STRING 9.05 
  LOC_Os04g34240.1 protein (Oryza sativa Japonica) - STRING network view
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
LOC_Os04g34240.1
histone H3, putative, expressed; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (274 aa)
(Oryza sativa Japonica)
Predicted Functional Partners:
4327457
Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed; Core component of nu [...] (103 aa)
       0.806
OsJ_18830
Core histone H2A/H2B/H3/H4 domain containing protein, putative; Core component of nucleosome. N [...] (103 aa)
       0.804
4332612
SET domain containing protein, expressed (895 aa)
       0.665
4333919
actin, putative, expressed; Actins are highly conserved proteins that are involved in various t [...] (377 aa)
       0.661
4349863
actin, putative, expressed; Actins are highly conserved proteins that are involved in various t [...] (407 aa)
       0.551
4337566
actin, putative, expressed; Actins are highly conserved proteins that are involved in various t [...] (377 aa)
       0.550
4343694
tubulin/FtsZ domain containing protein, putative, expressed; Tubulin is the major constituent o [...] (450 aa)
       0.545
4333966
tubulin/FtsZ domain containing protein, putative, expressed; Tubulin is the major constituent o [...] (451 aa)
       0.544
4352398
Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed; Variant histone H2A [...] (138 aa)
       0.540
4352128
core histone H2A/H2B/H3/H4, putative, expressed; Core component of nucleosome. Nucleosomes wrap [...] (135 aa)
       0.540
 
  Views:                    
   Neighborhood  Fusion  Occurence  Coexpression  Experiments  Database  Textmining      Summary Network

 

Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes

 Server load: very high (>100%)
Permalink