Query 048642
Match_columns 782
No_of_seqs 467 out of 3127
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 20:11:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048642.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/048642hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i6s_A Subtilisin-like proteas 100.0 3E-119 1E-123 1046.4 49.4 629 118-774 1-645 (649)
2 3vta_A Cucumisin; subtilisin-l 100.0 2E-109 8E-114 967.5 49.6 612 118-773 1-619 (621)
3 1xf1_A C5A peptidase, SCP; hyd 100.0 1.1E-82 3.9E-87 771.5 44.2 544 135-779 6-611 (926)
4 3afg_A Subtilisin-like serine 100.0 4E-61 1.4E-65 550.2 38.1 366 30-633 35-418 (539)
5 2z2z_A TK-subtilisin precursor 100.0 2.2E-59 7.5E-64 519.4 18.8 345 30-633 2-392 (395)
6 3t41_A Epidermin leader peptid 100.0 5.4E-56 1.9E-60 504.8 27.6 336 74-634 66-466 (471)
7 1y9z_A Alkaline serine proteas 100.0 5.1E-56 1.8E-60 499.4 24.8 389 125-654 6-437 (441)
8 2p4e_P Proprotein convertase s 100.0 7E-58 2.4E-62 525.0 6.5 339 31-600 76-422 (692)
9 1r6v_A Subtilisin-like serine 100.0 1.5E-54 5.2E-59 501.0 30.4 380 27-644 28-450 (671)
10 1gci_A Subtilisin; hydrolase, 100.0 1.3E-52 4.5E-57 440.1 20.9 257 135-632 13-269 (269)
11 1r0r_E Subtilisin carlsberg; h 100.0 9.9E-53 3.4E-57 442.8 19.1 258 135-632 13-274 (274)
12 1dbi_A AK.1 serine protease; h 100.0 3.3E-52 1.1E-56 439.9 22.1 260 135-632 20-279 (280)
13 1to2_E Subtilisin BPN'; serine 100.0 1.7E-52 6E-57 442.3 19.6 267 125-633 6-276 (281)
14 4h6x_A Thiazoline oxidase/subt 100.0 1.6E-53 5.5E-58 465.6 10.9 305 136-632 21-337 (357)
15 2x8j_A Intracellular subtilisi 100.0 2.6E-52 9E-57 450.3 16.9 273 125-633 23-311 (327)
16 1thm_A Thermitase; hydrolase(s 100.0 1.5E-51 5.2E-56 434.9 21.3 259 135-632 20-278 (279)
17 2z30_A TK-subtilisin; thermoco 100.0 1.7E-51 5.9E-56 443.4 14.7 273 125-633 10-317 (320)
18 3zxy_A Subtilisin-like protein 100.0 2.2E-51 7.4E-56 435.2 15.2 266 142-632 3-274 (282)
19 2ixt_A 36KDA protease; serine 100.0 3.3E-50 1.1E-54 432.3 23.1 282 135-627 15-309 (310)
20 4h6w_A N-terminal cyanobactin 100.0 5E-51 1.7E-55 438.1 15.6 273 136-633 11-288 (306)
21 2iy9_A SUBA; toxin, shiga, pla 100.0 2.6E-50 9E-55 439.8 15.1 271 135-633 32-329 (347)
22 3lxu_X Tripeptidyl-peptidase 2 100.0 4.6E-49 1.6E-53 472.7 27.1 361 222-775 267-654 (1354)
23 3lpc_A APRB2; protease, subtil 100.0 5.7E-49 2E-53 428.3 18.7 298 135-633 21-337 (340)
24 1sh7_A Extracellular subtilisi 100.0 3E-48 1E-52 410.0 22.8 237 135-601 18-257 (284)
25 1wmd_A Protease; alpha-beta hy 100.0 9E-49 3.1E-53 440.1 19.5 295 135-634 10-319 (434)
26 2b6n_A Proteinase K; S binding 100.0 1.1E-47 3.7E-52 405.2 21.9 238 135-600 20-260 (278)
27 4dzt_A Aqualysin-1, aqualysin- 100.0 1.3E-47 4.4E-52 404.8 20.4 240 134-603 19-261 (276)
28 2oxa_A Extracellular serine pr 100.0 3.5E-47 1.2E-51 443.3 25.9 301 134-639 58-431 (600)
29 2pwa_A Proteinase K; structure 100.0 9.3E-48 3.2E-52 405.2 17.8 240 138-627 24-271 (279)
30 1p8j_A Furin precursor; prohor 100.0 1.2E-46 4.1E-51 426.4 24.7 295 134-637 26-334 (471)
31 2id4_A Kexin; KEX2, kexin, fur 100.0 2.6E-46 9E-51 426.3 23.2 286 134-636 42-345 (503)
32 2qtw_B Proprotein convertase s 100.0 3.9E-46 1.3E-50 417.2 17.9 291 125-632 4-313 (546)
33 3f7m_A Alkaline serine proteas 100.0 5.6E-46 1.9E-50 392.9 18.1 230 137-601 24-261 (279)
34 3hjr_A Extracellular serine pr 100.0 8.4E-45 2.9E-49 425.0 28.0 301 134-638 58-430 (600)
35 1t1e_A Kumamolisin; proenzyme, 99.9 2.2E-25 7.6E-30 254.3 9.2 97 252-356 273-383 (552)
36 1ga6_A Serine-carboxyl protein 99.9 6.4E-22 2.2E-26 215.2 9.9 100 254-357 90-207 (372)
37 3edy_A Tripeptidyl-peptidase 1 99.0 8.1E-10 2.8E-14 125.1 10.9 77 280-356 283-374 (544)
38 2w2n_P Proprotein convertase s 99.0 4.6E-10 1.6E-14 100.3 5.9 79 28-116 35-113 (114)
39 3cnq_P Subtilisin BPN'; unclea 98.9 1E-08 3.6E-13 85.6 9.7 74 28-120 6-79 (80)
40 3icu_A E3 ubiquitin-protein li 98.8 2.6E-08 8.8E-13 96.6 11.6 94 404-497 82-187 (194)
41 2qtw_A Proprotein convertase s 98.7 1.6E-08 5.4E-13 91.4 5.9 78 29-116 46-123 (124)
42 1v5i_B POIA1, IA-1=serine prot 98.6 1.2E-07 3.9E-12 78.2 7.7 70 31-116 3-75 (76)
43 2z30_B TK-subtilisin; thermoco 97.3 0.00042 1.4E-08 54.8 6.1 44 71-115 20-63 (65)
44 2ek8_A Aminopeptidase; metallo 96.7 0.0039 1.3E-07 68.8 9.8 74 411-484 106-182 (421)
45 3iib_A Peptidase M28; YP_92679 96.1 0.017 5.9E-07 64.0 10.5 82 415-496 124-226 (444)
46 3kas_A Transferrin receptor pr 95.7 0.017 5.9E-07 66.6 8.0 69 416-484 128-230 (640)
47 3fed_A Glutamate carboxypeptid 95.6 0.018 6.1E-07 67.1 7.8 71 415-485 150-268 (707)
48 2ys4_A Hydrocephalus-inducing 95.2 0.047 1.6E-06 48.8 7.5 74 689-771 41-116 (122)
49 3qbt_B Inositol polyphosphate 90.7 1.9 6.7E-05 39.1 11.0 84 689-773 43-137 (140)
50 3lxu_X Tripeptidyl-peptidase 2 88.5 0.27 9.3E-06 60.5 4.3 24 142-165 32-55 (1354)
51 2e6j_A Hydin protein; PAPD, st 87.5 1.9 6.3E-05 37.3 8.1 79 689-772 26-108 (112)
52 1y9z_A Alkaline serine proteas 85.8 0.47 1.6E-05 52.3 4.1 30 505-542 183-212 (441)
53 2r39_A FIXG-related protein; s 82.4 11 0.00038 32.8 10.8 53 690-744 32-85 (118)
54 3qis_A Inositol polyphosphate 77.6 20 0.0007 38.0 13.0 92 681-773 36-140 (366)
55 2qsv_A Uncharacterized protein 76.2 14 0.00047 36.2 10.4 80 689-773 19-105 (220)
56 3idu_A Uncharacterized protein 71.7 17 0.00058 32.2 8.7 51 688-742 32-84 (127)
57 3zyz_A Beta-D-glucoside glucoh 66.7 10 0.00034 44.2 7.8 54 689-744 613-675 (713)
58 2x41_A Beta-glucosidase; hydro 62.0 12 0.00042 43.6 7.5 66 677-744 598-678 (721)
59 2qsv_A Uncharacterized protein 59.0 61 0.0021 31.4 10.9 77 689-771 134-218 (220)
60 1m1s_A WR4; structural genomic 44.6 92 0.0031 27.0 8.3 51 691-744 25-76 (116)
61 3abz_A Beta-glucosidase I; gly 43.6 59 0.002 38.5 9.2 66 676-743 717-798 (845)
62 1z9l_A Vesicle-associated memb 43.2 64 0.0022 28.3 7.4 52 689-743 27-79 (128)
63 1w8o_A Bacterial sialidase; 3D 43.1 1.8E+02 0.0061 32.6 13.2 63 678-744 363-427 (601)
64 1msp_A MSP, major sperm protei 41.0 72 0.0025 28.0 7.3 51 690-743 26-77 (126)
65 3isy_A Bsupi, intracellular pr 40.1 1.6E+02 0.0054 25.6 9.1 68 688-758 17-103 (120)
66 1row_A SSP-19, MSP-domain prot 39.1 1E+02 0.0036 26.2 7.8 50 692-744 18-68 (109)
67 1wic_A Hypothetical protein ri 38.3 68 0.0023 29.2 6.9 51 690-743 36-87 (152)
68 1wgl_A TOLL-interacting protei 33.6 27 0.00092 26.4 2.7 32 566-597 5-36 (59)
69 2cri_A Vesicle-associated memb 33.0 78 0.0027 28.5 6.4 52 689-743 31-83 (147)
70 2l0d_A Cell surface protein; s 32.7 1.4E+02 0.0049 25.6 7.6 24 688-711 18-43 (114)
71 2kq1_A BH0266 protein; solutio 28.6 13 0.00045 32.4 0.3 50 694-743 58-110 (119)
72 3sd2_A Putative member of DUF3 26.4 2.4E+02 0.0082 23.6 7.5 64 681-757 35-99 (101)
73 3e9t_A Na/Ca exchange protein; 24.7 3.1E+02 0.011 23.2 8.5 62 680-744 10-78 (114)
74 1ni7_A ER75, hypothetical prot 23.1 59 0.002 29.8 3.5 33 559-592 78-110 (155)
75 2qvk_A CBD2, sodium/calcium ex 21.6 2.4E+02 0.0081 26.7 7.5 62 680-744 13-82 (192)
76 3hrz_B Cobra venom factor; ser 21.2 2.7E+02 0.0094 27.3 8.5 65 676-743 85-155 (252)
77 2kut_A Uncharacterized protein 20.6 65 0.0022 28.2 3.2 54 689-744 16-75 (122)
78 3fso_A Integrin beta-4, GP150; 20.4 1.8E+02 0.0062 25.1 6.2 61 679-742 12-79 (123)
79 3q48_A Chaperone CUPB2; IG fol 20.1 5.3E+02 0.018 25.4 10.3 83 689-775 42-148 (257)
No 1
>3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A*
Probab=100.00 E-value=3.2e-119 Score=1046.35 Aligned_cols=629 Identities=39% Similarity=0.675 Sum_probs=569.3
Q ss_pred ccccccccccccCCcccCCCccccCCCCCceEEEEecCCcCcCCCCccCCCCCCCCCCccccccCCCC-Ccccccccccc
Q 048642 118 TTRSWDFMLLENNGVIHSSSAWGKGRFGEDIIIANLDTGVWPESKSFSDEGYGPVPSRWKGTCQNSTK-EGVRCNRKLIG 196 (782)
Q Consensus 118 ~~~s~~~~g~~~~~~~~~~~~w~~~~~G~gV~VaVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~-~~~~~~~ki~g 196 (782)
|+++|+|+|+.. ...+|..+.+|+||+|||||||||++||+|.+.+++|+|.+|+|.|+.+.+ +...||+|+++
T Consensus 1 Tt~s~~flgl~~-----~~~~w~~~~~G~gViVaViDTGId~~Hp~f~d~g~~p~p~~wkg~c~~g~~f~~~~cN~kiig 75 (649)
T 3i6s_A 1 TTHTSDFLKLNP-----SSGLWPASGLGQDVIVAVLDSGIWPESASFQDDGMPEIPKRWKGICKPGTQFNASMCNRKLIG 75 (649)
T ss_dssp CCSHHHHTTCCS-----SSSHHHHHGGGTTCEEEEEESCBCTTSGGGCCTTCCCCCTTCCCCBCCBTTBCTTSCCSSEEE
T ss_pred CCCChHHcCCCC-----chhhHhccCCCCCCEEEEEccCCCCCChhhccCCCCCCccccccccccCccccccccccceee
Confidence 578999999974 357999999999999999999999999999999999999999999999988 77899999999
Q ss_pred cccchhhHhhhcccccccccCCCCCCCCCCccchhhhhhhccCCCCccccccCCCcceecCccccccccccccCCCCCCC
Q 048642 197 ARYFNRAYAAYVKQHNISVNFNNTARDHEGHGTHTLSTAGGNLVPGVNVFGMGNGTAKGGSPKARVAAYKVCWPQVSDGQ 276 (782)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~l~~~kv~~~~~~~g~ 276 (782)
.++|.+++.... .+... +..+++|..||||||||||||+.+++.+.+|++.+.+.||||+|+|++||+|+.. +
T Consensus 76 ~~~f~~~~~~~~--~~~~~-~~~~~~D~~GHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~----g 148 (649)
T 3i6s_A 76 ANYFNKGILAND--PTVNI-TMNSARDTDGHGTHCASITAGNFAKGVSHFGYAPGTARGVAPRARLAVYKFSFNE----G 148 (649)
T ss_dssp EEECCHHHHHHC--TTCCC-TTCSSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSSTTCEEEEEECEETT----E
T ss_pred eEeccCcccccc--ccccc-CCCCCCCCCCcHHHHHHHHhCCCCcCccccccccCceeEECCCCEEEEEeccCCC----C
Confidence 999998876543 22222 4567889999999999999999988888999988999999999999999999977 4
Q ss_pred CChhHHHHHHHHhhhCCCeEEEEccCCCCCCCCCCHHHHHHHHHHhcCcEEEEecCCCCCCCCcccCCCCcEEEEccccC
Q 048642 277 CFDADILKGFDMAIHDGVDVISVSLGGDPADYFNDGTAIGAFHAVKHGIVVVCSAANSGPELGTVTNVSPWIITVGASTL 356 (782)
Q Consensus 277 ~~~~~i~~ai~~a~~~g~dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVgas~~ 356 (782)
|..+++++||+||+++|+||||||||.....+..+++.+++++|+++|++||+||||+|+...++.+.+||+|+|||++.
T Consensus 149 ~~~~~i~~Ai~~A~~~gvdVIn~SlG~~~~~~~~~~i~~a~~~A~~~Gi~vV~AAGN~G~~~~t~~~~ap~vitVgAst~ 228 (649)
T 3i6s_A 149 TFTSDLIAAMDQAVADGVDMISISYGYRFIPLYEDAISIASFGAMMKGVLVSASAGNRGPGIGSLNNGSPWILCVASGHT 228 (649)
T ss_dssp ECHHHHHHHHHHHHHTTCSEEEECCCCCSCCGGGCHHHHHHHHHHHTTCEEEEECCSCTTSTTCCSCCCTTSEEEEEEEC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCccCCcccchhHHHHHHHHHHhCCcEEEEeCCCCCCCCCccCCCCCceEEEeeeec
Confidence 89999999999999999999999999886677889999999999999999999999999999999999999999999999
Q ss_pred CccceeeEEecCCeEEeeeeccCCCCCCcccceEecccccccCCCcccccccCCCCCCCCCc--cceEEEEeeCCcchhh
Q 048642 357 DREFQNFVELRNGQRFKGTSLSKSLPNDTFYPLITGLQAKAANADDTAASLCKNGALDHEKV--KGKILVCLRGDTARVD 434 (782)
Q Consensus 357 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~c~~~~~~~~~~--~gkivl~~~g~~~~~~ 434 (782)
+|.|...+.++++..+.|.+++........+|+++.. ....|.+..++...+ +||||+|+|+.|.+.+
T Consensus 229 dr~f~~~~~lgng~~~~g~sl~~~~~~~~~~plv~~~----------~~~~C~~~~l~~~~vdl~GkIvlc~~g~~~~~~ 298 (649)
T 3i6s_A 229 DRTFAGTLTLGNGLKIRGWSLFPARAFVRDSPVIYNK----------TLSDCSSEELLSQVENPENTIVICDDNGDFSDQ 298 (649)
T ss_dssp SCEEEEEEEETTSCEEEEECCCSSCBCEEEEEEECCT----------TTTTCCCHHHHTTSSSGGGCEEEECCCSCHHHH
T ss_pred ccceeeEEEeCCCcEEeeeecccCcccCcceeeEecc----------cccccccccccccccccCCcEEEEeCCCccHHH
Confidence 9999999999999999999998776556779999854 356899988888777 9999999999999999
Q ss_pred hhHHHHHcCceEEEEeccCCCCCccccCCCcccEEEEehhhHHHHHHHHhcCCCceEEEecCeeeccCCCCCccccccCC
Q 048642 435 KGRQAAVAGAVGMILCNDKSSGNEITADPHFLPASQITYKDGVKVLDYIKSSDNPMGYITSPSTYLNAKPSPFMASFSSA 514 (782)
Q Consensus 435 ~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~ 514 (782)
|..+++++|+.|+|++|+. .....+.+.+|+++|+.++|..|++|++++.+++++|.+..+..+..+.+.++.||||
T Consensus 299 k~~~~~~~Ga~g~i~~n~~---~~~~~~~~~~P~~~v~~~~g~~i~~yi~s~~~~~a~i~~~~t~~~~~~~~~va~FSSr 375 (649)
T 3i6s_A 299 MRIITRARLKAAIFISEDP---GVFRSATFPNPGVVVNKKEGKQVINYVKNSVTPTATITFQETYLDTKPAPVVAASSAR 375 (649)
T ss_dssp HHHHHHHTCSEEEEECCCG---GGGGCCCCCSCEEEECHHHHHHHHHHHHTCSSCEEEEEEEEEECCCSSCCEECTTSCC
T ss_pred HHHHHHhcCceEEEEecCc---cccccccCcCCEEEEcHHHHHHHHHHHhcCCCceEEEeecceeeccCCCCcccccCCC
Confidence 9999999999999999987 4556677899999999999999999999999999999999999988889999999999
Q ss_pred CCCCCCCCCcCCeEEeCCceEEEeecCCCCCCCCCCCC-CCcceeeeccccchhhHHHHHHHHHHhhCCCCCHHHHHHHH
Q 048642 515 GPNKITPEILKPDITAPGVNIIAAFTGAIGATELPYDT-RRIPYNIMSGTSMSCPHVAGVVGLLKTAHPDWSPSAIRSAI 593 (782)
Q Consensus 515 Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~-~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~sp~~ik~~L 593 (782)
||+...+++|||||+|||++|+++++..........+. ....|..+||||||||||||+||||||+||+|+|++||++|
T Consensus 376 GP~~~~~~ilKPDI~APG~~Ilsa~~~~~~~~~~~~d~~~~~~y~~~SGTSMAaPhVAGvaALlks~~P~~Spa~IksaL 455 (649)
T 3i6s_A 376 GPSRSYLGISKPDILAPGVLILAAYPPNVFATSIGTNILLSTDYILESGTSMAAPHAAGIAAMLKAAHPEWSPSAIRSAM 455 (649)
T ss_dssp SSCTTCTTSCSCCEEEECSSEEEECCTTSCCEEETTTEEECCSEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHH
T ss_pred CCCCCCCCccCCeEEeCCCCeEeecCCCCCccccccccccccceecccccccccHHHHHHHHHHHHhCCCCCHHHHHHHH
Confidence 99987789999999999999999999865443333332 34589999999999999999999999999999999999999
Q ss_pred HhccccccCCCCCCCCC-CCCCCCCCcccccccCccccCCCCccccCCcchhhhhcccCCCCccceeeeccceec--ccC
Q 048642 594 MTTARTRDNTANPMRDG-SFKKATPFSYGSGHIRPNRAMDPGLVYDLSEDDYLDFLCSIGYNQTTIKRFFGTQYE--CSK 670 (782)
Q Consensus 594 ~~TA~~~~~~g~~~~~~-~~~~~~~~~~G~G~vd~~~A~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 670 (782)
|+||.++++.+.++.+. .+.+++++.||+|+||+.+|++||||||.+.+||+.|||+++|+.++|+.+++.++. |+.
T Consensus 456 mtTA~~~~~~g~~i~~~~~~~~a~~~~~GaG~vn~~~A~~pGLvyd~~~~dy~~flc~~~y~~~~i~~~~~~~~~~~C~~ 535 (649)
T 3i6s_A 456 MTTADPLDNTRKPIKDSDNNKAATPLDMGAGHVDPNRALDPGLVYDATPQDYVNLLCSLNFTEEQFKTIARSSASHNCSN 535 (649)
T ss_dssp HHTCBCBCTTSSBCEETTTSSBCCHHHHTTCBCCHHHHTCCSEECCCCHHHHHHHHHTTCCCHHHHHHHHTTTSCC-CCC
T ss_pred hcccccccCCCCcccccccCCcCCcCCCCeeeeCHHHhcCccccccCCchhHHHhhhcCCCCcccceeeecCCCcCCCCC
Confidence 99999999999998875 466888999999999999999999999999999999999999999999999998888 986
Q ss_pred CCCCCCCCCCcEEeec-cCce-----EEEEEEEEecCC-CCeEEEEEeCCCCceEEEEecEEEEccCCcEEEEEEEEEec
Q 048642 671 SANLEDFNYPSISVPM-ISGS-----VTLSRKLKNVGS-PSNYAASVREPLGISVSVEPKILAFKKIGEEKSFKVTLKPK 743 (782)
Q Consensus 671 ~~~~~~~n~ps~~~~~-~~~~-----~t~~~tv~n~~~-~~ty~~~~~~~~g~~v~v~p~~~~~~~~~~~~~~~vt~~~~ 743 (782)
...+||||||++.. +.+. ++|+|||||||+ ..+|+++++.|.|++|+|+|++|+|++.+|+++|+|||+..
T Consensus 536 --~~~~lNyPs~~~~~~~~~~~~~~~~~~~Rtvtnvg~~~~~y~~~v~~p~g~~v~v~P~~l~f~~~~~~~~f~v~~~~~ 613 (649)
T 3i6s_A 536 --PSADLNYPSFIALYSIEGNFTLLEQKFKRTVTNVGKGAATYKAKLKAPKNSTISVSPQILVFKNKNEKQSYTLTIRYI 613 (649)
T ss_dssp --CCCCCCCSSEEEEECCSSCCCCEEEEEEEEEEECC--CEEEEEEEECCTTEEEEEESSEEEECC-CCEEEEEEEEEEC
T ss_pred --chhhcCCCcEEeecccCCCCccceEEEEEEEEEeCCCCcEEEEEEecCCCCEEEEECCEEEEecCCCEEEEEEEEEec
Confidence 46799999999987 4555 899999999999 89999999999999999999999998899999999999986
Q ss_pred CCCCCCceEEEEEEEEc--CCcEEEEEEEEEEc
Q 048642 744 WSGAPDNYRFGELTWTD--GKHYVRSPIVVNQA 774 (782)
Q Consensus 744 ~~~~~~~~~~G~i~~~~--~~~~v~~P~~~~~~ 774 (782)
. ...+.|.||+|+|++ +.|.||+|++++..
T Consensus 614 ~-~~~~~~~fg~l~w~~~~~~h~vrsPi~v~~~ 645 (649)
T 3i6s_A 614 G-DEGQSRNVGSITWVEQNGNHSVRSPIVTSPI 645 (649)
T ss_dssp C-C---CCCEEEEEEEETTSCCEEEEEEEEEEC
T ss_pred c-cCCCceEEEEEEEEcCCCCeEEEEeEEEEEc
Confidence 5 456678999999999 89999999999864
No 2
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo}
Probab=100.00 E-value=2.2e-109 Score=967.49 Aligned_cols=612 Identities=42% Similarity=0.772 Sum_probs=518.8
Q ss_pred ccccccccccccCCcccCCCccccCCCCCceEEEEecCCcCcCCCCccCCCCCCCCCCccccccCCCCCccccccccccc
Q 048642 118 TTRSWDFMLLENNGVIHSSSAWGKGRFGEDIIIANLDTGVWPESKSFSDEGYGPVPSRWKGTCQNSTKEGVRCNRKLIGA 197 (782)
Q Consensus 118 ~~~s~~~~g~~~~~~~~~~~~w~~~~~G~gV~VaVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~~~ki~g~ 197 (782)
|+++|+|+||+ ..+|....+|+||+|||||||||++||+|++++++|++.+|+|.|+.+.+ +.||+|++++
T Consensus 1 tt~s~~flGl~-------~~~~~~~~~G~gViVgViDTGId~~Hp~f~d~g~~~~~~~w~g~~~~~~~--~~~n~k~ig~ 71 (621)
T 3vta_A 1 TTRSWDFLGFP-------LTVPRRSQVESNIVVGVLDTGIWPESPSFDDEGFSPPPPKWKGTCETSNN--FRCNRKIIGA 71 (621)
T ss_dssp CCSHHHHTTCC-------TTCCCCHHHHTTCEEEEEESCBCTTSGGGCCTTCCCCCTTCCCCBCCSSS--CCCCSSEEEE
T ss_pred CCCChhHcCCC-------ccccccCCCCCCCEEEEEecCCCCCChhhcCCCCCCcccccccccccCCC--cccCcceeee
Confidence 58999999997 36888889999999999999999999999999999999999999988764 7799999999
Q ss_pred ccchhhHhhhcccccccccCCCCCCCCCCccchhhhhhhccCCCCccccccCCCcceecCccccccccccccCCCCCCCC
Q 048642 198 RYFNRAYAAYVKQHNISVNFNNTARDHEGHGTHTLSTAGGNLVPGVNVFGMGNGTAKGGSPKARVAAYKVCWPQVSDGQC 277 (782)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~l~~~kv~~~~~~~g~~ 277 (782)
++|..++..... +..+++|++||||||||||||+..++.+.+|.+.+.++||||+|+|++||+|++. +|
T Consensus 72 ~~~~~~~~~~~~-------~~~~p~D~~GHGTHvAgi~AG~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~----g~ 140 (621)
T 3vta_A 72 RSYHIGRPISPG-------DVNGPRDTNGHGTHTASTAAGGLVSQANLYGLGLGTARGGVPLARIAAYKVCWND----GC 140 (621)
T ss_dssp EECCCSSSCCTT-------CCSSSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSCTTSEEEEEECEETT----EE
T ss_pred eecccCCccCCC-------CCCCCCCCCcCHHHHHHHHhCcCCCCccccccccccEEEECCCCEEEEEEeecCC----CC
Confidence 999766433322 3557899999999999999999988888888888889999999999999999987 58
Q ss_pred ChhHHHHHHHHhhhCCCeEEEEccCCC-CCCCCCCHHHHHHHHHHhcCcEEEEecCCCCCCCCcccCCCCcEEEEccccC
Q 048642 278 FDADILKGFDMAIHDGVDVISVSLGGD-PADYFNDGTAIGAFHAVKHGIVVVCSAANSGPELGTVTNVSPWIITVGASTL 356 (782)
Q Consensus 278 ~~~~i~~ai~~a~~~g~dVIn~SlG~~-~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVgas~~ 356 (782)
..+++++||++|+++|+||||||||+. ...+..+++++++++|+++||++|+||||+|+...++.+.+||+++|++++.
T Consensus 141 ~~~di~~a~~~a~~~g~dVin~SlG~~~~~~~~~~~~~~~~~~a~~~Gi~vv~aAGN~g~~~~t~~~~a~~~~~v~ast~ 220 (621)
T 3vta_A 141 SDTDILAAYDDAIADGVDIISLSVGGANPRHYFVDAIAIGSFHAVERGILTSNSAGNGGPNFFTTASLSPWLLSVAASTM 220 (621)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEECCCCCCGGGGGGCTHHHHHHHHHTTTCEEEEECCSCCSSTTCCCCCCTTSEEEEEECC
T ss_pred CHHHHHHHHHHHHHhCCCEEEecCCCCCCCCcCCcHHHHHHHHHHHCCCEEEEeCCCCCCCCcccCCCCCCceeEEEeec
Confidence 899999999999999999999999987 3456778999999999999999999999999999999999999999999999
Q ss_pred CccceeeEEecCCeEEeeeeccCCCCCCcccceEecccccccCCCcccccccCCCCCCCCCccceEEEEeeCCcchhhhh
Q 048642 357 DREFQNFVELRNGQRFKGTSLSKSLPNDTFYPLITGLQAKAANADDTAASLCKNGALDHEKVKGKILVCLRGDTARVDKG 436 (782)
Q Consensus 357 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~ 436 (782)
++.+...+.++++..+.+.++.... ...+++++..+.............|....+++.+++|||++|+++ +..+.
T Consensus 221 d~~~~~~~~~~~~~~~~~~s~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~gkivl~~~~---~~~~~ 295 (621)
T 3vta_A 221 DRKFVTQVQIGNGQSFQGVSINTFD--NQYYPLVSGRDIPNTGFDKSTSRFCTDKSVNPNLLKGKIVVCEAS---FGPHE 295 (621)
T ss_dssp SEEEEEEEEETTSCEEEEBCCCCSC--CEEECEEETTTSCCTTCCHHHHTTTCTTCSCGGGTTTSEEECSSC---CCHHH
T ss_pred cccceeeEEeccCceeeeeecccCC--CcccccccccccccccccccccccccccccccccccceEEEEecC---CChhH
Confidence 9999999999999999988876433 467788887777666666777889999999999999999999875 34566
Q ss_pred HHHHHcCceEEEEeccCCCCCccccCCCcccEEEEehhhHHHHHHHHhcCCCceEEEecCeeeccCCCCCccccccCCCC
Q 048642 437 RQAAVAGAVGMILCNDKSSGNEITADPHFLPASQITYKDGVKVLDYIKSSDNPMGYITSPSTYLNAKPSPFMASFSSAGP 516 (782)
Q Consensus 437 ~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp 516 (782)
.+....|+.+++++++... ..+.+.+|...++..++..+..|+.....+.+.+....+. .....+.++.||||||
T Consensus 296 ~~~~~~Ga~gvi~~~~~~~----~~~~~~lP~~~v~~~~g~~i~~~~~~~~~~~a~~~~~~~~-~~~~~~~va~FSSrGP 370 (621)
T 3vta_A 296 FFKSLDGAAGVLMTSNTRD----YADSYPLPSSVLDPNDLLATLRYIYSIRSPGATIFKSTTI-LNASAPVVVSFSSRGP 370 (621)
T ss_dssp HHHHHTTCSEEEEECSCCS----SCCCCSSSEEEECHHHHHHHHHHHHHHSSCCEEECCCEEE-ECTTCCCBCTTSCCCS
T ss_pred HhhhhcceeEEEEEecCCC----cccccccceEEECHHHHHHHHHHHhccCCcceEEecceEe-ccCCCCceeeecCCCC
Confidence 7788899999999987543 2356789999999999999999999999888888665544 3456789999999999
Q ss_pred CCCCCCCcCCeEEeCCceEEEeecCCCCCCCCCCCCCCcceeeeccccchhhHHHHHHHHHHhhCCCCCHHHHHHHHHhc
Q 048642 517 NKITPEILKPDITAPGVNIIAAFTGAIGATELPYDTRRIPYNIMSGTSMSCPHVAGVVGLLKTAHPDWSPSAIRSAIMTT 596 (782)
Q Consensus 517 ~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~sp~~ik~~L~~T 596 (782)
+...++++||||+|||++|+|+++....... +.....|..+||||||||||||+||||||+||+|+|++||++||+|
T Consensus 371 ~~~~~~ilKPDI~APG~~Ilsa~~~~~~~~~---~~~~~~y~~~SGTSMAaPhVAGvaALl~q~~P~~spa~IksaLmtT 447 (621)
T 3vta_A 371 NRATKDVIKPDISGPGVEILAAWPSVAPVGG---IRRNTLFNIISGTSMSCPHITGIATYVKTYNPTWSPAAIKSALMTT 447 (621)
T ss_dssp CTTCTTSCSCCEEEECSSEEEECCSSSCBTT---BCCCCSEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHT
T ss_pred CCCCCCeeccccccCCcceEeecCccccccC---cCCCCcceEecCccccchhhhhHHHHHHHHCCCCCHHHHHHHHHhc
Confidence 9877899999999999999999987543322 2345589999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCCCCCCCCcccccccCccccCCCCccccCCcchhhhhcccCCCCccceeeeccceecccCCC--CC
Q 048642 597 ARTRDNTANPMRDGSFKKATPFSYGSGHIRPNRAMDPGLVYDLSEDDYLDFLCSIGYNQTTIKRFFGTQYECSKSA--NL 674 (782)
Q Consensus 597 A~~~~~~g~~~~~~~~~~~~~~~~G~G~vd~~~A~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 674 (782)
|++++..+. ++.+++||+|+||+.+|++||||||.+.+||+.|||+++|++++++.+++....|+... ..
T Consensus 448 A~~~~~~~~--------~~~~~~~GaG~v~~~~A~~pGLvyd~~~~dy~~~lc~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (621)
T 3vta_A 448 ASPMNARFN--------PQAEFAYGSGHVNPLKAVRPGLVYDANESDYVKFLCGQGYNTQAVRRITGDYSACTSGNTGRV 519 (621)
T ss_dssp CBCCCTTTC--------TTTHHHHTTCBCCHHHHSCCSEECCCCGGGCC-----------------------------CG
T ss_pred CCcccccCC--------CCCchhcCCCccCHHHhcCCCeEeecccchhhhhhcccCCCchhheeeeccccccCCCCcCcc
Confidence 998876543 56789999999999999999999999999999999999999999999999988898754 57
Q ss_pred CCCCCCcEEee---ccCceEEEEEEEEecCC-CCeEEEEEeCCCCceEEEEecEEEEccCCcEEEEEEEEEecCCCCCCc
Q 048642 675 EDFNYPSISVP---MISGSVTLSRKLKNVGS-PSNYAASVREPLGISVSVEPKILAFKKIGEEKSFKVTLKPKWSGAPDN 750 (782)
Q Consensus 675 ~~~n~ps~~~~---~~~~~~t~~~tv~n~~~-~~ty~~~~~~~~g~~v~v~p~~~~~~~~~~~~~~~vt~~~~~~~~~~~ 750 (782)
.+||||||++. +...+++|+|||||+|. ..||+++++.|.|++|+|+|++|+|++.+|+++|+|||+. ...+.
T Consensus 520 ~~lN~pS~~v~~~~~~~~~~t~~rtvtnvg~~~~ty~~~v~~p~gv~v~V~P~~l~f~~~~~~~~~~vt~~~---~~~~~ 596 (621)
T 3vta_A 520 WDLNYPSFGLSVSPSQTFNQYFNRTLTSVAPQASTYRAMISAPQGLTISVNPNVLSFNGLGDRKSFTLTVRG---SIKGF 596 (621)
T ss_dssp GGSCCSSEEEECCSSCCEEEEEEEEEEECSSSCEEEEEEEECCSSEEEEEESSEEEECSTTCEEEEEEEEEE---CCCSS
T ss_pred cccccccEEEEccCCCceEEEEEEEEEccCCCCeEEEEEEECCCCcEEEEecCEEEEcCCCcEEEEEEEEEe---cCCCc
Confidence 79999999985 44478999999999999 9999999999999999999999999888999999999986 36788
Q ss_pred eEEEEEEEEcCCcEEEEEEEEEE
Q 048642 751 YRFGELTWTDGKHYVRSPIVVNQ 773 (782)
Q Consensus 751 ~~~G~i~~~~~~~~v~~P~~~~~ 773 (782)
|.||+|+|+|+.|.||+|++|+.
T Consensus 597 ~~~g~l~w~d~~h~Vr~Pi~v~~ 619 (621)
T 3vta_A 597 VVSASLVWSDGVHYVRSPITITS 619 (621)
T ss_dssp EEEEEEEEECSSCCCEEEEEEEC
T ss_pred eEEEEEEEEcCCEEEEeCEEEEE
Confidence 99999999999999999999874
No 3
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A*
Probab=100.00 E-value=1.1e-82 Score=771.47 Aligned_cols=544 Identities=22% Similarity=0.298 Sum_probs=428.6
Q ss_pred CCCccccCCCCCceEEEEecCCcCcCCCCccCCCCCCCCCCccccccCC----------CC-Ccccccccccccccchhh
Q 048642 135 SSSAWGKGRFGEDIIIANLDTGVWPESKSFSDEGYGPVPSRWKGTCQNS----------TK-EGVRCNRKLIGARYFNRA 203 (782)
Q Consensus 135 ~~~~w~~~~~G~gV~VaVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~----------~~-~~~~~~~ki~g~~~~~~~ 203 (782)
+..+|..+.+|+||+|||||||||++||+|.+. ..|++.|..+ .. .+.+||+|++++++|.++
T Consensus 6 ~~~~w~~~~~G~GV~VaVIDTGId~~Hp~f~~~------~~~~~~~~~~~~~~~~~~~~g~~~g~~~n~Kii~~~~~~~~ 79 (926)
T 1xf1_A 6 VKTLQEKAGKGAGTVVAVIDAGFDKNHEAWRLT------DKTKARYQSKEDLEKAKKEHGITYGEWVNDKVAYYHDYSKD 79 (926)
T ss_dssp CHHHHHHHCSCTTCEEEEEESCCTTCCCCCSCC------SCCCSSCCHHHHHHHHHHTTTCCCCBCCSSSCCEEEESCCC
T ss_pred cHHHHhccCCCCCcEEEEEecCCCCCCHhHcCC------CCCcccccchhhhcccccccCcccccccCcccceeeccccC
Confidence 457999999999999999999999999999853 4677666432 11 345899999999888642
Q ss_pred HhhhcccccccccCCCCCCCCCCccchhhhhhhccCCCCccccccCCCcceecCccccccccccccCCCCCCCCChhHHH
Q 048642 204 YAAYVKQHNISVNFNNTARDHEGHGTHTLSTAGGNLVPGVNVFGMGNGTAKGGSPKARVAAYKVCWPQVSDGQCFDADIL 283 (782)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~l~~~kv~~~~~~~g~~~~~~i~ 283 (782)
. ...|..||||||||||||+...+.+ +++.+.||||+|+|++||+|+..+ .++..++++
T Consensus 80 --------------~-~~~D~~gHGThVAgiiAg~~~~~~~----~~~~~~GvAP~A~l~~~kv~~~~g--~~~~~~~i~ 138 (926)
T 1xf1_A 80 --------------G-KTAVDQEHGTHVSGILSGNAPSETK----EPYRLEGAMPEAQLLLMRVEIVNG--LADYARNYA 138 (926)
T ss_dssp --------------S-CCCCSSTTTTHHHHSSCCCCCCCCS----CSCCTTTTCTTSEEEEEECCCCSC--HHHHHHHHH
T ss_pred --------------C-CCCCCCCcHHHHHHHHhCCCccCcc----cCCceEEECCCCEEEEEEeecCCC--CCCcHHHHH
Confidence 1 2228899999999999998654332 135679999999999999998761 124567899
Q ss_pred HHHHHhhhCCCeEEEEccCCCC--CCCCCCHHHHHHHHHHhcCcEEEEecCCCCCC-------------CCcccCC--CC
Q 048642 284 KGFDMAIHDGVDVISVSLGGDP--ADYFNDGTAIGAFHAVKHGIVVVCSAANSGPE-------------LGTVTNV--SP 346 (782)
Q Consensus 284 ~ai~~a~~~g~dVIn~SlG~~~--~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~-------------~~~~~~~--~p 346 (782)
+||++|+++|+||||||||... .....+++..++++|+++||+||+||||+|+. ..++.++ +|
T Consensus 139 ~Ai~~Ai~~gvdVIn~SlG~~~~~~~~~~~~~~~ai~~A~~~GilvV~AAGN~G~~g~~~~~~~~~~p~~~tv~~PA~~~ 218 (926)
T 1xf1_A 139 QAIRDAINLGAKVINMSFGNAALAYANLPDETKKAFDYAKSKGVSIVTSAGNDSSFGGKTRLPLADHPDYGVVGTPAAAD 218 (926)
T ss_dssp HHHHHHHHTTCEEEEECCSSCCCTTCCCCHHHHHHHHHHHHTTCEEEEECCSCCBTTCTTSCCBTTCCCCBCCCSCTTTC
T ss_pred HHHHHHHHhCCcEEEECCCCCCCCccccccHHHHHHHHHHhCCcEEEEeCCCCCCcCCccccccccCCCcceecCcccCC
Confidence 9999999999999999999873 33456778889999999999999999999963 2334444 79
Q ss_pred cEEEEccccCCccceeeEEe-cCCeEEeeeeccC-CCC-CCcccceEecccccccCCCcccccccCCCCCCCCCccceEE
Q 048642 347 WIITVGASTLDREFQNFVEL-RNGQRFKGTSLSK-SLP-NDTFYPLITGLQAKAANADDTAASLCKNGALDHEKVKGKIL 423 (782)
Q Consensus 347 ~vitVgas~~~~~~~~~~~~-~~~~~~~g~~~~~-~~~-~~~~~pl~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkiv 423 (782)
|+|+|||++.++.+...+.+ +++....+.++.. ..+ ....+|+++... .|.+..+ .+++||||
T Consensus 219 ~vitVgA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~------------g~~~~~~--~~v~Gkiv 284 (926)
T 1xf1_A 219 STLTVASYSPDKQLTETVRVKTADQQDKEMPVLSTNRFEPNKAYDYAYANR------------GTKEDDF--KDVKGKIA 284 (926)
T ss_dssp CSEEEEEEBCSEEEEEEEEEECTTSCEEEEEEEEESCCCTTCCEEEEECTT------------SCSTTTT--TTCTTSEE
T ss_pred ceEEEeccccccccccceEEEcCCCcceeeEEEecCCCCCCceEEEEECCC------------CCCccch--hhcCCeEE
Confidence 99999999999998888887 5554443433321 112 256789988532 3776666 68999999
Q ss_pred EEeeCCcchhhhhHHHHHcCceEEEEeccCCCCCcc-ccCCCcccEEEEehhhHHHHHHHHhcCCCceEEEecCeeeccC
Q 048642 424 VCLRGDTARVDKGRQAAVAGAVGMILCNDKSSGNEI-TADPHFLPASQITYKDGVKVLDYIKSSDNPMGYITSPSTYLNA 502 (782)
Q Consensus 424 l~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~-~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~ 502 (782)
||+|+.|.+.+|..+++++|+.++|++|+....... ......+|+.+|+.++|..|.+ .+..+.++.........
T Consensus 285 l~~rg~~~~~~k~~~~~~~Ga~gvi~~n~~~~~~~~~~~~~~~iP~~~i~~~~g~~l~~----~~~~ti~~~~~~~~~~~ 360 (926)
T 1xf1_A 285 LIERGDIDFKDKIAKAKKAGAVGVLIYDNQDKGFPIELPNVDQMPAAFISRKDGLLLKD----NPQKTITFNATPKVLPT 360 (926)
T ss_dssp EEECCSSCHHHHHHHHHHTTCSEEEEECSSTTCCCEECCCSTTCCEEEECHHHHHHHHH----CSSCEEEECSSCEEEEC
T ss_pred EEECCCCCHHHHHHHHHhCCCcEEEEEecCCCCcccccCccccccEEEEeHHHHHHHHh----CCceEEEecccceeccc
Confidence 999999999999999999999999999987543322 2345789999999999998874 44445555444434555
Q ss_pred CCCCccccccCCCCCCCCCCCcCCeEEeCCceEEEeecCCCCCCCCCCCCCCcceeeeccccchhhHHHHHHHHHHh---
Q 048642 503 KPSPFMASFSSAGPNKITPEILKPDITAPGVNIIAAFTGAIGATELPYDTRRIPYNIMSGTSMSCPHVAGVVGLLKT--- 579 (782)
Q Consensus 503 ~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q--- 579 (782)
...+.++.||||||+. ++++||||+|||++|+++++++ .|..+||||||||||||+||||+|
T Consensus 361 ~~~~~~a~FSSrGp~~--~~~lKPDI~APG~~I~sa~~~~-------------~y~~~SGTSMAaPhVAG~aALl~q~~k 425 (926)
T 1xf1_A 361 ASGTKLSRFSSWGLTA--DGNIKPDIAAPGQDILSSVANN-------------KYAKLSGTSMSAPLVAGIMGLLQKQYE 425 (926)
T ss_dssp SSCSBCCTTSCCCBCT--TSCBSCCEEEECCCEEESSSCS-------------SSCEEESCTTHHHHHHHHHHHHHHHHH
T ss_pred CCcceeccccCCCCCC--CCccCceEECCCCCEEeeccCC-------------cceecCccchhHHHHHHHHHHHHHHHh
Confidence 6678999999999996 8999999999999999999764 899999999999999999999964
Q ss_pred -hCCCCCHHH----HHHHHHhccccccCCCCCCCCCCCCCCCCCcccccccCccccCCCCccccCCcchhhhhcccCCCC
Q 048642 580 -AHPDWSPSA----IRSAIMTTARTRDNTANPMRDGSFKKATPFSYGSGHIRPNRAMDPGLVYDLSEDDYLDFLCSIGYN 654 (782)
Q Consensus 580 -~~p~~sp~~----ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~G~G~vd~~~A~~~~lv~~~~~~~~~~~~~~~~~~ 654 (782)
.||+|+|+| ||++||+||++++..+. ..++++++||+|+||+.+|+++.+ |||..+++
T Consensus 426 ~~~P~~sp~~~~~~Iks~L~~TA~~~~~~~~------~~~~~~~~~G~G~vn~~~A~~~~~-----------~l~~~~~~ 488 (926)
T 1xf1_A 426 TQYPDMTPSERLDLAKKVLMSSATALYDEDE------KAYFSPRQQGAGAVDAKKASAATM-----------YVTDKDNT 488 (926)
T ss_dssp HSSSSSHHHHHHHHHHHHHHHHSBCCEEGGG------TEECCHHHHTTCBCCHHHHHHCSE-----------EEEESSSS
T ss_pred ccCCCCCHHHHHHHHHHHHHhcCCCcccCCC------CccCChhccCCCccCHHHhcCCCe-----------EEEcCCCC
Confidence 599999997 99999999998754321 235678999999999999999854 56766654
Q ss_pred ccceeeeccceecccCCCCCCCCCCCcEEeeccCceEEEEEEEEecCC-C--CeEEEEEeC--CCCceEEEEecEEEEcc
Q 048642 655 QTTIKRFFGTQYECSKSANLEDFNYPSISVPMISGSVTLSRKLKNVGS-P--SNYAASVRE--PLGISVSVEPKILAFKK 729 (782)
Q Consensus 655 ~~~~~~~~~~~~~~~~~~~~~~~n~ps~~~~~~~~~~t~~~tv~n~~~-~--~ty~~~~~~--~~g~~v~v~p~~~~~~~ 729 (782)
.. +|.++++....+++|||+|+|+ . .+|++++.. +.+..++|+|..|.+..
T Consensus 489 ~~------------------------~i~l~~~~~~~~~~~tv~N~g~~~~~~~y~~~v~~~~~~~~~~~v~p~~l~~~~ 544 (926)
T 1xf1_A 489 SS------------------------KVHLNNVSDKFEVTVNVHNKSDKPQELYYQATVQTDKVDGKHFALAPKVLYETS 544 (926)
T ss_dssp CS------------------------CEEEEEECSEEEEEEEEEECSSSCEEEEEEEEEEEEEEETTEEEEEEEEEEECC
T ss_pred cc------------------------eeeccccCccEEEEEEEEEeCCCceeEEEEEEEEeccCCCceEEeccceeEecc
Confidence 32 3445554567899999999997 4 567777764 66888888887665544
Q ss_pred -------CCcEEEEEEEEEecC-------CCCCCceEEEEEEEE--cCCc-EEEEEEEEEEccchhh
Q 048642 730 -------IGEEKSFKVTLKPKW-------SGAPDNYRFGELTWT--DGKH-YVRSPIVVNQAQAEAE 779 (782)
Q Consensus 730 -------~~~~~~~~vt~~~~~-------~~~~~~~~~G~i~~~--~~~~-~v~~P~~~~~~~~~~~ 779 (782)
+||+++|+|||++.. .++.+.|+||+|+|+ ++.| .||+||+++.++|..+
T Consensus 545 ~~~vtv~ag~~~~~~vt~~~~~~~~~~~~~~~~~~~~~G~i~~~~~~~~~~~v~~P~~~~~g~~~~~ 611 (926)
T 1xf1_A 545 WQKITIPANSSKQVTVPIDASRFSKDLLAQMKNGYFLEGFVRFKQDPTKEELMSIPYIGFRGDFGNL 611 (926)
T ss_dssp CEEEEECTTEEEEEEEEEECHHHHHHHHHHSTTCEEEEEEEEEESSTTSCCCEEEEEEEEESCGGGS
T ss_pred CCeEEECCCCEEEEEEEEEcCccchhhcccccCCcEEEEEEEEEeCCCCCCEEEeeeEEEecCcccC
Confidence 499999999999751 134667899999999 4555 4999999999999864
No 4
>3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis}
Probab=100.00 E-value=4e-61 Score=550.24 Aligned_cols=366 Identities=31% Similarity=0.451 Sum_probs=289.2
Q ss_pred CCeEEEEeCCCCCCCCccccccccchhhHHHHHHHhhCCcccccccEeEEeccceeeEEEEcCHHHHHHH----------
Q 048642 30 KQSYVVYLGSHAHGPEVTTADLDRVTDSHHEFLGSFLGSTEKARDAIFYSYQNHINGFAATLEEEEAAEI---------- 99 (782)
Q Consensus 30 ~~~yiV~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~y~~~~ng~s~~~~~~~~~~L---------- 99 (782)
.-+|||+|++.... +...++++.+ ..++.++|. .|+||+++++.+++++|
T Consensus 35 ~~~~iV~~~~~~~~------------~~~~~~~~~~-------g~~v~~~~~-~~~g~~~~l~~~~~~~l~~~~~~~~~~ 94 (539)
T 3afg_A 35 EVSTIIMFDNQADK------------EKAVEILDFL-------GAKIKYNYH-IIPALAVKIKVKDLLIIAGLMDTGYFG 94 (539)
T ss_dssp EEEEEEEESSHHHH------------HHHHHHHHHH-------TCEEEEECS-SSSEEEEEEEHHHHHHHTTCSCCC---
T ss_pred ceEEEEEECCCCCH------------HHHHHHHHhc-------CCeEEEEee-eeeEEEEEeCHHHHHHHHhhccccccc
Confidence 35699999974331 2222333332 256889997 79999999999999999
Q ss_pred -hCCCCeEEEEeccccccccccccccccccc-CCcccCCCccccCCCCCceEEEEecCCcCcCCCCccCCCCCCCCCCcc
Q 048642 100 -AKHPDVVSIFPNKGKKLHTTRSWDFMLLEN-NGVIHSSSAWGKGRFGEDIIIANLDTGVWPESKSFSDEGYGPVPSRWK 177 (782)
Q Consensus 100 -~~~p~V~~V~~~~~~~~~~~~s~~~~g~~~-~~~~~~~~~w~~~~~G~gV~VaVIDtGid~~Hp~f~~~~~~~~~~~~~ 177 (782)
+++|+|++|++++.+++.... .++.. ..+..+..+|..+.+|+||+|||||||||++||+|.++
T Consensus 95 ~~~~~~V~~v~~d~~~~~~~~~----~~~~~~~~~~~~~~~~~~g~~G~gv~VaViDtGid~~Hpdl~~~---------- 160 (539)
T 3afg_A 95 NAQLSGVQFIQEDYVVKVAVET----EGLDESAAQVMATNMWNLGYDGSGITIGIIDTGIDASHPDLQGK---------- 160 (539)
T ss_dssp CCCCTTEEEEEECCEEECC---------------CCBCSCCBCCSCCCTTCEEEEEESBCCTTSGGGTTT----------
T ss_pred cccCCCeeEEEecccccccCcc----ccCCccccccCcHhHHhcCCCCCCcEEEEEecCCCCCChHHhCC----------
Confidence 899999999999988764321 11111 11223568999999999999999999999999999743
Q ss_pred ccccCCCCCcccccccccccccchhhHhhhcccccccccCCCCCCCCCCccchhhhhhhccCCCCccccccCCCcceecC
Q 048642 178 GTCQNSTKEGVRCNRKLIGARYFNRAYAAYVKQHNISVNFNNTARDHEGHGTHTLSTAGGNLVPGVNVFGMGNGTAKGGS 257 (782)
Q Consensus 178 g~~~~~~~~~~~~~~ki~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvA 257 (782)
+++.++|.++ ...+.|++||||||||||+|+..+ ..+.+.|||
T Consensus 161 ----------------i~~~~d~~~~--------------~~~~~D~~gHGThVAgiiag~~~~-------~~g~~~GvA 203 (539)
T 3afg_A 161 ----------------VIGWVDFVNG--------------KTTPYDDNGHGTHVASIAAGTGAA-------SNGKYKGMA 203 (539)
T ss_dssp ----------------EEEEEETTTC--------------CSSCCBSSSHHHHHHHHHHCCCGG-------GTTTTCCSC
T ss_pred ----------------EeeeEECCCC--------------CCCCCCCCCCHHHHHHHHhCcCcc-------CCCCEEEEC
Confidence 5555555432 235678999999999999997421 134468999
Q ss_pred ccccccccccccCCCCCCCCChhHHHHHHHHhhhC----CCeEEEEccCCCCCCCCCCHHHHHHHHHHhcCcEEEEecCC
Q 048642 258 PKARVAAYKVCWPQVSDGQCFDADILKGFDMAIHD----GVDVISVSLGGDPADYFNDGTAIGAFHAVKHGIVVVCSAAN 333 (782)
Q Consensus 258 P~A~l~~~kv~~~~~~~g~~~~~~i~~ai~~a~~~----g~dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN 333 (782)
|+|+|+.+|++++. |.+..+++++||+||+++ |++|||||||........+++..++.++.++|++||+||||
T Consensus 204 p~A~l~~~kv~~~~---g~~~~~~i~~ai~~a~~~~~~~g~~Vin~SlG~~~~~~~~~~l~~ai~~a~~~GvlvV~AAGN 280 (539)
T 3afg_A 204 PGAKLVGIKVLNGQ---GSGSISDIINGVDWAVQNKDKYGIKVINLSLGSSQSSDGTDSLSQAVNNAWDAGLVVVVAAGN 280 (539)
T ss_dssp TTCEEEEEECSCTT---SEEEHHHHHHHHHHHHHTHHHHTEEEEEECCCCCSCCCSCSHHHHHHHHHHHTTCEEEEECCS
T ss_pred CCCEEEEEEeecCC---CCcCHHHHHHHHHHHHhhhhhcCCcEEEeCCCCCCCCccchHHHHHHHHHHhcCCEEEEECCC
Confidence 99999999999876 467889999999999976 99999999998854456788999999999999999999999
Q ss_pred CCCCCCcc--cCCCCcEEEEccccCCccceeeEEecCCeEEeeeeccCCCCCCcccceEecccccccCCCcccccccCCC
Q 048642 334 SGPELGTV--TNVSPWIITVGASTLDREFQNFVELRNGQRFKGTSLSKSLPNDTFYPLITGLQAKAANADDTAASLCKNG 411 (782)
Q Consensus 334 ~g~~~~~~--~~~~p~vitVgas~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~c~~~ 411 (782)
+|+...++ +...+++|+|||++.
T Consensus 281 ~g~~~~~~~~Pa~~~~vitVgA~~~------------------------------------------------------- 305 (539)
T 3afg_A 281 SGPNKYTVGSPAAASKVITVGAVDK------------------------------------------------------- 305 (539)
T ss_dssp CCSSSSCCCTTTTCSSSEEEEEECT-------------------------------------------------------
T ss_pred CCCCCCcccCCccCCceEEEeeecC-------------------------------------------------------
Confidence 99765443 446789999998542
Q ss_pred CCCCCCccceEEEEeeCCcchhhhhHHHHHcCceEEEEeccCCCCCccccCCCcccEEEEehhhHHHHHHHHhcCCCceE
Q 048642 412 ALDHEKVKGKILVCLRGDTARVDKGRQAAVAGAVGMILCNDKSSGNEITADPHFLPASQITYKDGVKVLDYIKSSDNPMG 491 (782)
Q Consensus 412 ~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~ 491 (782)
T Consensus 306 -------------------------------------------------------------------------------- 305 (539)
T 3afg_A 306 -------------------------------------------------------------------------------- 305 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEecCeeeccCCCCCccccccCCCCCCCCCCCcCCeEEeCCceEEEeecCCCCCCCCCCCCCCcceeeeccccchhhHHH
Q 048642 492 YITSPSTYLNAKPSPFMASFSSAGPNKITPEILKPDITAPGVNIIAAFTGAIGATELPYDTRRIPYNIMSGTSMSCPHVA 571 (782)
Q Consensus 492 ~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VA 571 (782)
.+.++.||||||+. ++++||||+|||++|+++++..... .+.....|..++||||||||||
T Consensus 306 -------------~~~~a~fSs~Gp~~--~~~~kpdi~APG~~I~s~~~~~~~~----~~~~~~~y~~~sGTSmAaP~VA 366 (539)
T 3afg_A 306 -------------YDVITDFSSRGPTA--DNRLKPEVVAPGNWIIAARASGTSM----GQPINDYYTAAPGTAMATPHVA 366 (539)
T ss_dssp -------------TSCBCSSSCCCCCT--TCBCCCSEEEECSSEEEECCTTCCC----SEECSSSEEEECSHHHHHHHHH
T ss_pred -------------CcccccccCCCCCC--CCCCcccEecCcCCEEeeccCCCCC----CCCCcccccccCchHHHHHHHH
Confidence 13688999999987 8999999999999999999753210 1111236999999999999999
Q ss_pred HHHHHHHhhCCCCCHHHHHHHHHhccccccCCCCCCCCCCCCCCCCCcccccccCccccCCC
Q 048642 572 GVVGLLKTAHPDWSPSAIRSAIMTTARTRDNTANPMRDGSFKKATPFSYGSGHIRPNRAMDP 633 (782)
Q Consensus 572 G~aALl~q~~p~~sp~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~G~G~vd~~~A~~~ 633 (782)
|++|||+|++|+|+|++||++|++||+++...+ .+++.||+|+||+.+|++.
T Consensus 367 G~aALl~~~~p~~s~~~vk~~L~~tA~~~~~~~----------~~~~~~G~G~vn~~~Al~~ 418 (539)
T 3afg_A 367 GIAALLLQAHPSWTPDKVKTALIETADIVKPDE----------IADIAYGAGRVNAYKAAYY 418 (539)
T ss_dssp HHHHHHHHHCTTCCHHHHHHHHHHHSBCSSGGG----------CSBTTTBTCBCCHHHHHTG
T ss_pred HHHHHHHHHCCCCCHHHHHHHHHhhCccCCCCC----------CCccCccCCccCHHHHhhh
Confidence 999999999999999999999999999875322 2467899999999999985
No 5
>2z2z_A TK-subtilisin precursor; thermococcus kodakaraensis, hydrolase; 1.87A {Thermococcus kodakarensis} PDB: 2e1p_A 2zwp_A 2zwo_A
Probab=100.00 E-value=2.2e-59 Score=519.36 Aligned_cols=345 Identities=26% Similarity=0.330 Sum_probs=277.5
Q ss_pred CCeEEEEeCCCCCCCCccccccccchhhHHHHHHHhhCCcccccccEeEEeccceeeEEEEcCHHHHHHHhCCCCeEEEE
Q 048642 30 KQSYVVYLGSHAHGPEVTTADLDRVTDSHHEFLGSFLGSTEKARDAIFYSYQNHINGFAATLEEEEAAEIAKHPDVVSIF 109 (782)
Q Consensus 30 ~~~yiV~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~y~~~~ng~s~~~~~~~~~~L~~~p~V~~V~ 109 (782)
+.+|||.||+.... .++++. ...++.++|. .+++|+++++++++++|+++|+|++|+
T Consensus 2 ~~~~iV~~~~~~~~---------------~~~~~~-------~g~~v~~~~~-~~~~~~~~~~~~~~~~L~~~p~V~~v~ 58 (395)
T 2z2z_A 2 TIRVIVSVDKAKFN---------------PHEVLG-------IGGHIVYQFK-LIPAVVVDVPANAVGKLKKMPGVEKVE 58 (395)
T ss_dssp EEEEEEEECTTTCC---------------HHHHHH-------TTCEEEEECS-SSSEEEEEEEGGGHHHHHTSTTEEEEE
T ss_pred cEEEEEEECCCccH---------------HHHHHH-------cCCEEEEEec-cCCEEEEEECHHHHHHHHcCCCceEEE
Confidence 46899999986432 122332 2356889998 699999999999999999999999999
Q ss_pred eccccccccccc-----------ccccccccCCcccCCCccccCCCCCc--eEEEEecCCcCcCCCCccCCCCCCCCCCc
Q 048642 110 PNKGKKLHTTRS-----------WDFMLLENNGVIHSSSAWGKGRFGED--IIIANLDTGVWPESKSFSDEGYGPVPSRW 176 (782)
Q Consensus 110 ~~~~~~~~~~~s-----------~~~~g~~~~~~~~~~~~w~~~~~G~g--V~VaVIDtGid~~Hp~f~~~~~~~~~~~~ 176 (782)
+++.+++..... ...|++..++ ...+|..+ +|+| |+|||||||||++||+|.++
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~i~---~~~~w~~~-~G~g~~v~VaViDtGid~~Hp~l~~~--------- 125 (395)
T 2z2z_A 59 FDHQAVLLGKPSWLGGGSTQPAQTIPWGIERVK---APSVWSIT-DGSVSVIQVAVLDTGVDYDHPDLAAN--------- 125 (395)
T ss_dssp ECCEEEECCEECC------CCSCCCCHHHHHTT---CGGGGGTC-SSCCTTCEEEEEESCBCTTCTTTGGG---------
T ss_pred EeeeecccCCCCcccccccCccccCCcchhhcC---HHHHHhhc-CCCCCcEEEEEEcCCCCCCChhHhhc---------
Confidence 999887653221 1234444332 56789988 9999 99999999999999999753
Q ss_pred cccccCCCCCcccccccccccccchhhHhhhcccccccccCCCCCCCCCCccchhhhhhhccCCCCccccccCCCcceec
Q 048642 177 KGTCQNSTKEGVRCNRKLIGARYFNRAYAAYVKQHNISVNFNNTARDHEGHGTHTLSTAGGNLVPGVNVFGMGNGTAKGG 256 (782)
Q Consensus 177 ~g~~~~~~~~~~~~~~ki~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~Gv 256 (782)
+...++|..+.... +..+..|..||||||||||+|.. ++..+.||
T Consensus 126 -----------------~~~~~~~~~~~~~~---------~~~~~~d~~gHGT~vAgiia~~~---------n~~g~~Gv 170 (395)
T 2z2z_A 126 -----------------IAWCVSTLRGKVST---------KLRDCADQNGHGTHVIGTIAALN---------NDIGVVGV 170 (395)
T ss_dssp -----------------EEEEEECGGGCCBC---------CHHHHBCSSSHHHHHHHHHHCCC---------SSSSCCCS
T ss_pred -----------------cccCccccCCcccC---------CCCCCCCCCCCHHHHHHHHHeec---------CCCceEEE
Confidence 33333343221000 01124678999999999999973 12235899
Q ss_pred CccccccccccccCCCCCCCCChhHHHHHHHHhhhC--------------------CCeEEEEccCCCCCCCCCCHHHHH
Q 048642 257 SPKARVAAYKVCWPQVSDGQCFDADILKGFDMAIHD--------------------GVDVISVSLGGDPADYFNDGTAIG 316 (782)
Q Consensus 257 AP~A~l~~~kv~~~~~~~g~~~~~~i~~ai~~a~~~--------------------g~dVIn~SlG~~~~~~~~~~~~~a 316 (782)
||+|+|+.+|+++.. |.+..+++++||+||+++ +++|||||||... ....+..+
T Consensus 171 Ap~a~l~~~kv~~~~---g~~~~~~i~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~Vin~S~G~~~---~~~~~~~a 244 (395)
T 2z2z_A 171 APGVQIYSVRVLDAR---GSGSYSDIAIGIEQAILGPDGVADKDGDGIIAGDPDDDAAEVISMSLGGPA---DDSYLYDM 244 (395)
T ss_dssp STTCEEEEEECSCTT---SEEEHHHHHHHHHHHHHTTTTCSSTTCSSCCTTCTTSCCCSEEEECEEBSC---CCHHHHHH
T ss_pred CCCCEEEEEEEecCC---CCccHHHHHHHHHHHHhCccccccccccccccccccCCCCeEEEecCCCCC---CCHHHHHH
Confidence 999999999999876 467889999999999988 9999999999872 24567778
Q ss_pred HHHHHhcCcEEEEecCCCCCCCCcccCCCCcEEEEccccCCccceeeEEecCCeEEeeeeccCCCCCCcccceEeccccc
Q 048642 317 AFHAVKHGIVVVCSAANSGPELGTVTNVSPWIITVGASTLDREFQNFVELRNGQRFKGTSLSKSLPNDTFYPLITGLQAK 396 (782)
Q Consensus 317 ~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVgas~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~pl~~~~~~~ 396 (782)
+.++.++|++||+||||+|.....++...+++|+|||++.
T Consensus 245 i~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~---------------------------------------- 284 (395)
T 2z2z_A 245 IIQAYNAGIVIVAASGNEGAPSPSYPAAYPEVIAVGAIDS---------------------------------------- 284 (395)
T ss_dssp HHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEECT----------------------------------------
T ss_pred HHHHHHCCCEEEEECCCCCCCCCCCccCCCCEEEEEEecC----------------------------------------
Confidence 8889999999999999999877777778899999998542
Q ss_pred ccCCCcccccccCCCCCCCCCccceEEEEeeCCcchhhhhHHHHHcCceEEEEeccCCCCCccccCCCcccEEEEehhhH
Q 048642 397 AANADDTAASLCKNGALDHEKVKGKILVCLRGDTARVDKGRQAAVAGAVGMILCNDKSSGNEITADPHFLPASQITYKDG 476 (782)
Q Consensus 397 ~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~g 476 (782)
T Consensus 285 -------------------------------------------------------------------------------- 284 (395)
T 2z2z_A 285 -------------------------------------------------------------------------------- 284 (395)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhcCCCceEEEecCeeeccCCCCCccccccCCCCCCCCCCCcCCeEEeCCceEEEeecCCCCCCCCCCCCCCcc
Q 048642 477 VKVLDYIKSSDNPMGYITSPSTYLNAKPSPFMASFSSAGPNKITPEILKPDITAPGVNIIAAFTGAIGATELPYDTRRIP 556 (782)
Q Consensus 477 ~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~ 556 (782)
.+.++.||+||| +|+|||++|+++++.+ .
T Consensus 285 ----------------------------~~~~a~fS~~G~----------~v~APG~~i~s~~~~~-------------~ 313 (395)
T 2z2z_A 285 ----------------------------NDNIASFSNRQP----------EVSAPGVDILSTYPDD-------------S 313 (395)
T ss_dssp ----------------------------TSCBCTTSCSSC----------SEEEECSSEEEEETTT-------------E
T ss_pred ----------------------------CCCCCcccCCCC----------CEEeCCCCeeeecCCC-------------c
Confidence 247889999997 6799999999999864 8
Q ss_pred eeeeccccchhhHHHHHHHHHHhhCC-------------CCCHHHHHHHHHhccccccCCCCCCCCCCCCCCCCCccccc
Q 048642 557 YNIMSGTSMSCPHVAGVVGLLKTAHP-------------DWSPSAIRSAIMTTARTRDNTANPMRDGSFKKATPFSYGSG 623 (782)
Q Consensus 557 y~~~sGTSmAaP~VAG~aALl~q~~p-------------~~sp~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~G~G 623 (782)
|..++|||||||||||++|||+|++| .|++.+||++|++||+++... ..++.||||
T Consensus 314 y~~~sGTS~AaP~VaG~aAll~~~~p~~~~~~~~~~~~~~ls~~~v~~~L~~tA~~~~~~-----------g~~~~~G~G 382 (395)
T 2z2z_A 314 YETLMGTAMATPHVSGVVALIQAAYYQKYGKILPVGTFDDISKNTVRGILHITADDLGPT-----------GWDADYGYG 382 (395)
T ss_dssp EEEEESHHHHHHHHHHHHHHHHHHHHHHHSSCCCCCCTTCCSSSSHHHHHHHHSBCCSSS-----------SSBTTTBTC
T ss_pred eEecCCHHHHHHHHHHHHHHHHHhCccccccccccccccCCCHHHHHHHHHhhccccCCC-----------CCCCCccCc
Confidence 99999999999999999999999999 999999999999999987532 236789999
Q ss_pred ccCccccCCC
Q 048642 624 HIRPNRAMDP 633 (782)
Q Consensus 624 ~vd~~~A~~~ 633 (782)
+||+.+|++.
T Consensus 383 ~vd~~~A~~~ 392 (395)
T 2z2z_A 383 VVRAALAVQA 392 (395)
T ss_dssp BCCHHHHHHH
T ss_pred eeCHHHHHHH
Confidence 9999999874
No 6
>3t41_A Epidermin leader peptide processing serine protea; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Staphylococcus aureus} PDB: 3qfh_A
Probab=100.00 E-value=5.4e-56 Score=504.82 Aligned_cols=336 Identities=20% Similarity=0.262 Sum_probs=263.6
Q ss_pred ccEeEEeccceeeEEEEcCHHHHHHHhC-CCCeEEEEecccccccccccc----------cccccccCCcccCCCccccC
Q 048642 74 DAIFYSYQNHINGFAATLEEEEAAEIAK-HPDVVSIFPNKGKKLHTTRSW----------DFMLLENNGVIHSSSAWGKG 142 (782)
Q Consensus 74 ~~i~~~y~~~~ng~s~~~~~~~~~~L~~-~p~V~~V~~~~~~~~~~~~s~----------~~~g~~~~~~~~~~~~w~~~ 142 (782)
.++.+.|. .|++|+++++++++++|++ +|+|++|++++.+++...... ..|++..+.. ...+|..+
T Consensus 66 ~~v~~~~~-~~~~~~~~~~~~~~~~L~~~~p~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~w~l~~i~~--~~~~~~~~ 142 (471)
T 3t41_A 66 LNVVYNIP-ELHVAQIKMTKMHANALANYKNDIKYINATCSTCITSEKTIDRTSNESLFSRQWDMNKITN--NGASYDDL 142 (471)
T ss_dssp CEEEEEEG-GGTEEEEEECHHHHHHHHTCTTTEEEEEECCSSCBCCCCCCCC---CCSCCCCHHHHTTTT--TTGGGGGC
T ss_pred CEEEEecC-CccEEEEEeCHHHHHHHHhcCCCCcEEEecceeccccccccccCCCCccccccccHhhccC--cHHHHhcc
Confidence 45778886 6999999999999999999 999999999988877543221 1234443321 23689999
Q ss_pred CCCCceEEEEecCCcCcCCCCccCCCCCCCCCCccccccCCCCCcccccccccccccchhhHhhhcccccccccCCCCCC
Q 048642 143 RFGEDIIIANLDTGVWPESKSFSDEGYGPVPSRWKGTCQNSTKEGVRCNRKLIGARYFNRAYAAYVKQHNISVNFNNTAR 222 (782)
Q Consensus 143 ~~G~gV~VaVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~~~ki~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (782)
.+|+||+|||||||||++||+|.++ .|.+. ..++....|.... .+... +...+.
T Consensus 143 ~~G~gv~VaViDtGid~~Hp~~~~~-------~~~~~------------~~~~~~~~~~~~~------~~~~~-~~~~~~ 196 (471)
T 3t41_A 143 PKHANTKIAIIDTGVMKNHDDLKNN-------FSTDS------------KNLVPLNGFRGTE------PEETG-DVHDVN 196 (471)
T ss_dssp CSSCCCCEEEEESCCCTTCTTTTTT-------BCTTC------------EECCCTTCGGGCC------TTCCC-CTTCCC
T ss_pred CCCCCcEEEEEeCCCCCCChhHhcC-------cccCC------------cccccCCCccCCC------cccCC-CCCCCc
Confidence 9999999999999999999999864 11110 1111111121110 00000 234567
Q ss_pred CCCCccchhhhhhhccCCCCccccccCCCcceecCccccccccccccCCCCCCCCChhHHHHHHHHhhhCCCeEEEEccC
Q 048642 223 DHEGHGTHTLSTAGGNLVPGVNVFGMGNGTAKGGSPKARVAAYKVCWPQVSDGQCFDADILKGFDMAIHDGVDVISVSLG 302 (782)
Q Consensus 223 d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~l~~~kv~~~~~~~g~~~~~~i~~ai~~a~~~g~dVIn~SlG 302 (782)
|..||||||||||+|+. .+.||||+|+|+.+|++++. .+..+++++||++|++++++|||||||
T Consensus 197 d~~gHGT~vAgiiaa~g------------~~~GvAp~a~l~~~kv~~~~----~~~~~~i~~ai~~a~~~g~~Vin~S~G 260 (471)
T 3t41_A 197 DRKGHGTMVSGQTSANG------------KLIGVAPNNKFTMYRVFGSK----KTELLWVSKAIVQAANDGNQVINISVG 260 (471)
T ss_dssp CSSSHHHHHHHHHHCBS------------SSBCSSTTSCEEEEECCSSS----CCCHHHHHHHHHHHHHTTCSEEEECCC
T ss_pred CCCCccchhhheeecCC------------ceeEECCCCeEEEEEeccCC----CCcHHHHHHHHHHHHhCCCCEEEeCCC
Confidence 89999999999999863 25899999999999999864 688999999999999999999999999
Q ss_pred CCC-CC------------CCCCHHHHHHHHHHhcCcEEEEecCCCCCCCCc------------------ccCCCCcEEEE
Q 048642 303 GDP-AD------------YFNDGTAIGAFHAVKHGIVVVCSAANSGPELGT------------------VTNVSPWIITV 351 (782)
Q Consensus 303 ~~~-~~------------~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~------------------~~~~~p~vitV 351 (782)
... .. ...+.+..++..+.++|++||+||||+|..... .+...+++|+|
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~ai~~a~~~Gi~vV~AAGN~g~~~~~~~~~~~~~~~~~~~~~~~~Pa~~~~vitV 340 (471)
T 3t41_A 261 SYIILDKNDHQTFRKDEKVEYDALQKAINYAKKKKSIVVAAAGNDGIDVNDKQKLKLQREYQGNGEVKDVPASMDNVVTV 340 (471)
T ss_dssp EEEEECTTCCCSEESSCHHHHHHHHHHHHHHHHTTCEEEEECCSSCCBTTCHHHHHHTTTCCSSSEEEEETTTSTTEEEE
T ss_pred CCCCCccccccccccccchhHHHHHHHHHHHHhCCCEEEEEcCCCCcCCCcccccccccccccCCceeeccccCCCeEEE
Confidence 741 00 123457778888999999999999999976432 44567899999
Q ss_pred ccccCCccceeeEEecCCeEEeeeeccCCCCCCcccceEecccccccCCCcccccccCCCCCCCCCccceEEEEeeCCcc
Q 048642 352 GASTLDREFQNFVELRNGQRFKGTSLSKSLPNDTFYPLITGLQAKAANADDTAASLCKNGALDHEKVKGKILVCLRGDTA 431 (782)
Q Consensus 352 gas~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~ 431 (782)
||++.+
T Consensus 341 gA~~~~-------------------------------------------------------------------------- 346 (471)
T 3t41_A 341 GSTDQK-------------------------------------------------------------------------- 346 (471)
T ss_dssp EEECTT--------------------------------------------------------------------------
T ss_pred EeeCCC--------------------------------------------------------------------------
Confidence 985431
Q ss_pred hhhhhHHHHHcCceEEEEeccCCCCCccccCCCcccEEEEehhhHHHHHHHHhcCCCceEEEecCeeeccCCCCCccccc
Q 048642 432 RVDKGRQAAVAGAVGMILCNDKSSGNEITADPHFLPASQITYKDGVKVLDYIKSSDNPMGYITSPSTYLNAKPSPFMASF 511 (782)
Q Consensus 432 ~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~f 511 (782)
+.++.|
T Consensus 347 --------------------------------------------------------------------------~~~a~f 352 (471)
T 3t41_A 347 --------------------------------------------------------------------------SNLSEF 352 (471)
T ss_dssp --------------------------------------------------------------------------SSBCTT
T ss_pred --------------------------------------------------------------------------CCCCCc
Confidence 478899
Q ss_pred cCCCCCCCCCCCcCCeEEeCCce----------------------EEEeecCCCCCCCCCCCCCCcceeeeccccchhhH
Q 048642 512 SSAGPNKITPEILKPDITAPGVN----------------------IIAAFTGAIGATELPYDTRRIPYNIMSGTSMSCPH 569 (782)
Q Consensus 512 Ss~Gp~~~~~~~~KPDI~APG~~----------------------I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~ 569 (782)
|++||+. |||+|||++ |+++++.+ .|..++||||||||
T Consensus 353 S~~G~~~-------~di~APG~~i~~~~~~g~~~~~~~~~~~~~~i~s~~~~~-------------~~~~~sGTS~AaP~ 412 (471)
T 3t41_A 353 SNFGMNY-------TDIAAPGGSFAYLNQFGVDKWMNEGYMHKENILTTANNG-------------RYIYQAGTALATPK 412 (471)
T ss_dssp CCBCTTT-------CCEEEECCCCHHHHHHHHHHHHHTTTHHHHSEEEECTTS-------------SEEEECSHHHHHHH
T ss_pred cCCCCCC-------CeEEecCCCcccccccccccccccccccCceeEecCCCC-------------CEEeecchHHHHHH
Confidence 9999963 599999987 89988764 89999999999999
Q ss_pred HHHHHHHHHhhCC-CCCHHHHHHHHHhccccccCCCCCCCCCCCCCCCCCcccccccCccccCCCC
Q 048642 570 VAGVVGLLKTAHP-DWSPSAIRSAIMTTARTRDNTANPMRDGSFKKATPFSYGSGHIRPNRAMDPG 634 (782)
Q Consensus 570 VAG~aALl~q~~p-~~sp~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~G~G~vd~~~A~~~~ 634 (782)
|||++|||+|++| .++|++||++|++||.+... .++..||||+||+.+|++..
T Consensus 413 VAG~aAll~~~~p~~~~~~~v~~~L~~tA~~~~~------------~~~~~~G~G~vd~~~Al~~a 466 (471)
T 3t41_A 413 VSGALALIIDKYHLEKHPDKAIELLYQHGTSKNN------------KPFSRYGHGELDVYKALNVA 466 (471)
T ss_dssp HHHHHHHHHHHHTCTTCHHHHHHHHHHHSBCCSC------------CCHHHHTTCBBCHHHHTTTT
T ss_pred HHHHHHHHHHhccCCCCHHHHHHHHHHhCCCCCC------------CCcCccccChhCHHHHHHHH
Confidence 9999999999999 89999999999999987632 35679999999999999853
No 7
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=100.00 E-value=5.1e-56 Score=499.36 Aligned_cols=389 Identities=19% Similarity=0.243 Sum_probs=280.0
Q ss_pred cccccCCcccCCCccccCCCCCceEEEEecCCcCcCCCCccCCCCCCCCCCccccccCCCCCcccccccccccccchhhH
Q 048642 125 MLLENNGVIHSSSAWGKGRFGEDIIIANLDTGVWPESKSFSDEGYGPVPSRWKGTCQNSTKEGVRCNRKLIGARYFNRAY 204 (782)
Q Consensus 125 ~g~~~~~~~~~~~~w~~~~~G~gV~VaVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~~~ki~g~~~~~~~~ 204 (782)
|++..++ +..+|..+ |+||+|||||||||++||+|.++ ++..+++...
T Consensus 6 W~l~~i~---~~~~w~~~--g~gv~VaViDtGvd~~Hp~l~~~--------------------------~~~~~~~~~~- 53 (441)
T 1y9z_A 6 WGQTFVG---ATVLSDSQ--AGNRTICIIDSGYDRSHNDLNAN--------------------------NVTGTNNSGT- 53 (441)
T ss_dssp HHHHHTT---CSSSCCTT--GGGCEEEEEESCCCTTSTTTTTS--------------------------EEEECCCTTS-
T ss_pred CChhhcC---hhhhhhcC--CCCcEEEEEcCCCCCCChhHhcC--------------------------cccCcccCCC-
Confidence 4554443 57889865 77999999999999999999753 1111111100
Q ss_pred hhhcccccccccCCCCCCCCCCccchhhhhhhccCCCCccccccCCCcceecCccc--cccccccccCCCCCCCCChhHH
Q 048642 205 AAYVKQHNISVNFNNTARDHEGHGTHTLSTAGGNLVPGVNVFGMGNGTAKGGSPKA--RVAAYKVCWPQVSDGQCFDADI 282 (782)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A--~l~~~kv~~~~~~~g~~~~~~i 282 (782)
+ +...+.|..||||||||||+|... +..+.||||+| +|+.+|+++.. |.+..+++
T Consensus 54 ----~-------~~~~~~d~~gHGT~vAgiia~~~~---------~~g~~GvAP~a~~~l~~~kv~~~~---g~~~~~~~ 110 (441)
T 1y9z_A 54 ----G-------NWYQPGNNNAHGTHVAGTIAAIAN---------NEGVVGVMPNQNANIHIVKVFNEA---GWGYSSSL 110 (441)
T ss_dssp ----C-------CTTCCCSSCCHHHHHHHHHHCCCS---------SSBCCCSSCSSCSEEEEEECEETT---EECCSSCH
T ss_pred ----C-------CCCCCCCCCCcHHHHHHHHhcccC---------CCCceEecCCCCCEEEEEEEeCCC---CCcCHHHH
Confidence 0 123567889999999999999752 22358999995 89999999876 45788899
Q ss_pred HHHHHHhhhC-CCeEEEEccCCCCCCCCCCHHHHHHHHHHhcCcEEEEecCCCCCCCCcccCCCCcEEEEccccCCccce
Q 048642 283 LKGFDMAIHD-GVDVISVSLGGDPADYFNDGTAIGAFHAVKHGIVVVCSAANSGPELGTVTNVSPWIITVGASTLDREFQ 361 (782)
Q Consensus 283 ~~ai~~a~~~-g~dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVgas~~~~~~~ 361 (782)
++||+||+++ |++|||||||... ....+..++.++.++|++||+||||+|.....++...+++|+|||++.+....
T Consensus 111 ~~ai~~a~~~~g~~Vin~S~G~~~---~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~VgA~~~~~~~~ 187 (441)
T 1y9z_A 111 VAAIDTCVNSGGANVVTMSLGGSG---STTTERNALNTHYNNGVLLIAAAGNAGDSSYSYPASYDSVMSVAAVDSNLDHA 187 (441)
T ss_dssp HHHHHHHHHTTCCSEEEECCCBSC---CBHHHHHHHHHHHHTTCEEEEECCSSSSSBCCBTTTSTTEEEEEEECTTCCBC
T ss_pred HHHHHHHHHhcCCcEEEeCCCCCC---CCHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCCCCCCCeEEEEEECCCCCCC
Confidence 9999999999 9999999999873 23456778888999999999999999987777777889999999998775433
Q ss_pred eeEEecCCe-----------------------EEeeeeccCCCC-CC-cccc--eEecccccccCCCcccccccCCC--C
Q 048642 362 NFVELRNGQ-----------------------RFKGTSLSKSLP-ND-TFYP--LITGLQAKAANADDTAASLCKNG--A 412 (782)
Q Consensus 362 ~~~~~~~~~-----------------------~~~g~~~~~~~~-~~-~~~p--l~~~~~~~~~~~~~~~~~~c~~~--~ 412 (782)
.+...+... .+.|.+++.... +. ..++ +.+..... ..........|... .
T Consensus 188 ~~S~~g~~vdv~ApG~~i~s~~~~g~g~~~~~~~~G~s~~~~~~~p~~~~~~~~~~~~~~~~-~g~~~~~~~~C~~~~~~ 266 (441)
T 1y9z_A 188 AFSQYTDQVEISGPGEAILSTVTVGEGRLADITIGGQSYFSNGVVPHNRLTPSGTSYAPAPI-NASATGALAECTVNGTS 266 (441)
T ss_dssp TTSCCCTTEEEEEECSSEEEECSTTCEEEEEEEETTEECGGGCCEECEEEEEETTEEEECCC-CCEEEEEEEEEEEETTE
T ss_pred ccccCCCceEEEeccCCeeccccCCCcccceeecccccccccccCcccccccCCcccccccc-ccccccchhcccccccc
Confidence 222222111 122222221110 00 0000 01100000 00011223457643 5
Q ss_pred CCCCCccceEEEEeeCCc-----chhhhhHHHHHcCceEEEEeccCCCCCc------cccCCCcccEEEEehhhHHHHHH
Q 048642 413 LDHEKVKGKILVCLRGDT-----ARVDKGRQAAVAGAVGMILCNDKSSGNE------ITADPHFLPASQITYKDGVKVLD 481 (782)
Q Consensus 413 ~~~~~~~gkivl~~~g~~-----~~~~~~~~~~~~Ga~g~i~~n~~~~~~~------~~~~~~~~p~~~i~~~~g~~l~~ 481 (782)
++..+++|||++|+|+.+ .+.+|..+++++|+.++|++|+...... .......+|.++++.++|+.|++
T Consensus 267 ~~~~~~~gkivl~~rg~~~~~~~~~~~~~~~~~~aGa~gvii~~~~~~~g~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~ 346 (441)
T 1y9z_A 267 FSCGNMANKICLVERVGNQGSSYPEINSTKACKTAGAKGIIVYSNSALPGLQNPFLVDANSDITVPSVSVDRATGLALKA 346 (441)
T ss_dssp EECCCCTTEEEEEECCSCSSSSCTHHHHHHHHHHTTCSEEEEECCTTSCSCCCCEEECTTCCCCSCEEEECHHHHHHHHT
T ss_pred ccCCCccccEEEEeccccCcccccHHHHHHHHHhcCCeEEEEEeCCCccccccccccccccCccccEEEEeHHHHHHHHH
Confidence 678899999999999876 6789999999999999999998652111 11234679999999999999987
Q ss_pred HHhcCCCceEEEecCeeeccCCCCCccccccCCCCCCCCCCCcCCeEEeCCceEEEeecCCCCCCCCCCCCCCcceeeec
Q 048642 482 YIKSSDNPMGYITSPSTYLNAKPSPFMASFSSAGPNKITPEILKPDITAPGVNIIAAFTGAIGATELPYDTRRIPYNIMS 561 (782)
Q Consensus 482 ~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~s 561 (782)
++.+. . .+ ++... ..|..++
T Consensus 347 ~~~~~----~-----------------------------------t~--------~~~~~-------------~~y~~~s 366 (441)
T 1y9z_A 347 KLGQS----T-----------------------------------TV--------SNQGN-------------QDYEYYN 366 (441)
T ss_dssp TTTSE----E-----------------------------------EE--------EEEEE-------------ESEEEEC
T ss_pred HhcCC----c-----------------------------------cc--------ccccC-------------CCceeec
Confidence 66321 0 11 11111 2899999
Q ss_pred cccchhhHHHHHHHHHHhhCCCCCHHHHHHHHHhccccccCCCCCCCCCCCCCCCCCcccccccCccccCCCCccccCCc
Q 048642 562 GTSMSCPHVAGVVGLLKTAHPDWSPSAIRSAIMTTARTRDNTANPMRDGSFKKATPFSYGSGHIRPNRAMDPGLVYDLSE 641 (782)
Q Consensus 562 GTSmAaP~VAG~aALl~q~~p~~sp~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~G~G~vd~~~A~~~~lv~~~~~ 641 (782)
|||||||||||++|||+|+||+|+|++||++||+||++++..+ .+.+||+|+||+.+|+
T Consensus 367 GTSmAaP~VAG~aALl~~~~p~~sp~~ik~~L~~TA~~~~~~g-----------~~~~~G~G~vn~~~A~---------- 425 (441)
T 1y9z_A 367 GTSMATPHVSGVATLVWSYHPECSASQVRAALNATADDLSVAG-----------RDNQTGYGMINAVAAK---------- 425 (441)
T ss_dssp SHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHSBCCSSSS-----------CBTTTBTCBCCHHHHH----------
T ss_pred ccccCCcccchHHHHHHHHCCCCCHHHHHHHHHhhchhhccCC-----------CcccccccccCHHHHH----------
Confidence 9999999999999999999999999999999999999886543 3568999999999996
Q ss_pred chhhhhcccCCCC
Q 048642 642 DDYLDFLCSIGYN 654 (782)
Q Consensus 642 ~~~~~~~~~~~~~ 654 (782)
||+.|||.+++.
T Consensus 426 -~~~~~lc~~~~~ 437 (441)
T 1y9z_A 426 -AYLDESCTGPTD 437 (441)
T ss_dssp -HHHHHCTTCC--
T ss_pred -HHHHhhhcCCCC
Confidence 599999998864
No 8
>2p4e_P Proprotein convertase subtilisin/kexin type 9; protease, LDL receptor, LDL, endocytosis, hydrol; 1.98A {Homo sapiens}
Probab=100.00 E-value=7e-58 Score=524.97 Aligned_cols=339 Identities=20% Similarity=0.229 Sum_probs=58.2
Q ss_pred CeEEEEeCCCCCCCCccccccccchhhHHHHHHHhhCCcccccccEeEEeccceeeEEEEcCHHHHHHHhCCCCeEEEEe
Q 048642 31 QSYVVYLGSHAHGPEVTTADLDRVTDSHHEFLGSFLGSTEKARDAIFYSYQNHINGFAATLEEEEAAEIAKHPDVVSIFP 110 (782)
Q Consensus 31 ~~yiV~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~y~~~~ng~s~~~~~~~~~~L~~~p~V~~V~~ 110 (782)
++|||+||+.... ...+.+.+++.....+. ....++.+.|++.|+||+++++++++++|+++|+|++|++
T Consensus 76 g~YIV~lk~~~~~---------~~~~~~~~~l~a~~~~~-g~~~~v~~~y~~~~~Gfsv~l~~~~l~~L~~~P~V~~Vep 145 (692)
T 2p4e_P 76 GTYVVVLKEETHL---------SQSERTARRLQAQAARR-GYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEE 145 (692)
T ss_dssp EEEEEEECTTCCH---------HHHHHHHHHHHHHHHHT-TCCCEEEEEECSSSCEEEEECCGGGHHHHHTSTTEEEEEE
T ss_pred CcEEEEECCCCCH---------HHHHHHHHHHHHHHhhc-ccccceeeEeeccccEEEEEeCHHHHHHHHcCCCceEEEe
Confidence 4899999987763 33344444444432211 1235789999999999999999999999999999999999
Q ss_pred cccccccccccccccccccCCccc-CCCccccCCCCCceEEEEecCCcCcCCCCccCCCCCCCCCCccccccCCCCCccc
Q 048642 111 NKGKKLHTTRSWDFMLLENNGVIH-SSSAWGKGRFGEDIIIANLDTGVWPESKSFSDEGYGPVPSRWKGTCQNSTKEGVR 189 (782)
Q Consensus 111 ~~~~~~~~~~s~~~~g~~~~~~~~-~~~~w~~~~~G~gV~VaVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~ 189 (782)
++.+... ..+| ++..+.+.. ....|..+.+|+||+|||||||||++||+|.++. .|
T Consensus 146 d~~v~~~-~~pW---gL~~i~~~~~~~~~w~~~~~G~GV~VaVIDTGId~~HpdL~gr~------~~------------- 202 (692)
T 2p4e_P 146 DSSVFAQ-SIPW---NLERITPPRYRADEYQPPDGGSLVEVYLLDTSIQSDHREIEGRV------MV------------- 202 (692)
T ss_dssp EEEEEEC-------------------------------------------------------------------------
T ss_pred ccccccC-CCCc---chhhcccccccccccccCCCCCCcEEEEEcCCCCCCChhhcCce------Ee-------------
Confidence 9987542 2334 444332211 2347888889999999999999999999998641 00
Q ss_pred ccccccccccchhhHhhhcccccccccCCCCCCCCCCccchhhhhhhccCCCCccccccCCCcceecCcccccccccccc
Q 048642 190 CNRKLIGARYFNRAYAAYVKQHNISVNFNNTARDHEGHGTHTLSTAGGNLVPGVNVFGMGNGTAKGGSPKARVAAYKVCW 269 (782)
Q Consensus 190 ~~~ki~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~l~~~kv~~ 269 (782)
....+..+ .++ .+ ....+.|.+||||||||||+|+. .||||+|+|+++|+++
T Consensus 203 ------~~~~~~~d---~dg-~~----~~~~~~D~~GHGTHVAGiIAg~~--------------~GVAP~A~L~~vKVl~ 254 (692)
T 2p4e_P 203 ------TDFENVPE---EDG-TR----FHRQASKCDSHGTHLAGVVSGRD--------------AGVAKGASMRSLRVLN 254 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ------cccccccC---CCC-Cc----ccCCCCCCCCcHHHhhhHhhcCC--------------CccCCCCEEEEEEeec
Confidence 00000000 000 00 01346789999999999999873 6999999999999998
Q ss_pred CCCCCCCCChhHHHHHHHHhhhC------CCeEEEEccCCCCCCCCCCHHHHHHHHHHhcCcEEEEecCCCCCCCCcc-c
Q 048642 270 PQVSDGQCFDADILKGFDMAIHD------GVDVISVSLGGDPADYFNDGTAIGAFHAVKHGIVVVCSAANSGPELGTV-T 342 (782)
Q Consensus 270 ~~~~~g~~~~~~i~~ai~~a~~~------g~dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~-~ 342 (782)
+. |.++.+++++||+|++++ +++|||||||+.. ...+..++.++.++|++||+||||+|.+.... +
T Consensus 255 ~~---G~g~~s~ii~aI~~a~~~~~~~~~g~~VINmSlGg~~----s~~l~~Ai~~A~~~GVlvVaAAGN~G~~~~~~sP 327 (692)
T 2p4e_P 255 CQ---GKGTVSGTLIGLEFIRKSQLVQPVGPLVVLLPLAGGY----SRVLNAACQRLARAGVVLVTAAGNFRDDACLYSP 327 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CC---CCCCHHHHHHHHHHHHhhhhcccCCceEEEecCCCCC----cHHHHHHHHHHHHCCCEEEEECCCCCCCCCccCc
Confidence 76 467889999999999986 8999999999763 34455666788899999999999999765433 5
Q ss_pred CCCCcEEEEccccCCccceeeEEecCCeEEeeeeccCCCCCCcccceEecccccccCCCcccccccCCCCCCCCCccceE
Q 048642 343 NVSPWIITVGASTLDREFQNFVELRNGQRFKGTSLSKSLPNDTFYPLITGLQAKAANADDTAASLCKNGALDHEKVKGKI 422 (782)
Q Consensus 343 ~~~p~vitVgas~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gki 422 (782)
...|++|+|||++.+...
T Consensus 328 A~~~~vItVGA~d~~~~~-------------------------------------------------------------- 345 (692)
T 2p4e_P 328 ASAPEVITVGATNAQDQP-------------------------------------------------------------- 345 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccCCCEEEEEEEcCCCCc--------------------------------------------------------------
Confidence 567999999986543200
Q ss_pred EEEeeCCcchhhhhHHHHHcCceEEEEeccCCCCCccccCCCcccEEEEehhhHHHHHHHHhcCCCceEEEecCeeeccC
Q 048642 423 LVCLRGDTARVDKGRQAAVAGAVGMILCNDKSSGNEITADPHFLPASQITYKDGVKVLDYIKSSDNPMGYITSPSTYLNA 502 (782)
Q Consensus 423 vl~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~ 502 (782)
T Consensus 346 -------------------------------------------------------------------------------- 345 (692)
T 2p4e_P 346 -------------------------------------------------------------------------------- 345 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCccccccCCCCCCCCCCCcCCeEEeCCceEEEeecCCCCCCCCCCCCCCcceeeeccccchhhHHHHHHHHHHhhCC
Q 048642 503 KPSPFMASFSSAGPNKITPEILKPDITAPGVNIIAAFTGAIGATELPYDTRRIPYNIMSGTSMSCPHVAGVVGLLKTAHP 582 (782)
Q Consensus 503 ~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p 582 (782)
...-+.||+|||. |||+|||++|+++++... ..|..++|||||||||||++|||+|++|
T Consensus 346 --a~~ss~fSn~G~~--------vDI~APG~~I~St~~~~~-----------~~y~~~SGTSmAAPhVAG~aALlls~~P 404 (692)
T 2p4e_P 346 --VTLGTLGTNFGRC--------VDLFAPGEDIIGASSDCS-----------TCFVSQSGTSQAAAHVAGIAAMMLSAEP 404 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --cccccccCCCCCc--------eeEEecCCcEEeeccCCC-----------CceEeccchHHHHHHHHHHHHHHHHHCC
Confidence 0011238999984 599999999999998632 2789999999999999999999999999
Q ss_pred CCCHHHHHHHHHhccccc
Q 048642 583 DWSPSAIRSAIMTTARTR 600 (782)
Q Consensus 583 ~~sp~~ik~~L~~TA~~~ 600 (782)
+|+|++||++|++||.+.
T Consensus 405 ~ltp~qVk~~L~~tA~~~ 422 (692)
T 2p4e_P 405 ELTLAELRQRLIHFSAKD 422 (692)
T ss_dssp ------------------
T ss_pred CCCHHHHHHHHHHhcccc
Confidence 999999999999999764
No 9
>1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1
Probab=100.00 E-value=1.5e-54 Score=501.02 Aligned_cols=380 Identities=21% Similarity=0.242 Sum_probs=276.3
Q ss_pred CCCCCeEEEEeCCCCCCCCccccccccchhhHHHHHHHhhCCcccccccEeEEeccceeeEEEEcCH----HHHHHHh--
Q 048642 27 FAIKQSYVVYLGSHAHGPEVTTADLDRVTDSHHEFLGSFLGSTEKARDAIFYSYQNHINGFAATLEE----EEAAEIA-- 100 (782)
Q Consensus 27 ~~~~~~yiV~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~y~~~~ng~s~~~~~----~~~~~L~-- 100 (782)
...+++|||+||+... ..++++.. ..++.+++. .+++++++++. +.+++|+
T Consensus 28 ~~~~~~~IV~~k~~~~---------------~~~~~~~~-------g~~v~~~~~-~i~~~~~~~~~~~~~~~~~~l~~~ 84 (671)
T 1r6v_A 28 EYTEGKILVGYNDRSE---------------VDKIVKAV-------NGKVVLELP-QIKVVSIKLNGMTVKQAYDKIKAL 84 (671)
T ss_dssp SBCTTEEEEEESSHHH---------------HHHHHHHH-------TCEEEEEEG-GGTEEEEECSSCCHHHHHHHHTTS
T ss_pred ccCCccEEEEECCCcC---------------HHHHHHhc-------CCeEEEEcC-CCcEEEEEeCCcCHHHHHHHHHhc
Confidence 3467899999997321 12223222 235677776 78999999865 3356676
Q ss_pred CCCCeEEEEecccccccccc---------------------------cccccccccCCcccCCCc-cccCCCCCceEEEE
Q 048642 101 KHPDVVSIFPNKGKKLHTTR---------------------------SWDFMLLENNGVIHSSSA-WGKGRFGEDIIIAN 152 (782)
Q Consensus 101 ~~p~V~~V~~~~~~~~~~~~---------------------------s~~~~g~~~~~~~~~~~~-w~~~~~G~gV~VaV 152 (782)
++|+|++|||+..+++.... ....|++..++ +..+ |+. .+|+||+|||
T Consensus 85 ~~~~V~~vepd~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~l~~I~---~~~a~w~~-~tG~gV~VAV 160 (671)
T 1r6v_A 85 ALKGIRYVEPSYKRELIKPTVVKPNPDMYKIRKPGLNSTARDYGEELSNELWGLEAIG---VTQQLWEE-ASGTNIIVAV 160 (671)
T ss_dssp CCSSEEEEECCBCCEECCCEECCCCTTTTCSSSSCCSSSTTCCSSTTGGGCHHHHHTT---CCHHHHHH-CSCTTCEEEE
T ss_pred cCCCceEEecCeEEEeccccccCcccccccccccccccccccccccccccCCchhccC---Cchhhhhc-cCCCCCEEEE
Confidence 48999999999776543100 01223444332 5566 888 8999999999
Q ss_pred ecCCcCcCCCCccCCCCCCCCCCccccccCCCCCcccccccccccccchhhHhhhcccccccccCCCCCCCCCCccchhh
Q 048642 153 LDTGVWPESKSFSDEGYGPVPSRWKGTCQNSTKEGVRCNRKLIGARYFNRAYAAYVKQHNISVNFNNTARDHEGHGTHTL 232 (782)
Q Consensus 153 IDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~~~ki~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~gHGThVA 232 (782)
||||||++||+|.++ ++..+.+..+. ..+ ...+..|.+|||||||
T Consensus 161 IDTGVd~~HpdL~~~--------------------------~~~g~~~~~~~-----~~p----~~~d~~d~~gHGThVA 205 (671)
T 1r6v_A 161 VDTGVDGTHPDLEGQ--------------------------VIAGYRPAFDE-----ELP----AGTDSSYGGSAGTHVA 205 (671)
T ss_dssp EESCCBTTSGGGTTT--------------------------BCCEEEGGGTE-----EEC----TTCBCCTTCSHHHHHH
T ss_pred EeCCCCCCCcccccc--------------------------EEecccccCCC-----cCC----CCCCCccCCCcchhhh
Confidence 999999999999864 11111111000 000 1123446789999999
Q ss_pred hhhhccCCCCccccccCCCcceecCccccccccccccCC---CCCCCCChhHHHHHHHHhhhCCCeEEEEccCCCCCCCC
Q 048642 233 STAGGNLVPGVNVFGMGNGTAKGGSPKARVAAYKVCWPQ---VSDGQCFDADILKGFDMAIHDGVDVISVSLGGDPADYF 309 (782)
Q Consensus 233 Giiag~~~~~~~~~G~~~~~~~GvAP~A~l~~~kv~~~~---~~~g~~~~~~i~~ai~~a~~~g~dVIn~SlG~~~~~~~ 309 (782)
|||||.. ++..+.||||+|+|+.+|+++.. ...+....+.+++||+||+++|++|||||||... .
T Consensus 206 GiIAa~~---------ng~gv~GVAP~A~I~~vkv~~~~~~~~g~g~~s~~~i~~ai~~A~~~gadVIN~SlG~~~---~ 273 (671)
T 1r6v_A 206 GTIAAKK---------DGKGIVGVAPGAKIMPIVIFDDPALVGGNGYVGDDYVAAGIIWATDHGAKVMNHSWGGWG---Y 273 (671)
T ss_dssp HHHHCCC---------SSSSCCCSCTTSEEEEEESBCCHHHHCTTSBCCHHHHHHHHHHHHHTTCSEEEECEEBSC---C
T ss_pred hhhhccC---------CCCceEEECCCCEEEEEEeccCccccCCCCccCHHHHHHHHHHHHHcCCCEEEeCCCCCC---C
Confidence 9999974 12345899999999999999761 1112345667999999999999999999999862 3
Q ss_pred CCHHHHHHHHHHhcCcEEEEecCCCCCCC-CcccCCCCcEEEEccccCCccceeeEEecCCeEEeeeeccCCCCCCcccc
Q 048642 310 NDGTAIGAFHAVKHGIVVVCSAANSGPEL-GTVTNVSPWIITVGASTLDREFQNFVELRNGQRFKGTSLSKSLPNDTFYP 388 (782)
Q Consensus 310 ~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~-~~~~~~~p~vitVgas~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~p 388 (782)
...+..++.+|.++|+++|+||||+|... ..++...|++|+|||++.+..
T Consensus 274 s~~l~~Ai~~A~~~GvlvVaAAGN~g~~~~~~yPA~~~~VItVgA~d~~g~----------------------------- 324 (671)
T 1r6v_A 274 SYTMKEAFDYAMEHGVVMVVSAGNNTSDSHHQYPAGYPGVIQVAALDYYGG----------------------------- 324 (671)
T ss_dssp CHHHHHHHHHHHHTTCEEEEECCSCSSSCCCCBTTTSTTCEEEEEEEEETT-----------------------------
T ss_pred CHHHHHHHHHHHhCCCEEEEeCCCCCCCCCccCcccCCCeEEEEEEcCCCC-----------------------------
Confidence 45678888899999999999999999764 455567899999998643210
Q ss_pred eEecccccccCCCcccccccCCCCCCCCCccceEEEEeeCCcchhhhhHHHHHcCceEEEEeccCCCCCccccCCCcccE
Q 048642 389 LITGLQAKAANADDTAASLCKNGALDHEKVKGKILVCLRGDTARVDKGRQAAVAGAVGMILCNDKSSGNEITADPHFLPA 468 (782)
Q Consensus 389 l~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~ 468 (782)
T Consensus 325 -------------------------------------------------------------------------------- 324 (671)
T 1r6v_A 325 -------------------------------------------------------------------------------- 324 (671)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEehhhHHHHHHHHhcCCCceEEEecCeeeccCCCCCccccccCCCCCCCCCCCcCCeEEeCCceEEEeecCCCCCCC-
Q 048642 469 SQITYKDGVKVLDYIKSSDNPMGYITSPSTYLNAKPSPFMASFSSAGPNKITPEILKPDITAPGVNIIAAFTGAIGATE- 547 (782)
Q Consensus 469 ~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~- 547 (782)
...++.||++||.. ||+|||++|+++++.......
T Consensus 325 ------------------------------------~~~~a~fSn~G~~v--------dv~APG~~I~St~p~~~~~g~~ 360 (671)
T 1r6v_A 325 ------------------------------------TFRVAGFSSRSDGV--------SVGAPGVTILSTVPGEDSIGYE 360 (671)
T ss_dssp ------------------------------------EEEECSSSCCCTTE--------EEEEECSSEEEECCCTTSTTCC
T ss_pred ------------------------------------ceeeccccCCCCCe--------eEEecCCCEEeecCCCCccccc
Confidence 01478999999976 999999999999886421110
Q ss_pred ----CCCCCCCcceeeeccccchhhHHHHHHHHHHhhCCCCCHHHHHHHHHhccccccCCCCCCCCCCCCCCCCCccccc
Q 048642 548 ----LPYDTRRIPYNIMSGTSMSCPHVAGVVGLLKTAHPDWSPSAIRSAIMTTARTRDNTANPMRDGSFKKATPFSYGSG 623 (782)
Q Consensus 548 ----~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~sp~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~G~G 623 (782)
.......+.|..++|||||||||||++|||+|++|+++|.+||++|++||+++...+ .+..||+|
T Consensus 361 ~~~~~~~~~~~~~y~~~sGTSmAAP~VAGvaALl~s~~P~lt~~~Vr~~L~~TA~~~~~~g-----------~d~~~G~G 429 (671)
T 1r6v_A 361 GHNENVPATNGGTYDYYQGTSMAAPHVTGVVAVLLQKFPNAKPWQIRKLLENTAFDFNGNG-----------WDHDTGYG 429 (671)
T ss_dssp CCCTTCCCSSSCCEEEEESHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCSSSSS-----------CBTTTBTC
T ss_pred cccccccccCCCceEEecCccHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCcCCCCCC-----------CCCCcccc
Confidence 001112347999999999999999999999999999999999999999999875432 35689999
Q ss_pred ccCccccCCCCccccCCcchh
Q 048642 624 HIRPNRAMDPGLVYDLSEDDY 644 (782)
Q Consensus 624 ~vd~~~A~~~~lv~~~~~~~~ 644 (782)
+||+.+|++..+..+....+|
T Consensus 430 ~vna~~Al~~~l~~~~~~~~~ 450 (671)
T 1r6v_A 430 LVKLDAALQGPLPTQGGVEEF 450 (671)
T ss_dssp BCCHHHHHHCCCCSSSEEEEE
T ss_pred eeCHHHHhhhhcCCCCCccce
Confidence 999999999877665544444
No 10
>1gci_A Subtilisin; hydrolase, serine protease; 0.78A {Bacillus lentus} SCOP: c.41.1.1 PDB: 1jea_A 1ndq_A 1svn_A 1tk2_A* 3bx1_A 1ah2_A 1iav_A* 1c9m_A* 1wsd_A 1mpt_A 1ndu_A 1c9j_A 1q5p_A* 1st3_A 1c9n_A*
Probab=100.00 E-value=1.3e-52 Score=440.08 Aligned_cols=257 Identities=31% Similarity=0.447 Sum_probs=219.2
Q ss_pred CCCccccCCCCCceEEEEecCCcCcCCCCccCCCCCCCCCCccccccCCCCCcccccccccccccchhhHhhhccccccc
Q 048642 135 SSSAWGKGRFGEDIIIANLDTGVWPESKSFSDEGYGPVPSRWKGTCQNSTKEGVRCNRKLIGARYFNRAYAAYVKQHNIS 214 (782)
Q Consensus 135 ~~~~w~~~~~G~gV~VaVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~~~ki~g~~~~~~~~~~~~~~~~~~ 214 (782)
+..+|..+++|+||+|+|||||| .+||+|+. ...++|..+
T Consensus 13 ~~~a~~~g~~G~gv~VaViDtGi-~~h~~l~~----------------------------~~~~~~~~~----------- 52 (269)
T 1gci_A 13 APAAHNRGLTGSGVKVAVLDTGI-STHPDLNI----------------------------RGGASFVPG----------- 52 (269)
T ss_dssp HHHHHHTTCSCTTCEEEEEESCC-CCCTTCCE----------------------------EEEEECSTT-----------
T ss_pred cHHHHhcCCCCCCCEEEEECCCC-CCCHhhcc----------------------------cCCcccCCC-----------
Confidence 56899999999999999999999 89999941 122233221
Q ss_pred ccCCCCCCCCCCccchhhhhhhccCCCCccccccCCCcceecCccccccccccccCCCCCCCCChhHHHHHHHHhhhCCC
Q 048642 215 VNFNNTARDHEGHGTHTLSTAGGNLVPGVNVFGMGNGTAKGGSPKARVAAYKVCWPQVSDGQCFDADILKGFDMAIHDGV 294 (782)
Q Consensus 215 ~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~l~~~kv~~~~~~~g~~~~~~i~~ai~~a~~~g~ 294 (782)
...+.|..||||||||||+|.. +...+.||||+|+|+.+|+++.. +.+..+++++||+|++++++
T Consensus 53 ---~~~~~d~~gHGT~vAgiia~~~---------~~~~~~GvAp~a~l~~~~v~~~~---g~~~~~~~~~ai~~a~~~~~ 117 (269)
T 1gci_A 53 ---EPSTQDGNGHGTHVAGTIAALN---------NSIGVLGVAPSAELYAVKVLGAS---GSGSVSSIAQGLEWAGNNGM 117 (269)
T ss_dssp ---CCSCSCSSSHHHHHHHHHHCCC---------SSSBCCCSSTTCEEEEEECBCTT---SCBCHHHHHHHHHHHHHTTC
T ss_pred ---CCCCCCCCCChHHHHHHHhcCc---------CCCCcEEeCCCCEEEEEEeECCC---CCcCHHHHHHHHHHHHHCCC
Confidence 2235688999999999999973 12335899999999999999876 46788899999999999999
Q ss_pred eEEEEccCCCCCCCCCCHHHHHHHHHHhcCcEEEEecCCCCCCCCcccCCCCcEEEEccccCCccceeeEEecCCeEEee
Q 048642 295 DVISVSLGGDPADYFNDGTAIGAFHAVKHGIVVVCSAANSGPELGTVTNVSPWIITVGASTLDREFQNFVELRNGQRFKG 374 (782)
Q Consensus 295 dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVgas~~~~~~~~~~~~~~~~~~~g 374 (782)
+|||||||... ....+..++.++.++|++||+||||+|.....++...+++|+|||++.
T Consensus 118 ~Vin~S~G~~~---~~~~~~~ai~~a~~~gv~vV~AaGN~g~~~~~~Pa~~~~vi~Vga~~~------------------ 176 (269)
T 1gci_A 118 HVANLSLGSPS---PSATLEQAVNSATSRGVLVVAASGNSGAGSISYPARYANAMAVGATDQ------------------ 176 (269)
T ss_dssp SEEEECCCBSS---CCHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEECT------------------
T ss_pred eEEEeCCCCCC---CCHHHHHHHHHHHHCCCEEEEecCCCCCCCCcCCccCCCeEEEEeecC------------------
Confidence 99999999873 245677888889999999999999999877677777899999998542
Q ss_pred eeccCCCCCCcccceEecccccccCCCcccccccCCCCCCCCCccceEEEEeeCCcchhhhhHHHHHcCceEEEEeccCC
Q 048642 375 TSLSKSLPNDTFYPLITGLQAKAANADDTAASLCKNGALDHEKVKGKILVCLRGDTARVDKGRQAAVAGAVGMILCNDKS 454 (782)
Q Consensus 375 ~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~ 454 (782)
T Consensus 177 -------------------------------------------------------------------------------- 176 (269)
T 1gci_A 177 -------------------------------------------------------------------------------- 176 (269)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCccccCCCcccEEEEehhhHHHHHHHHhcCCCceEEEecCeeeccCCCCCccccccCCCCCCCCCCCcCCeEEeCCce
Q 048642 455 SGNEITADPHFLPASQITYKDGVKVLDYIKSSDNPMGYITSPSTYLNAKPSPFMASFSSAGPNKITPEILKPDITAPGVN 534 (782)
Q Consensus 455 ~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~ 534 (782)
.+.++.||++||.. ||+|||++
T Consensus 177 --------------------------------------------------~~~~~~~S~~G~~~--------di~APG~~ 198 (269)
T 1gci_A 177 --------------------------------------------------NNNRASFSQYGAGL--------DIVAPGVN 198 (269)
T ss_dssp --------------------------------------------------TSCBCTTCCCSTTE--------EEEEECSS
T ss_pred --------------------------------------------------CCCCCCCCCCCCCc--------ceEecCCC
Confidence 14678999999975 99999999
Q ss_pred EEEeecCCCCCCCCCCCCCCcceeeeccccchhhHHHHHHHHHHhhCCCCCHHHHHHHHHhccccccCCCCCCCCCCCCC
Q 048642 535 IIAAFTGAIGATELPYDTRRIPYNIMSGTSMSCPHVAGVVGLLKTAHPDWSPSAIRSAIMTTARTRDNTANPMRDGSFKK 614 (782)
Q Consensus 535 I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~sp~~ik~~L~~TA~~~~~~g~~~~~~~~~~ 614 (782)
|+++++.+ .|..++|||||||||||++|||+|++|+|++.|||++|++||+++.
T Consensus 199 i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~p~~t~~~v~~~L~~tA~~~g------------- 252 (269)
T 1gci_A 199 VQSTYPGS-------------TYASLNGTSMATPHVAGAAALVKQKNPSWSNVQIRNHLKNTATSLG------------- 252 (269)
T ss_dssp EEEEETTT-------------EEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTSBCCS-------------
T ss_pred eEeecCCC-------------CEEEcCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCC-------------
Confidence 99998764 8999999999999999999999999999999999999999999863
Q ss_pred CCCCcccccccCccccCC
Q 048642 615 ATPFSYGSGHIRPNRAMD 632 (782)
Q Consensus 615 ~~~~~~G~G~vd~~~A~~ 632 (782)
+++.||+|+||+.+|++
T Consensus 253 -~~~~~G~G~vn~~~A~~ 269 (269)
T 1gci_A 253 -STNLYGSGLVNAEAATR 269 (269)
T ss_dssp -CHHHHTTCBCCHHHHTC
T ss_pred -CCCCcccCccCHHHHcC
Confidence 35689999999999985
No 11
>1r0r_E Subtilisin carlsberg; high resolution, serine protease, protein inhibitor, hydrolase; 1.10A {Bacillus licheniformis} SCOP: c.41.1.1 PDB: 1af4_A* 1be8_A* 1bfk_A 1bfu_A 1be6_A 1oyv_A 1cse_E 1sbc_A 1sca_A 1scb_A 1scd_A 2sec_E 2wuv_A 2wuw_E 1yu6_A 1scn_E* 1c3l_A 1avt_A* 1av7_A* 1sel_A ...
Probab=100.00 E-value=9.9e-53 Score=442.78 Aligned_cols=258 Identities=31% Similarity=0.443 Sum_probs=217.2
Q ss_pred CCCccccCCCCCceEEEEecCCcCcCCCCccCCCCCCCCCCccccccCCCCCcccccccccccccchhhHhhhccccccc
Q 048642 135 SSSAWGKGRFGEDIIIANLDTGVWPESKSFSDEGYGPVPSRWKGTCQNSTKEGVRCNRKLIGARYFNRAYAAYVKQHNIS 214 (782)
Q Consensus 135 ~~~~w~~~~~G~gV~VaVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~~~ki~g~~~~~~~~~~~~~~~~~~ 214 (782)
+..+|..+++|+||+|||||||||++||+|+. ...+.|..+
T Consensus 13 ~~~~~~~g~~G~gv~VaViDtGid~~h~~l~~----------------------------~~g~~~~~~----------- 53 (274)
T 1r0r_E 13 ADKVQAQGFKGANVKVAVLDTGIQASHPDLNV----------------------------VGGASFVAG----------- 53 (274)
T ss_dssp HHHHHHHTCSCTTCEEEEEESCCCTTCTTCCE----------------------------EEEEECSTT-----------
T ss_pred CHHHHhcCCCCCCCEEEEEcCCCCCCCHhHcC----------------------------CCCccccCC-----------
Confidence 56899999999999999999999999999941 122233221
Q ss_pred ccCCCCCCCCCCccchhhhhhhccCCCCccccccCCCcceecCccccccccccccCCCCCCCCChhHHHHHHHHhhhCCC
Q 048642 215 VNFNNTARDHEGHGTHTLSTAGGNLVPGVNVFGMGNGTAKGGSPKARVAAYKVCWPQVSDGQCFDADILKGFDMAIHDGV 294 (782)
Q Consensus 215 ~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~l~~~kv~~~~~~~g~~~~~~i~~ai~~a~~~g~ 294 (782)
.....|..||||||||||+|.. +...+.||||+|+|+.+|+++.. +.+..+++++||+|++++++
T Consensus 54 ---~~~~~d~~gHGT~vAgiia~~~---------~~~g~~GvAp~a~l~~~~v~~~~---g~~~~~~i~~ai~~a~~~~~ 118 (274)
T 1r0r_E 54 ---EAYNTDGNGHGTHVAGTVAALD---------NTTGVLGVAPSVSLYAVKVLNSS---GSGSYSGIVSGIEWATTNGM 118 (274)
T ss_dssp ---CCTTCCSSSHHHHHHHHHHCCS---------SSSBCCCSSTTSEEEEEECSCTT---SEECHHHHHHHHHHHHHTTC
T ss_pred ---CCCCCCCCCCHHHHHHHHHccC---------CCCceEEECCCCEEEEEEEECCC---CCccHHHHHHHHHHHHHcCC
Confidence 2235688999999999999973 12345899999999999999876 45778899999999999999
Q ss_pred eEEEEccCCCCCCCCCCHHHHHHHHHHhcCcEEEEecCCCCCCC----CcccCCCCcEEEEccccCCccceeeEEecCCe
Q 048642 295 DVISVSLGGDPADYFNDGTAIGAFHAVKHGIVVVCSAANSGPEL----GTVTNVSPWIITVGASTLDREFQNFVELRNGQ 370 (782)
Q Consensus 295 dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~----~~~~~~~p~vitVgas~~~~~~~~~~~~~~~~ 370 (782)
+|||||||... ....+..++.++.++|+++|+||||+|... ..++...+++|+|||++.
T Consensus 119 ~Vin~S~G~~~---~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~~-------------- 181 (274)
T 1r0r_E 119 DVINMSLGGAS---GSTAMKQAVDNAYARGVVVVAAAGNSGNSGSTNTIGYPAKYDSVIAVGAVDS-------------- 181 (274)
T ss_dssp SEEEECEEBSS---CCHHHHHHHHHHHHTTCEEEEECCSCCCCTTCCCCCBTTTSTTSEEEEEECT--------------
T ss_pred CEEEeCCCCCC---CcHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCccccCCCCCCcEEEEEEecC--------------
Confidence 99999999873 245678888899999999999999999752 334456789999998542
Q ss_pred EEeeeeccCCCCCCcccceEecccccccCCCcccccccCCCCCCCCCccceEEEEeeCCcchhhhhHHHHHcCceEEEEe
Q 048642 371 RFKGTSLSKSLPNDTFYPLITGLQAKAANADDTAASLCKNGALDHEKVKGKILVCLRGDTARVDKGRQAAVAGAVGMILC 450 (782)
Q Consensus 371 ~~~g~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~ 450 (782)
T Consensus 182 -------------------------------------------------------------------------------- 181 (274)
T 1r0r_E 182 -------------------------------------------------------------------------------- 181 (274)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCCCCccccCCCcccEEEEehhhHHHHHHHHhcCCCceEEEecCeeeccCCCCCccccccCCCCCCCCCCCcCCeEEe
Q 048642 451 NDKSSGNEITADPHFLPASQITYKDGVKVLDYIKSSDNPMGYITSPSTYLNAKPSPFMASFSSAGPNKITPEILKPDITA 530 (782)
Q Consensus 451 n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~A 530 (782)
.+.++.||++||.+ ||+|
T Consensus 182 ------------------------------------------------------~~~~~~~S~~G~~~--------di~A 199 (274)
T 1r0r_E 182 ------------------------------------------------------NSNRASFSSVGAEL--------EVMA 199 (274)
T ss_dssp ------------------------------------------------------TSCBCTTCCCSTTE--------EEEE
T ss_pred ------------------------------------------------------CCCcCccCCCCCCc--------eEEe
Confidence 14678999999854 9999
Q ss_pred CCceEEEeecCCCCCCCCCCCCCCcceeeeccccchhhHHHHHHHHHHhhCCCCCHHHHHHHHHhccccccCCCCCCCCC
Q 048642 531 PGVNIIAAFTGAIGATELPYDTRRIPYNIMSGTSMSCPHVAGVVGLLKTAHPDWSPSAIRSAIMTTARTRDNTANPMRDG 610 (782)
Q Consensus 531 PG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~sp~~ik~~L~~TA~~~~~~g~~~~~~ 610 (782)
||++|+++++.+ .|..++|||||||||||++|||+|++|++++++||++|++||+++.
T Consensus 200 PG~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~g--------- 257 (274)
T 1r0r_E 200 PGAGVYSTYPTN-------------TYATLNGTSMASPHVAGAAALILSKHPNLSASQVRNRLSSTATYLG--------- 257 (274)
T ss_dssp ECSSEEEEETTT-------------EEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTCBCCS---------
T ss_pred CCCCeEeecCCC-------------CEEEeccHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCcccC---------
Confidence 999999998764 8999999999999999999999999999999999999999999763
Q ss_pred CCCCCCCCcccccccCccccCC
Q 048642 611 SFKKATPFSYGSGHIRPNRAMD 632 (782)
Q Consensus 611 ~~~~~~~~~~G~G~vd~~~A~~ 632 (782)
++..||+|+||+.+|++
T Consensus 258 -----~~~~~G~G~~~~~~A~~ 274 (274)
T 1r0r_E 258 -----SSFYYGKGLINVEAAAQ 274 (274)
T ss_dssp -----CHHHHTTCBCCHHHHTC
T ss_pred -----CCCCcccCccCHHHHhC
Confidence 36789999999999985
No 12
>1dbi_A AK.1 serine protease; hydrolase; 1.80A {Bacillus SP} SCOP: c.41.1.1
Probab=100.00 E-value=3.3e-52 Score=439.94 Aligned_cols=260 Identities=31% Similarity=0.365 Sum_probs=213.5
Q ss_pred CCCccccCCCCCceEEEEecCCcCcCCCCccCCCCCCCCCCccccccCCCCCcccccccccccccchhhHhhhccccccc
Q 048642 135 SSSAWGKGRFGEDIIIANLDTGVWPESKSFSDEGYGPVPSRWKGTCQNSTKEGVRCNRKLIGARYFNRAYAAYVKQHNIS 214 (782)
Q Consensus 135 ~~~~w~~~~~G~gV~VaVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~~~ki~g~~~~~~~~~~~~~~~~~~ 214 (782)
+..+|+.+..|+||+|||||||||++||+|.++ ++..++|.+
T Consensus 20 ~~~aw~~~~g~~gv~VaViDtGvd~~hp~l~~~--------------------------~~~~~~~~~------------ 61 (280)
T 1dbi_A 20 TDYAWDVTKGSSGQEIAVIDTGVDYTHPDLDGK--------------------------VIKGYDFVD------------ 61 (280)
T ss_dssp HHHHTTTCCCCTTCEEEEEESCCCTTSTTTTTT--------------------------EEEEEETTT------------
T ss_pred cHHHHhhcCCCCCCEEEEEeCCcCCCChhhccC--------------------------cccceeccC------------
Confidence 578999988888999999999999999999753 333344432
Q ss_pred ccCCCCCCCCCCccchhhhhhhccCCCCccccccCCCcceecCccccccccccccCCCCCCCCChhHHHHHHHHhhhCCC
Q 048642 215 VNFNNTARDHEGHGTHTLSTAGGNLVPGVNVFGMGNGTAKGGSPKARVAAYKVCWPQVSDGQCFDADILKGFDMAIHDGV 294 (782)
Q Consensus 215 ~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~l~~~kv~~~~~~~g~~~~~~i~~ai~~a~~~g~ 294 (782)
....+.|..||||||||||+|...+ ...+.||||+|+|+.+|+++.. |.+..+++++||+||+++|+
T Consensus 62 --~~~~~~d~~gHGT~vAgiia~~~~~--------~~g~~GvAp~a~l~~~kv~~~~---g~~~~~~i~~ai~~a~~~g~ 128 (280)
T 1dbi_A 62 --NDYDPMDLNNHGTHVAGIAAAETNN--------ATGIAGMAPNTRILAVRALDRN---GSGTLSDIADAIIYAADSGA 128 (280)
T ss_dssp --TBSCCCCSSSHHHHHHHHHHCCCSS--------SSSCCCSSSSCEEEEEECCCTT---SCCCHHHHHHHHHHHHHTTC
T ss_pred --CCCCCCCCCCcHHHHHHHHhCcCCC--------CCcceEeCCCCEEEEEEEECCC---CCcCHHHHHHHHHHHHHCCC
Confidence 1234678899999999999997532 2235899999999999999876 46788999999999999999
Q ss_pred eEEEEccCCCCCCCCCCHHHHHHHHHHhcCcEEEEecCCCCCCCCcccCCCCcEEEEccccCCccceeeEEecCCeEEee
Q 048642 295 DVISVSLGGDPADYFNDGTAIGAFHAVKHGIVVVCSAANSGPELGTVTNVSPWIITVGASTLDREFQNFVELRNGQRFKG 374 (782)
Q Consensus 295 dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVgas~~~~~~~~~~~~~~~~~~~g 374 (782)
+|||||||... ....+..++.++.++|++||+||||+|.....++...+++|+|||++.+
T Consensus 129 ~Vin~S~G~~~---~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~~----------------- 188 (280)
T 1dbi_A 129 EVINLSLGCDC---HTTTLENAVNYAWNKGSVVVAAAGNNGSSTTFEPASYENVIAVGAVDQY----------------- 188 (280)
T ss_dssp SEEEECCSSCC---CCHHHHHHHHHHHHTTCEEEEECCBC---------CCTTSEEEEEECTT-----------------
T ss_pred CEEEeCCCCCC---CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccccCCeEEEEeeCCC-----------------
Confidence 99999999872 3456788888999999999999999997766667778999999985421
Q ss_pred eeccCCCCCCcccceEecccccccCCCcccccccCCCCCCCCCccceEEEEeeCCcchhhhhHHHHHcCceEEEEeccCC
Q 048642 375 TSLSKSLPNDTFYPLITGLQAKAANADDTAASLCKNGALDHEKVKGKILVCLRGDTARVDKGRQAAVAGAVGMILCNDKS 454 (782)
Q Consensus 375 ~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~ 454 (782)
T Consensus 189 -------------------------------------------------------------------------------- 188 (280)
T 1dbi_A 189 -------------------------------------------------------------------------------- 188 (280)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCccccCCCcccEEEEehhhHHHHHHHHhcCCCceEEEecCeeeccCCCCCccccccCCCCCCCCCCCcCCeEEeCCce
Q 048642 455 SGNEITADPHFLPASQITYKDGVKVLDYIKSSDNPMGYITSPSTYLNAKPSPFMASFSSAGPNKITPEILKPDITAPGVN 534 (782)
Q Consensus 455 ~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~ 534 (782)
+.++.||++||.. ||+|||++
T Consensus 189 ---------------------------------------------------~~~~~~S~~G~~~--------dv~ApG~~ 209 (280)
T 1dbi_A 189 ---------------------------------------------------DRLASFSNYGTWV--------DVVAPGVD 209 (280)
T ss_dssp ---------------------------------------------------SCBCTTBCCSTTC--------CEEEECSS
T ss_pred ---------------------------------------------------CCcCCCCCCCCCc--------eEEEecCC
Confidence 4678999999865 99999999
Q ss_pred EEEeecCCCCCCCCCCCCCCcceeeeccccchhhHHHHHHHHHHhhCCCCCHHHHHHHHHhccccccCCCCCCCCCCCCC
Q 048642 535 IIAAFTGAIGATELPYDTRRIPYNIMSGTSMSCPHVAGVVGLLKTAHPDWSPSAIRSAIMTTARTRDNTANPMRDGSFKK 614 (782)
Q Consensus 535 I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~sp~~ik~~L~~TA~~~~~~g~~~~~~~~~~ 614 (782)
|+++++.+ .|..++|||||||||||++|||++ |.+++.+||++|++||+++...
T Consensus 210 i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~--p~~t~~~v~~~L~~ta~~~~~~----------- 263 (280)
T 1dbi_A 210 IVSTITGN-------------RYAYMSGTSMASPHVAGLAALLAS--QGRNNIEIRQAIEQTADKISGT----------- 263 (280)
T ss_dssp EEEEETTT-------------EEEEECSHHHHHHHHHHHHHHHHH--TTCCHHHHHHHHHHTSBCCTTB-----------
T ss_pred eEeecCCC-------------CEEEccCHHHHHHHHHHHHHHHHC--CCCCHHHHHHHHHHhCccCCCC-----------
Confidence 99998764 899999999999999999999987 8999999999999999987522
Q ss_pred CCCCcccccccCccccCC
Q 048642 615 ATPFSYGSGHIRPNRAMD 632 (782)
Q Consensus 615 ~~~~~~G~G~vd~~~A~~ 632 (782)
...||+|+||+.+|++
T Consensus 264 --~~~~G~G~vn~~~A~~ 279 (280)
T 1dbi_A 264 --GTYFKYGRINSYNAVT 279 (280)
T ss_dssp --TTTBSSEECCHHHHHT
T ss_pred --CCcccCCEECHHHHhc
Confidence 3579999999999986
No 13
>1to2_E Subtilisin BPN'; serine protease, hydrolase; HET: CIT 15P; 1.30A {Bacillus amyloliquefaciens} SCOP: c.41.1.1 PDB: 1tm1_E* 1tm3_E* 1tm4_E* 1lw6_E* 1tm7_E* 1tmg_E* 1to1_E* 1tm5_E* 1y1k_E* 1y33_E* 1y34_E* 1y3b_E* 1y3c_E* 1y3d_E* 1y3f_E* 1y48_E* 1y4a_E* 1y4d_E 1sup_A* 1sib_E ...
Probab=100.00 E-value=1.7e-52 Score=442.28 Aligned_cols=267 Identities=31% Similarity=0.446 Sum_probs=221.2
Q ss_pred cccccCCcccCCCccccCCCCCceEEEEecCCcCcCCCCccCCCCCCCCCCccccccCCCCCcccccccccccccchhhH
Q 048642 125 MLLENNGVIHSSSAWGKGRFGEDIIIANLDTGVWPESKSFSDEGYGPVPSRWKGTCQNSTKEGVRCNRKLIGARYFNRAY 204 (782)
Q Consensus 125 ~g~~~~~~~~~~~~w~~~~~G~gV~VaVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~~~ki~g~~~~~~~~ 204 (782)
|++..++ +..+|..+++|+||+|||||||||++||+|+. ...+.|..+
T Consensus 6 w~l~~i~---~~~~~~~g~~G~gv~VaViDtGid~~h~~l~~----------------------------~~g~~~~~~- 53 (281)
T 1to2_E 6 YGVSQIK---APALHSQGYTGSNVKVAVIDSGIDSSHPDLKV----------------------------AGGASMVPS- 53 (281)
T ss_dssp HHHHHTT---HHHHHHHTCSCTTCEEEEEESCCCTTCTTCCE----------------------------EEEEECCTT-
T ss_pred cchhhcC---hHHHHhcCCCCCCCEEEEEcCCCCCCCHHHcC----------------------------cCCccccCC-
Confidence 4554443 56899999999999999999999999999952 112222211
Q ss_pred hhhcccccccccCCCCCCCCCCccchhhhhhhccCCCCccccccCCCcceecCccccccccccccCCCCCCCCChhHHHH
Q 048642 205 AAYVKQHNISVNFNNTARDHEGHGTHTLSTAGGNLVPGVNVFGMGNGTAKGGSPKARVAAYKVCWPQVSDGQCFDADILK 284 (782)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~l~~~kv~~~~~~~g~~~~~~i~~ 284 (782)
+.....|..||||||||||+|.. +...+.||||+|+|+.+|+++.. +.+..+++++
T Consensus 54 ------------~~~~~~d~~gHGT~vAgiia~~~---------~~~g~~GvAp~a~l~~~kv~~~~---g~~~~~~i~~ 109 (281)
T 1to2_E 54 ------------ETNPFQDNNSHGTHVAGTVAALN---------NSIGVLGVAPSASLYAVKVLGAD---GSGQYSWIIN 109 (281)
T ss_dssp ------------CCCTTCCSSSHHHHHHHHHHCCS---------SSSSBCCSSTTSEEEEEECSCTT---SEECHHHHHH
T ss_pred ------------CCCCCCCCCCcHHHHHHHHhccC---------CCCcceeeCCCCEEEEEEEeCCC---CCccHHHHHH
Confidence 11223688999999999999973 12345899999999999999876 4577889999
Q ss_pred HHHHhhhCCCeEEEEccCCCCCCCCCCHHHHHHHHHHhcCcEEEEecCCCCCCC----CcccCCCCcEEEEccccCCccc
Q 048642 285 GFDMAIHDGVDVISVSLGGDPADYFNDGTAIGAFHAVKHGIVVVCSAANSGPEL----GTVTNVSPWIITVGASTLDREF 360 (782)
Q Consensus 285 ai~~a~~~g~dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~----~~~~~~~p~vitVgas~~~~~~ 360 (782)
+|+|+++++++|||||||... ....+..++.++.++|++||+||||+|... ..++...|++|+|||++.
T Consensus 110 ai~~a~~~~~~Vin~S~G~~~---~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~~---- 182 (281)
T 1to2_E 110 GIEWAIANNMDVINMSLGGPS---GSAALKAAVDKAVASGVVVVAAAGNEGTSGSSSTVGYPGKYPSVIAVGAVDS---- 182 (281)
T ss_dssp HHHHHHHTTCSEEEECEEBSC---CCHHHHHHHHHHHHTTCEEEEECCSCCCCTTSCCCCBTTTSTTSEEEEEECT----
T ss_pred HHHHHHHCCCcEEEECCcCCC---CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccccCcCCCCEEEEEEecC----
Confidence 999999999999999999873 346778888899999999999999999752 334456789999998542
Q ss_pred eeeEEecCCeEEeeeeccCCCCCCcccceEecccccccCCCcccccccCCCCCCCCCccceEEEEeeCCcchhhhhHHHH
Q 048642 361 QNFVELRNGQRFKGTSLSKSLPNDTFYPLITGLQAKAANADDTAASLCKNGALDHEKVKGKILVCLRGDTARVDKGRQAA 440 (782)
Q Consensus 361 ~~~~~~~~~~~~~g~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~ 440 (782)
T Consensus 183 -------------------------------------------------------------------------------- 182 (281)
T 1to2_E 183 -------------------------------------------------------------------------------- 182 (281)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HcCceEEEEeccCCCCCccccCCCcccEEEEehhhHHHHHHHHhcCCCceEEEecCeeeccCCCCCccccccCCCCCCCC
Q 048642 441 VAGAVGMILCNDKSSGNEITADPHFLPASQITYKDGVKVLDYIKSSDNPMGYITSPSTYLNAKPSPFMASFSSAGPNKIT 520 (782)
Q Consensus 441 ~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~ 520 (782)
.+.++.||++||..
T Consensus 183 ----------------------------------------------------------------~~~~~~fS~~G~~~-- 196 (281)
T 1to2_E 183 ----------------------------------------------------------------SNQRASFSSVGPEL-- 196 (281)
T ss_dssp ----------------------------------------------------------------TSCBCTTCCCSTTC--
T ss_pred ----------------------------------------------------------------CCCcCCcCCCCCCc--
Confidence 14678999999965
Q ss_pred CCCcCCeEEeCCceEEEeecCCCCCCCCCCCCCCcceeeeccccchhhHHHHHHHHHHhhCCCCCHHHHHHHHHhccccc
Q 048642 521 PEILKPDITAPGVNIIAAFTGAIGATELPYDTRRIPYNIMSGTSMSCPHVAGVVGLLKTAHPDWSPSAIRSAIMTTARTR 600 (782)
Q Consensus 521 ~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~sp~~ik~~L~~TA~~~ 600 (782)
||+|||++|+++++.+ .|..++|||||||||||++|||+|++|+|++++||++|++||+++
T Consensus 197 ------di~APG~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~ 257 (281)
T 1to2_E 197 ------DVMAPGVSIQSTLPGN-------------KYGAYNGTSMASPHVAGAAALILSKHPNWTNTQVRSSLENTTTKL 257 (281)
T ss_dssp ------CEEEECSSEEEEETTT-------------EEEEECBHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHTTCBCC
T ss_pred ------eEEecCCCeEeecCCC-------------CEEecCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhhCccc
Confidence 9999999999998764 899999999999999999999999999999999999999999986
Q ss_pred cCCCCCCCCCCCCCCCCCcccccccCccccCCC
Q 048642 601 DNTANPMRDGSFKKATPFSYGSGHIRPNRAMDP 633 (782)
Q Consensus 601 ~~~g~~~~~~~~~~~~~~~~G~G~vd~~~A~~~ 633 (782)
. +++.||||+||+.+|++.
T Consensus 258 g--------------~~~~~G~G~v~~~~a~~~ 276 (281)
T 1to2_E 258 G--------------DSFYYGKGLINVQAAAQH 276 (281)
T ss_dssp S--------------CHHHHTTCBCCHHHHTSS
T ss_pred C--------------CCCCcccceecHHHHhhh
Confidence 3 367899999999999985
No 14
>4h6x_A Thiazoline oxidase/subtilisin-like protease; hydrolase; 2.00A {Prochloron didemni} PDB: 4aks_A 4akt_A
Probab=100.00 E-value=1.6e-53 Score=465.64 Aligned_cols=305 Identities=20% Similarity=0.190 Sum_probs=200.7
Q ss_pred CCccccCCCCCceEEEEecCCcCcCCCCccCCCCCCCCCCccccccCCCCCcccccccc-----cccccchhhHhhhccc
Q 048642 136 SSAWGKGRFGEDIIIANLDTGVWPESKSFSDEGYGPVPSRWKGTCQNSTKEGVRCNRKL-----IGARYFNRAYAAYVKQ 210 (782)
Q Consensus 136 ~~~w~~~~~G~gV~VaVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~~~ki-----~g~~~~~~~~~~~~~~ 210 (782)
.++|+.+..|++|+|||||||||++||+|++..+.+....|+..++.........+..+ .+.......+...
T Consensus 21 ~~~w~~~~g~~~V~VaViDtGiD~~Hpdf~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 97 (357)
T 4h6x_A 21 ADLHNQTLGDPQITIVIIDGDPDYTLSCFEGAEVSKVFPYWHEPAEPITPEDYAAFQSIRDQGLKGKEKEEALEAVI--- 97 (357)
T ss_dssp HHHHHHCSCCTTSEEEEEESCCCTTSGGGTTCEEEECCCTTSCCCCCCCHHHHHHHHHHHHHTCCSHHHHHHHHHHC---
T ss_pred HHHHHhcCCCCCCEEEEEcCCCCCCChhHcCCCcccccccccccccccCcccccccccccCcccccccccccccccc---
Confidence 37899999999999999999999999999987666667777765543321000000000 0000000000000
Q ss_pred ccccccCCCCCCCCCCccchhhhhhhccCCCCccccccCCCcceecCccccccccccccCCCC--CCCCChhHHHHHHHH
Q 048642 211 HNISVNFNNTARDHEGHGTHTLSTAGGNLVPGVNVFGMGNGTAKGGSPKARVAAYKVCWPQVS--DGQCFDADILKGFDM 288 (782)
Q Consensus 211 ~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~l~~~kv~~~~~~--~g~~~~~~i~~ai~~ 288 (782)
+ +..++.|.+||||||||||+|+. ++.+.||||+|+|+.+|++..... .+.+...++++||+|
T Consensus 98 -~----~~~~~~D~~gHGThVAGiiag~~----------~~g~~GvAp~a~l~~~k~~~~~~~~~~~~~~~~~~~~ai~~ 162 (357)
T 4h6x_A 98 -P----DTKDRIVLNDHACHVTSTIVGQE----------HSPVFGIAPNCRVINMPQDAVIRGNYDDVMSPLNLARAIDL 162 (357)
T ss_dssp -T----TTHHHHHHHHHHHHHHHHHHCCT----------TSSCCCSCTTSEEEEEECTTC----------CHHHHHHHHH
T ss_pred -C----CCCCCcCCCCcHHHHHHHHhccC----------CCCceEeeccceEEeeeecccCCCCccccccHHHHHHHHHH
Confidence 0 22345578899999999999974 234589999999999999754311 023456678999999
Q ss_pred hhhCCCeEEEEccCCCC-CCCCCCHHHHHHHHHHhcCcEEEEecCCCCCCCCcccCCCCcEEEEccccCCccceeeEEec
Q 048642 289 AIHDGVDVISVSLGGDP-ADYFNDGTAIGAFHAVKHGIVVVCSAANSGPELGTVTNVSPWIITVGASTLDREFQNFVELR 367 (782)
Q Consensus 289 a~~~g~dVIn~SlG~~~-~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVgas~~~~~~~~~~~~~ 367 (782)
|+++|++|||||||... .....+.+..++.++.++|++||+||||+|.....++...|++|+|||++.
T Consensus 163 a~~~g~~Vin~S~G~~~~~~~~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~----------- 231 (357)
T 4h6x_A 163 ALELGANIIHCAFCRPTQTSEGEEILVQAIKKCQDNNVLIVSPTGNNSNESWCLPAVLPGTLAVGAAKV----------- 231 (357)
T ss_dssp HHHTTCSEEEEC-----------CHHHHHHHHHHHTTCEEEEECC---------------CEEEEEECT-----------
T ss_pred HHHcCCCEEeeccccCCccccchhHHHHHHHHHhhCCeEEEecccCCCCCcCcCcccCCCCceEEEecc-----------
Confidence 99999999999999873 344567788888899999999999999999877777778899999998543
Q ss_pred CCeEEeeeeccCCCCCCcccceEecccccccCCCcccccccCCCCCCCCCccceEEEEeeCCcchhhhhHHHHHcCceEE
Q 048642 368 NGQRFKGTSLSKSLPNDTFYPLITGLQAKAANADDTAASLCKNGALDHEKVKGKILVCLRGDTARVDKGRQAAVAGAVGM 447 (782)
Q Consensus 368 ~~~~~~g~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~ 447 (782)
T Consensus 232 -------------------------------------------------------------------------------- 231 (357)
T 4h6x_A 232 -------------------------------------------------------------------------------- 231 (357)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEeccCCCCCccccCCCcccEEEEehhhHHHHHHHHhcCCCceEEEecCeeeccCCCCCccccccCCCCCCCCCCCcCCe
Q 048642 448 ILCNDKSSGNEITADPHFLPASQITYKDGVKVLDYIKSSDNPMGYITSPSTYLNAKPSPFMASFSSAGPNKITPEILKPD 527 (782)
Q Consensus 448 i~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPD 527 (782)
.+.++.|||||+. ..|||
T Consensus 232 ---------------------------------------------------------~~~~~~fSn~G~~-----~~~~d 249 (357)
T 4h6x_A 232 ---------------------------------------------------------DGTPCHFSNWGGN-----NTKEG 249 (357)
T ss_dssp ---------------------------------------------------------TSSBCTTCC---C-----TTTTE
T ss_pred ---------------------------------------------------------CCcccccccCCCC-----CCccc
Confidence 2478899999975 35899
Q ss_pred EEeCCceEEEeecCCCCCCCCCCCCCCcceeeeccccchhhHHHHHHHHHHhh----CCCCCHHHHHHHHHhccccccCC
Q 048642 528 ITAPGVNIIAAFTGAIGATELPYDTRRIPYNIMSGTSMSCPHVAGVVGLLKTA----HPDWSPSAIRSAIMTTARTRDNT 603 (782)
Q Consensus 528 I~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~----~p~~sp~~ik~~L~~TA~~~~~~ 603 (782)
|+|||++|+++++.+ ..|..++|||||||||||++|||+++ +|.|+++|||++|++||++++..
T Consensus 250 i~APG~~i~s~~~~~------------~~~~~~sGTS~AaP~vaG~~All~s~~~~~~~~lt~~~v~~~L~~tA~~~~~~ 317 (357)
T 4h6x_A 250 ILAPGEEILGAQPCT------------EEPVRLTGTSMAAPVMTGISALLMSLQVQQGKPVDAEAVRTALLKTAIPCDPE 317 (357)
T ss_dssp EEEECSSEEECCTTC------------SCCEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHC-------
T ss_pred eeecCCCeEeccCCC------------CcccccCcHHHHHHHHHHHHHHHHHhhHhhCCCCCHHHHHHHHHhhCccCCCC
Confidence 999999999998764 26778999999999999999999954 56899999999999999987533
Q ss_pred CCCCCCCCCCCCCCCcccccccCccccCC
Q 048642 604 ANPMRDGSFKKATPFSYGSGHIRPNRAMD 632 (782)
Q Consensus 604 g~~~~~~~~~~~~~~~~G~G~vd~~~A~~ 632 (782)
. ...+.+||+|+||+.+|++
T Consensus 318 ~---------~~~~~~~G~G~vn~~~A~~ 337 (357)
T 4h6x_A 318 V---------VEEPERCLRGFVNIPGAMK 337 (357)
T ss_dssp ----------------CTTCBCCHHHHHH
T ss_pred C---------CCCcccceeEEecHHHHHH
Confidence 2 2346789999999999997
No 15
>2x8j_A Intracellular subtilisin protease; hydrolase, serine protease, intracellular proteinase regulat; HET: CSX 1PE; 1.56A {Bacillus clausii} PDB: 2wv7_A 2wwt_A 2xrm_A*
Probab=100.00 E-value=2.6e-52 Score=450.27 Aligned_cols=273 Identities=26% Similarity=0.366 Sum_probs=220.3
Q ss_pred cccccCCcccCCCccccCCCCCceEEEEecCCcCcCCCCccCCCCCCCCCCccccccCCCCCcccccccccccccchhhH
Q 048642 125 MLLENNGVIHSSSAWGKGRFGEDIIIANLDTGVWPESKSFSDEGYGPVPSRWKGTCQNSTKEGVRCNRKLIGARYFNRAY 204 (782)
Q Consensus 125 ~g~~~~~~~~~~~~w~~~~~G~gV~VaVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~~~ki~g~~~~~~~~ 204 (782)
|++..++ +..+|..+.+|+||+|||||||||++||+|.++ +...++|..++
T Consensus 23 w~l~~i~---~~~aw~~~~~G~gv~VaViDtGid~~Hp~l~~~--------------------------~~~~~~~~~~~ 73 (327)
T 2x8j_A 23 MGVEIVE---APAVWRASAKGAGQIIGVIDTGCQVDHPDLAER--------------------------IIGGVNLTTDY 73 (327)
T ss_dssp HHHHHTT---HHHHHHHHGGGTTCEEEEEESCCCTTCTTTGGG--------------------------EEEEEECSSGG
T ss_pred cchhhcC---hHHHHhcCCCCCCCEEEEEcCCCCCCChhHhhc--------------------------ccCCccccCCC
Confidence 4555443 568999999999999999999999999999743 44444554432
Q ss_pred hhhcccccccccCCCCCCCCCCccchhhhhhhccCCCCccccccCCCcceecCccccccccccccCCCCCCCCChhHHHH
Q 048642 205 AAYVKQHNISVNFNNTARDHEGHGTHTLSTAGGNLVPGVNVFGMGNGTAKGGSPKARVAAYKVCWPQVSDGQCFDADILK 284 (782)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~l~~~kv~~~~~~~g~~~~~~i~~ 284 (782)
.. +.....|..||||||||||+|.. ++..+.||||+|+|+.+|+++.. |.+..+++++
T Consensus 74 ~~----------~~~~~~d~~gHGT~VAgiia~~~---------~~~g~~GvAp~a~l~~~kv~~~~---g~~~~~~i~~ 131 (327)
T 2x8j_A 74 GG----------DETNFSDNNGHGTHVAGTVAAAE---------TGSGVVGVAPKADLFIIKALSGD---GSGEMGWIAK 131 (327)
T ss_dssp GG----------CTTCCCCSSSHHHHHHHHHHCCC---------CSSBCCCSSTTCEEEEEECSCTT---SEECHHHHHH
T ss_pred CC----------CCCCCCCCCCchHHHHHHHhccC---------CCCCcEeeCCCCEEEEEEeECCC---CCcCHHHHHH
Confidence 11 12245688999999999999984 12345899999999999999876 4577889999
Q ss_pred HHHHhhh------CCCeEEEEccCCCCCCCCCCHHHHHHHHHHhcCcEEEEecCCCCCCC-----CcccCCCCcEEEEcc
Q 048642 285 GFDMAIH------DGVDVISVSLGGDPADYFNDGTAIGAFHAVKHGIVVVCSAANSGPEL-----GTVTNVSPWIITVGA 353 (782)
Q Consensus 285 ai~~a~~------~g~dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~-----~~~~~~~p~vitVga 353 (782)
||+||++ .+++|||||||... ....+..++.++.++|++||+||||+|... ..++...+++|+|||
T Consensus 132 ai~~a~~~~~~~~~~~~Vin~S~G~~~---~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~~Pa~~~~vi~Vga 208 (327)
T 2x8j_A 132 AIRYAVDWRGPKGEQMRIITMSLGGPT---DSEELHDAVKYAVSNNVSVVCAAGNEGDGREDTNEFAYPAAYNEVIAVGA 208 (327)
T ss_dssp HHHHHHHCCCTTSCCCSEEEECEEBSC---CCHHHHHHHHHHHHTTCEEEEECCCT---------TCBTTTSTTSEEEEE
T ss_pred HHHHHHhhcccccCCceEEEECCCcCC---CCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCceeccccCCCEEEEEE
Confidence 9999999 89999999999873 245677888889999999999999999652 334556789999998
Q ss_pred ccCCccceeeEEecCCeEEeeeeccCCCCCCcccceEecccccccCCCcccccccCCCCCCCCCccceEEEEeeCCcchh
Q 048642 354 STLDREFQNFVELRNGQRFKGTSLSKSLPNDTFYPLITGLQAKAANADDTAASLCKNGALDHEKVKGKILVCLRGDTARV 433 (782)
Q Consensus 354 s~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~ 433 (782)
++.+
T Consensus 209 ~~~~---------------------------------------------------------------------------- 212 (327)
T 2x8j_A 209 VDFD---------------------------------------------------------------------------- 212 (327)
T ss_dssp ECTT----------------------------------------------------------------------------
T ss_pred ECCC----------------------------------------------------------------------------
Confidence 5431
Q ss_pred hhhHHHHHcCceEEEEeccCCCCCccccCCCcccEEEEehhhHHHHHHHHhcCCCceEEEecCeeeccCCCCCccccccC
Q 048642 434 DKGRQAAVAGAVGMILCNDKSSGNEITADPHFLPASQITYKDGVKVLDYIKSSDNPMGYITSPSTYLNAKPSPFMASFSS 513 (782)
Q Consensus 434 ~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs 513 (782)
+.++.||+
T Consensus 213 ------------------------------------------------------------------------~~~~~fS~ 220 (327)
T 2x8j_A 213 ------------------------------------------------------------------------LRLSDFTN 220 (327)
T ss_dssp ------------------------------------------------------------------------CCBSCC--
T ss_pred ------------------------------------------------------------------------CCCCCccC
Confidence 46789999
Q ss_pred CCCCCCCCCCcCCeEEeCCceEEEeecCCCCCCCCCCCCCCcceeeeccccchhhHHHHHHHHHHhh-----CCCCCHHH
Q 048642 514 AGPNKITPEILKPDITAPGVNIIAAFTGAIGATELPYDTRRIPYNIMSGTSMSCPHVAGVVGLLKTA-----HPDWSPSA 588 (782)
Q Consensus 514 ~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~-----~p~~sp~~ 588 (782)
+||.+ ||+|||++|+++++.+ .|..++|||||||||||++|||+|+ +|.+++.+
T Consensus 221 ~G~~~--------di~APG~~i~s~~~~~-------------~~~~~sGTS~AaP~VaG~aAll~~~~~~~~~p~ls~~~ 279 (327)
T 2x8j_A 221 TNEEI--------DIVAPGVGIKSTYLDS-------------GYAELSGTAMAAPHVAGALALIINLAEDAFKRSLSETE 279 (327)
T ss_dssp -CCCC--------SEEEECSSEEEECSTT-------------CEEEEESGGGTHHHHHHHHHHHHHHHHHHHTSCCCHHH
T ss_pred CCCCc--------eEecCcCceEeecCCC-------------CEEeecCHHHHHHHHHHHHHHHHHhhhhhcCCCCCHHH
Confidence 99854 9999999999998764 8999999999999999999999999 99999999
Q ss_pred HHHHHHhccccccCCCCCCCCCCCCCCCCCcccccccCccccCCC
Q 048642 589 IRSAIMTTARTRDNTANPMRDGSFKKATPFSYGSGHIRPNRAMDP 633 (782)
Q Consensus 589 ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~G~G~vd~~~A~~~ 633 (782)
||++|++||+++. .++..||+|+||+.+|++.
T Consensus 280 v~~~L~~tA~~~g-------------~~~~~~G~G~vd~~~A~~~ 311 (327)
T 2x8j_A 280 IYAQLVRRATPIG-------------FTAQAEGNGFLTLDLVERI 311 (327)
T ss_dssp HHHHHHTTEECCS-------------SCHHHHTTCEECTTHHHHH
T ss_pred HHHHHHHhCccCC-------------CCCCceeeeEECHHHHHHh
Confidence 9999999999763 2467899999999999973
No 16
>1thm_A Thermitase; hydrolase(serine protease); 1.37A {Thermoactinomyces vulgaris} SCOP: c.41.1.1 PDB: 2tec_E 1tec_E 3tec_E
Probab=100.00 E-value=1.5e-51 Score=434.89 Aligned_cols=259 Identities=32% Similarity=0.438 Sum_probs=219.3
Q ss_pred CCCccccCCCCCceEEEEecCCcCcCCCCccCCCCCCCCCCccccccCCCCCcccccccccccccchhhHhhhccccccc
Q 048642 135 SSSAWGKGRFGEDIIIANLDTGVWPESKSFSDEGYGPVPSRWKGTCQNSTKEGVRCNRKLIGARYFNRAYAAYVKQHNIS 214 (782)
Q Consensus 135 ~~~~w~~~~~G~gV~VaVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~~~ki~g~~~~~~~~~~~~~~~~~~ 214 (782)
+..+|+.. +|+||+|||||||||++||+|.++ ++..++|.++
T Consensus 20 ~~~aw~~~-~G~gv~VaViDtGvd~~h~~l~~~--------------------------~~~~~~~~~~----------- 61 (279)
T 1thm_A 20 APQAWDIA-EGSGAKIAIVDTGVQSNHPDLAGK--------------------------VVGGWDFVDN----------- 61 (279)
T ss_dssp HHHHHTTC-CCTTCEEEEEESCCCTTCTTTTTT--------------------------EEEEEETTTT-----------
T ss_pred hHHHHhcC-CCCCCEEEEEccCCCCCCcchhcC--------------------------ccccccccCC-----------
Confidence 56889887 799999999999999999999753 3333444321
Q ss_pred ccCCCCCCCCCCccchhhhhhhccCCCCccccccCCCcceecCccccccccccccCCCCCCCCChhHHHHHHHHhhhCCC
Q 048642 215 VNFNNTARDHEGHGTHTLSTAGGNLVPGVNVFGMGNGTAKGGSPKARVAAYKVCWPQVSDGQCFDADILKGFDMAIHDGV 294 (782)
Q Consensus 215 ~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~l~~~kv~~~~~~~g~~~~~~i~~ai~~a~~~g~ 294 (782)
...+.|..||||||||||+|...+ ...+.||||+|+|+.+|+++.. |.+..+++++||+||+++|+
T Consensus 62 ---~~~~~d~~gHGT~vAgiia~~~~n--------~~g~~GvAp~a~l~~~~v~~~~---g~~~~~~~~~ai~~a~~~g~ 127 (279)
T 1thm_A 62 ---DSTPQNGNGHGTHCAGIAAAVTNN--------STGIAGTAPKASILAVRVLDNS---GSGTWTAVANGITYAADQGA 127 (279)
T ss_dssp ---BSCCCCSSSHHHHHHHHHHCCCSS--------SSSCCCSSTTCEEEEEECSCTT---SCCCHHHHHHHHHHHHHTTC
T ss_pred ---CCCCCCCCCcHHHHHHHHhCccCC--------CCccEEeCCCCEEEEEEeeCCC---CCccHHHHHHHHHHHHHCCC
Confidence 234578899999999999998532 2235899999999999999876 46788899999999999999
Q ss_pred eEEEEccCCCCCCCCCCHHHHHHHHHHhcCcEEEEecCCCCCCCCcccCCCCcEEEEccccCCccceeeEEecCCeEEee
Q 048642 295 DVISVSLGGDPADYFNDGTAIGAFHAVKHGIVVVCSAANSGPELGTVTNVSPWIITVGASTLDREFQNFVELRNGQRFKG 374 (782)
Q Consensus 295 dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVgas~~~~~~~~~~~~~~~~~~~g 374 (782)
+|||||||... ....+..++.++.++|+++|+||||+|.....++...+++|+|||++.+
T Consensus 128 ~Vin~S~G~~~---~~~~l~~ai~~a~~~gvlvV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~~----------------- 187 (279)
T 1thm_A 128 KVISLSLGGTV---GNSGLQQAVNYAWNKGSVVVAAAGNAGNTAPNYPAYYSNAIAVASTDQN----------------- 187 (279)
T ss_dssp SEEEECCCBSS---CCHHHHHHHHHHHHTTCEEEEECCSSSSCCCCBTTTSTTEEEEEEECTT-----------------
T ss_pred CEEEEecCCCC---CCHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCcccCCCeEEEEEeCCC-----------------
Confidence 99999999872 3456788888999999999999999998777777778999999985421
Q ss_pred eeccCCCCCCcccceEecccccccCCCcccccccCCCCCCCCCccceEEEEeeCCcchhhhhHHHHHcCceEEEEeccCC
Q 048642 375 TSLSKSLPNDTFYPLITGLQAKAANADDTAASLCKNGALDHEKVKGKILVCLRGDTARVDKGRQAAVAGAVGMILCNDKS 454 (782)
Q Consensus 375 ~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~ 454 (782)
T Consensus 188 -------------------------------------------------------------------------------- 187 (279)
T 1thm_A 188 -------------------------------------------------------------------------------- 187 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCccccCCCcccEEEEehhhHHHHHHHHhcCCCceEEEecCeeeccCCCCCccccccCCCCCCCCCCCcCCeEEeCCce
Q 048642 455 SGNEITADPHFLPASQITYKDGVKVLDYIKSSDNPMGYITSPSTYLNAKPSPFMASFSSAGPNKITPEILKPDITAPGVN 534 (782)
Q Consensus 455 ~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~ 534 (782)
+.++.||++||.. ||+|||++
T Consensus 188 ---------------------------------------------------~~~~~fS~~G~~~--------dv~APG~~ 208 (279)
T 1thm_A 188 ---------------------------------------------------DNKSSFSTYGSWV--------DVAAPGSS 208 (279)
T ss_dssp ---------------------------------------------------SCBCTTCCCCTTC--------CEEEECSS
T ss_pred ---------------------------------------------------CCcCCcCCCCCce--------EEEEcCCC
Confidence 4678999999865 99999999
Q ss_pred EEEeecCCCCCCCCCCCCCCcceeeeccccchhhHHHHHHHHHHhhCCCCCHHHHHHHHHhccccccCCCCCCCCCCCCC
Q 048642 535 IIAAFTGAIGATELPYDTRRIPYNIMSGTSMSCPHVAGVVGLLKTAHPDWSPSAIRSAIMTTARTRDNTANPMRDGSFKK 614 (782)
Q Consensus 535 I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~sp~~ik~~L~~TA~~~~~~g~~~~~~~~~~ 614 (782)
|+++++.. .|..++|||||||||||++||| ++|.+++++||++|++||+++...+
T Consensus 209 i~s~~~~~-------------~~~~~sGTS~AaP~VaG~aAll--~~p~~t~~~v~~~L~~ta~~~~~~~---------- 263 (279)
T 1thm_A 209 IYSTYPTS-------------TYASLSGTSMATPHVAGVAGLL--ASQGRSASNIRAAIENTADKISGTG---------- 263 (279)
T ss_dssp EEEEETTT-------------EEEEECSHHHHHHHHHHHHHHH--HTTTCCHHHHHHHHHHTCBCCTTBT----------
T ss_pred eEEEeCCC-------------CEEEcccHHHHHHHHHHHHHHH--HCCCcCHHHHHHHHHHhCccCCCCC----------
Confidence 99999764 8999999999999999999999 5899999999999999999875332
Q ss_pred CCCCcccccccCccccCC
Q 048642 615 ATPFSYGSGHIRPNRAMD 632 (782)
Q Consensus 615 ~~~~~~G~G~vd~~~A~~ 632 (782)
..||+|+||+.+|++
T Consensus 264 ---~~~G~G~vn~~~A~~ 278 (279)
T 1thm_A 264 ---TYWAKGRVNAYKAVQ 278 (279)
T ss_dssp ---TTBSSEECCHHHHHH
T ss_pred ---ccccCCeeCHHHHhc
Confidence 478999999999985
No 17
>2z30_A TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 3a3o_A 3a3n_A 2zrq_A 2z57_A 2z56_A 2z58_A 3a3p_A 2z2x_A* 2z2y_A
Probab=100.00 E-value=1.7e-51 Score=443.40 Aligned_cols=273 Identities=29% Similarity=0.397 Sum_probs=222.8
Q ss_pred cccccCCcccCCCccccCCCCC--ceEEEEecCCcCcCCCCccCCCCCCCCCCccccccCCCCCcccccccccccccchh
Q 048642 125 MLLENNGVIHSSSAWGKGRFGE--DIIIANLDTGVWPESKSFSDEGYGPVPSRWKGTCQNSTKEGVRCNRKLIGARYFNR 202 (782)
Q Consensus 125 ~g~~~~~~~~~~~~w~~~~~G~--gV~VaVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~~~ki~g~~~~~~ 202 (782)
|++..++ +..+|+.+ +|+ ||+|||||||||++||+|.++ +....+|..
T Consensus 10 W~l~~i~---~~~aw~~~-~G~~~gv~VaViDtGid~~Hp~l~~~--------------------------~~~~~~~~~ 59 (320)
T 2z30_A 10 WGIERVK---APSVWSIT-DGSVSVIQVAVLDTGVDYDHPDLAAN--------------------------IAWCVSTLR 59 (320)
T ss_dssp HHHHHTT---CGGGTTTC-CSCCTTCEEEEEESCBCTTCTTTGGG--------------------------EEEEEECGG
T ss_pred CChhhcC---hHHHHHhc-CCCcCCeEEEEECCCCCCCChhHhcc--------------------------cccCccccC
Confidence 4554443 67899988 999 999999999999999999753 323333332
Q ss_pred hHhhhcccccccccCCCCCCCCCCccchhhhhhhccCCCCccccccCCCcceecCccccccccccccCCCCCCCCChhHH
Q 048642 203 AYAAYVKQHNISVNFNNTARDHEGHGTHTLSTAGGNLVPGVNVFGMGNGTAKGGSPKARVAAYKVCWPQVSDGQCFDADI 282 (782)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~l~~~kv~~~~~~~g~~~~~~i 282 (782)
+.... +.....|..||||||||||+|.. ++..+.||||+|+|+.+|+++.. |.+..+++
T Consensus 60 ~~~~~---------~~~~~~d~~gHGT~vAgiia~~~---------n~~g~~GvAp~a~l~~~~v~~~~---g~~~~~~i 118 (320)
T 2z30_A 60 GKVST---------KLRDCADQNGHGTHVIGTIAALN---------NDIGVVGVAPGVQIYSVRVLDAR---GSGSYSDI 118 (320)
T ss_dssp GCCBC---------CHHHHBCSSSHHHHHHHHHHCCS---------SSBSCCCSSTTCEEEEEECSCTT---SEEEHHHH
T ss_pred CccCC---------CCCCCCCCCCCHHHHHHHHHccc---------CCCceEeeCCCCEEEEEEeeCCC---CCccHHHH
Confidence 21000 01123578999999999999973 12335899999999999999876 46788899
Q ss_pred HHHHHHhhhC--------------------CCeEEEEccCCCCCCCCCCHHHHHHHHHHhcCcEEEEecCCCCCCCCccc
Q 048642 283 LKGFDMAIHD--------------------GVDVISVSLGGDPADYFNDGTAIGAFHAVKHGIVVVCSAANSGPELGTVT 342 (782)
Q Consensus 283 ~~ai~~a~~~--------------------g~dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~ 342 (782)
++||+||+++ +++|||||||... ....+..++.++.++|++||+||||+|.....++
T Consensus 119 ~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~Vin~S~G~~~---~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~P 195 (320)
T 2z30_A 119 AIGIEQAILGPDGVADKDGDGIIAGDPDDDAAEVISMSLGGPA---DDSYLYDMIIQAYNAGIVIVAASGNEGAPSPSYP 195 (320)
T ss_dssp HHHHHHHHHTTTTCSCTTSSSCCTTCTTSCCCSEEEECEEBSC---CCHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBT
T ss_pred HHHHHHHHhCcccccccccccccccccccCCceEEEecCCCCC---CCHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCc
Confidence 9999999987 9999999999873 2456777888899999999999999998777777
Q ss_pred CCCCcEEEEccccCCccceeeEEecCCeEEeeeeccCCCCCCcccceEecccccccCCCcccccccCCCCCCCCCccceE
Q 048642 343 NVSPWIITVGASTLDREFQNFVELRNGQRFKGTSLSKSLPNDTFYPLITGLQAKAANADDTAASLCKNGALDHEKVKGKI 422 (782)
Q Consensus 343 ~~~p~vitVgas~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gki 422 (782)
...|++|+|||++.
T Consensus 196 a~~~~vi~Vga~~~------------------------------------------------------------------ 209 (320)
T 2z30_A 196 AAYPEVIAVGAIDS------------------------------------------------------------------ 209 (320)
T ss_dssp TTSTTEEEEEEECT------------------------------------------------------------------
T ss_pred ccCCCeEEEEeeCC------------------------------------------------------------------
Confidence 78899999998542
Q ss_pred EEEeeCCcchhhhhHHHHHcCceEEEEeccCCCCCccccCCCcccEEEEehhhHHHHHHHHhcCCCceEEEecCeeeccC
Q 048642 423 LVCLRGDTARVDKGRQAAVAGAVGMILCNDKSSGNEITADPHFLPASQITYKDGVKVLDYIKSSDNPMGYITSPSTYLNA 502 (782)
Q Consensus 423 vl~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~ 502 (782)
T Consensus 210 -------------------------------------------------------------------------------- 209 (320)
T 2z30_A 210 -------------------------------------------------------------------------------- 209 (320)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCccccccCCCCCCCCCCCcCCeEEeCCceEEEeecCCCCCCCCCCCCCCcceeeeccccchhhHHHHHHHHHHhhC-
Q 048642 503 KPSPFMASFSSAGPNKITPEILKPDITAPGVNIIAAFTGAIGATELPYDTRRIPYNIMSGTSMSCPHVAGVVGLLKTAH- 581 (782)
Q Consensus 503 ~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~- 581 (782)
.+.++.||++|| +|+|||++|+++++.+ .|..++|||||||||||++|||+|++
T Consensus 210 --~~~~~~~S~~g~----------~v~APG~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~~ 264 (320)
T 2z30_A 210 --NDNIASFSNRQP----------EVSAPGVDILSTYPDD-------------SYETLMGTAMATPHVSGVVALIQAAYY 264 (320)
T ss_dssp --TSCBCTTSCSSC----------SEEEECSSEEEEETTT-------------EEEEECSHHHHHHHHHHHHHHHHHHHH
T ss_pred --CCCcCcccCCCC----------CEEeCCCCeEEeccCC-------------CeEeccCHHHHHHHHHHHHHHHHHhch
Confidence 146789999997 7899999999999764 89999999999999999999999999
Q ss_pred ------------CCCCHHHHHHHHHhccccccCCCCCCCCCCCCCCCCCcccccccCccccCCC
Q 048642 582 ------------PDWSPSAIRSAIMTTARTRDNTANPMRDGSFKKATPFSYGSGHIRPNRAMDP 633 (782)
Q Consensus 582 ------------p~~sp~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~G~G~vd~~~A~~~ 633 (782)
|.+++.+||++|++||+++... ..+..||+|+||+.+|++.
T Consensus 265 ~~~~~~~~~~~~p~lt~~~v~~~L~~ta~~~~~~-----------g~~~~~G~G~vd~~~A~~~ 317 (320)
T 2z30_A 265 QKYGKILPVGTFDDISKNTVRGILHITADDLGPT-----------GWDADYGYGVVRAALAVQA 317 (320)
T ss_dssp HHHSSCCCCCCTTCCSTTSHHHHHHHHSBCCSSS-----------SSBTTTBTCBCCHHHHHHH
T ss_pred hhcccccccccCCCCCHHHHHHHHHhhCccCCCC-----------CCCCCcCCceeCHHHHHHH
Confidence 9999999999999999987432 2466899999999999864
No 18
>3zxy_A Subtilisin-like protein; hydrolase; 1.58A {Prochloron didemni} PDB: 3zxx_A
Probab=100.00 E-value=2.2e-51 Score=435.24 Aligned_cols=266 Identities=22% Similarity=0.246 Sum_probs=211.5
Q ss_pred CCCC-CceEEEEecCCcCcCCCCccCCCCCCCCCCccccccCCCCCcccccccccccccchhhHhhhcccccccccCCCC
Q 048642 142 GRFG-EDIIIANLDTGVWPESKSFSDEGYGPVPSRWKGTCQNSTKEGVRCNRKLIGARYFNRAYAAYVKQHNISVNFNNT 220 (782)
Q Consensus 142 ~~~G-~gV~VaVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~~~ki~g~~~~~~~~~~~~~~~~~~~~~~~~ 220 (782)
..+| +||+|||||||||++||+|+++ .+....+... . ....
T Consensus 3 ~l~G~~gV~VaViDtGid~~Hpdl~g~--------------------------~~~~~~~~~~---~---------~~~~ 44 (282)
T 3zxy_A 3 SLKGDHNIRVAILDGPVDIAHPCFQGA--------------------------DLTVLPTLAP---T---------AARS 44 (282)
T ss_dssp TCCCCTTSEEEEEESCCCTTSGGGTTC--------------------------EEEECCCSSC---C---------CCCT
T ss_pred CCcCCCCCEEEEEcCCCCCCChhHCCC--------------------------eeecCcCCCC---C---------CCCC
Confidence 3478 6999999999999999999754 1111111100 0 1122
Q ss_pred CCCCCCccchhhhhhhccCCCCccccccCCCcceecCccccccccccccCCCCCCCCChhHHHHHHHHhhhCCCeEEEEc
Q 048642 221 ARDHEGHGTHTLSTAGGNLVPGVNVFGMGNGTAKGGSPKARVAAYKVCWPQVSDGQCFDADILKGFDMAIHDGVDVISVS 300 (782)
Q Consensus 221 ~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~l~~~kv~~~~~~~g~~~~~~i~~ai~~a~~~g~dVIn~S 300 (782)
..|.+||||||||||+|+. +..+.||||+|+|+.+|++.+.. +......+++||+||++++++|||||
T Consensus 45 d~~~~gHGT~VAGiiag~~----------~~~~~GvAp~a~l~~~kv~~~~~--~~~~~~~i~~ai~~a~~~~~~Vin~S 112 (282)
T 3zxy_A 45 DGFMSAHGTHVASIIFGQP----------ETSVPGIAPQCRGLIVPIFSDDR--RRITQLDLARGIERAVNAGAHIINIS 112 (282)
T ss_dssp TCHHHHHHHHHHHHHHCCT----------TSSSCCSSTTSEEEEEECSCSSS--SCCCHHHHHHHHHHHHHTTCSEEEEC
T ss_pred CCCCCCcccceeehhhccC----------CceeeeeccccceEeeEeecccc--ccchHHHHHHHHHHhhccCCeEEecc
Confidence 3356799999999999974 22458999999999999986553 24677889999999999999999999
Q ss_pred cCCCC-CCCCCCHHHHHHHHHHhcCcEEEEecCCCCCCCCcccCCCCcEEEEccccCCccceeeEEecCCeEEeeeeccC
Q 048642 301 LGGDP-ADYFNDGTAIGAFHAVKHGIVVVCSAANSGPELGTVTNVSPWIITVGASTLDREFQNFVELRNGQRFKGTSLSK 379 (782)
Q Consensus 301 lG~~~-~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVgas~~~~~~~~~~~~~~~~~~~g~~~~~ 379 (782)
||... .......+..++..+.++|+++|+||||+|......+...+++|+|||++.
T Consensus 113 ~G~~~~~~~~~~~~~~ai~~a~~~gi~vV~AaGN~g~~~~~~Pa~~~~vi~Vga~~~----------------------- 169 (282)
T 3zxy_A 113 GGELTDFGEADGWLENAVSLCRQNNVLLVAAAGNNGCDCLHVPAALPAVLAVGAMDD----------------------- 169 (282)
T ss_dssp CCEEESSSCCCHHHHHHHHHHHHTTCEEEEECCSSCSSCEEETTTSTTCEEEEEECT-----------------------
T ss_pred CccccccccccHHHHHHHHHHhhcCceEEEecccCCCccccCccccceeEEEEEEcC-----------------------
Confidence 99762 333455677788889999999999999999877777778899999998542
Q ss_pred CCCCCcccceEecccccccCCCcccccccCCCCCCCCCccceEEEEeeCCcchhhhhHHHHHcCceEEEEeccCCCCCcc
Q 048642 380 SLPNDTFYPLITGLQAKAANADDTAASLCKNGALDHEKVKGKILVCLRGDTARVDKGRQAAVAGAVGMILCNDKSSGNEI 459 (782)
Q Consensus 380 ~~~~~~~~pl~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~ 459 (782)
T Consensus 170 -------------------------------------------------------------------------------- 169 (282)
T 3zxy_A 170 -------------------------------------------------------------------------------- 169 (282)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCCcccEEEEehhhHHHHHHHHhcCCCceEEEecCeeeccCCCCCccccccCCCCCCCCCCCcCCeEEeCCceEEEee
Q 048642 460 TADPHFLPASQITYKDGVKVLDYIKSSDNPMGYITSPSTYLNAKPSPFMASFSSAGPNKITPEILKPDITAPGVNIIAAF 539 (782)
Q Consensus 460 ~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~sa~ 539 (782)
.+.++.||+||+. ..||||+|||++|++++
T Consensus 170 ---------------------------------------------~~~~~~~S~~~~~-----~~~~di~ApG~~i~s~~ 199 (282)
T 3zxy_A 170 ---------------------------------------------HGHPLDFSNWGST-----YEQQGILAPGEDILGAK 199 (282)
T ss_dssp ---------------------------------------------TSCBCSSSCCCHH-----HHHHEEEEECSSEEEEC
T ss_pred ---------------------------------------------CCccccccCCCCC-----ccccceeccCcceeeec
Confidence 2467889999974 46889999999999999
Q ss_pred cCCCCCCCCCCCCCCcceeeeccccchhhHHHHHHHHHHhhC----CCCCHHHHHHHHHhccccccCCCCCCCCCCCCCC
Q 048642 540 TGAIGATELPYDTRRIPYNIMSGTSMSCPHVAGVVGLLKTAH----PDWSPSAIRSAIMTTARTRDNTANPMRDGSFKKA 615 (782)
Q Consensus 540 ~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~----p~~sp~~ik~~L~~TA~~~~~~g~~~~~~~~~~~ 615 (782)
+.+ .|..++|||||||||||++|||+|++ |.++|++||++|++||++++... +.
T Consensus 200 ~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~~~~vk~~L~~tA~~~~~~~---------~~ 257 (282)
T 3zxy_A 200 PGG-------------GTERLSGTAFATPIVSGVAALLLSEQVRRGETPDPQKVRQLLLQSALPCDDDA---------PE 257 (282)
T ss_dssp TTS-------------CEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHCBCC---------------
T ss_pred CCC-------------ceeecCCCcccchHHHHHHHHHHHHhHhhCCCCCHHHHHHHHHhhCeeCCCCC---------CC
Confidence 875 89999999999999999999999875 78999999999999998875321 33
Q ss_pred CCCcccccccCccccCC
Q 048642 616 TPFSYGSGHIRPNRAMD 632 (782)
Q Consensus 616 ~~~~~G~G~vd~~~A~~ 632 (782)
....+|+|+||+.+|++
T Consensus 258 ~~~~~G~G~ln~~~A~~ 274 (282)
T 3zxy_A 258 QARRCLAGRLNVSGAFT 274 (282)
T ss_dssp -CGGGTTCBCCHHHHHH
T ss_pred ccCceeeeEeCHHHHHH
Confidence 46789999999999986
No 19
>2ixt_A 36KDA protease; serine protease, sphericase, subtilisin like protease, hydrolase; 0.8A {Bacillus sphaericus} SCOP: c.41.1.1 PDB: 3d43_A 1ea7_A* 2gko_A*
Probab=100.00 E-value=3.3e-50 Score=432.28 Aligned_cols=282 Identities=27% Similarity=0.348 Sum_probs=223.8
Q ss_pred CCCccccCCCCCceEEEEecCCcCcCCCCccCCCCCCCCCCccccccCCCCCcccccccccccccchhhHhhhccccccc
Q 048642 135 SSSAWGKGRFGEDIIIANLDTGVWPESKSFSDEGYGPVPSRWKGTCQNSTKEGVRCNRKLIGARYFNRAYAAYVKQHNIS 214 (782)
Q Consensus 135 ~~~~w~~~~~G~gV~VaVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~~~ki~g~~~~~~~~~~~~~~~~~~ 214 (782)
+..+|..+.+|+||+|||||||||++||+|.++ +...++|......
T Consensus 15 ~~~~w~~~~~G~gv~VaViDtGvd~~H~~l~~~--------------------------~~~~~~~~~~~~~-------- 60 (310)
T 2ixt_A 15 NNDTLTSTTGGSGINIAVLDTGVNTSHPDLVNN--------------------------VEQCKDFTGATTP-------- 60 (310)
T ss_dssp TCTTCCCCCCCTTCEEEEEESCCCTTCTTTTTT--------------------------EEEEEESSSSSSC--------
T ss_pred chhhhhccCCCCCcEEEEEecCCCCCCHHHhhc--------------------------ccccccccCCCCC--------
Confidence 678999999999999999999999999999753 3233334321000
Q ss_pred ccCCCCCCCCCCccchhhhhhhccCCCCccccccCCCcceecCccccccccccccCCCCCCCCChhHHHHHHHHhhhCCC
Q 048642 215 VNFNNTARDHEGHGTHTLSTAGGNLVPGVNVFGMGNGTAKGGSPKARVAAYKVCWPQVSDGQCFDADILKGFDMAIHDGV 294 (782)
Q Consensus 215 ~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~l~~~kv~~~~~~~g~~~~~~i~~ai~~a~~~g~ 294 (782)
......|..||||||||||+|...+ +...+.||||+|+|+.+|++... |.+..+++++||+|++++++
T Consensus 61 --~~~~~~d~~gHGT~vAgiia~~~~~-------n~~g~~GvAp~a~l~~~~v~~~~---g~~~~~~~~~ai~~a~~~~~ 128 (310)
T 2ixt_A 61 --INNSCTDRNGHGTHVAGTALADGGS-------DQAGIYGVAPDADLWAYKVLLDS---GSGYSDDIAAAIRHAADQAT 128 (310)
T ss_dssp --EETCCCCSSSHHHHHHHHHHCBCCT-------TSCSCBCSCTTSEEEEEECSCTT---SCCCHHHHHHHHHHHHHHHH
T ss_pred --CCCCCCCCCCCHHHHHHHHhccCCC-------CCCceEEECCCCEEEEEEEEcCC---CCCcHHHHHHHHHHHHHhhh
Confidence 1224568899999999999998421 23346899999999999999876 45788999999999999988
Q ss_pred -----eEEEEccCCCCCCCCCCHHHHHHHHHHhcCcEEEEecCCCCCCC--CcccCCCCcEEEEccccCCccceeeEEec
Q 048642 295 -----DVISVSLGGDPADYFNDGTAIGAFHAVKHGIVVVCSAANSGPEL--GTVTNVSPWIITVGASTLDREFQNFVELR 367 (782)
Q Consensus 295 -----dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~--~~~~~~~p~vitVgas~~~~~~~~~~~~~ 367 (782)
+|||||||... ....+..++.++.++|++||+||||+|... ..++...+++|+|||++....
T Consensus 129 ~~~~~~Vin~S~G~~~---~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~~~Pa~~~~vi~Vga~~~~~~-------- 197 (310)
T 2ixt_A 129 ATGTKTIISMSLGSSA---NNSLISSAVNYAYSKGVLIVAAAGNSGYSQGTIGYPGALPNAIAVAALENVQQ-------- 197 (310)
T ss_dssp HHTCCEEEEECCCBSS---CCHHHHHHHHHHHHTTCEEEEECCSCCSSTTCCCBTTTSTTSEEEEEEEEEEE--------
T ss_pred ccCCCeEEEEcCCCCC---CCHHHHHHHHHHHhCCcEEEEcCCCCCCCCCCCCCcccCCCeeEEEecccccc--------
Confidence 99999999873 245677888889999999999999999763 344556799999998542100
Q ss_pred CCeEEeeeeccCCCCCCcccceEecccccccCCCcccccccCCCCCCCCCccceEEEEeeCCcchhhhhHHHHHcCceEE
Q 048642 368 NGQRFKGTSLSKSLPNDTFYPLITGLQAKAANADDTAASLCKNGALDHEKVKGKILVCLRGDTARVDKGRQAAVAGAVGM 447 (782)
Q Consensus 368 ~~~~~~g~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~ 447 (782)
T Consensus 198 -------------------------------------------------------------------------------- 197 (310)
T 2ixt_A 198 -------------------------------------------------------------------------------- 197 (310)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEeccCCCCCccccCCCcccEEEEehhhHHHHHHHHhcCCCceEEEecCeeeccCCCCC--ccccccCCCCCCCC----C
Q 048642 448 ILCNDKSSGNEITADPHFLPASQITYKDGVKVLDYIKSSDNPMGYITSPSTYLNAKPSP--FMASFSSAGPNKIT----P 521 (782)
Q Consensus 448 i~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~--~~a~fSs~Gp~~~~----~ 521 (782)
.+ .++.||++||.... .
T Consensus 198 ---------------------------------------------------------~g~~~~~~~S~~G~~~~~g~~~~ 220 (310)
T 2ixt_A 198 ---------------------------------------------------------NGTYRVADYSSRGYISTAGDYVI 220 (310)
T ss_dssp ---------------------------------------------------------TTEEEECTTSCCCCTTTTTSSSC
T ss_pred ---------------------------------------------------------CCCeeeccccCCCCccCCccccc
Confidence 12 67889999985321 1
Q ss_pred CCcCCeEEeCCceEEEeecCCCCCCCCCCCCCCcceeeeccccchhhHHHHHHHHHHhhCCCCCHHHHHHHHHhcccccc
Q 048642 522 EILKPDITAPGVNIIAAFTGAIGATELPYDTRRIPYNIMSGTSMSCPHVAGVVGLLKTAHPDWSPSAIRSAIMTTARTRD 601 (782)
Q Consensus 522 ~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~sp~~ik~~L~~TA~~~~ 601 (782)
.+.||||+|||++|+++++.+ .|..++|||||||||||++|||+|++|+|++.+||++|++||++++
T Consensus 221 ~~~~~di~ApG~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~ 287 (310)
T 2ixt_A 221 QEGDIEISAPGSSVYSTWYNG-------------GYNTISGTSMATPHVSGLAAKIWAENPSLSNTQLRSNLQERAKSVD 287 (310)
T ss_dssp CTTCCCEEEECSSEEEECTTS-------------SEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHHHHTSC
T ss_pred cCCCeeEECCCCCEeeecCCC-------------CEEeeccHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhhCcccC
Confidence 235999999999999998764 8999999999999999999999999999999999999999999876
Q ss_pred CCCCCCCCCCCCCCCCCcccccccCc
Q 048642 602 NTANPMRDGSFKKATPFSYGSGHIRP 627 (782)
Q Consensus 602 ~~g~~~~~~~~~~~~~~~~G~G~vd~ 627 (782)
..+. ....+..+..+|||++|+
T Consensus 288 ~~~~----~~a~~g~d~~~G~G~~~v 309 (310)
T 2ixt_A 288 IKGG----YGAAIGDDYASGFGFARV 309 (310)
T ss_dssp CCBS----TTCCSSSBTTTBTCBCCC
T ss_pred CCCC----cccccCCccccccceeec
Confidence 4321 112355788999999986
No 20
>4h6w_A N-terminal cyanobactin protease; hydrolase; 2.45A {Planktothrix agardhii nies-596}
Probab=100.00 E-value=5e-51 Score=438.10 Aligned_cols=273 Identities=22% Similarity=0.254 Sum_probs=220.0
Q ss_pred CCccccCCCCCceEEEEecCCcCcCCCCccCCCCCCCCCCccccccCCCCCcccccccccccccchhhHhhhcccccccc
Q 048642 136 SSAWGKGRFGEDIIIANLDTGVWPESKSFSDEGYGPVPSRWKGTCQNSTKEGVRCNRKLIGARYFNRAYAAYVKQHNISV 215 (782)
Q Consensus 136 ~~~w~~~~~G~gV~VaVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~~~ki~g~~~~~~~~~~~~~~~~~~~ 215 (782)
.++|+.+..++||+|||||||||++||+|.++ .+.+..++..+
T Consensus 11 ~~aW~~~~G~~gV~VaViDtGid~~Hpdl~g~-------------------------~~~~~~~~~~~------------ 53 (306)
T 4h6w_A 11 KKLWSETRGDPKICVAVLDGIVDQNHPCFIGA-------------------------DLTRLPSLVSG------------ 53 (306)
T ss_dssp HHHHHHCSCCTTCEEEEESSCCCTTSGGGTTC-------------------------EEEECC-----------------
T ss_pred HHHHhhhCCCCCCEEEEEcCCCCCCChhHcCC-------------------------cccCCCcccCC------------
Confidence 47999987779999999999999999999754 12222222221
Q ss_pred cCCCCCCCCCCccchhhhhhhccCCCCccccccCCCcceecCccccccccccccCCCCCCCCChhHHHHHHHHhhhCCCe
Q 048642 216 NFNNTARDHEGHGTHTLSTAGGNLVPGVNVFGMGNGTAKGGSPKARVAAYKVCWPQVSDGQCFDADILKGFDMAIHDGVD 295 (782)
Q Consensus 216 ~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~l~~~kv~~~~~~~g~~~~~~i~~ai~~a~~~g~d 295 (782)
+.....|..||||||||||+|+. ++.+.||||+|+|+.+|++.+.. +.+....+++||+||++++++
T Consensus 54 -~~~~~~d~~gHGThVAGiiag~~----------~~~~~GVAp~a~l~~~kv~~~~~--~~~~~~~i~~ai~~a~~~g~~ 120 (306)
T 4h6w_A 54 -EANANGSMSTHGTHVASIIFGQH----------DSPVTGIAPQCRGLIVPVFADES--LKLSQLDLSRAIEQAVNNGAN 120 (306)
T ss_dssp ------CCCCHHHHHHHHHHHCCT----------TSSSCCSSTTSEEEECCCCCSSS--CCCCHHHHHHHHHHHHHTTCS
T ss_pred -CCCCCCCCCCchHHHHHHHHccc----------cCCcceeccccccceeecccccc--ccchHHHHHHHHHHhhcccce
Confidence 12234577899999999999974 23458999999999999986552 356788899999999999999
Q ss_pred EEEEccCCC-CCCCCCCHHHHHHHHHHhcCcEEEEecCCCCCCCCcccCCCCcEEEEccccCCccceeeEEecCCeEEee
Q 048642 296 VISVSLGGD-PADYFNDGTAIGAFHAVKHGIVVVCSAANSGPELGTVTNVSPWIITVGASTLDREFQNFVELRNGQRFKG 374 (782)
Q Consensus 296 VIn~SlG~~-~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVgas~~~~~~~~~~~~~~~~~~~g 374 (782)
|||+|||.. ........+..++..+.++|+++|+||||+|.....++...+++|+|||++..
T Consensus 121 vi~~s~g~~~~~~~~~~~~~~ai~~a~~~gi~vvaaagn~g~~~~~~Pa~~~~vi~Vga~~~~----------------- 183 (306)
T 4h6w_A 121 IINVSAGQLTDAGEADTWLEKAIQLCQENNVLLIAATGNDGCECLHVPASLPTVLAVGAMDDQ----------------- 183 (306)
T ss_dssp EEEECCCEEESSSCCCHHHHHHHHHHHHTTCEEEEECCSSSSBCEEETTTSTTCEEEEEECTT-----------------
T ss_pred eeeccccccccCCCccHHHHHHHHHHHHcCCeEEEecCCCCcccccccccCCcceEEEEecCC-----------------
Confidence 999999976 23344566788888999999999999999998776777778999999985432
Q ss_pred eeccCCCCCCcccceEecccccccCCCcccccccCCCCCCCCCccceEEEEeeCCcchhhhhHHHHHcCceEEEEeccCC
Q 048642 375 TSLSKSLPNDTFYPLITGLQAKAANADDTAASLCKNGALDHEKVKGKILVCLRGDTARVDKGRQAAVAGAVGMILCNDKS 454 (782)
Q Consensus 375 ~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~ 454 (782)
T Consensus 184 -------------------------------------------------------------------------------- 183 (306)
T 4h6w_A 184 -------------------------------------------------------------------------------- 183 (306)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCccccCCCcccEEEEehhhHHHHHHHHhcCCCceEEEecCeeeccCCCCCccccccCCCCCCCCCCCcCCeEEeCCce
Q 048642 455 SGNEITADPHFLPASQITYKDGVKVLDYIKSSDNPMGYITSPSTYLNAKPSPFMASFSSAGPNKITPEILKPDITAPGVN 534 (782)
Q Consensus 455 ~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~ 534 (782)
+.++.||++|+. ..||||+|||++
T Consensus 184 ---------------------------------------------------~~~~~~s~~g~~-----~~~~di~APG~~ 207 (306)
T 4h6w_A 184 ---------------------------------------------------GKPVDFSNWGDA-----YQKQGILAPGKD 207 (306)
T ss_dssp ---------------------------------------------------SCBCSSSCBCHH-----HHHHEEEEECSS
T ss_pred ---------------------------------------------------CCccccccccCC-----cCcceeecCCcC
Confidence 367789999964 468999999999
Q ss_pred EEEeecCCCCCCCCCCCCCCcceeeeccccchhhHHHHHHHHHHhh----CCCCCHHHHHHHHHhccccccCCCCCCCCC
Q 048642 535 IIAAFTGAIGATELPYDTRRIPYNIMSGTSMSCPHVAGVVGLLKTA----HPDWSPSAIRSAIMTTARTRDNTANPMRDG 610 (782)
Q Consensus 535 I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~----~p~~sp~~ik~~L~~TA~~~~~~g~~~~~~ 610 (782)
|+++.+.+ .|..++|||||||||||++|||+++ +|.++|+|||++|++||+++...+
T Consensus 208 i~s~~~~~-------------~~~~~sGTS~AaP~VaG~~All~s~~~~~~p~~t~~~v~~~L~~tA~~~~~~~------ 268 (306)
T 4h6w_A 208 ILGAKPNG-------------GTIRLSGTSFATPIVSGVAALLLSLQIKRGEKPDPQKVKNALLASATPCNPKD------ 268 (306)
T ss_dssp EEEECTTS-------------CEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHTCBCCCTTT------
T ss_pred cccccCCC-------------ceeccCCCcchhHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHhhCccCCCCC------
Confidence 99998865 8999999999999999999999864 699999999999999999886443
Q ss_pred CCCCCCCCcccccccCccccCCC
Q 048642 611 SFKKATPFSYGSGHIRPNRAMDP 633 (782)
Q Consensus 611 ~~~~~~~~~~G~G~vd~~~A~~~ 633 (782)
......||+|+||+.+|++.
T Consensus 269 ---~~~~~~~G~G~ln~~~Av~~ 288 (306)
T 4h6w_A 269 ---TDDQSRCLMGKLNILDAIEH 288 (306)
T ss_dssp ---CSCGGGGTTCBCCHHHHHHH
T ss_pred ---CCCCCCcceeecCHHHHHHH
Confidence 22346799999999999973
No 21
>2iy9_A SUBA; toxin, shiga, plasmid; 1.8A {Escherichia coli}
Probab=100.00 E-value=2.6e-50 Score=439.77 Aligned_cols=271 Identities=17% Similarity=0.143 Sum_probs=216.8
Q ss_pred CCCccccCCCCC--ceEEEEecCCcCcCCCCccCCCCCCCCCCccccccCCCCCcccccccccccccchhhHhhhccccc
Q 048642 135 SSSAWGKGRFGE--DIIIANLDTGVWPESKSFSDEGYGPVPSRWKGTCQNSTKEGVRCNRKLIGARYFNRAYAAYVKQHN 212 (782)
Q Consensus 135 ~~~~w~~~~~G~--gV~VaVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~~~ki~g~~~~~~~~~~~~~~~~ 212 (782)
...+|+. .+|+ ||+||||||||| +||+|.++ +...++|..+ ..+.
T Consensus 32 ~~~aw~~-~~G~~~gv~VaViDsGid-~Hp~l~~~--------------------------~~~~~~~~~~----~~~~- 78 (347)
T 2iy9_A 32 LTETTMS-LTDKNTPVVVSVVDSGVA-FIGGLSDS--------------------------EFAKFSFTQD----GSPF- 78 (347)
T ss_dssp CCHHHHH-TSCTTSCCEEEEEESCCC-CCGGGTTC--------------------------EEEEEECBTT----CCSS-
T ss_pred hHHHHHH-hcCCCCCCEEEEEcCCCc-CChhhhcC--------------------------cccCCcccCC----CCCC-
Confidence 5689988 8999 999999999999 99999753 3333334321 0000
Q ss_pred ccccCCCCCCCCCCccchhhhhhhccCCCCccccccCCCcceecCccccccccccccCCCCCCCCChhHHHHHHHHhhhC
Q 048642 213 ISVNFNNTARDHEGHGTHTLSTAGGNLVPGVNVFGMGNGTAKGGSPKARVAAYKVCWPQVSDGQCFDADILKGFDMAIHD 292 (782)
Q Consensus 213 ~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~l~~~kv~~~~~~~g~~~~~~i~~ai~~a~~~ 292 (782)
....+.|..||||||||||+|. .| +.||||+|+|+.+|+++.. + . .++++||+||+++
T Consensus 79 ----~~~~~~d~~gHGT~vAgiia~~-------~g-----~~GvAp~a~l~~~~v~~~~---~-~--~~~~~ai~~a~~~ 136 (347)
T 2iy9_A 79 ----PVKKSEALYIHGTAMASLIASR-------YG-----IYGVYPHALISSRRVIPDG---V-Q--DSWIRAIESIMSN 136 (347)
T ss_dssp ----CCSSSHHHHHHHHHHHHHHHCS-------SS-----SCCSSTTCEEEEEECCSSB---C-T--THHHHHHHHHHTC
T ss_pred ----CCCCCCCCCCcHHHHHHHHhcc-------cC-----CcccCCCCEEEEEEEecCC---C-H--HHHHHHHHHHHhh
Confidence 1224567889999999999997 12 3899999999999999765 1 2 2999999999999
Q ss_pred ------CCeEEEEccCCCCCCCCCCHHHHHHHHHHhcCcEEEEecCCCCCC-------CCcccCCCC----------cEE
Q 048642 293 ------GVDVISVSLGGDPADYFNDGTAIGAFHAVKHGIVVVCSAANSGPE-------LGTVTNVSP----------WII 349 (782)
Q Consensus 293 ------g~dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~-------~~~~~~~~p----------~vi 349 (782)
|++|||||||..........+..++..+.++|++||+||||+|.. ...++...+ ++|
T Consensus 137 ~~~~~~~~~Vin~S~G~~~~~~~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~~~~~~~~Pa~~~~~~~~~~~~~~vi 216 (347)
T 2iy9_A 137 VFLAPGEEKIINISGGQKGVASASVWTELLSRMGRNNDRLIVAAVGNDGADIRKLSAQQRIWPAAYHPVSSVNKKQDPVI 216 (347)
T ss_dssp TTSCTTEEEEEEESSCBCCC-CCHHHHHHHHHHHHHTSCEEEEECCBSCCBTTTSCTTTSCBTTTCCCCSHHHHHTCCEE
T ss_pred hhcccCCceEEEeccccCCCCCcCHHHHHHHHHHHhCCeEEEEeCCCCCCCCCCcccccccCCCcCccccccccccCCEE
Confidence 999999999987433456678888889999999999999999975 334455567 999
Q ss_pred EEccccC--CccceeeEEecCCeEEeeeeccCCCCCCcccceEecccccccCCCcccccccCCCCCCCCCccceEEEEee
Q 048642 350 TVGASTL--DREFQNFVELRNGQRFKGTSLSKSLPNDTFYPLITGLQAKAANADDTAASLCKNGALDHEKVKGKILVCLR 427 (782)
Q Consensus 350 tVgas~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~ 427 (782)
+|||++. +...
T Consensus 217 ~Vga~~~~~~g~~------------------------------------------------------------------- 229 (347)
T 2iy9_A 217 RVAALAQYRKGET------------------------------------------------------------------- 229 (347)
T ss_dssp EEEEECCCCTTSC-------------------------------------------------------------------
T ss_pred EEEEcccCCCCce-------------------------------------------------------------------
Confidence 9998654 1100
Q ss_pred CCcchhhhhHHHHHcCceEEEEeccCCCCCccccCCCcccEEEEehhhHHHHHHHHhcCCCceEEEecCeeeccCCCCCc
Q 048642 428 GDTARVDKGRQAAVAGAVGMILCNDKSSGNEITADPHFLPASQITYKDGVKVLDYIKSSDNPMGYITSPSTYLNAKPSPF 507 (782)
Q Consensus 428 g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 507 (782)
....+.
T Consensus 230 --------------------------------------------------------------------------~~~~~~ 235 (347)
T 2iy9_A 230 --------------------------------------------------------------------------PVLHGG 235 (347)
T ss_dssp --------------------------------------------------------------------------CCBCCC
T ss_pred --------------------------------------------------------------------------ecccCC
Confidence 000135
Q ss_pred cccccCCCCCCCCCCCcCCeEEeCCceEEEeecCCCCCCCCCCCCCCcceeeeccccchhhHHHHHHHHHHhhCCCCCHH
Q 048642 508 MASFSSAGPNKITPEILKPDITAPGVNIIAAFTGAIGATELPYDTRRIPYNIMSGTSMSCPHVAGVVGLLKTAHPDWSPS 587 (782)
Q Consensus 508 ~a~fSs~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~sp~ 587 (782)
++.||++||+ ||||+|||++|+++++.+ .|..++|||||||||||++|||+|++|++++.
T Consensus 236 ~~~fS~~G~~-------~~di~APG~~i~s~~~~~-------------~~~~~sGTS~AaP~VaG~aAll~~~~p~lt~~ 295 (347)
T 2iy9_A 236 GITGSRFGNN-------WVDIAAPGQNITFLRPDA-------------KTGTGSGTSEATAIVSGVLAAMTSCNPRATAT 295 (347)
T ss_dssp SSSCBCBCTT-------TCSEEEECSSEEEECTTS-------------CEEEECSHHHHHHHHHHHHHHHHHHCTTSCHH
T ss_pred CCCCCCCCCC-------CCEEEeCCCCeEeecCCC-------------CeEeccchHHHHHHHHHHHHHHHHhCCCCCHH
Confidence 6799999994 679999999999999864 89999999999999999999999999999999
Q ss_pred HHHHHHHhccccccCCCCCCCCCCCCCCCCCcccccccCccccCCC
Q 048642 588 AIRSAIMTTARTRDNTANPMRDGSFKKATPFSYGSGHIRPNRAMDP 633 (782)
Q Consensus 588 ~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~G~G~vd~~~A~~~ 633 (782)
+||++|++||+++...+ +..+|+|+||+.+|++.
T Consensus 296 ~v~~~L~~tA~~~~~~~------------~~~~G~G~ld~~~A~~~ 329 (347)
T 2iy9_A 296 ELKRTLLESADKYPSLV------------DKVTEGRVLNAEKAISM 329 (347)
T ss_dssp HHHHHHHHHSEECGGGT------------TTSGGGEECCHHHHHHH
T ss_pred HHHHHHHHhCccCCCCC------------CccccCCEecHHHHHHH
Confidence 99999999999875432 35899999999999984
No 22
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=100.00 E-value=4.6e-49 Score=472.73 Aligned_cols=361 Identities=24% Similarity=0.263 Sum_probs=251.2
Q ss_pred CCCCCccchhhhhhhccCCCCccccccCCCcceecCccccccccccccCCCCCCCCChhHHHHHHHHhhh-----CCCeE
Q 048642 222 RDHEGHGTHTLSTAGGNLVPGVNVFGMGNGTAKGGSPKARVAAYKVCWPQVSDGQCFDADILKGFDMAIH-----DGVDV 296 (782)
Q Consensus 222 ~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~l~~~kv~~~~~~~g~~~~~~i~~ai~~a~~-----~g~dV 296 (782)
.|++||||||||||||.. ++..+.||||+|+|+.+|+++.... .......++++|.+|++ +|++|
T Consensus 267 ~D~~GHGThVAGIIAa~~---------N~~g~~GVAP~AkI~~vKVld~~~g-~~~t~s~l~~AI~~Aid~a~~~~gadV 336 (1354)
T 3lxu_X 267 GMSSPHGTHVSSIASGNH---------SSRDVDGVAPNAKIVSMTIGDGRLG-SMETGTALVRAMTKVMELCRDGRRIDV 336 (1354)
T ss_dssp ECCCHHHHHHHHHHCCCC---------SSSSSCCSCTTCEEEEEECBCTTTS-SCBCHHHHHHHHHHHHHHHHTTCCCCE
T ss_pred CCCCCcHHHHHHHHhcCC---------CCCCceeecCCCEEEEEEeccCCCC-cccChHHHHHHHHHHHHHHhhcCCceE
Confidence 478999999999999985 2344589999999999999876521 12355678888888877 79999
Q ss_pred EEEccCCCCCCCCCCHHHHHHHHHH-hcCcEEEEecCCCCCCCCcc--cC--CCCcEEEEccccCCccceeeEEecCCeE
Q 048642 297 ISVSLGGDPADYFNDGTAIGAFHAV-KHGIVVVCSAANSGPELGTV--TN--VSPWIITVGASTLDREFQNFVELRNGQR 371 (782)
Q Consensus 297 In~SlG~~~~~~~~~~~~~a~~~a~-~~Gi~vV~AAGN~g~~~~~~--~~--~~p~vitVgas~~~~~~~~~~~~~~~~~ 371 (782)
||||||........+.+..++.++. ++|++||+||||+|+...++ +. .++++|+|||++...........
T Consensus 337 INmS~G~~~~~~~~~~l~~aI~~A~~~~GVlVVaAAGN~G~~~~ti~~PA~~ss~~VItVGAtd~~~~~~a~ys~----- 411 (1354)
T 3lxu_X 337 INMSYGEHANWSNSGRIGELMNEVVNKYGVVWVASAGNHGPALCTVGTPPDISQPSLIGVGAYVSPQMMEAEYAM----- 411 (1354)
T ss_dssp EEECCCCCCSCSSCCHHHHHHHHHHHTSCCEEEEECCSCCSSSSCCCTTTCSSSSCEEEEEEECCTTCCCC---------
T ss_pred EEcCCccCCCCCccHHHHHHHHHHHHhCCcEEEEeCCCCCCCCCccCCcccccCCceEEEEeecCCCCccccccc-----
Confidence 9999999854344567777888876 89999999999999765444 33 26999999997654311000000
Q ss_pred EeeeeccCCCCCCcccceEecccccccCCCcccccccCCCCCCCCCccceEEEEeeCCcchhhhhHHHHHcCceEEEEec
Q 048642 372 FKGTSLSKSLPNDTFYPLITGLQAKAANADDTAASLCKNGALDHEKVKGKILVCLRGDTARVDKGRQAAVAGAVGMILCN 451 (782)
Q Consensus 372 ~~g~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~n 451 (782)
T Consensus 412 -------------------------------------------------------------------------------- 411 (1354)
T 3lxu_X 412 -------------------------------------------------------------------------------- 411 (1354)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCCCccccCCCcccEEEEehhhHHHHHHHHhcCCCceEEEecCeeeccCCCCCccccccCCCCCCCCCCCcCCeEEeC
Q 048642 452 DKSSGNEITADPHFLPASQITYKDGVKVLDYIKSSDNPMGYITSPSTYLNAKPSPFMASFSSAGPNKITPEILKPDITAP 531 (782)
Q Consensus 452 ~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~AP 531 (782)
.....+.++.|||+||+. ++++||||+||
T Consensus 412 -------------------------------------------------~~~~~g~~asFSS~GPt~--dg~~KpDIaAP 440 (1354)
T 3lxu_X 412 -------------------------------------------------REKLPGNVYTWTSRDPCI--DGGQGVTVCAP 440 (1354)
T ss_dssp -------------------------------------------------------CCCCCCCCSCCS--SSSCCEEEEEE
T ss_pred -------------------------------------------------ccCCCCccccccCCCCCc--cCCCcceEEec
Confidence 000125789999999997 89999999999
Q ss_pred CceEEEeecCCCCCCCCCCCCCCcceeeeccccchhhHHHHHHHHHHh----hCCCCCHHHHHHHHHhccccccCCCCCC
Q 048642 532 GVNIIAAFTGAIGATELPYDTRRIPYNIMSGTSMSCPHVAGVVGLLKT----AHPDWSPSAIRSAIMTTARTRDNTANPM 607 (782)
Q Consensus 532 G~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q----~~p~~sp~~ik~~L~~TA~~~~~~g~~~ 607 (782)
|++|+++..... +.|..++|||||||||||++|||++ .+|.+++.+||++|++||+++..
T Consensus 441 G~~I~St~~~~~-----------~~y~~~SGTSmAAP~VAGvAALLLSalkq~~P~LTp~qVk~lL~~TA~~~~~----- 504 (1354)
T 3lxu_X 441 GGAIASVPQFTM-----------SKSQLMNGTSMAAPHVAGAVALLISGLKQQNIEYSPYSIKRAISVTATKLGY----- 504 (1354)
T ss_dssp C--------------------------CCCCGGGCHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHTTSBCCTT-----
T ss_pred CceEEEeecCCC-----------CceecCCCCCHHHHHHHHHHHHHHHhhHhhCCCCCHHHHHHHHHHhCccCCC-----
Confidence 999999865421 2789999999999999999999986 79999999999999999998743
Q ss_pred CCCCCCCCCCCcccccccCccccCCCCccccCCcchhhhhcccCCCCcc-ceeeeccceecccCCCCCCCCCCCcEEeec
Q 048642 608 RDGSFKKATPFSYGSGHIRPNRAMDPGLVYDLSEDDYLDFLCSIGYNQT-TIKRFFGTQYECSKSANLEDFNYPSISVPM 686 (782)
Q Consensus 608 ~~~~~~~~~~~~~G~G~vd~~~A~~~~lv~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~n~ps~~~~~ 686 (782)
.+++.||+|+||+.+|++..+.++..+.+++.|.|..+.+.. .|.+-. + ...-|+
T Consensus 505 -------~~~~~~G~GlLDa~~AV~~a~~~~~~p~~~v~f~~~v~~~~~rgIylR~------~------~~~~~~----- 560 (1354)
T 3lxu_X 505 -------VDPFAQGHGLLNVEKAFEHLTEHRQSKDNMLRFSVRVGNNADKGIHLRQ------G------VQRNSI----- 560 (1354)
T ss_dssp -------SCTTTSSSSBCCHHHHHHHHHTTTTCGGGGEEEEEEETTTTBSSEEECS------S------CCCSCE-----
T ss_pred -------CCcccccCCEeCHHHHHHHHHhcCCCCccceEEEEEecCCCCCceEEec------c------ccCCce-----
Confidence 235689999999999999999999999999999999885422 221111 0 000000
Q ss_pred cCceEEEEEEEEecC---C--CCeE--EEEEeCCCCceEEEEecEEEEccCCcEEEEEEEEEecCCCCCCceEEEEEEEE
Q 048642 687 ISGSVTLSRKLKNVG---S--PSNY--AASVREPLGISVSVEPKILAFKKIGEEKSFKVTLKPKWSGAPDNYRFGELTWT 759 (782)
Q Consensus 687 ~~~~~t~~~tv~n~~---~--~~ty--~~~~~~~~g~~v~v~p~~~~~~~~~~~~~~~vt~~~~~~~~~~~~~~G~i~~~ 759 (782)
....+++-++.|.. . ...| .+.+.... -.|.+ |..+.+ .++.++|.|.+++.. ...+.++++|...
T Consensus 561 -~~tv~V~p~f~~~~~~~~~~~i~f~~~l~L~~t~-~wv~~-p~~l~l--~~~~r~~~v~vDp~~--L~~G~h~~~v~~~ 633 (1354)
T 3lxu_X 561 -DYNVYIEPIFYNDKEADPKDKFNFNVRLNLIASQ-PWVQC-GAFLDL--SYGTRSIAVRVDPTG--LQPGVHSAVIRAY 633 (1354)
T ss_dssp -EEEEEEEEEESSCSCSSSTTCSCCCCEEEEEESS-TTEEE-CSCEEC--TTSCEEEEEEECGGG--CCSEEEEEEEEEE
T ss_pred -EEEEEEeeeecCcccCChhhccceEEEEEEecCC-Cceec-ccceee--cCCCceEEEEECCCC--CCCcceeEEEEEE
Confidence 01223333342211 1 2222 23333221 23443 888877 467789999999876 4567789999986
Q ss_pred c-----CCcEEEEEEEEEEcc
Q 048642 760 D-----GKHYVRSPIVVNQAQ 775 (782)
Q Consensus 760 ~-----~~~~v~~P~~~~~~~ 775 (782)
| -++..|||+.+..+-
T Consensus 634 D~~~~~~gp~f~ipvTv~~P~ 654 (1354)
T 3lxu_X 634 DTDCVQKGSLFEIPVTVVQPH 654 (1354)
T ss_dssp ESSCTTSCCSEEEEEEEEECB
T ss_pred EcCCcccCceEEeeEEEEeee
Confidence 5 268999999998765
No 23
>3lpc_A APRB2; protease, subtilase, virulence factor, hydrolase; 1.70A {Dichelobacter nodosus} PDB: 3lpa_A 3lpd_A 3ti9_A 3ti7_A
Probab=100.00 E-value=5.7e-49 Score=428.32 Aligned_cols=298 Identities=23% Similarity=0.332 Sum_probs=220.3
Q ss_pred CCCccccCCCCCceEEEEecCCcCcCCCCccCCCCCCCCCCccccccCCCC-Ccccccccc---cccccchhhHhhhccc
Q 048642 135 SSSAWGKGRFGEDIIIANLDTGVWPESKSFSDEGYGPVPSRWKGTCQNSTK-EGVRCNRKL---IGARYFNRAYAAYVKQ 210 (782)
Q Consensus 135 ~~~~w~~~~~G~gV~VaVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~-~~~~~~~ki---~g~~~~~~~~~~~~~~ 210 (782)
+..+|+.+++|+||+||||||||+ +||+|.++- +.+....... .....+.+. .....+.+.+.....+
T Consensus 21 ~~~aw~~g~~G~gV~VaViDtGi~-~hp~l~~~~-------~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 92 (340)
T 3lpc_A 21 ADKVWDMGFTGQNVVVAVVDTGIL-HHRDLNANV-------LPGYDFISNSQISLDGDGRDADPFDEGDWFDNWACGGRP 92 (340)
T ss_dssp HHHHHHHTCSCTTCEEEEEESCBC-CCTTTGGGB-------CCCEECCCCHHHHCSSSSSBSCCBCCCCCBCTTTTSCTT
T ss_pred HHHHHHhcCCCCCeEEEEEcCCCC-CChhhhccc-------ccCccccCCccccccCCCccCCccccccccccccccCCC
Confidence 678999999999999999999998 999997541 1111100000 000000000 0000000000000000
Q ss_pred ccccccCCCCCCCCCCccchhhhhhhccCCCCccccccCCCcceecCccccccccccccCCCCCCCCChhHHHHHHHHhh
Q 048642 211 HNISVNFNNTARDHEGHGTHTLSTAGGNLVPGVNVFGMGNGTAKGGSPKARVAAYKVCWPQVSDGQCFDADILKGFDMAI 290 (782)
Q Consensus 211 ~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~l~~~kv~~~~~~~g~~~~~~i~~ai~~a~ 290 (782)
+ +.....|..||||||||||+|...+ ...+.||||+|+|+.+|++... ++..++++++|+|++
T Consensus 93 -~----~~~~~~d~~gHGT~vAgiia~~~~~--------~~g~~GvAp~a~l~~~~v~~~~----~~~~~~~~~ai~~a~ 155 (340)
T 3lpc_A 93 -D----PRKERSDSSWHGSHVAGTIAAVTNN--------RIGVAGVAYGAKVVPVRALGRC----GGYDSDISDGLYWAA 155 (340)
T ss_dssp -C----GGGSCBCCCCHHHHHHHHHHCCCSS--------SSSCCCTTTTSEEEEEECCBTT----BCCHHHHHHHHHHHH
T ss_pred -C----cccCCCCCCCCHHHHHHHHHccCCC--------CCcceeecCCCEEEEEEEecCC----CCcHHHHHHHHHHHh
Confidence 0 1234578899999999999998532 2235899999999999999876 378889999999999
Q ss_pred h----------CCCeEEEEccCCCCCCCCCCHHHHHHHHHHhcCcEEEEecCCCCCCCC-cccCCCCcEEEEccccCCcc
Q 048642 291 H----------DGVDVISVSLGGDPADYFNDGTAIGAFHAVKHGIVVVCSAANSGPELG-TVTNVSPWIITVGASTLDRE 359 (782)
Q Consensus 291 ~----------~g~dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~-~~~~~~p~vitVgas~~~~~ 359 (782)
+ .+++|||||||... .....+..++.++.++|++||+||||+|.... .++...+++|+|||++.
T Consensus 156 ~~~~~~~~~~~~~~~Vin~S~G~~~--~~~~~~~~~~~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~--- 230 (340)
T 3lpc_A 156 GGRIAGIPENRNPAKVINMSLGSDG--QCSYNAQTMIDRATRLGALVVVAAGNENQNASNTWPTSCNNVLSVGATTS--- 230 (340)
T ss_dssp TCCCTTSCCCSSCCSEEEECCCEES--CCCHHHHHHHHHHHHHTCEEEEECCSSSSBGGGEETTTSSSCEEEEEECT---
T ss_pred cccccccccccCCCeEEEeCcCCCC--CcchhHHHHHHHHHhCCcEEEEeCCCCCCCCCCcCCccCCceEEEecCCC---
Confidence 8 89999999999862 23455777788899999999999999996643 34556789999998542
Q ss_pred ceeeEEecCCeEEeeeeccCCCCCCcccceEecccccccCCCcccccccCCCCCCCCCccceEEEEeeCCcchhhhhHHH
Q 048642 360 FQNFVELRNGQRFKGTSLSKSLPNDTFYPLITGLQAKAANADDTAASLCKNGALDHEKVKGKILVCLRGDTARVDKGRQA 439 (782)
Q Consensus 360 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~ 439 (782)
T Consensus 231 -------------------------------------------------------------------------------- 230 (340)
T 3lpc_A 231 -------------------------------------------------------------------------------- 230 (340)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHcCceEEEEeccCCCCCccccCCCcccEEEEehhhHHHHHHHHhcCCCceEEEecCeeeccCCCCCccccccCCCCCCC
Q 048642 440 AVAGAVGMILCNDKSSGNEITADPHFLPASQITYKDGVKVLDYIKSSDNPMGYITSPSTYLNAKPSPFMASFSSAGPNKI 519 (782)
Q Consensus 440 ~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~ 519 (782)
.+.++.||++||.
T Consensus 231 -----------------------------------------------------------------~~~~~~~S~~g~~-- 243 (340)
T 3lpc_A 231 -----------------------------------------------------------------RGIRASFSNYGVD-- 243 (340)
T ss_dssp -----------------------------------------------------------------TSSBCTTCCBSTT--
T ss_pred -----------------------------------------------------------------CCCcCCCCCCCCC--
Confidence 2467899999984
Q ss_pred CCCCcCCeEEeCCceEEEeecCCCCCCCCCCCCCCcceeeeccccchhhHHHHHHHHHHhh-C---CCCCHHHHHHHHHh
Q 048642 520 TPEILKPDITAPGVNIIAAFTGAIGATELPYDTRRIPYNIMSGTSMSCPHVAGVVGLLKTA-H---PDWSPSAIRSAIMT 595 (782)
Q Consensus 520 ~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~-~---p~~sp~~ik~~L~~ 595 (782)
|||+|||++|+++++..... .....|..++|||||||||||++|||+|+ + |.+++++||++|++
T Consensus 244 ------~di~ApG~~i~s~~~~~~~~------~~~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~p~lt~~~v~~~L~~ 311 (340)
T 3lpc_A 244 ------VDLAAPGQDILSTVDSGTRR------PVSDAYSFMAGTSMATPHVSGVAALVISAANSVNKNLTPAELKDVLVS 311 (340)
T ss_dssp ------CCEEEECSSEEEEEESCSSS------CCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHH
T ss_pred ------ceEEecCCCeecccCCCCcC------CCCCcceecccHhHHHHHHHHHHHHHHHhhhhhCCCCCHHHHHHHHHh
Confidence 59999999999999875321 12236999999999999999999999998 5 99999999999999
Q ss_pred ccccccCCCCCCCCCCCCCCCCCcccccccCccccCCC
Q 048642 596 TARTRDNTANPMRDGSFKKATPFSYGSGHIRPNRAMDP 633 (782)
Q Consensus 596 TA~~~~~~g~~~~~~~~~~~~~~~~G~G~vd~~~A~~~ 633 (782)
||+++.. .++..||+|+||+.+||+.
T Consensus 312 tA~~~~~------------~~~~~~G~G~vd~~~Av~~ 337 (340)
T 3lpc_A 312 TTSPFNG------------RLDRALGSGIVDAEAAVNS 337 (340)
T ss_dssp TCBCCSS------------CCSSCCCSSBCCHHHHHHH
T ss_pred cCCcCCC------------CCCCCcccceecHHHHHHH
Confidence 9998742 2356899999999999974
No 24
>1sh7_A Extracellular subtilisin-like serine proteinase; cold adaptation, psychrotrophic, subtilisin-like proteinase, depentent, hydrolase; HET: PMS; 1.84A {Vibrio SP} PDB: 1s2n_A*
Probab=100.00 E-value=3e-48 Score=410.00 Aligned_cols=237 Identities=27% Similarity=0.382 Sum_probs=201.9
Q ss_pred CCCccccCCCCCceEEEEecCCcCcCCCCccCCCCCCCCCCccccccCCCCCcccccccccccccchhhHhhhccccccc
Q 048642 135 SSSAWGKGRFGEDIIIANLDTGVWPESKSFSDEGYGPVPSRWKGTCQNSTKEGVRCNRKLIGARYFNRAYAAYVKQHNIS 214 (782)
Q Consensus 135 ~~~~w~~~~~G~gV~VaVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~~~ki~g~~~~~~~~~~~~~~~~~~ 214 (782)
...+|..+.+|+||+|||||||||++||+|.++ +...++|.+
T Consensus 18 ~~~aw~~~~~G~gv~VaViDtGvd~~h~~l~~~--------------------------~~~~~~~~~------------ 59 (284)
T 1sh7_A 18 LDRNYNANFDGFGVTAYVIDTGVNNNHEEFGGR--------------------------SVSGYDFVD------------ 59 (284)
T ss_dssp CCSBCCCSCCCTTCEEEEEESCCCTTCTTTTTC--------------------------EEEEEETTT------------
T ss_pred chhhhhcCCCCCCCEEEEEcCCCCCCChhHcCC--------------------------ccccccccC------------
Confidence 467899999999999999999999999999753 222333432
Q ss_pred ccCCCCCCCCCCccchhhhhhhccCCCCccccccCCCcceecCccccccccccccCCCCCCCCChhHHHHHHHHhhhC--
Q 048642 215 VNFNNTARDHEGHGTHTLSTAGGNLVPGVNVFGMGNGTAKGGSPKARVAAYKVCWPQVSDGQCFDADILKGFDMAIHD-- 292 (782)
Q Consensus 215 ~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~l~~~kv~~~~~~~g~~~~~~i~~ai~~a~~~-- 292 (782)
....+.|..||||||||||+|.. .||||+|+|+.+|+++.. |.+..+++++||+|++++
T Consensus 60 --~~~~~~d~~gHGT~vAgiia~~~--------------~GvAp~a~l~~~kv~~~~---g~~~~~~~~~ai~~a~~~~~ 120 (284)
T 1sh7_A 60 --NDADSSDCNGHGTHVAGTIGGSQ--------------YGVAKNVNIVGVRVLSCS---GSGTTSGVISGVDWVAQNAS 120 (284)
T ss_dssp --TBSCCCCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECBCTT---SCBCHHHHHHHHHHHHHHCC
T ss_pred --CCCCCCCCCCcHHHHHHHHhccc--------------CCcCCCCEEEEEEeeCCC---CCcCHHHHHHHHHHHHhCCC
Confidence 12346788999999999999873 699999999999999876 467889999999999974
Q ss_pred CCeEEEEccCCCCCCCCCCHHHHHHHHHHhcCcEEEEecCCCCCCCC-cccCCCCcEEEEccccCCccceeeEEecCCeE
Q 048642 293 GVDVISVSLGGDPADYFNDGTAIGAFHAVKHGIVVVCSAANSGPELG-TVTNVSPWIITVGASTLDREFQNFVELRNGQR 371 (782)
Q Consensus 293 g~dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~-~~~~~~p~vitVgas~~~~~~~~~~~~~~~~~ 371 (782)
+++|||||||.. ....+..++.++.++|++||+||||+|.... ..+...+++|+|||++.
T Consensus 121 ~~~Vin~S~G~~----~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~--------------- 181 (284)
T 1sh7_A 121 GPSVANMSLGGG----QSTALDSAVQGAIQSGVSFMLAAGNSNADACNTSPARVPSGVTVGSTTS--------------- 181 (284)
T ss_dssp SSEEEEECCCBS----CCHHHHHHHHHHHHTTCEEEEECCSSSSBGGGSBTTTCTTSEEEEEECT---------------
T ss_pred CCcEEEeCCCCC----CCHHHHHHHHHHHHCCCEEEEECCcCCCCCCccccccCCCeEEEEEecC---------------
Confidence 799999999987 3456778888899999999999999996543 34556799999998542
Q ss_pred EeeeeccCCCCCCcccceEecccccccCCCcccccccCCCCCCCCCccceEEEEeeCCcchhhhhHHHHHcCceEEEEec
Q 048642 372 FKGTSLSKSLPNDTFYPLITGLQAKAANADDTAASLCKNGALDHEKVKGKILVCLRGDTARVDKGRQAAVAGAVGMILCN 451 (782)
Q Consensus 372 ~~g~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~n 451 (782)
T Consensus 182 -------------------------------------------------------------------------------- 181 (284)
T 1sh7_A 182 -------------------------------------------------------------------------------- 181 (284)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCCCccccCCCcccEEEEehhhHHHHHHHHhcCCCceEEEecCeeeccCCCCCccccccCCCCCCCCCCCcCCeEEeC
Q 048642 452 DKSSGNEITADPHFLPASQITYKDGVKVLDYIKSSDNPMGYITSPSTYLNAKPSPFMASFSSAGPNKITPEILKPDITAP 531 (782)
Q Consensus 452 ~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~AP 531 (782)
.+.++.||++||.. ||+||
T Consensus 182 -----------------------------------------------------~~~~~~~S~~G~~~--------di~Ap 200 (284)
T 1sh7_A 182 -----------------------------------------------------SDSRSSFSNWGSCV--------DLFAP 200 (284)
T ss_dssp -----------------------------------------------------TSBBCTTCCBSTTC--------CEEEE
T ss_pred -----------------------------------------------------CCCcCcccCCCCcc--------EEEec
Confidence 14678999999976 99999
Q ss_pred CceEEEeecCCCCCCCCCCCCCCcceeeeccccchhhHHHHHHHHHHhhCCCCCHHHHHHHHHhcccccc
Q 048642 532 GVNIIAAFTGAIGATELPYDTRRIPYNIMSGTSMSCPHVAGVVGLLKTAHPDWSPSAIRSAIMTTARTRD 601 (782)
Q Consensus 532 G~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~sp~~ik~~L~~TA~~~~ 601 (782)
|++|+++++.+ .|..++|||||||||||++|||+|++|+++++|||++|++||++..
T Consensus 201 G~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~ 257 (284)
T 1sh7_A 201 GSQIKSAWYDG-------------GYKTISGTSMATPHVAGVAALYLQENNGLTPLQLTGLLNSRASENK 257 (284)
T ss_dssp CSSEEEECTTS-------------SEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEESC
T ss_pred cCCeEEecCCC-------------CEEEccChHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCC
Confidence 99999998764 8999999999999999999999999999999999999999998764
No 25
>1wmd_A Protease; alpha-beta hydrolase fold, jelly-roll beta-barrel, hydrolase; 1.30A {Bacillus SP} SCOP: b.18.1.20 c.41.1.1 PDB: 1wme_A 1wmf_A
Probab=100.00 E-value=9e-49 Score=440.12 Aligned_cols=295 Identities=26% Similarity=0.346 Sum_probs=224.5
Q ss_pred CCCccc-cCCCCCceEEEEecCCcCc------CCCCccCCCCCCCCCCccccccCCCCCcccccccccccccchhhHhhh
Q 048642 135 SSSAWG-KGRFGEDIIIANLDTGVWP------ESKSFSDEGYGPVPSRWKGTCQNSTKEGVRCNRKLIGARYFNRAYAAY 207 (782)
Q Consensus 135 ~~~~w~-~~~~G~gV~VaVIDtGid~------~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~~~ki~g~~~~~~~~~~~ 207 (782)
+..+|. .+.+|+||+|||||||||+ .||+|.++ +...++|.+
T Consensus 10 ~~~~~~~~g~~G~gv~VaViDtGvd~~~~~~~~hp~l~~~--------------------------i~~~~~~~~----- 58 (434)
T 1wmd_A 10 ADVAQSSYGLYGQGQIVAVADTGLDTGRNDSSMHEAFRGK--------------------------ITALYALGR----- 58 (434)
T ss_dssp HHHHHHHHCCSCTTCEEEEEESCCTTSCSSTTSCTTTTTC--------------------------EEEEEETTT-----
T ss_pred chhhhhccCCCCcccEEEEEecCcCCCCCCcccCcccCCC--------------------------EeeeccccC-----
Confidence 347897 7999999999999999999 79999753 333333321
Q ss_pred cccccccccCCCCCCCCCCccchhhhhhhccCCCCccccccCCCcceecCccccccccccccCCCCCCCCChhHHHHHHH
Q 048642 208 VKQHNISVNFNNTARDHEGHGTHTLSTAGGNLVPGVNVFGMGNGTAKGGSPKARVAAYKVCWPQVSDGQCFDADILKGFD 287 (782)
Q Consensus 208 ~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~l~~~kv~~~~~~~g~~~~~~i~~ai~ 287 (782)
...+.|..||||||||||+|+. ..+.||||+|+|+.+|+++..+.. .+..+++.++|+
T Consensus 59 ----------~~~~~d~~gHGT~VAgiiag~g-----------~~~~GvAp~a~l~~~~v~~~~g~~-~~~~~~~~~ai~ 116 (434)
T 1wmd_A 59 ----------TNNANDTNGHGTHVAGSVLGNG-----------STNKGMAPQANLVFQSIMDSGGGL-GGLPSNLQTLFS 116 (434)
T ss_dssp ----------TTCCCCSSSHHHHHHHHHHCCS-----------SSSCCSSTTSEEEEEECCCTTSSC-TTSCSSHHHHHH
T ss_pred ----------CCCCCCCCCcHHHHHHHHHcCC-----------CCceeeCCCCEEEEEEeecCCCcc-ccccHHHHHHHH
Confidence 2256688999999999999863 125899999999999999765211 124678999999
Q ss_pred HhhhCCCeEEEEccCCCCCCCCCCHHHHHHHHH-HhcCcEEEEecCCCCCCCCc--ccCCCCcEEEEccccCCccceeeE
Q 048642 288 MAIHDGVDVISVSLGGDPADYFNDGTAIGAFHA-VKHGIVVVCSAANSGPELGT--VTNVSPWIITVGASTLDREFQNFV 364 (782)
Q Consensus 288 ~a~~~g~dVIn~SlG~~~~~~~~~~~~~a~~~a-~~~Gi~vV~AAGN~g~~~~~--~~~~~p~vitVgas~~~~~~~~~~ 364 (782)
+++++|++|||||||...... .+....++.++ .++|++||+||||+|....+ .+..++++|+|||++..+...
T Consensus 117 ~a~~~g~~Vin~S~G~~~~~~-~~~~~~~id~~~~~~gvlvV~AAGN~g~~~~~~~~Pa~~~~vitVga~~~~~~~~--- 192 (434)
T 1wmd_A 117 QAYSAGARIHTNSWGAAVNGA-YTTDSRNVDDYVRKNDMTILFAAGNEGPNGGTISAPGTAKNAITVGATENLRPSF--- 192 (434)
T ss_dssp HHHHTTCSEEEECCCBCCTTC-CCHHHHHHHHHHHHSSCEEEEECCSCTTSSSCCCBSTTCSSSEEEEEECCSCGGG---
T ss_pred HHHhcCCeEEEecCCCCcCCc-CCHHHHHHHHHHhCCCeEEEEECCCCCCCCcccCCcccCCccEEEecccccCccc---
Confidence 999999999999999874212 23455566555 58999999999999976443 344679999999976432100
Q ss_pred EecCCeEEeeeeccCCCCCCcccceEecccccccCCCcccccccCCCCCCCCCccceEEEEeeCCcchhhhhHHHHHcCc
Q 048642 365 ELRNGQRFKGTSLSKSLPNDTFYPLITGLQAKAANADDTAASLCKNGALDHEKVKGKILVCLRGDTARVDKGRQAAVAGA 444 (782)
Q Consensus 365 ~~~~~~~~~g~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga 444 (782)
|.
T Consensus 193 ------------------------------------------------------------------------------~~ 194 (434)
T 1wmd_A 193 ------------------------------------------------------------------------------GS 194 (434)
T ss_dssp ------------------------------------------------------------------------------CG
T ss_pred ------------------------------------------------------------------------------Cc
Confidence 00
Q ss_pred eEEEEeccCCCCCccccCCCcccEEEEehhhHHHHHHHHhcCCCceEEEecCeeeccCCCCCccccccCCCCCCCCCCCc
Q 048642 445 VGMILCNDKSSGNEITADPHFLPASQITYKDGVKVLDYIKSSDNPMGYITSPSTYLNAKPSPFMASFSSAGPNKITPEIL 524 (782)
Q Consensus 445 ~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~ 524 (782)
.....+.++.||++||+. ++++
T Consensus 195 --------------------------------------------------------~~~~~~~~a~fS~~G~~~--~g~~ 216 (434)
T 1wmd_A 195 --------------------------------------------------------YADNINHVAQFSSRGPTK--DGRI 216 (434)
T ss_dssp --------------------------------------------------------GGSCTTSBCTTSCCCCCT--TSCC
T ss_pred --------------------------------------------------------ccCCCCccccccCCCCCC--CCCC
Confidence 001135889999999997 8999
Q ss_pred CCeEEeCCceEEEeecCCCCCCCCCCCCCCcceeeeccccchhhHHHHHHHHHHhhCCCC-----CHHHHHHHHHhcccc
Q 048642 525 KPDITAPGVNIIAAFTGAIGATELPYDTRRIPYNIMSGTSMSCPHVAGVVGLLKTAHPDW-----SPSAIRSAIMTTART 599 (782)
Q Consensus 525 KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~-----sp~~ik~~L~~TA~~ 599 (782)
||||+|||++|+++++........ .......|..++|||||||||||++|||+|++|++ ++++||++|++||++
T Consensus 217 kpdi~ApG~~i~s~~~~~~~~~~~-~~~~~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~s~~~vk~~L~~tA~~ 295 (434)
T 1wmd_A 217 KPDVMAPGTFILSARSSLAPDSSF-WANHDSKYAYMGGTSMATPIVAGNVAQLREHFVKNRGITPKPSLLKAALIAGAAD 295 (434)
T ss_dssp CCCEEEECSSEEEECCTTCCGGGS-SEEEETTEEEECSHHHHHHHHHHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHCBC
T ss_pred CceEEcCCCCeEecCCCCCCCccc-ccCCCCceEeecchhHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHcCCcc
Confidence 999999999999998653210000 00013489999999999999999999999999875 899999999999987
Q ss_pred ccCCCCCCCCCCCCCCCCCcccccccCccccCCCC
Q 048642 600 RDNTANPMRDGSFKKATPFSYGSGHIRPNRAMDPG 634 (782)
Q Consensus 600 ~~~~g~~~~~~~~~~~~~~~~G~G~vd~~~A~~~~ 634 (782)
+.. ..+++.||||+||+.+|++..
T Consensus 296 ~~~-----------~~~~~~~G~G~vd~~~a~~~~ 319 (434)
T 1wmd_A 296 IGL-----------GYPNGNQGWGRVTLDKSLNVA 319 (434)
T ss_dssp CSS-----------CSSCTTTTTCBCCHHHHHTCE
T ss_pred cCC-----------CCCCccCCcCeEeHHHhcccc
Confidence 531 235789999999999999754
No 26
>2b6n_A Proteinase K; S binding, substrate specificity, proteinase K, subtilase, psychrotrophic, psychrophilic, hydrolase; 1.80A {Serratia SP}
Probab=100.00 E-value=1.1e-47 Score=405.20 Aligned_cols=238 Identities=29% Similarity=0.390 Sum_probs=200.9
Q ss_pred CCCccccCCCCCceEEEEecCCcCcCCCCccCCCCCCCCCCccccccCCCCCcccccccccccccchhhHhhhccccccc
Q 048642 135 SSSAWGKGRFGEDIIIANLDTGVWPESKSFSDEGYGPVPSRWKGTCQNSTKEGVRCNRKLIGARYFNRAYAAYVKQHNIS 214 (782)
Q Consensus 135 ~~~~w~~~~~G~gV~VaVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~~~ki~g~~~~~~~~~~~~~~~~~~ 214 (782)
...+|..+.+|+||+|||||||||++||+|.++ +...++|.+
T Consensus 20 ~~~~~~~~~~G~gv~VaViDtGid~~Hpdl~~~--------------------------~~~~~d~~~------------ 61 (278)
T 2b6n_A 20 LDNNYHTDYDGSGVTAFVIDTGVLNTHNEFGGR--------------------------ASSGYDFID------------ 61 (278)
T ss_dssp CCSEEECSCCCTTCEEEEEESCCCTTCGGGTTC--------------------------EEEEEETTT------------
T ss_pred cchhcccCCCCCCCEEEEEeCCCCCCChhHhcc--------------------------cccCeecCC------------
Confidence 457899999999999999999999999999753 222333332
Q ss_pred ccCCCCCCCCCCccchhhhhhhccCCCCccccccCCCcceecCccccccccccccCCCCCCCCChhHHHHHHHHhhh--C
Q 048642 215 VNFNNTARDHEGHGTHTLSTAGGNLVPGVNVFGMGNGTAKGGSPKARVAAYKVCWPQVSDGQCFDADILKGFDMAIH--D 292 (782)
Q Consensus 215 ~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~l~~~kv~~~~~~~g~~~~~~i~~ai~~a~~--~ 292 (782)
+..++.|..||||||||||+|.. .||||+|+|+.+|++++. +.+..+++++||+|+++ .
T Consensus 62 --~~~~~~d~~gHGT~vAgiia~~~--------------~GvAp~a~i~~~~v~~~~---g~~~~~~~~~ai~~a~~~~~ 122 (278)
T 2b6n_A 62 --NDYDATDCNGHGTHVAGTIGGST--------------YGVAKNVNVVGVRVLNCS---GSGSNSGVIAGINWVKNNAS 122 (278)
T ss_dssp --TBSCCCCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTT---SCCCHHHHHHHHHHHHHHCC
T ss_pred --CCCCCCCCCCcHHHHHHHHHCCC--------------cCCCCCCeEEEEEEECCC---CCccHHHHHHHHHHHHhCCC
Confidence 12345788999999999999873 699999999999999876 46788999999999997 5
Q ss_pred CCeEEEEccCCCCCCCCCCHHHHHHHHHHhcCcEEEEecCCCCCCCCc-ccCCCCcEEEEccccCCccceeeEEecCCeE
Q 048642 293 GVDVISVSLGGDPADYFNDGTAIGAFHAVKHGIVVVCSAANSGPELGT-VTNVSPWIITVGASTLDREFQNFVELRNGQR 371 (782)
Q Consensus 293 g~dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~-~~~~~p~vitVgas~~~~~~~~~~~~~~~~~ 371 (782)
+++|||||||... ...+..++.++.++|++||+||||+|..... .+...+++|+|||++.
T Consensus 123 g~~Vin~S~G~~~----~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~--------------- 183 (278)
T 2b6n_A 123 GPAVANMSLGGGA----SQATDDAVNAAVAAGITFVVAAGNDNSNACNYSPARAADAITVGSTTS--------------- 183 (278)
T ss_dssp SSEEEEECCCEEC----CHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECT---------------
T ss_pred CCeEEEECCCCCc----CHHHHHHHHHHHHCCCEEEEEeCCCCCCCCCcCcccCCCeEEEEeeCC---------------
Confidence 9999999999873 4567778888999999999999999975433 3556789999998542
Q ss_pred EeeeeccCCCCCCcccceEecccccccCCCcccccccCCCCCCCCCccceEEEEeeCCcchhhhhHHHHHcCceEEEEec
Q 048642 372 FKGTSLSKSLPNDTFYPLITGLQAKAANADDTAASLCKNGALDHEKVKGKILVCLRGDTARVDKGRQAAVAGAVGMILCN 451 (782)
Q Consensus 372 ~~g~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~n 451 (782)
T Consensus 184 -------------------------------------------------------------------------------- 183 (278)
T 2b6n_A 184 -------------------------------------------------------------------------------- 183 (278)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCCCccccCCCcccEEEEehhhHHHHHHHHhcCCCceEEEecCeeeccCCCCCccccccCCCCCCCCCCCcCCeEEeC
Q 048642 452 DKSSGNEITADPHFLPASQITYKDGVKVLDYIKSSDNPMGYITSPSTYLNAKPSPFMASFSSAGPNKITPEILKPDITAP 531 (782)
Q Consensus 452 ~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~AP 531 (782)
.+.++.||++||.. ||+||
T Consensus 184 -----------------------------------------------------~~~~~~~S~~G~~~--------di~Ap 202 (278)
T 2b6n_A 184 -----------------------------------------------------NDSRSSFSNYGTCL--------DIYAP 202 (278)
T ss_dssp -----------------------------------------------------TSBBCTTCCBSTTC--------CEEEE
T ss_pred -----------------------------------------------------CCCcCCcCCCCCCC--------eEEeC
Confidence 14678999999865 99999
Q ss_pred CceEEEeecCCCCCCCCCCCCCCcceeeeccccchhhHHHHHHHHHHhhCCCCCHHHHHHHHHhccccc
Q 048642 532 GVNIIAAFTGAIGATELPYDTRRIPYNIMSGTSMSCPHVAGVVGLLKTAHPDWSPSAIRSAIMTTARTR 600 (782)
Q Consensus 532 G~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~sp~~ik~~L~~TA~~~ 600 (782)
|++|+++++... ..|..++|||||||||||++|||+|++|++++.+||++|++||++.
T Consensus 203 G~~i~s~~~~~~-----------~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~ 260 (278)
T 2b6n_A 203 GSSITSSWYTSN-----------SATNTISGTSMASPHVAGVAALYLDENPNLSPAQVTNLLKTRATAD 260 (278)
T ss_dssp CSSEEEECTTST-----------TCEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEES
T ss_pred CCCeECcccCCC-----------CCEEEeCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccC
Confidence 999999987531 2899999999999999999999999999999999999999999875
No 27
>4dzt_A Aqualysin-1, aqualysin-I; serine protease, calcium binding, inhibitor, hydrolase-hydro inhibitor complex; HET: PMS; 1.95A {Thermus aquaticus}
Probab=100.00 E-value=1.3e-47 Score=404.80 Aligned_cols=240 Identities=27% Similarity=0.352 Sum_probs=203.9
Q ss_pred cCCCccccCCCCCceEEEEecCCcCcCCCCccCCCCCCCCCCccccccCCCCCcccccccccccccchhhHhhhcccccc
Q 048642 134 HSSSAWGKGRFGEDIIIANLDTGVWPESKSFSDEGYGPVPSRWKGTCQNSTKEGVRCNRKLIGARYFNRAYAAYVKQHNI 213 (782)
Q Consensus 134 ~~~~~w~~~~~G~gV~VaVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~~~ki~g~~~~~~~~~~~~~~~~~ 213 (782)
+...+|..+.+|+||+|||||||||++||+|.++ +...++|.
T Consensus 19 ~~~~a~~~~~~G~gv~VaViDtGvd~~h~~l~~~--------------------------~~~~~~~~------------ 60 (276)
T 4dzt_A 19 PLSNSYTYTATGRGVNVYVIDTGIRTTHREFGGR--------------------------ARVGYDAL------------ 60 (276)
T ss_dssp SCCSCEECSCCCTTCEEEEEESCCCTTCGGGTTC--------------------------EEEEEETT------------
T ss_pred CcccceecCCCCCCcEEEEEccCCCCCChhHccC--------------------------eeccccCC------------
Confidence 3567899999999999999999999999999753 22222222
Q ss_pred cccCCCCCCCCCCccchhhhhhhccCCCCccccccCCCcceecCccccccccccccCCCCCCCCChhHHHHHHHHhhhC-
Q 048642 214 SVNFNNTARDHEGHGTHTLSTAGGNLVPGVNVFGMGNGTAKGGSPKARVAAYKVCWPQVSDGQCFDADILKGFDMAIHD- 292 (782)
Q Consensus 214 ~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~l~~~kv~~~~~~~g~~~~~~i~~ai~~a~~~- 292 (782)
.....|..||||||||||+|.. .||||+|+|+.+|+++.. +.+..+.++++|+|+++.
T Consensus 61 ----~~~~~d~~gHGT~vAgiiag~~--------------~GvAp~a~l~~~~v~~~~---~~~~~~~~~~ai~~~~~~~ 119 (276)
T 4dzt_A 61 ----GGNGQDCNGHGTHVAGTIGGVT--------------YGVAKAVNLYAVRVLDCN---GSGSTSGVIAGVDWVTRNH 119 (276)
T ss_dssp ----SSCSCCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTT---SCCCHHHHHHHHHHHHHHC
T ss_pred ----CCCCCCCCCCHHHHHHHHHccc--------------cCCCCCCEEEEEEEeCCC---CCcCHHHHHHHHHHHHhcC
Confidence 1245688999999999999873 699999999999999877 467899999999999987
Q ss_pred -CCeEEEEccCCCCCCCCCCHHHHHHHHHHhcCcEEEEecCCCCCCCCcc-cCCCCcEEEEccccCCccceeeEEecCCe
Q 048642 293 -GVDVISVSLGGDPADYFNDGTAIGAFHAVKHGIVVVCSAANSGPELGTV-TNVSPWIITVGASTLDREFQNFVELRNGQ 370 (782)
Q Consensus 293 -g~dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~-~~~~p~vitVgas~~~~~~~~~~~~~~~~ 370 (782)
+++|||||||... ...+..++.++.++|+++|+||||+|...... +...+++|+|||++.
T Consensus 120 ~~~~vin~S~g~~~----~~~~~~a~~~a~~~gvlvv~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~-------------- 181 (276)
T 4dzt_A 120 RRPAVANMSLGGGV----STALDNAVKNSIAAGVVYAVAAGNDNANACNYSPARVAEALTVGATTS-------------- 181 (276)
T ss_dssp CSSEEEEECCCEEC----CHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECT--------------
T ss_pred CCCeEEEECCCCCC----CHHHHHHHHHHHhCCCEEEEECCCCCCCCCCcCcccCCCEEEEEEECC--------------
Confidence 9999999999862 46678888899999999999999999764443 556789999998542
Q ss_pred EEeeeeccCCCCCCcccceEecccccccCCCcccccccCCCCCCCCCccceEEEEeeCCcchhhhhHHHHHcCceEEEEe
Q 048642 371 RFKGTSLSKSLPNDTFYPLITGLQAKAANADDTAASLCKNGALDHEKVKGKILVCLRGDTARVDKGRQAAVAGAVGMILC 450 (782)
Q Consensus 371 ~~~g~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~ 450 (782)
T Consensus 182 -------------------------------------------------------------------------------- 181 (276)
T 4dzt_A 182 -------------------------------------------------------------------------------- 181 (276)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCCCCccccCCCcccEEEEehhhHHHHHHHHhcCCCceEEEecCeeeccCCCCCccccccCCCCCCCCCCCcCCeEEe
Q 048642 451 NDKSSGNEITADPHFLPASQITYKDGVKVLDYIKSSDNPMGYITSPSTYLNAKPSPFMASFSSAGPNKITPEILKPDITA 530 (782)
Q Consensus 451 n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~A 530 (782)
.+.++.||++||.. ||+|
T Consensus 182 ------------------------------------------------------~~~~~~~S~~g~~~--------dv~A 199 (276)
T 4dzt_A 182 ------------------------------------------------------SDARASFSNYGSCV--------DLFA 199 (276)
T ss_dssp ------------------------------------------------------TSBBCTTCCBSTTC--------CEEE
T ss_pred ------------------------------------------------------CCCcCCcCCCCCCc--------eEEe
Confidence 24778999999986 9999
Q ss_pred CCceEEEeecCCCCCCCCCCCCCCcceeeeccccchhhHHHHHHHHHHhhCCCCCHHHHHHHHHhccccccCC
Q 048642 531 PGVNIIAAFTGAIGATELPYDTRRIPYNIMSGTSMSCPHVAGVVGLLKTAHPDWSPSAIRSAIMTTARTRDNT 603 (782)
Q Consensus 531 PG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~sp~~ik~~L~~TA~~~~~~ 603 (782)
||++|+++++... ..|..++|||||||+|||++|||+|++|++++++||++|++||++....
T Consensus 200 pG~~i~s~~~~~~-----------~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~~~ 261 (276)
T 4dzt_A 200 PGASIPSAWYTSD-----------TATQTLNGTSMATPHVAGVAALYLEQNPSATPASVASAILNGATTGRLS 261 (276)
T ss_dssp ECSSEEEECTTSS-----------SCEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEESCCB
T ss_pred CCCCeEccccCCC-----------CceEEeeEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCcCCccC
Confidence 9999999987642 2789999999999999999999999999999999999999999986433
No 28
>2oxa_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria} PDB: 3hjr_A
Probab=100.00 E-value=3.5e-47 Score=443.33 Aligned_cols=301 Identities=20% Similarity=0.188 Sum_probs=208.1
Q ss_pred cCCCccccCCCCCceEEEEecCCcCcCCCCccCCCCCCCCCCccccccCCCCCcccccccccccccchhhHhhhcccccc
Q 048642 134 HSSSAWGKGRFGEDIIIANLDTGVWPESKSFSDEGYGPVPSRWKGTCQNSTKEGVRCNRKLIGARYFNRAYAAYVKQHNI 213 (782)
Q Consensus 134 ~~~~~w~~~~~G~gV~VaVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~~~ki~g~~~~~~~~~~~~~~~~~ 213 (782)
.+..+|..+.+|+||+|||||||||++||+|.++ .+.+.++|..+.
T Consensus 58 n~~~aw~~g~~G~gV~VaViDtGid~~Hpdl~~~-------------------------~~~~~~~~~~~~--------- 103 (600)
T 2oxa_A 58 NLWWAHRTGVLGHGVNVAVVDDGLAIAHPDLADN-------------------------VRPGSKNVVTGS--------- 103 (600)
T ss_dssp CCHHHHHTTCSCTTCEEEEESSCCCTTCTTTGGG-------------------------BCSCCBCTTTCS---------
T ss_pred ChHHHHhcCCCCCCcEEEEecCCcCCCCcchhhc-------------------------cccCceeccCCC---------
Confidence 4678999999999999999999999999999753 111223343221
Q ss_pred cccCCCCCCC-CCCccchhhhhhhccCCCCccccccCCCcceecCccccccccccccCCCCCCCCC-hhHHHHHHHHhhh
Q 048642 214 SVNFNNTARD-HEGHGTHTLSTAGGNLVPGVNVFGMGNGTAKGGSPKARVAAYKVCWPQVSDGQCF-DADILKGFDMAIH 291 (782)
Q Consensus 214 ~~~~~~~~~d-~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~l~~~kv~~~~~~~g~~~-~~~i~~ai~~a~~ 291 (782)
....|.| ..||||||||||||. .+ +..+.||||+|+|+.+|+++... ... ...+++....+..
T Consensus 104 ---~d~~p~d~~~gHGT~vAGiiaa~-~n--------~~g~~GVAp~A~l~~vkv~~~~~---~~~~~~~~~~~~~~a~~ 168 (600)
T 2oxa_A 104 ---DDPTPTDPDTGHGTSVSGIIAAV-DN--------AIGTKGIAPRAQLQGFNLLDDNS---QQLQKDWLYALGDSNAS 168 (600)
T ss_dssp ---SCCCCCSTTCCHHHHHHHHHHCC-SS--------SSSCCCSSTTCEEEEECTTSTTC---CCCHHHHHHHTTTSHHH
T ss_pred ---CCCCCCCCCCCCccHHHHHhhcc-cC--------CCcceEEccCCceEEEeeecCcc---cchHHHHHHHHhhhhcc
Confidence 1123344 789999999999998 22 23358999999999999998762 221 2334444444677
Q ss_pred CCCeEEEEccCCCC-CCCCCC----HHHHHHHH---HHhcCcEEEEecCCCCCCC----------------------Ccc
Q 048642 292 DGVDVISVSLGGDP-ADYFND----GTAIGAFH---AVKHGIVVVCSAANSGPEL----------------------GTV 341 (782)
Q Consensus 292 ~g~dVIn~SlG~~~-~~~~~~----~~~~a~~~---a~~~Gi~vV~AAGN~g~~~----------------------~~~ 341 (782)
++++|||||||... .....+ .+..++.. +.++|++||+||||+|... ...
T Consensus 169 ~~~~Vin~S~G~~~~~~~~~~~~~~~~~~~~~~~~~a~~~GilvV~AAGN~g~~~~~~~~~~~Pa~~~~~~p~~~~n~~~ 248 (600)
T 2oxa_A 169 RDNRVFNHSYRMSVVDPRSANSLDQSQLDRLFEQQTLKAQGAAYIKAAGNGFNKIAAGGYVLNRTGNGPKLPFENSNLDP 248 (600)
T ss_dssp HTCSEEEECCCCCCSSCCCSCSHHHHHHHHHHHHHHHSTTCCEEEEECCSCSSEEEETTEEEEEESCSSCCCSSBTTSSG
T ss_pred cCCeEEEEeccCCCCCccccCchhHHHHHHHHHHHHhccCCcEEEEecCCCCccCCCCcceecCccccccccccccccCC
Confidence 89999999999873 122222 22222222 4478999999999998631 111
Q ss_pred cCCCCcEEEEccccCCccceeeEEecCCeEEeeeeccCCCCCCcccceEecccccccCCCcccccccCCCCCCCCCccce
Q 048642 342 TNVSPWIITVGASTLDREFQNFVELRNGQRFKGTSLSKSLPNDTFYPLITGLQAKAANADDTAASLCKNGALDHEKVKGK 421 (782)
Q Consensus 342 ~~~~p~vitVgas~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gk 421 (782)
.+.++|+|+|||++.
T Consensus 249 ~~~s~~vItVgA~~~----------------------------------------------------------------- 263 (600)
T 2oxa_A 249 SNSNFWNLVVSALNA----------------------------------------------------------------- 263 (600)
T ss_dssp GGGSSSEEEEEEECT-----------------------------------------------------------------
T ss_pred cccCceeEEEecccC-----------------------------------------------------------------
Confidence 123456777776432
Q ss_pred EEEEeeCCcchhhhhHHHHHcCceEEEEeccCCCCCccccCCCcccEEEEehhhHHHHHHHHhcCCCceEEEecCeeecc
Q 048642 422 ILVCLRGDTARVDKGRQAAVAGAVGMILCNDKSSGNEITADPHFLPASQITYKDGVKVLDYIKSSDNPMGYITSPSTYLN 501 (782)
Q Consensus 422 ivl~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~ 501 (782)
T Consensus 264 -------------------------------------------------------------------------------- 263 (600)
T 2oxa_A 264 -------------------------------------------------------------------------------- 263 (600)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCccccccCCCCCCCCCCCcCCeEEeCCceEEEeec-------CCCCCC--------------CCCCCCCCcceeee
Q 048642 502 AKPSPFMASFSSAGPNKITPEILKPDITAPGVNIIAAFT-------GAIGAT--------------ELPYDTRRIPYNIM 560 (782)
Q Consensus 502 ~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~sa~~-------~~~~~~--------------~~~~~~~~~~y~~~ 560 (782)
.+.++.||++||+. ||+|||++|.+..+ .+.... ....+.....|..+
T Consensus 264 ---~g~~a~fS~~G~~v--------dv~APG~~i~~~~p~i~ttd~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~ 332 (600)
T 2oxa_A 264 ---DGVRSSYSSVGSNI--------FLSATGGEYGTDTPAMVTTDLPGCDMGYNRTDDPSTNRLHGNSQLDASCDYNGVM 332 (600)
T ss_dssp ---TSSBCTTCCBCTTE--------EEEEECCSCSSSSCCEEEECCSSTTSSSSSTTSCCSSTTTTCTTTCTTCCEEEEE
T ss_pred ---CCCcCCcCCCCCCe--------EEEeccCCCCcCCCceEeccccccccccccccccccccccccccccCCccccccc
Confidence 25789999999987 99999998544322 110000 00011122358999
Q ss_pred ccccchhhHHHHHHHHHHhhCCCCCHHHHHHHHHhccccccCCCCCCC--------------------CCCCCCCCCCcc
Q 048642 561 SGTSMSCPHVAGVVGLLKTAHPDWSPSAIRSAIMTTARTRDNTANPMR--------------------DGSFKKATPFSY 620 (782)
Q Consensus 561 sGTSmAaP~VAG~aALl~q~~p~~sp~~ik~~L~~TA~~~~~~g~~~~--------------------~~~~~~~~~~~~ 620 (782)
+|||||||||||++|||+|++|+|+|++||++|++||++++..+.++. ........++.|
T Consensus 333 sGTS~AaP~VAGvaALl~s~~P~lt~~~vk~~L~~tA~~~~~~~~~~~~~~~~~~G~~~~~~~~~~w~~n~~g~~~~~~~ 412 (600)
T 2oxa_A 333 NGTSSATPSTSGAMALLMSAYPDLSVRDLRDLLARSATRVDAKHQPVMVSYTSSTGKVRDVKGLEGWERNAAGMWFSPTY 412 (600)
T ss_dssp CSHHHHHHHHHHHHHHHHHHSTTSCHHHHHHHHHHHCBCCSTTCCCEEEEEECTTSCEEEEEEECCSEECTTSCEEBTTT
T ss_pred ccchHHhHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCCcccccccccccccccccccccccccccccCCCccccccC
Confidence 999999999999999999999999999999999999999865442211 111223346789
Q ss_pred cccccCccccCCCCccccC
Q 048642 621 GSGHIRPNRAMDPGLVYDL 639 (782)
Q Consensus 621 G~G~vd~~~A~~~~lv~~~ 639 (782)
|||+||+.+|++....+..
T Consensus 413 G~G~vda~~Av~~A~~~~~ 431 (600)
T 2oxa_A 413 GFGLIDVNKALELAANHQP 431 (600)
T ss_dssp BTCBCCHHHHHHHHTTCCC
T ss_pred CCchhhHHHHHHHHHhccc
Confidence 9999999999986554443
No 29
>2pwa_A Proteinase K; structure, alanine boronic acid, hydrolase; 0.83A {Engyodontium album} SCOP: c.41.1.1 PDB: 1p7v_A 1p7w_A 2dqk_A 2duj_A 2g4v_A 2hd4_A 2hpz_A 2id8_A 2pq2_A 1ic6_A 2pwb_A* 2pyz_A* 2v8b_A 3aj8_A 3aj9_A 3dyb_A* 3gt3_A* 3gt4_A* 3l1k_A 3osz_A ...
Probab=100.00 E-value=9.3e-48 Score=405.17 Aligned_cols=240 Identities=28% Similarity=0.374 Sum_probs=201.5
Q ss_pred ccccCCCCCceEEEEecCCcCcCCCCccCCCCCCCCCCccccccCCCCCcccccccccccccchhhHhhhcccccccccC
Q 048642 138 AWGKGRFGEDIIIANLDTGVWPESKSFSDEGYGPVPSRWKGTCQNSTKEGVRCNRKLIGARYFNRAYAAYVKQHNISVNF 217 (782)
Q Consensus 138 ~w~~~~~G~gV~VaVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~~~ki~g~~~~~~~~~~~~~~~~~~~~~ 217 (782)
.|.. .+|+||+|+|||||||++||+|.++ +...++|.
T Consensus 24 ~~~~-~~G~gv~VaViDsGvd~~H~~l~~~--------------------------~~~~~~~~---------------- 60 (279)
T 2pwa_A 24 YYDE-SAGQGSCVYVIDTGIEASHPEFEGR--------------------------AQMVKTYY---------------- 60 (279)
T ss_dssp ECCT-TTTTTEEEEEEESCCCTTCGGGTTC--------------------------EEEEEESS----------------
T ss_pred cccC-CCCCCCEEEEEeCCCCCCChhHhCc--------------------------cccccCCC----------------
Confidence 4543 7899999999999999999999753 22223332
Q ss_pred CCCCCCCCCccchhhhhhhccCCCCccccccCCCcceecCccccccccccccCCCCCCCCChhHHHHHHHHhhhCCC---
Q 048642 218 NNTARDHEGHGTHTLSTAGGNLVPGVNVFGMGNGTAKGGSPKARVAAYKVCWPQVSDGQCFDADILKGFDMAIHDGV--- 294 (782)
Q Consensus 218 ~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~l~~~kv~~~~~~~g~~~~~~i~~ai~~a~~~g~--- 294 (782)
..+.|..||||||||||+|.. .||||+|+|+.+|+++.. |.+..+++++||+|++++++
T Consensus 61 -~~~~d~~gHGT~vAgiia~~~--------------~GvAp~a~i~~~~v~~~~---g~~~~~~~~~ai~~a~~~~~~~~ 122 (279)
T 2pwa_A 61 -YSSRDGNGHGTHCAGTVGSRT--------------YGVAKKTQLFGVKVLDDN---GSGQYSTIIAGMDFVASDKNNRN 122 (279)
T ss_dssp -SCSSCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTT---SCCCHHHHHHHHHHHHHHGGGSC
T ss_pred -CCCCCCCCCHHHHHHHHHhcc--------------cccCCCCEEEEEEeEcCC---CCcCHHHHHHHHHHHHhcCcccc
Confidence 135578999999999999873 799999999999999876 45788999999999999887
Q ss_pred ----eEEEEccCCCCCCCCCCHHHHHHHHHHhcCcEEEEecCCCCCCCC-cccCCCCcEEEEccccCCccceeeEEecCC
Q 048642 295 ----DVISVSLGGDPADYFNDGTAIGAFHAVKHGIVVVCSAANSGPELG-TVTNVSPWIITVGASTLDREFQNFVELRNG 369 (782)
Q Consensus 295 ----dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~-~~~~~~p~vitVgas~~~~~~~~~~~~~~~ 369 (782)
+|||||||.. ....+..++.++.++|++||+||||+|.... .++...+++|+|||++.+
T Consensus 123 ~~~~~Vin~S~G~~----~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~------------ 186 (279)
T 2pwa_A 123 CPKGVVASLSLGGG----YSSSVNSAAARLQSSGVMVAVAAGNNNADARNYSPASEPSVCTVGASDRY------------ 186 (279)
T ss_dssp CTTEEEEEECCCEE----CCHHHHHHHHHHHHTTEEEEEECCSSSSBGGGEETTTCTTSEEEEEECTT------------
T ss_pred CCCccEEEecCCCC----CCHHHHHHHHHHHHCCCEEEEECCCCCCcCCCcCcccCCcEEEEEEecCC------------
Confidence 9999999976 3466788888899999999999999997543 345567999999985431
Q ss_pred eEEeeeeccCCCCCCcccceEecccccccCCCcccccccCCCCCCCCCccceEEEEeeCCcchhhhhHHHHHcCceEEEE
Q 048642 370 QRFKGTSLSKSLPNDTFYPLITGLQAKAANADDTAASLCKNGALDHEKVKGKILVCLRGDTARVDKGRQAAVAGAVGMIL 449 (782)
Q Consensus 370 ~~~~g~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~ 449 (782)
T Consensus 187 -------------------------------------------------------------------------------- 186 (279)
T 2pwa_A 187 -------------------------------------------------------------------------------- 186 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eccCCCCCccccCCCcccEEEEehhhHHHHHHHHhcCCCceEEEecCeeeccCCCCCccccccCCCCCCCCCCCcCCeEE
Q 048642 450 CNDKSSGNEITADPHFLPASQITYKDGVKVLDYIKSSDNPMGYITSPSTYLNAKPSPFMASFSSAGPNKITPEILKPDIT 529 (782)
Q Consensus 450 ~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~ 529 (782)
+.++.||++||.+ ||+
T Consensus 187 --------------------------------------------------------~~~~~~S~~G~~~--------di~ 202 (279)
T 2pwa_A 187 --------------------------------------------------------DRRSSFSNYGSVL--------DIF 202 (279)
T ss_dssp --------------------------------------------------------SBBCTTCCBSTTC--------CEE
T ss_pred --------------------------------------------------------CCcCCcCCCCCcc--------eEE
Confidence 4678999999975 999
Q ss_pred eCCceEEEeecCCCCCCCCCCCCCCcceeeeccccchhhHHHHHHHHHHhhCCCCCHHHHHHHHHhccccccCCCCCCCC
Q 048642 530 APGVNIIAAFTGAIGATELPYDTRRIPYNIMSGTSMSCPHVAGVVGLLKTAHPDWSPSAIRSAIMTTARTRDNTANPMRD 609 (782)
Q Consensus 530 APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~sp~~ik~~L~~TA~~~~~~g~~~~~ 609 (782)
|||++|+++++.+ .|..++|||||||||||++|||+|+ |++++.+||++|++||++...
T Consensus 203 APG~~i~s~~~~~-------------~~~~~sGTS~AaP~VaG~aAll~~~-p~lt~~~v~~~L~~tA~~~~~------- 261 (279)
T 2pwa_A 203 GPGTDILSTWIGG-------------STRSISGTSMATPHVAGLAAYLMTL-GKTTAASACRYIADTANKGDL------- 261 (279)
T ss_dssp EECSSEEEEETTT-------------EEEEECSHHHHHHHHHHHHHHHHHT-TSCCTTTHHHHHHHHSEESCC-------
T ss_pred EecCCeEEeecCC-------------CEEEcCChHHHHHHHHHHHHHHHhC-CCCCHHHHHHHHHHhCccccc-------
Confidence 9999999999864 8899999999999999999999999 999999999999999987531
Q ss_pred CCCCCCCCCcccccccCc
Q 048642 610 GSFKKATPFSYGSGHIRP 627 (782)
Q Consensus 610 ~~~~~~~~~~~G~G~vd~ 627 (782)
..+|+|..|+
T Consensus 262 --------~~~~~g~~n~ 271 (279)
T 2pwa_A 262 --------SNIPFGTVNL 271 (279)
T ss_dssp --------BSCCTTSCCE
T ss_pred --------CCCCCCCccE
Confidence 2467777776
No 30
>1p8j_A Furin precursor; prohormone convertase, SPC1, PACE, P-domain; HET: DKA AR7 NAG FUL BMA MAN GAL FUC; 2.60A {Mus musculus} SCOP: b.18.1.20 c.41.1.1
Probab=100.00 E-value=1.2e-46 Score=426.39 Aligned_cols=295 Identities=16% Similarity=0.177 Sum_probs=218.6
Q ss_pred cCCCccccCCCCCceEEEEecCCcCcCCCCccCCCCCCCCCCccccccCCCCCcccccccccccccchhhHhhhcccccc
Q 048642 134 HSSSAWGKGRFGEDIIIANLDTGVWPESKSFSDEGYGPVPSRWKGTCQNSTKEGVRCNRKLIGARYFNRAYAAYVKQHNI 213 (782)
Q Consensus 134 ~~~~~w~~~~~G~gV~VaVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~~~ki~g~~~~~~~~~~~~~~~~~ 213 (782)
.+..+|..+.+|+||+|||||||||++||+|.++- .....++|.++ ..++
T Consensus 26 ~~~~aw~~g~~G~gv~VaViDtGvd~~Hpdl~~~~------------------------~~~~~~d~~~~------~~~p 75 (471)
T 1p8j_A 26 NVKEAWAQGFTGHGIVVSILDDGIEKNHPDLAGNY------------------------DPGASFDVNDQ------DPDP 75 (471)
T ss_dssp CCHHHHHTTCSCTTCEEEEEEBCCCTTCTTTGGGB------------------------CGGGCEETTTT------BSCC
T ss_pred ChHHHHhcCCCCCCCEEEEEeCCcCCCChhHhhcc------------------------CccCcccccCC------CCCC
Confidence 36789999999999999999999999999998530 00012223221 0000
Q ss_pred cccCCCCCCCCCCccchhhhhhhccCCCCccccccCCCcceecCccccccccccccCCCCCCCCChhHHHHHHHHhhh-C
Q 048642 214 SVNFNNTARDHEGHGTHTLSTAGGNLVPGVNVFGMGNGTAKGGSPKARVAAYKVCWPQVSDGQCFDADILKGFDMAIH-D 292 (782)
Q Consensus 214 ~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~l~~~kv~~~~~~~g~~~~~~i~~ai~~a~~-~ 292 (782)
. +...+.|..||||||||||+|...+ +..+.||||+|+|+.+|+++ +..+++++||+++++ +
T Consensus 76 ~--~~~~~~d~~gHGT~vAGiiaa~~~n--------~~g~~GvAp~a~i~~~rv~~-------g~~~~~~~ai~~a~~~~ 138 (471)
T 1p8j_A 76 Q--PRYTQMNDNRHGTRCAGEVAAVANN--------GVCGVGVAYNARIGGVRMLD-------GEVTDAVEARSLGLNPN 138 (471)
T ss_dssp C--CCCCTTCTTCHHHHHHHHHHCCSSS--------SSSCCCTTTTSEEEEEECSS-------SCCCHHHHHHHHTSCTT
T ss_pred C--CccCCCCCCCcHHHHHHHHHeeccC--------CCCCEEECCCCeEEEEEccC-------CchhHHHHHHHhhhccC
Confidence 0 1124568899999999999997532 22358999999999999985 346789999999999 9
Q ss_pred CCeEEEEccCCCCCC----CCCCHHHHHHHHHHh-----cCcEEEEecCCCCCCCCc----ccCCCCcEEEEccccCCcc
Q 048642 293 GVDVISVSLGGDPAD----YFNDGTAIGAFHAVK-----HGIVVVCSAANSGPELGT----VTNVSPWIITVGASTLDRE 359 (782)
Q Consensus 293 g~dVIn~SlG~~~~~----~~~~~~~~a~~~a~~-----~Gi~vV~AAGN~g~~~~~----~~~~~p~vitVgas~~~~~ 359 (782)
+++|||||||..... .....+..++.++.+ +|++||+||||+|..... ....++++|+|||++.+
T Consensus 139 ~~~Vin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vItVgA~~~~-- 216 (471)
T 1p8j_A 139 HIHIYSASWGPEDDGKTVDGPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGYTNSIYTLSISSATQF-- 216 (471)
T ss_dssp TCCEEEECCBSCCSSSCCBCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCBGGGBTTTTSTTEEEEEEECTT--
T ss_pred CCeEEEeccCcCCCCCcccCcHHHHHHHHHHHHHhhccCCCeEEEEeCCCCCCCCCCcCcCcccCCCceEEEecccCC--
Confidence 999999999986321 122334455555543 699999999999865322 12245899999985431
Q ss_pred ceeeEEecCCeEEeeeeccCCCCCCcccceEecccccccCCCcccccccCCCCCCCCCccceEEEEeeCCcchhhhhHHH
Q 048642 360 FQNFVELRNGQRFKGTSLSKSLPNDTFYPLITGLQAKAANADDTAASLCKNGALDHEKVKGKILVCLRGDTARVDKGRQA 439 (782)
Q Consensus 360 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~ 439 (782)
T Consensus 217 -------------------------------------------------------------------------------- 216 (471)
T 1p8j_A 217 -------------------------------------------------------------------------------- 216 (471)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHcCceEEEEeccCCCCCccccCCCcccEEEEehhhHHHHHHHHhcCCCceEEEecCeeeccCCCCCccccccCCCCCCC
Q 048642 440 AVAGAVGMILCNDKSSGNEITADPHFLPASQITYKDGVKVLDYIKSSDNPMGYITSPSTYLNAKPSPFMASFSSAGPNKI 519 (782)
Q Consensus 440 ~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~ 519 (782)
+.++.||++||..
T Consensus 217 ------------------------------------------------------------------g~~a~~S~~g~~~- 229 (471)
T 1p8j_A 217 ------------------------------------------------------------------GNVPWYSEACSST- 229 (471)
T ss_dssp ------------------------------------------------------------------SCCCTTCCBCTTC-
T ss_pred ------------------------------------------------------------------CCcccccCCCCcc-
Confidence 4678999999987
Q ss_pred CCCCcCCeEEeCCceEEEeecCCCCCCCCCCCCCCcceeeeccccchhhHHHHHHHHHHhhCCCCCHHHHHHHHHhcccc
Q 048642 520 TPEILKPDITAPGVNIIAAFTGAIGATELPYDTRRIPYNIMSGTSMSCPHVAGVVGLLKTAHPDWSPSAIRSAIMTTART 599 (782)
Q Consensus 520 ~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~sp~~ik~~L~~TA~~ 599 (782)
....+|...+||.+|+++.+.+ ..|..++|||||||||||++|||+|++|+|++++||++|++||++
T Consensus 230 -~~~~~~~~~~~g~~i~st~~~~------------~~~~~~sGTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~ 296 (471)
T 1p8j_A 230 -LATTYSSGNQNEKQIVTTDLRQ------------KCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSKP 296 (471)
T ss_dssp -CEEEECCCSTTSCCEEEEETTT------------EEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBC
T ss_pred -eEEeCCCCCCCCCCEEEeeCCC------------CccccCCCcccccchhhhHHHHHHhhCCCCCHHHHHHHHHhcCcc
Confidence 4445566666678999998642 268999999999999999999999999999999999999999998
Q ss_pred ccCCCCCCCCCCCCCCCCCcccccccCccccCCCCccc
Q 048642 600 RDNTANPMRDGSFKKATPFSYGSGHIRPNRAMDPGLVY 637 (782)
Q Consensus 600 ~~~~g~~~~~~~~~~~~~~~~G~G~vd~~~A~~~~lv~ 637 (782)
++.....+.........+..||+|+||+.+|++....+
T Consensus 297 ~~~~~~~~~~n~~g~~~~~~~G~G~vda~~Av~~a~~~ 334 (471)
T 1p8j_A 297 AHLNADDWATNGVGRKVSHSYGYGLLDAGAMVALAQNW 334 (471)
T ss_dssp TTCCCSCCEECTTSCEEBTTTBTCBCCHHHHHHHHHTC
T ss_pred CCCCCCCceecCCCcccCCCCCCEEEcHhHHHHHhhcc
Confidence 86543222221112234678999999999999865443
No 31
>2id4_A Kexin; KEX2, kexin, furin, proprotein, prohormone, convertase, SUBT like protease, serine protease; HET: NDG; 1.90A {Saccharomyces cerevisiae} SCOP: b.18.1.20 c.41.1.1 PDB: 1r64_A* 1ot5_A*
Probab=100.00 E-value=2.6e-46 Score=426.33 Aligned_cols=286 Identities=19% Similarity=0.209 Sum_probs=216.6
Q ss_pred cCCCccccCCCCCceEEEEecCCcCcCCCCccCCCCCCCCCCccccccCCCCCcccccccccccccchhhHhhhcccccc
Q 048642 134 HSSSAWGKGRFGEDIIIANLDTGVWPESKSFSDEGYGPVPSRWKGTCQNSTKEGVRCNRKLIGARYFNRAYAAYVKQHNI 213 (782)
Q Consensus 134 ~~~~~w~~~~~G~gV~VaVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~~~ki~g~~~~~~~~~~~~~~~~~ 213 (782)
.+..+|..+.+|+||+|||||||||++||+|.++- + ..+.++|.++ ..
T Consensus 42 ~~~~aw~~g~tG~gv~VaViDtGvd~~Hpdl~~~~-------~-----------------~~~~~d~~~~------~~-- 89 (503)
T 2id4_A 42 NVLDLWYNNITGAGVVAAIVDDGLDYENEDLKDNF-------C-----------------AEGSWDFNDN------TN-- 89 (503)
T ss_dssp CCHHHHHTTCSCTTCEEEEEESCCCTTSTTTTTTB-------C-----------------GGGCEETTTT------BS--
T ss_pred ChHHHHhcCCCCCCeEEEEEeCCCCCCChhHhhcc-------c-----------------ccCcccCCCC------CC--
Confidence 46789999999999999999999999999998640 0 0112333321 00
Q ss_pred cccCCCCCCCCCCccchhhhhhhccCCCCccccccCCCcceecCccccccccccccCCCCCCCCChhHHHHHHHHhhhCC
Q 048642 214 SVNFNNTARDHEGHGTHTLSTAGGNLVPGVNVFGMGNGTAKGGSPKARVAAYKVCWPQVSDGQCFDADILKGFDMAIHDG 293 (782)
Q Consensus 214 ~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~l~~~kv~~~~~~~g~~~~~~i~~ai~~a~~~g 293 (782)
+.....|..||||||||||+|...++ ..+.||||+|+|+.+|+++. .+...++++||+|+++++
T Consensus 90 ---~~~p~~d~~gHGT~vAGiiaa~~~n~--------~~~~GvAp~a~i~~~rv~~~-----~~~~~~~~~ai~~a~~~~ 153 (503)
T 2id4_A 90 ---LPKPRLSDDYHGTRCAGEIAAKKGNN--------FCGVGVGYNAKISGIRILSG-----DITTEDEAASLIYGLDVN 153 (503)
T ss_dssp ---CCCCCSTTTTHHHHHHHHHHCCSSSS--------SSCCCTTTTSEEEEEECTTS-----CCCHHHHHHHTTTTTTTC
T ss_pred ---CCCCCCCCCChHHHHHHHHHhccCCC--------CCcEEECCCCEEEEEEeeCC-----CCChHHHHHHHHhHhhcC
Confidence 11223578899999999999975322 23489999999999999973 367889999999999998
Q ss_pred CeEEEEccCCCCCC----CCCCHHHHHHHHHH-----hcCcEEEEecCCCCCCCC--cccC--CCCcEEEEccccCCccc
Q 048642 294 VDVISVSLGGDPAD----YFNDGTAIGAFHAV-----KHGIVVVCSAANSGPELG--TVTN--VSPWIITVGASTLDREF 360 (782)
Q Consensus 294 ~dVIn~SlG~~~~~----~~~~~~~~a~~~a~-----~~Gi~vV~AAGN~g~~~~--~~~~--~~p~vitVgas~~~~~~ 360 (782)
+|||||||..... .....+..++.++. .+|++||+||||+|.... .++. .++++|+|||++.+
T Consensus 154 -~Iin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~r~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vI~VgA~~~~--- 229 (503)
T 2id4_A 154 -DIYSCSWGPADDGRHLQGPSDLVKKALVKGVTEGRDSKGAIYVFASGNGGTRGDNCNYDGYTNSIYSITIGAIDHK--- 229 (503)
T ss_dssp -SEEEECEESCCSSSCCBCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCCGGGBTTTTCTTEEEEEEECTT---
T ss_pred -CEEEeCCCcCCCCccccCchHHHHHHHHHHHHhcccCCCcEEEEecCCCCCcCCCCCCCcccCCCCEEEEEeeCCC---
Confidence 9999999986311 12234566666665 479999999999996432 2222 46789999985432
Q ss_pred eeeEEecCCeEEeeeeccCCCCCCcccceEecccccccCCCcccccccCCCCCCCCCccceEEEEeeCCcchhhhhHHHH
Q 048642 361 QNFVELRNGQRFKGTSLSKSLPNDTFYPLITGLQAKAANADDTAASLCKNGALDHEKVKGKILVCLRGDTARVDKGRQAA 440 (782)
Q Consensus 361 ~~~~~~~~~~~~~g~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~ 440 (782)
T Consensus 230 -------------------------------------------------------------------------------- 229 (503)
T 2id4_A 230 -------------------------------------------------------------------------------- 229 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HcCceEEEEeccCCCCCccccCCCcccEEEEehhhHHHHHHHHhcCCCceEEEecCeeeccCCCCCccccccCCCCCCCC
Q 048642 441 VAGAVGMILCNDKSSGNEITADPHFLPASQITYKDGVKVLDYIKSSDNPMGYITSPSTYLNAKPSPFMASFSSAGPNKIT 520 (782)
Q Consensus 441 ~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~ 520 (782)
+.++.||++||..
T Consensus 230 -----------------------------------------------------------------~~~a~~S~~g~~~-- 242 (503)
T 2id4_A 230 -----------------------------------------------------------------DLHPPYSEGCSAV-- 242 (503)
T ss_dssp -----------------------------------------------------------------SCCCTTCCCCTTE--
T ss_pred -----------------------------------------------------------------CCcCCcCCCCCcc--
Confidence 4678999999987
Q ss_pred CCCcCCeEEe----CCceEEEeecCCCCCCCCCCCCCCcceeeeccccchhhHHHHHHHHHHhhCCCCCHHHHHHHHHhc
Q 048642 521 PEILKPDITA----PGVNIIAAFTGAIGATELPYDTRRIPYNIMSGTSMSCPHVAGVVGLLKTAHPDWSPSAIRSAIMTT 596 (782)
Q Consensus 521 ~~~~KPDI~A----PG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~sp~~ik~~L~~T 596 (782)
|++| ||..|+++.... ..|..++|||||||||||++|||+|++|+|++++||++|++|
T Consensus 243 ------~~~a~~~gpG~~I~st~~~~------------~~~~~~sGTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~t 304 (503)
T 2id4_A 243 ------MAVTYSSGSGEYIHSSDING------------RCSNSHGGTSAAAPLAAGVYTLLLEANPNLTWRDVQYLSILS 304 (503)
T ss_dssp ------EEEEECSBTTBCEEEECSTT------------CEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHH
T ss_pred ------eEeecCCCCCCceEeecCCC------------CceecCCCccccchhhhHHHHHHHHhCCCCCHHHHHHHHHhc
Confidence 8887 899999995431 279999999999999999999999999999999999999999
Q ss_pred cccccCC-CCCCCCCCCCCCCCCcccccccCccccCCCCcc
Q 048642 597 ARTRDNT-ANPMRDGSFKKATPFSYGSGHIRPNRAMDPGLV 636 (782)
Q Consensus 597 A~~~~~~-g~~~~~~~~~~~~~~~~G~G~vd~~~A~~~~lv 636 (782)
|+++... ...+.........+..||+|+||+.+|++....
T Consensus 305 A~~~~~~~~~~~~~~~~g~~~~~~~G~G~vda~~Av~~a~~ 345 (503)
T 2id4_A 305 AVGLEKNADGDWRDSAMGKKYSHRYGFGKIDAHKLIEMSKT 345 (503)
T ss_dssp CBCCTTCGGGCCEECSSSSEEBTTTBTCBCCHHHHHHHHTS
T ss_pred cccCCCCcCCCceecCCCCccCcccCCcEecHHHHHHHHhc
Confidence 9987643 111111111223456899999999999985443
No 32
>2qtw_B Proprotein convertase subtilisin/kexin type 9; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_B 3bps_A 3gcw_A 3gcx_A 3p5b_A 3p5c_A 2pmw_B 3h42_B 2w2n_A 2w2m_A 2w2p_A 2w2q_A 2xtj_A 2w2o_A
Probab=100.00 E-value=3.9e-46 Score=417.22 Aligned_cols=291 Identities=19% Similarity=0.200 Sum_probs=204.8
Q ss_pred cccccCCccc-CCCccccCCCCCceEEEEecCCcCcCCCCccCCCCCCCCCCccccccCCCCCcccccccccccccchhh
Q 048642 125 MLLENNGVIH-SSSAWGKGRFGEDIIIANLDTGVWPESKSFSDEGYGPVPSRWKGTCQNSTKEGVRCNRKLIGARYFNRA 203 (782)
Q Consensus 125 ~g~~~~~~~~-~~~~w~~~~~G~gV~VaVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~~~ki~g~~~~~~~ 203 (782)
|+|..+.+.. ....|..+.+|+||+|+|||||||++||+|.++- ......+...
T Consensus 4 WgL~rI~~~~~~~~aw~~~~tG~GV~VaVIDTGId~~HpdL~gr~-------------------------~~~~~~~v~~ 58 (546)
T 2qtw_B 4 WNLERITPPRYRADEYQPPDGGSLVEVYLLDTSIQSDHREIEGRV-------------------------MVTDFENVPE 58 (546)
T ss_dssp HHHHHTSCSSCC--------CCTTSEEEEEESCCCTTSTTTTTTE-------------------------EEEEEECCCC
T ss_pred CChhhcCCCcccchhcccCCCCCCcEEEEECCCCCCCChHHcccc-------------------------cccCcccccC
Confidence 4555444322 2347888999999999999999999999998640 0000000000
Q ss_pred HhhhcccccccccCCCCCCCCCCccchhhhhhhccCCCCccccccCCCcceecCccccccccccccCCCCCCCCChhHHH
Q 048642 204 YAAYVKQHNISVNFNNTARDHEGHGTHTLSTAGGNLVPGVNVFGMGNGTAKGGSPKARVAAYKVCWPQVSDGQCFDADIL 283 (782)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~l~~~kv~~~~~~~g~~~~~~i~ 283 (782)
.++ .+ ....+.|..||||||||||+|+. .||||+|+|+.+|+++.. |.+..++++
T Consensus 59 ---~dg-~~----f~~~~~D~~GHGThVAGIIag~~--------------~GVAP~A~L~~vkVl~~~---G~g~~s~ii 113 (546)
T 2qtw_B 59 ---EDG-TR----FHRQASKCDSHGTHLAGVVSGRD--------------AGVAKGASMRSLRVLNCQ---GKGTVSGTL 113 (546)
T ss_dssp ---CC------------CTTTTHHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTT---SEEEHHHHH
T ss_pred ---CCC-cc----ccCCCCCCCChHHHHHHHHhccC--------------CCcCCCCEEEEEEEECCC---CCcCHHHHH
Confidence 000 00 01245688999999999999873 699999999999999876 467888999
Q ss_pred HHHHHhhhC------CCeEEEEccCCCCCCCCCCHHHHHHHHHHhcCcEEEEecCCCCCCCCc-ccCCCCcEEEEccccC
Q 048642 284 KGFDMAIHD------GVDVISVSLGGDPADYFNDGTAIGAFHAVKHGIVVVCSAANSGPELGT-VTNVSPWIITVGASTL 356 (782)
Q Consensus 284 ~ai~~a~~~------g~dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~-~~~~~p~vitVgas~~ 356 (782)
+||+|+++. +++|||||||.. ....+..++.++.++|++||+||||+|..... .+...+++|+|||++.
T Consensus 114 ~ai~~a~~~~~~~~~g~~VINmSlGg~----~s~~l~~Ai~~A~~~GvlvVaAAGN~g~d~~~~sPAs~~~VItVGA~d~ 189 (546)
T 2qtw_B 114 IGLEFIRKSQLVQPVGPLVVLLPLAGG----YSRVLNAACQRLARAGVVLVTAAGNFRDDACLYSPASAPEVITVGATNA 189 (546)
T ss_dssp HHHHHHHHHHHHSCCSCEEEEECEEEE----CCHHHHHHHHHHHHTTCEEEEECCSBSSBGGGEETTTCTTSEEEEEECT
T ss_pred HHHHHHHHhhhhccCCCeEEEecCCCC----CcHHHHHHHHHHHhCCCEEEEECCCCCCCCCccCcccCCCEEEEEEecC
Confidence 999999974 999999999976 34567888889999999999999999975432 3556799999998654
Q ss_pred CccceeeEEecCCeEEeeeeccCCCCCCcccceEecccccccCCCcccccccCCCCCCCCCccceEEEEeeCCcchhhhh
Q 048642 357 DREFQNFVELRNGQRFKGTSLSKSLPNDTFYPLITGLQAKAANADDTAASLCKNGALDHEKVKGKILVCLRGDTARVDKG 436 (782)
Q Consensus 357 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~ 436 (782)
+...
T Consensus 190 ~g~~---------------------------------------------------------------------------- 193 (546)
T 2qtw_B 190 QDQP---------------------------------------------------------------------------- 193 (546)
T ss_dssp TSCB----------------------------------------------------------------------------
T ss_pred CCCc----------------------------------------------------------------------------
Confidence 3200
Q ss_pred HHHHHcCceEEEEeccCCCCCccccCCCcccEEEEehhhHHHHHHHHhcCCCceEEEecCeeeccCCCCCccccccCCCC
Q 048642 437 RQAAVAGAVGMILCNDKSSGNEITADPHFLPASQITYKDGVKVLDYIKSSDNPMGYITSPSTYLNAKPSPFMASFSSAGP 516 (782)
Q Consensus 437 ~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp 516 (782)
...-..||++|+
T Consensus 194 --------------------------------------------------------------------a~~s~~fSn~G~ 205 (546)
T 2qtw_B 194 --------------------------------------------------------------------VTLGTLGTNFGR 205 (546)
T ss_dssp --------------------------------------------------------------------CEETTEECCBST
T ss_pred --------------------------------------------------------------------ccccCCcCCCCC
Confidence 000123899998
Q ss_pred CCCCCCCcCCeEEeCCceEEEeecCCCCCCCCCCCCCCcceeeeccccchhhHHHHHHHHHHhhCCCCCHHHHHHHHHhc
Q 048642 517 NKITPEILKPDITAPGVNIIAAFTGAIGATELPYDTRRIPYNIMSGTSMSCPHVAGVVGLLKTAHPDWSPSAIRSAIMTT 596 (782)
Q Consensus 517 ~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~sp~~ik~~L~~T 596 (782)
. |||+|||++|+++++... ..|..++|||||||||||++|||+|++|+++|+|||++|++|
T Consensus 206 ~--------vDI~APG~~I~St~~~~~-----------~~y~~~SGTSmAAP~VAG~aALlls~~P~ltp~qVr~~L~~t 266 (546)
T 2qtw_B 206 C--------VDLFAPGEDIIGASSDCS-----------TCFVSQSGTSQAAAHVAGIAAMMLSAEPELTLAELRQRLIHF 266 (546)
T ss_dssp T--------CCEEEECSSEEEECTTST-----------TCEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHT
T ss_pred c--------ceEEecCccEEeeccCCC-----------CcEeeeCcCcHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHh
Confidence 5 499999999999987642 279999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCC-----CCC----CCCCCCCcccccc--cCccccCC
Q 048642 597 ARTRDNTANPMR-----DGS----FKKATPFSYGSGH--IRPNRAMD 632 (782)
Q Consensus 597 A~~~~~~g~~~~-----~~~----~~~~~~~~~G~G~--vd~~~A~~ 632 (782)
|.+.......+. ... ..+.....+|+|+ .++..+..
T Consensus 267 At~~~i~~~~~p~~~~~~tpN~l~~~~~~~~~~G~~l~~~~~w~a~s 313 (546)
T 2qtw_B 267 SAKDVINEAWFPEDQRVLTPNLVAALPPSTHGAGWQLFCRTVWSAHS 313 (546)
T ss_dssp SEESCSCGGGSCHHHHTTSCCEECCCCCTTCC--CCCEEEEEECCCC
T ss_pred ccccccCCccCccccCCCCccchhccCCcccccCCCcchhchhccCC
Confidence 976432111000 000 1111355678888 77766664
No 33
>3f7m_A Alkaline serine protease VER112; verticillium psalliotae, cuticle- degrading protease, nematodes, hydrolase, secreted, zymogen; 1.60A {Lecanicillium psalliotae} SCOP: c.41.1.1 PDB: 3f7o_A
Probab=100.00 E-value=5.6e-46 Score=392.91 Aligned_cols=230 Identities=30% Similarity=0.404 Sum_probs=195.8
Q ss_pred CccccCCCCCceEEEEecCCcCcCCCCccCCCCCCCCCCccccccCCCCCcccccccccccccchhhHhhhccccccccc
Q 048642 137 SAWGKGRFGEDIIIANLDTGVWPESKSFSDEGYGPVPSRWKGTCQNSTKEGVRCNRKLIGARYFNRAYAAYVKQHNISVN 216 (782)
Q Consensus 137 ~~w~~~~~G~gV~VaVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~~~ki~g~~~~~~~~~~~~~~~~~~~~ 216 (782)
.+|+.. +|+||+|||||||||++||+|.++ +...+.|..
T Consensus 24 ~~~~~~-~G~gv~VaViDtGvd~~h~~l~~~--------------------------~~~~~~~~~-------------- 62 (279)
T 3f7m_A 24 YAYDTS-AGAGACVYVIDTGVEDTHPDFEGR--------------------------AKQIKSYAS-------------- 62 (279)
T ss_dssp EEECTT-TTTTEEEEEEESCCCTTCGGGTTC--------------------------EEEEEECSS--------------
T ss_pred eeecCC-CCCCCEEEEEcCCCCCCChhhccc--------------------------cccccCCCC--------------
Confidence 466666 999999999999999999999753 222233321
Q ss_pred CCCCCCCCCCccchhhhhhhccCCCCccccccCCCcceecCccccccccccccCCCCCCCCChhHHHHHHHHhhhCC---
Q 048642 217 FNNTARDHEGHGTHTLSTAGGNLVPGVNVFGMGNGTAKGGSPKARVAAYKVCWPQVSDGQCFDADILKGFDMAIHDG--- 293 (782)
Q Consensus 217 ~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~l~~~kv~~~~~~~g~~~~~~i~~ai~~a~~~g--- 293 (782)
...|..||||||||||+|+. .||||+|+|+.+|+++.. +.+..+++++||+|+++++
T Consensus 63 ---~~~d~~gHGT~vAgii~~~~--------------~GvAp~a~l~~~~v~~~~---~~~~~~~~~~ai~~~~~~~~~~ 122 (279)
T 3f7m_A 63 ---TARDGHGHGTHCAGTIGSKT--------------WGVAKKVSIFGVKVLDDS---GSGSLSNIIAGMDFVASDRQSR 122 (279)
T ss_dssp ---SSSCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTT---SCCCHHHHHHHHHHHHHHGGGS
T ss_pred ---CCCCCCCcHHHHHHHHhcCc--------------cccCCCCEEEEEEeeCCC---CCcCHHHHHHHHHHHHhccccc
Confidence 22388999999999999873 699999999999999876 4678999999999999876
Q ss_pred ----CeEEEEccCCCCCCCCCCHHHHHHHHHHhcCcEEEEecCCCCCCCCcc-cCCCCcEEEEccccCCccceeeEEecC
Q 048642 294 ----VDVISVSLGGDPADYFNDGTAIGAFHAVKHGIVVVCSAANSGPELGTV-TNVSPWIITVGASTLDREFQNFVELRN 368 (782)
Q Consensus 294 ----~dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~-~~~~p~vitVgas~~~~~~~~~~~~~~ 368 (782)
++|||||||.. ....+..++.++.++|++||+||||+|...... +...+++|+|||++.
T Consensus 123 ~~~~~~Vin~S~g~~----~~~~~~~a~~~a~~~gv~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~------------ 186 (279)
T 3f7m_A 123 NCPRRTVASMSLGGG----YSAALNQAAARLQSSGVFVAVAAGNDNRDAANTSPASEPTVCTVGATDS------------ 186 (279)
T ss_dssp CCTTEEEEEECCCEE----CCHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECT------------
T ss_pred cCCCCeEEEeCCCcC----ccHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCcCCCCCCCEEEEeecCC------------
Confidence 99999999976 456788888899999999999999999764433 556789999998542
Q ss_pred CeEEeeeeccCCCCCCcccceEecccccccCCCcccccccCCCCCCCCCccceEEEEeeCCcchhhhhHHHHHcCceEEE
Q 048642 369 GQRFKGTSLSKSLPNDTFYPLITGLQAKAANADDTAASLCKNGALDHEKVKGKILVCLRGDTARVDKGRQAAVAGAVGMI 448 (782)
Q Consensus 369 ~~~~~g~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i 448 (782)
T Consensus 187 -------------------------------------------------------------------------------- 186 (279)
T 3f7m_A 187 -------------------------------------------------------------------------------- 186 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EeccCCCCCccccCCCcccEEEEehhhHHHHHHHHhcCCCceEEEecCeeeccCCCCCccccccCCCCCCCCCCCcCCeE
Q 048642 449 LCNDKSSGNEITADPHFLPASQITYKDGVKVLDYIKSSDNPMGYITSPSTYLNAKPSPFMASFSSAGPNKITPEILKPDI 528 (782)
Q Consensus 449 ~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI 528 (782)
.+.++.||++||.. ||
T Consensus 187 --------------------------------------------------------~~~~~~~S~~g~~~--------di 202 (279)
T 3f7m_A 187 --------------------------------------------------------NDVRSTFSNYGRVV--------DI 202 (279)
T ss_dssp --------------------------------------------------------TSBBCTTCCBSTTC--------CE
T ss_pred --------------------------------------------------------CCCCCCCCCCCCCC--------eE
Confidence 24778999999976 99
Q ss_pred EeCCceEEEeecCCCCCCCCCCCCCCcceeeeccccchhhHHHHHHHHHHhhCCCCCHHHHHHHHHhcccccc
Q 048642 529 TAPGVNIIAAFTGAIGATELPYDTRRIPYNIMSGTSMSCPHVAGVVGLLKTAHPDWSPSAIRSAIMTTARTRD 601 (782)
Q Consensus 529 ~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~sp~~ik~~L~~TA~~~~ 601 (782)
+|||++|+++++.+ .|..++|||||||+|||++|||+|++|. ++++||++|++||++..
T Consensus 203 ~ApG~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~p~-t~~~v~~~L~~tA~~~~ 261 (279)
T 3f7m_A 203 FAPGTSITSTWIGG-------------RTNTISGTSMATPHIAGLAAYLFGLEGG-SAGAMCGRIQTLSTKNV 261 (279)
T ss_dssp EEECSSEEEECGGG-------------CEEEECSHHHHHHHHHHHHHHHHHHTCC-CTTTHHHHHHHHSEESC
T ss_pred EECCCCeEeecCCC-------------CEEEeeEHHHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHHhccccc
Confidence 99999999999864 7899999999999999999999999999 99999999999998753
No 34
>3hjr_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria}
Probab=100.00 E-value=8.4e-45 Score=425.03 Aligned_cols=301 Identities=20% Similarity=0.212 Sum_probs=206.0
Q ss_pred cCCCccccCCCCCceEEEEecCCcCcCCCCccCCCCCCCCCCccccccCCCCCcccccccccccccchhhHhhhcccccc
Q 048642 134 HSSSAWGKGRFGEDIIIANLDTGVWPESKSFSDEGYGPVPSRWKGTCQNSTKEGVRCNRKLIGARYFNRAYAAYVKQHNI 213 (782)
Q Consensus 134 ~~~~~w~~~~~G~gV~VaVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~~~ki~g~~~~~~~~~~~~~~~~~ 213 (782)
++..+|..+++|+||+|||||||||++||||.++ ...+.++|..+..
T Consensus 58 nv~~aw~~g~tG~GV~VaViDtGid~~HpDL~~n-------------------------~~~~~~~~~~~~~-------- 104 (600)
T 3hjr_A 58 NLWWAHRTGVLGQGVNVAVVDDGLAIAHPDLADN-------------------------VRPGSKNVVTGSD-------- 104 (600)
T ss_dssp CCHHHHHHTCSCTTCEEEEESSCCCTTCTTTGGG-------------------------BCSCCBCTTTSSS--------
T ss_pred CHHHHHHcCCCCCCeEEEEEcCCCCCCChhHhhc-------------------------cccCcceeecCCC--------
Confidence 4678999999999999999999999999999854 0112233322210
Q ss_pred cccCCCCCCCCCCccchhhhhhhccCCCCccccccCCCcceecCccccccccccccCCCCCCCCChhHHHHHH-HHhhhC
Q 048642 214 SVNFNNTARDHEGHGTHTLSTAGGNLVPGVNVFGMGNGTAKGGSPKARVAAYKVCWPQVSDGQCFDADILKGF-DMAIHD 292 (782)
Q Consensus 214 ~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~l~~~kv~~~~~~~g~~~~~~i~~ai-~~a~~~ 292 (782)
+.....|.+||||||||||||.. ++..+.||||+|+|+.+|++++. +.+..++++.|+ +++..+
T Consensus 105 ---dp~p~~~~~gHGThVAGiIAa~~---------n~~g~~GVAp~A~l~~~rvl~~~---~~~~~~~~~~a~~~~~~~~ 169 (600)
T 3hjr_A 105 ---DPTPTDPDTAHGTSVSGIIAAVD---------NAIGTKGIAPRAQLQGFNLLDDN---SQQLQKDWLYALGDSNASR 169 (600)
T ss_dssp ---CCCCCSTTCCHHHHHHHHHHCCS---------SSSSCCCSSTTCEEEEECTTSTT---CCCCHHHHHHHTTSSHHHH
T ss_pred ---CCCCCCCCCChHHHHHHHHhEeC---------CCCCcEEeCCCCEEEEEEeecCC---CCccHHHHHHHhhhhhhhc
Confidence 12234467899999999999863 12234899999999999999876 456777777776 567788
Q ss_pred CCeEEEEccCCCC-CCCCCCHH-----HHHHHH--HHhcCcEEEEecCCCCCCCCc----------------------cc
Q 048642 293 GVDVISVSLGGDP-ADYFNDGT-----AIGAFH--AVKHGIVVVCSAANSGPELGT----------------------VT 342 (782)
Q Consensus 293 g~dVIn~SlG~~~-~~~~~~~~-----~~a~~~--a~~~Gi~vV~AAGN~g~~~~~----------------------~~ 342 (782)
+++|||+|||... .....+.. ..++.. ...+|+++|+||||.+..... ..
T Consensus 170 ~~~I~n~S~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~AaGNg~~~~~~~~~~~~~~g~~~~~~~~~~~~d~~ 249 (600)
T 3hjr_A 170 DNRVFNQSYGMSVVDPRSANSLDQSQLDRLFEQQTLKAQGAAYIKAAGNGFNKIAAGGYVLNRTGNGPKLPFENSNLDPS 249 (600)
T ss_dssp TCSEEEECCCCCCSSCCCSCSHHHHHHHHHHHHHHHSTTCCEEEEECCSCSSEEEETTEEEEEESSCCCCCSSBTTSSGG
T ss_pred CCCEEecccCccccCCccCCcchhhhHHHHHHHhhhccCCcEEEEeccCccccccccccccccCCCCCCCCcccccccCc
Confidence 9999999999762 11222221 112221 226899999999997632100 00
Q ss_pred CCCCcEEEEccccCCccceeeEEecCCeEEeeeeccCCCCCCcccceEecccccccCCCcccccccCCCCCCCCCccceE
Q 048642 343 NVSPWIITVGASTLDREFQNFVELRNGQRFKGTSLSKSLPNDTFYPLITGLQAKAANADDTAASLCKNGALDHEKVKGKI 422 (782)
Q Consensus 343 ~~~p~vitVgas~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gki 422 (782)
...+++|+|||++
T Consensus 250 ~~~~~~IsVgA~~------------------------------------------------------------------- 262 (600)
T 3hjr_A 250 NSNFWNLVVSALN------------------------------------------------------------------- 262 (600)
T ss_dssp GGSSSEEEEEEEC-------------------------------------------------------------------
T ss_pred cccCcceEEeeec-------------------------------------------------------------------
Confidence 0122333333321
Q ss_pred EEEeeCCcchhhhhHHHHHcCceEEEEeccCCCCCccccCCCcccEEEEehhhHHHHHHHHhcCCCceEEEecCeeeccC
Q 048642 423 LVCLRGDTARVDKGRQAAVAGAVGMILCNDKSSGNEITADPHFLPASQITYKDGVKVLDYIKSSDNPMGYITSPSTYLNA 502 (782)
Q Consensus 423 vl~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~ 502 (782)
T Consensus 263 -------------------------------------------------------------------------------- 262 (600)
T 3hjr_A 263 -------------------------------------------------------------------------------- 262 (600)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCccccccCCCCCCCCCCCcCCeEEeCCceE--------EEeecCCCCCC-------------CCCCCCCCcceeeec
Q 048642 503 KPSPFMASFSSAGPNKITPEILKPDITAPGVNI--------IAAFTGAIGAT-------------ELPYDTRRIPYNIMS 561 (782)
Q Consensus 503 ~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I--------~sa~~~~~~~~-------------~~~~~~~~~~y~~~s 561 (782)
..+.++.||++|+.. +++|||.++ .+..++..... ....+.....|..++
T Consensus 263 -~~g~~a~yS~~G~~v--------~~~apg~~~~~~~~~~vt~~~pG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 333 (600)
T 3hjr_A 263 -ADGVRSSYSSVGSNI--------FLSATGGEYGTDTPAMVTTDLPGCDMGYNRTDDPSTNRLHGNSQLDASCDYNGVMN 333 (600)
T ss_dssp -TTSSBCTTCCBCTTC--------CEEEECCSCSSSSCCEEEECCSSTTSSSSSTTSCCSSTTTTCTTTCTTCCEEEEEC
T ss_pred -CCCCEeecccCCcce--------eeccCCCCCCCCCcceeeecCCCccccccccCCccccccccccccCCCCCceeccc
Confidence 235789999999987 999999762 22222211000 001122345688999
Q ss_pred cccchhhHHHHHHHHHHhhCCCCCHHHHHHHHHhccccccCCCCCCC--------------------CCCCCCCCCCccc
Q 048642 562 GTSMSCPHVAGVVGLLKTAHPDWSPSAIRSAIMTTARTRDNTANPMR--------------------DGSFKKATPFSYG 621 (782)
Q Consensus 562 GTSmAaP~VAG~aALl~q~~p~~sp~~ik~~L~~TA~~~~~~g~~~~--------------------~~~~~~~~~~~~G 621 (782)
|||||||||||++|||+|++|+|+++|||++|++||++++....|+. ...........||
T Consensus 334 GTSmAaP~VAGvaALll~a~P~lt~~~v~~~L~~TA~~~d~~~~p~~~~~~~~~~~~~~~~~~~~w~~N~aG~~~s~~yG 413 (600)
T 3hjr_A 334 GTSSATPSTSGAMALLMSAYPDLSVRDLRDLLARSATRVDAKHQPVMVSYTSSTGKVRDVKGLEGWERNAAGMWFSPTYG 413 (600)
T ss_dssp SHHHHHHHHHHHHHHHHHHSTTSCHHHHHHHHHHHCBCCSTTCCCEEEEEECTTSCEEEEEEECCSEECTTSCEEBTTTB
T ss_pred cccccchhHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCCCCCCcccccccccccccccccccCCcccccCCceEccccC
Confidence 99999999999999999999999999999999999999987665522 1111222356799
Q ss_pred ccccCccccCCCCcccc
Q 048642 622 SGHIRPNRAMDPGLVYD 638 (782)
Q Consensus 622 ~G~vd~~~A~~~~lv~~ 638 (782)
+|+||+.+|++....+.
T Consensus 414 fG~vDA~~aV~~A~~w~ 430 (600)
T 3hjr_A 414 FGLIDVNKALELAANHQ 430 (600)
T ss_dssp TCBCCHHHHHHHHTTCC
T ss_pred CceecHHHHHHHhhcCc
Confidence 99999999998554443
No 35
>1t1e_A Kumamolisin; proenzyme, prosubtilase, activation mechanism, sedolisin, serine-carboxyl proteinase, hydrolase; 1.18A {Bacillus SP} SCOP: c.41.1.2 d.58.3.2 PDB: 1t1g_A 1t1i_A 1gt9_1 1gtg_1 1gtj_1* 1gtl_1* 1sio_A* 1sn7_A 1zvj_A 1siu_A 1zvk_A
Probab=99.91 E-value=2.2e-25 Score=254.34 Aligned_cols=97 Identities=25% Similarity=0.394 Sum_probs=76.5
Q ss_pred cceecCccccccccccccCCCCCCCCChhHHHHHHHHhhh---CCCeEEEEccCCCCCCC---CCCHHHHHHHHHHhcCc
Q 048642 252 TAKGGSPKARVAAYKVCWPQVSDGQCFDADILKGFDMAIH---DGVDVISVSLGGDPADY---FNDGTAIGAFHAVKHGI 325 (782)
Q Consensus 252 ~~~GvAP~A~l~~~kv~~~~~~~g~~~~~~i~~ai~~a~~---~g~dVIn~SlG~~~~~~---~~~~~~~a~~~a~~~Gi 325 (782)
.+.||||+|+|+.|++. ...+.++++|+||++ ++++|||||||.....+ ....+..++.+|..+||
T Consensus 273 ~~~gvAp~a~i~~~~~~--------~~~~~~~~ai~~av~~~~~~~~VIS~S~G~~e~~~~~~~~~~~~~~~~~a~~~Gi 344 (552)
T 1t1e_A 273 VAGALAPGAKIAVYFAP--------NTDAGFLNAITTAVHDPTHKPSIVSISWGGPEDSWAPASIAAMNRAFLDAAALGV 344 (552)
T ss_dssp HHHHHCTTSEEEEEECC--------SSHHHHHHHHHHHHTCTTTCCSEEEECEEEEGGGSCHHHHHHHHHHHHHHHHTTC
T ss_pred hhhccCCCCeEEEEEcC--------CCCchHHHHHHHHHhcccCCCCEEEecccCCcccCCHHHHHHHHHHHHHHHhCCe
Confidence 46899999999999973 245689999999998 79999999999873211 12346666777889999
Q ss_pred EEEEecCCCCCCC--------CcccCCCCcEEEEccccC
Q 048642 326 VVVCSAANSGPEL--------GTVTNVSPWIITVGASTL 356 (782)
Q Consensus 326 ~vV~AAGN~g~~~--------~~~~~~~p~vitVgas~~ 356 (782)
+||+||||+|... -.++..+|+|++||+++.
T Consensus 345 ~vv~AsGd~G~~~~~~~~~~~~~~PAs~P~V~aVGat~~ 383 (552)
T 1t1e_A 345 TVLAAAGDSGSTDGEQDGLYHVDFPAASPYVLACGGTRL 383 (552)
T ss_dssp EEEEECCSBGGGTTCCSSSCCCEETTTSTTSEEEEEEEE
T ss_pred EEEEecCCCCCCCCCCCCcccccCcccCCCEEEEecccc
Confidence 9999999999643 234456799999999764
No 36
>1ga6_A Serine-carboxyl proteinase; serine-carboxyl proteinase, hydrolase-hydrolase inhibitor CO; 1.00A {Pseudomonas SP} SCOP: c.41.1.2 PDB: 1ga4_A* 1ga1_A 1kdv_A* 1kdy_A* 1kdz_A* 1ke1_A* 1ke2_A* 1nlu_A*
Probab=99.85 E-value=6.4e-22 Score=215.20 Aligned_cols=100 Identities=21% Similarity=0.174 Sum_probs=78.6
Q ss_pred eecCccccccccccccCCCCCCCCChhHHHHHHHHhhh-CCCeEEEEccCCCCC----CCCCCHHHHHHHHHHhcCcEEE
Q 048642 254 KGGSPKARVAAYKVCWPQVSDGQCFDADILKGFDMAIH-DGVDVISVSLGGDPA----DYFNDGTAIGAFHAVKHGIVVV 328 (782)
Q Consensus 254 ~GvAP~A~l~~~kv~~~~~~~g~~~~~~i~~ai~~a~~-~g~dVIn~SlG~~~~----~~~~~~~~~a~~~a~~~Gi~vV 328 (782)
..+||+++++.|++.+.. .+..++++++|+||++ ++++|||||||.... ..+.+.+..++.+|..+||+||
T Consensus 90 g~~aP~a~~~~~~~~~~~----~~~~~~~~~ai~~av~~~~~~ViS~S~G~~e~~~~~~~~~~~~~~~~~~a~~~Gitvv 165 (372)
T 1ga6_A 90 GSAGGAVQQLLFYMADQS----ASGNTGLTQAFNQAVSDNVAKVINVSLGWCEADANADGTLQAEDRIFATAAAQGQTFS 165 (372)
T ss_dssp HHTTSCEEEEEEEEECTT----SSTTHHHHHHHHHHHHHCCCSEEEECCCEEHHHHHHTTHHHHHHHHHHHHHHTTCEEE
T ss_pred hhcCCCCcEEEEEeCCCC----CcccHHHHHHHHHHHhcCCCCEEEeCCCCCCCCCchHHHHHHHHHHHHHHHhCCcEEE
Confidence 346899999999997654 3677889999999998 899999999998621 1123456667777889999999
Q ss_pred EecCCCCCCCC-------------cccCCCCcEEEEccccCC
Q 048642 329 CSAANSGPELG-------------TVTNVSPWIITVGASTLD 357 (782)
Q Consensus 329 ~AAGN~g~~~~-------------~~~~~~p~vitVgas~~~ 357 (782)
+||||+|...+ .++..+|+|++||+++..
T Consensus 166 ~AsGd~G~~~~~~~g~~~~~~~~~~~PAs~P~V~aVGat~~~ 207 (372)
T 1ga6_A 166 VSSGDEGVYECNNRGYPDGSTYSVSWPASSPNVIAVGGTTLY 207 (372)
T ss_dssp EECCSBTTBTTTTTTCCCTTCCBCEETTTCTTSEEEEEEEEE
T ss_pred EEECCCCCccccccCccCCccCCcCCCCCCCCeEEEEeeecc
Confidence 99999996532 233467999999997643
No 37
>3edy_A Tripeptidyl-peptidase 1; protease, TPP1, sedolisin, batten disease, lincl, zymogen, P exopeptidase, endopeptidase, S53 family, CLN2; HET: NAG; 1.85A {Homo sapiens} PDB: 3ee6_A*
Probab=99.00 E-value=8.1e-10 Score=125.12 Aligned_cols=77 Identities=21% Similarity=0.320 Sum_probs=53.6
Q ss_pred hHHHHHHHHhh--hCCCeEEEEccCCCCCCC---CCCHHHHHHHHHHhcCcEEEEecCCCCCCCC----------cccCC
Q 048642 280 ADILKGFDMAI--HDGVDVISVSLGGDPADY---FNDGTAIGAFHAVKHGIVVVCSAANSGPELG----------TVTNV 344 (782)
Q Consensus 280 ~~i~~ai~~a~--~~g~dVIn~SlG~~~~~~---~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~----------~~~~~ 344 (782)
+.++..+++.. .+-++|||+|||...... +.+.+...+.++..+||.|++|+||+|.... ..+..
T Consensus 283 e~~l~~l~~l~~~~~~~~ViS~S~G~~e~~~~~~y~~~~~~~~~~~~~~Gitv~~ASGD~G~~~~~~~~~~~~~~~~Pas 362 (544)
T 3edy_A 283 EPFLQWLMLLSNESALPHVHTVSYGDDEDSLSSAYIQRVNTELMKAAARGLTLLFASGDSGAGCWSVSGRHQFRPTFPAS 362 (544)
T ss_dssp CHHHHHHHHHTTCSSCCSEEEEECCEEGGGSCHHHHHHHHHHHHHHHHTTCEEEEECCSSTTBCEEETTEEECCCEETTT
T ss_pred ccHHHHHHHHhccCCCCcEEEecCCCcccccCHHHHHHHHHHHHHHHhCCeEEEEecCCCCccccCCCCCccccCCCcCC
Confidence 34555555443 356899999999983221 2233455566788999999999999996431 34456
Q ss_pred CCcEEEEccccC
Q 048642 345 SPWIITVGASTL 356 (782)
Q Consensus 345 ~p~vitVgas~~ 356 (782)
.|||++||+++.
T Consensus 363 ~P~VtaVGgT~l 374 (544)
T 3edy_A 363 SPYVTTVGGTSF 374 (544)
T ss_dssp CTTSEEEEEEEE
T ss_pred CCcEEEEeeeec
Confidence 899999999764
No 38
>2w2n_P Proprotein convertase subtilisin/kexin type 9; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2m_P 2w2o_P 2w2p_P 2w2q_P 2xtj_P
Probab=98.97 E-value=4.6e-10 Score=100.35 Aligned_cols=79 Identities=16% Similarity=0.158 Sum_probs=66.6
Q ss_pred CCCCeEEEEeCCCCCCCCccccccccchhhHHHHHHHhhCCcccccccEeEEeccceeeEEEEcCHHHHHHHhCCCCeEE
Q 048642 28 AIKQSYVVYLGSHAHGPEVTTADLDRVTDSHHEFLGSFLGSTEKARDAIFYSYQNHINGFAATLEEEEAAEIAKHPDVVS 107 (782)
Q Consensus 28 ~~~~~yiV~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~y~~~~ng~s~~~~~~~~~~L~~~p~V~~ 107 (782)
..+++|||+|++.... .....|.+|+.+++.+ .....++.|+|++.|+||+++++++++++|+++|+|.+
T Consensus 35 ~ip~~YIV~lk~~~~~---------~~~~~h~~~l~s~~~~-~~~~~~i~~sY~~~~~GFaa~Lt~~~~~~L~~~P~V~~ 104 (114)
T 2w2n_P 35 RLPGTYVVVLKEETHL---------SQSERTARRLQAQAAR-RGYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDY 104 (114)
T ss_dssp EEEEEEEEEECTTCCH---------HHHHHHHHHHHHHHHH-TTCCCEEEEEECSSSSEEEEECCGGGHHHHHTSTTEEE
T ss_pred CCCCcEEEEECCCCCH---------HHHHHHHHHHHHHhhh-cccCCceEEEecccceEEEEEcCHHHHHHHHcCCCccE
Confidence 4568999999987653 4566889999988654 22456899999999999999999999999999999999
Q ss_pred EEecccccc
Q 048642 108 IFPNKGKKL 116 (782)
Q Consensus 108 V~~~~~~~~ 116 (782)
||+++.++.
T Consensus 105 VE~D~~v~~ 113 (114)
T 2w2n_P 105 IEEDSSVFA 113 (114)
T ss_dssp EEEEEEEEE
T ss_pred EEeCceEec
Confidence 999988754
No 39
>3cnq_P Subtilisin BPN'; uncleaved, proenzyme, substrate complex, hydrolase, metal- binding, protease, secreted, serine protease, sporulation; 1.71A {Bacillus amyloliquefaciens} PDB: 3bgo_P 3co0_P 1spb_P 1scj_B
Probab=98.85 E-value=1e-08 Score=85.62 Aligned_cols=74 Identities=15% Similarity=0.233 Sum_probs=57.2
Q ss_pred CCCCeEEEEeCCCCCCCCccccccccchhhHHHHHHHhhCCcccccccEeEEeccceeeEEEEcCHHHHHHHhCCCCeEE
Q 048642 28 AIKQSYVVYLGSHAHGPEVTTADLDRVTDSHHEFLGSFLGSTEKARDAIFYSYQNHINGFAATLEEEEAAEIAKHPDVVS 107 (782)
Q Consensus 28 ~~~~~yiV~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~y~~~~ng~s~~~~~~~~~~L~~~p~V~~ 107 (782)
..+++|||+||+.... .. .+..+++. ...++.++|.+ |+||+++++++++++|+++|+|.+
T Consensus 6 ~i~~~YIV~~k~~~~~---------~~--~~~~~~~~-------~g~~i~~~y~~-~~Gfaa~l~~~~~~~L~~~p~V~~ 66 (80)
T 3cnq_P 6 NGEKKYIVGFKQGFKS---------CA--KKEDVISE-------KGGKLQKCFKY-VDAASATLNEKAVEELKKDPSVAY 66 (80)
T ss_dssp --CCEEEEEECTTCCS---------HH--HHHHHHHT-------TTCEEEEECSS-SSEEEEECCHHHHHHHHTCTTEEE
T ss_pred cCCCCEEEEECCCCCh---------HH--HHHHHHHH-------cCCcceEEEcc-cEEEEEEcCHHHHHHHHhCCCccE
Confidence 4578999999987764 11 12222221 23579999998 999999999999999999999999
Q ss_pred EEecccccccccc
Q 048642 108 IFPNKGKKLHTTR 120 (782)
Q Consensus 108 V~~~~~~~~~~~~ 120 (782)
||+++.++++++.
T Consensus 67 Ve~D~~v~~~tt~ 79 (80)
T 3cnq_P 67 VEEDKLYRALSAT 79 (80)
T ss_dssp EEECCEEEECCC-
T ss_pred EEeCcEEEEeeec
Confidence 9999999887664
No 40
>3icu_A E3 ubiquitin-protein ligase RNF128; E3 ligase, energy, PA domain, transmembrane,protein turnover conjugation pathway; HET: NAG; 2.10A {Homo sapiens}
Probab=98.79 E-value=2.6e-08 Score=96.62 Aligned_cols=94 Identities=21% Similarity=0.145 Sum_probs=75.8
Q ss_pred cccccCCCCCCCCC-------ccceEEEEeeCC-cchhhhhHHHHHcCceEEEEeccCCCCCccc----cCCCcccEEEE
Q 048642 404 AASLCKNGALDHEK-------VKGKILVCLRGD-TARVDKGRQAAVAGAVGMILCNDKSSGNEIT----ADPHFLPASQI 471 (782)
Q Consensus 404 ~~~~c~~~~~~~~~-------~~gkivl~~~g~-~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~----~~~~~~p~~~i 471 (782)
+...|.+..+.... .+|||+|++||. |+|.+|..+|+++||.++|+||+...+.... .....||+++|
T Consensus 82 ~~~GC~~~~~~~~~~~~~~~~~~gkIaLV~RG~~CsF~~Kv~nAq~aGA~avIIyNn~~~g~~~~~m~~~~~~~IPsv~I 161 (194)
T 3icu_A 82 ALNACNPHTNFTVPTVWGSTVQVSWLALIQRGGGCTFADKIHLAYERGASGAVIFNFPGTRNEVIPMSHPGAVDIVAIMI 161 (194)
T ss_dssp CTTCCSTTCCBCCCBCTTSSCBCCEEEEEESCTTCCHHHHHHHHHHTTCSEEEEECCTTCTTCCCCCCCTTCCSSEEEEE
T ss_pred CcCCCCCCccccCCcccccccCCCeEEEEECCCCcCHHHHHHHHHHCCCcEEEEEeCCCCCCceeeecCCCCCceeEEEE
Confidence 46789987654322 478999999999 9999999999999999999999853332221 12247999999
Q ss_pred ehhhHHHHHHHHhcCCCceEEEecCe
Q 048642 472 TYKDGVKVLDYIKSSDNPMGYITSPS 497 (782)
Q Consensus 472 ~~~~g~~l~~~~~~~~~~~~~i~~~~ 497 (782)
+..+|+.|++++.++...+++|....
T Consensus 162 s~~~G~~L~~~L~~G~~Vtvti~vg~ 187 (194)
T 3icu_A 162 GNLKGTKILQSIQRGIQVTMVIEVGK 187 (194)
T ss_dssp CHHHHHHHHHHHHTTCCEEEEEEEEE
T ss_pred CHHHHHHHHHHHHCCCeEEEEEECCC
Confidence 99999999999999988888887653
No 41
>2qtw_A Proprotein convertase subtilisin/kexin type 9 Pro; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_A 2pmw_A 3h42_A 3bps_P 3gcw_P 3gcx_P 3p5b_P 3p5c_P
Probab=98.69 E-value=1.6e-08 Score=91.43 Aligned_cols=78 Identities=17% Similarity=0.160 Sum_probs=61.1
Q ss_pred CCCeEEEEeCCCCCCCCccccccccchhhHHHHHHHhhCCcccccccEeEEeccceeeEEEEcCHHHHHHHhCCCCeEEE
Q 048642 29 IKQSYVVYLGSHAHGPEVTTADLDRVTDSHHEFLGSFLGSTEKARDAIFYSYQNHINGFAATLEEEEAAEIAKHPDVVSI 108 (782)
Q Consensus 29 ~~~~yiV~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~y~~~~ng~s~~~~~~~~~~L~~~p~V~~V 108 (782)
.+++|||+||+.... .....|.+++..+..+. ....++.|+|++.|+||++++++++++.|+++|+|.+|
T Consensus 46 Ip~~YIV~~K~~~~~---------~~~~~~~~~l~~~~~~r-~~g~~i~~~Y~~~~~GFaa~l~~~~~~~L~~~p~V~~V 115 (124)
T 2qtw_A 46 LPGTYVVVLKEETHL---------SQSERTARRLQAQAARR-GYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYI 115 (124)
T ss_dssp EEEEEEEEECTTCCH---------HHHHHHHHHHHHHHHHT-TCCCEEEEEECSSSCEEEEECCGGGHHHHHTSTTEEEE
T ss_pred CCCCEEEEECCCCCH---------HHHHHHHHHHHHHHhhc-ccCCceEEEecccceEEEEEcCHHHHHHHHcCCCCcEE
Confidence 468999999987763 34455666665543211 12357999999999999999999999999999999999
Q ss_pred Eecccccc
Q 048642 109 FPNKGKKL 116 (782)
Q Consensus 109 ~~~~~~~~ 116 (782)
++++.++.
T Consensus 116 E~D~~v~a 123 (124)
T 2qtw_A 116 EEDSSVFA 123 (124)
T ss_dssp EEEEEEEE
T ss_pred EeCceEec
Confidence 99987754
No 42
>1v5i_B POIA1, IA-1=serine proteinase inhibitor; protease-inhibitor complex, subtilisin, hydrolase-Pro binding complex; 1.50A {Pleurotus ostreatus} SCOP: d.58.3.2 PDB: 1itp_A
Probab=98.58 E-value=1.2e-07 Score=78.17 Aligned_cols=70 Identities=13% Similarity=0.119 Sum_probs=58.3
Q ss_pred CeEEEEeCCCCCCCCccccccccchhhHHHHHHHhhCCcccccccEeEEec-cceeeEEEEcCHHHHHHHhCC--CCeEE
Q 048642 31 QSYVVYLGSHAHGPEVTTADLDRVTDSHHEFLGSFLGSTEKARDAIFYSYQ-NHINGFAATLEEEEAAEIAKH--PDVVS 107 (782)
Q Consensus 31 ~~yiV~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~y~-~~~ng~s~~~~~~~~~~L~~~--p~V~~ 107 (782)
+.|||.||+.... .....|.++++..- ..+.+.|+ ..|+||+++++++.+++|+++ |.|.+
T Consensus 3 ~sYIV~lk~~~~~---------~~~~~~~~~~~~~g-------g~i~~~y~~~~~~Gfa~~~~~~~l~~l~~~~~p~V~~ 66 (76)
T 1v5i_B 3 GKFIVIFKNDVSE---------DKIRETKDEVIAEG-------GTITNEYNMPGMKGFAGELTPQSLTKFQGLQGDLIDS 66 (76)
T ss_dssp EEEEEEECTTCCH---------HHHHHHHHHHHHHT-------CCCCEEEEETTEEEEEEEECHHHHHHHHHTBTTTEEE
T ss_pred ceEEEEECCCCCH---------HHHHHHHHHHHhhC-------CceEEEEEcCceeEEEEEcCHHHHHHHHhcCCCCCcE
Confidence 6899999997763 55666777776652 36889994 799999999999999999999 89999
Q ss_pred EEecccccc
Q 048642 108 IFPNKGKKL 116 (782)
Q Consensus 108 V~~~~~~~~ 116 (782)
||+++.++.
T Consensus 67 VE~D~~v~~ 75 (76)
T 1v5i_B 67 IEEDHVAHA 75 (76)
T ss_dssp EEECCEEEC
T ss_pred EcCCcEEeC
Confidence 999987754
No 43
>2z30_B TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 2z2y_B 3a3p_B 2z56_B 2z58_B 2z57_B 3a3n_B 3a3o_B
Probab=97.28 E-value=0.00042 Score=54.76 Aligned_cols=44 Identities=14% Similarity=0.227 Sum_probs=39.7
Q ss_pred cccccEeEEeccceeeEEEEcCHHHHHHHhCCCCeEEEEeccccc
Q 048642 71 KARDAIFYSYQNHINGFAATLEEEEAAEIAKHPDVVSIFPNKGKK 115 (782)
Q Consensus 71 ~~~~~i~~~y~~~~ng~s~~~~~~~~~~L~~~p~V~~V~~~~~~~ 115 (782)
....++.++|. .+++++++++++.++.|+++|+|.+|++|...+
T Consensus 20 ~~gG~i~~~~~-~I~a~~~~lp~~~~~~L~~~p~V~yVE~D~~v~ 63 (65)
T 2z30_B 20 GIGGHIVYQFK-LIPAVVVDVPANAVGKLKKMPGVEKVEFDHQAV 63 (65)
T ss_dssp GGTCEEEEECS-SSSEEEEEECGGGHHHHHTSTTEEEEEECCEEE
T ss_pred HCCCEEEEEec-CCcEEEEEeCHHHHHHHhcCCCceEEecCcEEE
Confidence 34578999998 899999999999999999999999999998764
No 44
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=96.73 E-value=0.0039 Score=68.81 Aligned_cols=74 Identities=27% Similarity=0.420 Sum_probs=60.2
Q ss_pred CCCCCCCccceEEEEeeCCcchhhhhHHHHHcCceEEEEeccCCCCCc--cc-cCCCcccEEEEehhhHHHHHHHHh
Q 048642 411 GALDHEKVKGKILVCLRGDTARVDKGRQAAVAGAVGMILCNDKSSGNE--IT-ADPHFLPASQITYKDGVKVLDYIK 484 (782)
Q Consensus 411 ~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~--~~-~~~~~~p~~~i~~~~g~~l~~~~~ 484 (782)
.++...+++|||||++||.|.|..|..+|+++||.|+|++++...... +. .....+|++.|+.++++.|.+++.
T Consensus 106 ~D~~~~dv~GkIvlv~~g~~~~~~k~~~A~~~GA~gvIi~~~~~~~~~g~~~~~~~~~IP~~~Is~~~a~~L~~~l~ 182 (421)
T 2ek8_A 106 ADVAGKDLNGKIALIQRGNISFADKVRNAAKQGAKAVIIYNNTDGKLNGTLGGSDASFVAAVGITKQEGDALAANLR 182 (421)
T ss_dssp TTTTTSCCTTSEEEEECCSSCHHHHHHHHHHTTCSEEEEECSSSSCCCCBCSSCCTTCCEEEEECHHHHHHHHHHHH
T ss_pred hhcCCCCcCceEEEEeCCCCCHHHHHHHHHHCCCeEEEEEeCCCcccccccCCCCCCCccEEEeCHHHHHHHHHHhh
Confidence 345556899999999999999999999999999999999998642111 11 134579999999999999999984
No 45
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=96.13 E-value=0.017 Score=63.98 Aligned_cols=82 Identities=17% Similarity=0.153 Sum_probs=61.3
Q ss_pred CCCccceEEEEeeCCcc---------hhhh----hHHHHHcCceEEEEeccCCCCCc--------cccCCCcccEEEEeh
Q 048642 415 HEKVKGKILVCLRGDTA---------RVDK----GRQAAVAGAVGMILCNDKSSGNE--------ITADPHFLPASQITY 473 (782)
Q Consensus 415 ~~~~~gkivl~~~g~~~---------~~~~----~~~~~~~Ga~g~i~~n~~~~~~~--------~~~~~~~~p~~~i~~ 473 (782)
..+++|||||+.|+.|. +..| ..+|.++||.|+|++|+...... .......+|++.|+.
T Consensus 124 ~~dvkGKIVlv~~~~~~~~~~~~y~~~~~kr~~~a~~A~~aGA~avIi~~~~~~~~~~~~tg~~~~~~~~~~IP~~~Is~ 203 (444)
T 3iib_A 124 AGSLNDKIAFIDAKTERHRDGKGYGQTASGRSRGAVAAAEKGAVGIIIRSIGTDHDRMAHTGMMRYEEGVTAIPAAAISN 203 (444)
T ss_dssp TTTTTTCEEEECCCCCCCTTCHHHHHHHHHHHHHHHHHHHTTCSEEEEECSCSCCSSCCCCCBCCCCTTSCCCCEEEECH
T ss_pred ccccCccEEEEeCCCCCCcccccccchhhhhhhHHHHHHHCCCeEEEEEccCCcccccccCCccccCCCCCCCCeEEecH
Confidence 56899999999998884 3344 35799999999999997542211 111235799999999
Q ss_pred hhHHHHHHHHhcCCCceEEEecC
Q 048642 474 KDGVKVLDYIKSSDNPMGYITSP 496 (782)
Q Consensus 474 ~~g~~l~~~~~~~~~~~~~i~~~ 496 (782)
++++.|...+..+...++++...
T Consensus 204 ~da~~L~~~l~~g~~~~v~l~~~ 226 (444)
T 3iib_A 204 PDADLINAMLKRDKEVVISLELG 226 (444)
T ss_dssp HHHHHHHHHHTTTCCCEEEEEEE
T ss_pred HHHHHHHHHHhCCCCeEEEEEEe
Confidence 99999999998876666665543
No 46
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=95.66 E-value=0.017 Score=66.59 Aligned_cols=69 Identities=19% Similarity=0.301 Sum_probs=55.4
Q ss_pred CCccceEEEEeeCCcchhhhhHHHHHcCceEEEEeccCCCC------------------Ccccc----------------
Q 048642 416 EKVKGKILVCLRGDTARVDKGRQAAVAGAVGMILCNDKSSG------------------NEITA---------------- 461 (782)
Q Consensus 416 ~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~------------------~~~~~---------------- 461 (782)
.+++|||||+++|.|.+..|..+|.++||.|+|++++.... +....
T Consensus 128 vdv~GkIvlv~~g~~~~~~K~~~A~~~GA~gvii~~~~~~~~~~~~~~~~~G~~~~~~Gdp~tpg~ps~~~~~~~~~~~~ 207 (640)
T 3kas_A 128 TPVNGSIVIVRAGKITFAEKVANAESLNAIGVLIYMDQTKFPIVNAELSFFGHAHLGTGDPYTPGFPSFNHTQFPPSRSS 207 (640)
T ss_dssp SCCTTSEEEEESCSSCHHHHHHHHHTTTCSEEEEECCTTTCCCSCTTCCCCEECCSSSSCSCCCSSCC---CCCCCCSSC
T ss_pred cccCCcEEEEecCCCCHHHHHHHHHHCCCeEEEEEeccccccccccccccccccccCCCCCCCCCccccccccccccccc
Confidence 58999999999999999999999999999999999975321 00000
Q ss_pred CCCcccEEEEehhhHHHHHHHHh
Q 048642 462 DPHFLPASQITYKDGVKVLDYIK 484 (782)
Q Consensus 462 ~~~~~p~~~i~~~~g~~l~~~~~ 484 (782)
....+|+..|+.++++.|...+.
T Consensus 208 ~~p~IP~~~Is~~~a~~Ll~~l~ 230 (640)
T 3kas_A 208 GLPNIPVQTISRAAAEKLFGNME 230 (640)
T ss_dssp CCCSSCEEECCHHHHHHHHTTEE
T ss_pred CCCCCCEEecCHHHHHHHHHHcc
Confidence 02358999999999999987654
No 47
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=95.58 E-value=0.018 Score=67.14 Aligned_cols=71 Identities=31% Similarity=0.512 Sum_probs=56.6
Q ss_pred CCCccceEEEEeeCCcchhhhhHHHHHcCceEEEEeccCC----------------------C---------CCcccc--
Q 048642 415 HEKVKGKILVCLRGDTARVDKGRQAAVAGAVGMILCNDKS----------------------S---------GNEITA-- 461 (782)
Q Consensus 415 ~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~----------------------~---------~~~~~~-- 461 (782)
..+++|||||+++|.|.+.+|..+|+++||.|+|+|++.. . |+...+
T Consensus 150 ~~~v~GkIvlv~~G~~~~~~Kv~~A~~~GA~gviiy~dp~d~~~~g~~~yP~~~~~p~~~vqrGsv~~~~~~GDp~TPG~ 229 (707)
T 3fed_A 150 GINCTGKIVIARYGKIFRGNKVKNAMLAGAIGIILYSDPADYFAPEVQPYPKGWNLPGTAAQRGNVLNLNGAGDPLTPGY 229 (707)
T ss_dssp CCCCTTCEEEEECCSSCHHHHHHHHHHTTCSEEEEECCHHHHCCTTCCBTTTSSBCCTTCCCCCCCCCCTTCCSTTCTTS
T ss_pred CCCCCCeEEEEECCCCCHhHHHHHHHHCCCEEEEEEcCchhccccccccCCCCccCCCccccccceecccCCCCCCCCCC
Confidence 4589999999999999999999999999999999998621 0 111100
Q ss_pred ---------------CCCcccEEEEehhhHHHHHHHHhc
Q 048642 462 ---------------DPHFLPASQITYKDGVKVLDYIKS 485 (782)
Q Consensus 462 ---------------~~~~~p~~~i~~~~g~~l~~~~~~ 485 (782)
....||+.-|+..+++.|+..+..
T Consensus 230 ps~~~~~r~~~~~~~~~p~IP~~pIS~~da~~Ll~~l~g 268 (707)
T 3fed_A 230 PAKEYTFRLDVEEGVGIPRIPVHPIGYNDAEILLRYLGG 268 (707)
T ss_dssp CCCTTCCCCCGGGCTTCCSSCEEEECHHHHHHHHHTBCB
T ss_pred cccCCCcccChhhccCCCCCCeEecCHHHHHHHHHHhcC
Confidence 014689999999999999987754
No 48
>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.16 E-value=0.047 Score=48.79 Aligned_cols=74 Identities=20% Similarity=0.253 Sum_probs=55.7
Q ss_pred ceEEEEEEEEecCC-CCeEEEEEeCCCCceEEEEecEEEEccCCcEEEEEEEEEecCCCCCCceEEEEEEEE-cCCcEEE
Q 048642 689 GSVTLSRKLKNVGS-PSNYAASVREPLGISVSVEPKILAFKKIGEEKSFKVTLKPKWSGAPDNYRFGELTWT-DGKHYVR 766 (782)
Q Consensus 689 ~~~t~~~tv~n~~~-~~ty~~~~~~~~g~~v~v~p~~~~~~~~~~~~~~~vt~~~~~~~~~~~~~~G~i~~~-~~~~~v~ 766 (782)
.+.+.++.|+|.|. +..|++.... .++++|..-++ ++|++..++|+|.+.. . ..+.+.+.+. ++...+.
T Consensus 41 ~~~~~~~~l~N~g~~~~~f~~~~~~----~F~i~P~~g~L-~pg~~~~i~V~F~P~~---~-g~~~~~l~v~~~~g~~~~ 111 (122)
T 2ys4_A 41 YSTQKILLVRNIGNKNAVFHIKTCR----PFSIEPAIGTL-NVGESMQLEVEFEPQS---V-GDHSGRLIVCYDTGEKVF 111 (122)
T ss_dssp SCEEEEEEEECCSSSCEEEEEECCT----TEEEESSEEEE-CTTCEEEEEEEECCSS---S-BCCCCBCEEEESSSCEEC
T ss_pred CeEEEEEEEEECCCCCEEEEEecCC----CeEEECCcCEE-CCCCEEEEEEEEEcCC---C-ccEEEEEEEEECCCCEEE
Confidence 67888999999999 8888877643 47789999998 7899999999999743 2 3345666654 5556666
Q ss_pred EEEEE
Q 048642 767 SPIVV 771 (782)
Q Consensus 767 ~P~~~ 771 (782)
+++.+
T Consensus 112 v~L~G 116 (122)
T 2ys4_A 112 VSLYG 116 (122)
T ss_dssp CEECC
T ss_pred EEEEE
Confidence 66544
No 49
>3qbt_B Inositol polyphosphate 5-phosphatase OCRL-1; protein transport, vesicular trafficking, GTPase, LOWE syndr immunoglobulin fold, RAB8A, endocytosis; HET: GNP; 2.00A {Homo sapiens}
Probab=90.69 E-value=1.9 Score=39.14 Aligned_cols=84 Identities=12% Similarity=-0.043 Sum_probs=60.0
Q ss_pred ceEEEEEEEEecCC-CCeEEEEEeCC----CCceEEEEecEEEEccCCcEEEEEEEEEecCC----CCCC-ceEEEEEEE
Q 048642 689 GSVTLSRKLKNVGS-PSNYAASVREP----LGISVSVEPKILAFKKIGEEKSFKVTLKPKWS----GAPD-NYRFGELTW 758 (782)
Q Consensus 689 ~~~t~~~tv~n~~~-~~ty~~~~~~~----~g~~v~v~p~~~~~~~~~~~~~~~vt~~~~~~----~~~~-~~~~G~i~~ 758 (782)
...+-+++|+|.|. +.+|++..... ..--++++|..-++ .+|++.++.|++..++. ...+ .-.+--|++
T Consensus 43 ~~~~~~l~I~Ntg~vpa~F~f~~~~~~~~~~~~wl~v~P~~G~L-~Pge~~~I~v~~~v~~~~~~~ln~g~~~l~diLvL 121 (140)
T 3qbt_B 43 QLQKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPFEGYL-EPNETVDISLDVYVSKDSVTILNSGEDKIEDILVL 121 (140)
T ss_dssp CCEEEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEEESCEEEE-CTTCEEEEEEEECBCHHHHHHHHHSSSCSCEEEEE
T ss_pred eeeeeEEEEEcCCccceEEEEecCCCchhhhhHhhhcCCccccc-CCCCeeEEEEEEEEccCcccccccchhhhheeEEE
Confidence 56778889999999 99999985421 12347889999988 78999999999986541 0011 223455665
Q ss_pred -EcCCcEEEEEEEEEE
Q 048642 759 -TDGKHYVRSPIVVNQ 773 (782)
Q Consensus 759 -~~~~~~v~~P~~~~~ 773 (782)
.+++.+..||+.+.+
T Consensus 122 ~Ve~G~d~fI~v~g~~ 137 (140)
T 3qbt_B 122 HLDRGKDYFLTISGNY 137 (140)
T ss_dssp EETTSCEEEEEEEEEE
T ss_pred EeecCCcEEEEEeccc
Confidence 467788999988765
No 50
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=88.45 E-value=0.27 Score=60.45 Aligned_cols=24 Identities=33% Similarity=0.494 Sum_probs=22.4
Q ss_pred CCCCCceEEEEecCCcCcCCCCcc
Q 048642 142 GRFGEDIIIANLDTGVWPESKSFS 165 (782)
Q Consensus 142 ~~~G~gV~VaVIDtGid~~Hp~f~ 165 (782)
.+.|+||+|||+|||||+.+|-|+
T Consensus 32 ~ydGrgv~iai~DtGVDP~a~glq 55 (1354)
T 3lxu_X 32 EYDGRDVTIAIFDSGVDPRATGLE 55 (1354)
T ss_dssp TCSSTTCEEEEEESCCCTTSTTSS
T ss_pred CCCCCccEEEEEeCCCCCCCCcce
Confidence 569999999999999999999995
No 51
>2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=87.52 E-value=1.9 Score=37.29 Aligned_cols=79 Identities=16% Similarity=0.164 Sum_probs=53.1
Q ss_pred ceEEEEEEEEecCC-CCeEEEEEeC-CCCceEEEEecEEEEccCCcEEEEEEEEEecCCCCCCceEEEEEEEE-cC-CcE
Q 048642 689 GSVTLSRKLKNVGS-PSNYAASVRE-PLGISVSVEPKILAFKKIGEEKSFKVTLKPKWSGAPDNYRFGELTWT-DG-KHY 764 (782)
Q Consensus 689 ~~~t~~~tv~n~~~-~~ty~~~~~~-~~g~~v~v~p~~~~~~~~~~~~~~~vt~~~~~~~~~~~~~~G~i~~~-~~-~~~ 764 (782)
...+.+++++|.|+ +..|++.... +.+..++++|..-.+ .+|++++++|++.+.. .+.| .=.|.+. .+ ...
T Consensus 26 ~~~~~~~~l~N~g~~p~~~~~~~~~~~~~~~f~v~p~~g~i-~pg~~~~i~V~f~~~~---~g~f-~~~i~v~~~g~~~~ 100 (112)
T 2e6j_A 26 SAHCYEAILYNKGSIDALFNMTPPTSALGACFVFSPKEGII-EPSGVQAIQISFSSII---LGNF-EEEFLVNVNGSPEP 100 (112)
T ss_dssp CCEEEEEEEEECCSSCEEEEECCCSSHHHHHCEEESSEEEE-CTTBCCEEEEEECCCC---CEEE-EEEECEEESSCSSC
T ss_pred CEEEEEEEEEECCcceEEEEEecCCccccCcEEEECCcCEE-CCCCEEEEEEEEECCC---cceE-EEEEEEEECCCCce
Confidence 46778899999999 9999883311 112357889999888 7899999999999854 2444 3345543 33 344
Q ss_pred EEEEEEEE
Q 048642 765 VRSPIVVN 772 (782)
Q Consensus 765 v~~P~~~~ 772 (782)
+++-+-+.
T Consensus 101 ~~L~i~G~ 108 (112)
T 2e6j_A 101 VKLTIRGC 108 (112)
T ss_dssp CCEEEEEE
T ss_pred EEEEEEEE
Confidence 55555443
No 52
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=85.83 E-value=0.47 Score=52.29 Aligned_cols=30 Identities=27% Similarity=0.331 Sum_probs=26.3
Q ss_pred CCccccccCCCCCCCCCCCcCCeEEeCCceEEEeecCC
Q 048642 505 SPFMASFSSAGPNKITPEILKPDITAPGVNIIAAFTGA 542 (782)
Q Consensus 505 ~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~sa~~~~ 542 (782)
.+.++.||++||.. ||+|||++|+++++.+
T Consensus 183 ~~~~~~~S~~g~~v--------dv~ApG~~i~s~~~~g 212 (441)
T 1y9z_A 183 NLDHAAFSQYTDQV--------EISGPGEAILSTVTVG 212 (441)
T ss_dssp TCCBCTTSCCCTTE--------EEEEECSSEEEECSTT
T ss_pred CCCCCccccCCCce--------EEEeccCCeeccccCC
Confidence 46899999999866 9999999999998753
No 53
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=82.37 E-value=11 Score=32.83 Aligned_cols=53 Identities=17% Similarity=0.140 Sum_probs=42.7
Q ss_pred eEEEEEEEEecCC-CCeEEEEEeCCCCceEEEEecEEEEccCCcEEEEEEEEEecC
Q 048642 690 SVTLSRKLKNVGS-PSNYAASVREPLGISVSVEPKILAFKKIGEEKSFKVTLKPKW 744 (782)
Q Consensus 690 ~~t~~~tv~n~~~-~~ty~~~~~~~~g~~v~v~p~~~~~~~~~~~~~~~vt~~~~~ 744 (782)
.-.++++|.|... +.+|.+++....++++. .+..+++ ++++..++.|.+..+.
T Consensus 32 ~N~Ytlki~Nkt~~~~~~~l~v~g~~~l~~~-g~~~i~v-~~g~~~~~~v~v~~~~ 85 (118)
T 2r39_A 32 ENTYTLKVINKTQQVQEYNLDVKGLNDVSWY-GKQTIQV-EPGEVLNLPMSLGADP 85 (118)
T ss_dssp EEEEEEEEEECSSSCEEEEEEEESCSSCEEE-SCCEEEE-CTTCEEEEEEEEEECG
T ss_pred EEEEEEEEEECCCCCEEEEEEEeCCcccEEe-CCCcEEE-CCCCEEEEEEEEEECh
Confidence 5678899999999 99999999987775553 2556888 7889888888887765
No 54
>3qis_A Inositol polyphosphate 5-phosphatase OCRL-1; DENT disease, RAC1, RAB gtpases, APPL1, endocytic PATH golgi complex, hydrolase-protein binding complex; 2.30A {Homo sapiens} PDB: 2qv2_A
Probab=77.57 E-value=20 Score=37.97 Aligned_cols=92 Identities=11% Similarity=-0.026 Sum_probs=61.1
Q ss_pred cEEeeccC--ceEEEEEEEEecCC-CCeEEEEEeCCC----CceEEEEecEEEEccCCcEEEEEEEEEecCCC----C-C
Q 048642 681 SISVPMIS--GSVTLSRKLKNVGS-PSNYAASVREPL----GISVSVEPKILAFKKIGEEKSFKVTLKPKWSG----A-P 748 (782)
Q Consensus 681 s~~~~~~~--~~~t~~~tv~n~~~-~~ty~~~~~~~~----g~~v~v~p~~~~~~~~~~~~~~~vt~~~~~~~----~-~ 748 (782)
.+.++.+. ...+-+++|+|.|. +.+|.+...... .--++++|..-++ .+|++.+++|++.+++.. . .
T Consensus 36 ~idFg~v~~~~~~~~~l~i~N~g~~pa~f~f~~~~~~~~~~~~wl~v~p~~g~l-~Pge~~~i~l~~~v~~~~~~~ln~g 114 (366)
T 3qis_A 36 EFVFENVKFRQLQKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPFEGYL-EPNETVDISLDVYVSKDSVTILNSG 114 (366)
T ss_dssp EEEEEEECBTCCEEEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEEESCEEEE-CTTCEEEEEEEECBCTTTHHHHHHT
T ss_pred eEEeeeeeeCCeEEEEEEEEecCCceEEEEEEeCCCCCCCCCCcEEEeCCccEE-CCCCEEEEEEEEEECHHHHHHHhcC
Confidence 33344433 57788889999999 999998654322 2238889999988 789999999999876510 0 0
Q ss_pred CceEEEEEEE-EcCCcEEEEEEEEEE
Q 048642 749 DNYRFGELTW-TDGKHYVRSPIVVNQ 773 (782)
Q Consensus 749 ~~~~~G~i~~-~~~~~~v~~P~~~~~ 773 (782)
..-.+--+++ .++++..-+|+-+.+
T Consensus 115 ~~~l~diLvL~ve~G~d~FI~v~~~~ 140 (366)
T 3qis_A 115 EDKIEDILVLHLDRGKDYFLTISGNY 140 (366)
T ss_dssp SSCSCEEEEEEETTSCEEEEEEEEEE
T ss_pred ccccceEEEEEEeCCCcEEEEecccc
Confidence 1223445555 355667777776654
No 55
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=76.18 E-value=14 Score=36.17 Aligned_cols=80 Identities=10% Similarity=0.034 Sum_probs=52.6
Q ss_pred ceEEEEEEEEecCC-CCeEEEEEeCCCCceEEEEecEEEEccCCcEEEEEEEEEecCCCCCCceEEEEEEEE--c--CC-
Q 048642 689 GSVTLSRKLKNVGS-PSNYAASVREPLGISVSVEPKILAFKKIGEEKSFKVTLKPKWSGAPDNYRFGELTWT--D--GK- 762 (782)
Q Consensus 689 ~~~t~~~tv~n~~~-~~ty~~~~~~~~g~~v~v~p~~~~~~~~~~~~~~~vt~~~~~~~~~~~~~~G~i~~~--~--~~- 762 (782)
...+.+++++|.|+ +.+++... .|+.+++...|.. + ++|++.+++|+++... ...-+...+.|.+. + +.
T Consensus 19 ~~~~~~~~i~N~g~~pl~i~~~~-~p~~~~~~~~~~~--I-~PG~~g~I~vt~~~~~-~~~~G~~~~~i~v~~~~~~~~~ 93 (220)
T 2qsv_A 19 DEGVVRLVVNNTDESDLQVAVVS-LPSFVSLDDRAFR--L-QAREPRELNLSLAVPR-NMPPGMKDEPLVLEVTSPETGK 93 (220)
T ss_dssp CCCEEEEEEEECSSSCEEEEEEE-CCTTEECSCCEEE--E-CSSSCEEEEEEECCCT-TCCSEEEEEEEEEEEECTTTCC
T ss_pred CcceEEEEEEeCCCCceEEEecc-CCCceEeeeCcce--e-CCCCceEEEEEEcchh-cccCCceeeEEEEEEEcCCCCc
Confidence 45677889999998 77776542 3655555444444 4 7899999999998765 33334556667664 3 32
Q ss_pred -cEEEEEEEEEE
Q 048642 763 -HYVRSPIVVNQ 773 (782)
Q Consensus 763 -~~v~~P~~~~~ 773 (782)
...++|+.+..
T Consensus 94 ~~~~~i~v~g~v 105 (220)
T 2qsv_A 94 KAVDSVMVSLPL 105 (220)
T ss_dssp EEEEEEEEEEEE
T ss_pred ccccEEEEEEEE
Confidence 24578877753
No 56
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=71.69 E-value=17 Score=32.22 Aligned_cols=51 Identities=18% Similarity=0.160 Sum_probs=36.8
Q ss_pred CceEEEEEEEEecCC--CCeEEEEEeCCCCceEEEEecEEEEccCCcEEEEEEEEEe
Q 048642 688 SGSVTLSRKLKNVGS--PSNYAASVREPLGISVSVEPKILAFKKIGEEKSFKVTLKP 742 (782)
Q Consensus 688 ~~~~t~~~tv~n~~~--~~ty~~~~~~~~g~~v~v~p~~~~~~~~~~~~~~~vt~~~ 742 (782)
+...+++.+|+|.|. ...|++.+-.. |..+.-. .+.+ ++|++++++++..+
T Consensus 32 G~~~ti~vtV~N~G~~~a~~~~V~lyvn-g~~v~t~--~v~L-a~G~s~tv~f~~~~ 84 (127)
T 3idu_A 32 NKLAEYEVHVKNLGGIGVPSTKVRVYIN-GTLYKNW--TVSL-GPKEEKVLTFNWTP 84 (127)
T ss_dssp TCCEEEEEEEEECSSSCEEEEEEEEEET-TEEEEEE--EEEE-CTTCEEEEEEEECC
T ss_pred CCEEEEEEEEEECCCCccCCcEEEEEEC-CEEEeeE--Eecc-CCCCeEEEEEEEEc
Confidence 368999999999998 46788776553 4444322 3455 78999988888875
No 57
>3zyz_A Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.10A {Hypocrea jecorina} PDB: 3zz1_A* 4i8d_A*
Probab=66.70 E-value=10 Score=44.22 Aligned_cols=54 Identities=11% Similarity=0.116 Sum_probs=36.1
Q ss_pred ceEEEEEEEEecCC-C--CeEEEEEeCCCCc------eEEEEecEEEEccCCcEEEEEEEEEecC
Q 048642 689 GSVTLSRKLKNVGS-P--SNYAASVREPLGI------SVSVEPKILAFKKIGEEKSFKVTLKPKW 744 (782)
Q Consensus 689 ~~~t~~~tv~n~~~-~--~ty~~~~~~~~g~------~v~v~p~~~~~~~~~~~~~~~vt~~~~~ 744 (782)
...+++++|+|+|+ . .+-.+.+..|.+. .+.- =+.+.+ ++||+++++++++..+
T Consensus 613 ~~~~vsv~VtNtG~~~G~EVvQlYv~~~~~~~~~P~k~L~g-F~kv~L-~pGes~~V~~~l~~~~ 675 (713)
T 3zyz_A 613 NVATVTVDIANSGQVTGAEVAQLYITYPSSAPRTPPKQLRG-FAKLNL-TPGQSGTATFNIRRRD 675 (713)
T ss_dssp EEEEEEEEEEECSSSCEEEEEEEEEECCTTSSSCCSCEEEE-EEEEEE-CTTCEEEEEEEEEGGG
T ss_pred CeEEEEEEEEeCCCCccceeeeeeeecCCCCCCchhHHhhh-ccccee-CCCCeEEEEEEEcHHH
Confidence 35788999999998 4 4445556655321 1222 233456 7899999999998765
No 58
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A*
Probab=61.97 E-value=12 Score=43.58 Aligned_cols=66 Identities=11% Similarity=0.238 Sum_probs=42.1
Q ss_pred CCCCcEEeecc-----CceEEEEEEEEecCC---CCeEEEEEeCCCCc------eEEEEecEE-EEccCCcEEEEEEEEE
Q 048642 677 FNYPSISVPMI-----SGSVTLSRKLKNVGS---PSNYAASVREPLGI------SVSVEPKIL-AFKKIGEEKSFKVTLK 741 (782)
Q Consensus 677 ~n~ps~~~~~~-----~~~~t~~~tv~n~~~---~~ty~~~~~~~~g~------~v~v~p~~~-~~~~~~~~~~~~vt~~ 741 (782)
|.|..|...++ .+..+++++|||+|+ ..+-.+.+..|.+- .+.- =..+ .+ ++||+++++++++
T Consensus 598 LSYTtF~ys~~~~~~~~~~~~v~v~VtNtG~~~G~eVvQlYv~~~~~~~~~P~k~L~g-F~kv~~L-~pGes~~V~~~l~ 675 (721)
T 2x41_A 598 LSYTTFEYSDLNVSFDGETLRVQYRIENTGGRAGKEVSQVYIKAPKGKIDKPFQELKA-FHKTRLL-NPGESEEVVLEIP 675 (721)
T ss_dssp BCSSCEEEEEEEEEECSSEEEEEEEEEECSSSCBCCEEEEEEECCCSSSCCCSCEEEE-EEECCCB-CTTCEEEEEEEEE
T ss_pred CCcceeEeeceEeecCCCeEEEEEEEEECCCCCCcEEeeEEEccCCCCCCCchHHhhc-ccccccC-CCCCeEEEEEEEC
Confidence 55555554333 256889999999998 45566666665421 1111 1223 34 7899999999998
Q ss_pred ecC
Q 048642 742 PKW 744 (782)
Q Consensus 742 ~~~ 744 (782)
..+
T Consensus 676 ~~~ 678 (721)
T 2x41_A 676 VRD 678 (721)
T ss_dssp GGG
T ss_pred HHH
Confidence 765
No 59
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=59.02 E-value=61 Score=31.40 Aligned_cols=77 Identities=13% Similarity=0.229 Sum_probs=46.3
Q ss_pred ceEEEEEEEEecCC-CCeEEEEEeCCCC-ceEEEEecEEEEccCCcEEEEEEEEEecCCCCCCc-e--EEEEEEE-EcC-
Q 048642 689 GSVTLSRKLKNVGS-PSNYAASVREPLG-ISVSVEPKILAFKKIGEEKSFKVTLKPKWSGAPDN-Y--RFGELTW-TDG- 761 (782)
Q Consensus 689 ~~~t~~~tv~n~~~-~~ty~~~~~~~~g-~~v~v~p~~~~~~~~~~~~~~~vt~~~~~~~~~~~-~--~~G~i~~-~~~- 761 (782)
...+.+.+++|.|+ +...+ .+...-| ..+.. ..-.+ ++|++.++.|++++.. ..+. | ....|.+ +++
T Consensus 134 ~~~~~~f~i~N~G~~pL~I~-~v~~scgct~~~~--~~~~i-~PGe~~~i~v~~~~~~--~~g~~~~~~~~~i~v~~N~~ 207 (220)
T 2qsv_A 134 ETTKAAIEIRNVGAGPLRLH-SVTTRNPALTAVP--DRTEI-KPGGSTLLRIAVDPQV--MKAEGWQSIAADISIICNDP 207 (220)
T ss_dssp SCEEEEEEEEECSSSCEEEE-EEEECSTTEEEEE--SCSEE-CTTCEEEEEEEECHHH--HHHTTCSEEEEEEEEEESCT
T ss_pred CeEEEEEEEEECCCCCEEEE-EEEeCCCCEeeec--CCccC-CCCCEEEEEEEEecCC--CCCcccceeccEEEEEECCC
Confidence 56778899999997 65553 2333333 33333 33344 7899999999998754 2233 1 3456655 343
Q ss_pred -CcEEEEEEEE
Q 048642 762 -KHYVRSPIVV 771 (782)
Q Consensus 762 -~~~v~~P~~~ 771 (782)
.+.+++.+-+
T Consensus 208 ~~p~~~l~i~~ 218 (220)
T 2qsv_A 208 QAPLRRIKVKA 218 (220)
T ss_dssp TCSEEEEEEEE
T ss_pred CCcEEEEEEEE
Confidence 3455766654
No 60
>1m1s_A WR4; structural genomics, major sperm protein, bioinformatics, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=44.62 E-value=92 Score=26.96 Aligned_cols=51 Identities=6% Similarity=0.006 Sum_probs=41.3
Q ss_pred EEEEEEEEecCC-CCeEEEEEeCCCCceEEEEecEEEEccCCcEEEEEEEEEecC
Q 048642 691 VTLSRKLKNVGS-PSNYAASVREPLGISVSVEPKILAFKKIGEEKSFKVTLKPKW 744 (782)
Q Consensus 691 ~t~~~tv~n~~~-~~ty~~~~~~~~g~~v~v~p~~~~~~~~~~~~~~~vt~~~~~ 744 (782)
.+.+++|+|.++ ...|+|.-+.|.- ..|.|..=.+ .+|++.++.|+..+..
T Consensus 25 g~~~l~L~N~t~~~vAFKVKtT~p~~--YrVrP~~G~I-~Pg~~~~I~I~~q~~~ 76 (116)
T 1m1s_A 25 GNSTHNITSESDSRLAFKVKSSNNEH--YRVRPVYGFV-DAKGKSKLDINRLPGP 76 (116)
T ss_dssp EEEEEEEEECSSSEEEEEEEESCTTT--EEEECSEEEE-CTTCEEEEEEEECSCC
T ss_pred CEEEEEEECCCCCeEEEEEEecCCCc--eEEcCCceEE-CCCCeEEEEEEeCCCC
Confidence 467889999998 8899998888764 5667887655 7899999999998753
No 61
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A*
Probab=43.61 E-value=59 Score=38.54 Aligned_cols=66 Identities=14% Similarity=0.257 Sum_probs=42.0
Q ss_pred CCCCCcEEee--cc---CceEEEEEEEEecC-C-CC--eEEEEEeCCCC-----c-eEEEEecEEEEccCCcEEEEEEEE
Q 048642 676 DFNYPSISVP--MI---SGSVTLSRKLKNVG-S-PS--NYAASVREPLG-----I-SVSVEPKILAFKKIGEEKSFKVTL 740 (782)
Q Consensus 676 ~~n~ps~~~~--~~---~~~~t~~~tv~n~~-~-~~--ty~~~~~~~~g-----~-~v~v~p~~~~~~~~~~~~~~~vt~ 740 (782)
-|.|.+|... ++ .+..+++++|+|+| + .. +-.+.+..|.+ + .+.- =..+.+ ++||++++++++
T Consensus 717 GLSYTtF~ys~~~l~v~~~~~~v~v~V~NtG~~~~G~eVvQlYv~~~~~~~~~P~k~L~g-F~kv~L-~pGes~~V~~~l 794 (845)
T 3abz_A 717 GLSYTTFELDISDFKVTDDKIAISVDVKNTGDKFAGSEVVQVYFSALNSKVSRPVKELKG-FEKVHL-EPGEKKTVNIDL 794 (845)
T ss_dssp CBCSSCEEEEEEEEEECSSEEEEEEEEEECCSSCCEEEEEEEEEEESSCSSCCCSCEEEE-EEEEEE-CTTCEEEEEEEE
T ss_pred CCcceeEEEecccccccCCeEEEEEEEEECCcCCCcceeeeeeEeCCCCCcchhhheecc-ceeEEE-CCCCEEEEEEEe
Confidence 4666666665 43 25689999999999 7 43 44445554422 1 1222 223456 789999999999
Q ss_pred E-ec
Q 048642 741 K-PK 743 (782)
Q Consensus 741 ~-~~ 743 (782)
+ ..
T Consensus 795 ~~~~ 798 (845)
T 3abz_A 795 ELKD 798 (845)
T ss_dssp EHHH
T ss_pred CChH
Confidence 8 54
No 62
>1z9l_A Vesicle-associated membrane protein-associated protein A; VAP-A, cytoplasmic domain, protein binding; HET: MSE; 1.70A {Rattus norvegicus} PDB: 1z9o_A 2rr3_A 3ikk_A
Probab=43.16 E-value=64 Score=28.27 Aligned_cols=52 Identities=23% Similarity=0.266 Sum_probs=43.1
Q ss_pred ceEEEEEEEEecCC-CCeEEEEEeCCCCceEEEEecEEEEccCCcEEEEEEEEEec
Q 048642 689 GSVTLSRKLKNVGS-PSNYAASVREPLGISVSVEPKILAFKKIGEEKSFKVTLKPK 743 (782)
Q Consensus 689 ~~~t~~~tv~n~~~-~~ty~~~~~~~~g~~v~v~p~~~~~~~~~~~~~~~vt~~~~ 743 (782)
...+-.++|+|.++ ..-|++..++|. ...|.|..=.+ .++++.++.|++.+.
T Consensus 27 ~~~~~~l~L~N~s~~~vaFKVKTT~p~--~y~VrP~~G~i-~P~~s~~v~V~~~~~ 79 (128)
T 1z9l_A 27 DVVTTNLKLQNPSDRKVCFKVKTTAPR--RYCVRPNSGVI-DPGSIVTVSVMLQPF 79 (128)
T ss_dssp SCEEEEEEEECCSSSCEEEEEEESCGG--GEEEESCEEEE-CTTCEEEEEEEECCC
T ss_pred ceEEEEEEEECCCCCeEEEEEECCCCC--ceEEeCCCcEE-CCCCeEEEEEEECcC
Confidence 45677899999999 899999988886 46677887656 789999999999874
No 63
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=43.13 E-value=1.8e+02 Score=32.56 Aligned_cols=63 Identities=13% Similarity=0.094 Sum_probs=42.9
Q ss_pred CCCcEEeeccCceEEEEEEEEecCC-CCeE-EEEEeCCCCceEEEEecEEEEccCCcEEEEEEEEEecC
Q 048642 678 NYPSISVPMISGSVTLSRKLKNVGS-PSNY-AASVREPLGISVSVEPKILAFKKIGEEKSFKVTLKPKW 744 (782)
Q Consensus 678 n~ps~~~~~~~~~~t~~~tv~n~~~-~~ty-~~~~~~~~g~~v~v~p~~~~~~~~~~~~~~~vt~~~~~ 744 (782)
..|.+++..- ++.+++++|+|-+. ...- ++++..+.+.+++. ....+ ++|++.++.++|+.+.
T Consensus 363 ~~~~~~~~~g-~~~~~~~~vtn~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~g~~~t~~~~vt~~~ 427 (601)
T 1w8o_A 363 TIPDVALEPG-QQVTVPVAVTNQSGIAVPKPSLQLDASPDWQVQG--SVEPL-MPGRQAKGQVTITVPA 427 (601)
T ss_dssp ECCCEEECTT-CEEEEEEEEECCSSSCBSSCEEEEECCTTSEEEE--EECCB-CTTCEEEEEEEEECCT
T ss_pred cCccceecCC-ceeEEEEEEECCCceeccCceEEEecCCCcEEec--ccccc-CCCCceEEEEEEecCC
Confidence 3466666643 68889999999764 3222 44566688888776 33444 6789999988888765
No 64
>1msp_A MSP, major sperm protein; cytoskeletal protein, cell motility protein; 2.50A {Ascaris suum} SCOP: b.1.11.2 PDB: 3msp_A 2bvu_A 2msp_A 1grw_A
Probab=40.96 E-value=72 Score=27.96 Aligned_cols=51 Identities=20% Similarity=0.178 Sum_probs=42.1
Q ss_pred eEEEEEEEEecCC-CCeEEEEEeCCCCceEEEEecEEEEccCCcEEEEEEEEEec
Q 048642 690 SVTLSRKLKNVGS-PSNYAASVREPLGISVSVEPKILAFKKIGEEKSFKVTLKPK 743 (782)
Q Consensus 690 ~~t~~~tv~n~~~-~~ty~~~~~~~~g~~v~v~p~~~~~~~~~~~~~~~vt~~~~ 743 (782)
..+-.++|+|.++ ..-|.+..++|.- ..|.|..=.+ .++++..+.|++.+.
T Consensus 26 ~~~~~l~l~N~s~~~vaFKVKTT~p~~--y~VrP~~Gii-~P~~s~~v~V~~q~~ 77 (126)
T 1msp_A 26 KHTYHIKITNAGGRRIGWAIKTTNMRR--LSVDPPCGVL-DPKEKVLMAVSCDTF 77 (126)
T ss_dssp CCCEEEEEEECSSSCEEEEEEESCTTT--EEEESCEEEE-CTTCEEEEEEEECCC
T ss_pred ceEEEEEEECCCCCeEEEEEEcCCCCc--EEEECCCeEE-CCCCEEEEEEEecCC
Confidence 4566788999999 8999999988875 5667887666 789999999999874
No 65
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=40.10 E-value=1.6e+02 Score=25.61 Aligned_cols=68 Identities=16% Similarity=0.142 Sum_probs=42.0
Q ss_pred CceEEEEEEEEecCC-C--------CeEEEEEeCCCCceEE---------EEecEEEEccCCcEEEEEEEEEecCCCCCC
Q 048642 688 SGSVTLSRKLKNVGS-P--------SNYAASVREPLGISVS---------VEPKILAFKKIGEEKSFKVTLKPKWSGAPD 749 (782)
Q Consensus 688 ~~~~t~~~tv~n~~~-~--------~ty~~~~~~~~g~~v~---------v~p~~~~~~~~~~~~~~~vt~~~~~~~~~~ 749 (782)
++...++++|+|.++ . ..|.+.+....|-.|. --....++ ++||+.+|+++.+. . ...+
T Consensus 17 g~~v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl-~pGE~~~f~~~w~~-~-~~pG 93 (120)
T 3isy_A 17 PEQIKFNMSLKNQSERAIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTL-ESGETYDFSDVWKE-V-PEPG 93 (120)
T ss_dssp SSCEEEEEEEEECSSSCEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEE-CTTCEEEEEEEESS-C-CCSE
T ss_pred CCeEEEEEEEEcCCCCcEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEE-CCCCEEEEEEEeCC-C-CCCc
Confidence 367889999999885 3 3455555554454433 11234566 78999999999983 1 2344
Q ss_pred ce-EEEEEEE
Q 048642 750 NY-RFGELTW 758 (782)
Q Consensus 750 ~~-~~G~i~~ 758 (782)
.| +.+.+.-
T Consensus 94 ~Ytl~a~l~~ 103 (120)
T 3isy_A 94 TYEVKVTFKG 103 (120)
T ss_dssp EEEEEEEECC
T ss_pred cEEEEEEEEe
Confidence 44 4555443
No 66
>1row_A SSP-19, MSP-domain protein like family member; beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=39.11 E-value=1e+02 Score=26.20 Aligned_cols=50 Identities=14% Similarity=0.073 Sum_probs=40.8
Q ss_pred EEEEEEEecCC-CCeEEEEEeCCCCceEEEEecEEEEccCCcEEEEEEEEEecC
Q 048642 692 TLSRKLKNVGS-PSNYAASVREPLGISVSVEPKILAFKKIGEEKSFKVTLKPKW 744 (782)
Q Consensus 692 t~~~tv~n~~~-~~ty~~~~~~~~g~~v~v~p~~~~~~~~~~~~~~~vt~~~~~ 744 (782)
+-+++|+|.++ ...|++.-+.|.- ..|.|..=.+ .+|++.++.|+..+..
T Consensus 18 ~~~l~L~N~t~~~vaFKVKtT~p~~--y~VrP~~G~I-~P~~~~~i~I~~q~~~ 68 (109)
T 1row_A 18 SSTHKLVNGGAEKIVFKIKSSNNNE--YRIAPVFGFV-DPSGSKDVVITRTAGA 68 (109)
T ss_dssp EEEEEEEECSSSCEEEEEEESCSSS--EEEECSEEEE-CTTEEEEEEEEECSCC
T ss_pred eEEEEEEcCCCCeEEEEEEeCCCCc--eEEcCCceEE-CCCCeEEEEEEeCCCC
Confidence 46788999998 8999999888764 6667887656 7899999999998743
No 67
>1wic_A Hypothetical protein riken cDNA 6030424E15; beta sandwich fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.11.2
Probab=38.27 E-value=68 Score=29.18 Aligned_cols=51 Identities=16% Similarity=0.097 Sum_probs=42.2
Q ss_pred eEEEEEEEEecCC-CCeEEEEEeCCCCceEEEEecEEEEccCCcEEEEEEEEEec
Q 048642 690 SVTLSRKLKNVGS-PSNYAASVREPLGISVSVEPKILAFKKIGEEKSFKVTLKPK 743 (782)
Q Consensus 690 ~~t~~~tv~n~~~-~~ty~~~~~~~~g~~v~v~p~~~~~~~~~~~~~~~vt~~~~ 743 (782)
..+-.++|+|.++ ..-|++.-++|.- ..|.|..=.+ .++++.++.|++.+.
T Consensus 36 ~~~~~l~L~N~s~~~VaFKVKTT~p~~--y~VrP~~GiI-~P~~s~~V~V~lq~~ 87 (152)
T 1wic_A 36 EKKTLIVLTNVTKNIVAFKVRTTAPEK--YRVKPSNSSC-DPGASIDIIVSPHGG 87 (152)
T ss_dssp CCCEEEEEEBCSSSCEEEEEEESCTTT--EEEESSEEEE-CTTCEEEEEEEECSS
T ss_pred eEEEEEEEEcCCCCeEEEEEECCCCCc--eeecCCCcEE-CCCCeEEEEEEecCc
Confidence 4466899999999 8999999888864 6667888666 789999999999774
No 68
>1wgl_A TOLL-interacting protein; CUE domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, immune system; NMR {Homo sapiens} SCOP: a.5.2.4
Probab=33.61 E-value=27 Score=26.37 Aligned_cols=32 Identities=16% Similarity=0.199 Sum_probs=25.5
Q ss_pred hhhHHHHHHHHHHhhCCCCCHHHHHHHHHhcc
Q 048642 566 SCPHVAGVVGLLKTAHPDWSPSAIRSAIMTTA 597 (782)
Q Consensus 566 AaP~VAG~aALl~q~~p~~sp~~ik~~L~~TA 597 (782)
..|..--....|++.+|+++...|+..|...=
T Consensus 5 ~~~~~ee~l~~L~emFP~ld~~~I~~vL~a~~ 36 (59)
T 1wgl_A 5 SSGCSEEDLKAIQDMFPNMDQEVIRSVLEAQR 36 (59)
T ss_dssp SSSSCHHHHHHHHHHCSSSCHHHHHHHHTTTT
T ss_pred CCCCCHHHHHHHHHHCCCCCHHHHHHHHHHcC
Confidence 33444456788999999999999999998873
No 69
>2cri_A Vesicle-associated membrane protein-associated protein A; VAP-A, VAP-33, beta sandwitch fold, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=32.99 E-value=78 Score=28.55 Aligned_cols=52 Identities=23% Similarity=0.255 Sum_probs=42.4
Q ss_pred ceEEEEEEEEecCC-CCeEEEEEeCCCCceEEEEecEEEEccCCcEEEEEEEEEec
Q 048642 689 GSVTLSRKLKNVGS-PSNYAASVREPLGISVSVEPKILAFKKIGEEKSFKVTLKPK 743 (782)
Q Consensus 689 ~~~t~~~tv~n~~~-~~ty~~~~~~~~g~~v~v~p~~~~~~~~~~~~~~~vt~~~~ 743 (782)
...+-.++|+|.++ ..-|++.-++|.- ..|.|..=.+ .++++.++.|++.+.
T Consensus 31 ~~~~~~l~L~N~s~~~VaFKVKTT~p~~--y~VrP~~GiI-~P~~s~~v~V~l~~~ 83 (147)
T 2cri_A 31 DVVTTNLKLQNPSDRKVCFKVKTTAPRR--YCVRPNSGII-DPGSIVTVSVMLQPF 83 (147)
T ss_dssp SCCCEEEEEECCSSSCEEEEEEESCTTS--EEEESSEEEC-CTTCEEEEEEEECCC
T ss_pred ceEEEEEEEECCCCCcEEEEEECCCCcc--EEEcCCCcEE-CCCCeEEEEEEECCC
Confidence 34566789999999 8999999988874 5667887555 889999999999874
No 70
>2l0d_A Cell surface protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Methanosarcina acetivorans}
Probab=32.70 E-value=1.4e+02 Score=25.60 Aligned_cols=24 Identities=17% Similarity=0.365 Sum_probs=18.3
Q ss_pred CceEEEEEEEEecCC--CCeEEEEEe
Q 048642 688 SGSVTLSRKLKNVGS--PSNYAASVR 711 (782)
Q Consensus 688 ~~~~t~~~tv~n~~~--~~ty~~~~~ 711 (782)
+...+++.+|+|.|. ...+++.+.
T Consensus 18 ~~~~ti~atVkN~G~~~a~~~~V~ly 43 (114)
T 2l0d_A 18 NTVNTMTATIENQGNKDSTSFNVSLL 43 (114)
T ss_dssp TSEEEEEEEEEECSSSCBCCEEEEEE
T ss_pred CCeEEEEEEEEECCCCCCCCEEEEEE
Confidence 368999999999997 455666654
No 71
>2kq1_A BH0266 protein; solution NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; NMR {Bacillus halodurans}
Probab=28.57 E-value=13 Score=32.41 Aligned_cols=50 Identities=22% Similarity=0.276 Sum_probs=30.9
Q ss_pred EEEEEecCC-CCeEEEEEe-CCCCceEEEEecEEEEc-cCCcEEEEEEEEEec
Q 048642 694 SRKLKNVGS-PSNYAASVR-EPLGISVSVEPKILAFK-KIGEEKSFKVTLKPK 743 (782)
Q Consensus 694 ~~tv~n~~~-~~ty~~~~~-~~~g~~v~v~p~~~~~~-~~~~~~~~~vt~~~~ 743 (782)
.+-|++++. ..+..+.+. .|.|++++++|..+++. ....+++|.|++...
T Consensus 58 ~vDLs~l~~G~~~vpv~v~~lp~~v~v~v~P~~V~V~i~~~~~k~~pV~v~~~ 110 (119)
T 2kq1_A 58 FVDLTEAGEGSHTVDVEHRGFPGDLAVTVEPRMARVQLEERQTVSVPVTVEMI 110 (119)
T ss_dssp EEECTTCCBEEEEEECEEESSCTTSEEEESCCEEEEEEESCCCCCCCCCCCCC
T ss_pred EEECccCCCCeEEEEEEEecCCCCeEEEEcCCEEEEEEEEEEEEEEEEEEEEC
Confidence 334445543 233334455 67899999999887775 344567777777654
No 72
>3sd2_A Putative member of DUF3244 protein family; immunoglobulin-like beta-sandwich, structural genomics, JOIN for structural genomics; HET: MSE; 1.40A {Bacteroides thetaiotaomicron}
Probab=26.41 E-value=2.4e+02 Score=23.64 Aligned_cols=64 Identities=9% Similarity=0.018 Sum_probs=41.7
Q ss_pred cEEeeccCceEEEEEEEEecCC-CCeEEEEEeCCCCceEEEEecEEEEccCCcEEEEEEEEEecCCCCCCceEEEEEE
Q 048642 681 SISVPMISGSVTLSRKLKNVGS-PSNYAASVREPLGISVSVEPKILAFKKIGEEKSFKVTLKPKWSGAPDNYRFGELT 757 (782)
Q Consensus 681 s~~~~~~~~~~t~~~tv~n~~~-~~ty~~~~~~~~g~~v~v~p~~~~~~~~~~~~~~~vt~~~~~~~~~~~~~~G~i~ 757 (782)
.+++........++++|+|... ...|.-....|. .+++ .+ ...++..|+|.+.... .++.|...
T Consensus 35 vlsV~F~~~~~~vTItItNe~TG~~VYs~~~s~p~--~i~I-----dL-nge~sG~Y~IeI~~~~-----~~LtG~F~ 99 (101)
T 3sd2_A 35 ILNVSFGRAKDYAIITVTNKATGEIVHSKTYHNTS--IVMI-----DM-SSCEKGEYTIHIILND-----CLLEGTFT 99 (101)
T ss_dssp EEEEEESSCCSCEEEEEEETTTCCEEEEEEESSCS--EEEE-----EC-TTSCSEEEEEEEEETT-----EEEEEEEE
T ss_pred EEEEEeccCCCcEEEEEEECCCCcEEEEEeccCCc--EEEE-----Ec-CCCcCceEEEEEEeCC-----cEEEEEEE
Confidence 5555555567788999999865 788877666543 2222 22 3344778999987644 66777654
No 73
>3e9t_A Na/Ca exchange protein; CBD1, CALX, membrane, transmembrane, membrane protein; 1.60A {Drosophila melanogaster} SCOP: b.1.27.0
Probab=24.70 E-value=3.1e+02 Score=23.18 Aligned_cols=62 Identities=15% Similarity=0.191 Sum_probs=32.7
Q ss_pred CcEEeeccCceEEEEEEEEecCC-CCeEEEEEe-----CCCCceEEEEecEEEEccCCc-EEEEEEEEEecC
Q 048642 680 PSISVPMISGSVTLSRKLKNVGS-PSNYAASVR-----EPLGISVSVEPKILAFKKIGE-EKSFKVTLKPKW 744 (782)
Q Consensus 680 ps~~~~~~~~~~t~~~tv~n~~~-~~ty~~~~~-----~~~g~~v~v~p~~~~~~~~~~-~~~~~vt~~~~~ 744 (782)
+++.+.+..+..+++++.+ |+ ..+-++.+. +..|.+......+|+| ++|| +++|+|.+.-+.
T Consensus 10 ~~y~V~E~~g~~~v~V~R~--g~~~~~v~V~y~t~~gTA~~g~Dy~~~~g~l~F-~~Get~k~i~V~I~dD~ 78 (114)
T 3e9t_A 10 GHYTVMENCGEFEVRVVRR--GDISTYASVEYETQDGTASAGTDFVGRKGLLSF-PPGVDEQRFRIEVIDDD 78 (114)
T ss_dssp SEEEEETTCCEEEEEEEEE--ECCSSCEEEEEEEECSSSCBTTTBCCCEEEEEE-CTTCCEEEEEEEBCCCS
T ss_pred CEEEEEcCCeEEEEEEEEE--CCCCeeEEEEEEeECCccCCCCCceEcceEEEE-eCCcEEEEEEEEEEcCC
Confidence 4555655434444444333 33 333333332 3345555555678999 5565 567777665433
No 74
>1ni7_A ER75, hypothetical protein YGDK; RD-structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Escherichia coli} SCOP: d.224.1.1
Probab=23.06 E-value=59 Score=29.77 Aligned_cols=33 Identities=21% Similarity=0.252 Sum_probs=27.4
Q ss_pred eeccccchhhHHHHHHHHHHhhCCCCCHHHHHHH
Q 048642 559 IMSGTSMSCPHVAGVVGLLKTAHPDWSPSAIRSA 592 (782)
Q Consensus 559 ~~sGTSmAaP~VAG~aALl~q~~p~~sp~~ik~~ 592 (782)
.+.|-| =|++|-|.+|||.+.+-..+|++|.+.
T Consensus 78 ~F~adS-DA~IvkGL~AlL~~~~~G~tp~eIl~~ 110 (155)
T 1ni7_A 78 HFFGDS-EGRIVRGLLAVLLTAVEGKTAAELQAQ 110 (155)
T ss_dssp CCEEEE-SSHHHHHHHHHHHHHTTTCCHHHHHHS
T ss_pred EEeeCC-ccHHHHHHHHHHHHHHcCCCHHHHHhC
Confidence 344555 479999999999999999999998653
No 75
>2qvk_A CBD2, sodium/calcium exchanger 1; calcium binding domain, metal binding protein; 1.45A {Canis lupus familiaris} PDB: 2qvm_A 2fwu_A 2kls_A
Probab=21.56 E-value=2.4e+02 Score=26.69 Aligned_cols=62 Identities=18% Similarity=0.127 Sum_probs=35.2
Q ss_pred CcEEeeccCceEEEEEEEEecCC-CCeEEEEEe-----CCC-CceEEEEecEEEEccCCcE-EEEEEEEEecC
Q 048642 680 PSISVPMISGSVTLSRKLKNVGS-PSNYAASVR-----EPL-GISVSVEPKILAFKKIGEE-KSFKVTLKPKW 744 (782)
Q Consensus 680 ps~~~~~~~~~~t~~~tv~n~~~-~~ty~~~~~-----~~~-g~~v~v~p~~~~~~~~~~~-~~~~vt~~~~~ 744 (782)
+++.+....+ +++++|+-.++ ..+.+|... +.. |.+.....-+|+| .+|++ ++|+|.+.-+.
T Consensus 13 ~~y~V~E~~G--~v~vtV~R~gg~~g~VsV~y~T~dGTA~agG~DY~~~sGtL~F-~~GEt~KtI~I~IidD~ 82 (192)
T 2qvk_A 13 PVTHVSESIG--IMEVKVLRTSGARGNVIVPYKTIEGTARGGGEDFEDTCGELEF-QNDEIVKTISVKVIDDE 82 (192)
T ss_dssp SEEEEETTCC--EEEEEEEEESCCCSCEEEEEEEEESSSCTTTTSBCCCEEEEEE-CTTCCEEEEEEEBCCCS
T ss_pred CeEEEEcCce--EEEEEEEEeCCCCceEEEEEEeeCCceeccCcCccccceEEEE-CCCCeEEEEEEEEeCCC
Confidence 4556655334 45555555554 444444332 444 5666666678999 56764 67777765443
No 76
>3hrz_B Cobra venom factor; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Naja kaouthia} PDB: 3frp_G* 3hs0_B*
Probab=21.15 E-value=2.7e+02 Score=27.35 Aligned_cols=65 Identities=12% Similarity=0.095 Sum_probs=40.4
Q ss_pred CCCCCcEEeeccCceEEEEEEEEecCC-CCeEEEEEeCCCCceEEE-----EecEEEEccCCcEEEEEEEEEec
Q 048642 676 DFNYPSISVPMISGSVTLSRKLKNVGS-PSNYAASVREPLGISVSV-----EPKILAFKKIGEEKSFKVTLKPK 743 (782)
Q Consensus 676 ~~n~ps~~~~~~~~~~t~~~tv~n~~~-~~ty~~~~~~~~g~~v~v-----~p~~~~~~~~~~~~~~~vt~~~~ 743 (782)
++|.|..... +....+..+|.|..+ ..+.++.+....++.... ...++.+ ++++++++...+.+.
T Consensus 85 ~~~LP~sv~r--GE~~~l~~~V~Ny~~~~~~v~V~l~~~~~~~~~~~~~~~~~~~v~v-~a~~~~~v~f~i~p~ 155 (252)
T 3hrz_B 85 DLQMPYSVVK--NEQVEIRAILHNYVNEDIYVRVELLYNPAFCSASTKGQRYRQQFPI-KALSSRAVPFVIVPL 155 (252)
T ss_dssp EECCCSCEET--TCCEEEEEEEEECSSSCEEEEEEECCCTTEEESCCSSCCEEEEEEE-CTTEEEEEEEEEEEC
T ss_pred EcCCCcEEee--CCEEEEEEEEEcccCceEEEEEEEEcCCceEeecCCCCceEEEEEE-CCCCeEEEEEEEEec
Confidence 4677766543 257888899999887 667777766554433221 1233556 566777777666653
No 77
>2kut_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Geobacter metallireducens}
Probab=20.63 E-value=65 Score=28.18 Aligned_cols=54 Identities=22% Similarity=0.391 Sum_probs=31.8
Q ss_pred ceEEEEEEEEecCC--CCeEEEEE--eCCC--CceEEEEecEEEEccCCcEEEEEEEEEecC
Q 048642 689 GSVTLSRKLKNVGS--PSNYAASV--REPL--GISVSVEPKILAFKKIGEEKSFKVTLKPKW 744 (782)
Q Consensus 689 ~~~t~~~tv~n~~~--~~ty~~~~--~~~~--g~~v~v~p~~~~~~~~~~~~~~~vt~~~~~ 744 (782)
...+|+.+|+|.|. ..-+.+.+ ..|. |..+...+ .-.+ ++|++.+++|++....
T Consensus 16 ~~vTvsatVkN~Gt~~s~a~~V~~yl~~p~~gg~~vgt~t-v~~L-aaG~s~t~~v~~~~~~ 75 (122)
T 2kut_A 16 EEITVSARVTNRGAAEAHNVPVAVYLGNPAQGGVEIGRDT-ISRI-PVGGTGLARVQWKATR 75 (122)
T ss_dssp CEEEEEEEEECCSSSCBCCCCEEECSSCTTTCCCCCBCCC-CSCB-CTTCEEECCEEEECCC
T ss_pred CeEEEEEEEEeCCCcccCcEEEEEEeCCCccCCeEEeeEE-cccc-CCCCeEEEEEEEecCC
Confidence 68999999999997 33344443 3321 22222211 0112 7899999777777653
No 78
>3fso_A Integrin beta-4, GP150; immunoglobulin fold, cell adhesion, alternative splicing, disease mutation, epidermolysis bullosa, glycoprotein, membrane; 1.41A {Homo sapiens} SCOP: b.1.27.0 PDB: 3fq4_A 3h6a_A
Probab=20.44 E-value=1.8e+02 Score=25.15 Aligned_cols=61 Identities=18% Similarity=0.016 Sum_probs=33.0
Q ss_pred CCcEEeeccCceEEEEEEEEecCC-CCeEEEEE-----eCCCCceEEEEecEEEEccCCc-EEEEEEEEEe
Q 048642 679 YPSISVPMISGSVTLSRKLKNVGS-PSNYAASV-----REPLGISVSVEPKILAFKKIGE-EKSFKVTLKP 742 (782)
Q Consensus 679 ~ps~~~~~~~~~~t~~~tv~n~~~-~~ty~~~~-----~~~~g~~v~v~p~~~~~~~~~~-~~~~~vt~~~ 742 (782)
.+++.+.+..+ +++++|...+. ..+.++.. ++..|.+.....-+|+| ++|| +++|+|.+.-
T Consensus 12 ~~~y~V~E~~g--~~~v~V~R~gg~~g~v~V~y~T~dgTA~ag~Dy~~~~g~l~F-~~Get~k~i~V~I~d 79 (123)
T 3fso_A 12 QPEFSVSRGDQ--VARIPVIRRVLDGGKSQVSYRTQDGTAQGNRDYIPVEGELLF-QPGEAWKELQVKLLE 79 (123)
T ss_dssp CSEEEEEGGGS--EEEEEEEEESCCSSCEEEEEEEEESSSCBTTTBCCCEEEEEE-CTTCCEEEEEEEBCC
T ss_pred CCEEEEEcCce--EEEEEEEEeCCCCceEEEEEEeeCCcEeCCccccccceEEEE-CCCCeEEEEEEEEEC
Confidence 34566655333 44555554444 33333332 24445566556778999 5666 4666666643
No 79
>3q48_A Chaperone CUPB2; IG fold, periplasmic chaperone; 2.50A {Pseudomonas aeruginosa}
Probab=20.15 E-value=5.3e+02 Score=25.40 Aligned_cols=83 Identities=12% Similarity=0.135 Sum_probs=51.3
Q ss_pred ceEEEEEEEEecCCCCeEEEE--EeCCC--------CceEEEEecEEEEccCCcEEEEEEEEEecCCCCCCce-EEEEEE
Q 048642 689 GSVTLSRKLKNVGSPSNYAAS--VREPL--------GISVSVEPKILAFKKIGEEKSFKVTLKPKWSGAPDNY-RFGELT 757 (782)
Q Consensus 689 ~~~t~~~tv~n~~~~~ty~~~--~~~~~--------g~~v~v~p~~~~~~~~~~~~~~~vt~~~~~~~~~~~~-~~G~i~ 757 (782)
+....+++|+|.++ ..|.+. ++... ...+.++|..+.+ ++++++++.|...... .+.+.. +| +|.
T Consensus 42 ~~k~~sl~l~N~~~-~P~LvQsWid~~~~~~~p~~~~~pfivtPPl~rl-~pg~~q~lRI~~~~~~-LP~DrESlf-~ln 117 (257)
T 3q48_A 42 SEREVTLRVSNTSG-TPVLAQAWIDDGRQDVPPEELQVPFSVTPAVTRV-EPNGGAVLRIAYLKAP-LPTDRESLF-WLN 117 (257)
T ss_dssp TCSEEEEEEEECSS-SCEEEEEEEESSCCSSCGGGGCCSEEEESSEEEE-CTTEEEEEEEEECCCC-CCSSSCEEE-EEE
T ss_pred CCcEEEEEEEeCCC-CeEEEEEEEEcCCCccCcccccCCEEEcCCEEEE-CCCCceEEEEEECCCC-CCCCceeEE-EEE
Confidence 45678889999875 345443 33211 2458999999999 7899999999876543 444432 11 122
Q ss_pred EEc--------C-----CcEEEEEEEEEEcc
Q 048642 758 WTD--------G-----KHYVRSPIVVNQAQ 775 (782)
Q Consensus 758 ~~~--------~-----~~~v~~P~~~~~~~ 775 (782)
+.+ . .-.-|||+.+++..
T Consensus 118 v~eIPp~~~~~~n~Lqiair~rIKLFyRP~~ 148 (257)
T 3q48_A 118 ILEVPPRDEDENNALQFSFRSRFKLFFRPSQ 148 (257)
T ss_dssp EEEECCC---------CCEEEEEEEEEECTT
T ss_pred eeecCCCCCCCCceEEEEEEEEEEEEEeccc
Confidence 211 1 12457999888764
Done!