~drv~vm~~G~iVE~G~~ 514 (539)
T COG1123 435 RQRVAIARALALEPKLLILDEPVSALDVSVQAQVLNLLKDLQEELGLTYLFISHDLAVVRYIADRVAVMYDGRIVEEGPT 514 (539)
T ss_pred hHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHhhCceEEEEECCeEEEeCCH
Confidence 9999999999999999999999999999999999999998764 7999999999999987 999999999999999999
Q ss_pred hhhhcc-chHHHHH
Q 048639 478 HSLLQT-SDFYNRL 490 (1139)
Q Consensus 478 ~~l~~~-~~~~~~~ 490 (1139)
+++.+. ...|.+.
T Consensus 515 ~~v~~~p~h~Ytr~ 528 (539)
T COG1123 515 EKVFENPQHPYTRK 528 (539)
T ss_pred HHHhcCCCChHHHH
Confidence 998765 3344433
No 499
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-39 Score=357.96 Aligned_cols=204 Identities=27% Similarity=0.437 Sum_probs=173.6
Q ss_pred EEEEeEEEECCCCCCcccccceeEEEeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEECCcccCCCChHHHhhhce
Q 048639 886 IEFQNIKFNYPSRPEVTVLNNFSLQIEPGLKVALVGPSGAGKSSVLALLLRFYDPNEGIILIDGKGIKEYNLRRLRSQIG 965 (1139)
Q Consensus 886 I~~~nvsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIvG~sGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~ 965 (1139)
|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++... +.+++
T Consensus 2 l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-----~~~~~ 73 (255)
T PRK11248 2 LQISHLYADYGG---KPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSITLDGKPVEGP-----GAERG 73 (255)
T ss_pred EEEEEEEEEeCC---eeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCC-----CCcEE
Confidence 789999999963 4699999999999999999999999999999999999999999999999988642 34689
Q ss_pred EEcccccccc-ccHHHHhccCCC--cCC----HHHHHHHHHHcCchHHHhhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 048639 966 LVQQEPLLFS-CSIRNNICYGNE--AAS----EAEIVEVSKKANIHDFISSLPDGYDTVVGEKGCQLSGGQKQRIAIART 1038 (1139)
Q Consensus 966 ~V~Qdp~LF~-gTIreNL~~~~~--~~s----d~ei~~al~~~~l~~~i~~lp~gldt~v~e~G~~LSgGQrQrlalARA 1038 (1139)
|+||++.+|. .|+++|+.++.. ... ++++.++++..++.+...+ ...+||||||||++||||
T Consensus 74 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~-----------~~~~LSgGq~qrl~lara 142 (255)
T PRK11248 74 VVFQNEGLLPWRNVQDNVAFGLQLAGVEKMQRLEIAHQMLKKVGLEGAEKR-----------YIWQLSGGQRQRVGIARA 142 (255)
T ss_pred EEeCCCccCCCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhHhhC-----------ChhhCCHHHHHHHHHHHH
Confidence 9999999886 699999986421 111 3457778888887655433 235799999999999999
Q ss_pred hcCCCCEEEeeccccCCCHHHHHHHHHHHHhhCCCCCCccccCCCeEEEEEecCchhhhc-CCEEEEEe--CCEEEEecC
Q 048639 1039 LLKRPAIMLLDEATSALDAESERVIVSALEALNPKSSSCGELASRTTQITVAHRLATVIN-SDVIVVMD--KGEVVEMGS 1115 (1139)
Q Consensus 1039 Llr~p~ILlLDEaTS~LD~~te~~I~~~l~~~~~~~~~~~~~~~~tTvI~IaHrl~ti~~-~DrI~vl~--~G~ive~G~ 1115 (1139)
|+++|++|||||||++||+.+...+.+.|++... .+++|+|+|||+++.+.. ||+|++|+ +|++++.++
T Consensus 143 l~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~--------~~g~tviivsH~~~~~~~~~d~i~~l~~~~G~i~~~~~ 214 (255)
T PRK11248 143 LAANPQLLLLDEPFGALDAFTREQMQTLLLKLWQ--------ETGKQVLLITHDIEEAVFMATELVLLSPGPGRVVERLP 214 (255)
T ss_pred HhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHH--------hcCCEEEEEeCCHHHHHHhCCEEEEEeCCCcEEEEEec
Confidence 9999999999999999999999999999987530 224569999999999876 99999998 599999875
Q ss_pred h
Q 048639 1116 H 1116 (1139)
Q Consensus 1116 ~ 1116 (1139)
.
T Consensus 215 ~ 215 (255)
T PRK11248 215 L 215 (255)
T ss_pred C
Confidence 4
No 500
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=2.1e-39 Score=347.44 Aligned_cols=202 Identities=32% Similarity=0.536 Sum_probs=169.5
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCCEEEEECCCCCcHHHHHHHHHhccCCCccEEEECCccCCCCCHHHHhcceE
Q 048639 257 IDIRDVCFAYPSRPDQLILKGFSLSIPAGKMVALVGSSGCGKSTVISLVARFYDPSNGDILIDSLNIKDLDLKSLRKNIG 336 (1139)
Q Consensus 257 i~~~~v~~~y~~~~~~~~l~~is~~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 336 (1139)
++++|++++|+. .++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+ .+++.++
T Consensus 1 ~~~~~l~~~~~~-----~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~--~~~~~i~ 73 (213)
T TIGR01277 1 LALDKVRYEYEH-----LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPASGSIKVNDQSHTGLA--PYQRPVS 73 (213)
T ss_pred CeEEeeeEEeCC-----cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEcccCC--hhccceE
Confidence 368999999952 468999999999999999999999999999999999999999999999886543 3567899
Q ss_pred EEecCCCCCcc-cHHHHHhcCC-CCC--C---HHHHHHHHHHhcHHHHHHhCCCCCCccccccCCCCChHHHHHHHHHHH
Q 048639 337 AVSQEPSLFTG-SLMDNIKVGN-MDA--D---DEQIYNASMMANAHSFISQLPDQYSTELGQRGVQLSGGQKQRIAIARA 409 (1139)
Q Consensus 337 ~v~Q~~~l~~~-ti~~ni~~g~-~~~--~---~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~g~~LSgGqkqRi~lARa 409 (1139)
|++|+|.+|.. |++||+.++. +.. . .+++. +.++.+ |+.........+||||||||++||||
T Consensus 74 ~v~q~~~~~~~~t~~en~~~~~~~~~~~~~~~~~~~~---------~~l~~~--~l~~~~~~~~~~LS~G~~qrl~lara 142 (213)
T TIGR01277 74 MLFQENNLFAHLTVRQNIGLGLHPGLKLNAEQQEKVV---------DAAQQV--GIADYLDRLPEQLSGGQRQRVALARC 142 (213)
T ss_pred EEeccCccCCCCcHHHHHHhHhhccCCccHHHHHHHH---------HHHHHc--CcHHHhhCCcccCCHHHHHHHHHHHH
Confidence 99999999875 9999998642 111 1 11222 233333 33334455567899999999999999
Q ss_pred HccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCCeEEEEecCccchhc-cCEEEEEeCcEEEEecC
Q 048639 410 IVKNPPILLLDEATSALDSESEKLVQEALERAM--QGRTVILIAHRMSTIVN-ADMIAVVEDGQVTETGT 476 (1139)
Q Consensus 410 l~~~~~illlDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~ 476 (1139)
++.+|+++||||||++||+.++..+.+.|.++. .++|+|++||+++.+.. ||++++|++|++++.|.
T Consensus 143 l~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~tii~vsh~~~~~~~~~d~v~~l~~g~i~~~~~ 212 (213)
T TIGR01277 143 LVRPNPILLLDEPFSALDPLLREEMLALVKQLCSERQRTLLMVTHHLSDARAIASQIAVVSQGKIKVVSD 212 (213)
T ss_pred HhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCeEEEEECCeEEEecC
Confidence 999999999999999999999999999998875 37899999999999875 99999999999998874
Done!