Query 048643
Match_columns 506
No_of_seqs 292 out of 3029
Neff 8.8
Searched_HMMs 46136
Date Fri Mar 29 11:33:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048643.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/048643hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02590 probable tyrosine dec 100.0 4.4E-97 1E-101 772.5 54.9 477 16-501 50-536 (539)
2 PLN02880 tyrosine decarboxylas 100.0 3E-91 6.6E-96 729.7 53.7 476 17-501 7-488 (490)
3 KOG0628 Aromatic-L-amino-acid/ 100.0 4.5E-90 9.7E-95 670.0 40.2 457 20-499 1-473 (511)
4 TIGR03799 NOD_PanD_pyr putativ 100.0 2.2E-74 4.8E-79 603.3 47.3 456 23-491 22-519 (522)
5 PF00282 Pyridoxal_deC: Pyrido 100.0 4.5E-75 9.7E-80 589.1 30.0 364 54-422 1-373 (373)
6 KOG0629 Glutamate decarboxylas 100.0 2.2E-74 4.9E-79 554.1 32.2 486 2-497 3-509 (510)
7 TIGR03811 tyr_de_CO2_Ent tyros 100.0 2.4E-69 5.1E-74 568.8 50.5 456 18-498 12-603 (608)
8 COG0076 GadB Glutamate decarbo 100.0 1.6E-59 3.6E-64 482.8 38.4 435 36-498 4-450 (460)
9 PLN02263 serine decarboxylase 100.0 1.3E-58 2.8E-63 471.4 37.7 353 72-498 75-444 (470)
10 TIGR01788 Glu-decarb-GAD gluta 100.0 2.2E-56 4.9E-61 458.9 38.2 392 63-498 15-430 (431)
11 PLN03032 serine decarboxylase; 100.0 4.2E-50 9E-55 404.2 35.1 351 72-494 8-373 (374)
12 PRK02769 histidine decarboxyla 100.0 3.3E-48 7.2E-53 393.4 36.7 349 73-496 8-371 (380)
13 cd06450 DOPA_deC_like DOPA dec 100.0 1.5E-43 3.2E-48 359.0 34.8 334 95-493 1-344 (345)
14 PRK13520 L-tyrosine decarboxyl 100.0 3.4E-34 7.4E-39 293.4 34.2 361 70-496 2-370 (371)
15 KOG1383 Glutamate decarboxylas 100.0 1.2E-34 2.6E-39 284.0 28.7 387 63-503 54-452 (491)
16 TIGR03812 tyr_de_CO2_Arch tyro 100.0 2.7E-33 5.8E-38 287.0 34.9 361 71-493 1-372 (373)
17 TIGR00461 gcvP glycine dehydro 100.0 1.4E-31 3.1E-36 291.1 37.7 379 70-500 466-870 (939)
18 PRK04366 glycine dehydrogenase 100.0 3.6E-31 7.8E-36 278.2 35.5 399 53-503 34-454 (481)
19 PRK05367 glycine dehydrogenase 100.0 3.4E-31 7.4E-36 293.3 34.8 379 70-500 478-878 (954)
20 COG1104 NifS Cysteine sulfinat 100.0 1.2E-30 2.6E-35 256.6 32.4 336 94-501 3-381 (386)
21 COG0520 csdA Selenocysteine ly 100.0 1.7E-30 3.6E-35 265.1 32.0 346 94-496 24-404 (405)
22 PRK00451 glycine dehydrogenase 100.0 2.8E-28 6.1E-33 255.6 29.6 376 52-495 30-446 (447)
23 TIGR03531 selenium_SpcS O-phos 100.0 5.2E-28 1.1E-32 247.7 30.1 295 63-409 28-344 (444)
24 TIGR03402 FeS_nifS cysteine de 100.0 7.1E-27 1.5E-31 240.0 32.7 308 127-505 37-379 (379)
25 cd06453 SufS_like Cysteine des 100.0 9.6E-27 2.1E-31 238.5 31.0 312 123-491 34-373 (373)
26 TIGR01977 am_tr_V_EF2568 cyste 100.0 1.5E-26 3.2E-31 237.3 30.6 305 131-493 43-375 (376)
27 PRK09295 bifunctional cysteine 100.0 5.3E-26 1.1E-30 235.6 31.8 346 94-496 25-403 (406)
28 TIGR01979 sufS cysteine desulf 100.0 6.7E-26 1.5E-30 234.7 32.0 348 94-498 20-402 (403)
29 PLN02651 cysteine desulfurase 100.0 4.4E-26 9.5E-31 232.7 28.9 291 127-485 38-364 (364)
30 TIGR02006 IscS cysteine desulf 100.0 2.7E-26 5.8E-31 237.4 27.2 341 93-499 4-379 (402)
31 PRK10874 cysteine sulfinate de 100.0 1.6E-25 3.4E-30 231.7 32.4 349 94-498 21-399 (401)
32 TIGR03392 FeS_syn_CsdA cystein 100.0 1.3E-25 2.7E-30 232.2 31.6 348 94-498 18-396 (398)
33 cd06451 AGAT_like Alanine-glyo 99.9 9.1E-26 2E-30 229.8 28.6 335 97-495 2-355 (356)
34 cd00613 GDC-P Glycine cleavage 99.9 2.9E-25 6.2E-30 229.6 30.5 366 73-491 2-398 (398)
35 PLN02414 glycine dehydrogenase 99.9 2.7E-24 5.9E-29 237.4 37.3 384 64-500 496-910 (993)
36 PRK12566 glycine dehydrogenase 99.9 2.1E-24 4.5E-29 233.8 34.1 388 63-499 470-878 (954)
37 PF00266 Aminotran_5: Aminotra 99.9 9.3E-25 2E-29 223.6 28.6 311 123-487 34-371 (371)
38 TIGR03403 nifS_epsilon cystein 99.9 3.6E-24 7.8E-29 220.2 33.0 304 129-499 40-377 (382)
39 PRK02948 cysteine desulfurase; 99.9 2E-24 4.3E-29 222.0 30.9 310 122-500 33-377 (381)
40 PLN02855 Bifunctional selenocy 99.9 3.3E-24 7.2E-29 223.3 32.5 349 93-498 33-419 (424)
41 PRK09331 Sep-tRNA:Cys-tRNA syn 99.9 9.7E-24 2.1E-28 217.0 34.6 308 134-498 65-382 (387)
42 PLN02409 serine--glyoxylate am 99.9 2.9E-24 6.3E-29 221.8 29.3 345 97-499 12-374 (401)
43 PRK14012 cysteine desulfurase; 99.9 4E-24 8.7E-29 221.3 27.1 303 132-499 49-381 (404)
44 cd06452 SepCysS Sep-tRNA:Cys-t 99.9 1.1E-22 2.5E-27 207.4 34.7 301 136-495 48-360 (361)
45 TIGR02326 transamin_PhnW 2-ami 99.9 2.3E-23 5E-28 212.7 28.3 337 98-495 7-360 (363)
46 TIGR01814 kynureninase kynuren 99.9 5.6E-23 1.2E-27 212.9 30.8 346 93-495 28-405 (406)
47 TIGR01976 am_tr_V_VC1184 cyste 99.9 5E-23 1.1E-27 212.8 30.2 332 94-491 19-397 (397)
48 KOG1549 Cysteine desulfurase N 99.9 4E-23 8.7E-28 204.1 24.7 224 90-349 41-271 (428)
49 TIGR02539 SepCysS Sep-tRNA:Cys 99.9 6.9E-22 1.5E-26 202.1 33.9 303 136-497 55-368 (370)
50 TIGR03301 PhnW-AepZ 2-aminoeth 99.9 3.1E-22 6.6E-27 203.6 30.1 337 98-494 3-354 (355)
51 COG0075 Serine-pyruvate aminot 99.9 2.9E-22 6.2E-27 199.1 27.2 319 125-500 31-366 (383)
52 PRK13479 2-aminoethylphosphona 99.9 1.3E-21 2.7E-26 200.2 30.2 343 98-498 9-364 (368)
53 TIGR03235 DNA_S_dndA cysteine 99.9 9.7E-22 2.1E-26 199.9 27.9 251 127-422 37-301 (353)
54 PRK07179 hypothetical protein; 99.9 9.3E-21 2E-25 196.4 31.3 327 89-498 58-399 (407)
55 cd06502 TA_like Low-specificit 99.9 2.6E-21 5.6E-26 195.5 25.0 290 134-493 34-337 (338)
56 COG0156 BioF 7-keto-8-aminopel 99.9 1.5E-20 3.3E-25 188.6 30.1 334 85-494 39-387 (388)
57 PTZ00094 serine hydroxymethylt 99.9 3.5E-21 7.6E-26 201.6 26.3 301 128-497 76-408 (452)
58 PRK03080 phosphoserine aminotr 99.9 6.8E-21 1.5E-25 195.1 26.4 341 92-500 10-376 (378)
59 PLN02721 threonine aldolase 99.9 1.1E-20 2.4E-25 192.0 27.0 299 126-496 38-351 (353)
60 TIGR01822 2am3keto_CoA 2-amino 99.9 7.4E-20 1.6E-24 188.9 33.2 293 133-498 84-390 (393)
61 cd00609 AAT_like Aspartate ami 99.9 2.5E-20 5.3E-25 188.7 29.0 313 115-493 23-350 (350)
62 PRK05367 glycine dehydrogenase 99.9 7.7E-20 1.7E-24 203.3 32.3 357 53-492 42-437 (954)
63 COG0436 Aspartate/tyrosine/aro 99.9 1.2E-19 2.6E-24 185.6 29.4 329 104-497 41-391 (393)
64 COG2008 GLY1 Threonine aldolas 99.9 1.4E-20 3E-25 181.8 21.0 298 121-495 28-341 (342)
65 PRK08361 aspartate aminotransf 99.9 1E-19 2.2E-24 187.7 28.2 325 107-497 49-390 (391)
66 cd06454 KBL_like KBL_like; thi 99.9 3.9E-19 8.5E-24 180.3 31.9 329 91-494 7-348 (349)
67 PRK06108 aspartate aminotransf 99.9 2E-19 4.4E-24 184.9 28.8 323 107-496 40-381 (382)
68 PRK05764 aspartate aminotransf 99.9 3.4E-19 7.4E-24 184.0 30.3 329 107-497 47-391 (393)
69 cd00611 PSAT_like Phosphoserin 99.9 1.7E-20 3.8E-25 190.5 19.8 331 97-495 2-354 (355)
70 PRK05937 8-amino-7-oxononanoat 99.9 8.1E-19 1.8E-23 179.5 31.6 338 87-499 6-352 (370)
71 PLN02724 Molybdenum cofactor s 99.9 1.9E-19 4.1E-24 200.3 29.0 288 94-410 36-360 (805)
72 PRK13580 serine hydroxymethylt 99.9 2.5E-19 5.5E-24 184.0 27.0 321 124-498 87-446 (493)
73 PF02347 GDC-P: Glycine cleava 99.9 1.1E-19 2.4E-24 183.3 23.9 363 51-491 29-429 (429)
74 PLN02414 glycine dehydrogenase 99.9 1.1E-18 2.3E-23 193.3 33.9 358 54-493 68-465 (993)
75 COG1103 Archaea-specific pyrid 99.8 2.5E-18 5.5E-23 158.0 28.0 296 139-497 68-380 (382)
76 cd00615 Orn_deC_like Ornithine 99.8 6.2E-20 1.3E-24 181.7 18.7 228 135-408 62-294 (294)
77 COG1003 GcvP Glycine cleavage 99.8 2.1E-18 4.6E-23 168.6 28.8 381 65-502 40-452 (496)
78 TIGR01437 selA_rel uncharacter 99.8 1.2E-18 2.7E-23 177.3 28.0 313 105-494 25-362 (363)
79 PRK06939 2-amino-3-ketobutyrat 99.8 3.9E-18 8.5E-23 176.2 32.1 298 129-498 84-394 (397)
80 cd00378 SHMT Serine-glycine hy 99.8 6.1E-19 1.3E-23 182.6 25.1 332 95-496 21-384 (402)
81 KOG1368 Threonine aldolase [Am 99.8 1.2E-19 2.7E-24 168.7 17.2 299 122-493 50-364 (384)
82 cd00616 AHBA_syn 3-amino-5-hyd 99.8 2E-18 4.4E-23 175.3 28.0 301 125-492 15-352 (352)
83 PLN02483 serine palmitoyltrans 99.8 1.6E-17 3.6E-22 175.0 34.6 337 87-498 102-467 (489)
84 PRK05355 3-phosphoserine/phosp 99.8 3.7E-19 8E-24 180.6 20.6 329 98-496 7-357 (360)
85 PTZ00433 tyrosine aminotransfe 99.8 1.5E-17 3.4E-22 172.5 33.1 337 105-498 51-409 (412)
86 TIGR01821 5aminolev_synth 5-am 99.8 1.4E-17 3.1E-22 172.3 32.0 291 134-498 92-397 (402)
87 PLN03226 serine hydroxymethylt 99.8 2.6E-18 5.7E-23 179.5 26.3 315 127-497 75-419 (475)
88 PRK07324 transaminase; Validat 99.8 5.1E-18 1.1E-22 173.7 28.0 303 121-497 55-370 (373)
89 KOG2862 Alanine-glyoxylate ami 99.8 9.2E-18 2E-22 157.3 26.7 337 98-497 21-382 (385)
90 PF01276 OKR_DC_1: Orn/Lys/Arg 99.8 1.5E-19 3.4E-24 182.4 16.0 286 75-413 3-324 (417)
91 PLN02656 tyrosine transaminase 99.8 2.9E-17 6.3E-22 170.2 33.4 333 106-499 50-405 (409)
92 PLN00145 tyrosine/nicotianamin 99.8 8.8E-18 1.9E-22 174.9 29.4 319 123-500 89-427 (430)
93 PRK06207 aspartate aminotransf 99.8 2.7E-17 5.9E-22 170.2 32.8 312 122-498 72-403 (405)
94 PRK05958 8-amino-7-oxononanoat 99.8 1.5E-17 3.2E-22 171.1 30.6 289 131-494 83-384 (385)
95 PLN02955 8-amino-7-oxononanoat 99.8 2.3E-17 4.9E-22 169.5 31.4 305 131-499 146-463 (476)
96 PRK00011 glyA serine hydroxyme 99.8 3.2E-18 7E-23 178.0 25.7 299 128-496 67-388 (416)
97 PLN02822 serine palmitoyltrans 99.8 3.6E-17 7.8E-22 172.0 33.7 305 131-500 153-480 (481)
98 PRK13392 5-aminolevulinate syn 99.8 1.8E-17 3.8E-22 172.1 30.9 291 136-498 95-398 (410)
99 PRK13034 serine hydroxymethylt 99.8 4.8E-18 1E-22 175.9 26.5 303 127-497 69-392 (416)
100 PRK07682 hypothetical protein; 99.8 7.6E-18 1.6E-22 173.0 27.6 310 122-498 51-377 (378)
101 PRK06225 aspartate aminotransf 99.8 1E-17 2.2E-22 172.1 28.2 294 136-500 70-379 (380)
102 PTZ00377 alanine aminotransfer 99.8 7.3E-17 1.6E-21 170.6 34.7 329 121-498 108-476 (481)
103 PRK09064 5-aminolevulinate syn 99.8 2.8E-17 6.1E-22 170.5 30.5 290 135-498 94-398 (407)
104 PRK15029 arginine decarboxylas 99.8 2.4E-17 5.3E-22 178.0 30.1 234 75-333 142-402 (755)
105 TIGR00461 gcvP glycine dehydro 99.8 4E-17 8.6E-22 178.7 31.9 360 53-492 30-426 (939)
106 PLN02187 rooty/superroot1 99.8 6.7E-17 1.4E-21 169.5 32.3 319 122-499 102-440 (462)
107 TIGR01366 serC_3 phosphoserine 99.8 3E-18 6.6E-23 174.2 21.4 304 125-498 34-361 (361)
108 PRK13355 bifunctional HTH-doma 99.8 4.2E-17 9E-22 173.9 30.9 315 122-497 179-514 (517)
109 PF00155 Aminotran_1_2: Aminot 99.8 7.3E-18 1.6E-22 172.1 23.7 312 121-491 37-363 (363)
110 TIGR01364 serC_1 phosphoserine 99.8 3.7E-18 8.1E-23 172.4 21.2 302 126-496 31-347 (349)
111 PLN02231 alanine transaminase 99.8 2.4E-16 5.1E-21 167.4 35.2 328 121-499 161-529 (534)
112 TIGR01825 gly_Cac_T_rel pyrido 99.8 1E-16 2.3E-21 164.9 31.7 298 127-498 73-382 (385)
113 PRK07681 aspartate aminotransf 99.8 8.3E-17 1.8E-21 166.5 30.8 322 106-495 47-386 (399)
114 PLN00175 aminotransferase fami 99.8 4.8E-17 1E-21 168.6 28.9 323 107-496 70-412 (413)
115 PRK13393 5-aminolevulinate syn 99.8 1.7E-16 3.6E-21 164.5 32.6 292 133-498 91-397 (406)
116 PRK08363 alanine aminotransfer 99.8 3E-17 6.6E-22 169.7 26.9 327 108-497 50-394 (398)
117 TIGR01265 tyr_nico_aTase tyros 99.8 2.6E-16 5.6E-21 162.9 33.9 319 123-497 68-401 (403)
118 PRK08861 cystathionine gamma-s 99.8 3.2E-17 7E-22 167.3 26.6 219 125-413 50-274 (388)
119 PLN00143 tyrosine/nicotianamin 99.8 1.4E-16 3E-21 165.2 31.6 340 105-500 50-407 (409)
120 PRK07550 hypothetical protein; 99.8 1.2E-16 2.6E-21 164.6 30.6 324 107-495 45-385 (386)
121 TIGR01141 hisC histidinol-phos 99.8 3.5E-17 7.6E-22 166.0 26.1 278 136-492 58-346 (346)
122 PRK08912 hypothetical protein; 99.8 1.5E-16 3.3E-21 163.8 30.8 308 122-495 57-384 (387)
123 PRK06290 aspartate aminotransf 99.8 2E-16 4.2E-21 163.8 31.2 311 128-498 81-406 (410)
124 PLN02376 1-aminocyclopropane-1 99.8 1.8E-16 3.9E-21 167.3 31.3 315 125-497 91-438 (496)
125 PRK05957 aspartate aminotransf 99.8 2.5E-16 5.5E-21 162.2 31.6 325 108-499 44-387 (389)
126 PRK07777 aminotransferase; Val 99.8 1E-16 2.2E-21 165.1 28.6 320 113-495 46-384 (387)
127 TIGR00858 bioF 8-amino-7-oxono 99.8 2.4E-16 5.2E-21 160.5 31.0 286 133-492 62-360 (360)
128 COG1168 MalY Bifunctional PLP- 99.8 1.1E-16 2.4E-21 155.1 26.6 327 106-495 40-384 (388)
129 PRK09082 methionine aminotrans 99.8 4.9E-17 1.1E-21 167.4 25.8 317 109-493 48-385 (386)
130 PRK08960 hypothetical protein; 99.8 9.1E-17 2E-21 165.5 27.8 322 106-494 47-384 (387)
131 PLN03227 serine palmitoyltrans 99.8 1.1E-15 2.3E-20 157.3 34.4 306 127-499 42-384 (392)
132 TIGR01264 tyr_amTase_E tyrosin 99.8 5.2E-16 1.1E-20 160.6 32.3 335 107-497 51-399 (401)
133 PRK07309 aromatic amino acid a 99.8 4.4E-16 9.5E-21 160.6 31.6 313 123-498 62-389 (391)
134 PRK12414 putative aminotransfe 99.8 3E-16 6.5E-21 161.4 30.2 321 107-493 45-383 (384)
135 PRK13238 tnaA tryptophanase/L- 99.8 3.5E-16 7.5E-21 163.3 31.0 329 110-497 60-433 (460)
136 COG0399 WecE Predicted pyridox 99.8 2.1E-16 4.6E-21 157.6 27.9 325 110-496 18-372 (374)
137 PRK07568 aspartate aminotransf 99.8 5.9E-16 1.3E-20 160.0 32.5 326 107-499 46-394 (397)
138 TIGR03537 DapC succinyldiamino 99.8 2.8E-16 6E-21 159.6 29.5 305 122-493 30-349 (350)
139 PRK15400 lysine decarboxylase 99.8 1.1E-16 2.4E-21 171.1 27.3 366 75-497 132-559 (714)
140 PRK06107 aspartate aminotransf 99.8 2.1E-16 4.5E-21 163.6 28.5 332 109-498 51-401 (402)
141 PRK07504 O-succinylhomoserine 99.8 1.8E-16 4E-21 163.1 27.6 219 126-413 63-286 (398)
142 PRK07337 aminotransferase; Val 99.8 4.8E-16 1E-20 160.2 30.7 320 109-494 48-386 (388)
143 PRK05613 O-acetylhomoserine am 99.8 1.7E-16 3.7E-21 164.3 26.9 240 126-413 67-326 (437)
144 PRK05942 aspartate aminotransf 99.8 5.7E-16 1.2E-20 159.9 30.9 304 122-494 67-386 (394)
145 PRK08134 O-acetylhomoserine am 99.8 2.1E-16 4.5E-21 163.7 27.6 239 126-413 62-317 (433)
146 PRK06767 methionine gamma-lyas 99.8 1.6E-16 3.5E-21 163.1 26.6 281 126-497 59-385 (386)
147 PRK08133 O-succinylhomoserine 99.8 2.5E-16 5.4E-21 161.8 27.9 217 126-413 59-281 (390)
148 TIGR01328 met_gam_lyase methio 99.8 1.4E-16 3.1E-21 163.5 25.9 220 125-413 56-281 (391)
149 PRK15399 lysine decarboxylase 99.8 4.3E-16 9.3E-21 166.6 30.1 364 75-496 132-558 (713)
150 TIGR03540 DapC_direct LL-diami 99.8 6.7E-16 1.5E-20 158.8 30.7 307 122-493 61-382 (383)
151 PRK11658 UDP-4-amino-4-deoxy-L 99.8 2E-16 4.3E-21 162.2 26.1 312 126-495 31-377 (379)
152 PRK06348 aspartate aminotransf 99.8 4.9E-16 1.1E-20 159.9 29.1 306 122-494 60-382 (384)
153 PRK09265 aminotransferase AlaT 99.8 6E-16 1.3E-20 160.3 29.7 313 122-497 66-401 (404)
154 PLN02450 1-aminocyclopropane-1 99.8 8.3E-16 1.8E-20 161.5 31.0 321 124-499 82-432 (468)
155 TIGR01329 cysta_beta_ly_E cyst 99.8 1.8E-16 4E-21 162.0 25.3 211 136-413 51-267 (378)
156 cd00614 CGS_like CGS_like: Cys 99.8 1.1E-16 2.3E-21 163.7 23.4 218 126-413 38-261 (369)
157 PRK08248 O-acetylhomoserine am 99.8 2.6E-16 5.6E-21 163.1 26.4 240 125-413 61-317 (431)
158 PRK08068 transaminase; Reviewe 99.8 1.1E-15 2.4E-20 157.5 30.9 316 109-493 50-385 (389)
159 PRK08114 cystathionine beta-ly 99.8 2.6E-16 5.5E-21 160.2 25.5 219 124-413 58-284 (395)
160 PRK14807 histidinol-phosphate 99.8 1.5E-15 3.1E-20 154.4 31.0 276 139-494 66-349 (351)
161 PRK08776 cystathionine gamma-s 99.8 3E-16 6.5E-21 161.5 26.0 218 126-413 58-281 (405)
162 PRK08056 threonine-phosphate d 99.8 5.8E-16 1.3E-20 157.7 27.7 284 135-495 58-353 (356)
163 TIGR03588 PseC UDP-4-keto-6-de 99.8 5.7E-16 1.2E-20 159.1 27.9 315 125-494 26-379 (380)
164 PRK10534 L-threonine aldolase; 99.8 2.7E-16 5.8E-21 158.7 24.7 291 122-495 28-331 (333)
165 PRK08249 cystathionine gamma-s 99.8 4.7E-16 1E-20 159.8 26.8 219 125-413 61-284 (398)
166 PRK13578 ornithine decarboxyla 99.7 5.7E-16 1.2E-20 165.8 28.0 233 75-333 111-371 (720)
167 PLN02509 cystathionine beta-ly 99.7 2.9E-16 6.2E-21 163.1 25.1 214 133-413 134-353 (464)
168 PRK09147 succinyldiaminopimela 99.7 1.8E-15 3.9E-20 156.4 30.6 323 107-495 45-394 (396)
169 PRK08636 aspartate aminotransf 99.7 3.3E-15 7.2E-20 154.7 32.5 335 105-497 48-400 (403)
170 PRK08045 cystathionine gamma-s 99.7 5.4E-16 1.2E-20 158.7 26.1 221 126-413 50-273 (386)
171 PRK07812 O-acetylhomoserine am 99.7 6.8E-16 1.5E-20 159.7 26.8 240 126-413 67-321 (436)
172 PRK05968 hypothetical protein; 99.7 7E-16 1.5E-20 158.4 26.6 217 126-413 61-283 (389)
173 PRK09028 cystathionine beta-ly 99.7 8E-16 1.7E-20 157.0 26.5 217 126-413 59-281 (394)
174 TIGR01324 cysta_beta_ly_B cyst 99.7 3.3E-16 7.1E-21 159.7 23.6 218 125-413 47-270 (377)
175 PRK07811 cystathionine gamma-s 99.7 6.6E-16 1.4E-20 158.5 26.0 218 126-413 59-282 (388)
176 TIGR03576 pyridox_MJ0158 pyrid 99.7 2.9E-15 6.2E-20 151.3 30.2 327 72-494 7-344 (346)
177 PRK05387 histidinol-phosphate 99.7 2.2E-15 4.8E-20 153.2 29.7 280 136-495 64-351 (353)
178 PRK08574 cystathionine gamma-s 99.7 5.8E-16 1.3E-20 158.6 25.4 218 125-413 50-273 (385)
179 PRK00950 histidinol-phosphate 99.7 7E-16 1.5E-20 157.4 25.6 278 136-495 73-360 (361)
180 PRK06855 aminotransferase; Val 99.7 3E-15 6.4E-20 156.3 30.6 351 105-499 49-431 (433)
181 PRK06358 threonine-phosphate d 99.7 3.6E-15 7.7E-20 151.7 30.2 285 128-495 54-353 (354)
182 PRK08064 cystathionine beta-ly 99.7 7.5E-16 1.6E-20 158.2 25.3 217 126-413 52-274 (390)
183 PRK07683 aminotransferase A; V 99.7 3.5E-15 7.7E-20 153.6 30.3 321 107-496 44-382 (387)
184 PLN02607 1-aminocyclopropane-1 99.7 2E-15 4.4E-20 157.5 28.6 315 128-498 95-438 (447)
185 PRK07366 succinyldiaminopimela 99.7 4E-15 8.8E-20 153.3 30.4 320 109-494 48-387 (388)
186 PRK04870 histidinol-phosphate 99.7 2.4E-15 5.2E-20 153.2 28.4 279 137-494 68-355 (356)
187 PRK06836 aspartate aminotransf 99.7 5.7E-15 1.2E-19 152.4 31.4 322 106-497 48-391 (394)
188 PRK07050 cystathionine beta-ly 99.7 1.2E-15 2.6E-20 156.7 26.0 218 126-413 63-286 (394)
189 COG0403 GcvP Glycine cleavage 99.7 3.1E-15 6.7E-20 146.8 27.0 371 53-494 39-447 (450)
190 PRK05994 O-acetylhomoserine am 99.7 1.8E-15 3.9E-20 156.9 27.1 237 126-413 61-316 (427)
191 PRK06234 methionine gamma-lyas 99.7 1.4E-15 2.9E-20 156.8 25.7 218 126-413 62-288 (400)
192 KOG0259 Tyrosine aminotransfer 99.7 8.5E-15 1.8E-19 141.1 29.0 359 91-502 69-438 (447)
193 PRK09276 LL-diaminopimelate am 99.7 5.8E-15 1.3E-19 152.0 30.1 319 108-493 48-384 (385)
194 PRK07810 O-succinylhomoserine 99.7 2.3E-15 5.1E-20 154.9 27.0 219 125-413 67-291 (403)
195 PRK01688 histidinol-phosphate 99.7 6.3E-16 1.4E-20 157.1 22.2 277 135-492 60-351 (351)
196 cd01494 AAT_I Aspartate aminot 99.7 1.1E-16 2.4E-21 144.4 14.8 166 136-331 4-170 (170)
197 PRK06084 O-acetylhomoserine am 99.7 3.7E-15 8.1E-20 154.3 27.7 239 126-413 56-312 (425)
198 TIGR03538 DapC_gpp succinyldia 99.7 1E-14 2.3E-19 150.5 30.8 321 106-494 43-392 (393)
199 TIGR01325 O_suc_HS_sulf O-succ 99.7 2.8E-15 6E-20 153.7 26.0 217 126-413 52-274 (380)
200 PLN02271 serine hydroxymethylt 99.7 1.9E-15 4.2E-20 156.0 24.7 321 125-496 187-539 (586)
201 cd00617 Tnase_like Tryptophana 99.7 4.1E-15 8.9E-20 153.2 26.8 317 122-497 47-408 (431)
202 PRK02731 histidinol-phosphate 99.7 4.1E-15 8.8E-20 152.1 26.7 283 137-496 72-365 (367)
203 PRK05939 hypothetical protein; 99.7 1.3E-15 2.9E-20 156.3 22.9 239 125-413 44-288 (397)
204 cd00610 OAT_like Acetyl ornith 99.7 1.6E-14 3.4E-19 150.1 31.3 310 130-494 77-412 (413)
205 PRK04635 histidinol-phosphate 99.7 1.7E-15 3.7E-20 154.1 23.4 275 138-494 66-352 (354)
206 PRK07503 methionine gamma-lyas 99.7 4.5E-15 9.8E-20 153.0 26.7 219 126-413 63-287 (403)
207 PF01041 DegT_DnrJ_EryC1: DegT 99.7 4.7E-15 1E-19 151.2 26.6 300 127-492 24-363 (363)
208 TIGR01365 serC_2 phosphoserine 99.7 1.3E-15 2.9E-20 154.0 22.1 338 104-495 14-371 (374)
209 TIGR02080 O_succ_thio_ly O-suc 99.7 3.9E-15 8.4E-20 152.3 25.8 221 126-413 49-272 (382)
210 PRK03158 histidinol-phosphate 99.7 9.3E-15 2E-19 149.0 28.3 284 128-494 64-358 (359)
211 PRK05166 histidinol-phosphate 99.7 6.6E-15 1.4E-19 150.8 26.9 283 136-495 75-369 (371)
212 PRK07671 cystathionine beta-ly 99.7 3.6E-15 7.8E-20 152.4 24.8 217 126-413 48-270 (377)
213 PRK09148 aminotransferase; Val 99.7 2.5E-14 5.5E-19 148.1 31.5 312 122-498 62-391 (405)
214 PRK03317 histidinol-phosphate 99.7 2E-14 4.3E-19 147.1 30.1 291 127-497 64-364 (368)
215 PRK15481 transcriptional regul 99.7 1.5E-14 3.3E-19 151.0 29.6 297 123-496 116-430 (431)
216 PRK06176 cystathionine gamma-s 99.7 5.4E-15 1.2E-19 151.2 25.2 218 125-413 47-270 (380)
217 PLN03026 histidinol-phosphate 99.7 1.4E-14 3.1E-19 148.7 28.3 281 136-494 90-379 (380)
218 PRK07269 cystathionine gamma-s 99.7 4.1E-15 8.8E-20 151.1 23.4 229 125-422 51-288 (364)
219 PLN02452 phosphoserine transam 99.7 4.5E-15 9.8E-20 150.1 23.1 334 94-497 7-363 (365)
220 PRK03244 argD acetylornithine 99.7 2.7E-14 5.8E-19 147.7 29.4 289 135-499 88-396 (398)
221 TIGR01140 L_thr_O3P_dcar L-thr 99.7 7.8E-15 1.7E-19 147.8 24.6 268 135-491 50-329 (330)
222 PRK08175 aminotransferase; Val 99.7 7E-14 1.5E-18 144.4 32.2 314 121-497 60-389 (395)
223 PRK00854 rocD ornithine--oxo-a 99.7 6.1E-14 1.3E-18 145.2 31.8 291 136-495 87-399 (401)
224 PRK15407 lipopolysaccharide bi 99.7 2.8E-14 6.1E-19 148.3 29.1 254 126-411 61-330 (438)
225 PLN02242 methionine gamma-lyas 99.7 2.1E-14 4.5E-19 148.4 28.0 217 126-409 74-297 (418)
226 PRK08247 cystathionine gamma-s 99.7 9.1E-15 2E-19 149.2 24.6 226 126-422 50-288 (366)
227 PRK09105 putative aminotransfe 99.7 5.3E-14 1.1E-18 143.9 30.1 276 137-495 83-368 (370)
228 PRK08153 histidinol-phosphate 99.7 3.2E-14 6.9E-19 145.6 28.2 290 130-499 69-367 (369)
229 PRK05967 cystathionine beta-ly 99.7 1.5E-14 3.2E-19 147.5 25.2 217 126-413 62-284 (395)
230 KOG1360 5-aminolevulinate synt 99.7 3.5E-14 7.5E-19 137.3 25.9 294 128-498 216-525 (570)
231 TIGR02379 ECA_wecE TDP-4-keto- 99.7 2.2E-14 4.7E-19 146.6 26.1 310 127-495 30-375 (376)
232 PRK06460 hypothetical protein; 99.7 1.5E-14 3.4E-19 147.8 25.0 218 125-413 42-265 (376)
233 PRK07908 hypothetical protein; 99.7 3E-14 6.6E-19 144.7 27.0 300 105-496 36-346 (349)
234 PLN02368 alanine transaminase 99.7 3.1E-14 6.8E-19 146.7 27.0 269 105-413 82-381 (407)
235 PRK07582 cystathionine gamma-l 99.7 1.5E-14 3.3E-19 147.4 24.4 214 126-413 49-268 (366)
236 PRK06702 O-acetylhomoserine am 99.7 1.5E-14 3.3E-19 148.9 24.6 240 126-413 59-314 (432)
237 PLN02672 methionine S-methyltr 99.7 5.3E-14 1.2E-18 156.6 29.6 319 131-496 733-1079(1082)
238 KOG0630 Predicted pyridoxal-de 99.7 1.5E-14 3.3E-19 142.8 22.4 262 130-413 163-437 (838)
239 PRK02610 histidinol-phosphate 99.7 9.5E-14 2.1E-18 142.3 29.6 297 128-498 66-372 (374)
240 KOG1359 Glycine C-acetyltransf 99.7 4.1E-14 8.8E-19 131.8 23.8 292 131-498 111-413 (417)
241 TIGR01326 OAH_OAS_sulfhy OAH/O 99.7 2.5E-14 5.4E-19 148.3 25.1 237 126-413 55-309 (418)
242 PRK06434 cystathionine gamma-l 99.7 2.3E-14 4.9E-19 146.0 24.1 226 124-422 60-308 (384)
243 COG2873 MET17 O-acetylhomoseri 99.7 3E-14 6.4E-19 137.4 23.1 305 123-496 57-424 (426)
244 PF01212 Beta_elim_lyase: Beta 99.7 7.1E-16 1.5E-20 150.9 12.2 242 117-410 18-271 (290)
245 PRK04073 rocD ornithine--oxo-a 99.6 1.7E-13 3.6E-18 141.6 30.1 289 133-495 83-395 (396)
246 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.6 3.1E-14 6.7E-19 145.9 24.4 299 134-495 33-374 (375)
247 PRK07505 hypothetical protein; 99.6 2.8E-13 6E-18 140.3 31.3 296 130-497 89-399 (402)
248 PRK04781 histidinol-phosphate 99.6 1.6E-13 3.5E-18 140.1 28.8 284 136-495 63-361 (364)
249 PRK03321 putative aminotransfe 99.6 8.4E-14 1.8E-18 141.6 26.5 282 128-495 57-349 (352)
250 PRK12566 glycine dehydrogenase 99.6 1E-13 2.2E-18 151.3 28.5 358 52-492 44-439 (954)
251 PRK01533 histidinol-phosphate 99.6 9.6E-14 2.1E-18 141.7 26.7 274 138-498 70-356 (366)
252 PTZ00376 aspartate aminotransf 99.6 2.7E-13 5.8E-18 140.5 29.8 323 107-496 50-402 (404)
253 TIGR03246 arg_catab_astC succi 99.6 4.8E-13 1E-17 138.1 31.3 296 134-498 79-396 (397)
254 PRK12462 phosphoserine aminotr 99.6 5.8E-14 1.3E-18 140.7 23.5 333 95-497 5-362 (364)
255 PRK04311 selenocysteine syntha 99.6 3.1E-13 6.7E-18 140.5 29.7 160 136-332 131-307 (464)
256 TIGR00474 selA seryl-tRNA(sec) 99.6 7.5E-13 1.6E-17 137.3 32.1 161 135-332 125-302 (454)
257 KOG0256 1-aminocyclopropane-1- 99.6 2E-13 4.3E-18 133.0 25.6 322 127-496 120-460 (471)
258 PTZ00125 ornithine aminotransf 99.6 3.8E-13 8.3E-18 139.2 29.9 301 133-499 74-397 (400)
259 KOG0257 Kynurenine aminotransf 99.6 1.3E-14 2.8E-19 142.3 17.7 292 74-413 18-329 (420)
260 PRK07590 L,L-diaminopimelate a 99.6 4.2E-13 9.2E-18 139.2 29.2 318 107-494 50-408 (409)
261 PF01053 Cys_Met_Meta_PP: Cys/ 99.6 1.5E-13 3.2E-18 139.8 24.8 281 125-495 52-385 (386)
262 PF00464 SHMT: Serine hydroxym 99.6 1.4E-13 3E-18 138.9 24.0 330 95-489 22-397 (399)
263 PRK09257 aromatic amino acid a 99.6 5.5E-13 1.2E-17 137.8 29.2 321 107-494 47-395 (396)
264 PRK06425 histidinol-phosphate 99.6 4.3E-13 9.4E-18 135.2 27.6 272 136-495 44-331 (332)
265 PRK05839 hypothetical protein; 99.6 6.4E-13 1.4E-17 136.2 29.1 311 107-495 40-372 (374)
266 PRK14809 histidinol-phosphate 99.6 1E-12 2.2E-17 133.9 30.2 283 128-495 65-355 (357)
267 COG3844 Kynureninase [Amino ac 99.6 4.2E-13 9.1E-18 127.1 24.8 308 128-499 72-404 (407)
268 TIGR02618 tyr_phenol_ly tyrosi 99.6 1.9E-12 4.1E-17 131.7 30.8 340 94-497 39-426 (450)
269 PRK07865 N-succinyldiaminopime 99.6 7.5E-13 1.6E-17 135.3 28.4 303 108-492 44-363 (364)
270 PRK09275 aspartate aminotransf 99.6 2.2E-12 4.7E-17 135.7 32.3 208 105-333 114-328 (527)
271 TIGR01885 Orn_aminotrans ornit 99.6 3.9E-12 8.4E-17 131.7 33.2 300 132-495 79-400 (401)
272 COG1167 ARO8 Transcriptional r 99.6 1.3E-12 2.8E-17 136.8 29.8 329 105-499 105-457 (459)
273 TIGR00707 argD acetylornithine 99.6 2.5E-12 5.4E-17 132.1 30.9 296 132-494 69-378 (379)
274 TIGR03539 DapC_actino succinyl 99.6 2E-12 4.3E-17 131.7 29.8 286 123-491 51-356 (357)
275 PRK07392 threonine-phosphate d 99.6 2.7E-12 5.7E-17 131.0 30.8 284 130-495 59-357 (360)
276 TIGR03801 asp_4_decarbox aspar 99.6 4.9E-12 1.1E-16 132.8 33.2 282 11-333 30-327 (521)
277 PRK08637 hypothetical protein; 99.6 2.5E-12 5.4E-17 132.5 30.3 330 107-498 23-387 (388)
278 PRK02936 argD acetylornithine 99.6 3.6E-12 7.9E-17 130.8 29.9 286 130-494 69-376 (377)
279 COG0112 GlyA Glycine/serine hy 99.6 3.9E-13 8.4E-18 131.2 21.1 239 124-413 64-306 (413)
280 PRK05093 argD bifunctional N-s 99.6 9.6E-12 2.1E-16 128.8 32.5 294 135-498 85-401 (403)
281 PRK01278 argD acetylornithine 99.6 4.3E-12 9.2E-17 130.9 29.5 294 134-497 75-388 (389)
282 PRK02627 acetylornithine amino 99.6 3.2E-12 7E-17 132.1 28.3 298 131-498 80-395 (396)
283 PLN02624 ornithine-delta-amino 99.5 1.5E-11 3.2E-16 129.5 33.0 303 133-497 118-444 (474)
284 PRK09440 avtA valine--pyruvate 99.5 2.5E-12 5.4E-17 133.8 27.0 335 106-501 47-415 (416)
285 PRK13237 tyrosine phenol-lyase 99.5 5.8E-12 1.3E-16 128.5 28.4 315 122-497 72-433 (460)
286 PRK03967 histidinol-phosphate 99.5 9E-12 2E-16 125.9 29.1 274 128-496 55-333 (337)
287 PRK03715 argD acetylornithine 99.5 8.3E-12 1.8E-16 128.5 28.9 305 130-498 76-394 (395)
288 PRK07049 methionine gamma-lyas 99.5 7.8E-12 1.7E-16 129.8 28.4 223 126-413 81-315 (427)
289 PRK05964 adenosylmethionine--8 99.5 2.2E-11 4.8E-16 126.8 31.9 314 131-498 84-423 (423)
290 PRK12381 bifunctional succinyl 99.5 1.6E-11 3.5E-16 127.2 30.6 298 135-502 84-404 (406)
291 PLN02397 aspartate transaminas 99.5 2.3E-11 4.9E-16 126.7 31.4 315 108-496 70-420 (423)
292 PRK14808 histidinol-phosphate 99.5 8.1E-12 1.8E-16 126.0 27.2 273 128-494 56-334 (335)
293 PF05889 SLA_LP_auto_ag: Solub 99.5 7.4E-13 1.6E-17 130.9 18.9 310 129-496 53-389 (389)
294 COG0079 HisC Histidinol-phosph 99.5 1.8E-11 3.9E-16 123.5 28.8 278 138-497 63-354 (356)
295 PRK05664 threonine-phosphate d 99.5 2.5E-11 5.5E-16 122.2 27.4 262 137-497 54-328 (330)
296 PRK08354 putative aminotransfe 99.5 1.7E-11 3.7E-16 122.4 25.8 148 137-330 45-196 (311)
297 PRK11522 putrescine--2-oxoglut 99.5 7.4E-11 1.6E-15 123.4 30.6 308 131-500 123-454 (459)
298 PRK06959 putative threonine-ph 99.5 5.1E-11 1.1E-15 120.4 28.2 272 135-501 56-337 (339)
299 PRK04260 acetylornithine amino 99.5 4.5E-11 9.8E-16 122.6 28.1 291 130-494 68-374 (375)
300 TIGR03542 DAPAT_plant LL-diami 99.4 6.1E-11 1.3E-15 122.8 28.1 304 123-494 70-401 (402)
301 PRK09264 diaminobutyrate--2-ox 99.4 1.9E-10 4E-15 119.8 31.6 312 132-501 82-420 (425)
302 PLN02760 4-aminobutyrate:pyruv 99.4 3.4E-10 7.3E-15 119.6 33.7 327 131-498 132-492 (504)
303 KOG1357 Serine palmitoyltransf 99.4 3.8E-12 8.3E-17 125.4 17.4 337 90-498 141-503 (519)
304 COG1982 LdcC Arginine/lysine/o 99.4 2.7E-11 5.8E-16 125.2 24.4 232 131-413 71-316 (557)
305 COG0626 MetC Cystathionine bet 99.4 5.8E-11 1.3E-15 119.5 25.3 220 125-413 60-286 (396)
306 KOG2040 Glycine dehydrogenase 99.4 3.5E-11 7.6E-16 122.9 23.4 325 125-499 575-920 (1001)
307 PRK08117 4-aminobutyrate amino 99.4 6.1E-10 1.3E-14 116.4 33.1 313 132-499 86-431 (433)
308 TIGR03372 putres_am_tran putre 99.4 5.1E-10 1.1E-14 116.4 32.1 302 131-494 116-441 (442)
309 COG0001 HemL Glutamate-1-semia 99.4 3.3E-10 7.1E-15 113.6 27.3 310 130-500 91-431 (432)
310 PRK04612 argD acetylornithine 99.4 1.9E-09 4.2E-14 111.4 34.0 303 131-500 81-406 (408)
311 PRK12403 putative aminotransfe 99.4 1.8E-09 3.8E-14 113.3 34.2 325 131-501 97-456 (460)
312 PRK06541 hypothetical protein; 99.4 1.6E-09 3.4E-14 113.7 33.4 326 132-500 95-458 (460)
313 COG4992 ArgD Ornithine/acetylo 99.4 3E-10 6.4E-15 112.7 25.9 292 133-500 85-401 (404)
314 PRK05769 4-aminobutyrate amino 99.4 2.1E-09 4.6E-14 112.2 33.6 311 131-498 96-440 (441)
315 KOG0053 Cystathionine beta-lya 99.4 1.8E-10 3.8E-15 114.7 23.5 217 127-413 76-298 (409)
316 PRK08360 4-aminobutyrate amino 99.4 3.5E-09 7.5E-14 110.6 34.2 318 132-504 84-433 (443)
317 PRK06105 aminotransferase; Pro 99.3 2.8E-09 6E-14 111.9 32.5 326 131-500 91-452 (460)
318 PRK09221 beta alanine--pyruvat 99.3 3.9E-09 8.5E-14 110.3 33.5 320 132-498 92-444 (445)
319 TIGR02407 ectoine_ectB diamino 99.3 2E-09 4.3E-14 111.6 30.7 308 131-496 77-411 (412)
320 COG0160 GabT 4-aminobutyrate a 99.3 3.5E-09 7.5E-14 108.1 31.2 315 132-498 99-446 (447)
321 PRK05965 hypothetical protein; 99.3 8.1E-09 1.8E-13 108.3 35.1 330 131-503 89-453 (459)
322 PRK06058 4-aminobutyrate amino 99.3 5.8E-09 1.2E-13 109.2 33.2 312 131-497 98-442 (443)
323 PRK06062 hypothetical protein; 99.3 6.1E-09 1.3E-13 109.0 32.9 320 131-500 94-448 (451)
324 PRK13360 omega amino acid--pyr 99.3 7.2E-09 1.6E-13 108.2 33.1 320 132-498 89-441 (442)
325 TIGR00713 hemL glutamate-1-sem 99.3 1.4E-09 3E-14 113.5 27.8 305 135-497 91-422 (423)
326 PRK08088 4-aminobutyrate amino 99.3 3.7E-09 8E-14 110.2 30.8 310 133-498 85-424 (425)
327 PRK07480 putative aminotransfe 99.3 1E-08 2.2E-13 107.5 33.4 327 131-501 93-452 (456)
328 PRK00062 glutamate-1-semialdeh 99.3 5.8E-09 1.3E-13 108.7 30.8 308 131-498 89-425 (426)
329 PRK07482 hypothetical protein; 99.3 7.5E-09 1.6E-13 108.7 31.7 331 131-500 93-457 (461)
330 TIGR00700 GABAtrnsam 4-aminobu 99.3 1.5E-08 3.2E-13 105.5 33.6 307 133-495 77-418 (420)
331 PRK08593 4-aminobutyrate amino 99.3 2.7E-08 5.8E-13 104.1 35.0 316 131-500 84-432 (445)
332 PRK05639 4-aminobutyrate amino 99.3 1.1E-08 2.4E-13 107.1 32.2 313 132-499 96-445 (457)
333 PRK07495 4-aminobutyrate amino 99.3 2.4E-08 5.1E-13 103.9 34.2 316 131-500 82-424 (425)
334 PLN00144 acetylornithine trans 99.3 1.2E-08 2.6E-13 104.8 31.6 299 131-498 56-381 (382)
335 TIGR02617 tnaA_trp_ase tryptop 99.3 2.5E-09 5.4E-14 108.1 25.7 325 121-497 67-441 (467)
336 PRK07678 aminotransferase; Val 99.3 1.2E-08 2.6E-13 106.8 32.0 324 132-498 89-450 (451)
337 PRK07036 hypothetical protein; 99.3 2.5E-08 5.5E-13 104.8 34.3 321 131-499 94-454 (466)
338 PRK06777 4-aminobutyrate amino 99.3 1.4E-08 3E-13 105.7 31.6 310 133-495 84-419 (421)
339 TIGR00709 dat 2,4-diaminobutyr 99.3 2.4E-08 5.1E-13 104.5 33.3 323 131-501 81-439 (442)
340 PRK09792 4-aminobutyrate trans 99.2 3.7E-08 8.1E-13 102.4 34.2 309 131-496 82-420 (421)
341 KOG0634 Aromatic amino acid am 99.2 8.7E-09 1.9E-13 101.8 27.0 321 123-497 95-466 (472)
342 PRK07481 hypothetical protein; 99.2 4.3E-08 9.2E-13 102.7 34.2 327 131-498 85-446 (449)
343 PRK06943 adenosylmethionine--8 99.2 5.1E-08 1.1E-12 102.1 34.8 318 132-501 97-450 (453)
344 PRK06082 4-aminobutyrate amino 99.2 2E-08 4.4E-13 105.3 31.7 310 131-498 112-452 (459)
345 PRK12389 glutamate-1-semialdeh 99.2 1.8E-08 3.9E-13 105.0 30.8 306 131-497 92-427 (428)
346 TIGR00508 bioA adenosylmethion 99.2 2.2E-08 4.7E-13 104.3 31.2 305 134-496 90-425 (427)
347 PLN02482 glutamate-1-semialdeh 99.2 7.6E-09 1.7E-13 108.5 27.8 307 131-498 138-474 (474)
348 PRK06149 hypothetical protein; 99.2 1.3E-08 2.7E-13 116.2 30.2 314 133-497 625-970 (972)
349 PRK06173 adenosylmethionine--8 99.2 6.4E-08 1.4E-12 100.7 32.6 312 132-500 87-428 (429)
350 KOG0258 Alanine aminotransfera 99.2 5.7E-08 1.2E-12 94.7 29.5 165 108-291 93-260 (475)
351 PRK06917 hypothetical protein; 99.2 9.7E-08 2.1E-12 99.9 34.0 330 131-500 73-440 (447)
352 PRK07483 hypothetical protein; 99.2 8.9E-08 1.9E-12 100.0 33.6 326 132-501 73-441 (443)
353 PRK07030 adenosylmethionine--8 99.2 9.2E-08 2E-12 100.5 33.1 324 131-499 89-448 (466)
354 COG3977 Alanine-alpha-ketoisov 99.2 8.3E-09 1.8E-13 97.1 22.3 327 110-500 55-414 (417)
355 PRK04013 argD acetylornithine/ 99.2 3.6E-08 7.7E-13 100.2 29.0 276 135-499 69-362 (364)
356 PRK07986 adenosylmethionine--8 99.2 3.8E-08 8.3E-13 102.2 29.9 308 132-496 86-422 (428)
357 PRK00615 glutamate-1-semialdeh 99.2 2.4E-08 5.3E-13 103.7 27.8 317 131-499 92-430 (433)
358 PRK06916 adenosylmethionine--8 99.2 8.5E-08 1.8E-12 100.7 31.8 328 131-500 98-458 (460)
359 PRK08742 adenosylmethionine--8 99.2 1.3E-07 2.7E-12 99.5 33.0 325 132-500 107-470 (472)
360 PRK06148 hypothetical protein; 99.1 4.3E-08 9.3E-13 112.0 31.0 318 131-499 662-1012(1013)
361 PRK06938 diaminobutyrate--2-ox 99.1 1E-07 2.2E-12 100.1 31.4 323 132-499 106-462 (464)
362 PRK06918 4-aminobutyrate amino 99.1 1.8E-07 3.9E-12 98.3 33.1 314 131-499 96-445 (451)
363 PRK06931 diaminobutyrate--2-ox 99.1 2.1E-07 4.5E-12 97.7 32.8 324 131-500 100-457 (459)
364 KOG2467 Glycine/serine hydroxy 99.1 5.1E-08 1.1E-12 94.2 24.2 322 124-495 78-424 (477)
365 PRK05630 adenosylmethionine--8 99.1 1.8E-07 3.9E-12 97.2 30.0 304 132-496 83-419 (422)
366 TIGR00699 GABAtrns_euk 4-amino 99.1 3.6E-07 7.8E-12 95.4 31.1 305 129-494 102-463 (464)
367 COG1932 SerC Phosphoserine ami 99.1 6.5E-08 1.4E-12 94.3 23.5 298 126-497 44-363 (365)
368 PRK07046 aminotransferase; Val 99.1 2.5E-07 5.4E-12 96.9 29.7 298 131-499 114-452 (453)
369 PRK08297 L-lysine aminotransfe 99.0 3E-07 6.4E-12 96.2 29.7 308 134-498 94-442 (443)
370 COG0161 BioA Adenosylmethionin 99.0 2.6E-07 5.7E-12 94.0 27.1 316 137-501 92-447 (449)
371 PRK06209 glutamate-1-semialdeh 99.0 1.6E-07 3.4E-12 98.1 25.3 295 131-499 87-407 (431)
372 KOG1358 Serine palmitoyltransf 99.0 5.8E-08 1.3E-12 94.7 20.1 295 139-498 146-466 (467)
373 TIGR03251 LAT_fam L-lysine 6-t 99.0 4.9E-07 1.1E-11 94.3 28.7 285 158-493 105-430 (431)
374 KOG1404 Alanine-glyoxylate ami 98.8 2E-06 4.3E-11 84.3 24.6 288 158-491 111-432 (442)
375 KOG3846 L-kynurenine hydrolase 98.8 1.3E-06 2.8E-11 82.8 22.6 333 134-499 113-463 (465)
376 PLN02974 adenosylmethionine-8- 98.8 1.5E-05 3.3E-10 88.5 31.7 229 234-495 567-816 (817)
377 KOG1401 Acetylornithine aminot 98.8 8.1E-06 1.8E-10 80.7 25.8 223 158-410 118-353 (433)
378 KOG1402 Ornithine aminotransfe 98.7 4.1E-06 8.9E-11 80.3 22.4 291 137-495 106-425 (427)
379 PF00202 Aminotran_3: Aminotra 98.6 1E-05 2.2E-10 81.7 24.2 189 131-333 58-262 (339)
380 COG1921 SelA Selenocysteine sy 98.6 2.4E-06 5.2E-11 85.2 18.3 150 158-336 85-240 (395)
381 COG1448 TyrB Aspartate/tyrosin 98.5 2.1E-05 4.5E-10 77.5 21.3 276 158-494 96-395 (396)
382 KOG0633 Histidinol phosphate a 98.5 1.8E-05 4E-10 73.5 18.0 242 192-493 112-373 (375)
383 KOG3843 Predicted serine hydro 98.4 2.8E-06 6E-11 79.0 12.2 233 129-408 54-295 (432)
384 PF12897 Aminotran_MocR: Alani 98.4 3.1E-05 6.7E-10 76.5 19.3 297 137-496 74-414 (425)
385 COG3033 TnaA Tryptophanase [Am 98.3 9.6E-05 2.1E-09 71.9 20.3 188 123-335 74-285 (471)
386 KOG2040 Glycine dehydrogenase 98.3 0.00015 3.3E-09 75.3 22.0 362 53-492 84-478 (1001)
387 PF06838 Met_gamma_lyase: Meth 98.1 0.00086 1.9E-08 66.1 22.2 168 139-336 61-242 (403)
388 PF03841 SelA: L-seryl-tRNA se 98.1 2.2E-06 4.7E-11 84.8 4.4 160 136-332 51-227 (367)
389 KOG2790 Phosphoserine aminotra 97.9 0.0029 6.3E-08 59.9 20.3 330 104-496 18-367 (370)
390 KOG1412 Aspartate aminotransfe 97.7 0.0091 2E-07 57.4 20.3 286 158-500 101-408 (410)
391 KOG1403 Predicted alanine-glyo 97.0 0.1 2.2E-06 50.1 18.6 296 158-496 104-436 (452)
392 COG4100 Cystathionine beta-lya 96.6 0.06 1.3E-06 51.7 14.0 152 139-320 72-236 (416)
393 KOG1405 4-aminobutyrate aminot 96.3 0.24 5.2E-06 48.8 15.8 216 232-497 254-483 (484)
394 PF04864 Alliinase_C: Allinase 95.3 0.29 6.3E-06 48.3 12.4 287 130-494 45-362 (363)
395 KOG1411 Aspartate aminotransfe 93.5 0.88 1.9E-05 44.9 10.9 246 190-495 145-423 (427)
396 PLN02994 1-aminocyclopropane-1 89.1 0.86 1.9E-05 40.2 5.5 62 124-201 88-151 (153)
397 COG0386 BtuE Glutathione perox 76.9 15 0.00032 32.2 7.7 84 228-320 38-133 (162)
398 PF07071 DUF1341: Protein of u 69.1 27 0.00058 32.0 7.7 67 203-282 136-205 (218)
399 cd01455 vWA_F11C1-5a_type Von 68.5 16 0.00034 33.5 6.3 52 234-285 95-148 (191)
400 COG1066 Sms Predicted ATP-depe 66.0 65 0.0014 33.2 10.6 89 191-291 121-228 (456)
401 cd01994 Alpha_ANH_like_IV This 65.6 1.1E+02 0.0024 28.0 11.6 103 159-283 3-118 (194)
402 TIGR03679 arCOG00187 arCOG0018 65.5 93 0.002 29.1 11.2 68 202-283 46-116 (218)
403 COG2515 Acd 1-aminocyclopropan 62.9 55 0.0012 32.1 9.1 116 158-287 65-188 (323)
404 PF01972 SDH_sah: Serine dehyd 62.6 51 0.0011 31.9 8.7 74 232-320 76-152 (285)
405 cd00950 DHDPS Dihydrodipicolin 62.5 15 0.00033 35.9 5.5 52 227-278 14-65 (284)
406 cd00951 KDGDH 5-dehydro-4-deox 61.7 25 0.00053 34.6 6.9 58 227-284 14-74 (289)
407 PRK04147 N-acetylneuraminate l 60.8 12 0.00026 36.9 4.5 59 220-278 10-69 (293)
408 COG0329 DapA Dihydrodipicolina 58.8 17 0.00036 36.0 5.1 57 228-284 19-78 (299)
409 PRK03170 dihydrodipicolinate s 58.7 20 0.00043 35.2 5.7 52 227-278 15-66 (292)
410 PRK03620 5-dehydro-4-deoxygluc 57.4 26 0.00056 34.7 6.2 58 227-284 21-81 (303)
411 smart00642 Aamy Alpha-amylase 54.5 29 0.00063 31.0 5.5 29 260-288 64-92 (166)
412 PF06506 PrpR_N: Propionate ca 54.0 39 0.00084 30.4 6.3 70 190-283 78-147 (176)
413 TIGR03249 KdgD 5-dehydro-4-deo 54.0 28 0.0006 34.3 5.8 52 227-278 19-70 (296)
414 PLN02417 dihydrodipicolinate s 53.6 28 0.0006 34.0 5.7 52 227-278 15-66 (280)
415 PF00701 DHDPS: Dihydrodipicol 53.3 23 0.00049 34.8 5.0 58 227-284 15-75 (289)
416 cd00408 DHDPS-like Dihydrodipi 53.0 22 0.00047 34.7 4.8 57 220-278 6-62 (281)
417 TIGR03573 WbuX N-acetyl sugar 52.6 2.6E+02 0.0056 28.2 13.4 104 158-289 62-170 (343)
418 COG1105 FruK Fructose-1-phosph 52.4 98 0.0021 30.7 9.1 92 193-288 56-168 (310)
419 TIGR00674 dapA dihydrodipicoli 52.3 24 0.00052 34.5 5.0 58 219-278 6-63 (285)
420 TIGR02313 HpaI-NOT-DapA 2,4-di 51.9 32 0.0007 33.9 5.8 55 221-277 10-64 (294)
421 COG0108 RibB 3,4-dihydroxy-2-b 51.1 39 0.00084 31.0 5.6 49 234-283 141-189 (203)
422 KOG0630 Predicted pyridoxal-de 49.2 86 0.0019 32.9 8.2 63 437-502 636-699 (838)
423 TIGR01275 ACC_deam_rel pyridox 48.8 87 0.0019 31.0 8.5 56 158-223 57-113 (311)
424 TIGR00683 nanA N-acetylneurami 48.7 38 0.00082 33.3 5.8 52 227-278 14-66 (290)
425 PRK10638 glutaredoxin 3; Provi 48.4 1E+02 0.0022 23.5 7.1 68 191-271 3-72 (83)
426 cd00952 CHBPH_aldolase Trans-o 47.7 46 0.00099 33.1 6.2 51 228-278 23-73 (309)
427 cd00954 NAL N-Acetylneuraminic 47.4 37 0.00081 33.2 5.5 58 227-284 14-75 (288)
428 COG0367 AsnB Asparagine syntha 46.7 1.9E+02 0.0041 31.3 11.1 127 129-291 211-349 (542)
429 PRK13397 3-deoxy-7-phosphohept 45.5 1.9E+02 0.004 27.8 9.6 84 200-292 110-197 (250)
430 COG3453 Uncharacterized protei 45.2 75 0.0016 26.7 5.9 73 198-280 44-127 (130)
431 COG1748 LYS9 Saccharopine dehy 45.2 1.4E+02 0.0031 30.7 9.3 67 158-243 3-69 (389)
432 COG2870 RfaE ADP-heptose synth 44.9 55 0.0012 33.5 6.1 96 196-300 96-198 (467)
433 TIGR01536 asn_synth_AEB aspara 44.8 3.5E+02 0.0076 28.5 12.8 122 130-286 235-363 (467)
434 PF00926 DHBP_synthase: 3,4-di 44.3 56 0.0012 30.0 5.7 50 233-283 136-185 (194)
435 PF08659 KR: KR domain; Inter 43.9 1.8E+02 0.0039 26.0 9.1 69 191-267 26-99 (181)
436 PRK12595 bifunctional 3-deoxy- 42.7 1.9E+02 0.0042 29.4 9.8 60 231-291 236-299 (360)
437 COG0300 DltE Short-chain dehyd 42.5 3.3E+02 0.0071 26.4 11.3 78 190-275 30-112 (265)
438 COG0296 GlgB 1,4-alpha-glucan 42.3 19 0.00041 39.2 2.7 37 253-289 201-237 (628)
439 cd00953 KDG_aldolase KDG (2-ke 41.7 52 0.0011 32.1 5.5 50 229-278 15-64 (279)
440 TIGR01361 DAHP_synth_Bsub phos 41.3 2.3E+02 0.005 27.3 9.8 82 200-291 120-206 (260)
441 PF03162 Y_phosphatase2: Tyros 41.3 41 0.00088 30.0 4.3 82 192-282 35-119 (164)
442 PRK05872 short chain dehydroge 41.2 2.8E+02 0.0061 26.9 10.8 59 202-266 44-102 (296)
443 TIGR03581 EF_0839 conserved hy 41.2 1.1E+02 0.0024 28.5 7.0 70 202-284 135-207 (236)
444 TIGR00506 ribB 3,4-dihydroxy-2 40.2 74 0.0016 29.4 5.8 50 233-283 141-190 (199)
445 TIGR01274 ACC_deam 1-aminocycl 40.2 1.6E+02 0.0035 29.5 8.9 76 158-246 67-150 (337)
446 TIGR00381 cdhD CO dehydrogenas 39.2 1.6E+02 0.0034 30.1 8.4 64 207-286 183-247 (389)
447 TIGR02026 BchE magnesium-proto 38.9 1.4E+02 0.0031 31.8 8.7 63 217-290 39-103 (497)
448 TIGR02189 GlrX-like_plant Glut 38.1 1.8E+02 0.0038 23.3 7.2 72 190-271 8-81 (99)
449 PRK13396 3-deoxy-7-phosphohept 37.8 2.3E+02 0.0051 28.7 9.4 83 201-292 197-284 (352)
450 TIGR01244 conserved hypothetic 37.6 1.6E+02 0.0035 25.1 7.4 68 205-280 50-126 (135)
451 PF05368 NmrA: NmrA-like famil 37.5 1.7E+02 0.0036 27.2 8.2 76 191-284 24-99 (233)
452 COG1954 GlpP Glycerol-3-phosph 37.0 36 0.00077 30.4 3.0 49 232-291 12-62 (181)
453 COG1184 GCD2 Translation initi 37.0 2.8E+02 0.0061 27.4 9.5 100 157-285 120-227 (301)
454 PF10022 DUF2264: Uncharacteri 36.0 2.5E+02 0.0054 28.6 9.4 125 21-148 2-148 (361)
455 PRK00910 ribB 3,4-dihydroxy-2- 35.3 98 0.0021 29.0 5.8 48 235-283 154-201 (218)
456 PF12818 Tegument_dsDNA: dsDNA 34.3 3.8E+02 0.0082 26.2 10.0 54 232-285 216-273 (282)
457 PRK05876 short chain dehydroge 34.3 4.2E+02 0.0092 25.3 10.7 45 217-266 56-100 (275)
458 COG1936 Predicted nucleotide k 33.7 54 0.0012 29.5 3.7 74 267-340 26-100 (180)
459 PRK00014 ribB 3,4-dihydroxy-2- 33.7 1.1E+02 0.0023 29.0 5.8 47 235-282 158-204 (230)
460 PRK01792 ribB 3,4-dihydroxy-2- 33.4 1.1E+02 0.0023 28.6 5.8 48 234-282 152-199 (214)
461 PF00106 adh_short: short chai 33.3 3E+02 0.0065 23.6 8.7 54 217-275 53-108 (167)
462 PRK10494 hypothetical protein; 33.1 1.4E+02 0.003 28.8 6.8 71 134-225 138-211 (259)
463 PF02603 Hpr_kinase_N: HPr Ser 33.1 48 0.001 28.1 3.3 47 230-284 64-110 (127)
464 cd00886 MogA_MoaB MogA_MoaB fa 32.9 2.1E+02 0.0045 24.9 7.4 63 201-273 22-84 (152)
465 PF03435 Saccharop_dh: Sacchar 32.6 1.9E+02 0.0042 29.4 8.3 53 217-288 47-99 (386)
466 COG0159 TrpA Tryptophan syntha 32.3 3.6E+02 0.0079 26.1 9.3 89 203-312 138-231 (265)
467 PF00128 Alpha-amylase: Alpha 32.2 34 0.00073 33.3 2.5 32 257-288 43-74 (316)
468 PRK03353 ribB 3,4-dihydroxy-2- 32.1 1.2E+02 0.0025 28.5 5.8 50 235-286 153-202 (217)
469 PF05913 DUF871: Bacterial pro 31.5 65 0.0014 32.7 4.4 56 232-287 12-68 (357)
470 PRK11633 cell division protein 31.1 2.1E+02 0.0046 27.0 7.4 49 444-494 163-213 (226)
471 PF12481 DUF3700: Aluminium in 31.1 2.2E+02 0.0048 26.6 7.3 194 53-311 11-218 (228)
472 COG2102 Predicted ATPases of P 30.9 3.8E+02 0.0082 25.2 8.8 101 158-282 3-115 (223)
473 cd00758 MoCF_BD MoCF_BD: molyb 30.7 2.2E+02 0.0048 24.0 7.1 62 200-273 20-81 (133)
474 PRK12481 2-deoxy-D-gluconate 3 30.6 4.6E+02 0.0099 24.6 10.7 44 217-265 56-99 (251)
475 TIGR00177 molyb_syn molybdenum 30.4 2.8E+02 0.0062 23.8 7.8 63 199-273 27-89 (144)
476 PRK08265 short chain dehydroge 30.3 4.7E+02 0.01 24.6 10.4 59 193-260 33-91 (261)
477 PF06415 iPGM_N: BPG-independe 30.3 82 0.0018 29.6 4.5 54 233-286 13-71 (223)
478 PRK09441 cytoplasmic alpha-amy 30.2 38 0.00082 35.9 2.6 30 259-288 74-103 (479)
479 PF14488 DUF4434: Domain of un 30.1 2E+02 0.0043 25.6 6.9 56 230-285 16-84 (166)
480 cd07021 Clp_protease_NfeD_like 30.0 1.6E+02 0.0034 26.7 6.2 76 233-321 15-93 (178)
481 TIGR00290 MJ0570_dom MJ0570-re 29.9 4.8E+02 0.01 24.6 9.6 100 159-283 4-115 (223)
482 CHL00073 chlN photochlorophyll 29.8 94 0.002 32.7 5.3 51 232-284 81-133 (457)
483 PF01301 Glyco_hydro_35: Glyco 29.4 1.1E+02 0.0023 30.7 5.5 21 265-285 62-82 (319)
484 TIGR00334 5S_RNA_mat_M5 ribonu 29.4 58 0.0013 29.3 3.2 53 229-292 10-62 (174)
485 PF03599 CdhD: CO dehydrogenas 29.4 1E+02 0.0022 31.6 5.3 72 232-316 107-178 (386)
486 smart00852 MoCF_biosynth Proba 29.1 2.8E+02 0.006 23.4 7.4 62 199-272 18-79 (135)
487 PRK08643 acetoin reductase; Va 29.1 4.8E+02 0.01 24.3 10.0 44 217-265 52-95 (256)
488 PLN02331 phosphoribosylglycina 28.9 3.7E+02 0.0081 24.9 8.6 67 167-242 10-76 (207)
489 PF02638 DUF187: Glycosyl hydr 28.6 1.3E+02 0.0028 29.9 5.9 19 265-283 69-87 (311)
490 PRK06139 short chain dehydroge 28.3 5.6E+02 0.012 25.5 10.6 46 217-267 57-102 (330)
491 PRK05650 short chain dehydroge 28.0 4.5E+02 0.0097 24.9 9.6 46 217-267 50-95 (270)
492 PRK08263 short chain dehydroge 27.0 5.5E+02 0.012 24.3 10.5 45 217-266 50-94 (275)
493 PF06620 DUF1150: Protein of u 27.0 1.9E+02 0.0042 22.1 5.2 63 211-281 9-71 (76)
494 PRK08329 threonine synthase; V 26.4 6.2E+02 0.013 25.4 10.5 53 158-223 106-158 (347)
495 PF01645 Glu_synthase: Conserv 26.4 4.3E+02 0.0094 27.0 9.2 79 204-291 160-240 (368)
496 TIGR02402 trehalose_TreZ malto 26.3 48 0.001 35.8 2.6 33 257-289 151-183 (542)
497 KOG2741 Dimeric dihydrodiol de 26.2 4E+02 0.0087 26.9 8.6 15 265-279 109-123 (351)
498 COG1606 ATP-utilizing enzymes 25.3 1.1E+02 0.0023 29.4 4.3 98 158-289 20-123 (269)
499 KOG1394 3-oxoacyl-(acyl-carrie 25.0 7.5E+02 0.016 25.2 10.7 85 193-282 261-353 (440)
500 PRK06114 short chain dehydroge 24.9 5.7E+02 0.012 23.8 11.0 42 217-263 59-100 (254)
No 1
>PLN02590 probable tyrosine decarboxylase
Probab=100.00 E-value=4.4e-97 Score=772.54 Aligned_cols=477 Identities=56% Similarity=1.028 Sum_probs=445.7
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHhcCC----CCCCCCCChhHHhhhCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCC
Q 048643 16 VINPLDPEEFRRQAHMVIDFIADYYKNVDK----YPVRSQVEPGYLRKRLPECAPYNPESMETILQDVQEHIVPGVTHWQ 91 (506)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~p~~~~~~p~~l~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~ 91 (506)
.+.+||+++||+++++++|.+++|++++.+ +||.+.++|+++++.++.++|++|++++++++++.+.+.++..+|+
T Consensus 50 ~~~~m~~~~~r~~~~~~~d~i~~~~~~~~~~~~~~pv~~~~~p~~l~~~l~~~~P~~g~~~~~il~~~~~~i~p~~~~~~ 129 (539)
T PLN02590 50 KMKPMDSELLREQGHIMVDFIADYYKNLQDSPQDFPVLSQVQPGYLRDMLPDSAPERPESLKELLDDVSKKIMPGITHWQ 129 (539)
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHhhccccccCCCCCCCCChHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhccCCcCC
Confidence 356699999999999999999999999887 7999999999999999999999999999999999999999999999
Q ss_pred CCCccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHH
Q 048643 92 SPNYFAYFPSSGSIAGFLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILC 171 (506)
Q Consensus 92 ~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~ 171 (506)
||+||||++++++++++++|++++++|++++.|..+|+++++|+++++|+++++|+|+.+...+.++|+||+|||+||++
T Consensus 130 hP~f~a~~~~~~~~~~~lgd~l~sa~n~~~~~~~~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~ 209 (539)
T PLN02590 130 SPSYFAYYASSTSVAGFLGEMLNAGLSVVGFTWLTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLV 209 (539)
T ss_pred CCCeeEeccCCCcHHHHHHHHHHHhcccccCCcccCchhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999986532234689999999999999
Q ss_pred HHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccE
Q 048643 172 TLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPL 251 (506)
Q Consensus 172 al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~ 251 (506)
||.+||++..++.+..+.++.+||+|+++|+|+.|+++++|+|.++++.||+|..++++||+++|+++|++++++|.+|+
T Consensus 210 al~aAR~~~~~~~g~~~~~~~vvy~S~~aH~Sv~KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~ 289 (539)
T PLN02590 210 VVLAARDRILKKVGKTLLPQLVVYGSDQTHSSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPF 289 (539)
T ss_pred HHHHHHHHHHhhhcccCCCCEEEEecCCchHHHHHHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcE
Confidence 99999998877666666788999999999999999999999999999999998655689999999999999999999999
Q ss_pred EEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEe
Q 048643 252 FLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVK 331 (506)
Q Consensus 252 ~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r 331 (506)
+||+|+|||.+|+||||++|+++|++||+||||||||||++++++++++++.|+++||||++|+||||++|++||++++|
T Consensus 290 ~VvaTaGTT~tGaiDpl~~Ia~i~~~~g~WlHVDaA~GG~al~~~~~r~~~~Gie~ADSit~D~HK~l~~p~~cg~llvr 369 (539)
T PLN02590 290 FICATVGTTSSAAVDPLVPLGNIAKKYGIWLHVDAAYAGNACICPEYRKFIDGIENADSFNMNAHKWLFANQTCSPLWVK 369 (539)
T ss_pred EEEEEeCCCCCcccCCHHHHHHHHHHhCCeEEEecchhhhhhcChhhHHHhcCCccCCEEEECchhhcCcCcCEEEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CchhHHhhhcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCC
Q 048643 332 DPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKR 411 (506)
Q Consensus 332 ~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~ 411 (506)
++..+.+++...++|+..........+++.+|++++|||++++++|++|+.+|.+||++++++++++|++|.+.|++.|+
T Consensus 370 ~~~~l~~a~~~~~~YL~~~~~~~~~~~d~~d~~i~lsRr~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~ 449 (539)
T PLN02590 370 DRYSLIDALKTNPEYLEFKVSKKDTVVNYKDWQISLSRRFRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPS 449 (539)
T ss_pred CHHHHHHHhhcCHHHhCCcccccccCCCccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 99888889999999996543333456789999999999999999999999999999999999999999999999999999
Q ss_pred Cc----c--ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHH
Q 048643 412 VS----P--SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVM 485 (506)
Q Consensus 412 ~~----p--~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~ 485 (506)
|+ | ++||||+.|.. .+.+..+++|++|+++|+++|.++++++.++|+.+||+|++|+.|+++||+
T Consensus 450 fel~~~~~l~iVcFr~~~~~---------~~~~~~~~ln~~l~~~l~~~G~~~vs~t~~~g~~~lR~~i~n~~T~~~dv~ 520 (539)
T PLN02590 450 FEVVTTRYFSLVCFRLAPVD---------GDEDQCNERNRELLAAVNSTGKIFISHTALSGKFVLRFAVGAPLTEEKHVT 520 (539)
T ss_pred eEEecCCceEEEEEEecCCC---------CCHHHHHHHHHHHHHHHHhCCCEEEEeeEECCEEEEEEEecCCCCCHHHHH
Confidence 99 4 99999998752 134556889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHcc
Q 048643 486 VAWTMVQEQLEAFLTT 501 (506)
Q Consensus 486 ~li~~l~~~~~~l~~~ 501 (506)
.+++.|.+.++++.+.
T Consensus 521 ~~~~~i~~~a~~~~~~ 536 (539)
T PLN02590 521 EAWQIIQKHASKFTRN 536 (539)
T ss_pred HHHHHHHHHHHHhccc
Confidence 9999999999988764
No 2
>PLN02880 tyrosine decarboxylase
Probab=100.00 E-value=3e-91 Score=729.71 Aligned_cols=476 Identities=60% Similarity=1.061 Sum_probs=443.5
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHHhhhCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcc
Q 048643 17 INPLDPEEFRRQAHMVIDFIADYYKNVDKYPVRSQVEPGYLRKRLPECAPYNPESMETILQDVQEHIVPGVTHWQSPNYF 96 (506)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~~l~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~ 96 (506)
+..||+++||++++++++.+.+|+++++++||.|...|+++++.++..+|++|.+++++++++.+.+.++..+|+||+||
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~~~~~p~~l~~~~~~~~p~~~~~~~~~l~~~~~~i~~~~~~~~hP~f~ 86 (490)
T PLN02880 7 LRPMDAEQLRECGHRMVDFIADYYKSIENFPVLSQVQPGYLRELLPDSAPNQPETLDQVLDDVQAKILPGVTHWQSPNYF 86 (490)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhccccCCCCCCCCHHHHHHhccccCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCee
Confidence 34599999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHH
Q 048643 97 AYFPSSGSIAGFLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAA 176 (506)
Q Consensus 97 ~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~a 176 (506)
||++++++++++++|++++.+|+++..|..+|.++++|+++++|+++++|+|+.+...+.++|++|+|||+||++||.+|
T Consensus 87 ~~~~~~~~~~~~lad~l~~~~n~~~~~~~~sp~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~A 166 (490)
T PLN02880 87 AYYPSNSSVAGFLGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAA 166 (490)
T ss_pred EeccCCCcHHHHHHHHHHHhhccCCcccccCcccHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998753333468999999999999999999
Q ss_pred HHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEe
Q 048643 177 RDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCAT 256 (506)
Q Consensus 177 r~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t 256 (506)
|++.+++.+..+.++.+||+|+++|+|+.|+++++|+|.++++.||+|.+++++||+++|+++|++++++|.+|++||+|
T Consensus 167 R~~~~~~~g~~~~~~~vv~~S~~aH~Sv~Kaa~~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvat 246 (490)
T PLN02880 167 RDRVLRKVGKNALEKLVVYASDQTHSALQKACQIAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCAT 246 (490)
T ss_pred HHHHHHHhcccccCCeEEEEcCCchHHHHHHHHHcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEe
Confidence 99988777776678899999999999999999999999999999999865578999999999999999999999999999
Q ss_pred ccCCCCCcccChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhH
Q 048643 257 IGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSAL 336 (506)
Q Consensus 257 ~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l 336 (506)
+|||.+|++|||++|+++|++||+|+||||||||++++++++++++.|+++|||+++|+|||+++|++||++++|++..+
T Consensus 247 aGTT~~GaiDpl~eI~~i~~~~~iwlHVDaA~gg~~~~~~~~~~~l~gie~aDSit~d~HKwl~~P~~~g~llvr~~~~l 326 (490)
T PLN02880 247 VGTTSSTAVDPLLELGKIAKSNGMWFHVDAAYAGSACICPEYRHYIDGVEEADSFNMNAHKWFLTNFDCSLLWVKDRNAL 326 (490)
T ss_pred cCCCcCcccCcHHHHHHHHHHcCCEEEEehhhHHHHHhCHHHHHHhcCchhcCEEEECchhhcCCCccEEEEEEeCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998887
Q ss_pred HhhhcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc---
Q 048643 337 VSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS--- 413 (506)
Q Consensus 337 ~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~--- 413 (506)
...+...++|+...........++.++++++|||++++++|++|+.+|.+|+++++++++++|+++.+.|++.|+|+
T Consensus 327 ~~~~~~~~~Yl~~~~~~~~~~~~~~~~~i~~~rr~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~ 406 (490)
T PLN02880 327 IQSLSTNPEFLKNKASQANSVVDYKDWQIPLGRRFRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVT 406 (490)
T ss_pred HHHHccCHHHhcCccccccCCCChhccCcCCCCcccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEec
Confidence 78888899999764333344578889999999999999999999999999999999999999999999999999998
Q ss_pred -c--ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHH
Q 048643 414 -P--SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTM 490 (506)
Q Consensus 414 -p--~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~ 490 (506)
| ++||||+.+.. .+.+..+++|++++++|+++|.++++.+.++|+.++|+|++||+|+++||+.+++.
T Consensus 407 ~~~~~iv~Fr~~~~~---------~~~~~~~~~n~~l~~~l~~~g~~~v~~t~~~g~~~lR~~~~n~~tt~~di~~~~~~ 477 (490)
T PLN02880 407 PRIFSLVCFRLVPPK---------NNEDNGNKLNHDLLDAVNSSGKIFISHTVLSGKYVLRFAVGAPLTEERHVTAAWKV 477 (490)
T ss_pred CCceEEEEEEEeCCC---------CChhhHHHHHHHHHHHHHhCCCEEEEEEEECCEEEEEEEecCCCCCHHHHHHHHHH
Confidence 3 99999998642 23456688999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcc
Q 048643 491 VQEQLEAFLTT 501 (506)
Q Consensus 491 l~~~~~~l~~~ 501 (506)
|.++++++...
T Consensus 478 i~~~~~~~~~~ 488 (490)
T PLN02880 478 LQDEASKLLGK 488 (490)
T ss_pred HHHHHHHHHHh
Confidence 99999988654
No 3
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=100.00 E-value=4.5e-90 Score=670.00 Aligned_cols=457 Identities=48% Similarity=0.866 Sum_probs=437.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHHhhhCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCccccC
Q 048643 20 LDPEEFRRQAHMVIDFIADYYKNVDKYPVRSQVEPGYLRKRLPECAPYNPESMETILQDVQEHIVPGVTHWQSPNYFAYF 99 (506)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~~l~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~ 99 (506)
||.++||+.+++|||+|+||+++++++||.|+++|+++++++|.+.|+.|+++++|++++++.++||.+||+||+|++|+
T Consensus 1 Md~~efR~~gk~mVD~IadY~e~ir~r~v~P~v~PGYl~~llP~~aPe~pE~~~~Il~D~ekiI~PGitHw~hP~fhAyf 80 (511)
T KOG0628|consen 1 MDSEEFREEGKEMVDYIADYLENIRKRRVLPDVKPGYLRDLLPSKAPEKPESWEDILGDLEKIIMPGITHWQHPHFHAYF 80 (511)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCcchhhhhCCCCCCCChhhHHHHHHHHHHHccCCCcccCCCceeeEc
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCcccc--CCCCcEEEcCCchHHHHHHHHHHH
Q 048643 100 PSSGSIAGFLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLF--SGNGGGVIQGTTCEAILCTLTAAR 177 (506)
Q Consensus 100 ~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~--~~~~~g~~t~ggt~a~l~al~~ar 177 (506)
|++.+++++++|+++..++..+++|..+|+.++||..+++|+++++++|..|.. .+.|+|++++++|++++.++.+||
T Consensus 81 pa~~s~~siladmLs~~i~~vGFtW~ssPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR 160 (511)
T KOG0628|consen 81 PAGNSYPSILADMLSGGIGCVGFTWASSPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAAR 160 (511)
T ss_pred cCccchHHHHHHHHhcccccccceeecCcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999864 458899999999999999999999
Q ss_pred HHHHHhhccc--------CCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCc
Q 048643 178 DRVLNKIGRE--------NISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLV 249 (506)
Q Consensus 178 ~~~~~~~~~~--------~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~ 249 (506)
..++++.+.. -..+.++|+|+++|.|++|+|.+.|+ +++.+|+|. ++.|+.+.|+++|++|.++|.+
T Consensus 161 ~~~i~~~k~~~p~~~e~~~~~~lV~Y~SDqahssveka~~i~~V---klR~l~td~--n~~mr~~~L~~AIe~D~arGlI 235 (511)
T KOG0628|consen 161 TEKIEEIKSRPPELHESSVLARLVAYCSDQAHSSVEKACLIAGV---KLRALPTDE--NFGMRGDTLRKAIEEDIARGLI 235 (511)
T ss_pred HHHHHHhhcCCCcccchhhhhhheEEecCcccchHHHhHhhcce---eEEEeeccc--CcCCCHHHHHHHHHHHHhCCCc
Confidence 9988775432 13689999999999999999999999 999999986 7899999999999999999999
Q ss_pred cEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEE
Q 048643 250 PLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLW 329 (506)
Q Consensus 250 p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~ 329 (506)
||+|++|.|||.++++|+|.+|..+|+++|+||||||||+|.+..||+++.++.|++.|||+.+++|||+.+-++|+.+|
T Consensus 236 Pf~v~at~GTT~~ca~D~l~elg~Vc~~~glWLHVDAAYAGsa~iCpE~r~l~rGie~aDSfn~n~hK~~~vnfDCs~lW 315 (511)
T KOG0628|consen 236 PFFVCATLGTTSSCAFDELEELGPVCREEGLWLHVDAAYAGSAFICPEFRYLMRGIEYADSFNFNPHKWLLVNFDCSPLW 315 (511)
T ss_pred cEEEEEeecCccccccccHHHhcchhhhcCEEEEeehhhccccccCHHHHHHhhcchhhccccCChhheeEEeeeeecce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCchhHHhhhcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcC
Q 048643 330 VKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASD 409 (506)
Q Consensus 330 ~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~ 409 (506)
+|++..+.++++.++-||.+.... ...+|..|.+..+|||+++|+|+.+|.+|.+++++.++++.++|+.|.+.+.+.
T Consensus 316 vkd~~~~~~~~~vdp~yL~h~~~~--~~~Dyrhwqipl~rRfRSLKlWfv~R~~Gve~lq~~iR~h~~La~~fe~lv~~d 393 (511)
T KOG0628|consen 316 VKDGTKLSRAFNVDPLYLKHAYQG--SAPDYRHWQIPLGRRFRSLKLWFVLRSYGVENLQNYIREHVRLAKEFETLVRAD 393 (511)
T ss_pred eecCceeeeeeecChHhhcchhhc--cCCCccccccccccchhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 999988888999999999987654 378999999999999999999999999999999999999999999999999999
Q ss_pred CCCc---c---ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHH
Q 048643 410 KRVS---P---SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERH 483 (506)
Q Consensus 410 ~~~~---p---~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~ed 483 (506)
+.|| | +.||||.++. |+.|++|+++++.+|.+++.+..+.|+.+||++++++.|+++|
T Consensus 394 ~~FE~~~~~~lgLvcFRlk~~----------------N~~ne~Ll~~in~~g~i~l~~~~l~gk~vlRf~V~s~~t~~~d 457 (511)
T KOG0628|consen 394 PRFEIVNKRILGLVCFRLKGD----------------NEINEALLNRLNSSGRIHLVPASLHGKFVLRFAVCSPLTNESD 457 (511)
T ss_pred CcceeecccccceeEEeecCC----------------cHHHHHHHHHHHhcCcEEEEEeeecceEEEEEEecCCCCcHHH
Confidence 9999 4 9999999886 7899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHH
Q 048643 484 VMVAWTMVQEQLEAFL 499 (506)
Q Consensus 484 i~~li~~l~~~~~~l~ 499 (506)
|+..++.|.+.+..+.
T Consensus 458 i~~a~~~I~~~a~~l~ 473 (511)
T KOG0628|consen 458 IDEAWKIIFEAADELF 473 (511)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999998853
No 4
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=100.00 E-value=2.2e-74 Score=603.29 Aligned_cols=456 Identities=22% Similarity=0.311 Sum_probs=384.1
Q ss_pred HHHHHHHHHHHHHHHHHHHh--cCCCCCCCCCChhHHhhhCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCccccCC
Q 048643 23 EEFRRQAHMVIDFIADYYKN--VDKYPVRSQVEPGYLRKRLPECAPYNPESMETILQDVQEHIVPGVTHWQSPNYFAYFP 100 (506)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~--~~~~p~~~~~~p~~l~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~ 100 (506)
..+..+.+++.+.+++|+.+ ....|+.+.+.++.. ...+|++|.+.+++++++.+.+.++.++|+||+||||++
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~hP~f~g~~~ 97 (522)
T TIGR03799 22 STLGRIEQKISQNLAGFLQEHIVAIEKPLSEIEKDFS----SAEIPEQPTFVSEHTQFLLDKLVAHSVHTASPSFIGHMT 97 (522)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhccCCCchhhhhccc----ccCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCeEEecc
Confidence 45666666666666666665 333455555443332 457899999999999999999999999999999999999
Q ss_pred CC-CCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCC-CCcc-----ccCCCCcEEEcCCchHHHHHHH
Q 048643 101 SS-GSIAGFLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKL-PKSF-----LFSGNGGGVIQGTTCEAILCTL 173 (506)
Q Consensus 101 ~~-~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~-~~~~-----~~~~~~~g~~t~ggt~a~l~al 173 (506)
++ +.....+++ +.+.+|+|...|+.||+++++|+++++|++++++. ++.+ ...+.++|++|+|||+||++||
T Consensus 98 ~~~p~~~~~l~~-l~~~lN~n~~~~~~spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al 176 (522)
T TIGR03799 98 SALPYFMLPLSK-LMVALNQNLVKIETSKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITAL 176 (522)
T ss_pred CCCchHHHHHHH-HHHHhcCCcceeecCcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHH
Confidence 86 444445777 67789999999999999999999999999999963 2222 1112358999999999999999
Q ss_pred HHHHHHHHHhhcc------c---------CCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHH
Q 048643 174 TAARDRVLNKIGR------E---------NISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLT 238 (506)
Q Consensus 174 ~~ar~~~~~~~~~------~---------~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~ 238 (506)
++||+++++..+. + +.++.+||+|+.+|+|+.|+++++|+|..+++.||+|. +|+||+++|++
T Consensus 177 ~~AR~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~v~~S~~~H~S~~kaa~~lglg~~~v~~vp~d~--~g~~d~~~L~~ 254 (522)
T TIGR03799 177 WVARNRLLKADGDFKGVAREGLFAALKHYGYDGLAILVSERGHYSLGKAADVLGIGRDNLIAIKTDA--NNRIDVDALRD 254 (522)
T ss_pred HHHHHHhccccccccccccccchhhhhhccCCceEEEECCCchHHHHHHHHHcCCCcccEEEEEeCC--CCcCCHHHHHH
Confidence 9999987653211 1 23578999999999999999999999999999999985 57999999999
Q ss_pred HHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccc
Q 048643 239 QINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKW 318 (506)
Q Consensus 239 ~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~ 318 (506)
+|+++.++|.+|++|++++|||.+|++|||++|+++|++||+|+||||||||+.++++++++++.|++++||+++|+|||
T Consensus 255 ~i~~~~~~g~~~~~vvataGtt~tGaiDpl~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gle~aDSit~d~HK~ 334 (522)
T TIGR03799 255 KCAELAEQNIKPLAIVGVAGTTETGNIDPLDEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGIERADSVTIDAHKQ 334 (522)
T ss_pred HHHHHHHCCCCcEEEEEEecCcCCCCcCCHHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcCchhCCEEEEChhhc
Confidence 99999889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHH
Q 048643 319 FFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNM 398 (506)
Q Consensus 319 l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~ 398 (506)
+++|++||++++|++..+ +.+...++|+.... ..++.++++++||+++++++|++|+.+|.+|+++++++++++
T Consensus 335 l~~P~g~G~llvr~~~~~-~~~~~~~~Yl~~~~-----~~d~~~~~legsR~~~al~lw~aL~~lG~~G~~~ii~~~~~l 408 (522)
T TIGR03799 335 LYVPMGAGMVLFKDPALM-SAIEHHAEYILRKG-----SKDLGSHTLEGSRPGMAMLVYAGLHIIGRKGYELLIDQSIEK 408 (522)
T ss_pred CCcCcccEEEEEeCHHHH-HHhccCcchhcCCC-----CCccccceeecCcchHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 999999999999998654 56777889985421 245678899999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCc----c--ceEEEeecCCCccccc-----ccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeEC--
Q 048643 399 AKLFERLVASDKRVS----P--SAVMDKLKPKYENCHS-----QQLVTEEEAINEFNRELLESINASGKAYMTHAVCG-- 465 (506)
Q Consensus 399 a~~l~~~l~~~~~~~----p--~~v~f~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~-- 465 (506)
+++|.+.|++.|+|+ | ++||||+.|...+... ++.....+..+++|+++.++++++|.+|++++.++
T Consensus 409 a~~l~~~L~~~~~~el~~~p~l~iv~Fr~~p~~~~~~l~~~~~~~~~~~~~~~~~ln~~i~~~~~~~G~~~vs~t~l~~~ 488 (522)
T TIGR03799 409 AKYFADLIQQQPDFELVTEPELCLLTYRYVPEEVQQALAKADEEQREKINELLDRLTKFIQKRQREAGKSFVSRTRLTPA 488 (522)
T ss_pred HHHHHHHHhhCCCeEEecCCCccEEEEEEeChhhcccccccchhhhhhHHHHHHHHHHHHHHHHHhcCCEEEEEEEeccc
Confidence 999999999999999 4 9999999876432210 01111234568899999999999999999998876
Q ss_pred -----CEEEEEEEecCCCCCHHHHHHHHHHH
Q 048643 466 -----GIYAMRFAVGATLTEERHVMVAWTMV 491 (506)
Q Consensus 466 -----g~~~lR~~~~~~~tt~edi~~li~~l 491 (506)
+..+||+|++||.|+++||+.+++.=
T Consensus 489 ~~~g~~~~~lR~~~~np~tt~~~i~~~l~~~ 519 (522)
T TIGR03799 489 QYDHQPTVVFRVVLANPLTTHEILQDILDEQ 519 (522)
T ss_pred ccCCCCcEEEEEEecCCCCCHHHHHHHHHHh
Confidence 45789999999999999999988653
No 5
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=100.00 E-value=4.5e-75 Score=589.09 Aligned_cols=364 Identities=40% Similarity=0.718 Sum_probs=327.1
Q ss_pred hhHHhhhCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHH
Q 048643 54 PGYLRKRLPECAPYNPESMETILQDVQEHIVPGVTHWQSPNYFAYFPSSGSIAGFLGEMLSSGFNVVGFNWISSPAATEL 133 (506)
Q Consensus 54 p~~l~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~l 133 (506)
|++|++.++..+|++|.++++|++++.+.+.++..+|+||+|+||+++++++++++++++++.+|+|...|+.+|.++++
T Consensus 1 P~~l~~~~~~~lp~~~~~~~~vl~~~~~~l~~~~~~~~~P~~~~~~~~~~~~~~i~~~~l~~~~n~n~~~~~~~P~~~~~ 80 (373)
T PF00282_consen 1 PGELRARLDEELPEEGESLEEVLKDLREILAPGVTHWHHPRFFGFVPGGPSPASILADLLASALNQNGFTWEASPAATEI 80 (373)
T ss_dssp TTSSGGGCHCCHHSSHH-HHHHHHHHHHHTHGCS-TTTSTTBESSSHT--CHHHHHHHHHHHHHT-BTTSTTTSHHHHHH
T ss_pred ChhhhhcCccccccCCCCHHHHHHHHHHHhhccCCCCCChhHhhhccCCccHHHHHHHHHHhhhcccccccccccccccc
Confidence 78899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccC---CCCeEEEeCCCCchHHHHHHHH
Q 048643 134 ENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGREN---ISKLVVYGSDQTHCALQKAAQI 210 (506)
Q Consensus 134 E~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~---~~~~~v~~s~~~H~s~~ka~~~ 210 (506)
|+++++|+++++|+|.++...+.++|++|+|||+||++|+++||+++.++.+..+ .++++||+|+.+|||+.|+|++
T Consensus 81 E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S~~Kaa~~ 160 (373)
T PF00282_consen 81 EREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYSIEKAARI 160 (373)
T ss_dssp HHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-THHHHHHHH
T ss_pred hHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccHHHHhcce
Confidence 9999999999999997654333468999999999999999999999887665555 4689999999999999999999
Q ss_pred hCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeeccccc
Q 048643 211 VGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAG 290 (506)
Q Consensus 211 ~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg 290 (506)
+|+ .++.||+++ +++||+++|+++|+++.++|..|++||+|+|||.+|++||+++|+++|++|++|+||||||||
T Consensus 161 lGl---g~~~I~~~~--~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~~~~wlHVDaA~gg 235 (373)
T PF00282_consen 161 LGL---GVRKIPTDE--DGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIADICEKYNIWLHVDAAYGG 235 (373)
T ss_dssp TTS---EEEEE-BBT--TSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHHHHCT-EEEEEETTGG
T ss_pred eee---EEEEecCCc--chhhhHHHhhhhhcccccccccceeeeccCCCcccccccCHHHHhhhccccceeeeecccccc
Confidence 999 599999996 579999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCccccCCCC
Q 048643 291 SACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRR 370 (506)
Q Consensus 291 ~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~ 370 (506)
+++++|+++++..|+++||||++|+||||++|++||++++|++..+...+...+.|+.+...+.+...++.++++++||+
T Consensus 236 ~~~~~~~~~~~~~gi~~adSit~d~HK~l~~P~~~~~~l~r~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~tl~~SR~ 315 (373)
T PF00282_consen 236 SALLSPEYRHLLFGIERADSITIDPHKWLGVPYGCGVLLVRDKSDLRDAFSINADYLGNDDRESDESYDYGDYTLQGSRR 315 (373)
T ss_dssp GGGGHCTTGGGGTTGGGESEEEEETTTTTS-SSS-EEEEESSGGGHHGGGEEEETCTT-S-SSS-GGGCEEEGSSSSSGH
T ss_pred cccccccccccccccccccccccchhhhhcCCccceeEEeecccchHHHhccChhhhccccccccccccccccccccccc
Confidence 99999999999999999999999999999999999999999999888888888999986554445567888999999999
Q ss_pred CCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc----c--ceEEEeec
Q 048643 371 FRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS----P--SAVMDKLK 422 (506)
Q Consensus 371 ~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~----p--~~v~f~~~ 422 (506)
++++++|++|+.+|.+|+++++++++++|++|++.|++.++|+ | ++||||++
T Consensus 316 ~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~~~~~~~vcFr~k 373 (373)
T PF00282_consen 316 FRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFELVNEPDLNIVCFRYK 373 (373)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSTTSSSEEEEEES
T ss_pred chHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEcCCCceEEEEEeC
Confidence 9999999999999999999999999999999999999999998 4 99999985
No 6
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=100.00 E-value=2.2e-74 Score=554.11 Aligned_cols=486 Identities=21% Similarity=0.315 Sum_probs=431.8
Q ss_pred CCCCCCCCCCCC------CCCCCCC-CHHHHHHHHHHHHHHHHHHHHhcCC--CCCCCCCChhHHhhhCCCCCCCCCCCH
Q 048643 2 GSLTSDQLDGNS------GLVINPL-DPEEFRRQAHMVIDFIADYYKNVDK--YPVRSQVEPGYLRKRLPECAPYNPESM 72 (506)
Q Consensus 2 ~~~~~~~~~~~~------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~p~~~~~~p~~l~~~~~~~~p~~~~~~ 72 (506)
+|..+||.+.+. ....... ..+..+.++.++++.+.+|...-.+ ..|.+...|++|+..++.++|+++.+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~D~L~~~~~~~~~te~fl~~v~~~ll~~v~~~~dr~~kv~~fhhP~~L~~l~nlel~~~~esl 82 (510)
T KOG0629|consen 3 GSAAADQTDTNATNLEARDLLPDDVAGEEVTEPFLRAVVDILLDYVKKGFDRSQKVLDFHHPDELKELFNLELRDQPESL 82 (510)
T ss_pred cccccccccchhhhhHhhhccccccCCchhhHhhhHHHHHHHHHhhccCCcccceeecccChHHHHHHhCcccCCChhhH
Confidence 345666666651 1111222 3444588899999999999665443 468899999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccc
Q 048643 73 ETILQDVQEHIVPGVTHWQSPNYFAYFPSSGSIAGFLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFL 152 (506)
Q Consensus 73 ~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~ 152 (506)
++|+++.++.+. ..+...|||||+.+.++..+.++.++++++..|.|.+.|+.+|++..+|.++...+.++.|++..
T Consensus 83 ~qil~~cr~tl~-y~vKTgHprffNQl~~glD~~~Lag~wlT~t~Ntn~~TYEiAPvF~lmE~~vl~km~~ivGw~~~-- 159 (510)
T KOG0629|consen 83 AQILEDCRDTLK-YSVKTGHPRFFNQLSSGLDPIGLAGEWLTSTANTNMFTYEIAPVFVLMEEEVLAKMREIVGWEEG-- 159 (510)
T ss_pred HHHHHHHHHHHH-hhhccCCCcchhhhccCCCHHHHHHHHHHhccCCCCceEEecceEEeehHHHHHHHHHHhCCCCC--
Confidence 999999999775 44566899999999999999999999999999999999999999999999999999999999975
Q ss_pred cCCCCcEEEcCCchHHHHHHHHHHHHHHHHh---hcccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCc
Q 048643 153 FSGNGGGVIQGTTCEAILCTLTAARDRVLNK---IGRENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSY 229 (506)
Q Consensus 153 ~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~---~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~ 229 (506)
++|+|.+||+.+|++|+.+||.+.+++ .|..+.|..++|+|+++|||+.|+|+++|+|+++|+.|++++ .|
T Consensus 160 ----~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~kaAa~lg~gtd~c~~v~t~e--~G 233 (510)
T KOG0629|consen 160 ----GDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSIKKAAAFLGLGTDHCIKVKTDE--RG 233 (510)
T ss_pred ----CCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhhHHHHHHHhccCCceeEEecccc--cC
Confidence 389999999999999999999987765 355567999999999999999999999999999999999986 57
Q ss_pred ccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCC
Q 048643 230 GLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGAD 309 (506)
Q Consensus 230 ~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aD 309 (506)
.|++++||++|.++.++|..||+|.+|+|||..|++|||+.|+++|++|++|+||||||||+++++..+|+++.|+++||
T Consensus 234 km~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDdL~~iadiC~k~~lWmHvDAAwGGglLmS~k~R~kl~Giera~ 313 (510)
T KOG0629|consen 234 KMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDDLNGIADICEKHKLWMHVDAAWGGGLLMSRKHRHKLTGIERAN 313 (510)
T ss_pred ccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCcHHHHHHHHHhcCEEEEeecccccccccChhhHhhccCccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHH
Q 048643 310 SFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLR 389 (506)
Q Consensus 310 si~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~ 389 (506)
|++++|||++++|..||.+++|....+.+..+..+.|+++........+|.++..++|+|+.+.+|+|+.|++-|..|++
T Consensus 314 SvtwnpHK~~gaplqCsa~l~r~~gll~~Cn~~~A~YLFq~dK~YdvS~DTgdK~iQCGRh~D~FKlWlmwkaKG~~Gfe 393 (510)
T KOG0629|consen 314 SVTWNPHKLMGAPLQCSAFLTREEGLLQRCNQMSAIYLFQQDKFYDVSYDTGDKAIQCGRHVDVFKLWLMWKAKGTQGFE 393 (510)
T ss_pred ceeecHHHhhcCcchhhHHHHHHHHHHHhhcccchhhhhccCceeecccccccchhhcCccccHHHHHHHHHhcccccHH
Confidence 99999999999999999999999998888888999999987655566788899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCc------c--ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEee
Q 048643 390 HFLRSHVNMAKLFERLVASDKRVS------P--SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTH 461 (506)
Q Consensus 390 ~~i~~~~~~a~~l~~~l~~~~~~~------p--~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~ 461 (506)
+.++++.++|+||.++|++.++++ | ..|||++.|+..|.+++... ...+...+.-.+..++.++|...++.
T Consensus 394 ~~v~k~~~lA~yl~~~lrer~~~~~l~~~~pe~~nv~fw~vp~~lR~~~~~~e-~~~rL~kVaPkIK~~Mm~~Gt~Mi~Y 472 (510)
T KOG0629|consen 394 AQVDKCLRLAEYLYDRLREREGFEMLFELEPEHVNVCFWYVPPSLRGWQENPE-RDSRLVKVAPKIKERMMKKGTTMIGY 472 (510)
T ss_pred HHHHHHHHHHHHHHHHHHhcccceehhcCCCceEEEeeccCchHhccCcccch-hhhHHHhhCcHHHHHHHhccceeeEe
Confidence 999999999999999999998877 5 78999999988777655422 23344556678899999999999998
Q ss_pred eeECC-EEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 048643 462 AVCGG-IYAMRFAVGATLTEERHVMVAWTMVQEQLEA 497 (506)
Q Consensus 462 ~~~~g-~~~lR~~~~~~~tt~edi~~li~~l~~~~~~ 497 (506)
.+... ..++|+.+.|+..+++|+|-+++.|+++++.
T Consensus 473 qPl~~~~nffr~v~sn~a~~~ad~dflldEIerlgq~ 509 (510)
T KOG0629|consen 473 QPLGDKPNFFRMVISNPALTEADLDFLLDEIERLGQD 509 (510)
T ss_pred cccccccchhheecccchhhhhhHHHHHHHHHHhccC
Confidence 87643 5689999999999999999999999998764
No 7
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=100.00 E-value=2.4e-69 Score=568.77 Aligned_cols=456 Identities=17% Similarity=0.237 Sum_probs=381.1
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCC-CCCChhHHhhhCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCC-Cc
Q 048643 18 NPLDPEEFRRQAHMVIDFIADYYKNVDKYPVR-SQVEPGYLRKRLPECAPYNPESMETILQDVQEHIVPGVTHWQSP-NY 95 (506)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~p~~l~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p-~~ 95 (506)
...+.+.|++++.++++.+.+++++.. |-. +.++|++++. ..+.+...+++++++++.+.+.++.++|+|| ||
T Consensus 12 k~en~~~~~~~~~~~~~~~~~~r~~~~--p~d~~~~~~~~~~~---~~~~~~~~~~~~~l~~l~~~l~~~sv~~~~P~ry 86 (608)
T TIGR03811 12 KAENGQLYKDLLNKLVDEHLGWRQNYM--PQDKPVISPQERTS---KSFTKTVNNMKDVLDELSSRLRTESVPWHSAGRY 86 (608)
T ss_pred cccCHHHHHHHHHHHHHHHHHHHHhcC--CCCCCCCCHHHhcc---cccccCccCHHHHHHHHHHHHhcCCCCCCCccce
Confidence 457788999999999999999999843 322 3466776655 3455556689999999999999999999999 99
Q ss_pred cccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHH
Q 048643 96 FAYFPSSGSIAGFLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTA 175 (506)
Q Consensus 96 ~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ 175 (506)
+||+++++.+|++++++++..+|+|...|+.||+++.+|+++++|+++++|++.. +|+||+|||+||+.||++
T Consensus 87 ~ghm~~~~~~paila~~~a~~~N~n~~~~e~SP~~t~lE~~vi~~la~l~G~~~~-------~G~~TsGGT~ANl~aL~~ 159 (608)
T TIGR03811 87 WGHMNSETLMPAILAYNYAMLWNGNNVAYESSPATSQMEEEVGKEFATLMGYKNG-------WGHIVADGSLANLEGLWY 159 (608)
T ss_pred EEECcCCCCHHHHHHHHHHHHhCCCCCccccCchHHHHHHHHHHHHHHHhCCCCC-------CeEEeCChHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999874 789999999999999999
Q ss_pred HHHHHH-----Hhh---------ccc--------------------------------CCCCe-EEEeCCCCchHHHHHH
Q 048643 176 ARDRVL-----NKI---------GRE--------------------------------NISKL-VVYGSDQTHCALQKAA 208 (506)
Q Consensus 176 ar~~~~-----~~~---------~~~--------------------------------~~~~~-~v~~s~~~H~s~~ka~ 208 (506)
||+.+. +.. +|+ ...+. ++++|+.+|||+.|++
T Consensus 160 AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa 239 (608)
T TIGR03811 160 ARNIKSLPFAMKEVKPELVAGKSDWELLNMPTKEIMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLKAA 239 (608)
T ss_pred HHHhhhccchhhhccccccccccchhhcccccccccccccccccchhhhhhhccccccccccceEEEECCCccHHHHHHH
Confidence 999641 110 000 01122 7999999999999999
Q ss_pred HHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHH---HHhCC--EEE
Q 048643 209 QIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVA---KQFGI--WVH 283 (506)
Q Consensus 209 ~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia---~~~g~--~lh 283 (506)
.++|+|.++++.||+|. +++||+++|+++|+++.++|..|++||+|+|||.+|+||||++|+++| +++|+ |+|
T Consensus 240 ~ilGlG~~~vv~VpvD~--~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~gl~~~lH 317 (608)
T TIGR03811 240 DIIGIGLDQVIPVPVDS--NYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIVALRNKLMKEGIYFYLH 317 (608)
T ss_pred HHcCCCcccEEEeecCC--CCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHHHHHHHHHHHcCCceeEe
Confidence 99999999999999985 579999999999999999999999999999999999999999999999 67898 699
Q ss_pred eeccccccc--ccC------------------------------ccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEe
Q 048643 284 VDAAYAGSA--CIC------------------------------PEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVK 331 (506)
Q Consensus 284 VDaA~gg~~--~~~------------------------------~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r 331 (506)
|||||||++ +++ +++++.+.|+++||||++|+|||+++||+||++++|
T Consensus 318 VDAAyGG~~~~l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gle~ADSItvDpHK~g~~Py~~G~ll~R 397 (608)
T TIGR03811 318 VDAAYGGYGRAIFLDEDDNFIPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAISEAESVTIDPHKMGYIPYSAGGIVIQ 397 (608)
T ss_pred eeccccchhhhhhccccccccccchhhcccccccccccccccccHhHHHHHhcCcCceEEEeCcccccccCCCeEEEEEe
Confidence 999999975 222 356778899999999999999999999999999999
Q ss_pred CchhHHhhhcCCccccCCccccCCCccCCCCccccCCCC-CCchHHHHHHHHh--chhHHHHHHHHHHHHHHHHHHHHHc
Q 048643 332 DPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRR-FRSLKLWLVIRNY--GVANLRHFLRSHVNMAKLFERLVAS 408 (506)
Q Consensus 332 ~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~l~~~--G~~g~~~~i~~~~~~a~~l~~~l~~ 408 (506)
++. +.+.++..++|+.....+ .....+.+++++||+ ++++++|++++.+ |.+||++++++++++|++|.+.|++
T Consensus 398 d~~-~~~~~~~~a~Yl~~~~~~--~p~~~g~~~legSR~ga~AlklW~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~ 474 (608)
T TIGR03811 398 DIR-MRDVISYFATYVFEKGAD--IPALLGAYILEGSKAGATAASVWAAHKVLPLNVTGYGKLIGASIEGAHRFYDFLNN 474 (608)
T ss_pred CHH-HHHHHhcCcchhcccccc--CcccccccceecCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 996 566788899999753221 112456788999986 7799999999998 9999999999999999999999988
Q ss_pred ------CCCCc------c--ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHh------cCcEEEeeeeE----
Q 048643 409 ------DKRVS------P--SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINA------SGKAYMTHAVC---- 464 (506)
Q Consensus 409 ------~~~~~------p--~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------~g~~~~~~~~~---- 464 (506)
.+.|+ | ++||||+.+.+ ..+.+..|++|+++.+++.- ...++++.|.+
T Consensus 475 ~~~~~~~~~~el~~~~~pdlniV~Fr~~~~g--------~~~l~~~n~ln~~i~~~~~~~~g~~~~~~~~~s~t~~~~~~ 546 (608)
T TIGR03811 475 LEFKVGDKEIEVHPLTKPDFNMVDYVFNEKG--------NDDLVKMNKLNHAFYDYASYVKGSIYNNEFITSHTDFAIPD 546 (608)
T ss_pred cccccCCCCeeEEecCCCCcceEEEEEecCC--------CccHHHHHHHHHHHHHhhccccCCCCCcceEeeecccccch
Confidence 34455 4 99999998763 12346689999999998761 22245555532
Q ss_pred ----------------------CCEEEEEEEecCCCCCH-HHHHHHHHHHHHHHHHH
Q 048643 465 ----------------------GGIYAMRFAVGATLTEE-RHVMVAWTMVQEQLEAF 498 (506)
Q Consensus 465 ----------------------~g~~~lR~~~~~~~tt~-edi~~li~~l~~~~~~l 498 (506)
....+||.++|+|..++ +.++.+++.|++...+.
T Consensus 547 yg~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~m~p~~~~~~~~~~~~~~~~~~~~~~ 603 (608)
T TIGR03811 547 YGDSPFAFVNSLGFSDEEWQRAGKVTILRASVMTPYMNDKENFDEYAPKIKAAMQEK 603 (608)
T ss_pred hhhhHHHHHHHcCCChhhhccCCceEEEEEEecCcccCChhhHHHHHHHHHHHHHHH
Confidence 13579999999998776 66788888887776554
No 8
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=100.00 E-value=1.6e-59 Score=482.76 Aligned_cols=435 Identities=24% Similarity=0.311 Sum_probs=359.9
Q ss_pred HHHHHHhcCCCCCCCCCChhHHhhhCCCCCCCCCCCHHHHHHHHHHH-hcCCCCCCCCCCccccCCCCCCHHHHHHHHHH
Q 048643 36 IADYYKNVDKYPVRSQVEPGYLRKRLPECAPYNPESMETILQDVQEH-IVPGVTHWQSPNYFAYFPSSGSIAGFLGEMLS 114 (506)
Q Consensus 36 ~~~~~~~~~~~p~~~~~~p~~l~~~~~~~~p~~~~~~~~il~~~~~~-~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~ 114 (506)
+.++......++..+...|-+-.......+|+.+.+.++++.++... +.+...++.||+++.|..+.+.++..+.+.+.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~g~p~~~v~~~l~~~~~~d~~~~~~~p~~~~~~~~~~~~~~~a~~~~~ 83 (460)
T COG0076 4 LIDKDMLNSKRYSGDSLSPLFGALSDSRMAPEKGEPLEEVLDELAELLIKDELYLDGHPRANLAGFCPTRVPPVAAELLV 83 (460)
T ss_pred HHHHHHhhccCCCccccccchhhhhhhccCCccCCchhhHHHHHHHHhhcccccccCCcceEEEccCCCCCHHHHHHHHH
Confidence 44444554555555555666655666678999999999999999887 55666666799999999999999999999999
Q ss_pred hhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhccc-C--CCC
Q 048643 115 SGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRE-N--ISK 191 (506)
Q Consensus 115 ~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~-~--~~~ 191 (506)
.++|+|...|+.+|+++++|++++.|+++++|++..+ .|+||+|||+||+.|++++|+++.+..+.. + .+.
T Consensus 84 ~~~~~nl~d~~~~p~a~~~E~~~v~~l~~l~~~~~~~------~G~~t~GgTean~lal~aar~~~~~~~~~~~~~~~~~ 157 (460)
T COG0076 84 SALNKNLGDPDESPAAAELEERVVNMLSDLLGAPEEA------SGTFTSGGTEANLLALLAARERWRKRALAESGKPGGK 157 (460)
T ss_pred HHHhhcCCCcccChhHHHHHHHHHHHHHHHhCCCCCC------ceEEEcChHHHHHHHHHHHHHHHHHHhhhcccccCCC
Confidence 9999999999999999999999999999999998664 899999999999999999999987543321 1 134
Q ss_pred eEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHH
Q 048643 192 LVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPL 271 (506)
Q Consensus 192 ~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I 271 (506)
++|++|..+|+|+.|+++++|+ .++.+|+++. +++||+++|+++|++++..| +||+++|||++|.+|||++|
T Consensus 158 P~ii~s~~aH~s~~Kaa~~lG~---~~~~v~~~~~-~~~id~~~l~~~i~~~t~~g----~vV~~aGtT~~G~iDdi~~i 229 (460)
T COG0076 158 PNIVCSETAHFSFEKAARYLGL---GLRRVPTVPT-DYRIDVDALEEAIDENTIGG----VVVGTAGTTDTGSIDDIEEL 229 (460)
T ss_pred CeEEecCcchhHHHHHHHHhCC---CceeEEeccC-ccccCHHHHHHHHHhhccCc----eEEEEecCCCCCccCCHHHH
Confidence 5899999999999999999999 6777777654 57999999999999998766 79999999999999999999
Q ss_pred HHHHHHhCCEEEeecccccccccCccchhh-hcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCc
Q 048643 272 CDVAKQFGIWVHVDAAYAGSACICPEFQHF-IDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNK 350 (506)
Q Consensus 272 ~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~-~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~ 350 (506)
++||++|++|+||||||||+.+++.+.+.. ..++++||||++|+|||+++|++||++++||++.+.+.+.....|+...
T Consensus 230 a~ia~~~~i~lHVDAA~GG~~~pf~~~~~~~~f~l~~vdSIt~d~HK~g~aP~~~G~il~rd~e~l~~~~~~~~~yl~~~ 309 (460)
T COG0076 230 ADIAEEYGIWLHVDAAFGGFLLPFLEPDGRWDFGLEGVDSITVDGHKYGLAPIGCGVVLFRDEEALRRILIFADYYLPGG 309 (460)
T ss_pred HHHHHHcCCcEEEEccccceeecccCccchhhcCCCCceEEEECcccccCCCCCceEEEEECHHHhhhhhhcccccCCCC
Confidence 999999999999999999999988887777 6889999999999999999999999999999987877777777777642
Q ss_pred cccCCCccCCCCccccCCCCC-CchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc----c--ceEEEeecC
Q 048643 351 ATESKQVVDYKDWQITLSRRF-RSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS----P--SAVMDKLKP 423 (506)
Q Consensus 351 ~~~~~~~~~~~~~~~~~sr~~-~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~----p--~~v~f~~~~ 423 (506)
...++++.+||.. .++++|+.++.+|.+||+++++++++++++|+++|++.+.|+ | ++||||+++
T Consensus 310 --------~~~~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~~p~l~~V~fr~~~ 381 (460)
T COG0076 310 --------GIPNFTILGSRPGRQALALYANLRRLGREGYRKLLDRTLELARYLAEELEKLGDFELVNEPELPIVAFRLKD 381 (460)
T ss_pred --------CcCceeEeeccchHHHHHHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHhCCCcEeecCCccceEEEEcCC
Confidence 2345677888885 789999999999999999999999999999999999998788 5 999999954
Q ss_pred CCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 048643 424 KYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAF 498 (506)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l 498 (506)
..- ......+..+..+..+......+|..++..+.+.++..+++.+.++.++.++ +.+...+...++++
T Consensus 382 ~~~-----~~~~~~~~~~~~gw~v~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 450 (460)
T COG0076 382 DED-----TLADLSERLDRRGWQVPAQLLPKGLAIVFGTHVTGRQGLKFIVANLLITDRE-ESLLALIEEPGREI 450 (460)
T ss_pred ccc-----chhchHHHHHhcCceeecccCCccceeeeeeEEeeeeeehhhcchhhhhhhh-HHHHHHhhhhhhhh
Confidence 310 0001122223334444455555676677777788888999999888888877 66666666655555
No 9
>PLN02263 serine decarboxylase
Probab=100.00 E-value=1.3e-58 Score=471.41 Aligned_cols=353 Identities=20% Similarity=0.260 Sum_probs=303.3
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCccccCCCCCCH-HHHHHHHHHhhcCCCCcccccCh---hhHHHHHHHHHHHHHHcCC
Q 048643 72 METILQDVQEHIVPGVTHWQSPNYFAYFPSSGSI-AGFLGEMLSSGFNVVGFNWISSP---AATELENIVMDWLGQMLKL 147 (506)
Q Consensus 72 ~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~l~~~~n~~~~~~~~~p---~~~~lE~~~~~~la~l~g~ 147 (506)
++++|+++.+.+.++..+ |+|| |...++ ++.+++++...+|+-+..|..+| ...++|+++++|+++++|+
T Consensus 75 ~~~~l~~~~~~~~~~~~~-----~~gY-p~n~~~d~s~l~~~l~~~~nN~Gdp~~~s~~~~~s~~~E~~Vi~wla~L~g~ 148 (470)
T PLN02263 75 MASVLARYRKTLVERTKH-----HLGY-PYNLDFDYGALGQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWEI 148 (470)
T ss_pred HHHHHHHHHHHHHhcccc-----eeCC-CCcccCChhhHHHHHHhhccCCCCccccCCcchhHHHHHHHHHHHHHHHhCC
Confidence 589999999999887654 9999 777777 89999999999999999999998 7999999999999999999
Q ss_pred CC-ccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCC
Q 048643 148 PK-SFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKS 226 (506)
Q Consensus 148 ~~-~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~ 226 (506)
|+ ++ +|++|+|||+||++||++||+.+ ++.++|+|+++|+|+.|+++++|+ +++.||+++
T Consensus 149 p~~~~------~G~vtsGGTEaNL~Al~aARe~~---------~~~vvy~S~~aH~Sv~KAa~llgi---~~~~Vp~d~- 209 (470)
T PLN02263 149 EKNEY------WGYITNCGTEGNLHGILVGREVF---------PDGILYASRESHYSVFKAARMYRM---ECVKVDTLV- 209 (470)
T ss_pred CCCCC------eEEEeCcHHHHHHHHHHHHHhhc---------CCcEEEEcCCccHHHHHHHHhcCC---cceEeccCC-
Confidence 86 43 79999999999999999999963 456899999999999999999999 999999985
Q ss_pred CCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCC-----EEEeecccccccccCccchhh
Q 048643 227 SSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGI-----WVHVDAAYAGSACICPEFQHF 301 (506)
Q Consensus 227 ~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~-----~lhVDaA~gg~~~~~~~~~~~ 301 (506)
+|+||+++|+++|.+++ .+|++|++|+|||++|+||||++|+++|++||+ |+||||||||+++++-+....
T Consensus 210 -~g~mD~~aL~~aI~~d~---~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~~~~~ 285 (470)
T PLN02263 210 -SGEIDCADFKAKLLANK---DKPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVKRAPK 285 (470)
T ss_pred -CCcCcHHHHHHHHHhCC---CCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCeeEEEeccchhhHhhhcccccc
Confidence 57999999999998754 479999999999999999999999999999997 999999999998865444445
Q ss_pred hcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCccccCCCCC-CchHHHHHH
Q 048643 302 IDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRF-RSLKLWLVI 380 (506)
Q Consensus 302 ~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~-~al~~~~~l 380 (506)
+.+.+.+|||++|+|||+++|++||++++|++. ..++...++|+... +.++++||++ .++++|++|
T Consensus 286 ~df~~~vDSIsvD~HK~l~~P~~cgvll~R~~~--~~~~~~~~~Yl~~~-----------d~ti~gSR~g~~al~lW~~L 352 (470)
T PLN02263 286 VTFKKPIGSVSVSGHKFVGCPMPCGVQITRMEH--INVLSSNVEYLASR-----------DATIMGSRNGHAPIFLWYTL 352 (470)
T ss_pred cCCCcCccEEEECCccccCCCcCEEEEEEehhh--HhhhccChHhhCCC-----------CCCcCCCCCcHHHHHHHHHH
Confidence 666777999999999999999999999999753 35778889999753 2478899997 589999999
Q ss_pred HHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc----c--ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhc
Q 048643 381 RNYGVANLRHFLRSHVNMAKLFERLVASDKRVS----P--SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINAS 454 (506)
Q Consensus 381 ~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~----p--~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 454 (506)
+.+|.+|+++++++++++|++|.++|++. +++ | ++|+|+.... . +..+
T Consensus 353 ~~~G~~G~~~~i~~~~~~A~~l~~~l~~~-g~~~~~~p~s~~V~f~~p~~-----------------~--------~~~~ 406 (470)
T PLN02263 353 NRKGYRGFQKEVQKCLRNAHYLKDRLREA-GISAMLNELSSTVVFERPKD-----------------E--------EFVR 406 (470)
T ss_pred HHhCHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEEeCCCceEEEEecCch-----------------H--------Hhhc
Confidence 99999999999999999999999999998 565 5 8899974221 1 1234
Q ss_pred CcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 048643 455 GKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAF 498 (506)
Q Consensus 455 g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l 498 (506)
|+. ++.. +..+|+++| ++.+++.||++++.|++.....
T Consensus 407 gW~-L~~~----~~~~Hivvm-phv~~~~id~fi~DL~~~~~~~ 444 (470)
T PLN02263 407 RWQ-LACQ----GNIAHVVVM-PSVTIEKLDYFLKELVEKRSTW 444 (470)
T ss_pred ceE-EccC----CCcEEEEEc-CCCCHHHHHHHHHHHHHHHhhh
Confidence 663 3331 246999997 6677889999999999887654
No 10
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=100.00 E-value=2.2e-56 Score=458.88 Aligned_cols=392 Identities=16% Similarity=0.188 Sum_probs=327.9
Q ss_pred CCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHH
Q 048643 63 ECAPYNPESMETILQDVQEHIVPGVTHWQSPNYFAYFPSSGSIAGFLGEMLSSGFNVVGFNWISSPAATELENIVMDWLG 142 (506)
Q Consensus 63 ~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la 142 (506)
.++|++|.+.+++++++...+. ..+..||+|++|+.+++.+. +.+++..++|++...|..+|..+++|+++++|++
T Consensus 15 ~~~p~~~~~~~~~~~~~~~~iy--ld~~a~~~~~~~~tt~~~p~--~~~~~~~~l~~~~~np~s~~~~~~le~~~~~~la 90 (431)
T TIGR01788 15 YRMPEEEMPPDAAYQLIHDELS--LDGNPRLNLATFVTTWMEPE--ARKLMDETINKNMIDKDEYPQTAEIENRCVNMLA 90 (431)
T ss_pred ccCCCCCCCHHHHHHHHHHHhh--hcCCcceeeeeeeCCCCCHH--HHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHH
Confidence 4789999999999999998764 24557899999998766555 5888888999888888888988999999999999
Q ss_pred HHcCCC-C--ccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccC--CCCeEEEeCCCCchHHHHHHHHhCCCCCC
Q 048643 143 QMLKLP-K--SFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGREN--ISKLVVYGSDQTHCALQKAAQIVGIDLKN 217 (506)
Q Consensus 143 ~l~g~~-~--~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~--~~~~~v~~s~~~H~s~~ka~~~~G~g~~~ 217 (506)
+++|++ . +. .|++|+||||||++||.++|.+...+....+ ..+.+||+|+.+|+|+.|+++++|+ +
T Consensus 91 ~llg~~~~~~~~------~g~~TsGgTEAn~~al~~ar~~~~~~~~~~g~~~~~~~ii~s~~~H~sv~ka~~~lg~---~ 161 (431)
T TIGR01788 91 DLWHAPAKDAEA------VGTSTIGSSEAIMLGGLAMKWRWRKRMEAAGKPTDKPNLVMGSNVQVCWEKFARYFDV---E 161 (431)
T ss_pred HHhCCCCCCCCC------eEEEechHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCcchHHHHHHHHHcCc---e
Confidence 999998 2 32 6788999999999999999865433211111 1356899999999999999999999 9
Q ss_pred eEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHh------CCEEEeecccccc
Q 048643 218 FRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQF------GIWVHVDAAYAGS 291 (506)
Q Consensus 218 v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~------g~~lhVDaA~gg~ 291 (506)
++.||+++ ++++||+++|+++|+++ +++|++++|+|.+|++||+++|+++|+++ |+|+||||||||+
T Consensus 162 v~~i~~d~-~~~~vd~~~L~~~i~~~------t~lV~~t~g~t~tG~idpi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~ 234 (431)
T TIGR01788 162 LREVPMDP-GRYVIDPEQVVEAVDEN------TIGVVCILGTTYTGEYEDVKALNDALDEYNAKTGWDIPIHVDAASGGF 234 (431)
T ss_pred eEEEecCC-CceeeCHHHHHHHHhhC------CeEEEEEeCCCCCcccCCHHHHHHHHHHHHhhhCCCceEEEecccHHH
Confidence 99999986 23699999999999875 46899999999999999999999999999 9999999999998
Q ss_pred ccc--CccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCccccCCC
Q 048643 292 ACI--CPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSR 369 (506)
Q Consensus 292 ~~~--~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr 369 (506)
+++ .++.+..+. ++++||+++|+|||+++|+|||++++|++..+...+...++|+... ..++++++||
T Consensus 235 ~~p~~~~~~~~~~~-~~~~DSis~s~HK~~~~P~g~G~l~~r~~~~l~~~~~~~~~yl~~~---------~~~~t~~~sR 304 (431)
T TIGR01788 235 IAPFVYPDLEWDFR-LPRVKSINVSGHKYGLVYPGVGWVIWRDEEALPEELIFHVNYLGGD---------EPTFTLNFSR 304 (431)
T ss_pred HHHHhCCCchhhcC-CCCceEEEECchhccCCCCCcEEEEEeChHHcchhheecccccCCC---------CCCcceecCc
Confidence 763 345555444 6799999999999999999999999999866656677778898542 1235888999
Q ss_pred CC-CchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc-----c--ceEEEeecCCCcccccccccchHHHHH
Q 048643 370 RF-RSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS-----P--SAVMDKLKPKYENCHSQQLVTEEEAIN 441 (506)
Q Consensus 370 ~~-~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~-----p--~~v~f~~~~~~~~~~~~~~~~~~~~~~ 441 (506)
++ +++++|+.|+.+|.+|++++++++++++++|.++|++.|+|+ | ++|||++.+.. +.+
T Consensus 305 ~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~~~~~~~~iV~Fr~~~~~-------------~~~ 371 (431)
T TIGR01788 305 PANQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLGPFEIISDGSGIPLVAFKLKDDA-------------DPG 371 (431)
T ss_pred hHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeCCCCceEEEEEeCCCC-------------CCC
Confidence 86 789999999999999999999999999999999999999898 3 99999997631 001
Q ss_pred HHHHHHHHHHHhcCcEE---EeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 048643 442 EFNRELLESINASGKAY---MTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAF 498 (506)
Q Consensus 442 ~~~~~l~~~l~~~g~~~---~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l 498 (506)
..+.++.++|.++|+++ .+++.++|..++|++++ ++++++.++++++.|+++...+
T Consensus 372 ~~~~~l~~~L~~~G~~~~~~~~p~~~~~~~~lR~~~~-~~~~~~~~~~~~~~~~~~~~~~ 430 (431)
T TIGR01788 372 YTLYDLSHRLRERGWIVPAYTLPKNAEDIVVMRIVVR-EGFSRDLAELLIEDIEAALAYL 430 (431)
T ss_pred cCHHHHHHHHHHCCCcccCCCCCCccCCeEEEEEEec-CCCCHHHHHHHHHHHHHHHHhh
Confidence 23678889999999864 55566889999999995 6777789999999999987664
No 11
>PLN03032 serine decarboxylase; Provisional
Probab=100.00 E-value=4.2e-50 Score=404.23 Aligned_cols=351 Identities=21% Similarity=0.248 Sum_probs=281.5
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCccccCCCCCCHHHHHHHHHHhhcCCCCccccc---ChhhHHHHHHHHHHHHHHcCCC
Q 048643 72 METILQDVQEHIVPGVTHWQSPNYFAYFPSSGSIAGFLGEMLSSGFNVVGFNWIS---SPAATELENIVMDWLGQMLKLP 148 (506)
Q Consensus 72 ~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~---~p~~~~lE~~~~~~la~l~g~~ 148 (506)
..++++.+.+.+.. ++..|+||..+...-++.+..++....|+.+..+.. +..+.++|+++++|+++++|++
T Consensus 8 ~~~~~~~~~~~~~~-----~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~gnP~s~~~~g~~a~~~e~~v~~~ia~llg~~ 82 (374)
T PLN03032 8 MADILASYDKLLAE-----KSSVHFGYPYNLDFDYGELSQLMKYSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELE 82 (374)
T ss_pred HHHHHHHHHHHHHH-----hhhhccCCCchhccChHHHHHHHHhcccCCCCCcccCCCCccHHHHHHHHHHHHHHHhCCC
Confidence 45666777665543 356799998776555567777777655544444433 3368999999999999999998
Q ss_pred CccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCC
Q 048643 149 KSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSS 228 (506)
Q Consensus 149 ~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~ 228 (506)
++. .+|+||+||||||++|+.++|+.. ++.+||+|..+|+|+.|+++++|+ .++.||++. +
T Consensus 83 ~~~-----~~G~fTsGGTEaNl~al~~ar~~~---------~~~~vi~s~~~H~Sv~kaa~~lg~---~~~~V~~d~--~ 143 (374)
T PLN03032 83 KDE-----YWGYITTCGTEGNLHGILVGREVF---------PDGILYASRESHYSVFKAARMYRM---EAVKVPTLP--S 143 (374)
T ss_pred Ccc-----CCEEEeCchHHHHHHHHHHHHHhC---------CCcEEEeCCCceeHHHHHHHHcCC---CCeEeeeCC--C
Confidence 641 268999999999999999998752 345899999999999999999999 789999986 5
Q ss_pred cccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhC-----CEEEeecccccccccCccchhhhc
Q 048643 229 YGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFG-----IWVHVDAAYAGSACICPEFQHFID 303 (506)
Q Consensus 229 ~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g-----~~lhVDaA~gg~~~~~~~~~~~~~ 303 (506)
|+||+++|+++|++++ ..|++|++++|||.+|+|||+++|+++|++|| +|+|||||||++.+++......++
T Consensus 144 g~id~~~L~~~i~~~~---~~~~lvv~tagtt~tG~idpi~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~ 220 (374)
T PLN03032 144 GEIDYDDLERALAKNR---DKPAILNVNIGTTVKGAVDDLDRILRILKELGYTEDRFYIHCDGALFGLMMPFVSRAPEVT 220 (374)
T ss_pred CcCcHHHHHHHHHHcC---CCCEEEEEEecCcCCccCCCHHHHHHHHHHhCCCCCCeeEEEEccchhhhhhccCCCcccC
Confidence 7999999999998653 36889999999999999999999999999996 599999999998776533333334
Q ss_pred CCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCccccCCCC-CCchHHHHHHHH
Q 048643 304 GVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRR-FRSLKLWLVIRN 382 (506)
Q Consensus 304 gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~l~~ 382 (506)
....+||+++|+|||+++|++||++++|++. + ..+...++|+... ++++++||+ ++++++|++|+.
T Consensus 221 ~~~~vDSis~s~HK~~g~P~g~G~ll~r~~~-~-~~~~~~~~Yl~~~-----------d~ti~gSR~g~~~l~~w~~l~~ 287 (374)
T PLN03032 221 FRKPIGSVSVSGHKFLGCPMPCGVALTRKKH-V-KALSQNVEYLNSR-----------DATIMGSRNGHAPLYLWYTLRR 287 (374)
T ss_pred CCcCCcEEEECcccccCCCcCeEEEEEEchh-h-HhhccCCcccCCC-----------CCcccCCCchHHHHHHHHHHHH
Confidence 4457999999999999999999999999753 2 4577788998642 358999997 689999999999
Q ss_pred hchhHHHHHHHHHHHHHHHHHHHHHcCCCCc----c--ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCc
Q 048643 383 YGVANLRHFLRSHVNMAKLFERLVASDKRVS----P--SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGK 456 (506)
Q Consensus 383 ~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~----p--~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~ 456 (506)
+|.+||++++++++++|++|.++|++. +++ | ++|+|+.... ..+. +|+
T Consensus 288 ~G~~g~~~~~~~~~~~a~~l~~~l~~~-~~~~~~~p~~~~V~f~~~~~--------------------~~~~-----~~w 341 (374)
T PLN03032 288 KGYRGIKRDVQHCMRNAHYLKDRLTEA-GLTCRLNELSSTVVFERPMD--------------------EAFI-----KKW 341 (374)
T ss_pred hCHHHHHHHHHHHHHHHHHHHHHHHhC-CCcEEECCCceEEEEcCCCc--------------------HhHh-----hee
Confidence 999999999999999999999999986 666 6 8888876432 1111 355
Q ss_pred EEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHH
Q 048643 457 AYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQ 494 (506)
Q Consensus 457 ~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~ 494 (506)
.++.. +.++|+++| ++.+++.||+|++.|++.
T Consensus 342 -~l~~~----~~~~hi~vm-~~~~~~~id~fi~dl~~~ 373 (374)
T PLN03032 342 -QLACE----GDIAHVVVM-PNVTVEKLDEFVEELVEV 373 (374)
T ss_pred -eeccc----CCEEEEEEC-CCCCHHHHHHHHHHHhcc
Confidence 23322 138999998 777888999999998753
No 12
>PRK02769 histidine decarboxylase; Provisional
Probab=100.00 E-value=3.3e-48 Score=393.44 Aligned_cols=349 Identities=21% Similarity=0.295 Sum_probs=282.2
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCccccCCCCCCH-HHHHHHHHHhhcCCCCcccccCh----hhHHHHHHHHHHHHHHcCC
Q 048643 73 ETILQDVQEHIVPGVTHWQSPNYFAYFPSSGSI-AGFLGEMLSSGFNVVGFNWISSP----AATELENIVMDWLGQMLKL 147 (506)
Q Consensus 73 ~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~l~~~~n~~~~~~~~~p----~~~~lE~~~~~~la~l~g~ 147 (506)
.+.|+.+...+. +||+|+.++|..... .+.+.+++....|+.+. +...+ .+.++|+++++|+++++|+
T Consensus 8 ~~~~~~~~~~~~------~~~~~~~g~p~~~~~~~~~~~~~~~~~~~n~gn-p~~~~~~g~~~~~~e~~~~~~~a~l~g~ 80 (380)
T PRK02769 8 QKEIEDFWLYLR------HNQYFNVGYPEAADFDYSALKRFFSFSINNCGD-PYSKSNYPLNSFDFERDVMNFFAELFKI 80 (380)
T ss_pred HHHHHHHHHHHH------HhhhcccCCCchhhcCHHHHHHHHHhhhccCCC-ccccCCCCCChHHHHHHHHHHHHHHhCC
Confidence 556666666553 577777777766655 68889999887776443 33344 4789999999999999999
Q ss_pred CCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCC
Q 048643 148 PKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSS 227 (506)
Q Consensus 148 ~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~ 227 (506)
++.. ..|+||+|||++|+.|++++|++. ++.+||+|+.+|+|+.|+++++|+ +++.||+++
T Consensus 81 ~~~~-----~~G~~TsGgTean~~a~~~ar~~~---------~~~~ii~s~~~H~Sv~ka~~~lg~---~~~~V~~~~-- 141 (380)
T PRK02769 81 PFNE-----SWGYITNGGTEGNLYGCYLARELF---------PDGTLYYSKDTHYSVSKIARLLRI---KSRVITSLP-- 141 (380)
T ss_pred CCCC-----CCEEEecChHHHHHHHHHHHHHhC---------CCcEEEeCCCceehHHHHHHHcCC---CCceeccCC--
Confidence 7542 268999999999999999999752 456899999999999999999999 788899875
Q ss_pred CcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhC---CEEEeecccccccccCccchhhhcC
Q 048643 228 SYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFG---IWVHVDAAYAGSACICPEFQHFIDG 304 (506)
Q Consensus 228 ~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g---~~lhVDaA~gg~~~~~~~~~~~~~g 304 (506)
+|+||+++|+++|+++ +.+|.+|++++|||.+|++||+++|+++|++|| +|+|||||||++.+++.+....++.
T Consensus 142 ~g~id~~~L~~~i~~~---~~~t~lvv~t~gtt~tG~idpi~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~~~~d~ 218 (380)
T PRK02769 142 NGEIDYDDLISKIKEN---KNQPPIIFANIGTTMTGAIDNIKEIQEILKKIGIDDYYIHADAALSGMILPFVNNPPPFSF 218 (380)
T ss_pred CCcCcHHHHHHHHHhC---CCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCCceEEEEEecccceeecccCccccCCc
Confidence 5799999999999875 667889999999999999999999999999998 6999999999988876544444554
Q ss_pred CCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCccccCCCC-CCchHHHHHHHHh
Q 048643 305 VEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRR-FRSLKLWLVIRNY 383 (506)
Q Consensus 305 i~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~l~~~ 383 (506)
.+++||+++|+|||+++|+|||++++|++. + ..+....+|+.. .++++++||+ +.++++|.+|+.+
T Consensus 219 ~~~vDsis~s~HK~~~~P~g~G~l~~r~~~-~-~~~~~~~~yl~~-----------~d~t~~GSR~g~~~l~lw~aL~~l 285 (380)
T PRK02769 219 ADGIDSIAISGHKFIGSPMPCGIVLAKKKY-V-ERISVDVDYIGS-----------RDQTISGSRNGHTALLLWAAIRSL 285 (380)
T ss_pred cCCCCEEEECCcccCCCCCCcEEEEEehhh-h-hhcccCccccCC-----------CCCCccCCCCcHHHHHHHHHHHHH
Confidence 558999999999999999999999999753 2 344556677753 2357899997 6789999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHcCCCCc----c--ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcE
Q 048643 384 GVANLRHFLRSHVNMAKLFERLVASDKRVS----P--SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKA 457 (506)
Q Consensus 384 G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~----p--~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~ 457 (506)
|.+|++++++++.++++++.++|++. +++ | ++|+|+.... .+. +|+
T Consensus 286 g~~G~~~~~~~~~~la~~l~~~L~~~-g~~~~~~p~~~~v~f~~~~~---------------------~~~-----~~w- 337 (380)
T PRK02769 286 GSKGLRQRVQHCLDMAQYAVDRLQAN-GIPAWRNPNSITVVFPCPSE---------------------RIW-----KKW- 337 (380)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhC-CCEEEcCCCceEEEEcCCCH---------------------HHH-----hCe-
Confidence 99999999999999999999999885 777 6 8999974321 121 355
Q ss_pred EEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 048643 458 YMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLE 496 (506)
Q Consensus 458 ~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~ 496 (506)
.++.. +.++|+++| ++.+++.||++++.|.+...
T Consensus 338 ~l~~~----~~~~hi~~~-~~~~~~~~~~f~~dl~~~~~ 371 (380)
T PRK02769 338 HLATS----GNQAHIITM-PHHNKQQIDSLIDELIFDLK 371 (380)
T ss_pred eEccc----CCEEEEEEC-CCCCHHHHHHHHHHHHHHHh
Confidence 23332 238999998 67788899999998887654
No 13
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=100.00 E-value=1.5e-43 Score=359.04 Aligned_cols=334 Identities=34% Similarity=0.569 Sum_probs=285.6
Q ss_pred ccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCC-CccccCCCCcEEEcCCchHHHHHHH
Q 048643 95 YFAYFPSSGSIAGFLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLP-KSFLFSGNGGGVIQGTTCEAILCTL 173 (506)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~-~~~~~~~~~~g~~t~ggt~a~l~al 173 (506)
|++++++++.+++.++++++..+|++...|..+|...++|+++++|+++++|++ .. ..+++|+|||+||+.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~n~~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~------~~~~~t~ggt~a~~~al 74 (345)
T cd06450 1 FLAGFVTTMDPPALLLEMLTSAKNAIDFTWDESPAATEMEAEVVNWLAKLFGLPSED------ADGVFTSGGSESNLLAL 74 (345)
T ss_pred CcccccCCCcHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHHhCCCCCC------CCEEEeCChhHHHHHHH
Confidence 688888889999999999999999999889999999999999999999999997 32 27899999999999999
Q ss_pred HHHHHHHHHhhccc---CCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCcc
Q 048643 174 TAARDRVLNKIGRE---NISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVP 250 (506)
Q Consensus 174 ~~ar~~~~~~~~~~---~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p 250 (506)
.+++.++.++.... ..++.+|+++..+|+++.++++.+|. +++.||+++ ++.+|+++|+++++++.++|.++
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~~~~ 149 (345)
T cd06450 75 LAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSVEKAAAYLDV---KVRLVPVDE--DGRMDPEALEAAIDEDKAEGLNP 149 (345)
T ss_pred HHHHHHhhhhhhcccccccCCeEEEEcCcchhHHHHHHHHHhc---CeEEeeeCC--CCCcCHHHHHHHHHHHHHCCCCc
Confidence 99987543321111 11356899999999999999999999 999999976 35999999999999877777788
Q ss_pred EEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEE
Q 048643 251 LFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWV 330 (506)
Q Consensus 251 ~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~ 330 (506)
.+|+++.++|++|.++|+++|+++|++||+|+|+|+||+++....+..+....+++++|++++++|||+++|++||++++
T Consensus 150 ~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~p~g~g~~~~ 229 (345)
T cd06450 150 IMVVATAGTTDTGAIDPLEEIADLAEKYDLWLHVDAAYGGFLLPFPEPRHLDFGIERVDSISVDPHKYGLVPLGCSAVLV 229 (345)
T ss_pred EEEEEecccCCCCCCCCHHHHHHHHHHhCCeEEEechhhHHHhhChhhHHHhcCccccCEEEEchhHhhCCCcchHHHHH
Confidence 89999999999999999999999999999999999999988776655554444566899999999999999999998765
Q ss_pred eCchhHHhhhcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCC
Q 048643 331 KDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDK 410 (506)
Q Consensus 331 r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~ 410 (506)
+ ++++|.+++.++.+++++++++..++++++.+.|++.+
T Consensus 230 ~-----------------------------------------~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~ 268 (345)
T cd06450 230 R-----------------------------------------ALKLWATLRRFGRDGYGEHIDRIVDLAKYLAELIRADP 268 (345)
T ss_pred H-----------------------------------------HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 5 56789999999999999999999999999999999998
Q ss_pred CCc----c--ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHH
Q 048643 411 RVS----P--SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHV 484 (506)
Q Consensus 411 ~~~----p--~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi 484 (506)
+++ | ++++|++.+.. ..+..+.++.++|.++|.+++++..+.+..++|+++++++++++||
T Consensus 269 ~~~~~~~~~~~iv~f~~~~~~-------------~~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~lRis~~~~~~t~~di 335 (345)
T cd06450 269 GFELLGEPNLSLVCFRLKPSV-------------KLDELNYDLSDRLNERGGWHVPATTLGGPNVLRFVVTNPLTTRDDA 335 (345)
T ss_pred CeEEecCCceeEEEEEECCcc-------------hhhHHHHHHHHHHHhcCCEEEEeeEECCeEEEEEEecCCCCCHHHH
Confidence 877 3 89999986520 0123356788888888877777766667789999998888899999
Q ss_pred HHHHHHHHH
Q 048643 485 MVAWTMVQE 493 (506)
Q Consensus 485 ~~li~~l~~ 493 (506)
++++++|++
T Consensus 336 ~~l~~~l~~ 344 (345)
T cd06450 336 DALLEDIER 344 (345)
T ss_pred HHHHHHHHh
Confidence 999999876
No 14
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=100.00 E-value=3.4e-34 Score=293.39 Aligned_cols=361 Identities=20% Similarity=0.243 Sum_probs=266.5
Q ss_pred CCHHHHHHHHHHHhcCCCCCCCCCCccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCC
Q 048643 70 ESMETILQDVQEHIVPGVTHWQSPNYFAYFPSSGSIAGFLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPK 149 (506)
Q Consensus 70 ~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~ 149 (506)
.+.+++|+.+++...++..- . ||||.....+. +.++ +.+..++..+.......+...+++.++.+++++++|++.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~-~~~~-~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~ 76 (371)
T PRK13520 2 LSEEEILEELEEYRSEDLKY-E--RILSSMCTEPH-PIAR-KAHEMFLETNLGDPGLFPGTAKLEEEAVEMLGELLHLPD 76 (371)
T ss_pred CCHHHHHHHHHHHHhcCCCH-H--HeeeeeecCch-HHHH-HHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCCCC
Confidence 47889999999877665433 2 58887654433 3332 444444433322222235677888999999999999986
Q ss_pred ccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCc
Q 048643 150 SFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSY 229 (506)
Q Consensus 150 ~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~ 229 (506)
. .+++++|||++|..++.+++.... .++..|+++...|+++.++++..|+ +++.||+++ ++
T Consensus 77 ~-------~~~~~~ggt~a~~~a~~~~~~~~~-------~~~~~vl~~~~~h~s~~~~~~~~g~---~~~~v~~~~--~~ 137 (371)
T PRK13520 77 A-------YGYITSGGTEANIQAVRAARNLAK-------AEKPNIVVPESAHFSFDKAADMLGV---ELRRAPLDD--DY 137 (371)
T ss_pred C-------CeEEecCcHHHHHHHHHHHHhhcc-------CCCceEEecCcchHHHHHHHHHcCc---eEEEecCCC--CC
Confidence 5 678999999999999888776310 0356788899999999999999999 999999875 46
Q ss_pred ccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecccccccccCccchhhh-cCCCCC
Q 048643 230 GLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFI-DGVEGA 308 (506)
Q Consensus 230 ~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~-~gi~~a 308 (506)
.+|+++|+++|+++ +.+|+++.++|++|.++|+++|+++|+++|+|+|||+||+++.+........+ ....++
T Consensus 138 ~~d~~~l~~~i~~~------~~~vi~~~~~~~tG~~~~l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~~v 211 (371)
T PRK13520 138 RVDVKAVEDLIDDN------TIGIVGIAGTTELGQVDPIPELSKIALENGIFLHVDAAFGGFVIPFLDDPPNFDFSLPGV 211 (371)
T ss_pred cCCHHHHHHHHhhC------CEEEEEEcCCcCCcccCCHHHHHHHHHHcCCCEEEEecchhHHHHhhcCCCCccccCCCC
Confidence 99999999999764 34677888999999999999999999999999999999987754321110001 113479
Q ss_pred CeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCccccCCCC-CCchHHHHHHHHhchhH
Q 048643 309 DSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRR-FRSLKLWLVIRNYGVAN 387 (506)
Q Consensus 309 Dsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~l~~~G~~g 387 (506)
|++++++|||+..|.++|+++++++..+ ..+....+|+.... .+...++|. ...+.+|.+++.++.+|
T Consensus 212 d~~~~s~~K~~~a~~~~G~~~~~~~~~~-~~l~~~~~~~~~~~----------~~~~~gt~~~~~~~~~~~al~~l~~~g 280 (371)
T PRK13520 212 DSITIDPHKMGLAPIPAGGILFRDESYL-DALAVDTPYLTSKK----------QATLTGTRSGAGVAATYAVMKYLGREG 280 (371)
T ss_pred ceEEECCccccCccCCceEEEEcCHHHH-HhhcccCccccCCC----------CcceEeeccChHHHHHHHHHhhhcHhH
Confidence 9999999999999999999998876544 34443345543211 112234444 34578899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCc----c--ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEee
Q 048643 388 LRHFLRSHVNMAKLFERLVASDKRVS----P--SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTH 461 (506)
Q Consensus 388 ~~~~i~~~~~~a~~l~~~l~~~~~~~----p--~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~ 461 (506)
++++.++..+++++|.+.|++. +++ | ++++|.+.+ .+++.++|.++|+. +..
T Consensus 281 ~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~v~~~~~~--------------------~~~v~~~L~~~gi~-v~~ 338 (371)
T PRK13520 281 YRKVVERCMENTRWLAEELKER-GFEPVIEPVLNIVAFDDPN--------------------PDEVREKLRERGWR-VSV 338 (371)
T ss_pred HHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCceEEEEecCC--------------------HHHHHHHHHHCCce-ecc
Confidence 9999999999999999999987 776 3 778887642 24566677777763 443
Q ss_pred eeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 048643 462 AVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLE 496 (506)
Q Consensus 462 ~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~ 496 (506)
. .+..++|++++ +.+|++||+++++.|+++.+
T Consensus 339 ~--~~~~~iRis~~-~~~t~edi~~~~~~l~~~~~ 370 (371)
T PRK13520 339 T--RCPEALRIVCM-PHVTREHIENFLEDLKEVKK 370 (371)
T ss_pred C--CCCCEEEEEEE-CCCCHHHHHHHHHHHHHHhh
Confidence 2 23467999985 57899999999999988653
No 15
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.2e-34 Score=283.98 Aligned_cols=387 Identities=16% Similarity=0.177 Sum_probs=305.4
Q ss_pred CCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCccccCCC-CCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHH
Q 048643 63 ECAPYNPESMETILQDVQEHIVPGVTHWQSPNYFAYFPS-SGSIAGFLGEMLSSGFNVVGFNWISSPAATELENIVMDWL 141 (506)
Q Consensus 63 ~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~l 141 (506)
..+|++|.+-+++++.+.+...-... |.-.+--+-++. ....-..+.+.+..+ |...-+.-|....+|.++++++
T Consensus 54 ~~lP~~gl~~d~v~~~i~~~~~ld~~-~~~~~vS~~v~~~~~~~~~l~~~~~~k~---N~l~~d~fp~~~~~e~~~Vnm~ 129 (491)
T KOG1383|consen 54 FTLPSKGLPKDAVLELINDELMLDGN-PRLGLASGVVYWGEPELDKLIMEAYNKF---NPLHPDEFPVVRKLEAECVNMI 129 (491)
T ss_pred ecCCCCCCCHHHHHHHHHHHhccCCC-cccCeeeEEEecCCcchhhHHHHHHhhc---CccCccccchhHHHHHHHHHHH
Confidence 57899999999999999987765443 333333332222 233333333333332 5556677899999999999999
Q ss_pred HHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEE
Q 048643 142 GQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAI 221 (506)
Q Consensus 142 a~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v 221 (506)
+.||+.+.+. .|..|+|||++.+.+-...|++.... .++.++.++++...|.++.|+++++++ +++.|
T Consensus 130 ~~L~~~~~~~------~g~~t~G~Ses~l~~~k~~~~~r~~~---k~I~~p~iv~~~~v~~a~eK~a~yf~v---~l~~V 197 (491)
T KOG1383|consen 130 ANLFNAPSDS------CGCGTVGGSESGLAAKKSYRNRRKAQ---KGIDKPNIVTPQNVHAAFEKAARYFEV---ELREV 197 (491)
T ss_pred HHHhcCCccc------cCccccccchHHHHHHHHHHHHHHhc---cCCCCccccchHHHHHHHHHHHhhEEE---EEEee
Confidence 9999998663 78999999999777766666654332 456778899999999999999999999 99999
Q ss_pred ecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHH-hCCEEEeecccccccccC-----
Q 048643 222 KTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQ-FGIWVHVDAAYAGSACIC----- 295 (506)
Q Consensus 222 ~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~-~g~~lhVDaA~gg~~~~~----- 295 (506)
|+++ +++++|+..+.+.+.+++. +||++.|++++|.+||+++|+++.-+ +++.+|||+|-||+..+.
T Consensus 198 ~~~~-~~~~~D~~k~~~~i~eNti------~lv~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~~ 270 (491)
T KOG1383|consen 198 PLDE-GDYRVDPGKVVRMIDENTI------MLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVDACLGGFINPAGYLNE 270 (491)
T ss_pred eccc-cceEecHHHHHHHhccceE------EEEEEcCCCCccchhhHHHHHHHHHHHhCCceeecccCccccccccccCc
Confidence 9997 4799999999999998764 89999999999999999999999999 999999999999988741
Q ss_pred ccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCccccCCCC-CCch
Q 048643 296 PEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRR-FRSL 374 (506)
Q Consensus 296 ~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~-~~al 374 (506)
.++.. +..++-|++.|.||++.+|.|.|+++.|++..+...+.....|+... +..+|+.+||. +...
T Consensus 271 ~~fdF---r~p~V~Sisa~~HKYGl~~~G~~~vl~r~k~~~~~q~~~~~~w~Gg~---------y~s~TlngSR~g~~va 338 (491)
T KOG1383|consen 271 EEFDF---RVPGVTSISADGHKYGLAPAGSSWVLYRNKELLPHQLFFHTDWLGGI---------YASPTLNGSRPGSQVA 338 (491)
T ss_pred ccccc---CCCCceeEeeccceeeeeecCcEEEEEcccccccceEEEeccccCcc---------ccCcccccCCcccHHH
Confidence 12222 24489999999999999999999999999988766666677777542 44568999998 4557
Q ss_pred HHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc---cceEEEeecCCCcccccccccchHHHHHHH-HHHHHHH
Q 048643 375 KLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS---PSAVMDKLKPKYENCHSQQLVTEEEAINEF-NRELLES 450 (506)
Q Consensus 375 ~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p~~v~f~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~ 450 (506)
..|++|-.+|.+||.+..+++.+.+++|++.|+++++|. ++.|+|...... .+ --++.+.
T Consensus 339 ~~wa~~~~lG~eGY~~~~~~ive~~~~l~egie~i~~i~i~gkp~vs~~~~~s~----------------~~~i~elsd~ 402 (491)
T KOG1383|consen 339 AQWAALMSLGEEGYRENTQNIVETARKLREGIENIKGIKIVGKPLVSFILFGSN----------------DVNIFELSDL 402 (491)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhhccccceecCCCcEEEEEccCC----------------ccchhhhhHH
Confidence 889999999999999999999999999999999998887 267777665541 12 2466777
Q ss_pred HHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHccCC
Q 048643 451 INASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAFLTTNT 503 (506)
Q Consensus 451 l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l~~~~~ 503 (506)
|.+.|+..-..+... .+.+|++--++.++-.++++..|+++.++|...+.
T Consensus 403 l~~~GW~lnalq~P~---a~Hi~vt~~~~~~~~A~~~v~Di~~~~~el~~~p~ 452 (491)
T KOG1383|consen 403 LRKKGWILNALQFPA---AIHICVTRVHAREDVADRFVADIRKVVEELKSLPE 452 (491)
T ss_pred HHhcCcCccccCCCC---ceEEEEEeeeccHHHHHHHHHHHHHHHHHHHhCCC
Confidence 778899654444333 56777776667776679999999999999977654
No 16
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=100.00 E-value=2.7e-33 Score=286.99 Aligned_cols=361 Identities=19% Similarity=0.237 Sum_probs=263.1
Q ss_pred CHHHHHHHHHHHhcCCCCCCCCCCccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCc
Q 048643 71 SMETILQDVQEHIVPGVTHWQSPNYFAYFPSSGSIAGFLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKS 150 (506)
Q Consensus 71 ~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~ 150 (506)
+.+++++.+.+ +..+....++++++..+...+.++. .+.+..++..+.......|....+++++.+++++++|+++.
T Consensus 1 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~ 77 (373)
T TIGR03812 1 SEEEVLEELKE-YRSEDLKYSDGRILGSMCTNPHPIA--VKAYDMFIETNLGDPGLFPGTKKIEEEVVGSLGNLLHLPDA 77 (373)
T ss_pred CHHHHHHHHHH-HHhcCCCCCCCcEEEEEeCCchHHH--HHHHHHHhhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCC
Confidence 46889999998 5567777788998887765544442 22233333222211122355678889999999999999765
Q ss_pred cccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcc
Q 048643 151 FLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYG 230 (506)
Q Consensus 151 ~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~ 230 (506)
.+++++||+++++.++.+++..... +.++..|+++..+|+++.++++..|+ +++.+|+++ ++.
T Consensus 78 -------~~~~~~g~~~~~~~~~~~~~~~~~~-----~~~g~~vl~~~~~h~~~~~~~~~~G~---~~~~v~~~~--~~~ 140 (373)
T TIGR03812 78 -------YGYIVSGGTEANIQAVRAAKNLARE-----EKRTPNIIVPESAHFSFEKAAEMLGL---ELRYAPLDE--DYT 140 (373)
T ss_pred -------CeEEeccHHHHHHHHHHHHHHHHhc-----cCCCcEEEECCcchHHHHHHHHHcCC---eEEEEeeCC--CCC
Confidence 6788999999998888776542111 01345788999999999999999999 999999874 579
Q ss_pred cCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecccccccccCccc----hhhhcCCC
Q 048643 231 LSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEF----QHFIDGVE 306 (506)
Q Consensus 231 ~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~----~~~~~gi~ 306 (506)
+|+++|++++++.+ ..|+.+.++|++|.++|+++|+++|+++|+|+|||+||+++.+..... ........
T Consensus 141 ~d~~~l~~~l~~~~------~~vv~~~~~~~tG~~~~~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~ 214 (373)
T TIGR03812 141 VDVKDVEDLIDDNT------IGIVGIAGTTELGQIDDIEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLP 214 (373)
T ss_pred cCHHHHHHHHhhCc------EEEEEECCCCCCCccCCHHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCccccCC
Confidence 99999999997643 245555689999999999999999999999999999998765432110 01111123
Q ss_pred CCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCccccCCCC-CCchHHHHHHHHhch
Q 048643 307 GADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRR-FRSLKLWLVIRNYGV 385 (506)
Q Consensus 307 ~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~l~~~G~ 385 (506)
++|++++++|||+..|.++|.+++++++.+ +.+....+|+.... .+...++|. ...+.+|.+++.++.
T Consensus 215 ~~d~~~~s~~K~~~~~~~~G~~~~~~~~~~-~~l~~~~~~~~~~~----------~~~~~gt~~~~~~~~~~~~l~~l~~ 283 (373)
T TIGR03812 215 GVQSITIDPHKMGLSPIPAGGILFRSKSYL-KYLSVDAPYLTVKK----------QATITGTRSGASAAATYAVIKYLGR 283 (373)
T ss_pred CCCEEEECccccCCCcCCceEEEEeCHHHH-hhhcccCcccCCCC----------CcceEeechhHHHHHHHHHHHHhCH
Confidence 789999999999999999998888776654 33433344543211 122335554 345788999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHcCCCCc----c--ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEE
Q 048643 386 ANLRHFLRSHVNMAKLFERLVASDKRVS----P--SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYM 459 (506)
Q Consensus 386 ~g~~~~i~~~~~~a~~l~~~l~~~~~~~----p--~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~ 459 (506)
+|++++.++..+++++|++.|+++ +++ | ++|+|+..+. ..+.+.|.++|+. +
T Consensus 284 ~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~v~~~~~~~--------------------~~v~~~L~~~gi~-v 341 (373)
T TIGR03812 284 EGYRKIVAECMENTRYLVEELKKI-GFEPVIEPVLNIVAFEVDDP--------------------EEVRKKLRDRGWY-V 341 (373)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhC-CCeEEcCCCceEEEEEeCCH--------------------HHHHHHHHHCCce-e
Confidence 999999999999999999999998 454 4 8888876421 3567777777764 4
Q ss_pred eeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHH
Q 048643 460 THAVCGGIYAMRFAVGATLTEERHVMVAWTMVQE 493 (506)
Q Consensus 460 ~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~ 493 (506)
... .+..++|++++ ..+|++|+++++++|++
T Consensus 342 ~~~--~~~~~iRis~~-~~~t~edid~l~~~L~~ 372 (373)
T TIGR03812 342 SVT--RCPKALRIVVM-PHVTREHIEEFLEDLKE 372 (373)
T ss_pred ccC--CCCCEEEEEEE-CCCCHHHHHHHHHHHhh
Confidence 433 23568999996 56788899999999976
No 17
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=100.00 E-value=1.4e-31 Score=291.10 Aligned_cols=379 Identities=14% Similarity=0.094 Sum_probs=269.8
Q ss_pred CCHHHHHHHHHHHhcCCCCCCCCCCccccCCCCCCHHHHHHHHHHhhcCCCCcccc-----cChhhHHHHHHHHHHHHHH
Q 048643 70 ESMETILQDVQEHIVPGVTHWQSPNYFAYFPSSGSIAGFLGEMLSSGFNVVGFNWI-----SSPAATELENIVMDWLGQM 144 (506)
Q Consensus 70 ~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~-----~~p~~~~lE~~~~~~la~l 144 (506)
.|+.++++.+.++-..+.... + .|.|-=.. ......+.+++...++.....+. .+.+..+++.++..||+++
T Consensus 466 ~sE~e~~r~~~~L~~kn~~~~-~-~fi~lGsc-tmk~na~v~~l~~s~~ef~t~hPyqPe~~sqG~lq~i~elq~~l~el 542 (939)
T TIGR00461 466 HSETEMLRYLHRLESKDLALN-N-SMIPLGSC-TMKLNATAEMMPITWPEFSNIHPFQPSNQVEGYQELIAQLEKWLCSI 542 (939)
T ss_pred CCHHHHHHHHHHHHhcCCCcc-c-cCCCCccC-CCccCHHHHHHHhcchhhcCcCCCCchHHhHHHHHHHHHHHHHHHHH
Confidence 389999999998766664432 2 34332111 23334456666444544333223 3345889999999999999
Q ss_pred cCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecC
Q 048643 145 LKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTT 224 (506)
Q Consensus 145 ~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~ 224 (506)
+|++. .++..++|+++++++|+++|..+- ..|.. ++.+|++|..+|.+..++++..|+ +++.||++
T Consensus 543 tGmd~--------~Sl~p~aGA~gE~agL~aiR~y~~-~rge~--~R~~vlip~saHgtnPasa~~~G~---~Vv~V~~d 608 (939)
T TIGR00461 543 TGFDA--------ISLQPNSGAQGEYAGLRVIRSYHE-SRGEN--HRNICLIPVSAHGTNPASAAMAGM---QVVPVNCD 608 (939)
T ss_pred HCCCC--------cccCCchHHHHHHHHHHHHHHHHH-hcCCC--CCCEEEEEccccCcCHHHHHHCCC---EEEEeccC
Confidence 99994 468888899999999999987542 11221 567899999999999999999999 99999997
Q ss_pred CCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC-hhHHHHHHHHhCCEEEeecccccccccCccchhhhc
Q 048643 225 KSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP-LKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFID 303 (506)
Q Consensus 225 ~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp-l~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~ 303 (506)
+ +|.+|+++|+++|++ .+..+.+|++|+++| +|.++| +++|+++||++|.|++||||+..+.......
T Consensus 609 ~--~G~iDle~L~~~i~~---~~~~taaV~iT~pst-~G~~e~~I~eI~~iah~~G~~v~VDgAq~~al~~l~~P----- 677 (939)
T TIGR00461 609 Q--DGNIDLVDLKNKAEQ---HGDELAAVMVTYPST-HGVFEPTIQHACDIVHSFGGQVYLDGANMNAQVGLTSP----- 677 (939)
T ss_pred C--CCCcCHHHHHHHHhh---cCCceEEEEEEeCCc-CceecccHHHHHHHHHHcCCEEEEEecChhhCCCCCCc-----
Confidence 4 579999999999975 234577999999998 799977 9999999999999999999996644333222
Q ss_pred CCCCCCeeEEcCccccCCCCcc-----eEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCccccCCCCCCc----h
Q 048643 304 GVEGADSFSLNAHKWFFTTLDC-----CCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRS----L 374 (506)
Q Consensus 304 gi~~aDsi~~~~hK~l~~p~~~-----g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~a----l 374 (506)
+--+||++++|.||+|+.|.++ |++++|+. +...+... . +.......+.. ...+...++.++. +
T Consensus 678 g~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~--L~~~lPg~-~-v~~t~d~~gre---q~Iga~s~~~~g~a~~~l 750 (939)
T TIGR00461 678 GDLGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSH--LIPFLPKH-D-VVSMITGIGGS---KSIGSVSAAPYGSASILP 750 (939)
T ss_pred cccCCCEEEecCCccCCCCCCCCCCCeEEEEEhhh--chhhcCCC-c-ccccccCCCCc---cccccccccccCcHHHHH
Confidence 2238999999999999977766 99999964 32222111 1 11110000000 1112233344555 8
Q ss_pred HHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c-------ceEEEeecCCCcccccccccchHHHHHHHH
Q 048643 375 KLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS---P-------SAVMDKLKPKYENCHSQQLVTEEEAINEFN 444 (506)
Q Consensus 375 ~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p-------~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (506)
+.|++++.+|.+|+++..+..+.+|+|++++|++. ++ + +.++|++.+.. ++.+..+
T Consensus 751 ~a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~~--~~~l~~~~~~~~~hEfv~~~~~~~------------~~~g~~~ 816 (939)
T TIGR00461 751 ISWMYIKMMGNEGLPKASVVAILNANYMATRLKDH--YPILFVGTLKHVAHECILDLRPLK------------AKTGIEA 816 (939)
T ss_pred HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhcc--CcccccCCCCceeEEEEEeccchh------------hhcCCCH
Confidence 99999999999999999999999999999999874 44 1 44888876421 1223456
Q ss_pred HHHHHHHHhcCcEEEeee-eECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHc
Q 048643 445 RELLESINASGKAYMTHA-VCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAFLT 500 (506)
Q Consensus 445 ~~l~~~l~~~g~~~~~~~-~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l~~ 500 (506)
.++.++|++.|....+.+ ...|.-.+| ++ ..++++|||++++++.++.+++.+
T Consensus 817 ~dIakrL~d~G~hapt~~~pv~g~lmie--pT-E~eskeelD~f~~al~~I~~e~~~ 870 (939)
T TIGR00461 817 IDVAKRLQDYGFHAPTLSFPVPGTLMVE--PT-ESESLEELDRFCDAMIAIKEEINA 870 (939)
T ss_pred HHHHHHHHhCCeeccccCCccCCeEEEE--ee-ccCCHHHHHHHHHHHHHHHHHHHH
Confidence 889999999998654422 233443444 43 367889999999999999988866
No 18
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=100.00 E-value=3.6e-31 Score=278.20 Aligned_cols=399 Identities=15% Similarity=0.083 Sum_probs=266.4
Q ss_pred ChhHHhhhCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCccccCCCC-CCHHHHHHHHHHhhcCCCCccc---ccCh
Q 048643 53 EPGYLRKRLPECAPYNPESMETILQDVQEHIVPGVTHWQSPNYFAYFPSS-GSIAGFLGEMLSSGFNVVGFNW---ISSP 128 (506)
Q Consensus 53 ~p~~l~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~~~~~~~l~~~~n~~~~~~---~~~p 128 (506)
-|..++..-+..+|+ .++.++++++.+....+.... ..|.|.-... ..++.+...++......+...| ..+.
T Consensus 34 ip~~~~~~~~~~~~~--~se~~~~~~~~~l~~~n~~~~--~~~~g~G~~~~~~~p~i~~~~~~~~~~~~~tpYq~e~~sq 109 (481)
T PRK04366 34 LPEELLRKEPPELPE--VSELEVVRHYTRLSQKNYGVD--TGFYPLGSCTMKYNPKINEKVARLPGFAELHPLQPEETVQ 109 (481)
T ss_pred CCHHHhcCCCCCCCC--CCHHHHHHHHHHHHhcCCCCC--cceecCcccCCCCCHHHHHHHHhCcchhcCCCCCChhhhh
Confidence 466666555567777 899999999999777665422 2566655333 3444444444443111344566 3566
Q ss_pred hhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHH
Q 048643 129 AATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAA 208 (506)
Q Consensus 129 ~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~ 208 (506)
+..++..++.+|+++++|++. ..+..++|+.+.+.++.++|.....+ |. .++..|+++...|.+....+
T Consensus 110 G~lel~~~~~~~la~l~G~~~--------~~l~~~~GA~a~~~~l~~~r~~~~~~-Gd--~~~~~Vlv~~~~hp~~~~~~ 178 (481)
T PRK04366 110 GALELMYELQEWLKEITGMDA--------VTLQPAAGAHGELTGLLMIRAYHEAR-GD--TKRTEVIVPDSAHGTNPASA 178 (481)
T ss_pred HHHHHHHHHHHHHHHHhCCCc--------eEEEeCcHHHHHHHHHHHHHHHhhcc-Cc--CCCCEEEEcCCccHhHHHHH
Confidence 778899999999999999974 34666777777777766555432221 10 13457889999999999999
Q ss_pred HHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc-cChhHHHHHHHHhCCEEEeecc
Q 048643 209 QIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV-DPLKPLCDVAKQFGIWVHVDAA 287 (506)
Q Consensus 209 ~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i-dpl~~I~~ia~~~g~~lhVDaA 287 (506)
+..|+ +++.+|++. +|.+|+++|++++.++++ +|+++.++ ++|.+ +|+++|+++|+++|+|+|||+|
T Consensus 179 ~~~G~---~vv~v~~~~--~~~~D~e~L~~~i~~~t~------~V~v~~Pn-~tG~~~~dl~eI~~~a~~~gal~iVD~a 246 (481)
T PRK04366 179 AMAGF---KVVEIPSNE--DGLVDLEALKAAVGEDTA------ALMLTNPN-TLGLFERNILEIAEIVHEAGGLLYYDGA 246 (481)
T ss_pred HHcCC---EEEEeecCC--CCCcCHHHHHhhcccCCe------EEEEeCCC-CccccchHHHHHHHHHHHcCCEEEEEec
Confidence 99999 999999964 579999999999976543 67777776 89988 6999999999999999999999
Q ss_pred cccccccCccchhhhcCCCCCCeeEEcCccccCCCCcc-----eEEEEeCchhHHhhhcCCccccCCccccCCCccCC-C
Q 048643 288 YAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDC-----CCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDY-K 361 (506)
Q Consensus 288 ~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~-----g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~-~ 361 (506)
+..+.+..-.. +--++|++++++||||++|.++ |+++++++. .+.+ ++.+...... .....+ .
T Consensus 247 ~~~~~~g~~~~-----~~~GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~~--~~~l---p~~~v~~~g~-~~~l~~~r 315 (481)
T PRK04366 247 NLNAILGKARP-----GDMGFDVVHLNLHKTFSTPHGGGGPGSGPVGVKEEL--APFL---PVPVVEKDGD-RYRLDYDR 315 (481)
T ss_pred ChhhhcccCCc-----cccCCCEEEEechhhcCCCCCCCCCCeeeeeehhhh--HhhC---CCCeeeccCC-ceeecccc
Confidence 96543311111 1227999999999999999766 478887642 2222 1221110000 000000 1
Q ss_pred CccccCCCCCC-----chHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c--ceEEEeecCCCcccccc
Q 048643 362 DWQITLSRRFR-----SLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS---P--SAVMDKLKPKYENCHSQ 431 (506)
Q Consensus 362 ~~~~~~sr~~~-----al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p--~~v~f~~~~~~~~~~~~ 431 (506)
...+...+.+. ++++|.++..+|.+|++++.+++..+++||+++|+++..+. | ..+.|....-..
T Consensus 316 ~~~i~r~~a~t~~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~----- 390 (481)
T PRK04366 316 PKSIGRVRAFYGNFGVLVRAYAYIRSLGAEGLREVSEDAVLNANYLKARLKDIYDLPYDRPCMHEFVLSGKKLKE----- 390 (481)
T ss_pred cccCCCcccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhCcccCCCCeeEEEEEECccccc-----
Confidence 11111122222 37899999999999999999999999999999999862222 2 333333210000
Q ss_pred cccchHHHHHHHHHHHHHHHHhcCcEEEeeee-ECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHccCC
Q 048643 432 QLVTEEEAINEFNRELLESINASGKAYMTHAV-CGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAFLTTNT 503 (506)
Q Consensus 432 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l~~~~~ 503 (506)
. +....++.++|.+.|+....... ......+|++++ ..+|++|||+++++|+++.+++.+.++
T Consensus 391 ----~----g~~~~~v~~~L~~~Gi~~~~~~~p~~~~~~l~is~~-e~~t~edid~l~~~l~~i~~~~~~~~~ 454 (481)
T PRK04366 391 ----T----GVRTLDIAKRLLDYGFHPPTIYFPLIVPEALMIEPT-ETESKETLDAFIAAMKQIAEEAKENPE 454 (481)
T ss_pred ----c----CCCHHHHHHHHHHCCccCCccccccccCCeEEEccc-CCCCHHHHHHHHHHHHHHHHHHHhCcH
Confidence 0 01246678888888874321111 112457999995 678888999999999999998876654
No 19
>PRK05367 glycine dehydrogenase; Provisional
Probab=100.00 E-value=3.4e-31 Score=293.29 Aligned_cols=379 Identities=14% Similarity=0.092 Sum_probs=263.4
Q ss_pred CCHHHHHHHHHHHhcCCCCCCCCCCccccCCCCCCHHHHHHHHHHhhcCCCC--ccc---ccChhhHHHHHHHHHHHHHH
Q 048643 70 ESMETILQDVQEHIVPGVTHWQSPNYFAYFPSSGSIAGFLGEMLSSGFNVVG--FNW---ISSPAATELENIVMDWLGQM 144 (506)
Q Consensus 70 ~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~--~~~---~~~p~~~~lE~~~~~~la~l 144 (506)
.|+.++++.++++-..+.....+..++|+-. -...|.+ ++....++... +.| +.+.+..+++.++.+|++++
T Consensus 478 ~sE~e~~r~~~~l~~kn~~~~~~~i~lGsct-~~~~p~~--~~~~~~~~~f~~~hP~qp~e~~qG~l~~i~e~q~~l~el 554 (954)
T PRK05367 478 HSETEMMRYLRRLEDKDLALDRSMIPLGSCT-MKLNAAA--EMIPITWPEFANLHPFAPAEQAAGYRELIDQLEAWLAEI 554 (954)
T ss_pred CCHHHHHHHHHHHHhcCcCcccceeeCCcCC-CcCCHHH--HHHHHhCccccccCCCChHHHHHHHHHHHHHHHHHHHHH
Confidence 4899999999998777766555667788722 2222222 22222232221 122 33445788999999999999
Q ss_pred cCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecC
Q 048643 145 LKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTT 224 (506)
Q Consensus 145 ~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~ 224 (506)
+|++. ..+..+||+++++++|+++|.....+ |.. ++.+|++|+.+|.|+.+++.++|+ +++.||++
T Consensus 555 tG~d~--------~sl~~~~ga~ge~agL~a~r~~~~~~-G~~--~r~~vlis~~aH~snp~sa~~~G~---~vv~v~~d 620 (954)
T PRK05367 555 TGYDA--------VSLQPNAGAQGEYAGLLAIRAYHESR-GEG--HRDVCLIPSSAHGTNPASAVMAGM---KVVVVACD 620 (954)
T ss_pred HCCCC--------EEECccHHHHHHHHHHHHHHHHhhcc-CCC--CCCEEEEEchhhhhhHHHHHHCCC---EEEEECCC
Confidence 99974 34556678899999998887643221 221 456899999999999999999999 99999998
Q ss_pred CCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecccccccccCccchhhhcC
Q 048643 225 KSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDG 304 (506)
Q Consensus 225 ~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~g 304 (506)
. +|.+|+++|++++++. +..+++|+++.++|..+..+|+++|+++||++|+|+|||||++++.+..... +
T Consensus 621 ~--~G~iD~~~L~~~i~~~---~~~la~V~it~pst~G~~e~~I~eI~~i~h~~G~~v~VDgA~~~al~~l~~p-----g 690 (954)
T PRK05367 621 E--NGNIDLDDLRAKAEEH---ADNLAAIMITYPSTHGVFEETIREICEIVHEHGGQVYLDGANMNAQVGLARP-----G 690 (954)
T ss_pred C--CCCcCHHHHHHHHhcc---CCCeEEEEEEcCCCCeeecCCHHHHHHHHHHcCCEEEEECcChhhccCCCCh-----h
Confidence 5 4699999999999753 2247789999999884445899999999999999999999997654433221 1
Q ss_pred CCCCCeeEEcCccccCCCCcce-----EEEEeCchhHHhhhcCCccccCCccccCCCccCCCCccccCCCCC----CchH
Q 048643 305 VEGADSFSLNAHKWFFTTLDCC-----CLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRF----RSLK 375 (506)
Q Consensus 305 i~~aDsi~~~~hK~l~~p~~~g-----~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~----~al~ 375 (506)
.-+||++++|+||||+.|.|+| ++++|+. +. +|+......... +....+...+.++ .++.
T Consensus 691 ~~GADi~~~s~HK~f~~P~G~GGPg~G~l~vr~~--l~-------p~lpg~~v~~~~--~~~~~g~v~ta~~g~al~~~~ 759 (954)
T PRK05367 691 DIGADVSHLNLHKTFCIPHGGGGPGVGPIGVKAH--LA-------PFLPGHPVQIAG--GETGIGAVSAAPFGSASILPI 759 (954)
T ss_pred hcCCCEEEecCcccCCCCcCCCCCceEEEeeccc--cc-------ccCCCCccCcCC--CCCCcCcchhHHHHHHHHHHH
Confidence 2289999999999999998755 8988742 22 233221100000 0000111222222 3467
Q ss_pred HHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c-----ceEEEeecCCCcccccccccchHHHHHHHHHHH
Q 048643 376 LWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS---P-----SAVMDKLKPKYENCHSQQLVTEEEAINEFNREL 447 (506)
Q Consensus 376 ~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p-----~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l 447 (506)
.|++++.+|.+|++++.++.+.+|+|++++|++...+. | ..++|++.+... ..+..+.++
T Consensus 760 a~~yi~~~G~~Glr~~a~~~~~~A~Yl~~~L~~~~~~~~~~~~~~~~~e~i~~~~~~~~------------~~g~~~~di 827 (954)
T PRK05367 760 SWMYIRMMGAEGLRQATEVAILNANYIAKRLKDHYPVLYTGANGRVAHECILDLRPLKE------------STGITVDDI 827 (954)
T ss_pred HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccCCCCCcccceEEEeecccc------------cCCCCHHHH
Confidence 89999999999999999999999999999998752221 2 345555532100 001124678
Q ss_pred HHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHc
Q 048643 448 LESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAFLT 500 (506)
Q Consensus 448 ~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l~~ 500 (506)
.++|.+.|+...+. .+...+.+|++++ ..++++|||+++++|..+.+++.+
T Consensus 828 ~krL~d~G~~~~t~-~~pv~~~l~i~pt-E~~s~~elDr~~~al~~i~~e~~~ 878 (954)
T PRK05367 828 AKRLIDYGFHAPTM-SFPVAGTLMVEPT-ESESKAELDRFCDAMIAIRAEIDE 878 (954)
T ss_pred HHHHHHCCCeEeec-CCccCCEEEEEee-ecCCHHHHHHHHHHHHHHHHHHHH
Confidence 88888888854431 2333557899986 578888999999999999998876
No 20
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=100.00 E-value=1.2e-30 Score=256.55 Aligned_cols=336 Identities=15% Similarity=0.126 Sum_probs=246.8
Q ss_pred CccccCCCCCCHHHHHHHHH---Hhhc-CCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHH
Q 048643 94 NYFAYFPSSGSIAGFLGEML---SSGF-NVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAI 169 (506)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~l---~~~~-n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~ 169 (506)
-|+.|--..+..+.++-.++ ...+ |++. .+..+..+..+-+++++++++++|.++. ..+||+||||+|
T Consensus 3 iYlD~~ATTp~~~~v~~~m~~~~~~~fgNPsS-~H~~G~~A~~~ve~AR~~iA~llga~~~-------eIiFTSG~TEsn 74 (386)
T COG1104 3 IYLDNAATTPVDPEVLEAMLPYLTEVFGNPSS-LHSFGREARKAVEEAREQIAKLLGADPE-------EIIFTSGATESN 74 (386)
T ss_pred ccccccccCCCCHHHHHHHHHHHHhhcCCccc-hhHhHHHHHHHHHHHHHHHHHHhCCCCC-------eEEEecCCcHHH
Confidence 35665544454554443333 3333 4433 4445666677777889999999999885 899999999999
Q ss_pred HHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHh---CCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhc
Q 048643 170 LCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIV---GIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEA 246 (506)
Q Consensus 170 l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~---G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~ 246 (506)
..|+..+.....++ .++-.|++|...|.++...++.+ |+ +|.++|++. +|.+|+++|+++|++++
T Consensus 75 NlaI~g~~~a~~~~-----~~~~HIIts~iEH~aVl~~~~~Le~~g~---~Vtyl~V~~--~G~v~~e~L~~al~~~T-- 142 (386)
T COG1104 75 NLAIKGAALAYRNA-----QKGKHIITSAIEHPAVLNTCRYLERQGF---EVTYLPVDS--NGLVDLEQLEEALRPDT-- 142 (386)
T ss_pred HHHHHhhHHhhhcc-----cCCCeEEEcccccHHHHHHHHHHHhcCC---eEEEeCCCC--CCeEcHHHHHHhcCCCc--
Confidence 99988643322111 13457999999999999999999 88 999999986 57999999999999875
Q ss_pred CCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcce
Q 048643 247 GLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCC 326 (506)
Q Consensus 247 g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g 326 (506)
.+|.+.+.+|.+|.+.|+++|+++|+++|++||||++++.+-+..+-... .+|.+++++||+. .|.|+|
T Consensus 143 ----~LVSim~aNnE~G~IQpI~ei~~i~k~~~i~fHvDAvQa~Gkipi~~~~~------~vD~ls~SaHK~~-GpkGiG 211 (386)
T COG1104 143 ----ILVSIMHANNETGTIQPIAEIGEICKERGILFHVDAVQAVGKIPIDLEEL------GVDLLSFSAHKFG-GPKGIG 211 (386)
T ss_pred ----eEEEEEecccCeeecccHHHHHHHHHHcCCeEEEehhhhcCceecccccc------CcceEEeehhhcc-CCCceE
Confidence 48999999999999999999999999999999999999888776653211 5999999999965 599999
Q ss_pred EEEEeCchhHHhhhcCCccccCCccccCCCccCCCCccccCCCCCCc------hHHHHHHHHhchhHHHHHHHHHHHHHH
Q 048643 327 CLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRS------LKLWLVIRNYGVANLRHFLRSHVNMAK 400 (506)
Q Consensus 327 ~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~a------l~~~~~l~~~G~~g~~~~i~~~~~~a~ 400 (506)
++|+|+...+. +.+... +.+.++|... .++-.+++ +..+.+.....+...+.+
T Consensus 212 aLyv~~~~~~~-------p~i~GG-------------gQE~g~RsGTenv~~Ivg~~~A~~-~a~~~~~~~~~~~~~lr~ 270 (386)
T COG1104 212 ALYVRPGVRLE-------PLIHGG-------------GQERGLRSGTENVPGIVGFGKAAE-IAVEELEEENARLRKLRD 270 (386)
T ss_pred EEEECCCCccC-------ceeccC-------------cCCCCCCCCCccHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 99997654331 233222 2234444322 12222222 345667778888999999
Q ss_pred HHHHHHHcC-CCCc---------cceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeE------
Q 048643 401 LFERLVASD-KRVS---------PSAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVC------ 464 (506)
Q Consensus 401 ~l~~~l~~~-~~~~---------p~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~------ 464 (506)
+|.+.|.+. |.+. |++++|.+..-. .+.+.-.|...|+ +++.+..
T Consensus 271 ~l~~~l~~~~p~~~~~g~~~~rlP~~~~~~f~gv~------------------gE~ll~~L~~~gI-~vStGSACsS~~~ 331 (386)
T COG1104 271 RLEDGLLEIIPDVYLNGDDEPRLPNILNFSFPGVE------------------GESLLLALDLAGI-AVSTGSACSSGSL 331 (386)
T ss_pred HHHHHHHhcCCcEEEcCCcccCCCCeEEEEeCCCc------------------HHHHHHhccccCe-EEeccccccCCCC
Confidence 999999975 7665 388888886541 3455666666676 4444321
Q ss_pred --------------CCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHcc
Q 048643 465 --------------GGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAFLTT 501 (506)
Q Consensus 465 --------------~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l~~~ 501 (506)
.....+||++ +..||++||+++++.+.++.+++...
T Consensus 332 ~pShVL~AmG~~~e~a~~siR~S~-g~~tt~eei~~~~~~l~~~i~~lr~~ 381 (386)
T COG1104 332 EPSHVLRAMGISEELAHGSIRFSL-GRFTTEEEIDAAAEALKEIIKRLREL 381 (386)
T ss_pred CccHHHHHcCCChHHhCccEEEEc-CCCCCHHHHHHHHHHHHHHHHHHhhh
Confidence 1247899999 58899999999999999999887653
No 21
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.7e-30 Score=265.09 Aligned_cols=346 Identities=16% Similarity=0.146 Sum_probs=254.0
Q ss_pred CccccCCCCCCHHHHHHHHHHhhc---CCC--CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHH
Q 048643 94 NYFAYFPSSGSIAGFLGEMLSSGF---NVV--GFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEA 168 (506)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~l~~~~---n~~--~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a 168 (506)
.||.+.-++. .|..+.+.+..++ +.| ...+..+..+++.+.++++.+++++|.++.. ..+||.|+|++
T Consensus 24 vylD~aa~~~-~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~~------eIvft~~tT~a 96 (405)
T COG0520 24 VYLDNAATSQ-KPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNADSSD------EIVFTRGTTEA 96 (405)
T ss_pred EEecCccccc-CCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhCCCCCC------eEEEeCChhHH
Confidence 4555543333 4555666665543 232 2355566677889999999999999998632 79999999998
Q ss_pred HHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchH----HHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHH
Q 048643 169 ILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCA----LQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDV 244 (506)
Q Consensus 169 ~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s----~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~ 244 (506)
+.......... ++ +++.|++|...|+| |...++..|+ +++.+|+++ +|.+|.+++++.+.+.+
T Consensus 97 ln~va~~l~~~-~~-------~gdeIv~s~~EH~sn~~pw~~~~~~~Ga---~v~~i~~~~--~g~~~~~~~~~~i~~~T 163 (405)
T COG0520 97 LNLVARGLGRS-LK-------PGDEIVVSDLEHHSNIVPWQELAKRTGA---KVRVIPLDD--DGLLDLDALEKLITPKT 163 (405)
T ss_pred HHHHHHHhhhh-hc-------CCCEEEEccCcchhhHHHHHHHHHhcCc---EEEEEecCC--CCCcCHHHHHHhcCCCc
Confidence 76554443211 11 56789999999976 5566777799 999999984 57999999999887766
Q ss_pred hcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCc
Q 048643 245 EAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLD 324 (506)
Q Consensus 245 ~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~ 324 (506)
+ +|++++.+|.+|.+.|+++|+++||++|+|+.||||++.+.+..+-. .+ ++|.+.+++|||++.|.|
T Consensus 164 k------lvais~vSn~tG~~~pv~~I~~la~~~ga~v~VDaaq~~~h~~idv~-~l-----~~Df~afsgHKwl~gP~G 231 (405)
T COG0520 164 K------LVALSHVSNVTGTVNPVKEIAELAHEHGALVLVDAAQAAGHLPIDVQ-EL-----GCDFLAFSGHKWLLGPTG 231 (405)
T ss_pred e------EEEEECccccccccchHHHHHHHHHHcCCEEEEECccccCccCCCch-hc-----CCCEEEEcccccccCCCc
Confidence 5 99999999999999999999999999999999999999998877632 22 899999999999999999
Q ss_pred ceEEEEeCchhHHhhhcCCccccCCccc-c-----CCCccCCCCccccCCCC--CCchHHHHHHHHhchhHHHHHHHHHH
Q 048643 325 CCCLWVKDPSALVSSLSTNPEYLKNKAT-E-----SKQVVDYKDWQITLSRR--FRSLKLWLVIRNYGVANLRHFLRSHV 396 (506)
Q Consensus 325 ~g~~~~r~~~~l~~~~~~~~~yl~~~~~-~-----~~~~~~~~~~~~~~sr~--~~al~~~~~l~~~G~~g~~~~i~~~~ 396 (506)
+|++++|+... . .+ .++...... + ....+....+.++.+.. ..++.+-.+++.+...|+.++.++..
T Consensus 232 iGvLy~r~~~l-~-~l---~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~~i~~~e~ 306 (405)
T COG0520 232 IGVLYVRKELL-E-EL---EPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIGMEAIEAHER 306 (405)
T ss_pred eEEEEEchHHH-h-hc---CCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHHHHhHHHHHHHHH
Confidence 99999997543 1 11 233322110 0 01111122233333333 23466778888888888999999999
Q ss_pred HHHHHHHHHHHcCCCCc---c------ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECC-
Q 048643 397 NMAKLFERLVASDKRVS---P------SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGG- 466 (506)
Q Consensus 397 ~~a~~l~~~l~~~~~~~---p------~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g- 466 (506)
++++++.+.|+++|+++ | ++++|.+... ....+...|.++|+ ++.......
T Consensus 307 ~L~~~~~~~L~~~~~v~i~g~~~~~r~~~vsF~v~~~------------------~~~dv~~~L~~~gI-~vr~g~~ca~ 367 (405)
T COG0520 307 ELTEYLLEGLSELPGVEIYGPPDADRGGIVSFNVKGI------------------HPHDVATLLDEKGI-AVRAGHHCAQ 367 (405)
T ss_pred HHHHHHHHHHhcCCCeEEecCCcccCceEEEEEeCCC------------------CHHHHHHHHHhCCe-EEEecccccc
Confidence 99999999999999988 3 7899988764 14677788888894 443332211
Q ss_pred --------EEEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 048643 467 --------IYAMRFAVGATLTEERHVMVAWTMVQEQLE 496 (506)
Q Consensus 467 --------~~~lR~~~~~~~tt~edi~~li~~l~~~~~ 496 (506)
...+|+|+ ++.+|+||||+|+++|+++.+
T Consensus 368 p~~~~~~~~~~iR~S~-~~YNt~edid~l~~aL~~~~~ 404 (405)
T COG0520 368 PLHRLLGVDATIRASL-HLYNTEEDVDRLLEALKKALA 404 (405)
T ss_pred HHHHhcCCCCceEEEE-eecCCHHHHHHHHHHHHHHhh
Confidence 23399999 577888899999999998764
No 22
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.97 E-value=2.8e-28 Score=255.65 Aligned_cols=376 Identities=13% Similarity=0.084 Sum_probs=245.2
Q ss_pred CChhHHhhhCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCccccCCCCCCHHHHH------HHHHHhhcCCCCcccc
Q 048643 52 VEPGYLRKRLPECAPYNPESMETILQDVQEHIVPGVTHWQSPNYFAYFPSSGSIAGFL------GEMLSSGFNVVGFNWI 125 (506)
Q Consensus 52 ~~p~~l~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~------~~~l~~~~n~~~~~~~ 125 (506)
.-|++++...+.++|+.+ +.+++++++.+....+.....|++++|.-..+...|..+ +++++. ++++...+
T Consensus 30 ~~p~~~~~~~~~~lp~~~-~~~~v~~~~~~~~~~~~~~~~~~~~lg~g~~~~~~p~~~~~~~~~~~~~~~-y~~~~~~~- 106 (447)
T PRK00451 30 DIPEELRLKRPLDLPPGL-SEMELLRHLRELAAKNKTAEEYPSFLGAGAYDHYIPAVVDHIISRSEFYTA-YTPYQPEI- 106 (447)
T ss_pred hCCHHHHhCCCCCCCCCC-CHHHHHHHHHHHHhcCCCcCcCcccCcccccCCcCcHHHHHHHhchhHHHh-cCCCCCcc-
Confidence 357888888888999976 999999999987755555455888888322212222222 344444 44433332
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHH
Q 048643 126 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQ 205 (506)
Q Consensus 126 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 205 (506)
+++..+...+..+|+++++|++.+ .+++++|||+++. ++..++... ++..|++++..|.++.
T Consensus 107 -~~g~~~~~~e~~~~la~l~g~~~~-------~v~~~~g~t~~~~-~~~~a~~~~---------~g~~Vlv~~~~~~~~~ 168 (447)
T PRK00451 107 -SQGTLQAIFEYQTMICELTGMDVA-------NASMYDGATALAE-AALMAVRIT---------KRKKVLVSGAVHPEYR 168 (447)
T ss_pred -chHHHHHHHHHHHHHHHHhCCCcc-------eEEecCcHHHHHH-HHHHHHHhc---------CCCEEEEeCccCHHHH
Confidence 444566666677899999999875 6789999987554 444443210 4567888999999999
Q ss_pred HHHHH----hCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCE
Q 048643 206 KAAQI----VGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIW 281 (506)
Q Consensus 206 ka~~~----~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~ 281 (506)
++++. .|+ +++.+|+++ + ++|+++|+++|.+++ .+|+++.+ |++|.++|+++|+++|+++|+|
T Consensus 169 ~~~~~~~~~~G~---~~~~v~~~~--~-~~d~~~l~~~i~~~t------~~v~l~~p-n~tG~v~~l~~I~~~a~~~~~~ 235 (447)
T PRK00451 169 EVLKTYLKGQGI---EVVEVPYED--G-VTDLEALEAAVDDDT------AAVVVQYP-NFFGVIEDLEEIAEIAHAGGAL 235 (447)
T ss_pred HHHHHHHHhCCc---EEEEecCCC--C-CCCHHHHHHhcCCCe------EEEEEECC-CCCCeeCCHHHHHHHHHHCCCE
Confidence 88765 477 999999875 4 899999999996543 37777777 8899999999999999999999
Q ss_pred EEe--ecccccccccCccchhhhcCCCCCCeeEEcCccc-----cCCCCcceEEEEeCchhHHhhhcCCccccCCccccC
Q 048643 282 VHV--DAAYAGSACICPEFQHFIDGVEGADSFSLNAHKW-----FFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATES 354 (506)
Q Consensus 282 lhV--DaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~-----l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~ 354 (506)
++| |....+ .+..+ +--++|.++.++||| ++.| ++|++++++.. . ..+. +.+.......
T Consensus 236 ~iv~~d~~~~g-~~~~~-------~~~~~D~~~~s~~k~~~~~~~~Gp-g~G~l~~~~~~-~-~~~~---~~~~g~~~~~ 301 (447)
T PRK00451 236 FIVGVDPVSLG-LLKPP-------GEYGADIVVGEGQPLGIPLSFGGP-YLGFFATRKKL-V-RQMP---GRLVGETVDA 301 (447)
T ss_pred EEEEcChHHhc-cCCCc-------ccCCCCEEEECCCcCCCCCCCCCC-CchHHHhhHHH-H-hhCC---CCEeeeeccc
Confidence 998 654322 22111 112899999999997 3344 78888886532 2 2221 1110000000
Q ss_pred CCccCC----------CCc---c-ccCCCC-CCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc--c---
Q 048643 355 KQVVDY----------KDW---Q-ITLSRR-FRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS--P--- 414 (506)
Q Consensus 355 ~~~~~~----------~~~---~-~~~sr~-~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~--p--- 414 (506)
.+...+ ..+ + ..+++. ..++..+.+++.++.+|++++.++..++++++.+.|+++++++ +
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~ 381 (447)
T PRK00451 302 DGKRGFVLTLQAREQHIRREKATSNICTNQALNALAAAIYMSLLGPEGLRELAEQNHQKAHYLAERLAEIGGVELFDGPF 381 (447)
T ss_pred CCCeeeEeeccccccccccccccccccccHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHhhcCCEEecCCCe
Confidence 000000 000 0 001110 1124555567778999999999999999999999999988776 2
Q ss_pred -ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEE-E--eeeeECCEEEEEEEecCCCCCHHHHHHHHHH
Q 048643 415 -SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAY-M--THAVCGGIYAMRFAVGATLTEERHVMVAWTM 490 (506)
Q Consensus 415 -~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~-~--~~~~~~g~~~lR~~~~~~~tt~edi~~li~~ 490 (506)
..+++++... ..++.++|.++|++. + ++.......++|++++ ..+|+++|++++++
T Consensus 382 ~~~~~v~~~~~-------------------~~~~~~~L~~~gi~~~~~~~~~~~~~~~~~rvs~~-~~~t~e~i~~l~~~ 441 (447)
T PRK00451 382 FNEFVVRLPKP-------------------AEEVNEALLEKGILGGYDLGRYYPELGNHLLVCVT-EKRTKEDIDALVAA 441 (447)
T ss_pred EEEEEEecCCC-------------------HHHHHHHHHhcCCCCCcccccccCCcCCEEEEecC-CCCCHHHHHHHHHH
Confidence 2234443211 245677777777641 1 1111111358999985 56788899999999
Q ss_pred HHHHH
Q 048643 491 VQEQL 495 (506)
Q Consensus 491 l~~~~ 495 (506)
|+++.
T Consensus 442 L~~~~ 446 (447)
T PRK00451 442 LGEVL 446 (447)
T ss_pred HHHHh
Confidence 98753
No 23
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.97 E-value=5.2e-28 Score=247.74 Aligned_cols=295 Identities=15% Similarity=0.142 Sum_probs=208.9
Q ss_pred CCCCCCCCCHHHHHHHHHHHhcCCCCCCCC--------C---------CccccCCCCCCHHHHHHHHHHhhcCCCCcccc
Q 048643 63 ECAPYNPESMETILQDVQEHIVPGVTHWQS--------P---------NYFAYFPSSGSIAGFLGEMLSSGFNVVGFNWI 125 (506)
Q Consensus 63 ~~~p~~~~~~~~il~~~~~~~~~~~~~~~~--------p---------~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~ 125 (506)
..+|++|-+.+.|...|.+.-.-...+|.+ . |+||+..+ ...-+ +++ ..+..-.
T Consensus 28 ~~~p~~g~~~~~i~~~l~~l~~~~~~~~~~~~~~gere~rv~~~~~~~~~~~~~hg-igr~~---~l~-----~~q~ka~ 98 (444)
T TIGR03531 28 RKIPEEGWDDETIELFLHELSVMDTNNFPNNVGVGEREGRVFSKLVARRHYRFCHG-IGRSG---DLV-----APQPKAA 98 (444)
T ss_pred CcCCccCCCHHHHHHHHHHHhcCCcCCCccccCcCcccceeechhhhhcccceecC-CCCcc---ccc-----ccCcccc
Confidence 468999999999888887754433333321 1 22222221 00000 000 0011223
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCch-HHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHH
Q 048643 126 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTC-EAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCAL 204 (506)
Q Consensus 126 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt-~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~ 204 (506)
.++....++.++..|+++++|.+... .++++++|| +++.++|.+++.+. .++..|+++..+|.|+
T Consensus 99 gss~~~~l~~~~e~~~~~~~G~~~~~------~a~~v~~~Tg~al~laL~alr~~~--------~~gd~VI~p~~th~S~ 164 (444)
T TIGR03531 99 GSSLLYKLTNKLVKDFLKLLGLRSIK------SAFVVPLATGMSLSLCLSALRHKR--------PKAKYVIWPRIDQKSC 164 (444)
T ss_pred CccHHHHHHHHHHHHHHHHcCCCCCC------EEEEECCHHHHHHHHHHHHcCCcC--------CCCCEEEEECcChHHH
Confidence 45678889999999999999998432 478889999 78888888776421 0233556666889999
Q ss_pred HHHHHHhCCCCCCeEEEecC-CCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEE
Q 048643 205 QKAAQIVGIDLKNFRAIKTT-KSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVH 283 (506)
Q Consensus 205 ~ka~~~~G~g~~~v~~v~~~-~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lh 283 (506)
.|++.++|+ +++.||+. +++++.||+++|+++|++.. ...+.+|+.+.+++..|..||+++|+++|++||+|+|
T Consensus 165 ~kAi~~~G~---~pv~Vd~~~d~~~~~iD~e~Le~aIt~~~--~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~lI 239 (444)
T TIGR03531 165 IKAISTAGF---EPRVIETVLDGDELTTDVEDIERAIEEIG--PDNILCVLSTTSCFAPRSPDDIEEIAKICANYDIPHI 239 (444)
T ss_pred HHHHHHcCC---eEEEeeeeecCcCCCcCHHHHHHHHHhcc--CCCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCEEE
Confidence 999999999 99999952 23468999999999998532 1335556666666677799999999999999999999
Q ss_pred eecccccccccCccchhhh-cCC--CCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCC
Q 048643 284 VDAAYAGSACICPEFQHFI-DGV--EGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDY 360 (506)
Q Consensus 284 VDaA~gg~~~~~~~~~~~~-~gi--~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~ 360 (506)
||+|||... +.+.+.. .++ +++|++++|+||++.+|.++|++++++++... .+.. .|....
T Consensus 240 vDaAyg~~~---~~~~~~~~~g~~~Grad~vv~s~hK~l~~pg~Gg~I~~~d~el~~-~i~~--~y~g~~---------- 303 (444)
T TIGR03531 240 VNNAYGLQS---NKYMELINKAIKVGRVDAVVSSTDKNFMVPVGGAIIYSFDENFIQ-EISK--SYPGRA---------- 303 (444)
T ss_pred EECcCcCcC---hhhhhhhhccccccCCCeEEEeCccCCCCCCCEEEEEECCHHHHH-HHHH--hccCCC----------
Confidence 999998633 2223322 232 36899999999999999999999998887653 3321 121100
Q ss_pred CCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcC
Q 048643 361 KDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASD 409 (506)
Q Consensus 361 ~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~ 409 (506)
....++++|+++..+|.+++++++++..++++++.+.|+++
T Consensus 304 --------~~s~~~~~~~~ll~~G~~g~~~li~~~~~~a~~l~~~L~~l 344 (444)
T TIGR03531 304 --------SASPSLDVLITLLSLGSKGYLELLKERKEMYKYLKELLQKL 344 (444)
T ss_pred --------CChHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11246889999999999999999999999999999999875
No 24
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.96 E-value=7.1e-27 Score=239.99 Aligned_cols=308 Identities=12% Similarity=0.109 Sum_probs=218.2
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHH
Q 048643 127 SPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQK 206 (506)
Q Consensus 127 ~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~k 206 (506)
++....+.+++++++++++|.+.+ ..++|+|+|+++..++....... + ++.+|+++...|+++..
T Consensus 37 ~~~~~~~~~~~r~~la~~~g~~~~-------~i~~t~~~t~a~~~al~~~~~~~-~-------~~~~vv~~~~~~~s~~~ 101 (379)
T TIGR03402 37 GGEVGKAVEEAREQVAKLLGAEPD-------EIIFTSGGTESDNTAIKSALAAQ-P-------EKRHIITTAVEHPAVLS 101 (379)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCC-------eEEEeCcHHHHHHHHHHHHHHhc-C-------CCCeEEEcccccHHHHH
Confidence 345567777899999999998754 68999999999988887664320 0 34578888899988775
Q ss_pred HHHH---hCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEE
Q 048643 207 AAQI---VGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVH 283 (506)
Q Consensus 207 a~~~---~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lh 283 (506)
.... .|+ +++.||+++ ++.+|+++|+++++++ +.+|+++..+|++|.+.|+++|+++|+++|+++|
T Consensus 102 ~~~~~~~~G~---~v~~v~~~~--~g~~~~~~l~~~i~~~------~~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vi 170 (379)
T TIGR03402 102 LCQHLEKQGY---KVTYLPVDE--EGRLDLEELRAAITDD------TALVSVMWANNETGTIFPIEEIGEIAKERGALFH 170 (379)
T ss_pred HHHHHHHcCC---EEEEEccCC--CCcCCHHHHHHhcCCC------cEEEEEEcccCCeeecccHHHHHHHHHHcCCEEE
Confidence 5443 488 999999875 4689999999998654 3488889999999999999999999999999999
Q ss_pred eecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCc
Q 048643 284 VDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDW 363 (506)
Q Consensus 284 VDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~ 363 (506)
||++++.+....+-. . .++|++++++|| ++.|.|+|++++++...+ . +++..... ..
T Consensus 171 vD~~~~~g~~~~~~~-~-----~~~D~~~~s~~K-~~gp~G~g~l~v~~~~~~------~-p~~~g~~~---------~~ 227 (379)
T TIGR03402 171 TDAVQAVGKIPIDLK-E-----MNIDMLSLSGHK-LHGPKGVGALYIRKGTRF------R-PLLRGGHQ---------ER 227 (379)
T ss_pred EECcccccccccCcc-c-----CCCCEEEEcHHH-cCCCCceEEEEECCCCCC------C-CcccCCcc---------CC
Confidence 999998765544321 1 279999999999 677999999999864321 1 12211100 00
Q ss_pred ccc-CCCCC-CchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHc-CCCCc---c------ceEEEeecCCCcccccc
Q 048643 364 QIT-LSRRF-RSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVAS-DKRVS---P------SAVMDKLKPKYENCHSQ 431 (506)
Q Consensus 364 ~~~-~sr~~-~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~-~~~~~---p------~~v~f~~~~~~~~~~~~ 431 (506)
..+ ++... ..+.+..+++.. .++++++.++..++++++.+.|++ +++++ + +++.|.+....
T Consensus 228 ~~~~gt~~~~~~~~l~~al~~~-~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 300 (379)
T TIGR03402 228 GRRAGTENVPGIVGLGKAAELA-TEHLEEENTRVRALRDRLEAGLLARIPDARLNGDPTKRLPNTVNISFEYIE------ 300 (379)
T ss_pred CcCCCCccHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEeCCCccCCCCEEEEEecCCC------
Confidence 011 11111 113333444443 457788888999999999999985 77765 1 46777764321
Q ss_pred cccchHHHHHHHHHHHHHHHHhcCcEEEeeeeE--------------------CCEEEEEEEecCCCCCHHHHHHHHHHH
Q 048643 432 QLVTEEEAINEFNRELLESINASGKAYMTHAVC--------------------GGIYAMRFAVGATLTEERHVMVAWTMV 491 (506)
Q Consensus 432 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~--------------------~g~~~lR~~~~~~~tt~edi~~li~~l 491 (506)
..++.+.|.+.|+. +..... ...+.+|+|+ ++.+|++|||++++.|
T Consensus 301 ------------~~~~~~~l~~~gI~-v~~g~~c~~~~~~~~~~~~~lg~~~~~~~~~vR~S~-~~~~t~~di~~~~~~l 366 (379)
T TIGR03402 301 ------------GEAILLLLDMEGIC-ASSGSACTSGSLEPSHVLRAMGVPHTAAHGSIRFSL-SRYNTEEDIDYVLEVL 366 (379)
T ss_pred ------------HHHHHHhhccCCEE-EEchhhcCCCCCCcCHHHHHcCCChhhcCceEEEEc-CCCCCHHHHHHHHHHH
Confidence 24566666666764 332210 0136899999 5788899999999999
Q ss_pred HHHHHHHHccCCCC
Q 048643 492 QEQLEAFLTTNTPF 505 (506)
Q Consensus 492 ~~~~~~l~~~~~~~ 505 (506)
+++.+.+.+.. ||
T Consensus 367 ~~~~~~~~~~~-~~ 379 (379)
T TIGR03402 367 PPIIARLRAMS-PF 379 (379)
T ss_pred HHHHHHHHhhc-CC
Confidence 99988765433 54
No 25
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.96 E-value=9.6e-27 Score=238.50 Aligned_cols=312 Identities=14% Similarity=0.125 Sum_probs=220.2
Q ss_pred ccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCch
Q 048643 123 NWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHC 202 (506)
Q Consensus 123 ~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~ 202 (506)
.+..++.......++.+++++++|.+... ..++|+|+|+++..++.+..... .++..|+++..+|+
T Consensus 34 ~~~~~~~~~~~~~~~~~~la~~~~~~~~~------~v~~~~g~t~a~~~~~~~l~~~~--------~~g~~vl~~~~~~~ 99 (373)
T cd06453 34 VHELSARATDAYEAAREKVARFINAPSPD------EIIFTRNTTEAINLVAYGLGRAN--------KPGDEIVTSVMEHH 99 (373)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhCCCCCC------eEEEeCCHHHHHHHHHHHhhhcC--------CCCCEEEECcchhH
Confidence 44556677788888999999999987321 67899999999877776654310 13456888999998
Q ss_pred HH----HHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHh
Q 048643 203 AL----QKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQF 278 (506)
Q Consensus 203 s~----~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~ 278 (506)
+. .+.++..|+ +++.||++. ++.+|+++|++++.++ +.+|+++.++|++|.++|+++|+++|+++
T Consensus 100 ~~~~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~l~~~------~~~v~~~~~~~~tG~~~~~~~i~~~~~~~ 168 (373)
T cd06453 100 SNIVPWQQLAERTGA---KLKVVPVDD--DGQLDLEALEKLLTER------TKLVAVTHVSNVLGTINPVKEIGEIAHEA 168 (373)
T ss_pred HHHHHHHHHHhhcCc---EEEEeecCC--CCCcCHHHHHHHhcCC------ceEEEEeCcccccCCcCCHHHHHHHHHHc
Confidence 85 345567788 999999874 5699999999999763 34788999999999999999999999999
Q ss_pred CCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCC---
Q 048643 279 GIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESK--- 355 (506)
Q Consensus 279 g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~--- 355 (506)
|+|+|+|++|+.+....+ ... .++|++++++|||++. .++|++++++. .+ +.+. .+.........
T Consensus 169 ~~~li~D~a~~~~~~~~~-~~~-----~~~d~~~~s~~K~~~~-~g~g~~~~~~~-~~-~~~~---~~~~g~~~~~~~~~ 236 (373)
T cd06453 169 GVPVLVDGAQSAGHMPVD-VQD-----LGCDFLAFSGHKMLGP-TGIGVLYGKEE-LL-EEMP---PYGGGGEMIEEVSF 236 (373)
T ss_pred CCEEEEEhhhhcCceeee-ccc-----cCCCEEEeccccccCC-CCcEEEEEchH-Hh-hcCC---CeecCCCccccccc
Confidence 999999999976654332 111 1689999999999987 78898888653 22 2222 11111000000
Q ss_pred CccCCC--CccccC-CCC-CCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c-----ceEEEeecC
Q 048643 356 QVVDYK--DWQITL-SRR-FRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS---P-----SAVMDKLKP 423 (506)
Q Consensus 356 ~~~~~~--~~~~~~-sr~-~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p-----~~v~f~~~~ 423 (506)
....+. ...+.. +.. ...+++|.+++.+..+|++++.++..++++++.+.|+++++++ + ++++|++..
T Consensus 237 ~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (373)
T cd06453 237 EETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSEIPGVRVYGDAEDRAGVVSFNLEG 316 (373)
T ss_pred cccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCccccCCeEEEEECC
Confidence 000000 001111 111 2346788899999888999999999999999999999998776 1 678887643
Q ss_pred CCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeE---------CCEEEEEEEecCCCCCHHHHHHHHHHH
Q 048643 424 KYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVC---------GGIYAMRFAVGATLTEERHVMVAWTMV 491 (506)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~---------~g~~~lR~~~~~~~tt~edi~~li~~l 491 (506)
. ...++.++|.+.|+. +.+... ....++|+++. +.+|++|||+++++|
T Consensus 317 ~------------------~~~~i~~~l~~~gi~-i~~g~~~~~~~~~~~~~~~~iRis~~-~~~t~~di~~~~~~l 373 (373)
T cd06453 317 I------------------HPHDVATILDQYGIA-VRAGHHCAQPLMRRLGVPGTVRASFG-LYNTEEEIDALVEAL 373 (373)
T ss_pred c------------------CHHHHHHHHHHCCEE-eccCccchhHHHHHhCCCCeEEEEec-CCCCHHHHHHHHhhC
Confidence 2 124667777777764 332211 12468999994 778888999999864
No 26
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.96 E-value=1.5e-26 Score=237.31 Aligned_cols=305 Identities=11% Similarity=0.118 Sum_probs=216.9
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHH----
Q 048643 131 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQK---- 206 (506)
Q Consensus 131 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~k---- 206 (506)
.....++.+++++++|.+... ..++++|+|+++..++.+... ++..|+++...|.++..
T Consensus 43 ~~~~~~~~~~la~~~~~~~~~------~v~~~~g~t~al~~~~~~~~~-----------~gd~vl~~~~~~~~~~~~~~~ 105 (376)
T TIGR01977 43 SREVEETRQLLAKLFNAPSSA------HVVFTNNATTALNIALKGLLK-----------EGDHVITTPMEHNSVARPLEC 105 (376)
T ss_pred HHHHHHHHHHHHHHhCcCCCC------eEEEeCCHHHHHHHHHHhccC-----------CCCEEEECcchhhHHHHHHHH
Confidence 456667889999999986542 678999999888766554211 55678888889987653
Q ss_pred HHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeec
Q 048643 207 AAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDA 286 (506)
Q Consensus 207 a~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDa 286 (506)
.++..|. +++.++.++ ++.+|+++|++++++. +.+|+++.++|++|.+.|+++|+++|+++|++++||+
T Consensus 106 ~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~~~~~------~~~v~~~~~~n~tG~~~~~~~i~~l~~~~~~~livD~ 174 (376)
T TIGR01977 106 LKEQIGV---EITIVKCDN--EGLISPERIKRAIKTN------TKLIVVSHASNVTGTILPIEEIGELAQENGIFFILDA 174 (376)
T ss_pred HHHHcCc---EEEEEecCC--CCCcCHHHHHHhcCCC------CeEEEEECCCCCccccCCHHHHHHHHHHcCCEEEEEh
Confidence 4556688 999999875 4689999999998643 4588899999999999999999999999999999999
Q ss_pred ccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCcccc
Q 048643 287 AYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQIT 366 (506)
Q Consensus 287 A~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~ 366 (506)
|++.+....+... .++|++++++|||++.|.|+|+++++++..+.........+-.. ..+ ........++
T Consensus 175 a~~~g~~~~~~~~------~~~D~~~~s~~K~l~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~r~~ 244 (376)
T TIGR01977 175 AQTAGVIPIDMTE------LAIDMLAFTGHKGLLGPQGTGGLYIREGIKLKPLKSGGTGSHSA-LID---QPSELPDRFE 244 (376)
T ss_pred hhccCccCCCchh------cCCCEEEecccccccCCCCceEEEEcCCcCcCceecCCCccccc-ccc---ccccchhhcc
Confidence 9987766543211 27999999999999999999999998875322111110000000 000 0000000111
Q ss_pred C-CCC-CCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c-------ceEEEeecCCCccccccccc
Q 048643 367 L-SRR-FRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS---P-------SAVMDKLKPKYENCHSQQLV 434 (506)
Q Consensus 367 ~-sr~-~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p-------~~v~f~~~~~~~~~~~~~~~ 434 (506)
. +.. ...+.++.+++.+...|++.+.+++.++++++.+.|.+.++++ | ++++|+.....
T Consensus 245 ~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--------- 315 (376)
T TIGR01977 245 SGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEKLLNGLREINKVKIYGPADPANRVGVVSFTVEGID--------- 315 (376)
T ss_pred CCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCccccCCeEEEEECCCC---------
Confidence 1 111 1235677788888888999999999999999999999888766 2 57888874321
Q ss_pred chHHHHHHHHHHHHHHHHhc-CcEEEeeeeE-----------CCEEEEEEEecCCCCCHHHHHHHHHHHHH
Q 048643 435 TEEEAINEFNRELLESINAS-GKAYMTHAVC-----------GGIYAMRFAVGATLTEERHVMVAWTMVQE 493 (506)
Q Consensus 435 ~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~-----------~g~~~lR~~~~~~~tt~edi~~li~~l~~ 493 (506)
..++.+.|.+. |+ .+..... .....+|+++ +..+|++||++++++|++
T Consensus 316 ---------~~~~~~~L~~~~gi-~v~~g~~~~~~~~~~~g~~~~~~iRis~-~~~~t~~dv~~~~~~l~~ 375 (376)
T TIGR01977 316 ---------SEEVADILDEKFDI-ATRTGLHCAPLAHKTIGTFATGTIRLSL-GYFNTEEEIEKLLEALSE 375 (376)
T ss_pred ---------HHHHHHHHhccCCE-EEEcccccchHHHHHhCCCCCCeEEEec-CCCCCHHHHHHHHHHHhh
Confidence 24567777766 64 3433221 1346899998 578888899999999975
No 27
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.95 E-value=5.3e-26 Score=235.59 Aligned_cols=346 Identities=16% Similarity=0.112 Sum_probs=234.0
Q ss_pred CccccCCCCCCHHHHHHHHHHhhc-----CCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHH
Q 048643 94 NYFAYFPSSGSIAGFLGEMLSSGF-----NVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEA 168 (506)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~l~~~~-----n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a 168 (506)
-||.+-..++.+..++ +.+..++ |.....+..++.......++++.+++++|.++. ...++|+|+|++
T Consensus 25 iYld~a~~~~~~~~v~-~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~------~~v~~t~g~t~~ 97 (406)
T PRK09295 25 AYLDSAASAQKPSQVI-DAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINARSA------EELVFVRGTTEG 97 (406)
T ss_pred EEEeCcccccCCHHHH-HHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCcCCC------CeEEEeCCHHHH
Confidence 5777765555544443 4333333 222223344555667777788999999998432 168999999998
Q ss_pred HHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHH----HHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHH
Q 048643 169 ILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCAL----QKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDV 244 (506)
Q Consensus 169 ~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~----~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~ 244 (506)
+..++.......++ ++..|+++...|.+. ...++..|+ +++.+|+++ ++.+|+++|+++++++
T Consensus 98 l~~~~~~~~~~~~~-------~gd~vl~~~~~~~s~~~~~~~~~~~~g~---~v~~v~~~~--~~~~d~~~l~~~i~~~- 164 (406)
T PRK09295 98 INLVANSWGNSNVR-------AGDNIIISEMEHHANIVPWQMLCARVGA---ELRVIPLNP--DGTLQLETLPALFDER- 164 (406)
T ss_pred HHHHHHHhhhhcCC-------CcCEEEECcchhhHHHHHHHHHHHHcCc---EEEEEecCC--CCCCCHHHHHHhcCCC-
Confidence 77665543211111 456788888888754 456677898 999999875 4689999999998654
Q ss_pred hcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCc
Q 048643 245 EAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLD 324 (506)
Q Consensus 245 ~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~ 324 (506)
+.+|++++++|++|.+.|+++|+++|+++|++++||++|+.+....+- .. .++|.++.++||+ +.|.|
T Consensus 165 -----t~lv~l~~~~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~~~~~-~~-----~~~D~~~~s~~K~-~gp~G 232 (406)
T PRK09295 165 -----TRLLAITHVSNVLGTENPLAEMIALAHQHGAKVLVDGAQAVMHHPVDV-QA-----LDCDFYVFSGHKL-YGPTG 232 (406)
T ss_pred -----cEEEEEecchhcccccCCHHHHHHHHHHcCCEEEEEcccccCccccCc-hh-----cCCCEEEeehhhc-cCCCC
Confidence 348999999999999999999999999999999999999776554331 11 1689999999995 55889
Q ss_pred ceEEEEeCchhHHhhhcCCccccCCccc-c---CCCccCC--CCccccCC-CCC-CchHHHHHHHHhchhHHHHHHHHHH
Q 048643 325 CCCLWVKDPSALVSSLSTNPEYLKNKAT-E---SKQVVDY--KDWQITLS-RRF-RSLKLWLVIRNYGVANLRHFLRSHV 396 (506)
Q Consensus 325 ~g~~~~r~~~~l~~~~~~~~~yl~~~~~-~---~~~~~~~--~~~~~~~s-r~~-~al~~~~~l~~~G~~g~~~~i~~~~ 396 (506)
+|++++++.. + +.+ +++...... . ......+ ....++.+ ... ..+.+..+++.+...|++++.++..
T Consensus 233 ~G~l~~~~~~-~-~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~ 307 (406)
T PRK09295 233 IGILYVKEAL-L-QEM---PPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAEYEQ 307 (406)
T ss_pred cEEEEEchHh-H-hhC---CCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence 9999997642 2 122 222221100 0 0000000 01112222 221 2367777888777778888889999
Q ss_pred HHHHHHHHHHHcCCCCc---c----ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeE-----
Q 048643 397 NMAKLFERLVASDKRVS---P----SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVC----- 464 (506)
Q Consensus 397 ~~a~~l~~~l~~~~~~~---p----~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~----- 464 (506)
++++++.+.|+++++++ | ++++|.+.... ...+.+.|.+.|+. +.....
T Consensus 308 ~l~~~l~~~l~~~~~~~~~~~~~~~~iv~~~~~~~~------------------~~~~~~~L~~~gI~-v~~g~~c~~~~ 368 (406)
T PRK09295 308 NLMHYALSQLESVPDLTLYGPQNRLGVIAFNLGKHH------------------AYDVGSFLDNYGIA-VRTGHHCAMPL 368 (406)
T ss_pred HHHHHHHHHHhcCCCEEEeCCCCCceEEEEEECCcC------------------HHHHHHHHHhCCeE-EeccccchHHH
Confidence 99999999999998877 3 78899875321 23455566666764 332211
Q ss_pred ----CCEEEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 048643 465 ----GGIYAMRFAVGATLTEERHVMVAWTMVQEQLE 496 (506)
Q Consensus 465 ----~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~ 496 (506)
....++|+|+ ++.+|++|||+++++|+++.+
T Consensus 369 ~~~~~~~~~iRiS~-~~ynt~~did~l~~~l~~i~~ 403 (406)
T PRK09295 369 MAYYNVPAMCRASL-AMYNTHEEVDRLVAGLQRIHR 403 (406)
T ss_pred HHHHCCCCEEEEEc-cCCCCHHHHHHHHHHHHHHHH
Confidence 1135799999 588899999999999998865
No 28
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.95 E-value=6.7e-26 Score=234.67 Aligned_cols=348 Identities=15% Similarity=0.118 Sum_probs=232.1
Q ss_pred CccccCCCCCCHHHHHHHHHHhhcC-----CCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHH
Q 048643 94 NYFAYFPSSGSIAGFLGEMLSSGFN-----VVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEA 168 (506)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~l~~~~n-----~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a 168 (506)
.||++-..++.+.. +.+.+..++. .....+..++.....-.++.+.+++++|.+.. ...++++|+|++
T Consensus 20 ~yld~~~~~~~p~~-v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~~~~~------~~v~~~~g~t~~ 92 (403)
T TIGR01979 20 VYLDSAATSQKPQQ-VIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFINAASD------EEIVFTRGTTES 92 (403)
T ss_pred EEEeCccccCCCHH-HHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCcCCC------CeEEEeCCHHHH
Confidence 45555444433333 3444444432 22222333344555666788999999999732 168999999988
Q ss_pred HHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHH----HHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHH
Q 048643 169 ILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCAL----QKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDV 244 (506)
Q Consensus 169 ~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~----~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~ 244 (506)
+..++.+......+ ++..|+++...|+|. .+.++..|+ +++.+|+++ ++.+|++.|++++.+.
T Consensus 93 l~~~~~~~~~~~~~-------~g~~vl~~~~~~~s~~~~~~~~~~~~g~---~~~~v~~~~--~~~~~~~~l~~~i~~~- 159 (403)
T TIGR01979 93 INLVAYSWGDSNLK-------AGDEIVISEMEHHANIVPWQLLAERTGA---TLKFIPLDD--DGTLDLDDLEKLLTEK- 159 (403)
T ss_pred HHHHHHHhhhhcCC-------CCCEEEECcchhhHHHHHHHHHHHhcCc---EEEEEecCC--CCCCCHHHHHHHhccC-
Confidence 76655543221111 466788999998874 356677888 999999884 5689999999998654
Q ss_pred hcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCc
Q 048643 245 EAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLD 324 (506)
Q Consensus 245 ~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~ 324 (506)
+.+|+++++++++|.+.|+++|+++|++||+++|||++|+.+....+- . .. ++|.++.++||++ .|.|
T Consensus 160 -----~~lv~~~~~~~~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~g~~~~~~-~----~~-~~d~~~~s~~K~~-gp~G 227 (403)
T TIGR01979 160 -----TKLVAITHVSNVLGTVNPVEEIAKLAHQVGAKVLVDGAQAVPHMPVDV-Q----AL-DCDFYVFSGHKMY-GPTG 227 (403)
T ss_pred -----CeEEEEEcccccccccCCHHHHHHHHHHcCCEEEEEchhhcCccccCc-c----cc-CCCEEEEeccccc-CCCC
Confidence 448899999999999999999999999999999999999876543321 1 11 6899999999976 4889
Q ss_pred ceEEEEeCchhHHhhhcCCccccCCccccC-----CCccCCCCccccCCCC-C-CchHHHHHHHHhchhHHHHHHHHHHH
Q 048643 325 CCCLWVKDPSALVSSLSTNPEYLKNKATES-----KQVVDYKDWQITLSRR-F-RSLKLWLVIRNYGVANLRHFLRSHVN 397 (506)
Q Consensus 325 ~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~-----~~~~~~~~~~~~~sr~-~-~al~~~~~l~~~G~~g~~~~i~~~~~ 397 (506)
+|++++++. .+ ..+. ++........ ...+....+.++.+.+ . ..+.++.+++.+...|++++.++..+
T Consensus 228 ~g~l~~~~~-~~-~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~~~~~~~~ 302 (403)
T TIGR01979 228 IGVLYGKEE-LL-EQMP---PFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENIEAHEHE 302 (403)
T ss_pred ceEEEEchH-HH-hcCC---CeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence 999998753 22 2221 1221100000 0000000111222221 1 23567777877766788899999999
Q ss_pred HHHHHHHHHHcCCCCc---c-------ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeee----
Q 048643 398 MAKLFERLVASDKRVS---P-------SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAV---- 463 (506)
Q Consensus 398 ~a~~l~~~l~~~~~~~---p-------~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~---- 463 (506)
+++++.+.|+++++++ | ++++|++.+.. ..++.+.|.+.|+. +....
T Consensus 303 l~~~l~~~l~~~~g~~~~~~~~~~~~~~~v~~~~~~~~------------------~~~~~~~L~~~gI~-v~~g~~~~~ 363 (403)
T TIGR01979 303 LTAYALERLGEIPGLRIYGPRDAEDRGGIISFNVEGVH------------------PHDVGTILDEEGIA-VRSGHHCAQ 363 (403)
T ss_pred HHHHHHHHHhcCCCEEEeCCCCccccCceEEEEeCCcC------------------HHHHHHHHhhCCEE-EcchhhhhH
Confidence 9999999999988877 2 58888874320 23455667677763 43221
Q ss_pred -----ECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 048643 464 -----CGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAF 498 (506)
Q Consensus 464 -----~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l 498 (506)
+....++|+++ ++.++++||++++++|+++.+.+
T Consensus 364 ~~~~~~~~~~~iRiS~-~~~~t~~di~~l~~~l~~~~~~~ 402 (403)
T TIGR01979 364 PLMRRFGVPATCRASF-YIYNTEEDIDALVEALKKVRKFF 402 (403)
T ss_pred HHHHHhCCCCEEEEEe-ccCCCHHHHHHHHHHHHHHHHHh
Confidence 11245899998 47789999999999999887764
No 29
>PLN02651 cysteine desulfurase
Probab=99.95 E-value=4.4e-26 Score=232.75 Aligned_cols=291 Identities=12% Similarity=0.102 Sum_probs=207.1
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHH
Q 048643 127 SPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQK 206 (506)
Q Consensus 127 ~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~k 206 (506)
++...++.+++.+.+++++|.+.+ ..++++|+|+++..++..+.....+ ++..|+++...|+++..
T Consensus 38 ~~~~~~~~~~~r~~la~~~g~~~~-------~v~~t~~~t~a~~~~l~~~~~~~~~-------~g~~vl~~~~~h~s~~~ 103 (364)
T PLN02651 38 GWESEDAVEKARAQVAALIGADPK-------EIIFTSGATESNNLAIKGVMHFYKD-------KKKHVITTQTEHKCVLD 103 (364)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCC-------eEEEeCCHHHHHHHHHHHHHHhccC-------CCCEEEEcccccHHHHH
Confidence 345567777889999999998764 6899999999998888776543211 45678889999998766
Q ss_pred HHH---HhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEE
Q 048643 207 AAQ---IVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVH 283 (506)
Q Consensus 207 a~~---~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lh 283 (506)
.+. ..|+ +++.+|+++ ++.+|+++|+++|++++ .+|++++.++++|.+.|+++|+++|+++|+|+|
T Consensus 104 ~~~~~~~~g~---~v~~v~~~~--~~~~d~~~l~~~i~~~t------~lv~v~~~~n~tG~~~~l~~I~~~~~~~g~~~~ 172 (364)
T PLN02651 104 SCRHLQQEGF---EVTYLPVKS--DGLVDLDELAAAIRPDT------ALVSVMAVNNEIGVIQPVEEIGELCREKKVLFH 172 (364)
T ss_pred HHHHHHhcCC---EEEEEccCC--CCcCCHHHHHHhcCCCc------EEEEEECCCCCceecccHHHHHHHHHHcCCEEE
Confidence 554 3477 899999874 46899999999997643 488999999999999999999999999999999
Q ss_pred eecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCc
Q 048643 284 VDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDW 363 (506)
Q Consensus 284 VDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~ 363 (506)
||++++.+....+-. .+ ++|++++++||| +.|.|+|+++++++... . ..+.+.... .. . .+
T Consensus 173 vD~a~~~g~~~~~~~-----~~-~~D~~~~s~hK~-~gp~G~g~l~v~~~~~~--~--l~p~~~g~~-~~------~-~~ 233 (364)
T PLN02651 173 TDAAQAVGKIPVDVD-----DL-GVDLMSISGHKI-YGPKGVGALYVRRRPRV--R--LEPLMSGGG-QE------R-GR 233 (364)
T ss_pred EEcchhhCCcccCcc-----cC-CCCEEEechhhh-CCCCceEEEEEcCCCCC--C--CCccccCCC-cc------C-Cc
Confidence 999999877655421 11 689999999998 68999999999975321 1 112111110 00 0 00
Q ss_pred cccCCCCC-CchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHc-CCCCc---c--------ceEEEeecCCCccccc
Q 048643 364 QITLSRRF-RSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVAS-DKRVS---P--------SAVMDKLKPKYENCHS 430 (506)
Q Consensus 364 ~~~~sr~~-~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~-~~~~~---p--------~~v~f~~~~~~~~~~~ 430 (506)
. .++... ..+.+..++..+-. +.+++.++..++++++.+.|++ .|+++ | ++++|.+.+..
T Consensus 234 ~-~GT~~~~~~~~l~~al~~~~~-~~~~i~~~~~~l~~~l~~~l~~~~~~~~i~~~~~~~~~~~~i~~~~~~~~~----- 306 (364)
T PLN02651 234 R-SGTENTPLVVGLGAACELAMK-EMDYDEKHMKALRERLLNGLRAKLGGVRVNGPRDPEKRYPGTLNLSFAYVE----- 306 (364)
T ss_pred c-CCCccHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCCCcccCcCCEEEEEeCCCC-----
Confidence 0 122222 23556666666643 4588889999999999999985 57776 2 48888875421
Q ss_pred ccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeE---------------C-----CEEEEEEEecCCCCCHHHHH
Q 048643 431 QQLVTEEEAINEFNRELLESINASGKAYMTHAVC---------------G-----GIYAMRFAVGATLTEERHVM 485 (506)
Q Consensus 431 ~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~---------------~-----g~~~lR~~~~~~~tt~edi~ 485 (506)
.+++.++|.+ +.++.+.. . ..+.+|+|+ ++.||++|||
T Consensus 307 -------------~~~~~~~L~~---i~v~~g~~c~~~~~~~~~~~~~~g~~~~~~~~~vR~S~-~~~~t~~did 364 (364)
T PLN02651 307 -------------GESLLMGLKE---VAVSSGSACTSASLEPSYVLRALGVPEEMAHGSLRLGV-GRFTTEEEVD 364 (364)
T ss_pred -------------HHHHHHHhCC---EEEEchhhcCCCCCCcCHHHHHcCCChHHhCceEEEEc-CCCCCHHHcC
Confidence 2345555532 34432210 0 136899999 6788888885
No 30
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.95 E-value=2.7e-26 Score=237.36 Aligned_cols=341 Identities=13% Similarity=0.110 Sum_probs=222.0
Q ss_pred CCccccCCCCCCHHHHHHHHHHhhcCC---CCc--ccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchH
Q 048643 93 PNYFAYFPSSGSIAGFLGEMLSSGFNV---VGF--NWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCE 167 (506)
Q Consensus 93 p~~~~~~~~~~~~~~~~~~~l~~~~n~---~~~--~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~ 167 (506)
+.||++-..++.++.++ +.+..++.. +.. .+..+.......+++.+.+++++|.+++ ..++++|+|+
T Consensus 4 ~~yld~aa~~~~~~~v~-~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~-------~v~~~~g~t~ 75 (402)
T TIGR02006 4 PIYLDYAATTPVDPRVA-EKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELIGADSR-------EIVFTSGATE 75 (402)
T ss_pred cEEeeCCcCCCCCHHHH-HHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCC-------eEEEeCCHHH
Confidence 35677665555555543 333333311 111 1111222345566778899999998765 6899999999
Q ss_pred HHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHH---hCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHH
Q 048643 168 AILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQI---VGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDV 244 (506)
Q Consensus 168 a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~---~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~ 244 (506)
++..++........+ ++..|+++...|.++..++.. .|+ +++.||+++ ++.+|+++|++++++.
T Consensus 76 a~~~~l~~l~~~~~~-------~g~~Vi~~~~~h~s~~~~~~~~~~~g~---~v~~v~~~~--~~~~d~~~l~~~l~~~- 142 (402)
T TIGR02006 76 SNNLAIKGIAHFYKS-------KGNHIITSKTEHKAVLDTCRYLEREGF---EVTYLPPKS--NGLIDLEELKAAIRDD- 142 (402)
T ss_pred HHHHHHHHHHHhhcC-------CCCEEEECCCccHHHHHHHHHHHhcCC---EEEEEccCC--CCcCCHHHHHHhcCCC-
Confidence 998877665432111 456788899999998876644 477 899999875 4689999999988654
Q ss_pred hcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCc
Q 048643 245 EAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLD 324 (506)
Q Consensus 245 ~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~ 324 (506)
+.+|++++++|++|.+.|+++|+++|+++|+|+|||++++.+....+-. . .++|++++++||++ .|.|
T Consensus 143 -----~~lv~v~~~~n~tG~~~~~~~I~~l~~~~g~~livD~a~a~g~~~~~~~-----~-~~~D~~~~s~~K~~-gp~G 210 (402)
T TIGR02006 143 -----TILVSIMHVNNEIGVIQDIAAIGEICRERKVFFHVDAAQSVGKIPINVN-----E-LKVDLMSISGHKIY-GPKG 210 (402)
T ss_pred -----CEEEEEECCCcCceecccHHHHHHHHHHcCCEEEEEcchhcCCcccCcc-----c-cCCCEEEEehhhhc-CCCc
Confidence 3488899999999999999999999999999999999998776654321 1 17999999999975 5999
Q ss_pred ceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCcccc-CCCCC-CchHHHHHHHHhchhHHHHHHHHHHHHHHHH
Q 048643 325 CCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQIT-LSRRF-RSLKLWLVIRNYGVANLRHFLRSHVNMAKLF 402 (506)
Q Consensus 325 ~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~-~sr~~-~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l 402 (506)
+|+++++++.... + .+ .+..... ...++ ++... ..+.+..+++.+ .++++++.++..++++++
T Consensus 211 ~G~l~~~~~~~~~--~--~~-~~~g~~~---------~~~~~~gt~~~~~~~al~~al~~~-~~~~~~~~~~~~~l~~~l 275 (402)
T TIGR02006 211 IGALYVRRKPRVR--L--EA-LIHGGGH---------ERGMRSGTLPTHQIVGMGEAFRIA-KEEMAQDTAHVLALRDRL 275 (402)
T ss_pred eEEEEEccCCCCC--C--Cc-eecCCCc---------cCCccCCCccHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHH
Confidence 9999998753221 1 11 1111000 00011 11111 123344555544 357888889999999999
Q ss_pred HHHHHcCCCCc---------cc--eEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeE-------
Q 048643 403 ERLVASDKRVS---------PS--AVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVC------- 464 (506)
Q Consensus 403 ~~~l~~~~~~~---------p~--~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~------- 464 (506)
.+.|+++++++ |. +++|...+. +.+...+.+.....|.. +++...
T Consensus 276 ~~~l~~~~~v~~~~~~~~~~p~~~~v~f~~~~~----------------~~~~~~l~~i~v~~G~~-c~~~~~~~~~~l~ 338 (402)
T TIGR02006 276 LNGIKSIEEVYLNGDLEHRVPGNLNVSFNYVEG----------------ESLIMALKDLAVSSGSA-CTSASLEPSYVLR 338 (402)
T ss_pred HHHHhcCCCEEEeCCccccCCCeEEEEEeCcCH----------------HHHHHhcCCEEEechhh-cCCCCCCccHHHH
Confidence 99999887755 12 355542221 12222221111122322 222110
Q ss_pred -------CCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 048643 465 -------GGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAFL 499 (506)
Q Consensus 465 -------~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l~ 499 (506)
....++|+|+ ++.+|++|||+++++|+++.+.+.
T Consensus 339 ~lg~~~~~~~~~vR~S~-~~~~t~edid~l~~~l~~~~~~~~ 379 (402)
T TIGR02006 339 ALGINDELAHSSIRFTI-GRFTTEEEIDYAVKLVKSAIDKLR 379 (402)
T ss_pred HcCCChhhcCceEEEEe-cCCCCHHHHHHHHHHHHHHHHHHH
Confidence 0136899999 567999999999999999987764
No 31
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.95 E-value=1.6e-25 Score=231.74 Aligned_cols=349 Identities=15% Similarity=0.116 Sum_probs=234.6
Q ss_pred CccccCCCCCCHHHHHHHHHHhhcCCC-----CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHH
Q 048643 94 NYFAYFPSSGSIAGFLGEMLSSGFNVV-----GFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEA 168 (506)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~l~~~~n~~-----~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a 168 (506)
.||.+-..++.+..++ +.+..++... ...+..+....+...++++.+++++|.+.. ...++++|+|++
T Consensus 21 ~yld~a~~~~~~~~v~-~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~------~~i~~~~~~t~~ 93 (401)
T PRK10874 21 VYLDSAATALKPQAVI-EATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLNAPDA------KNIVWTRGTTES 93 (401)
T ss_pred EEEeCCcccCCCHHHH-HHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCCCCC------CEEEEECCHHHH
Confidence 5777665555444433 4444444221 122233445566777888999999999422 178889999988
Q ss_pred HHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchH----HHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHH
Q 048643 169 ILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCA----LQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDV 244 (506)
Q Consensus 169 ~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s----~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~ 244 (506)
+..++.......++ ++..|+++...|++ +.+.++..|+ +++.||++. ++.+|+++|++++++++
T Consensus 94 i~~~~~~~~~~~~~-------~gd~vl~~~~~~~s~~~~~~~~~~~~g~---~v~~v~~~~--~~~~d~~~l~~~i~~~t 161 (401)
T PRK10874 94 INLVAQSYARPRLQ-------PGDEIIVSEAEHHANLVPWLMVAQQTGA---KVVKLPLGA--DRLPDVDLLPELITPRT 161 (401)
T ss_pred HHHHHHHhhhccCC-------CcCEEEECCcchHHHHHHHHHHHHHhCC---EEEEEecCC--CCcCCHHHHHHhcCcCc
Confidence 76665543210000 55678889999976 4456678899 999999875 46899999999996643
Q ss_pred hcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCc
Q 048643 245 EAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLD 324 (506)
Q Consensus 245 ~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~ 324 (506)
.+|++++++++||.+.|+++|+++|+++|++++||++|+.+....+ .. .+ ++|.++.++||+ +.|.|
T Consensus 162 ------~lv~i~~~~n~tG~~~~~~~i~~l~~~~g~~~ivD~a~~~g~~~~~-~~----~~-~~d~~~~s~~K~-~gp~G 228 (401)
T PRK10874 162 ------RILALGQMSNVTGGCPDLARAITLAHQAGMVVMVDGAQGAVHFPAD-VQ----AL-DIDFYAFSGHKL-YGPTG 228 (401)
T ss_pred ------EEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEECCcccccccCC-ch----hc-CCCEEEEecccc-cCCCc
Confidence 4888999999999999999999999999999999999976544332 11 12 589999999995 46889
Q ss_pred ceEEEEeCchhHHhhhcCCccccCCccc-c--CCCccCC--CCccccCC-CC-CCchHHHHHHHHhchhHHHHHHHHHHH
Q 048643 325 CCCLWVKDPSALVSSLSTNPEYLKNKAT-E--SKQVVDY--KDWQITLS-RR-FRSLKLWLVIRNYGVANLRHFLRSHVN 397 (506)
Q Consensus 325 ~g~~~~r~~~~l~~~~~~~~~yl~~~~~-~--~~~~~~~--~~~~~~~s-r~-~~al~~~~~l~~~G~~g~~~~i~~~~~ 397 (506)
+|++++++. .+ +.+ .++...... . ....+.+ ..+.++.+ .. ...+.+..++..+...|+.+..++..+
T Consensus 229 ~G~l~~~~~-~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~~~~~~~~~~ 303 (401)
T PRK10874 229 IGVLYGKSE-LL-EAM---SPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDINQAESWSRS 303 (401)
T ss_pred cEEEEEchH-HH-hcC---CCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence 999988753 22 222 112211000 0 0000000 01112222 22 134567777777777788888899999
Q ss_pred HHHHHHHHHHcCCCCc----c--ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeE-------
Q 048643 398 MAKLFERLVASDKRVS----P--SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVC------- 464 (506)
Q Consensus 398 ~a~~l~~~l~~~~~~~----p--~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~------- 464 (506)
+++++.+.|+++|+++ | ++++|.+.+. + ..++.+.|.++|+++.++...
T Consensus 304 l~~~l~~~l~~~~g~~~~~~~~~~i~~~~~~~~----------------~--~~~~~~~L~~~gI~v~~g~~~~~~~~~~ 365 (401)
T PRK10874 304 LATLAEDALAKLPGFRSFRCQDSSLLAFDFAGV----------------H--HSDLVTLLAEYGIALRAGQHCAQPLLAA 365 (401)
T ss_pred HHHHHHHHHhcCCCEEEeCCCCCcEEEEEECCc----------------C--HHHHHHHHHHCCcEEeccccchHHHHHH
Confidence 9999999999998886 3 7888886432 1 245666777778754333211
Q ss_pred -CCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 048643 465 -GGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAF 498 (506)
Q Consensus 465 -~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l 498 (506)
...+++|+|++ +.+|++||++++++|+++++.+
T Consensus 366 ~g~~~~iRiS~~-~~nt~edid~ll~al~~~~~~~ 399 (401)
T PRK10874 366 LGVTGTLRASFA-PYNTQSDVDALVNAVDRALELL 399 (401)
T ss_pred hCCCCEEEEEec-ccCCHHHHHHHHHHHHHHHHHh
Confidence 12468999996 5568889999999999987754
No 32
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.95 E-value=1.3e-25 Score=232.23 Aligned_cols=348 Identities=15% Similarity=0.072 Sum_probs=233.2
Q ss_pred CccccCCCCCCHHHHHHHHHHhhcCC---C--CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHH
Q 048643 94 NYFAYFPSSGSIAGFLGEMLSSGFNV---V--GFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEA 168 (506)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~l~~~~n~---~--~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a 168 (506)
-||.+-..++.+. .+.+.+..+++. + ...+..++...+...++++.+++++|.+.. ...++|+|+|++
T Consensus 18 iyld~a~~~~~p~-~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~------~~i~~t~g~t~~ 90 (398)
T TIGR03392 18 VYLDSAATALKPQ-AVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLNAPDA------ENIVWTRGTTES 90 (398)
T ss_pred EEeeCccccCCCH-HHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCC------CeEEEeCChHHH
Confidence 4676654444443 344444444321 1 122223444556667788999999998532 168899999999
Q ss_pred HHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchH----HHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHH
Q 048643 169 ILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCA----LQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDV 244 (506)
Q Consensus 169 ~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s----~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~ 244 (506)
+..++.+..... . .++..|+++...|++ +...++..|+ +++.+|++. ++.+|+++|++++.+.+
T Consensus 91 l~~~~~~~~~~~-----~--~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~---~v~~v~~~~--~~~~~~~~l~~~i~~~t 158 (398)
T TIGR03392 91 INLVAQSYARPR-----L--QPGDEIIVSEAEHHANLIPWLMVAQQTGA---KVVKLPIGA--DLLPDIRQLPELLTPRT 158 (398)
T ss_pred HHHHHHHhhhcc-----C--CCCCEEEECCcchhHHHHHHHHHHHHcCc---EEEEEecCC--CCCcCHHHHHHHhccCc
Confidence 877665542100 0 145678889999977 3456678899 999999875 46899999999987643
Q ss_pred hcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCc
Q 048643 245 EAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLD 324 (506)
Q Consensus 245 ~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~ 324 (506)
.+|+++++++++|.+.|+++|+++|+++|++++||++|+.+....+ ... + .+|.+++++||++ .|.|
T Consensus 159 ------~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~~-~~~----~-~~d~~~~s~~K~~-gp~G 225 (398)
T TIGR03392 159 ------RILALGQMSNVTGGCPDLARAITLAHQYGAVVVVDGAQGVVHGPPD-VQA----L-DIDFYAFSGHKLY-GPTG 225 (398)
T ss_pred ------eEEEEECccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCCCCC-hhh----c-CCCEEEEeccccc-CCCc
Confidence 4788899999999999999999999999999999999976544322 111 1 5899999999955 5889
Q ss_pred ceEEEEeCchhHHhhhcCCccccCCccc---cCCCccCC--CCccccCC-CCC-CchHHHHHHHHhchhHHHHHHHHHHH
Q 048643 325 CCCLWVKDPSALVSSLSTNPEYLKNKAT---ESKQVVDY--KDWQITLS-RRF-RSLKLWLVIRNYGVANLRHFLRSHVN 397 (506)
Q Consensus 325 ~g~~~~r~~~~l~~~~~~~~~yl~~~~~---~~~~~~~~--~~~~~~~s-r~~-~al~~~~~l~~~G~~g~~~~i~~~~~ 397 (506)
+|++++++. .+ +.+ .++...... .....+.+ ..+.++.+ ... ..+.+..+++.+...|++++.++..+
T Consensus 226 ~G~l~~~~~-~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~~~i~~~~~~ 300 (398)
T TIGR03392 226 IGVLYGKTE-LL-EAM---PPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAAEAWSVS 300 (398)
T ss_pred eEEEEEcHH-HH-hhC---CCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence 999987653 22 222 122211000 00000000 01122222 221 33567777877767788888899999
Q ss_pred HHHHHHHHHHcCCCCc----c--ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeE-------
Q 048643 398 MAKLFERLVASDKRVS----P--SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVC------- 464 (506)
Q Consensus 398 ~a~~l~~~l~~~~~~~----p--~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~------- 464 (506)
+++++.+.|+++++++ | .+++|++.+.. .+.+.+.|.++|+. +..+..
T Consensus 301 l~~~l~~~l~~l~g~~~~~~~~~~i~~~~~~~~~------------------~~~l~~~L~~~gI~-v~~g~~~~~~~~~ 361 (398)
T TIGR03392 301 LADLAEERLAQLPGFRSFRCPGSSLLAFDFAGVH------------------HSDLAALLAESGIA-LRAGQHCAQPLMA 361 (398)
T ss_pred HHHHHHHHHhcCCCeEEeCCCCCcEEEEEeCCcC------------------HHHHHHHHHhCCEE-EecCccchHHHHH
Confidence 9999999999998876 3 78888864321 24566677777764 433221
Q ss_pred --CCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 048643 465 --GGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAF 498 (506)
Q Consensus 465 --~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l 498 (506)
...+++|+|++ +.+|++||++++++|+++++.+
T Consensus 362 ~~g~~~~iRvS~~-~~~t~~ei~~l~~~l~~~~~~~ 396 (398)
T TIGR03392 362 ALGVSGTLRASFA-PYNTQQDVDALVDAVGAALELL 396 (398)
T ss_pred HhCCCCEEEEEee-ccCCHHHHHHHHHHHHHHHHHh
Confidence 11358999995 6788889999999999987653
No 33
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.95 E-value=9.1e-26 Score=229.80 Aligned_cols=335 Identities=12% Similarity=0.053 Sum_probs=228.0
Q ss_pred ccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHH
Q 048643 97 AYFPSSGSIAGFLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAA 176 (506)
Q Consensus 97 ~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~a 176 (506)
.|.+++...+..+.+.+..... . ..++...++.+++.+++++++|.+... ..++++|||+++..++.+.
T Consensus 2 ~~~~~~~~~~~~v~~a~~~~~~----~-~~~~~~~~~~~~~~~~la~~~g~~~~~------~~~~~~~~t~al~~~~~~~ 70 (356)
T cd06451 2 LLIPGPSNVPPRVLKAMNRPML----G-HRSPEFLALMDEILEGLRYVFQTENGL------TFLLSGSGTGAMEAALSNL 70 (356)
T ss_pred cccCCCcCCCHHHHHHhCCCcc----C-CCCHHHHHHHHHHHHHHHHHhcCCCCC------EEEEecCcHHHHHHHHHHh
Confidence 3455666666666666654321 1 245667788888999999999996542 5788999999987777654
Q ss_pred HHHHHHhhcccCCCCeEEEeCCCCchH--HHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEE
Q 048643 177 RDRVLNKIGRENISKLVVYGSDQTHCA--LQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLC 254 (506)
Q Consensus 177 r~~~~~~~~~~~~~~~~v~~s~~~H~s--~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv 254 (506)
.. ++..|+++...|++ +...++..|. +++.+|+++ ++.+|+++|++++++. .|.+|+
T Consensus 71 ~~-----------~g~~vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~--~~~~~~~~l~~~i~~~-----~~~~v~ 129 (356)
T cd06451 71 LE-----------PGDKVLVGVNGVFGDRWADMAERYGA---DVDVVEKPW--GEAVSPEEIAEALEQH-----DIKAVT 129 (356)
T ss_pred CC-----------CCCEEEEecCCchhHHHHHHHHHhCC---CeEEeecCC--CCCCCHHHHHHHHhcc-----CCCEEE
Confidence 22 44567777778886 4577888999 999999875 3689999999999751 234788
Q ss_pred EeccCCCCCcccChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCch
Q 048643 255 ATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPS 334 (506)
Q Consensus 255 ~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~ 334 (506)
++.++|++|.+.|+++|+++|+++|+++++|++|+.+....+-.. .++|.++.++|||++.|.++|+++++++.
T Consensus 130 i~~~~~~~G~~~~~~~i~~~a~~~~~~li~D~~~~~g~~~~~~~~------~~~d~~~~s~~K~l~~p~g~G~l~~~~~~ 203 (356)
T cd06451 130 LTHNETSTGVLNPLEGIGALAKKHDALLIVDAVSSLGGEPFRMDE------WGVDVAYTGSQKALGAPPGLGPIAFSERA 203 (356)
T ss_pred EeccCCCcccccCHHHHHHHHHhcCCEEEEeeehhccCccccccc------cCccEEEecCchhccCCCCcceeEECHHH
Confidence 888999999999999999999999999999999865433222111 16899999999999999999999987642
Q ss_pred hHHhhhcC----CccccCCccccCCCccCCCCcc-cc-CCCCC-CchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHH
Q 048643 335 ALVSSLST----NPEYLKNKATESKQVVDYKDWQ-IT-LSRRF-RSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVA 407 (506)
Q Consensus 335 ~l~~~~~~----~~~yl~~~~~~~~~~~~~~~~~-~~-~sr~~-~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~ 407 (506)
.. .+.. ...|...... ..+.... .. ++-.. ....+..+++.+...+++++.++..++++++.+.|.
T Consensus 204 -~~-~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~ 276 (356)
T cd06451 204 -LE-RIKKKTKPKGFYFDLLLL-----LKYWGEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLAKALREGLE 276 (356)
T ss_pred -HH-HHHhcCCCCceeecHHHH-----HhhhcccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 22 2221 1111110000 0000000 01 11111 124566777777788899999999999999999999
Q ss_pred cCCCCc----c----ceE-EEeecCCCcccccccccchHHHHHHHHHHHHHHHHhc-CcEEEeeeeECCEEEEEEEecCC
Q 048643 408 SDKRVS----P----SAV-MDKLKPKYENCHSQQLVTEEEAINEFNRELLESINAS-GKAYMTHAVCGGIYAMRFAVGAT 477 (506)
Q Consensus 408 ~~~~~~----p----~~v-~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~g~~~lR~~~~~~ 477 (506)
+. +++ | +.+ .++..+. ....++.+.|.++ |+....+.......++|++++ +
T Consensus 277 ~~-g~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~L~~~~gI~~~~g~~~~~~~~iRis~~-~ 337 (356)
T cd06451 277 AL-GLKLLAKPELRSPTVTAVLVPEG-----------------VDGDEVVRRLMKRYNIEIAGGLGPTAGKVFRIGHM-G 337 (356)
T ss_pred Hc-CCeeccCcccCCCceEEEECCCC-----------------CCHHHHHHHHHHhCCEEEecccccccCCEEEEecC-C
Confidence 87 666 2 333 3443221 0134667777777 764332222222358999995 5
Q ss_pred CCCHHHHHHHHHHHHHHH
Q 048643 478 LTEERHVMVAWTMVQEQL 495 (506)
Q Consensus 478 ~tt~edi~~li~~l~~~~ 495 (506)
.++++||++++++|+++.
T Consensus 338 ~~~~e~v~~~~~~l~~~~ 355 (356)
T cd06451 338 EATREDVLGVLSALEEAL 355 (356)
T ss_pred CCCHHHHHHHHHHHHHHh
Confidence 688889999999998864
No 34
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.95 E-value=2.9e-25 Score=229.60 Aligned_cols=366 Identities=14% Similarity=0.079 Sum_probs=228.6
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCccccCCCCCCHHHHHHHHHHhh-cCCCCccccc--ChhhHHHHHHHHHHHHHHcCCCC
Q 048643 73 ETILQDVQEHIVPGVTHWQSPNYFAYFPSSGSIAGFLGEMLSSG-FNVVGFNWIS--SPAATELENIVMDWLGQMLKLPK 149 (506)
Q Consensus 73 ~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~-~n~~~~~~~~--~p~~~~lE~~~~~~la~l~g~~~ 149 (506)
.+||+++...-.++...-.+-..++-...+-.+|..+.+..... .......|.. ..+..++..++.+++++++|.+.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~~~ 81 (398)
T cd00613 2 TEVLRHLKRLASKNKALDQSMSFLGSGTYKHNPPAVIKRNILENEFYTAYTPYQPEISQGRLQALFELQTMLCELTGMDV 81 (398)
T ss_pred HHHHHHHHHHHhcCcCcccCcccccccccCCcCcHHHHHHhccccCcccCCCCChhhhhhHHHHHHHHHHHHHHHHCCCc
Confidence 37888887632223222112133443333344555555544443 1111111222 56677899999999999999875
Q ss_pred ccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhC----CCCCCeEEEecCC
Q 048643 150 SFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVG----IDLKNFRAIKTTK 225 (506)
Q Consensus 150 ~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G----~g~~~v~~v~~~~ 225 (506)
+ ..+++.+|+.+...++..++.. . .++..|+++...|.+...++..+| . +++.+|+++
T Consensus 82 ~-------~v~~~~~g~~~~~~~~~~~~~~--~------~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~---~~~~v~~~~ 143 (398)
T cd00613 82 A-------NASLQDEATAAAEAAGLAAIRA--Y------HKRNKVLVPDSAHPTNPAVARTRGEPLGI---EVVEVPSDE 143 (398)
T ss_pred c-------ceeccCchHHHHHHHHHHHHhc--c------cCCCEEEEcCccCcchHHHHHHhcccCCc---EEEEeccCC
Confidence 4 3456665554444444444322 0 036678899999999999988887 6 889999864
Q ss_pred CCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccCh-hHHHHHHHHhCCEEEeecccccccccCccchhhhcC
Q 048643 226 SSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPL-KPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDG 304 (506)
Q Consensus 226 ~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl-~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~g 304 (506)
++.+|+++|++++.+++ .+|+++.++ ++|.+.|+ ++|+++|++||+|+++|++++.+....+...
T Consensus 144 --~~~~d~~~l~~~i~~~t------~~viv~~~~-~~G~~~~~l~~i~~la~~~g~~livD~~~~~~~~~~~~~~----- 209 (398)
T cd00613 144 --GGTVDLEALKEEVSEEV------AALMVQYPN-TLGVFEDLIKEIADIAHSAGALVYVDGDNLNLTGLKPPGE----- 209 (398)
T ss_pred --CCCcCHHHHHHhcCCCe------EEEEEECCC-CCceecchHHHHHHHHHhcCCEEEEEeccccccCCCChHH-----
Confidence 45899999999886543 367777775 68999885 9999999999999999999865443332111
Q ss_pred CCCCCeeEEcCccccCCCC-----cceEEEEeCchhHHhhhcCCccccCCccccC-CCccCCC-----------CccccC
Q 048643 305 VEGADSFSLNAHKWFFTTL-----DCCCLWVKDPSALVSSLSTNPEYLKNKATES-KQVVDYK-----------DWQITL 367 (506)
Q Consensus 305 i~~aDsi~~~~hK~l~~p~-----~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~-~~~~~~~-----------~~~~~~ 367 (506)
.++|+++.++|||+ .|. ++|++++++. .. ..+.....+........ ....++. ...+..
T Consensus 210 -~~~d~~~~s~~K~~-~p~g~Ggp~~g~l~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~ 285 (398)
T cd00613 210 -YGADIVVGNLQKTG-VPHGGGGPGAGFFAVKKE-LV-RFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICT 285 (398)
T ss_pred -cCCCEEEeeccccC-CCCCCCCCceeEEEEhhh-hH-hhCCCCeeccccccCCCcceEEecccchhhccccccccccee
Confidence 26999999999999 774 4567777643 22 22211100110000000 0000000 000001
Q ss_pred CCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc----c--ceEEEeecCCCcccccccccchHHHHH
Q 048643 368 SRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS----P--SAVMDKLKPKYENCHSQQLVTEEEAIN 441 (506)
Q Consensus 368 sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~----p--~~v~f~~~~~~~~~~~~~~~~~~~~~~ 441 (506)
+....+..+|.++..++.++++++.++..++++++.++|++++++. + .+++|++.... .
T Consensus 286 ~~~~~~~~a~~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~v~~~~~~~~---------------~ 350 (398)
T cd00613 286 GQALLALMAAMYIVYLGPEGLKEIAERAHLNANYLAKRLKEVGGVLPFNGPFFHEFVLRLPPLY---------------G 350 (398)
T ss_pred cHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCeeEEEEEEcCCcc---------------h
Confidence 1112335677778888999999999999999999999999886553 2 45677664310 1
Q ss_pred HHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHH
Q 048643 442 EFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMV 491 (506)
Q Consensus 442 ~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l 491 (506)
....++.++|.++|+. +....+.+...+|+++ +..+|++|||+++++|
T Consensus 351 ~~~~~~~~~L~~~gi~-~~~~~~~~~~~lRis~-~~~~t~edid~~~~~L 398 (398)
T cd00613 351 IRAEDLAKALIDGGFH-APTMYLPVDGTLMIEP-TETETKEELDALLEAL 398 (398)
T ss_pred HHHHHHHHhhhhcCcc-ccccccCCCCeEEEEc-CCCCCHHHHHHHHHhC
Confidence 1235677777777864 3222233457899998 6788899999999864
No 35
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.94 E-value=2.7e-24 Score=237.39 Aligned_cols=384 Identities=14% Similarity=0.014 Sum_probs=251.4
Q ss_pred CCCC--CCCCHHHHHHHHHHHhcCCCCCCCCCCccccCCCCCCHHHHHHHHHHhhcCC-----CCcccccChhhHHHHHH
Q 048643 64 CAPY--NPESMETILQDVQEHIVPGVTHWQSPNYFAYFPSSGSIAGFLGEMLSSGFNV-----VGFNWISSPAATELENI 136 (506)
Q Consensus 64 ~~p~--~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~-----~~~~~~~~p~~~~lE~~ 136 (506)
..|+ +-.|+.++++.+.++-..+..-.++..-+|- +.-.+-+-+ ++....+.. +...-++..+.-++-.+
T Consensus 496 ~~p~f~~~~se~~~~r~~~~l~~~~~~~~~~~~plgs--ctmk~n~~~-~~~~~~~~~~~~~hp~~p~~~~~g~~~~~~~ 572 (993)
T PLN02414 496 THPIFNQYHSEHELLRYLHRLQNKDLSLVHSMIPLGS--CTMKLNATT-EMMPVTWPEFANIHPFAPVDQAQGYQEMFED 572 (993)
T ss_pred cCcccccccCHHHHHHHHHHHhhcccccccCCccCcc--cccccCchh-hhhhhcCcchhhcCCCCCHHHHHHHHHHHHH
Confidence 4455 2368899999998865555443333222330 111111111 111111210 11122344466778889
Q ss_pred HHHHHHHHcCCCCccccCCCCcEEEcCCch----HHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhC
Q 048643 137 VMDWLGQMLKLPKSFLFSGNGGGVIQGTTC----EAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVG 212 (506)
Q Consensus 137 ~~~~la~l~g~~~~~~~~~~~~g~~t~ggt----~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G 212 (506)
+.+|+++++|++ ..+|+++++ ++++.++....+ ..|.. .+.+|++|..+|.+....+.+.|
T Consensus 573 ~r~~la~i~g~~---------~v~f~pnaga~ge~a~~~vi~~~~~----~~Gd~--~r~~vli~~~aH~sn~a~a~~~G 637 (993)
T PLN02414 573 LGDLLCEITGFD---------SFSLQPNAGAAGEYAGLMVIRAYHL----SRGDH--HRNVCIIPVSAHGTNPASAAMCG 637 (993)
T ss_pred HHHHHHHHhCCC---------eEEEcCCCcHHHHHHHHHHHHHHHh----ccCCC--CCCEEEeCCCcCccCHHHHHHCC
Confidence 999999999993 578888887 666666655432 11211 45689999999999999999999
Q ss_pred CCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeeccccccc
Q 048643 213 IDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSA 292 (506)
Q Consensus 213 ~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~ 292 (506)
+ +++.||++. +|.+|+++|+++|++.++ ...+|++|+++|.+|.++|+++|+++||++|+.++||||+..+.
T Consensus 638 ~---~vv~v~~d~--~G~vDle~L~~~i~~~~~---~ta~V~vt~pSn~gg~e~~I~eI~~iah~~Galv~vDgAq~~a~ 709 (993)
T PLN02414 638 M---KIVVVGTDA--KGNINIEELRKAAEAHKD---NLAALMVTYPSTHGVYEEGIDEICDIIHDNGGQVYMDGANMNAQ 709 (993)
T ss_pred C---EEEEeccCC--CCCcCHHHHHHHHhccCC---CeEEEEEECCCccccccchHHHHHHHHHHcCCEEEEEecCHHhc
Confidence 9 999999975 569999999999985321 24589999999999999999999999999999999999996655
Q ss_pred ccCccchhhhcCCCCCCeeEEcCccccCCCCc-----ceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCccccC
Q 048643 293 CICPEFQHFIDGVEGADSFSLNAHKWFFTTLD-----CCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITL 367 (506)
Q Consensus 293 ~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~-----~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~ 367 (506)
........ -++|.++++.||||+.|.| +|+++++.. +... -|........ +.......+..|
T Consensus 710 ~~l~~p~~-----~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~--L~p~---lPg~~v~~~~---~~~~r~~~s~iG 776 (993)
T PLN02414 710 VGLTSPGF-----IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH--LAPF---LPSHPVVPTG---GIPRPEKTQPLG 776 (993)
T ss_pred cCcCCccc-----cCCCEEEecCCccCCcCcccCCCCeeeEEEchh--hccc---CCCCccccCC---CcccccCCCCcC
Confidence 32221111 1899999999999998876 999988862 2211 1222111100 001000111123
Q ss_pred CCCC-------CchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c-----ceEEEeecCCCccccccc
Q 048643 368 SRRF-------RSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS---P-----SAVMDKLKPKYENCHSQQ 432 (506)
Q Consensus 368 sr~~-------~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p-----~~v~f~~~~~~~~~~~~~ 432 (506)
+++. .++..|..++.+|.+|+++..++...+|+|++++|++..++. | ..+.+...+-+ +.
T Consensus 777 t~~~a~~g~al~l~~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~~~~~~~~~~~~~~~hEfv~~~~~l~-----~~ 851 (993)
T PLN02414 777 TISAAPWGSALILPISYTYIAMMGSEGLTDASKIAILNANYMAKRLEGHYPVLFRGKNGTCAHEFIIDLRPFK-----NT 851 (993)
T ss_pred CccchhhhhHHHHHHHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCeeeeEEEeccccc-----cc
Confidence 4332 225779999999999999999999999999999998743332 2 12333332110 00
Q ss_pred ccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHc
Q 048643 433 LVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAFLT 500 (506)
Q Consensus 433 ~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l~~ 500 (506)
.. .....+.++|.+.|+.... ..+.....+|++.+ ...+++|||+++++|..+.+++..
T Consensus 852 ~g-------~~~~di~krL~d~Gihapt-~~~pv~~~lmiepT-E~~skeelDrf~~al~~i~~e~~~ 910 (993)
T PLN02414 852 AG-------IEPEDVAKRLMDYGFHAPT-MSWPVPGTLMIEPT-ESESKAELDRFCDALISIREEIAD 910 (993)
T ss_pred cC-------CCHHHHHHHHHHcCcEEee-eccccCCEEEEEee-eeCCHHHHHHHHHHHHHHHHHHHH
Confidence 00 0125577777777774322 22344678999996 566777999999999999988875
No 36
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.94 E-value=2.1e-24 Score=233.77 Aligned_cols=388 Identities=13% Similarity=0.035 Sum_probs=254.7
Q ss_pred CCCCC--CCCCHHHHHHHHHHHhcCCCCCCCCCCcccc-----CCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHH
Q 048643 63 ECAPY--NPESMETILQDVQEHIVPGVTHWQSPNYFAY-----FPSSGSIAGFLGEMLSSGFNVVGFNWISSPAATELEN 135 (506)
Q Consensus 63 ~~~p~--~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~-----~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~ 135 (506)
...|. .+.|+.++++.+.++-..+....++..|+|- -+..-..|+...+|.+. .+.. ..+.+.+.-++-.
T Consensus 470 ~~~p~f~~~~SE~el~r~~~~La~kn~~~~~~~~~LGsCTmK~n~~~~~~p~s~~eF~t~--hPyq-p~e~sQG~lq~i~ 546 (954)
T PRK12566 470 LQHPVFNAHHSETEMLRYLKQLENKDLALNQSMIPLGSCTMKLNATSEMIPITWPEFAQL--HPFA-PREQAEGYRAMID 546 (954)
T ss_pred ccCcccccCCCHHHHHHHHHHHHhcCcCcccCcccCcccccCcCcHHhhhcccchhhhcC--CCCC-chhhhcCHHHHHH
Confidence 34453 4679999999999987777665556677773 22222334456667665 2222 2233444444444
Q ss_pred HHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCCC
Q 048643 136 IVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGIDL 215 (506)
Q Consensus 136 ~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~ 215 (506)
+..+|+++++|++.. .+.-++|+++++.++++.|.....+ |.. .+.+|+++..+|.+....+...|+
T Consensus 547 elq~~l~eLtGmd~~--------Sl~p~sGA~gE~A~Lmair~yh~~~-Ge~--~r~~vLIp~saHgtNpasa~~~Gi-- 613 (954)
T PRK12566 547 ELEAWLCAITGFDAI--------CMQPNSGAQGEYAGLLAIRRYHRSR-GQS--QRDICLIPSSAHGTNPASAQMAGM-- 613 (954)
T ss_pred HHHHHHHHHHCCCeE--------eecCCchHHHHHHHHHHHHHHHHhc-CCC--CCCEEEecccccccCHHHHHHCCC--
Confidence 455999999999853 2334478889988888877543222 222 466788999999777777888899
Q ss_pred CCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecccccccccC
Q 048643 216 KNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIC 295 (506)
Q Consensus 216 ~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~~~ 295 (506)
+++.||+|+ +|.+|+++|+++|++.. ....+|+++.+++..+..+|+++|+++||++|++++||||+..+....
T Consensus 614 -eVv~Vp~D~--~G~iDle~L~a~I~~~~---~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Galv~vDgA~~~a~~~l 687 (954)
T PRK12566 614 -RVVIVECDP--DGNVDLDDLKAKAAAAG---DRLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYMDGANLNAQVGL 687 (954)
T ss_pred -EEEEeccCC--CCCcCHHHHHHHhhccC---CCEEEEEEEecCcCceecchHHHHHHHHHHcCCEEEEEeeChhhccCC
Confidence 999999985 56999999999997321 234578888888887777889999999999999999999996544433
Q ss_pred ccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeC---chhHHhhhcCCccccCCccc-c-CCCccCCCCccccCCCC
Q 048643 296 PEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKD---PSALVSSLSTNPEYLKNKAT-E-SKQVVDYKDWQITLSRR 370 (506)
Q Consensus 296 ~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~---~~~l~~~~~~~~~yl~~~~~-~-~~~~~~~~~~~~~~sr~ 370 (506)
+..... +||.+++++||||+.|.+.|..++.. +..+. +|+...+. + .+.....+.....+.-.
T Consensus 688 ~~Pg~~-----GADi~~~s~HKtf~~P~G~GGP~vG~iav~~~L~-------pfLp~~P~~d~~G~~~r~ga~S~~~~gs 755 (954)
T PRK12566 688 ARPADI-----GADVSHMNLHKTFCIPHGGGGPGMGPIGVRAHLA-------PFVANHPVVPVEGPDPNNGAVSAAPWGS 755 (954)
T ss_pred CChhhc-----CCCEEEecCCcccCcCccCCCCccchhhhhhhhh-------hhccCCCCcCCCCCCCCCCceeecccch
Confidence 322222 89999999999999999988887765 22221 23332110 0 00000001111111111
Q ss_pred -CCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc--c------ceEEEeecCCCcccccccccchHHHHH
Q 048643 371 -FRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS--P------SAVMDKLKPKYENCHSQQLVTEEEAIN 441 (506)
Q Consensus 371 -~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~--p------~~v~f~~~~~~~~~~~~~~~~~~~~~~ 441 (506)
.-++..|..++.+|.+ +.+.......+|+|++++|.+..+.. | ..+.++..+-. +...
T Consensus 756 a~~l~~A~~Yi~~lG~e-Lk~aa~~ailnAnYla~rL~~~~~v~~~~~~~~~~hEfii~~~~l~-----~~~g------- 822 (954)
T PRK12566 756 ASILPISWMYIAMMGPQ-LADASEVAILSANYLANQLGGAFPVLYRGRNERVAHECILDLRPLK-----AQTG------- 822 (954)
T ss_pred HHHHHHHHHHHHHHCHH-HHHHHHHHHHHHHHHHHHhHhhCCCCcCCCCCCeeeEEEEEccccc-----cccC-------
Confidence 1146889999999999 88888888999999999998742222 1 12222222110 0000
Q ss_pred HHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 048643 442 EFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAFL 499 (506)
Q Consensus 442 ~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l~ 499 (506)
.....+.++|.+.|+.... ..+.....+|++.+ ...+++|||+++++|+.+.+++.
T Consensus 823 ~~~~dvakRL~d~Gihapt-~~fPv~~~LmIepT-E~eskeEIDrf~eAL~~I~~e~~ 878 (954)
T PRK12566 823 ISEEDVAKRLMDYGFHAPT-MSFPVPGTLMVEPT-ESESKAELDRFVEAMLSIRAEIG 878 (954)
T ss_pred CCHHHHHHHHHHCCcEEeE-EeeccCCEEEEEee-eeCCHHHHHHHHHHHHHHHHHHH
Confidence 0124567777777764222 23445678999996 56677799999999999988864
No 37
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.94 E-value=9.3e-25 Score=223.64 Aligned_cols=311 Identities=15% Similarity=0.141 Sum_probs=219.0
Q ss_pred ccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCch
Q 048643 123 NWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHC 202 (506)
Q Consensus 123 ~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~ 202 (506)
.+..+....++-+++.+.+++++|.+.+. ..+|++++|.++..++...+... + ++..|+++...|+
T Consensus 34 ~~~~~~~~~~~~~~~r~~la~~lg~~~~~------~v~~~~~~t~a~~~~~~~l~~~~-~-------~g~~vl~~~~~~~ 99 (371)
T PF00266_consen 34 VSHRSREFAEILEEAREALAKLLGAPPDE------EVVFTSNGTEALNAVASSLLNPL-K-------PGDEVLVTSNEHP 99 (371)
T ss_dssp SSTTSHHHHHHHHHHHHHHHHHHTSSTTE------EEEEESSHHHHHHHHHHHHHHHG-T-------TTCEEEEEESSHH
T ss_pred ccchhhhhhHHHHHHHHHHHHhcCCcccc------ccccccccchhhhhhhhcccccc-c-------ccccccccccccc
Confidence 34445566777788899999999999832 68899999988877666664321 1 5567888889998
Q ss_pred HHH----HHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHh
Q 048643 203 ALQ----KAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQF 278 (506)
Q Consensus 203 s~~----ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~ 278 (506)
+.. +.++..|+ +++.+|.+. ++.+|+++++++|.+++ .+|++++.+|.+|.+.|+++|+++||++
T Consensus 100 s~~~~~~~~~~~~g~---~v~~i~~~~--~~~~~~~~~~~~l~~~~------~lv~~~~~~~~tG~~~pi~~I~~~~~~~ 168 (371)
T PF00266_consen 100 SNRYPWEEIAKRKGA---EVRVIPADP--GGSLDLEDLEEALNPDT------RLVSISHVENSTGVRNPIEEIAKLAHEY 168 (371)
T ss_dssp HHHHHHHHHHHHTTE---EEEEEEEGT--TSSCSHHHHHHHHHTTE------SEEEEESBETTTTBBSSHHHHHHHHHHT
T ss_pred ccccccccccccchh---hhccccccc--cchhhhhhhhhhhcccc------ceEEeecccccccEEeeeceehhhhhcc
Confidence 876 44456788 999999875 45999999999997654 4899999999999999999999999999
Q ss_pred CCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCc--cccCCccccCCC
Q 048643 279 GIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNP--EYLKNKATESKQ 356 (506)
Q Consensus 279 g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~--~yl~~~~~~~~~ 356 (506)
|++++||++++.+.+..+- ... ++|.+++++|| ++.|.|+|+++++++.. .+.-.... .|...... ...
T Consensus 169 ~~~~~vD~~~~~g~~~id~-~~~-----~~D~~~~s~~K-l~gp~G~g~l~v~~~~~-~~~~p~~~~~~~~~~~~~-~~~ 239 (371)
T PF00266_consen 169 GALLVVDAAQSAGCVPIDL-DEL-----GADFLVFSSHK-LGGPPGLGFLYVRPEAI-ERLRPAKPGGGYLDFPSL-QEY 239 (371)
T ss_dssp TSEEEEE-TTTTTTSS--T-TTT-----TESEEEEESTS-TTSSSTEEEEEEEHHHH-HHHHTSSSSSSTTTHHHH-HHH
T ss_pred CCceeEechhccccccccc-ccc-----ccceeeecccc-cCCCCchhhheehhhhh-hccccccccccccccccc-hhc
Confidence 9999999999888776652 211 79999999999 88899999999998543 22211111 11110000 000
Q ss_pred ccCCCCccccC-CCCC-CchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c-------ceEEEeecCC
Q 048643 357 VVDYKDWQITL-SRRF-RSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS---P-------SAVMDKLKPK 424 (506)
Q Consensus 357 ~~~~~~~~~~~-sr~~-~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p-------~~v~f~~~~~ 424 (506)
......+.++. +... ..+.+..+++.+...|++++.++..++++++.+.|+++++++ | ++++|.+.+.
T Consensus 240 ~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 319 (371)
T PF00266_consen 240 GLADDARRFEGGTPNVPAIYALNEALKLLEEIGIERIRERIRELAEYLREALEELPGIEVLGPDDEPRRPSIVSFNLPGS 319 (371)
T ss_dssp CHHSTTTGSSSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTEEESSSSCGGBGTTEEEEEETTS
T ss_pred ccccccccccccceeeehhhhHHHHHhhhhccccccchhhhhhHHHHHHhhhhcCCceeEeeecccccccceEEEeecCC
Confidence 00001111222 2221 124566777888778999999999999999999999988755 2 8999998543
Q ss_pred CcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeEC---------CEEEEEEEecCCCCCHHHHHHH
Q 048643 425 YENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCG---------GIYAMRFAVGATLTEERHVMVA 487 (506)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~---------g~~~lR~~~~~~~tt~edi~~l 487 (506)
. .+.+.+.|.++|+. ++.+... -..++|+++ ++.+|++|||+|
T Consensus 320 ~------------------~~~~~~~L~~~~I~-~~~G~~~~~~~~~~~~~~~~iRvS~-~~~nt~~dv~~l 371 (371)
T PF00266_consen 320 D------------------ADDVVKYLEERGIA-VSTGSACAGPSLDILGMGGVIRVSL-HYYNTEEDVDRL 371 (371)
T ss_dssp S------------------HHHHHHHHHHHTEE-EEESTTTCHHHHHHHHTTTEEEEE--GTTSSHHHHHHH
T ss_pred C------------------HHHHHHHHhhcCEE-EeccCcccHHHHHHhCCCCEEEEec-cCCCCHHHHhhC
Confidence 1 25667777777664 4432211 126899997 678889999986
No 38
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.94 E-value=3.6e-24 Score=220.15 Aligned_cols=304 Identities=13% Similarity=0.147 Sum_probs=206.7
Q ss_pred hhHHHHHHHHHHHHHHcCC-CCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHH
Q 048643 129 AATELENIVMDWLGQMLKL-PKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKA 207 (506)
Q Consensus 129 ~~~~lE~~~~~~la~l~g~-~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka 207 (506)
....+++... .+.+.+|. +.+ ..++|+|+|+++..++.+.....+.+ .++..|+++...|+++...
T Consensus 40 ~~~~l~~a~~-~~~~~~~~~~~~-------~i~~t~g~teal~~~~~~~~~~~~~~-----~~~~~vi~~~~e~ps~~~~ 106 (382)
T TIGR03403 40 THPAIAEALD-KLYKGINARDLD-------DIIITSCATESNNWVLKGVYFDEILK-----GGKNHIITTEVEHPAVRAT 106 (382)
T ss_pred HHHHHHHHHH-HHHHHcCcCCCC-------eEEEeCCHHHHHHHHHHHHHHhhccc-----CCCCEEEEcCCccHHHHHH
Confidence 3345555444 44455665 333 78999999999887776542111100 0345688888999887766
Q ss_pred H---HHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEe
Q 048643 208 A---QIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHV 284 (506)
Q Consensus 208 ~---~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhV 284 (506)
. +..|+ +++.||+++ ++.+|+++|++++.+.+ .+|+++.++|+||.+.|+++|+++|+++|+++||
T Consensus 107 ~~~~~~~G~---~v~~v~~~~--~g~~d~~~l~~~i~~~t------~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~~iv 175 (382)
T TIGR03403 107 CAFLESLGV---EVTYLPINE--QGTITAEQVREAITEKT------ALVSVMWANNETGMIFPIKEIGEICKERGVLFHT 175 (382)
T ss_pred HHHHHHCCC---EEEEEecCC--CCCCCHHHHHHhcccCC------eEEEEEcccCCCccccCHHHHHHHHHHcCCEEEE
Confidence 4 44677 999999875 46999999999987643 3788899999999999999999999999999999
Q ss_pred ecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCcc
Q 048643 285 DAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQ 364 (506)
Q Consensus 285 DaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~ 364 (506)
|++++.+....+... .++|.+++++|||+ .|.|+|++++|+...+ .+ .+...... ....
T Consensus 176 D~a~~~g~~~~~~~~------~~~D~~~~s~~K~~-gp~G~g~l~vr~~~~~------~p-~~~g~~~~----~~~~--- 234 (382)
T TIGR03403 176 DAVQAIGKIPVDVQK------AGVDFLSFSAHKFH-GPKGVGGLYIRKGVEL------TP-LFHGGEHM----GGRR--- 234 (382)
T ss_pred echhhcCCCccCccc------cCCCEEEEcchhhC-CCCceEEEEECCCCCC------CC-cccCCCCC----CCcc---
Confidence 999986655433211 27999999999984 5999999999875321 11 22110000 0000
Q ss_pred ccCCCCCCc-hHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c------ceEEEeecCCCccccccccc
Q 048643 365 ITLSRRFRS-LKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS---P------SAVMDKLKPKYENCHSQQLV 434 (506)
Q Consensus 365 ~~~sr~~~a-l~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p------~~v~f~~~~~~~~~~~~~~~ 434 (506)
.++-...+ +.+..+++.. .+.++...++..++++++.+.|+++++++ | +++.|.+....
T Consensus 235 -~gt~~~~~~~al~~al~~~-~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 303 (382)
T TIGR03403 235 -SGTLNVPYIVAMGEAMRLA-NEYLDFEKSHVRRLRDRLEDALLELPDVFVVGDREHRVPNTILISIKGVE--------- 303 (382)
T ss_pred -cCCcChHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCcCCEEEEEeCCCC---------
Confidence 11112222 2444555543 34577788899999999999999988876 2 47777765321
Q ss_pred chHHHHHHHHHHHHHHHHhcCcEEEeeee---------------EC-----CEEEEEEEecCCCCCHHHHHHHHHHHHHH
Q 048643 435 TEEEAINEFNRELLESINASGKAYMTHAV---------------CG-----GIYAMRFAVGATLTEERHVMVAWTMVQEQ 494 (506)
Q Consensus 435 ~~~~~~~~~~~~l~~~l~~~g~~~~~~~~---------------~~-----g~~~lR~~~~~~~tt~edi~~li~~l~~~ 494 (506)
.+.+...|.++|+. +..+. .. ....+|++++ +.+|++|||+++++|+++
T Consensus 304 ---------~~~~~~~L~~~gI~-v~~g~~c~~~~~~~~~v~~~~g~~~~~~~~~iR~s~~-~~~t~~did~~~~~l~~~ 372 (382)
T TIGR03403 304 ---------GEAMLWDLNKAGIA-ASTGSACASEDLEANPVMVAIGADKELAHTAIRLSLS-RFTTEEEIDYTIEVFKKA 372 (382)
T ss_pred ---------HHHHHHhhccCCEE-EEchhccCCCCCCcCHHHHHcCCChHHhCeeEEEECC-CCCCHHHHHHHHHHHHHH
Confidence 23455556666664 43211 00 1367999995 788999999999999998
Q ss_pred HHHHH
Q 048643 495 LEAFL 499 (506)
Q Consensus 495 ~~~l~ 499 (506)
.+++.
T Consensus 373 ~~~~~ 377 (382)
T TIGR03403 373 VQRLR 377 (382)
T ss_pred HHHHH
Confidence 87764
No 39
>PRK02948 cysteine desulfurase; Provisional
Probab=99.94 E-value=2e-24 Score=222.02 Aligned_cols=310 Identities=12% Similarity=0.117 Sum_probs=213.8
Q ss_pred cccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCc
Q 048643 122 FNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTH 201 (506)
Q Consensus 122 ~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H 201 (506)
..+..+.....+..++.+.+++++|.+++ ..++++|+|+++..++.+......+ ++..|+++...|
T Consensus 33 ~~~~~~~~~~~~~~~~r~~la~~~g~~~~-------~i~~~~g~t~a~~~~~~~~~~~~~~-------~g~~vv~~~~~h 98 (381)
T PRK02948 33 SLHDIGGTASSLLQVCRKTFAEMIGGEEQ-------GIYFTSGGTESNYLAIQSLLNALPQ-------NKKHIITTPMEH 98 (381)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHhCCCCC-------eEEEeCcHHHHHHHHHHHHHHhccC-------CCCEEEECCccc
Confidence 33444556667788899999999998765 6889999999998887776542100 456788899999
Q ss_pred hHHHHHH---HHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHh
Q 048643 202 CALQKAA---QIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQF 278 (506)
Q Consensus 202 ~s~~ka~---~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~ 278 (506)
+|+.... +..|+ +++.+|+++ ++.+|+++|++++++. +.+|+++.++|+||.+.|+++|+++|+++
T Consensus 99 ~s~~~~~~~~~~~g~---~v~~v~~~~--~~~~d~~~l~~~l~~~------~~lv~~~~~~n~tG~~~~~~~I~~l~~~~ 167 (381)
T PRK02948 99 ASIHSYFQSLESQGY---TVTEIPVDK--SGLIRLVDLERAITPD------TVLASIQHANSEIGTIQPIAEIGALLKKY 167 (381)
T ss_pred HHHHHHHHHHHhCCC---EEEEEeeCC--CCCCCHHHHHHhcCCC------CEEEEEECCcCCcEeehhHHHHHHHHHHc
Confidence 9877654 44577 999999874 4689999999988643 34899999999999999999999999999
Q ss_pred CCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCcc
Q 048643 279 GIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVV 358 (506)
Q Consensus 279 g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~ 358 (506)
|+|+|||++++.+....+- . . .++|.++.++||+++ |.|+|++++++...+.. ....... ..
T Consensus 168 ~~~vivD~~~~~g~~~~~~-~----~-~~~d~~~~s~~K~~g-p~G~G~l~~~~~~~~~~-------~~~~~~~----~~ 229 (381)
T PRK02948 168 NVLFHSDCVQTFGKLPIDV-F----E-MGIDSLSVSAHKIYG-PKGVGAVYINPQVRWKP-------VFPGTTH----EK 229 (381)
T ss_pred CCEEEEEChhhccccccCc-c----c-CCCCEEEecHHhcCC-CCcEEEEEEcCCCCCCC-------cccCCCC----CC
Confidence 9999999988655433321 1 1 169999999999765 88999999876431110 0000000 00
Q ss_pred CCCCccccCCCCC-CchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc--c---------ceEEEeecCCCc
Q 048643 359 DYKDWQITLSRRF-RSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS--P---------SAVMDKLKPKYE 426 (506)
Q Consensus 359 ~~~~~~~~~sr~~-~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~--p---------~~v~f~~~~~~~ 426 (506)
.+. .++-.. ....+..+++.. .++.++..++..++++++.+.|+++ +++ + .++.|.....
T Consensus 230 ~~~----~~t~~~~~~~a~~~al~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-~~~v~~~~~~~~~~~~i~~~~~~~~-- 301 (381)
T PRK02948 230 GFR----PGTVNVPGIAAFLTAAENI-LKNMQEESLRFKELRSYFLEQIQTL-PLPIEVEGHSTSCLPHIIGVTIKGI-- 301 (381)
T ss_pred CcC----CCCccHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcC-CCCEEEeCCCccCcCCEEEEEeCCC--
Confidence 000 011111 123444445443 2467888899999999999999987 443 1 3555654331
Q ss_pred ccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeee-----E---------------CCEEEEEEEecCCCCCHHHHHH
Q 048643 427 NCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAV-----C---------------GGIYAMRFAVGATLTEERHVMV 486 (506)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-----~---------------~g~~~lR~~~~~~~tt~edi~~ 486 (506)
+ ..++...|.++|+. +.... + ....++|++++ +.+|++||++
T Consensus 302 --------------~--~~~~~~~l~~~gI~-v~~g~~c~~~~~~p~~~~~~~~~~~~~~~~~lRis~~-~~~t~~di~~ 363 (381)
T PRK02948 302 --------------E--GQYTMLECNRRGIA-ISTGSACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFG-QQTTKDQIDT 363 (381)
T ss_pred --------------C--HHHHHHhcccCCEE-EEchHhcCCCCCCCCHHHHHcCCChHHhCceEEEEcC-CCCCHHHHHH
Confidence 0 23455566666764 43221 0 12468999985 7788889999
Q ss_pred HHHHHHHHHHHHHc
Q 048643 487 AWTMVQEQLEAFLT 500 (506)
Q Consensus 487 li~~l~~~~~~l~~ 500 (506)
++++|+++.+.+-+
T Consensus 364 l~~~l~~~~~~~~~ 377 (381)
T PRK02948 364 TIHALETIGNQFYR 377 (381)
T ss_pred HHHHHHHHHHHHhc
Confidence 99999998876644
No 40
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.94 E-value=3.3e-24 Score=223.33 Aligned_cols=349 Identities=16% Similarity=0.108 Sum_probs=230.0
Q ss_pred CCccccCCCCCCHHHHHHHHHHhhcCC---CC--cccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchH
Q 048643 93 PNYFAYFPSSGSIAGFLGEMLSSGFNV---VG--FNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCE 167 (506)
Q Consensus 93 p~~~~~~~~~~~~~~~~~~~l~~~~n~---~~--~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~ 167 (506)
..||.+-..++ ++..+.+.+..++.. +. ..+..+........++++.+++++|.++.. ..++|+|+|+
T Consensus 33 ~iyLd~a~~~~-~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~------~v~~t~g~t~ 105 (424)
T PLN02855 33 LVYLDNAATSQ-KPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFINASTSR------EIVFTRNATE 105 (424)
T ss_pred eEEeeCccccC-CCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCCCCC------EEEEeCCHHH
Confidence 46777744443 334444555444322 11 111222334455567889999999996422 7899999999
Q ss_pred HHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHH----HHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHH
Q 048643 168 AILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCAL----QKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLD 243 (506)
Q Consensus 168 a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~----~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~ 243 (506)
++..++.......++ ++..|+++...|++. ...++..|+ +++.+|++.+ +.+|+++|+++|++.
T Consensus 106 al~~i~~~~~~~~~~-------~gd~vl~~~~~~~s~~~~~~~~a~~~g~---~v~~v~~~~~--~~~~~~~l~~~i~~~ 173 (424)
T PLN02855 106 AINLVAYTWGLANLK-------PGDEVILSVAEHHSNIVPWQLVAQKTGA---VLKFVGLTPD--EVLDVEQLKELLSEK 173 (424)
T ss_pred HHHHHHHHhhhhcCC-------CcCEEEECCCccHHHHHHHHHHHHHcCC---EEEEEecCCC--CCcCHHHHHHHhccC
Confidence 876655432100001 456788888888764 445667788 9999998753 479999999999754
Q ss_pred HhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCC
Q 048643 244 VEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTL 323 (506)
Q Consensus 244 ~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~ 323 (506)
+.+|++++.++++|.+.|+++|+++|+++|++++||++|+.+....+ .. .. ++|.++.++||+ +.|.
T Consensus 174 ------t~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~a~~~g~~~~~-~~----~~-~~d~~~~s~~K~-~gp~ 240 (424)
T PLN02855 174 ------TKLVATHHVSNVLGSILPVEDIVHWAHAVGAKVLVDACQSVPHMPVD-VQ----TL-GADFLVASSHKM-CGPT 240 (424)
T ss_pred ------ceEEEEeCccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCcCCC-ch----hc-CCCEEEeecccc-cCCC
Confidence 34899999999999999999999999999999999999976554332 11 11 589999999995 5688
Q ss_pred cceEEEEeCchhHHhhhcCCccccCCccccCC---CccCCC--CccccC-CCC-CCchHHHHHHHHhchhHHHHHHHHHH
Q 048643 324 DCCCLWVKDPSALVSSLSTNPEYLKNKATESK---QVVDYK--DWQITL-SRR-FRSLKLWLVIRNYGVANLRHFLRSHV 396 (506)
Q Consensus 324 ~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~---~~~~~~--~~~~~~-sr~-~~al~~~~~l~~~G~~g~~~~i~~~~ 396 (506)
|+|++++++.. + +.+ .+++........ ....+. ...++. +.. ...+.++.+++.+...|++++.++..
T Consensus 241 G~G~l~~~~~~-~-~~~---~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~ 315 (424)
T PLN02855 241 GIGFLWGKSDL-L-ESM---PPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIHEYEV 315 (424)
T ss_pred ccEEEEEchhh-h-hcC---CCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence 99999998542 2 222 222211100000 000000 001111 111 12256677777776778999999999
Q ss_pred HHHHHHHHHHHcCCCCc---c---------ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhc-CcEEEeeee
Q 048643 397 NMAKLFERLVASDKRVS---P---------SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINAS-GKAYMTHAV 463 (506)
Q Consensus 397 ~~a~~l~~~l~~~~~~~---p---------~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~ 463 (506)
++++++.+.|+++++++ | ++++|.+.... ..++.+.|.++ |+. +..+.
T Consensus 316 ~l~~~l~~~L~~~~g~~i~~~~~~~~~~r~~~v~~~~~~~~------------------~~~v~~~L~~~~gI~-v~~g~ 376 (424)
T PLN02855 316 ELGTYLYEKLSSVPGVRIYGPKPSEGVGRAALCAFNVEGIH------------------PTDLSTFLDQQHGVA-IRSGH 376 (424)
T ss_pred HHHHHHHHHHhcCCCEEEeCCCcccccCcccEEEEEECCcC------------------HHHHHHHhcccCCEE-Eechh
Confidence 99999999999888766 2 47888864321 24566777666 653 43321
Q ss_pred ---------ECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 048643 464 ---------CGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAF 498 (506)
Q Consensus 464 ---------~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l 498 (506)
..-..++|+|+ ++.+|++||++++++|+++.+.+
T Consensus 377 ~c~~~~~~~~g~~~~iRiS~-~~ynt~~di~~l~~~l~~~~~~~ 419 (424)
T PLN02855 377 HCAQPLHRYLGVNASARASL-YFYNTKEEVDAFIHALKDTIAFF 419 (424)
T ss_pred hhhHHHHHHhCCCCeEEEEe-ccCCCHHHHHHHHHHHHHHHHHH
Confidence 11135799999 68889999999999999988764
No 41
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.94 E-value=9.7e-24 Score=217.03 Aligned_cols=308 Identities=15% Similarity=0.101 Sum_probs=209.9
Q ss_pred HHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCC
Q 048643 134 ENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGI 213 (506)
Q Consensus 134 E~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~ 213 (506)
..++.+.+++++|.+. .++++|+|++|..++.+... ++..|+++...|++...+++..|+
T Consensus 65 ~~~l~~~lA~~~g~~~---------~~~~~g~t~a~~~al~~l~~-----------~gd~Vlv~~~~h~s~~~~~~~~G~ 124 (387)
T PRK09331 65 IADFHEDLAEFLGMDE---------ARVTHGAREGKFAVMHSLCK-----------KGDYVVLDGLAHYTSYVAAERAGL 124 (387)
T ss_pred HHHHHHHHHHHhCCCc---------EEEeCCHHHHHHHHHHHhcC-----------CCCEEEECCCchHHHHHHHHHcCC
Confidence 4455577888888853 47899999999887776532 566788899999999999999999
Q ss_pred CCCCeEEEecCCCCCcccCHHHHHHHHHHHHh-cCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeeccccccc
Q 048643 214 DLKNFRAIKTTKSSSYGLSPDSLLTQINLDVE-AGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSA 292 (506)
Q Consensus 214 g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~-~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~ 292 (506)
+++.+|.+.+.++.+|+++|++++++..+ .+..+.+|+++++++++|.+.|+++|+++|++||+++|||+||+.+.
T Consensus 125 ---~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~~l~~I~~la~~~g~~livD~a~~~g~ 201 (387)
T PRK09331 125 ---NVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLADAKKVAKVAHEYGIPFLLNGAYTVGR 201 (387)
T ss_pred ---EEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCcccCC
Confidence 99999983223578999999999976422 22346789999999999999999999999999999999999998776
Q ss_pred ccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCccccCCC-CC
Q 048643 293 CICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSR-RF 371 (506)
Q Consensus 293 ~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr-~~ 371 (506)
+..+.... ++|.++.++|||++.|.+.|++++++. .+.........|.... .. .+.++. ..
T Consensus 202 ~~~~~~~~------g~D~~~~s~~K~l~~~~~~G~l~~~~~-~i~~~~~~~~~~~~~~-------~~----~~~~~~~~~ 263 (387)
T PRK09331 202 MPVDGKKL------GADFIVGSGHKSMAASAPSGVLATTEE-YADKVFRTSRKFGVKE-------VE----LLGCTLRGA 263 (387)
T ss_pred cCCCHHHc------CCCEEEeeCcccccCCCCEEEEEECHH-HHhhcccccCCCcccc-------ee----eeceecCch
Confidence 54432211 689999999999999999999888653 3322222222222110 00 011111 12
Q ss_pred CchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc-----c---ceEEEeecCCCcccccccccchHHHHHHH
Q 048643 372 RSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS-----P---SAVMDKLKPKYENCHSQQLVTEEEAINEF 443 (506)
Q Consensus 372 ~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~-----p---~~v~f~~~~~~~~~~~~~~~~~~~~~~~~ 443 (506)
.+..++.++..+- +. .+.+++..++++++++.|+++++|+ + +++.|...... .........
T Consensus 264 ~~~~~~aal~~~~-~~-~~~~~~~~~~~~~l~~~L~~l~g~~~~~~~~~~~~i~~~~~~~~~---------~~~~~~~~~ 332 (387)
T PRK09331 264 PLVTLMASFPHVV-ER-VKRWDEEVKKARWFVDELEKIEGFKQLGEKPRNHDLMKFETPSFD---------EIAKKHKRR 332 (387)
T ss_pred HHHHHHHHHHHHH-HH-HHHHHHHHHHHHHHHHHHhcCCCEEEeccCcCcCCeEEEeCCchh---------HHhhhcccc
Confidence 3344555554432 11 2356777889999999999998876 1 45556543100 000000111
Q ss_pred HHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 048643 444 NRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAF 498 (506)
Q Consensus 444 ~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l 498 (506)
..++.+.|.++|+..+. .....++|+..+. .+++|+++++++|+++.+++
T Consensus 333 ~~~~~~~L~~~gI~~~~---~~~~~i~ri~~~g--~t~~di~~l~~aL~~i~~~~ 382 (387)
T PRK09331 333 GFFLYEELKKRGIHGIK---PGATKEFKLSTYG--LTWEQVEYVADAFKEIAEKY 382 (387)
T ss_pred chhHHHHHHHcCceEEc---cCCceEEEEEecc--CCHHHHHHHHHHHHHHHHhc
Confidence 24678888888874222 2234567777644 57889999999999987753
No 42
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.94 E-value=2.9e-24 Score=221.75 Aligned_cols=345 Identities=12% Similarity=0.042 Sum_probs=234.0
Q ss_pred ccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHH
Q 048643 97 AYFPSSGSIAGFLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAA 176 (506)
Q Consensus 97 ~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~a 176 (506)
=+.|++...+..+.+.+....... .++...++.+++.+++++++|.+.+. ..+++++||.++..++...
T Consensus 12 l~~pGP~~~~~~V~~a~~~~~~~~-----~~~~~~~~~~~~~~~l~~~~g~~~~~------~vi~~~~gt~a~~~a~~~~ 80 (401)
T PLN02409 12 LFVPGPVNIPERVLRAMNRPNEDH-----RSPAFPALTKELLEDVKYIFKTKSGT------PFIFPTTGTGAWESALTNT 80 (401)
T ss_pred eccCCCCCCCHHHHHHhcCCCCCC-----CCHHHHHHHHHHHHHHHHHhCCCCCC------EEEEeCCcHHHHHHHHHhc
Confidence 355777776666666555433221 36778889999999999999997542 5788889888876665443
Q ss_pred HHHHHHhhcccCCCCeEEEeCCCCchHH--HHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEE
Q 048643 177 RDRVLNKIGRENISKLVVYGSDQTHCAL--QKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLC 254 (506)
Q Consensus 177 r~~~~~~~~~~~~~~~~v~~s~~~H~s~--~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv 254 (506)
.. ++..|+++...|++. .+.++..|+ +++.++.+++ ..+|+++|++++++++. ..+.+|+
T Consensus 81 ~~-----------~Gd~Vlv~~~~~~~~~~~~~~~~~g~---~v~~v~~~~~--~~~~~~~l~~~l~~~~~--~~~k~v~ 142 (401)
T PLN02409 81 LS-----------PGDKVVSFRIGQFSLLWIDQMQRLNF---DVDVVESPWG--QGADLDILKSKLRQDTN--HKIKAVC 142 (401)
T ss_pred CC-----------CCCEEEEeCCCchhHHHHHHHHHcCC---ceEEEECCCC--CCCCHHHHHHHHhhCcC--CCccEEE
Confidence 22 556677777888765 577788899 9999998753 35899999999986320 1245889
Q ss_pred EeccCCCCCcccChhHHHHH--HHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeC
Q 048643 255 ATIGTTAITAVDPLKPLCDV--AKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKD 332 (506)
Q Consensus 255 ~t~gtt~tG~idpl~~I~~i--a~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~ 332 (506)
+++.+|+||.+.|+++|+++ |+++|++++||++++.+....+-... ++|.++.++|||++.|.|+|++++++
T Consensus 143 ~~~~~~~tG~~~~~~~i~~l~~~~~~g~~~vvD~v~s~g~~~id~~~~------~~D~~~~s~~K~l~~P~G~G~l~~~~ 216 (401)
T PLN02409 143 VVHNETSTGVTNDLAGVRKLLDCAQHPALLLVDGVSSIGALDFRMDEW------GVDVALTGSQKALSLPTGLGIVCASP 216 (401)
T ss_pred EEeecccccccCCHHHHHHHHhhhccCcEEEEEcccccCCcccccccc------CccEEEEcCccccCcCCCcceeEECH
Confidence 99999999999999999999 99999999999999765544331111 79999999999999999999999876
Q ss_pred chhHHhhhcC--CccccCCccccCCCccCCCCccccCCCCC-CchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcC
Q 048643 333 PSALVSSLST--NPEYLKNKATESKQVVDYKDWQITLSRRF-RSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASD 409 (506)
Q Consensus 333 ~~~l~~~~~~--~~~yl~~~~~~~~~~~~~~~~~~~~sr~~-~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~ 409 (506)
+. +.+.... .+.|+...... .....+.+. ..+-.. ..+.+-.+++.+...|++++.+++.++++++.+.|++.
T Consensus 217 ~~-~~~~~~~~~~~~~~~~~~~~--~~~~~g~~~-~~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~ 292 (401)
T PLN02409 217 KA-LEASKTAKSPRVFFDWADYL--KFYKLGTYW-PYTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLAVEAW 292 (401)
T ss_pred HH-HHHHhcCCCCCeecCHHHHH--HHHhcCCCC-CCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc
Confidence 53 2222111 11222100000 000000000 011111 12355566666677899999999999999999999887
Q ss_pred CCCc---c-------ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeEC-CEEEEEEEecCCC
Q 048643 410 KRVS---P-------SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCG-GIYAMRFAVGATL 478 (506)
Q Consensus 410 ~~~~---p-------~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~-g~~~lR~~~~~~~ 478 (506)
+++ | .+++|++...- + ..++.+.+.++..+.+.++... ...+||++.+.+
T Consensus 293 -g~~~~~~~~~~~s~~v~~~~~p~~~----------~-------~~~l~~~l~~~~~i~i~~G~~~~~~~~~Rig~~g~- 353 (401)
T PLN02409 293 -GLKLCTKKPEWRSDTVTAVVVPEGI----------D-------SAEIVKNAWKKYNLSLGLGLNKVAGKVFRIGHLGN- 353 (401)
T ss_pred -CCeeccCChhhcccceEEEeCCCCC----------C-------HHHHHHHHHHhCCEEEEcCCCcccCCEEEEcCCCC-
Confidence 666 2 44567653220 1 2345555544434455555433 356899999875
Q ss_pred CCHHHHHHHHHHHHHHHHHHH
Q 048643 479 TEERHVMVAWTMVQEQLEAFL 499 (506)
Q Consensus 479 tt~edi~~li~~l~~~~~~l~ 499 (506)
++++||..++++|.++..++.
T Consensus 354 ~~~~~~~~~~~~~~~~l~~~g 374 (401)
T PLN02409 354 VNELQLLGALAGVEMVLKDVG 374 (401)
T ss_pred CCHHHHHHHHHHHHHHHHHcC
Confidence 688899999999999876654
No 43
>PRK14012 cysteine desulfurase; Provisional
Probab=99.93 E-value=4e-24 Score=221.33 Aligned_cols=303 Identities=14% Similarity=0.111 Sum_probs=201.5
Q ss_pred HHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHH-
Q 048643 132 ELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQI- 210 (506)
Q Consensus 132 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~- 210 (506)
..-.++.+++++++|.+.+ ..++++|||+++..++.+......+ ++..|+++..+|+++...++.
T Consensus 49 ~~~~~~r~~ia~~~g~~~~-------~v~~~~g~t~al~~~l~~l~~~~~~-------~gd~Vi~~~~~~~s~~~~~~~~ 114 (404)
T PRK14012 49 EAVDIARNQIADLIGADPR-------EIVFTSGATESDNLAIKGAAHFYQK-------KGKHIITSKTEHKAVLDTCRQL 114 (404)
T ss_pred HHHHHHHHHHHHHcCcCcC-------eEEEeCCHHHHHHHHHHHHHHhhcC-------CCCEEEEecCccHHHHHHHHHH
Confidence 3344567889999998765 6899999999998888766432111 456788899999988766654
Q ss_pred --hCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeeccc
Q 048643 211 --VGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAY 288 (506)
Q Consensus 211 --~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~ 288 (506)
.|+ +++.|++++ +|.+|+++|+++|++++ .+|+++..++++|.+.|+++|+++|+++|+++|+|+|+
T Consensus 115 ~~~g~---~~~~v~~~~--~g~~d~~~l~~~i~~~t------~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~vivD~a~ 183 (404)
T PRK14012 115 EREGF---EVTYLDPQS--NGIIDLEKLEAAMRDDT------ILVSIMHVNNEIGVIQDIAAIGEICRERGIIFHVDAAQ 183 (404)
T ss_pred HhCCC---EEEEEccCC--CCcCCHHHHHHhcCCCC------EEEEEECcCCCccchhhHHHHHHHHHHcCCEEEEEcch
Confidence 488 899999875 57999999999997643 38999999999999999999999999999999999999
Q ss_pred ccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCccccC-
Q 048643 289 AGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITL- 367 (506)
Q Consensus 289 gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~- 367 (506)
+.+....+- .. ..+|.+++++||++ .|.|+|++++++.... ...+.+...... ..++.
T Consensus 184 ~~g~~~~~~-~~-----~~~D~~~~s~~K~~-gp~g~G~l~~~~~~~~----~~~~~~~g~~~~----------~~~~~g 242 (404)
T PRK14012 184 SVGKVPIDL-SK-----LKVDLMSFSAHKIY-GPKGIGALYVRRKPRV----RLEAQMHGGGHE----------RGMRSG 242 (404)
T ss_pred hcCCcccCc-cc-----CCCCEEEEehhhcc-CCCceEEEEEecCCCC----CCCceecCCCcc----------CCccCC
Confidence 876654331 11 16999999999955 5789999999875421 111111111000 00111
Q ss_pred CCCC-CchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc---------c--ceEEEeecCCCcccccccccc
Q 048643 368 SRRF-RSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS---------P--SAVMDKLKPKYENCHSQQLVT 435 (506)
Q Consensus 368 sr~~-~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---------p--~~v~f~~~~~~~~~~~~~~~~ 435 (506)
+... ..+.+-.++... ..++.++.++..++++++.+.|++.+++. | ..++|...+.
T Consensus 243 t~~~~~~~~l~~al~~~-~~~~~~~~~~~~~l~~~l~~~L~~~~~i~~~~~~~~~~~~~~~~~~~~~~~----------- 310 (404)
T PRK14012 243 TLPTHQIVGMGEAARIA-KEEMATENERIRALRDRLWNGIKDIEEVYLNGDLEQRVPGNLNVSFNYVEG----------- 310 (404)
T ss_pred CcCHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCEEEEEEeCcCH-----------
Confidence 1110 112222333332 34567788899999999999999877654 1 2344544221
Q ss_pred hHHHHHHHHHHHHHHHHhcCcEEEeeee--------------ECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 048643 436 EEEAINEFNRELLESINASGKAYMTHAV--------------CGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAFL 499 (506)
Q Consensus 436 ~~~~~~~~~~~l~~~l~~~g~~~~~~~~--------------~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l~ 499 (506)
+.+...+.+.....|..+ .+.. ......+|+++ ++.+|++|||++++.|+++.+.+.
T Consensus 311 -----~~~~~~l~~~~i~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~iRls~-~~~~t~~dvd~~~~~l~~~~~~~~ 381 (404)
T PRK14012 311 -----ESLIMALKDLAVSSGSAC-TSASLEPSYVLRALGLNDELAHSSIRFSL-GRFTTEEEIDYAIELVRKSIGKLR 381 (404)
T ss_pred -----HHHHHhCCCeEEEchhhh-CCCCCCCCHHHHHcCCChhhcCceEEEEe-cCCCCHHHHHHHHHHHHHHHHHHH
Confidence 122222211111122211 1110 01236899999 567899999999999999887763
No 44
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.93 E-value=1.1e-22 Score=207.38 Aligned_cols=301 Identities=14% Similarity=0.098 Sum_probs=203.5
Q ss_pred HHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCCC
Q 048643 136 IVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGIDL 215 (506)
Q Consensus 136 ~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~ 215 (506)
++.+.+++++|.+ ..++++|+++++..++.+... ++..|+++..+|++...+++..|+
T Consensus 48 ~l~~~la~~~g~~---------~i~~~~g~t~al~~~l~~~~~-----------~gd~Vl~~~~~~~~~~~~~~~~g~-- 105 (361)
T cd06452 48 DFHHDLAEFLGMD---------EARVTPGAREGKFAVMHSLCE-----------KGDWVVVDGLAHYTSYVAAERAGL-- 105 (361)
T ss_pred HHHHHHHHHcCCc---------eEEEeCCHHHHHHHHHHHhcC-----------CCCEEEEcCCcchHHHHHHHhcCC--
Confidence 4446688888882 578999999998877766432 566788899999999999999999
Q ss_pred CCeEEEecCCCCCcccCHHHHHHHHHHHHhc-CCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeeccccccccc
Q 048643 216 KNFRAIKTTKSSSYGLSPDSLLTQINLDVEA-GLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACI 294 (506)
Q Consensus 216 ~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~-g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~~ 294 (506)
+++.||++.++++.+|+++|++++++..+. +..+.+|+++++++++|.++|+++|+++|+++|+++|||+||+.+...
T Consensus 106 -~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~~ 184 (361)
T cd06452 106 -NVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHDAKKIAKVCHEYGVPLLLNGAYTVGRMP 184 (361)
T ss_pred -EEEEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeeccHHHHHHHHHHcCCeEEEECCcccCCcC
Confidence 999999986545699999999999764322 234668888999999999999999999999999999999999865433
Q ss_pred CccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCcc-ccCCCC-CC
Q 048643 295 CPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQ-ITLSRR-FR 372 (506)
Q Consensus 295 ~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~-~~~sr~-~~ 372 (506)
.+. .. . ++|.++.++||+++.|.++|++++++. ... .+.....++... ..+ +..+.+ ..
T Consensus 185 ~~~-~~----~-~~d~~~~s~~K~l~~~~~~G~l~~~~~-~~~-~l~~~~~~~~~~-----------~~~~~~~~~~~~~ 245 (361)
T cd06452 185 VSG-KE----L-GADFIVGSGHKSMAASAPIGVLATTEE-WAD-IVFRTSQMFKIK-----------EVELLGCTLRGAP 245 (361)
T ss_pred CCH-HH----c-CCCEEEecCCccccCCCCeEEEEECHH-HHH-HHhccccccccc-----------eeeeeccccCchH
Confidence 221 11 1 589999999999998889998887643 332 222211111100 001 111111 22
Q ss_pred chHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc-----c---ceEEEeecCCCcccccccccchHHH-HHHH
Q 048643 373 SLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS-----P---SAVMDKLKPKYENCHSQQLVTEEEA-INEF 443 (506)
Q Consensus 373 al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~-----p---~~v~f~~~~~~~~~~~~~~~~~~~~-~~~~ 443 (506)
+..++.++..+ .+. .+.+.+..++++++++.|+++|+++ + +++.|+...-. .... ....
T Consensus 246 ~~~~~~al~~~-~~~-~~~~~~~~~~~~~l~~~L~~l~g~~v~~~~~~~~n~~~~~~~~~~----------~~~~~~~~~ 313 (361)
T cd06452 246 LVTLMASFPHV-KER-VKRWDEEVEKARWFVAELEKIEGIKQLGEKPKNHDLMFFETPSFD----------EIAKKHKRR 313 (361)
T ss_pred HHHHHHHHHHH-HHH-HHHHHHHHHHHHHHHHHHhcCCCeEEECCCCCCCceEEEEcCCcc----------hhhhhcccc
Confidence 34455555443 233 3445666777899999999998876 1 56667653110 0000 0011
Q ss_pred HHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 048643 444 NRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQL 495 (506)
Q Consensus 444 ~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~ 495 (506)
..++.+.|.++|+. +. ......++|++++. .++++++.++++|+++.
T Consensus 314 ~~~~~~~L~~~gI~-~~--~~~~~~~~ri~~~g--~~~e~~~~l~~al~~~~ 360 (361)
T cd06452 314 GYFLYSELKKRGIH-GI--KPGLTRYFKLSTYG--LTWEQVEYVVDAFKEIA 360 (361)
T ss_pred chhHHHHHHHcCce-EE--cCCCceEEEEEecC--CCHHHHHHHHHHHHHHh
Confidence 23577888778875 21 11223588998843 47789999999998764
No 45
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.92 E-value=2.3e-23 Score=212.67 Aligned_cols=337 Identities=9% Similarity=0.030 Sum_probs=223.4
Q ss_pred cCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHH
Q 048643 98 YFPSSGSIAGFLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAAR 177 (506)
Q Consensus 98 ~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar 177 (506)
+.|++......+.+.+...+. .+ .+....+-+++.+.+++++|.+++. ...++|+|||+++..++....
T Consensus 7 ~~pgp~~~~~~v~~~~~~~~~----~~--~~~~~~~~~~~r~~la~l~~~~~~~-----~~i~~t~~~t~al~~~~~~l~ 75 (363)
T TIGR02326 7 LTPGPLTTSRTVKEAMLFDWC----TW--DSDYNIVVEQIRQQLLALATAEEGY-----TSVLLQGSGTFAVEAVIGSAV 75 (363)
T ss_pred ecCCCCCCCHHHHHHhCCCCC----CC--ChHHHHHHHHHHHHHHHHhCCCCCc-----eEEEEcCCCHHHHHHHHHhcC
Confidence 456666655555444433332 22 2456666777899999999997531 157899999999987765543
Q ss_pred HHHHHhhcccCCCCeEEEeCCCCchH-HHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEe
Q 048643 178 DRVLNKIGRENISKLVVYGSDQTHCA-LQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCAT 256 (506)
Q Consensus 178 ~~~~~~~~~~~~~~~~v~~s~~~H~s-~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t 256 (506)
.. ++.+++++...|.+ +.+.++..|+ +++.||+++ ++.+|+++|+++++++++ +.+|+++
T Consensus 76 ~~----------~~~vlv~~~~~~~~~~~~~a~~~g~---~~~~v~~~~--~~~~d~~~l~~~l~~~~~----~~~v~~~ 136 (363)
T TIGR02326 76 PK----------DGKLLVVINGAYGARIVQIAEYLGI---PHHVVDTGE--VEPPDVVEVEAILAADPA----ITHIALV 136 (363)
T ss_pred CC----------CCeEEEEeCChhhHHHHHHHHHcCC---ceEEEeCCC--CCCCCHHHHHHHHhhCCC----ccEEEEE
Confidence 21 34455556555555 4577888999 999999875 458999999999876421 3367888
Q ss_pred ccCCCCCcccChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhH
Q 048643 257 IGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSAL 336 (506)
Q Consensus 257 ~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l 336 (506)
+.+|+||.+.|+++|+++|++||++++||++++.+....+- . .+ ++|.++.++|||++.|.|.|+++++++..
T Consensus 137 ~~~~~tG~~~~i~~I~~l~~~~g~~livD~~~~~g~~~~~~-~----~~-~~D~~~~s~~K~l~~p~G~G~l~~~~~~~- 209 (363)
T TIGR02326 137 HCETTTGILNPIEAVAKLAHRHGKVTIVDAMSSFGGIPIDI-A----EL-HIDYLISSANKCIQGVPGFGFVIARQAEL- 209 (363)
T ss_pred eecCCccccCcHHHHHHHHHHcCCEEEEEccccccCcccch-h----hc-CccEEEecCccccccCCcceEEEECHHHH-
Confidence 88999999999999999999999999999988755443321 1 11 68999999999999999999999976532
Q ss_pred HhhhcCCcc-ccCCccccCCCccCCCCccccCCCCC-----CchHHHHHHHHhchh-HHHHHHHHHHHHHHHHHHHHHcC
Q 048643 337 VSSLSTNPE-YLKNKATESKQVVDYKDWQITLSRRF-----RSLKLWLVIRNYGVA-NLRHFLRSHVNMAKLFERLVASD 409 (506)
Q Consensus 337 ~~~~~~~~~-yl~~~~~~~~~~~~~~~~~~~~sr~~-----~al~~~~~l~~~G~~-g~~~~i~~~~~~a~~l~~~l~~~ 409 (506)
.+......+ |+... ..+....+. ...+++ ..+.+..+++.+..+ +++++.+++.++++++.+.|++.
T Consensus 210 ~~~~~~~~~~~~~~~-----~~~~~~~~~-~~~~~ft~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~ 283 (363)
T TIGR02326 210 AACKGNARSLSLDLY-----DQWRCMEDN-HGKWRFTSPTHVVHAFAQALLELEKEGGVAARHQRYQQNQKTLVAGMRAL 283 (363)
T ss_pred HHhhcCCCceeecHH-----HHHHHHhcc-CCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc
Confidence 221111111 11000 000000000 011111 224556667666555 58888999999999999999887
Q ss_pred CCCc---c-----c-eEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCC
Q 048643 410 KRVS---P-----S-AVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTE 480 (506)
Q Consensus 410 ~~~~---p-----~-~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt 480 (506)
+++ + + +++|++.+.. .....++.+.|.++|+. +.++...+..++|++++. +.+
T Consensus 284 -g~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~v~~~L~~~gi~-v~~g~~~~~~~iRi~~~~-~~~ 345 (363)
T TIGR02326 284 -GFEPLLDDEIQSPIITSFYSPEDP---------------DYRFADFYQRLKEQGFV-IYPGKVSQVDCFRIGNIG-EVD 345 (363)
T ss_pred -CCeeccCcccCCceEEEEECCCCC---------------CCCHHHHHHHHHHCCEE-EECCcCCCCCEEEEecCC-CCC
Confidence 665 1 2 4567764320 00134567777777764 444432334689999865 457
Q ss_pred HHHHHHHHHHHHHHH
Q 048643 481 ERHVMVAWTMVQEQL 495 (506)
Q Consensus 481 ~edi~~li~~l~~~~ 495 (506)
.+|+++++++|+++.
T Consensus 346 ~edv~~~l~~l~~~l 360 (363)
T TIGR02326 346 AADITRLLTAIGKAM 360 (363)
T ss_pred HHHHHHHHHHHHHHh
Confidence 789999999998764
No 46
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.92 E-value=5.6e-23 Score=212.87 Aligned_cols=346 Identities=11% Similarity=0.037 Sum_probs=217.2
Q ss_pred CCccccCCCCCCHHHHHHHHHHhhcC----CCCcccccC-hhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchH
Q 048643 93 PNYFAYFPSSGSIAGFLGEMLSSGFN----VVGFNWISS-PAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCE 167 (506)
Q Consensus 93 p~~~~~~~~~~~~~~~~~~~l~~~~n----~~~~~~~~~-p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~ 167 (506)
..||++-..++. |..+.+.+..+++ .....+..+ .....++.+. +.+ +++|.+++ ..++++|+|+
T Consensus 28 ~iyld~~a~g~~-p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~l~g~~~~-------~v~~~~~~t~ 97 (406)
T TIGR01814 28 VIYLDGNSLGLM-PKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESL-LKL-RLVGAKED-------EVVVMNTLTI 97 (406)
T ss_pred cEEecCCCcCcC-cHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhh-ccc-cccCCCCC-------cEEEeCCchH
Confidence 356665444443 4455555544332 211122221 1223344333 335 88998765 6899999998
Q ss_pred HHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHH----HHHHhCCCCCCe----EEEecCCCCCcccCHHHHHHH
Q 048643 168 AILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQK----AAQIVGIDLKNF----RAIKTTKSSSYGLSPDSLLTQ 239 (506)
Q Consensus 168 a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~k----a~~~~G~g~~~v----~~v~~~~~~~~~~d~~~L~~~ 239 (506)
++..++..... .+.++.+|+++...|.|... .++..|+ ++ +.++.+. ++.+|++++++.
T Consensus 98 ~l~~~~~~~~~--------~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~---~~~~~~~~~~~~~--~g~~~~~~l~~~ 164 (406)
T TIGR01814 98 NLHLLLASFYK--------PTPKRYKILLEAKAFPSDHYAIESQLQLHGL---TVEESMVQIEPRE--EETLRLEDILDT 164 (406)
T ss_pred HHHHHHHHhcC--------CcCCccEEEecCCCCChHHHHHHHHHHhcCC---CcccceEEeccCC--CCccCHHHHHHH
Confidence 87666554311 01123467888899988544 4456687 66 4566543 468999999998
Q ss_pred HHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCcccc
Q 048643 240 INLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWF 319 (506)
Q Consensus 240 i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l 319 (506)
++.. ...+.+|++++.++.+|.+.|+++|+++|+++|++++||++++.+.+..+-.. -++|.+++++|||+
T Consensus 165 ~~~~---~~~t~lv~~~~v~~~tG~~~~~~~i~~~~~~~g~~~~vD~aq~~G~~~id~~~------~gvD~~~~s~hK~l 235 (406)
T TIGR01814 165 IEKN---GDDIAVILLSGVQYYTGQLFDMAAITRAAHAKGALVGFDLAHAVGNVPLDLHD------WGVDFACWCTYKYL 235 (406)
T ss_pred HHhc---CCCeEEEEEeccccccceecCHHHHHHHHHHcCCEEEEEcccccCCccccccc------CCCCEEEEcCcccc
Confidence 8642 12356899999999999999999999999999999999999998877654211 17999999999999
Q ss_pred CCCCcceEEEEeCchhHHhhhcCCccccCCccccCC---CccCCCCccccCC-CCC-CchHHHHHHHHhchhHHHHHHHH
Q 048643 320 FTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESK---QVVDYKDWQITLS-RRF-RSLKLWLVIRNYGVANLRHFLRS 394 (506)
Q Consensus 320 ~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~---~~~~~~~~~~~~s-r~~-~al~~~~~l~~~G~~g~~~~i~~ 394 (506)
+.|.| |+++++.+... ........|......... .........++.+ ... ..+.+-.+++.+...|++++.++
T Consensus 236 ~g~pG-~~l~v~~~~~~-~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~ 313 (406)
T TIGR01814 236 NAGPG-AGAFVHEKHAH-TERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFDQAGMEALRKK 313 (406)
T ss_pred CCCCC-eEEEEehhhhh-hcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 87768 66666554321 111111111111000000 0000000111111 111 22345556666667788999999
Q ss_pred HHHHHHHHHHHHHcC----CCCc---c-------ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEe
Q 048643 395 HVNMAKLFERLVASD----KRVS---P-------SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMT 460 (506)
Q Consensus 395 ~~~~a~~l~~~l~~~----~~~~---p-------~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~ 460 (506)
..++++++.+.|++. ++++ | ++++|++. .. .+++.+.|.++|++ +.
T Consensus 314 ~~~l~~~l~~~l~~~~~~~~~~~i~~~~~~~~r~~~v~~~~~-~~------------------~~~~~~~L~~~gi~-v~ 373 (406)
T TIGR01814 314 SLLLTDYLEELIKARCGGPPVLTIITPRDHAQRGCQLSLTHP-VP------------------GKAVFQALIKRGVI-GD 373 (406)
T ss_pred HHHHHHHHHHHHHhhcCCCCceEEeCCCChhhcCCeEEEEec-CC------------------HHHHHHHHHHCCEE-Ee
Confidence 999999999999875 3464 2 57888764 21 24566777777763 33
Q ss_pred eeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 048643 461 HAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQL 495 (506)
Q Consensus 461 ~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~ 495 (506)
..+...+|+++++.++|++||++++++|+++.
T Consensus 374 ---~~~~~~iRiS~~~~~nt~~did~l~~~l~~~~ 405 (406)
T TIGR01814 374 ---KREPSVIRVAPVPLYNTFVDVYDAVNVLEEIL 405 (406)
T ss_pred ---ccCCCeEEEechhccCCHHHHHHHHHHHHHHh
Confidence 22335899999767889999999999998763
No 47
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.92 E-value=5e-23 Score=212.80 Aligned_cols=332 Identities=13% Similarity=0.105 Sum_probs=215.5
Q ss_pred CccccCCCCCCHHHHHHHHHHhhcCCC----CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHH
Q 048643 94 NYFAYFPSSGSIAGFLGEMLSSGFNVV----GFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAI 169 (506)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~l~~~~n~~----~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~ 169 (506)
.||.+-..++.+..+ .+.+...+... ...|..+....++..++.+.+++++|.+.. ..++++|+|+++
T Consensus 19 ~yl~~~~~~~~p~~v-~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~~~~~-------~v~~~~~~t~~l 90 (397)
T TIGR01976 19 VFFDNPAGTQIPQSV-ADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLLNADPP-------EVVFGANATSLT 90 (397)
T ss_pred EEecCCccCCCCHHH-HHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHcCCCCC-------eEEEeCCHHHHH
Confidence 566664333333343 44443333211 122333334556677888999999998754 578888888876
Q ss_pred HHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHH----HHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHh
Q 048643 170 LCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQ----KAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVE 245 (506)
Q Consensus 170 l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~----ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~ 245 (506)
..++.+.... . .++..|+++...|+|.. +.++..|+ +++.++++++ ++.+|+++|++++++.
T Consensus 91 ~~~~~~~~~~-~-------~~gd~vl~~~~~~~s~~~~~~~~~~~~g~---~~~~~~~~~~-~~~~~~~~l~~~i~~~-- 156 (397)
T TIGR01976 91 FLLSRAISRR-W-------GPGDEVIVTRLDHEANISPWLQAAERAGA---KVKWARVDEA-TGELHPDDLASLLSPR-- 156 (397)
T ss_pred HHHHHHHHhc-C-------CCCCEEEEcCCchHhHHHHHHHHHHhcCC---EEEEEecccc-CCCcCHHHHHHhcCCC--
Confidence 5444433211 0 15567888888997754 55677899 9999998753 4689999999998654
Q ss_pred cCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcc
Q 048643 246 AGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDC 325 (506)
Q Consensus 246 ~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~ 325 (506)
+.+|+++.++|++|.+.|+++|+++|++||++++||++++.+....+ ... -++|.++.++|||++ | .+
T Consensus 157 ----~~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~~-~~~-----~~~d~~~~s~~K~~g-~-~~ 224 (397)
T TIGR01976 157 ----TRLVAVTAASNTLGSIVDLAAITELVHAAGALVVVDAVHYAPHGLID-VQA-----TGADFLTCSAYKFFG-P-HM 224 (397)
T ss_pred ----ceEEEEeCCCCCCCccCCHHHHHHHHHHcCCEEEEehhhhccccCCC-HHH-----cCCCEEEEechhhcC-C-ce
Confidence 34899999999999999999999999999999999999965433222 111 168999999999986 4 37
Q ss_pred eEEEEeCchhHHhhhcC-CccccCCccccCCCccCCCCcccc-CCCCC-CchHHHHHHHHhchh--------------HH
Q 048643 326 CCLWVKDPSALVSSLST-NPEYLKNKATESKQVVDYKDWQIT-LSRRF-RSLKLWLVIRNYGVA--------------NL 388 (506)
Q Consensus 326 g~~~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~-~sr~~-~al~~~~~l~~~G~~--------------g~ 388 (506)
|++++++.. + ..+.. ...|.... ....++ +++.+ ..+.+..+++.+... ++
T Consensus 225 G~l~~~~~~-~-~~l~~~~~~~~~~~----------~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~ 292 (397)
T TIGR01976 225 GILWGRPEL-L-MNLPPYKLTFSYDT----------GPERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASF 292 (397)
T ss_pred EEEEEcHHH-H-hhCCCccccCccCC----------CcchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHH
Confidence 888887542 2 22211 11111110 000111 22222 224455666554322 36
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCc---c-------ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEE
Q 048643 389 RHFLRSHVNMAKLFERLVASDKRVS---P-------SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAY 458 (506)
Q Consensus 389 ~~~i~~~~~~a~~l~~~l~~~~~~~---p-------~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~ 458 (506)
++..++..++++++.+.|+++++++ | +++.|.+.+. ...++.++|.+.|+.
T Consensus 293 ~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~l~~~L~~~gI~- 353 (397)
T TIGR01976 293 QAIDAYENRLAEYLLVGLSDLPGVTLYGVARLAARVPTVSFTVHGL------------------PPQRVVRRLADQGID- 353 (397)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccCCCceEEEEeCCc------------------CHHHHHHHHHHCCeE-
Confidence 7778888999999999999887665 1 5677766432 124577777777764
Q ss_pred Eeee-e-----------ECCEEEEEEEecCCCCCHHHHHHHHHHH
Q 048643 459 MTHA-V-----------CGGIYAMRFAVGATLTEERHVMVAWTMV 491 (506)
Q Consensus 459 ~~~~-~-----------~~g~~~lR~~~~~~~tt~edi~~li~~l 491 (506)
+... . .....++|++++ +.+|++||++++++|
T Consensus 354 v~~~~~~~~~~~~~~~~~~~~~~iRis~~-~~~t~~di~~l~~~l 397 (397)
T TIGR01976 354 AWAGHFYAVRLLRRLGLNDEGGVVRVGLA-HYNTAEEVDRLLEAL 397 (397)
T ss_pred EEeCccchHHHHHHhCCCCCCCeEEEEee-ccCCHHHHHHHHHhC
Confidence 4322 1 113468999995 567888999999864
No 48
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.92 E-value=4e-23 Score=204.12 Aligned_cols=224 Identities=18% Similarity=0.175 Sum_probs=166.6
Q ss_pred CCCCCccccCCCCCCHHHHHHHH---HHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCch
Q 048643 90 WQSPNYFAYFPSSGSIAGFLGEM---LSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTC 166 (506)
Q Consensus 90 ~~~p~~~~~~~~~~~~~~~~~~~---l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt 166 (506)
...|-|+++...++..+.++..+ +..++.++-..+.....-.++| ++++.+|+++|.++. +.+||+|+|
T Consensus 41 ~~~~vyld~~at~p~~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~E-~aR~~VAklInAd~~-------dIiFts~AT 112 (428)
T KOG1549|consen 41 GTRPVYLDNQATGPMDPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAVE-AAREQVAKLINADPS-------DIVFTSGAT 112 (428)
T ss_pred CCccEEEecCcCCCCCHHHHHHHHHHHHHhhcCCCccccchhhhHHHH-HHHHHHHHHhCCCCC-------cEEEeCCch
Confidence 34677788776666666665443 3333332211111112223354 468999999999886 799999999
Q ss_pred HHHHHHHHH-HHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHh---CCCCCCeEEEecCCCCCcccCHHHHHHHHHH
Q 048643 167 EAILCTLTA-ARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIV---GIDLKNFRAIKTTKSSSYGLSPDSLLTQINL 242 (506)
Q Consensus 167 ~a~l~al~~-ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~---G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~ 242 (506)
++|.+++.. ++.. + . + .+..|++...+|.|+..+++.+ |+ .|+.||++. ++..|++.|++.|++
T Consensus 113 Es~Nlvl~~v~~~~--~---~-~-~~k~iitl~~eH~~v~~s~~~l~~~g~---~Vt~lpv~~--~~~~d~~~~~~~i~~ 180 (428)
T KOG1549|consen 113 ESNNLVLKGVARFF--G---D-K-TKKHIITLQTEHPCVLDSCRALQEEGL---EVTYLPVED--SGLVDISKLREAIRS 180 (428)
T ss_pred HHHHHHHHHhhccc--c---c-c-ccceEEEecccCcchhHHHHHHHhcCe---EEEEeccCc--cccccHHHHHHhcCC
Confidence 999877664 2321 1 1 1 2227888899999999988776 76 999999983 579999999999999
Q ss_pred HHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCC
Q 048643 243 DVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTT 322 (506)
Q Consensus 243 ~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p 322 (506)
+++ +|.+.+.++..|.+.|++||+.+|+++|+.+|+|+|++.+....+- +.+ .+|.++++.|||++.|
T Consensus 181 ~T~------lv~I~~Vnn~~gv~~Pv~EI~~icr~~~v~v~~DaAQavG~i~vDV-~el-----n~D~~s~s~HK~ygp~ 248 (428)
T KOG1549|consen 181 KTR------LVSIMHVNNEIGVLQPVKEIVKICREEGVQVHVDAAQAVGKIPVDV-QEL-----NADFLSISAHKIYGPP 248 (428)
T ss_pred Cce------EEEEEecccCccccccHHHHHHHhCcCCcEEEeehhhhcCCccccH-HHc-----CchheeeecccccCCC
Confidence 765 8999999999999999999999999999999999999998877753 222 8999999999999987
Q ss_pred CcceEEEEeCchhHHhhhcCCccccCC
Q 048643 323 LDCCCLWVKDPSALVSSLSTNPEYLKN 349 (506)
Q Consensus 323 ~~~g~~~~r~~~~l~~~~~~~~~yl~~ 349 (506)
. +|++|+|.+.. .+...+++..+
T Consensus 249 ~-iGaLYvr~~~~---~~~~~p~~~GG 271 (428)
T KOG1549|consen 249 G-IGALYVRRKRP---RLRVEPPLSGG 271 (428)
T ss_pred c-ceEEEEccCCC---cccccCcccCC
Confidence 6 99999996221 23344555543
No 49
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.92 E-value=6.9e-22 Score=202.15 Aligned_cols=303 Identities=14% Similarity=0.106 Sum_probs=202.7
Q ss_pred HHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCCC
Q 048643 136 IVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGIDL 215 (506)
Q Consensus 136 ~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~ 215 (506)
++.+.+++++|.+. ..+++||++++..++.+... ++..|+++...|++...+++..|+
T Consensus 55 ~~~e~lA~~~g~~~---------~~i~~g~~~a~~~~~~~l~~-----------~gd~Vl~~~~~h~s~~~~~~~~g~-- 112 (370)
T TIGR02539 55 DFLEDLAEFLGMDE---------ARVTHGAREGKFAVMHALCK-----------EGDWVVLDGLAHYTSYVAAERAGL-- 112 (370)
T ss_pred HHHHHHHHHhCCCc---------eEEECChHHHHHHHHHHhhC-----------CCCEEEECCcccHHHHHHHHHcCC--
Confidence 44566899999874 36789999998776665532 566788899999999999999999
Q ss_pred CCeEEEecCCCCCcccCHHHHHHHHHHHHhc-CCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeeccccccccc
Q 048643 216 KNFRAIKTTKSSSYGLSPDSLLTQINLDVEA-GLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACI 294 (506)
Q Consensus 216 ~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~-g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~~ 294 (506)
+++.+|.+.+.++.+|+++|++++++.++. +..+.+|+++.+++++|.+.|+++|+++|++||++++||+||+.+.+.
T Consensus 113 -~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~l~~i~~la~~~~~~livDea~~~g~~~ 191 (370)
T TIGR02539 113 -NVKEVPHTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPDAGKVAKVCREKGVPLLLNCAYTVGRMP 191 (370)
T ss_pred -EEEEEecCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccCHHHHHHHHHHcCCeEEEECccccCCcC
Confidence 999999865446899999999999764322 124568888999999999999999999999999999999999875332
Q ss_pred CccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCC-ccccCCccccCCCccCCCCccccCCCC-CC
Q 048643 295 CPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTN-PEYLKNKATESKQVVDYKDWQITLSRR-FR 372 (506)
Q Consensus 295 ~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~-~~yl~~~~~~~~~~~~~~~~~~~~sr~-~~ 372 (506)
.+. .. ..+|.++.++|||++.+.++|++++++. .. +.+... .+|..... . .+..+.. ..
T Consensus 192 ~~~-~~-----~~~di~v~s~sK~~~~~g~~G~l~~~~~-~i-~~l~~~~~~~~~~~~-------~----~~~~~~~~~~ 252 (370)
T TIGR02539 192 VSA-KE-----IGADFIVGSGHKSMAASGPCGVLGMSEE-WE-DIVLRKSRYSPVKEV-------E----LLGCTSRGAP 252 (370)
T ss_pred CCH-HH-----cCCCEEEeeCcccccCCCCEEEEEECHH-HH-hhhcccccCCcccee-------e----eecccccccH
Confidence 221 11 1589999999999997777898887643 32 233222 22221110 0 0111111 12
Q ss_pred chHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc-----c---ceEEEeecCCCcccccccccchHHHHHHHH
Q 048643 373 SLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS-----P---SAVMDKLKPKYENCHSQQLVTEEEAINEFN 444 (506)
Q Consensus 373 al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~-----p---~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (506)
+..++.++... .+.+ +..++..+++++|++.|++. +|+ | +++.|+..... ..........
T Consensus 253 ~~~~~~al~~~-~~~l-~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~s~t~~v~~~~~~~~---------~~~~~~~~~~ 320 (370)
T TIGR02539 253 IVTMMASFPHV-VERV-KRWDEEVKKTRWFVAELEDI-GFIQLGQKPKEHDLVKFETPGFH---------EIAQKHKRRG 320 (370)
T ss_pred HHHHHHHHHHH-HHHH-HHHHHHHHHHHHHHHHHHhC-CcEEEccCCCcCceEEEECCchh---------HHhhhhcccc
Confidence 23334444321 2222 23445566678999999998 564 3 77777653210 0000001123
Q ss_pred HHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 048643 445 RELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEA 497 (506)
Q Consensus 445 ~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~ 497 (506)
..+.+.|.++|+..+.+ ....++|++++ . .+++++++++++|+++.++
T Consensus 321 ~~~~~~L~e~GI~~ir~---~~~~~iRis~~-~-~t~e~i~~l~~~L~~~~~~ 368 (370)
T TIGR02539 321 YFLYEELKKRGIHGIRS---GQTKYFKLSVY-G-LTKEQVEYVVDSFEEIVEE 368 (370)
T ss_pred HHHHHHHHhCCCccccC---CcceEEEEEec-C-CCHHHHHHHHHHHHHHHHh
Confidence 56788888888742332 22458999984 3 4778999999999988664
No 50
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.91 E-value=3.1e-22 Score=203.57 Aligned_cols=337 Identities=11% Similarity=0.069 Sum_probs=220.4
Q ss_pred cCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHH
Q 048643 98 YFPSSGSIAGFLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAAR 177 (506)
Q Consensus 98 ~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar 177 (506)
|.|++..++..+.+.+...++. | ++....+...+.+.+++++|.++.. ...++++|||+++..++....
T Consensus 3 ~~p~p~~~~~~~~~~~~~~~~~----~--~~~~~~~~~~~~~~la~~~~~~~~~-----~~i~~~~~gt~~l~~~~~~~~ 71 (355)
T TIGR03301 3 LTPGPLSTSATVRDAMLVDWCH----W--DSEFNDVTDQVRDRLLALAGGDDNH-----TCVLLQGSGTFAVEATIGSLV 71 (355)
T ss_pred CcCCCCCCCHHHHHHhhhhccC----C--CHHHHHHHHHHHHHHHHHhcCCCCC-----cEEEEeCCcHHHHHHHHHhcc
Confidence 3466666666666666553332 2 2334567778899999999998642 146689999999887776543
Q ss_pred HHHHHhhcccCCCCeEEEeCCCCchH-HHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEe
Q 048643 178 DRVLNKIGRENISKLVVYGSDQTHCA-LQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCAT 256 (506)
Q Consensus 178 ~~~~~~~~~~~~~~~~v~~s~~~H~s-~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t 256 (506)
.. ++.+++++...+.+ +..+++..|+ +++.++.++ ++.+|+++|++++++.+ ...+|+.+
T Consensus 72 ~~----------~~~vi~~~~~~~~~~~~~~a~~~g~---~~~~i~~~~--~~~~d~~~l~~~l~~~~----~~~~v~~~ 132 (355)
T TIGR03301 72 PR----------DGKLLVLINGAYGERLAKICEYLGI---PHTDLNFSE--YEPPDLNRIEEALAADP----DITHVATV 132 (355)
T ss_pred CC----------CCeEEEECCCchhhHHHHHHHHcCC---ceEEEecCC--CCCCCHHHHHHHHHhCC----CceEEEEE
Confidence 21 33445555444443 5677888999 999999864 45899999999997632 24467788
Q ss_pred ccCCCCCcccChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhH
Q 048643 257 IGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSAL 336 (506)
Q Consensus 257 ~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l 336 (506)
+.+|++|.+.|+++|+++|++||++++||++++.+....+ +... ++|.+..++|||++.|.|+|+++++++. +
T Consensus 133 ~~~~~~G~~~~~~~i~~l~~~~~~~livD~~~s~g~~~~~-----~~~~-~~d~~~~s~~K~l~~~~G~g~~~~~~~~-~ 205 (355)
T TIGR03301 133 HHETTTGILNPLEAIAKVARSHGAVLIVDAMSSFGAIPID-----IEEL-DVDALIASANKCLEGVPGFGFVIARRDL-L 205 (355)
T ss_pred ecCCcccchhHHHHHHHHHHHcCCEEEEEeccccCCcccc-----hhhc-CccEEEecCCcccccCCceeEEEECHHH-H
Confidence 8999999999999999999999999999997754432221 1111 6899999999999988899999887643 2
Q ss_pred Hhhhc-CCccccCCccccCCCccCCCC--ccccCCCC-CCchHHHHHHHHhchhH-HHHHHHHHHHHHHHHHHHHHcCCC
Q 048643 337 VSSLS-TNPEYLKNKATESKQVVDYKD--WQITLSRR-FRSLKLWLVIRNYGVAN-LRHFLRSHVNMAKLFERLVASDKR 411 (506)
Q Consensus 337 ~~~~~-~~~~yl~~~~~~~~~~~~~~~--~~~~~sr~-~~al~~~~~l~~~G~~g-~~~~i~~~~~~a~~l~~~l~~~~~ 411 (506)
. .+. ...++..+... .+.+.. .....+.. .....+..+++.+..+| +.+..++..++++++.+.|++. +
T Consensus 206 ~-~~~~~~~~~~~~~~~----~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~-g 279 (355)
T TIGR03301 206 E-ASAGNARSLYLDLYD----QWAYMEKTGKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRAL-G 279 (355)
T ss_pred H-HhhCCCCCceeeHHH----HHHHhhhcCCCCCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHc-C
Confidence 2 222 11111111000 000000 00001111 11234456677776666 8889999999999999999887 6
Q ss_pred Cc---c-----c-eEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHH
Q 048643 412 VS---P-----S-AVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEER 482 (506)
Q Consensus 412 ~~---p-----~-~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~e 482 (506)
++ | + +++|++.+.. .....++.+++.++|++ +.+.......++|++++ ..++++
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~l~~~gi~-i~~~~~~~~~~iRis~~-~~~~~~ 342 (355)
T TIGR03301 280 FQPLLPERWQSPIIVSFLYPDDP---------------DFDFDDFYQELKERGFV-IYPGKLTLADTFRIGTI-GEIDAA 342 (355)
T ss_pred CeeecCCCCCCCcEEEEECCCCC---------------cchHHHHHHHHHHCCEE-EECCccccccEEEEecC-CCCCHH
Confidence 65 2 2 3566654310 01134677778788864 44443222368999985 456788
Q ss_pred HHHHHHHHHHHH
Q 048643 483 HVMVAWTMVQEQ 494 (506)
Q Consensus 483 di~~li~~l~~~ 494 (506)
|++++++.|+++
T Consensus 343 ~i~~~~~~l~~~ 354 (355)
T TIGR03301 343 DIERLLEAIKDA 354 (355)
T ss_pred HHHHHHHHHHhh
Confidence 999999999864
No 51
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.91 E-value=2.9e-22 Score=199.08 Aligned_cols=319 Identities=13% Similarity=0.093 Sum_probs=227.0
Q ss_pred ccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCc--h
Q 048643 125 ISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTH--C 202 (506)
Q Consensus 125 ~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H--~ 202 (506)
..+|.+..+-+++.+.+..+++.+... .-+++++||.+...++..... ++..|++....- .
T Consensus 31 h~s~~F~~~~~~~~~~L~~v~~t~~~~------~~ll~gsGt~amEAav~sl~~-----------pgdkVLv~~nG~FG~ 93 (383)
T COG0075 31 HRSPDFVGIMKEVLEKLRKVFGTENGD------VVLLSGSGTLAMEAAVASLVE-----------PGDKVLVVVNGKFGE 93 (383)
T ss_pred CCCHHHHHHHHHHHHHHHHHhcCCCCc------EEEEcCCcHHHHHHHHHhccC-----------CCCeEEEEeCChHHH
Confidence 357889999999999999999988533 568888888777666554443 333343333333 3
Q ss_pred HHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEE
Q 048643 203 ALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWV 282 (506)
Q Consensus 203 s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~l 282 (506)
.+.+.++.+|. +++.+..++.. .+|+++++++|+++.. .-.|.++++.|+||..+|+++|+++|++||..+
T Consensus 94 R~~~ia~~~g~---~v~~~~~~wg~--~v~p~~v~~~L~~~~~----~~~V~~vH~ETSTGvlnpl~~I~~~~k~~g~l~ 164 (383)
T COG0075 94 RFAEIAERYGA---EVVVLEVEWGE--AVDPEEVEEALDKDPD----IKAVAVVHNETSTGVLNPLKEIAKAAKEHGALL 164 (383)
T ss_pred HHHHHHHHhCC---ceEEEeCCCCC--CCCHHHHHHHHhcCCC----ccEEEEEeccCcccccCcHHHHHHHHHHcCCEE
Confidence 68899999999 99999998754 8999999999995432 337999999999999999999999999999999
Q ss_pred Eeecccc--cccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCcc--ccCCccccC-CCc
Q 048643 283 HVDAAYA--GSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPE--YLKNKATES-KQV 357 (506)
Q Consensus 283 hVDaA~g--g~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~--yl~~~~~~~-~~~ 357 (506)
+||+.-+ |--+-.+++ ++|.+...++|+|++|.|.|++.++++..- .......+ |+.-..... ...
T Consensus 165 iVDaVsS~Gg~~~~vd~w--------giDv~itgSQK~l~~PPGla~v~~S~~a~e-~~~~~~~~~~ylDL~~~~~~~~~ 235 (383)
T COG0075 165 IVDAVSSLGGEPLKVDEW--------GIDVAITGSQKALGAPPGLAFVAVSERALE-AIEERKHPSFYLDLKKWLKYMEK 235 (383)
T ss_pred EEEecccCCCcccchhhc--------CccEEEecCchhccCCCccceeEECHHHHH-HHhcCCCCceeecHHHHHHHHhh
Confidence 9998544 333333433 899999999999999999999999887652 22222222 332111000 000
Q ss_pred cCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc----c-----ceEEEeecCCCccc
Q 048643 358 VDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS----P-----SAVMDKLKPKYENC 428 (506)
Q Consensus 358 ~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~----p-----~~v~f~~~~~~~~~ 428 (506)
.....+|...+ ..+++..+|+.+-.+|++++++|+..+++++++.++++ ||+ + .+++|+.... .
T Consensus 236 ~~~~p~Tppv~---~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~al-Gl~~~~~~~~~s~tvta~~~P~g-~-- 308 (383)
T COG0075 236 KGSTPYTPPVN---LIYALREALDLILEEGLEARIARHRRLAEALRAGLEAL-GLELFADPERRSPTVTAIKVPEG-V-- 308 (383)
T ss_pred cCCCCCCCCHH---HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCccccCcccCCCceEEEECCCC-C--
Confidence 01111111111 22567788888889999999999999999999999998 777 2 5555655332 1
Q ss_pred ccccccchHHHHHHHHHHHHHHHHhcCcEEEeeee-ECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHc
Q 048643 429 HSQQLVTEEEAINEFNRELLESINASGKAYMTHAV-CGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAFLT 500 (506)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l~~ 500 (506)
+ ..+++..+.+++.+.+++.. .....++|+..|. ..+.+|+..++.+|+.+.+++..
T Consensus 309 ------------~--~~~~~~~~~~~~g~~i~gg~~~l~gkifRIGhMG-~~~~~dv~~~l~ale~~L~~~g~ 366 (383)
T COG0075 309 ------------D--DKKVRRALLKEYGVEIAGGQGPLKGKIFRIGHMG-NVRPEDVLAALAALEAALRELGV 366 (383)
T ss_pred ------------C--cHHHHHHHHHhCCEEecccccccCccEEEEecCc-cCCHHHHHHHHHHHHHHHHHcCC
Confidence 1 12233345555444555543 2334689999998 78888999999999999887643
No 52
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.90 E-value=1.3e-21 Score=200.25 Aligned_cols=343 Identities=12% Similarity=0.068 Sum_probs=222.6
Q ss_pred cCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHH
Q 048643 98 YFPSSGSIAGFLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAAR 177 (506)
Q Consensus 98 ~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar 177 (506)
|.|++......+.+.+...+ ..| ++.......++.+.+++++|.+++. ...+++++||+++..++....
T Consensus 9 ~~pgP~~~~~~~~~a~~~~~----~~~--~~~~~~~~~~~~~~l~~l~~~~~~~-----~~i~~~~~gt~~l~~~~~~l~ 77 (368)
T PRK13479 9 LTPGPLTTSRTVREAMLRDW----GSW--DDDFNALTASVRAKLVAIATGEEGY-----TCVPLQGSGTFSVEAAIGSLV 77 (368)
T ss_pred ecCCCCCCCHHHHHHhCCCC----CCC--ChHHHHHHHHHHHHHHHHhCCCCCc-----eEEEEcCCcHHHHHHHHHhcc
Confidence 45666555555545444333 222 3445567788899999999986531 146789999999887766653
Q ss_pred HHHHHhhcccCCCCeEEEeCCCCchHH--HHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEE
Q 048643 178 DRVLNKIGRENISKLVVYGSDQTHCAL--QKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCA 255 (506)
Q Consensus 178 ~~~~~~~~~~~~~~~~v~~s~~~H~s~--~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~ 255 (506)
. ++..+++....++.. .+.++..|+ +++.||.++ ++.+|+++|++++++..+ +.+|++
T Consensus 78 ~-----------~~~~vlv~~~~~~~~~~~~~~~~~g~---~~~~i~~~~--~~~~d~~~l~~~l~~~~~----~~~v~~ 137 (368)
T PRK13479 78 P-----------RDGKVLVPDNGAYGARIAQIAEYLGI---AHVVLDTGE--DEPPDAAEVEAALAADPR----ITHVAL 137 (368)
T ss_pred C-----------CCCeEEEEeCCchHHHHHHHHHHcCC---cEEEEECCC--CCCCCHHHHHHHHHhCCC----CcEEEE
Confidence 2 333344444555543 578888999 999999875 358999999999875321 336788
Q ss_pred eccCCCCCcccChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchh
Q 048643 256 TIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSA 335 (506)
Q Consensus 256 t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~ 335 (506)
++++|++|.+.|+++|+++|+++|++++||++++.+....+ +... ++|.++.++|||++.|.|+|+++++.+.
T Consensus 138 ~~~~~~tG~~~~~~~i~~l~~~~~~~livDa~~~~g~~~~~-----~~~~-~~d~~v~s~~K~l~g~~G~G~l~~~~~~- 210 (368)
T PRK13479 138 VHCETTTGILNPLDEIAAVAKRHGKRLIVDAMSSFGAIPID-----IAEL-GIDALISSANKCIEGVPGFGFVIARRSE- 210 (368)
T ss_pred EcccCccccccCHHHHHHHHHHcCCEEEEEcccccCCcccc-----cccc-CceEEEecCccccccCCCceEEEECHHH-
Confidence 99999999999999999999999999999987754432221 1111 6899999999999999999999997543
Q ss_pred HHhhhcCCccccCCccccCCCccCCCCccccCCCC-CCchHHHHHHHHhchh-HHHHHHHHHHHHHHHHHHHHHcCCCCc
Q 048643 336 LVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRR-FRSLKLWLVIRNYGVA-NLRHFLRSHVNMAKLFERLVASDKRVS 413 (506)
Q Consensus 336 l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~l~~~G~~-g~~~~i~~~~~~a~~l~~~l~~~~~~~ 413 (506)
+........+|..+.............+. .+.. .....+..++..+..+ ++++.+++..++++++.+.|++. +++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 287 (368)
T PRK13479 211 LEACKGNSRSLSLDLYDQWAYMEKTGQWR--FTPPTHVVAAFYQALLELEEEGGVPARGARYANNQRTLVAGMRAL-GFE 287 (368)
T ss_pred HHHhhcCCCCeeecHHHHHhhhcccCCCC--CCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc-CCc
Confidence 22211111122111000000000000000 0111 1224556677766444 47888899999999999999987 666
Q ss_pred ---c------ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHH
Q 048643 414 ---P------SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHV 484 (506)
Q Consensus 414 ---p------~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi 484 (506)
+ .+++|.+.... .....++.++|.++|++ +.+.......++|++++. .++++|+
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~l~~~L~~~gi~-v~~g~~~~~~~iRis~~~-~~t~edi 350 (368)
T PRK13479 288 PLLDAEIQSPIIVTFHAPADP---------------AYDFKEFYERLKEQGFV-IYPGKLTQVDTFRIGCIG-DVDAADI 350 (368)
T ss_pred ccCCchhcCceEEEEECCCCC---------------CcCHHHHHHHHHHCCEE-EecCCCCCCCEEEEecCC-CCCHHHH
Confidence 1 25777654320 00135677888888875 443332224579998754 4678899
Q ss_pred HHHHHHHHHHHHHH
Q 048643 485 MVAWTMVQEQLEAF 498 (506)
Q Consensus 485 ~~li~~l~~~~~~l 498 (506)
++++++|+++.+++
T Consensus 351 ~~~l~~L~~~l~~~ 364 (368)
T PRK13479 351 RRLVAAIAEALYWM 364 (368)
T ss_pred HHHHHHHHHHHHHc
Confidence 99999999987765
No 53
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.90 E-value=9.7e-22 Score=199.93 Aligned_cols=251 Identities=12% Similarity=0.081 Sum_probs=180.2
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHH
Q 048643 127 SPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQK 206 (506)
Q Consensus 127 ~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~k 206 (506)
+.....+..++.+++++++|.+.+ ..++++|+|+++..++.+....... .++..|+++...|+|+..
T Consensus 37 ~~~~~~~~~~~r~~la~~~g~~~~-------~v~~~~g~t~a~~~~l~~l~~~~~~------~g~~~vi~~~~~~~s~~~ 103 (353)
T TIGR03235 37 GHNAKKAVERARKQVAEALGADTE-------EVIFTSGATESNNLAILGLARAGEQ------KGKKHIITSAIEHPAVLE 103 (353)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCC-------eEEEeCCHHHHHHHHHHHHHHhccc------CCCCeeeEcccccHHHHH
Confidence 334556677899999999999765 6899999999988777665432100 023678889999998766
Q ss_pred HHH---HhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEE
Q 048643 207 AAQ---IVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVH 283 (506)
Q Consensus 207 a~~---~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lh 283 (506)
... ..|+ +++.||+++ ++.+|+++|++++++. +.+|++++++|++|.+.|+++|+++|+++|+|+|
T Consensus 104 ~~~~~~~~G~---~v~~v~~~~--~~~~d~~~l~~~l~~~------~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~~i 172 (353)
T TIGR03235 104 PIRALERNGF---TVTYLPVDE--SGRIDVDELADAIRPD------TLLVSIMHVNNETGSIQPIREIAEVLEAHEAFFH 172 (353)
T ss_pred HHHHHHhcCC---EEEEEccCC--CCcCCHHHHHHhCCCC------CEEEEEEcccCCceeccCHHHHHHHHHHcCCEEE
Confidence 543 4577 999999875 4689999999988643 4588899999999999999999999999999999
Q ss_pred eecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCc
Q 048643 284 VDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDW 363 (506)
Q Consensus 284 VDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~ 363 (506)
||++++.+....+-.. .++|++++++|||+ .|.|+|+++++++.... ....+.+.... . . .
T Consensus 173 vD~a~~~g~~~~~~~~------~~~D~~~~s~~K~~-gp~g~g~l~~~~~~~~~--~~~~~~~~~~~-~--------~-~ 233 (353)
T TIGR03235 173 VDAAQVVGKITVDLSA------DRIDLISCSGHKIY-GPKGIGALVIRKRGKPK--APLKPIMFGGG-Q--------E-R 233 (353)
T ss_pred EEchhhcCCccccccc------cCCCEEEeehhhcC-CCCceEEEEEccCcccc--cccCceeeCCC-C--------c-C
Confidence 9999987766544211 27999999999995 69999999998763211 11122122110 0 0 0
Q ss_pred ccc-CCCCC-CchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc----c-----ceEEEeec
Q 048643 364 QIT-LSRRF-RSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS----P-----SAVMDKLK 422 (506)
Q Consensus 364 ~~~-~sr~~-~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~----p-----~~v~f~~~ 422 (506)
.++ ++... ..+.+..+++.+ .++.+++.+++.++++++++.|++ ++++ | .+++|.+.
T Consensus 234 ~~~~gt~~~~~~~al~~al~~~-~~~~~~~~~~~~~l~~~l~~~l~~-~g~~~~~~~~~~~~~i~~~~~~ 301 (353)
T TIGR03235 234 GLRPGTLPVHLIVGMGEAAEIA-RRNAQAWEVKLRAMRNQLRDALQT-LGVKLNGDPAETIPHILNFSID 301 (353)
T ss_pred ccccCCCChHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHhcc-CCeEEeCCcccccCCEEEEEeC
Confidence 111 12221 224455555554 357888899999999999999988 6776 1 57888764
No 54
>PRK07179 hypothetical protein; Provisional
Probab=99.89 E-value=9.3e-21 Score=196.38 Aligned_cols=327 Identities=12% Similarity=0.063 Sum_probs=210.2
Q ss_pred CCCCCCccccCCCCCCHHHHHHHHHHhhcCCC-Ccc-c-ccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCc
Q 048643 89 HWQSPNYFAYFPSSGSIAGFLGEMLSSGFNVV-GFN-W-ISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTT 165 (506)
Q Consensus 89 ~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~-~~~-~-~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~gg 165 (506)
.+.+-.|+|+.. .+.....+.+.+..+.+.. ... + ...+...++| +.+++++|.+ ..++++||
T Consensus 58 ~~~~~~YL~l~~-~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le----~~la~~~g~~---------~~~~~~sG 123 (407)
T PRK07179 58 ILQSNDYLNLSG-HPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFE----KKLAAFTGFE---------SCLLCQSG 123 (407)
T ss_pred EeecCCccCCCC-CHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHH----HHHHHHhCCC---------cEEEECCH
Confidence 345566777752 2333333444443332211 111 1 1223455555 4677777875 34889999
Q ss_pred hHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHh
Q 048643 166 CEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVE 245 (506)
Q Consensus 166 t~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~ 245 (506)
++||..++.+... ++..|+++...|.++...++..|. +++.++ ..|+++|++++++.
T Consensus 124 ~~An~~~l~~l~~-----------~g~~v~~~~~~h~s~~~~~~~~g~---~~~~~~-------~~d~~~l~~~l~~~-- 180 (407)
T PRK07179 124 WAANVGLLQTIAD-----------PNTPVYIDFFAHMSLWEGVRAAGA---QAHPFR-------HNDVDHLRRQIERH-- 180 (407)
T ss_pred HHHHHHHHHHhCC-----------CCCEEEEECCcCHHHHHHHHHCCC---eEEEec-------CCCHHHHHHHHHhc--
Confidence 9999888776543 445788899999999999988888 665443 45999999998652
Q ss_pred cCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecccccccccCccchhhh--cCC-CCCCeeEEcCccccCCC
Q 048643 246 AGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFI--DGV-EGADSFSLNAHKWFFTT 322 (506)
Q Consensus 246 ~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~--~gi-~~aDsi~~~~hK~l~~p 322 (506)
.+.+|++...++++|.+.|+++|+++|++||+++|+|++|+.+..- +..+..+ .++ ..+|.++.++||+++.+
T Consensus 181 ---~~~lV~v~~v~n~tG~i~pl~~I~~l~~~~~~~livDea~~~g~~g-~~g~g~~~~~~~~~~vdi~~~S~sK~~g~~ 256 (407)
T PRK07179 181 ---GPGIIVVDSVYSTTGTIAPLADIVDIAEEFGCVLVVDESHSLGTHG-PQGAGLVAELGLTSRVHFITASLAKAFAGR 256 (407)
T ss_pred ---CCeEEEECCCCCCCCccccHHHHHHHHHHcCCEEEEECcccccCcC-CCCCchHHhcCCCCCCCEEEeechHhhhcc
Confidence 1447788889999999999999999999999999999999754321 1111111 122 35799999999999753
Q ss_pred CcceEEEEeCchhHHhhhcC-CccccCCccccCCCccCCCCccccCCCC-CCchHHHHHHHHhchhHHHHHHHHHHHHHH
Q 048643 323 LDCCCLWVKDPSALVSSLST-NPEYLKNKATESKQVVDYKDWQITLSRR-FRSLKLWLVIRNYGVANLRHFLRSHVNMAK 400 (506)
Q Consensus 323 ~~~g~~~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~l~~~G~~g~~~~i~~~~~~a~ 400 (506)
+|++++++. . ...+.. ..++... ++-. .....+..+++.+. ...++.++..++++
T Consensus 257 --~G~l~~~~~-~-~~~~~~~~~~~~~~-----------------~t~~~~~~aa~~aal~~~~--~~~~~~~~l~~~~~ 313 (407)
T PRK07179 257 --AGIITCPRE-L-AEYVPFVSYPAIFS-----------------STLLPHEIAGLEATLEVIE--SADDRRARLHANAR 313 (407)
T ss_pred --CeEEEeCHH-H-HHHHHHhCcCeeeC-----------------CCCCHHHHHHHHHHHHHHh--cCHHHHHHHHHHHH
Confidence 788877542 2 222211 1111110 1111 11122334455442 22456788899999
Q ss_pred HHHHHHHcCCCCc---c-ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcE---EEeeeeECCEEEEEEE
Q 048643 401 LFERLVASDKRVS---P-SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKA---YMTHAVCGGIYAMRFA 473 (506)
Q Consensus 401 ~l~~~l~~~~~~~---p-~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~---~~~~~~~~g~~~lR~~ 473 (506)
+|.+.|+++ +++ + +++.+.+... .....+.+.|.++|+. +..+....+..++|++
T Consensus 314 ~l~~~L~~~-g~~v~~~~~i~~l~~~~~-----------------~~~~~~~~~L~~~GI~~~~~~~p~~~~~~~~lRis 375 (407)
T PRK07179 314 FLREGLSEL-GYNIRSESQIIALETGSE-----------------RNTEVLRDALEERNVFGAVFCAPATPKNRNLIRLS 375 (407)
T ss_pred HHHHHHHHc-CCCCCCCCCEEEEEeCCH-----------------HHHHHHHHHHHHCCceEeeecCCCCCCCCceEEEE
Confidence 999999987 776 3 7777765321 1235667777788874 2223333346799999
Q ss_pred ecCCCCCHHHHHHHHHHHHHHHHHH
Q 048643 474 VGATLTEERHVMVAWTMVQEQLEAF 498 (506)
Q Consensus 474 ~~~~~tt~edi~~li~~l~~~~~~l 498 (506)
++ ..+|++||++++++|+++.++.
T Consensus 376 ~~-~~~t~edi~~~~~~l~~~~~~~ 399 (407)
T PRK07179 376 LN-ADLTASDLDRVLEVCREARDEV 399 (407)
T ss_pred EC-CCCCHHHHHHHHHHHHHHHHhh
Confidence 95 5678889999999999887654
No 55
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.89 E-value=2.6e-21 Score=195.51 Aligned_cols=290 Identities=16% Similarity=0.078 Sum_probs=190.0
Q ss_pred HHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHH---HHHH
Q 048643 134 ENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQK---AAQI 210 (506)
Q Consensus 134 E~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~k---a~~~ 210 (506)
..++.+++++++| +. ..++++|||+++..++.+... ++..|+++...|+++.+ .+++
T Consensus 34 ~~~l~~~~a~~~g-~~--------~~~~~~~gt~a~~~~~~~l~~-----------~gd~v~~~~~~~~~~~~~~~~~~~ 93 (338)
T cd06502 34 TAKLEARAAELFG-KE--------AALFVPSGTAANQLALAAHTQ-----------PGGSVICHETAHIYTDEAGAPEFL 93 (338)
T ss_pred HHHHHHHHHHHhC-CC--------eEEEecCchHHHHHHHHHhcC-----------CCCeEEEecCcceeeecCCcHHHH
Confidence 4445578889888 32 678999999998877766532 55678889999988765 3456
Q ss_pred hCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhc-CCccEEEEEeccCCCCC--cccChhHHHHHHHHhCCEEEeecc
Q 048643 211 VGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEA-GLVPLFLCATIGTTAIT--AVDPLKPLCDVAKQFGIWVHVDAA 287 (506)
Q Consensus 211 ~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~-g~~p~~Vv~t~gtt~tG--~idpl~~I~~ia~~~g~~lhVDaA 287 (506)
.|+ +++.+|.+ ++.+|+++|++++++..+. ...+.+|+++.++++.| ..+++++|+++|++||+++|||+|
T Consensus 94 ~g~---~~~~v~~~---~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~g~~~~~~~l~~i~~~~~~~~~~livDea 167 (338)
T cd06502 94 SGV---KLLPVPGE---NGKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEGGTVYPLDELKAISALAKENGLPLHLDGA 167 (338)
T ss_pred cCc---eEEeecCC---CCcCCHHHHHHHhhccCCCcCCcceEEEEEeecCCccccCHHHHHHHHHHHHHcCCeEeechH
Confidence 788 89999875 3589999999999753211 12355778887777533 347789999999999999999999
Q ss_pred cccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCccccC
Q 048643 288 YAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITL 367 (506)
Q Consensus 288 ~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~ 367 (506)
|..+....... ........+|+++.++|||++.|. |.+++.+++... .+....... ..
T Consensus 168 ~~~~~~~~~~~-~~~~~~~~~d~~~~s~sK~~~~~~--g~~~~~~~~~~~-~~~~~~~~~------------------~~ 225 (338)
T cd06502 168 RLANAAAALGV-ALKTYKSGVDSVSFCLSKGGGAPV--GAVVVGNRDFIA-RARRRRKQA------------------GG 225 (338)
T ss_pred HHHHHHHhcCC-CHHHHHhcCCEEEEeccccCCCcc--ceEEECCHHHHH-HHHHHHHHh------------------CC
Confidence 85432211111 111111378999999999999885 335545544332 221100000 00
Q ss_pred CCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc--c---ceEEEeecCCCcccccccccchHHHHHH
Q 048643 368 SRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS--P---SAVMDKLKPKYENCHSQQLVTEEEAINE 442 (506)
Q Consensus 368 sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~--p---~~v~f~~~~~~~~~~~~~~~~~~~~~~~ 442 (506)
+.+..++..+.++..+...++.+.+++..++++++.+.|++. ++. | ++++++.... ..
T Consensus 226 ~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~v~~~~~----------------~~ 288 (338)
T cd06502 226 GMRQSGFLAAAGLAALENDLWLRRLRHDHEMARRLAEALEEL-GGLESEVQTNIVLLDPVEA----------------NA 288 (338)
T ss_pred ChhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CCCcccccCCeEEEecCCc----------------cH
Confidence 111123444555566655567788899999999999999987 444 2 7888876432 12
Q ss_pred HHHHHHHHHH---hcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHH
Q 048643 443 FNRELLESIN---ASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQE 493 (506)
Q Consensus 443 ~~~~l~~~l~---~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~ 493 (506)
...++.+.+. +.|.. +.+. .. .++|+++ +..++++|++++++++++
T Consensus 289 ~~~~l~~~l~~~~~~gi~-~~~~--~~-~~lRi~~-~~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 289 VFVELSKEAIERRGEGVL-FYAW--GE-GGVRFVT-HWDTTEEDVDELLSALKA 337 (338)
T ss_pred HHHHHHHHHHHhhhCCEE-EEec--CC-CeEEEEe-ecCCCHHHHHHHHHHHhc
Confidence 2334444443 56754 3332 22 6899999 567788899999998864
No 56
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.89 E-value=1.5e-20 Score=188.60 Aligned_cols=334 Identities=15% Similarity=0.111 Sum_probs=229.1
Q ss_pred CCCCCCCCCCccccCCCCCCHHHHHHHHHHhh-cCCCC--cccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEE
Q 048643 85 PGVTHWQSPNYFAYFPSSGSIAGFLGEMLSSG-FNVVG--FNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVI 161 (506)
Q Consensus 85 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~-~n~~~--~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~ 161 (506)
+...+|.+..|+|+-..+. ......+.+..+ ....+ ......+...+||++ ||+++|.+. .++
T Consensus 39 ~~~~nf~SNdYLGLa~~~~-~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~----lA~f~g~e~---------al~ 104 (388)
T COG0156 39 RKVLNFCSNDYLGLASHPE-LIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEE----LADFLGAEA---------ALL 104 (388)
T ss_pred ceeEeeeccCcccccCCHH-HHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHH----HHHHhCCCc---------EEE
Confidence 4456778888999853322 222222233321 11111 123445566667765 677777764 467
Q ss_pred cCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHH
Q 048643 162 QGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQIN 241 (506)
Q Consensus 162 t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~ 241 (506)
.++|-.||+..+.+... ++++|+..+..|.|+..++++.+. +++..+ +.|+++||+.++
T Consensus 105 f~SGy~AN~~~i~~l~~-----------~~dli~~D~lnHASiidG~rls~a---~~~~f~-------HnD~~~Le~~l~ 163 (388)
T COG0156 105 FSSGFVANLGLLSALLK-----------KGDLIFSDELNHASIIDGIRLSRA---EVRRFK-------HNDLDHLEALLE 163 (388)
T ss_pred EcccchhHHHHHHHhcC-----------CCcEEEEechhhhhHHHHHHhCCC---cEEEec-------CCCHHHHHHHHH
Confidence 77788899877766544 678899999999999999999888 888876 468999999999
Q ss_pred HHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecccccccccCccchhhhc--CC--CCCCeeEEcCcc
Q 048643 242 LDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFID--GV--EGADSFSLNAHK 317 (506)
Q Consensus 242 ~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~--gi--~~aDsi~~~~hK 317 (506)
+...++..+.+||.....++.|.+.||++|+++|++|++|+.||.||+.+++- +..+.... |+ ...|.+..+..|
T Consensus 164 ~~~~~~~~~~~IvtegVfSMdGdiApL~~l~~L~~ky~a~L~VDEAHa~Gv~G-~~GrG~~e~~g~~~~~vdi~~gTlsK 242 (388)
T COG0156 164 EARENGARRKLIVTEGVFSMDGDIAPLPELVELAEKYGALLYVDEAHAVGVLG-PNGRGLAEHFGLEPEEVDIIVGTLGK 242 (388)
T ss_pred hhhccCCCceEEEEeccccCCCCcCCHHHHHHHHHHhCcEEEEEccccccccC-CCCccHHHHhCCCCccceEEEEEchh
Confidence 86544335678888888999999999999999999999999999999877653 22233221 33 245899999999
Q ss_pred ccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHH
Q 048643 318 WFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVN 397 (506)
Q Consensus 318 ~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~ 397 (506)
.|+. .|.++.-+............+|++.... .+..+.++-.+++.+- ...++.++..+
T Consensus 243 AlGs---~Gg~v~g~~~~~d~L~~~ar~~ifStal----------------pP~~aaa~~~al~~l~--~~~~~r~~L~~ 301 (388)
T COG0156 243 ALGS---SGGYIAGSAALIDYLRNRARPFIFSTAL----------------PPAVAAAALAALRILE--EGPERRERLQE 301 (388)
T ss_pred hhcc---cCceeeCcHHHHHHHHHhCCceeccCCC----------------CHHHHHHHHHHHHHHH--hCHHHHHHHHH
Confidence 9983 4555555544332222445667764311 1123334455566542 34567788888
Q ss_pred HHHHHHHHHHcCCCCc--c---ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcE---EEeeeeECCEEE
Q 048643 398 MAKLFERLVASDKRVS--P---SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKA---YMTHAVCGGIYA 469 (506)
Q Consensus 398 ~a~~l~~~l~~~~~~~--p---~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~---~~~~~~~~g~~~ 469 (506)
++.+++..++.. ++. | +++.+.+.+. ....++.+.|.++|+. +..||+..|...
T Consensus 302 ~~~~~~~~~~~~-~~~~~~s~s~I~pv~~gd~-----------------~~a~~~s~~l~~~Gi~v~~i~~PTVp~gtar 363 (388)
T COG0156 302 LAAFFRSLLKAL-GLVLLPSESPIIPVILGDE-----------------ERALEASRALLEEGIYVSAIRPPTVPKGTAR 363 (388)
T ss_pred HHHHHHHHHHhc-CCccCCCCCCeeeeEeCCH-----------------HHHHHHHHHHHHCCeeEeeecCCCCCCCcce
Confidence 999998776665 554 3 7887777553 3456777778778763 345677788999
Q ss_pred EEEEecCCCCCHHHHHHHHHHHHHH
Q 048643 470 MRFAVGATLTEERHVMVAWTMVQEQ 494 (506)
Q Consensus 470 lR~~~~~~~tt~edi~~li~~l~~~ 494 (506)
||++++. ..|++||+++++++.++
T Consensus 364 lRi~lta-~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 364 LRITLTA-AHTEEDIDRLAEALSEV 387 (388)
T ss_pred EEEEecC-CCCHHHHHHHHHHHHhh
Confidence 9999964 45777999999999875
No 57
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.89 E-value=3.5e-21 Score=201.64 Aligned_cols=301 Identities=11% Similarity=0.062 Sum_probs=198.7
Q ss_pred hhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEc---CCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHH
Q 048643 128 PAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQ---GTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCAL 204 (506)
Q Consensus 128 p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t---~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~ 204 (506)
.....+|..+++.++++||.+.+ ..+++ +||+++|+.++.+... ++..|+++...|.++
T Consensus 76 ~~~~~iE~~ar~~~a~lf~a~~~-------~~~~~~~~~sgt~an~~v~~al~~-----------~gd~Ii~~~~ehg~~ 137 (452)
T PTZ00094 76 EVVDKIENLCQKRALEAFGLDPE-------EWGVNVQPYSGSPANFAVYTALLQ-----------PHDRIMGLDLPSGGH 137 (452)
T ss_pred hHHHHHHHHHHHHHHHHhCCCcc-------cceeecCCCchHHHHHHHHHHhcC-----------CCCEEEecccccCCc
Confidence 35678887788999999998754 22344 7889999887776532 556788888888766
Q ss_pred HHHHHHh--------CCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHH
Q 048643 205 QKAAQIV--------GIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAK 276 (506)
Q Consensus 205 ~ka~~~~--------G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~ 276 (506)
...+..+ |.+ -++..++++. +|.+|+++|++++++.+ |.+|+++ .+.+|.+.|+++|+++|+
T Consensus 138 l~~~~~l~~~~~~~~~~~-~~~~~~~~~~--~g~id~~~L~~~l~~~~-----~~lvi~~--~s~~g~~~di~~I~~i~~ 207 (452)
T PTZ00094 138 LTHGFYTAKKKVSATSIY-FESLPYQVNE--KGLIDYDKLEELAKAFR-----PKLIIAG--ASAYPRDIDYKRFREICD 207 (452)
T ss_pred ccccccccccccccceee-eeeeecccCC--CCCcCHHHHHHHHHHhC-----CCEEEEe--CCCCCCccCHHHHHHHHH
Confidence 5433211 110 0344555654 47999999999997532 3345443 456999999999999999
Q ss_pred HhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCC-ccccCCccccCC
Q 048643 277 QFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTN-PEYLKNKATESK 355 (506)
Q Consensus 277 ~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~-~~yl~~~~~~~~ 355 (506)
++|+++|||+||+.+.+..+.... .+.++|.+++++||||+.|.| |++++++.. .. .+... ...+..
T Consensus 208 ~~ga~l~vDaaq~~G~i~~~~~~~---~~~~~D~l~~S~hK~l~GP~G-g~l~~~~~~-~~-~l~~~~~~~~~p------ 275 (452)
T PTZ00094 208 SVGAYLMADIAHTSGLVAAGVLPS---PFPYADVVTTTTHKSLRGPRS-GLIFYRKKV-KP-DIENKINEAVFP------ 275 (452)
T ss_pred HcCCEEEEeccchhccccCCCCCC---CCCCCcEEEcCCccCCCCCCc-eEEEEeccc-ch-HHHHhhccccCC------
Confidence 999999999999988876543221 123799999999999999997 888886542 11 11100 001100
Q ss_pred CccCCCCccccCCCC-CCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c------ceEEEeecCCC
Q 048643 356 QVVDYKDWQITLSRR-FRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS---P------SAVMDKLKPKY 425 (506)
Q Consensus 356 ~~~~~~~~~~~~sr~-~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p------~~v~f~~~~~~ 425 (506)
.++++-. .....+..+++.+...+++++.++..+++++|.+.|.+. +++ + .+|.|...+.
T Consensus 276 --------~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~~-g~~v~~~~~~~~~~~v~~~~~~~- 345 (452)
T PTZ00094 276 --------GLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAALEKR-GYDLVTGGTDNHLVLVDLRPFGI- 345 (452)
T ss_pred --------CCCCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhC-CcEEecCCCCCceEeecCCcCCC-
Confidence 0111211 233556667777766678888899999999999999875 665 1 2333433221
Q ss_pred cccccccccchHHHHHHHHHHHHHHHHhcCcEEEee-eeEC-----CEEEEEEEecCCCCC----HHHHHHHHHHHHHHH
Q 048643 426 ENCHSQQLVTEEEAINEFNRELLESINASGKAYMTH-AVCG-----GIYAMRFAVGATLTE----ERHVMVAWTMVQEQL 495 (506)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~-~~~~-----g~~~lR~~~~~~~tt----~edi~~li~~l~~~~ 495 (506)
..+.+...|.+.|+. ++. +... ....+|+++. ..|+ ++||+++++.|.++.
T Consensus 346 -----------------~~~~~~~~L~~~gI~-vs~~~~p~~~~~~~~~~vRis~~-~~tt~g~~~~di~~l~~~l~~~~ 406 (452)
T PTZ00094 346 -----------------TGSKMEKLLDAVNIS-VNKNTIPGDKSALNPSGVRLGTP-ALTTRGAKEKDFKFVADFLDRAV 406 (452)
T ss_pred -----------------CHHHHHHHHHHCCcE-EecccCCCCCcCCCCCeEEECCH-HHHhCCCCHHHHHHHHHHHHHHH
Confidence 124555566556764 432 2111 1368999984 4555 899999999999987
Q ss_pred HH
Q 048643 496 EA 497 (506)
Q Consensus 496 ~~ 497 (506)
+.
T Consensus 407 ~~ 408 (452)
T PTZ00094 407 KL 408 (452)
T ss_pred HH
Confidence 64
No 58
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.88 E-value=6.8e-21 Score=195.10 Aligned_cols=341 Identities=10% Similarity=-0.014 Sum_probs=215.2
Q ss_pred CCCccccCCCCCCHHHH-HHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEc-CCchHHH
Q 048643 92 SPNYFAYFPSSGSIAGF-LGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQ-GTTCEAI 169 (506)
Q Consensus 92 ~p~~~~~~~~~~~~~~~-~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t-~ggt~a~ 169 (506)
.|.-+.|.|++...+.. +-+.+...+- .....++.+.++-+++++.+++++|.++.. ..+++ ++||+++
T Consensus 10 ~~~~~~f~~Gp~~~~~~~v~~a~~~~~~---~~~hr~~~f~~~~~~~r~~l~~l~~~~~~~------~v~~~~gs~T~~~ 80 (378)
T PRK03080 10 RPADPRFSSGPCKKRPGWQLEALADALL---GRSHRQKPVKALLKRVIEGTRELLSLPEGY------EVGIVPGSDTGAW 80 (378)
T ss_pred CCCCCCcCCCCcCCChHHHHHHHHhhhc---ccCcCCHHHHHHHHHHHHHHHHHhCCCCCc------eEEEECCchHHHH
Confidence 34333455665554433 4444433221 111234677888899999999999997542 46655 5888877
Q ss_pred HHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHH--HHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcC
Q 048643 170 LCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQK--AAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAG 247 (506)
Q Consensus 170 l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~k--a~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g 247 (506)
-.++.... +. ++..++++ ..|.+-.. +++.+|+ .+++.++.+++ +..|+++++. ++
T Consensus 81 ~~~~~~l~----~~------~~~~vi~~-g~f~~~~~~~~~~~~g~--~~v~~~~~~~g--~~~d~~~i~~-----~~-- 138 (378)
T PRK03080 81 EMALWSLL----GA------RRVDHLAW-ESFGSKWATDVVKQLKL--EDPRVLEADYG--SLPDLSAVDF-----DR-- 138 (378)
T ss_pred HHHHHhcC----CC------CcceEEEe-CHHHHHHHHHHHhhcCC--CCceEeccCCC--CCCCHhhcCC-----CC--
Confidence 65554321 10 23444443 56665333 3345554 26788887653 4778776432 11
Q ss_pred CccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceE
Q 048643 248 LVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCC 327 (506)
Q Consensus 248 ~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~ 327 (506)
.|++++.+|.||.+.|+++|++ +++|++++||++++.+....+-. .+|.+..++||||+.|.|+|+
T Consensus 139 ----~V~~~h~~t~tG~~~pi~~I~~--~~~g~~~vVDa~qs~G~~pidv~--------~iD~~~~s~~K~l~~P~G~g~ 204 (378)
T PRK03080 139 ----DVVFTWNGTTTGVRVPVARWIG--ADREGLTICDATSAAFALPLDWS--------KLDVYTFSWQKVLGGEGGHGM 204 (378)
T ss_pred ----CEEEEecCCccceeccchhhcc--ccCCCeEEEecccccccCCCCHH--------HCcEEEEehhhhCCCCCceEE
Confidence 4889999999999999999999 88999999999998888776521 479999999999999999999
Q ss_pred EEEeCchhHHhhhcC-C-----ccccCCccccCCCccCCCCccccCCCC-CCc----hHHHHHHHHhchh-HHHHHHHHH
Q 048643 328 LWVKDPSALVSSLST-N-----PEYLKNKATESKQVVDYKDWQITLSRR-FRS----LKLWLVIRNYGVA-NLRHFLRSH 395 (506)
Q Consensus 328 ~~~r~~~~l~~~~~~-~-----~~yl~~~~~~~~~~~~~~~~~~~~sr~-~~a----l~~~~~l~~~G~~-g~~~~i~~~ 395 (506)
++++++.. .+ +.. . +.|+.-.. .........+.+.. ..+ ..+..+|+.+-.. |++++.+|+
T Consensus 205 l~v~~~~~-~~-~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~ 277 (378)
T PRK03080 205 AILSPRAV-ER-LESYTPARPIPKFFRLTK-----GGKAIENSFKGQTINTPSMLTVEDYLDQLDWANSIGGLDALIART 277 (378)
T ss_pred EEECHHHH-Hh-hhcccCCCCCchhheecc-----chHHhhhhhcCCcccCchHHHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 99996532 21 211 0 11211000 00000001111111 111 2335677777776 899999999
Q ss_pred HHHHHHHHHHHHcCCCCc-----c-----ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeEC
Q 048643 396 VNMAKLFERLVASDKRVS-----P-----SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCG 465 (506)
Q Consensus 396 ~~~a~~l~~~l~~~~~~~-----p-----~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~ 465 (506)
.++++++++.|++.++++ | .+++|++.+.. .....++...+.++|++...+....
T Consensus 278 ~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~i~~~~~~~~~---------------~~~~~~~~~~l~~~~i~v~~g~~~~ 342 (378)
T PRK03080 278 AANASVLYDWAEKTPWATPLVADPATRSNTSVTLDFVDAQ---------------AAVDAAAVAKLLRENGAVDIEPYRD 342 (378)
T ss_pred HHHHHHHHHHHHhCCCcccccCCccccCccEEEEEcCCch---------------HHHHHHHHHHHHHcCCeeccccccC
Confidence 999999999999987654 2 47888764310 0122334555555565432222111
Q ss_pred CEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHc
Q 048643 466 GIYAMRFAVGATLTEERHVMVAWTMVQEQLEAFLT 500 (506)
Q Consensus 466 g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l~~ 500 (506)
....+|++++ ..++++||++++++|+++.++++.
T Consensus 343 ~~~~vRis~~-~~~t~~di~~l~~al~~~~~~~~~ 376 (378)
T PRK03080 343 APNGLRIWCG-PTVEPADVEALTPWLDWAFERLKA 376 (378)
T ss_pred CCCcEEEecC-CCCCHHHHHHHHHHHHHHHHHHhh
Confidence 2468999985 678888999999999998877654
No 59
>PLN02721 threonine aldolase
Probab=99.88 E-value=1.1e-20 Score=192.04 Aligned_cols=299 Identities=15% Similarity=0.111 Sum_probs=187.6
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHH
Q 048643 126 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQ 205 (506)
Q Consensus 126 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 205 (506)
.+|...++|+. +++++|.+ .++++++||++++.++.+.... ++..|++++.+|+++.
T Consensus 38 ~~~~~~~l~~~----la~~~~~~---------~~~~~~~Gs~a~~~~l~~~~~~----------~gd~Vl~~~~~~~~~~ 94 (353)
T PLN02721 38 YDPTALRLEEE----MAKIFGKE---------AALFVPSGTMGNLISVLVHCDV----------RGSEVILGDNSHIHLY 94 (353)
T ss_pred CCHHHHHHHHH----HHHHhCCc---------eeEEecCccHHHHHHHHHHccC----------CCCeEEEcCccceehh
Confidence 35656666665 55556653 3578888899988777665331 4567888999999888
Q ss_pred H---HHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcC-CccEEEEEec-cCCCCCcccC---hhHHHHHHHH
Q 048643 206 K---AAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAG-LVPLFLCATI-GTTAITAVDP---LKPLCDVAKQ 277 (506)
Q Consensus 206 k---a~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g-~~p~~Vv~t~-gtt~tG~idp---l~~I~~ia~~ 277 (506)
+ .+...|+ +++.+|.++ ++.+|+++|+++|++....+ ..+.+|+++. .++++|.+-| +++|+++|++
T Consensus 95 ~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l~~l~~l~~~ 169 (353)
T PLN02721 95 ENGGISTLGGV---HPRTVKNNE--DGTMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYTDKVGELAKR 169 (353)
T ss_pred cccchhhhcCc---eeEecCCCc--CCCcCHHHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHHHHHHHHHHH
Confidence 7 4667788 999998764 56899999999997532211 2345666655 4566787644 8899999999
Q ss_pred hCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCc
Q 048643 278 FGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQV 357 (506)
Q Consensus 278 ~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~ 357 (506)
||+|+|+|+||........... .......+|++++++|||++.|.| .+++.+++... .+.....+..
T Consensus 170 ~g~~livD~a~~~~~~~~~~~~-~~~~~~~~d~~~~s~sK~l~~~~G--~~~~~~~~~~~-~~~~~~~~~~--------- 236 (353)
T PLN02721 170 HGLKLHIDGARIFNASVALGVP-VHRLVKAADSVSVCLSKGLGAPVG--SVIVGSKSFIR-KAKRLRKTLG--------- 236 (353)
T ss_pred cCCEEEEEchhhhcchhhhCCC-HHHHhhhCCEEEEecccccCCcee--eEEecCHHHHH-hHHHHHHhcC---------
Confidence 9999999998753221111111 111123789999999999997744 44445554332 2211000000
Q ss_pred cCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc-----c--ceEEEeecCCCccccc
Q 048643 358 VDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS-----P--SAVMDKLKPKYENCHS 430 (506)
Q Consensus 358 ~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~-----p--~~v~f~~~~~~~~~~~ 430 (506)
++.+........++.. .+...+.+++..++++++.+.|+++++++ | +++.|++....
T Consensus 237 ---------~~~~~~~~~~~~~~~~--l~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~----- 300 (353)
T PLN02721 237 ---------GGMRQVGVLAAAALVA--LQENVPKLEDDHKKAKLLAEGLNQIKGLRVNVAAVETNIVYFDITDGS----- 300 (353)
T ss_pred ---------CCeehhHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhCCCcEEecCCccceEEEEEccCCc-----
Confidence 0000001111111221 12222334555678899999999887763 3 66777764310
Q ss_pred ccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 048643 431 QQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLE 496 (506)
Q Consensus 431 ~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~ 496 (506)
......+.++|.+.|+... +. +..++|+++ ++..+++|+++++++|+++..
T Consensus 301 ----------~~~~~~~~~~L~~~gi~v~-~~---~~~~lR~~~-~~~~~~~~i~~~~~~l~~~~~ 351 (353)
T PLN02721 301 ----------RITAEKLCKSLEEHGVLLM-PG---NSSRIRVVT-HHQISDSDVQYTLSCFQQAAL 351 (353)
T ss_pred ----------cccHHHHHHHHHhCCcEEe-cC---CCceEEEEe-cCcCCHHHHHHHHHHHHHHhh
Confidence 0113567778877787543 32 346899998 467788999999999998764
No 60
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.88 E-value=7.4e-20 Score=188.90 Aligned_cols=293 Identities=12% Similarity=0.056 Sum_probs=193.9
Q ss_pred HHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhC
Q 048643 133 LENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVG 212 (506)
Q Consensus 133 lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G 212 (506)
+..++.+.+++++|.+ ..++++||++|+..++.+... ++..|+++...|.++..+++.++
T Consensus 84 ~~~~le~~ia~~~g~~---------~~ii~~~~~~a~~~~~~~l~~-----------~gd~vi~~~~~~~s~~~~~~~~~ 143 (393)
T TIGR01822 84 IHKELEAKIAAFLGTE---------DTILYASCFDANGGLFETLLG-----------AEDAIISDALNHASIIDGVRLCK 143 (393)
T ss_pred HHHHHHHHHHHHhCCC---------cEEEECchHHHHHHHHHHhCC-----------CCCEEEEeccccHHHHHHHHhcC
Confidence 3344446778888864 357778889998765544322 56788889999999999998887
Q ss_pred CCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeeccccccc
Q 048643 213 IDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSA 292 (506)
Q Consensus 213 ~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~ 292 (506)
. +.+.++ .+|+++|+++|++..+.+.++.+|+.....+++|.+.|+++|+++|++||+|+++|++|+.++
T Consensus 144 ~---~~~~~~-------~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~~l~~i~~la~~~~~~li~De~~~~g~ 213 (393)
T TIGR01822 144 A---KRYRYA-------NNDMADLEAQLKEARAAGARHRLIATDGVFSMDGVIAPLDEICDLADKYDALVMVDECHATGF 213 (393)
T ss_pred C---ceEEeC-------CCCHHHHHHHHHhhhhcCCCceEEEEeCCccCCCCcCCHHHHHHHHHHcCCEEEEECCccccC
Confidence 7 554432 579999999998754333356678877788999999999999999999999999999996544
Q ss_pred ccCccchh--hhcCC-CCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcC-CccccCCccccCCCccCCCCccccCC
Q 048643 293 CICPEFQH--FIDGV-EGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLST-NPEYLKNKATESKQVVDYKDWQITLS 368 (506)
Q Consensus 293 ~~~~~~~~--~~~gi-~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~s 368 (506)
.... ... ...++ ..+|.++.++||+++.+ ..|+++.+ +... ..+.. ...|.. .++
T Consensus 214 ~~~~-~~~~~~~~~~~~~~di~~~s~sK~l~g~-r~G~~~~~-~~~~-~~l~~~~~~~~~-----------------~~~ 272 (393)
T TIGR01822 214 LGPT-GRGSHELCGVMGRVDIITGTLGKALGGA-SGGFTTAR-KEVV-ELLRQRSRPYLF-----------------SNS 272 (393)
T ss_pred cCCC-CCchHHhcCCCCCCeEEEEEChHHhhCC-CcEEEEeC-HHHH-HHHHHhCcccee-----------------cCC
Confidence 3211 111 01122 26899999999998754 46776654 3332 22221 111211 111
Q ss_pred CCC-CchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c--ceEEEeecCCCcccccccccchHHHHHH
Q 048643 369 RRF-RSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS---P--SAVMDKLKPKYENCHSQQLVTEEEAINE 442 (506)
Q Consensus 369 r~~-~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p--~~v~f~~~~~~~~~~~~~~~~~~~~~~~ 442 (506)
... ....+..+++.+ +..+++.++..++++++.+.|++. +++ + +++.+...+. .
T Consensus 273 ~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~i~~~~~-----------------~ 332 (393)
T TIGR01822 273 LPPAVVGASIKVLEML--EASNELRDRLWANTRYFRERMEAA-GFDIKPADHPIIPVMLYDA-----------------V 332 (393)
T ss_pred CCHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHc-CCCCCCCCCCEEEEEeCCH-----------------H
Confidence 111 112233344433 235667788889999999999876 666 2 5565554321 1
Q ss_pred HHHHHHHHHHhcCcEEEeeeeE----CCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 048643 443 FNRELLESINASGKAYMTHAVC----GGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAF 498 (506)
Q Consensus 443 ~~~~l~~~l~~~g~~~~~~~~~----~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l 498 (506)
...++.+.|.++|+ ++.+..+ .+...+|++++ ..++++||+++++.|+++.+++
T Consensus 333 ~~~~l~~~L~~~gI-~v~~~~~~~~~~~~~~iRis~~-~~~t~edi~~~~~~l~~~~~~~ 390 (393)
T TIGR01822 333 LAQRFARRLLEEGI-YVTGFFYPVVPKGQARIRVQIS-AAHTEEQLDRAVEAFTRIGREL 390 (393)
T ss_pred HHHHHHHHHHHCCe-eEeeeCCCCCCCCCceEEEEEC-CCCCHHHHHHHHHHHHHHHHHh
Confidence 24567778888885 4443221 24457999984 6678889999999999987654
No 61
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.88 E-value=2.5e-20 Score=188.67 Aligned_cols=313 Identities=16% Similarity=0.084 Sum_probs=211.7
Q ss_pred hhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEE
Q 048643 115 SGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVV 194 (506)
Q Consensus 115 ~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v 194 (506)
...+.+...|...+...++++.+.++++..+|.+... ...++++|+|+++..++.+... ++..|
T Consensus 23 ~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~-----~~~~~~~~~t~a~~~~~~~~~~-----------~g~~v 86 (350)
T cd00609 23 AALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPP-----EEIVVTNGAQEALSLLLRALLN-----------PGDEV 86 (350)
T ss_pred HhhccCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCc-----ceEEEecCcHHHHHHHHHHhCC-----------CCCEE
Confidence 3455555667777888999999999999998864331 3678899999888776665532 45678
Q ss_pred EeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCH--HHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHH
Q 048643 195 YGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSP--DSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLC 272 (506)
Q Consensus 195 ~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~--~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~ 272 (506)
+++...|.++..+++.+|. +++.+|.+++ +.++. +.+++.+.+ .+.+|+++.+++++|.+.|++++.
T Consensus 87 l~~~~~~~~~~~~~~~~~~---~~~~i~~~~~--~~~~~~~~~~~~~~~~------~~~~v~i~~~~~~tG~~~~~~~l~ 155 (350)
T cd00609 87 LVPDPTYPGYEAAARLAGA---EVVPVPLDEE--GGFLLDLELLEAAKTP------KTKLLYLNNPNNPTGAVLSEEELE 155 (350)
T ss_pred EEcCCCchhHHHHHHHCCC---EEEEEecccc--cCCccCHHHHHhhcCc------cceEEEEECCCCCCCcccCHHHHH
Confidence 8999999999999999998 9999999764 35554 555544332 355788888999999998866554
Q ss_pred ---HHHHHhCCEEEeecccccccccCccchh-hhcCCCCCCeeEEcCccccC-CCCcceEEEEeCchhHHhhhcCCcccc
Q 048643 273 ---DVAKQFGIWVHVDAAYAGSACICPEFQH-FIDGVEGADSFSLNAHKWFF-TTLDCCCLWVKDPSALVSSLSTNPEYL 347 (506)
Q Consensus 273 ---~ia~~~g~~lhVDaA~gg~~~~~~~~~~-~~~gi~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl 347 (506)
++|+++|+|+|+|+||+++......... ...+....|.+..+.||+++ .+.++|++++++.... +.+.....+.
T Consensus 156 ~l~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~~~~-~~~~~~~~~~ 234 (350)
T cd00609 156 ELAELAKKHGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPEELL-ERLKKLLPYT 234 (350)
T ss_pred HHHHHHHhCCeEEEEecchhhceeCCcccccccCcCccCcEEEEeecccccCCcccceEEEecCHHHHH-HHHHHHHHhc
Confidence 8999999999999999876543221100 01122357888889999998 5567888887764333 2332111111
Q ss_pred CCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c---ceEEEee
Q 048643 348 KNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS---P---SAVMDKL 421 (506)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p---~~v~f~~ 421 (506)
. ..........++..++... ++++++.++..++++++.+.|++.+... | ..+.+++
T Consensus 235 ~-----------------~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~g~~~~~~~ 296 (350)
T cd00609 235 T-----------------SGPSTLSQAAAAAALDDGE-EHLEELRERYRRRRDALLEALKELGPLVVVKPSGGFFLWLDL 296 (350)
T ss_pred c-----------------cCCChHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCccEEEEEec
Confidence 0 0011112233444444332 6888889999999999999999876543 3 5555555
Q ss_pred cCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeEC--CEEEEEEEecCCCCCHHHHHHHHHHHHH
Q 048643 422 KPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCG--GIYAMRFAVGATLTEERHVMVAWTMVQE 493 (506)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--g~~~lR~~~~~~~tt~edi~~li~~l~~ 493 (506)
.+. ...+.+.+.+.+.|+......... +..++|++++.+ ++||++++++|++
T Consensus 297 ~~~-----------------~~~~~~~~~l~~~gi~i~~~~~~~~~~~~~iRi~~~~~---~~~i~~~~~al~~ 350 (350)
T cd00609 297 PEG-----------------DDEEFLERLLLEAGVVVRPGSAFGEGGEGFVRLSFATP---EEELEEALERLAE 350 (350)
T ss_pred CCC-----------------ChHHHHHHHHHhCCEEEecccccccCCCCeEEEEeeCC---HHHHHHHHHHhhC
Confidence 432 012345555666676544333332 667999999765 7899999998863
No 62
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.87 E-value=7.7e-20 Score=203.25 Aligned_cols=357 Identities=13% Similarity=0.080 Sum_probs=227.9
Q ss_pred ChhHHhhhCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCccc--cCCCCCCHHHHH-------HHHHHhhcCCCCcc
Q 048643 53 EPGYLRKRLPECAPYNPESMETILQDVQEHIVPGVTHWQSPNYFA--YFPSSGSIAGFL-------GEMLSSGFNVVGFN 123 (506)
Q Consensus 53 ~p~~l~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~--~~~~~~~~~~~~-------~~~l~~~~n~~~~~ 123 (506)
-|..++..-+..+|+ +.++.++++++.+....|.. ...|.| |.+. -.|+++ .+|++++ .+++..
T Consensus 42 iP~~i~~~~~l~lp~-~~sE~e~~~~~~~la~~N~~---~~~~ig~G~y~~--~~P~vi~~~i~~~~~~~t~y-tPyQ~E 114 (954)
T PRK05367 42 VPASIRLAEPLDLPA-ALSEAEALAELRAIASKNKV---FRSYIGQGYYGT--HTPPVILRNILENPAWYTAY-TPYQPE 114 (954)
T ss_pred CCHHHhcCCCCCCCC-CCCHHHHHHHHHHHHhcCCC---CCcccCCCCCCC--cCcHHHHHHHHhCcchhhcc-CCCChH
Confidence 466776666667775 57999999999997766654 223544 3322 223322 2455543 333333
Q ss_pred cccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchH
Q 048643 124 WISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCA 203 (506)
Q Consensus 124 ~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s 203 (506)
..++.....+|.+ .++++|+|++.. +..++.++|.+.- ++..++... + .++..|++++..|++
T Consensus 115 isQG~Leal~~~Q--t~la~LtG~~~a-------naSl~d~aTAa~e-a~~~a~~~~--~-----~~~~~vlv~~~~hP~ 177 (954)
T PRK05367 115 ISQGRLEALLNFQ--TMVADLTGLEIA-------NASLLDEATAAAE-AMALAKRVS--K-----SKSNRFFVDDDVHPQ 177 (954)
T ss_pred HHHHHHHHHHHHH--HHHHHHHCCChh-------hccccccHHHHHH-HHHHhhhhc--c-----CCCCEEEEcCccCHH
Confidence 3455555556555 999999999976 6788888886654 444443321 0 013579999999998
Q ss_pred HHHH----HHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhC
Q 048643 204 LQKA----AQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFG 279 (506)
Q Consensus 204 ~~ka----~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g 279 (506)
.... ++..|+ +|+.+|.+. + ++ .+ .. +.++..-++.+|.+.|+++|+++||++|
T Consensus 178 ~~~v~~t~a~~~G~---ev~~~~~~~--d--~~--------~~------~~-~~vlvq~p~~~G~i~d~~~i~~~ah~~G 235 (954)
T PRK05367 178 TLDVLRTRAEPLGI---EVVVGDAAK--A--LD--------HD------DV-FGVLLQYPGTSGEVRDYTALIAAAHARG 235 (954)
T ss_pred HHHHHHHHHHhCCC---EEEEecCcc--C--CC--------cc------cE-EEEEEecCCCCeeeccHHHHHHHHHHcC
Confidence 6654 456788 999999753 1 11 11 12 3344444788999999999999999999
Q ss_pred CEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCc-----ceEEEEeCchhHHhhhcCCccccCCccccC
Q 048643 280 IWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLD-----CCCLWVKDPSALVSSLSTNPEYLKNKATES 354 (506)
Q Consensus 280 ~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~-----~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~ 354 (506)
+++.||+.+.+..++.+ .... +||.++.+.|||+ +|.+ +|++++|+. +.+.+ .+..+... .+.
T Consensus 236 al~~vda~~~Al~~l~~-pge~-----GaDi~vgs~qkfg-~P~g~GGP~aGflavr~~--~~r~l--pgrivG~s-~d~ 303 (954)
T PRK05367 236 ALVAVAADLLALTLLTP-PGEM-----GADIAVGSAQRFG-VPMGFGGPHAAYFAVRDA--YKRSM--PGRIVGVS-VDA 303 (954)
T ss_pred CEEEEEehhhhccCCCC-hhhc-----CCCEEEeeCcccC-CCCCCCCCCEEEEEECHH--HHhhC--CCCeeeee-ccc
Confidence 99999996633333322 1221 8999999999995 4444 999999964 22222 11222211 111
Q ss_pred CCccCCC--Ccccc-CCCCCCc------------hHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c--
Q 048643 355 KQVVDYK--DWQIT-LSRRFRS------------LKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS---P-- 414 (506)
Q Consensus 355 ~~~~~~~--~~~~~-~sr~~~a------------l~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p-- 414 (506)
.+...+. ..+-+ .-||-.+ +..++++.++|.+|++++.++...++++++++|++ .+++ +
T Consensus 304 ~g~~~~~lalqtReqhiRrekaTsNict~qaL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~-~G~~~~~~~~ 382 (954)
T PRK05367 304 AGNPALRLALQTREQHIRREKATSNICTAQVLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRA-LGLEVVHDSF 382 (954)
T ss_pred CCCcccccccccccccccccccccccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHh-cCcccCCCCC
Confidence 1111111 01111 1233222 22334456689999999999999999999999987 4777 2
Q ss_pred -ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHH
Q 048643 415 -SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQ 492 (506)
Q Consensus 415 -~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~ 492 (506)
.+++|++... ..++.+++.+.|+.. . ......+|+|+ +..+|++||++++++|.
T Consensus 383 f~~~~~~~~~~-------------------~~~i~~~l~~~gi~~-~---~~~~~~l~is~-~e~~t~~did~l~~~l~ 437 (954)
T PRK05367 383 FDTLTVEVGGD-------------------AAAVLARALAAGINL-R---RVDDDHVGISL-DETTTREDLAALLAVFG 437 (954)
T ss_pred CCeEEEeCCCC-------------------HHHHHHHHHHCCcee-c---cccCCEEEEEe-cccCCHHHHHHHHHHHc
Confidence 7777875311 356777787888743 1 11134699999 47788889999999997
No 63
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.87 E-value=1.2e-19 Score=185.61 Aligned_cols=329 Identities=12% Similarity=0.104 Sum_probs=227.2
Q ss_pred CHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHh
Q 048643 104 SIAGFLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNK 183 (506)
Q Consensus 104 ~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~ 183 (506)
..|..+.+.+...++.....|....+..++.+.+.+++.+.+|+..+. ..+.++|+|+++|+..++.+..+
T Consensus 41 ~~p~~i~~a~~~a~~~~~~~Y~~~~G~~~LReaia~~~~~~~~~~~~~----~~eiivt~Ga~~al~~~~~a~~~----- 111 (393)
T COG0436 41 PTPEHIIEAAIEALEEGGTHYTPSAGIPELREAIAEKYKRRYGLDVDP----EEEIIVTAGAKEALFLAFLALLN----- 111 (393)
T ss_pred CCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC----CCeEEEeCCHHHHHHHHHHHhcC-----
Confidence 455555666655555433255577789999999999999999854432 12599999999999998888766
Q ss_pred hcccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCC-CCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCC
Q 048643 184 IGRENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKS-SSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAI 262 (506)
Q Consensus 184 ~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~-~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~t 262 (506)
++..|+++++.+.++.....++|. +++.||++.. .+|.+|++.|+++++++++ +|+++.++|+|
T Consensus 112 ------pGDeVlip~P~Y~~y~~~~~~~gg---~~v~v~l~~~~~~f~~d~~~l~~~i~~ktk------~i~ln~P~NPT 176 (393)
T COG0436 112 ------PGDEVLIPDPGYPSYEAAVKLAGG---KPVPVPLDEEENGFKPDLEDLEAAITPKTK------AIILNSPNNPT 176 (393)
T ss_pred ------CCCEEEEeCCCCcCHHHHHHhcCC---EEEEEeCCcCccCCcCCHHHHHhhcCccce------EEEEeCCCCCc
Confidence 677788999999999999999999 9999998654 3799999999999998665 89999999999
Q ss_pred Ccc---cChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCC--CCeeEE-cCccccCC-CCcceEEEEeCchh
Q 048643 263 TAV---DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEG--ADSFSL-NAHKWFFT-TLDCCCLWVKDPSA 335 (506)
Q Consensus 263 G~i---dpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~--aDsi~~-~~hK~l~~-p~~~g~~~~r~~~~ 335 (506)
|++ +.+++|+++|++||+|++.|.+|.....--..+...+. +.. -..|++ ++.|.+++ .+-+|++...++..
T Consensus 177 Gav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~-~~~~~~~~i~i~s~SK~~~mtGwRvG~~v~~~~~l 255 (393)
T COG0436 177 GAVYSKEELKAIVELAREHDIIIISDEIYEELVYDGAEHPSILE-LAGARDRTITINSFSKTYGMTGWRIGWVVGPPEEL 255 (393)
T ss_pred CcCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhh-cCCCcceEEEEecccccccccccceeEeecChHHH
Confidence 999 45899999999999999999999765432211222211 112 125555 47899884 47899988875433
Q ss_pred HHhhhcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhc----hhHHHHHHHHHHHHHHHHHHHHHcCCC
Q 048643 336 LVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYG----VANLRHFLRSHVNMAKLFERLVASDKR 411 (506)
Q Consensus 336 l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G----~~g~~~~i~~~~~~a~~l~~~l~~~~~ 411 (506)
. +.+..-..|+. .|.. .+.-.++...+. .+..+.+.+...++++.+.+.|.+.++
T Consensus 256 ~-~~~~~~~~~~~-----------------~~~~---~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~~~~g 314 (393)
T COG0436 256 I-AALRKLKSYLT-----------------SCAP---TPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNEIGG 314 (393)
T ss_pred H-HHHHHHHHhcc-----------------cCCC---HHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 2 22221111221 1111 122223333332 235677778899999999999999988
Q ss_pred Cc----c--ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeEC----CEEEEEEEecCCCCCH
Q 048643 412 VS----P--SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCG----GIYAMRFAVGATLTEE 481 (506)
Q Consensus 412 ~~----p--~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~----g~~~lR~~~~~~~tt~ 481 (506)
++ | ....|--.+.. ....++.+.|.++..+.+.|+... |.+++|++++. ++
T Consensus 315 ~~~~~~p~Ga~Y~~~~i~~~----------------~d~~~f~~~Ll~~~gV~v~PG~~Fg~~~g~~~vRis~~~---~~ 375 (393)
T COG0436 315 LSVVKPPEGAFYLFPKIPEL----------------LDSEEFAKKLLEEAGVAVVPGSGFGEPPGEGYVRLSLAT---SE 375 (393)
T ss_pred eeeccCCCeeEEEEeecCCC----------------CCHHHHHHHHHHhCCEEEecccccCCCCCCCeEEEEEec---CH
Confidence 87 4 34444322210 112455666665555556655443 45799999965 34
Q ss_pred HHHHHHHHHHHHHHHH
Q 048643 482 RHVMVAWTMVQEQLEA 497 (506)
Q Consensus 482 edi~~li~~l~~~~~~ 497 (506)
+++++.++.|.+..+.
T Consensus 376 ~~l~~a~~rl~~~~~~ 391 (393)
T COG0436 376 ETLEEALRRLARFLAE 391 (393)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 7888888888887654
No 64
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.87 E-value=1.4e-20 Score=181.77 Aligned_cols=298 Identities=17% Similarity=0.178 Sum_probs=194.0
Q ss_pred CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCC
Q 048643 121 GFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQT 200 (506)
Q Consensus 121 ~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~ 200 (506)
...|..+|....+| +++++++|. . .++|+++||+||..+|.+... +.-.|+|...+
T Consensus 28 ~~~YG~D~~~~~~e----~~~ae~~g~-~--------a~~Fv~sGT~aN~lal~~~~~-----------~~~~vi~~~~a 83 (342)
T COG2008 28 DDVYGEDPTTNALE----QRIAELFGK-E--------AALFVPSGTQANQLALAAHCQ-----------PGESVICHETA 83 (342)
T ss_pred CCCCCCCHHHHHHH----HHHHHHhCC-c--------eEEEecCccHHHHHHHHHhcC-----------CCCeEEEeccc
Confidence 45677787777776 558888888 3 579999999999999988764 66778999999
Q ss_pred chHHHHHH--HHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHH-hcCCccEEEEEeccCCCCCcccC---hhHHHHH
Q 048643 201 HCALQKAA--QIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDV-EAGLVPLFLCATIGTTAITAVDP---LKPLCDV 274 (506)
Q Consensus 201 H~s~~ka~--~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~-~~g~~p~~Vv~t~gtt~tG~idp---l~~I~~i 274 (506)
|....+.. ..++ ++.++++.+..+|.|++++++.+|+.+- -...+|.+|..|..| ..|.+-| |++|.++
T Consensus 84 Hi~~~E~Ga~~~~~----~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~t-e~GtVy~l~el~~i~~~ 158 (342)
T COG2008 84 HIYTDECGAPEFFG----GGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTAT-EGGTVYPLDELEAISAV 158 (342)
T ss_pred cceecccCcHHHHc----CCceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccC-CCceecCHHHHHHHHHH
Confidence 99888753 3443 2344555554578999999999998631 123356666666554 7799965 5677778
Q ss_pred HHHhCCEEEeecccccccccC--ccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccc
Q 048643 275 AKQFGIWVHVDAAYAGSACIC--PEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKAT 352 (506)
Q Consensus 275 a~~~g~~lhVDaA~gg~~~~~--~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~ 352 (506)
||++|+.||+|||--+.++.. +..... -..+||+++.+.|.++.|. |.+++-+.+...++ .|......
T Consensus 159 ~k~~~l~LHmDGAR~~nA~valg~~~~~~---~~~~D~v~~~~tK~g~~~~--gAiv~gn~~~~~~a-----~~~rK~~G 228 (342)
T COG2008 159 CKEHGLPLHMDGARLANALVALGVALKTI---KSYVDSVSFCLTKGGGAPV--GAIVFGNRDFAKRA-----RRWRKRAG 228 (342)
T ss_pred HHHhCCceeechHHHHHHHHHcCCCHHHH---HhhCCEEEEecccCCccee--eeEEEcCHHHHHHH-----HHHHHHhc
Confidence 999999999999865444332 221221 1389999999999999884 44555555433221 22221100
Q ss_pred cCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c---ceEEEeecCCCc
Q 048643 353 ESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS---P---SAVMDKLKPKYE 426 (506)
Q Consensus 353 ~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p---~~v~f~~~~~~~ 426 (506)
++-|..+-+++ ..+-++..+-+...-++..++|++|++.+.+.||++ | |+|-+++...
T Consensus 229 -------------gl~~k~r~laA-~~~~~l~~~~~~~~~~Han~mA~~La~~~~~~~G~~~~~~~~tN~vf~~l~~~-- 292 (342)
T COG2008 229 -------------GLMRKARFLAA-QGLYALEDDVWRLAADHANAMAARLAEGLEAKPGVKLAFPVETNMVFVRLPES-- 292 (342)
T ss_pred -------------ccHhhhhHHHH-HHHHHHhccHHHHHHHHHHHHHHHHHHhhhhcCCceeccCCcccEEEEECChH--
Confidence 11122222211 112222334456666777778999999999888988 3 7776666432
Q ss_pred ccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCE--EEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 048643 427 NCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGI--YAMRFAVGATLTEERHVMVAWTMVQEQL 495 (506)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~--~~lR~~~~~~~tt~edi~~li~~l~~~~ 495 (506)
.+ +.+...|..+-. .++.+. ..+|+++ ++.|+++||++++..++++.
T Consensus 293 -------------------~i-~~l~~~~~~~~~-~~~~~~~~~~vRfvt-s~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 293 -------------------AI-EALRLAGALFYR-GVLIGAHGEIVRFVT-SWATSEEDVDELVAAIKALL 341 (342)
T ss_pred -------------------HH-HHHHhhchhhee-eeeccCCCceEEEEe-eccCCHHHHHHHHHHHHHhh
Confidence 01 333333442222 122222 4799987 79999999999999988764
No 65
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.86 E-value=1e-19 Score=187.72 Aligned_cols=325 Identities=12% Similarity=0.123 Sum_probs=211.2
Q ss_pred HHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcc
Q 048643 107 GFLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGR 186 (506)
Q Consensus 107 ~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~ 186 (506)
..+.+.+...+......|...++...+++.+.+|+.+.+|.+.+. ...++|+|+++++..++.+...
T Consensus 49 ~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~-----~~i~~t~G~~~al~~~~~~l~~-------- 115 (391)
T PRK08361 49 KNIKEAAKRALDEGWTHYTPNAGIPELREAIAEYYKKFYGVDVDV-----DNVIVTAGAYEATYLAFESLLE-------- 115 (391)
T ss_pred HHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCc-----ccEEEeCChHHHHHHHHHHhcC--------
Confidence 445555555554434456556678899999999999888754321 3789999999998776665432
Q ss_pred cCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCccc
Q 048643 187 ENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVD 266 (506)
Q Consensus 187 ~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~id 266 (506)
++..|++++.+|.++...+...|+ +++.+|++.++++.+|+++|++++++.+ .+|+++.++|+||.+-
T Consensus 116 ---~g~~Vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~i~~~~------~~v~i~~p~NPtG~~~ 183 (391)
T PRK08361 116 ---EGDEVIIPDPAFVCYVEDAKIAEA---KPIRIPLREENEFQPDPDELLELITKRT------RMIVINYPNNPTGATL 183 (391)
T ss_pred ---CCCEEEEcCCCCcccHHHHHHcCC---EEEEEecCCccCCCCCHHHHHHhccccc------EEEEEeCCCCCCCcCc
Confidence 556788889999999999999999 9999999865567899999999887643 3677888999999998
Q ss_pred C---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCC-CcceEEEEeCchhHHhhhcC
Q 048643 267 P---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSALVSSLST 342 (506)
Q Consensus 267 p---l~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~ 342 (506)
| +++|+++|+++++++++|++|+.+................-+.++.+++|.++.| ..+|++++.+ .... .+..
T Consensus 184 ~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~GlRiG~~~~~~-~~~~-~~~~ 261 (391)
T PRK08361 184 DKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYAPDNTILANSFSKTFAMTGWRLGFVIAPE-QVIK-DMIK 261 (391)
T ss_pred CHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhhcCCCCEEEEecCchhcCCcHhhhhhhccCH-HHHH-HHHH
Confidence 8 8899999999999999999997654321111111111113456778899998755 3378887743 3322 2211
Q ss_pred CccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHh--ch--hHHHHHHHHHHHHHHHHHHHHHcCCCCc---c-
Q 048643 343 NPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNY--GV--ANLRHFLRSHVNMAKLFERLVASDKRVS---P- 414 (506)
Q Consensus 343 ~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--G~--~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p- 414 (506)
...+... + ...+...++...+ +. +.++++.++..++.+.+.+.|++.++++ |
T Consensus 262 ~~~~~~~--------------~------~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~p~ 321 (391)
T PRK08361 262 LHAYIIG--------------N------VASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKEMPHIKVFEPK 321 (391)
T ss_pred HHhhhcc--------------C------CChHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHhCCCCeecCCC
Confidence 1111110 0 0112223333333 21 3467777778888899999999887776 4
Q ss_pred -ceEEE-eecCCCcccccccccchHHHHHHHHHHHHHHHHh-cCcEEEeeeeE--CCEEEEEEEecCCCCCHHHHHHHHH
Q 048643 415 -SAVMD-KLKPKYENCHSQQLVTEEEAINEFNRELLESINA-SGKAYMTHAVC--GGIYAMRFAVGATLTEERHVMVAWT 489 (506)
Q Consensus 415 -~~v~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~--~g~~~lR~~~~~~~tt~edi~~li~ 489 (506)
+.+++ ++.+... + ..++.+.+.+ .|+....+..+ .+..++|++++. ++++++..++
T Consensus 322 g~~~~~~~l~~~~~---------~-------~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~---~~~~l~~al~ 382 (391)
T PRK08361 322 GAFYVFANIDETGM---------S-------SEDFAEWLLEKARVVVIPGTAFGKAGEGYIRISYAT---SKEKLIEAME 382 (391)
T ss_pred EEEEEEEECCCCCC---------C-------HHHHHHHHHHhCCEEEcCchhhCCCCCCEEEEEecC---CHHHHHHHHH
Confidence 33333 4432110 0 2345555544 56643333222 235789999963 5668888888
Q ss_pred HHHHHHHH
Q 048643 490 MVQEQLEA 497 (506)
Q Consensus 490 ~l~~~~~~ 497 (506)
.|.+..++
T Consensus 383 ~l~~~l~~ 390 (391)
T PRK08361 383 RMEKALEE 390 (391)
T ss_pred HHHHHHhc
Confidence 88776543
No 66
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.86 E-value=3.9e-19 Score=180.34 Aligned_cols=329 Identities=10% Similarity=-0.010 Sum_probs=204.8
Q ss_pred CCCCccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHH
Q 048643 91 QSPNYFAYFPSSGSIAGFLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAIL 170 (506)
Q Consensus 91 ~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l 170 (506)
.+.-|+|.-. .+.....+.+.+....++.. .+...........++.+++++++|.+ ..+++++|+++++
T Consensus 7 ~~~~~~~~~~-~~~v~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~la~~~~~~---------~~iv~~sg~~a~~ 75 (349)
T cd06454 7 CSNDYLGLAN-HPEVIEAAKEALDKYGVGAG-GSRLISGTSDLHEELEEELAEFHGKE---------AALVFSSGYAAND 75 (349)
T ss_pred ccCCccccCC-CHHHHHHHHHHHHHhCCCCC-CcCeecCCchHHHHHHHHHHHHhCCC---------CEEEeccHHHHHH
Confidence 4445666532 13344444555544322211 11111123445556667788888875 2467777788888
Q ss_pred HHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCcc
Q 048643 171 CTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVP 250 (506)
Q Consensus 171 ~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p 250 (506)
.++.++.. ++..|+++...|.++..+++..|. +++.++ .+|++.+++++++.. ...++
T Consensus 76 ~~~~~~~~-----------~gd~Vl~~~~~~~~~~~~~~~~g~---~~~~~~-------~~~~~~le~~i~~~~-~~~~~ 133 (349)
T cd06454 76 GVLSTLAG-----------KGDLIISDSLNHASIIDGIRLSGA---KKRIFK-------HNDMEDLEKLLREAR-RPYGK 133 (349)
T ss_pred HHHHHhcC-----------CCCEEEEehhhhHHHHHHHHHcCC---ceEEec-------CCCHHHHHHHHHHhh-ccCCC
Confidence 77655432 556788899999999999999998 888775 357889999987643 12346
Q ss_pred EEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecccccccccCcc-chhhhc-CCCCCCeeEEcCccccCCCCcceEE
Q 048643 251 LFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPE-FQHFID-GVEGADSFSLNAHKWFFTTLDCCCL 328 (506)
Q Consensus 251 ~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~-~~~~~~-gi~~aDsi~~~~hK~l~~p~~~g~~ 328 (506)
.+|+++.+++++|.+.|+++|+++|+++|+++++|++|+.+...... .-.... ...+.|.++.++||+++.+ + |++
T Consensus 134 ~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~-g-G~i 211 (349)
T cd06454 134 KLIVTEGVYSMDGDIAPLPELVDLAKKYGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFGAV-G-GYI 211 (349)
T ss_pred eEEEEeccccCCCCccCHHHHHHHHHHcCCEEEEEccccccccCCCCCChhhhccccccCcEEEeechhhhccc-C-CEE
Confidence 68888888999999999999999999999999999999744332110 000011 1236899999999999863 2 555
Q ss_pred EEeCchhHHhhhcCCccccCCccccCCCccCCCCccccCCCC-CCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHH
Q 048643 329 WVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRR-FRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVA 407 (506)
Q Consensus 329 ~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~ 407 (506)
+.+ +..+.........|.. ..+.. .....+..+++.+-. +.++.++..++++++.+.|.
T Consensus 212 ~~~-~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~l~~~l~ 271 (349)
T cd06454 212 AGS-KELIDYLRSYARGFIF-----------------STSLPPAVAAAALAALEVLQG--GPERRERLQENVRYLRRGLK 271 (349)
T ss_pred ECC-HHHHHHHHHhchhhhc-----------------cCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHH
Confidence 443 3333221111111111 01111 112234444544422 45677888899999999998
Q ss_pred cCCCCc---c---ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeE----CCEEEEEEEecCC
Q 048643 408 SDKRVS---P---SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVC----GGIYAMRFAVGAT 477 (506)
Q Consensus 408 ~~~~~~---p---~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~----~g~~~lR~~~~~~ 477 (506)
+. +++ + .++++...+. ....++.+.|.++|+.. .+... .+..++|+++. .
T Consensus 272 ~~-g~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~L~~~gI~~-~~~~~~~~~~~~~~iRi~~~-~ 331 (349)
T cd06454 272 EL-GFPVGGSPSHIIPPLIGDDP-----------------AKAVAFSDALLERGIYV-QAIRYPTVPRGTARLRISLS-A 331 (349)
T ss_pred hc-CCcccCCCCCcEEEEeCCCh-----------------HHHHHHHHHHHhCCceE-EEecCCccCCCCCeEEEEEe-C
Confidence 86 665 2 3334433211 12467788888888744 32211 22468999984 5
Q ss_pred CCCHHHHHHHHHHHHHH
Q 048643 478 LTEERHVMVAWTMVQEQ 494 (506)
Q Consensus 478 ~tt~edi~~li~~l~~~ 494 (506)
..++++|++++++|+++
T Consensus 332 ~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 332 AHTKEDIDRLLEALKEV 348 (349)
T ss_pred CCCHHHHHHHHHHHHHh
Confidence 67788999999999875
No 67
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.86 E-value=2e-19 Score=184.86 Aligned_cols=323 Identities=12% Similarity=0.109 Sum_probs=210.6
Q ss_pred HHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcc
Q 048643 107 GFLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGR 186 (506)
Q Consensus 107 ~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~ 186 (506)
..+.+.+...+......|....+..++.+.+.+|+.+.+|.+.+. ...++|+|+++++..++.+...
T Consensus 40 ~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~la~~~~~~~~~~~~~-----~~i~~t~g~~~al~~~~~~l~~-------- 106 (382)
T PRK06108 40 DFIRDAAAAALADGETFYTHNLGIPELREALARYVSRLHGVATPP-----ERIAVTSSGVQALMLAAQALVG-------- 106 (382)
T ss_pred HHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcCc-----ceEEEeCChHHHHHHHHHHhcC--------
Confidence 344555554444333446666778899999999999998843321 2788899999888776665432
Q ss_pred cCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCC-CCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc
Q 048643 187 ENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKS-SSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV 265 (506)
Q Consensus 187 ~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~-~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i 265 (506)
++..|+++..+|..+...++.+|+ +++.+|.+.+ +++.+|+++|++.+++. +.+|+++.++|+||.+
T Consensus 107 ---~gd~vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~~d~~~l~~~~~~~------~~~i~l~~p~NPtG~~ 174 (382)
T PRK06108 107 ---PGDEVVAVTPLWPNLVAAPKILGA---RVVCVPLDFGGGGWTLDLDRLLAAITPR------TRALFINSPNNPTGWT 174 (382)
T ss_pred ---CCCEEEEeCCCccchHHHHHHCCC---EEEEeeCCCCCCCccCCHHHHHHhcCcc------ceEEEEECCCCCCCcc
Confidence 456678888999999999999999 9999999753 35789999999988643 3367788899999977
Q ss_pred c---ChhHHHHHHHHhCCEEEeeccccccccc-Cccchhhhc--CCCCCCeeEEcCccccCC-CCcceEEEEeCchhHHh
Q 048643 266 D---PLKPLCDVAKQFGIWVHVDAAYAGSACI-CPEFQHFID--GVEGADSFSLNAHKWFFT-TLDCCCLWVKDPSALVS 338 (506)
Q Consensus 266 d---pl~~I~~ia~~~g~~lhVDaA~gg~~~~-~~~~~~~~~--gi~~aDsi~~~~hK~l~~-p~~~g~~~~r~~~~l~~ 338 (506)
- ++++|+++|+++|+|+++|.+|+.+..- ......... ....-..+..+++|.++. ...+|+++.+. .. .+
T Consensus 175 ~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~~~-~~-~~ 252 (382)
T PRK06108 175 ASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGWLVAPP-AL-GQ 252 (382)
T ss_pred cCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCcccceeeeeCCH-HH-HH
Confidence 4 5788999999999999999999876542 111111011 011223557789998864 56789988753 22 22
Q ss_pred hhcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHh--chhHHHHHHHHHHHHHHHHHHHHHcCCCCc---
Q 048643 339 SLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNY--GVANLRHFLRSHVNMAKLFERLVASDKRVS--- 413 (506)
Q Consensus 339 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~--- 413 (506)
.+.....|.. .+. ..+...++...+ +.+.++++.++..++.+++.+.|++.++++
T Consensus 253 ~~~~~~~~~~-----------------~~~---~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 312 (382)
T PRK06108 253 VLEKLIEYNT-----------------SCV---AQFVQRAAVAALDEGEDFVAELVARLRRSRDHLVDALRALPGVEVAK 312 (382)
T ss_pred HHHHHHHhcc-----------------cCC---ChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhCCCCcccC
Confidence 2221111110 000 111112222222 445677888888999999999998887877
Q ss_pred c--ce-EEEeecCCCcccccccccchHHHHHHHHHHHHHHHH-hcCcEEEeeeeE--CCEEEEEEEecCCCCCHHHHHHH
Q 048643 414 P--SA-VMDKLKPKYENCHSQQLVTEEEAINEFNRELLESIN-ASGKAYMTHAVC--GGIYAMRFAVGATLTEERHVMVA 487 (506)
Q Consensus 414 p--~~-v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~--~g~~~lR~~~~~~~tt~edi~~l 487 (506)
| +. +.+++.+. ....++.+.+. +.|+....+..+ .+..++|+++.. ++++++++
T Consensus 313 p~~g~~~~~~l~~~-----------------~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ris~~~---~~~~l~~~ 372 (382)
T PRK06108 313 PDGAMYAFFRIPGV-----------------TDSLALAKRLVDEAGLGLAPGTAFGPGGEGFLRWCFAR---DPARLDEA 372 (382)
T ss_pred CCeeEEEEEeCCCC-----------------CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC---CHHHHHHH
Confidence 4 33 34454321 01245666664 456644333322 235799999964 67799999
Q ss_pred HHHHHHHHH
Q 048643 488 WTMVQEQLE 496 (506)
Q Consensus 488 i~~l~~~~~ 496 (506)
++.|.++.+
T Consensus 373 l~~l~~~l~ 381 (382)
T PRK06108 373 VERLRRFLA 381 (382)
T ss_pred HHHHHHHHh
Confidence 988877643
No 68
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.86 E-value=3.4e-19 Score=183.96 Aligned_cols=329 Identities=13% Similarity=0.086 Sum_probs=214.6
Q ss_pred HHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcc
Q 048643 107 GFLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGR 186 (506)
Q Consensus 107 ~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~ 186 (506)
..+.+.+...+......|....+...+++.+.+|+.+..|...+. ...++|+|+++++..++.+...
T Consensus 47 ~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~-----~~i~~~~g~~~a~~~~~~~~~~-------- 113 (393)
T PRK05764 47 EHIKEAAIEALDDGKTKYTPAAGIPELREAIAAKLKRDNGLDYDP-----SQVIVTTGAKQALYNAFMALLD-------- 113 (393)
T ss_pred HHHHHHHHHHHhcCCCCcCCCCChHHHHHHHHHHHHHHhCCCCCH-----HHEEEeCCcHHHHHHHHHHhcC--------
Confidence 345555555554444456666677899999999998887753221 2689999999988776665432
Q ss_pred cCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc-
Q 048643 187 ENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV- 265 (506)
Q Consensus 187 ~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i- 265 (506)
++..|+++...|..+..+++.+|. +++.+|.++++++.+|++.|++++++.+ .+|+++.++|+||.+
T Consensus 114 ---~gd~vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~~------~~v~~~~p~NPtG~~~ 181 (393)
T PRK05764 114 ---PGDEVIIPAPYWVSYPEMVKLAGG---VPVFVPTGEENGFKLTVEQLEAAITPKT------KALILNSPSNPTGAVY 181 (393)
T ss_pred ---CCCEEEecCCCCcchHHHHHHcCC---EEEEEecCcccCCcCCHHHHHHhhCccc------eEEEEECCCCCCCccc
Confidence 456788899999999999999999 9999999765567899999999886432 367788899999998
Q ss_pred --cChhHHHHHHHHhCCEEEeecccccccccCcc---chhhhcCCCCCCeeEEcCccccCCC-CcceEEEEeCchhHHhh
Q 048643 266 --DPLKPLCDVAKQFGIWVHVDAAYAGSACICPE---FQHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSALVSS 339 (506)
Q Consensus 266 --dpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~---~~~~~~gi~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~ 339 (506)
+++++|+++|++||+|+++|.+|+.+..-... ..........-+.+..++.|.++.| ..+|+++. ++... +.
T Consensus 182 ~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~i~~-~~~~~-~~ 259 (393)
T PRK05764 182 SPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTITVNGFSKAYAMTGWRLGYAAG-PKELI-KA 259 (393)
T ss_pred CHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCCCcCCEEEEecCcccccCccceeEEEec-CHHHH-HH
Confidence 45889999999999999999999765431111 1111112223456667789999855 34777764 33322 22
Q ss_pred hcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhc--hhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c
Q 048643 340 LSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYG--VANLRHFLRSHVNMAKLFERLVASDKRVS---P 414 (506)
Q Consensus 340 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G--~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p 414 (506)
+.....+. +.....+..+.+.+.+. .+.+.++.++..++++++.+.|++++++. |
T Consensus 260 ~~~~~~~~--------------------~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~ 319 (393)
T PRK05764 260 MSKLQSHS--------------------TSNPTSIAQYAAVAALNGPQDEVEEMRQAFEERRDLMVDGLNEIPGLECPKP 319 (393)
T ss_pred HHHHHhhc--------------------ccCCChHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhhCCCCcccCC
Confidence 21100000 00112334455555542 45566777778888999999999987877 4
Q ss_pred --ce-EEEeecCCCcccccccccchHHHHHHHHHHHHHHHHh-cCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHH
Q 048643 415 --SA-VMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINA-SGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTM 490 (506)
Q Consensus 415 --~~-v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~ 490 (506)
+. +.+++.+.. .. ......++.+.+.+ .|+.+..+..+....++|++++. ++++++++++.
T Consensus 320 ~g~~~~~~~~~~~~----------~~--~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~vRis~~~---~~~~~~~~i~~ 384 (393)
T PRK05764 320 EGAFYVFPNVSKLL----------GK--SITDSLEFAEALLEEAGVAVVPGIAFGAPGYVRLSYAT---SLEDLEEGLER 384 (393)
T ss_pred CcceEEEEeccccc----------cc--ccCCHHHHHHHHHHhCCEEEccccccCCCCEEEEEecC---CHHHHHHHHHH
Confidence 33 333443210 00 00012456666554 56654443333335789999863 58899999999
Q ss_pred HHHHHHH
Q 048643 491 VQEQLEA 497 (506)
Q Consensus 491 l~~~~~~ 497 (506)
|.++.++
T Consensus 385 l~~~~~~ 391 (393)
T PRK05764 385 IERFLES 391 (393)
T ss_pred HHHHHHh
Confidence 9988764
No 69
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.86 E-value=1.7e-20 Score=190.53 Aligned_cols=331 Identities=12% Similarity=0.040 Sum_probs=214.2
Q ss_pred ccCCCCCCHHHHHHHHHHhhc----CCCCcccccC---hhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCC-chHH
Q 048643 97 AYFPSSGSIAGFLGEMLSSGF----NVVGFNWISS---PAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGT-TCEA 168 (506)
Q Consensus 97 ~~~~~~~~~~~~~~~~l~~~~----n~~~~~~~~~---p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~g-gt~a 168 (506)
.|.|++...|..+.+.+...+ |.....+..+ +.+.++-.++++.+++++|.+.+. ..+||+| ||++
T Consensus 2 ~~~pGp~~~p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~~------~vvf~~gs~T~a 75 (355)
T cd00611 2 NFSAGPAALPEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDNY------KVLFLQGGATGQ 75 (355)
T ss_pred CCCCCCCCCCHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCc------eEEEEcCCchHH
Confidence 356777777776766666655 4444455555 566688889999999999986543 6788877 8888
Q ss_pred HHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccC-HHHHHHHHHHHHhcC
Q 048643 169 ILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLS-PDSLLTQINLDVEAG 247 (506)
Q Consensus 169 ~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d-~~~L~~~i~~~~~~g 247 (506)
+-.++..... ++.+..+|+++...|.+ .+.++..|+ +++.++++++++ ..+ ++..+..+.++
T Consensus 76 ~~~~~~~l~~--------~~~~~~~i~~g~~~~~~-~~~a~~~g~---~~~~~~~~~~g~-~~~~~~~~~~~~~~~---- 138 (355)
T cd00611 76 FAAVPLNLLG--------DKGTADYVVTGAWSAKA-AKEAKRYGG---VVVIVAAKEEGK-YTKIPDVETWDLAPD---- 138 (355)
T ss_pred HHHHHHhcCC--------CCCeEEEEECCHHHHHH-HHHHHhcCC---CcEEEecccccC-CCCCCCHhhcCCCCC----
Confidence 7655544311 11245566666555544 445677798 999999864321 213 22222333333
Q ss_pred CccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceE
Q 048643 248 LVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCC 327 (506)
Q Consensus 248 ~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~ 327 (506)
+.+|++++.+|.+|.+ +. ++++.||+.+.||++++.+....+-- ..|.+..++||+++ |.|.|+
T Consensus 139 --~~lV~~~h~~t~tG~~--~~---~i~~~~g~~~~VDa~qs~g~~~idv~--------~~~~~~ss~~K~lG-P~G~g~ 202 (355)
T cd00611 139 --AAYVHYCSNETIHGVE--FD---EVPDTGGVPLVADMSSNILSRPIDVS--------KFGVIYAGAQKNLG-PAGVTV 202 (355)
T ss_pred --CCEEEEeCCcccccEE--cc---eecccCCCeEEEEccccccCCCCCHH--------HhCEEEeecccccC-CCceEE
Confidence 3489999999999997 22 45556999999999998888776532 23334455999875 999999
Q ss_pred EEEeCchhHHhhhcC-CccccCCccccCCCccCCCCccccCCCC-CCchHHHHHHHHhchh-HHHHHHHHHHHHHHHHHH
Q 048643 328 LWVKDPSALVSSLST-NPEYLKNKATESKQVVDYKDWQITLSRR-FRSLKLWLVIRNYGVA-NLRHFLRSHVNMAKLFER 404 (506)
Q Consensus 328 ~~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~l~~~G~~-g~~~~i~~~~~~a~~l~~ 404 (506)
++++++..- + +.. .+.+..... ...... . ..+-. ...+.+..+++.+-.+ |++++.+++.++++++.+
T Consensus 203 l~~~~~~~~-~-~~~~~~~~~~~~~-----~~~~~~-~-~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~ 273 (355)
T cd00611 203 VIVRKDLLG-K-ARKITPSMLNYKT-----HADNNS-L-YNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYD 273 (355)
T ss_pred EEECHHHHh-h-cccCCCCcccHHH-----HHhcCC-C-CCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 999875431 1 111 111111000 000000 0 11211 1336778888888777 799999999999999999
Q ss_pred HHHcCCCCc-----c-----ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEe
Q 048643 405 LVASDKRVS-----P-----SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAV 474 (506)
Q Consensus 405 ~l~~~~~~~-----p-----~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~ 474 (506)
.|+++|++. | .+++|++... .+..++.+.+.++|.+ .... ....+.+|+|+
T Consensus 274 ~l~~~~gl~~~~~~~~~rs~~vvsf~~~~~-----------------~l~~~~~~~~~r~G~~-~~~~-~~~~g~vR~S~ 334 (355)
T cd00611 274 TIDNSNGFYRGPVDKRARSRMNVPFRLGKE-----------------ELEKEFLKEAEAAGMI-GLKG-HRSVGGIRASI 334 (355)
T ss_pred HHHhCccccccCCCHHHcCceEEEEEcCCh-----------------hhhHHHHHHHHHCCCc-ccCC-CcccCeEEEEc
Confidence 999998763 2 3588886431 2334555667778884 3332 22236899999
Q ss_pred cCCCCCHHHHHHHHHHHHHHH
Q 048643 475 GATLTEERHVMVAWTMVQEQL 495 (506)
Q Consensus 475 ~~~~tt~edi~~li~~l~~~~ 495 (506)
. +.+|++||++|+++|+++.
T Consensus 335 ~-~~nt~edi~~l~~al~~~~ 354 (355)
T cd00611 335 Y-NALSLEGVQALADFMKEFQ 354 (355)
T ss_pred c-CCCCHHHHHHHHHHHHHHh
Confidence 5 6677889999999999863
No 70
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.86 E-value=8.1e-19 Score=179.49 Aligned_cols=338 Identities=12% Similarity=0.081 Sum_probs=204.4
Q ss_pred CCCCCCCCccccCCCCCCHHHHHHHHHHhhcCCC---CcccccCh---hhHHHHHHHHHHHHHHcCCCCccccCCCCcEE
Q 048643 87 VTHWQSPNYFAYFPSSGSIAGFLGEMLSSGFNVV---GFNWISSP---AATELENIVMDWLGQMLKLPKSFLFSGNGGGV 160 (506)
Q Consensus 87 ~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~---~~~~~~~p---~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~ 160 (506)
..+|.+-.|+|+-..+ .....+.+.+..+..+. +.....+. ....+-.++.+.+++++|.+. .+
T Consensus 6 ~~~~~s~~YL~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~~~---------~l 75 (370)
T PRK05937 6 SIDFVTNDFLGFSRSD-TLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGAPE---------AF 75 (370)
T ss_pred eEEeECCCccCCCCCH-HHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhCCCe---------EE
Confidence 3456777899986443 33333444444443221 11111222 245566667788999999853 35
Q ss_pred EcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHH
Q 048643 161 IQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQI 240 (506)
Q Consensus 161 ~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i 240 (506)
+.++|+.+|+. +..+.. + ++..|+++...|.|+..+++.+.- ..+.++ ..|+++|+++|
T Consensus 76 ~~~sG~~a~~~-~~~~~~----~------~~d~ii~d~~~H~sv~~~~~~~~~---~~~~~~-------~~d~~~l~~~l 134 (370)
T PRK05937 76 IVPSGYMANLG-LCAHLS----S------VTDYVLWDEQVHISVVYSLSVISG---WHQSFR-------HNDLDHLESLL 134 (370)
T ss_pred EECChHHHHHH-HHHHhC----C------CCCEEEEEhhhhHHHHHHHHHcCC---ceEEec-------CCCHHHHHHHH
Confidence 55666778853 222211 0 456788889999999999887642 333332 56899999999
Q ss_pred HHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecccccccccCccchhhh--cCCCCCCeeEEcCccc
Q 048643 241 NLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFI--DGVEGADSFSLNAHKW 318 (506)
Q Consensus 241 ~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~--~gi~~aDsi~~~~hK~ 318 (506)
++..+.+....+|+++..++++|.+.|+++|+++|+++|+++|||+||+.+.+..+. +... .+....+.+..+++|.
T Consensus 135 ~~~~~~~~~~~~v~v~~v~s~~G~i~pl~eI~~l~~~~~~~livDea~~~G~~g~~g-~g~~~~~~~~~~~~~~~tlsK~ 213 (370)
T PRK05937 135 ESCRQRSFGRIFIFVCSVYSFKGTLAPLEQIIALSKKYHAHLIVDEAHAMGIFGDDG-KGFCHSLGYENFYAVLVTYSKA 213 (370)
T ss_pred HhhhccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCC-CchHHhhCCCCCcEEEEechhh
Confidence 865433233456777889999999999999999999999999999999865443321 1111 1222334556777898
Q ss_pred cCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHH
Q 048643 319 FFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNM 398 (506)
Q Consensus 319 l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~ 398 (506)
++ |.|+++++.++ ..........+|.... + ........+..++..+-.++ ....++..++
T Consensus 214 ~g-~~G~~vl~~~~--~~~~~~~~~~~~~~s~-------------~---~~~~~~~a~~aal~~l~~~~-~~~~~~l~~l 273 (370)
T PRK05937 214 LG-SMGAALLSSSE--VKQDLMLNSPPLRYST-------------G---LPPHLLISIQVAYDFLSQEG-ELARKQLFRL 273 (370)
T ss_pred hh-cCceEEEcCHH--HHHHHHHhCCCCeecC-------------C---CCHHHHHHHHHHHHHHHhCc-HHHHHHHHHH
Confidence 76 56777665433 1111111112232211 0 01112233445555554444 3456778888
Q ss_pred HHHHHHHHHcCCCCcc-ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCC
Q 048643 399 AKLFERLVASDKRVSP-SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGAT 477 (506)
Q Consensus 399 a~~l~~~l~~~~~~~p-~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~ 477 (506)
.++|.+.|.... + ..+.|.+... ..+.+.+.|.++|+ +++........++|+++ +.
T Consensus 274 ~~~l~~~l~~~~---~~~~~~i~~~~~------------------~~~~~~~~L~~~gi-~v~~~~~~~~~~iRis~-~~ 330 (370)
T PRK05937 274 KEYFAQKFSSAA---PGCVQPIFLPGI------------------SEQELYSKLVETGI-RVGVVCFPTGPFLRVNL-HA 330 (370)
T ss_pred HHHHHHhcCCCC---CCCEEEEEeCCh------------------hHHHHHHHHHHCCe-eEEeeCCCCCCEEEEEc-CC
Confidence 888888876431 1 2334444321 13466777777786 45533223345799999 57
Q ss_pred CCCHHHHHHHHHHHHHHHHHHH
Q 048643 478 LTEERHVMVAWTMVQEQLEAFL 499 (506)
Q Consensus 478 ~tt~edi~~li~~l~~~~~~l~ 499 (506)
.+|++||+++++.|+++.+++.
T Consensus 331 ~~t~edid~l~~~L~~~~~~~~ 352 (370)
T PRK05937 331 FNTEDEVDILVSVLATYLEKYQ 352 (370)
T ss_pred CCCHHHHHHHHHHHHHHHHHhC
Confidence 7888899999999999887653
No 71
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.86 E-value=1.9e-19 Score=200.28 Aligned_cols=288 Identities=13% Similarity=0.001 Sum_probs=183.2
Q ss_pred CccccCCCCCCHHHHHHHHHHhhc-----CCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHH
Q 048643 94 NYFAYFPSSGSIAGFLGEMLSSGF-----NVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEA 168 (506)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~l~~~~-----n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a 168 (506)
.||.+--+++..+..+.+++..++ |.. ..+..+..++.+-.++++.+++++|.+... -..+||+|+|+|
T Consensus 36 iYLD~Aatt~~~~~~V~~~~~~~~~~~~~np~-s~~~~s~~~~~~~e~aR~~ia~~lga~~~~-----~~VvFtsnaT~a 109 (805)
T PLN02724 36 VYLDHAGATLYSESQLEAALADFSSNVYGNPH-SQSDSSMRSSDTIESARQQVLEYFNAPPSD-----YACVFTSGATAA 109 (805)
T ss_pred EeEeCCCCCCCCHHHHHHHHHHHHhhccCCCC-cCcchhhhHHHHHHHHHHHHHHHhCCCccc-----eEEEEeCChHHH
Confidence 577776555545555555554332 222 223345556777788999999999996531 046999999999
Q ss_pred HHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHH---HHHhCCCCCCeEEEecCCC------CCcccCH--HHHH
Q 048643 169 ILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKA---AQIVGIDLKNFRAIKTTKS------SSYGLSP--DSLL 237 (506)
Q Consensus 169 ~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka---~~~~G~g~~~v~~v~~~~~------~~~~~d~--~~L~ 237 (506)
+..+..... +. ++..|+++...|.|+... ++..|+ +++.+|++.. +.+.+++ ++|+
T Consensus 110 lnlva~~l~--------~~--~gd~Iv~t~~eH~svl~~~~~a~~~G~---~v~~v~~~~~~~~~~~~~g~~~~~~~~l~ 176 (805)
T PLN02724 110 LKLVGETFP--------WS--SESHFCYTLENHNSVLGIREYALEKGA---AAIAVDIEEAANQPTNSQGSVVVKSRGLQ 176 (805)
T ss_pred HHHHHHHCC--------CC--CCCeEEEeeccccchHHHHHHHHHcCC---eEEeccchhccccccccccccccchhhhh
Confidence 765433221 01 445677788899876643 334487 8999988621 1234544 6677
Q ss_pred HHHHHHH----hcCCccEEEEEeccCCCCCcccChhHHHHHHHHh-------C-CEEEeecccccccccCccchhhhcCC
Q 048643 238 TQINLDV----EAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQF-------G-IWVHVDAAYAGSACICPEFQHFIDGV 305 (506)
Q Consensus 238 ~~i~~~~----~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~-------g-~~lhVDaA~gg~~~~~~~~~~~~~gi 305 (506)
+.+++.. ..+..+.+|++++.+|.+|.+.|+++|..+++.. | ++++||||++.+....+-- ..
T Consensus 177 ~~~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~g~~piDv~-~~---- 251 (805)
T PLN02724 177 RRNTSKLQKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGCGTSPPDLS-RY---- 251 (805)
T ss_pred hhhhhhhccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhcCCCCCChh-hc----
Confidence 6653111 1122345899999999999999999876655532 3 5799999998888776532 11
Q ss_pred CCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCcccc---CC-C---ccCCCCccccCC-CCC-CchHH
Q 048643 306 EGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATE---SK-Q---VVDYKDWQITLS-RRF-RSLKL 376 (506)
Q Consensus 306 ~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~---~~-~---~~~~~~~~~~~s-r~~-~al~~ 376 (506)
++|.+++++|||++.|.|+|++++|++.. . .+ .+.|....... .. . ........++.+ ..+ ..+.+
T Consensus 252 -~~Dfl~~S~HK~~GgP~G~G~L~vr~~~~-~-~l--~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l 326 (805)
T PLN02724 252 -PADFVVVSFYKIFGYPTGLGALLVRRDAA-K-LL--KKKYFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAAL 326 (805)
T ss_pred -CCCEEEEecceeccCCCCceEEEEehhhh-h-hh--cCCccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHHH
Confidence 79999999999999999999999996432 1 12 23333221100 00 0 000001122222 222 23566
Q ss_pred HHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCC
Q 048643 377 WLVIRNYGVANLRHFLRSHVNMAKLFERLVASDK 410 (506)
Q Consensus 377 ~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~ 410 (506)
-.+++.+-.-|++++.++...+++++.+.|++++
T Consensus 327 ~aal~~l~~ig~~~I~~~~~~L~~~l~~~L~~l~ 360 (805)
T PLN02724 327 RHGFKLLNRLTISAIAMHTWALTHYVANSLRNLK 360 (805)
T ss_pred HHHHHHHHHhChHHHHHHHHHHHHHHHHHHHhcc
Confidence 6777777666788888999999999999999875
No 72
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.85 E-value=2.5e-19 Score=183.96 Aligned_cols=321 Identities=12% Similarity=0.064 Sum_probs=206.1
Q ss_pred cccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHH-----HHhhc-----------cc
Q 048643 124 WISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRV-----LNKIG-----------RE 187 (506)
Q Consensus 124 ~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~-----~~~~~-----------~~ 187 (506)
|.......++|..+.+...++||.+.. -+=.-+|+.||+.++.+..... +.+-| |+
T Consensus 87 y~g~~~~d~ie~l~~~ra~~lf~a~~a--------nvqp~Sg~~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~ 158 (493)
T PRK13580 87 YAGCQNVDTVEWEAAEHAKELFGAEHA--------YVQPHSGADANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWE 158 (493)
T ss_pred cCCCchHHHHHHHHHHHHHHHhCCCcc--------cccCCCcHHHHHHHHHHHhcccccCcchhccccccccccchhhhh
Confidence 334456789999999999999998753 2444578999998888776431 11111 00
Q ss_pred ----CCCCeEEEe---CCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCC
Q 048643 188 ----NISKLVVYG---SDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTT 260 (506)
Q Consensus 188 ----~~~~~~v~~---s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt 260 (506)
-..+..|+. +.-.|.+........|.. .+++..+++++ ++.+|++++++.+.+.+ | .|+++..++
T Consensus 159 ~~~~~~~gd~i~~l~l~~GGHlthg~~~n~~~~~-~~~~~y~vd~~-~g~iD~d~l~~~~~~~~-----p-lvii~g~S~ 230 (493)
T PRK13580 159 ALRAELGNQRLLGMSLDSGGHLTHGFRPNISGKM-FHQRSYGVDPD-TGLLDYDEIAALAREFK-----P-LILVAGYSA 230 (493)
T ss_pred hhhccCCCCEEEeecCCCCCeeecCcccchhhhe-eeeEecccCcc-cCccCHHHHHHHHhhcC-----C-EEEEeCccc
Confidence 001233332 233454443333334421 15666777643 57999999999998754 3 466666666
Q ss_pred CCCcccChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhh
Q 048643 261 AITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSL 340 (506)
Q Consensus 261 ~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~ 340 (506)
. |.+.|+++|+++|++||++++||+||+.+.+..............+|.+++++||+|..|.| |++++++. +.+.+
T Consensus 231 ~-~~~~dl~~i~eia~~~gA~L~VD~AH~~Gligg~~~~~~~~~~~~~D~vtgT~hKaL~GP~G-G~I~~~~~--l~~~L 306 (493)
T PRK13580 231 Y-PRRVNFAKLREIADEVGAVLMVDMAHFAGLVAGKVFTGDEDPVPHADIVTTTTHKTLRGPRG-GLVLAKKE--YADAV 306 (493)
T ss_pred c-CCCcCHHHHHHHHHHcCCEEEEECchhhceeccccchhhcCCCCCCcEEEeCChhhccCCCe-EEEEecHH--HHHHH
Confidence 6 55779999999999999999999999988775433221122235899999999999988885 77777643 22333
Q ss_pred cCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc------c
Q 048643 341 STNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS------P 414 (506)
Q Consensus 341 ~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~------p 414 (506)
....+|+..... .....++-.+++..-...++++.++..+++++|++.|.+. ||. .
T Consensus 307 ~~a~P~i~gg~l-----------------~p~iAA~avAl~e~~~~ef~~y~~~l~~Na~~La~~L~~~-G~~vv~ggTd 368 (493)
T PRK13580 307 DKGCPLVLGGPL-----------------PHVMAAKAVALAEARTPEFQKYAQQVVDNARALAEGFLKR-GARLVTGGTD 368 (493)
T ss_pred hhCCCcccCCCc-----------------cHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHhc-CCCccCCCCC
Confidence 222345543210 0111222234444434456778899999999999999887 665 2
Q ss_pred -ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEE---eeeeECC---EEEEEEEecCCC---CCHHHH
Q 048643 415 -SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYM---THAVCGG---IYAMRFAVGATL---TEERHV 484 (506)
Q Consensus 415 -~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~---~~~~~~g---~~~lR~~~~~~~---tt~edi 484 (506)
.+|.+.+.+. +.....+.+.|.+.|+..- .|++..+ ...||+++.... .+++||
T Consensus 369 shIV~V~lg~~----------------~~~g~~a~~~L~e~GI~vn~i~~Ptvp~g~~~~srLRIg~~A~ttrg~teedi 432 (493)
T PRK13580 369 NHLVLIDVTSF----------------GLTGRQAESALLDAGIVTNRNSIPSDPNGAWYTSGIRLGTPALTTLGMGSDEM 432 (493)
T ss_pred CCEEEEEeCCH----------------HHHHHHHHHHHHHCCeEEccccCCCCCCCCCCCceEEeccchhhhcCCCHHHH
Confidence 7777776442 1122355667777887421 2444455 678999985322 258899
Q ss_pred HHHHHHHHHHHHHH
Q 048643 485 MVAWTMVQEQLEAF 498 (506)
Q Consensus 485 ~~li~~l~~~~~~l 498 (506)
+++.+.|.++.+..
T Consensus 433 ~~iad~l~~~l~~~ 446 (493)
T PRK13580 433 DEVAELIVKVLSNT 446 (493)
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999887654
No 73
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=99.85 E-value=1.1e-19 Score=183.27 Aligned_cols=363 Identities=13% Similarity=0.097 Sum_probs=191.9
Q ss_pred CCChhHHhhhCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCccccCCCCCCHHHHHHH-------HHHhhcCCCCcc
Q 048643 51 QVEPGYLRKRLPECAPYNPESMETILQDVQEHIVPGVTHWQSPNYFAYFPSSGSIAGFLGE-------MLSSGFNVVGFN 123 (506)
Q Consensus 51 ~~~p~~l~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~-------~l~~~~n~~~~~ 123 (506)
..-|++++..-+..+|+. .|+.++++++.+....|.. ...|+|-=...--.|+.+-+ |++++ .+++..
T Consensus 29 ~~IP~~i~~~~~~~lp~~-~sE~e~~r~~~~la~kN~~---~~~fiG~G~y~~~~P~~i~~~i~~~~ef~TaY-tPYQpE 103 (429)
T PF02347_consen 29 SDIPEEIRLKKPLNLPEP-LSEYELLRHLERLASKNKS---YTSFIGAGSYTHYVPAVIDRNILSRPEFYTAY-TPYQPE 103 (429)
T ss_dssp TTS-GGG-SS-----------HHHHHHHHHHHHTTS-----TTS---CTTT-----HHHHH-HHCCHHCCCS--STTSGG
T ss_pred hhCCHhhcCCCCCCCCCC-CCHHHHHHHHHHHHhcCCC---CCccccccccCceeChhhcCccccChhhhccC-CCCCcH
Confidence 345777876667778874 7999999999998776655 44566522222234444444 33332 233333
Q ss_pred cccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchH
Q 048643 124 WISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCA 203 (506)
Q Consensus 124 ~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s 203 (506)
-.++.....+|.+ .+++++.|++.. +..+..++|.+--.++++.|.. ++ ++..|+++...|+.
T Consensus 104 isQG~Lq~lfe~Q--s~i~eLTGmdva-------NaSlyd~atA~aEa~~ma~r~~--~~------~~~~vlv~~~~hP~ 166 (429)
T PF02347_consen 104 ISQGRLQALFEYQ--SMICELTGMDVA-------NASLYDGATAAAEAMLMAVRAT--KR------KRNKVLVPESLHPQ 166 (429)
T ss_dssp GBHHHHHHHHHHH--HHHHHHHTSSEE--------SEBSSCCHHHHHHHHHHHHHH--TT---------EEEEETTS-CH
T ss_pred HHHHHHHHHHHHH--HHHHHhhCCCcc-------CCCCCChhHHHHHHHHHHHHhc--cc------CCcEEEEcCCcChh
Confidence 3455566667666 999999999975 4567777774443333333332 10 23478899999998
Q ss_pred HHHHHHH----hCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhC
Q 048643 204 LQKAAQI----VGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFG 279 (506)
Q Consensus 204 ~~ka~~~----~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g 279 (506)
....++. .|+ +++.+|.+++ +..| .+ ....|+++.++ ..|.++++++|++++|++|
T Consensus 167 ~~~v~~t~a~~~g~---~iv~~~~~~~--~~~d--------~~------~~a~v~vq~Pn-~~G~~ed~~~i~~~~h~~g 226 (429)
T PF02347_consen 167 TRAVLRTYAAPLGI---EIVEVPLDED--GTTD--------DD------DTAAVMVQNPN-TFGVFEDIKEIADIAHAAG 226 (429)
T ss_dssp HHHHHHHHCCHCCE---EEEEE-BBTT--CSB---------ST------TEEEEEEESS--TTSB--THHHHHHHHHHTT
T ss_pred hHHHHHHhhhhCCe---EEEEeccccc--CCcc--------cc------CeEEEEeecCC-CCceEeeHHHHHHHHHHcC
Confidence 8876554 466 8888988753 4666 22 34577888775 6799999999999999999
Q ss_pred CEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCC-----cceEEEEeCchhHHhhhcCCccccCCccccC
Q 048643 280 IWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTL-----DCCCLWVKDPSALVSSLSTNPEYLKNKATES 354 (506)
Q Consensus 280 ~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~-----~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~ 354 (506)
..+++ ++---........... +||.+ +.-||.|+.|. ++|++.+|+. +.+ ..|..+.....+.
T Consensus 227 al~~~-~ad~~aL~~l~~Pge~-----GADI~-vg~~Q~fg~p~~~GGP~~G~~a~~~~--l~r---~lPGRiVG~t~D~ 294 (429)
T PF02347_consen 227 ALVIV-GADPNALGGLKSPGEY-----GADIV-VGEHQTFGIPMGFGGPGAGFFAVRED--LVR---QLPGRIVGQTKDA 294 (429)
T ss_dssp -EEEE-CGGCCGCCTC--GGGG-----T-SEE-EECCTTTT---CCC-S--EEEEE-GG--GGG---GS-S-EEEEEEBC
T ss_pred CEEEE-ecCHHHHhCcCChhhc-----CccEE-eeCCCCCcccCCCCCCCeeeEEEhhh--hhh---hCCCceecccccc
Confidence 99987 6654433333222332 89999 55599998884 4778888875 222 2344443221111
Q ss_pred CCccCCCCcccc----CCCCC------------CchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c-
Q 048643 355 KQVVDYKDWQIT----LSRRF------------RSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS---P- 414 (506)
Q Consensus 355 ~~~~~~~~~~~~----~sr~~------------~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p- 414 (506)
.+...+. .+++ .-||- -++..++++..+|.+|++++.+++..+|+|++++|++..++. +
T Consensus 295 ~G~~~~~-ltLqtREQHIrReKAtSNIctnqaL~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~~~~~~~~~~ 373 (429)
T PF02347_consen 295 DGKRAFV-LTLQTREQHIRREKATSNICTNQALLALAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKKIYGLPFDNPF 373 (429)
T ss_dssp CCSCCEE-EE-GGGTCHHHGCCSTT---SS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTBECSSSSS
T ss_pred cccceee-eccccccccccccchhhhhhhhHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCCCC
Confidence 2221111 1111 11221 224677888999999999999999999999999999973333 2
Q ss_pred --ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHH
Q 048643 415 --SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMV 491 (506)
Q Consensus 415 --~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l 491 (506)
..|.... +. ... .++.++....| +.. .... ...+-+|++ ..+|++|||++++++
T Consensus 374 f~e~v~~~~-~~----------------~~~-~~l~~~~~~~g-l~~--~~~~-~~~~li~~T-E~~t~edid~lv~~f 429 (429)
T PF02347_consen 374 FFEFVVVFS-KD----------------KEV-EELLKRGIEGG-LNL--RYPD-DGALLICVT-ETRTKEDIDRLVEAF 429 (429)
T ss_dssp BSSEEEEES-S-----------------HHH-HHHHHTT-----EEE--GGG--SSEEEEE---TT--HHHHHHHHH--
T ss_pred ceeeeeecC-Cc----------------HHH-HHHHHHHHhcC-CCc--cccC-CCeEEEEcc-CCCCHHHHHHHHhcC
Confidence 2222221 11 122 23666666666 222 2222 227889986 567778999999864
No 74
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.85 E-value=1.1e-18 Score=193.27 Aligned_cols=358 Identities=10% Similarity=0.026 Sum_probs=224.1
Q ss_pred hhHHhhhCCCCCCC--CCCCHHHHHHHHHHHhcCCCCCCCCCCccccCCCCCCHHHHH-------HHHHHhhcCCCCccc
Q 048643 54 PGYLRKRLPECAPY--NPESMETILQDVQEHIVPGVTHWQSPNYFAYFPSSGSIAGFL-------GEMLSSGFNVVGFNW 124 (506)
Q Consensus 54 p~~l~~~~~~~~p~--~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-------~~~l~~~~n~~~~~~ 124 (506)
|..++.. +.++|. .+.++.++++++.+....|.. +..|.|--+-+.-+|+.+ .++++++ .++....
T Consensus 68 P~~i~~~-~l~lp~~~~~~sE~e~~~~~~~la~kN~~---~~~fiG~G~y~~~~P~~v~~~i~~~~~~~Tay-tPYqaEi 142 (993)
T PLN02414 68 PKSIRLD-SMKLSKYDEGLTESQMLEHMKSLASKNKV---FKSYIGMGYYNTHVPPVILRNILENPGWYTQY-TPYQAEI 142 (993)
T ss_pred CHHHhcC-CCCCCCCCCCCCHHHHHHHHHHHHhcCCc---cccccCCCCCCccCCHHHHHHHHhChHHHhhc-CCCchHH
Confidence 5555433 567772 478999999999987666543 334444211111233333 2333432 2222211
Q ss_pred ccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHH
Q 048643 125 ISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCAL 204 (506)
Q Consensus 125 ~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~ 204 (506)
.++.....+| ...++++|+|++.+ +..++.++|.+.-.++++ ... . .+ ++..|++++..|++.
T Consensus 143 sQG~lqal~~--~Qt~ia~LtG~~~a-------naSL~d~aTAaaea~~~a-~~~--~----~g-~~~~VlVs~~~hP~~ 205 (993)
T PLN02414 143 AQGRLESLLN--YQTMITDLTGLPMS-------NASLLDEGTAAAEAMAMC-NNI--L----KG-KKKKFLIASNCHPQT 205 (993)
T ss_pred HHHHHHHHHH--HHHHHHHHhCCChh-------hEeecCChHHHHHHHHHH-Hhc--c----cC-CCCEEEEcCccCHhH
Confidence 1333444444 44999999999976 788999988766544433 321 0 01 346789999999987
Q ss_pred HHHH----HHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCC
Q 048643 205 QKAA----QIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGI 280 (506)
Q Consensus 205 ~ka~----~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~ 280 (506)
...+ +..|+ +|+.+|.+. .+ ...+ .. +.+.++-++.+|.+.|+++|+++||++|+
T Consensus 206 ~~v~~t~a~~~Gi---eV~~v~~~~-----~~------~~~~------~v-~~vlvq~P~~~G~v~dv~~I~~~ah~~Ga 264 (993)
T PLN02414 206 IDVCQTRADGLGL---EVVVADEKD-----FD------YSSG------DV-CGVLVQYPATDGEVLDYAEFVKNAHANGV 264 (993)
T ss_pred HHHHHHhhhhcCC---EEEEecchh-----hc------cccC------ce-EEEEEecCCCCeEEcCHHHHHHHHHHcCC
Confidence 6555 44588 899998752 11 0111 12 23345566789999999999999999999
Q ss_pred EEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCc-----ceEEEEeCchhHHhhhcCCcc-ccCCccccC
Q 048643 281 WVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLD-----CCCLWVKDPSALVSSLSTNPE-YLKNKATES 354 (506)
Q Consensus 281 ~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~-----~g~~~~r~~~~l~~~~~~~~~-yl~~~~~~~ 354 (506)
+++| +|...+.......... +||.++.++|||+ +|.+ +|++++|++. .+ ..|+ .+... .+.
T Consensus 265 L~iV-aad~lal~~l~~pge~-----GADi~vgsgqKwg-~P~G~GGP~aGflavr~~~--~r---~~PgriVG~s-~d~ 331 (993)
T PLN02414 265 KVVM-ATDLLALTMLKPPGEW-----GADIVVGSAQRFG-VPMGYGGPHAAFLATSQEY--KR---LMPGRIIGVS-VDS 331 (993)
T ss_pred EEEE-EECHHHhcCCCCHhhc-----cCcEEEECCCccc-cCCCCCCCCeeEEEECHHH--Hh---hCCCcccCcc-cCC
Confidence 9999 8877666555322222 8999999999998 4444 8999998753 22 2232 33221 111
Q ss_pred CCccCCC---CccccCCCCCC-------chHHHHHH-----HHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc----c-
Q 048643 355 KQVVDYK---DWQITLSRRFR-------SLKLWLVI-----RNYGVANLRHFLRSHVNMAKLFERLVASDKRVS----P- 414 (506)
Q Consensus 355 ~~~~~~~---~~~~~~sr~~~-------al~~~~~l-----~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~----p- 414 (506)
.+...+. ....+..||-. ..++++.+ ..+|..|++++.++..+++++++++|++. +++ |
T Consensus 332 ~g~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~L~~~-G~~~~~~~~ 410 (993)
T PLN02414 332 SGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAGLKKL-GFQVQSLPF 410 (993)
T ss_pred CCCcccccccccccchhhhcccccchhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhhc-CCccCCCCC
Confidence 1111110 01112223311 12444444 35688999999999999999999999875 677 3
Q ss_pred -ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHH
Q 048643 415 -SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQE 493 (506)
Q Consensus 415 -~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~ 493 (506)
.+|+|++. . ..++.++|.++|+. +.... ...+|+|+ +..+|++|||+|+++|..
T Consensus 411 f~~vt~~~~-~-------------------~~~v~~~L~~~gI~-l~~~~---~~~lrvs~-~e~~T~edId~L~~~l~~ 465 (993)
T PLN02414 411 FDTVKVKCS-D-------------------ADAIADAAAKVGIN-LRVVD---ANTVTVSF-DETTTLEDVDKLFKVFAG 465 (993)
T ss_pred cCeEEEecC-C-------------------HHHHHHHHHHCCCe-eEEec---CCeEEEEe-eccCCHHHHHHHHHHHcc
Confidence 78888863 2 25677777778873 33211 24699999 577888899999999964
No 75
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.84 E-value=2.5e-18 Score=157.97 Aligned_cols=296 Identities=16% Similarity=0.132 Sum_probs=218.0
Q ss_pred HHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCe
Q 048643 139 DWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGIDLKNF 218 (506)
Q Consensus 139 ~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v 218 (506)
+-+++.+|++. .-+|.|+-++-+.+|.+... +++.|++...+||+..-||...|+ +|
T Consensus 68 ~dlaeFlg~D~---------~R~t~GARe~KfavMhal~~-----------~gd~vV~D~~aHYttyvAAEragl---~v 124 (382)
T COG1103 68 EDLAEFLGMDE---------VRVTAGAREAKFAVMHALCK-----------EGDWVVVDSLAHYTTYVAAERAGL---NV 124 (382)
T ss_pred HHHHHHhCCce---------eeecccchhhHHHHHHHhcc-----------CCCEEEEcCcchHHHHHHHHhcCC---eE
Confidence 34899999974 47889999999887776554 567788899999999999999999 99
Q ss_pred EEEecCCCCCcccCHHHHHHHHHHHHhcC-CccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecccccccccCcc
Q 048643 219 RAIKTTKSSSYGLSPDSLLTQINLDVEAG-LVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPE 297 (506)
Q Consensus 219 ~~v~~~~~~~~~~d~~~L~~~i~~~~~~g-~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~ 297 (506)
..||....-.+.+++|...+.|++-.+++ ..|.+.++|+.....|.+.|.+.+++||++||+++.+.+||..+-+....
T Consensus 125 ~eVp~tg~Pey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~Dakkva~ic~e~gvPlllN~AYt~Grmpvs~ 204 (382)
T COG1103 125 AEVPNTGYPEYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLADAKKVAKICREYGVPLLLNCAYTVGRMPVSG 204 (382)
T ss_pred EecCCCCCCceEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCchhhHHHHHHHHHcCCceEeecceeeccccccc
Confidence 99997544468999999999999887765 67899999999999999999999999999999999999999887766532
Q ss_pred chhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCccccCCCCCCc-hHH
Q 048643 298 FQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRS-LKL 376 (506)
Q Consensus 298 ~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~a-l~~ 376 (506)
+.. ++|.|+.++||.+.+..+||++-++..-. ...+..+..+....+ .. -+.|+-|... ..+
T Consensus 205 -ke~-----g~DFiVgSGHKsmAAs~PiGvl~~~eE~a-e~V~r~Sg~~~~~KE------ve----llGCT~rGapivTl 267 (382)
T COG1103 205 -KEI-----GADFIVGSGHKSMAASAPIGVLAMSEEWA-EIVLRRSGRAFPKKE------VE----LLGCTVRGAPIVTL 267 (382)
T ss_pred -ccc-----CCCEEEecCccchhccCCeeEEeehhHHH-HHHHhhcccccccce------ee----eecccccCchHHHH
Confidence 222 89999999999999989999998876422 223333322222111 11 2345533222 223
Q ss_pred HHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc-----c---ceEEEeecCCCcccccccccchHHHHHHHH----
Q 048643 377 WLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS-----P---SAVMDKLKPKYENCHSQQLVTEEEAINEFN---- 444 (506)
Q Consensus 377 ~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~-----p---~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~---- 444 (506)
.+++-.. .+. -++++...+.+++|.+.|+++.|++ | ..+-|....- +++.
T Consensus 268 mASfP~V-~eR-VkrWdeEv~kaR~fv~elEkigg~~qlG~rPk~HdLm~Fetp~f----------------~eIakk~~ 329 (382)
T COG1103 268 MASFPHV-VER-VKRWDEEVEKARWFVAELEKIGGVKQLGERPKNHDLMKFETPVF----------------HEIAKKHK 329 (382)
T ss_pred HhcCHHH-HHH-HHHHHHHHHHHHHHHHHHHHhhhHHHhCCCCcccceeeecCchH----------------HHHHHhCc
Confidence 3333222 233 2456777889999999999998787 6 5555543221 2222
Q ss_pred ---HHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 048643 445 ---RELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEA 497 (506)
Q Consensus 445 ---~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~ 497 (506)
-.|++.|.++|+.-+.++ -..++++++ +-.+.|+++..++++++++++
T Consensus 330 r~gyFlY~ELK~RgI~GI~~G---~Tk~~K~sv--yGl~~Eqve~V~~afkeI~ek 380 (382)
T COG1103 330 RKGYFLYEELKKRGIHGIQPG---QTKYFKLSV--YGLSWEQVEYVVDAFKEIAEK 380 (382)
T ss_pred CCceeeHHHHHhcCccccccC---ceeEEEEEe--ecCCHHHHHHHHHHHHHHHHh
Confidence 246777888887544443 246899998 667888999999999999875
No 76
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.84 E-value=6.2e-20 Score=181.72 Aligned_cols=228 Identities=12% Similarity=0.070 Sum_probs=156.1
Q ss_pred HHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCC
Q 048643 135 NIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGID 214 (506)
Q Consensus 135 ~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g 214 (506)
+++.+.+++++|.+.. .++++|+|+++..++.+... ++..|+++..+|.|+..++...|.
T Consensus 62 ~~~~~~~A~~~ga~~~--------~~~~~Gst~a~~~~l~al~~-----------~gd~Vlv~~~~h~s~~~~~~~~g~- 121 (294)
T cd00615 62 KEAQELAARAFGAKHT--------FFLVNGTSSSNKAVILAVCG-----------PGDKILIDRNCHKSVINGLVLSGA- 121 (294)
T ss_pred HHHHHHHHHHhCCCCE--------EEEcCcHHHHHHHHHHHcCC-----------CCCEEEEeCCchHHHHHHHHHCCC-
Confidence 3444678889997643 35588888999877766533 667888999999999999999998
Q ss_pred CCCeEEEecCCCCC----cccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeeccccc
Q 048643 215 LKNFRAIKTTKSSS----YGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAG 290 (506)
Q Consensus 215 ~~~v~~v~~~~~~~----~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg 290 (506)
+++.++.+.+++ +.+|++.|++++++.. .+.+|+++.+ |++|.+.|+++|+++|+++|++++||+||++
T Consensus 122 --~~~~v~~~~~~~~~~~~~i~~~~l~~~l~~~~----~~k~v~l~~p-~~~G~~~dl~~I~~~~~~~g~~livDeA~~~ 194 (294)
T cd00615 122 --VPVYLKPERNPYYGIAGGIPPETFKKALIEHP----DAKAAVITNP-TYYGICYNLRKIVEEAHHRGLPVLVDEAHGA 194 (294)
T ss_pred --EEEEecCccCcccCcCCCCCHHHHHHHHHhCC----CceEEEEECC-CCCCEecCHHHHHHHHHhcCCeEEEECcchh
Confidence 899988764332 4799999999997532 2457777776 6899999999999999999999999999987
Q ss_pred ccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCccccCCCC
Q 048643 291 SACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRR 370 (506)
Q Consensus 291 ~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~ 370 (506)
.+.+.+....... ..++|.++.++||++..+.++|++++++.......+.... ++... .+..
T Consensus 195 ~~~~~~~~~~~~~-~~~~div~~S~hK~l~g~~~~~~l~~~~~~~~~~~~~~~~-~~~~t----------------tsps 256 (294)
T cd00615 195 HFRFHPILPSSAA-MAGADIVVQSTHKTLPALTQGSMIHVKGDLVNPDRVNEAL-NLHQS----------------TSPS 256 (294)
T ss_pred hhccCcccCcchh-hcCCcEEEEchhcccchHhHHHHHHhCCCcCCHHHHHHHH-HHHCC----------------CCcH
Confidence 6554443222111 1279999999999998888888888876521111111100 01000 0111
Q ss_pred CC-chHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHc
Q 048643 371 FR-SLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVAS 408 (506)
Q Consensus 371 ~~-al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~ 408 (506)
.. ...+-.+++.+..+| .+.+++..+++++++++|.+
T Consensus 257 ~~~~asl~~a~~~~~~~g-~~~~~~~~~~~~~~r~~l~~ 294 (294)
T cd00615 257 YLILASLDVARAMMALEG-KELVEELIELALYARQEINK 294 (294)
T ss_pred HHHHHHHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHHhC
Confidence 11 122233344443344 44678888899999988763
No 77
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.84 E-value=2.1e-18 Score=168.55 Aligned_cols=381 Identities=14% Similarity=0.123 Sum_probs=242.0
Q ss_pred CCCCCCCHHHHHHHHHHHhcCCCCCCCCCCccccCCCCCCHHHHHHHHHHhhcCC--CCc---ccccChhhHHHHHHHHH
Q 048643 65 APYNPESMETILQDVQEHIVPGVTHWQSPNYFAYFPSSGSIAGFLGEMLSSGFNV--VGF---NWISSPAATELENIVMD 139 (506)
Q Consensus 65 ~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~--~~~---~~~~~p~~~~lE~~~~~ 139 (506)
+|....|+.++++.+.++-..+..-.....-+|- +.-.+-. ..++....+.. +.+ .-++..+.-++-.++.+
T Consensus 40 ~~~Pe~SE~e~~Rh~~rLs~kn~avd~~m~PLGS--CTMK~Np-~~e~~~~~~p~f~~iHP~~pe~~vqG~l~li~~Lq~ 116 (496)
T COG1003 40 PPLPEHSETEMVRHYTRLSQKDLAVDRGMIPLGS--CTMKLNP-KAEMKPATWPEFANIHPFQPEEQVQGYLELIYELQE 116 (496)
T ss_pred CCCccccHHHHHHHHHHHHhcccccccCccCCcc--cccccCc-hhhcccccccchhhcCCCCChHHHHHHHHHHHHHHH
Confidence 3333368999999998865544433333322331 0000000 11222222210 111 12233466788888999
Q ss_pred HHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeE
Q 048643 140 WLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGIDLKNFR 219 (506)
Q Consensus 140 ~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~ 219 (506)
||+++.|++.- .+=-..|++.-+++|++.|.....+ |.. .+.++++++.+|-.....|.+.|+ +|+
T Consensus 117 ~L~~ITG~Dav--------sLQP~AGAqGE~aGll~Ir~YHe~r-G~~--~R~~~LIP~SAHGTNPASAam~G~---~VV 182 (496)
T COG1003 117 WLKEITGMDAV--------SLQPNAGAQGEYAGLLAIRAYHESR-GEG--HRNICLIPDSAHGTNPASAAMAGF---KVV 182 (496)
T ss_pred HHHHhcCCcee--------eccCCCCcchhhHHHHHHHHHHHHc-CCC--cCcEEEeeccccCCChhhHhhcCc---eEE
Confidence 99999999852 2333467888899999988765332 221 678899999999999999999999 999
Q ss_pred EEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc-cChhHHHHHHHHhCCEEEeecccccccccCccc
Q 048643 220 AIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV-DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEF 298 (506)
Q Consensus 220 ~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i-dpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~ 298 (506)
.|++++ +|.+|+++|++++.++++ .+.+|.++| .|.+ .+|.+|++|.|++|..+..|||---..+-.-..
T Consensus 183 ~V~~~~--~G~VDlddLk~k~~~~~A------alMiTnPsT-~GvFE~~I~ei~~ivH~~Gg~vY~DGANlNA~vG~~rP 253 (496)
T COG1003 183 VVKCDE--NGNVDLDDLRAKAEDNLA------ALMITNPST-LGVFEEDIREICEIVHEAGGQVYYDGANLNAIVGLARP 253 (496)
T ss_pred EEecCC--CCCccHHHHHHHhcccee------EEEeccCcc-cccchhhHHHHHHHHHHcCCEEEecCcchhhhhccccc
Confidence 999986 579999999999997665 688888865 4777 579999999999999999999863222211111
Q ss_pred hhhhcCCCCCCeeEEcCccccCCCCc-----ceEEEEeCchhHHhhhcCCccccCCcc--ccCCC-ccCC-CCccccCCC
Q 048643 299 QHFIDGVEGADSFSLNAHKWFFTTLD-----CCCLWVKDPSALVSSLSTNPEYLKNKA--TESKQ-VVDY-KDWQITLSR 369 (506)
Q Consensus 299 ~~~~~gi~~aDsi~~~~hK~l~~p~~-----~g~~~~r~~~~l~~~~~~~~~yl~~~~--~~~~~-~~~~-~~~~~~~sr 369 (506)
|-=++|.+.+|.||+|..|-| .|.+.|+. .+. +|+.... .+... ..++ ..+++.-++
T Consensus 254 -----Gd~G~DV~HlNLHKTF~iPHGGGGPG~GPvgVk~--~L~-------pfLP~p~~~~~~~~y~~~~~~~~s~g~~~ 319 (496)
T COG1003 254 -----GDMGFDVVHLNLHKTFCIPHGGGGPGAGPVGVKA--HLA-------PFLPGPVVYHDVGEYRLDYDGKKSIGVSA 319 (496)
T ss_pred -----cccccceEEeecccccccCCCCCCCCCCceehHh--hcc-------ccCCCCcccCCCccccccCCCCccceeec
Confidence 112899999999999998844 56677763 222 3333210 00000 0010 011222222
Q ss_pred C-C---Cc-hHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc-c--------ceEEEeecCCCcccccccccc
Q 048643 370 R-F---RS-LKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS-P--------SAVMDKLKPKYENCHSQQLVT 435 (506)
Q Consensus 370 ~-~---~a-l~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~-p--------~~v~f~~~~~~~~~~~~~~~~ 435 (506)
. + .. ...|++++.+|.+|+++.-+..+-+|+|++.+|+.. |+ | ..+.+...+-.
T Consensus 320 a~~Gs~~il~~a~~YI~~mG~~GL~~ase~AvLNANYia~rL~~~--y~~~y~~~~~~~HE~ild~r~l~---------- 387 (496)
T COG1003 320 APYGSASILPIAWAYIRMMGADGLKQASEVAVLNANYIARRLKGY--YPVPYTGENRVAHECILDARPLK---------- 387 (496)
T ss_pred cccCcchHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHhhhc--CccccCCCCcceeEEEeechHhH----------
Confidence 2 1 11 578999999999999999999999999999999873 44 2 22333332210
Q ss_pred hHHHHHHHHHHHHHHHHhcCcEEEeeeeECC---EEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHccC
Q 048643 436 EEEAINEFNRELLESINASGKAYMTHAVCGG---IYAMRFAVGATLTEERHVMVAWTMVQEQLEAFLTTN 502 (506)
Q Consensus 436 ~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g---~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l~~~~ 502 (506)
+........+.++|+.-|. -.||.... ...+-+=.+ ..-+++++|++++++.+++++..+.+
T Consensus 388 --~~~Gv~~~DvAKrLlD~Gf--HaPT~~FPliV~~tLMIEPT-EsEsk~eLDrf~dami~I~~Ea~~~~ 452 (496)
T COG1003 388 --KETGVRALDVAKRLLDYGF--HAPTMYFPLIVAGTLMIEPT-ESESKEELDRFIDAMIAIREEADAVP 452 (496)
T ss_pred --hhcCCcHHHHHHHHHhcCC--CCCcccCccccccceeecCC-CCCCHHHHHHHHHHHHHHHHHHHhcc
Confidence 0111224566777777786 33443211 234444443 33456899999999999999887654
No 78
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.84 E-value=1.2e-18 Score=177.30 Aligned_cols=313 Identities=14% Similarity=0.102 Sum_probs=191.0
Q ss_pred HHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhh
Q 048643 105 IAGFLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKI 184 (506)
Q Consensus 105 ~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~ 184 (506)
++..+.+.+..+.+. |. ....+.+++.+++++++|.+ ..++|+|+|+|+..++.+....
T Consensus 25 ~~~~v~~a~~~~~~~----~~---~~~~~~~~~~~~~a~~~g~~---------~~~~~~g~t~al~~al~al~~~----- 83 (363)
T TIGR01437 25 VSDEVADAQKRGAQN----YF---EIKELVNKTGEYIANLLGVE---------DAVIVSSASAGIAQSVAAVITR----- 83 (363)
T ss_pred CCHHHHHHHHHHHhc----CC---CHHHHHHHHHHHHHHhhCCC---------eEEEEcCHHHHHHHHHHHHhcC-----
Confidence 444555555544432 11 13466778889999999975 4689999999999888876431
Q ss_pred ccc---------CCCCeEEEeCCCCchH-----HHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCcc
Q 048643 185 GRE---------NISKLVVYGSDQTHCA-----LQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVP 250 (506)
Q Consensus 185 ~~~---------~~~~~~v~~s~~~H~s-----~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p 250 (506)
|.+ ..++..|+++. .|+. +..++.+.|. +++.++++ +.+|+++|+++|.+.++
T Consensus 84 Gd~~~~~~~~~s~~~~~eVi~~~-~~~~~~~~~~~~~~~~~g~---~~v~v~~~----~~~d~~~le~ai~~~t~----- 150 (363)
T TIGR01437 84 GNRYLVENLHDSKIEVNEVVLPK-GHNVDYGAPVETMVRLGGG---KVVEAGYA----NECSAEQLEAAITEKTA----- 150 (363)
T ss_pred CCcchhhcccccccccceEEEEC-ccchhcCCchHHHHHhcCC---eEEEEcCC----CCCCHHHHHHhcChhce-----
Confidence 110 00223566665 4543 3466778888 88888763 47999999999987664
Q ss_pred EEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEE
Q 048643 251 LFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWV 330 (506)
Q Consensus 251 ~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~ 330 (506)
.+++++.+++++|.+-|+++|+++|++||+++|+|+||+... ..... + ++|.+++++||++..|. .|+++.
T Consensus 151 ai~~v~~~~~~~g~~~~~~~i~~~a~~~gi~vivD~a~~~~~------~~~~~-~-g~D~~~~S~~K~l~gp~-~G~l~~ 221 (363)
T TIGR01437 151 AILYIKSHHCVQKSMLSVEDAAQVAQEHNLPLIVDAAAEEDL------QKYYR-L-GADLVIYSGAKAIEGPT-SGLVLG 221 (363)
T ss_pred EEEEEecCCCCcCCcCCHHHHHHHHHHcCCeEEEECCCCCch------HHHHH-c-CCCEEEEeCCcccCCCc-eEEEEE
Confidence 234456677889999999999999999999999999997211 11111 1 58999999999999887 777665
Q ss_pred eCchhHHhhhcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCC
Q 048643 331 KDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDK 410 (506)
Q Consensus 331 r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~ 410 (506)
+ +..+.. ... +.... .. .++.+. ...+.+..++..+-..+. +.+++..+.++++.++|+++|
T Consensus 222 ~-~~~i~~-~~~---~~~~~----~~-------~~~~~~-~~~~gl~aAl~~~~~~~~-~~~~~~~~~~~~l~~~L~~i~ 283 (363)
T TIGR01437 222 K-KKYIEW-VKL---QSKGI----GR-------AMKVGK-ENILGLTAALEQYLSTGK-ESGAEMVAKLTPFIEALNTLK 283 (363)
T ss_pred c-HHHHHH-HHh---ccCCC----cc-------eeccCH-HHHHHHHHHHHHHHccCc-ccHHHHHHHHHHHHHHHhcCC
Confidence 4 333321 110 10000 00 000000 012455556655432222 333344456778999999998
Q ss_pred CCc---c----c----eEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCC
Q 048643 411 RVS---P----S----AVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLT 479 (506)
Q Consensus 411 ~~~---p----~----~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t 479 (506)
+++ + . ...+.+.... .+....++.+.|.+.+...+........+.+|+... ..
T Consensus 284 g~~~~~~~~~~~~~~~~~~v~~~~~~--------------~g~~~~~l~~~L~~~~~~I~~r~~~~~~~~~~l~~~--~~ 347 (363)
T TIGR01437 284 GVSASIVQDEAGRDIARAEIRFDESE--------------LGMTAADVVQALRQGEPAIYTRGYKANEGIIEIDPR--SV 347 (363)
T ss_pred CeEEEEecCCCCCcCceEEEEEeccC--------------CCCCHHHHHHHHhcCCCCEEEeeeeecCCeEEEEee--cC
Confidence 886 1 0 1222222110 001135677777666642233322334456777774 25
Q ss_pred CHHHHHHHHHHHHHH
Q 048643 480 EERHVMVAWTMVQEQ 494 (506)
Q Consensus 480 t~edi~~li~~l~~~ 494 (506)
+++|++.++++|.++
T Consensus 348 ~~~e~~~~~~~l~~~ 362 (363)
T TIGR01437 348 TGGQLDIIVERIREI 362 (363)
T ss_pred CHHHHHHHHHHHHHh
Confidence 688999999999875
No 79
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.84 E-value=3.9e-18 Score=176.17 Aligned_cols=298 Identities=12% Similarity=0.050 Sum_probs=194.5
Q ss_pred hhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHH
Q 048643 129 AATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAA 208 (506)
Q Consensus 129 ~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~ 208 (506)
+...+..++.+++++++|.+. ..++|+ |++++..++.+..+ ++..|++++..|+++..++
T Consensus 84 G~~~l~~~l~~~la~~~g~~~--------~i~~ts-G~~a~~~~~~~l~~-----------~gd~vi~~~~~~~~~~~~~ 143 (397)
T PRK06939 84 GTQDLHKELEEKLAKFLGTED--------AILYSS-CFDANGGLFETLLG-----------KEDAIISDALNHASIIDGV 143 (397)
T ss_pred CCcHHHHHHHHHHHHHhCCCc--------EEEEcC-hHHHHHHHHHHhCC-----------CCCEEEEEhhhhHHHHHHH
Confidence 346777888899999999652 345555 58888766544322 5678888999999999999
Q ss_pred HHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeeccc
Q 048643 209 QIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAY 288 (506)
Q Consensus 209 ~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~ 288 (506)
+.+|. +++.++. +|+++|++++++....+.++.+|+.....+++|.++++++|+++|++||+|+++|++|
T Consensus 144 ~~~~~---~~~~~~~-------~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~~~~~l~~la~~~~~~li~De~~ 213 (397)
T PRK06939 144 RLCKA---KRYRYAN-------NDMADLEAQLKEAKEAGARHKLIATDGVFSMDGDIAPLPEICDLADKYDALVMVDDSH 213 (397)
T ss_pred HhcCC---ceEEeCC-------CCHHHHHHHHHhhhccCCCCeEEEEecCcCCCCCcCCHHHHHHHHHHhCCEEEEECcc
Confidence 99988 7777653 5889999998764333334566776667788999999999999999999999999999
Q ss_pred ccccccCc-cchhhhcCC-CCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcC-CccccCCccccCCCccCCCCccc
Q 048643 289 AGSACICP-EFQHFIDGV-EGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLST-NPEYLKNKATESKQVVDYKDWQI 365 (506)
Q Consensus 289 gg~~~~~~-~~~~~~~gi-~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~ 365 (506)
+.++...+ .......++ ...|.++.++||+++.+ ..|+++.+. ... +.+.. ..+|..
T Consensus 214 ~~g~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~g~-r~G~v~~~~-~~~-~~l~~~~~~~~~----------------- 273 (397)
T PRK06939 214 AVGFVGENGRGTVEHFGVMDRVDIITGTLGKALGGA-SGGYTAGRK-EVI-DWLRQRSRPYLF----------------- 273 (397)
T ss_pred cccCcCCCCCCHHHHcCCCCCCcEEEEECHHHhCcc-CceEEEeCH-HHH-HHHHHhCccccc-----------------
Confidence 63332111 101111222 35788999999999655 467777653 322 33321 111111
Q ss_pred cCCCC-CCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c--ceEEEeecCCCcccccccccchHHH
Q 048643 366 TLSRR-FRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS---P--SAVMDKLKPKYENCHSQQLVTEEEA 439 (506)
Q Consensus 366 ~~sr~-~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p--~~v~f~~~~~~~~~~~~~~~~~~~~ 439 (506)
.++.. .....+..+++.+. + ..++.++..++++++.+.|++. +++ | .++.+...+.
T Consensus 274 ~~~~~~~~~~a~~~al~~~~-~-~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~--------------- 335 (397)
T PRK06939 274 SNSLAPAIVAASIKVLELLE-E-SDELRDRLWENARYFREGMTAA-GFTLGPGEHPIIPVMLGDA--------------- 335 (397)
T ss_pred cCCCCHHHHHHHHHHHHHHh-c-CHHHHHHHHHHHHHHHHHHHHc-CCCcCCCCCCEEEEEECCH---------------
Confidence 11111 01123334444432 1 2466778888999999999887 565 3 4443333211
Q ss_pred HHHHHHHHHHHHHhcCcEEEeeeeE----CCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 048643 440 INEFNRELLESINASGKAYMTHAVC----GGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAF 498 (506)
Q Consensus 440 ~~~~~~~l~~~l~~~g~~~~~~~~~----~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l 498 (506)
....++.+.|.++|+... +..+ .+..++|+++. ...++++|+++++.|+++.+++
T Consensus 336 --~~~~~~~~~L~~~gI~v~-~~~~~~~~~~~~~iRi~~~-~~~~~~~i~~~l~~L~~~~~~~ 394 (397)
T PRK06939 336 --KLAQEFADRLLEEGVYVI-GFSFPVVPKGQARIRTQMS-AAHTKEQLDRAIDAFEKVGKEL 394 (397)
T ss_pred --HHHHHHHHHHHHCCceEe-eeCCCCCCCCCceEEEEEC-CCCCHHHHHHHHHHHHHHHHHh
Confidence 123567788888887544 3322 23468999984 4456789999999999987765
No 80
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.84 E-value=6.1e-19 Score=182.63 Aligned_cols=332 Identities=13% Similarity=0.095 Sum_probs=201.3
Q ss_pred ccccCCCCCCHHHHHHHHHHhhcC-CC------CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchH
Q 048643 95 YFAYFPSSGSIAGFLGEMLSSGFN-VV------GFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCE 167 (506)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~l~~~~n-~~------~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~ 167 (506)
++.+.++....+..+.+.+...+. .. ...+...+...++|+.+.+++++++|.+.. .++++|||+
T Consensus 21 ~~~~~~~~~~~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~--------~v~~~sgt~ 92 (402)
T cd00378 21 TLELIASENFTSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAEYA--------NVQPHSGSQ 92 (402)
T ss_pred CeeeeccCCcCCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCCce--------eeecCCcHH
Confidence 556666655444444454544331 11 122334556678888888999999998753 345456788
Q ss_pred HHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHH-----HHHhCCCCCCeEEEecCCC-CCcccCHHHHHHHHH
Q 048643 168 AILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKA-----AQIVGIDLKNFRAIKTTKS-SSYGLSPDSLLTQIN 241 (506)
Q Consensus 168 a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka-----~~~~G~g~~~v~~v~~~~~-~~~~~d~~~L~~~i~ 241 (506)
|+..++.+... ++..|+++...|.+.... ++..|. +++.++++.+ +++.+|+++|++++.
T Consensus 93 a~~~~l~~l~~-----------~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~id~~~l~~~i~ 158 (402)
T cd00378 93 ANLAVYFALLE-----------PGDTIMGLDLSHGGHLTHGSFTKVSASGK---LFESVPYGVDPETGLIDYDALEKMAL 158 (402)
T ss_pred HHHHHHHHhcC-----------CCCEEEEecCccCccccccccccccccce---eEEEecCCcCcccCCcCHHHHHHHHH
Confidence 98877766532 556777777777544322 555676 7777777543 257999999999986
Q ss_pred HHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCC
Q 048643 242 LDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFT 321 (506)
Q Consensus 242 ~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~ 321 (506)
+. .+.+|+.+.+ .+|...|+++|+++|++||+++++|++|..+.......... +..+|.++.++|||+..
T Consensus 159 ~~-----~~~~v~~~~~--~~~~~~~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~---~~~~dv~~~s~sK~l~G 228 (402)
T cd00378 159 EF-----KPKLIVAGAS--AYPRPIDFKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNP---LPGADVVTTTTHKTLRG 228 (402)
T ss_pred hC-----CCCEEEecCc--ccCCCcCHHHHHHHHHhcCCEEEEEccchhhhhhcccCCCc---ccCCcEEEeccccCCCC
Confidence 42 1335555544 34677899999999999999999999975444322111111 12578899999999966
Q ss_pred CCcceEEEEeCchhHHhhhcC-CccccCCccccCCCccCCCCccccCCCC-CCchHHHHHHHHhchhHHHHHHHHHHHHH
Q 048643 322 TLDCCCLWVKDPSALVSSLST-NPEYLKNKATESKQVVDYKDWQITLSRR-FRSLKLWLVIRNYGVANLRHFLRSHVNMA 399 (506)
Q Consensus 322 p~~~g~~~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~l~~~G~~g~~~~i~~~~~~a 399 (506)
|. +|+++++++... +.+.. ..++... +.. .....+..++......++.++.++..+++
T Consensus 229 ~~-gg~i~~~~~~~~-~~l~~~~~~~~~~------------------~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~ 288 (402)
T cd00378 229 PR-GGLILTRKGELA-KKINSAVFPGLQG------------------GPHLHVIAAKAVALKEALEPEFKAYAKQVVENA 288 (402)
T ss_pred CC-ceEEEeccHHHH-HHHHHHhCccccC------------------CchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 65 455555553332 22211 1111110 000 01112222333332336677888899999
Q ss_pred HHHHHHHHcCCCCc----c---ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEee----eeE---C
Q 048643 400 KLFERLVASDKRVS----P---SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTH----AVC---G 465 (506)
Q Consensus 400 ~~l~~~l~~~~~~~----p---~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~----~~~---~ 465 (506)
+++.+.|.+. +|+ | +.+.+++.+.+. ...++.+.+.+.|+. +.+ ... .
T Consensus 289 ~~l~~~L~~~-g~~~~~~~~~~~~v~v~~~~~~~----------------~~~~~~~~l~~~gI~-v~~~~~p~~~~~~~ 350 (402)
T cd00378 289 KALAEALKER-GFKVVSGGTDNHLVLVDLRPKGI----------------TGKAAEDALEEAGIT-VNKNTLPWDPSSPF 350 (402)
T ss_pred HHHHHHHHhC-CCeEeecCCCCeEEEEeCCccCC----------------CHHHHHHHHHHcCcE-EcCCcCCCCCCCCC
Confidence 9999999987 665 3 555566543210 013344556666764 322 111 1
Q ss_pred CEEEEEEEecCC---CCCHHHHHHHHHHHHHHHH
Q 048643 466 GIYAMRFAVGAT---LTEERHVMVAWTMVQEQLE 496 (506)
Q Consensus 466 g~~~lR~~~~~~---~tt~edi~~li~~l~~~~~ 496 (506)
+...+|++++.. ..+++||+.+++.|+++.+
T Consensus 351 ~~~~lRi~~~~~~~~~~~~~di~~~~~~l~~~~~ 384 (402)
T cd00378 351 VPSGIRIGTPAMTTRGMGEEEMEEIADFIARALK 384 (402)
T ss_pred CCCeeEecCHHHHHhCCCHHHHHHHHHHHHHHHh
Confidence 346899988532 2368899999999998653
No 81
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.83 E-value=1.2e-19 Score=168.69 Aligned_cols=299 Identities=15% Similarity=0.157 Sum_probs=202.8
Q ss_pred cccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCc
Q 048643 122 FNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTH 201 (506)
Q Consensus 122 ~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H 201 (506)
..|...|-...||+.+ |+++|-+ .|+|.++||++|+.++++.... ++-.|++.+.+|
T Consensus 50 dVyGeD~tt~rLE~~v----A~l~GKE---------AgLFv~SGTmgNllaIm~Hc~~----------rg~eii~gd~~H 106 (384)
T KOG1368|consen 50 DVYGEDPTTNRLEQRV----AELFGKE---------AGLFVPSGTMGNLLAIMVHCHQ----------RGSEIIVGDRAH 106 (384)
T ss_pred ccccCCccHHHHHHHH----HHHhCcc---------ceeeecccccccHHHHHHHhcC----------CCceEEeccchh
Confidence 4677889899999875 5555543 5799999999999999988774 677899999999
Q ss_pred hHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHH-h-cCCccEEEEEeccCCCCC-cccCh---hHHHHHH
Q 048643 202 CALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDV-E-AGLVPLFLCATIGTTAIT-AVDPL---KPLCDVA 275 (506)
Q Consensus 202 ~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~-~-~g~~p~~Vv~t~gtt~tG-~idpl---~~I~~ia 275 (506)
.-.++...+.-++.-.+++|... +++.||++++|++|+... . .+...-+|++..-.+++| .+-|| ++|.++|
T Consensus 107 I~~~E~gg~s~l~gv~~~tv~~e--~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~~v~~la 184 (384)
T KOG1368|consen 107 IHRYEQGGISQLAGVHVRTVKNE--NDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEELDRVKALA 184 (384)
T ss_pred eeehhccChhhhccceeEeeeeC--CCCeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHHHHHHHHH
Confidence 87777654443433377777655 367999999999998532 1 122234677776666666 77675 5667789
Q ss_pred HHhCCEEEeeccccccc---ccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccc
Q 048643 276 KQFGIWVHVDAAYAGSA---CICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKAT 352 (506)
Q Consensus 276 ~~~g~~lhVDaA~gg~~---~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~ 352 (506)
+++|+.||+|||.-..+ +-+| .+... +.+||+++...|.+++|.|+ ++|.++..+.++ .+++.
T Consensus 185 k~~glkLH~DGARi~NAavasgV~-vk~i~---~~fDSVsiCLSKglgAPVGS--ViVG~k~FI~kA-----~~~RK--- 250 (384)
T KOG1368|consen 185 KRHGLKLHMDGARIFNAAVASGVP-VKKIC---SAFDSVSICLSKGLGAPVGS--VIVGSKDFIDKA-----RHFRK--- 250 (384)
T ss_pred hccCCeeecchhhhhhHHHHcCCC-HHHHH---HhhhhhhhhhhccCCCCccc--EEEccHHHHHHH-----HHHHH---
Confidence 99999999999853222 1122 12222 37999999999999999765 555555433322 22221
Q ss_pred cCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c----ceEEEeecCCC
Q 048643 353 ESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS---P----SAVMDKLKPKY 425 (506)
Q Consensus 353 ~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p----~~v~f~~~~~~ 425 (506)
++.++-|....-.-++|-.+. +.+. .+++-.+.|+.+++.+.+.++++ | +++...+....
T Consensus 251 -----------alGGGmRQsGvLaaaaLval~-~~~~-~L~~dHk~A~~lAe~~~~~~~i~v~v~a~etNiv~~~l~q~~ 317 (384)
T KOG1368|consen 251 -----------ALGGGMRQSGVLAAAALVALD-ENVP-LLRADHKRAKELAEYINTPEEIRVEVPAVETNIVNMVLCQAR 317 (384)
T ss_pred -----------HhcCchhHHHHHHHHHHHHhh-cchH-HHHHHHHHHHHHHHHhccccceeeecchhhcceeeeeccccc
Confidence 223443333322223333332 2233 67778889999999999887777 4 67666554331
Q ss_pred cccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHH
Q 048643 426 ENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQE 493 (506)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~ 493 (506)
-..+.+++++.+.|+..+.... ..+|+++ ++..|.++++.+++.+.+
T Consensus 318 ----------------~~~~~l~~~~~k~gi~lm~~~s----~r~Rivl-h~Qvt~~~ve~~~~~~~k 364 (384)
T KOG1368|consen 318 ----------------LTAEELCKFLEKNGILLMGGAS----RRIRIVL-HHQVTDEDVEYVKSVLSK 364 (384)
T ss_pred ----------------CCHHHHHHHHHHCCeEEeeccc----cceEEEE-EEecCHHHHHHHHHHHHH
Confidence 1246788888899987766543 3489998 688888999999999953
No 82
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.83 E-value=2e-18 Score=175.34 Aligned_cols=301 Identities=15% Similarity=0.133 Sum_probs=191.9
Q ss_pred ccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHH
Q 048643 125 ISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCAL 204 (506)
Q Consensus 125 ~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~ 204 (506)
..+|...++|+ .+++++|.+ ..+++++||+|+..++.+.+.. ++..|+++..+|.+.
T Consensus 15 ~~~~~~~~~~~----~la~~~~~~---------~~~~~~sgt~al~~~l~~l~~~----------~gd~vl~~~~~~~~~ 71 (352)
T cd00616 15 TLGPKVREFEK----AFAEYLGVK---------YAVAVSSGTAALHLALRALGIG----------PGDEVIVPSFTFVAT 71 (352)
T ss_pred cCCHHHHHHHH----HHHHHhCCC---------eEEEECCHHHHHHHHHHHcCCC----------CCCEEEeCCcchHHH
Confidence 34565666665 567777753 4688889999988887765311 566789999999999
Q ss_pred HHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEe
Q 048643 205 QKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHV 284 (506)
Q Consensus 205 ~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhV 284 (506)
..++...|+ +++.+++++ +++.+|+++|++++++.+ .+|+++ +++|.+.|+++|.++|+++|+++++
T Consensus 72 ~~~~~~~g~---~~~~~~~~~-~~~~~d~~~l~~~i~~~~------~~v~~~---~~~G~~~~~~~i~~l~~~~~i~li~ 138 (352)
T cd00616 72 ANAILLLGA---TPVFVDIDP-DTYNIDPELIEAAITPRT------KAIIPV---HLYGNPADMDAIMAIAKRHGLPVIE 138 (352)
T ss_pred HHHHHHcCC---eEEEEecCC-CcCCcCHHHHHHhcCcCC------eEEEEE---CCCCCcCCHHHHHHHHHHcCCeEEE
Confidence 999999999 999999875 257999999999885432 356555 3689999999999999999999999
Q ss_pred ecccccccccCccchhhhcCCCCCCeeEEc--CccccCCCCcceEEEEeCchhHHhhhcC-CccccCCccccCCCccCCC
Q 048643 285 DAAYAGSACICPEFQHFIDGVEGADSFSLN--AHKWFFTTLDCCCLWVKDPSALVSSLST-NPEYLKNKATESKQVVDYK 361 (506)
Q Consensus 285 DaA~gg~~~~~~~~~~~~~gi~~aDsi~~~--~hK~l~~p~~~g~~~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~ 361 (506)
|+||+.+...... .+.. ..|..+++ .|||+..+ ..|++++++++...+.-.. ...+.... ..+.
T Consensus 139 D~a~~~g~~~~~~---~~~~--~~d~~~~S~~~~K~~~~~-~gg~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~ 205 (352)
T cd00616 139 DAAQALGATYKGR---KVGT--FGDAGAFSFHPTKNLTTG-EGGAVVTNDEELAERARLLRNHGRDRDR-------FKYE 205 (352)
T ss_pred ECCCCCCCeECCE---Eccc--CcceeEEcCCCCCCCccc-CceEEEECCHHHHHHHHHHHHcCCCCCC-------Cccc
Confidence 9999755443221 0111 23545555 56999544 3466777765443221100 00010000 0000
Q ss_pred CccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c--------ceEEEeecCCCccccc
Q 048643 362 DWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS---P--------SAVMDKLKPKYENCHS 430 (506)
Q Consensus 362 ~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p--------~~v~f~~~~~~~~~~~ 430 (506)
.......-+...+.....+. ..+++.++.++..++++++.+.|+++++++ + .+++|++.+..
T Consensus 206 ~~~~~~~~~~~~~~aa~~~~--~l~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~----- 278 (352)
T cd00616 206 HEILGYNYRLSEIQAAIGLA--QLEKLDEIIARRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDPEA----- 278 (352)
T ss_pred cceeeeccCcCHHHHHHHHH--HHHhhHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceeeEEEEEEECCcC-----
Confidence 00111111222333333332 456778888999999999999999988877 1 35777765310
Q ss_pred ccccchHHHHHHHHHHHHHHHHhcCcEE---EeeeeEC--------------------CEEEEEEEecCCCCCHHHHHHH
Q 048643 431 QQLVTEEEAINEFNRELLESINASGKAY---MTHAVCG--------------------GIYAMRFAVGATLTEERHVMVA 487 (506)
Q Consensus 431 ~~~~~~~~~~~~~~~~l~~~l~~~g~~~---~~~~~~~--------------------g~~~lR~~~~~~~tt~edi~~l 487 (506)
.....++.+.|.++|+.. ..+.... ....+|+++ ++.+|++||+++
T Consensus 279 ----------~~~~~~v~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~l~~-~~~~t~~di~~i 347 (352)
T cd00616 279 ----------GESRDELIEALKEAGIETRVHYPPLHHQPPYKKLLGYPPGDLPNAEDLAERVLSLPL-HPSLTEEEIDRV 347 (352)
T ss_pred ----------CCCHHHHHHHHHHCCCCeeeecCccccCHhhhhccCCCcCCChHHHHHHhCeEEccC-CCCCCHHHHHHH
Confidence 011345666666677621 1111110 025899998 678889999999
Q ss_pred HHHHH
Q 048643 488 WTMVQ 492 (506)
Q Consensus 488 i~~l~ 492 (506)
+++|+
T Consensus 348 ~~~l~ 352 (352)
T cd00616 348 IEALR 352 (352)
T ss_pred HHHhC
Confidence 98874
No 83
>PLN02483 serine palmitoyltransferase
Probab=99.83 E-value=1.6e-17 Score=174.97 Aligned_cols=337 Identities=13% Similarity=0.072 Sum_probs=207.3
Q ss_pred CCCCCCCCccccCCCCCCHHHHHHHHHHhhcCCCCc---ccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcC
Q 048643 87 VTHWQSPNYFAYFPSSGSIAGFLGEMLSSGFNVVGF---NWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQG 163 (506)
Q Consensus 87 ~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~---~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ 163 (506)
..++.+-.|+|+-...+..+..+.+.+..+-..... .+...+...++| +.+++++|.++ .++.+
T Consensus 102 ~~n~~s~~YLgl~~~~~~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele----~~lA~~~g~~~---------ai~~~ 168 (489)
T PLN02483 102 CLNLGSYNYLGFAAADEYCTPRVIESLKKYSASTCSSRVDGGTTKLHRELE----ELVARFVGKPA---------AIVFG 168 (489)
T ss_pred EEEeecCCccCcCCCCHHHHHHHHHHHHHhCCCCCccccccCCcHHHHHHH----HHHHHHhCCCc---------EEEEC
Confidence 345677789998644444445555555554211111 123334444444 55777777543 35556
Q ss_pred CchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHH
Q 048643 164 TTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLD 243 (506)
Q Consensus 164 ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~ 243 (506)
+|+.+|+.++.+... ++..|++++..|.|+..+++..|+ +++.++.+ |+++|++.+++.
T Consensus 169 ~G~~an~~~i~al~~-----------~Gd~Vi~d~~~h~s~~~~~~~~Ga---~v~~~~~~-------d~~~le~~l~~~ 227 (489)
T PLN02483 169 MGYATNSTIIPALIG-----------KGGLIISDSLNHNSIVNGARGSGA---TIRVFQHN-------TPSHLEEVLREQ 227 (489)
T ss_pred CHHHHHHHHHHHhCC-----------CCCEEEEcchhhHHHHHHHHHcCC---eEEEEeCC-------CHHHHHHHHHhh
Confidence 677788765554322 567888999999999999999999 99999853 567888877654
Q ss_pred HhcC-------CccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecccccccccCccchhh--hcCC--CCCCeeE
Q 048643 244 VEAG-------LVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHF--IDGV--EGADSFS 312 (506)
Q Consensus 244 ~~~g-------~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~--~~gi--~~aDsi~ 312 (506)
...+ ....+|+.....+++|.+.++++|+++|++||+++++|+||+.+.. .+..+.. ..++ ...|.+.
T Consensus 228 i~~~~p~t~~p~~k~livve~v~s~~G~~~~l~~I~~la~~~~~~livDEa~s~g~~-G~~G~g~~~~~~v~~~~~dI~~ 306 (489)
T PLN02483 228 IAEGQPRTHRPWKKIIVIVEGIYSMEGELCKLPEIVAVCKKYKAYVYLDEAHSIGAV-GKTGRGVCELLGVDPADVDIMM 306 (489)
T ss_pred hhccccccccCCceEEEEECCCCCCCCcccCHHHHHHHHHHcCCEEEEECcCccCcc-CCCCCchHHhcCCCcccCcEEE
Confidence 3221 1123555555668899999999999999999999999999974432 1111110 1122 3678889
Q ss_pred EcCccccCCCCcceEEEEeCchhHHhhhcC-CccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHh----chhH
Q 048643 313 LNAHKWFFTTLDCCCLWVKDPSALVSSLST-NPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNY----GVAN 387 (506)
Q Consensus 313 ~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~----G~~g 387 (506)
.+++|+++.+ .|+++. +++.+ +.+.. ...+.... ..+ ...+..+-.+|+.+ |.+.
T Consensus 307 ~SfSKs~g~~--GG~i~~-~~~li-~~l~~~~~~~~~~~---------------~~~-p~~~~~~~aaL~~l~~~~g~~~ 366 (489)
T PLN02483 307 GTFTKSFGSC--GGYIAG-SKELI-QYLKRTCPAHLYAT---------------SMS-PPAVQQVISAIKVILGEDGTNR 366 (489)
T ss_pred EecchhcccC--ceEEEc-CHHHH-HHHHHhCccccccC---------------CcC-HHHHHHHHHHHHHHHhCccccc
Confidence 9999999864 265553 33333 23321 11111110 000 00111222334332 1233
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCc---c---ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEee
Q 048643 388 LRHFLRSHVNMAKLFERLVASDKRVS---P---SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTH 461 (506)
Q Consensus 388 ~~~~i~~~~~~a~~l~~~l~~~~~~~---p---~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~ 461 (506)
..+++++..+++++|.+.|+++ +++ + .++.+.+... ....++.++|.++|+..+.
T Consensus 367 ~~~~~~~l~~~~~~l~~~L~~~-G~~v~~~~~sp~~~l~l~~~-----------------~~~~~~~~~Ll~~GI~v~~- 427 (489)
T PLN02483 367 GAQKLAQIRENSNFFRSELQKM-GFEVLGDNDSPVMPIMLYNP-----------------AKIPAFSRECLKQNVAVVV- 427 (489)
T ss_pred hHHHHHHHHHHHHHHHHHHHHC-CCcccCCCCCCEEEEEECCH-----------------HHHHHHHHHHHHCCcEEee-
Confidence 4566788999999999999987 665 2 4555544321 1123566777777875543
Q ss_pred ee----ECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 048643 462 AV----CGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAF 498 (506)
Q Consensus 462 ~~----~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l 498 (506)
.. ..+...+|+++. ...+++||+++++.|+++.+.+
T Consensus 428 ~~fp~~p~~~~~vRi~is-a~~t~edId~~l~~L~~~~~~~ 467 (489)
T PLN02483 428 VGFPATPLLLARARICIS-ASHSREDLIKALEVISEVGDLV 467 (489)
T ss_pred eCCCCCCCCCceEEEEeC-CCCCHHHHHHHHHHHHHHHHHh
Confidence 22 223467999995 4456779999999999988765
No 84
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.83 E-value=3.7e-19 Score=180.57 Aligned_cols=329 Identities=13% Similarity=0.002 Sum_probs=212.7
Q ss_pred cCCCCCCHHHHHHHHHHhhc----CCCCccc---ccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcE-EEcCCchHHH
Q 048643 98 YFPSSGSIAGFLGEMLSSGF----NVVGFNW---ISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGG-VIQGTTCEAI 169 (506)
Q Consensus 98 ~~~~~~~~~~~~~~~l~~~~----n~~~~~~---~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g-~~t~ggt~a~ 169 (506)
+.|++...+..+-+.+...+ +...+.+ ..++.+.++-+++.+.+++++|.+.+. .. +++++||.++
T Consensus 7 ~~pGP~~~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~------~v~~~~gsgt~~~ 80 (360)
T PRK05355 7 FSAGPAMLPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELLNIPDNY------KVLFLQGGASLQF 80 (360)
T ss_pred ccCCCCCCCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCc------EEEEEcCCchHHH
Confidence 45666666555555444433 2222222 344556688899999999999986542 34 4446666555
Q ss_pred HHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHH-HHHHHHhcCC
Q 048643 170 LCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLT-QINLDVEAGL 248 (506)
Q Consensus 170 l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~-~i~~~~~~g~ 248 (506)
-.++..... .+.+.++|..+...|.+ .+.++.+|. . ..++.++. .+..+..++++ +|+++
T Consensus 81 Ea~~~nl~~--------~g~~~l~i~~G~fg~r~-~~~a~~~g~---~-~~~~~~~~-~g~~~~~~~~~~~l~~~----- 141 (360)
T PRK05355 81 AMVPMNLLG--------GGKKADYVDTGSWSKKA-IKEAKKYGE---V-NVAASSED-DGFTYIPPLDEWQLSDD----- 141 (360)
T ss_pred HHHHHhcCC--------CCCeEEEEECCHHHHHH-HHHHHHhCC---c-eEEecccc-cCCCCCCChhhccCCCC-----
Confidence 444443222 11234555566666655 667777786 5 55555431 24556555555 56443
Q ss_pred ccEEEEEeccCCCCCccc-ChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceE
Q 048643 249 VPLFLCATIGTTAITAVD-PLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCC 327 (506)
Q Consensus 249 ~p~~Vv~t~gtt~tG~id-pl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~ 327 (506)
+.+|.+++..|.||... |+.+| ||+.++||++.+.+....+-- ..|.+++++||+++ |.|.|+
T Consensus 142 -~~~V~~th~eTstGv~~~~i~~i------~g~l~vVDavss~g~~~idv~--------~~d~~~~ssqK~lg-P~Glg~ 205 (360)
T PRK05355 142 -AAYVHYTSNETIDGTEFHELPDT------GDVPLVADMSSDILSRPIDVS--------KFGLIYAGAQKNIG-PAGLTI 205 (360)
T ss_pred -CCEEEEccCCCcceEecCccccc------CCCcEEEEcCccccCccCCHH--------HccEEEEecccccc-CCceEE
Confidence 44899999999999997 78777 899999999998877766421 34699999999986 999999
Q ss_pred EEEeCchhHHhhhcC-CccccCCccccCCCccCCCCccccCCCC-CCchHHHHHHHHhchh-HHHHHHHHHHHHHHHHHH
Q 048643 328 LWVKDPSALVSSLST-NPEYLKNKATESKQVVDYKDWQITLSRR-FRSLKLWLVIRNYGVA-NLRHFLRSHVNMAKLFER 404 (506)
Q Consensus 328 ~~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~l~~~G~~-g~~~~i~~~~~~a~~l~~ 404 (506)
++++++..- .+.. .+.|+..... .... ....+-+ .....+..+|+.+-.+ |++++.+++.++++++++
T Consensus 206 l~~s~~~l~--~~~~~~~~~~~~~~~---~~~~----~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~ 276 (360)
T PRK05355 206 VIVREDLLG--RALPSIPSMLDYKTH---ADND----SMYNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYD 276 (360)
T ss_pred EEECHHHHh--hcccCCChHHHHHHH---HhcC----CccCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 999976532 1221 1222221100 0000 0112222 2335777888888788 899999999999999999
Q ss_pred HHHcCCCCc----c-----ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEec
Q 048643 405 LVASDKRVS----P-----SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVG 475 (506)
Q Consensus 405 ~l~~~~~~~----p-----~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~ 475 (506)
.|++++.+. | .+++|++... ....++++.+.++|.++ .... ...+.+|+|+.
T Consensus 277 ~l~~~~~~~~~~~~~~rs~~v~sf~~~~~-----------------~~~~~~~~~~~~~Gi~~-~~~~-~~~g~vRiS~~ 337 (360)
T PRK05355 277 AIDSSDFYRNPVAPEDRSRMNVPFTLADE-----------------ELDKKFLAEAKAAGLVG-LKGH-RSVGGMRASIY 337 (360)
T ss_pred HHHhCCCcccCCChhhcCCcEEEEEcCCh-----------------HHHHHHHHHHHHCCCcc-cCCC-CccCcEEEECC
Confidence 999986432 1 4688886431 22355667777888864 3322 22468999995
Q ss_pred CCCCCHHHHHHHHHHHHHHHH
Q 048643 476 ATLTEERHVMVAWTMVQEQLE 496 (506)
Q Consensus 476 ~~~tt~edi~~li~~l~~~~~ 496 (506)
+.+|++||++|+++|+++..
T Consensus 338 -~~nt~eei~~l~~~l~~~~~ 357 (360)
T PRK05355 338 -NAMPLEGVQALVDFMKEFER 357 (360)
T ss_pred -CCCCHHHHHHHHHHHHHHHH
Confidence 56777899999999999754
No 85
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.83 E-value=1.5e-17 Score=172.52 Aligned_cols=337 Identities=12% Similarity=0.074 Sum_probs=210.9
Q ss_pred HHHHHHHHHHhhcCCC-CcccccChhhHHHHHHHHHHHHHHcCCCCccc-cCCCCcEEEcCCchHHHHHHHHHHHHHHHH
Q 048643 105 IAGFLGEMLSSGFNVV-GFNWISSPAATELENIVMDWLGQMLKLPKSFL-FSGNGGGVIQGTTCEAILCTLTAARDRVLN 182 (506)
Q Consensus 105 ~~~~~~~~l~~~~n~~-~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~-~~~~~~g~~t~ggt~a~l~al~~ar~~~~~ 182 (506)
++..+.+.+...++.. ...|....+..++.+.+.+|+.+.++.+...+ .......++|+|+++++..++.+...
T Consensus 51 p~~~~~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~---- 126 (412)
T PTZ00433 51 TPAIQTKALVEAVDSQECNGYPPTVGSPEAREAVATYWRNSFVHKESLKSTIKKDNVVLCSGVSHAILMALTALCD---- 126 (412)
T ss_pred CCHHHHHHHHHHhhcCCCCCCCCCCCcHHHHHHHHHHHHhhccccccccCCCChhhEEEeCChHHHHHHHHHHhcC----
Confidence 4556666666665542 23455444678899999999988664110000 00113789999999998777765533
Q ss_pred hhcccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCC
Q 048643 183 KIGRENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAI 262 (506)
Q Consensus 183 ~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~t 262 (506)
++..|+++..+|..+...++.+|+ +++.+|+++++++.+|+++|++++++. +.+|+++.++|+|
T Consensus 127 -------~gd~vlv~~P~y~~~~~~~~~~g~---~~~~i~~~~~~~~~~d~~~l~~~~~~~------~~~i~~~~p~NPt 190 (412)
T PTZ00433 127 -------EGDNILVPAPGFPHYETVCKAYGI---EMRFYNCRPEKDWEADLDEIRRLVDDR------TKALIMTNPSNPC 190 (412)
T ss_pred -------CCCEEEEccCCcccHHHHHHHcCC---EEEEEecCccccCcCCHHHHHHHhccC------ceEEEEeCCCCCC
Confidence 566788888999999999999999 999999976556899999999887653 3367788999999
Q ss_pred Ccc---cChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCC-CCC-eeEEcCccccC-CCCcceEEEEeCc---
Q 048643 263 TAV---DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVE-GAD-SFSLNAHKWFF-TTLDCCCLWVKDP--- 333 (506)
Q Consensus 263 G~i---dpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~-~aD-si~~~~hK~l~-~p~~~g~~~~r~~--- 333 (506)
|.+ +++++|+++|++||+++++|.+|..+..-...+.. +..+. ..+ .+..++.|.++ ....+|++++.++
T Consensus 191 G~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~-~~~~~~~~~~i~~~SfSK~~~~pGlRlG~~i~~~p~~~ 269 (412)
T PTZ00433 191 GSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGATFTS-VADFDTTVPRVILGGTAKNLVVPGWRLGWLLLVDPHGN 269 (412)
T ss_pred CcccCHHHHHHHHHHHHHcCCeEEEeccccccccCCCCccc-hhhccCCCceEEEccchhhcCCCCeeEEEEEEeCCccc
Confidence 986 45888899999999999999999754321111111 11111 112 34556899985 5577999887432
Q ss_pred -hhHHhhhcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHh--c-hhHHHHHHHHHHHHHHHHHHHHHcC
Q 048643 334 -SALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNY--G-VANLRHFLRSHVNMAKLFERLVASD 409 (506)
Q Consensus 334 -~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--G-~~g~~~~i~~~~~~a~~l~~~l~~~ 409 (506)
..+...+......... . ..+...+....+ + ...+++..++..+..+.+.+.|++.
T Consensus 270 ~~~~~~~~~~~~~~~~~-----------------~----~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~ 328 (412)
T PTZ00433 270 GGDFLDGMKRLGMLVCG-----------------P----CSVVQAALGEALLNTPQEHLEQIVAKLEEGAMVLYNHIGEC 328 (412)
T ss_pred HHHHHHHHHHHhhccCC-----------------C----ChHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 1122222110000000 0 112112222222 1 3456667777888888899999886
Q ss_pred CCCc---c---ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHh-cCcEEEeeeeECCEEEEEEEecCCCCCHH
Q 048643 410 KRVS---P---SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINA-SGKAYMTHAVCGGIYAMRFAVGATLTEER 482 (506)
Q Consensus 410 ~~~~---p---~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~g~~~lR~~~~~~~tt~e 482 (506)
.++. | ..+.+++..... . .. ....++.+.+.+ .|+.+..+..+....++|+++.. .++
T Consensus 329 ~~~~~~~p~gg~f~~~~l~~~~~---------~--~~-~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRis~~~---~~e 393 (412)
T PTZ00433 329 IGLSPTMPRGSMFLMSRLDLEKF---------R--DI-KSDVEFYEKLLEEENVQVLPGEIFHMPGFTRLTISR---PVE 393 (412)
T ss_pred CCCcccCCCeeEEEEEEechhhc---------C--CC-CCHHHHHHHHHHhcCEEEeCccccCCCCeEEEEecC---CHH
Confidence 5665 4 334445432100 0 00 012456667664 57654444334345799999963 477
Q ss_pred HHHHHHHHHHHHHHHH
Q 048643 483 HVMVAWTMVQEQLEAF 498 (506)
Q Consensus 483 di~~li~~l~~~~~~l 498 (506)
++++.++.|.++.++.
T Consensus 394 ~l~~al~~l~~~~~~~ 409 (412)
T PTZ00433 394 VLREAVERIKAFCERH 409 (412)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 8999998888877654
No 86
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.82 E-value=1.4e-17 Score=172.34 Aligned_cols=291 Identities=12% Similarity=0.105 Sum_probs=188.8
Q ss_pred HHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCC
Q 048643 134 ENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGI 213 (506)
Q Consensus 134 E~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~ 213 (506)
..++.+.+++++|.+ ..+++++|++||..++.+++... ++.+|+++...|.++..++...|.
T Consensus 92 ~~~Le~~la~~~g~~---------~~l~~~sG~~an~~ai~~l~~~~---------~~~~v~~~~~~h~s~~~~~~~~g~ 153 (402)
T TIGR01821 92 HVELEAELADLHGKE---------SALVFTSGYVANDATLATLAKII---------PGCVIFSDELNHASMIEGIRHSGA 153 (402)
T ss_pred HHHHHHHHHHHhCCC---------eEEEECchHHHHHHHHHHhhCCC---------CCCEEEEcchHhHHHHHHHHHcCC
Confidence 344556678888753 35777888999998887765320 456777777789999999888887
Q ss_pred CCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecccccccc
Q 048643 214 DLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSAC 293 (506)
Q Consensus 214 g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~ 293 (506)
.++.++ ..|+++|++.++... ...+.+|++..+.+++|.+.|+++|+++|++||+|++||+||+.+.+
T Consensus 154 ---~~~~~~-------~~d~~~l~~~l~~~~--~~~~~~v~~e~~~~~~G~~~~l~~i~~l~~~~~~~livDea~~~G~~ 221 (402)
T TIGR01821 154 ---EKFIFR-------HNDVAHLEKLLQSVD--PNRPKIIAFESVYSMDGDIAPIEEICDLADKYGALTYLDEVHAVGLY 221 (402)
T ss_pred ---eEEEEC-------CCCHHHHHHHHHhcc--CCCCeEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEeCccccccc
Confidence 666654 237888888886431 12356788899999999999999999999999999999999984432
Q ss_pred cCccchhh--hcCC-CCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhc-CCccccCCccccCCCccCCCCccccCCC
Q 048643 294 ICPEFQHF--IDGV-EGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLS-TNPEYLKNKATESKQVVDYKDWQITLSR 369 (506)
Q Consensus 294 ~~~~~~~~--~~gi-~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~-~~~~yl~~~~~~~~~~~~~~~~~~~~sr 369 (506)
.+..... ..++ ...|.+...+.|.++.+. |+++.+ ++. .+.+. ...+|... .+.
T Consensus 222 -g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G--G~i~~~-~~~-~~~l~~~~~~~~~t-----------------~~~ 279 (402)
T TIGR01821 222 -GPRGGGIAERDGLMHRIDIIEGTLAKAFGVVG--GYIAAS-RKL-IDAIRSYAPGFIFT-----------------TSL 279 (402)
T ss_pred -CCCCCccchhccCCCCCeEEEEechhhhccCC--ceeecC-HHH-HHHHHHhCcCceec-----------------CcC
Confidence 1211111 1122 246888788999998643 554443 332 22332 11122111 111
Q ss_pred C-CCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c--ceEEEeecCCCcccccccccchHHHHHHH
Q 048643 370 R-FRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS---P--SAVMDKLKPKYENCHSQQLVTEEEAINEF 443 (506)
Q Consensus 370 ~-~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p--~~v~f~~~~~~~~~~~~~~~~~~~~~~~~ 443 (506)
. .....+..+|+.+... ..+.++..++++++.+.|++. +++ + +++.+.+.. ...
T Consensus 280 ~~~~~aaa~aaL~~~~~~--~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~i~~i~~~~-----------------~~~ 339 (402)
T TIGR01821 280 PPAIAAGATASIRHLKES--QDLRRAHQENVKRLKNLLEAL-GIPVIPNPSHIVPVIIGD-----------------AAL 339 (402)
T ss_pred CHHHHHHHHHHHHHhhcC--HHHHHHHHHHHHHHHHHHHHc-CCCcCCCCCCEEEEEeCC-----------------HHH
Confidence 1 1122333445444222 445556678999999999887 665 2 666665422 122
Q ss_pred HHHHHHHHHhc-CcEEEeee----eECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 048643 444 NRELLESINAS-GKAYMTHA----VCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAF 498 (506)
Q Consensus 444 ~~~l~~~l~~~-g~~~~~~~----~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l 498 (506)
..++.++|.++ |+ ++.+. ...+..++|+++. ...+++||++++++|+++.+++
T Consensus 340 a~~~~~~L~~~~Gi-~v~~~~~p~~~~g~~~lRis~~-~~~t~edi~~~~~~l~~~~~~~ 397 (402)
T TIGR01821 340 CKKVSDLLLNKHGI-YVQPINYPTVPRGTERLRITPT-PAHTDKMIDDLVEALLLVWDRL 397 (402)
T ss_pred HHHHHHHHHhcCCE-EEEeECCCCCCCCCceEEEEeC-CCCCHHHHHHHHHHHHHHHHHc
Confidence 45677777654 65 45442 2345578999995 5667779999999999998765
No 87
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.82 E-value=2.6e-18 Score=179.51 Aligned_cols=315 Identities=12% Similarity=0.075 Sum_probs=197.7
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCCccccCCCCcE--EEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCC------
Q 048643 127 SPAATELENIVMDWLGQMLKLPKSFLFSGNGGG--VIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSD------ 198 (506)
Q Consensus 127 ~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g--~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~------ 198 (506)
.....++|..+.+...++|+...+. .+ +-..+|+.||+.++.+... ++..|++.+
T Consensus 75 ~~~~d~lE~~~~~~~~~~f~~~~~~------~~~nv~~~SG~~AN~av~~aL~~-----------pgD~Il~~d~~~gGh 137 (475)
T PLN03226 75 NEYIDQIETLCQKRALEAFRLDPEK------WGVNVQPLSGSPANFAVYTALLQ-----------PHDRIMGLDLPHGGH 137 (475)
T ss_pred ChhHHHHHHHHHHHHHHHhCCCcce------eEEecCcCchHHHHHHHHHHhCC-----------CCCEEEECCCCcCcc
Confidence 3467899999999999999987652 11 1136789999888777644 566777633
Q ss_pred CCchHHHHHHHHhCCCCC-CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHH
Q 048643 199 QTHCALQKAAQIVGIDLK-NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQ 277 (506)
Q Consensus 199 ~~H~s~~ka~~~~G~g~~-~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~ 277 (506)
..|.+...++++.+.+.. ++++.+.+. +++.+|+++|++++.+. +|.+|++ +.+.+|..-|+++|+++|++
T Consensus 138 l~H~~~~~g~~~s~~~~~~~~~~y~~~~-~~g~iD~d~Le~~l~~~-----~pklIv~--~~S~~s~~~D~a~i~~ia~~ 209 (475)
T PLN03226 138 LSHGYQTDGKKISATSIYFESMPYRLDE-STGLIDYDKLEKKAMLF-----RPKLIIA--GASAYPRDWDYARMRKIADK 209 (475)
T ss_pred hhhhhhhcccccccceEEEEeeeeeecC-CCCCcCHHHHHHHHhhc-----CCeEEEE--ecCcCCCccCHHHHHHHHHH
Confidence 344454444433333100 111334454 35799999999998753 2444544 34568888999999999999
Q ss_pred hCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCC-c---cccCCcccc
Q 048643 278 FGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTN-P---EYLKNKATE 353 (506)
Q Consensus 278 ~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~-~---~yl~~~~~~ 353 (506)
+|++++||+||+.+++..+..... ++.+|.++.++||||..|.| |++++++... ..+... . .|...
T Consensus 210 ~ga~LlvD~AH~~Gli~~~~~~~p---~~~~Div~~t~hK~L~GP~G-g~I~~~~~~~--~~~~~g~~~~~d~~~~---- 279 (475)
T PLN03226 210 VGALLMCDMAHISGLVAAQEAASP---FEYCDVVTTTTHKSLRGPRG-GMIFFRKGPK--PPKGQGEGAVYDYEDK---- 279 (475)
T ss_pred cCCEEEEEchhhhCcccCCCCCCC---CCCCeEEEecCcccccCCCc-eEEEEchhhc--ccccCCCccHHHHHHH----
Confidence 999999999999887765433222 33799999999999999998 8888765321 111000 0 11000
Q ss_pred CCCccCC-CCccccCCCC-CCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c----ceEEEeecCC
Q 048643 354 SKQVVDY-KDWQITLSRR-FRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS---P----SAVMDKLKPK 424 (506)
Q Consensus 354 ~~~~~~~-~~~~~~~sr~-~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p----~~v~f~~~~~ 424 (506)
.+. ....++.+-. .....+..+++.+-..+++++.++..+++++|++.|.+. ||. + .++.+.+.+.
T Consensus 280 ----i~~a~~~~~~g~p~~~~iaal~aAl~~i~~~~~~~~~~~~~~na~~L~~~L~~~-G~~l~~~~t~~hi~lv~~~~~ 354 (475)
T PLN03226 280 ----INFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKAYQKQVKANAAALANRLMSK-GYKLVTGGTDNHLVLWDLRPL 354 (475)
T ss_pred ----hccccCCccCCCchHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHhC-CCEEEcCCCCCCEEEEEccCC
Confidence 000 0011222311 223556677777766788888999999999999999985 777 1 5565555443
Q ss_pred CcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeee-----ECCEEEEEEEe---cCCCCCHHHHHHHHHHHHHHHH
Q 048643 425 YENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAV-----CGGIYAMRFAV---GATLTEERHVMVAWTMVQEQLE 496 (506)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-----~~g~~~lR~~~---~~~~tt~edi~~li~~l~~~~~ 496 (506)
+. ...++.+.|.+.|+..-..+. .-....+|+.. ++...+++|++++.+.|.++.+
T Consensus 355 gi----------------~~~~~~~~L~~~~I~~nk~~~p~~~~~~~~~giRiGt~~lt~~g~~~~d~~~ia~~i~~~~~ 418 (475)
T PLN03226 355 GL----------------TGSRVEKVLDLAHITLNKNAVPGDSSALVPGGVRIGTPAMTSRGLVEKDFEKVAEFLHRAVT 418 (475)
T ss_pred CC----------------CHHHHHHHHHHCCCEECCCCCCCCcccCCCCCcccCcHHHHHCCCCHHHHHHHHHHHHHHHH
Confidence 11 123444455555654221110 01123577732 4566788899999999988876
Q ss_pred H
Q 048643 497 A 497 (506)
Q Consensus 497 ~ 497 (506)
.
T Consensus 419 ~ 419 (475)
T PLN03226 419 I 419 (475)
T ss_pred H
Confidence 3
No 88
>PRK07324 transaminase; Validated
Probab=99.82 E-value=5.1e-18 Score=173.73 Aligned_cols=303 Identities=13% Similarity=0.076 Sum_probs=192.0
Q ss_pred CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCC
Q 048643 121 GFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQT 200 (506)
Q Consensus 121 ~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~ 200 (506)
...|....+..++++.+.+|+. +.+++ ..++|+|+++++..++.+..+ ++..|+++..+
T Consensus 55 ~~~Y~~~~G~~~lr~~ia~~~~---~~~~~-------~vi~t~G~~~al~~~~~~l~~-----------~gd~Vl~~~P~ 113 (373)
T PRK07324 55 KLTYGWIEGSPEFKEAVASLYQ---NVKPE-------NILQTNGATGANFLVLYALVE-----------PGDHVISVYPT 113 (373)
T ss_pred CccCCCCCCCHHHHHHHHHHhc---CCChh-------hEEEcCChHHHHHHHHHHhCC-----------CCCEEEEcCCC
Confidence 3345444455677777666653 34433 689999999999887766533 55678888899
Q ss_pred chHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC---hhHHHHHHHH
Q 048643 201 HCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP---LKPLCDVAKQ 277 (506)
Q Consensus 201 H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp---l~~I~~ia~~ 277 (506)
|.++...++..|. +++.+|++.++++.+|+++|++++.+.+ .+|+++.++|+||.+-+ +++|+++|++
T Consensus 114 y~~~~~~~~~~g~---~v~~v~~~~~~~~~~d~~~l~~~~~~~~------kli~i~~p~NPtG~~~~~~~l~~i~~~a~~ 184 (373)
T PRK07324 114 YQQLYDIPESLGA---EVDYWQLKEENGWLPDLDELRRLVRPNT------KLICINNANNPTGALMDRAYLEEIVEIARS 184 (373)
T ss_pred chhHHHHHHHcCC---EEEEEecccccCCCCCHHHHHHhCCCCC------cEEEEeCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 9999999999999 9999999865557899999998876543 37888999999999977 8999999999
Q ss_pred hCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCC-CcceEEEEeCchhHHhhhcCCccccCCccccCCC
Q 048643 278 FGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQ 356 (506)
Q Consensus 278 ~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~ 356 (506)
||+++++|++|..... ...........++ .....++.|.++.| ..+|+++. ++..+ ..+.....+..
T Consensus 185 ~~~~ii~De~y~~l~~-~~~~~s~~~~~~~-~I~~~s~SK~~~~~G~RiG~i~~-~~~li-~~~~~~~~~~~-------- 252 (373)
T PRK07324 185 VDAYVLSDEVYRPLDE-DGSTPSIADLYEK-GISTNSMSKTYSLPGIRVGWIAA-NEEVI-DILRKYRDYTM-------- 252 (373)
T ss_pred CCCEEEEEcccccccc-CCCCCChhhccCC-EEEEecchhhcCCccceeEEEec-CHHHH-HHHHHHhCcEE--------
Confidence 9999999999976432 1111111111111 23345788998744 55788876 44333 33322111110
Q ss_pred ccCCCCccccCCCCCCchHHHHHHHHhc--hhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c--ceEEE-eecCCCccc
Q 048643 357 VVDYKDWQITLSRRFRSLKLWLVIRNYG--VANLRHFLRSHVNMAKLFERLVASDKRVS---P--SAVMD-KLKPKYENC 428 (506)
Q Consensus 357 ~~~~~~~~~~~sr~~~al~~~~~l~~~G--~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p--~~v~f-~~~~~~~~~ 428 (506)
+ + ...+.-+++...+. ..-++++.+...++.+.+.+.|++.+++. | +...| ++...
T Consensus 253 --------~-~---~~~~~q~~a~~~l~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~p~gg~~~~i~~~~~---- 316 (373)
T PRK07324 253 --------I-C---AGVFDDMLASLALEHRDAILERNRKIVRTNLAILDEWVAKEPRVSYVKPKAVSTSFVKLDVD---- 316 (373)
T ss_pred --------e-c---CChHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEECCCceEEEEEEeCCC----
Confidence 0 0 01122233333332 23345555556667788888888877765 5 33333 33211
Q ss_pred ccccccchHHHHHHHHHHHHHHHH-hcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 048643 429 HSQQLVTEEEAINEFNRELLESIN-ASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEA 497 (506)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~ 497 (506)
....++.+++. +.|+....+..+...+++|+++.. +++.+.+.++.|.+..++
T Consensus 317 -------------~~~~~~~~~ll~~~gv~v~pg~~F~~~~~iRis~~~---~~~~l~~~l~rl~~~l~~ 370 (373)
T PRK07324 317 -------------MPSEDFCLKLLKETGVLLVPGNRFDLEGHVRIGYCC---DTETLKKGLKKLSEFLRE 370 (373)
T ss_pred -------------CCHHHHHHHHHHhcCEEEECccccCCCCeEEEEecC---CHHHHHHHHHHHHHHHHh
Confidence 01234556654 456654444444445699999853 567888888887776643
No 89
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.82 E-value=9.2e-18 Score=157.25 Aligned_cols=337 Identities=11% Similarity=0.077 Sum_probs=227.1
Q ss_pred cCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHH
Q 048643 98 YFPSSGSIAGFLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAAR 177 (506)
Q Consensus 98 ~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar 177 (506)
+.|++.+.+.. +..+++.+...+ .+|.+..+.+++.+-+...|...... --++.++|+.+.-.|+.-..
T Consensus 21 ~gPGPsnl~~~----V~~A~~~~~lgh-~sPe~~qIm~~v~egikyVFkT~n~~------tf~isgsGh~g~E~al~N~l 89 (385)
T KOG2862|consen 21 LGPGPSNLSGR----VQEAMSRPSLGH-MSPEFVQIMDEVLEGIKYVFKTANAQ------TFVISGSGHSGWEAALVNLL 89 (385)
T ss_pred ecCCCcCCCHH----HHHhhcCCcccc-CCHHHHHHHHHHHHHHHHHhccCCCc------eEEEecCCcchHHHHHHhhc
Confidence 44666655544 444555554443 68999999999999999999876553 33677777766665555443
Q ss_pred HHHHHhhcccCCCCeEEEeCCCCch--HHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEE
Q 048643 178 DRVLNKIGRENISKLVVYGSDQTHC--ALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCA 255 (506)
Q Consensus 178 ~~~~~~~~~~~~~~~~v~~s~~~H~--s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~ 255 (506)
+ |++.+++-...-. .+...++.+|+ +|..|+.+..+ ...+|.+++++.+. +|.+|++
T Consensus 90 e-----------Pgd~vLv~~~G~wg~ra~D~~~r~ga---~V~~v~~~~G~--~~~le~i~~~lsqh-----~p~~vfv 148 (385)
T KOG2862|consen 90 E-----------PGDNVLVVSTGTWGQRAADCARRYGA---EVDVVEADIGQ--AVPLEEITEKLSQH-----KPKAVFV 148 (385)
T ss_pred C-----------CCCeEEEEEechHHHHHHHHHHhhCc---eeeEEecCccc--CccHHHHHHHHHhc-----CCceEEE
Confidence 3 4444444333333 34556788899 99999988743 89999999999885 4779999
Q ss_pred eccCCCCCcccC-hhHHHHHHHHhCCEEEeeccc--ccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeC
Q 048643 256 TIGTTAITAVDP-LKPLCDVAKQFGIWVHVDAAY--AGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKD 332 (506)
Q Consensus 256 t~gtt~tG~idp-l~~I~~ia~~~g~~lhVDaA~--gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~ 332 (506)
++|.|.||...| ++.+.++||+|+..|.||+.- ||--+..+++ ++|......+|.++.|.|.+++...+
T Consensus 149 ~hgdsSTgV~q~~~~~~g~lc~k~~~lllVD~VaSlggt~F~mDew--------gVDvaytgSQKaL~aP~GLsiisfS~ 220 (385)
T KOG2862|consen 149 THGDSSTGVLQDLLAISGELCHKHEALLLVDTVASLGGTEFEMDEW--------GVDVAYTGSQKALGAPAGLSIISFSD 220 (385)
T ss_pred EecCccccccchHHHHHHHHhhcCCeEEEEechhhcCCccceehhh--------cccEEEecchhhcCCCCCcceeecCH
Confidence 999999999999 788899999999999999854 3333333444 89999999999999999999987766
Q ss_pred chhHHhhhc--CC--ccccCCcc-----ccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHH
Q 048643 333 PSALVSSLS--TN--PEYLKNKA-----TESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFE 403 (506)
Q Consensus 333 ~~~l~~~~~--~~--~~yl~~~~-----~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~ 403 (506)
+..- ++. .. ..|.++.. ...++.+....+|+..+ ....+-.+|..+-++|+++.++++.+++++++
T Consensus 221 ka~~--~~~~rK~~~~~~yFd~~~~~~~wgc~~e~~~yhhT~pv~---lly~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~ 295 (385)
T KOG2862|consen 221 KALE--AIRDRKTKPVSFYFDILRLGNFWGCDGEPRAYHHTPPVQ---LLYSLRAALALIAEEGLENSWRRHREMSKWLK 295 (385)
T ss_pred HHHH--HHhhccCCceEEEEeHHhhcchhccCCcccccccCCcHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6432 221 11 12222110 00000111111111100 11466677888899999999999999999999
Q ss_pred HHHHcCCCCc----------cceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeee-ECCEEEEEE
Q 048643 404 RLVASDKRVS----------PSAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAV-CGGIYAMRF 472 (506)
Q Consensus 404 ~~l~~~~~~~----------p~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-~~g~~~lR~ 472 (506)
..|++. |++ |....... |.. ..-.++...+..++.+-+++.- .-...++|+
T Consensus 296 ~~l~~~-GLq~fv~~e~~rlptvttv~v-p~g----------------vDw~dVv~~~~~~~~vei~gglg~~~gKv~RI 357 (385)
T KOG2862|consen 296 LSLEAL-GLQLFVVDEELRLPTVTTVKV-PYG----------------VDWKDVVAYAMSHYVVEIGGGLGPTVGKVFRI 357 (385)
T ss_pred HHHHHh-CccceecChhhccCcceeeec-CCC----------------CCHHHHHHHHHHhcCEEeccccCCCcccEEEE
Confidence 999997 665 22222222 221 0124555666666665555432 123568999
Q ss_pred EecCCCCCHHHHHHHHHHHHHHHHH
Q 048643 473 AVGATLTEERHVMVAWTMVQEQLEA 497 (506)
Q Consensus 473 ~~~~~~tt~edi~~li~~l~~~~~~ 497 (506)
.++..+.+.|.|+..++.|....++
T Consensus 358 Gl~gcna~~e~i~~v~~ll~~alq~ 382 (385)
T KOG2862|consen 358 GLLGCNANVEYIDNVVELLKLALQR 382 (385)
T ss_pred EEeeccCCcHHHHHHHHHHHHHHhh
Confidence 9998899999999999988877553
No 90
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.82 E-value=1.5e-19 Score=182.44 Aligned_cols=286 Identities=18% Similarity=0.183 Sum_probs=183.9
Q ss_pred HHHHHHHHhcCCCCCCCCCCccccCCCCCCHHH-----HHHHH-HH-hh-cCCCCcccccChhhHHHHHHHHHHHHHHcC
Q 048643 75 ILQDVQEHIVPGVTHWQSPNYFAYFPSSGSIAG-----FLGEM-LS-SG-FNVVGFNWISSPAATELENIVMDWLGQMLK 146 (506)
Q Consensus 75 il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-----~~~~~-l~-~~-~n~~~~~~~~~p~~~~lE~~~~~~la~l~g 146 (506)
+++.|.+....+...|+-|.+-+-..-...+.+ ..++- +. .. ..-.....-..|.....|.+ +.+|++||
T Consensus 3 l~~aL~~y~~~~~~~fh~PGHk~G~~~~~~p~g~~~~~f~G~~~~~~Dl~te~~~lD~L~~p~G~I~eAe--~~aA~~fG 80 (417)
T PF01276_consen 3 LFEALKKYAEEGPYSFHMPGHKGGRGFDKSPAGRLFYDFFGENLFRADLSTEVPGLDDLHDPEGIIKEAE--ELAARAFG 80 (417)
T ss_dssp HHHHHHHHHHTT-EESSSSTTTTTTCGGGSHHHHHHHHHH-HHHHHT---TTSTTCBBTTTTBTHHHHHH--HHHHHHHT
T ss_pred HHHHHHHHHhCCCceeecCccCCCCCCCcchHHHHHHHHHhhHHHHHHHhhcccccCcccCCccHHHHHH--HHHHHhcC
Confidence 455666666677888888877652211122222 12221 11 11 11122222334544445544 88999999
Q ss_pred CCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCC
Q 048643 147 LPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKS 226 (506)
Q Consensus 147 ~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~ 226 (506)
.+.++ ++++|+|.+|..++.++.. ++..|++++.+|-|+..++.+.|+ ..++|+...+
T Consensus 81 Ad~t~--------flvnGsT~g~~a~i~a~~~-----------~gd~VLv~RN~HkSv~~alil~ga---~Pvyi~p~~~ 138 (417)
T PF01276_consen 81 ADKTF--------FLVNGSTSGNQAMIMALCR-----------PGDKVLVDRNCHKSVYNALILSGA---IPVYIPPEDN 138 (417)
T ss_dssp ESEEE--------EESSHHHHHHHHHHHHHTT-----------TTCEEEEETT--HHHHHHHHHHTE---EEEEEEEEE-
T ss_pred CCeEE--------EEecCchHHHHHHHHHhcC-----------CCCEEEEcCCcHHHHHHHHHHcCC---eEEEecCCcc
Confidence 99875 8889999999988887755 778899999999999999999999 9998877522
Q ss_pred C---CcccCH-----HHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecccccccccCccc
Q 048643 227 S---SYGLSP-----DSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEF 298 (506)
Q Consensus 227 ~---~~~~d~-----~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~ 298 (506)
+ -+.+++ +.++++|++..... .|.+|++|.+ |+.|.+-|+++|+++|+++++.++||+|||+.+.+.+-+
T Consensus 139 ~~gi~~~i~~~~~~~~~i~~~l~~~p~~k-~~~~vvlt~P-TY~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~~lp 216 (417)
T PF01276_consen 139 EYGIIGGISPDEFNEEDIEEALKEHPDAK-APRLVVLTSP-TYYGVCYDIKEIAEICHKHGIPLLVDEAHGAHFGFHPLP 216 (417)
T ss_dssp TTS-BEEB-GGGGSHHHHHHHHHHCTTCH-CESEEEEESS--TTSEEE-HHHHHHHHCCTECEEEEE-TT-TTGGCSGGG
T ss_pred ccCCccCCChhhhhHHHHHHHHHhCcccc-CceEEEEeCC-CCCeEEECHHHHHHHhcccCCEEEEEccccccccCCCCc
Confidence 1 135666 99999998764322 2556777776 578999999999999999999999999999998887544
Q ss_pred hhhhcCCCCCC-------eeEEcCccccCCCCcceEEEEeCch-h----HHhhh----cCCccccCCccccCCCccCCCC
Q 048643 299 QHFIDGVEGAD-------SFSLNAHKWFFTTLDCCCLWVKDPS-A----LVSSL----STNPEYLKNKATESKQVVDYKD 362 (506)
Q Consensus 299 ~~~~~gi~~aD-------si~~~~hK~l~~p~~~g~~~~r~~~-~----l~~~~----~~~~~yl~~~~~~~~~~~~~~~ 362 (506)
+..+. -+|| .++.+.||.|.+--.++++.+++.. . +.+++ +..|.|+.-
T Consensus 217 ~~a~~--~gad~~~~~~~~vvqS~HKtL~altQts~lh~~~~~~v~~~~~~~~l~~~~TTSPSY~lm------------- 281 (417)
T PF01276_consen 217 RSALA--LGADRPNDPGIIVVQSTHKTLPALTQTSMLHVKGDRIVDHERVNEALSMHQTTSPSYPLM------------- 281 (417)
T ss_dssp TTCSS--TTSS-CTSBEEEEEEEHHHHSSS-TT-EEEEEETCCCTTHHHHHHHHHHHS-SS--HHHH-------------
T ss_pred cchhh--ccCccccccceeeeechhhcccccccceEEEecCCCcccHHHHHHHHHHHcCCChHHHHH-------------
Confidence 44332 2789 9999999999999999999999874 2 22222 122223210
Q ss_pred ccccCCCCCCchHHHHHHHHh-chhHHHHHHHHHHHHHHHHHHHH---HcCCCCc
Q 048643 363 WQITLSRRFRSLKLWLVIRNY-GVANLRHFLRSHVNMAKLFERLV---ASDKRVS 413 (506)
Q Consensus 363 ~~~~~sr~~~al~~~~~l~~~-G~~g~~~~i~~~~~~a~~l~~~l---~~~~~~~ 413 (506)
..+=.+.+.+ +.+| ++++++.++++..++++| .+.++|+
T Consensus 282 -----------ASlD~a~~~m~~~~G-~~l~~~~i~~a~~~R~~i~~~~~~~~~~ 324 (417)
T PF01276_consen 282 -----------ASLDVARAQMEEEEG-RELLEEAIELAEEFRKKINRLNDIWGFK 324 (417)
T ss_dssp -----------HHHHHHHHHHSHHHH-HHHHHHHHHHHHHHHHHHHHHCCT-SSE
T ss_pred -----------HHHHHHHHHHhhhhh-HHHHHHHHHHHHHHHHHHHhcCCCceEe
Confidence 1112233344 3333 567788888899999998 5565665
No 91
>PLN02656 tyrosine transaminase
Probab=99.82 E-value=2.9e-17 Score=170.24 Aligned_cols=333 Identities=12% Similarity=0.055 Sum_probs=211.3
Q ss_pred HHHHHHHHHhhcCCC-CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhh
Q 048643 106 AGFLGEMLSSGFNVV-GFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKI 184 (506)
Q Consensus 106 ~~~~~~~l~~~~n~~-~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~ 184 (506)
+..+.+.+...+..+ ...|....+..++++.+.+|+.+..|...+. ...++|+|+++++..++.+..+
T Consensus 50 ~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~-----~~i~~t~G~~~al~~~~~~l~~------ 118 (409)
T PLN02656 50 THVAQEAVVDALQSNKFNGYAPTVGLPQARRAIAEYLSRDLPYKLSL-----DDVFITSGCTQAIDVALSMLAR------ 118 (409)
T ss_pred CHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCc-----ccEEEeCChHHHHHHHHHHHhC------
Confidence 345555555555443 3456666677899999999999887764331 3788999999988776665432
Q ss_pred cccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCc
Q 048643 185 GRENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITA 264 (506)
Q Consensus 185 ~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~ 264 (506)
++..|+++..+|..+...++..|+ +++.+|+++++++.+|+++|++++++. +.+|+++.++|+||.
T Consensus 119 -----~gd~Vlv~~p~y~~~~~~~~~~g~---~~~~i~~~~~~~~~~d~~~l~~~~~~~------~~~v~l~~P~NPtG~ 184 (409)
T PLN02656 119 -----PGANILLPRPGFPIYELCAAFRHL---EVRYVDLLPEKGWEVDLDAVEALADQN------TVALVIINPGNPCGN 184 (409)
T ss_pred -----CCCeEEEeCCCCCcHHHHHHHcCC---EEEEEeCCCcCCCCCCHHHHHHHhccC------ceEEEEECCCCCCCC
Confidence 566788888999888888888999 999999865445789999999887653 336888889999999
Q ss_pred c---cChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCC-CCe-eEEcCccccC-CCCcceEEEEeCc-----
Q 048643 265 V---DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEG-ADS-FSLNAHKWFF-TTLDCCCLWVKDP----- 333 (506)
Q Consensus 265 i---dpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~-aDs-i~~~~hK~l~-~p~~~g~~~~r~~----- 333 (506)
+ +++++|+++|++||+|+++|++|+.+..-........ .+.. ... +..++.|.++ ..+.+|+++..++
T Consensus 185 ~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~-~~~~~~~vi~~~SfSK~f~~pGlRiG~~i~~~~~~~~~ 263 (409)
T PLN02656 185 VYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMG-VFGSIVPVLTLGSLSKRWIVPGWRLGWFVTTDPSGSFR 263 (409)
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHH-HhcccCcEEEEcccchhccCcceeEEEEEEeCcccccc
Confidence 9 6799999999999999999999976543111111110 0111 112 3455889855 4478999988542
Q ss_pred -hhHHhhhcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHh---chhHHHHHHHHHHHHHHHHHHHHHcC
Q 048643 334 -SALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNY---GVANLRHFLRSHVNMAKLFERLVASD 409 (506)
Q Consensus 334 -~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~---G~~g~~~~i~~~~~~a~~l~~~l~~~ 409 (506)
..+...+........ + ...+..+++...+ ..+.+++..++..+..+.+.+.|+++
T Consensus 264 ~~~~~~~~~~~~~~~~------------------~---~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~ 322 (409)
T PLN02656 264 DPKIVERIKKYFDILG------------------G---PATFIQAAVPTILEQTDESFFKKTINILKQSSDICCDRIKEI 322 (409)
T ss_pred cHHHHHHHHHHHhhhc------------------C---CCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 122222211000000 0 0112223333333 23457777888888889999999887
Q ss_pred CCC---c-c--ce-EEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHH
Q 048643 410 KRV---S-P--SA-VMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEER 482 (506)
Q Consensus 410 ~~~---~-p--~~-v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~e 482 (506)
+++ . | +. +.+++..... . + .....+.+.+.+.+.|+.+..+..+....++|++++. +++
T Consensus 323 ~~~~~~~~p~gg~~~w~~l~~~~~-------~-~---~~~~~~~~~~~l~~~gV~v~pg~~fg~~~~iRi~~~~---~~e 388 (409)
T PLN02656 323 PCITCPHKPEGSMAVMVKLNLSLL-------E-D---ISDDIDFCFKLAREESVIILPGTAVGLKNWLRITFAA---DPS 388 (409)
T ss_pred CCCcCCcCCCeEEEEEEecchhhc-------C-C---CCCHHHHHHHHHHhCCEEEecchhcCCCCeEEEEeCC---CHH
Confidence 653 2 5 33 3334321000 0 0 0000122334555667765554444456799999963 577
Q ss_pred HHHHHHHHHHHHHHHHH
Q 048643 483 HVMVAWTMVQEQLEAFL 499 (506)
Q Consensus 483 di~~li~~l~~~~~~l~ 499 (506)
++++.++.|+++..+..
T Consensus 389 ~l~eal~rl~~~~~~~~ 405 (409)
T PLN02656 389 SLEEALGRIKSFYLRHS 405 (409)
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 88888888888776544
No 92
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.82 E-value=8.8e-18 Score=174.90 Aligned_cols=319 Identities=11% Similarity=0.073 Sum_probs=204.4
Q ss_pred ccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCch
Q 048643 123 NWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHC 202 (506)
Q Consensus 123 ~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~ 202 (506)
.|....+..++++.+.+++.+.+|++.+. ...++|+|+++++..++.+..+ ++..|+++..++.
T Consensus 89 ~Y~~~~G~~~lr~aia~~~~~~~~~~~~~-----~~v~it~G~~~al~l~~~~l~~-----------~Gd~Vlv~~P~y~ 152 (430)
T PLN00145 89 SYSTCVGLLPARRAIAEYLSRDLPYELST-----DDIYLTAGCAQAIEIIMSVLAQ-----------PGANILLPRPGYP 152 (430)
T ss_pred CCCCCccCHHHHHHHHHHHhhccCCCCCh-----hhEEEeCCHHHHHHHHHHHhcC-----------CCCEEEEcCCCCc
Confidence 45555677899999999998877765432 3789999999998777665432 5667888999998
Q ss_pred HHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC---hhHHHHHHHHhC
Q 048643 203 ALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP---LKPLCDVAKQFG 279 (506)
Q Consensus 203 s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp---l~~I~~ia~~~g 279 (506)
.+...+...|+ +++.+++.++.+|.+|+++|++.+++.+ .+++++.++|+||.+-| +++|+++|+++|
T Consensus 153 ~y~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~~~~~~------~~i~i~~P~NPtG~v~~~~~l~~i~~~a~~~~ 223 (430)
T PLN00145 153 LYEARAVFSGL---EVRHFDLLPERGWEVDLEGVEALADENT------VAMVIINPNNPCGSVYSYEHLAKIAETARKLG 223 (430)
T ss_pred cHHHHHHHcCC---EEEEeeCCcccCCcCCHHHHHHHhCcCc------eEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcC
Confidence 88888999999 9999987655568999999999886643 37888889999999977 888999999999
Q ss_pred CEEEeecccccccccCccchhhhcCCC-CCCee-EEcCccccC-CCCcceEEEEeCchhHHhh---hcCCccccCCcccc
Q 048643 280 IWVHVDAAYAGSACICPEFQHFIDGVE-GADSF-SLNAHKWFF-TTLDCCCLWVKDPSALVSS---LSTNPEYLKNKATE 353 (506)
Q Consensus 280 ~~lhVDaA~gg~~~~~~~~~~~~~gi~-~aDsi-~~~~hK~l~-~p~~~g~~~~r~~~~l~~~---~~~~~~yl~~~~~~ 353 (506)
+++++|++|+.+..-....... ..+. ....+ ..+..|.+. ..+-+|+++..++..+... ...-..+...
T Consensus 224 i~ii~De~Y~~~~~~~~~~~~~-~~~~~~~~vi~~~S~SK~~~~pG~RlG~iv~~~~~~~~~~~~~~~~~~~~~~~---- 298 (430)
T PLN00145 224 ILVIADEVYDHLTFGSKPFVPM-GVFGEVAPVLTLGSISKRWVVPGWRLGWIATCDPNGILKETKVVDSIRNYLNI---- 298 (430)
T ss_pred CEEEEeccchhhccCCCCccch-hhhcccCcEEEEeccccccCCCCeeEEEEEEecchhhhhhhHHHHHHHHHhcc----
Confidence 9999999997643211111111 0011 11223 445789855 4478999887543321110 0000001000
Q ss_pred CCCccCCCCccccCCCCCCchHHHHHHHHh---chhHHHHHHHHHHHHHHHHHHHHHcCCCCc----c---ceEEEeecC
Q 048643 354 SKQVVDYKDWQITLSRRFRSLKLWLVIRNY---GVANLRHFLRSHVNMAKLFERLVASDKRVS----P---SAVMDKLKP 423 (506)
Q Consensus 354 ~~~~~~~~~~~~~~sr~~~al~~~~~l~~~---G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~----p---~~v~f~~~~ 423 (506)
.. +. ..+...++...+ ..+.++++++...+.++.+.+.|++++++. | ..+.+++..
T Consensus 299 ----------~~-~~---~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~P~ga~y~~v~l~~ 364 (430)
T PLN00145 299 ----------ST-DP---ATFVQGAIPQIIANTKEEFFTKTLGLLKETADICYEKIKEIKCITCPHKPEGSMFVMVKLDL 364 (430)
T ss_pred ----------cC-CC---CHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcCCCeeeEEEeccCh
Confidence 00 00 111112222222 235678888888899999999999887764 5 334444321
Q ss_pred CCcccccccccchHHHHHHHHHHHHHHHH-hcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHc
Q 048643 424 KYENCHSQQLVTEEEAINEFNRELLESIN-ASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAFLT 500 (506)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l~~ 500 (506)
... .... ...++..++. +.|++.+.+..+...+++|+++.. ++++++..++.|.++.++-.+
T Consensus 365 ~~~-----------~~~~-~~~~~~~~ll~~~gV~v~pG~~fg~~~~lRis~~~---~~~~l~~al~rl~~~~~~~~~ 427 (430)
T PLN00145 365 SCL-----------SGIK-DDMDFCCKLAKEESVVVLPGSALGMKNWLRITFAI---DPPSLEDGLERLKSFCLRHAK 427 (430)
T ss_pred hhc-----------CCCC-CHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeCC---CHHHHHHHHHHHHHHHHHhcc
Confidence 100 0000 1233444444 456655554445556899999963 567888888888877765543
No 93
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.82 E-value=2.7e-17 Score=170.19 Aligned_cols=312 Identities=11% Similarity=0.102 Sum_probs=202.3
Q ss_pred cccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCc
Q 048643 122 FNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTH 201 (506)
Q Consensus 122 ~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H 201 (506)
..|....+..++.+.+.+|+++.+|.+.+. ....++|+|+++++..++.+..+ ++..|++...++
T Consensus 72 ~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~----~~~I~it~Ga~~al~~~~~~l~~-----------~Gd~Vlv~~P~y 136 (405)
T PRK06207 72 QAYTEYRGDADIRELLAARLAAFTGAPVDA----ADELIITPGTQGALFLAVAATVA-----------RGDKVAIVQPDY 136 (405)
T ss_pred ccCCCCCCCHHHHHHHHHHHHHHhCCCCCC----CCCEEEeCCcHHHHHHHHHHhcC-----------CCCEEEEeCCCc
Confidence 345555567889999999999999975320 02689999999888766665433 567788888999
Q ss_pred hHHHHHHHHhCCCCCCeEEEecC---CCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC---hhHHHHHH
Q 048643 202 CALQKAAQIVGIDLKNFRAIKTT---KSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP---LKPLCDVA 275 (506)
Q Consensus 202 ~s~~ka~~~~G~g~~~v~~v~~~---~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp---l~~I~~ia 275 (506)
......++.+|. +++.||++ .++++.+|++.|++++++.+ .+|+.+.++|+||.+-+ +++|+++|
T Consensus 137 ~~~~~~~~~~g~---~v~~v~~~~~~~~~~~~~d~~~l~~~~~~~~------k~v~l~~P~NPTG~~~s~e~l~~l~~~a 207 (405)
T PRK06207 137 FANRKLVEFFEG---EMVPVQLDYLSADKRAGLDLDQLEEAFKAGV------RVFLFSNPNNPAGVVYSAEEIAQIAALA 207 (405)
T ss_pred hhHHHHHHHcCC---EEEEEeccccCcccCCCcCHHHHHHhhhhcC------eEEEECCCCCCCCcCCCHHHHHHHHHHH
Confidence 999999999999 99999986 22357899999999986543 37888999999999966 78899999
Q ss_pred HHhCCEEEeecccccccccCccchhhhc-CCCCCC-eeEEcCccccCCC-CcceEEEEeCchhHHhhhcCCccccCCccc
Q 048643 276 KQFGIWVHVDAAYAGSACICPEFQHFID-GVEGAD-SFSLNAHKWFFTT-LDCCCLWVKDPSALVSSLSTNPEYLKNKAT 352 (506)
Q Consensus 276 ~~~g~~lhVDaA~gg~~~~~~~~~~~~~-gi~~aD-si~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~ 352 (506)
++||+|+++|.+|+-...-......... ....-. .+..++.|.++.| ..+|+++.. +.. .+.+.....+...
T Consensus 208 ~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpGlRiG~ii~~-~~l-~~~~~~~~~~~~~--- 282 (405)
T PRK06207 208 RRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSKTESLSGYRLGVAFGS-PAI-IDRMEKLQAIVSL--- 282 (405)
T ss_pred HHcCCEEEEeccccccccCCCCCCchhcCCCCcCcEEEEecchhhccCcccceEEEEcC-HHH-HHHHHHHHhHhcc---
Confidence 9999999999999765431111111110 000111 3556689999854 558887654 332 2233211111100
Q ss_pred cCCCccCCCCccccCCCCCCchHHHHHHHHh--chhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c---ceEEEeecCC
Q 048643 353 ESKQVVDYKDWQITLSRRFRSLKLWLVIRNY--GVANLRHFLRSHVNMAKLFERLVASDKRVS---P---SAVMDKLKPK 424 (506)
Q Consensus 353 ~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p---~~v~f~~~~~ 424 (506)
+. ..+...+....+ +...+.+.+++..+.++++.+.|++.++++ | ..+.+++.+.
T Consensus 283 --------------~~---~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~gg~fl~~~l~~~ 345 (405)
T PRK06207 283 --------------RA---AGYSQAVLRTWFSEPDGWMKDRIARHQAIRDDLLRVLRGVEGVFVRAPQAGSYLFPRLPRL 345 (405)
T ss_pred --------------CC---CHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCeeEEEEEeCccc
Confidence 00 111111222222 233467778888888889999998877766 4 3344444321
Q ss_pred CcccccccccchHHHHHHHHHHHHHHHH-hcCcEEEeeeeE--CCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 048643 425 YENCHSQQLVTEEEAINEFNRELLESIN-ASGKAYMTHAVC--GGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAF 498 (506)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~--~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l 498 (506)
. ....++.+.+. +.|+.+..+..+ .+..++|+++.. +++++++.++.|.++.++.
T Consensus 346 ~----------------~~~~~~~~~l~~~~gV~v~pG~~F~~~~~~~~Ris~~~---~~~~l~~al~rl~~~l~~~ 403 (405)
T PRK06207 346 A----------------VSLHDFVKILRLQAGVIVTPGTEFSPHTADSIRLNFSQ---DHAAAVAAAERIAQLIERY 403 (405)
T ss_pred C----------------CCHHHHHHHHHHhcCEEEeCchHhCCCCCCeEEEEecC---CHHHHHHHHHHHHHHHHHh
Confidence 0 00234666665 457654443333 235799999964 4678888888888877654
No 94
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.82 E-value=1.5e-17 Score=171.15 Aligned_cols=289 Identities=12% Similarity=0.055 Sum_probs=185.9
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHH
Q 048643 131 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQI 210 (506)
Q Consensus 131 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~ 210 (506)
..+..++.+++++++|.+ ..+++++|+++++.++.+... ++..|+++...|.+...++..
T Consensus 83 ~~~~~~l~~~la~~~~~~---------~~i~~~~g~~~~~~~l~~~~~-----------~gd~V~~~~~~~~~~~~~~~~ 142 (385)
T PRK05958 83 SPAHEALEEELAEWFGAE---------RALLFSSGYAANLAVLTALAG-----------KGDLIVSDKLNHASLIDGARL 142 (385)
T ss_pred cHHHHHHHHHHHHHhCCC---------cEEEECcHHHHHHHHHHHhCC-----------CCCEEEEeCccCHHHHHHHHh
Confidence 344556677888888843 457777788888765543321 556788889999999999999
Q ss_pred hCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeeccccc
Q 048643 211 VGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAG 290 (506)
Q Consensus 211 ~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg 290 (506)
.|. +++.+|. .|++.+++++++.. ..+.+|+.....+++|.+.|+++|+++|++||+|+++|++|+.
T Consensus 143 ~g~---~~~~~~~-------~d~~~l~~~i~~~~---~~~~lvi~~~~~~~~G~~~~l~~i~~ia~~~~~~li~De~~~~ 209 (385)
T PRK05958 143 SRA---RVRRYPH-------NDVDALEALLAKWR---AGRALIVTESVFSMDGDLAPLAELVALARRHGAWLLVDEAHGT 209 (385)
T ss_pred cCC---ceEEeCC-------CCHHHHHHHHHhcc---CCCeEEEEEecccCCCCcCCHHHHHHHHHHhCCEEEEECcccc
Confidence 898 8888874 37899999886531 1244566666778899999999999999999999999999965
Q ss_pred ccccCccch-hhhcCCC-CCC-eeEEcCccccCCCCcceEEEEeCchhHHhhhc-CCccccCCccccCCCccCCCCcccc
Q 048643 291 SACICPEFQ-HFIDGVE-GAD-SFSLNAHKWFFTTLDCCCLWVKDPSALVSSLS-TNPEYLKNKATESKQVVDYKDWQIT 366 (506)
Q Consensus 291 ~~~~~~~~~-~~~~gi~-~aD-si~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~-~~~~yl~~~~~~~~~~~~~~~~~~~ 366 (506)
+.+...... ....++. ..| .+..++||+++.+ | |+++. ++... +.+. ....|.. .
T Consensus 210 g~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~-G-g~~~~-~~~~~-~~~~~~~~~~~~-----------------~ 268 (385)
T PRK05958 210 GVLGPQGRGLAAEAGLAGEPDVILVGTLGKALGSS-G-AAVLG-SETLI-DYLINRARPFIF-----------------T 268 (385)
T ss_pred cccCCCCCchHHhhCCCCCCceEEEEechhhcccC-C-cEEEc-CHHHH-HHHHHhCcccee-----------------c
Confidence 433211000 0011221 234 5577899999753 3 55544 33322 2221 1111211 1
Q ss_pred CCC-CCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c--ceEEEeecCCCcccccccccchHHHH
Q 048643 367 LSR-RFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS---P--SAVMDKLKPKYENCHSQQLVTEEEAI 440 (506)
Q Consensus 367 ~sr-~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p--~~v~f~~~~~~~~~~~~~~~~~~~~~ 440 (506)
.+. ......++.+++.+... .++.++..++++++.+.|++. +++ | ++++|.+..
T Consensus 269 ~~~~~~~~aa~~aal~~~~~~--~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~----------------- 328 (385)
T PRK05958 269 TALPPAQAAAARAALRILRRE--PERRERLAALIARLRAGLRAL-GFQLMDSQSAIQPLIVGD----------------- 328 (385)
T ss_pred CCCCHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHc-CCCcCCCCCCEEEEEeCC-----------------
Confidence 111 11223344555544222 567788899999999999886 565 3 677777632
Q ss_pred HHHHHHHHHHHHhcCcEEEeeee---ECCEEEEEEEecCCCCCHHHHHHHHHHHHHH
Q 048643 441 NEFNRELLESINASGKAYMTHAV---CGGIYAMRFAVGATLTEERHVMVAWTMVQEQ 494 (506)
Q Consensus 441 ~~~~~~l~~~l~~~g~~~~~~~~---~~g~~~lR~~~~~~~tt~edi~~li~~l~~~ 494 (506)
.....++.+.|.+.|+....... ..+..++|+++ +...++++++++++.|+++
T Consensus 329 ~~~~~~~~~~l~~~gI~v~~~~~~~~~~~~~~lRis~-~~~~~~~~i~~~l~~l~~~ 384 (385)
T PRK05958 329 NERALALAAALQEQGFWVGAIRPPTVPAGTSRLRITL-TAAHTEADIDRLLEALAEA 384 (385)
T ss_pred HHHHHHHHHHHHHCCceEecccCCCCCCCCceEEEEe-cCCCCHHHHHHHHHHHHhc
Confidence 12245677888888875432111 12456899999 4566788999999999764
No 95
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.82 E-value=2.3e-17 Score=169.49 Aligned_cols=305 Identities=11% Similarity=0.039 Sum_probs=197.0
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHH--HHHhhcccC-CCCeEEEeCCCCchHHHHH
Q 048643 131 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDR--VLNKIGREN-ISKLVVYGSDQTHCALQKA 207 (506)
Q Consensus 131 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~--~~~~~~~~~-~~~~~v~~s~~~H~s~~ka 207 (506)
+.+..++.+.|++++|.+. .+++++|..||+.++.+.-.. .+...+... .++..|+.....|.|+..+
T Consensus 146 ~~~h~~LE~~LA~f~g~e~---------all~sSGy~AN~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG 216 (476)
T PLN02955 146 TTYHRLLESSLADLKKKED---------CLVCPTGFAANMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDG 216 (476)
T ss_pred hHHHHHHHHHHHHHHCCCc---------EEEECChHHHHHHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHHH
Confidence 3444455566888888764 588888999998877664210 000000000 1456788999999999999
Q ss_pred HHHhCC-CCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeec
Q 048643 208 AQIVGI-DLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDA 286 (506)
Q Consensus 208 ~~~~G~-g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDa 286 (506)
+++... |..+++.++ +.|+++|+++|+.... ...+||.....++.|.+-|+++|.++|++||++++||.
T Consensus 217 ~~ls~~~~~a~~~~f~-------HND~~~Le~~L~~~~~---~~~~Vv~EgV~SmdGdiapL~eL~~L~~~~ga~LiVDE 286 (476)
T PLN02955 217 VRLAERQGNVEVFVYR-------HCDMYHLNSLLSSCKM---KRKVVVTDSLFSMDGDFAPMEELSQLRKKYGFLLVIDD 286 (476)
T ss_pred HHhccccCCceEEEeC-------CCCHHHHHHHHHhCCC---CceEEEEeCCCCCCCCcCCHHHHHHHHHHcCcEEEEcc
Confidence 998732 112666665 4589999999976532 23467777778999999999999999999999999999
Q ss_pred ccccccccCccchhhhc--CC-CCCCeeEEcCccccCCCCcceEEEEeCchhHHhhh-cCCccccCCccccCCCccCCCC
Q 048643 287 AYAGSACICPEFQHFID--GV-EGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSL-STNPEYLKNKATESKQVVDYKD 362 (506)
Q Consensus 287 A~gg~~~~~~~~~~~~~--gi-~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~-~~~~~yl~~~~~~~~~~~~~~~ 362 (506)
||+.+.+- +..+.... ++ ...|.++.+.-|.++.. .|+++.++ .. .+.+ .....|++....
T Consensus 287 AH~~Gv~G-~~G~G~~e~~g~~~di~ii~~TLsKA~G~~--GGfi~gs~-~~-~~~l~~~~~~~ifStal---------- 351 (476)
T PLN02955 287 AHGTFVCG-ENGGGVAEEFNCEADVDLCVGTLSKAAGCH--GGFIACSK-KW-KQLIQSRGRSFIFSTAI---------- 351 (476)
T ss_pred cccCceec-CCCCcHHHHhCCCCCCcEEEEeCccchhcc--CceeecHH-HH-HHHHHHhCCCCeecccc----------
Confidence 99866543 22222211 22 46888999999998754 45555543 22 2333 233445543210
Q ss_pred ccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc-c-ceEEEeecCCCcccccccccchHHHH
Q 048643 363 WQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS-P-SAVMDKLKPKYENCHSQQLVTEEEAI 440 (506)
Q Consensus 363 ~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~-p-~~v~f~~~~~~~~~~~~~~~~~~~~~ 440 (506)
....+...-.+++.+-.+ ..+.++..++.++|++.+ ++. + +++.+.+...
T Consensus 352 ------pp~~aaa~laal~l~~~~--~~~r~~L~~n~~~fr~~~----G~~~~sPI~pI~ig~~---------------- 403 (476)
T PLN02955 352 ------PVPMAAAAYAAVVVARKE--KWRRKAIWERVKEFKALS----GVDISSPIISLVVGNQ---------------- 403 (476)
T ss_pred ------cHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHhc----CCCCCCCEEEEEeCCH----------------
Confidence 001112223333333122 235577778888888742 565 4 7777776442
Q ss_pred HHHHHHHHHHHHhcCcEE---EeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 048643 441 NEFNRELLESINASGKAY---MTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAFL 499 (506)
Q Consensus 441 ~~~~~~l~~~l~~~g~~~---~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l~ 499 (506)
.....+.++|.++|+.. ..|++..+...+|++++.. .+++||++++++|.++...+.
T Consensus 404 -~~a~~~~~~L~~~Gi~v~~i~yPtVP~g~~rLRi~lsA~-Ht~edId~lv~~L~~~~~~~~ 463 (476)
T PLN02955 404 -EKALKASRYLLKSGFHVMAIRPPTVPPNSCRLRVTLSAA-HTTEDVKKLITALSSCLDFDN 463 (476)
T ss_pred -HHHHHHHHHHHHCCCEEEEECCCCCCCCCceEEEeeCCC-CCHHHHHHHHHHHHHHHhhhc
Confidence 34567788888889742 3455667888899999654 555699999999998876653
No 96
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.82 E-value=3.2e-18 Score=177.99 Aligned_cols=299 Identities=12% Similarity=0.053 Sum_probs=187.8
Q ss_pred hhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHH-
Q 048643 128 PAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQK- 206 (506)
Q Consensus 128 p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~k- 206 (506)
+....+|+.+.+++++++|.+.. . +++++||+|+..++.+... ++..|+++..+|.++..
T Consensus 67 ~~~~~~e~~~~~~la~~~g~~~~-------~-i~~~sgt~al~~~l~~l~~-----------~gd~Vl~~~~~~~~~~~~ 127 (416)
T PRK00011 67 EYVDVVEQLAIDRAKELFGAEYA-------N-VQPHSGSQANAAVYFALLK-----------PGDTILGMDLAHGGHLTH 127 (416)
T ss_pred hHHHHHHHHHHHHHHHHhCCCce-------e-eecCCchHHHHHHHHHhcC-----------CCCEEEEeccccCCcccc
Confidence 45677888788899999999753 2 4445678888766655422 56678888888865422
Q ss_pred --HH--HHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEE
Q 048643 207 --AA--QIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWV 282 (506)
Q Consensus 207 --a~--~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~l 282 (506)
.. ...|. +++.++++.+ ++.+|+++|++++++.. |.+|+++. +.+|...|+++|+++|++||+++
T Consensus 128 ~~~~~~~~~g~---~~~~~~~~~~-~~~~d~~~l~~~i~~~~-----~k~v~~~~--~~~~~~~~~~~I~~la~~~~~~l 196 (416)
T PRK00011 128 GSPVNFSGKLY---NVVSYGVDEE-TGLIDYDEVEKLALEHK-----PKLIIAGA--SAYSRPIDFKRFREIADEVGAYL 196 (416)
T ss_pred cccccccccee---eEeecCcCcc-cCCcCHHHHHHHHHhcC-----CCEEEECC--CcCCCccCHHHHHHHHHHcCCEE
Confidence 11 12244 6778887643 47999999999997521 22455432 45677789999999999999999
Q ss_pred EeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhc-CCccccCCccccCCCccCCC
Q 048643 283 HVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLS-TNPEYLKNKATESKQVVDYK 361 (506)
Q Consensus 283 hVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~-~~~~yl~~~~~~~~~~~~~~ 361 (506)
++|+||+.+.......... +..+|.++.++||++.+|. .|++++++++... .+. ....+..
T Consensus 197 ivD~a~~~g~~~~g~~~~~---~~~~di~~~S~~K~l~g~~-gg~i~~~~~~~~~-~l~~~~~~~~~------------- 258 (416)
T PRK00011 197 MVDMAHIAGLVAAGVHPSP---VPHADVVTTTTHKTLRGPR-GGLILTNDEELAK-KINSAVFPGIQ------------- 258 (416)
T ss_pred EEECcchhcccccCccCCC---CCCCcEEEecCCcCCCCCC-ceEEEeCCHHHHH-HHHHHhCcccc-------------
Confidence 9999986544332111111 2268999999999997665 4566665544332 221 1111111
Q ss_pred CccccCCCCC-CchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc--c-----ceEEEeecCCCcccccccc
Q 048643 362 DWQITLSRRF-RSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS--P-----SAVMDKLKPKYENCHSQQL 433 (506)
Q Consensus 362 ~~~~~~sr~~-~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~--p-----~~v~f~~~~~~~~~~~~~~ 433 (506)
.+... ....++.++.....+++.+++++..++++++++.|++. +++ + +++.+.+.+..
T Consensus 259 -----~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~i~~~~~~-------- 324 (416)
T PRK00011 259 -----GGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALAER-GFRVVSGGTDNHLVLVDLRSKG-------- 324 (416)
T ss_pred -----CCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC-CCeeeecCCCCeEEEEeCcccC--------
Confidence 00001 11233444444445678889999999999999999986 665 1 45555553321
Q ss_pred cchHHHHHHHHHHHHHHHHhcCcEEEee------eeECCEEEEEEEecC---CCCCHHHHHHHHHHHHHHHH
Q 048643 434 VTEEEAINEFNRELLESINASGKAYMTH------AVCGGIYAMRFAVGA---TLTEERHVMVAWTMVQEQLE 496 (506)
Q Consensus 434 ~~~~~~~~~~~~~l~~~l~~~g~~~~~~------~~~~g~~~lR~~~~~---~~tt~edi~~li~~l~~~~~ 496 (506)
....++.+.|.+.|+..-.. ........+|++... ...+++|++++++.|+++..
T Consensus 325 --------~~~~~~~~~L~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~t~~di~~l~~~l~~~~~ 388 (416)
T PRK00011 325 --------LTGKEAEAALEEANITVNKNAVPFDPRSPFVTSGIRIGTPAITTRGFKEAEMKEIAELIADVLD 388 (416)
T ss_pred --------CCHHHHHHHHHHcCcEEccCcCCCCCCCCCCCCceEecCHHHhhcCcCHHHHHHHHHHHHHHHh
Confidence 01245666777778643211 111123468986522 23468899999999998754
No 97
>PLN02822 serine palmitoyltransferase
Probab=99.82 E-value=3.6e-17 Score=172.02 Aligned_cols=305 Identities=10% Similarity=0.044 Sum_probs=192.3
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHH
Q 048643 131 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQI 210 (506)
Q Consensus 131 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~ 210 (506)
.....++.+.+++++|.++ ..++++|++ ++..++.+... ++.+|++....|+++..++++
T Consensus 153 ~~~~~~Lee~La~~~~~~~--------~i~~s~G~~-a~~sai~a~~~-----------~gd~Ii~d~~~H~s~~~~~~l 212 (481)
T PLN02822 153 IDVHLDCETKIAKFLGTPD--------SILYSYGLS-TIFSVIPAFCK-----------KGDIIVADEGVHWGIQNGLYL 212 (481)
T ss_pred HHHHHHHHHHHHHHhCCCC--------EEEECCHHH-HHHHHHHHhCC-----------CCCEEEEeCCccHHHHHHHHH
Confidence 3444555566777777653 456665544 66555554322 566788889999999999999
Q ss_pred hCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcC---Ccc-EEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeec
Q 048643 211 VGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAG---LVP-LFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDA 286 (506)
Q Consensus 211 ~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g---~~p-~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDa 286 (506)
.|. +++.++.+ |.++|+..+++..+.. ..+ .+|++....+++|.+-|+++|+++|++||+++++|.
T Consensus 213 s~~---~~~~~~~n-------d~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~G~i~~L~~i~~l~~k~~~~LIvDE 282 (481)
T PLN02822 213 SRS---TIVYFKHN-------DMESLRNTLEKLTAENKRKKKLRRYIVVEAIYQNSGQIAPLDEIVRLKEKYRFRVLLDE 282 (481)
T ss_pred cCC---eEEEECCC-------CHHHHHHHHHHHhhhhcccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEEC
Confidence 887 88888754 5667777666533221 122 578888888889999999999999999999999999
Q ss_pred ccccccccCccchhh--hcCC--CCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhc-CCccccCCccccCCCccCCC
Q 048643 287 AYAGSACICPEFQHF--IDGV--EGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLS-TNPEYLKNKATESKQVVDYK 361 (506)
Q Consensus 287 A~gg~~~~~~~~~~~--~~gi--~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~-~~~~yl~~~~~~~~~~~~~~ 361 (506)
+|+.+.+ .+..+.. ..++ ...|.++.+..|.++++- |+++.+ +... +.+. ....|.+.
T Consensus 283 a~s~gvl-G~~G~G~~e~~~v~~~~~dii~~s~sKalg~~G--G~i~g~-~~ii-~~~~~~~~~~~fs------------ 345 (481)
T PLN02822 283 SNSFGVL-GKSGRGLSEHFGVPIEKIDIITAAMGHALATEG--GFCTGS-ARVV-DHQRLSSSGYVFS------------ 345 (481)
T ss_pred Ccccccc-CCCCCChHHHcCCCCCCCeEEEecchhhhhhCC--eEEEcC-HHHH-HHHHhcCCceeec------------
Confidence 9974332 2111111 1123 367889999999997432 555543 3332 2222 12222221
Q ss_pred CccccCCCC-CCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c---ceEEEeecCCCccccccccc
Q 048643 362 DWQITLSRR-FRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS---P---SAVMDKLKPKYENCHSQQLV 434 (506)
Q Consensus 362 ~~~~~~sr~-~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p---~~v~f~~~~~~~~~~~~~~~ 434 (506)
.+.+ ..+.+.-.+|+.+. ...++.++..++.++|++.|++.+++. | +++.+++....
T Consensus 346 -----a~lPp~~~~Aa~~aL~~l~--~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~spi~~l~l~~~~--------- 409 (481)
T PLN02822 346 -----ASLPPYLASAAITAIDVLE--DNPSVLAKLKENIALLHKGLSDIPGLSIGSNTLSPIVFLHLEKST--------- 409 (481)
T ss_pred -----cccCHHHHHHHHHHHHHHH--hCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEEEEeCCCc---------
Confidence 1111 01122223444332 235788889999999999999877776 3 66667764320
Q ss_pred chHHHHHHHHHHHHHHHH-hcCcEEEeeeeE------CCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHc
Q 048643 435 TEEEAINEFNRELLESIN-ASGKAYMTHAVC------GGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAFLT 500 (506)
Q Consensus 435 ~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~------~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l~~ 500 (506)
...+......+++.++|. ++|+ ++.+..+ .+...+|++++ ...+++||+++++.|+++...+..
T Consensus 410 ~~~~~~~~~~~~~~~~Ll~e~GV-~v~~~~~~~~~~~~~~~~lRi~is-~~~t~edI~~~~~~l~~~~~~~~~ 480 (481)
T PLN02822 410 GSAKEDLSLLEHIADRMLKEDSV-LVVVSKRSTLDKCRLPVGIRLFVS-AGHTESDILKASESLKRVAASVLK 480 (481)
T ss_pred ccccchHHHHHHHHHHHHhcCCE-EEEeeCCCCcCCCCCCCcEEEEEC-CCCCHHHHHHHHHHHHHHHHHHhc
Confidence 000001233467788887 6675 4554321 12347999985 556788999999999999887654
No 98
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.82 E-value=1.8e-17 Score=172.06 Aligned_cols=291 Identities=12% Similarity=0.112 Sum_probs=185.8
Q ss_pred HHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCCC
Q 048643 136 IVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGIDL 215 (506)
Q Consensus 136 ~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~ 215 (506)
++.+.+++++|.+ ..+++++|++||..++...... .++.+|+++...|.++..+++..|.
T Consensus 95 ~Le~~la~~~g~~---------~~i~~~sG~~a~~~~i~~l~~~---------~~g~~vi~~~~~h~s~~~~~~~~g~-- 154 (410)
T PRK13392 95 LLERELADLHGKE---------SALLFTSGYVSNDAALSTLGKL---------LPGCVILSDALNHASMIEGIRRSGA-- 154 (410)
T ss_pred HHHHHHHHHhCCC---------CEEEECcHHHHHHHHHHHHhcC---------CCCCEEEEehhhhHHHHHHHHHcCC--
Confidence 4446688888864 3466667788988777643211 0345788888899999999888888
Q ss_pred CCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecccccccccC
Q 048643 216 KNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIC 295 (506)
Q Consensus 216 ~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~~~ 295 (506)
+++.++.+ |.+.+++.++... ...+.+|+++.+++++|.+-|+++|.++|++||++++||+||+.+.+ .
T Consensus 155 -~~~~~~~~-------d~~~l~~~l~~~~--~~~t~~v~i~~~~n~tG~~~~l~~i~~l~~~~~~~livDea~~~g~~-g 223 (410)
T PRK13392 155 -EKQVFRHN-------DLADLEEQLASVD--PDRPKLIAFESVYSMDGDIAPIEAICDLADRYNALTYVDEVHAVGLY-G 223 (410)
T ss_pred -eEEEEeCC-------CHHHHHHHHHhcc--CCCCEEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCccccCc-C
Confidence 77776532 5667777776432 12356889999999999999999999999999999999999984432 1
Q ss_pred ccchhh--hcC-CCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCccccCCCCCC
Q 048643 296 PEFQHF--IDG-VEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFR 372 (506)
Q Consensus 296 ~~~~~~--~~g-i~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~ 372 (506)
+..... ..+ .+..|.++.+++|+++.+. |++.. ++...........+|.... .. ....
T Consensus 224 ~~g~g~~~~~~~~~~~div~~tlsK~~g~~G--G~~~~-~~~~~~~l~~~~~~~~~s~---------------~~-~~~~ 284 (410)
T PRK13392 224 ARGGGIAERDGLMDRIDMIQGTLAKAFGCLG--GYIAA-SADLIDFVRSFAPGFIFTT---------------AL-PPAV 284 (410)
T ss_pred CCCCchhhhccCCCCCcEEEEEChHhhhccc--chhhc-CHHHHHHHHHhCcchhccC---------------cC-CHHH
Confidence 111111 112 2357888889999998753 55543 3333221111222222110 00 0011
Q ss_pred chHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc--c---ceEEEeecCCCcccccccccchHHHHHHHHHHH
Q 048643 373 SLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS--P---SAVMDKLKPKYENCHSQQLVTEEEAINEFNREL 447 (506)
Q Consensus 373 al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~--p---~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l 447 (506)
...+..+|+.... ..+..++..++++++.+.|++. +++ | +++.+.+.. .....++
T Consensus 285 ~~a~~aaL~~~~~--~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~i~~~~-----------------~~~~~~~ 344 (410)
T PRK13392 285 AAGATAAIRHLKT--SQTERDAHQDRVAALKAKLNAN-GIPVMPSPSHIVPVMVGD-----------------PTLCKAI 344 (410)
T ss_pred HHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHc-CCCCCCCCCCEEEEEeCC-----------------HHHHHHH
Confidence 2333445554322 2344577788899999999887 676 3 566555432 1224567
Q ss_pred HHHHH-hcCcEEEeee----eECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 048643 448 LESIN-ASGKAYMTHA----VCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAF 498 (506)
Q Consensus 448 ~~~l~-~~g~~~~~~~----~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l 498 (506)
.++|. +.|+ ++.+. ...+..++|++++ ...+++|+++++++|+++.+++
T Consensus 345 ~~~L~~~~GI-~v~~~~~p~~~~~~~~lRis~~-~~~t~edid~l~~aL~~~~~~~ 398 (410)
T PRK13392 345 SDRLMSEHGI-YIQPINYPTVPRGTERLRITPT-PLHDDEDIDALVAALVAIWDRL 398 (410)
T ss_pred HHHHHHhCCE-EEeeeCCCCCCCCCceEEEEEC-CCCCHHHHHHHHHHHHHHHHHc
Confidence 77776 4565 44433 2235578999995 4556779999999999987654
No 99
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.82 E-value=4.8e-18 Score=175.94 Aligned_cols=303 Identities=11% Similarity=0.067 Sum_probs=189.6
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchH-HH
Q 048643 127 SPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCA-LQ 205 (506)
Q Consensus 127 ~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s-~~ 205 (506)
.|...++|+.+.+.+++++|.+. .-+++++|+.||+.++.+... ++..|+++...|.+ +.
T Consensus 69 ~~~~~~lE~~~~~~la~l~g~~~--------alv~~~SG~~A~~~~l~al~~-----------~GD~Vl~~~~~~~~~~~ 129 (416)
T PRK13034 69 CEFVDEVEALAIERAKQLFGCDY--------ANVQPHSGSQANGAVYLALLK-----------PGDTILGMSLSHGGHLT 129 (416)
T ss_pred ChHHHHHHHHHHHHHHHHhCCCc--------eEEecCCcHHHHHHHHHHhcC-----------CCCEEEEcCccceeeee
Confidence 46788899878889999999864 225568899999988776532 67789999999987 33
Q ss_pred HHHHHhCCCCCCe--EEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEE
Q 048643 206 KAAQIVGIDLKNF--RAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVH 283 (506)
Q Consensus 206 ka~~~~G~g~~~v--~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lh 283 (506)
.+++....+. .+ +.++++.. ++.+|+++|++.++.. .|.+|+.+. +.+|..-|+++|.++|++||++++
T Consensus 130 ~g~~~~~~~~-~~~~~~~~~~~~-~~~~d~~~le~~l~~~-----~~klVi~~~--~~~g~~~dl~~l~~la~~~g~~li 200 (416)
T PRK13034 130 HGAKVSLSGK-WYNAVQYGVDRL-TGLIDYDEVEELAKEH-----KPKLIIAGF--SAYPRELDFARFREIADEVGALLM 200 (416)
T ss_pred cCCcceeccc-eeeeEEcccccc-cCCcCHHHHHHHHhhc-----CCeEEEECC--CccccccCHHHHHHHHHHcCCEEE
Confidence 3333211110 22 34444432 4579999999988642 244555433 456888899999999999999999
Q ss_pred eecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCc
Q 048643 284 VDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDW 363 (506)
Q Consensus 284 VDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~ 363 (506)
||+||+.+....+... ..+..+|.++.++|||+.+|.| |++++.++... ..+.. +++..
T Consensus 201 vD~Aha~G~~~~g~~~---~~~~~~Di~~~s~~K~l~g~~G-G~v~~~~~~~~-~~~~~---~~~~~------------- 259 (416)
T PRK13034 201 VDMAHIAGLVAAGEHP---NPFPHAHVVTTTTHKTLRGPRG-GMILTNDEEIA-KKINS---AVFPG------------- 259 (416)
T ss_pred EeCcccccCcccCCCC---CCCCCceEEEEeCcccCCCCCC-eEEEECcHHHH-HHHHh---hcCCc-------------
Confidence 9999987766543221 1234799999999999988875 55556554322 11111 11110
Q ss_pred cccCCCCC-CchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c----ceEEEeecCCCcccccccccc
Q 048643 364 QITLSRRF-RSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS---P----SAVMDKLKPKYENCHSQQLVT 435 (506)
Q Consensus 364 ~~~~sr~~-~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p----~~v~f~~~~~~~~~~~~~~~~ 435 (506)
++.+... ...++..++...-..+..++.++..+++++|++.|++. ||. + +++.+.+....
T Consensus 260 -~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~~~L~~~-G~~~~~~~~~t~i~~v~~~~~~---------- 327 (416)
T PRK13034 260 -LQGGPLMHVIAAKAVAFGEALQPEFKTYAKQVIANAQALAEVLKER-GYDLVSGGTDNHLLLVDLRPKG---------- 327 (416)
T ss_pred -ccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHc-CCEeccCCCCCcEEEEEcCCCC----------
Confidence 0011111 11122223322212234466789999999999999887 664 1 55555544321
Q ss_pred hHHHHHHHHHHHHHHHHhcCcEEEeee-------eECCEEEEEEEecC---CCCCHHHHHHHHHHHHHHHHH
Q 048643 436 EEEAINEFNRELLESINASGKAYMTHA-------VCGGIYAMRFAVGA---TLTEERHVMVAWTMVQEQLEA 497 (506)
Q Consensus 436 ~~~~~~~~~~~l~~~l~~~g~~~~~~~-------~~~g~~~lR~~~~~---~~tt~edi~~li~~l~~~~~~ 497 (506)
.....+.++|.+.|+ ++... .......||+++.. ...+++||++++++|.++...
T Consensus 328 ------~~~~~~~~~L~~~GI-~v~~~~~p~~~~~p~~~~~lR~~~~~~t~~~~~~~di~~l~~~l~~~~~~ 392 (416)
T PRK13034 328 ------LSGKDAEQALERAGI-TVNKNTVPGDTESPFVTSGIRIGTPAGTTRGFGEAEFREIANWILDVLDD 392 (416)
T ss_pred ------CCHHHHHHHHHhCCc-EEeccCCCCCCcCCCCCCeeEeCcHHHHhCCCCHHHHHHHHHHHHHHHhc
Confidence 112344566667786 34321 01124579999732 145688999999999988653
No 100
>PRK07682 hypothetical protein; Validated
Probab=99.82 E-value=7.6e-18 Score=172.98 Aligned_cols=310 Identities=12% Similarity=0.085 Sum_probs=205.2
Q ss_pred cccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCc
Q 048643 122 FNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTH 201 (506)
Q Consensus 122 ~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H 201 (506)
..|...++...+.+.+.+|+.+.+|.+.+. ....++|+|+++|+..++.+..+ ++..|+++..+|
T Consensus 51 ~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~----~~~i~~t~G~~~al~~~~~~l~~-----------~gd~vl~~~p~y 115 (378)
T PRK07682 51 TSYTANAGLLELRQEIAKYLKKRFAVSYDP----NDEIIVTVGASQALDVAMRAIIN-----------PGDEVLIVEPSF 115 (378)
T ss_pred CCCCCCCCcHHHHHHHHHHHHHHhCCCCCC----CCcEEEeCChHHHHHHHHHHhCC-----------CCCEEEEeCCCc
Confidence 446556778899999999999988875321 01589999999888776655432 566788888999
Q ss_pred hHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCccc---ChhHHHHHHHHh
Q 048643 202 CALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVD---PLKPLCDVAKQF 278 (506)
Q Consensus 202 ~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~id---pl~~I~~ia~~~ 278 (506)
..+...++..|. +++.++++.++++.+|+++|++++.+. +.+|+.+.++|+||.+- .+++|+++|++|
T Consensus 116 ~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~~~~~------~~~v~~~~p~NPtG~~~s~~~~~~l~~~~~~~ 186 (378)
T PRK07682 116 VSYAPLVTLAGG---VPVPVATTLENEFKVQPAQIEAAITAK------TKAILLCSPNNPTGAVLNKSELEEIAVIVEKH 186 (378)
T ss_pred hhhHHHHHHcCC---EEEEeecCCccCCCCCHHHHHhhcCcc------cEEEEEECCCCCcCcCcCHHHHHHHHHHHHHc
Confidence 999999999998 899999865446799999999988653 33677788999999984 489999999999
Q ss_pred CCEEEeecccccccccCccchh--hhcCCCCCCeeEEcCccccCC-CCcceEEEEeCchhHHhhhcCCccccCCccccCC
Q 048643 279 GIWVHVDAAYAGSACICPEFQH--FIDGVEGADSFSLNAHKWFFT-TLDCCCLWVKDPSALVSSLSTNPEYLKNKATESK 355 (506)
Q Consensus 279 g~~lhVDaA~gg~~~~~~~~~~--~~~gi~~aDsi~~~~hK~l~~-p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~ 355 (506)
++++++|.+|+.+..- +.... .+.+...-..+..++.|.++. ...+|+++..+ . +.+.+.....+..
T Consensus 187 ~~~ii~De~y~~~~~~-~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~-~-~i~~l~~~~~~~~------- 256 (378)
T PRK07682 187 DLIVLSDEIYAELTYD-EAYTSFASIKGMRERTILISGFSKGFAMTGWRLGFIAAPV-Y-FSEAMLKIHQYSM------- 256 (378)
T ss_pred CcEEEEehhhhhcccC-CCCCChhhcccccCCEEEEecCcccccChhhhhhhhhcCH-H-HHHHHHHHHHhhc-------
Confidence 9999999999765431 11111 111121223566678999985 45688887643 2 2233321111110
Q ss_pred CccCCCCccccCCCCCCchHHHHHHHHh--chhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c--ceEEEe-ecCCCcc
Q 048643 356 QVVDYKDWQITLSRRFRSLKLWLVIRNY--GVANLRHFLRSHVNMAKLFERLVASDKRVS---P--SAVMDK-LKPKYEN 427 (506)
Q Consensus 356 ~~~~~~~~~~~~sr~~~al~~~~~l~~~--G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p--~~v~f~-~~~~~~~ 427 (506)
+ + ...+...++.+.+ |...++++.++..+.++++.+.|++. +++ | +.+.|. +.+..
T Consensus 257 -------~---~---~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~p~g~~~~~~~~~~~~-- 320 (378)
T PRK07682 257 -------M---C---APTMAQFAALEALRAGNDDVIRMRDSYRKRRNFFVTSFNEI-GLTCHVPGGAFYAFPSISSTG-- 320 (378)
T ss_pred -------c---C---CCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHC-CCccCCCCeeEEEEEeccCCC--
Confidence 0 0 1122223333333 34456777788888999999999987 666 5 444443 22211
Q ss_pred cccccccchHHHHHHHHHHHHHHHH-hcCcEEEeeeeE--CCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 048643 428 CHSQQLVTEEEAINEFNRELLESIN-ASGKAYMTHAVC--GGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAF 498 (506)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~--~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l 498 (506)
....++.+.+. +.|+.+..+..+ .+..++|++++. +++++++.++.|+++.+++
T Consensus 321 --------------~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~iRis~~~---~~~~l~~~l~~l~~~l~~~ 377 (378)
T PRK07682 321 --------------LSSEEFAEQLLLEEKVAVVPGSVFGESGEGFIRCSYAT---SLEQLQEAMKRMKRFVENK 377 (378)
T ss_pred --------------CCHHHHHHHHHHhCCEEEcCchhhCcCCCCeEEEEeCC---CHHHHHHHHHHHHHHHhhc
Confidence 01234566654 457654433322 236799999963 5779999999998877643
No 101
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.81 E-value=1e-17 Score=172.13 Aligned_cols=294 Identities=12% Similarity=0.096 Sum_probs=186.4
Q ss_pred HHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCCC
Q 048643 136 IVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGIDL 215 (506)
Q Consensus 136 ~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~ 215 (506)
++++++++++|.+.+ ..++|+|+++++..++.+... ++..|++++..+.....++...|.
T Consensus 70 ~lr~~ia~~l~~~~~-------~v~~~~g~t~al~~~~~~~~~-----------~gd~vl~~~p~y~~~~~~~~~~g~-- 129 (380)
T PRK06225 70 ELRELILKDLGLDDD-------EALITAGATESLYLVMRAFLS-----------PGDNAVTPDPGYLIIDNFASRFGA-- 129 (380)
T ss_pred HHHHHHHHhcCCCCC-------cEEEeCCHHHHHHHHHHHhcC-----------CCCEEEEcCCCCcchHHHHHHhCc--
Confidence 345677888888664 789999999998877766432 445677788888888888899999
Q ss_pred CCeEEEecCC-CCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc---cChhHHHHHHHHhCCEEEeecccccc
Q 048643 216 KNFRAIKTTK-SSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV---DPLKPLCDVAKQFGIWVHVDAAYAGS 291 (506)
Q Consensus 216 ~~v~~v~~~~-~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i---dpl~~I~~ia~~~g~~lhVDaA~gg~ 291 (506)
+++.+|++. .+++.+|++.|++++.+.+ .+|+++.++|+||.+ +++++|+++|++||+++++|++|+.+
T Consensus 130 -~~~~v~~~~~~~~~~~d~~~l~~~~~~~~------~~v~l~~p~NptG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~ 202 (380)
T PRK06225 130 -EVIEVPIYSEECNYKLTPELVKENMDENT------RLIYLIDPLNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDF 202 (380)
T ss_pred -eEEeeccccccCCccCCHHHHHhhcCCCc------eEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCcEEEEehhHHHH
Confidence 999999753 2347899999999886543 367777889999987 45999999999999999999999654
Q ss_pred cccCccchhhhcCCCCCCeeEEcCccccCCC-CcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCccccCCCC
Q 048643 292 ACICPEFQHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRR 370 (506)
Q Consensus 292 ~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~ 370 (506)
..-.+.... +. .....+..++.|+++.| ..+|++++++ ... +.+.. +.... ++ .+ .
T Consensus 203 ~~~~~~~~~-~~--~~~~i~~~s~SK~~g~~G~RiG~i~~~~-~l~-~~~~~---~~~~~------------~~--~~-~ 259 (380)
T PRK06225 203 AREHTLAAE-YA--PEHTVTSYSFSKIFGMAGLRIGAVVATP-DLI-EVVKS---IVIND------------LG--TN-V 259 (380)
T ss_pred hccCCchhh-cC--CCCEEEEeechhhcCCccceeEEEecCH-HHH-HHHHH---HHhcc------------cC--CC-H
Confidence 211110000 00 12234455788999744 4578888753 332 22211 10000 00 00 0
Q ss_pred CCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc----c---ceEEEeecCCCcccccccccchHHHHHHH
Q 048643 371 FRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS----P---SAVMDKLKPKYENCHSQQLVTEEEAINEF 443 (506)
Q Consensus 371 ~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~----p---~~v~f~~~~~~~~~~~~~~~~~~~~~~~~ 443 (506)
.....+...+.. ..+.+++..+...++.+++.+.|++++++. | +++.+.+.+.. ..
T Consensus 260 ~~~~~a~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~----------------~~ 322 (380)
T PRK06225 260 IAQEAAIAGLKV-KDEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVYPSHGNMMVIDISEAG----------------ID 322 (380)
T ss_pred HHHHHHHHHHhc-chHHHHHHHHHHHHHHHHHHHHHHhCcCCccccCCCCCeEEEEEccccc----------------CC
Confidence 011111222222 123334444445566777888888866643 3 45555443321 01
Q ss_pred HHHHHHHHHhcCcEEEeeeeE----CCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHc
Q 048643 444 NRELLESINASGKAYMTHAVC----GGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAFLT 500 (506)
Q Consensus 444 ~~~l~~~l~~~g~~~~~~~~~----~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l~~ 500 (506)
..++.++|.+.|+ ++.+... .+..++|+++.. ++++++++++.|+++.+++.+
T Consensus 323 ~~~l~~~l~~~gi-~v~~g~~~~~~~~~~~iR~s~~~---~~e~l~~~~~~l~~~~~~~~~ 379 (380)
T PRK06225 323 PEDLVEYLLERKI-FVRQGTYTSKRFGDRYIRVSFSI---PREQVEVFCEEFPDVVETLRT 379 (380)
T ss_pred HHHHHHHHHHCCE-EEcCCcccCcCCCCceEEEEeCC---CHHHHHHHHHHHHHHHHHhhc
Confidence 2456677777786 4444322 245689999853 678999999999999887654
No 102
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.81 E-value=7.3e-17 Score=170.60 Aligned_cols=329 Identities=14% Similarity=0.089 Sum_probs=207.1
Q ss_pred CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCC
Q 048643 121 GFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQT 200 (506)
Q Consensus 121 ~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~ 200 (506)
...|....+..++.+.+.+|+.+..|.+.+. ...++|+|+++++..++.+.... ++..|+++..+
T Consensus 108 ~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~-----~~I~it~Ga~~al~~~~~~l~~~----------~gD~Vlv~~P~ 172 (481)
T PTZ00377 108 TGAYTDSAGYPFVRKAVAAFIERRDGVPKDP-----SDIFLTDGASSGIKLLLQLLIGD----------PSDGVMIPIPQ 172 (481)
T ss_pred ccCcCcccCCHHHHHHHHHHHHHhcCCCCCh-----hhEEEcCCHHHHHHHHHHHhccC----------CCCEEEECCCC
Confidence 3457766788999999999999988876432 37899999999988777665411 56788999999
Q ss_pred chHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC---hhHHHHHHHH
Q 048643 201 HCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP---LKPLCDVAKQ 277 (506)
Q Consensus 201 H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp---l~~I~~ia~~ 277 (506)
+..+...++..|. +++.||++++++|.+|++.|++++.+..+++.++.+|+++.++|+||.+-+ +++|+++|++
T Consensus 173 y~~y~~~~~~~g~---~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~ 249 (481)
T PTZ00377 173 YPLYSAAITLLGG---KQVPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYE 249 (481)
T ss_pred chhHHHHHHHcCC---EEEEEEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHH
Confidence 9999999999999 999999986556899999999999875545445667777789999999976 8999999999
Q ss_pred hCCEEEeecccccccccC----ccchhhhcCCCCC-----CeeE-EcCcccc-C-CCCcceEEEEe--CchhHHhhhcC-
Q 048643 278 FGIWVHVDAAYAGSACIC----PEFQHFIDGVEGA-----DSFS-LNAHKWF-F-TTLDCCCLWVK--DPSALVSSLST- 342 (506)
Q Consensus 278 ~g~~lhVDaA~gg~~~~~----~~~~~~~~gi~~a-----Dsi~-~~~hK~l-~-~p~~~g~~~~r--~~~~l~~~~~~- 342 (506)
||+|+++|.+|+-...-. ........++..- ..++ .++.|.+ + ..+.+|++.+. +++. .+.+..
T Consensus 250 ~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~p~~l-i~~l~~~ 328 (481)
T PTZ00377 250 KGIVLMADEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGGYFELTNIPPEV-REQIYKL 328 (481)
T ss_pred CCCEEEEehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceEEEEEeCCCHHH-HHHHHHH
Confidence 999999999997543211 1111111111110 1343 4689975 4 46779988763 3332 233321
Q ss_pred CccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHh-----chhH---H----HHHHHHHHHHHHHHHHHHHcCC
Q 048643 343 NPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNY-----GVAN---L----RHFLRSHVNMAKLFERLVASDK 410 (506)
Q Consensus 343 ~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~-----G~~g---~----~~~i~~~~~~a~~l~~~l~~~~ 410 (506)
...++. . ..+.-.++...+ +... + +++.++..+..+.+.+.|++++
T Consensus 329 ~~~~~~-------------------~---~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~ 386 (481)
T PTZ00377 329 ASINLC-------------------S---NVVGQLMTGLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDELNKIE 386 (481)
T ss_pred hheecC-------------------C---ChHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 111110 0 111112222222 1111 2 2222334667888899998888
Q ss_pred CCc---c--ceEEE-eec-CCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeEC---CEEEEEEEecCCCCC
Q 048643 411 RVS---P--SAVMD-KLK-PKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCG---GIYAMRFAVGATLTE 480 (506)
Q Consensus 411 ~~~---p--~~v~f-~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~---g~~~lR~~~~~~~tt 480 (506)
+++ | +.+.| ++. +..... .............+...+.+.|+.++.+..+. +..++|+++. ++
T Consensus 387 g~~~~~p~gg~fl~~~~~l~~~~~~-----~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~F~~~~~~~~~Rls~~---~~ 458 (481)
T PTZ00377 387 GVSCQPVEGAMYAFPRIELPEKAIQ-----EAKERGLAPDVLYCLELLESTGIVVVPGSGFGQKPGTYHFRITIL---PP 458 (481)
T ss_pred CcEeecCCeeEEEEeeccCchhhHH-----HHHhcCCCcHHHHHHHHHHHcCEEEeCCcccCCCCCCCEEEEEEC---CC
Confidence 877 5 44444 332 110000 00000000001122344556677655544443 3468999995 56
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 048643 481 ERHVMVAWTMVQEQLEAF 498 (506)
Q Consensus 481 ~edi~~li~~l~~~~~~l 498 (506)
++++++.++.|.++.++.
T Consensus 459 ~e~l~~~l~rl~~~~~~~ 476 (481)
T PTZ00377 459 EEQIEEMVKKIKEFHESF 476 (481)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 789999999999887664
No 103
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.81 E-value=2.8e-17 Score=170.45 Aligned_cols=290 Identities=12% Similarity=0.091 Sum_probs=188.0
Q ss_pred HHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCC
Q 048643 135 NIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGID 214 (506)
Q Consensus 135 ~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g 214 (506)
.++.+.+++++|.+ ..++.++|++||..++..++.. .++.+|+.+...|.++..+++..|.
T Consensus 94 ~~l~~~la~~~g~~---------~~~~~~sG~~an~~ai~~l~~~---------~~~~~i~~~~~~h~s~~~~~~~~~~- 154 (407)
T PRK09064 94 VELERELADLHGKE---------AALVFTSGYVSNDATLSTLAKL---------IPDCVIFSDELNHASMIEGIRRSRC- 154 (407)
T ss_pred HHHHHHHHHHhCCC---------cEEEECcHHHHHHHHHHHHhCC---------CCCCEEEEeCcchHHHHHHHHHcCC-
Confidence 34445677777753 3467777889998888776432 0456777777889999888888887
Q ss_pred CCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeeccccccccc
Q 048643 215 LKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACI 294 (506)
Q Consensus 215 ~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~~ 294 (506)
.++.++. .|+++|++.++... ...+.+|+++...+++|.+.|+++|.++|++||++++||+||+.+.+
T Consensus 155 --~~~~~~~-------~d~~~le~~l~~~~--~~~~~~v~~~~v~s~~G~~~~l~~i~~l~~~~~~~livDEa~~~G~~- 222 (407)
T PRK09064 155 --EKHIFRH-------NDVAHLEELLAAAD--PDRPKLIAFESVYSMDGDIAPIAEICDLADKYNALTYLDEVHAVGMY- 222 (407)
T ss_pred --cEEEECC-------CCHHHHHHHHHhcc--CCCCeEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEECCCccccc-
Confidence 6666653 37889998886421 12355788888999999999999999999999999999999973322
Q ss_pred Cccchhh--hcCC-CCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhc-CCccccCCccccCCCccCCCCccccCCC-
Q 048643 295 CPEFQHF--IDGV-EGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLS-TNPEYLKNKATESKQVVDYKDWQITLSR- 369 (506)
Q Consensus 295 ~~~~~~~--~~gi-~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~-~~~~yl~~~~~~~~~~~~~~~~~~~~sr- 369 (506)
.+..... ..++ +..|.++.+++|.++.+ | |+++.+ +... +.+. ...+|.. ..+.
T Consensus 223 g~~g~g~~~~~~~~~~~div~~t~sKa~g~~-G-G~~~~~-~~~~-~~l~~~~~~~~~-----------------t~~~~ 281 (407)
T PRK09064 223 GPRGGGIAERDGLMDRIDIIEGTLAKAFGVM-G-GYIAGS-AALV-DAVRSYAPGFIF-----------------TTSLP 281 (407)
T ss_pred CCCCCChHHhcCCCCCCeEEEEecchhhhcc-C-ceEecC-HHHH-HHHHHhCccccc-----------------cCcCC
Confidence 1111111 1122 35688888999999764 2 555543 3322 2221 1112221 1111
Q ss_pred CCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c--ceEEEeecCCCcccccccccchHHHHHHHH
Q 048643 370 RFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS---P--SAVMDKLKPKYENCHSQQLVTEEEAINEFN 444 (506)
Q Consensus 370 ~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p--~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (506)
...+..+..+++.+... ....++..+++++|.+.|++. +++ + +++.+.+.. ....
T Consensus 282 ~~~~~aa~~al~~~~~~--~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~iv~i~~~~-----------------~~~~ 341 (407)
T PRK09064 282 PAIAAAALASIRHLKES--NEERERHQERAAKLKAALDAA-GIPVMPNESHIVPVMVGD-----------------PEKC 341 (407)
T ss_pred HHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHc-CCCCCCCCCCEEEEEeCC-----------------HHHH
Confidence 11223344555554332 334577888999999999886 666 2 667666532 1224
Q ss_pred HHHHHHHHhc-CcEEEeee----eECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 048643 445 RELLESINAS-GKAYMTHA----VCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAF 498 (506)
Q Consensus 445 ~~l~~~l~~~-g~~~~~~~----~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l 498 (506)
.++.++|.++ |+ ++.+. ...+..++|+++. ...+++||++++++|+++.+++
T Consensus 342 ~~l~~~L~~~~gi-~v~~~~~p~~~~~~~~lRis~~-~~~t~edi~~l~~~l~~~~~~~ 398 (407)
T PRK09064 342 KKASDMLLEEHGI-YVQPINYPTVPRGTERLRITPT-PFHTDEMIDHLVEALVEVWARL 398 (407)
T ss_pred HHHHHHHHHhCCE-EEeeECCCCCCCCCceEEEEeC-CCCCHHHHHHHHHHHHHHHHHc
Confidence 5677777654 65 44432 2235578999984 5667789999999999988765
No 104
>PRK15029 arginine decarboxylase; Provisional
Probab=99.81 E-value=2.4e-17 Score=177.97 Aligned_cols=234 Identities=13% Similarity=0.121 Sum_probs=166.8
Q ss_pred HHHHHHHHhcCCCCCCCCCCccccCCCCCCH-HHHHHHHH-----H-hhc-CCCCcccccChhhHHHHHHHHHHHHHHcC
Q 048643 75 ILQDVQEHIVPGVTHWQSPNYFAYFPSSGSI-AGFLGEML-----S-SGF-NVVGFNWISSPAATELENIVMDWLGQMLK 146 (506)
Q Consensus 75 il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~l-----~-~~~-n~~~~~~~~~p~~~~lE~~~~~~la~l~g 146 (506)
+++.|.+....+...|+-|.+.|-..-...+ .....+++ . ... .-.+...-..|.....|.+ +..|++||
T Consensus 142 l~~aL~~y~~~~~~~fH~PGHk~G~~~~~~~~~~~~~~f~G~~~~~~Dlt~ev~glD~L~~p~G~I~eAq--~~aA~~fg 219 (755)
T PRK15029 142 LFSALMKYSDIHEYSWAAPGHQGGVGFTKTPAGRFYHDYYGENLFRTDMGIERTSLGSLLDHTGAFGESE--KYAARVFG 219 (755)
T ss_pred HHHHHHHHHcCCCceeeCCCCCCCCCCCCCchhHHHHHHhccchhhccccccccCCCCCCCCCcHHHHHH--HHHHHHhC
Confidence 5556666666777788888776521100011 11122221 1 111 1112222344544555555 88999999
Q ss_pred CCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCC
Q 048643 147 LPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKS 226 (506)
Q Consensus 147 ~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~ 226 (506)
.+.++ ++++|+|.+|+.++.++.. ++..|+++..+|-|+..++.+.|+ ..++++...+
T Consensus 220 A~~t~--------FlvNGST~gn~a~i~a~~~-----------~gd~Vlv~RN~HKSv~~al~L~ga---~Pvyl~P~~~ 277 (755)
T PRK15029 220 ADRSW--------SVVVGTSGSNRTIMQACMT-----------DNDVVVVDRNCHKSIEQGLILTGA---KPVYMVPSRN 277 (755)
T ss_pred CCcEE--------EEeCChhHHHHHHHHHhcC-----------CCCEEEeecccHHHHHHHHHHcCC---eEEEeccccc
Confidence 99875 8899999999877776654 677899999999999999999999 8898865432
Q ss_pred CC---cccC-----HHHHHHHHHHHH----hcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeeccccccccc
Q 048643 227 SS---YGLS-----PDSLLTQINLDV----EAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACI 294 (506)
Q Consensus 227 ~~---~~~d-----~~~L~~~i~~~~----~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~~ 294 (506)
+. +.++ ++.++++|++.. +++.+|..|++|.+ |+.|.+-++++|+++|+++|+.+|||+|||+.+.+
T Consensus 278 ~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~P-TY~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F 356 (755)
T PRK15029 278 RYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARF 356 (755)
T ss_pred ccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECC-CCcceeeCHHHHHHHHHhcCCeEEEECcccccccc
Confidence 11 2445 999999997642 13457778888887 57899999999999999999999999999999988
Q ss_pred Cccchh--hhc----CCCCCC-eeEEcCccccCCCCcceEEEEeCc
Q 048643 295 CPEFQH--FID----GVEGAD-SFSLNAHKWFFTTLDCCCLWVKDP 333 (506)
Q Consensus 295 ~~~~~~--~~~----gi~~aD-si~~~~hK~l~~p~~~g~~~~r~~ 333 (506)
.+.++. .+. ...+|| .++.+.||+|.+--.++++.+++.
T Consensus 357 ~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~alTQaS~LHv~~~ 402 (755)
T PRK15029 357 NPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREG 402 (755)
T ss_pred CccccccccccccccccCCCceEEEEchhhcccchhhhhhheeCCC
Confidence 877653 121 113788 889999999999989999999765
No 105
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.80 E-value=4e-17 Score=178.73 Aligned_cols=360 Identities=13% Similarity=0.075 Sum_probs=225.3
Q ss_pred ChhHHhhhCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCccc--cC----CCCCC-HHHHHHHHHHhhcCCCCcccc
Q 048643 53 EPGYLRKRLPECAPYNPESMETILQDVQEHIVPGVTHWQSPNYFA--YF----PSSGS-IAGFLGEMLSSGFNVVGFNWI 125 (506)
Q Consensus 53 ~p~~l~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~--~~----~~~~~-~~~~~~~~l~~~~n~~~~~~~ 125 (506)
-|..++..-+..+|+ +.++.++++++.+....|.. ...|.| |. |+... ......+|++++ .+++....
T Consensus 30 iP~~i~~~~~l~lp~-~~sE~e~~~~~~~la~~N~~---~~~fig~G~y~~~~p~~i~r~v~~~p~~~Tay-tPyQ~Eis 104 (939)
T TIGR00461 30 VPPNILKRRPLQLEA-PSKEYEALAHLKKIASKNHK---FKSYIGMGYYGTILPPVIQRNLLENPGWYTAY-TPYQPEIS 104 (939)
T ss_pred CCHHHhcCCCCCCCC-CCCHHHHHHHHHHHHhcCCC---ccccCCCCcCCCcCChHHHHHHHhCchhhhcC-CCCChhhh
Confidence 466676555667777 56999999999987666643 223444 22 22222 222234566654 34444455
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHH
Q 048643 126 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQ 205 (506)
Q Consensus 126 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 205 (506)
++.+...+|.+ .++++|.|++.. +..+..++|.+.- |+.++.... ++ ++..|++++..|+...
T Consensus 105 QG~Le~l~e~Q--t~i~eLtGm~~a-------NaSl~d~atA~aE-a~~~a~~~~-~~------~~~~vlv~~~~hP~~~ 167 (939)
T TIGR00461 105 QGRLEALLNFQ--TVVSDLTGLPVA-------NASLLDEGTAAAE-AMALSFNVS-KK------KANKFFVAKDLHPQTK 167 (939)
T ss_pred hHHHHHHHHHH--HHHHHHHCCChh-------hhhccchhhHHHH-HHHHHHHhh-cC------CCCEEEECCCCCcchH
Confidence 66777777776 999999999976 6677887775443 444333211 00 3356889999998766
Q ss_pred HHH----HHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCE
Q 048643 206 KAA----QIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIW 281 (506)
Q Consensus 206 ka~----~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~ 281 (506)
... ...|+ +++.++ +++|++.+ + .+.|+++. .+.+|.+.|+++|++++|++|.+
T Consensus 168 ~v~~t~a~~~g~---~v~~~~----------~~~l~~~~--~------~~~v~~q~-Pn~~G~ied~~~i~~~~h~~gal 225 (939)
T TIGR00461 168 SVLHTRAKPFGI---EVIVVD----------CSDIKKAV--D------VFGCLLQY-PATDGSILDYKQLIDALHSHKSL 225 (939)
T ss_pred HHHHHHHHhcCc---EEEEEc----------HHHHhhcC--C------EEEEEEEC-CCCCeEEecHHHHHHHHHHcCCE
Confidence 443 46777 787774 23455544 2 23455554 46789999999999999999999
Q ss_pred EEeecccccccccCccchhhhcCCCCCCeeEEcCccccC-----CCCcceEEEEeCchhHHhhhcCCccccCCccccCCC
Q 048643 282 VHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFF-----TTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQ 356 (506)
Q Consensus 282 lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~-----~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~ 356 (506)
+.|++-.-...++.+ .... +||.+..+.++|+. .|. .|++.+|+. +.+. .|+-+.....+..+
T Consensus 226 ~~~~ad~~al~ll~~-Pge~-----GaDi~vg~~q~fg~p~g~GGP~-aG~~a~~~~--l~r~---lPgrivG~s~D~~G 293 (939)
T TIGR00461 226 VSVAADLMALTLLTP-PGHY-----GADIVLGSSQRFGVPMGYGGPH-AAFFAVKDE--YNRK---MPGRIVGVSKDALG 293 (939)
T ss_pred EEEEechHHhCCcCC-HHHc-----CCcEEeeCCCccCCCCCCCCCc-eeeeeecHh--hHhh---CCCCceeEEecCCC
Confidence 999553322222222 2222 89999665555554 343 888988874 2222 23333221111111
Q ss_pred ccCCCC--ccc-cCCCCCCc------------hHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc----c--c
Q 048643 357 VVDYKD--WQI-TLSRRFRS------------LKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS----P--S 415 (506)
Q Consensus 357 ~~~~~~--~~~-~~sr~~~a------------l~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~----p--~ 415 (506)
...+.- .+- +.-||-.| +...+++..+|.+|++++.++...++.+|++.|++ .|++ | .
T Consensus 294 ~~~~~l~LqtReqhIrRekAtSNICt~qaL~a~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~-~G~~~~~~~fF~ 372 (939)
T TIGR00461 294 NTALRLALQTREQHIRRDKATSNICTAQVLLANVASSYCVYHGPKGLKNIARRIHSLTSILANGLEN-DPHELINKTWFD 372 (939)
T ss_pred CccceeecccccccccccccCcchhHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHh-CCCcccCCCccc
Confidence 111110 111 23344332 22344477889999999999999999999999999 4888 3 5
Q ss_pred eEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHH
Q 048643 416 AVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQ 492 (506)
Q Consensus 416 ~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~ 492 (506)
.+.+++... ..+++.+++.++|+. +.. .....+++|+. ..+|++||+.+++.+.
T Consensus 373 ~~~v~~~~~------------------~~~~i~~~~~~~gi~-l~~---~~~~~i~~s~~-E~~t~~di~~l~~~~~ 426 (939)
T TIGR00461 373 TLTVKVGNG------------------ISSELLKAAEEFNIN-LRA---VDTTTVGIALD-ETTTKADVENLLKVFD 426 (939)
T ss_pred eEEEEeCCC------------------CHHHHHHHHHHCCCe-eee---cCCCEEEEEee-cCCCHHHHHHHHHHhc
Confidence 666666311 135677778888875 332 22347999995 6778889999999994
No 106
>PLN02187 rooty/superroot1
Probab=99.80 E-value=6.7e-17 Score=169.54 Aligned_cols=319 Identities=11% Similarity=0.078 Sum_probs=205.3
Q ss_pred cccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCc
Q 048643 122 FNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTH 201 (506)
Q Consensus 122 ~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H 201 (506)
..|...++..++.+.+.+|+.+.+|++.+. ...++|+|+++++..++.+..+ ++..|+++..++
T Consensus 102 ~~Y~~~~G~~~lR~aiA~~~~~~~~~~~~~-----~~I~it~G~~~al~~~~~~l~~-----------pGd~Vlv~~P~y 165 (462)
T PLN02187 102 NSYGPGAGILPARRAVADYMNRDLPHKLTP-----EDIFLTAGCNQGIEIVFESLAR-----------PNANILLPRPGF 165 (462)
T ss_pred CCCCCCCChHHHHHHHHHHHHHhcCCCCCc-----ccEEEeCCHHHHHHHHHHHhcC-----------CCCEEEEeCCCC
Confidence 356566677889999999998877764332 3788999999988777665533 667788888999
Q ss_pred hHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC---hhHHHHHHHHh
Q 048643 202 CALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP---LKPLCDVAKQF 278 (506)
Q Consensus 202 ~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp---l~~I~~ia~~~ 278 (506)
+.+...++..|+ +++.++..+++++.+|+++|++++++. +.+|+++.++|+||.+-+ +++|+++|++|
T Consensus 166 ~~y~~~~~~~g~---~~~~~~l~~~~~~~~d~~~l~~~~~~~------~~~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~ 236 (462)
T PLN02187 166 PHYDARAAYSGL---EVRKFDLLPEKEWEIDLEGIEAIADEN------TVAMVVINPNNPCGNVYSHDHLKKVAETARKL 236 (462)
T ss_pred ccHHHHHHHcCC---EEEEEeCccccCCccCHHHHHHhcCCC------cEEEEEeCCCCCCCCccCHHHHHHHHHHHHHC
Confidence 988888999999 999999865456899999999887543 337888889999999965 88999999999
Q ss_pred CCEEEeecccccccccCccchhhhcCCC-CCCeeE-EcCccccCCC-CcceEEEEeCchhHH---hhhcCCccccCCccc
Q 048643 279 GIWVHVDAAYAGSACICPEFQHFIDGVE-GADSFS-LNAHKWFFTT-LDCCCLWVKDPSALV---SSLSTNPEYLKNKAT 352 (506)
Q Consensus 279 g~~lhVDaA~gg~~~~~~~~~~~~~gi~-~aDsi~-~~~hK~l~~p-~~~g~~~~r~~~~l~---~~~~~~~~yl~~~~~ 352 (506)
|+|+++|.+|+....-.+.+... ..+. ....++ .++.|.++.| +-+|+++..++.... +.+.....+.
T Consensus 237 ~i~iI~DE~Y~~l~f~~~~~~s~-~~~~~~~~vi~l~SfSK~f~~pGlRiG~~v~~~p~~~~~~~~~~~~~~~~~----- 310 (462)
T PLN02187 237 GIMVISDEVYDRTIFGDNPFVSM-GKFASIVPVLTLAGISKGWVVPGWKIGWIALNDPEGVFETTKVLQSIKQNL----- 310 (462)
T ss_pred CCEEEEeccccccccCCCCceeH-HHhccCCcEEEEecchhhcCCccceeEEEEecCchhHHHHHHHHHHHHHhc-----
Confidence 99999999997644321111111 1111 112344 4689996654 779998875543211 1121100010
Q ss_pred cCCCccCCCCccccCCCCCCchHHHHHHHHh---chhHHHHHHHHHHHHHHHHHHHHHcCCCCc----c--ceEEE-eec
Q 048643 353 ESKQVVDYKDWQITLSRRFRSLKLWLVIRNY---GVANLRHFLRSHVNMAKLFERLVASDKRVS----P--SAVMD-KLK 422 (506)
Q Consensus 353 ~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~---G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~----p--~~v~f-~~~ 422 (506)
.+..+ ...+..+++...+ ..+.++++.+...+..+++.+.|++++.+. | ..+.| ++.
T Consensus 311 -----------~~~~~--~s~~~Q~a~~~~L~~~~~~~l~~~~~~l~~~r~~l~~~L~~~~~~~~~~~P~gg~fl~~~l~ 377 (462)
T PLN02187 311 -----------DVTPD--PATIIQAALPAILEKADKNFFAKKNKILKHNVDLVCDRLKDIPCVVCPKKPESCTYLLTKLE 377 (462)
T ss_pred -----------cccCC--CCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCCCCCEeEEEEeecC
Confidence 00000 0112222333333 345677788888888999999999886542 5 23333 332
Q ss_pred CCCcccccccccchHHHHHHHHHHHH-HHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 048643 423 PKYENCHSQQLVTEEEAINEFNRELL-ESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAFL 499 (506)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~l~-~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l~ 499 (506)
.... .... ...++. +.+.+.|+.+..+..+...+++|++++. .++.++..++.|.++.++..
T Consensus 378 ~~~~-----------~~~~-~~~~~~~~ll~~~gV~v~pG~~fg~~~~iRis~~~---~~e~l~~al~rL~~~l~~~~ 440 (462)
T PLN02187 378 LSLM-----------DNIK-DDIDFCVKLAREENLVFLPGDALGLKNWMRITIGV---EAHMLEDALERLKGFCTRHA 440 (462)
T ss_pred hhhC-----------CCCC-CHHHHHHHHHhhCCEEEECccccCCCCeEEEEeCC---CHHHHHHHHHHHHHHHHHhh
Confidence 1100 0000 012333 3445667655544444456799999964 57789999999998876654
No 107
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.80 E-value=3e-18 Score=174.17 Aligned_cols=304 Identities=12% Similarity=0.029 Sum_probs=193.8
Q ss_pred ccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEE-cCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCch-
Q 048643 125 ISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVI-QGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHC- 202 (506)
Q Consensus 125 ~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~-t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~- 202 (506)
..++.+.++-+++.+.+++++|.+++. ..+| +++||.++..++...... +..++ +.-.|.
T Consensus 34 hr~~~f~~~~~~~r~~l~~l~~~~~~~------~v~f~~gs~T~a~~~~~~~l~~~----------~~l~i--~~G~~~~ 95 (361)
T TIGR01366 34 HRQAPVKNLVGRVREGLAELFSLPDGY------EVILGNGGATAFWDAATFGLIEK----------KSLHL--SFGEFSS 95 (361)
T ss_pred cCChHHHHHHHHHHHHHHHHhCCCCCc------eEEEECCchhHHHHHHHHhcccc----------cccEE--ecCHHHH
Confidence 346777888899999999999997543 5666 467898887666443210 22233 223333
Q ss_pred HHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEE
Q 048643 203 ALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWV 282 (506)
Q Consensus 203 s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~l 282 (506)
.+.+.+....... +++.+++++.+ .++. .+.+ .+.+|++++.+|.+|.+.|+++| ++++|+.+
T Consensus 96 ~~~~~a~~~~~~~-~~~~~~~~~~~--~~~~-----~~~~------~~~lV~~~h~et~tG~~~pi~~I---~~~~g~~~ 158 (361)
T TIGR01366 96 KFAKAVKLAPWLG-EPIIVTADPGS--APEP-----QADP------GVDVIAWAHNETSTGVAVPVRRP---EGSDDALV 158 (361)
T ss_pred HHHHHHHhhhccC-CceEEecCCCC--CCCC-----ccCC------CCCEEEEcccCCccceecccccc---cccCCCeE
Confidence 3445555432211 57777776422 3333 2222 34589999999999999999998 58999999
Q ss_pred EeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhc--CC----ccccCCccccCCC
Q 048643 283 HVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLS--TN----PEYLKNKATESKQ 356 (506)
Q Consensus 283 hVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~--~~----~~yl~~~~~~~~~ 356 (506)
+||++.+.+....+- +.+|.+++++|||++.|.|.++++++++.. .+... .. +.|+....
T Consensus 159 iVDavqs~g~~~idv--------~~~D~~~~s~~K~lg~~~Gl~~~~~s~~~~-~~~~~~~~~~~~~p~~~d~~~----- 224 (361)
T TIGR01366 159 VIDATSGAGGLPVDI--------AETDVYYFAPQKNFASDGGLWLAIMSPAAL-ERIEAIAASGRWVPEFLSLPT----- 224 (361)
T ss_pred EEEcCccccCCCCCH--------HHCCEEEEEchhhcCCCCceEEEEECHHHH-hhhhcccCCCCCCchhhhHHH-----
Confidence 999999888776652 148999999999999997877777776533 11110 00 11221100
Q ss_pred ccCCCCccccCCCCC-----CchHHHHHHHHhchh-HHHHHHHHHHHHHHHHHHHHHcCCCCc-----c-----ceEEEe
Q 048643 357 VVDYKDWQITLSRRF-----RSLKLWLVIRNYGVA-NLRHFLRSHVNMAKLFERLVASDKRVS-----P-----SAVMDK 420 (506)
Q Consensus 357 ~~~~~~~~~~~sr~~-----~al~~~~~l~~~G~~-g~~~~i~~~~~~a~~l~~~l~~~~~~~-----p-----~~v~f~ 420 (506)
+.....+..... ..+.+-.+++.+-.+ |++.+.+++.++++++++.+.+.+.++ + .+.+|.
T Consensus 225 ---~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~v~~v~ 301 (361)
T TIGR01366 225 ---AVDNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQERPYATPFVTDPGKRSQVVGTID 301 (361)
T ss_pred ---HHhccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcccceEEEE
Confidence 000001111111 113566777777666 699999999999999999999987554 1 123344
Q ss_pred ecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 048643 421 LKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAF 498 (506)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l 498 (506)
+. .+ ....++.+.|.++|+....+...-+...+|+++++ .+|++||++++++|+++.+++
T Consensus 302 ~~-~g----------------~~~~~v~~~L~~~gI~i~~~~~~l~~~~vRis~~~-~~t~~di~~l~~al~~~~~~~ 361 (361)
T TIGR01366 302 FV-DD----------------IDAATVAKILRANGIVDTEPYRKLGRNQLRVAMFP-AIDPDDVEALTECVDWVVERL 361 (361)
T ss_pred CC-Cc----------------cCHHHHHHHHHHCCCeeccCccccCCCcEEEEcCC-CCCHHHHHHHHHHHHHHHhhC
Confidence 42 21 11345667776777754222111134589999975 677889999999999987654
No 108
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.80 E-value=4.2e-17 Score=173.90 Aligned_cols=315 Identities=10% Similarity=0.013 Sum_probs=199.7
Q ss_pred cccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCc
Q 048643 122 FNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTH 201 (506)
Q Consensus 122 ~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H 201 (506)
..|....+..++.+.+.+|+.+..+...+ ....++|+|+++++..++.+..+ ++..|+++...+
T Consensus 179 ~~Y~~~~G~~~lReaia~~~~~~~~~~~~-----~~~I~it~G~~eal~~~~~~l~~-----------~Gd~Vli~~P~y 242 (517)
T PRK13355 179 EGYSDSKGLFSARKAIMQYAQLKGLPNVD-----VDDIYTGNGVSELINLSMSALLD-----------DGDEVLIPSPDY 242 (517)
T ss_pred CCCCCCcChHHHHHHHHHHHHhcCCCCCC-----hhHEEEeCcHHHHHHHHHHHhCC-----------CCCEEEEcCCCC
Confidence 35666666788999999998765443221 12789999999988777665433 567788899999
Q ss_pred hHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC---hhHHHHHHHHh
Q 048643 202 CALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP---LKPLCDVAKQF 278 (506)
Q Consensus 202 ~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp---l~~I~~ia~~~ 278 (506)
..+...++..|. +++.++++++++|.+|+++|++++.+.+ .+|+++.++|+||.+-+ +++|+++|++|
T Consensus 243 ~~y~~~~~~~g~---~~v~~~~~~~~~~~~d~~~l~~~~~~~~------k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~ 313 (517)
T PRK13355 243 PLWTACVNLAGG---TAVHYRCDEQSEWYPDIDDIRSKITSRT------KAIVIINPNNPTGALYPREVLQQIVDIAREH 313 (517)
T ss_pred cCHHHHHHHCCC---EEEEeecCcccCCCCCHHHHHHhcCcCc------eEEEEECCCCCCCcCcCHHHHHHHHHHHHHc
Confidence 999999999999 9999999876678999999999886543 37888899999999976 89999999999
Q ss_pred CCEEEeecccccccccCccchhhhcCCCCCCeeE-EcCccccC-CCCcceEEEEe-Cchh---HHhhhcCCccccCCccc
Q 048643 279 GIWVHVDAAYAGSACICPEFQHFIDGVEGADSFS-LNAHKWFF-TTLDCCCLWVK-DPSA---LVSSLSTNPEYLKNKAT 352 (506)
Q Consensus 279 g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~-~~~hK~l~-~p~~~g~~~~r-~~~~---l~~~~~~~~~yl~~~~~ 352 (506)
++|+++|.+|.-...-...+.....-....-.++ .++.|.++ ..+-+|++++. +... +...+.... ...
T Consensus 314 ~~~ii~DE~Y~~~~~~~~~~~s~~~~~~~~~vi~~~S~SK~~~~~G~RiG~~i~~~~~~~~~~~~~~l~~~~-~~~---- 388 (517)
T PRK13355 314 QLIIFSDEIYDRLVMDGLEHTSIASLAPDLFCVTFSGLSKSHMIAGYRIGWMILSGNKRIAKDYIEGLNMLA-NMR---- 388 (517)
T ss_pred CcEEEEehhhhhhcCCCCCcccHHHhCCCCeEEEEecchhhccCcccceEEEEeeCchhhHHHHHHHHHHHh-cCc----
Confidence 9999999999754321111111111111222343 35789875 45778998764 3321 111111000 000
Q ss_pred cCCCccCCCCccccCCCCCCchHHHHHHHHhch-hHHHHH---HHHHHHHHHHHHHHHHcCCCCc---c--ceEEE-eec
Q 048643 353 ESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGV-ANLRHF---LRSHVNMAKLFERLVASDKRVS---P--SAVMD-KLK 422 (506)
Q Consensus 353 ~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~-~g~~~~---i~~~~~~a~~l~~~l~~~~~~~---p--~~v~f-~~~ 422 (506)
.+ ...+..+++...+.. +.+.+. .++..+..+++.+.|+++|+++ | +.++| ++.
T Consensus 389 -------------~~---~~~~~q~a~~~aL~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~g~fy~~~~l~ 452 (517)
T PRK13355 389 -------------LC---SNVPAQSIVQTALGGHQSVKDYLVPGGRVYEQRELVYNALNAIPGISAVKPKAAFYIFPKID 452 (517)
T ss_pred -------------CC---cChHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCeeeEEEeecC
Confidence 00 122333444444421 112222 2345566788999999888877 5 55555 443
Q ss_pred CCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeEC--CEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 048643 423 PKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCG--GIYAMRFAVGATLTEERHVMVAWTMVQEQLEA 497 (506)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~ 497 (506)
.... .. ......+.+.|.+.|+.++.+..+. +..++|+++. .++++|++.++.|.++.++
T Consensus 453 ~~~~-------~~-----~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~Ris~~---~~~~~l~~a~~rl~~~~~~ 514 (517)
T PRK13355 453 VKKF-------NI-----HDDEQFALDLLHDKKVLIVQGTGFNWDKPDHFRVVYL---PRLEDLEDAMDRLADFFSY 514 (517)
T ss_pred cccC-------CC-----CCHHHHHHHHHHhCCEEEeCcchhCCCCcCEEEEEeC---CCHHHHHHHHHHHHHHHHH
Confidence 2100 00 0011233445566777655544442 4679999984 4777888888888887654
No 109
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.80 E-value=7.3e-18 Score=172.05 Aligned_cols=312 Identities=15% Similarity=0.132 Sum_probs=207.9
Q ss_pred CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCC
Q 048643 121 GFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQT 200 (506)
Q Consensus 121 ~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~ 200 (506)
...|....+...+++.+.+|+.+-.|++.+. ...+++++|+.+.+..+..+... .++..|+++..+
T Consensus 37 ~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~-----~~~i~~~~G~~~~~~~~~~~~~~---------~~~~~vlv~~P~ 102 (363)
T PF00155_consen 37 FLGYPPPQGYPELREAIADFLGRRYGVPVDP-----EANILVTSGAQAALFLLLRLLKI---------NPGDTVLVPDPC 102 (363)
T ss_dssp CTSSTCTTHHHHHHHHHHHHHHHHHTHHTTG-----GEGEEEESHHHHHHHHHHHHHHS---------STTSEEEEEESS
T ss_pred cccCCCchhhHHHHHHHHHHhhhccCccccc-----ceEEEEecccccchhhhhhcccc---------cccccceecCCc
Confidence 4466666778999999999999777766543 21455555666665554444320 156678889999
Q ss_pred chHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC---hhHHHHHHHH
Q 048643 201 HCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP---LKPLCDVAKQ 277 (506)
Q Consensus 201 H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp---l~~I~~ia~~ 277 (506)
|..+...++..|+ +++.+|++..+++.+|+++|++.+++...++..+.+|+.+.++++||.+-+ +++|+++|++
T Consensus 103 y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~ 179 (363)
T PF00155_consen 103 YPSYIEAARLLGA---EVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPTGSVLSLEELRELAELARE 179 (363)
T ss_dssp STHHHHHHHHTTS---EEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTTTBB--HHHHHHHHHHHHH
T ss_pred cccccccccccCc---eeeeccccccccccccccccccccccccccccccceeeecccccccccccccccccchhhhhcc
Confidence 9999999999999 999999865557899999999999986655434567888999999998855 5555666999
Q ss_pred hCCEEEeecccccccccCccchhhhcCCC-CC-CeeEEcCccccCCC-CcceEEEEeCchhHHhhhcC-CccccCCcccc
Q 048643 278 FGIWVHVDAAYAGSACICPEFQHFIDGVE-GA-DSFSLNAHKWFFTT-LDCCCLWVKDPSALVSSLST-NPEYLKNKATE 353 (506)
Q Consensus 278 ~g~~lhVDaA~gg~~~~~~~~~~~~~gi~-~a-Dsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~-~~~yl~~~~~~ 353 (506)
||+|+++|.+|+.+....+........++ .. ..+..++.|.++.| ...|++++ ++... +.+.. ...+...
T Consensus 180 ~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRvG~i~~-~~~~~-~~l~~~~~~~~~~---- 253 (363)
T PF00155_consen 180 YNIIIIVDEAYSDLIFGDPDFGPIRSLLDEDDNVIVVGSLSKSFGLPGLRVGYIVA-PPELI-ERLRRFQRSGLSS---- 253 (363)
T ss_dssp TTSEEEEEETTTTGBSSSSHTHHHHGHHTTTSTEEEEEESTTTTTSGGGTEEEEEE-EHHHH-HHHHHHHHHTTSS----
T ss_pred cccceeeeeceeccccCCCccCcccccccccccceeeeeccccccccccccccccc-hhhhh-hhhhhcccccccc----
Confidence 99999999999876654332211111111 22 36777899998866 56788888 43332 23321 1111100
Q ss_pred CCCccCCCCccccCCCCCCchHHHHHHHHhc--hhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c--ceEEEeecCCCc
Q 048643 354 SKQVVDYKDWQITLSRRFRSLKLWLVIRNYG--VANLRHFLRSHVNMAKLFERLVASDKRVS---P--SAVMDKLKPKYE 426 (506)
Q Consensus 354 ~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G--~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p--~~v~f~~~~~~~ 426 (506)
......+...+...+ .+.++++.++..++++++.+.|++. ++. | +++++...+.
T Consensus 254 ----------------~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~-- 314 (363)
T PF00155_consen 254 ----------------SPMQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEEI-GITVLPPEAGFFLWVRLDP-- 314 (363)
T ss_dssp ----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TSEEEHHSBSSEEEEEESH--
T ss_pred ----------------chhhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHh-hhheeeccCccEEEEEccc--
Confidence 001111222222222 2267888899999999999999888 777 3 6666654332
Q ss_pred ccccccccchHHHHHHHHHHHHHHHHhc-CcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHH
Q 048643 427 NCHSQQLVTEEEAINEFNRELLESINAS-GKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMV 491 (506)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l 491 (506)
. ...++.+.|.++ |+....+..+....++|+++ ...+++++++++++|
T Consensus 315 --------------~-~~~~l~~~L~~~~gi~v~pg~~~~~~~~iRi~~--a~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 315 --------------N-DAEELAQELLEEYGILVRPGSYFGVPGYIRISL--ASHSEEDLEEALERL 363 (363)
T ss_dssp --------------H-HHHHHHHHHHHHHTEEEEEGGGGTSTTEEEEEG--GCSCHHHHHHHHHHH
T ss_pred --------------c-hHHHHHHHHHHhCCEEEEecCCCCCCCEEEEEe--ccCCHHHHHHHHhhC
Confidence 1 346677778777 87655444444467899999 345778999999876
No 110
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.80 E-value=3.7e-18 Score=172.40 Aligned_cols=302 Identities=12% Similarity=0.043 Sum_probs=197.4
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEc-CCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHH
Q 048643 126 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQ-GTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCAL 204 (506)
Q Consensus 126 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t-~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~ 204 (506)
.++.+.++-+++.+.+++++|.+.+. ..+++ ++||+|+-.++..... .+.+.+++.++...|..
T Consensus 31 r~~~f~~~~~~~~~~l~~l~~~~~~~------~v~~~~gsgT~a~ea~~~nl~~--------~~~~~l~i~~G~fg~r~- 95 (349)
T TIGR01364 31 RSKEFEAVANEAESDLRELLNIPDNY------EVLFLQGGATGQFAAVPLNLLA--------EGKVADYIVTGAWSKKA- 95 (349)
T ss_pred CchHHHHHHHHHHHHHHHHhCCCCCc------eEEEEcCCchHHHHHHHHhcCC--------CCCeEEEEECCHHHHHH-
Confidence 34556688889999999999986543 45555 5599888666554321 11133455555555544
Q ss_pred HHHHHHhCCCCCCeEEEecCCCC--CcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEE
Q 048643 205 QKAAQIVGIDLKNFRAIKTTKSS--SYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWV 282 (506)
Q Consensus 205 ~ka~~~~G~g~~~v~~v~~~~~~--~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~l 282 (506)
.+.++.+|+ +..+..++.. .-..|++.++. .+ .+.+|.+++..|.||...| ++++.+++.+
T Consensus 96 ~~~a~~~g~----~~~~~~~~~~~~~~~~~~~~~~~--~~------~~~~v~~th~ETstGv~~~-----~l~~~~~~l~ 158 (349)
T TIGR01364 96 AKEAKKYGV----VNVVASGKEGNYTKIPDPSTWEI--SE------DAAYVHYCANETIHGVEFR-----ELPDVKNAPL 158 (349)
T ss_pred HHHHHHhCC----cEEEeccccCCCCCCCCHHhcCC--CC------CCCEEEEcCCCCcccEecc-----eecccCCCeE
Confidence 566777776 3444432111 11456665542 11 2458999999999999876 6677789999
Q ss_pred EeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCC
Q 048643 283 HVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKD 362 (506)
Q Consensus 283 hVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~ 362 (506)
+||++.+.+....+-- ..|.+.+++||+++ |.|.|+++++++..- +.-...+.|..... ....
T Consensus 159 iVDavss~g~~~id~~--------~~d~~~~ssqK~lg-P~Glg~l~~s~~~~~-~~~~~~~~~~~~~~-------~~~~ 221 (349)
T TIGR01364 159 VADMSSNILSRPIDVS--------KFGLIYAGAQKNIG-PAGLTVVIVRKDLLG-RASRITPSMLNYKI-------HAEN 221 (349)
T ss_pred EEEccccccCccCCHH--------HccEEEEecccccC-CCceEEEEECHHHHh-hcccCCCCcchHHH-------HHhc
Confidence 9999998877766421 35699999999986 999999999876432 11111111211000 0000
Q ss_pred ccccCCCC-CCchHHHHHHHHhchh-HHHHHHHHHHHHHHHHHHHHHcCCCCc-----c-----ceEEEeecCCCccccc
Q 048643 363 WQITLSRR-FRSLKLWLVIRNYGVA-NLRHFLRSHVNMAKLFERLVASDKRVS-----P-----SAVMDKLKPKYENCHS 430 (506)
Q Consensus 363 ~~~~~sr~-~~al~~~~~l~~~G~~-g~~~~i~~~~~~a~~l~~~l~~~~~~~-----p-----~~v~f~~~~~~~~~~~ 430 (506)
....++-. .....+..+|+.+-.+ |++++.+++.++++++++.|++++++. | .+++|.+.+.
T Consensus 222 ~~~~~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~v~sf~~~~~------ 295 (349)
T TIGR01364 222 DSMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMNVVFTLGNE------ 295 (349)
T ss_pred CCCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcCCeEEEEecCCh------
Confidence 01111222 2335677788888788 799999999999999999999998774 2 3577876432
Q ss_pred ccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 048643 431 QQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLE 496 (506)
Q Consensus 431 ~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~ 496 (506)
.+..++++.+.++|. ++..... ..+.+|+|++ +.+++|||++|+++|+++.+
T Consensus 296 -----------~~~~~~~~~~~~~Gi-~~~~~~~-~~g~vRvS~~-~~nt~edid~l~~al~~~~~ 347 (349)
T TIGR01364 296 -----------ELEKRFLKEAEERGL-VSLKGHR-SVGGMRASIY-NAMPLEGVQALVDFMKEFQK 347 (349)
T ss_pred -----------hHhHHHHHHHHHCCC-cccCCcc-ccCeeEEECc-CCCCHHHHHHHHHHHHHHHH
Confidence 123566677788898 4444322 1248999995 56677899999999998764
No 111
>PLN02231 alanine transaminase
Probab=99.80 E-value=2.4e-16 Score=167.39 Aligned_cols=328 Identities=13% Similarity=0.118 Sum_probs=211.9
Q ss_pred CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCC
Q 048643 121 GFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQT 200 (506)
Q Consensus 121 ~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~ 200 (506)
...|..+.+..++.+.+.+|+.+..|++.+. ...++|+|+++++..++.+.... ++..|+++...
T Consensus 161 ~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~p-----e~I~iT~Ga~~ai~~~~~~l~~~----------~gd~Vli~~P~ 225 (534)
T PLN02231 161 TGAYSHSQGIKGLRDAIAAGIEARDGFPADP-----NDIFLTDGASPAVHMMMQLLIRS----------EKDGILCPIPQ 225 (534)
T ss_pred ccCcCCCCCcHHHHHHHHHHHHhccCCCCCc-----ccEEEeCCHHHHHHHHHHHhccC----------CCCEEEEeCCC
Confidence 3557777888999999999999988876442 37899999999888777665431 45678889999
Q ss_pred chHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc---cChhHHHHHHHH
Q 048643 201 HCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV---DPLKPLCDVAKQ 277 (506)
Q Consensus 201 H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i---dpl~~I~~ia~~ 277 (506)
+.....+++..|. +++.++++++++|.+|+++|++++++....+..+.+++++.++|+||.+ +.+++|+++|++
T Consensus 226 Y~~y~~~~~~~g~---~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG~vls~e~l~~Iv~~a~~ 302 (534)
T PLN02231 226 YPLYSASIALHGG---TLVPYYLDEATGWGLEISELKKQLEDARSKGITVRALVVINPGNPTGQVLAEENQRDIVEFCKQ 302 (534)
T ss_pred ChhHHHHHHHcCC---EEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEEEeCCCCCCCcCCCHHHHHHHHHHHHH
Confidence 9999999999999 9999999865568999999999998766555566677888999999999 457899999999
Q ss_pred hCCEEEeecccccccccC-c---cchhhhc--CC--CCCCeeEE-cCccccC--CCCcceEEEEe--CchhHHhhhcCCc
Q 048643 278 FGIWVHVDAAYAGSACIC-P---EFQHFID--GV--EGADSFSL-NAHKWFF--TTLDCCCLWVK--DPSALVSSLSTNP 344 (506)
Q Consensus 278 ~g~~lhVDaA~gg~~~~~-~---~~~~~~~--gi--~~aDsi~~-~~hK~l~--~p~~~g~~~~r--~~~~l~~~~~~~~ 344 (506)
||+|+++|.+|.-...-. + .+..... |. .....+++ +..|.++ +..-+|++.+. ++... +.+....
T Consensus 303 ~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRiGy~~~~~~~~~l~-~~l~k~~ 381 (534)
T PLN02231 303 EGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFTSDVR-EQIYKVA 381 (534)
T ss_pred cCCEEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCcccccCCccceEEEEEecCCHHHH-HHHHHHH
Confidence 999999999997654311 1 1111111 11 01123444 6889653 55778988764 33332 2221100
Q ss_pred cccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHh-----chhHH-------HHHHHHHHHHHHHHHHHHHcCCCC
Q 048643 345 EYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNY-----GVANL-------RHFLRSHVNMAKLFERLVASDKRV 412 (506)
Q Consensus 345 ~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~-----G~~g~-------~~~i~~~~~~a~~l~~~l~~~~~~ 412 (506)
. .. .|+. .+.-.++...+ |...| .++.+...+.++++.+.|++++++
T Consensus 382 ~-~~-----------------~~s~---~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~~~~gi 440 (534)
T PLN02231 382 S-VN-----------------LCSN---ISGQILASLVMSPPKPGDESYESYMAEKDGILSSLARRAKTLEDALNSLEGV 440 (534)
T ss_pred h-hh-----------------cCCC---hHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 0 00 0111 11111111111 12222 234567778889999999998888
Q ss_pred c---c--ceEEE-eec-CCCcccccccccchHHH-HH-HHHHHHHHHHH-hcCcEEEeeeeEC---CEEEEEEEecCCCC
Q 048643 413 S---P--SAVMD-KLK-PKYENCHSQQLVTEEEA-IN-EFNRELLESIN-ASGKAYMTHAVCG---GIYAMRFAVGATLT 479 (506)
Q Consensus 413 ~---p--~~v~f-~~~-~~~~~~~~~~~~~~~~~-~~-~~~~~l~~~l~-~~g~~~~~~~~~~---g~~~lR~~~~~~~t 479 (506)
+ | +.+.| ++. +.. ..+... .. .....+...+. +.|++++.+..+. |..++|+++. +
T Consensus 441 ~~~~p~Ggfylw~~l~lp~~--------~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~~~g~~~~Rit~~---~ 509 (534)
T PLN02231 441 TCNKAEGAMYLFPRIHLPQK--------AIKAAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQVPGTWHFRCTIL---P 509 (534)
T ss_pred eecCCCeeeEEeccccCcHH--------HHHHHhhcCCCcHHHHHHHHHHhcCEEEeCCcccCCCCCCCeEEEEeC---C
Confidence 7 5 55555 232 110 000000 00 00123444444 4577666555442 3557999984 4
Q ss_pred CHHHHHHHHHHHHHHHHHHH
Q 048643 480 EERHVMVAWTMVQEQLEAFL 499 (506)
Q Consensus 480 t~edi~~li~~l~~~~~~l~ 499 (506)
++++|+..++.|.++.+++.
T Consensus 510 ~~e~l~eal~RL~~~~~~~~ 529 (534)
T PLN02231 510 QEDKIPAIVSRLTEFHKSFM 529 (534)
T ss_pred CHHHHHHHHHHHHHHHHHHH
Confidence 77899999999988877653
No 112
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.80 E-value=1e-16 Score=164.92 Aligned_cols=298 Identities=10% Similarity=0.022 Sum_probs=190.3
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHH
Q 048643 127 SPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQK 206 (506)
Q Consensus 127 ~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~k 206 (506)
..+...+..++.+++++++|.+. . ++.++|+++++.++.+..+ ++.+|+++...|.++..
T Consensus 73 ~~g~~~l~~~l~~~l~~~~g~~~--------~-i~~~sG~~a~~~a~~~~~~-----------~gd~vi~~~~~~~~~~~ 132 (385)
T TIGR01825 73 IAGTLRLHEELEEKLAKFKKTEA--------A-LVFQSGFNTNQGVLSALLR-----------KGDIVLSDELNHASIID 132 (385)
T ss_pred ccCCcHHHHHHHHHHHHHhCCCc--------E-EEECcHHHHHHHHHHHhCC-----------CCCEEEEEccccHHHHH
Confidence 34456778888899999998642 3 4445558888877665432 55678888899999998
Q ss_pred HHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeec
Q 048643 207 AAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDA 286 (506)
Q Consensus 207 a~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDa 286 (506)
++...|. +++.++ .+|++++++.+.+... .++.+|+.....+++|.+.|+++|+++|++||+|+++|+
T Consensus 133 ~~~~~g~---~~~~~~-------~~d~~~l~~~l~~~~~--~~~~~v~~~~v~~~tG~~~~~~~i~~l~~~~~~~li~De 200 (385)
T TIGR01825 133 GLRLTKA---TKKIYK-------HADMDDLDRVLRENPS--YGKKLIVTDGVFSMDGDVAPLPEIVELAERYGAVTYVDD 200 (385)
T ss_pred HHHhcCC---ceEEeC-------CCCHHHHHHHHHhhcc--CCCeEEEEecCCcCCCCccCHHHHHHHHHHhCCEEEEEC
Confidence 8888887 666553 5789999998876421 234567777778999999999999999999999999999
Q ss_pred ccccccccCccc-hhhhcCC-CCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCC-ccccCCccccCCCccCCCCc
Q 048643 287 AYAGSACICPEF-QHFIDGV-EGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTN-PEYLKNKATESKQVVDYKDW 363 (506)
Q Consensus 287 A~gg~~~~~~~~-~~~~~gi-~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~-~~yl~~~~~~~~~~~~~~~~ 363 (506)
+|+.+.+..... .....++ ...|.+..+++|+++.+. |+++. +++.. +.+... ..|....
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g--G~~~~-~~~~~-~~~~~~~~~~~~~~------------- 263 (385)
T TIGR01825 201 AHGSGVMGEAGRGTVHHFGLEDKVDIQVGTLSKAIGVVG--GYAAG-HKELI-EYLKNRARPFLFST------------- 263 (385)
T ss_pred cccccCcCCCCCccHhhcCCCcCCcEEEEeccHHhhcCC--CEEec-CHHHH-HHHHHhCccccccC-------------
Confidence 996553321110 0000111 256778889999997542 55544 33332 233211 1121100
Q ss_pred cccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c--ceEEEeecCCCcccccccccchHH
Q 048643 364 QITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS---P--SAVMDKLKPKYENCHSQQLVTEEE 438 (506)
Q Consensus 364 ~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p--~~v~f~~~~~~~~~~~~~~~~~~~ 438 (506)
.........+..+++.+.. ..+..++..++++++.+.|++. +++ | +++.+...+.
T Consensus 264 ---~~~~~~~~a~~~al~~~~~--~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~-------------- 323 (385)
T TIGR01825 264 ---AQPPAVVAALAAAVDELQR--SPELMERLWDNTRFFKAGLGKL-GYDTGGSETPITPVVIGDE-------------- 323 (385)
T ss_pred ---CCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHc-CCCCCCCCCCEEEEEECCH--------------
Confidence 0000111233334443321 1346677778899999999886 676 3 5555554221
Q ss_pred HHHHHHHHHHHHHHhcCcEEEeeee----ECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 048643 439 AINEFNRELLESINASGKAYMTHAV----CGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAF 498 (506)
Q Consensus 439 ~~~~~~~~l~~~l~~~g~~~~~~~~----~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l 498 (506)
.....+.+.|.++|+. +.+.. ..+..++|+++ +...++++|+++++.|+++.+++
T Consensus 324 ---~~~~~~~~~L~~~gi~-v~~~~~~~~~~~~~~iRi~~-~~~~~~e~i~~~~~~l~~~~~~~ 382 (385)
T TIGR01825 324 ---KAAQEFSRRLFDEGIF-AQSIVFPTVPRGTARIRNIP-TAEHTKDDLDQALDAYEKVGKEL 382 (385)
T ss_pred ---HHHHHHHHHHHHCCcE-EcccCCCCCCCCCceEEEEE-cCCCCHHHHHHHHHHHHHHHHHh
Confidence 1235677777777764 33221 12446899987 45678889999999999887653
No 113
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.80 E-value=8.3e-17 Score=166.45 Aligned_cols=322 Identities=11% Similarity=0.031 Sum_probs=205.0
Q ss_pred HHHHHHHHHhhcCCC-CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhh
Q 048643 106 AGFLGEMLSSGFNVV-GFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKI 184 (506)
Q Consensus 106 ~~~~~~~l~~~~n~~-~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~ 184 (506)
+..+.+.+...++.. ...|. .++...+.+.+.+|+.+..|++.+. ....++|+|+++++..++.+..+
T Consensus 47 ~~~~~~~~~~~~~~~~~~~y~-~~G~~~lr~aia~~~~~~~g~~~~~----~~~I~it~G~~~al~~~~~~~~~------ 115 (399)
T PRK07681 47 ADFVREEMVHTANQKESYGYT-LSGIQEFHEAVTEYYNNTHNVILNA----DKEVLLLMGSQDGLVHLPMVYAN------ 115 (399)
T ss_pred CHHHHHHHHHHHhccccCCCC-CCCcHHHHHHHHHHHHHHhCCCCCC----CCeEEECCCcHHHHHHHHHHhCC------
Confidence 334555555555432 22332 3567889999999999888865331 02688899998887665554332
Q ss_pred cccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCc
Q 048643 185 GRENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITA 264 (506)
Q Consensus 185 ~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~ 264 (506)
++..|+++..+|..+...++.+|+ +++.+|+++++++.+|+++|++++.+. +.+|+++.++|+||.
T Consensus 116 -----~Gd~Vlv~~P~y~~~~~~~~~~G~---~~~~v~~~~~~~~~~d~~~l~~~~~~~------~k~v~l~~P~NPTG~ 181 (399)
T PRK07681 116 -----PGDIILVPDPGYTAYETGIQMAGA---TSYYMPLKKENDFLPDLELIPEEIADK------AKMMILNFPGNPVPA 181 (399)
T ss_pred -----CCCEEEECCCCccchHHHHHhcCC---EEEEEecCCCCCCcCCHHHHHHhcccc------ceEEEEeCCCCCcCc
Confidence 567788899999999999999999 999999986556789999999888643 337888889999999
Q ss_pred ccC---hhHHHHHHHHhCCEEEeecccccccccCccchhhh--cCCCCCCeeEEcCccccC-CCCcceEEEEeCchhHHh
Q 048643 265 VDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFI--DGVEGADSFSLNAHKWFF-TTLDCCCLWVKDPSALVS 338 (506)
Q Consensus 265 idp---l~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~--~gi~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~ 338 (506)
+-+ +++|+++|++||+|+++|.+|+.+..-........ .+...-..+..++.|.++ ....+|+++. ++... +
T Consensus 182 ~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~~i~-~~~l~-~ 259 (399)
T PRK07681 182 MAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLSKSYSLAGSRIGYMIG-NEEIV-R 259 (399)
T ss_pred CCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCCCcccEEEEeecccccCCccceeEEEec-CHHHH-H
Confidence 966 78899999999999999999976543211111111 111111234557899997 4466888875 33332 3
Q ss_pred hhcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHh--chhHHHHHHHHHHHHHHHHHHHHHcCCCCc---
Q 048643 339 SLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNY--GVANLRHFLRSHVNMAKLFERLVASDKRVS--- 413 (506)
Q Consensus 339 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~--- 413 (506)
.+.....+.. + .. ..+..+++...+ +.+.+++..+...++.+++.+.|++. +++
T Consensus 260 ~~~~~~~~~~--------------~--~~----s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~ 318 (399)
T PRK07681 260 ALTQFKSNTD--------------Y--GV----FLPIQKAACAALRNGAAFCEKNRGIYQERRDTLVDGFRTF-GWNVDK 318 (399)
T ss_pred HHHHHHhhcc--------------c--CC----CHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CCcccC
Confidence 3321111110 0 00 112222333333 33456666677778888899999887 666
Q ss_pred c---ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHh-cCcEEEeeeeE--CCEEEEEEEecCCCCCHHHHHHH
Q 048643 414 P---SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINA-SGKAYMTHAVC--GGIYAMRFAVGATLTEERHVMVA 487 (506)
Q Consensus 414 p---~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~--~g~~~lR~~~~~~~tt~edi~~l 487 (506)
| ..+.+++.+. ....++.+.+.+ .|+....+..+ .+..++|++++. ++++++++
T Consensus 319 p~~g~f~~~~l~~~-----------------~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~---~~~~~~~~ 378 (399)
T PRK07681 319 PAGSMFVWAEIPKG-----------------WTSLSFAYALMDRANVVVTPGHAFGPHGEGFVRIALVQ---DEEVLQQA 378 (399)
T ss_pred CCeeeEEEEECCCC-----------------CCHHHHHHHHHHhCCEEEeCChhhCcCCCCeEEEEecC---CHHHHHHH
Confidence 4 3333344321 012356666655 57644433322 234689999963 57799999
Q ss_pred HHHHHHHH
Q 048643 488 WTMVQEQL 495 (506)
Q Consensus 488 i~~l~~~~ 495 (506)
++.|++.+
T Consensus 379 l~~l~~~~ 386 (399)
T PRK07681 379 VENIRNSG 386 (399)
T ss_pred HHHHHHhc
Confidence 99998743
No 114
>PLN00175 aminotransferase family protein; Provisional
Probab=99.80 E-value=4.8e-17 Score=168.63 Aligned_cols=323 Identities=12% Similarity=0.082 Sum_probs=211.0
Q ss_pred HHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcc
Q 048643 107 GFLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGR 186 (506)
Q Consensus 107 ~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~ 186 (506)
..+.+.+...+......|....+..++++.+.+|+.+.+|++.+. ....++|+|+++++..++.+..+
T Consensus 70 ~~~~~~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~----~~~I~vt~G~~~al~~~~~~l~~-------- 137 (413)
T PLN00175 70 DFVKEAAIQAIRDGKNQYARGFGVPELNSAIAERFKKDTGLVVDP----EKEVTVTSGCTEAIAATILGLIN-------- 137 (413)
T ss_pred HHHHHHHHHHHhcCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCC----CCCEEEeCCHHHHHHHHHHHhCC--------
Confidence 345555555554433456666678899999999999988875331 01578899999887666654332
Q ss_pred cCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCccc
Q 048643 187 ENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVD 266 (506)
Q Consensus 187 ~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~id 266 (506)
++..|++++..|..+...++..|. +++.||++++ ++.+|++.|++++.+.+ .+|+++.++|+||.+-
T Consensus 138 ---~gd~Vlv~~P~y~~~~~~~~~~g~---~~~~v~~~~~-~~~~~~~~l~~~~~~~~------k~i~i~~p~NPtG~~~ 204 (413)
T PLN00175 138 ---PGDEVILFAPFYDSYEATLSMAGA---KIKTVTLRPP-DFAVPEDELKAAFTSKT------RAILINTPHNPTGKMF 204 (413)
T ss_pred ---CCCEEEEeCCCchhHHHHHHHcCC---EEEEEECCcc-cCCCCHHHHHHhcCcCc------eEEEecCCCCCCCcCC
Confidence 567788888999999999999999 9999999754 47999999999986533 3678889999999995
Q ss_pred ---ChhHHHHHHHHhCCEEEeecccccccccCccchhh--hcCCCCCCeeEEcCccccCC-CCcceEEEEeCchhHHhhh
Q 048643 267 ---PLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHF--IDGVEGADSFSLNAHKWFFT-TLDCCCLWVKDPSALVSSL 340 (506)
Q Consensus 267 ---pl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~--~~gi~~aDsi~~~~hK~l~~-p~~~g~~~~r~~~~l~~~~ 340 (506)
++++|+++|++|++|+++|.+|.....- +..... +.+...-..+..++.|.++. ...+|+++... ... ..+
T Consensus 205 s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~-~~~~s~~~~~~~~~~vi~i~SfSK~~~~~G~RiG~~v~~~-~l~-~~l 281 (413)
T PLN00175 205 TREELELIASLCKENDVLAFTDEVYDKLAFE-GDHISMASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPP-HLT-WGV 281 (413)
T ss_pred CHHHHHHHHHHHHHcCcEEEEecccCccccC-CcccChhhCCCCcCcEEEEecchhhccCcchheeeeEeCH-HHH-HHH
Confidence 5788999999999999999999765431 111111 11111222455678999984 46788877643 222 222
Q ss_pred cCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHh--chhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c-
Q 048643 341 STNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNY--GVANLRHFLRSHVNMAKLFERLVASDKRVS---P- 414 (506)
Q Consensus 341 ~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p- 414 (506)
.....+.. . + ...+.-+++.+.+ +...+++..++..+.++++.+.|++. +++ |
T Consensus 282 ~~~~~~~~----------------~-~---~s~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~p~ 340 (413)
T PLN00175 282 RQAHSFLT----------------F-A---TATPMQWAAVAALRAPESYYEELKRDYSAKKDILVEGLKEV-GFKVYPSS 340 (413)
T ss_pred HHHHhhcc----------------C-C---CCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC-CCeecCCC
Confidence 11111110 0 0 0112223333333 34457777888888999999999887 666 4
Q ss_pred -ce-EEEeecCCCcccccccccchHHHHHHHHHHHHHHHH-hcCcEEEeeeeE-----CCEEEEEEEecCCCCCHHHHHH
Q 048643 415 -SA-VMDKLKPKYENCHSQQLVTEEEAINEFNRELLESIN-ASGKAYMTHAVC-----GGIYAMRFAVGATLTEERHVMV 486 (506)
Q Consensus 415 -~~-v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~-----~g~~~lR~~~~~~~tt~edi~~ 486 (506)
+. +.+++.+.+. ....++.+.+. +.|+.++.+..+ .+..++|++++. +++++++
T Consensus 341 g~~f~~~~~~~~~~---------------~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRls~~~---~~e~l~~ 402 (413)
T PLN00175 341 GTYFVMVDHTPFGF---------------ENDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFAFCK---DEETLRA 402 (413)
T ss_pred eeEEEEEeccccCC---------------CCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEEEEEEcC---CHHHHHH
Confidence 33 3334322110 01245666665 457765544433 135689999963 5789999
Q ss_pred HHHHHHHHHH
Q 048643 487 AWTMVQEQLE 496 (506)
Q Consensus 487 li~~l~~~~~ 496 (506)
.++.|.+..+
T Consensus 403 ~~~rL~~~~~ 412 (413)
T PLN00175 403 AVERMKTKLK 412 (413)
T ss_pred HHHHHHHHHh
Confidence 9988887654
No 115
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.79 E-value=1.7e-16 Score=164.50 Aligned_cols=292 Identities=11% Similarity=0.098 Sum_probs=186.6
Q ss_pred HHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhC
Q 048643 133 LENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVG 212 (506)
Q Consensus 133 lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G 212 (506)
...++.+.+++++|.+ ..+++++|++||..++.+.... .++.+|+++...|.++..+++..|
T Consensus 91 ~~~~le~~la~~~g~~---------~~~~~~SG~~An~~ai~~l~~~---------~~g~~I~~~~~~H~s~~~~~~~~g 152 (406)
T PRK13393 91 YHVLLEAELADLHGKE---------AALLFTSGYVSNWAALSTLGSR---------LPGCVILSDELNHASMIEGIRHSR 152 (406)
T ss_pred HHHHHHHHHHHHhCCC---------cEEEeCCcHHHHHHHHHHhhcC---------CCCCEEEEccchhHHHHHHHHHcC
Confidence 4445557788888864 3466777788999888743211 034578888889999999998887
Q ss_pred CCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeeccccccc
Q 048643 213 IDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSA 292 (506)
Q Consensus 213 ~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~ 292 (506)
. +++.++. .|++.|++.++... ...+.+|++....+++|.+.|+++|.++|++||++++||++|+.++
T Consensus 153 ~---~~~~~~~-------~d~~~l~~~l~~~~--~~~~~~v~~~~v~~~~G~~~~l~~i~~l~~~~~~~livDea~~~g~ 220 (406)
T PRK13393 153 A---EKRIFRH-------NDPADLERKLSDLD--PHRPKLVAFESVYSMDGDIAPIAEICDVAEKHGAMTYLDEVHAVGL 220 (406)
T ss_pred C---eEEEeCC-------CCHHHHHHHHHhcc--CCCCEEEEEcCCCCCCCchhCHHHHHHHHHHcCCEEEEECCccccc
Confidence 7 7777763 37888888776431 1235578888899999999999999999999999999999997443
Q ss_pred ccCccchhh--hcCC-CCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhc-CCccccCCccccCCCccCCCCccccCC
Q 048643 293 CICPEFQHF--IDGV-EGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLS-TNPEYLKNKATESKQVVDYKDWQITLS 368 (506)
Q Consensus 293 ~~~~~~~~~--~~gi-~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~-~~~~yl~~~~~~~~~~~~~~~~~~~~s 368 (506)
+ .+..... ..++ +..|.+..++-|.++.+. |+++. ++... ..+. ...+|.. ..+
T Consensus 221 ~-g~~G~g~~~~~~~~~~~~i~~~tlsKa~g~~G--G~~~~-~~~~~-~~l~~~~~~~~~-----------------t~~ 278 (406)
T PRK13393 221 Y-GPRGGGIAEREGLADRLTIIEGTLAKAFGVMG--GYITG-SAALC-DFIRSFASGFIF-----------------TTS 278 (406)
T ss_pred c-CCCCCchhhhcCCCCCCeEEEEeCchhhcccC--ceeeC-CHHHH-HHHHHhCcCcee-----------------cCc
Confidence 2 1111111 1122 245777678899998642 55543 33322 2221 1111211 111
Q ss_pred CC-CCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c--ceEEEeecCCCcccccccccchHHHHHH
Q 048643 369 RR-FRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS---P--SAVMDKLKPKYENCHSQQLVTEEEAINE 442 (506)
Q Consensus 369 r~-~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p--~~v~f~~~~~~~~~~~~~~~~~~~~~~~ 442 (506)
.. .....+..+++.+-..+ ...++..+++++|.+.|++. +++ + +++.+.+.. ..
T Consensus 279 ~~p~~~aa~~aaL~~~~~~~--~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~i~~v~~~~-----------------~~ 338 (406)
T PRK13393 279 LPPAVAAGALASVRHLKASS--AERERHQDRVARLRARLDKA-GIPHLPNPSHIVPVMVGD-----------------PV 338 (406)
T ss_pred cCHHHHHHHHHHHHHHhhCH--HHHHHHHHHHHHHHHHHHHc-CCCcCCCCCCeEEEEeCC-----------------HH
Confidence 11 11234445555543332 22356678899999999876 565 2 666665422 12
Q ss_pred HHHHHHHHHHhc-CcEEEee----eeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 048643 443 FNRELLESINAS-GKAYMTH----AVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAF 498 (506)
Q Consensus 443 ~~~~l~~~l~~~-g~~~~~~----~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l 498 (506)
...++.++|.++ |+ ++.+ +...|..++|+++ +...+++||++++++|+++.+++
T Consensus 339 ~~~~l~~~L~~~~Gi-~v~~~~~p~~p~g~~~iRis~-~~~~t~edid~l~~~l~~~~~~~ 397 (406)
T PRK13393 339 LCKQISDELLDRYGI-YVQPINYPTVPRGTERLRITP-SPLHTDADIEHLVQALSEIWARL 397 (406)
T ss_pred HHHHHHHHHHHhCCE-EEEeECCCCCCCCCceEEEEE-CCCCCHHHHHHHHHHHHHHHHhc
Confidence 245677777764 75 4443 2334557899999 46677889999999999987664
No 116
>PRK08363 alanine aminotransferase; Validated
Probab=99.79 E-value=3e-17 Score=169.67 Aligned_cols=327 Identities=11% Similarity=0.068 Sum_probs=205.0
Q ss_pred HHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhccc
Q 048643 108 FLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRE 187 (506)
Q Consensus 108 ~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~ 187 (506)
.+.+.+...+......|...++..++++.+.+|+.+.+|...+. ...++|+|+++++..++.+..+
T Consensus 50 ~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~-----~~i~it~G~~~al~~~~~~~~~--------- 115 (398)
T PRK08363 50 HMKEAYCRAIKEGHNYYGPSEGLPELREAIVKREKRKNGVDITP-----DDVRVTAAVTEALQLIFGALLD--------- 115 (398)
T ss_pred HHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHhcCCCCCh-----hhEEEeCCHHHHHHHHHHHhCC---------
Confidence 33444444432222345556677899999999998887754331 2788999999888777665432
Q ss_pred CCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEE-ecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCccc
Q 048643 188 NISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAI-KTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVD 266 (506)
Q Consensus 188 ~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v-~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~id 266 (506)
++..|+++..+|..+...++.+|. .++.+ +.++ +++.+|++.|++++.+. +.+|+++.++|+||.+-
T Consensus 116 --~gd~Vl~~~p~y~~~~~~~~~~g~---~~v~~~~~~~-~~~~~d~~~l~~~~~~~------~~~v~l~~p~NPtG~~~ 183 (398)
T PRK08363 116 --PGDEILIPGPSYPPYTGLVKFYGG---VPVEYRTIEE-EGWQPDIDDIRKKITEK------TKAIAVINPNNPTGALY 183 (398)
T ss_pred --CCCEEEEcCCCCcchHHHHHHcCC---EEEEeccccc-cCCcCCHHHHHhhCCcc------eEEEEEECCCCCCCcCc
Confidence 567788899999999999999998 78877 4543 34689999999888653 33677889999999986
Q ss_pred C---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCC-Cee-EEcCcccc-CCCCcceEEEEeCchhHHhhh
Q 048643 267 P---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGA-DSF-SLNAHKWF-FTTLDCCCLWVKDPSALVSSL 340 (506)
Q Consensus 267 p---l~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~a-Dsi-~~~~hK~l-~~p~~~g~~~~r~~~~l~~~~ 340 (506)
+ +++|+++|+++|+++++|++|+.... ...... +..+... ..+ ..++.|++ .....+|++++.++..+...+
T Consensus 184 ~~~~~~~l~~~a~~~~~~li~Deay~~~~~-~~~~~~-~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~~~~~~l 261 (398)
T PRK08363 184 EKKTLKEILDIAGEHDLPVISDEIYDLMTY-EGKHVS-PGSLTKDVPVIVMNGLSKVYFATGWRLGYIYFVDPEGKLAEV 261 (398)
T ss_pred CHHHHHHHHHHHHHcCeEEEEhhhhhhhcc-CCcccC-HHHcCcCCcEEEEecchhccCCccceEEEEEEeCcHHHHHHH
Confidence 6 89999999999999999999976432 111111 1111122 233 45789995 456789998884332211111
Q ss_pred cCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHh--chhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c-
Q 048643 341 STNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNY--GVANLRHFLRSHVNMAKLFERLVASDKRVS---P- 414 (506)
Q Consensus 341 ~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p- 414 (506)
......+... .... ..+...++...+ ..+.+++..++..+..+++.+.|+++++++ |
T Consensus 262 ~~~~~~~~~~-------------~~~~----s~~~q~~~~~~l~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~ 324 (398)
T PRK08363 262 REAIDKLARI-------------RLCP----NTPAQFAAIAGLTGPMDYLEEYMKKLKERRDYIYKRLNEIPGISTTKPQ 324 (398)
T ss_pred HHHHHHHhcc-------------cccC----ChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhcCCCCEecCCC
Confidence 1000000000 0000 111122222222 345677778888888999999998887766 4
Q ss_pred -ceEEE-eecCCCcccccccccchHHHHHHHHHHH-HHHHHhcCcEEEeeeeEC--CEEEEEEEecCCCCCHHHHHHHHH
Q 048643 415 -SAVMD-KLKPKYENCHSQQLVTEEEAINEFNREL-LESINASGKAYMTHAVCG--GIYAMRFAVGATLTEERHVMVAWT 489 (506)
Q Consensus 415 -~~v~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~l~~~g~~~~~~~~~~--g~~~lR~~~~~~~tt~edi~~li~ 489 (506)
+.+.| ++.+.. .....++ .+.+.+.|+....+..+. +..++|+++.. +++++++.++
T Consensus 325 g~~~~~~~l~~~~---------------~~~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~~---~~~~l~~~l~ 386 (398)
T PRK08363 325 GAFYIFPRIEEGP---------------WKDDKEFVLDVLHEAHVLFVHGSGFGEYGAGHFRLVFLP---PVEILEEAMD 386 (398)
T ss_pred eEEEEEEEeccCC---------------CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecC---CHHHHHHHHH
Confidence 55555 443210 0001223 344566777544443332 35699999953 5778999999
Q ss_pred HHHHHHHH
Q 048643 490 MVQEQLEA 497 (506)
Q Consensus 490 ~l~~~~~~ 497 (506)
.|.++.++
T Consensus 387 ~l~~~~~~ 394 (398)
T PRK08363 387 RFEEFMRE 394 (398)
T ss_pred HHHHHHHH
Confidence 88887654
No 117
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.79 E-value=2.6e-16 Score=162.95 Aligned_cols=319 Identities=13% Similarity=0.095 Sum_probs=196.4
Q ss_pred ccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCch
Q 048643 123 NWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHC 202 (506)
Q Consensus 123 ~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~ 202 (506)
.|........+++.+.+++....|.+.. ....++|+|+++++..++.+... ++..|+++..++.
T Consensus 68 ~Y~~~~g~~~lr~~ia~~l~~~~~~~~~-----~~~ii~t~G~t~al~~~~~~l~~-----------~gd~Vlv~~p~y~ 131 (403)
T TIGR01265 68 GYAPSVGALAAREAVAEYLSSDLPGKLT-----ADDVVLTSGCSQAIEICIEALAN-----------PGANILVPRPGFP 131 (403)
T ss_pred CCCCCCCCHHHHHHHHHHHHhhcCCCCC-----HHHEEEecChHHHHHHHHHHhCC-----------CCCEEEEeCCCch
Confidence 4444455667777777777765554322 12688999999998877776542 5567888889998
Q ss_pred HHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCccc---ChhHHHHHHHHhC
Q 048643 203 ALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVD---PLKPLCDVAKQFG 279 (506)
Q Consensus 203 s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~id---pl~~I~~ia~~~g 279 (506)
.+...+...|+ +++.++++.++++.+|++.+++++.+.+ .+|+++.++|++|.+- ++++|+++|+++|
T Consensus 132 ~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~~~~~~------~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~ 202 (403)
T TIGR01265 132 LYDTRAAFSGL---EVRLYDLLPEKDWEIDLDGLEALADEKT------VAIVVINPSNPCGSVFSRDHLQKIAEVARKLG 202 (403)
T ss_pred hHHHHHHHcCC---EEEEecCCcccCCccCHHHHHHHhCcCc------cEEEEecCCCCCCCCCCHHHHHHHHHHHHHCC
Confidence 88889999999 9999988654567899999999886543 3688888999999995 5899999999999
Q ss_pred CEEEeecccccccccCccchhhhcCCC-CCC-eeEEcCccccCCC-CcceEEEEeCch-hHHhhh-cCCccccCCccccC
Q 048643 280 IWVHVDAAYAGSACICPEFQHFIDGVE-GAD-SFSLNAHKWFFTT-LDCCCLWVKDPS-ALVSSL-STNPEYLKNKATES 354 (506)
Q Consensus 280 ~~lhVDaA~gg~~~~~~~~~~~~~gi~-~aD-si~~~~hK~l~~p-~~~g~~~~r~~~-~l~~~~-~~~~~yl~~~~~~~ 354 (506)
+|+++|++|+.+..-.+.+.. +..+. ... .+..++.|.++.| ..+|++++.++. .+...+ .....+...
T Consensus 203 ~~ii~De~y~~~~~~~~~~~~-~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~~~~~~~~~~~~~~----- 276 (403)
T TIGR01265 203 IPIIADEIYGHMVFGDAPFIP-MASFASIVPVLSLGGISKRWVVPGWRLGWIIIHDPHGIFRDTVLQGLKNLLQR----- 276 (403)
T ss_pred CEEEEEccccccccCCCCccc-hhhhccCCcEEEEeecccccCCCcceEEEEEEeCchhhhHHHHHHHHHHHhhh-----
Confidence 999999999765432111111 11111 112 2345689986555 779998876431 111101 000001000
Q ss_pred CCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c---ceEEEeecCCCccc
Q 048643 355 KQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS---P---SAVMDKLKPKYENC 428 (506)
Q Consensus 355 ~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p---~~v~f~~~~~~~~~ 428 (506)
....+ .+....+-..+.......+++..++..+..+++.+.|+..++++ | ..+.+++.....
T Consensus 277 ---------~~~~~-~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~g~f~~~~~~~~~~-- 344 (403)
T TIGR01265 277 ---------ILGPA-TIVQGALPDILENTPQEFFDGKISVLKSNAELCYEELKDIPGLVCPKPEGAMYLMVKLELELF-- 344 (403)
T ss_pred ---------hcCCC-hHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCceeEEEEecccccc--
Confidence 00000 01111111223222234566777788888899999998877766 5 344444432100
Q ss_pred ccccccchHHHHHHHHHHHHHHH-HhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 048643 429 HSQQLVTEEEAINEFNRELLESI-NASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEA 497 (506)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~l~~~l-~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~ 497 (506)
.+ .....++.+.+ .+.|+.+..+..+....++|+++.. .++.+++.++.|.++.++
T Consensus 345 ------~~----~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~iRis~~~---~~~~l~~~l~~l~~~~~~ 401 (403)
T TIGR01265 345 ------PE----IKDDVDFCEKLVREESVICLPGSAFGLPNWVRITITV---PESMLEEACSRIKEFCER 401 (403)
T ss_pred ------CC----CCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEecC---CHHHHHHHHHHHHHHHHh
Confidence 00 00123455554 3557654444444446799999964 466788888777776643
No 118
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.79 E-value=3.2e-17 Score=167.34 Aligned_cols=219 Identities=16% Similarity=0.186 Sum_probs=157.6
Q ss_pred ccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHH
Q 048643 125 ISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCAL 204 (506)
Q Consensus 125 ~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~ 204 (506)
...|....+|+. ++++.|.+ ..++++||++|+..++.+... ++..|+++...|.+.
T Consensus 50 ~~npt~~~Le~~----lA~leg~e---------~ivvt~gg~~Ai~~~l~all~-----------~Gd~Il~~~~~y~~~ 105 (388)
T PRK08861 50 SGNPNRGLLEQT----LSELESGK---------GAVVTNCGTSALNLWVSALLG-----------PDDLIVAPHDCYGGT 105 (388)
T ss_pred CCCchHHHHHHH----HHHHhCCC---------eEEEECCHHHHHHHHHHHHcC-----------CCCEEEEcCCchHHH
Confidence 355666777755 67777742 679999999998877765432 566788888888765
Q ss_pred HHHHH----HhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCC
Q 048643 205 QKAAQ----IVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGI 280 (506)
Q Consensus 205 ~ka~~----~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~ 280 (506)
.+.+. ..|+ +++.++ ..|++++++++++++ .+|+++.++|++|.+-|+++|+++|+++|+
T Consensus 106 ~~~~~~~~~~~gi---~v~~vd-------~~d~e~l~~~i~~~t------klV~lesP~NPtG~v~dl~~I~~la~~~gi 169 (388)
T PRK08861 106 YRLFNTRANKGDF---KVQFVD-------QSDAAALDAALAKKP------KLILLETPSNPLVRVVDIAELCQKAKAVGA 169 (388)
T ss_pred HHHHHHHHhcCCe---EEEEEC-------CCCHHHHHHhcCcCC------eEEEEECCCCCCCcccCHHHHHHHHHHcCC
Confidence 54332 2345 566664 248899998886543 489999999999999999999999999999
Q ss_pred EEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCc--ceEEEEeCchhHHhhhcCCccccCCccccCCCcc
Q 048643 281 WVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLD--CCCLWVKDPSALVSSLSTNPEYLKNKATESKQVV 358 (506)
Q Consensus 281 ~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~ 358 (506)
+++||.+|+.+....| .. -+||.++.+.|||++.|.+ .|+++.++++... .+. ++..
T Consensus 170 ~vIvDea~~~~~~~~p-l~------~GaDivv~S~tK~l~G~~d~~gG~i~~~~~~~~~-~~~----~~~~--------- 228 (388)
T PRK08861 170 LVAVDNTFLTPVLQKP-LE------LGADFVIHSTTKYINGHSDVIGGVLITKTKEHAE-ELA----WWGN--------- 228 (388)
T ss_pred EEEEECCccccccCCC-cc------cCCCEEEeecceeccCCCcceeEEEEecHHHHHH-HHH----HHHh---------
Confidence 9999999987654322 11 1799999999999998865 6666666554322 111 0100
Q ss_pred CCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc
Q 048643 359 DYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS 413 (506)
Q Consensus 359 ~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~ 413 (506)
..+....+...|..++ |.+-+.-+++++.++|..+++.|+++|.++
T Consensus 229 -------~~G~~~~p~~a~l~~r--gl~Tl~lR~~~~~~~a~~~a~~L~~~p~v~ 274 (388)
T PRK08861 229 -------CIGATGTPFDSYMTLR--GIRTLGARMRVHEESAQQILAYLQTQSLVG 274 (388)
T ss_pred -------ccCCCCChHHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHhCCCee
Confidence 1122234566787766 667888999999999999999999988765
No 119
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.79 E-value=1.4e-16 Score=165.19 Aligned_cols=340 Identities=10% Similarity=0.030 Sum_probs=210.5
Q ss_pred HHHHHHHHHHhhcCCC-CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHh
Q 048643 105 IAGFLGEMLSSGFNVV-GFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNK 183 (506)
Q Consensus 105 ~~~~~~~~l~~~~n~~-~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~ 183 (506)
++..+.+.+...++.. ...|....+..++.+.+.+|+.+.+|++.+. ...++|+|+++++..++.+..+
T Consensus 50 ~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~-----~~I~it~G~~~al~~~~~~l~~----- 119 (409)
T PLN00143 50 TTNIAEDAIVEAVRSAKFNSYAPTGGILPARRAIADYLSNDLPYQLSP-----DDVYLTLGCKHAAEIIIKVLAR----- 119 (409)
T ss_pred CCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCH-----hhEEEecChHHHHHHHHHHHcC-----
Confidence 3444455555555433 2346556677889999999999887765432 3788999999888777665433
Q ss_pred hcccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCC
Q 048643 184 IGRENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAIT 263 (506)
Q Consensus 184 ~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG 263 (506)
++..|+++..++..+...++..|. +++.+++++++++.+|+++|++++++. +..++++.++|+||
T Consensus 120 ------~gd~v~v~~P~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~~~~~------~~~~~~~nP~NPTG 184 (409)
T PLN00143 120 ------PEANILLPRPGFPDVETYAIFHHL---EIRHFDLLPEKGWEVDLDAVEAIADEN------TIAMVIINPGNPCG 184 (409)
T ss_pred ------CCCEEEEcCCCCcCHHHHHHHcCC---EEEEEeccCCCCCcCCHHHHHHhcccC------CEEEEEECCCCCCC
Confidence 566788888999999999999999 999999864445789999999887543 23677778999999
Q ss_pred cccC---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCC-C-eeEEcCccccC-CCCcceEEEEeCchhHH
Q 048643 264 AVDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGA-D-SFSLNAHKWFF-TTLDCCCLWVKDPSALV 337 (506)
Q Consensus 264 ~idp---l~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~a-D-si~~~~hK~l~-~p~~~g~~~~r~~~~l~ 337 (506)
.+-+ +++|+++|++|++|+++|.+|.....-...... +..+... . .+..++.|.++ ....+|+++..++..+.
T Consensus 185 ~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~-~~~~~~~~~vi~~~SfSK~f~~pGlRvG~~v~~~p~~~~ 263 (409)
T PLN00143 185 SVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVP-MGLFASIVPVITLGSISKRWMIPGWGLGWLVTCDPSGLL 263 (409)
T ss_pred CccCHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcc-hhhhcccCcEEEEccchhhcCCCccceEEEEeeCchhhh
Confidence 9966 788889999999999999999765431111110 1111111 1 34566899955 45779999885543221
Q ss_pred hhhcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHh---chhHHHHHHHHHHHHHHHHHHHHHcCCCCc-
Q 048643 338 SSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNY---GVANLRHFLRSHVNMAKLFERLVASDKRVS- 413 (506)
Q Consensus 338 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~---G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~- 413 (506)
+..... ..+.... .. . .++ ..+...++...+ +.+.+++.+++..+..+++.+.|.+++++.
T Consensus 264 ~~~~~~-~~~~~~~-------~~---~-~~~---~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~ 328 (409)
T PLN00143 264 QICEIA-DSIKKAL-------NP---A-PFP---PTFIQAAIPEILEKTTEDFFSKTINILRAALAFCYDKLKEIPCIMC 328 (409)
T ss_pred hhHHHH-HHHHHHH-------hc---c-CCC---CchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 110000 0000000 00 0 000 111222222222 245677888888888888889998875432
Q ss_pred ---c---ceEEEeecCCCcccccccccchHHHHHHHHHHHH-HHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHH
Q 048643 414 ---P---SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELL-ESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMV 486 (506)
Q Consensus 414 ---p---~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~ 486 (506)
| ..+.+++..... ... ....++. +.+.+.|+.+..+..+....++|++++. +++++++
T Consensus 329 ~~~p~gg~f~w~~l~~~~~-----------~~~-~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRi~~~~---~~~~l~~ 393 (409)
T PLN00143 329 PQKAEGAFFALVKLNLLLL-----------EDI-EDDMEFCLKLAKEESLIILPGVTVGLKNWLRITFAV---EQSSLED 393 (409)
T ss_pred CCCCCeeEEEEEecchhhc-----------CCC-CCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEEcC---CHHHHHH
Confidence 4 344444432000 000 0022333 3445667755554445556799999963 4778999
Q ss_pred HHHHHHHHHHHHHc
Q 048643 487 AWTMVQEQLEAFLT 500 (506)
Q Consensus 487 li~~l~~~~~~l~~ 500 (506)
.++.|.++.++..+
T Consensus 394 al~rl~~~l~~~~~ 407 (409)
T PLN00143 394 GLGRLKSFCGRHAK 407 (409)
T ss_pred HHHHHHHHHHHhcc
Confidence 99888887765433
No 120
>PRK07550 hypothetical protein; Provisional
Probab=99.79 E-value=1.2e-16 Score=164.61 Aligned_cols=324 Identities=10% Similarity=0.011 Sum_probs=203.1
Q ss_pred HHHHHHHHhhc-CCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhc
Q 048643 107 GFLGEMLSSGF-NVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIG 185 (506)
Q Consensus 107 ~~~~~~l~~~~-n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~ 185 (506)
..+.+.+...+ +.....|...++..++++.+.+++.+..|..... ...++|+|+++++..++.+...
T Consensus 45 ~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~-----~~i~~t~G~~~al~~~~~~l~~------- 112 (386)
T PRK07550 45 PELLRALAEAAADPAAHLYGPVEGLPELREAYAAHYSRLYGAAISP-----EQVHITSGCNQAFWAAMVTLAG------- 112 (386)
T ss_pred HHHHHHHHHHHhCcCCcCCCCCCCCHHHHHHHHHHHHHHhCCCCCc-----ceEEEecCcHHHHHHHHHHhcC-------
Confidence 33444444332 2223345555678999999999999988865331 3788899888887666555432
Q ss_pred ccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc
Q 048643 186 RENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV 265 (506)
Q Consensus 186 ~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i 265 (506)
++..|+++...+......++..|+ +++.|+.++++++.+|++.|++++++.+ .+|+++.++|+||.+
T Consensus 113 ----~gd~Vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~~~~~l~~~~~~~~------~~v~~~~P~NPtG~~ 179 (386)
T PRK07550 113 ----AGDEVILPLPWYFNHKMWLDMLGI---RPVYLPCDEGPGLLPDPAAAEALITPRT------RAIALVTPNNPTGVV 179 (386)
T ss_pred ----CCCEEEEcCCCCcchHHHHHhcCC---EEEEEecCCCcCCCCCHHHHHHHhcccC------cEEEEeCCCCCCCcc
Confidence 566788898888888888899999 9999999754457889999999997543 356777899999988
Q ss_pred cC---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCC-CC-CeeEEcCccccC-CCCcceEEEEeCchhHHhh
Q 048643 266 DP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVE-GA-DSFSLNAHKWFF-TTLDCCCLWVKDPSALVSS 339 (506)
Q Consensus 266 dp---l~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~-~a-Dsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~ 339 (506)
-+ +++|+++|++||+++++|.+|+.+..-.......+.... .. ..+..++.|.++ ....+|+++..+. .+ ..
T Consensus 180 ~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~i~~~~~-~~-~~ 257 (386)
T PRK07550 180 YPPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYALTGHRVGAVVASPA-RI-AE 257 (386)
T ss_pred cCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecchhhccCcccceEeeecCHH-HH-HH
Confidence 55 889999999999999999999764221100111111100 11 233667899997 4466888877532 22 22
Q ss_pred hcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhc--hhHHHHHHHHHHHHHHHHHHHHHcCCCCc--c-
Q 048643 340 LSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYG--VANLRHFLRSHVNMAKLFERLVASDKRVS--P- 414 (506)
Q Consensus 340 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G--~~g~~~~i~~~~~~a~~l~~~l~~~~~~~--p- 414 (506)
+.. +.... +... ..+..+++.+.+. .+..++..++..+.++++.+.|.+.+++. |
T Consensus 258 ~~~---~~~~~-------------~~~~----s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 317 (386)
T PRK07550 258 IEK---FMDTV-------------AICA----PRIGQIAVAWGLPNLADWRAGNRAEIARRRDAFRAVFARLPGWELLAS 317 (386)
T ss_pred HHH---HHhhc-------------ccCC----CcHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhCCCceeCCC
Confidence 211 11100 0001 1222233333332 24445566677778888999998876665 3
Q ss_pred --ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHH-hcCcEEEeeeeE--CCEEEEEEEecCCCCCHHHHHHHHH
Q 048643 415 --SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESIN-ASGKAYMTHAVC--GGIYAMRFAVGATLTEERHVMVAWT 489 (506)
Q Consensus 415 --~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~--~g~~~lR~~~~~~~tt~edi~~li~ 489 (506)
..+++++.... ....++.+++. +.|+....+..+ .+..++|+++.. .++++++++++
T Consensus 318 g~~~~~~~~~~~~----------------~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~--~~~~~~~~~~~ 379 (386)
T PRK07550 318 GAYFAYVRHPFPD----------------RPSREVARRLAKEAGILCLPGTMFGPGQEGYLRLAFAN--ADVAGIGELVE 379 (386)
T ss_pred ceEEEEecCCCCC----------------CCHHHHHHHHHHhcCEEEeCchhhCCCCCCEEEEEeec--CCHHHHHHHHH
Confidence 33444443211 01345666654 457644333322 235689999954 46789999999
Q ss_pred HHHHHH
Q 048643 490 MVQEQL 495 (506)
Q Consensus 490 ~l~~~~ 495 (506)
.|.+++
T Consensus 380 ~l~~~~ 385 (386)
T PRK07550 380 RLRAFA 385 (386)
T ss_pred HHHhhC
Confidence 988753
No 121
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.79 E-value=3.5e-17 Score=166.01 Aligned_cols=278 Identities=13% Similarity=0.062 Sum_probs=184.0
Q ss_pred HHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCCC
Q 048643 136 IVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGIDL 215 (506)
Q Consensus 136 ~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~ 215 (506)
++.+.+++++|.+.+ ..++++|+++++..++.+... ++..|+++...+..+...++..|+
T Consensus 58 ~lr~~ia~~~~~~~~-------~i~~~~G~~~~l~~~~~~l~~-----------~gd~v~~~~p~y~~~~~~~~~~g~-- 117 (346)
T TIGR01141 58 ELKQALADYYGVDPE-------QILLGNGSDEIIELLIRAFLE-----------PGDAVLVPPPTYSMYEISAKIHGA-- 117 (346)
T ss_pred HHHHHHHHHhCcChH-------HEEEcCCHHHHHHHHHHHhcC-----------CCCEEEEcCCCHHHHHHHHHHcCC--
Confidence 344667777776554 688999988887655544322 456788888888777778888999
Q ss_pred CCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHh--CCEEEeecccccccc
Q 048643 216 KNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQF--GIWVHVDAAYAGSAC 293 (506)
Q Consensus 216 ~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~--g~~lhVDaA~gg~~~ 293 (506)
+++.+|++. ++.+|++.|++++.+. +.+|+++.++|+||.+-|++++.++|+.+ |+++++|++|+....
T Consensus 118 -~~~~~~~~~--~~~~d~~~l~~~~~~~------~~~v~l~~p~NptG~~~~~~~~~~l~~~~~~~~~ii~D~~y~~~~~ 188 (346)
T TIGR01141 118 -EVVKVPLDE--DGQLDLEDILVAIDDK------PKLVFLCSPNNPTGNLLSRSDIEAVLERTPEDALVVVDEAYGEFSG 188 (346)
T ss_pred -eEEEeccCC--CCCCCHHHHHHhcCCC------CCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhhcC
Confidence 999999875 4689999999976443 33788889999999999999999999987 999999999974321
Q ss_pred cCccchhhhcCCCCCCeeEEcCccccCCC-CcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCccccCCCCCC
Q 048643 294 ICPEFQHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFR 372 (506)
Q Consensus 294 ~~~~~~~~~~gi~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~ 372 (506)
........... ..+.+..+++|+++.| ..+|+++++ +..+ +.+...... ++ ..
T Consensus 189 -~~~~~~~~~~~-~~~i~~~S~sK~~g~~G~r~G~~~~~-~~~~-~~~~~~~~~----------------~~------~~ 242 (346)
T TIGR01141 189 -EPSTLPLLAEY-PNLIVLRTLSKAFGLAGLRIGYAIAN-AEII-DALNKVRAP----------------FN------LS 242 (346)
T ss_pred -CccHHHHHhhC-CCEEEEehhhHhhhchhhhceeeecC-HHHH-HHHHhccCC----------------CC------CC
Confidence 11111112111 1234456789999654 458888774 3322 233211000 00 01
Q ss_pred chHHHHHHHHhch-hHHHHHHHHHHHHHHHHHHHHHcCCCCc--c---ceEEEeecCCCcccccccccchHHHHHHHHHH
Q 048643 373 SLKLWLVIRNYGV-ANLRHFLRSHVNMAKLFERLVASDKRVS--P---SAVMDKLKPKYENCHSQQLVTEEEAINEFNRE 446 (506)
Q Consensus 373 al~~~~~l~~~G~-~g~~~~i~~~~~~a~~l~~~l~~~~~~~--p---~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (506)
.+....+...+.. ..+.+..++..++++++.+.|+++++++ | ..++|.+... .++
T Consensus 243 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~g~~~~~~~~~~-------------------~~~ 303 (346)
T TIGR01141 243 RLAQAAAIAALRDDDFIEKTVEEINAERERLYDGLKKLPGLEVYPSDANFVLIRFPRD-------------------ADA 303 (346)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEECCCcCCEEEEecCCC-------------------HHH
Confidence 1222223333322 2477778888899999999999888877 4 5666655321 246
Q ss_pred HHHHHHhcCcEEEeeee-ECC-EEEEEEEecCCCCCHHHHHHHHHHHH
Q 048643 447 LLESINASGKAYMTHAV-CGG-IYAMRFAVGATLTEERHVMVAWTMVQ 492 (506)
Q Consensus 447 l~~~l~~~g~~~~~~~~-~~g-~~~lR~~~~~~~tt~edi~~li~~l~ 492 (506)
+.++|.+.|+. +.+.. +.+ ..++|+++. +++++++++++|+
T Consensus 304 ~~~~L~~~gI~-v~~g~~f~~~~~~iRls~~----~~~~i~~~~~~l~ 346 (346)
T TIGR01141 304 LFEALLEKGII-VRDLNSYPGLPNCLRITVG----TREENDRFLAALR 346 (346)
T ss_pred HHHHHHHCCeE-EEeCCCcCCCCCeEEEecC----CHHHHHHHHHHhC
Confidence 67777788864 44432 212 578999973 6779999998873
No 122
>PRK08912 hypothetical protein; Provisional
Probab=99.79 E-value=1.5e-16 Score=163.81 Aligned_cols=308 Identities=12% Similarity=0.023 Sum_probs=198.0
Q ss_pred cccccChhhHHHHHHHHHHHHHHcCCCCccccCCCC-cEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCC
Q 048643 122 FNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNG-GGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQT 200 (506)
Q Consensus 122 ~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~-~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~ 200 (506)
..|....+..++.+.+.+|+.+.+|.+.+. . ..++|+|+++++..++.+..+ ++..|+++..+
T Consensus 57 ~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~-----~~~i~~t~G~~~al~~~~~~~~~-----------~gd~Vlv~~p~ 120 (387)
T PRK08912 57 NQYPPMMGLPELRQAVAAHYARFQGLDLDP-----ETEVMVTSGATEALAAALLALVE-----------PGDEVVLFQPL 120 (387)
T ss_pred CCCCCCCCcHHHHHHHHHHHHHHhCCCCCC-----cccEEEeCCcHHHHHHHHHHhcC-----------CCCEEEEeCCC
Confidence 345555567889999999999888875432 2 678999999888655554322 55678889999
Q ss_pred chHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC---hhHHHHHHHH
Q 048643 201 HCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP---LKPLCDVAKQ 277 (506)
Q Consensus 201 H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp---l~~I~~ia~~ 277 (506)
|..+...++.+|. +++.+|++++ ++.+|++.|++.+.+. +.+|+++.++|+||.+-+ +++|+++|++
T Consensus 121 y~~~~~~~~~~g~---~~~~~~~~~~-~~~~~~~~l~~~~~~~------~~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~ 190 (387)
T PRK08912 121 YDAYLPLIRRAGG---VPRLVRLEPP-HWRLPRAALAAAFSPR------TKAVLLNNPLNPAGKVFPREELALLAEFCQR 190 (387)
T ss_pred chhhHHHHHHcCC---EEEEEecCcc-cCcCCHHHHHHHhCcc------ceEEEEeCCCCCcCcccCHHHHHHHHHHHHH
Confidence 9999999999999 9999998743 5789999999988643 336777899999999865 7789999999
Q ss_pred hCCEEEeecccccccccCccchhh--hcCCCCCCeeEEcCccccCCC-CcceEEEEeCchhHHhhhcCCccccCCccccC
Q 048643 278 FGIWVHVDAAYAGSACICPEFQHF--IDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSALVSSLSTNPEYLKNKATES 354 (506)
Q Consensus 278 ~g~~lhVDaA~gg~~~~~~~~~~~--~~gi~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~ 354 (506)
|++++++|.+|+....-....... +.+...-+.+..++.|.++.| ..+|+++... ... +.+.....+..
T Consensus 191 ~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~-~~~-~~l~~~~~~~~------ 262 (387)
T PRK08912 191 HDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFSLTGWKVGFVCAAP-PLL-RVLAKAHQFLT------ 262 (387)
T ss_pred CCeEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechhhccCcCceeEEEecCH-HHH-HHHHHHHhhcc------
Confidence 999999999997543211111111 112223456778899998844 5688887743 222 22211100000
Q ss_pred CCccCCCCccccCCCCCCchHHHHHHHHh--chhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c--c-eEEEeecCCCc
Q 048643 355 KQVVDYKDWQITLSRRFRSLKLWLVIRNY--GVANLRHFLRSHVNMAKLFERLVASDKRVS---P--S-AVMDKLKPKYE 426 (506)
Q Consensus 355 ~~~~~~~~~~~~~sr~~~al~~~~~l~~~--G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p--~-~v~f~~~~~~~ 426 (506)
+ ..+ +....+....+ ..+.+++..++..+..+++.+.|++. +++ | + .+++++.+.+.
T Consensus 263 --------~--~~~----~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~g~~~l~~~l~~~~~ 327 (387)
T PRK08912 263 --------F--TTP----PNLQAAVAYGLGKPDDYFEGMRADLARSRDRLAAGLRRI-GFPVLPSQGTYFLTVDLAPLGL 327 (387)
T ss_pred --------c--cCC----hHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCcceEEEecccccCC
Confidence 0 001 00111122222 23445677788888899999999887 666 3 3 34444432100
Q ss_pred ccccccccchHHHHHHHHHHHHHHHH-hcCcEEEeeeeE----CCEEEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 048643 427 NCHSQQLVTEEEAINEFNRELLESIN-ASGKAYMTHAVC----GGIYAMRFAVGATLTEERHVMVAWTMVQEQL 495 (506)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~----~g~~~lR~~~~~~~tt~edi~~li~~l~~~~ 495 (506)
.....++.+.+. +.|+....+..+ .+..++|++++. .++.+++.++.|.+..
T Consensus 328 --------------~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~iRl~~~~---~~~~l~~~l~rl~~~l 384 (387)
T PRK08912 328 --------------AEDDVAFCRRLVEEAGVAAIPVSAFYEEDPVTSVVRFCFAK---RDATLDEAVERLAAAR 384 (387)
T ss_pred --------------CCCHHHHHHHHHhcCCEEEecchhhCCCCCCCCEEEEEEeC---CHHHHHHHHHHHHHHH
Confidence 001245666654 457644443333 125799999974 3678888888777654
No 123
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.79 E-value=2e-16 Score=163.79 Aligned_cols=311 Identities=11% Similarity=0.002 Sum_probs=204.0
Q ss_pred hhhHHHHHHHHHHHHHHcCCC-CccccCCCC-cEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHH
Q 048643 128 PAATELENIVMDWLGQMLKLP-KSFLFSGNG-GGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQ 205 (506)
Q Consensus 128 p~~~~lE~~~~~~la~l~g~~-~~~~~~~~~-~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 205 (506)
.+...+.+.+.+|+.+.+|+. .+. . ..++|+|+++++..++.+..+ ++..|+++..++..+.
T Consensus 81 ~G~~~lr~aia~~~~~~~g~~~~~~-----~~~I~it~Gs~~al~~~~~~~~~-----------~gd~Vlv~~P~y~~~~ 144 (410)
T PRK06290 81 NGIQEFKEAAARYMEKVFGVKDIDP-----VTEVIHSIGSKPALAMLPSCFIN-----------PGDVTLMTVPGYPVTG 144 (410)
T ss_pred CCcHHHHHHHHHHHHHHcCCCcCCC-----cceEEEccCHHHHHHHHHHHhCC-----------CCCEEEEeCCCCccHH
Confidence 567899999999999888865 321 1 578888888877665554332 5667888889998888
Q ss_pred HHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC---hhHHHHHHHHhCCEE
Q 048643 206 KAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP---LKPLCDVAKQFGIWV 282 (506)
Q Consensus 206 ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp---l~~I~~ia~~~g~~l 282 (506)
..++..|. +++.+|+++++++.+|++.|++++.+. +.+|+++.++|+||.+-+ +++|+++|++||+|+
T Consensus 145 ~~~~~~g~---~v~~v~~~~~~~~~~d~~~l~~~~~~~------~k~i~l~nP~NPTG~v~s~e~l~~l~~la~~~~~~i 215 (410)
T PRK06290 145 THTKYYGG---EVYNLPLLEENNFLPDLDSIPKDIKEK------AKLLYLNYPNNPTGAVATKEFYEEVVDFAKENNIIV 215 (410)
T ss_pred HHHHHcCC---EEEEEecCCCcCCcCCHHHHHHhhccc------ceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCeEE
Confidence 99999999 999999987656889999999888643 347888889999999966 688888899999999
Q ss_pred EeecccccccccCccchhh--hcCCCCCCeeEEcCccccCCC-CcceEEEEeCchhHHhhhcCCccccCCccccCCCccC
Q 048643 283 HVDAAYAGSACICPEFQHF--IDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVD 359 (506)
Q Consensus 283 hVDaA~gg~~~~~~~~~~~--~~gi~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 359 (506)
++|.+|+....- ...... +.+....+.+..++.|.++.| .-+|+++. ++..+ ..+.....+...
T Consensus 216 I~DEaY~~~~~~-~~~~s~~~~~~~~~~~I~i~SfSK~~g~~GlRiG~ii~-~~~l~-~~l~~~~~~~~~---------- 282 (410)
T PRK06290 216 VQDAAYAALTFD-GKPLSFLSVPGAKEVGVEIHSLSKAYNMTGWRLAFVVG-NELIV-KAFATVKDNNDS---------- 282 (410)
T ss_pred EEecchhhceeC-CCCcChhcCCCccccEEEEeechhhcCCchhheEeEEe-CHHHH-HHHHHHHhcccc----------
Confidence 999999765321 111111 111123446677789999644 55787765 33322 222211111100
Q ss_pred CCCccccCCCCCCchHHHHHHHHhc-hhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c--ceEEE-eecCCCccccccc
Q 048643 360 YKDWQITLSRRFRSLKLWLVIRNYG-VANLRHFLRSHVNMAKLFERLVASDKRVS---P--SAVMD-KLKPKYENCHSQQ 432 (506)
Q Consensus 360 ~~~~~~~~sr~~~al~~~~~l~~~G-~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p--~~v~f-~~~~~~~~~~~~~ 432 (506)
.. ..+...++...+- .+.+++..++..+.++++.+.|++. ++. | +.+.| ++.+...+
T Consensus 283 ------~~----~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~p~g~f~l~v~lp~~~~~----- 346 (410)
T PRK06290 283 ------GQ----FIAIQKAGIYALDHPEITEKIREKYSRRLDKLVKILNEV-GFKAEMPGGTFYLYVKAPKGTKS----- 346 (410)
T ss_pred ------CC----cHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHHHHHHhC-CCeecCCCeeeEEEEECCCcccc-----
Confidence 00 0111122223221 2345666777788889999999887 666 4 44443 44321000
Q ss_pred ccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 048643 433 LVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAF 498 (506)
Q Consensus 433 ~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l 498 (506)
... .....++.+.|.++|.+.+.+.... ..++|++++.+..++++.++++++|++...++
T Consensus 347 -~~~----~~~~~~~~~~Ll~~~~v~~~p~~~~-~~~lRi~~~~~~~~~~~~~~~~~~l~~~~~~~ 406 (410)
T PRK06290 347 -GIK----FENAEEFSQYLIKEKLISTVPWDDA-GHFLRFSVTFEAKDEEEEDRILEEIKRRLSDV 406 (410)
T ss_pred -CCC----CCCHHHHHHHHHHhCCEEEECCccc-cCeEEEEEEcccccccchhHHHHHHHHHHhhc
Confidence 000 0013467788888777655443222 25899999988889999999999999887665
No 124
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.78 E-value=1.8e-16 Score=167.26 Aligned_cols=315 Identities=13% Similarity=0.084 Sum_probs=200.7
Q ss_pred ccChhhHHHHHHHHHHHHHHcC----CCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCC
Q 048643 125 ISSPAATELENIVMDWLGQMLK----LPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQT 200 (506)
Q Consensus 125 ~~~p~~~~lE~~~~~~la~l~g----~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~ 200 (506)
....+..++.+++.+|+.+..| ++++ ..++|+|+++++...+.+..+ ++..|+++...
T Consensus 91 ~~~~G~~~LR~aiA~~l~~~~g~~v~v~pe-------~Ivit~Ga~~al~~l~~~l~~-----------pGD~Vlv~~P~ 152 (496)
T PLN02376 91 QDYHGLKKFRQAIAHFMGKARGGKVTFDPE-------RVVMSGGATGANETIMFCLAD-----------PGDVFLIPSPY 152 (496)
T ss_pred CCCCCcHHHHHHHHHHHHHHhCCCCcCChh-------hEEEccchHHHHHHHHHHhCC-----------CCCEEEECCCC
Confidence 3344567899999999999887 3333 789999999888776665543 67788899999
Q ss_pred chHHHHHHH-HhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC---hhHHHHHHH
Q 048643 201 HCALQKAAQ-IVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP---LKPLCDVAK 276 (506)
Q Consensus 201 H~s~~ka~~-~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp---l~~I~~ia~ 276 (506)
+..+...++ ..|+ +++.||++.++++.+|+++|+++++...+.+..+.+|+++.++|+||.+-+ +++|+++|+
T Consensus 153 Y~~~~~~~~~~~G~---~vv~v~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~ 229 (496)
T PLN02376 153 YAAFDRDLRWRTGV---EIIPVPCSSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVT 229 (496)
T ss_pred ccchHHHHHhhCCC---EEEEEeCCCCccCcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHH
Confidence 999988777 4799 999999975556899999999888665444455667788899999999965 677888999
Q ss_pred HhCCEEEeecccccccccCccchh---hhcCCC--C--CCe--eEEcCccccCCC-CcceEEEEeCchhHHhhhcCCccc
Q 048643 277 QFGIWVHVDAAYAGSACICPEFQH---FIDGVE--G--ADS--FSLNAHKWFFTT-LDCCCLWVKDPSALVSSLSTNPEY 346 (506)
Q Consensus 277 ~~g~~lhVDaA~gg~~~~~~~~~~---~~~gi~--~--aDs--i~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~y 346 (506)
+|++++++|.+|+....-.+.+.. ...... . .+. +..++.|.++.| +.+|+++..++.. ...+.....+
T Consensus 230 ~~~i~lI~DEiY~~~~f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpGlRvG~li~~~~~l-~~~~~~~~~~ 308 (496)
T PLN02376 230 RKNIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFNDSV-VSCARKMSSF 308 (496)
T ss_pred HcCCEEEEEcCccccccCCCCcccHHHhhccccccccCCCeEEEEEeccccCCCCcceEEEEEECCHHH-HHHHHHHhhc
Confidence 999999999999875432222211 111000 1 122 356899999744 8899988865543 2222111111
Q ss_pred cCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchh-----HHHHHHHHHHHHHHHHHHHHHcCCCCc---c--ce
Q 048643 347 LKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVA-----NLRHFLRSHVNMAKLFERLVASDKRVS---P--SA 416 (506)
Q Consensus 347 l~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~-----g~~~~i~~~~~~a~~l~~~l~~~~~~~---p--~~ 416 (506)
.. ...+..+++...+... .+.+..++..+..+.+.+.|++. +++ | +.
T Consensus 309 ~~----------------------vs~~~Q~a~~~~L~d~~~~~~~l~~~r~~l~~r~~~l~~~L~~~-gi~~~~~~aG~ 365 (496)
T PLN02376 309 GL----------------------VSSQTQLMLASMLSDDQFVDNFLMESSRRLGIRHKVFTTGIKKA-DIACLTSNAGL 365 (496)
T ss_pred CC----------------------CCHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCcccCCCceE
Confidence 00 0112223333333222 22333555566677788888775 555 4 33
Q ss_pred EEE-eecCCCcccccccccchHHHHHHHHHHHHHHHHhc-CcEEEeeee-E--CCEEEEEEEecCCCCCHHHHHHHHHHH
Q 048643 417 VMD-KLKPKYENCHSQQLVTEEEAINEFNRELLESINAS-GKAYMTHAV-C--GGIYAMRFAVGATLTEERHVMVAWTMV 491 (506)
Q Consensus 417 v~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~-~--~g~~~lR~~~~~~~tt~edi~~li~~l 491 (506)
++| ++.+.. ......+...++.+.+.++ |+ .+.++. + .+.+++|+|+.+ .+++.++..++.|
T Consensus 366 flwi~l~~~~----------~~~~~~~~e~~l~~~ll~~~gV-~v~pGs~F~~~~~g~~Ri~fa~--~~~~~l~~al~rl 432 (496)
T PLN02376 366 FAWMDLRHLL----------RDRNSFESEIELWHIIIDKVKL-NVSPGSSFRCTEPGWFRICFAN--MDDDTLHVALGRI 432 (496)
T ss_pred EEEEEchhhh----------ccCCchhHHHHHHHHHHHcCCE-EEeCccccCCCCCCEEEEEeeC--CCHHHHHHHHHHH
Confidence 333 332210 0000001124566666665 55 455543 3 246799999965 3567899888888
Q ss_pred HHHHHH
Q 048643 492 QEQLEA 497 (506)
Q Consensus 492 ~~~~~~ 497 (506)
.++.++
T Consensus 433 ~~~l~~ 438 (496)
T PLN02376 433 QDFVSK 438 (496)
T ss_pred HHHHHH
Confidence 887754
No 125
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.78 E-value=2.5e-16 Score=162.23 Aligned_cols=325 Identities=11% Similarity=0.064 Sum_probs=204.8
Q ss_pred HHHHHHHhhcC-CCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcc
Q 048643 108 FLGEMLSSGFN-VVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGR 186 (506)
Q Consensus 108 ~~~~~l~~~~n-~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~ 186 (506)
.+.+.+..+++ .....|....+...+.+.+.+++++.+|.+.+. ....++|+|+++++..++.+..+
T Consensus 44 ~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~----~~~i~~t~G~~~~l~~~~~~~~~-------- 111 (389)
T PRK05957 44 EAIEALNNFLANPENHKYQAVQGIPPLLEAITQKLQQDNGIELNN----EQAIVVTAGSNMAFMNAILAITD-------- 111 (389)
T ss_pred HHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC----CCeEEEeCChHHHHHHHHHHhcC--------
Confidence 34455544442 222345555667788899999999999974220 02678899988887666554422
Q ss_pred cCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCccc
Q 048643 187 ENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVD 266 (506)
Q Consensus 187 ~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~id 266 (506)
++..|+++...+......++..|+ +++.+|.+. ++.+|+++|++++++.+ .+|+++.++|+||.+-
T Consensus 112 ---~gd~Vlv~~P~y~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~i~~~~------klv~~~~p~NPtG~~~ 177 (389)
T PRK05957 112 ---PGDEIILNTPYYFNHEMAITMAGC---QPILVPTDD--NYQLQPEAIEQAITPKT------RAIVTISPNNPTGVVY 177 (389)
T ss_pred ---CCCEEEEeCCCCcCHHHHHHhcCC---EEEEeecCC--CCCcCHHHHHHhcCcCc------eEEEEeCCCCCCCcCc
Confidence 566788888888777777888899 999999863 57899999999986543 3778888999999997
Q ss_pred C---hhHHHHHHHHhCCEEEeecccccccccCccchhhhc--CCCCCCeeEEcCccccCCC-CcceEEEEeCchhHHhhh
Q 048643 267 P---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFID--GVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSALVSSL 340 (506)
Q Consensus 267 p---l~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~--gi~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~ 340 (506)
| +++|+++|++||+++++|.+|+.+..-......... ....-..+..++.|.++.| .-+|++++.+. . .+.+
T Consensus 178 ~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~-~-~~~~ 255 (389)
T PRK05957 178 PEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGFASWRIGYMVIPIH-L-LEAI 255 (389)
T ss_pred CHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecchhhccCccceeEEEecCHH-H-HHHH
Confidence 7 899999999999999999999755432111111111 1111113345577988644 55888877432 2 2233
Q ss_pred cCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHh--chhHHHHHHHHHHHHHHHHHHHHHcCCCC-c---c
Q 048643 341 STNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNY--GVANLRHFLRSHVNMAKLFERLVASDKRV-S---P 414 (506)
Q Consensus 341 ~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--G~~g~~~~i~~~~~~a~~l~~~l~~~~~~-~---p 414 (506)
.....+... +. ..+.-..+...+ +.+.+++.+++..++.+++.+.|++++++ . |
T Consensus 256 ~~~~~~~~~-----------------~~---~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~ 315 (389)
T PRK05957 256 KKIQDTILI-----------------CP---PVVSQYAALGALQVGKSYCQQHLPEIAQVRQILLKSLGQLQDRCTLHPA 315 (389)
T ss_pred HHHHhhccc-----------------CC---CcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhcCCCccccCC
Confidence 211111100 00 112223333333 33456777788888899999999887764 4 4
Q ss_pred --ceE-EEeecCCCcccccccccchHHHHHHHHHHHHHHHHh-cCcEEEeeeeE--CCEEEEEEEecCCCCCHHHHHHHH
Q 048643 415 --SAV-MDKLKPKYENCHSQQLVTEEEAINEFNRELLESINA-SGKAYMTHAVC--GGIYAMRFAVGATLTEERHVMVAW 488 (506)
Q Consensus 415 --~~v-~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~--~g~~~lR~~~~~~~tt~edi~~li 488 (506)
+.+ .+++.+. ....++.+++.+ .|+....+..+ .+..++|+++.. .+++++.+.+
T Consensus 316 ~gg~~~~~~~~~~-----------------~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~--~~~~~l~~~~ 376 (389)
T PRK05957 316 NGAFYCFLKVNTD-----------------LNDFELVKQLIREYRVAVIPGTTFGMKNGCYLRIAYGA--LQKATAKEGI 376 (389)
T ss_pred CeeEEEEEeCCCC-----------------CChHHHHHHHHHHCCEEEccchhhCCCCCCEEEEEEec--CCHHHHHHHH
Confidence 333 3344221 013456666654 57654433322 224589999954 3577888888
Q ss_pred HHHHHHHHHHH
Q 048643 489 TMVQEQLEAFL 499 (506)
Q Consensus 489 ~~l~~~~~~l~ 499 (506)
+.|.+..+++.
T Consensus 377 ~~l~~~~~~~~ 387 (389)
T PRK05957 377 ERLVQGLKTIV 387 (389)
T ss_pred HHHHHHHHhhh
Confidence 88888776654
No 126
>PRK07777 aminotransferase; Validated
Probab=99.78 E-value=1e-16 Score=165.13 Aligned_cols=320 Identities=12% Similarity=0.051 Sum_probs=203.4
Q ss_pred HHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCe
Q 048643 113 LSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKL 192 (506)
Q Consensus 113 l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~ 192 (506)
+...+......|...++..++++.+.+|+.+.+|++... ....++|+|+++++..++.+... ++.
T Consensus 46 ~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~----~~~i~~t~G~~~al~~~~~~~~~-----------~gd 110 (387)
T PRK07777 46 AQEAIAGGVNQYPPGPGIPELRAAIAAQRRRRYGLEYDP----DTEVLVTVGATEAIAAAVLGLVE-----------PGD 110 (387)
T ss_pred HHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC----CCcEEEeCCcHHHHHHHHHHhcC-----------CCC
Confidence 333333333456666678899999999999998876431 01578999999998766654322 455
Q ss_pred EEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCC-CCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc---cCh
Q 048643 193 VVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKS-SSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV---DPL 268 (506)
Q Consensus 193 ~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~-~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i---dpl 268 (506)
.|+++...|.....+++..|. +++.+|.+++ .++.+|+++|++++.+. +.+|+++.++|+||.+ +++
T Consensus 111 ~vli~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~~d~~~l~~~~~~~------~~~v~l~~p~NPtG~~~~~~~~ 181 (387)
T PRK07777 111 EVLLIEPYYDSYAAVIAMAGA---HRVPVPLVPDGRGFALDLDALRAAVTPR------TRALIVNSPHNPTGTVLTAAEL 181 (387)
T ss_pred EEEEeCCCchhhHHHHHHCCC---EEEEeecCCccCCCcCCHHHHHHhcCcc------cEEEEEcCCCCCCCccCCHHHH
Confidence 677788889889999999999 9999998764 25789999999988653 3367778899999998 458
Q ss_pred hHHHHHHHHhCCEEEeecccccccccCccchhh--hcCCCCCCeeEEcCccccCCC-CcceEEEEeCchhHHhhhcCCcc
Q 048643 269 KPLCDVAKQFGIWVHVDAAYAGSACICPEFQHF--IDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSALVSSLSTNPE 345 (506)
Q Consensus 269 ~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~--~~gi~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~ 345 (506)
++|+++|++|++++++|.+|+............ +.+....+.+..+++|.++.| ..+|+++... . +.+.+.....
T Consensus 182 ~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~-~-l~~~~~~~~~ 259 (387)
T PRK07777 182 AAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAKTFNVTGWKIGWACGPA-P-LIAAVRAAKQ 259 (387)
T ss_pred HHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCCcCcEEEEeechhhccCcCceeEEEecCH-H-HHHHHHHHHh
Confidence 999999999999999999997654311111111 122234567788899999855 5578776543 2 2222221111
Q ss_pred ccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c--ce-EEE
Q 048643 346 YLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS---P--SA-VMD 419 (506)
Q Consensus 346 yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p--~~-v~f 419 (506)
|... . .+.. ....+-..+. .+.+.++++.+...++++++.+.|++. +++ | +. +++
T Consensus 260 ~~~~--------------~--~~~~-~q~~~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~g~~~~~~ 320 (387)
T PRK07777 260 YLTY--------------V--GGAP-FQPAVAHALD-HEDAWVAALRDSLQAKRDRLAAGLAEA-GFEVHDSAGTYFLCA 320 (387)
T ss_pred hccc--------------C--CCCH-HHHHHHHHHh-CCcHHHHHHHHHHHHHHHHHHHHHHhC-CCCccCCCcceEEEe
Confidence 1110 0 0000 0011111111 234566777788888999999999886 666 3 33 333
Q ss_pred eecCCCcccccccccchHHHHHHHHHHHHHHHHh-cCcEEEeeeeE-----CCEEEEEEEecCCCCCHHHHHHHHHHHHH
Q 048643 420 KLKPKYENCHSQQLVTEEEAINEFNRELLESINA-SGKAYMTHAVC-----GGIYAMRFAVGATLTEERHVMVAWTMVQE 493 (506)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~-----~g~~~lR~~~~~~~tt~edi~~li~~l~~ 493 (506)
++.+.+ .....++.+.|.+ .|+....+..+ .+..++|+++.. .++++++.++.|.+
T Consensus 321 ~~~~~~---------------~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~~~Ri~~~~---~~~~l~~~l~~l~~ 382 (387)
T PRK07777 321 DPRPLG---------------YDDGTEFCRALPERVGVAAIPMSVFYDPADAWNHLVRFAFCK---RDDTLDEAIRRLRA 382 (387)
T ss_pred cccccC---------------CCCHHHHHHHHHHhCCEEEeCchHhCCCCcCCCCeEEEEecC---CHHHHHHHHHHHHH
Confidence 443210 0012456667754 46643333222 124689999953 57789999888877
Q ss_pred HH
Q 048643 494 QL 495 (506)
Q Consensus 494 ~~ 495 (506)
+.
T Consensus 383 ~~ 384 (387)
T PRK07777 383 LR 384 (387)
T ss_pred Hh
Confidence 64
No 127
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.78 E-value=2.4e-16 Score=160.46 Aligned_cols=286 Identities=11% Similarity=0.047 Sum_probs=180.6
Q ss_pred HHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhC
Q 048643 133 LENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVG 212 (506)
Q Consensus 133 lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G 212 (506)
+..++.+.+++++|.+ ..+++++|+++++.++.++.. ++..|+++...|.+...+++..|
T Consensus 62 ~~~~l~~~la~~~~~~---------~~i~~~~G~~~~~~~l~~~~~-----------~gd~v~~~~~~~~~~~~~~~~~g 121 (360)
T TIGR00858 62 LHEELEEELAEWKGTE---------AALLFSSGYLANVGVISALVG-----------KGDLILSDALNHASLIDGCRLSG 121 (360)
T ss_pred HHHHHHHHHHHHhCCC---------CEEEECchHHHHHHHHHHhCC-----------CCCEEEEEccccHHHHHHHHhcC
Confidence 3444556666666643 245666668888765544322 55678888899999999999999
Q ss_pred CCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeeccccccc
Q 048643 213 IDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSA 292 (506)
Q Consensus 213 ~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~ 292 (506)
. +++.++ .+|++.|++++++.. +..+.+|+.....+++|.+.|+++|.++|+++|+++++|++|+.+.
T Consensus 122 ~---~~~~~~-------~~d~~~l~~~~~~~~--~~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~li~De~~~~~~ 189 (360)
T TIGR00858 122 A---RVRRYR-------HNDVEHLERLLEKNR--GERRKLIVTDGVFSMDGDIAPLPQLVALAERYGAWLMVDDAHGTGV 189 (360)
T ss_pred C---ceEEec-------CCCHHHHHHHHHHcc--cCCCeEEEEeCCccCCCCCcCHHHHHHHHHHcCcEEEEECcccccC
Confidence 8 888776 358899999987532 1124567777778899999999999999999999999999997443
Q ss_pred ccCccc-hhhhcCC--CCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcC-CccccCCccccCCCccCCCCccccCC
Q 048643 293 CICPEF-QHFIDGV--EGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLST-NPEYLKNKATESKQVVDYKDWQITLS 368 (506)
Q Consensus 293 ~~~~~~-~~~~~gi--~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~s 368 (506)
...... .....++ ...|.+..+++|+++.+ + |+++.+ ++.. +.+.. ...+. ...+
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~-g-G~~~~~-~~~~-~~~~~~~~~~~-----------------~~~~ 248 (360)
T TIGR00858 190 LGEDGRGTLEHFGLKPEPVDIQVGTLSKALGSY-G-AYVAGS-QALI-DYLINRARTLI-----------------FSTA 248 (360)
T ss_pred cCCCCCchHHhcCCCccCCcEEEEechhhhhcc-C-cEEEcC-HHHH-HHHHHhCccce-----------------ecCC
Confidence 211100 0011122 25678888999999863 3 665543 3322 22211 11111 0111
Q ss_pred CC-CCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc--c---ceEEEeecCCCcccccccccchHHHHHH
Q 048643 369 RR-FRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS--P---SAVMDKLKPKYENCHSQQLVTEEEAINE 442 (506)
Q Consensus 369 r~-~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~--p---~~v~f~~~~~~~~~~~~~~~~~~~~~~~ 442 (506)
.. .....+..+++.+. ...++.++..++.+++.+.|++. +++ | +++.+.+... .
T Consensus 249 ~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~-----------------~ 308 (360)
T TIGR00858 249 LPPAVAAAALAALELIQ--EEPWRREKLLALIARLRAGLEAL-GFTLMPSCTPIVPVIIGDN-----------------A 308 (360)
T ss_pred CCHHHHHHHHHHHHHHh--hCHHHHHHHHHHHHHHHHHHHHc-CCccCCCCCCEEEEEeCCH-----------------H
Confidence 11 11123334444332 23567788999999999999987 565 3 6666665321 1
Q ss_pred HHHHHHHHHHhcCcEEEeeee---ECCEEEEEEEecCCCCCHHHHHHHHHHHH
Q 048643 443 FNRELLESINASGKAYMTHAV---CGGIYAMRFAVGATLTEERHVMVAWTMVQ 492 (506)
Q Consensus 443 ~~~~l~~~l~~~g~~~~~~~~---~~g~~~lR~~~~~~~tt~edi~~li~~l~ 492 (506)
...++.++|.++|+....... ..+..++|+++. ...+++++++++++|+
T Consensus 309 ~~~~~~~~l~~~gI~v~~~~~~~~~~~~~~iRis~~-~~~~~~~i~~~l~~l~ 360 (360)
T TIGR00858 309 SALALAEELQQQGIFVGAIRPPTVPAGTSRLRLTLS-AAHTPGDIDRLAEALK 360 (360)
T ss_pred HHHHHHHHHHHCCeeEeeeCCCCCCCCCceEEEEEc-CCCCHHHHHHHHHhhC
Confidence 235677778777764332111 234568999995 4567789999998763
No 128
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.78 E-value=1.1e-16 Score=155.14 Aligned_cols=327 Identities=14% Similarity=0.062 Sum_probs=218.1
Q ss_pred HHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhc
Q 048643 106 AGFLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIG 185 (506)
Q Consensus 106 ~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~ 185 (506)
|..+.+.+...++...+.|.. ....+-+.+.+|.++.+++.... ...++++| .+.++..+.+.+.+
T Consensus 40 pp~i~~Al~~rvdhGvfGY~~--~~~~~~~ai~~w~~~r~~~~i~~-----e~i~~~p~----VVpgi~~~I~~~T~--- 105 (388)
T COG1168 40 PPEIIEALRERVDHGVFGYPY--GSDELYAAIAHWFKQRHQWEIKP-----EWIVFVPG----VVPGISLAIRALTK--- 105 (388)
T ss_pred CHHHHHHHHHHHhcCCCCCCC--CCHHHHHHHHHHHHHhcCCCCCc-----ceEEEcCc----chHhHHHHHHHhCc---
Confidence 344566677777666666652 23568888999999999987653 25555555 45566665554322
Q ss_pred ccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecC-CCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCc
Q 048643 186 RENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTT-KSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITA 264 (506)
Q Consensus 186 ~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~-~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~ 264 (506)
++.-|++..+.++.+.++....|- +++..|.. .++.+.||.++||+++.+.. +.+.+.+.++|++|.
T Consensus 106 ----~gd~Vvi~tPvY~PF~~~i~~n~R---~~i~~pL~~~~~~y~iD~~~LE~~~~~~~-----vkl~iLCnPHNP~Gr 173 (388)
T COG1168 106 ----PGDGVVIQTPVYPPFYNAIKLNGR---KVIENPLVEDDGRYEIDFDALEKAFVDER-----VKLFILCNPHNPTGR 173 (388)
T ss_pred ----CCCeeEecCCCchHHHHHHhhcCc---EEEeccccccCCcEEecHHHHHHHHhcCC-----ccEEEEeCCCCCCCc
Confidence 556677777899999999999888 99999886 34568899999999998763 237899999999999
Q ss_pred c---cChhHHHHHHHHhCCEEEeecccccccccCccchhhh-cCCCCC-Cee-EEcCccccCCC-CcceEEEEeCchhHH
Q 048643 265 V---DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFI-DGVEGA-DSF-SLNAHKWFFTT-LDCCCLWVKDPSALV 337 (506)
Q Consensus 265 i---dpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~-~gi~~a-Dsi-~~~~hK~l~~p-~~~g~~~~r~~~~l~ 337 (506)
+ +.|.+|++||++||+.++.|..|+-..+....+-... -.-..+ -++ +.++.|.++.+ ..|+.+++.|++...
T Consensus 174 vwt~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~~lr~ 253 (388)
T COG1168 174 VWTKEELRKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNRELRA 253 (388)
T ss_pred cccHHHHHHHHHHHHHcCCEEEeecccccccccCCCccchhhcChhhhcceEEEeeccccccchhhhheeEEecCHHHHH
Confidence 9 8899999999999999999999876544331111000 001112 244 44579999854 678888888876422
Q ss_pred hhhcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHH--HHhchhHHHHHHHHHHHHHHHHHHHHHc-CCCCc-
Q 048643 338 SSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVI--RNYGVANLRHFLRSHVNMAKLFERLVAS-DKRVS- 413 (506)
Q Consensus 338 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l--~~~G~~g~~~~i~~~~~~a~~l~~~l~~-~~~~~- 413 (506)
.+...-..... -...++++-+.. -..|.+++.++++....+.+++.+.+.+ +|+++
T Consensus 254 -~~~~~l~~~~~-------------------~~~n~lg~~A~~aAY~~G~~WLd~L~~yl~~N~~~~~~~l~~~~P~v~v 313 (388)
T COG1168 254 -KFLKRLKRNGL-------------------HGPSALGIIATEAAYNQGEPWLDELLEYLKDNRDYVADFLNKHLPGVKV 313 (388)
T ss_pred -HHHHHHHHhcC-------------------CCCchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhhCCCcEE
Confidence 22111111110 012334443333 3459999999999999999999999976 57877
Q ss_pred --c-ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeE---CCEEEEEEEecCCCCCHHHHHHH
Q 048643 414 --P-SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVC---GGIYAMRFAVGATLTEERHVMVA 487 (506)
Q Consensus 414 --p-~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~---~g~~~lR~~~~~~~tt~edi~~l 487 (506)
| +....++.=... .-...++.+.|+++.++.++.+.. .|.+++|+.+. ++++-+++.
T Consensus 314 ~~p~gTYL~WLD~r~l--------------~l~d~~l~~~ll~~akVal~~G~~FG~~g~gf~RlN~a---cpr~~L~ea 376 (388)
T COG1168 314 TEPQGTYLAWLDCREL--------------GLDDSELAEFLLEEAKVALSPGSTFGEEGSGFVRLNFA---CPRAILEEA 376 (388)
T ss_pred ecCCCceeeeeecccc--------------CCChHHHHHHHHHhhcEeccCCCccCcCCCceEEEecC---CCHHHHHHH
Confidence 6 444443321100 001145666777778888877654 35789999764 566666666
Q ss_pred HHHHHHHH
Q 048643 488 WTMVQEQL 495 (506)
Q Consensus 488 i~~l~~~~ 495 (506)
++.|.+..
T Consensus 377 l~ri~~al 384 (388)
T COG1168 377 LERLKRAL 384 (388)
T ss_pred HHHHHHHH
Confidence 66665443
No 129
>PRK09082 methionine aminotransferase; Validated
Probab=99.78 E-value=4.9e-17 Score=167.39 Aligned_cols=317 Identities=9% Similarity=0.018 Sum_probs=202.8
Q ss_pred HHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccC
Q 048643 109 LGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGREN 188 (506)
Q Consensus 109 ~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~ 188 (506)
+.+.+...+......|....+..++++.+.+|+.+++|.+... ....++|+|+++++..++.+...
T Consensus 48 ~~~~~~~~~~~~~~~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~----~~~i~~t~G~~~al~~~~~~~~~---------- 113 (386)
T PRK09082 48 LVEALAYAMAAGHNQYPPMTGVAALREAIAAKTARLYGRQYDA----DSEITVTAGATEALFAAILALVR---------- 113 (386)
T ss_pred HHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCC----CCcEEEeCCHHHHHHHHHHHHcC----------
Confidence 3344444443333456555677899999999999999975421 01588999999998877765432
Q ss_pred CCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc---
Q 048643 189 ISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV--- 265 (506)
Q Consensus 189 ~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i--- 265 (506)
++..|+++...|.++..+++..|. +++.+|++.+ ++.+|+++|++++++. +.+|+++.++|+||.+
T Consensus 114 -~gd~Vli~~p~y~~~~~~~~~~g~---~~~~~~~~~~-~~~~d~~~l~~~~~~~------~~~v~l~~p~NPtG~~~~~ 182 (386)
T PRK09082 114 -PGDEVIVFDPSYDSYAPAIELAGG---RAVRVALQPP-DFRVDWQRFAAAISPR------TRLIILNTPHNPSGTVWSA 182 (386)
T ss_pred -CCCEEEEeCCCchhhHHHHHHcCC---EEEEEecCcc-cccCCHHHHHHhcCcc------ceEEEEeCCCCCCCcCCCH
Confidence 566788899999999999999999 9999999753 5899999999988653 3467778889999987
Q ss_pred cChhHHHHHHHHhCCEEEeecccccccccCccchhh--hcCCCCCCeeEEcCccccCCC-CcceEEEEeCchhHHhhhcC
Q 048643 266 DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHF--IDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSALVSSLST 342 (506)
Q Consensus 266 dpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~--~~gi~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~ 342 (506)
+++++|+++|++||+|+++|.+|+....-....... +.+...-..+..++.|.++.| ..+|+++.. ++.+ ..+..
T Consensus 183 ~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~iv~~-~~l~-~~~~~ 260 (386)
T PRK09082 183 ADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYHVTGWKVGYCVAP-AALS-AEFRK 260 (386)
T ss_pred HHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhccchhhhhhhhhCC-HHHH-HHHHH
Confidence 789999999999999999999997543311111111 112222335556789999744 567877764 3322 22221
Q ss_pred CccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHh--chhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c--c
Q 048643 343 NPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNY--GVANLRHFLRSHVNMAKLFERLVASDKRVS---P--S 415 (506)
Q Consensus 343 ~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p--~ 415 (506)
...+.. ++ ...+..+++...+ ..+.++++.+...++.+++.+.|++. +++ | +
T Consensus 261 ~~~~~~--------------~~------~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~~~g~ 319 (386)
T PRK09082 261 VHQYNT--------------FT------VNTPAQLALADYLRAEPEHYLELPAFYQAKRDRFRAALANS-RFKLLPCEGT 319 (386)
T ss_pred HHhhhc--------------CC------CChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCee
Confidence 111110 00 0111112222222 34556677777788889999999885 666 3 3
Q ss_pred e-EEEeecC-CCcccccccccchHHHHHHHHHHHHHHHH-hcCcEEEeeee-E----CCEEEEEEEecCCCCCHHHHHHH
Q 048643 416 A-VMDKLKP-KYENCHSQQLVTEEEAINEFNRELLESIN-ASGKAYMTHAV-C----GGIYAMRFAVGATLTEERHVMVA 487 (506)
Q Consensus 416 ~-v~f~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~-~----~g~~~lR~~~~~~~tt~edi~~l 487 (506)
. +++++.. .+ ....++.+.+. +.|+ .+.+.. + .+..++|++++. +++++++.
T Consensus 320 ~~~~~~~~~~~~----------------~~~~~~~~~l~~~~~v-~v~pg~~f~~~~~~~~~~Ri~~~~---~~~~l~~~ 379 (386)
T PRK09082 320 YFQLVDYSAISD----------------LDDVEFCQWLTREHGV-AAIPLSVFYADPFPHRLVRLCFAK---QEETLDAA 379 (386)
T ss_pred EEEEEeccccCC----------------CCHHHHHHHHHHhCCE-EEeCcHHhCCCCCCCCEEEEEecC---CHHHHHHH
Confidence 3 3345431 10 01234555554 4465 444433 3 134689999963 57788888
Q ss_pred HHHHHH
Q 048643 488 WTMVQE 493 (506)
Q Consensus 488 i~~l~~ 493 (506)
++.|++
T Consensus 380 ~~rl~~ 385 (386)
T PRK09082 380 AERLCQ 385 (386)
T ss_pred HHHHhh
Confidence 887764
No 130
>PRK08960 hypothetical protein; Provisional
Probab=99.78 E-value=9.1e-17 Score=165.47 Aligned_cols=322 Identities=13% Similarity=0.033 Sum_probs=198.1
Q ss_pred HHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhc
Q 048643 106 AGFLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIG 185 (506)
Q Consensus 106 ~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~ 185 (506)
+..+.+.+...+......|...++..++.+.+.+|+.+.+|++.+. ...++|+|+++++..++.+...
T Consensus 47 ~~~v~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~-----~~i~it~G~~~al~~~~~~~~~------- 114 (387)
T PRK08960 47 AEPIVAAGQAALAAGHTRYTAARGLPALREAIAGFYAQRYGVDVDP-----ERILVTPGGSGALLLASSLLVD------- 114 (387)
T ss_pred CHHHHHHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHHHhCCCCCh-----hhEEEccCcHHHHHHHHHHhcC-------
Confidence 3444455555554333456666678889999999999888765332 3789999999988776654422
Q ss_pred ccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc
Q 048643 186 RENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV 265 (506)
Q Consensus 186 ~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i 265 (506)
++..|+++..+|.+....++..|. +++.+|++.++++.+|++.|++++++.+ .+|+.+.++|+||.+
T Consensus 115 ----~gd~vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~~~~~~------~~i~i~~p~NPtG~~ 181 (387)
T PRK08960 115 ----PGKHWLLADPGYPCNRHFLRLVEG---AAQLVPVGPDSRYQLTPALVERHWNADT------VGALVASPANPTGTL 181 (387)
T ss_pred ----CCCEEEEcCCCCcchHHHHHhcCC---eEEEEecCcccCCCCCHHHHHHHhCccc------eEEEEECCCCCCCcC
Confidence 567788999999999999999999 9999999765567899999999886543 367778899999998
Q ss_pred cC---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCC-eeEEcCccccC-CCCcceEEEEeCchhHHhhh
Q 048643 266 DP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGAD-SFSLNAHKWFF-TTLDCCCLWVKDPSALVSSL 340 (506)
Q Consensus 266 dp---l~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aD-si~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~ 340 (506)
-+ +++|+++|++||+|+++|.+|..... .+.....+ .+. .+ .+..+++|.++ ....+|+++..+. .+ +.+
T Consensus 182 ~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~-~~~~~~~~-~~~-~~vi~~~S~SK~~g~~GlRiG~~~~~~~-~~-~~~ 256 (387)
T PRK08960 182 LSRDELAALSQALRARGGHLVVDEIYHGLTY-GVDAASVL-EVD-DDAFVLNSFSKYFGMTGWRLGWLVAPPA-AV-PEL 256 (387)
T ss_pred cCHHHHHHHHHHHHHcCCEEEEEcccccccc-CCCCCChh-hcc-CCEEEEeecccccCCcccEEEEEEcCHH-HH-HHH
Confidence 66 56777789999999999999976432 21111111 121 23 34567999986 4456888887532 22 222
Q ss_pred cCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc----c--
Q 048643 341 STNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS----P-- 414 (506)
Q Consensus 341 ~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~----p-- 414 (506)
.....+. ....+. +....+...+.....+.+.+..+...+..+.+.+.|++. ++. |
T Consensus 257 ~~~~~~~----------------~~~~s~-~~q~a~~~~l~~~~~~~l~~~~~~~~~~~~~l~~~L~~~-~~~~~~~p~g 318 (387)
T PRK08960 257 EKLAQNL----------------YISAST-PAQHAALACFEPETLAILEARRAEFARRRDFLLPALREL-GFGIAVEPQG 318 (387)
T ss_pred HHHHhhh----------------ccCCCH-HHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHhc-CCcCCcCCCe
Confidence 1100000 000010 111111122221112445566666777788888998876 443 5
Q ss_pred ceE-EEeecCCCcccccccccchHHHHHHHHHHHHHHHH-hcCcEEEeeeeEC---CEEEEEEEecCCCCCHHHHHHHHH
Q 048643 415 SAV-MDKLKPKYENCHSQQLVTEEEAINEFNRELLESIN-ASGKAYMTHAVCG---GIYAMRFAVGATLTEERHVMVAWT 489 (506)
Q Consensus 415 ~~v-~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~---g~~~lR~~~~~~~tt~edi~~li~ 489 (506)
+.+ .+++.... ....++.+.+. +.|+....+..+. +..++|+++.. +.+.+...++
T Consensus 319 ~~f~~~~~~~~~----------------~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~iRi~~~~---~~~~l~~al~ 379 (387)
T PRK08960 319 AFYLYADISAFG----------------GDAFAFCRHFLETEHVAFTPGLDFGRHQAGQHVRFAYTQ---SLPRLQEAVE 379 (387)
T ss_pred eEEEEEeccccC----------------CCHHHHHHHHHHhCCEEEcCchHhCCCCCCCeEEEEecC---CHHHHHHHHH
Confidence 232 33332110 01245666654 4566444332222 23589999964 4556666666
Q ss_pred HHHHH
Q 048643 490 MVQEQ 494 (506)
Q Consensus 490 ~l~~~ 494 (506)
.|.++
T Consensus 380 ~l~~~ 384 (387)
T PRK08960 380 RIARG 384 (387)
T ss_pred HHHHH
Confidence 55544
No 131
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.78 E-value=1.1e-15 Score=157.30 Aligned_cols=306 Identities=12% Similarity=0.054 Sum_probs=186.7
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHH
Q 048643 127 SPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQK 206 (506)
Q Consensus 127 ~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~k 206 (506)
.+...++| +.+++++|.+. .+++++|+.++..++.+... ++..|++++..|.|+..
T Consensus 42 ~~~~~~LE----~~lA~~~g~e~---------al~~~sG~~a~~~~i~~l~~-----------~GD~Vl~~~~~h~s~~~ 97 (392)
T PLN03227 42 IDAHLELE----QCMAEFLGTES---------AILYSDGASTTSSTVAAFAK-----------RGDLLVVDRGVNEALLV 97 (392)
T ss_pred hHHHHHHH----HHHHHHhCCCc---------EEEecCcHHHHHHHHHHhCC-----------CCCEEEEeccccHHHHH
Confidence 33444555 55777777653 46777778888866665322 67789999999999999
Q ss_pred HHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhc--------CCccEEEEEeccCCCCCcccChhHHHHHHHHh
Q 048643 207 AAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEA--------GLVPLFLCATIGTTAITAVDPLKPLCDVAKQF 278 (506)
Q Consensus 207 a~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~--------g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~ 278 (506)
++.+.+. +++.++.. |++++++.++....+ ...+.+|++....+++|.+-|+++|+++|++|
T Consensus 98 ~~~l~~~---~~~~~~~~-------d~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~~l~~i~~l~~~~ 167 (392)
T PLN03227 98 GVSLSRA---NVRWFRHN-------DMKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLAPLKELVALKEEF 167 (392)
T ss_pred HHHHcCC---eEEEeCCC-------CHHHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCcccCHHHHHHHHHHc
Confidence 9888777 77777643 455555544332211 12356788888889999999999999999999
Q ss_pred CCEEEeecccccccccCccchhh-----hcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcC-CccccCCccc
Q 048643 279 GIWVHVDAAYAGSACICPEFQHF-----IDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLST-NPEYLKNKAT 352 (506)
Q Consensus 279 g~~lhVDaA~gg~~~~~~~~~~~-----~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~-~~~yl~~~~~ 352 (506)
|+++++|++|+.+.+ .+..+.. +....++|.++.+.+|+++ |. .|+++.+ ++. .+.+.. ...+.+
T Consensus 168 g~~livDe~~~~g~~-g~~G~g~~~~~g~~p~~~~Div~~slsk~~g-~~-gg~v~~~-~~~-~~~~~~~~~~~~~---- 238 (392)
T PLN03227 168 HYRLILDESFSFGTL-GKSGRGSLEHAGLKPMVHAEIVTFSLENAFG-SV-GGMTVGS-EEV-VDHQRLSGSGYCF---- 238 (392)
T ss_pred CCEEEEECccccccc-CCCCCcHHHHcCCCCCCCceEEEeechhhhh-cc-CcEEecC-HHH-HHHHHHhCcCccc----
Confidence 999999999973322 1111111 1112468999999999876 32 3444433 322 222211 111111
Q ss_pred cCCCccCCCCccccCCCCCCchHHHHHHHHh-chhHHHHHHHHHHHHHHHHHHHHHcC--C-------CCc-----c-ce
Q 048643 353 ESKQVVDYKDWQITLSRRFRSLKLWLVIRNY-GVANLRHFLRSHVNMAKLFERLVASD--K-------RVS-----P-SA 416 (506)
Q Consensus 353 ~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~-G~~g~~~~i~~~~~~a~~l~~~l~~~--~-------~~~-----p-~~ 416 (506)
+-...++..|+++..+ ......+++++..+++++|++.|++. | ++. + ++
T Consensus 239 ---------------~~~~~p~~~~aa~~al~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~rg~~~~~~~~~~~i 303 (392)
T PLN03227 239 ---------------SASAPPFLAKADATATAGELAGPQLLNRLHDSIANLYSTLTNSSHPYALKLRNRLVITSDPISPI 303 (392)
T ss_pred ---------------cCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCccccccccccccCCCCCCCE
Confidence 1111233344444332 21123567888899999999999752 2 111 1 46
Q ss_pred EEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeee-------eECCEEEEEEEecCCCCCHHHHHHHHH
Q 048643 417 VMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHA-------VCGGIYAMRFAVGATLTEERHVMVAWT 489 (506)
Q Consensus 417 v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~-------~~~g~~~lR~~~~~~~tt~edi~~li~ 489 (506)
+.+.+.+... ...........++.+++.++|....... ..-....+|++++ ...|+|||+++++
T Consensus 304 ~~i~~~~~~~--------~~~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~~~~~~~~P~~~iR~~~~-~~~t~eei~~~~~ 374 (392)
T PLN03227 304 IYLRLSDQEA--------TRRTDETLILDQIAHHSLSEGVAVVSTGGHVKKFLQLVPPPCLRVVAN-ASHTREDIDKLLT 374 (392)
T ss_pred EEEEeCCHHH--------hhhhhhhhHHHHHHHHHHHCCCEEEecccccCCcCCCCCCceEEEEec-CCCCHHHHHHHHH
Confidence 7776643200 0000001234578888888897543210 1122467999995 5566679999999
Q ss_pred HHHHHHHHHH
Q 048643 490 MVQEQLEAFL 499 (506)
Q Consensus 490 ~l~~~~~~l~ 499 (506)
.|+++.+++.
T Consensus 375 ~l~~~~~~~~ 384 (392)
T PLN03227 375 VLGEAVEAIL 384 (392)
T ss_pred HHHHHHHHHH
Confidence 9999988763
No 132
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.78 E-value=5.2e-16 Score=160.64 Aligned_cols=335 Identities=12% Similarity=0.013 Sum_probs=202.9
Q ss_pred HHHHHHHHhhcCCC-CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhc
Q 048643 107 GFLGEMLSSGFNVV-GFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIG 185 (506)
Q Consensus 107 ~~~~~~l~~~~n~~-~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~ 185 (506)
..+.+.+...++.. ...|...++..++.+.+.+|+.+. |.+.. ....++|+|+++++..++.+...
T Consensus 51 ~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~-~~~~~-----~~~i~~t~G~~~al~~~~~~l~~------- 117 (401)
T TIGR01264 51 PEVMQAMKDSLDSGKYNGYAPTVGALSAREAIASYYHNP-DGPIE-----ADDVVLCSGCSHAIEMCIAALAN------- 117 (401)
T ss_pred HHHHHHHHHHHhccCCCCCCCCCCCHHHHHHHHHHHhhc-CCCCC-----HHHEEECcChHHHHHHHHHHhCC-------
Confidence 34444444444332 233555566778888888888763 33221 12678999999988776665432
Q ss_pred ccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc
Q 048643 186 RENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV 265 (506)
Q Consensus 186 ~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i 265 (506)
++..|+++..++..+...++..|+ +++.++++.++++.+|++.|++++++.+ .+|+++.++|+||.+
T Consensus 118 ----~gd~v~i~~P~y~~~~~~~~~~g~---~v~~~~~~~~~~~~~d~~~l~~~~~~~~------~~v~~~~p~NPtG~~ 184 (401)
T TIGR01264 118 ----AGQNILVPRPGFPLYETLAESMGI---EVKLYNLLPDKSWEIDLKQLESLIDEKT------AALIVNNPSNPCGSV 184 (401)
T ss_pred ----CCCEEEEeCCCChhHHHHHHHcCC---EEEEeecCCccCCCCCHHHHHHHhccCc------eEEEEcCCCCCCCCC
Confidence 455677788888888899999999 9999998755567999999998876533 367788899999998
Q ss_pred c---ChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCC-eeEEcCccc-cCCCCcceEEEEeCch-hHHhh
Q 048643 266 D---PLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGAD-SFSLNAHKW-FFTTLDCCCLWVKDPS-ALVSS 339 (506)
Q Consensus 266 d---pl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aD-si~~~~hK~-l~~p~~~g~~~~r~~~-~l~~~ 339 (506)
- ++++|+++|+++|+|+++|.+|..+..-.........-..... .+..++.|. +.....+|+++..+.. .+...
T Consensus 185 ~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~iv~~~~~~~~~~~ 264 (401)
T TIGR01264 185 FSRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLASLSSTVPILSCGGLAKRWLVPGWRLGWIIIHDRRGILRDI 264 (401)
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccccHHHcCCCCcEEEEccCcccCCCccceEEEEEecCcchhHHHH
Confidence 4 5889999999999999999999765431111111111011112 345668997 4555779998876431 11111
Q ss_pred hcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c--
Q 048643 340 LSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS---P-- 414 (506)
Q Consensus 340 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p-- 414 (506)
+.... .+... .++ .+ ......+-..|.....+.+++..++..+..+++.+.|++.+++. |
T Consensus 265 ~~~~~-~~~~~-----------~~~--~~-~~~q~a~~~~l~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~~ 329 (401)
T TIGR01264 265 RDGLV-KLSQR-----------ILG--PC-TIVQGALPSILLRTPQEYFDGTLSVLESNAMLCYGALAAVPGLRPVMPSG 329 (401)
T ss_pred HHHHH-HHhhc-----------cCC--CC-cHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCe
Confidence 11000 00000 000 00 00001111222222245677778888888899999999887765 5
Q ss_pred -ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHH-hcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHH
Q 048643 415 -SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESIN-ASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQ 492 (506)
Q Consensus 415 -~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~ 492 (506)
+.+.+++..... + + .....++.+++. +.|+....+..+...+++|++++. .+++++..++.|.
T Consensus 330 g~f~~~~~~~~~~-------~-~----~~~~~~~~~~l~~~~gI~v~pg~~f~~~~~iRis~~~---~~~~l~~~l~rl~ 394 (401)
T TIGR01264 330 AMYMMVGIEMEHF-------P-E----FKNDVEFTERLVAEQSVFCLPGSCFEYPGFFRVVLTV---PVVMMEEACSRIQ 394 (401)
T ss_pred eeEEEEEeccccc-------C-C----CCCHHHHHHHHHHhCCEEEeCchhcCCCCeEEEEEcC---CHHHHHHHHHHHH
Confidence 344444421000 0 0 001245556654 567754444334345799999964 4678999998888
Q ss_pred HHHHH
Q 048643 493 EQLEA 497 (506)
Q Consensus 493 ~~~~~ 497 (506)
++.++
T Consensus 395 ~~~~~ 399 (401)
T TIGR01264 395 EFCER 399 (401)
T ss_pred HHHhc
Confidence 87654
No 133
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.78 E-value=4.4e-16 Score=160.58 Aligned_cols=313 Identities=15% Similarity=0.148 Sum_probs=195.2
Q ss_pred ccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCch
Q 048643 123 NWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHC 202 (506)
Q Consensus 123 ~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~ 202 (506)
.|....+..++++.+.+|+.+.+|.+... ....++|+|+++++..++.+... ++..|++...+|.
T Consensus 62 ~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~----~~~i~it~G~~~al~~~~~~~~~-----------~gd~vl~~~p~y~ 126 (391)
T PRK07309 62 HYTGMAGLLELRQAAADFVKEKYNLDYAP----ENEILVTIGATEALSASLTAILE-----------PGDKVLLPAPAYP 126 (391)
T ss_pred CCCCCCCcHHHHHHHHHHHHHHhCCCCCC----CCcEEEeCChHHHHHHHHHHhcC-----------CCCEEEEeCCCCc
Confidence 35444557889999999999888874220 02688999999988777665432 5567788888998
Q ss_pred HHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCccc---ChhHHHHHHHHhC
Q 048643 203 ALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVD---PLKPLCDVAKQFG 279 (506)
Q Consensus 203 s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~id---pl~~I~~ia~~~g 279 (506)
.+...++..|. +++.+|++.+ ++.+|++.|++++++.. ..+.+|+++.++|+||.+- ++++|+++|++||
T Consensus 127 ~~~~~~~~~g~---~~~~~~~~~~-~~~~d~~~l~~~~~~~~---~~~~~i~l~~P~NPtG~~~s~~~~~~l~~~~~~~~ 199 (391)
T PRK07309 127 GYEPIVNLVGA---EIVEIDTTEN-DFVLTPEMLEKAILEQG---DKLKAVILNYPANPTGVTYSREQIKALADVLKKYD 199 (391)
T ss_pred chHHHHHHcCC---EEEEEecCCc-CCcCCHHHHHHHhhccC---CCeEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcC
Confidence 89999999999 9999998653 46899999999986531 1244777888999999874 5899999999999
Q ss_pred CEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCC-CcceEEEEeCchhHHhhhcCCccccCCccccCCCcc
Q 048643 280 IWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVV 358 (506)
Q Consensus 280 ~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~ 358 (506)
+++++|++|+......+.......-...--.+..++.|.++.| ..+|+++.. ++.+. .+.....|...
T Consensus 200 ~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRvG~~v~~-~~~~~-~~~~~~~~~~~--------- 268 (391)
T PRK07309 200 IFVISDEVYSELTYTGEPHVSIAEYLPDQTILINGLSKSHAMTGWRIGLIFAP-AEFTA-QLIKSHQYLVT--------- 268 (391)
T ss_pred cEEEEEccccceeeCCCCCCCHHHhccCCEEEEecChhhccCccceeEEEEeC-HHHHH-HHHHHHhhccc---------
Confidence 9999999997654311111111110111124566799998754 457777654 33332 22211112110
Q ss_pred CCCCccccCCCCCCchHHHHHHHHh--chhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c--ceEEE-eecCCCccccc
Q 048643 359 DYKDWQITLSRRFRSLKLWLVIRNY--GVANLRHFLRSHVNMAKLFERLVASDKRVS---P--SAVMD-KLKPKYENCHS 430 (506)
Q Consensus 359 ~~~~~~~~~sr~~~al~~~~~l~~~--G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p--~~v~f-~~~~~~~~~~~ 430 (506)
+ ...+...++.+.+ +........++..+.++++.+.|++. +++ | +.+.+ ++.+..
T Consensus 269 --------~---~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~p~gg~~~~~~l~~~~----- 331 (391)
T PRK07309 269 --------A---ATTMAQFAAVEALTNGKDDALPMKKEYIKRRDYIIEKMTDL-GFKIIKPDGAFYIFAKIPAGY----- 331 (391)
T ss_pred --------C---CChHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHC-CCeecCCCeeEEEEEECCCCC-----
Confidence 0 0111122222222 22223344556667788888889887 566 4 33322 433210
Q ss_pred ccccchHHHHHHHHHHHHHHHH-hcCcEEEeeeeE--CCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 048643 431 QQLVTEEEAINEFNRELLESIN-ASGKAYMTHAVC--GGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAF 498 (506)
Q Consensus 431 ~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~--~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l 498 (506)
.....++.+++. +.|+.+..+..+ .+..+||++++. +.+++++.++.|.++.+++
T Consensus 332 ----------~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~---~~~~l~~~i~~l~~~~~~~ 389 (391)
T PRK07309 332 ----------NQDSFKFLQDFARKKAVAFIPGAAFGPYGEGYVRLSYAA---SMETIKEAMKRLKEYMEEH 389 (391)
T ss_pred ----------CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC---CHHHHHHHHHHHHHHHHhh
Confidence 001234555543 456644333322 235799999963 4679999999998887654
No 134
>PRK12414 putative aminotransferase; Provisional
Probab=99.77 E-value=3e-16 Score=161.41 Aligned_cols=321 Identities=10% Similarity=0.061 Sum_probs=200.1
Q ss_pred HHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcc
Q 048643 107 GFLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGR 186 (506)
Q Consensus 107 ~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~ 186 (506)
..+.+.+...+......|....+..++.+.+.+|+++++|.+.+. ....++|+|+++++..++.+..+
T Consensus 45 ~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~----~~~i~it~g~~~al~~~~~~l~~-------- 112 (384)
T PRK12414 45 PALVEGVARAMRDGHNQYAPMAGIAALREALAEKTERLYGARYDP----ASEVTVIASASEGLYAAISALVH-------- 112 (384)
T ss_pred HHHHHHHHHHHHhCCCCcCCCCCcHHHHHHHHHHHHHHhCCCCCC----CCcEEEECChHHHHHHHHHHhcC--------
Confidence 334444443332223446555667899999999999999985321 01689999999887766655432
Q ss_pred cCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc-
Q 048643 187 ENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV- 265 (506)
Q Consensus 187 ~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i- 265 (506)
++..|+++..+|......++..|. +++.+|++++ ++.+|++.|++++++. +.+|+++.++|+||.+
T Consensus 113 ---~gd~Vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~~-~~~~d~~~l~~~l~~~------~~~v~i~~p~NPTG~~~ 179 (384)
T PRK12414 113 ---PGDEVIYFEPSFDSYAPIVRLQGA---TPVAIKLSPE-DFRVNWDEVAAAITPR------TRMIIVNTPHNPSATVF 179 (384)
T ss_pred ---CCCEEEEeCCCccchHHHHHHcCC---EEEEEecCcc-ccccCHHHHHhhcCcc------cEEEEEcCCCCCCCcCC
Confidence 566788888999998899999999 9999998753 4789999999988643 3477788899999998
Q ss_pred --cChhHHHHHHHHhCCEEEeecccccccccCccchhh--hcCCCCCCeeEEcCccccCCC-CcceEEEEeCchhHHhhh
Q 048643 266 --DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHF--IDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSALVSSL 340 (506)
Q Consensus 266 --dpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~--~~gi~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~ 340 (506)
+++++|+++|++||+|+++|++|.-...-....... +.....--.+..++.|.++.| ..+|+++..+. . .+.+
T Consensus 180 s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRiG~~v~~~~-l-~~~l 257 (384)
T PRK12414 180 SAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTGWRVGYCLAPAE-L-MDEI 257 (384)
T ss_pred CHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecccccccCccceEEEEecCHH-H-HHHH
Confidence 678999999999999999999997543211111111 011111124566789999744 66888876532 2 2222
Q ss_pred cCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhch-hHHHHHHHHHHHHHHHHHHHHHcCCCCc---c--
Q 048643 341 STNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGV-ANLRHFLRSHVNMAKLFERLVASDKRVS---P-- 414 (506)
Q Consensus 341 ~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~-~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p-- 414 (506)
.....+.. .....+..+++.+.+.. ..+.+..+...+.++++.+.|++. +++ |
T Consensus 258 ~~~~~~~~--------------------~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~~~~g 316 (384)
T PRK12414 258 RKVHQFMV--------------------FSADTPMQHAFAEALAEPASYLGLGAFYQRKRDLLARELAGS-RFELLPSEG 316 (384)
T ss_pred HHHHhhee--------------------cCCCcHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhC-CCeecCCCc
Confidence 11100000 00112222333333322 234455666778888899999887 566 3
Q ss_pred ceEEE-eecCCCcccccccccchHHHHHHHHHHHH-HHHHhcCcEEEeeeeEC--C--EEEEEEEecCCCCCHHHHHHHH
Q 048643 415 SAVMD-KLKPKYENCHSQQLVTEEEAINEFNRELL-ESINASGKAYMTHAVCG--G--IYAMRFAVGATLTEERHVMVAW 488 (506)
Q Consensus 415 ~~v~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~l~~~g~~~~~~~~~~--g--~~~lR~~~~~~~tt~edi~~li 488 (506)
+.+.| ++.+.. .....++. +.+.+.|+.++.+..+. + ..++|++++. +++++++.+
T Consensus 317 g~~~~~~~~~~~---------------~~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRis~~~---~~~~~~~~~ 378 (384)
T PRK12414 317 SFFMLARFRHFS---------------DESDSDFVLRLIRDARVATIPLSAFYTDGTDTGLIRLSFSK---DDATLVEGA 378 (384)
T ss_pred ceEEEEcccccC---------------CCCHHHHHHHHHHhCCEEEecchhhcCCCCCCCEEEEEecC---CHHHHHHHH
Confidence 44444 443210 00012333 44556687555443331 2 4689999964 477888888
Q ss_pred HHHHH
Q 048643 489 TMVQE 493 (506)
Q Consensus 489 ~~l~~ 493 (506)
+.|.+
T Consensus 379 ~rl~~ 383 (384)
T PRK12414 379 RRLCS 383 (384)
T ss_pred HHHhh
Confidence 77754
No 135
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.77 E-value=3.5e-16 Score=163.29 Aligned_cols=329 Identities=14% Similarity=0.076 Sum_probs=192.5
Q ss_pred HHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCC
Q 048643 110 GEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENI 189 (506)
Q Consensus 110 ~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~ 189 (506)
.+...+++......|..++...++|+.+.+++ |.+ .+++|.||++|+..++.+..+
T Consensus 60 ~~a~~~a~~~g~~~Y~~~~g~~~Lreaia~~~----~~~---------~vv~t~ggt~A~~~~~~all~----------- 115 (460)
T PRK13238 60 SDRQWAAMMRGDEAYAGSRSYYRLEDAVKDIF----GYP---------YTIPTHQGRAAEQILFPVLIK----------- 115 (460)
T ss_pred hHHHHHHHHhCCcccCCCCCHHHHHHHHHHHh----CCC---------cEEECCCHHHHHHHHHHHhCC-----------
Confidence 33333333333456888888899988766555 432 479999999999888766533
Q ss_pred CCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCC------CC--cccCHHHHHHHHHHHHhcCCccEEEEEeccCCC
Q 048643 190 SKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKS------SS--YGLSPDSLLTQINLDVEAGLVPLFLCATIGTTA 261 (506)
Q Consensus 190 ~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~------~~--~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~ 261 (506)
++. |+++...+.+....+.+.|. +++.+|+++. ++ |.+|++.|+++|.+... .++.+|+++.++|+
T Consensus 116 pGD-Vii~~p~~~~~~~~i~~~G~---~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~i~~~~~--~~tk~Ivl~~p~Np 189 (460)
T PRK13238 116 KGD-VVPSNYHFDTTRAHIELNGA---TAVDLVIDEALDTGSRHPFKGNFDLEKLEALIEEVGA--ENVPFIVMTITNNS 189 (460)
T ss_pred CCC-EEccCCcccchHHHHHHcCC---EEEEEeccccccccccccccCCcCHHHHHHHHhhcCC--CceeEEEEecCCCC
Confidence 445 66665533455556778899 9999998641 12 34999999999975311 23558999999999
Q ss_pred CC-cc---cChhHHHHHHHHhCCEEEeeccccc-ccccCc----cchhh-hc-----CCCCCCeeEEcCccccCCCCcce
Q 048643 262 IT-AV---DPLKPLCDVAKQFGIWVHVDAAYAG-SACICP----EFQHF-ID-----GVEGADSFSLNAHKWFFTTLDCC 326 (506)
Q Consensus 262 tG-~i---dpl~~I~~ia~~~g~~lhVDaA~gg-~~~~~~----~~~~~-~~-----gi~~aDsi~~~~hK~l~~p~~~g 326 (506)
+| .+ +++++|+++|++||+|+++|+|+.. .+.+.. .+... +. -...+|++++++||.+++|.| |
T Consensus 190 tGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i~~~~~s~~D~~~~Sg~K~g~~~~G-G 268 (460)
T PRK13238 190 AGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEIAREMFSYADGLTMSAKKDAMVNIG-G 268 (460)
T ss_pred CCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHHhhhhcccCcEEEEecccCCCCcce-e
Confidence 98 44 5678999999999999999998743 222221 11111 00 014699999999999999985 8
Q ss_pred EEEEeCchhHHhhhcCCccccCCccccCCCccCCCCccccCCCCCC-chHHHHHHHH-hchhHHHHHHHHHHHHHHHHHH
Q 048643 327 CLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFR-SLKLWLVIRN-YGVANLRHFLRSHVNMAKLFER 404 (506)
Q Consensus 327 ~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~-al~~~~~l~~-~G~~g~~~~i~~~~~~a~~l~~ 404 (506)
++++++.+...+ +.... ..... +...++-..+ ..++-.+|+. ...+. ++...+.+++|.+
T Consensus 269 ~i~~~d~~l~~~-~~~~~-~~~~g------------~~t~~g~~~~~~~Ala~~l~e~~~~~~----~~~~~~~~~~l~~ 330 (460)
T PRK13238 269 LLCFRDEDLFTE-CRTLC-ILYEG------------FPTYGGLAGRDMEALAVGLYEGMDEDY----LAYRIGQVEYLGE 330 (460)
T ss_pred EEEcChHHHHHH-hhhcc-cccCC------------cccccCcHHHHHHHHHhhHHHhhChHH----HHHHHHHHHHHHH
Confidence 888887544332 21110 00000 0001111111 1122222322 12223 3334445789999
Q ss_pred HHHcCCCCc---c--ceEEE-eecCCCcccccccccchHHHHHHHHHHHHHHHH-hcCcEEEeeeeE-------CC----
Q 048643 405 LVASDKRVS---P--SAVMD-KLKPKYENCHSQQLVTEEEAINEFNRELLESIN-ASGKAYMTHAVC-------GG---- 466 (506)
Q Consensus 405 ~l~~~~~~~---p--~~v~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~-------~g---- 466 (506)
.|++. |+. | +..+| .+..-. ... ..+... ..++...|. +.|+..+....+ .|
T Consensus 331 ~L~~~-G~~~~~p~Gg~~v~~d~~~~~-~~~------~~~~~~--~~~~a~~L~~e~GV~~~~~~~f~~~~~~~~~~~~~ 400 (460)
T PRK13238 331 GLEEA-GVPIQTPAGGHAVFVDAGKFL-PHI------PAEQFP--AQALACELYLEAGIRGVEIGSLLLGRDPKTGEQLP 400 (460)
T ss_pred HHHHC-CCCeEccCCceEEEEEchhcC-CCC------CCCCCc--hHHHHHHHHHHcCeeeecccceecccCCCCccccC
Confidence 99886 777 5 32222 221100 000 000000 133444444 345544443311 12
Q ss_pred --EEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 048643 467 --IYAMRFAVGATLTEERHVMVAWTMVQEQLEA 497 (506)
Q Consensus 467 --~~~lR~~~~~~~tt~edi~~li~~l~~~~~~ 497 (506)
...+|+++.-.--|.++++.+.+.|+++.++
T Consensus 401 ~~~~~~Rla~~rr~~~~~~~~~~~~~l~~~~~~ 433 (460)
T PRK13238 401 APAELLRLAIPRRVYTQSHMDYVAEALKAVKEN 433 (460)
T ss_pred CccceEEEecccccCCHHHHHHHHHHHHHHHHh
Confidence 4789999953334677999999999988643
No 136
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.77 E-value=2.1e-16 Score=157.61 Aligned_cols=325 Identities=16% Similarity=0.115 Sum_probs=217.4
Q ss_pred HHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCC
Q 048643 110 GEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENI 189 (506)
Q Consensus 110 ~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~ 189 (506)
.+.+...+..... ..+|...++|+ ++++.+|.+. .+.+++||.|+..||.+.--.
T Consensus 18 ~~~v~~vl~sg~i--~~G~~v~~FE~----~~ae~~G~k~---------ava~~sgT~AL~laL~al~ig---------- 72 (374)
T COG0399 18 LAAVQEVLKSGWL--TGGPFVRRFEQ----AFAEYLGVKY---------AVAVSSGTAALHLALLALAIG---------- 72 (374)
T ss_pred HHHHHHHHHcCCe--ecChHHHHHHH----HHHHHhCCCe---------EEEecChHHHHHHHHHhcCCC----------
Confidence 3344444443322 34788888986 4778888764 588889999999988754311
Q ss_pred CCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChh
Q 048643 190 SKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLK 269 (506)
Q Consensus 190 ~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~ 269 (506)
+++.|+++..+..+...++-+.|. +.+.|++|++ ++.||++.||++|.+.++ .|+.++ ..|..-|++
T Consensus 73 ~GDeVI~ps~TfvATan~i~~~Ga---~PVFvDid~~-T~nid~~~ie~aIt~~tK------AIipVh---l~G~~~dm~ 139 (374)
T COG0399 73 PGDEVIVPSFTFVATANAVLLVGA---KPVFVDIDPD-TLNIDPDLIEAAITPRTK------AIIPVH---LAGQPCDMD 139 (374)
T ss_pred CCCEEEecCCchHHHHHHHHHcCC---eEEEEecCCc-ccCCCHHHHHHHcccCCe------EEEEeh---hccCCCCHH
Confidence 677899999999999999999999 9999999975 689999999999998755 555554 468888999
Q ss_pred HHHHHHHHhCCEEEeecccccccccCccchhhhc-CCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccC
Q 048643 270 PLCDVAKQFGIWVHVDAAYAGSACICPEFQHFID-GVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLK 348 (506)
Q Consensus 270 ~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~-gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~ 348 (506)
+|.+||++||++++.|+|++-+.. |+..-. .+..+-++++-+.|.+.+. ..|++.++|++...+.......-..
T Consensus 140 ~i~~la~~~~l~vIEDaAqa~Ga~----y~gk~vGt~Gd~~~fSF~~~K~ittg-EGGav~tnd~ela~k~~~lr~hG~~ 214 (374)
T COG0399 140 AIMALAKRHGLPVIEDAAQAHGAT----YKGKKVGSFGDIGAFSFHATKNLTTG-EGGAVVTNDEELAEKARSLRNHGLS 214 (374)
T ss_pred HHHHHHHHcCCeEEEEcchhccCe----ecCcccccccceEEEEecCCCCcccc-CceEEEeCCHHHHHHHHHHHHhCcC
Confidence 999999999999999999977654 332222 2456778888999999876 7888888887654332211100000
Q ss_pred CccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc-c-----ceEEEeec
Q 048643 349 NKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS-P-----SAVMDKLK 422 (506)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~-p-----~~v~f~~~ 422 (506)
. .. .+.-+....+-+.+--.+-+++.....+.++++.++..+++++..+.|++.+++. | ....+...
T Consensus 215 ~-----~~--~~~y~~~~~G~N~rm~~iqAAigl~QL~~l~~~~~~R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~~~~~~ 287 (374)
T COG0399 215 R-----DA--VFKYLHEELGYNYRLTEIQAAIGLAQLERLDEINERRREIAQIYAEALKGLPGITLPPEPDGAVHAWHLY 287 (374)
T ss_pred C-----Cc--cccceeeecccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCceeeeeee
Confidence 0 00 0111122333344444555666666678899999999999999999999988766 2 21112111
Q ss_pred CCCcccccccccchHHHHHHHHHHHHHHHHhcCcE---EEeeeeE--------------------CCEEEEEEEecCCCC
Q 048643 423 PKYENCHSQQLVTEEEAINEFNRELLESINASGKA---YMTHAVC--------------------GGIYAMRFAVGATLT 479 (506)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~---~~~~~~~--------------------~g~~~lR~~~~~~~t 479 (506)
.... ..+ ......+.+.|.+.|+. +..|... .....+.+= ++|..
T Consensus 288 ~i~~---------~~~--~~~R~~l~~~L~~~gi~~~~~~~P~~~~~~~~~~~~~~~~~lp~ae~~~~r~l~LP-~~p~l 355 (374)
T COG0399 288 TILV---------DEE--GISRDALMESLKEAGVGAVVYFRPLHLQPAYRQLGYFPEGDLPNAEDLSERILSLP-LHPNL 355 (374)
T ss_pred EEEe---------cCC--CCCHHHHHHHHHhCCCCceEEeeccccchhhhcccccccCCCchHHHHhhCeEEcc-CCCCC
Confidence 1000 000 11124566667666553 2222100 013456664 47899
Q ss_pred CHHHHHHHHHHHHHHHH
Q 048643 480 EERHVMVAWTMVQEQLE 496 (506)
Q Consensus 480 t~edi~~li~~l~~~~~ 496 (506)
+++|++++++.|+++..
T Consensus 356 ~~~~~~~V~~~l~~~~~ 372 (374)
T COG0399 356 SEEDVDRVIEALKEVLG 372 (374)
T ss_pred CHHHHHHHHHHHHHHhc
Confidence 99999999999998764
No 137
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.77 E-value=5.9e-16 Score=160.04 Aligned_cols=326 Identities=15% Similarity=0.145 Sum_probs=198.2
Q ss_pred HHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcc
Q 048643 107 GFLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGR 186 (506)
Q Consensus 107 ~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~ 186 (506)
..+.+.+....+ ....|....+..++.+.+.+++.. .|.+.+ ....++|+|+++++..++.+...
T Consensus 46 ~~~~~a~~~~~~-~~~~Y~~~~g~~~lr~~ia~~~~~-~~~~~~-----~~~i~~t~G~~~al~~~~~~l~~-------- 110 (397)
T PRK07568 46 EVFFEAIKNYDE-EVLAYSHSQGIPELREAFAKYYKK-WGIDVE-----PDEILITNGGSEAILFAMMAICD-------- 110 (397)
T ss_pred HHHHHHHHHHhc-CCcCcCCCCCCHHHHHHHHHHHHH-hCCCCC-----cceEEEcCChHHHHHHHHHHhcC--------
Confidence 334444444332 223455445677888888888763 454322 12688999999988776654422
Q ss_pred cCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCccc-CHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc
Q 048643 187 ENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGL-SPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV 265 (506)
Q Consensus 187 ~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~-d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i 265 (506)
++..|+++...+..+...++..|+ +++.|+++.++++.+ +++.|++++++.+ .+|+++.++|+||.+
T Consensus 111 ---~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~~g~~~~~~~~l~~~~~~~~------~~v~i~~p~NPtG~~ 178 (397)
T PRK07568 111 ---PGDEILVPEPFYANYNGFATSAGV---KIVPVTTKIEEGFHLPSKEEIEKLITPKT------KAILISNPGNPTGVV 178 (397)
T ss_pred ---CCCEEEEecCCCccHHHHHHHcCC---EEEEeecCcccCCCCCCHHHHHHhcCccc------eEEEEECCCCCCCcc
Confidence 455677777777777777888899 999999864333343 6899998886543 367888899999998
Q ss_pred c---ChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCC-CC--eeEEcCccccCC-CCcceEEEEeCchhHHh
Q 048643 266 D---PLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEG-AD--SFSLNAHKWFFT-TLDCCCLWVKDPSALVS 338 (506)
Q Consensus 266 d---pl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~-aD--si~~~~hK~l~~-p~~~g~~~~r~~~~l~~ 338 (506)
- ++++|+++|+++|+++++|.+|+.+..-.+...... .+.. .+ .+..+++|.++. ...+|++++.++.....
T Consensus 179 ~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~-~~~~~~~~~i~~~S~SK~~~~~G~R~G~~~~~~~~~~~~ 257 (397)
T PRK07568 179 YTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSAL-SLEGLEDRVIIIDSVSKRYSACGARIGCLISKNKELIAA 257 (397)
T ss_pred CCHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChh-hcCCCcCCEEEEecchhhccCCCcceEEEecCCHHHHHH
Confidence 6 488999999999999999999986532111111111 1111 12 345578999874 56789888765544332
Q ss_pred hhcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHh--chhHHHHHHHHHHHHHHHHHHHHHcCCCCc---
Q 048643 339 SLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNY--GVANLRHFLRSHVNMAKLFERLVASDKRVS--- 413 (506)
Q Consensus 339 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~--- 413 (506)
........+ + ...+...++...+ +.+.++++.+...+.++.+.+.|++.+++.
T Consensus 258 ~~~~~~~~~-------------------~---~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 315 (397)
T PRK07568 258 AMKLCQARL-------------------S---PPTLEQIGAAALLDTPESYFDEVREEYKKRRDILYEELNKIPGVVCEK 315 (397)
T ss_pred HHHHhhccC-------------------C---CCcHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCceecC
Confidence 111100000 0 0111112222222 345677777888888999999998887765
Q ss_pred c--ce-EEEeecCCCcccccccccchHHHHHHHHHHHHHHH--HhcCcEEEeeeeE---C--CEEEEEEEecCCCCCHHH
Q 048643 414 P--SA-VMDKLKPKYENCHSQQLVTEEEAINEFNRELLESI--NASGKAYMTHAVC---G--GIYAMRFAVGATLTEERH 483 (506)
Q Consensus 414 p--~~-v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l--~~~g~~~~~~~~~---~--g~~~lR~~~~~~~tt~ed 483 (506)
| +. +.+++... + ..++.+.+.+.. .+.|+.+..+..+ . +..++|++++. ++++
T Consensus 316 p~g~~~~~~~l~~~-----------~---~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~~~iRls~~~---~~~~ 378 (397)
T PRK07568 316 PKGAFYIIAKLPVD-----------D---AEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGKNEIRIAYVL---NEED 378 (397)
T ss_pred CCcceEEEEecCCC-----------C---HHHHHHHHHhhcccccceEEEeCchHhcCCCCCCCCeEEEEEeC---CHHH
Confidence 5 33 34454321 0 022223332221 1145544433322 1 24689999853 4679
Q ss_pred HHHHHHHHHHHHHHHH
Q 048643 484 VMVAWTMVQEQLEAFL 499 (506)
Q Consensus 484 i~~li~~l~~~~~~l~ 499 (506)
+++.++.|.++.++..
T Consensus 379 ~~~~~~~l~~~l~~~~ 394 (397)
T PRK07568 379 LKRAMEILKEALEKYN 394 (397)
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999998877654
No 138
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.77 E-value=2.8e-16 Score=159.64 Aligned_cols=305 Identities=12% Similarity=0.035 Sum_probs=193.0
Q ss_pred cccccChhhHHHHHHHHHHHHHHcCCCCccccCCCC-cEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCC
Q 048643 122 FNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNG-GGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQT 200 (506)
Q Consensus 122 ~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~-~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~ 200 (506)
..|....+...+++.+.+|+.+..|.+.+. . ..++|+|+++++..++.+..+. |.++..|+++..+
T Consensus 30 ~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~-----~~~Iiit~Gs~~ai~~~~~~~~~~--------g~~~d~Vl~~~p~ 96 (350)
T TIGR03537 30 SQYPSALGTKALREAISGWFERRFGVKLDP-----DAQVLPSAGSKEAIFHFPLVFIDP--------EEDRRRVIFGTPG 96 (350)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCCCC-----CCcEEEcCChHHHHHHHHHHHcCC--------CCCCceEEEcCCC
Confidence 345544556899999999999988865432 2 6889999988886655543221 1123578888999
Q ss_pred chHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC---hhHHHHHHHH
Q 048643 201 HCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP---LKPLCDVAKQ 277 (506)
Q Consensus 201 H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp---l~~I~~ia~~ 277 (506)
+.....+++.+|. +++.+|+++++++.+|+++|++++.+.+ .+|+++.++|+||.+-| +++|+++|++
T Consensus 97 y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~~~~~~------~~i~i~~p~NPtG~~~~~~~~~~l~~~a~~ 167 (350)
T TIGR03537 97 YPVYERGALFAGG---EPTAVKLKKEDGFLLRLEKVEKSILEET------KIVWINYPHNPTGATAPRSYLKETIAMCRE 167 (350)
T ss_pred CcchHHHHHhcCC---EEEEcccCcccCCccCHHHHHHhhhhcc------EEEEEeCCCCCcCcccCHHHHHHHHHHHHH
Confidence 9999999999999 9999999754457899999999987643 36778889999999877 8999999999
Q ss_pred hCCEEEeecccccccccCccchhhhcCCCCC-CeeEEcCccccCCC-CcceEEEEeCchhHHhhhcCCccccCCccccCC
Q 048643 278 FGIWVHVDAAYAGSACICPEFQHFIDGVEGA-DSFSLNAHKWFFTT-LDCCCLWVKDPSALVSSLSTNPEYLKNKATESK 355 (506)
Q Consensus 278 ~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~a-Dsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~ 355 (506)
||+++++|.+|+....- ....... ....- ..+..+++|.++.| ...|+++. ++... ..+.....+..
T Consensus 168 ~~~~ii~De~y~~~~~~-~~~~~~~-~~~~~~~i~~~s~SK~~g~~GlRiG~~~~-~~~~~-~~~~~~~~~~~------- 236 (350)
T TIGR03537 168 HGIILCSDECYTEIYFG-EPPHSAL-EVGIENVLAFHSLSKRSGMTGYRSGFVAG-DEKLI-SFLRKLRANFG------- 236 (350)
T ss_pred cCcEEEEeccccccccC-CCCCchh-hcCcCCEEEEeecccccCCccccceeeec-CHHHH-HHHHHHHHhhc-------
Confidence 99999999999754321 1111111 11111 13444789998654 45676653 33322 22221101110
Q ss_pred CccCCCCccccCCCCCCchHHHHHHHHh-chhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c--ce-EEEeecCCCccc
Q 048643 356 QVVDYKDWQITLSRRFRSLKLWLVIRNY-GVANLRHFLRSHVNMAKLFERLVASDKRVS---P--SA-VMDKLKPKYENC 428 (506)
Q Consensus 356 ~~~~~~~~~~~~sr~~~al~~~~~l~~~-G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p--~~-v~f~~~~~~~~~ 428 (506)
.+. ..+...++...+ ..+.+++..++..++.+.+.+.|++. +++ | +. +.+++.+.
T Consensus 237 -----------~~~--~~~~q~~~~~~l~~~~~~~~~r~~l~~~~~~~~~~l~~~-g~~~~~~~g~~~~~~~~~~~---- 298 (350)
T TIGR03537 237 -----------VAS--PDFVQAAAKAAWSDDNHVLERRKIFKRKRDLFIEFFNKV-GLEYLYPDATFYLWVKVPSG---- 298 (350)
T ss_pred -----------cCC--CHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHC-CCcccCCCeEEEEEEECCCC----
Confidence 000 001111111222 13345666677777888888888886 666 4 33 33343221
Q ss_pred ccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeE--CCEEEEEEEecCCCCCHHHHHHHHHHHHH
Q 048643 429 HSQQLVTEEEAINEFNRELLESINASGKAYMTHAVC--GGIYAMRFAVGATLTEERHVMVAWTMVQE 493 (506)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~--~g~~~lR~~~~~~~tt~edi~~li~~l~~ 493 (506)
....++.+.|.++|+....+..+ .+..++|+++. .++++++++++.|++
T Consensus 299 -------------~~~~~l~~~L~~~gv~v~~g~~f~~~~~~~~Ri~~~---~~~~~~~~~l~~~~~ 349 (350)
T TIGR03537 299 -------------IDAKDYALRLLENGIVVAPGENFGSGEEGYVRVALV---PTLEECEEALRLWER 349 (350)
T ss_pred -------------CCHHHHHHHHHHCCEEEcCchhhCCCCCCEEEEEec---CCHHHHHHHHHHHhc
Confidence 01246777777778654433333 22578999984 367788888877764
No 139
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.77 E-value=1.1e-16 Score=171.11 Aligned_cols=366 Identities=11% Similarity=0.106 Sum_probs=223.4
Q ss_pred HHHHHHHHhcCCCCCCCCCCccccC-----CCCCCHHHHHHHHH--HhhcC-CCCcccccChhhHHHHHHHHHHHHHHcC
Q 048643 75 ILQDVQEHIVPGVTHWQSPNYFAYF-----PSSGSIAGFLGEML--SSGFN-VVGFNWISSPAATELENIVMDWLGQMLK 146 (506)
Q Consensus 75 il~~~~~~~~~~~~~~~~p~~~~~~-----~~~~~~~~~~~~~l--~~~~n-~~~~~~~~~p~~~~lE~~~~~~la~l~g 146 (506)
+++.|.+....+...|+-|.+.|-. |.+.......++-+ ....+ ......-..|.....|.+ +..|+.||
T Consensus 132 ~~~aL~~y~~~~~~sfh~PGHkgG~~f~k~p~G~~f~~f~Gen~~r~Dlt~ev~~LddLl~~~G~i~eAe--~~AA~~fg 209 (714)
T PRK15400 132 LTKALFKYVREGKYTFCTPGHMGGTAFQKSPVGSLFYDFFGPNTMKSDISISVSELGSLLDHSGPHKEAE--EYIARVFN 209 (714)
T ss_pred HHHHHHHHHhCCCceeeCCCCCCCCCCCCCchhHHHHHHhhhhhhhhhccccccCCCCCCCCChHHHHHH--HHHHHHhC
Confidence 4555666666777888888777522 11112223333311 11111 112222233434445544 88999999
Q ss_pred CCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCC
Q 048643 147 LPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKS 226 (506)
Q Consensus 147 ~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~ 226 (506)
.+.++ ++++|+|.+|..++.++.. ++..|+++..+|-|+..++.+.|+ ..++++...+
T Consensus 210 Ad~ty--------fvvNGTS~~n~av~~a~~~-----------~Gd~VLvdRN~HKSv~haLilsga---~PVYl~P~rn 267 (714)
T PRK15400 210 ADRSY--------MVTNGTSTANKIVGMYSAP-----------AGSTVLIDRNCHKSLTHLMMMSDV---TPIYFRPTRN 267 (714)
T ss_pred CCcEE--------EEeCchHHHHHHHHHHhcC-----------CCCEEEeecccHHHHHHHHHHcCC---eEEEeccccc
Confidence 99875 8899999999888777654 677899999999999999999999 8898876542
Q ss_pred CC---cccC-----HHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecccccccccCccc
Q 048643 227 SS---YGLS-----PDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEF 298 (506)
Q Consensus 227 ~~---~~~d-----~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~ 298 (506)
.- +.++ .+.++++|++... -.+|+.+++|.+ |..|.+-++++|+++|+.++ +|||.|||+.+.+.|.+
T Consensus 268 ~~Gi~g~I~~~~~~~e~i~~~i~~~p~-ak~p~~~vit~p-TYdG~~yd~~~I~~~~~~~~--ilvDEAwgah~~F~p~~ 343 (714)
T PRK15400 268 AYGILGGIPQSEFQHATIAKRVKETPN-ATWPVHAVITNS-TYDGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSPIY 343 (714)
T ss_pred ccCCccCCCccccCHHHHHHHHHhCcc-ccCccEEEEECC-CCccEecCHHHHHHHhCCCC--EEEEccchhhhccCccc
Confidence 21 2345 8999999987643 346778888887 68899999999999999887 79999999998888766
Q ss_pred hhhhcCCCCC---C--eeEEcCccccCCCCcceEEEEeCc---hhHHhhh----cCCccccCCccccCCCccCCCCcccc
Q 048643 299 QHFIDGVEGA---D--SFSLNAHKWFFTTLDCCCLWVKDP---SALVSSL----STNPEYLKNKATESKQVVDYKDWQIT 366 (506)
Q Consensus 299 ~~~~~gi~~a---D--si~~~~hK~l~~p~~~g~~~~r~~---~~l~~~~----~~~~~yl~~~~~~~~~~~~~~~~~~~ 366 (506)
+....--.++ | .++-+.||.|.+--.++++.++.. +.+.+++ +.+|.|+--
T Consensus 344 ~~~sam~~ga~~~~~i~vtQStHKtL~alTQaS~LHvkg~vd~~~~n~a~~m~~STSPsY~l~----------------- 406 (714)
T PRK15400 344 EGKCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDVNEETFNEAYMMHTTTSPHYGIV----------------- 406 (714)
T ss_pred CCcChhhcCCCCCCceEEEEchhhcccchhHHhHHHHcCCCCHHHHHHHHHHHcCCCcHHHHH-----------------
Confidence 4221101345 5 899999999998777887777542 1122222 111122110
Q ss_pred CCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCC------Cc---cc----eEEEeecCC---------
Q 048643 367 LSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKR------VS---PS----AVMDKLKPK--------- 424 (506)
Q Consensus 367 ~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~------~~---p~----~v~f~~~~~--------- 424 (506)
. .+=.+.+.+..+.-++++++.++.+..|++.|.++++ |+ |. .-||.+.|.
T Consensus 407 -----A--SLD~a~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~w~~~~~~~~~~~~~~~w~~~p~~~whgf~~~ 479 (714)
T PRK15400 407 -----A--STETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNI 479 (714)
T ss_pred -----H--HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhCCCcccCceEEecChhhcccchhcccCccccccCcccc
Confidence 0 1112222232222356778888889999999988766 44 21 123332221
Q ss_pred ----------Ccccccccccch--HHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHH
Q 048643 425 ----------YENCHSQQLVTE--EEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQ 492 (506)
Q Consensus 425 ----------~~~~~~~~~~~~--~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~ 492 (506)
+.....++-+.+ .++..--...+.+.|.+.|+ .+.-+ +...+=+.+ ++..|++++++|+++|.
T Consensus 480 ~~~~~~lDP~Klti~tpgi~~~g~~~~~Gipg~~v~~~L~e~gI-~~E~~---d~~~iLfl~-s~g~t~~~~~~L~~aL~ 554 (714)
T PRK15400 480 DNEHMYLDPIKVTLLTPGMKKDGTMSDFGIPASIVAKYLDEHGI-VVEKT---GPYNLLFLF-SIGIDKTKALSLLRALT 554 (714)
T ss_pred cccccccCCceEEEEeCCCCCCccccccCCCHHHHHHHHHHcCC-EEEec---CCCeEEEEe-CCCCCHHHHHHHHHHHH
Confidence 000000000000 00011112345556666676 33332 233444444 57889999999999999
Q ss_pred HHHHH
Q 048643 493 EQLEA 497 (506)
Q Consensus 493 ~~~~~ 497 (506)
++.+.
T Consensus 555 ~f~~~ 559 (714)
T PRK15400 555 DFKRA 559 (714)
T ss_pred HHHHh
Confidence 88543
No 140
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.77 E-value=2.1e-16 Score=163.61 Aligned_cols=332 Identities=11% Similarity=0.054 Sum_probs=203.1
Q ss_pred HHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccC
Q 048643 109 LGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGREN 188 (506)
Q Consensus 109 ~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~ 188 (506)
+.+.+...+......|....+..++.+.+.+|+++.+|.+... ...++|+|+++|+..++.+...
T Consensus 51 ~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~-----~~i~~t~G~~~al~~~~~~~~~---------- 115 (402)
T PRK06107 51 IKQAAVAAIERGETKYTLVNGTPALRKAIIAKLERRNGLHYAD-----NEITVGGGAKQAIFLALMATLE---------- 115 (402)
T ss_pred HHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCh-----hhEEEeCCHHHHHHHHHHHhcC----------
Confidence 4555555554333445554567789999999999998885331 3789999999888777654322
Q ss_pred CCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCccc--
Q 048643 189 ISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVD-- 266 (506)
Q Consensus 189 ~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~id-- 266 (506)
++..|+++...+.....++...|. .++.++++.++++.+|+++|++++.+. +.+|+++.++|+||.+-
T Consensus 116 -~gd~vl~~~p~y~~y~~~~~~~~~---~~~~v~~~~~~~~~~~~~~l~~~~~~~------~~~v~l~~p~NPtG~~~s~ 185 (402)
T PRK06107 116 -AGDEVIIPAPYWVSYPDMVLANDG---TPVIVACPEEQGFKLTPEALEAAITPR------TRWLILNAPSNPTGAVYSR 185 (402)
T ss_pred -CCCEEEEecCCCcCHHHHHHHcCC---EEEEecCCcccCCCCCHHHHHhhcCcC------ceEEEEECCCCCCCcCcCH
Confidence 566788888877777777777777 778888864445789999999988543 34677888999999885
Q ss_pred -ChhHHHHHHHHh-CCEEEeecccccccccC---ccchhhhcCCCCCCee-EEcCccccCC-CCcceEEEEeCchhHHhh
Q 048643 267 -PLKPLCDVAKQF-GIWVHVDAAYAGSACIC---PEFQHFIDGVEGADSF-SLNAHKWFFT-TLDCCCLWVKDPSALVSS 339 (506)
Q Consensus 267 -pl~~I~~ia~~~-g~~lhVDaA~gg~~~~~---~~~~~~~~gi~~aDsi-~~~~hK~l~~-p~~~g~~~~r~~~~l~~~ 339 (506)
.+++|+++|++| ++++++|.+|+....-. +.......+.. ...+ ..+++|.++. ...+|+++.. +.. .+.
T Consensus 186 ~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~-~~vi~~~S~SK~~~~pGlRiG~~~~~-~~~-~~~ 262 (402)
T PRK06107 186 AELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELR-DRVLVTNGVSKTYAMTGWRIGYAAGP-ADL-IAA 262 (402)
T ss_pred HHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCcc-CCEEEEeccchhhcCcccceeeeecC-HHH-HHH
Confidence 467888889998 99999999997542211 11111111111 2234 4456999974 4567887654 322 223
Q ss_pred hcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHh--chhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c
Q 048643 340 LSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNY--GVANLRHFLRSHVNMAKLFERLVASDKRVS---P 414 (506)
Q Consensus 340 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p 414 (506)
+.....+.. .....+...++.+.+ +...+++..+...+..+.+.+.|++.++++ |
T Consensus 263 ~~~~~~~~~--------------------~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~p 322 (402)
T PRK06107 263 INKLQSQSS--------------------SCPSSISQAAAAAALNGDQSFVTESVAVYKQRRDYALALLNAIPGLSCLVP 322 (402)
T ss_pred HHHHHHhcc--------------------cCCChHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCC
Confidence 321111110 001122223333333 344566777778888888999998876766 4
Q ss_pred --ceEEE-eecCCCcccccccccchHHHH-HHHHHHHHHHH-HhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHH
Q 048643 415 --SAVMD-KLKPKYENCHSQQLVTEEEAI-NEFNRELLESI-NASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWT 489 (506)
Q Consensus 415 --~~v~f-~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l-~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~ 489 (506)
+.+.| ++.... .. . ..+.. ......+.+.+ .+.|+....+..+....++|+++.. +++++++.++
T Consensus 323 ~gg~~~~~~~~~~~-~~---~---~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~Fg~~~~iRis~~~---~~e~l~~~l~ 392 (402)
T PRK06107 323 DGAFYLYVNCAGLI-GK---T---TPEGKVLETDQDVVLYLLDSAGVAVVQGTAYGLSPYFRLSIAT---SLETLEEACA 392 (402)
T ss_pred CcceEEeeeccccc-cc---c---cccccCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeCC---CHHHHHHHHH
Confidence 33333 331100 00 0 00000 00123444444 4567755554444335799999974 5779999999
Q ss_pred HHHHHHHHH
Q 048643 490 MVQEQLEAF 498 (506)
Q Consensus 490 ~l~~~~~~l 498 (506)
.|.++.+++
T Consensus 393 ~l~~~l~~~ 401 (402)
T PRK06107 393 RIERAVAAL 401 (402)
T ss_pred HHHHHHHhc
Confidence 998877654
No 141
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.77 E-value=1.8e-16 Score=163.08 Aligned_cols=219 Identities=15% Similarity=0.186 Sum_probs=153.1
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHH
Q 048643 126 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQ 205 (506)
Q Consensus 126 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 205 (506)
..|...++|+ .+++++|.+.. .++++|+.|+..++.+... ++..|+++...|.+..
T Consensus 63 ~~p~~~~Le~----~lA~l~G~~~~---------~~~~sG~~Ai~~~l~~~l~-----------~Gd~Vl~~~~~y~~~~ 118 (398)
T PRK07504 63 SNPTVDMFEK----RMCALEGAEDA---------RATASGMAAVTAAILCQVK-----------AGDHVVAARALFGSCR 118 (398)
T ss_pred CCchHHHHHH----HHHHHhCCCee---------eEecCHHHHHHHHHHHHhC-----------CCCEEEEcCCchhHHH
Confidence 4566666664 57788888643 5577888888766654322 5567778877776543
Q ss_pred H----HHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCE
Q 048643 206 K----AAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIW 281 (506)
Q Consensus 206 k----a~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~ 281 (506)
. .+...|+ +++.++ .+|+++++++|++.+ .+|+++.++|++|.+-|+++|+++|+++|++
T Consensus 119 ~~~~~~~~~~G~---~v~~vd-------~~d~e~l~~ai~~~t------klV~lesp~NptG~v~dl~~I~~la~~~gi~ 182 (398)
T PRK07504 119 YVVETLLPRYGI---ESTLVD-------GLDLDNWEKAVRPNT------KVFFLESPTNPTLEVIDIAAVAKIANQAGAK 182 (398)
T ss_pred HHHHHHHhhcCe---EEEEEC-------CCCHHHHHHhcCcCc------eEEEEECCCCCCcEecCHHHHHHHHHHcCCE
Confidence 3 3345677 777774 368999999987644 3899999999999999999999999999999
Q ss_pred EEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCC-cceEEEEeCchhHHhhhcCCccccCCccccCCCccCC
Q 048643 282 VHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTL-DCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDY 360 (506)
Q Consensus 282 lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~-~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~ 360 (506)
++||++|+.+....+. . . ++|.++.++||+++.+- ..|.+++.++..+.+.+. .+..
T Consensus 183 lvvD~a~a~~~~~~~~--~----~-gaDivv~S~sK~l~g~g~~~GG~vv~~~~~i~~~~~---~~~~------------ 240 (398)
T PRK07504 183 LVVDNVFATPLFQKPL--E----L-GAHIVVYSATKHIDGQGRCLGGVVLSDKAWIEEHLQ---DYFR------------ 240 (398)
T ss_pred EEEECCccccccCCch--h----h-CCCEEEeeccccccCCccceEEEEEeCcHHHHHHHH---HHHH------------
Confidence 9999999765432221 1 1 68999999999998753 344344444443322111 1111
Q ss_pred CCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc
Q 048643 361 KDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS 413 (506)
Q Consensus 361 ~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~ 413 (506)
.++.......+|..++ |.+.+..++++..+++.++.+.|+++|+++
T Consensus 241 -----~~g~~~s~~~A~~~l~--~L~tl~~R~~~~~~na~~la~~L~~~p~v~ 286 (398)
T PRK07504 241 -----HTGPSLSPFNAWTLLK--GLETLPVRVRQQTESAAAIADFLAGHPKVA 286 (398)
T ss_pred -----HhCCCCCHHHHHHHHh--ccchHHHHHHHHHHHHHHHHHHHHcCCCcc
Confidence 1122345566777776 557788999999999999999999988765
No 142
>PRK07337 aminotransferase; Validated
Probab=99.77 E-value=4.8e-16 Score=160.19 Aligned_cols=320 Identities=12% Similarity=0.067 Sum_probs=199.7
Q ss_pred HHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccC
Q 048643 109 LGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGREN 188 (506)
Q Consensus 109 ~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~ 188 (506)
+.+.+...+......|....+...+++.+.+|+.+.+|...+. ...++|+|+++++..++.+..+
T Consensus 48 ~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~-----~~i~~t~G~~~al~~~~~~l~~---------- 112 (388)
T PRK07337 48 VVEAAARALRRGVTQYTSALGLAPLREAIAAWYARRFGLDVAP-----ERIVVTAGASAALLLACLALVE---------- 112 (388)
T ss_pred HHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCh-----HhEEEecCcHHHHHHHHHHhcC----------
Confidence 3445554444333456555567899999999999988864321 2688999999887666554322
Q ss_pred CCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC-
Q 048643 189 ISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP- 267 (506)
Q Consensus 189 ~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp- 267 (506)
++..|+++..+|......++..|. +++.+|++.++++.+|+++|++.+.+.+ .+|+.+.++|+||.+-+
T Consensus 113 -~gd~Vlv~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~------~~v~l~~p~NPtG~~~~~ 182 (388)
T PRK07337 113 -RGDEVLMPDPSYPCNRHFVAAAEG---RPVLVPSGPAERFQLTAADVEAAWGERT------RGVLLASPSNPTGTSIAP 182 (388)
T ss_pred -CCCEEEEeCCCchhhHHHHHHcCC---EEEEeecCCccCCcCCHHHHHhhcCccc------eEEEEECCCCCCCcCcCH
Confidence 566788899999999999998998 9999999765568999999999886533 36777889999999854
Q ss_pred --hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeE-EcCccccCCC-CcceEEEEeCchhHHhhhcCC
Q 048643 268 --LKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFS-LNAHKWFFTT-LDCCCLWVKDPSALVSSLSTN 343 (506)
Q Consensus 268 --l~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~-~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~ 343 (506)
+++|+++|+++|+|+++|.+|..... .+...... .+ ..+.++ .+++|.++.| ..+|+++..+. +.+.+...
T Consensus 183 ~~~~~i~~~a~~~~~~ii~De~y~~~~~-~~~~~~~~-~~-~~~vi~~~S~SK~~~~~G~RiG~~~~~~~--l~~~l~~~ 257 (388)
T PRK07337 183 DELRRIVEAVRARGGFTIVDEIYQGLSY-DAAPVSAL-SL-GDDVITINSFSKYFNMTGWRLGWLVVPEA--LVGTFEKL 257 (388)
T ss_pred HHHHHHHHHHHHCCCEEEEecccccccc-CCCCcChh-hc-cCCEEEEEechhhcCCchhheeeeecCHH--HHHHHHHH
Confidence 78889999999999999999976432 11111111 11 234444 4789999644 55888877542 22222211
Q ss_pred ccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhc---hhHHHHHHHHHHHHHHHHHHHHHcCCCCc----c--
Q 048643 344 PEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYG---VANLRHFLRSHVNMAKLFERLVASDKRVS----P-- 414 (506)
Q Consensus 344 ~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G---~~g~~~~i~~~~~~a~~l~~~l~~~~~~~----p-- 414 (506)
..+... . ...+..++++..+. .+.+.+..++..+..+++.+.|++. ++. |
T Consensus 258 ~~~~~~----------------~----~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~-~~~~~~~p~~ 316 (388)
T PRK07337 258 AQNLFI----------------C----ASALAQHAALACFEPDTLAIYERRRAEFKRRRDFIVPALESL-GFKVPVMPDG 316 (388)
T ss_pred HHHhcc----------------C----CChHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHhc-CCccccCCCe
Confidence 111100 0 01222233333332 2345666677777888888998886 432 5
Q ss_pred -ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHH-HhcCcEEEeeeeEC---CEEEEEEEecCCCCCHHHHHHHHH
Q 048643 415 -SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESI-NASGKAYMTHAVCG---GIYAMRFAVGATLTEERHVMVAWT 489 (506)
Q Consensus 415 -~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~~g~~~~~~~~~~---g~~~lR~~~~~~~tt~edi~~li~ 489 (506)
..+.+++..... .. .....++.+.+ .+.|+.+..+..+. +..++|+++.. +++++...++
T Consensus 317 g~f~~~~~~~~~~----------~~--~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~Ri~~~~---~~~~l~~~l~ 381 (388)
T PRK07337 317 AFYVYADCRGVAH----------PA--AGDSAALTQAMLHDAGVVLVPGRDFGPHAPRDYIRLSYAT---SMSRLEEAVA 381 (388)
T ss_pred eEEEEEecccccC----------CC--CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCCEEEEEecC---CHHHHHHHHH
Confidence 334444432100 00 00123455554 34566443333232 34799999964 4667777777
Q ss_pred HHHHH
Q 048643 490 MVQEQ 494 (506)
Q Consensus 490 ~l~~~ 494 (506)
.|.++
T Consensus 382 rl~~~ 386 (388)
T PRK07337 382 RLGKL 386 (388)
T ss_pred HHHHH
Confidence 77654
No 143
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.77 E-value=1.7e-16 Score=164.26 Aligned_cols=240 Identities=13% Similarity=0.148 Sum_probs=157.0
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHH
Q 048643 126 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQ 205 (506)
Q Consensus 126 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 205 (506)
..|....+| +.++++.|.+ ..+++++|+.|+..++.+... ++..|+++...|.+..
T Consensus 67 ~~pt~~~le----~~la~l~g~~---------~~v~fsSG~~Ai~~al~~ll~-----------~Gd~VI~~~~~y~~t~ 122 (437)
T PRK05613 67 TNPTVEALE----NRIASLEGGV---------HAVAFASGQAAETAAILNLAG-----------AGDHIVTSPRLYGGTE 122 (437)
T ss_pred cChHHHHHH----HHHHHHhCCC---------eEEEeCCHHHHHHHHHHHhcC-----------CCCEEEECCCccHHHH
Confidence 456555565 4578888874 356777777888766654321 5667888888888764
Q ss_pred ----HHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCE
Q 048643 206 ----KAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIW 281 (506)
Q Consensus 206 ----ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~ 281 (506)
+.+...|+ +++.++ ++ .|+++|+++|+++++ +|+....++++|.+.|+++|+++|+++|+.
T Consensus 123 ~~~~~~l~~~Gi---~v~~vd-~~-----~d~e~l~~~l~~~tk------~V~~e~~~Np~~~v~di~~I~~la~~~gi~ 187 (437)
T PRK05613 123 TLFLVTLNRLGI---EVTFVE-NP-----DDPESWQAAVQPNTK------AFFGETFANPQADVLDIPAVAEVAHRNQVP 187 (437)
T ss_pred HHHHHHHHhcCe---EEEEEC-CC-----CCHHHHHHhCCccCe------EEEEECCCCCCCcccCHHHHHHHHHHcCCe
Confidence 44566788 888887 32 288999999876543 677778889999999999999999999999
Q ss_pred EEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCC-CcceEEEEeCch-hHHhhh--cCCccccCCccccCCCc
Q 048643 282 VHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPS-ALVSSL--STNPEYLKNKATESKQV 357 (506)
Q Consensus 282 lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~-~l~~~~--~~~~~yl~~~~~~~~~~ 357 (506)
+|||++++.+....+ .. -++|.++.++||+++.+ -+.|.+++.+.. ...... ...-+++..........
T Consensus 188 livD~t~a~g~~~~p-~~------~GaDivv~S~~K~l~G~gd~~gG~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (437)
T PRK05613 188 LIVDNTIATAALVRP-LE------LGADVVVASLTKFYTGNGSGLGGVLIDGGKFDWTVERDGKPVFPYFVTPDPAYHGL 260 (437)
T ss_pred EEEECCCccccccCh-HH------hCCCEEEeeccceecCCCcceeEEEEecCcccccccccccccCCCCCCCccccccc
Confidence 999999977654322 11 17999999999999865 334555553321 100000 00001111100000000
Q ss_pred --cCCC----------CccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc
Q 048643 358 --VDYK----------DWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS 413 (506)
Q Consensus 358 --~~~~----------~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~ 413 (506)
.++. .+....+-...+...|+.++ |.+.+..+++++.++|.++++.|+++|.++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~r--gl~TL~lR~~~~~~nA~~lA~~L~~hp~V~ 326 (437)
T PRK05613 261 KYADLGAPAFGLKARAGLLRDTGATLSPFNAWVTAQ--GLDTLSLRLERHNENAIKVAEFLNNHEKVA 326 (437)
T ss_pred cccccchHHHHHHHHHHHHHhcCCCCCHHHHHHHHc--ccCcHHHHHHHHHHHHHHHHHHHHcCCCcc
Confidence 0000 01112233345677777766 668899999999999999999999998765
No 144
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.77 E-value=5.7e-16 Score=159.95 Aligned_cols=304 Identities=11% Similarity=0.043 Sum_probs=187.4
Q ss_pred cccccChhhHHHHHHHHHHHHHHcCCCCccccCCCC-cEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCC
Q 048643 122 FNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNG-GGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQT 200 (506)
Q Consensus 122 ~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~-~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~ 200 (506)
..|....+..++++.+.+|+.+.+|.+.+. . ..++|+|+++++..++.+..+ ++..|+++..+
T Consensus 67 ~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~-----~~~i~vt~G~~~al~~~~~~~~~-----------~gd~Vlv~~P~ 130 (394)
T PRK05942 67 HGYPPFEGTASFRQAITDWYHRRYGVELDP-----DSEALPLLGSKEGLTHLALAYVN-----------PGDVVLVPSPA 130 (394)
T ss_pred ccCCCCCCCHHHHHHHHHHHHHHHCCCcCC-----CCeEEEccChHHHHHHHHHHhCC-----------CCCEEEEcCCC
Confidence 345544556789999999999988865331 1 367788988888766554422 56778889999
Q ss_pred chHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC---hhHHHHHHHH
Q 048643 201 HCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP---LKPLCDVAKQ 277 (506)
Q Consensus 201 H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp---l~~I~~ia~~ 277 (506)
+......+...|. +++.+|++.++++.+|+++|++++.+. +.+|+++.++|+||.+-+ +++|+++|++
T Consensus 131 y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~~~~~------~k~i~l~~P~NPtG~~~s~~~~~~i~~~a~~ 201 (394)
T PRK05942 131 YPAHFRGPLIAGA---QIYPIILKPENDWLIDLSSIPEEVAQQ------AKILYFNYPSNPTTATAPREFFEEIVAFARK 201 (394)
T ss_pred CcchHHHHHHcCC---EEEEeecCCccCCccCHHHHHHhcccc------ceEEEEcCCCCCCCCcCCHHHHHHHHHHHHH
Confidence 9988888888999 999999976556789999999988653 347777889999999976 8899999999
Q ss_pred hCCEEEeecccccccccCccchhh--hcCCCCCCeeEEcCccccC-CCCcceEEEEeCchhHHhhhcCCccccCCccccC
Q 048643 278 FGIWVHVDAAYAGSACICPEFQHF--IDGVEGADSFSLNAHKWFF-TTLDCCCLWVKDPSALVSSLSTNPEYLKNKATES 354 (506)
Q Consensus 278 ~g~~lhVDaA~gg~~~~~~~~~~~--~~gi~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~ 354 (506)
||+|+++|++|+.+..-....... +.+.........++.|.++ ....+|+++.. +.. .+.+.....+...
T Consensus 202 ~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG~i~~~-~~l-~~~l~~~~~~~~~----- 274 (394)
T PRK05942 202 YEIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFVVGN-RHI-IQGLRTLKTNLDY----- 274 (394)
T ss_pred cCeEEEEeccchhhccCCCCCCChhhCCCccccEEEEecchhccCChhhheeeeecC-HHH-HHHHHHHHhhccc-----
Confidence 999999999997544211111111 1111122233556789885 44668888764 333 2333211111100
Q ss_pred CCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c--c-eEEEeecCCCccc
Q 048643 355 KQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS---P--S-AVMDKLKPKYENC 428 (506)
Q Consensus 355 ~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p--~-~v~f~~~~~~~~~ 428 (506)
+ .+ ......+-.+++ ...+.+++..++..++.+++.+.|++. +++ | + .+.+++.+.-
T Consensus 275 ---------~--~~-~~~q~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~~~~~~f~~~~~~~~~--- 337 (394)
T PRK05942 275 ---------G--IF-SALQKAAETALQ-LPDSYLQQVQERYRTRRDFLIQGLGEL-GWNIPPTKATMYLWVPCPVGM--- 337 (394)
T ss_pred ---------C--CC-HHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHHHHC-CCeecCCCeeeEEEEECCCCC---
Confidence 0 00 001111112222 234556677777788888899999876 566 4 4 3334443210
Q ss_pred ccccccchHHHHHHHHHHHHHH-HHhcCcEEEeeeeE--CCEEEEEEEecCCCCCHHHHHHHHHHHHHH
Q 048643 429 HSQQLVTEEEAINEFNRELLES-INASGKAYMTHAVC--GGIYAMRFAVGATLTEERHVMVAWTMVQEQ 494 (506)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~l~~~-l~~~g~~~~~~~~~--~g~~~lR~~~~~~~tt~edi~~li~~l~~~ 494 (506)
+ ..++..+ +.+.|+....+..+ .+..++|+++.. .. +++.++|+++
T Consensus 338 -------~-------~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~~---~~---~~l~~~l~~l 386 (394)
T PRK05942 338 -------G-------STDFALNVLQKTGVVVTPGNAFGEGGEGYVRISLIA---DC---DRLGEALDRL 386 (394)
T ss_pred -------C-------HHHHHHHHHHHCCEEEeCChhhCcCCCCeEEEEecC---CH---HHHHHHHHHH
Confidence 0 1233333 34567654343333 245799999952 33 4444444444
No 145
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.77 E-value=2.1e-16 Score=163.71 Aligned_cols=239 Identities=14% Similarity=0.141 Sum_probs=158.6
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHH
Q 048643 126 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQ 205 (506)
Q Consensus 126 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 205 (506)
..|...++|+. ++++.|.. ..+++++|++|+..++.+... ++..|+++...|.+..
T Consensus 62 ~~p~~~~le~~----lA~l~g~~---------~av~~sSGt~Al~~al~~ll~-----------~Gd~Vi~~~~~y~~t~ 117 (433)
T PRK08134 62 SNPTVAVLEER----VAALEGGV---------GAIATASGQAALHLAIATLMG-----------AGSHIVASSALYGGSH 117 (433)
T ss_pred cChHHHHHHHH----HHHHhCCC---------cEEEeCCHHHHHHHHHHHHhC-----------CCCEEEEeCCccHHHH
Confidence 45666777755 67777754 358899999999887765421 5567888888887665
Q ss_pred HHH----HHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCE
Q 048643 206 KAA----QIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIW 281 (506)
Q Consensus 206 ka~----~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~ 281 (506)
..+ ...|+ +++.++++ |+++|+++|++.++ +|++...++++|.+-|+++|+++|+++|++
T Consensus 118 ~~~~~~l~~~Gi---~v~~vd~~-------d~~~l~~~i~~~Tk------lV~~e~~~np~g~v~Di~~I~~la~~~gi~ 181 (433)
T PRK08134 118 NLLHYTLRRFGI---ETTFVKPG-------DIDGWRAAIRPNTR------LLFGETLGNPGLEVLDIPTVAAIAHEAGVP 181 (433)
T ss_pred HHHHHHHhhCCe---EEEEECCC-------CHHHHHHhcCCCCe------EEEEECCCcccCcccCHHHHHHHHHHcCCE
Confidence 544 34688 88888753 78999999987554 788888999999999999999999999999
Q ss_pred EEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCc-ceEEEEeCchh-HHh--hh-cCCccccCCccccCCC
Q 048643 282 VHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLD-CCCLWVKDPSA-LVS--SL-STNPEYLKNKATESKQ 356 (506)
Q Consensus 282 lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~-~g~~~~r~~~~-l~~--~~-~~~~~yl~~~~~~~~~ 356 (506)
++||++++.+....+. . -++|.++.+.|||++.+-. .|.+++..... +.. .+ ...++...........
T Consensus 182 livD~t~a~~~~~~pl-~------~GaD~vv~S~tK~l~g~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 254 (433)
T PRK08134 182 LLVDSTFTTPYLLRPF-E------HGADLVYHSATKFLGGHGTAIGGVLVDGGRFDWEASGKFPELTEPYAGFHGMVFAE 254 (433)
T ss_pred EEEECCCcccccCCch-h------cCCCEEEeccccccCCCCCceEEEEEecCccccccccccccccCCcccccccchhh
Confidence 9999999877654331 1 1899999999999987643 44454432211 000 00 0001110000000000
Q ss_pred ccCCCC--------ccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc
Q 048643 357 VVDYKD--------WQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS 413 (506)
Q Consensus 357 ~~~~~~--------~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~ 413 (506)
...... .....+....+..+|..++ |.+.+..++++..++|..+.+.|+++|.++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~G~~ls~~~A~l~~~--gL~tl~~R~~~~~~nA~~la~~L~~~p~V~ 317 (433)
T PRK08134 255 ESTVAAFLLRARREGLRDFGACLSPMNAWQLLQ--GIETLPLRMERHVANTRKVVAFLASHPAVA 317 (433)
T ss_pred ccchhHHHHHHHHHHHHhcCCCCCHHHHHHHhc--CCCcHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 000000 0011122345566676665 667899999999999999999999988765
No 146
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.77 E-value=1.6e-16 Score=163.12 Aligned_cols=281 Identities=15% Similarity=0.146 Sum_probs=183.9
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHH
Q 048643 126 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQ 205 (506)
Q Consensus 126 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 205 (506)
..|...++|+. +++++|.+ ..+++++|+.|+..++.+... ++..|+++...|....
T Consensus 59 ~~pt~~~Le~~----lA~l~G~~---------~al~~~sG~~Ai~~~l~al~~-----------~Gd~Vv~~~~~y~~~~ 114 (386)
T PRK06767 59 GNPTVKLFEER----MAVLEGGE---------EALAFGSGMAAISATLIGFLK-----------AGDHIICSNGLYGCTY 114 (386)
T ss_pred CCcchHHHHHH----HHHHhCCC---------cEEEECCHHHHHHHHHHHHhC-----------CCCEEEEcCCcHHHHH
Confidence 55666667654 77777754 357788888877666554432 5667888888887655
Q ss_pred HHHHH----hCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCE
Q 048643 206 KAAQI----VGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIW 281 (506)
Q Consensus 206 ka~~~----~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~ 281 (506)
..+.. .|+ ++..++ ..|++++++++++.+ .+|++..++|++|.+-|+++|+++|+++|++
T Consensus 115 ~~~~~~~~~~gi---~~~~~~-------~~d~~~l~~~i~~~t------klV~lesp~NptG~v~dl~~I~~la~~~g~~ 178 (386)
T PRK06767 115 GFLEVLEEKFMI---THSFCD-------METEADIENKIRPNT------KLIFVETPINPTMKLIDLKQVIRVAKRNGLL 178 (386)
T ss_pred HHHHHHHhhcCe---EEEEeC-------CCCHHHHHHhhCcCc------eEEEEeCCCCCCceecCHHHHHHHHHHcCCE
Confidence 55433 344 444443 347899999886543 3888899999999999999999999999999
Q ss_pred EEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCc--ceEEEEeCchhHHhhhcCCccccCCccccCCCccC
Q 048643 282 VHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLD--CCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVD 359 (506)
Q Consensus 282 lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 359 (506)
++||++|+.+....+ . . .++|.++.+.+|+++.+-. .|+++.++.. +.+........+.
T Consensus 179 vivD~a~a~~~~~~p-l---~---~g~Div~~S~sK~l~g~g~~~gG~v~~~~~~-i~~~~~~~~~~~g----------- 239 (386)
T PRK06767 179 VIVDNTFCSPYLQRP-L---E---LGCDAVVHSATKYIGGHGDVVAGVTICKTRA-LAEKIRPMRKDIG----------- 239 (386)
T ss_pred EEEECCCcccccCCc-h---h---cCCcEEEecCcceecCCCCceeEEEEeChHH-HHHHHHHHHHHhC-----------
Confidence 999999975443322 1 1 2789999999999987755 5777665542 2221110000000
Q ss_pred CCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc----c-------------ceEEEeec
Q 048643 360 YKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS----P-------------SAVMDKLK 422 (506)
Q Consensus 360 ~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~----p-------------~~v~f~~~ 422 (506)
-...++..|+.++. .+.+..++++..+++.++++.|+++|+++ | ++|+|.+.
T Consensus 240 ---------~~~~~~~a~l~~~~--L~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~ 308 (386)
T PRK06767 240 ---------GIMAPFDAWLLLRG--LKTLAVRMDRHCDNAEKIVSFLKNHDAVEGVWYPEGELASRQMKRGGGVISFSIK 308 (386)
T ss_pred ---------CCCCHHHHHHHHcC--CCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCcHHHHHhCCCCCceEEEEEc
Confidence 01133556666654 45667788999999999999999999876 3 57888875
Q ss_pred CCCcccccccccchHHHHHHHHHHHHHHHHhcCcE--------EEe-ee--e---E-------C--CEEEEEEEecCCCC
Q 048643 423 PKYENCHSQQLVTEEEAINEFNRELLESINASGKA--------YMT-HA--V---C-------G--GIYAMRFAVGATLT 479 (506)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~--------~~~-~~--~---~-------~--g~~~lR~~~~~~~t 479 (506)
.. .+...++.++|..-+.. .+. +. . . . ..+.+|+|+.
T Consensus 309 ~~----------------~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svG---- 368 (386)
T PRK06767 309 GG----------------KEETQAFINDLHFITIAVSLGDTETLIQHPATMTHAAIPAELRQEMGIYDNLIRLSVG---- 368 (386)
T ss_pred CC----------------HHHHHHHHHhCCccEEecCCCCcCccccCCCccccccCCHHHHHhcCCCCCeEEEEec----
Confidence 32 12234566665433221 011 10 0 0 1 1467999994
Q ss_pred CHHHHHHHHHHHHHHHHH
Q 048643 480 EERHVMVAWTMVQEQLEA 497 (506)
Q Consensus 480 t~edi~~li~~l~~~~~~ 497 (506)
-||++.|++.|++..+.
T Consensus 369 -lE~~~dl~~dl~~al~~ 385 (386)
T PRK06767 369 -LESWEDIVSDLEQALKK 385 (386)
T ss_pred -cCCHHHHHHHHHHHHhh
Confidence 34788888888877653
No 147
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.77 E-value=2.5e-16 Score=161.76 Aligned_cols=217 Identities=16% Similarity=0.218 Sum_probs=153.5
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHH
Q 048643 126 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQ 205 (506)
Q Consensus 126 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 205 (506)
..|...++| +.+++++|.+ ..++++||++|+..++.+... ++..|+++...|.+..
T Consensus 59 ~~p~~~~le----~~la~l~g~~---------~~v~~ssG~~Ai~~al~al~~-----------~Gd~Vi~~~~~y~~t~ 114 (390)
T PRK08133 59 TNPTVTMFQ----ERLAALEGAE---------ACVATASGMAAILAVVMALLQ-----------AGDHVVSSRSLFGSTV 114 (390)
T ss_pred CChHHHHHH----HHHHHHhCCC---------cEEEECCHHHHHHHHHHHHhC-----------CCCEEEEccCcchhHH
Confidence 345555555 5577888864 458889999999877765432 5567888888886544
Q ss_pred ----HHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCE
Q 048643 206 ----KAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIW 281 (506)
Q Consensus 206 ----ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~ 281 (506)
+.+...|+ +++.++++ |++++++++++.+ .+|+++.++|++|.+.|+++|+++|+++|++
T Consensus 115 ~~~~~~~~~~G~---~v~~vd~~-------d~~~l~~~i~~~t------klV~ie~p~NptG~v~dl~~I~~la~~~gi~ 178 (390)
T PRK08133 115 SLFEKIFARFGI---ETTFVDLT-------DLDAWRAAVRPNT------KLFFLETPSNPLTELADIAALAEIAHAAGAL 178 (390)
T ss_pred HHHHHHHHHcCc---EEEEECCC-------CHHHHHHhcCcCC------eEEEEECCCCCCCCcCCHHHHHHHHHHcCCE
Confidence 35566788 88888753 7889998887643 3788889999999999999999999999999
Q ss_pred EEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCc-c-eEEEEeCchhHHhhhcCCccccCCccccCCCccC
Q 048643 282 VHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLD-C-CCLWVKDPSALVSSLSTNPEYLKNKATESKQVVD 359 (506)
Q Consensus 282 lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~-~-g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 359 (506)
++||++|+.+....+ .. .++|.++.++||+++.+-. . |+++.+ +..+.+.. .++..
T Consensus 179 livD~t~~~~~~~~p-l~------~g~Divv~S~sK~~~g~g~~~GG~vv~~-~~~~~~~~----~~~~~---------- 236 (390)
T PRK08133 179 LVVDNCFCTPALQQP-LK------LGADVVIHSATKYLDGQGRVLGGAVVGS-KELMEEVF----GFLRT---------- 236 (390)
T ss_pred EEEECCCcccccCCc-hh------hCCcEEEeecceeecCCcceEeEEEEcC-HHHHHHHH----HHHHH----------
Confidence 999999976544322 11 1689999999999987643 3 444443 33322111 11110
Q ss_pred CCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc
Q 048643 360 YKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS 413 (506)
Q Consensus 360 ~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~ 413 (506)
++.....+..|..++ |.+.+..++++..+++.++.+.|++.|+++
T Consensus 237 -------~g~~~~~~~a~~~l~--gl~tl~~R~~~~~~~a~~la~~L~~~p~v~ 281 (390)
T PRK08133 237 -------AGPTLSPFNAWVFLK--GLETLSLRMEAHSANALALAEWLEAHPGVE 281 (390)
T ss_pred -------hCCCCCHHHHHHHHc--ccchHHHHHHHHHHHHHHHHHHHHhCCCee
Confidence 111234456676665 556888999999999999999999987765
No 148
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.77 E-value=1.4e-16 Score=163.49 Aligned_cols=220 Identities=17% Similarity=0.215 Sum_probs=154.1
Q ss_pred ccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchH-
Q 048643 125 ISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCA- 203 (506)
Q Consensus 125 ~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s- 203 (506)
...|...++|+. +++++|.+ ..+++++|+.|+..++.+... ++..|+++...|.+
T Consensus 56 ~~~p~~~~le~~----lA~l~g~~---------~av~~~sG~~Ai~~~l~al~~-----------~Gd~Vi~~~~~y~~t 111 (391)
T TIGR01328 56 LGNPTVSNLEGR----IAFLEGTE---------AAVATSSGMGAIAATLLTILK-----------AGDHLISDECLYGCT 111 (391)
T ss_pred CCCchHHHHHHH----HHHHhCCC---------cEEEECCHHHHHHHHHHHHhC-----------CCCEEEEecCcchHH
Confidence 345666677755 77777765 358888889888776655422 55567778776643
Q ss_pred ---HHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCC
Q 048643 204 ---LQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGI 280 (506)
Q Consensus 204 ---~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~ 280 (506)
+...+...|+ +++.++.+ |++++++++++.+ .+|++..+++++|.+-|+++|+++|+++|+
T Consensus 112 ~~~~~~~~~~~G~---~~~~vd~~-------d~e~l~~~i~~~t------klV~le~p~Np~G~v~dl~~I~~la~~~gi 175 (391)
T TIGR01328 112 FALLEHALTKFGI---QVDFINMA-------IPEEVKAHIKDNT------KIVYFETPANPTMKLIDMERVCRDAHSQGV 175 (391)
T ss_pred HHHHHHHHhcCCe---EEEEECCC-------CHHHHHHhhccCC------eEEEEECCCCCCCcccCHHHHHHHHHHcCC
Confidence 3445556777 78777653 7889999887543 378889999999999999999999999999
Q ss_pred EEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCc--ceEEEEeCchhHHhhhcCCccccCCccccCCCcc
Q 048643 281 WVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLD--CCCLWVKDPSALVSSLSTNPEYLKNKATESKQVV 358 (506)
Q Consensus 281 ~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~ 358 (506)
+++||++|+.+....+ .. .++|.++.+++|+++.+-+ .|++ +.+++.+.+.......++
T Consensus 176 ~livD~a~a~~~~~~~-~~------~g~Divv~S~sK~lgg~g~~~gG~v-~~~~~li~~l~~~~~~~~----------- 236 (391)
T TIGR01328 176 KVIVDNTFATPMLTNP-VA------LGVDVVVHSATKYIGGHGDVVAGLI-CGKAELLQQIRMVGIKDM----------- 236 (391)
T ss_pred EEEEECCCchhccCCc-hh------cCCCEEEccccccccCCCCceEEEE-EcCHHHHHHHHHHHHHhC-----------
Confidence 9999999976543221 11 2799999999999998755 3544 455543322211000000
Q ss_pred CCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc
Q 048643 359 DYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS 413 (506)
Q Consensus 359 ~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~ 413 (506)
.+....+...|..++ +.+.+..++++..++++++.+.|+++|+++
T Consensus 237 --------~g~~l~~~~a~l~l~--~L~tl~~r~~~~~~na~~la~~L~~~p~v~ 281 (391)
T TIGR01328 237 --------TGSVISPFDAWLILR--GLKTLNIRMKRHSENAMKVAEYLKSHPAVE 281 (391)
T ss_pred --------CCCCCCcHHHHHHHh--CcCcHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 111234456677776 456677889999999999999999988765
No 149
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.76 E-value=4.3e-16 Score=166.59 Aligned_cols=364 Identities=13% Similarity=0.113 Sum_probs=222.3
Q ss_pred HHHHHHHHhcCCCCCCCCCCccccC-----CCCCCHHHHHHHH-HH-hhcC-CCCcccccChhhHHHHHHHHHHHHHHcC
Q 048643 75 ILQDVQEHIVPGVTHWQSPNYFAYF-----PSSGSIAGFLGEM-LS-SGFN-VVGFNWISSPAATELENIVMDWLGQMLK 146 (506)
Q Consensus 75 il~~~~~~~~~~~~~~~~p~~~~~~-----~~~~~~~~~~~~~-l~-~~~n-~~~~~~~~~p~~~~lE~~~~~~la~l~g 146 (506)
+++.|.+....+...|+-|.+.|-. |.+.......++- +. ...+ ......-..|.....|.+ +..|+.||
T Consensus 132 ~~~aL~~y~~~~~~sfh~PGHkgG~~~~k~p~G~~f~~f~Gen~~r~Dlt~ev~~LddLl~~~G~i~eAe--~~aA~~fg 209 (713)
T PRK15399 132 FTKALFTYVKEGKYTFCTPGHMGGTAYQKSPVGCLFYDFFGGNTLKADVSISVTELGSLLDHTGPHLEAE--EYIARTFG 209 (713)
T ss_pred HHHHHHHHHhCCCceeeCCCCCCCCCCCCCchhHHHHHHhhhhhhhhhccccccCCCCCCCCChHHHHHH--HHHHHHhC
Confidence 4556666666777888888777521 1111222233321 11 1111 111222233444455554 88899999
Q ss_pred CCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCC
Q 048643 147 LPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKS 226 (506)
Q Consensus 147 ~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~ 226 (506)
.+.++ ++++|+|.+|..++.++.. ++..|+++..+|-|+..++.+.|+ ..++++...+
T Consensus 210 Ad~ty--------fvvNGTS~~n~av~~a~~~-----------~Gd~VLvdRN~HKSv~~aLilsga---~PVYl~P~~n 267 (713)
T PRK15399 210 AEQSY--------IVTNGTSTSNKIVGMYAAP-----------AGSTLLIDRNCHKSLAHLLMMSDV---VPIWLKPTRN 267 (713)
T ss_pred CCcEE--------EEeCChHHHHHHHHHHhcC-----------CCCEEEeecccHHHHHHHHHHcCC---eeEEeccccc
Confidence 99875 8899999999888877654 678899999999999999999999 8898876532
Q ss_pred CC---cccCH-----HHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEE-EeecccccccccCcc
Q 048643 227 SS---YGLSP-----DSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWV-HVDAAYAGSACICPE 297 (506)
Q Consensus 227 ~~---~~~d~-----~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~l-hVDaA~gg~~~~~~~ 297 (506)
.- +.+++ +.++++|++... -.+|..+++|.+ |..|.+-++++|+++| |+.+ |||.|||+.+.+.|.
T Consensus 268 ~~Gi~g~I~~~~~~~e~I~~~i~~~p~-~~~p~~vvit~p-TYdGi~yd~~~I~~~~---g~~~ilvDEAhgah~~F~p~ 342 (713)
T PRK15399 268 ALGILGGIPRREFTRDSIEEKVAATTQ-AQWPVHAVITNS-TYDGLLYNTDWIKQTL---DVPSIHFDSAWVPYTHFHPI 342 (713)
T ss_pred ccCCcCCCChhhccHHHHHHHHHhCCC-cCCceEEEEECC-CCCceeeCHHHHHHHh---CCCEEEEeccchhhhhcCcc
Confidence 21 24555 999999987643 246788888887 6889999999999999 6666 899999999888775
Q ss_pred chh--hhcCCCCCCee---EEcCccccCCCCcceEEEEeCch---hHHhhh----cCCccccCCccccCCCccCCCCccc
Q 048643 298 FQH--FIDGVEGADSF---SLNAHKWFFTTLDCCCLWVKDPS---ALVSSL----STNPEYLKNKATESKQVVDYKDWQI 365 (506)
Q Consensus 298 ~~~--~~~gi~~aDsi---~~~~hK~l~~p~~~g~~~~r~~~---~l~~~~----~~~~~yl~~~~~~~~~~~~~~~~~~ 365 (506)
++. .+.+..++|.+ +.+.||.|.+--.++++.++..- .+.+++ +.+|.|+--
T Consensus 343 ~~~~sam~~~~~aD~~i~~tQStHKtL~alTQaS~iHvk~~vd~~~~n~a~~m~~STSPsY~Lm---------------- 406 (713)
T PRK15399 343 YQGKSGMSGERVPGKVIFETQSTHKMLAAFSQASLIHIKGEYDEETFNEAFMMHTSTSPSYPIV---------------- 406 (713)
T ss_pred cCCcChhhCCCCCCeeeeeeeehhccccccchheeeeecCCCCHHHHHHHHHHHcCCCcHHHHH----------------
Confidence 542 22232367888 99999999998899999987531 122222 111222110
Q ss_pred cCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCC------Cc---c----ceEEEeecCC--------
Q 048643 366 TLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKR------VS---P----SAVMDKLKPK-------- 424 (506)
Q Consensus 366 ~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~------~~---p----~~v~f~~~~~-------- 424 (506)
. .+=.+.+.+....-++++++.++++..|++.|.+..+ |+ | ..-||.+.|.
T Consensus 407 ------A--SLD~a~~~m~~~~G~~l~~~~i~~a~~fR~~l~~~~~~~~~w~f~~~~~~~~~~~~~w~l~p~~~whgf~~ 478 (713)
T PRK15399 407 ------A--SVETAAAMLRGNPGKRLINRSVERALHFRKEVQRLREESDGWFFDIWQPENVDEAECWPVAPGEQWHGFKD 478 (713)
T ss_pred ------H--HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhccccccCceeeecCccccCCccceecCCCcccccccc
Confidence 1 1112222222112245778888888888888877654 33 2 1122322221
Q ss_pred -----------Ccccccccc--cchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHH
Q 048643 425 -----------YENCHSQQL--VTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMV 491 (506)
Q Consensus 425 -----------~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l 491 (506)
+.....++- ....+....-...+.+.|.+.|++ +.-+ +...+=+.+ ++..+++++++|+++|
T Consensus 479 ~~~~~~~lDP~KltI~t~g~~~~g~~~~~Gi~g~~l~~~L~e~gI~-~E~~---d~~~vL~l~-s~g~t~~~~~~L~~aL 553 (713)
T PRK15399 479 ADADHMFLDPVKVTILTPGMDEQGNMSEEGIPAALVAKFLDERGIV-VEKT---GPYNLLFLF-SIGIDKTKAMGLLRGL 553 (713)
T ss_pred cccccccCCCceEEEEecCcccccccccCCCCHHHHHHHHHHcCCE-EEec---CCCeEEEEe-CCCCCHHHHHHHHHHH
Confidence 000000000 000000011123455566666763 3332 233344444 5778999999999999
Q ss_pred HHHHH
Q 048643 492 QEQLE 496 (506)
Q Consensus 492 ~~~~~ 496 (506)
.++.+
T Consensus 554 ~~f~~ 558 (713)
T PRK15399 554 TEFKR 558 (713)
T ss_pred HHHHH
Confidence 98854
No 150
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.76 E-value=6.7e-16 Score=158.83 Aligned_cols=307 Identities=13% Similarity=0.087 Sum_probs=191.3
Q ss_pred cccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCc
Q 048643 122 FNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTH 201 (506)
Q Consensus 122 ~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H 201 (506)
..|....+..++.+.+.+|+++.+|.+.+. ....++|+|+++++..++.+..+ ++..|+++..++
T Consensus 61 ~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~----~~~vi~t~G~~~~l~~~~~~~~~-----------~gd~vlv~~P~y 125 (383)
T TIGR03540 61 HRYPSYEGMLAYRQAVADWYKRRFGVELDP----ETEVLSLIGSKEGIAHIPLAFVN-----------PGDIVLVPDPGY 125 (383)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHhhCCCCCC----CCeEEECCCcHHHHHHHHHHhCC-----------CCCEEEEeCCCC
Confidence 345444456789999999999988875331 01466788888887666554322 567788899999
Q ss_pred hHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC---hhHHHHHHHHh
Q 048643 202 CALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP---LKPLCDVAKQF 278 (506)
Q Consensus 202 ~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp---l~~I~~ia~~~ 278 (506)
..+..+++.+|. +++.+|++.++++.+|+++|++++.+. +.+|+++.++|+||.+-+ +++|+++|++|
T Consensus 126 ~~~~~~~~~~G~---~v~~v~~~~~~g~~~d~~~l~~~~~~~------~~~v~i~~P~NPtG~~~~~~~~~~i~~~a~~~ 196 (383)
T TIGR03540 126 PVYRIGTLFAGG---EPYEMPLKEENGFLPDFDAIPEDIAKK------AKLMFINYPNNPTGAVAPLKFFKELVEFAKEY 196 (383)
T ss_pred cchHHHHHhcCC---EEEEEecCcccCCccCHHHHHhhcccc------ceEEEEeCCCCCcCccCCHHHHHHHHHHHHHc
Confidence 888899999999 999999975445788999999988643 347777889999999976 78999999999
Q ss_pred CCEEEeecccccccccCccchhh--hcCCCCCCeeEEcCccccCCC-CcceEEEEeCchhHHhhhcCCccccCCccccCC
Q 048643 279 GIWVHVDAAYAGSACICPEFQHF--IDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSALVSSLSTNPEYLKNKATESK 355 (506)
Q Consensus 279 g~~lhVDaA~gg~~~~~~~~~~~--~~gi~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~ 355 (506)
|+++++|.+|+............ +.+...-.....++.|.++.| .-+|+++. +++.. +.+.....+...
T Consensus 197 ~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~i~-~~~l~-~~~~~~~~~~~~------ 268 (383)
T TIGR03540 197 NIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIGMAVG-NADLI-AGLGKVKTNVDS------ 268 (383)
T ss_pred CEEEEEecchhhhccCCCCCcCcccCCCcccCEEEEEecccccCCccceeeEEeC-CHHHH-HHHHHHHHhccc------
Confidence 99999999997543211111111 111111224456778998644 55787764 33332 222210001000
Q ss_pred CccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c--ce-EEEeecCCCcccc
Q 048643 356 QVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS---P--SA-VMDKLKPKYENCH 429 (506)
Q Consensus 356 ~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p--~~-v~f~~~~~~~~~~ 429 (506)
..+ ......+..++.. +.+.++++.++..++++.+.+.|++. ++. | +. +.+++.+.
T Consensus 269 ----------~~~-~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~~~~~~~~~~~l~~~----- 330 (383)
T TIGR03540 269 ----------GVF-QAIQYAAIAALNG-PQDVVKEIRKIYQRRRDLLLEALKKI-GIDVEKPKATFYVWVPVPEG----- 330 (383)
T ss_pred ----------CCC-hHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHHHHHHHHhC-CCEecCCCcceEEEEECCCC-----
Confidence 000 0011111222221 34566777777888899999999987 676 4 33 44444321
Q ss_pred cccccchHHHHHHHHHHHHHHHH-hcCcEEEeeeeEC--CEEEEEEEecCCCCCHHHHHHHHHHHHH
Q 048643 430 SQQLVTEEEAINEFNRELLESIN-ASGKAYMTHAVCG--GIYAMRFAVGATLTEERHVMVAWTMVQE 493 (506)
Q Consensus 430 ~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lR~~~~~~~tt~edi~~li~~l~~ 493 (506)
....++.+.+. +.|+....+..+. +..++|+++.. +++++.+.++.|.+
T Consensus 331 ------------~~~~~~~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~~---~~~~l~~~l~~l~~ 382 (383)
T TIGR03540 331 ------------YTSAEFAARLLEETGVVVTPGVGFGEYGEGYIRISLTV---PDERLEEAVARIKK 382 (383)
T ss_pred ------------CCHHHHHHHHHHHCCEEEecchhhCccCCCeEEEEecC---CHHHHHHHHHHHhh
Confidence 01245666654 4566443332222 34689999953 45677777766543
No 151
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.76 E-value=2e-16 Score=162.19 Aligned_cols=312 Identities=14% Similarity=0.080 Sum_probs=194.8
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHH
Q 048643 126 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQ 205 (506)
Q Consensus 126 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 205 (506)
.+|...++|+. +++++|.+ ..++++|||+|+..++.+..-. ++..|+++..+|.+..
T Consensus 31 ~g~~~~~le~~----la~~~g~~---------~~v~~~sgt~al~lal~al~~~----------~Gd~Viv~~~~~~~~~ 87 (379)
T PRK11658 31 TGPKNQALEQA----FCQLTGNQ---------HAIAVSSATAGMHITLMALGIG----------PGDEVITPSLTWVSTL 87 (379)
T ss_pred CCHhHHHHHHH----HHHHhCCC---------eEEEECCHHHHHHHHHHHcCCC----------CCCEEEECCCcHHHHH
Confidence 46777777766 56666664 3578899999988777654211 5677889999999999
Q ss_pred HHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEee
Q 048643 206 KAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVD 285 (506)
Q Consensus 206 ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVD 285 (506)
.++...|+ +++.++++++ ++.+|+++|++++.+.++ +|+.+ +.+|...|+++|+++|+++|+++++|
T Consensus 88 ~~~~~~G~---~~v~vd~~~~-~~~~d~~~l~~~i~~~tk------av~~~---~~~G~~~d~~~i~~~a~~~gi~vi~D 154 (379)
T PRK11658 88 NMIVLLGA---TPVMVDVDRD-TLMVTPEAIEAAITPRTK------AIIPV---HYAGAPADLDAIRAIGERYGIPVIED 154 (379)
T ss_pred HHHHHcCC---EEEEEecCCC-cCCcCHHHHHHhcccCCe------EEEEe---CCCCCcCCHHHHHHHHHHcCCeEEEE
Confidence 99999999 9999999864 468999999999875433 55533 45899999999999999999999999
Q ss_pred cccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhh--cCCccccCCccc-cCCCccCCCC
Q 048643 286 AAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSL--STNPEYLKNKAT-ESKQVVDYKD 362 (506)
Q Consensus 286 aA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~--~~~~~yl~~~~~-~~~~~~~~~~ 362 (506)
+||+.+....... + |-.+.+.++++.+|++.++ ..|++++.+++...+.. .....+...... .....+.+..
T Consensus 155 ~a~a~g~~~~~~~---~-g~~g~~~~Sf~~~K~l~~g-~GG~v~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~ 229 (379)
T PRK11658 155 AAHAVGTYYKGRH---I-GARGTAIFSFHAIKNITCA-EGGLVVTDDDELADRLRSLKFHGLGVDAFDRQTQGRAPQAEV 229 (379)
T ss_pred CCCccCCeECCee---c-CCCCCEEEeCCCCCcCccc-CceEEEECCHHHHHHHHHHHHcCCCcchhhhhcccCCCccee
Confidence 9997554332111 1 1124577888999998654 35556555555432221 111111100000 0000000000
Q ss_pred ccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c--------ceEEEeecCCCcccccc
Q 048643 363 WQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS---P--------SAVMDKLKPKYENCHSQ 431 (506)
Q Consensus 363 ~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p--------~~v~f~~~~~~~~~~~~ 431 (506)
...+..++...+-+++.....+++.+..++..++++++.+.|++.+... | .++++++.+..
T Consensus 230 --~~~G~n~~~~~l~AAl~~~ql~~l~~~~~~r~~~a~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 301 (379)
T PRK11658 230 --LTPGYKYNLADINAAIALVQLAKLEALNARRREIAARYLQALADLPFQPLSLPAWPHQHAWHLFIIRVDEER------ 301 (379)
T ss_pred --eccccccCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCcCCCCCCceeEEEEEEEECCcc------
Confidence 0112223333455666666678999999999999999999999875322 2 23445553210
Q ss_pred cccchHHHHHHHHHHHHHHHHhcCcEEE---eeeeE----C--------------CEEEEEEEecCCCCCHHHHHHHHHH
Q 048643 432 QLVTEEEAINEFNRELLESINASGKAYM---THAVC----G--------------GIYAMRFAVGATLTEERHVMVAWTM 490 (506)
Q Consensus 432 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~---~~~~~----~--------------g~~~lR~~~~~~~tt~edi~~li~~ 490 (506)
. .....++.+.|.+.|+..- .+... . ....+-+- +++..+++|++.+++.
T Consensus 302 ----~----~~~r~~~~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lP-~~~~l~~~~~~~i~~~ 372 (379)
T PRK11658 302 ----C----GISRDALMEALKERGIGTGLHFRAAHTQKYYRERFPTLSLPNTEWNSERICSLP-LFPDMTDADVDRVITA 372 (379)
T ss_pred ----c----cCCHHHHHHHHHHCCCCCcccCcCcccChhhhccCCCCCChHHHHHHhCeEEcc-CCCCCCHHHHHHHHHH
Confidence 0 0012456666666665210 01000 0 11233333 3678899999999999
Q ss_pred HHHHH
Q 048643 491 VQEQL 495 (506)
Q Consensus 491 l~~~~ 495 (506)
|+++.
T Consensus 373 i~~~~ 377 (379)
T PRK11658 373 LQQIA 377 (379)
T ss_pred HHHHH
Confidence 99864
No 152
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.76 E-value=4.9e-16 Score=159.86 Aligned_cols=306 Identities=13% Similarity=0.104 Sum_probs=195.3
Q ss_pred cccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCc
Q 048643 122 FNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTH 201 (506)
Q Consensus 122 ~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H 201 (506)
..|....+...+++.+.+|+.+.+|++.+. ...++|+|+++++..++.+... ++..|+++..++
T Consensus 60 ~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~-----~~i~it~G~~~al~~~~~~~~~-----------~gd~vlv~~p~y 123 (384)
T PRK06348 60 TRYTDSGGDVELIEEIIKYYSKNYDLSFKR-----NEIMATVGACHGMYLALQSILD-----------PGDEVIIHEPYF 123 (384)
T ss_pred CCCCCCCCcHHHHHHHHHHHHHHhCCCCCh-----hhEEEcCChHHHHHHHHHHhcC-----------CCCEEEEeCCCC
Confidence 445555566789999999999888765432 3789999999888776665533 556788899999
Q ss_pred hHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCccc---ChhHHHHHHHHh
Q 048643 202 CALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVD---PLKPLCDVAKQF 278 (506)
Q Consensus 202 ~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~id---pl~~I~~ia~~~ 278 (506)
.....+++.+|. +++.+|.++++++.+|+++|++++++.+ .+|+++.++|+||.+- .+++|+++|++|
T Consensus 124 ~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~~~~~~------~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~ 194 (384)
T PRK06348 124 TPYKDQIEMVGG---KPIILETYEEDGFQINVKKLEALITSKT------KAIILNSPNNPTGAVFSKETLEEIAKIAIEY 194 (384)
T ss_pred cchHHHHHHcCC---EEEEecCCcCcCCcCCHHHHHHhhCcCc------cEEEEeCCCCCCCcCCCHHHHHHHHHHHHHC
Confidence 999999999999 8999987544457899999999886432 2566778999999985 478899999999
Q ss_pred CCEEEeecccccccccCccchhh--hcCCCCCCeeEEcCccccC-CCCcceEEEEeCchhHHhhhcCCccccCCccccCC
Q 048643 279 GIWVHVDAAYAGSACICPEFQHF--IDGVEGADSFSLNAHKWFF-TTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESK 355 (506)
Q Consensus 279 g~~lhVDaA~gg~~~~~~~~~~~--~~gi~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~ 355 (506)
|+++++|.+|+.+..-. ..... +.+...-..+..++.|.++ ....+|+++..+. +...+.....+..
T Consensus 195 ~~~ii~De~y~~~~~~~-~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~v~~~~--~~~~~~~~~~~~~------- 264 (384)
T PRK06348 195 DLFIISDEVYDGFSFYE-DFVPMATLAGMPERTITFGSFSKDFAMTGWRIGYVIAPDY--IIETAKIINEGIC------- 264 (384)
T ss_pred CeEEEEecccccceeCC-CccchhhcCCCcCcEEEEecchhccCCccccceeeecCHH--HHHHHHHHHHhcc-------
Confidence 99999999998654321 11111 1111122244567899998 5577888877432 2222221111100
Q ss_pred CccCCCCccccCCCCCCchHHHHHHHHh--chhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c--ceEE-EeecCCCcc
Q 048643 356 QVVDYKDWQITLSRRFRSLKLWLVIRNY--GVANLRHFLRSHVNMAKLFERLVASDKRVS---P--SAVM-DKLKPKYEN 427 (506)
Q Consensus 356 ~~~~~~~~~~~~sr~~~al~~~~~l~~~--G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p--~~v~-f~~~~~~~~ 427 (506)
+ +. ..+...++...+ ..+.++++.+...+..+++.+.|++.++++ | +.++ +++.....
T Consensus 265 -------~---~~---~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~~p~gg~~~~~~~~~~~~- 330 (384)
T PRK06348 265 -------F---SA---PTISQRAAIYALKHRDTIVPLIKEEFQKRLEYAYKRIESIPNLSLHPPKGSIYAFINIKKTGL- 330 (384)
T ss_pred -------C---CC---CHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCCceeccCCeeEEEEEecccCCC-
Confidence 0 00 111112222222 233455666667777888999998877765 4 4333 34332110
Q ss_pred cccccccchHHHHHHHHHHHHHHHH-hcCcEEEeeeeEC--CEEEEEEEecCCCCCHHHHHHHHHHHHHH
Q 048643 428 CHSQQLVTEEEAINEFNRELLESIN-ASGKAYMTHAVCG--GIYAMRFAVGATLTEERHVMVAWTMVQEQ 494 (506)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lR~~~~~~~tt~edi~~li~~l~~~ 494 (506)
...++.+.+. +.|+.+..+..+. +..++|++++ .++++++..++.|.++
T Consensus 331 ---------------~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~---~~~~~l~~al~~l~~~ 382 (384)
T PRK06348 331 ---------------SSVEFCEKLLKEAHVLVIPGKAFGESGEGYIRLACT---VGIEVLEEAFNRIEKM 382 (384)
T ss_pred ---------------CHHHHHHHHHHhCCEEEcCchhhccCCCCeEEEEec---CCHHHHHHHHHHHHhh
Confidence 1234555554 4576544333322 3579999984 3677888888877654
No 153
>PRK09265 aminotransferase AlaT; Validated
Probab=99.76 E-value=6e-16 Score=160.30 Aligned_cols=313 Identities=11% Similarity=0.036 Sum_probs=191.1
Q ss_pred cccccChhhHHHHHHHHHHHHHHc--CCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCC
Q 048643 122 FNWISSPAATELENIVMDWLGQML--KLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQ 199 (506)
Q Consensus 122 ~~~~~~p~~~~lE~~~~~~la~l~--g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~ 199 (506)
..|....+...+.+.+.+|+.... +++.+ ..++|+|+++++..++.+... ++..|+++..
T Consensus 66 ~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~-------~i~~t~G~~~~l~~~~~~~~~-----------~gd~Vlv~~p 127 (404)
T PRK09265 66 QGYSDSKGLFSARKAIMQYYQQKGIPDVDVD-------DIYIGNGVSELIVMAMQALLN-----------NGDEVLVPAP 127 (404)
T ss_pred CCCCCCCCcHHHHHHHHHHHhccCCCCCCcc-------cEEEeCChHHHHHHHHHHhCC-----------CCCEEEEeCC
Confidence 345544455778888888876432 33332 678899888887666654422 5567888999
Q ss_pred CchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC---hhHHHHHHH
Q 048643 200 THCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP---LKPLCDVAK 276 (506)
Q Consensus 200 ~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp---l~~I~~ia~ 276 (506)
+|..+..+++..|. +++.++++.++++.+|+++|++++.+. +.+|+++.++|+||.+-+ +++|+++|+
T Consensus 128 ~y~~~~~~~~~~g~---~~v~~~~~~~~~~~~d~~~l~~~~~~~------~~~v~l~~P~NPtG~~~~~~~~~~i~~~a~ 198 (404)
T PRK09265 128 DYPLWTAAVSLSGG---KPVHYLCDEEAGWFPDLDDIRSKITPR------TKAIVIINPNNPTGAVYSKELLEEIVEIAR 198 (404)
T ss_pred CCcChHHHHHHcCC---EEEEEecccccCCCCCHHHHHHhcccc------ceEEEEECCCCCCCcCCCHHHHHHHHHHHH
Confidence 99999999998898 888888875445789999999988643 337888889999999977 899999999
Q ss_pred HhCCEEEeecccccccccCccchhhhcCCCCCCeeE-EcCccccCCC-CcceEEEEe-Cchh---HHhhhcCCccccCCc
Q 048643 277 QFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFS-LNAHKWFFTT-LDCCCLWVK-DPSA---LVSSLSTNPEYLKNK 350 (506)
Q Consensus 277 ~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~-~~~hK~l~~p-~~~g~~~~r-~~~~---l~~~~~~~~~yl~~~ 350 (506)
++|+++++|.+|+....-.........-......++ .++.|.++.| .-+|+++.. +... +.+.+... .+..
T Consensus 199 ~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~~~~~~~~~~-~~~~-- 275 (404)
T PRK09265 199 QHNLIIFADEIYDKILYDGAVHISIASLAPDLLCVTFNGLSKAYRVAGFRVGWMVLSGPKKHAKGYIEGLDML-ASMR-- 275 (404)
T ss_pred HCCCEEEEehhhhhccCCCCCcCCHHHcCCCceEEEEecchhhccCcccceEEEEEeCchHHHHHHHHHHHHH-hccc--
Confidence 999999999999754321111111111011223444 4468999654 668888764 3321 11111100 0000
Q ss_pred cccCCCccCCCCccccCCCCCCchHHHHHHHHhch-hHHHHHH---HHHHHHHHHHHHHHHcCCCCc---c--ceEEE-e
Q 048643 351 ATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGV-ANLRHFL---RSHVNMAKLFERLVASDKRVS---P--SAVMD-K 420 (506)
Q Consensus 351 ~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~-~g~~~~i---~~~~~~a~~l~~~l~~~~~~~---p--~~v~f-~ 420 (506)
. + ...+...++...++. +.+.+++ ++..+.++.+.+.|++.++++ | +.+.| +
T Consensus 276 --------------~-~---~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~p~~g~~l~~~ 337 (404)
T PRK09265 276 --------------L-C---ANVPAQHAIQTALGGYQSINELILPGGRLYEQRDRAWELLNAIPGVSCVKPKGALYAFPK 337 (404)
T ss_pred --------------c-C---CCcHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCcceEEEEE
Confidence 0 0 011222333333321 2222322 355666788888888877776 4 33333 4
Q ss_pred ecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeE--CCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 048643 421 LKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVC--GGIYAMRFAVGATLTEERHVMVAWTMVQEQLEA 497 (506)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~--~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~ 497 (506)
+.+... + .....+.+.+.+.+.|+.+..+..+ .+..++|+++. .+++++++.++.|.++.+.
T Consensus 338 ~~~~~~-------~-----~~~~~~~~~~~l~~~gv~v~pg~~F~~~~~~~~Ri~~~---~~~e~l~~~l~rl~~~l~~ 401 (404)
T PRK09265 338 LDPKVY-------P-----IHDDEQFVLDLLLQEKVLLVQGTGFNWPEPDHFRIVTL---PRVDDLEEAIGRIGRFLSG 401 (404)
T ss_pred eccccc-------C-----CCCHHHHHHHHHHhCCEEEECchhhCCCCCCeEEEEeC---CCHHHHHHHHHHHHHHHHH
Confidence 432100 0 0001234555666778754443333 23578999994 4688999999999887653
No 154
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.76 E-value=8.3e-16 Score=161.54 Aligned_cols=321 Identities=11% Similarity=0.093 Sum_probs=204.7
Q ss_pred cccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchH
Q 048643 124 WISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCA 203 (506)
Q Consensus 124 ~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s 203 (506)
|....+...+.+.+.+|+.+.+|.+... .....++|+|+++++...+.+..+ ++..|+++...+..
T Consensus 82 Y~~~~G~~~LR~aiA~~l~~~~~~~~~v---~~~~Iiit~Ga~~al~~l~~~l~~-----------pGd~Vlv~~P~Y~~ 147 (468)
T PLN02450 82 FQDYHGLPAFKNALAEFMSEIRGNKVTF---DPNKLVLTAGATSANETLMFCLAE-----------PGDAFLLPTPYYPG 147 (468)
T ss_pred CCCCCChHHHHHHHHHHHHHhhCCCCCc---ChHHeEEccChHHHHHHHHHHhCC-----------CCCEEEECCCCCCc
Confidence 3333355679999999999887743210 012688999988887666655433 67788899999988
Q ss_pred HHHHHH-HhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC---hhHHHHHHHHhC
Q 048643 204 LQKAAQ-IVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP---LKPLCDVAKQFG 279 (506)
Q Consensus 204 ~~ka~~-~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp---l~~I~~ia~~~g 279 (506)
+...+. ..|. +++.||++.++++.+|++.|++++++..+.+.++.+|+++.++|+||.+-+ +++|+++|++|+
T Consensus 148 ~~~~~~~~~g~---~~v~v~~~~~~~~~~~~~~le~~~~~~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~ 224 (468)
T PLN02450 148 FDRDLKWRTGV---EIVPIHCSSSNGFQITESALEEAYQQAQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKN 224 (468)
T ss_pred hHHHHhhcCCc---EEEEEecCCccCCcCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCC
Confidence 888777 4788 999999875556889999999999876666666777888899999999955 677888899999
Q ss_pred CEEEeecccccccccCccchhhhc--------CCCCC--CeeEEcCccccC-CCCcceEEEEeCchhHHhhhcCCccccC
Q 048643 280 IWVHVDAAYAGSACICPEFQHFID--------GVEGA--DSFSLNAHKWFF-TTLDCCCLWVKDPSALVSSLSTNPEYLK 348 (506)
Q Consensus 280 ~~lhVDaA~gg~~~~~~~~~~~~~--------gi~~a--Dsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~ 348 (506)
+|+++|.+|+....-.+.+...+. +.... -.+..++.|.++ ..+-+|+++..+.... +.+.....|..
T Consensus 225 ~~iI~DE~Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~li~~~~~l~-~~~~~~~~~~~ 303 (468)
T PLN02450 225 IHLISDEIYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDLGLPGFRVGAIYSNDEMVV-SAATKMSSFGL 303 (468)
T ss_pred cEEEEEccccccccCCCCcccHHHHhhhcccccCCCCCcEEEEEeccccCCCCCccEEEEEECCHHHH-HHHHHHhhcCC
Confidence 999999999865432211111111 00001 134667899997 6688999887654322 23321111110
Q ss_pred CccccCCCccCCCCccccCCCCCCchHHHHHHHHhch-----hHHHHHHHHHHHHHHHHHHHHHcCCCCc---c--c-eE
Q 048643 349 NKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGV-----ANLRHFLRSHVNMAKLFERLVASDKRVS---P--S-AV 417 (506)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~-----~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p--~-~v 417 (506)
. ..+...++...+.. ..+++..++..+..+.+.+.|++. ++. | + .+
T Consensus 304 ------------------~----s~~~Q~a~~~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~L~~~-gi~~~~~~~g~fl 360 (468)
T PLN02450 304 ------------------V----SSQTQYLLSALLSDKKFTKNYLEENQKRLKQRQKKLVSGLEAA-GIKCLKSNAGLFC 360 (468)
T ss_pred ------------------C----CHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHc-CCcccCCCceEEE
Confidence 0 11222223333322 235667777888888889999887 666 4 4 34
Q ss_pred EEeecCCCcccccccccchHHHHHHHHHHHHHHHHh-cCcEEEeeee-EC--CEEEEEEEecCCCCCHHHHHHHHHHHHH
Q 048643 418 MDKLKPKYENCHSQQLVTEEEAINEFNRELLESINA-SGKAYMTHAV-CG--GIYAMRFAVGATLTEERHVMVAWTMVQE 493 (506)
Q Consensus 418 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~-~~--g~~~lR~~~~~~~tt~edi~~li~~l~~ 493 (506)
.+++.... .... .....++.+.+.+ .|+. +.++. +. +.+++|+++++ .++++++..++.|++
T Consensus 361 wi~l~~~~----------~~~~-~~~~~~l~~~ll~~~gV~-v~PG~~f~~~~~g~~Rl~f~~--~~~~~l~~~l~ri~~ 426 (468)
T PLN02450 361 WVDMRHLL----------KSNT-FEAEMELWKKIVYEVKLN-ISPGSSCHCTEPGWFRVCFAN--MSEETLDLAMKRLKS 426 (468)
T ss_pred EEEchHhc----------CcCC-chHHHHHHHHHHHhCCEE-EeCccccCCCCCCEEEEEecC--CCHHHHHHHHHHHHH
Confidence 44442210 0000 0112345566654 5664 44443 32 35799999964 356799999999988
Q ss_pred HHHHHH
Q 048643 494 QLEAFL 499 (506)
Q Consensus 494 ~~~~l~ 499 (506)
+.++..
T Consensus 427 ~l~~~~ 432 (468)
T PLN02450 427 FVESDS 432 (468)
T ss_pred HHHhcc
Confidence 876554
No 155
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.76 E-value=1.8e-16 Score=162.04 Aligned_cols=211 Identities=16% Similarity=0.195 Sum_probs=149.0
Q ss_pred HHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHH----HHHHh
Q 048643 136 IVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQK----AAQIV 211 (506)
Q Consensus 136 ~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~k----a~~~~ 211 (506)
++.+.+++++|.+ ..+++++|+.|+..++. . ++ ++..|+++...|.+..+ .+...
T Consensus 51 ~le~~la~l~g~~---------~~l~~~sG~~al~~~l~-l----l~-------~Gd~Vl~~~~~y~~~~~~~~~~~~~~ 109 (378)
T TIGR01329 51 ALESLLAKLDKAD---------RAFAFSSGMAALDVITR-L----LN-------NGDEIIAGDDLYGGTDRLLTQVVPRS 109 (378)
T ss_pred HHHHHHHHHhCCC---------cEEEECCHHHHHHHHHH-H----hC-------CCCEEEEcCCCchHHHHHHHHHHHHc
Confidence 4446688888874 45777777766543322 1 11 55678888888877654 34557
Q ss_pred CCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecccccc
Q 048643 212 GIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGS 291 (506)
Q Consensus 212 G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~ 291 (506)
|+ +++.++.+ |++++++++++++ .+|+++.++|++|.+-|+++|+++|+++|++++||++|+.+
T Consensus 110 G~---~v~~vd~~-------d~~~le~~i~~~t------klv~le~psnptg~v~dl~~I~~la~~~g~~vivD~a~~~~ 173 (378)
T TIGR01329 110 GV---VVVHVDTT-------DLDKVKAALGPKT------KLVLLESPTNPLQKIVDIRKISEMAHAQNALVVVDNTMMSP 173 (378)
T ss_pred Cc---EEEEeCCC-------CHHHHHHhcCcCc------eEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCccc
Confidence 88 88888752 7899999887543 48999999999999999999999999999999999999665
Q ss_pred cccCccchhhhcCCCCCCeeEEcCccccCCCCc--ceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCccccCCC
Q 048643 292 ACICPEFQHFIDGVEGADSFSLNAHKWFFTTLD--CCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSR 369 (506)
Q Consensus 292 ~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr 369 (506)
....+ .. . ++|.+..++|||++.|.+ .|+++++++....+ +. .+... .+.
T Consensus 174 ~~~~~-l~-----~-g~Di~v~S~tK~l~G~~~~~~G~v~~~~~~~~~~-~~---~~~~~-----------------~G~ 225 (378)
T TIGR01329 174 LLCNP-LE-----L-GADIVYHSATKFLAGHSDVMAGVLAVKGEEIAKK-VY---FLQNS-----------------TGS 225 (378)
T ss_pred ccCCh-hh-----c-CCcEEEEecceeccCCccceeEEEEeCcHHHHHH-HH---HHHHh-----------------cCC
Confidence 43222 11 1 789999999999998876 88888877543222 11 01000 011
Q ss_pred CCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc
Q 048643 370 RFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS 413 (506)
Q Consensus 370 ~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~ 413 (506)
...+...|..++ |.+.+..++++..+++..+.+.|+++|.++
T Consensus 226 ~~~~~~a~l~~~--~l~tl~~R~e~~~~na~~la~~L~~~~~v~ 267 (378)
T TIGR01329 226 GLAPFDCWLLLR--GIKTLAIRIEKQQENARAIAMFLSTHPRVK 267 (378)
T ss_pred cCCHHHHHHHHc--cCCCHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 122334455544 567888899999999999999999887654
No 156
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.76 E-value=1.1e-16 Score=163.70 Aligned_cols=218 Identities=18% Similarity=0.210 Sum_probs=155.6
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHH
Q 048643 126 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQ 205 (506)
Q Consensus 126 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 205 (506)
..|...++|+. +++++|.+ ..+++++|++|+..++.+... ++..|+++...|.+..
T Consensus 38 ~~p~~~~le~~----la~l~g~~---------~a~~~~sG~~Ai~~~l~~l~~-----------~gd~Vl~~~~~y~~~~ 93 (369)
T cd00614 38 GNPTVDALEKK----LAALEGGE---------AALAFSSGMAAISTVLLALLK-----------AGDHVVASDDLYGGTY 93 (369)
T ss_pred CChhHHHHHHH----HHHHHCCC---------CEEEEcCHHHHHHHHHHHHcC-----------CCCEEEECCCCcchHH
Confidence 56777777765 66666654 458888899999888876543 5567888888887655
Q ss_pred H----HHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCE
Q 048643 206 K----AAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIW 281 (506)
Q Consensus 206 k----a~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~ 281 (506)
. .+...|+ +++.++.+ |++++++++++. +.+|++..++|++|.+.|+++|+++|++||++
T Consensus 94 ~~~~~~~~~~g~---~~~~v~~~-------d~~~l~~~i~~~------~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~ 157 (369)
T cd00614 94 RLFERLLPKLGI---EVTFVDPD-------DPEALEAAIKPE------TKLVYVESPTNPTLKVVDIEAIAELAHEHGAL 157 (369)
T ss_pred HHHHHHHhhcCe---EEEEeCCC-------CHHHHHHhcCCC------CeEEEEECCCCCCCeecCHHHHHHHHHHcCCE
Confidence 4 3456677 78887753 588898888653 34788899999999999999999999999999
Q ss_pred EEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCc--ceEEEEeCchhHHhhhcCCccccCCccccCCCccC
Q 048643 282 VHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLD--CCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVD 359 (506)
Q Consensus 282 lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 359 (506)
++||++|+.+....+ .. .++|.++.+.+|+++.+.+ .|+++.++++.. +.+.....++
T Consensus 158 livD~t~~~~~~~~~-~~------~g~Divv~S~tK~l~g~~~~~gG~v~~~~~~l~-~~l~~~~~~~------------ 217 (369)
T cd00614 158 LVVDNTFATPYLQRP-LE------LGADIVVHSATKYIGGHSDVIAGVVVGSGEALI-QRLRFLRLAL------------ 217 (369)
T ss_pred EEEECCCcchhcCCh-hh------hCCcEEEeccceeccCCCCceEEEEEeCcHHHH-HHHHHHHHhh------------
Confidence 999999987654221 11 1689999999999987643 677776653332 2221110111
Q ss_pred CCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc
Q 048643 360 YKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS 413 (506)
Q Consensus 360 ~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~ 413 (506)
+-...+...|+.++.+ +.+..++++..++++++.+.|+++|+++
T Consensus 218 --------g~~~~p~~a~~~l~~l--~tl~~r~~~~~~na~~la~~L~~~~~v~ 261 (369)
T cd00614 218 --------GTILSPFDAWLLLRGL--KTLPLRMERHSENALKVAEFLEKHPKVE 261 (369)
T ss_pred --------CCCCCHHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHcCCCcc
Confidence 1112345667776654 5677789999999999999999887543
No 157
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.76 E-value=2.6e-16 Score=163.06 Aligned_cols=240 Identities=16% Similarity=0.183 Sum_probs=159.3
Q ss_pred ccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchH-
Q 048643 125 ISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCA- 203 (506)
Q Consensus 125 ~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s- 203 (506)
...|....+|+. ++++.|.+ ..+++++|+.|+..++..... ++..|+++...|..
T Consensus 61 ~~~p~~~~Le~~----lA~leg~~---------~al~~~sG~~Ai~~al~~ll~-----------~GD~Vlv~~~~y~~t 116 (431)
T PRK08248 61 IMNPTTDVFEKR----IAALEGGI---------GALAVSSGQAAITYSILNIAS-----------AGDEIVSSSSLYGGT 116 (431)
T ss_pred CCCchHHHHHHH----HHHHhCCC---------cEEEECCHHHHHHHHHHHHhC-----------CCCEEEEccCchhhH
Confidence 345666666654 77777753 568999999998877765432 55677788777753
Q ss_pred ---HHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCC
Q 048643 204 ---LQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGI 280 (506)
Q Consensus 204 ---~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~ 280 (506)
+.+.++..|+ +++.|+. .|+++|+++|++.+ .+|+++.++|++|.+-|+++|+++|+++|+
T Consensus 117 ~~~~~~~~~~~Gv---~v~~vd~-------~d~e~l~~ai~~~t------klV~l~sp~NPtG~v~di~~I~~la~~~gi 180 (431)
T PRK08248 117 YNLFAHTLPKLGI---TVKFVDP-------SDPENFEAAITDKT------KALFAETIGNPKGDVLDIEAVAAIAHEHGI 180 (431)
T ss_pred HHHHHHHHHhCCE---EEEEECC-------CCHHHHHHhcCCCC------eEEEEECCCCCCCcccCHHHHHHHHHHcCC
Confidence 3345667788 8888874 37899999886543 378888999999999999999999999999
Q ss_pred EEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCc-ceEEEEeCchh-HHh--h---h-cCCccccCCccc
Q 048643 281 WVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLD-CCCLWVKDPSA-LVS--S---L-STNPEYLKNKAT 352 (506)
Q Consensus 281 ~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~-~g~~~~r~~~~-l~~--~---~-~~~~~yl~~~~~ 352 (506)
+++||++|+......| .. -++|.++.+.|||++.|-. .|.+++..... ... . + ...+.|......
T Consensus 181 ~vIvD~t~a~~~~~~p-l~------~gaDivv~S~tK~lgg~g~~~Gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (431)
T PRK08248 181 PLIVDNTFASPYLLRP-IE------HGADIVVHSATKFIGGHGTSIGGVIVDSGKFDWKGSGKFPGLTEPDPSYHGLVYT 253 (431)
T ss_pred EEEEeCCCCccccCCh-hH------cCCCEEEEcCccccCCCCCceEEEEEeCCccccccccccccccCCccccccchhh
Confidence 9999999975443322 11 1799999999999998753 56666643321 100 0 0 000111000000
Q ss_pred cCCCccC-----CCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc
Q 048643 353 ESKQVVD-----YKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS 413 (506)
Q Consensus 353 ~~~~~~~-----~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~ 413 (506)
+..+... ...+....+....+...|+.++ |.+-+..+++++.++|..+++.|+++|+++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~G~~l~p~~a~l~~r--gl~tl~~R~~~~~~nA~~la~~L~~~p~v~ 317 (431)
T PRK08248 254 DAVGEAAYITKARVQLLRDLGAALSPFNSFLLLQ--GLETLHLRMERHSENALAVAKFLEEHEAVE 317 (431)
T ss_pred hhhchhhHHHHHHHHHHHhcCCCCCHHHHHHHhc--CcCcHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 0000000 0000111233455667777666 667888999999999999999999998876
No 158
>PRK08068 transaminase; Reviewed
Probab=99.76 E-value=1.1e-15 Score=157.50 Aligned_cols=316 Identities=10% Similarity=0.004 Sum_probs=197.5
Q ss_pred HHHHHHhhcCCC-CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCC-cEEEcCCchHHHHHHHHHHHHHHHHhhcc
Q 048643 109 LGEMLSSGFNVV-GFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNG-GGVIQGTTCEAILCTLTAARDRVLNKIGR 186 (506)
Q Consensus 109 ~~~~l~~~~n~~-~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~-~g~~t~ggt~a~l~al~~ar~~~~~~~~~ 186 (506)
+.+.+...++.. ...|...++..++.+++.+|+.+.+|.+.+. . ..++|+|+++++..++.+...
T Consensus 50 ~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~g~~~~~-----~~~i~it~G~~~~l~~~~~~~~~-------- 116 (389)
T PRK08068 50 IVEALQEAAENPANHKYSPFRGYPFLKEAAADFYKREYGVTLDP-----ETEVAILFGGKAGLVELPQCLMN-------- 116 (389)
T ss_pred HHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC-----CccEEEcCCcHHHHHHHHHHhCC--------
Confidence 344554444432 2345555677899999999998888865432 2 468889988887665444322
Q ss_pred cCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCccc
Q 048643 187 ENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVD 266 (506)
Q Consensus 187 ~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~id 266 (506)
++..|+++..++.....+++..|+ +++.+|+++++++.+|+++|++++.+. +.+|+.+.++|+||.+-
T Consensus 117 ---~gd~vlv~~P~y~~~~~~~~~~g~---~~~~i~~~~~~~~~~d~~~l~~~~~~~------~~~v~l~~P~NPTG~~~ 184 (389)
T PRK08068 117 ---PGDTILVPDPGYPDYLSGVALARA---QFETMPLIAENNFLPDYTKIPEEVAEK------AKLMYLNYPNNPTGAVA 184 (389)
T ss_pred ---CCCEEEEcCCCCcchHHHHHhcCC---EEEEeecccccCCCCCHHHHHHhcccc------ceEEEEECCCCCCCCcC
Confidence 566788899999999999999999 999999975445789999999888643 33777788999999996
Q ss_pred C---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCC--CCCCeeEEcCccccC-CCCcceEEEEeCchhHHhhh
Q 048643 267 P---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGV--EGADSFSLNAHKWFF-TTLDCCCLWVKDPSALVSSL 340 (506)
Q Consensus 267 p---l~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi--~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~ 340 (506)
+ +++|+++|++|++++++|.+|+....-.......+... ..-..+..++.|.++ ...-+|+++. ++.. ...+
T Consensus 185 s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~-~~~l-~~~l 262 (389)
T PRK08068 185 TKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIELYTLSKTFNMAGWRVAFAVG-NESV-IEAI 262 (389)
T ss_pred CHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCccCCEEEEecchhccCCccceeEeEec-CHHH-HHHH
Confidence 6 56888899999999999999965432110111111111 112245567889996 4466888764 3333 2333
Q ss_pred cCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHh--chhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c-
Q 048643 341 STNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNY--GVANLRHFLRSHVNMAKLFERLVASDKRVS---P- 414 (506)
Q Consensus 341 ~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p- 414 (506)
.....++. .+- .+....++...+ +.+.++++.++..+..+++.+.|++. ++. |
T Consensus 263 ~~~~~~~~------------------~~~--~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~-g~~~~~~~ 321 (389)
T PRK08068 263 NLLQDHLF------------------VSL--FGAIQDAAIEALLSDQSCVAELVARYESRRNAFISACREI-GWEVDAPK 321 (389)
T ss_pred HHHHhhcc------------------CCC--ChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CCcccCCC
Confidence 21111110 000 011112222222 34566778888888899999999887 666 4
Q ss_pred -ce-EEEeecCCCcccccccccchHHHHHHHHHHHHHHHHh-cCcEEEeeee-E--CCEEEEEEEecCCCCCHHHHHHHH
Q 048643 415 -SA-VMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINA-SGKAYMTHAV-C--GGIYAMRFAVGATLTEERHVMVAW 488 (506)
Q Consensus 415 -~~-v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~-~--~g~~~lR~~~~~~~tt~edi~~li 488 (506)
+. +.+++.+. ....++.+.+.+ .|+. +.++. + .+..++|+++.. .++.+...+
T Consensus 322 g~~~~~v~~~~~-----------------~~~~~~~~~l~~~~gi~-v~pg~~f~~~~~~~iRi~~~~---~~~~l~~al 380 (389)
T PRK08068 322 GSFFAWMPVPKG-----------------YTSEQFADLLLEKAHVA-VAPGNGFGEHGEGYVRVGLLT---DEERLREAV 380 (389)
T ss_pred eeEEEEEECCCC-----------------CCHHHHHHHHHHhCCEE-EecchHhCccCCCeEEEEEcC---CHHHHHHHH
Confidence 33 34454321 012456677765 4764 44432 2 235699999953 445555555
Q ss_pred HHHHH
Q 048643 489 TMVQE 493 (506)
Q Consensus 489 ~~l~~ 493 (506)
+.|.+
T Consensus 381 ~~l~~ 385 (389)
T PRK08068 381 ERIGK 385 (389)
T ss_pred HHHHH
Confidence 55543
No 159
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.76 E-value=2.6e-16 Score=160.17 Aligned_cols=219 Identities=12% Similarity=0.111 Sum_probs=160.4
Q ss_pred cccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchH
Q 048643 124 WISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCA 203 (506)
Q Consensus 124 ~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s 203 (506)
....|....+|+. ++.+-|.. .++++++|+.|+.+++.+... ++..|+++...|..
T Consensus 58 R~~nPt~~~le~~----la~LEg~~---------~a~~~~SGmaAi~~~~~~ll~-----------~GD~Vv~~~~~Yg~ 113 (395)
T PRK08114 58 RRGTLTHFSLQEA----MCELEGGA---------GCALYPCGAAAVANAILAFVE-----------QGDHVLMTGTAYEP 113 (395)
T ss_pred CCCChhHHHHHHH----HHHHhCCC---------eEEEEhHHHHHHHHHHHHHcC-----------CCCEEEEeCCCcHH
Confidence 3466777888866 56665543 567888899888777665422 56678888888876
Q ss_pred HHHHH----HHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhC
Q 048643 204 LQKAA----QIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFG 279 (506)
Q Consensus 204 ~~ka~----~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g 279 (506)
..+.+ +..|+ +++.++. .|.+.++++|+++++ +|.+..++|++|.+-||++|+++||++|
T Consensus 114 t~~l~~~~l~~~Gi---~v~~vd~-------~d~~~l~~~l~~~Tr------lV~~EtpsNp~~~v~DI~~Ia~ia~~~g 177 (395)
T PRK08114 114 TQDFCSKILSKLGV---TTTWFDP-------LIGADIAKLIQPNTK------VVFLESPGSITMEVHDVPAIVAAVRSVN 177 (395)
T ss_pred HHHHHHHHHHhcCc---EEEEECC-------CCHHHHHHhcCCCce------EEEEECCCCCCCEeecHHHHHHHHHHhC
Confidence 66554 45688 8888763 367889999876543 8999999999999999999999999985
Q ss_pred --CEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCC--cceEEEEeCchhHHhhhcCCccccCCccccCC
Q 048643 280 --IWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTL--DCCCLWVKDPSALVSSLSTNPEYLKNKATESK 355 (506)
Q Consensus 280 --~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~--~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~ 355 (506)
+.++||++|+.+.. ++-.+. +||.+..+.|||++.+- .+|+++.+ ++... .+... .+
T Consensus 178 ~g~~lvVDnT~a~p~~-~~pl~~------GaDivv~S~tKyl~Ghsdv~~G~v~~~-~~~~~-~l~~~-~~--------- 238 (395)
T PRK08114 178 PDAVIMIDNTWAAGVL-FKALDF------GIDISIQAGTKYLVGHSDAMIGTAVAN-ARCWE-QLREN-SY--------- 238 (395)
T ss_pred CCCEEEEECCCccccc-cCHHHc------CCcEEEEcCcccccCCCcceeEEEEcC-HHHHH-HHHHH-HH---------
Confidence 99999999988766 332222 89999999999999884 67755543 32221 11100 00
Q ss_pred CccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc
Q 048643 356 QVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS 413 (506)
Q Consensus 356 ~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~ 413 (506)
..+.-..+...|+.+| |.+-+.-+++++.++|..+++.|+++|.++
T Consensus 239 ----------~~G~~~~p~~a~l~~r--gl~TL~lR~~~~~~na~~va~~L~~hp~V~ 284 (395)
T PRK08114 239 ----------LMGQMVDADTAYMTSR--GLRTLGVRLRQHEESSLKVAEWLAEHPEVA 284 (395)
T ss_pred ----------hccCCCCHHHHHHHHc--CCCcHHHHHHHHHHHHHHHHHHHHcCCCEe
Confidence 1122335667787776 667888899999999999999999988765
No 160
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.75 E-value=1.5e-15 Score=154.44 Aligned_cols=276 Identities=13% Similarity=0.063 Sum_probs=180.9
Q ss_pred HHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCe
Q 048643 139 DWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGIDLKNF 218 (506)
Q Consensus 139 ~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v 218 (506)
+.+++.++.+.+ ..++|+|+++++..++.+..+ ++..|+++..++..+...++..|. ++
T Consensus 66 ~~ia~~~~~~~~-------~i~it~G~~~~l~~~~~~l~~-----------~gd~Vlv~~p~y~~~~~~~~~~g~---~~ 124 (351)
T PRK14807 66 EELARYCSVVPT-------NIFVGNGSDEIIHLIMLAFIN-----------KGDVVIYPHPSFAMYSVYSKIAGA---VE 124 (351)
T ss_pred HHHHHHhCCCcc-------cEEEecCHHHHHHHHHHHhcC-----------CCCEEEEeCCChHHHHHHHHHcCC---eE
Confidence 445555677654 678899888877665554322 556777888888888888899999 99
Q ss_pred EEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecccccccccCccc
Q 048643 219 RAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEF 298 (506)
Q Consensus 219 ~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~ 298 (506)
+.++.++ ++.+|++.|++++++. .+.+|+++.++|+||.+-+.+++.++|++++.++++|++|+.+. ....
T Consensus 125 ~~v~~~~--~~~~d~~~l~~~~~~~-----~~k~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~ivDe~y~~~~--~~~~ 195 (351)
T PRK14807 125 IPVKLKE--DYTYDVGSFIKVIEKY-----QPKLVFLCNPNNPTGSVIEREDIIKIIEKSRGIVVVDEAYFEFY--GNTI 195 (351)
T ss_pred EEeecCC--CCCCCHHHHHHHhhcc-----CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEeCcchhhc--ccch
Confidence 9999874 4789999999998642 13367778899999999999999999999899999999996542 1111
Q ss_pred hhhhcCCCCCCeeEEcCccccC-CCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCccccCCCCCCchHHH
Q 048643 299 QHFIDGVEGADSFSLNAHKWFF-TTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLW 377 (506)
Q Consensus 299 ~~~~~gi~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~ 377 (506)
...+... .-..+..++.|.++ ....+|+++. ++.. .+.+...... +. ...+.-.
T Consensus 196 ~~~~~~~-~~vi~~~S~SK~~~~~GlRiG~~v~-~~~~-~~~~~~~~~~----------------~~------~~~~~q~ 250 (351)
T PRK14807 196 VDVINEF-ENLIVLRTLSKAFGLAGLRVGYAVA-NENI-LKYLNLVKSP----------------YN------INSLSQV 250 (351)
T ss_pred HHHhhhC-CCEEEEecchHhcccchhceeeeec-CHHH-HHHHHHccCC----------------CC------cCHHHHH
Confidence 1112111 11244566889997 4467888765 3332 2333211000 00 0122223
Q ss_pred HHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc--c---ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHH
Q 048643 378 LVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS--P---SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESIN 452 (506)
Q Consensus 378 ~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~--p---~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 452 (506)
++.+.+....+.+.+++..+..+++.+.|++.++++ | +.+.+++. . ..++.+.+.
T Consensus 251 ~~~~~l~~~~~~~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~~~i~~~-~-------------------~~~~~~~l~ 310 (351)
T PRK14807 251 IALKVLRTGVLKERVNYILNERERLIKELSKIPGIKVYPSKTNFILVKFK-D-------------------ADYVYQGLL 310 (351)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCcEECcCCccEEEEEcC-C-------------------HHHHHHHHH
Confidence 333333334567777777888888999998877776 3 43333332 1 245667777
Q ss_pred hcCcEEEeeee--ECCEEEEEEEecCCCCCHHHHHHHHHHHHHH
Q 048643 453 ASGKAYMTHAV--CGGIYAMRFAVGATLTEERHVMVAWTMVQEQ 494 (506)
Q Consensus 453 ~~g~~~~~~~~--~~g~~~lR~~~~~~~tt~edi~~li~~l~~~ 494 (506)
+.|+. +.+.. .....++|++++ +.++.++++++|+++
T Consensus 311 ~~gV~-v~~~~~~~~~~~~iRis~~----~~~~~~~l~~~l~~~ 349 (351)
T PRK14807 311 ERGIL-VRDFSKVEGLEGALRITVS----SCEANDYLINGLKEL 349 (351)
T ss_pred HCCEE-EEECCCCCCCCCeEEEEcC----CHHHHHHHHHHHHHh
Confidence 77864 43322 123568999985 456889999999875
No 161
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.75 E-value=3e-16 Score=161.52 Aligned_cols=218 Identities=19% Similarity=0.198 Sum_probs=152.1
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHH-
Q 048643 126 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCAL- 204 (506)
Q Consensus 126 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~- 204 (506)
..|....+| +.++++.|.+ ..+++++|++|+..++.+... ++..|+++...|...
T Consensus 58 ~~p~~~~Le----~~lA~l~g~~---------~~v~~~sG~~Ai~~~l~all~-----------pGD~Vvv~~p~Y~~t~ 113 (405)
T PRK08776 58 GNPTRDLLG----EALAELEGGA---------GGVITATGMGAINLVLNALLQ-----------PGDTLVVPHDAYGGSW 113 (405)
T ss_pred CChHHHHHH----HHHHHHhCCC---------ceEEEcCHHHHHHHHHHHHhC-----------CCCEEEEccCCchHHH
Confidence 444445555 5677887753 457888888777665554422 556677777777653
Q ss_pred ---HHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCE
Q 048643 205 ---QKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIW 281 (506)
Q Consensus 205 ---~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~ 281 (506)
...+...|+ +++.++. .|++.|++++++. +.+|+++.++|++|.+.|+++|+++|+++|++
T Consensus 114 ~~~~~~~~~~g~---~v~~v~~-------~d~~~l~~~i~~~------tklV~l~~P~NPtG~v~dl~~I~~la~~~gi~ 177 (405)
T PRK08776 114 RLFNALAKKGHF---ALITADL-------TDPRSLADALAQS------PKLVLIETPSNPLLRITDLRFVIEAAHKVGAL 177 (405)
T ss_pred HHHHHHHHhcCc---EEEEECC-------CCHHHHHHhcCcC------CeEEEEECCCCCCCccCCHHHHHHHHHHcCCE
Confidence 333444566 6666653 4788999888654 34788889999999999999999999999999
Q ss_pred EEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCc--ceEEEEeCchhHHhhhcCCccccCCccccCCCccC
Q 048643 282 VHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLD--CCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVD 359 (506)
Q Consensus 282 lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 359 (506)
++||++|+.+....+ .. -++|.+..++||+++.|-+ .|++++++++... .+.....+
T Consensus 178 vIvD~a~a~~~~~~p-l~------~gaDivv~S~tK~l~g~~~~~~G~vv~~~~~l~~-~l~~~~~~------------- 236 (405)
T PRK08776 178 TVVDNTFLSPALQKP-LE------FGADLVLHSTTKYINGHSDVVGGAVVARDAELHQ-QLVWWANA------------- 236 (405)
T ss_pred EEEECCCcccccCCc-cc------ccCCEEEecCceeecCCCCceEEEEEeCCHHHHH-HHHHHHHh-------------
Confidence 999999976543211 11 2789999999999998754 5777676654332 22110000
Q ss_pred CCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc
Q 048643 360 YKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS 413 (506)
Q Consensus 360 ~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~ 413 (506)
.+-...++..|+.++ |.+.+..++++..+++..+.+.|+++|.++
T Consensus 237 -------~g~~~s~~~a~l~~~--gl~tl~~r~~~~~~na~~la~~L~~~p~v~ 281 (405)
T PRK08776 237 -------LGLTGSPFDAFLTLR--GLRTLDARLRVHQENADAIAALLDGHAAVN 281 (405)
T ss_pred -------cCCCCCHHHHHHHHh--hhCcHHHHHHHHHHHHHHHHHHHHcCCCee
Confidence 011124567777775 668899999999999999999999987665
No 162
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.75 E-value=5.8e-16 Score=157.68 Aligned_cols=284 Identities=13% Similarity=0.101 Sum_probs=180.6
Q ss_pred HHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCC
Q 048643 135 NIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGID 214 (506)
Q Consensus 135 ~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g 214 (506)
..+++.+++.+|.+.+ ..++|+|+++++..++.+. . ++.+++ ....+..+...++..|.
T Consensus 58 ~~lr~~ia~~~~~~~~-------~i~it~Ga~~~l~~~~~~l-~-----------~g~viv-~~P~y~~~~~~~~~~g~- 116 (356)
T PRK08056 58 RHLHQALARHHQVPAS-------WILAGNGETESIFAVVSGL-K-----------PRRAMI-VTPGFAEYRRALQQVGC- 116 (356)
T ss_pred HHHHHHHHHHhCcChh-------hEEECCCHHHHHHHHHHHh-C-----------CCCEEE-eCCCcHHHHHHHHHcCC-
Confidence 3455667777788765 6888898888776555432 1 333333 34667777888899999
Q ss_pred CCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC---hhHHHHHHHHhCCEEEeecccccc
Q 048643 215 LKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGS 291 (506)
Q Consensus 215 ~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp---l~~I~~ia~~~g~~lhVDaA~gg~ 291 (506)
+++.+|.++++++.+| +++++++.+. +.+|+++.++|+||.+-+ +++|+++|+++++|+++|++|..+
T Consensus 117 --~~~~v~~~~~~~~~~~-~~~~~~~~~~------~k~v~l~~p~NPTG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~ 187 (356)
T PRK08056 117 --EIRRYSLREADGWQLT-DAILEALTPD------LDCLFLCTPNNPTGLLPERQLLQAIAERCKSLNIALILDEAFIDF 187 (356)
T ss_pred --eEEEEecccccCCCcc-HHHHHhccCC------CCEEEEeCCcCCCCCCCCHHHHHHHHHHHHhcCCEEEEecchhcc
Confidence 9999998754446666 3444555322 336778999999999987 888999999999999999999765
Q ss_pred cccCccchhhhcCCCCCCeeEEcCccccC-CCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCccccCCCC
Q 048643 292 ACICPEFQHFIDGVEGADSFSLNAHKWFF-TTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRR 370 (506)
Q Consensus 292 ~~~~~~~~~~~~gi~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~ 370 (506)
..-....-..+... .-..+..+++|+++ ....+|+++..++..+. .+...... ++
T Consensus 188 ~~~~~~~~~~~~~~-~~~i~~~S~SK~~~~~G~RiG~~v~~~~~~~~-~l~~~~~~----------------~~------ 243 (356)
T PRK08056 188 IPDETGFIPQLADN-PHLWVLRSLTKFYAIPGLRLGYLVNSDDAAVA-RMRRQQMP----------------WS------ 243 (356)
T ss_pred CCcchHHHHHhccC-CCEEEEEechhhccCcchhheeeecCCHHHHH-HHHHhCCC----------------Cc------
Confidence 32111111112222 24467788999999 55779998776544332 22210000 00
Q ss_pred CCchHHHHHHHHh-chhHHHHHHHHHHHHHHHHHHHHHcCCCCc--c---ceEEEeecCCCcccccccccchHHHHHHHH
Q 048643 371 FRSLKLWLVIRNY-GVANLRHFLRSHVNMAKLFERLVASDKRVS--P---SAVMDKLKPKYENCHSQQLVTEEEAINEFN 444 (506)
Q Consensus 371 ~~al~~~~~l~~~-G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~--p---~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (506)
...+...++...+ +.+..+++.++..+.++++.+.|++++++. | +.+.+++... .
T Consensus 244 ~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~-------------------~ 304 (356)
T PRK08056 244 INAFAALAGEVILQDRAYQQATWQWLAEEGARFYQALCALPLLTVWPGRANYLFLRCERP-------------------D 304 (356)
T ss_pred hhHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCCCCcEEEEEcCCC-------------------h
Confidence 0112223333333 334456667777888999999999887776 3 4444443221 1
Q ss_pred HHHHHHHHhcCcEEEeeeeECC--EEEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 048643 445 RELLESINASGKAYMTHAVCGG--IYAMRFAVGATLTEERHVMVAWTMVQEQL 495 (506)
Q Consensus 445 ~~l~~~l~~~g~~~~~~~~~~g--~~~lR~~~~~~~tt~edi~~li~~l~~~~ 495 (506)
.++.+.|.+.|+....+..+.+ ..++|+++. +.++.++++++|+++.
T Consensus 305 ~~~~~~l~~~gI~v~~~~~f~~~~~~~iRis~~----~~~~~~~l~~~l~~~~ 353 (356)
T PRK08056 305 IDLQRALLTQRILIRSCANYPGLDSRYYRVAIR----SAAENERLLAALRNVL 353 (356)
T ss_pred HHHHHHHHHCCeEEEECCCCCCCCCCEEEEEEc----CHHHHHHHHHHHHHHH
Confidence 3566777777875444333322 468999985 5678999999998764
No 163
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.75 E-value=5.7e-16 Score=159.14 Aligned_cols=315 Identities=14% Similarity=0.128 Sum_probs=191.2
Q ss_pred ccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHH
Q 048643 125 ISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCAL 204 (506)
Q Consensus 125 ~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~ 204 (506)
..+|...++|++ +++++|.+ ..+++++||+|+..++.+..-. ++..|+++..+|.+.
T Consensus 26 ~~g~~~~~le~~----la~~~g~~---------~~v~~~sgt~al~~~l~al~~~----------~Gd~Viv~~~~~~~~ 82 (380)
T TIGR03588 26 TQGPTVPAFEEA----LAEYVGAK---------YAVAFNSATSALHIACLALGVG----------PGDRVWTTPITFVAT 82 (380)
T ss_pred cCChhHHHHHHH----HHHHHCCC---------eEEEEcCHHHHHHHHHHHcCCC----------CCCEEEeCCcchHHH
Confidence 345666777766 55556654 3466678898887777654211 566789999999999
Q ss_pred HHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEe
Q 048643 205 QKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHV 284 (506)
Q Consensus 205 ~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhV 284 (506)
..++...|+ +++.++++++ ++.+|+++|++++++.. ...+.+|+.+ +.+|...|+++|+++|++||+++++
T Consensus 83 ~~~~~~~G~---~~~~~~~~~~-~~~~d~~~l~~~i~~~~--~~~t~~v~~~---~~~G~~~~~~~i~~l~~~~~~~lI~ 153 (380)
T TIGR03588 83 ANCALYCGA---KVDFVDIDPD-TGNIDEDALEKKLAAAK--GKLPKAIVPV---DFAGKSVDMQAIAALAKKHGLKIIE 153 (380)
T ss_pred HHHHHHcCC---EEEEEecCCC-cCCcCHHHHHHHhhccc--CCCceEEEEe---CCCCccCCHHHHHHHHHHcCCEEEE
Confidence 999999999 9999999753 57899999999997420 0123355554 3579999999999999999999999
Q ss_pred ecccccccccCccchhhhcCCCCCCeeEEcCc--cccCCCCcceEEEEeCchhHHhhh--cCCccccCCcccc--CCCcc
Q 048643 285 DAAYAGSACICPEFQHFIDGVEGADSFSLNAH--KWFFTTLDCCCLWVKDPSALVSSL--STNPEYLKNKATE--SKQVV 358 (506)
Q Consensus 285 DaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~h--K~l~~p~~~g~~~~r~~~~l~~~~--~~~~~yl~~~~~~--~~~~~ 358 (506)
|+||+.+..... +. +......|..++++| |++..+ ..|++++.++....+.- ... ......... .....
T Consensus 154 D~a~a~g~~~~~--~~-~g~~~~~d~~~~S~~~~K~~~~~-~GG~v~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~ 228 (380)
T TIGR03588 154 DASHALGAEYGG--KP-VGNCRYADATVFSFHPVKIITTA-EGGAVTTNDEELAERMRLLRSH-GITKDPLLFEKQDEGP 228 (380)
T ss_pred ECCCcccCccCC--Ee-CCCccccceEEEecCCCCccccc-CceEEEECCHHHHHHHHHHHHC-CCCCCcccccccccCc
Confidence 999986654221 11 111124599999988 899876 46667777665432211 110 000000000 00000
Q ss_pred CCCC-ccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c--------ceEEEeecCCCc
Q 048643 359 DYKD-WQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS---P--------SAVMDKLKPKYE 426 (506)
Q Consensus 359 ~~~~-~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p--------~~v~f~~~~~~~ 426 (506)
.... ..+...-+...+.....+. ..+.+.+++++..++++++.+.|..+|+++ + ...++++....
T Consensus 229 ~~~~~~~~g~n~~m~~l~aa~g~~--qL~~l~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~- 305 (380)
T TIGR03588 229 WYYEQQELGFNYRMTDIQAALGLS--QLKKLDRFVAKRREIAARYDRLLKDLPYFTPLTIPLGSKSAWHLYPILLDQEF- 305 (380)
T ss_pred ceeeeeccccccCccHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCEeEEEEEEEEECCcC-
Confidence 0000 0011111222222222222 245688899999999999999999987765 1 11222332110
Q ss_pred ccccccccchHHHHHHHHHHHHHHHHhcCcEEE---eeee----E----C----------CEEEEEEEecCCCCCHHHHH
Q 048643 427 NCHSQQLVTEEEAINEFNRELLESINASGKAYM---THAV----C----G----------GIYAMRFAVGATLTEERHVM 485 (506)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~---~~~~----~----~----------g~~~lR~~~~~~~tt~edi~ 485 (506)
.....++.+.|.+.|+..- .+.. + . ....+++-+ ++..+++||+
T Consensus 306 --------------~~~r~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~-~~~l~~~dv~ 370 (380)
T TIGR03588 306 --------------GCTRKEVFEALRAAGIGVQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLPL-HPALTLEQQQ 370 (380)
T ss_pred --------------CCCHHHHHHHHHHCCCCcccCCcccccChhhhccCCcCCCcHHHHHHhceEEcCC-CCCCCHHHHH
Confidence 0113456666766776311 1100 0 0 025677765 6788999999
Q ss_pred HHHHHHHHH
Q 048643 486 VAWTMVQEQ 494 (506)
Q Consensus 486 ~li~~l~~~ 494 (506)
.+++.|+++
T Consensus 371 ~i~~~l~~~ 379 (380)
T TIGR03588 371 RVVETLRKV 379 (380)
T ss_pred HHHHHHHHh
Confidence 999999875
No 164
>PRK10534 L-threonine aldolase; Provisional
Probab=99.75 E-value=2.7e-16 Score=158.68 Aligned_cols=291 Identities=14% Similarity=0.067 Sum_probs=174.7
Q ss_pred cccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCc
Q 048643 122 FNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTH 201 (506)
Q Consensus 122 ~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H 201 (506)
..|...|...++|+. +++++|.+. .++++||+++++.++.+... ++..|+++...|
T Consensus 28 ~~Y~~~~~~~~L~~~----la~~~g~~~---------~~v~~~g~~a~~~~l~~~~~-----------~gd~vi~~~~~~ 83 (333)
T PRK10534 28 DVYGDDPTVNALQDY----AAELSGKEA---------ALFLPTGTQANLVALLSHCE-----------RGEEYIVGQAAH 83 (333)
T ss_pred cccCCCHHHHHHHHH----HHHHhCCCe---------EEEeCchHHHHHHHHHHhcC-----------CCCeeEEechhh
Confidence 345567778888876 466677754 37888889999888776432 445566777788
Q ss_pred hHHHHH--HHHhC-CCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhH---HHHHH
Q 048643 202 CALQKA--AQIVG-IDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKP---LCDVA 275 (506)
Q Consensus 202 ~s~~ka--~~~~G-~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~---I~~ia 275 (506)
.+..++ +..+| . .++.++.+. ++.+|+++|++++.+....+..+.+|+++. +++|.+.|.++ |+++|
T Consensus 84 ~~~~~~~~~~~~~~~---~~~~~~~~~--~~~~d~~~l~~~i~~~~~~~~~~~lv~l~n--p~~G~v~~~~~l~~i~~~~ 156 (333)
T PRK10534 84 NYLYEAGGAAVLGSI---QPQPIDAAA--DGTLPLDKVAAKIKPDDIHFARTRLLSLEN--THNGKVLPREYLKQAWEFT 156 (333)
T ss_pred hhHhcCCchHHhcCc---eEEeecCCC--CCCCCHHHHHHhhcccCcCcccceEEEEec--CCCCeecCHHHHHHHHHHH
Confidence 644432 34444 4 667777653 589999999999865321111233555553 44699977654 56788
Q ss_pred HHhCCEEEeeccccccccc--CccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCcccc
Q 048643 276 KQFGIWVHVDAAYAGSACI--CPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATE 353 (506)
Q Consensus 276 ~~~g~~lhVDaA~gg~~~~--~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~ 353 (506)
++|++|++||+||...... ........ ...|.++++++|.++.+ .|..++.+++... .+.....+..
T Consensus 157 ~~~~~~lvvDEA~~~~~~~~~~~~~~~~~---~~~~~~~~s~SK~~~~~--~G~~~~~~~~~i~-~~~~~~~~~~----- 225 (333)
T PRK10534 157 RERNLALHVDGARIFNAVVAYGCELKEIT---QYCDSFTICLSKGLGTP--VGSLLVGNRDYIK-RARRWRKMTG----- 225 (333)
T ss_pred HHcCCeEEeeHHHHHHHHHHcCCCHHHHH---hcCCEEEEEeEcCCCCc--ccceEEcCHHHHH-HHHHHHHHhC-----
Confidence 9999999999997521110 11111111 24577778899988876 5644455555432 2211000000
Q ss_pred CCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c--ceEEEeecCCCccc
Q 048643 354 SKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS---P--SAVMDKLKPKYENC 428 (506)
Q Consensus 354 ~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p--~~v~f~~~~~~~~~ 428 (506)
.+-...++...+++..+ +...+.+++..+.++++.+.|++. +++ | +.+.+++.+.
T Consensus 226 -------------~~~~~~~~~~a~~~~~l--~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~~~~~nfv~~~~~~~---- 285 (333)
T PRK10534 226 -------------GGMRQAGILAAAGLYAL--KHNVARLQEDHDNAAWLAEQLREA-GADVMRQDTNMLFVRVGEE---- 285 (333)
T ss_pred -------------CchhhHHHHHHHHHHHH--HhhHHHHHHHHHHHHHHHHHHHhC-CCccCCCCceEEEEECCch----
Confidence 00001112222223322 112344455556678999999987 777 3 6666665321
Q ss_pred ccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 048643 429 HSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQL 495 (506)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~ 495 (506)
...++.+.|.++|+. +.+. ..+|++. +.+.|+++++++++.|+++.
T Consensus 286 --------------~~~~~~~~l~~~gi~-v~~~-----~~~rl~~-~~r~t~e~~~~~~~~l~~~~ 331 (333)
T PRK10534 286 --------------QAAALGEYMRERNVL-INAS-----PIVRLVT-HLDVSREQLAEVVAHWRAFL 331 (333)
T ss_pred --------------hHHHHHHHHHHcCee-ecCC-----ceEEEEE-EeCCCHHHHHHHHHHHHHHh
Confidence 134566777788874 4433 2589988 45678999999999998664
No 165
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.75 E-value=4.7e-16 Score=159.81 Aligned_cols=219 Identities=17% Similarity=0.167 Sum_probs=152.9
Q ss_pred ccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHH
Q 048643 125 ISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCAL 204 (506)
Q Consensus 125 ~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~ 204 (506)
...|...++|+ .++++.|.+ ..+++++|++|+..++.+... ++..|+++...|.+.
T Consensus 61 ~~~p~~~~le~----~lA~l~g~~---------~~i~~ssG~~Ai~~~l~all~-----------~GD~Vi~~~~~y~~~ 116 (398)
T PRK08249 61 NTNPTVQAFEE----KVRILEGAE---------AATAFSTGMAAISNTLYTFLK-----------PGDRVVSIKDTYGGT 116 (398)
T ss_pred CCChHHHHHHH----HHHHHhCCC---------eEEEeCChHHHHHHHHHHhcC-----------CCCEEEEcCCchHHH
Confidence 45566666665 477777754 357788888888776655432 566788888888765
Q ss_pred HH----HHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCC
Q 048643 205 QK----AAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGI 280 (506)
Q Consensus 205 ~k----a~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~ 280 (506)
.. .+...|+ +++.++ ..|++.++++|++.+ .+|++..++|++|.+-|+++|+++|+++|+
T Consensus 117 ~~~~~~~~~~~Gi---~v~~vd-------~~d~e~l~~~i~~~t------klV~ie~p~NPtg~v~dl~~I~~la~~~gi 180 (398)
T PRK08249 117 NKIFTEFLPRMGV---DVTLCE-------TGDHEQIEAEIAKGC------DLLYLETPTNPTLKIVDIERLAAAAKKVGA 180 (398)
T ss_pred HHHHHHHHhhCCe---EEEEcC-------CCCHHHHHHhcCCCC------eEEEEECCCCCCCccCCHHHHHHHHHHcCC
Confidence 43 3455677 666654 358999999987643 378888999999999999999999999999
Q ss_pred EEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCc-ceEEEEeCchhHHhhhcCCccccCCccccCCCccC
Q 048643 281 WVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLD-CCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVD 359 (506)
Q Consensus 281 ~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~-~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 359 (506)
+++||++|+.+....+ .. .++|.++.+++|+++.+-. .|.+++.+++... .+.....+
T Consensus 181 ~livD~t~a~~~~~~~-l~------~~~Divv~S~sK~l~g~~~~~gG~vv~~~~l~~-~l~~~~~~------------- 239 (398)
T PRK08249 181 LVVVDNTFATPINQNP-LA------LGADLVIHSATKFLSGHADALGGVVCGSKELME-QVYHYREI------------- 239 (398)
T ss_pred EEEEECCcCccccCCc-hh------hCCCEEeccCceecCCCCCceEEEEECCHHHHH-HHHHHHHh-------------
Confidence 9999999985543221 11 2789999999999987643 2334444544332 22100000
Q ss_pred CCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc
Q 048643 360 YKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS 413 (506)
Q Consensus 360 ~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~ 413 (506)
.+-.......|+.++ |.+.+..++++..++++.+.+.|+++|.++
T Consensus 240 -------~g~~~s~~~a~l~l~--~l~tL~~R~~~~~~na~~la~~L~~~p~v~ 284 (398)
T PRK08249 240 -------NGATMDPMSAYLILR--GMKTLKLRVRQQQESAMALAKYLQTHPKVE 284 (398)
T ss_pred -------cCCCCCHHHHHHHHh--CcchHHHHHHHHHHHHHHHHHHHHcCCCee
Confidence 111234556677766 567788899999999999999999887655
No 166
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.75 E-value=5.7e-16 Score=165.81 Aligned_cols=233 Identities=12% Similarity=0.093 Sum_probs=161.2
Q ss_pred HHHHHHHHhcCCCCCCCCCCccccCC---C--CCCHHHHHHHH-H-HhhcCCC-CcccccChhhHHHHHHHHHHHHHHcC
Q 048643 75 ILQDVQEHIVPGVTHWQSPNYFAYFP---S--SGSIAGFLGEM-L-SSGFNVV-GFNWISSPAATELENIVMDWLGQMLK 146 (506)
Q Consensus 75 il~~~~~~~~~~~~~~~~p~~~~~~~---~--~~~~~~~~~~~-l-~~~~n~~-~~~~~~~p~~~~lE~~~~~~la~l~g 146 (506)
+++.|.+....+...|+-|.+.|-.. + +..+....++- + ....+.. ....-..|.....|.+ +..|++||
T Consensus 111 ~~~aL~~y~~~~~~sfh~PGHkgG~~f~~~p~g~~f~~f~Gen~fr~Dlte~~~~LddL~~~eG~i~eAq--~~AA~~fg 188 (720)
T PRK13578 111 FFDTLTDYVEMGNSTFDCPGHQGGQFFRKHPAGRQFYDFFGENLFRADMCNADVKLGDLLIHEGAAKDAQ--KHAAKVFN 188 (720)
T ss_pred HHHHHHHHHhCCCceeeCCcCCCCCCCCcChhhhHHHHHhhhhhhhhhcccccccCCCCCCCChHHHHHH--HHHHHHhC
Confidence 45556666667778888887765211 1 11112223321 1 1122221 1222233444455554 88999999
Q ss_pred CCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHH-HHHhCCCCCCeEEEecCC
Q 048643 147 LPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKA-AQIVGIDLKNFRAIKTTK 225 (506)
Q Consensus 147 ~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka-~~~~G~g~~~v~~v~~~~ 225 (506)
.+.++ ++++|+|.+|..++.++.. ++..|++...+|-|+..+ +.+.|+ ..++++...
T Consensus 189 Ad~ty--------FlvNGTS~gn~a~i~a~~~-----------~Gd~VLvdRN~HKSv~hgaLiLsGa---~PVYl~P~~ 246 (720)
T PRK13578 189 ADKTY--------FVLNGTSASNKVVTNALLT-----------PGDLVLFDRNNHKSNHHGALIQAGA---TPVYLETAR 246 (720)
T ss_pred CCceE--------EEeCChhHHHHHHHHHhcC-----------CCCEEEeecccHHHHHHHHHHHcCC---eEEEeeccc
Confidence 99875 8899999999888877654 677899999999999996 889999 888887654
Q ss_pred CCC---cccCH-----HHHHHHHHHH-H--hcCCcc-EEEEEeccCCCCCcccChhHHHHH-HHHhCCEEEeeccccccc
Q 048643 226 SSS---YGLSP-----DSLLTQINLD-V--EAGLVP-LFLCATIGTTAITAVDPLKPLCDV-AKQFGIWVHVDAAYAGSA 292 (506)
Q Consensus 226 ~~~---~~~d~-----~~L~~~i~~~-~--~~g~~p-~~Vv~t~gtt~tG~idpl~~I~~i-a~~~g~~lhVDaA~gg~~ 292 (506)
+.- +.+++ +.++++|++. . ++..+| .+|++|.+ |..|.+-++++|+++ |+.++ .+|||.|||+.+
T Consensus 247 n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~p-TYdG~~ydi~~I~~~~~h~~~-~llvDEAhgah~ 324 (720)
T PRK13578 247 NPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLG-TYDGTIYNARQVVDKIGHLCD-YILFDSAWVGYE 324 (720)
T ss_pred cccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECC-CCcceeecHHHHHHHhhccCC-cEEEeCcchhhh
Confidence 221 24565 4488888765 1 122345 56677765 578999999999998 78888 999999999999
Q ss_pred ccCccchhhh--cCCCCCC----eeEEcCccccCCCCcceEEEEeCc
Q 048643 293 CICPEFQHFI--DGVEGAD----SFSLNAHKWFFTTLDCCCLWVKDP 333 (506)
Q Consensus 293 ~~~~~~~~~~--~gi~~aD----si~~~~hK~l~~p~~~g~~~~r~~ 333 (506)
.+.|.++.+- ..-.++| .++.+.||.|.+--.++++.+++.
T Consensus 325 ~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~alTQaS~LHvk~~ 371 (720)
T PRK13578 325 QFIPMMADCSPLLLELNENDPGIFVTQSVHKQQAGFSQTSQIHKKDN 371 (720)
T ss_pred ccCcccccCChhhhhcCCCCCCeEEEEChhhcchhhhhHhhhhcCCc
Confidence 8887644321 1123789 999999999998888999988763
No 167
>PLN02509 cystathionine beta-lyase
Probab=99.75 E-value=2.9e-16 Score=163.08 Aligned_cols=214 Identities=16% Similarity=0.219 Sum_probs=152.0
Q ss_pred HHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHH----H
Q 048643 133 LENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKA----A 208 (506)
Q Consensus 133 lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka----~ 208 (506)
..+++.++++++.|.+ ..+++++|+.++ .++.... + ++..|+++...|.+..+. +
T Consensus 134 t~~aLE~~lA~leg~e---------~ai~~~SG~aAi-~~il~ll----~-------~GD~VI~~~~~y~~t~~ll~~~l 192 (464)
T PLN02509 134 TRDALESLLAKLDKAD---------RAFCFTSGMAAL-SAVTHLI----K-------NGEEIVAGDDVYGGSDRLLSQVV 192 (464)
T ss_pred HHHHHHHHHHHHhCCC---------EEEEeCcHHHHH-HHHHHHh----C-------CCCEEEEcCCchhhHHHHHHHHH
Confidence 3455667788887753 356767776554 3333221 1 566788888888776643 4
Q ss_pred HHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeeccc
Q 048643 209 QIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAY 288 (506)
Q Consensus 209 ~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~ 288 (506)
...|+ +++.++. .|+++|+++|.+.+ .+|+++.+++++|.+.|+++|+++|++||++++||+||
T Consensus 193 ~~~G~---~v~~vd~-------~d~e~l~~ai~~~T------klV~lesPsNPtG~i~Dl~~I~~lAk~~g~~lIVD~A~ 256 (464)
T PLN02509 193 PRSGV---VVKRVNT-------TNLDEVAAAIGPQT------KLVWLESPTNPRQQISDIRKIAEMAHAQGALVLVDNSI 256 (464)
T ss_pred HHCCe---EEEEeCC-------CCHHHHHHhCCcCC------eEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECCc
Confidence 45677 7777753 37889998886543 38899999999999999999999999999999999999
Q ss_pred ccccccCccchhhhcCCCCCCeeEEcCccccCCCCc--ceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCcccc
Q 048643 289 AGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLD--CCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQIT 366 (506)
Q Consensus 289 gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~ 366 (506)
+.+....+ .. .++|.+..+++||++.|.+ +|+++++++..... +. .+...
T Consensus 257 a~~~~~~p-l~------~gaDivv~S~tK~l~G~gdv~gG~v~~~~~~l~~~-~~----~~~~~---------------- 308 (464)
T PLN02509 257 MSPVLSRP-LE------LGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKE-VY----FLQNS---------------- 308 (464)
T ss_pred cccccCCh-hh------cCCcEEEecCcccccCCCccceeEEEeccHHHHHH-HH----HHHHh----------------
Confidence 77654322 11 2799999999999998866 78887776543221 10 00000
Q ss_pred CCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc
Q 048643 367 LSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS 413 (506)
Q Consensus 367 ~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~ 413 (506)
.+....+..+|+.++ |.+-+..++++..++|+++.+.|+++|.++
T Consensus 309 ~g~~l~p~~A~l~lr--~L~tL~~R~~r~~~nA~~la~~L~~~p~V~ 353 (464)
T PLN02509 309 EGSGLAPFDCWLCLR--GIKTMALRIEKQQENARKIAMYLSSHPRVK 353 (464)
T ss_pred cCCCcCHHHHHHHHh--hhhhHHHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 011124456777777 457788899999999999999999988775
No 168
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.75 E-value=1.8e-15 Score=156.37 Aligned_cols=323 Identities=13% Similarity=0.083 Sum_probs=196.8
Q ss_pred HHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCC-CccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhc
Q 048643 107 GFLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLP-KSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIG 185 (506)
Q Consensus 107 ~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~-~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~ 185 (506)
..+.+.+...++ ....|....+..++.+.+.+|+.+.+|++ .+. ....++|+|+++++..++.+..+.
T Consensus 45 ~~~~~~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~----~~~i~it~G~~~al~~~~~~l~~~------ 113 (396)
T PRK09147 45 AFIKDALAANLD-GLASYPTTAGLPALREAIAAWLERRYGLPALDP----ATQVLPVNGSREALFAFAQTVIDR------ 113 (396)
T ss_pred HHHHHHHHHHhh-hhcCCCCCCCCHHHHHHHHHHHHHHhCCCcCCc----cceEEECCChHHHHHHHHHHHcCC------
Confidence 344444544443 23456555567889999999999988865 221 015778888888876665554330
Q ss_pred ccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc
Q 048643 186 RENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV 265 (506)
Q Consensus 186 ~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i 265 (506)
+..+..|+++...+..+..+++.+|+ +++.||++++++|.+|+++|++++.+. +.+++++.++|+||.+
T Consensus 114 --~~~gd~vlv~~P~y~~~~~~~~~~g~---~~~~vp~~~~~~~~~d~~~l~~~~~~~------~k~i~l~nP~NPTG~~ 182 (396)
T PRK09147 114 --DGPGPLVVCPNPFYQIYEGAALLAGA---EPYFLNCDPANNFAPDFDAVPAEVWAR------TQLLFVCSPGNPTGAV 182 (396)
T ss_pred --CCCCCEEEEcCCCccchHHHHHhcCC---EEEEeccCccccCccCHHHHHHHHhhc------cEEEEEcCCCCCcCcc
Confidence 00166788888999888999999999 999999976556789999999887643 3367778999999999
Q ss_pred c---ChhHHHHHHHHhCCEEEeecccccccccCc--cchhh--hcCCC--CCC--eeEEcCccccC-CCCcceEEEEeCc
Q 048643 266 D---PLKPLCDVAKQFGIWVHVDAAYAGSACICP--EFQHF--IDGVE--GAD--SFSLNAHKWFF-TTLDCCCLWVKDP 333 (506)
Q Consensus 266 d---pl~~I~~ia~~~g~~lhVDaA~gg~~~~~~--~~~~~--~~gi~--~aD--si~~~~hK~l~-~p~~~g~~~~r~~ 333 (506)
- .+++|+++|++|++|+++|.+|+-...-.+ ..... ...+. ..| .+..++.|.++ ....+|+++.. +
T Consensus 183 ~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~~~~-~ 261 (396)
T PRK09147 183 LPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKRSNVPGLRSGFVAGD-A 261 (396)
T ss_pred CCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCccccccEEEEeccccccCCccceeeeecCC-H
Confidence 5 578888999999999999999976542110 00000 00010 111 45567899654 44778887654 3
Q ss_pred hhHHhhhcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhc-hhHHHHHHHHHHHHHHHHHHHHHcCCCC
Q 048643 334 SALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYG-VANLRHFLRSHVNMAKLFERLVASDKRV 412 (506)
Q Consensus 334 ~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G-~~g~~~~i~~~~~~a~~l~~~l~~~~~~ 412 (506)
... +.+.....+... ....+...+++..+. .+.+++..+...+..+.+.+.|++.-.+
T Consensus 262 ~l~-~~~~~~~~~~~~--------------------~~~~~~q~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~ 320 (396)
T PRK09147 262 ALL-KKFLLYRTYHGC--------------------AMPPAVQAASIAAWNDEAHVRENRALYREKFDAVTPILAPVLDV 320 (396)
T ss_pred HHH-HHHHHHhhhccc--------------------CCCHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 322 222211111100 001122222222222 2345666667777777787887764122
Q ss_pred c-c---ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHH-hcCcEEEeeeeE--------CCEEEEEEEecCCCC
Q 048643 413 S-P---SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESIN-ASGKAYMTHAVC--------GGIYAMRFAVGATLT 479 (506)
Q Consensus 413 ~-p---~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~--------~g~~~lR~~~~~~~t 479 (506)
. | ..+.+++... ..++.+.+. +.|+....+..+ .+..++|++++.
T Consensus 321 ~~p~~g~f~~~~~~~~-------------------~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~~~~--- 378 (396)
T PRK09147 321 QLPDAGFYLWAKVPGD-------------------DTEFARRLYADYNVTVLPGSYLAREAHGVNPGAGRVRIALVA--- 378 (396)
T ss_pred CCCCeeEEEEEECCCC-------------------HHHHHHHHHHhCCEEEeCCccccccccCCCCCCCeEEEEecC---
Confidence 2 5 3344444211 134555554 457654433322 125789999964
Q ss_pred CHHHHHHHHHHHHHHH
Q 048643 480 EERHVMVAWTMVQEQL 495 (506)
Q Consensus 480 t~edi~~li~~l~~~~ 495 (506)
+++++++.++.|.++.
T Consensus 379 ~~~~l~~~l~rl~~~~ 394 (396)
T PRK09147 379 PLAECVEAAERIVDFC 394 (396)
T ss_pred CHHHHHHHHHHHHHHh
Confidence 4668888888777654
No 169
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.75 E-value=3.3e-15 Score=154.65 Aligned_cols=335 Identities=14% Similarity=0.108 Sum_probs=206.6
Q ss_pred HHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCC-cEEEcCCchHHHHHHHHHHHHHHHHh
Q 048643 105 IAGFLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNG-GGVIQGTTCEAILCTLTAARDRVLNK 183 (506)
Q Consensus 105 ~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~-~g~~t~ggt~a~l~al~~ar~~~~~~ 183 (506)
++..+..+.....+.....|....+...+.+.+.+|+.+.+|.+.+. . ..++|+|+++++..++.+..+
T Consensus 48 ~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~~ia~~l~~~~~~~~~~-----~~~I~it~G~~~al~~~~~~l~~----- 117 (403)
T PRK08636 48 PQHIIDKLCESAQKPKTHGYSVSKGIYKLRLAICNWYKRKYNVDLDP-----ETEVVATMGSKEGYVHLVQAITN----- 117 (403)
T ss_pred CHHHHHHHHHHhcCCccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC-----CCeEEECCChHHHHHHHHHHhCC-----
Confidence 33344444433322223456555567889999999999998875432 2 478999988888766655433
Q ss_pred hcccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhc-CCccEEEEEeccCCCC
Q 048643 184 IGRENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEA-GLVPLFLCATIGTTAI 262 (506)
Q Consensus 184 ~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~-g~~p~~Vv~t~gtt~t 262 (506)
++..|++.+.++..+...++..|. +++.||++.++++.+|++.|.+.+++..++ ..++.+|+.+.++|+|
T Consensus 118 ------~gd~Vlv~~P~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~i~~~~P~NPT 188 (403)
T PRK08636 118 ------PGDVAIVPDPAYPIHSQAFILAGG---NVHKMPLEYNEDFELDEDQFFENLEKALRESSPKPKYVVVNFPHNPT 188 (403)
T ss_pred ------CCCEEEEcCCCCcchHHHHHhcCC---EEEEEeccccccCccChhhhhhHHHHHHhhccCCceEEEEeCCCCCC
Confidence 667888999999999999999999 999999864445799999776666554332 2346788888899999
Q ss_pred CcccC---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCC-C-ee-EEcCccccC-CCCcceEEEEeCchh
Q 048643 263 TAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGA-D-SF-SLNAHKWFF-TTLDCCCLWVKDPSA 335 (506)
Q Consensus 263 G~idp---l~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~a-D-si-~~~~hK~l~-~p~~~g~~~~r~~~~ 335 (506)
|.+-+ +++|+++|++|++|+++|.+|+....-..... .+..+... | .+ +.++.|.++ ...-+|+++. ++..
T Consensus 189 G~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~-~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~iv~-~~~l 266 (403)
T PRK08636 189 TATVEKSFYERLVALAKKERFYIISDIAYADITFDGYKTP-SILEVEGAKDVAVESYTLSKSYNMAGWRVGFVVG-NKKL 266 (403)
T ss_pred CccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCC-ChhcCCCccccEEEEEecccccCCccceeeeeeC-CHHH
Confidence 99954 68888999999999999999976532110111 11112121 2 23 457899996 5577888765 3332
Q ss_pred HHhhhcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc--
Q 048643 336 LVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS-- 413 (506)
Q Consensus 336 l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~-- 413 (506)
. ..+.....+... ..+........ .+++. ..+.++++.+...+..+.+.+.|++. +++
T Consensus 267 i-~~~~~~~~~~~~----------------~~~~~~q~~~~-~~~~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~ 326 (403)
T PRK08636 267 V-GALKKIKSWLDY----------------GMFTPIQVAAT-IALDG-DQSCVEEIRETYRKRRDVLIESFANA-GWELQ 326 (403)
T ss_pred H-HHHHHHHHHhcc----------------cCChHHHHHHH-HHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHC-CCccc
Confidence 2 233211111100 00000011111 12221 24556677777788888899999886 555
Q ss_pred -c---ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHH-hcCcEEEeeeeEC--CEEEEEEEecCCCCCHHHHHH
Q 048643 414 -P---SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESIN-ASGKAYMTHAVCG--GIYAMRFAVGATLTEERHVMV 486 (506)
Q Consensus 414 -p---~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lR~~~~~~~tt~edi~~ 486 (506)
| ..+.+++.+.. . .....++.+.+. +.|+....+..+. +..++|+++. .+++++++
T Consensus 327 ~p~~g~~~~~~l~~~~----------~----~~~~~~l~~~ll~~~gV~v~pg~~f~~~~~~~iRi~~~---~~~~~l~~ 389 (403)
T PRK08636 327 KPRASMFVWAKIPEPA----------R----HLGSLEFSKQLLTEAKVAVSPGIGFGEYGDEYVRIALI---ENENRIRQ 389 (403)
T ss_pred CCCcceEEEEECCCcc----------C----CCCHHHHHHHHHHhCCEEEecchhhCcCCCCeEEEEec---CCHHHHHH
Confidence 4 34444543210 0 000234555544 4566544433332 3579999995 36778888
Q ss_pred HHHHHHHHHHH
Q 048643 487 AWTMVQEQLEA 497 (506)
Q Consensus 487 li~~l~~~~~~ 497 (506)
.++.|.++.+.
T Consensus 390 ~~~rl~~~l~~ 400 (403)
T PRK08636 390 AARNIKKFLKE 400 (403)
T ss_pred HHHHHHHHHHh
Confidence 88888877654
No 170
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.74 E-value=5.4e-16 Score=158.74 Aligned_cols=221 Identities=14% Similarity=0.146 Sum_probs=153.7
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHH
Q 048643 126 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQ 205 (506)
Q Consensus 126 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 205 (506)
..|....+| ++++++.|.+ ..++++||++++..++.+... ++..|+++...|.+..
T Consensus 50 ~~pt~~~L~----~~lA~l~g~~---------~~i~~~sg~~Ai~~~l~~l~~-----------~GD~Vl~~~~~y~~~~ 105 (386)
T PRK08045 50 GNPTRDVVQ----RALAELEGGA---------GAVLTNTGMSAIHLVTTVFLK-----------PGDLLVAPHDCYGGSY 105 (386)
T ss_pred CCccHHHHH----HHHHHHhCCC---------eEEEECCHHHHHHHHHHHHcC-----------CCCEEEEcCCCcHHHH
Confidence 445555555 5577777742 578899999888776665432 5667888888887544
Q ss_pred HHHH-HhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEe
Q 048643 206 KAAQ-IVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHV 284 (506)
Q Consensus 206 ka~~-~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhV 284 (506)
..+. +.+.+..+++.++ ..|++++++++++.+ .+|+++.++|++|.+-|+++|+++|+++|++++|
T Consensus 106 ~~~~~~~~~~gi~v~~vd-------~~d~e~l~~~l~~~t------klV~l~sP~NPtG~v~di~~I~~ia~~~g~~viv 172 (386)
T PRK08045 106 RLFDSLAKRGCYRVLFVD-------QGDEQALRAALAEKP------KLVLVESPSNPLLRVVDIAKICHLAREAGAVSVV 172 (386)
T ss_pred HHHHHHHhhCCeEEEEeC-------CCCHHHHHHhcccCC------eEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEE
Confidence 4332 2222111455443 358999999886543 3788899999999999999999999999999999
Q ss_pred ecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCc--ceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCC
Q 048643 285 DAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLD--CCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKD 362 (506)
Q Consensus 285 DaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~ 362 (506)
|++|+.+....+ .. .++|.+..+.|||++.+.+ .|++++++++... .+.....++
T Consensus 173 Deay~~~~~~~p-l~------~gaDivv~S~tK~l~G~~d~~~G~vi~~~~~~~~-~l~~~~~~~--------------- 229 (386)
T PRK08045 173 DNTFLSPALQNP-LA------LGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVT-ELAWWANNI--------------- 229 (386)
T ss_pred ECCCCccccCCc-hh------hCCCEEEeecceeccCCCCceeEEEEeCcHHHHH-HHHHHHHhc---------------
Confidence 999977644322 11 1789999999999997765 6777666654322 221111111
Q ss_pred ccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc
Q 048643 363 WQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS 413 (506)
Q Consensus 363 ~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~ 413 (506)
+--..++..|+.++.+ +-+..+++++.+++..+++.|+++|.++
T Consensus 230 -----g~~~~p~~~~l~~rgl--~tl~~R~~~~~~na~~la~~L~~~p~v~ 273 (386)
T PRK08045 230 -----GVTGGAFDSYLLLRGL--RTLVPRMELAQRNAQAIVKYLQTQPLVK 273 (386)
T ss_pred -----CCCCCHHHHHHHHhhh--ccHHHHHHHHHHHHHHHHHHHHcCCCEe
Confidence 1112456678777755 5689999999999999999999988765
No 171
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.74 E-value=6.8e-16 Score=159.72 Aligned_cols=240 Identities=14% Similarity=0.145 Sum_probs=155.7
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHH
Q 048643 126 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQ 205 (506)
Q Consensus 126 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 205 (506)
..|....+|+ .++++.|.+ ..+++++|+.|+..++.+... ++..|+++...|....
T Consensus 67 ~~p~~~~Le~----~lA~l~g~~---------~av~~sSG~aAi~~al~all~-----------~Gd~Vv~~~~~y~~t~ 122 (436)
T PRK07812 67 MNPTQDVVEQ----RIAALEGGV---------AALLLASGQAAETFAILNLAG-----------AGDHIVSSPRLYGGTY 122 (436)
T ss_pred CCchHHHHHH----HHHHHhCCC---------eEEEEccHHHHHHHHHHHHhC-----------CCCEEEEeCCcchHHH
Confidence 3465666665 477777765 458888999998777765432 5566777777776655
Q ss_pred HH----HHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCE
Q 048643 206 KA----AQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIW 281 (506)
Q Consensus 206 ka----~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~ 281 (506)
.. +...|+ +++.++ + ..|++.++++|++.+ .+|++..++|++|.+-|+++|+++|+++|++
T Consensus 123 ~~~~~~l~~~Gi---~v~~vd-d-----~~d~e~l~~ai~~~t------klV~ie~~sNp~G~v~Dl~~I~~la~~~gi~ 187 (436)
T PRK07812 123 NLFHYTLPKLGI---EVSFVE-D-----PDDLDAWRAAVRPNT------KAFFAETISNPQIDVLDIPGVAEVAHEAGVP 187 (436)
T ss_pred HHHHHHhhcCeE---EEEEEC-C-----CCCHHHHHHhCCCCC------eEEEEECCCCCCCeecCHHHHHHHHHHcCCE
Confidence 43 333566 677774 2 238999998887543 3888999999999999999999999999999
Q ss_pred EEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCc-ceEEEEeCch-hHHhh-----hcCCccccCCcccc-
Q 048643 282 VHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLD-CCCLWVKDPS-ALVSS-----LSTNPEYLKNKATE- 353 (506)
Q Consensus 282 lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~-~g~~~~r~~~-~l~~~-----~~~~~~yl~~~~~~- 353 (506)
++||++++.+....+ .. .++|.++.++|||++.+-+ .|.+++.+.. .+... ...++.|.......
T Consensus 188 liVD~t~a~~~~~~p-l~------~GaDivv~S~tK~lgg~G~~i~G~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (436)
T PRK07812 188 LIVDNTIATPYLIRP-LE------HGADIVVHSATKYLGGHGTAIAGVIVDGGTFDWTQGRFPGFTTPDPSYHGVVFAEL 260 (436)
T ss_pred EEEECCCcccccCCc-hh------cCCCEEEEecccccCCCCCeEEEEEEcCCccccccccccccccCCcccccchhhhc
Confidence 999999976554332 11 2799999999999986632 4445553321 11000 01112222100000
Q ss_pred -CCCcc-CCC-CccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc
Q 048643 354 -SKQVV-DYK-DWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS 413 (506)
Q Consensus 354 -~~~~~-~~~-~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~ 413 (506)
..... ... .+....+-...+...|..++ |.+.+..+++++.++|..+++.|+++|+++
T Consensus 261 ~~~~~~~~~~~~~~~~~G~~l~p~~a~l~~r--gl~tL~~R~~~~~~nA~~la~~L~~~p~v~ 321 (436)
T PRK07812 261 GPPAYALKARVQLLRDLGSAISPFNAFLIAQ--GLETLSLRIERHVANAQRVAEFLEARDEVA 321 (436)
T ss_pred chhHHHHHHHHHHHHhcCCCCCHHHHHHHhc--CcCcHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 00000 000 00111233345566776666 678899999999999999999999998765
No 172
>PRK05968 hypothetical protein; Provisional
Probab=99.74 E-value=7e-16 Score=158.38 Aligned_cols=217 Identities=15% Similarity=0.204 Sum_probs=150.0
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHH-
Q 048643 126 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCAL- 204 (506)
Q Consensus 126 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~- 204 (506)
..|...++| +.+++++|.+. .+++++|+.|+..++.+... ++..|+++...|.+.
T Consensus 61 ~~p~~~~le----~~lA~l~g~~~---------av~~~sG~~Ai~~al~al~~-----------~Gd~Vl~~~~~y~~t~ 116 (389)
T PRK05968 61 DNPTVRAFE----EMLAKLEGAED---------ARGFASGMAAISSTVLSFVE-----------PGDRIVAVRHVYPDAF 116 (389)
T ss_pred CChhHHHHH----HHHHHHhCCCc---------EEEECCHHHHHHHHHHHHhC-----------CCCEEEEeCCCchHHH
Confidence 345555666 45788888753 36667788888777654322 556677777777653
Q ss_pred ---HHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCE
Q 048643 205 ---QKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIW 281 (506)
Q Consensus 205 ---~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~ 281 (506)
.+.+...|+ +++.++.+ |++.|++++ +.+ .+|++..++++++.+.|+++|+++|++||++
T Consensus 117 ~~~~~~~~~~G~---~v~~vd~~-------d~~~l~~~i-~~t------klV~ie~pt~~~~~~~dl~~i~~la~~~gi~ 179 (389)
T PRK05968 117 RLFETILKRMGV---EVDYVDGR-------DEEAVAKAL-PGA------KLLYLESPTSWVFELQDVAALAALAKRHGVV 179 (389)
T ss_pred HHHHHHHHHcCc---eEEEeCCC-------CHHHHHHhc-ccC------CEEEEECCCCCCCcHHHHHHHHHHHHHcCCE
Confidence 356667788 88888632 788998887 322 3678888999999999999999999999999
Q ss_pred EEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCc--ceEEEEeCchhHHhhhcCCccccCCccccCCCccC
Q 048643 282 VHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLD--CCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVD 359 (506)
Q Consensus 282 lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 359 (506)
++||++|+.+....+ .. .++|.++.++||+++.|-+ .|+++ .+++.+.+.......++.
T Consensus 180 vivD~a~a~~~~~~p-~~------~g~Divv~S~tK~l~g~~~~~gG~i~-~~~~~~~~l~~~~~~~~g----------- 240 (389)
T PRK05968 180 TMIDNSWASPVFQRP-IT------LGVDLVIHSASKYLGGHSDTVAGVVA-GSKEHIARINAEAYPYLG----------- 240 (389)
T ss_pred EEEECCCcchhccCc-hh------cCCcEEEeeccccccCCCCeEEEEEE-ECHHHHHHHHHHHHHhCC-----------
Confidence 999999976543222 11 1689999999999998854 56555 444333221111111111
Q ss_pred CCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc
Q 048643 360 YKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS 413 (506)
Q Consensus 360 ~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~ 413 (506)
-....+..|..++ +.+.+..++++..++++++.+.|+++|+++
T Consensus 241 ---------~~~~~~~A~~~l~--~L~tl~~r~~~~~~~a~~la~~L~~~p~v~ 283 (389)
T PRK05968 241 ---------AKLSPFEAWLLLR--GLRTLPLRMKAHEASALEIARRLKAHPVVE 283 (389)
T ss_pred ---------CCCChHHHHHHHc--ccCcHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 0122455566555 456778999999999999999999998876
No 173
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.74 E-value=8e-16 Score=156.98 Aligned_cols=217 Identities=16% Similarity=0.141 Sum_probs=153.6
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHH
Q 048643 126 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQ 205 (506)
Q Consensus 126 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 205 (506)
..|....+|+.+ +++.|.. ..++++||++|+..++.+... ++..|++++..|....
T Consensus 59 ~npt~~~Le~~i----A~le~~~---------~~~~~~sG~~Ai~~~l~all~-----------~GD~Vvv~~~~Y~~t~ 114 (394)
T PRK09028 59 GTPTHFAFQAAI----VELEGGA---------GTALYPSGAAAISNALLSFLK-----------AGDHLLMVDSCYEPTR 114 (394)
T ss_pred CCchHHHHHHHH----HHHhCCC---------cEEEECCHHHHHHHHHHHHhC-----------CCCEEEEECCCcHHHH
Confidence 356666777664 4444432 568899999998877765432 5667778877876665
Q ss_pred HH----HHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCE
Q 048643 206 KA----AQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIW 281 (506)
Q Consensus 206 ka----~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~ 281 (506)
.. ....|+ +++.++.+ +.+.|++++++.+ .+|+++.++|++|.+.|+++|+++|+++|+|
T Consensus 115 ~l~~~~l~~~Gi---~v~~v~~~-------~~e~l~~~l~~~T------klV~lespsNPtg~v~dl~~I~~la~~~g~~ 178 (394)
T PRK09028 115 DLCDKILKGFGI---ETTYYDPM-------IGEGIRELIRPNT------KVLFLESPGSITMEVQDVPTLSRIAHEHDIV 178 (394)
T ss_pred HHHHHhhhhcce---EEEEECCC-------CHHHHHHhcCcCc------eEEEEECCCCCCCcHHHHHHHHHHHHHcCCE
Confidence 43 344677 77766532 4577888876544 3899999999999999999999999999999
Q ss_pred EEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCc--ceEEEEeCchhHHhhhcCCccccCCccccCCCccC
Q 048643 282 VHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLD--CCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVD 359 (506)
Q Consensus 282 lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 359 (506)
++||++|+.+....| ... +||.+..+.|||++.+-+ .|++ +.++....+ +.....+
T Consensus 179 lvvD~t~a~p~~~~P-l~~------GaDivv~S~tK~l~Gh~d~~~G~~-~~~~~~~~~-l~~~~~~------------- 236 (394)
T PRK09028 179 VMLDNTWASPINSRP-FEM------GVDISIQAATKYIVGHSDVMLGTA-TANEKHWDQ-LREHSYL------------- 236 (394)
T ss_pred EEEECCccccccCCc-ccc------CceEEEEeCCeEecCCCCEEEEEE-ECCHHHHHH-HHHHHHh-------------
Confidence 999999987654333 211 799999999999998833 4443 455433221 1100000
Q ss_pred CCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc
Q 048643 360 YKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS 413 (506)
Q Consensus 360 ~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~ 413 (506)
.+.-..+...|..++ |.+-+.-+++++.++|..+++.|+++|.++
T Consensus 237 -------~G~~~~p~~a~l~~r--gl~TL~lR~~~~~~na~~la~~L~~~p~v~ 281 (394)
T PRK09028 237 -------MGQCTSPDDVYLAMR--GLRTLGVRLAQHEKNALKVANWLATRPEVD 281 (394)
T ss_pred -------cCCCCCHHHHHHHHc--ccCcHHHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 122235567787776 567789999999999999999999988765
No 174
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.74 E-value=3.3e-16 Score=159.72 Aligned_cols=218 Identities=13% Similarity=0.168 Sum_probs=153.7
Q ss_pred ccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHH
Q 048643 125 ISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCAL 204 (506)
Q Consensus 125 ~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~ 204 (506)
...|....+|++ ++++.|.+ ..++++||++|+..++.+... ++..|++++..+...
T Consensus 47 ~gnPt~~~lE~~----lA~l~g~~---------~~~~~~sG~~Ai~~al~all~-----------~GD~Vl~~~~~y~~t 102 (377)
T TIGR01324 47 RGTLTHFALQDA----MCELEGGA---------GCYLYPSGLAAVTNSILAFVK-----------AGDHVLMVDSAYEPT 102 (377)
T ss_pred CCCccHHHHHHH----HHHHhCCC---------cEEEECcHHHHHHHHHHHhcC-----------CCCEEEEcCCCcHHH
Confidence 345767778766 56666653 568889999999887765532 566777787777655
Q ss_pred HHH----HHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCC
Q 048643 205 QKA----AQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGI 280 (506)
Q Consensus 205 ~ka----~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~ 280 (506)
... +..+|+ +++.++.+ +.+.|++++++.+ .+|+++.++|++|.+.|+++|+++|+++|+
T Consensus 103 ~~~~~~~~~~~gi---~v~~~d~~-------~~e~l~~~i~~~t------klV~lesp~Np~g~~~dl~~I~~la~~~g~ 166 (377)
T TIGR01324 103 RYFCDIVLKRMGV---DITYYDPL-------IGEDIATLIQPNT------KVLFLEAPSSITFEIQDIPAIAKAARNPGI 166 (377)
T ss_pred HHHHHHHHHhcCc---EEEEECCC-------CHHHHHHhcCCCc------eEEEEECCCCCCCcHHHHHHHHHHHHHcCC
Confidence 543 345677 77766532 2277888876544 389999999999999999999999999999
Q ss_pred EEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCc--ceEEEEeCchhHHhhhcCCccccCCccccCCCcc
Q 048643 281 WVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLD--CCCLWVKDPSALVSSLSTNPEYLKNKATESKQVV 358 (506)
Q Consensus 281 ~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~ 358 (506)
|++||++|+.+...-+ .. .++|.+..+.|||++.+.+ .|+++.+ ++.+.. +.. ..++
T Consensus 167 ~livD~t~a~g~~~~p-l~------~gaDivv~S~tK~l~G~~d~~gG~v~~~-~~~~~~-l~~-~~~~----------- 225 (377)
T TIGR01324 167 VIMIDNTWAAGLLFKP-LE------HGVDISIQAGTKYLVGHSDIMIGTVVAN-ARTWDQ-LRE-HSYL----------- 225 (377)
T ss_pred EEEEECCCccccccCc-cc------cCceEEEecCceeccCCCCceEEEEEeC-HHHHHH-HHH-HHHH-----------
Confidence 9999999987765432 11 2799999999999998754 5655554 333221 110 0111
Q ss_pred CCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc
Q 048643 359 DYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS 413 (506)
Q Consensus 359 ~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~ 413 (506)
.+....+...|..++ |.+-+..+++++.++|..+++.|+++|.++
T Consensus 226 --------~G~~l~p~~a~~~~r--gl~tl~~R~~~~~~~a~~la~~L~~~p~v~ 270 (377)
T TIGR01324 226 --------MGQMVDADDAYTTLR--GLRTLGVRLKQHQESSLAIAKWLSEQPEVA 270 (377)
T ss_pred --------hCCCCCHHHHHHHHh--hhhhHHHHHHHHHHHHHHHHHHHHhCCCcC
Confidence 111224466777777 456777789999999999999999988765
No 175
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.74 E-value=6.6e-16 Score=158.54 Aligned_cols=218 Identities=18% Similarity=0.205 Sum_probs=152.3
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHH
Q 048643 126 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQ 205 (506)
Q Consensus 126 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 205 (506)
..|...++|+. ++++.|.+. ++++++|++|+..++.+... ++..|+++...|.+..
T Consensus 59 ~~p~~~~Le~~----lA~~~g~~~---------~i~~~sG~~Ai~~~l~all~-----------~Gd~Vl~~~~~y~~t~ 114 (388)
T PRK07811 59 GNPTRTALEEQ----LAALEGGAY---------GRAFSSGMAATDCLLRAVLR-----------PGDHIVIPNDAYGGTF 114 (388)
T ss_pred CCccHHHHHHH----HHHHhCCCc---------eEEeCCHHHHHHHHHHHHhC-----------CCCEEEEcCCCchHHH
Confidence 44666677655 677777653 36667778888777766532 5567888888887655
Q ss_pred HHHHH----hCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCE
Q 048643 206 KAAQI----VGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIW 281 (506)
Q Consensus 206 ka~~~----~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~ 281 (506)
..+.. .|+ +++.++ ..|+++|++++++++ .+|+++.+++++|.+.|+++|+++|+++|++
T Consensus 115 ~~~~~~~~~~gi---~~~~~d-------~~d~e~l~~~i~~~t------klV~ie~p~NPtg~~~dl~~I~~la~~~gi~ 178 (388)
T PRK07811 115 RLIDKVFTRWGV---EYTPVD-------LSDLDAVRAAITPRT------KLIWVETPTNPLLSITDIAALAELAHDAGAK 178 (388)
T ss_pred HHHHHhCcCCCe---EEEEeC-------CCCHHHHHHhcCcCC------eEEEEECCCCCcceecCHHHHHHHHHHcCCE
Confidence 44332 355 555554 248999999987644 3888889999999999999999999999999
Q ss_pred EEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCc--ceEEEEeCchhHHhhhcCCccccCCccccCCCccC
Q 048643 282 VHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLD--CCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVD 359 (506)
Q Consensus 282 lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 359 (506)
+++|++|+.+....+ .. .++|.++.+++|+++.|.+ .|+++++++... +.+. ++...
T Consensus 179 lIvD~a~a~~~~~~p-~~------~gaDivv~S~sK~l~g~~~~~gG~vv~~~~~l~-~~~~----~~~~~--------- 237 (388)
T PRK07811 179 VVVDNTFASPYLQQP-LA------LGADVVVHSTTKYIGGHSDVVGGALVTNDEELD-EAFA----FLQNG--------- 237 (388)
T ss_pred EEEECCCCccccCCc-hh------hCCcEEEecCceeecCCCCcEEEEEEECCHHHH-HHHH----HHHHh---------
Confidence 999999976543222 11 1789999999999998755 577777765432 2221 11100
Q ss_pred CCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc
Q 048643 360 YKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS 413 (506)
Q Consensus 360 ~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~ 413 (506)
.+....++..|..++. .+.+..++++..+++..+.+.|+++|+++
T Consensus 238 -------~g~~~s~~~a~l~~~~--L~tl~~R~~~~~~na~~la~~L~~~p~v~ 282 (388)
T PRK07811 238 -------AGAVPGPFDAYLTLRG--LKTLAVRMDRHSENAEAVAEFLAGHPEVS 282 (388)
T ss_pred -------cCCCCCHHHHHHHHhc--cCcHHHHHHHHHHHHHHHHHHHHhCCCee
Confidence 0111233456666664 45678889999999999999999988765
No 176
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.74 E-value=2.9e-15 Score=151.26 Aligned_cols=327 Identities=17% Similarity=0.106 Sum_probs=191.8
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCcc
Q 048643 72 METILQDVQEHIVPGVTHWQSPNYFAYFPSSGSIAGFLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSF 151 (506)
Q Consensus 72 ~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~ 151 (506)
.++.++.+++.+..+-..+ --.|+|.-.. +.......+.+..+ + +...+.+++.+.+++.+|.+++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~-~~~ylgl~~~-~~~~~~~~~~~~~~----~-------g~~~~~~~Le~~lA~~~g~~~e- 72 (346)
T TIGR03576 7 REKALEIIREKISRGGRDS-LYDLTGLAGG-FKIDEEDLELLETY----V-------GPAIFEEKVQELGREHLGGPEE- 72 (346)
T ss_pred HHHHHHHHHHHHhccCCcc-ccccccCCCC-hhHHHHHHHHHHHh----c-------CCHHHHHHHHHHHHHHcCCCcc-
Confidence 4677888888777664322 2257776432 22222233333332 1 2347778888899999999765
Q ss_pred ccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEe--C-CCCchHHHHHHHHhCCCCCCeEEEecCCCCC
Q 048643 152 LFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYG--S-DQTHCALQKAAQIVGIDLKNFRAIKTTKSSS 228 (506)
Q Consensus 152 ~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~--s-~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~ 228 (506)
..++++||++||..++.+..+ ++..|++ + ...|.++..++++.|. +++..
T Consensus 73 ------~ilv~~gg~~a~~~~~~al~~-----------~gd~Vli~~~d~p~~~s~~~~~~l~ga---~~~~~------- 125 (346)
T TIGR03576 73 ------KILVFNRTSSAILATILALEP-----------PGRKVVHYLPEKPAHPSIPRSCKLAGA---EYFES------- 125 (346)
T ss_pred ------eEEEECCHHHHHHHHHHHhCC-----------CCCEEEECCCCCCCchhHHHHHHHcCC---EEecc-------
Confidence 689999999999888776543 4445553 2 5799999999999998 55322
Q ss_pred cccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc---cChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCC
Q 048643 229 YGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV---DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGV 305 (506)
Q Consensus 229 ~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i---dpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi 305 (506)
.|+++|+. . . .+.+|++| |++++|.+ .||++|+++|++||+|++||.||+.+............ .
T Consensus 126 --~~l~~l~~----~-~---~~~lIiit-g~s~~G~v~~~~~L~~i~~la~~~~~~livDEAy~~~~~~~~~~~~~~~-~ 193 (346)
T TIGR03576 126 --DELSELKK----I-D---GTSLVVIT-GSTMDLKVVSEEDLKRVIKQAKSKEAIVLVDDASGARVRRLYGQPPALD-L 193 (346)
T ss_pred --CCHHHHhh----C-c---CceEEEEE-CCCCCCcccCHHHHHHHHHHHHHcCCEEEEECCccccccccCCCCCHHH-c
Confidence 13444322 1 1 13355555 56889998 89999999999999999999999865432111111111 1
Q ss_pred CCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhc-CCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhc
Q 048643 306 EGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLS-TNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYG 384 (506)
Q Consensus 306 ~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~-~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G 384 (506)
++|.++.+++|++..+. .|+++.+. ... +.+. ...+|... . .+...++++..+.
T Consensus 194 -~~divv~s~SKalaG~r-~G~v~~~~-~li-~~l~~~~~~~~~s------------------~---~~~~~~aa~~aL~ 248 (346)
T TIGR03576 194 -GADLVVTSTDKLMDGPR-GGLLAGRK-ELV-DKIKSVGEQFGLE------------------A---QAPLLAAVVRALE 248 (346)
T ss_pred -CCcEEEeccchhccccc-eEEEEeCH-HHH-HHHHHhhcCcccC------------------c---cHHHHHHHHHHHh
Confidence 46888889999764443 56666543 332 3332 22222211 0 1122233333332
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHcCCCCc--c-ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEee
Q 048643 385 VANLRHFLRSHVNMAKLFERLVASDKRVS--P-SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTH 461 (506)
Q Consensus 385 ~~g~~~~i~~~~~~a~~l~~~l~~~~~~~--p-~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~ 461 (506)
....+.+.+...++.+++.+.++.. .+. | +.+.+++.+. +. .+...+.|.+.|++....
T Consensus 249 ~~~~~~~~~~l~~r~~~~~~~l~~~-~~~~~~~~f~~~~~~~~----------------~~-~~~~~~ll~~~gV~v~~~ 310 (346)
T TIGR03576 249 EFELSRIRDAFKRKEEVYLRLFDKL-NVERTPTGFVIKGVEEE----------------KL-IEIGLDLLRNYGIITITA 310 (346)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHhC-CCCcCCCeEEEEeCCCC----------------CH-HHHHHHHHHhCCEEEeCC
Confidence 2123445556666677777777654 333 4 6555555321 00 123344555667755543
Q ss_pred eeEC-CEEEEEEEecCCCCCHHHHHHHHHHHHHH
Q 048643 462 AVCG-GIYAMRFAVGATLTEERHVMVAWTMVQEQ 494 (506)
Q Consensus 462 ~~~~-g~~~lR~~~~~~~tt~edi~~li~~l~~~ 494 (506)
..+. ..+++|++++.+.-++.+.+.++++|++.
T Consensus 311 ~~f~~~~~~vRis~~~~~~~~~~~~~~~~al~~~ 344 (346)
T TIGR03576 311 VGMPGASKTLRFDLAAKDAERIGDDYLVEAVKDS 344 (346)
T ss_pred cccCCCCCeEEEEEecChHHhcCHHHHHHHHHhc
Confidence 3332 25699999975432333799999998764
No 177
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.74 E-value=2.2e-15 Score=153.21 Aligned_cols=280 Identities=12% Similarity=0.043 Sum_probs=184.7
Q ss_pred HHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCCC
Q 048643 136 IVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGIDL 215 (506)
Q Consensus 136 ~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~ 215 (506)
++.+.+++.++.+.+ ..++|+|+++++..++.+..+ ++..|+++...|......++..|+
T Consensus 64 ~lr~aia~~~~~~~~-------~I~it~G~~~al~~~~~~l~~-----------~gd~vlv~~P~y~~~~~~~~~~g~-- 123 (353)
T PRK05387 64 ALRQAIAAYYGLDPE-------QVFVGNGSDEVLAHAFLAFFN-----------HDRPLLFPDITYSFYPVYAGLYGI-- 123 (353)
T ss_pred HHHHHHHHHhCCCHH-------HEEEcCCHHHHHHHHHHHhcC-----------CCCEEEEeCCCHHHHHHHHHHcCC--
Confidence 445666667777655 789999999988777665543 566788888888888888899999
Q ss_pred CCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHh-CCEEEeeccccccccc
Q 048643 216 KNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQF-GIWVHVDAAYAGSACI 294 (506)
Q Consensus 216 ~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~-g~~lhVDaA~gg~~~~ 294 (506)
+++.+|.++ ++.+|+++|++ .. .+|+.+.++|+||.+-|.+++.++++.+ ++|+++|.+|..+.
T Consensus 124 -~~~~v~~~~--~~~~d~~~l~~----~~------~~v~~~~P~NPtG~~~~~~~~~~l~~~~~~~~livDe~y~~~~-- 188 (353)
T PRK05387 124 -PYEEIPLDD--DFSIDVEDYLR----PN------GGIIFPNPNAPTGIALPLAEIERILAANPDSVVVIDEAYVDFG-- 188 (353)
T ss_pred -EEEEeecCC--CCCCCHHHHHh----cC------CEEEEeCCCCCCCCCCCHHHHHHHHHhCCCcEEEEeCcccccC--
Confidence 999999874 57899999863 11 2678889999999999999999999886 99999999995431
Q ss_pred CccchhhhcCCCCCCeeEEcCccccCCC-CcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCccccCCCCCCc
Q 048643 295 CPEFQHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRS 373 (506)
Q Consensus 295 ~~~~~~~~~gi~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~a 373 (506)
........... .-..+..++.|.++.| ..+|+++. ++... +.+........ .++ ...
T Consensus 189 ~~~~~~~~~~~-~~~i~~~S~SK~~~~~GlR~G~~~~-~~~~~-~~l~~~~~~~~-------------~~~------~~~ 246 (353)
T PRK05387 189 GESAIPLIDRY-PNLLVVQTFSKSRSLAGLRVGFAIG-HPELI-EALNRVKNSFN-------------SYP------LDR 246 (353)
T ss_pred CcchHHHHhhC-CCEEEEEehhHhhcchhhhceeeec-CHHHH-HHHHHhhccCC-------------CCC------cCH
Confidence 11111111111 2246777899998744 56788775 33332 23321110000 000 112
Q ss_pred hHHHHHHHHhc-hhHHHHHHHHHHHHHHHHHHHHHcCCCCc--c---ceEEEeecCCCcccccccccchHHHHHHHHHHH
Q 048643 374 LKLWLVIRNYG-VANLRHFLRSHVNMAKLFERLVASDKRVS--P---SAVMDKLKPKYENCHSQQLVTEEEAINEFNREL 447 (506)
Q Consensus 374 l~~~~~l~~~G-~~g~~~~i~~~~~~a~~l~~~l~~~~~~~--p---~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l 447 (506)
+..+++...+. .+.+++..++..++++++.+.|++. +++ | +.+.++..+. ...++
T Consensus 247 ~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~------------------~~~~~ 307 (353)
T PRK05387 247 LAQAGAIAAIEDEAYFEETRAKVIATRERLVEELEAL-GFEVLPSKANFVFARHPSH------------------DAAEL 307 (353)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCeECCCcCcEEEEECCCC------------------CHHHH
Confidence 23333333332 3456777888888999999999887 676 4 4444443221 12456
Q ss_pred HHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 048643 448 LESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQL 495 (506)
Q Consensus 448 ~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~ 495 (506)
.+.|.++|+............++|++++ +++++++++++|+++.
T Consensus 308 ~~~l~~~gi~v~~~~~~~~~~~iRis~~----~~~~~~~~~~~L~~~~ 351 (353)
T PRK05387 308 AAKLRERGIIVRHFNKPRIDQFLRITIG----TDEEMEALVDALKEIL 351 (353)
T ss_pred HHHHHHCCEEEEECCCCCCCCeEEEEeC----CHHHHHHHHHHHHHHh
Confidence 6777777865322211123568999985 4579999999998864
No 178
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.74 E-value=5.8e-16 Score=158.59 Aligned_cols=218 Identities=16% Similarity=0.139 Sum_probs=154.9
Q ss_pred ccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHH
Q 048643 125 ISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCAL 204 (506)
Q Consensus 125 ~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~ 204 (506)
...|...++|+. +++++|.+ ..++++||+.|+..++.+... ++..|+++...|.+.
T Consensus 50 ~~np~~~~lE~~----lA~l~g~~---------~~l~~~sG~~Ai~~~l~~ll~-----------~GD~Vlv~~~~y~~~ 105 (385)
T PRK08574 50 EENPTLRPLEEA----LAKLEGGV---------DALAFNSGMAAISTLFFSLLK-----------AGDRVVLPMEAYGTT 105 (385)
T ss_pred CCCccHHHHHHH----HHHHhCCC---------cEEEeCCHHHHHHHHHHHHhC-----------CCCEEEEcCCCchhH
Confidence 355666777755 67777754 457888899998877765432 566788889999887
Q ss_pred HHHHHH---hCCCCCCeEEEecCCCCCcccCHHHHHHHHHH-HHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCC
Q 048643 205 QKAAQI---VGIDLKNFRAIKTTKSSSYGLSPDSLLTQINL-DVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGI 280 (506)
Q Consensus 205 ~ka~~~---~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~-~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~ 280 (506)
...++. .|+ +++.++ +|+++|++++++ . +.+|++..++|++|.+-|+++|+++|+++|+
T Consensus 106 ~~~~~~~~~~g~---~v~~~~--------~d~~~l~~~i~~~~------tklV~ie~p~NPtG~v~dl~~I~~la~~~gi 168 (385)
T PRK08574 106 LRLLKSLEKFGV---KVVLAY--------PSTEDIIEAIKEGR------TKLVFIETMTNPTLKVIDVPEVAKAAKELGA 168 (385)
T ss_pred HHHHHHhhccCc---EEEEEC--------CCHHHHHHhcCccC------ceEEEEECCCCCCCEecCHHHHHHHHHHcCC
Confidence 776644 355 555542 367888888865 3 3478889999999999999999999999999
Q ss_pred EEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCc--ceEEEEeCchhHHhhhcCCccccCCccccCCCcc
Q 048643 281 WVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLD--CCCLWVKDPSALVSSLSTNPEYLKNKATESKQVV 358 (506)
Q Consensus 281 ~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~ 358 (506)
|++||++|+.+....+ .. .++|.++.++||+++.|-+ .|++++.+++...+ +.....++
T Consensus 169 ~livD~t~a~~~~~~~-l~------~GaDivv~S~sK~l~g~~d~~gG~vi~~~~~~~~~-~~~~~~~~----------- 229 (385)
T PRK08574 169 ILVVDNTFATPLLYRP-LR------HGADFVVHSLTKYIAGHNDVVGGVAVAWSGEFLEE-LWEWRRRL----------- 229 (385)
T ss_pred EEEEECCCCccccCCh-hh------hCCcEEEeeCceeecCCCCceeEEEEECcHHHHHH-HHHHHHhc-----------
Confidence 9999999976644322 11 2689999999999998755 46566666543322 11000011
Q ss_pred CCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc
Q 048643 359 DYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS 413 (506)
Q Consensus 359 ~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~ 413 (506)
+.....+..|..++ |.+-+..++++..++|.++.+.|+++|.++
T Consensus 230 ---------g~~~~p~~a~l~l~--~l~tL~~R~~~~~~na~~la~~L~~~p~v~ 273 (385)
T PRK08574 230 ---------GTIMQPFEAYLVLR--GLKTLEVRFERQCRNAMAIAEFLSEHPKVA 273 (385)
T ss_pred ---------CCCCCHHHHHHHHc--ccCcHHHHHHHHHHHHHHHHHHHHcCCCcC
Confidence 11123455566666 456788899999999999999999988765
No 179
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.74 E-value=7e-16 Score=157.40 Aligned_cols=278 Identities=14% Similarity=0.111 Sum_probs=173.0
Q ss_pred HHHHHHHHHcCCCCccccCCCCcEEE-cCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCC
Q 048643 136 IVMDWLGQMLKLPKSFLFSGNGGGVI-QGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGID 214 (506)
Q Consensus 136 ~~~~~la~l~g~~~~~~~~~~~~g~~-t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g 214 (506)
++.+.+++.+|++.+ ..++ ++|+++++..++.+... ++..|+++...+..+...++..|+
T Consensus 73 ~lr~~ia~~~~~~~~-------~i~~~~~Ga~~~i~~~~~~~~~-----------~gd~vlv~~p~y~~~~~~~~~~g~- 133 (361)
T PRK00950 73 ELREALSKYTGVPVE-------NIIVGGDGMDEVIDTLMRTFID-----------PGDEVIIPTPTFSYYEISAKAHGA- 133 (361)
T ss_pred HHHHHHHHHhCCCHH-------HEEEeCCCHHHHHHHHHHHhcC-----------CCCEEEEcCCChHHHHHHHHHcCC-
Confidence 344556666787654 5677 45555555444433211 455688888877777788889999
Q ss_pred CCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeeccccccccc
Q 048643 215 LKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACI 294 (506)
Q Consensus 215 ~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~~ 294 (506)
+++.+|.+. ++.+|+++|++++.+. +.+|+++.++|+||.+-|+++|.++|+++|+++++|++|+.+.
T Consensus 134 --~~~~~~~~~--~~~~~~~~l~~~~~~~------~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~li~De~y~~~~-- 201 (361)
T PRK00950 134 --KPVYAKREE--DFSLDVDSVLNAITEK------TKVIFLCTPNNPTGNLIPEEDIRKILESTDALVFVDEAYVEFA-- 201 (361)
T ss_pred --EEEEeecCC--CCCcCHHHHHHHhccC------CCEEEEeCCCCCCCCCcCHHHHHHHHHHCCcEEEEECchhhhC--
Confidence 999998653 5789999999988543 2367778999999999999999999999999999999997543
Q ss_pred CccchhhhcCCCCCCeeEEcCccccCCC-CcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCccccCCCCCCc
Q 048643 295 CPEFQHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRS 373 (506)
Q Consensus 295 ~~~~~~~~~gi~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~a 373 (506)
............. -.+..++.|.++.| ...|+++..+ . +...+.....+. . ...
T Consensus 202 ~~~~~~~~~~~~~-vi~~~S~SK~~g~~GlRiG~~~~~~-~-~~~~~~~~~~~~----------------~------~~~ 256 (361)
T PRK00950 202 EYDYTPLALEYDN-LIIGRTFSKVFGLAGLRIGYGFVPE-W-LIDYYMRAKTPF----------------S------LTR 256 (361)
T ss_pred ccchHHHHHhcCC-EEEEEeehHhhcCchhhcchhcCCH-H-HHHHHHHhcCCC----------------C------CCH
Confidence 1122222221111 13345788998754 4567776543 2 222221110000 0 112
Q ss_pred hHHHHHHHHhch-hHHHHHHHHHHHHHHHHHHHHHcCCCCc--c---ceEEEeecCCCcccccccccchHHHHHHHHHHH
Q 048643 374 LKLWLVIRNYGV-ANLRHFLRSHVNMAKLFERLVASDKRVS--P---SAVMDKLKPKYENCHSQQLVTEEEAINEFNREL 447 (506)
Q Consensus 374 l~~~~~l~~~G~-~g~~~~i~~~~~~a~~l~~~l~~~~~~~--p---~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l 447 (506)
+....++..+.. +.+++..++..++.+++.+.|. +. | +.+.+++.+. ...++
T Consensus 257 ~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~l~----~~~~~~~~~~i~~~~~~~------------------~~~~~ 314 (361)
T PRK00950 257 LSQAAAIAALSDKEYIEKSIEHGIKSREYLYNELP----FKVYPSEANFVLVDVTPM------------------TAKEF 314 (361)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhhcC----eeECCCcceEEEEECCCC------------------CHHHH
Confidence 333344444432 3356666666666666666654 33 3 5566665221 13466
Q ss_pred HHHHHhcCcEEEeeeeE--CCEEEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 048643 448 LESINASGKAYMTHAVC--GGIYAMRFAVGATLTEERHVMVAWTMVQEQL 495 (506)
Q Consensus 448 ~~~l~~~g~~~~~~~~~--~g~~~lR~~~~~~~tt~edi~~li~~l~~~~ 495 (506)
.+.|.++|+....+..+ .+..++|+++. +.+++++++++|+++.
T Consensus 315 ~~~l~~~gv~v~~~~~f~~~~~~~lRis~~----~~~~~~~l~~~L~~il 360 (361)
T PRK00950 315 CEELLKRGVIVRDCTSFRGLGDYYIRVSIG----TFEENERFLEILKEIV 360 (361)
T ss_pred HHHHHHCCEEEeeCCccCCCCCCeEEEECC----CHHHHHHHHHHHHHHh
Confidence 77777777643332323 23568999985 5669999999998763
No 180
>PRK06855 aminotransferase; Validated
Probab=99.74 E-value=3e-15 Score=156.27 Aligned_cols=351 Identities=11% Similarity=0.086 Sum_probs=203.7
Q ss_pred HHHHHHHHHHhhc-CCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHh
Q 048643 105 IAGFLGEMLSSGF-NVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNK 183 (506)
Q Consensus 105 ~~~~~~~~l~~~~-n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~ 183 (506)
+|..+.+.+...+ +.....|....+..++.+.+.+|+.+..|++.+. ...++|+|+++++..++. ..+
T Consensus 49 ~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~-----~~I~it~G~~~al~~~~~-l~~----- 117 (433)
T PRK06855 49 IPDWMKEIVAELVMDDKSYGYCPTKGVLETREFLAELNNKRGGAQITP-----DDIIFFNGLGDAIAKIYG-LLR----- 117 (433)
T ss_pred CCHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHhccCCCCCH-----hHEEEcCcHHHHHHHHHH-hcC-----
Confidence 3444454444443 2233456666678899999999999987865432 378899999888766542 222
Q ss_pred hcccCCCCeEEEeCCCCchHHHHHH-HHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCC
Q 048643 184 IGRENISKLVVYGSDQTHCALQKAA-QIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAI 262 (506)
Q Consensus 184 ~~~~~~~~~~v~~s~~~H~s~~ka~-~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~t 262 (506)
++..|++...+++....+. ...|+ +++.+|+++++++.+|+++|+++++... .+.+++.+.++|+|
T Consensus 118 ------~Gd~Vlv~~P~Y~~~~~~~~~~~g~---~~v~v~~~~~~~~~~d~~~l~~~~~~~~----~~~~i~l~~P~NPT 184 (433)
T PRK06855 118 ------REARVIGPSPAYSTHSSAEAAHAGY---PPVTYRLDPENNWYPDLDDLENKVKYNP----SIAGILLINPDNPT 184 (433)
T ss_pred ------CCCeEEEeCCCCchHHHHHHHhcCC---eEEEEecccccCCCCCHHHHHHHHhcCC----CceEEEEECCCCCC
Confidence 5567888888887655432 34577 8888998765567899999999986321 12356777899999
Q ss_pred CcccC---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCC-eeEEcCccccC-CCCcceEEEEeCc---h
Q 048643 263 TAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGAD-SFSLNAHKWFF-TTLDCCCLWVKDP---S 334 (506)
Q Consensus 263 G~idp---l~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aD-si~~~~hK~l~-~p~~~g~~~~r~~---~ 334 (506)
|.+-+ +++|+++|++||+|+++|.+|+....-.........-...-. .+..++.|.++ ..+-+|++++.+. .
T Consensus 185 G~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~~~~~I~~~S~SK~~~~pGlRiG~ii~p~~~~~~ 264 (433)
T PRK06855 185 GAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIGDVPGIALKGISKELPWPGSRCGWIEVYNADKDE 264 (433)
T ss_pred CcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHHHcCcCCeEEEecCccccCCCcceEEEEEEeCCchhh
Confidence 99955 678888899999999999999765431111111111011111 34566899997 5577999887421 1
Q ss_pred hHHhhhcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHh--c--hhHHHHHHHHHHHHHHHHHHHHHcCC
Q 048643 335 ALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNY--G--VANLRHFLRSHVNMAKLFERLVASDK 410 (506)
Q Consensus 335 ~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--G--~~g~~~~i~~~~~~a~~l~~~l~~~~ 410 (506)
.+...+.....+... .. +. ..+.-.++.+.+ + .+.++++.+...++.+.+.+.|++.+
T Consensus 265 ~~~~~~~~~~~~~~~--------------~~-~~---~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~~ 326 (433)
T PRK06855 265 VFKKYINSILNAKMI--------------EV-CS---TTLPQMAIPRIMSHPEYKNYLKERNKRYEKRSNIAYEKLKDVP 326 (433)
T ss_pred HHHHHHHHHHHhhcc--------------cc-CC---ChHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 111111100000000 00 00 112223333333 2 23566777777888889999998877
Q ss_pred CCc---c--ceEEEeecCCCcccccccccchHHHHHH-----------HHHHHHHH-HHhcCcEEEeeeeEC-CEEEEEE
Q 048643 411 RVS---P--SAVMDKLKPKYENCHSQQLVTEEEAINE-----------FNRELLES-INASGKAYMTHAVCG-GIYAMRF 472 (506)
Q Consensus 411 ~~~---p--~~v~f~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~l~~~-l~~~g~~~~~~~~~~-g~~~lR~ 472 (506)
++. | +.+.|--.+...............+... ...++... +.+.|+.++.+..+. ....+|+
T Consensus 327 ~~~~~~p~gg~~~w~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~~~~~~~Rl 406 (433)
T PRK06855 327 GLKVNRTNGAFYMTVVFEDGVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFCTELNGFRV 406 (433)
T ss_pred CeeccCCCeeEEEeeccccccccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCCCCCCceEE
Confidence 765 5 3433322221100000000000000000 02234433 445676555544442 2345999
Q ss_pred EecCCCCCHHHHHHHHHHHHHHHHHHH
Q 048643 473 AVGATLTEERHVMVAWTMVQEQLEAFL 499 (506)
Q Consensus 473 ~~~~~~tt~edi~~li~~l~~~~~~l~ 499 (506)
++++ .++++|++.++.|.++.++..
T Consensus 407 s~~~--~~~~~i~~~~~~l~~~~~~~~ 431 (433)
T PRK06855 407 TLLE--RDEEKFEWIYQTLAEKIEEYL 431 (433)
T ss_pred EECC--CcHHHHHHHHHHHHHHHHHHh
Confidence 9965 467899999999998887643
No 181
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.73 E-value=3.6e-15 Score=151.70 Aligned_cols=285 Identities=12% Similarity=0.095 Sum_probs=184.2
Q ss_pred hhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHH
Q 048643 128 PAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKA 207 (506)
Q Consensus 128 p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka 207 (506)
+...++.++ +++.++++.+ ..++|+|+++++..++.+. . ++ .|++...++..+..+
T Consensus 54 ~~~~~lr~~----ia~~~~~~~~-------~i~it~Ga~~~l~~~~~~~-~-----------~~-~v~i~~P~y~~~~~~ 109 (354)
T PRK06358 54 PDYLELRKR----IASFEQLDLE-------NVILGNGATELIFNIVKVT-K-----------PK-KVLILAPTFAEYERA 109 (354)
T ss_pred ccHHHHHHH----HHHHhCCChh-------hEEECCCHHHHHHHHHHHh-C-----------CC-cEEEecCChHHHHHH
Confidence 334455544 5555577654 7899999988876655432 1 22 466788888888999
Q ss_pred HHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC---hhHHHHHHHHhCCEEEe
Q 048643 208 AQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP---LKPLCDVAKQFGIWVHV 284 (506)
Q Consensus 208 ~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp---l~~I~~ia~~~g~~lhV 284 (506)
++..|. +++.+|++.++++.+| +.+.+.+.+. +.+|+++.++|+||.+-+ +.+|+++|++|++|+++
T Consensus 110 ~~~~g~---~~~~~~~~~~~~~~~d-~~~~~~~~~~------~~~v~~~~P~NPtG~~~~~~~~~~l~~~a~~~~~~ii~ 179 (354)
T PRK06358 110 LKAFDA---EIEYAELTEETNFAAN-EIVLEEIKEE------IDLVFLCNPNNPTGQLISKEEMKKILDKCEKRNIYLII 179 (354)
T ss_pred HHHcCC---eeEEEeCccccCCCcc-HHHHHhhccC------CCEEEEeCCCCCCCCccCHHHHHHHHHHHHhcCCEEEE
Confidence 999999 9999999755457899 6665555332 346777899999999965 88888899999999999
Q ss_pred ecccccccccCccchhhhcCCCCCC--eeEEcCccccC-CCCcceEEEEeCchhHHhhhcC-CccccCCccccCCCccCC
Q 048643 285 DAAYAGSACICPEFQHFIDGVEGAD--SFSLNAHKWFF-TTLDCCCLWVKDPSALVSSLST-NPEYLKNKATESKQVVDY 360 (506)
Q Consensus 285 DaA~gg~~~~~~~~~~~~~gi~~aD--si~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~ 360 (506)
|.+|..+.. .+.....+..+...+ .+..++.|.++ ....+|+++..++... ..+.. ...+
T Consensus 180 De~Y~~~~~-~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~~~~~~-~~~~~~~~~~-------------- 243 (354)
T PRK06358 180 DEAFMDFLE-ENETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTSNKNLA-EKLLQMREPW-------------- 243 (354)
T ss_pred eCcccccCC-CccchhHHHhccCCCCEEEEEechhhccCcchhheeeecCCHHHH-HHHHHhCCCC--------------
Confidence 999965442 111111111121111 34567889998 5677998877554332 22211 1100
Q ss_pred CCccccCCCCCCchHHHHHHHHhch-hHHHHHHHHHHHHHHHHHHHHHcCCCCc---c--ceEEEeecCCCccccccccc
Q 048643 361 KDWQITLSRRFRSLKLWLVIRNYGV-ANLRHFLRSHVNMAKLFERLVASDKRVS---P--SAVMDKLKPKYENCHSQQLV 434 (506)
Q Consensus 361 ~~~~~~~sr~~~al~~~~~l~~~G~-~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p--~~v~f~~~~~~~~~~~~~~~ 434 (506)
+ ...+..+++...+.. +.+.++++...+..+.+.+.|++.++++ | +.+.+++.+
T Consensus 244 ---~------~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~g~f~~~~~~~----------- 303 (354)
T PRK06358 244 ---S------INTFADLAGQTLLDDKEYIKKTIQWIKEEKDFLYNGLSEFKGIKVYKPSVNFIFFKLEK----------- 303 (354)
T ss_pred ---c------chHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCCcceEEEEEcCc-----------
Confidence 0 122333344444433 3347777888888999999999887766 4 544444321
Q ss_pred chHHHHHHHHHHHHHHHHhcCcEEEeeeeEC--CEEEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 048643 435 TEEEAINEFNRELLESINASGKAYMTHAVCG--GIYAMRFAVGATLTEERHVMVAWTMVQEQL 495 (506)
Q Consensus 435 ~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--g~~~lR~~~~~~~tt~edi~~li~~l~~~~ 495 (506)
..++.+++.+.|+.......+. +..++|+++. +.++.++++++|+++.
T Consensus 304 ---------~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRls~~----~~~~~~~l~~~l~~~~ 353 (354)
T PRK06358 304 ---------PIDLRKELLKKGILIRSCSNYRGLDENYYRVAVK----SREDNKKLLKALEVIL 353 (354)
T ss_pred ---------hHHHHHHHHHCCeEEEECCCCCCCCCCEEEEEeC----CHHHHHHHHHHHHHHh
Confidence 1456777777786544443332 3468999984 5679999999998764
No 182
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.73 E-value=7.5e-16 Score=158.20 Aligned_cols=217 Identities=19% Similarity=0.222 Sum_probs=152.0
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHH
Q 048643 126 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQ 205 (506)
Q Consensus 126 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 205 (506)
..|...++|+ .++++.|.+. .+++++|+.|+..++. ... ++..|+++...|.+..
T Consensus 52 ~~p~~~~le~----~lA~l~g~~~---------~v~~~sG~~ai~~~l~-~l~-----------~Gd~Vlv~~~~y~~~~ 106 (390)
T PRK08064 52 GNPTREALED----IIAELEGGTK---------GFAFASGMAAISTAFL-LLS-----------KGDHVLISEDVYGGTY 106 (390)
T ss_pred CChhHHHHHH----HHHHHhCCCC---------eEEECCHHHHHHHHHH-HhC-----------CCCEEEEccCccchHH
Confidence 4566666665 5777777653 3666777766654442 211 4556777888776433
Q ss_pred ----HHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCE
Q 048643 206 ----KAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIW 281 (506)
Q Consensus 206 ----ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~ 281 (506)
+.++..|+ +++.++.+ |++++++++++.+ .+|+++.++|++|.+.|+++|+++|+++|++
T Consensus 107 ~~~~~~~~~~G~---~v~~v~~~-------d~~~l~~~l~~~t------klV~l~~p~NptG~~~dl~~I~~la~~~g~~ 170 (390)
T PRK08064 107 RMITEVLSRFGI---EHTFVDMT-------NLEEVAQNIKPNT------KLFYVETPSNPLLKVTDIRGVVKLAKAIGCL 170 (390)
T ss_pred HHHHHHHHHcCC---EEEEECCC-------CHHHHHHhcCCCc------eEEEEECCCCCCcEeccHHHHHHHHHHcCCE
Confidence 45566788 89888753 6888988886544 3889999999999999999999999999999
Q ss_pred EEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCc--ceEEEEeCchhHHhhhcCCccccCCccccCCCccC
Q 048643 282 VHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLD--CCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVD 359 (506)
Q Consensus 282 lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 359 (506)
++||++|+.+....+. . -++|.++.++|||++.|.+ .|++++++++... .+.. +..
T Consensus 171 vvvD~a~~~~~~~~~~-~------~g~Divv~S~tK~~~G~~~~laG~~v~~~~~~~~-~l~~----~~~---------- 228 (390)
T PRK08064 171 TFVDNTFLTPLLQKPL-D------LGADVVLHSATKFLAGHSDVLAGLAVVKDEELAQ-KLYF----LQN---------- 228 (390)
T ss_pred EEEECCCCcccccCch-h------hCCcEEEeecceeccCCccceeEEEEeCCHHHHH-HHHH----HHH----------
Confidence 9999999765543221 1 1689999999999998876 5878877654432 2210 000
Q ss_pred CCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc
Q 048643 360 YKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS 413 (506)
Q Consensus 360 ~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~ 413 (506)
..+....+...|..++ |.+-+..++++..+++..+.+.|+++|.+.
T Consensus 229 ------~~g~~~~~~~a~l~~~--gl~tl~~R~~~~~~~a~~la~~L~~~~~v~ 274 (390)
T PRK08064 229 ------SFGAVLGVQDCWLVLR--GLKTLHVRLEHSSETANKIALYLQEHPKVQ 274 (390)
T ss_pred ------hcCCCCCHHHHHHHHc--ccCcHHHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 0111123445666553 556678899999999999999999887654
No 183
>PRK07683 aminotransferase A; Validated
Probab=99.73 E-value=3.5e-15 Score=153.62 Aligned_cols=321 Identities=11% Similarity=0.071 Sum_probs=203.4
Q ss_pred HHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCC-cEEEcCCchHHHHHHHHHHHHHHHHhhc
Q 048643 107 GFLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNG-GGVIQGTTCEAILCTLTAARDRVLNKIG 185 (506)
Q Consensus 107 ~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~-~g~~t~ggt~a~l~al~~ar~~~~~~~~ 185 (506)
..+.+.+...+......|...++..++++++.+|+.+.+|.+.+. . ..++|+|+++|+..++.+...
T Consensus 44 ~~~~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~-----~~~I~~t~G~~~al~~~~~~l~~------- 111 (387)
T PRK07683 44 SHVKEAAKRAITENYTSYTHNAGLLELRKAACNFVKDKYDLHYSP-----ESEIIVTIGASEAIDIAFRTILE------- 111 (387)
T ss_pred HHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC-----CCcEEEeCChHHHHHHHHHHhCC-------
Confidence 344555555555444556666678899999999998887875331 2 689999999988766654322
Q ss_pred ccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc
Q 048643 186 RENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV 265 (506)
Q Consensus 186 ~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i 265 (506)
++..|+++...+..+..+++.+|+ +++.+|.+.+ ++.+|++.|++.+.+. +.+|+++.++|+||.+
T Consensus 112 ----~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~~-~~~~~~~~l~~~~~~~------~~~i~i~~p~NPtG~~ 177 (387)
T PRK07683 112 ----PGTEVILPAPIYPGYEPIIRLCGA---KPVFIDTRST-GFRLTAEALENAITEK------TRCVVLPYPSNPTGVT 177 (387)
T ss_pred ----CCCEEEEcCCCccchHHHHHHcCC---EEEEeecCcc-cCCCCHHHHHHhcCcC------ceEEEEeCCCCCCCcC
Confidence 456788888888888888999999 9999998753 4788999999887653 3367888999999998
Q ss_pred ---cChhHHHHHHHHhCCEEEeecccccccccCccchhhhc--CCCCCCeeEEcCccccCCC-CcceEEEEeCchhHHhh
Q 048643 266 ---DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFID--GVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSALVSS 339 (506)
Q Consensus 266 ---dpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~--gi~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~ 339 (506)
+++++|+++|+++|+++++|++|..+... +....... +...-..+..++.|.++.| .-+|+++... .. .+.
T Consensus 178 ~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~-~~~~~~~~~~~~~~~vi~~~s~SK~~~~pGlRiG~i~~~~-~l-~~~ 254 (387)
T PRK07683 178 LSKEELQDIADVLKDKNIFVLSDEIYSELVYE-QPHTSIAHFPEMREKTIVINGLSKSHSMTGWRIGFLFAPS-YL-AKH 254 (387)
T ss_pred CCHHHHHHHHHHHHHcCeEEEEecccccceeC-CCcCChhhccCCcCCeEEEeeccccccCccceeEEEEcCH-HH-HHH
Confidence 45899999999999999999999765432 11111111 1111235567789999854 5578877643 22 222
Q ss_pred hcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHH--hchhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c
Q 048643 340 LSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRN--YGVANLRHFLRSHVNMAKLFERLVASDKRVS---P 414 (506)
Q Consensus 340 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~--~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p 414 (506)
+.....|... +. ..+...++... .|...+++..++..+.++++.+.|.+. ++. |
T Consensus 255 ~~~~~~~~~~-----------------~~---~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~ 313 (387)
T PRK07683 255 ILKVHQYNVT-----------------CA---SSISQYAALEALTAGKDDAKMMRHQYKKRRDYVYNRLISM-GLDVEKP 313 (387)
T ss_pred HHHHHHhccC-----------------CC---ChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHc-CCcccCC
Confidence 2211111110 00 11111122222 244456666777788888999999876 565 4
Q ss_pred --ceEEEeecCC-CcccccccccchHHHHHHHHHHHHHH-HHhcCcEEEeeeeE--CCEEEEEEEecCCCCCHHHHHHHH
Q 048643 415 --SAVMDKLKPK-YENCHSQQLVTEEEAINEFNRELLES-INASGKAYMTHAVC--GGIYAMRFAVGATLTEERHVMVAW 488 (506)
Q Consensus 415 --~~v~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~-l~~~g~~~~~~~~~--~g~~~lR~~~~~~~tt~edi~~li 488 (506)
+.+.+...+. .. + ..++... +.+.|+.+..+..+ .+..++|++++. +++++.+.+
T Consensus 314 ~~~~~~~~~~~~~~~--------------~--~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~Ri~~~~---~~~~~~~al 374 (387)
T PRK07683 314 TGAFYLFPSIGHFTM--------------S--SFDFALDLVEEAGLAVVPGSAFSEYGEGYVRLSYAY---SIETLKEGL 374 (387)
T ss_pred CeeEEEEEecccCCC--------------C--HHHHHHHHHHhCCEEEcCchhhCCCCCCeEEEEecC---CHHHHHHHH
Confidence 4444432221 00 0 1233333 34557654443332 235799999963 577888888
Q ss_pred HHHHHHHH
Q 048643 489 TMVQEQLE 496 (506)
Q Consensus 489 ~~l~~~~~ 496 (506)
+.|.++.+
T Consensus 375 ~~l~~~l~ 382 (387)
T PRK07683 375 DRLEAFLQ 382 (387)
T ss_pred HHHHHHHH
Confidence 88877654
No 184
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.73 E-value=2e-15 Score=157.48 Aligned_cols=315 Identities=12% Similarity=0.092 Sum_probs=200.4
Q ss_pred hhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHH
Q 048643 128 PAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKA 207 (506)
Q Consensus 128 p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka 207 (506)
.+...+.+.+.+++.+.+|..... .....++|+|+++++...+.+..+ ++..|+++...+..+...
T Consensus 95 ~G~~~LR~aiA~~l~~~~~~~~~v---~p~~Ivit~G~t~al~~l~~~l~~-----------pGD~Vlv~~P~Y~~f~~~ 160 (447)
T PLN02607 95 HGLKSFRQAMASFMEQIRGGKARF---DPDRIVLTAGATAANELLTFILAD-----------PGDALLVPTPYYPGFDRD 160 (447)
T ss_pred cchHHHHHHHHHHHHHhcCCCCCc---CHHHeEEcCChHHHHHHHHHHhCC-----------CCCEEEEcCCCCcchHHH
Confidence 345778889999999887732111 012788999999887665544332 667788898998888877
Q ss_pred HH-HhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC---hhHHHHHHHHhCCEEE
Q 048643 208 AQ-IVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP---LKPLCDVAKQFGIWVH 283 (506)
Q Consensus 208 ~~-~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp---l~~I~~ia~~~g~~lh 283 (506)
+. ..|+ +++.|+++.++++.+|+++|++++++..+.|.++.+|+++.++|++|.+-+ +++|.++|++||++++
T Consensus 161 ~~~~~g~---~vv~v~~~~~~~f~~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI 237 (447)
T PLN02607 161 LRWRTGV---KIVPIHCDSSNNFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLV 237 (447)
T ss_pred HHhcCCc---EEEEEeCCCCCCCcCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEE
Confidence 76 4688 999999876556789999999999987777777778888999999999865 7889999999999999
Q ss_pred eecccccccccCccch---hhhcCC------CCCCeeEEcCccccC-CCCcceEEEEeCchhHHhhhcCCccccCCcccc
Q 048643 284 VDAAYAGSACICPEFQ---HFIDGV------EGADSFSLNAHKWFF-TTLDCCCLWVKDPSALVSSLSTNPEYLKNKATE 353 (506)
Q Consensus 284 VDaA~gg~~~~~~~~~---~~~~gi------~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~ 353 (506)
+|.+|+....-.+.+. .....+ +++ -+..+..|-++ ..+.+|+++..++... .++.....|..
T Consensus 238 ~DEiYa~~~f~~~~f~S~~s~~~~~~~~~~~~~v-~vi~s~SK~fg~~GlRvG~ivs~n~~l~-~~~~~~~~~~~----- 310 (447)
T PLN02607 238 SDEIYSGSVFSASEFVSVAEIVEARGYKGVAERV-HIVYSLSKDLGLPGFRVGTIYSYNDKVV-TTARRMSSFTL----- 310 (447)
T ss_pred EeccccccccCCCCcccHHHHHhhcCCCCCcCcE-EEEEcchhcCCCCcceEEEEEEcCHHHH-HHHHHHhhcCC-----
Confidence 9999987543221121 111111 112 24567889987 5577898887655432 22221111110
Q ss_pred CCCccCCCCccccCCCCCCchHHHHHHHHhch-----hHHHHHHHHHHHHHHHHHHHHHcCCCCc---c---ceEEEeec
Q 048643 354 SKQVVDYKDWQITLSRRFRSLKLWLVIRNYGV-----ANLRHFLRSHVNMAKLFERLVASDKRVS---P---SAVMDKLK 422 (506)
Q Consensus 354 ~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~-----~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p---~~v~f~~~ 422 (506)
.+ .+.-.+....+.. .-+.+..++..+..+.+.+.|++. +++ | ..+.+++.
T Consensus 311 -------------~s----~~~q~~~~~~L~d~~~~~~~l~~~r~~l~~~~~~~~~~L~~~-gi~~~~~~ag~fvw~~L~ 372 (447)
T PLN02607 311 -------------VS----SQTQHLLASMLSDEEFTENYIRTNRERLRKRYEMIVQGLRRA-GIECLKGNAGLFCWMNLS 372 (447)
T ss_pred -------------CC----HHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCcccCCeeEEEEEEch
Confidence 00 1111222222222 223445556666777888888876 565 4 33444442
Q ss_pred CCCcccccccccchHHHHHHHHHHHHHHHHh-cCcEEEeeee-EC--CEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 048643 423 PKYENCHSQQLVTEEEAINEFNRELLESINA-SGKAYMTHAV-CG--GIYAMRFAVGATLTEERHVMVAWTMVQEQLEAF 498 (506)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~-~~--g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l 498 (506)
.. .. ..+ .+...++.+++.+ .|+ .+.++. +. ..+++|+++++ .++++++..++.|.++.++-
T Consensus 373 ~~-~~------~~~----~~~e~~l~~~ll~~~gV-~v~pG~~f~~~~~g~fRi~fa~--~~~~~l~~gl~Ri~~~l~~~ 438 (447)
T PLN02607 373 PL-LE------TPT----REGELALWDSILREVKL-NISPGSSCHCSEPGWFRVCFAN--MSEDTLEVALKRIHRFMDRR 438 (447)
T ss_pred Hh-hc------CCC----chhHHHHHHHHHHhCCE-EEcCccccCCCCCCEEEEEecc--CCHHHHHHHHHHHHHHHHHH
Confidence 21 00 000 0112356666655 465 455543 32 36899999965 35778999998888876543
No 185
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.73 E-value=4e-15 Score=153.31 Aligned_cols=320 Identities=11% Similarity=0.022 Sum_probs=199.0
Q ss_pred HHHHHHhhcC-CCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCC-cEEEcCCchHHHHHHHHHHHHHHHHhhcc
Q 048643 109 LGEMLSSGFN-VVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNG-GGVIQGTTCEAILCTLTAARDRVLNKIGR 186 (506)
Q Consensus 109 ~~~~l~~~~n-~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~-~g~~t~ggt~a~l~al~~ar~~~~~~~~~ 186 (506)
+.+.+...+. .....|...++..++.+++.+|+.+..|.+.+. . ..++|+|+++++..++.+..+
T Consensus 48 ~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~-----~~~I~it~Gs~~al~~~~~~l~~-------- 114 (388)
T PRK07366 48 ALEAIAQSLHDPSTHGYLLFHGTLDFREAAAQWYEQRFGLAVDP-----ETEVLPLIGSQEGTAHLPLAVLN-------- 114 (388)
T ss_pred HHHHHHHHHhCcccCCCCCCCCCHHHHHHHHHHHHHhhCCcCCC-----cCeEEECCCcHHHHHHHHHHhCC--------
Confidence 3444444332 223346555667889999999999888865432 2 477788888888766554332
Q ss_pred cCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCccc
Q 048643 187 ENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVD 266 (506)
Q Consensus 187 ~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~id 266 (506)
++..|++...++......++..|. +++.||+++++++.+|++++++.+.+. +.+|+++.++|+||.+-
T Consensus 115 ---~gd~Vlv~~P~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~~~~~------~k~i~l~~p~NPTG~~~ 182 (388)
T PRK07366 115 ---PGDFALLLDPGYPSHAGGVYLAGG---QIYPMPLRAENDFLPVFADIPTEVLAQ------ARLMVLSYPHNPTTAIA 182 (388)
T ss_pred ---CCCEEEEcCCCCcchHHHHHhcCC---EEEEEECCCccCCCCCHHHHHHhhccc------ceEEEEeCCCCCCCccC
Confidence 566788889999999999999999 999999986555788999998776543 33677778999999995
Q ss_pred C---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCC-C--eeEEcCccccC-CCCcceEEEEeCchhHHhh
Q 048643 267 P---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGA-D--SFSLNAHKWFF-TTLDCCCLWVKDPSALVSS 339 (506)
Q Consensus 267 p---l~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~a-D--si~~~~hK~l~-~p~~~g~~~~r~~~~l~~~ 339 (506)
+ +++|+++|++||+|+++|.+|+-+..-.......+..+... + .+..++.|.++ ...-+|+++. ++..+ +.
T Consensus 183 s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~-~~~li-~~ 260 (388)
T PRK07366 183 PLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLSKSYNMGGFRIGFAIG-NAQLI-QA 260 (388)
T ss_pred CHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeecccccCCcchhheehcC-CHHHH-HH
Confidence 4 67788899999999999999976543111101111112111 2 34567899996 4477888764 33332 22
Q ss_pred hcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHh--chhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c
Q 048643 340 LSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNY--GVANLRHFLRSHVNMAKLFERLVASDKRVS---P 414 (506)
Q Consensus 340 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p 414 (506)
+.....+.. +.. ...-...++..+ ..+.+++..+...+..+++.+.|++. ++. |
T Consensus 261 l~~~~~~~~----------------~~~----~~~~~~~a~~~l~~~~~~l~~~~~~~~~~r~~l~~~L~~~-~~~~~~p 319 (388)
T PRK07366 261 LRQVKAVVD----------------FNQ----YRGILNGAIAALTGPQATVQQTVQIFRQRRDAFINALHQI-GWPVPLP 319 (388)
T ss_pred HHHHHhhcc----------------cCC----CHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CCcccCC
Confidence 221111100 000 000111222222 24567777888888888999999887 565 5
Q ss_pred ---ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHH-hcCcEEEeeeeEC--CEEEEEEEecCCCCCHHHHHHHH
Q 048643 415 ---SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESIN-ASGKAYMTHAVCG--GIYAMRFAVGATLTEERHVMVAW 488 (506)
Q Consensus 415 ---~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lR~~~~~~~tt~edi~~li 488 (506)
..+.+++.+.- +....++.+.+. +.|+....+..+. +..++|++++. +++++++.+
T Consensus 320 ~~g~f~~~~~~~~~---------------~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~---~~~~l~~~l 381 (388)
T PRK07366 320 EATMYVWAKLPEPW---------------QGNSVEFCTQLVAQTGVAASPGSGFGKSGEGYVRFALVH---DPDILEEAV 381 (388)
T ss_pred CeeEEEEEECCccc---------------CCCHHHHHHHHHHhCCEEEeCchHhCcCCCCeEEEEecC---CHHHHHHHH
Confidence 34444443210 000234555553 4576544433332 24799999963 477888888
Q ss_pred HHHHHH
Q 048643 489 TMVQEQ 494 (506)
Q Consensus 489 ~~l~~~ 494 (506)
+.|.++
T Consensus 382 ~rl~~~ 387 (388)
T PRK07366 382 ERIAAF 387 (388)
T ss_pred HHHHHh
Confidence 887654
No 186
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.73 E-value=2.4e-15 Score=153.18 Aligned_cols=279 Identities=13% Similarity=0.100 Sum_probs=181.0
Q ss_pred HHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCCCC
Q 048643 137 VMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGIDLK 216 (506)
Q Consensus 137 ~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~ 216 (506)
+.+++++.+|.+... ..++|+|+++++..++.+..+ ++..|+++..++..+...++..|+
T Consensus 68 lr~~ia~~~~~~~~~------~I~~t~G~~~~i~~~~~~~~~-----------~gd~vlv~~P~y~~~~~~~~~~g~--- 127 (356)
T PRK04870 68 LKAALRAAMGVPAGA------DVLLGNGSDELIQLLALACAK-----------PGATVLAPEPGFVMYRMSAKLAGL--- 127 (356)
T ss_pred HHHHHHHHhCcCCCC------cEEEcCCHHHHHHHHHHHhcC-----------CCCEEEECCCCHHHHHHHHHHcCC---
Confidence 345566666765421 577888777766555443322 566788899999999999999999
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecccccccccCc
Q 048643 217 NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICP 296 (506)
Q Consensus 217 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~ 296 (506)
+++.+|+++ ++.+|++.|++++.+.. +.+|+++.++|+||.+-+.+++.++++..+.++++|++|..+.. .
T Consensus 128 ~~~~i~~~~--~~~~d~~~l~~~~~~~~-----~~~v~l~~p~NPtG~~~~~~~~~~i~~~~~~~ii~De~y~~~~~--~ 198 (356)
T PRK04870 128 EFVGVPLTA--DFTLDLPAMLAAIAEHR-----PALVFLAYPNNPTGNLFDDADVERIIEAAPGLVVVDEAYQPFAG--D 198 (356)
T ss_pred EEEEecCCC--CCCCCHHHHHHHhhcCC-----CCEEEEcCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCchhhcC--c
Confidence 999999874 57999999999986421 33677788999999999988888888877899999999965321 1
Q ss_pred cchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcC-CccccCCccccCCCccCCCCccccCCCCCCchH
Q 048643 297 EFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLST-NPEYLKNKATESKQVVDYKDWQITLSRRFRSLK 375 (506)
Q Consensus 297 ~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~ 375 (506)
.....+...++ -.+..++.|++.....+|+++... ..+ +.+.. ...| . ...+.
T Consensus 199 ~~~~~~~~~~~-vi~~~S~SK~~~~GlRiG~~i~~~-~~i-~~~~~~~~~~-----------------~------~~~~~ 252 (356)
T PRK04870 199 SWLPRLARFPN-LLVMRTVSKLGLAGLRLGYLAGHP-AWI-AELDKVRPPY-----------------N------VNVLT 252 (356)
T ss_pred chHHHHhhCCC-EEEEecchhhhhHHHhhhhhhCCH-HHH-HHHHHccCCC-----------------c------CCHHH
Confidence 11111221112 245666889543445578776543 222 22221 1000 0 01122
Q ss_pred HHHHHHHhc-hhHHHHHHHHHHHHHHHHHHHHHcCCCCc--c---ceEEEeecCCCcccccccccchHHHHHHHHHHHHH
Q 048643 376 LWLVIRNYG-VANLRHFLRSHVNMAKLFERLVASDKRVS--P---SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLE 449 (506)
Q Consensus 376 ~~~~l~~~G-~~g~~~~i~~~~~~a~~l~~~l~~~~~~~--p---~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 449 (506)
..++...+. .+.+++.+++..++++++.+.|++.+++. | +.+.+++. . ..++.+
T Consensus 253 q~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~-~-------------------~~~~~~ 312 (356)
T PRK04870 253 QATALFALEHVDVLDAQAAQLRAERTRLAAALAALPGVTVFPSAANFILVRVP-D-------------------AAAVFD 312 (356)
T ss_pred HHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEECCCCCeEEEEECC-C-------------------HHHHHH
Confidence 222222221 23477788888889999999999887877 4 55555543 2 245666
Q ss_pred HHHhcCcEEEeeeeEC--CEEEEEEEecCCCCCHHHHHHHHHHHHHH
Q 048643 450 SINASGKAYMTHAVCG--GIYAMRFAVGATLTEERHVMVAWTMVQEQ 494 (506)
Q Consensus 450 ~l~~~g~~~~~~~~~~--g~~~lR~~~~~~~tt~edi~~li~~l~~~ 494 (506)
.+.++|+.......+. +..++|+++. +.+++++++++|+++
T Consensus 313 ~l~~~gI~v~~~~~f~~~~~~~iRis~~----~~~~~~~l~~al~~~ 355 (356)
T PRK04870 313 GLKTRGVLVKNLSGMHPLLANCLRVTVG----TPEENAQFLAALKAA 355 (356)
T ss_pred HHHHCCEEEEECCCCCCCCCCeEEEeCC----CHHHHHHHHHHHHHh
Confidence 7777787543333222 3579999985 567999999999864
No 187
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.73 E-value=5.7e-15 Score=152.44 Aligned_cols=322 Identities=12% Similarity=0.042 Sum_probs=197.3
Q ss_pred HHHHHHHHHhhcCCC---CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHH
Q 048643 106 AGFLGEMLSSGFNVV---GFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLN 182 (506)
Q Consensus 106 ~~~~~~~l~~~~n~~---~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~ 182 (506)
+..+.+.+...++.. ...|....+...+.+.+.+|+.+.++.+.+. ...++|+|+++++..++.....
T Consensus 48 ~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~-----~~i~~t~G~~~al~~~~~~l~~---- 118 (394)
T PRK06836 48 PAAVKEALRELAEEEDPGLHGYMPNAGYPEVREAIAESLNRRFGTPLTA-----DHIVMTCGAAGALNVALKAILN---- 118 (394)
T ss_pred CHHHHHHHHHHHhcCCcCcccCCCCCCCHHHHHHHHHHHHHHhCCCCCc-----CcEEEeCChHHHHHHHHHHhcC----
Confidence 344555555444321 3345455667888888889988876653221 2688999988887666554422
Q ss_pred hhcccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCC
Q 048643 183 KIGRENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAI 262 (506)
Q Consensus 183 ~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~t 262 (506)
++..|+++..++..+...++..|+ +++.+|++++ ++.+|+++|++++++. +.+|+++.++|+|
T Consensus 119 -------~gd~Vli~~p~~~~~~~~~~~~g~---~v~~v~~~~~-~~~~d~~~l~~~~~~~------~~~v~~~~p~NPt 181 (394)
T PRK06836 119 -------PGDEVIVFAPYFVEYRFYVDNHGG---KLVVVPTDTD-TFQPDLDALEAAITPK------TKAVIINSPNNPT 181 (394)
T ss_pred -------CCCEEEEcCCCCccHHHHHHHcCC---EEEEEecCCc-cCcCCHHHHHhhcCcC------ceEEEEeCCCCCC
Confidence 556788888999888888899999 9999999764 4789999999998654 3367788899999
Q ss_pred CcccC---hhHHHHHHHH------hCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCC-CCcceEEEEeC
Q 048643 263 TAVDP---LKPLCDVAKQ------FGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFT-TLDCCCLWVKD 332 (506)
Q Consensus 263 G~idp---l~~I~~ia~~------~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~-p~~~g~~~~r~ 332 (506)
|.+-| +++|+++|++ ||+|+++|.+|.....-........... .-..+..++.|.++. ...+|+++..+
T Consensus 182 G~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~-~~~i~~~S~SK~~~~pGlRiG~~~~~~ 260 (394)
T PRK06836 182 GVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPYIFKYY-DNSIVVYSFSKSLSLPGERIGYIAVNP 260 (394)
T ss_pred CcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCCCCCChHHcc-CcEEEEecchhhccCcceeeEEEecCH
Confidence 99966 6777778898 8999999999976432111111111111 123556778999984 46788888754
Q ss_pred chh----HHhhhcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHc
Q 048643 333 PSA----LVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVAS 408 (506)
Q Consensus 333 ~~~----l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~ 408 (506)
... +...+.....+.. . -....+...+..+.+. ++. ...+..+..+.+.+.|++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~------------------~-~~~~~~~q~~~~~~l~-~~~--~~~~~~~~r~~l~~~L~~ 318 (394)
T PRK06836 261 EMEDADDLVAALVFANRILG------------------F-VNAPALMQRVVAKCLD-ATV--DVSIYKRNRDLLYDGLTE 318 (394)
T ss_pred HHhhhHHHHHHHHHHhhccc------------------c-ccCCHHHHHHHHHHhC-ChH--HHHHHHHHHHHHHHHHHh
Confidence 321 0111100000000 0 0001111122222222 221 133455567778888887
Q ss_pred CCCCc---c--ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHH
Q 048643 409 DKRVS---P--SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERH 483 (506)
Q Consensus 409 ~~~~~---p--~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~ed 483 (506)
. +++ | +.+.|.-.+.. + ..++.+.+.+.|+.+.....+....++|++++ .++++
T Consensus 319 ~-g~~~~~~~gg~~~~~~~~~~---------------~--~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~~~---~~~~~ 377 (394)
T PRK06836 319 L-GFECVKPQGAFYLFPKSPEE---------------D--DVAFCEKAKKHNLLLVPGSGFGCPGYFRLSYC---VDTET 377 (394)
T ss_pred C-CCEeecCCceEEEEEeCCCC---------------C--HHHHHHHHHhCCEEEECchhcCCCCeEEEEec---CCHHH
Confidence 7 666 4 33333222210 0 23455666677875544433333468999996 36779
Q ss_pred HHHHHHHHHHHHHH
Q 048643 484 VMVAWTMVQEQLEA 497 (506)
Q Consensus 484 i~~li~~l~~~~~~ 497 (506)
++..++.|+++.++
T Consensus 378 ~~~~i~~l~~~l~~ 391 (394)
T PRK06836 378 IERSLPAFEKLAKE 391 (394)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999888887653
No 188
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.73 E-value=1.2e-15 Score=156.72 Aligned_cols=218 Identities=16% Similarity=0.129 Sum_probs=156.4
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHH
Q 048643 126 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQ 205 (506)
Q Consensus 126 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 205 (506)
..|...++|+ .++++.|.+ .+++++||++|+..++.+... ++..|+++...|.+..
T Consensus 63 ~~pt~~~Le~----~lA~l~g~~---------~~l~~~sgt~Ai~~~l~al~~-----------~GD~Vl~~~~~y~~~~ 118 (394)
T PRK07050 63 ATPTSLALAQ----RLAEIEGGR---------HALLQPSGLAAISLVYFGLVK-----------AGDDVLIPDNAYGPNR 118 (394)
T ss_pred CCHHHHHHHH----HHHHHhCCC---------eEEEeccHHHHHHHHHHHHhC-----------CCCEEEEecCCcccHH
Confidence 4555556654 577777753 578999999999888876532 6677888888887654
Q ss_pred ----HHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCE
Q 048643 206 ----KAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIW 281 (506)
Q Consensus 206 ----ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~ 281 (506)
..+...|+ +++.++.. +.+.|+++|++.+ .+|+++.++|++|.+.|+++|+++|+++|++
T Consensus 119 ~~~~~~~~~~Gi---~v~~vd~~-------~~~~l~~~i~~~t------klV~le~p~Np~~~~~di~~I~~ia~~~gi~ 182 (394)
T PRK07050 119 DHGEWLARDFGI---TVRFYDPL-------IGAGIADLIQPNT------RLIWLEAPGSVTMEVPDVPAITAAARARGVV 182 (394)
T ss_pred HHHHHHHHhcCe---EEEEECCC-------CHHHHHHhcCCCC------eEEEEECCCCCCccHhhHHHHHHHHHHcCCE
Confidence 35567788 88887642 4467888776543 4888999999999999999999999999999
Q ss_pred EEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCc--ceEEEEeCchhHHhhhcCCccccCCccccCCCccC
Q 048643 282 VHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLD--CCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVD 359 (506)
Q Consensus 282 lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 359 (506)
+++|++|+.+....+ +-. ++|.++.+.+|+++...+ .|++++++++...+ +.....++
T Consensus 183 livD~a~a~~~~~~~----l~~---GaDi~v~S~tK~~~g~~~~~gG~v~~~~~~~~~~-~~~~~~~~------------ 242 (394)
T PRK07050 183 TAIDNTYSAGLAFKP----FEH---GVDISVQALTKYQSGGSDVLMGATITADAELHAK-LKLARMRL------------ 242 (394)
T ss_pred EEEECCcccccccCH----HHc---CCeEEEEECCceecCCCCeeEEEEEECCHHHHHH-HHHHHHhc------------
Confidence 999999977654322 111 689999999999986654 56677776654322 21100011
Q ss_pred CCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc
Q 048643 360 YKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS 413 (506)
Q Consensus 360 ~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~ 413 (506)
+--..+...|.+++ |.+.+..++++..++|.++.+.|+++|.++
T Consensus 243 --------G~~~~~~~a~l~lr--~l~tl~~Rl~~~~~~a~~la~~L~~~p~v~ 286 (394)
T PRK07050 243 --------GIGVSADDCSLVLR--GLPSLQVRLAAHDRSALEVAEWLKARPEIA 286 (394)
T ss_pred --------CCCCCHHHHHHHHc--CCCcHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 11123455677776 456777899999999999999999887654
No 189
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=99.73 E-value=3.1e-15 Score=146.81 Aligned_cols=371 Identities=14% Similarity=0.098 Sum_probs=234.5
Q ss_pred ChhHHhhhCCCC-CCCCCCCHHHHHHHHHHHhcCCCCCCCCCCccccCCCCCCHHHHH-------HHHHHhhcCCCCccc
Q 048643 53 EPGYLRKRLPEC-APYNPESMETILQDVQEHIVPGVTHWQSPNYFAYFPSSGSIAGFL-------GEMLSSGFNVVGFNW 124 (506)
Q Consensus 53 ~p~~l~~~~~~~-~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-------~~~l~~~~n~~~~~~ 124 (506)
-|..++...... .+..+.++.+++.++.+....|. ..+.|.|--.-+.-.|+++ .+|+++ +.+++...
T Consensus 39 IP~~Ir~~~~~~~~~~~~~sE~e~l~~l~~ia~kN~---~~~sfiG~GyY~~~~P~vI~rnile~pewyTa-YTPYQpEI 114 (450)
T COG0403 39 IPPSIRKKLDTLLPLPKPLSEYEALAELKEIASKNK---VFTSFIGAGYYDTYTPPVILRNILENPEWYTA-YTPYQPEI 114 (450)
T ss_pred CCHHHHhcccccCCCCCCCCHHHHHHHHHHHHhcCc---hhhhhccCcccCCcCcHHHHHHhhcCcccccc-CCCCchhh
Confidence 355666542211 12235699999999999887775 4566776322223333333 345554 34555556
Q ss_pred ccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHH
Q 048643 125 ISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCAL 204 (506)
Q Consensus 125 ~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~ 204 (506)
.++.....+|.+ .++++|.|++.. +..+..++|.+--.++++-|..+ .++..++++...|+..
T Consensus 115 SQGrLqaLfefQ--tlv~dLTGm~VA-------NASm~DeaTAaAEAm~ma~r~~k--------~k~~~~~V~~~vhpqt 177 (450)
T COG0403 115 SQGRLEALFEFQ--TLVADLTGLDVA-------NASMLDEATAAAEAMLMAKRVTK--------KKRNKFLVPKDVHPQT 177 (450)
T ss_pred hhHHHHHHHHHH--HHHHHHhCCCcc-------cchhhhhHHHHHHHHHHHHHhhc--------CcCceEEecCCCCHHH
Confidence 678888889988 899999999987 67888888855544444434321 1356799999999988
Q ss_pred HHHHHHh--CCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCC-cccChhHHHHHHHHhCCE
Q 048643 205 QKAAQIV--GIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAIT-AVDPLKPLCDVAKQFGIW 281 (506)
Q Consensus 205 ~ka~~~~--G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG-~idpl~~I~~ia~~~g~~ 281 (506)
....+.. |+|. +++.++.+ |.+.|+++ .+. -.+.|++..+++ +| .+.++.+|.+++|++|..
T Consensus 178 ~~Vl~Tra~~~g~-~i~~~~~~-------d~~~l~~~-~~~-----~~~gv~vQyP~~-~G~~~~d~~~l~~~~h~~~al 242 (450)
T COG0403 178 LDVLRTRAEGLGI-EIEVVDAD-------DLDDLESA-DDG-----DVFGVLVQYPNT-FGIVEEDLRALIEAAHSAGAL 242 (450)
T ss_pred HHHHHhhcccCce-EEEEeccc-------hhhhhhhc-ccc-----CeEEEEEecCCC-CCccchhHHHHHHHHhhcCCE
Confidence 8777643 3311 55555543 77788877 331 135788888774 56 778899999999999998
Q ss_pred EEeecccccccccCccchhhhcCCCCCCeeEEcCccccC----CCCcceEEEEeCchhHHhhhcCCccccCCccccCCCc
Q 048643 282 VHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFF----TTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQV 357 (506)
Q Consensus 282 lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~----~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~ 357 (506)
+.|=+=--...++-|. .+. +||.+..+.+-++- ....+|++.+|++- ....|+-|.+...|..+.
T Consensus 243 ~~v~aDplaL~LL~pP-Ge~-----GADIvvG~~QrfGvPmgfGGPhag~fA~~~~~-----~R~mPGRlVG~S~D~~G~ 311 (450)
T COG0403 243 VIVAADPLALGLLKPP-GEF-----GADIVVGSAQRFGVPMGFGGPHAGYFAVKDEF-----KRQMPGRLVGVSVDAAGK 311 (450)
T ss_pred EEEEechhHhhccCCc-ccc-----CCceEEecCcccCCCcCCCCcceeeeeEhHhH-----hhcCCCceeeeeecCCCC
Confidence 8763211111122221 111 89999999998652 22338899888753 234566665544444444
Q ss_pred cCCCCcccc----CCCCCCc------------hHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCC-CCcc------
Q 048643 358 VDYKDWQIT----LSRRFRS------------LKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDK-RVSP------ 414 (506)
Q Consensus 358 ~~~~~~~~~----~sr~~~a------------l~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~-~~~p------ 414 (506)
..|. .++| .-||-.| +..-+++-.+|.+|++++.++..+++.+|+++|++.. ++++
T Consensus 312 ~A~r-LaLQTREQHIRReKATSNICTnQaLlA~~As~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~~g~~~~~~~fF 390 (450)
T COG0403 312 RAFR-LALQTREQHIRREKATSNICTNQALLALAASMYAVYHGPQGLKEIAERIHRLAAYLAAGLKEIGAGVELVFDHFF 390 (450)
T ss_pred chhh-hhHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhcCCceEeccccce
Confidence 3332 1222 3355333 2333445567999999999999999999999999653 4652
Q ss_pred ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHH
Q 048643 415 SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQ 494 (506)
Q Consensus 415 ~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~ 494 (506)
..+++++.. +.+..+.++....|.- +.. ... ..+=+++. ..++++||+.+++++...
T Consensus 391 dt~~v~~~~------------------~~~~~l~~~~~~~G~~-L~~--~~~-~~~~ia~t-Et~t~~~i~~l~~~~~~~ 447 (450)
T COG0403 391 DTFTVRVPE------------------EVAEALLAAAIAGGIN-LRR--VDA-DTVLIALT-ETTTKEDIDALVAAFGGV 447 (450)
T ss_pred eeEEEecch------------------hHHHHHHHHHHhcCCc-eee--ecC-CceEEEee-cccCHHHHHHHHHHHhhh
Confidence 556666531 3356667766666652 221 111 14566774 567788999999988764
No 190
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.73 E-value=1.8e-15 Score=156.95 Aligned_cols=237 Identities=15% Similarity=0.137 Sum_probs=158.3
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHH
Q 048643 126 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQ 205 (506)
Q Consensus 126 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 205 (506)
.+|....+|+ .++++.|.+ ..+++++|+.|+..++.+... ++..|+++...|....
T Consensus 61 ~~p~~~~le~----~lA~l~g~~---------~al~~~SG~~Ai~~al~all~-----------pGd~VIv~~~~y~~t~ 116 (427)
T PRK05994 61 TNPTNAVLEE----RVAALEGGT---------AALAVASGHAAQFLVFHTLLQ-----------PGDEFIAARKLYGGSI 116 (427)
T ss_pred CCccHHHHHH----HHHHHhCCC---------cEEEEcCHHHHHHHHHHHHhC-----------CCCEEEEecCcchhHH
Confidence 3455555665 577777765 358889999999877766533 5567778888887543
Q ss_pred ----HHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCE
Q 048643 206 ----KAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIW 281 (506)
Q Consensus 206 ----ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~ 281 (506)
..+...|+ +++.++.+ |+++++++|++.+ .+|+++.++|++|.+-|+++|+++|+++|++
T Consensus 117 ~~~~~~~~~~G~---~v~~vd~~-------d~~~l~~ai~~~t------klV~vesp~NptG~v~dl~~I~~la~~~gi~ 180 (427)
T PRK05994 117 NQFGHAFKSFGW---QVRWADAD-------DPASFERAITPRT------KAIFIESIANPGGTVTDIAAIAEVAHRAGLP 180 (427)
T ss_pred HHHHHHHHhcCc---EEEEECCC-------CHHHHHHhcCcCC------eEEEEECCCCCCCeecCHHHHHHHHHHcCCE
Confidence 34566788 88887642 7889999887543 3788899999999999999999999999999
Q ss_pred EEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCc-ceEEEEeCch-hHHhhhcCCccccCCccccCCCc--
Q 048643 282 VHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLD-CCCLWVKDPS-ALVSSLSTNPEYLKNKATESKQV-- 357 (506)
Q Consensus 282 lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~-~g~~~~r~~~-~l~~~~~~~~~yl~~~~~~~~~~-- 357 (506)
++||++|+.+....+ .. .++|.++.+.||+++.+-+ .|.+++.... .+. . ...-+++.......++.
T Consensus 181 livD~a~a~~~~~~p-l~------~gaDivv~S~tK~lgg~~~~~gG~v~~~~~~~~~-~-~k~~~~~~~~~~~~~~~~~ 251 (427)
T PRK05994 181 LIVDNTLASPYLIRP-IE------HGADIVVHSLTKFLGGHGNSMGGIIVDGGTFDWS-K-SGKYPMLSEPRPEYHGLVL 251 (427)
T ss_pred EEEECCccccccCCc-cc------cCCcEEEEcCccccCCCCCcEEEEEEeCCccccc-c-ccccccccCCcchhhhhhH
Confidence 999999986543322 11 2899999999999997754 4545553221 110 0 00111222110000000
Q ss_pred cC-CC----------CccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc
Q 048643 358 VD-YK----------DWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS 413 (506)
Q Consensus 358 ~~-~~----------~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~ 413 (506)
.+ +. ......+....++.+|..++ |.+.+..++++..++|.++.+.|+++|+++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~G~~~~~~~A~l~~~--~l~tL~~r~~~~~~~a~~la~~L~~~p~v~ 316 (427)
T PRK05994 252 HETFGNFAFAIAARVLGLRDLGPAISPFNAFLILT--GIETLPLRMQRHSDNALAVAEWLKGHPKVS 316 (427)
T ss_pred HHHhhhhhhHHHHHHHHHHhcCCCCCHHHHHHHHc--CcccHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 00 00 00011233455667777766 567889999999999999999999998765
No 191
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.72 E-value=1.4e-15 Score=156.84 Aligned_cols=218 Identities=18% Similarity=0.221 Sum_probs=154.0
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHH
Q 048643 126 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQ 205 (506)
Q Consensus 126 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 205 (506)
..|...++|+. +++++|.+ ..++++||+.|+..++.+... ++..|+++...|.+..
T Consensus 62 ~~p~~~~Le~~----iA~~~g~~---------~~l~~~sG~~Ai~~al~~ll~-----------~Gd~Vl~~~~~y~~~~ 117 (400)
T PRK06234 62 GNPTSTEVENK----LALLEGGE---------AAVVAASGMGAISSSLWSALK-----------AGDHVVASDTLYGCTF 117 (400)
T ss_pred CCccHHHHHHH----HHHHhCCC---------cEEEEcCHHHHHHHHHHHHhC-----------CCCEEEEecCccchHH
Confidence 56777888866 55666643 458889999888777654432 5566777877775433
Q ss_pred ----HHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHh--C
Q 048643 206 ----KAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQF--G 279 (506)
Q Consensus 206 ----ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~--g 279 (506)
..++..|+ +++.++.+ |+++|++++++.+ .+|+++.++|++|.+.|+++|+++|+++ |
T Consensus 118 ~~~~~~~~~~G~---~v~~vd~~-------d~e~l~~~i~~~t------klI~iesP~NPtG~v~dl~~I~~la~~~~~~ 181 (400)
T PRK06234 118 ALLNHGLTRYGV---EVTFVDTS-------NLEEVRNALKANT------KVVYLETPANPTLKVTDIKAISNIAHENNKE 181 (400)
T ss_pred HHHHHHHhhCCe---EEEEECCC-------CHHHHHHHhccCC------eEEEEECCCCCCCCcCCHHHHHHHHHhcCCC
Confidence 44567788 88888642 7899999987644 3788899999999999999999999997 9
Q ss_pred CEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCc--ceEEEEeCchhHHhhhcC-CccccCCccccCCC
Q 048643 280 IWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLD--CCCLWVKDPSALVSSLST-NPEYLKNKATESKQ 356 (506)
Q Consensus 280 ~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~-~~~yl~~~~~~~~~ 356 (506)
++++||++|+.+....+ . +. ++|.+..+++|+++.+-. .|+++.++ +.. +.+.. ...+.
T Consensus 182 i~livDea~~~~~~~~~-l-----~~-g~Divv~S~sK~l~g~g~~~gG~v~~~~-~~~-~~l~~~~~~~~--------- 243 (400)
T PRK06234 182 CLVFVDNTFCTPYIQRP-L-----QL-GADVVVHSATKYLNGHGDVIAGFVVGKE-EFI-NQVKLFGIKDM--------- 243 (400)
T ss_pred CEEEEECCCCchhcCCc-h-----hh-CCcEEEeeccccccCCCCceeEEEEecH-HHH-HHHHHHHHHHh---------
Confidence 99999999976644322 1 11 689999999999997653 47766654 332 22211 00000
Q ss_pred ccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc
Q 048643 357 VVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS 413 (506)
Q Consensus 357 ~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~ 413 (506)
.+-...+...|..++ |.+.+..++++..+++.++.+.|+++|.++
T Consensus 244 ----------~g~~l~p~~a~l~~~--~l~tl~~r~~~~~~na~~~a~~L~~~~~V~ 288 (400)
T PRK06234 244 ----------TGSVIGPFEAFLIIR--GMKTLQIRMEKHCKNAMKVAKFLESHPAVE 288 (400)
T ss_pred ----------cCCCCCHHHHHHHHh--ccCcHHHHHHHHHHHHHHHHHHHHcCCCee
Confidence 111234556676666 456677889999999999999999877654
No 192
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=99.72 E-value=8.5e-15 Score=141.14 Aligned_cols=359 Identities=14% Similarity=0.121 Sum_probs=229.3
Q ss_pred CCCCccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHH
Q 048643 91 QSPNYFAYFPSSGSIAGFLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAIL 170 (506)
Q Consensus 91 ~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l 170 (506)
..|.-++-+.........+.+.+.+.. ...|..+.+...-.+++.+++-+-+...-+ ..+.++|+|.++|+-
T Consensus 69 GDPsv~~~~~ts~~a~~Av~~al~Sgk---~N~Yaps~G~~~AR~AVAeYl~~~l~~kl~-----a~DV~ltsGC~qAIe 140 (447)
T KOG0259|consen 69 GDPSVYPCFRTSQEAEQAVVDALRSGK---GNGYAPSVGILPARRAVAEYLNRDLPNKLT-----ADDVVLTSGCSQAIE 140 (447)
T ss_pred CCCCccccccCCHHHHHHHHHHHhcCC---CCCcCCccccHHHHHHHHHHhhcCCCCccC-----cCceEEeccchHHHH
Confidence 456667766665555555666655543 234556666666677777775554443322 237899999999998
Q ss_pred HHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCcc
Q 048643 171 CTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVP 250 (506)
Q Consensus 171 ~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p 250 (506)
.++.+.-+ ++.-|+++...++-..--|...|+ +|++...-++.+|++|++.+|+.+++++.
T Consensus 141 ~~i~~LA~-----------p~aNILlPrPGfp~Y~~~a~~~~l---EVR~ydlLPe~~weIDL~~veal~DENT~----- 201 (447)
T KOG0259|consen 141 LAISSLAN-----------PGANILLPRPGFPLYDTRAIYSGL---EVRYYDLLPEKDWEIDLDGVEALADENTV----- 201 (447)
T ss_pred HHHHHhcC-----------CCCceecCCCCCchHHHhhhhcCc---eeEeecccCcccceechHHHHHhhccCee-----
Confidence 88876433 667799999988877888889999 99999887777899999999999999864
Q ss_pred EEEEEeccCCCCCcc---cChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEc-CccccCCC-Ccc
Q 048643 251 LFLCATIGTTAITAV---DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLN-AHKWFFTT-LDC 325 (506)
Q Consensus 251 ~~Vv~t~gtt~tG~i---dpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~-~hK~l~~p-~~~ 325 (506)
+++++.++|++|.+ +-|++|+++|+++|+.++.|..|+-.++-...+-..-.-...+-.+|.+ ..|-..+| +..
T Consensus 202 -AivviNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fssiVPVitlggisKrW~VPGWRl 280 (447)
T KOG0259|consen 202 -AIVVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSSIVPVITLGGISKRWIVPGWRL 280 (447)
T ss_pred -EEEEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcceeecCCCCccchhhccccCceEeecccccccccCCcee
Confidence 78889999999999 6699999999999999999999976554333222211111234455554 24544444 789
Q ss_pred eEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCccccC-CCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHH
Q 048643 326 CCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITL-SRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFER 404 (506)
Q Consensus 326 g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~-sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~ 404 (506)
|++.+.|+.-. |... ..+.. ..++.+.+... +--.. ++=..|..--++-|.+.+.-...++....+
T Consensus 281 GWi~~hD~~gv---f~~~-~~~q~-------~~~~~~~~~~p~TiiQ~--AlP~IL~kTp~efF~k~~~~lk~na~l~y~ 347 (447)
T KOG0259|consen 281 GWIALHDPRGV---FRDT-KVVQG-------IKNFLDIIPGPATIIQG--ALPDILEKTPEEFFDKKLSFLKSNADLCYS 347 (447)
T ss_pred eeEEEeccccc---ccch-HHHHH-------HHHHHhccCCccHhHHH--HhHHHHHhChHHHHHHHHHHHHhhHHHHHH
Confidence 99998876432 1100 00000 00000000000 00001 111233333456788888888899999999
Q ss_pred HHHcCCCCc----cceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhc-CcEEEeeeeECCEEEEEEEecCCCC
Q 048643 405 LVASDKRVS----PSAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINAS-GKAYMTHAVCGGIYAMRFAVGATLT 479 (506)
Q Consensus 405 ~l~~~~~~~----p~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~g~~~lR~~~~~~~t 479 (506)
.|+++|++. |.-..|-..+.....+ .+. +....++++|.++ ..+++.++.+.-++|+|++++-
T Consensus 348 ~Lk~IP~l~cp~kPeg~mylmv~l~~s~~--------~~~-~dD~dFc~kL~~Eesv~~LPG~af~~~nw~Ri~i~~--- 415 (447)
T KOG0259|consen 348 RLKDIPCLTCPVKPEGCMYLMVKLNLSLF--------PDI-EDDVDFCQKLAREESVICLPGQAFGLKNWLRIVITV--- 415 (447)
T ss_pred HHhcCCCcccCcCCCcceEEEeccchhhh--------ccc-cccHHHHHHHhhhcceEEeccccccCCCeEEEEEcc---
Confidence 999999988 4111121111110000 000 1123455555544 4455666666678999999963
Q ss_pred CHHHHHHHHHHHHHHHHHHHccC
Q 048643 480 EERHVMVAWTMVQEQLEAFLTTN 502 (506)
Q Consensus 480 t~edi~~li~~l~~~~~~l~~~~ 502 (506)
.++.++..++.|++...+-.+++
T Consensus 416 ~~~~leea~~Rik~Fc~RH~~~~ 438 (447)
T KOG0259|consen 416 EEEMLEEAFSRIKEFCDRHSKEQ 438 (447)
T ss_pred ChHHHHHHHHHHHHHHHhhhhcc
Confidence 56789999999999887755433
No 193
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.72 E-value=5.8e-15 Score=152.00 Aligned_cols=319 Identities=13% Similarity=0.057 Sum_probs=195.7
Q ss_pred HHHHHHHhhcCCC-CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcc
Q 048643 108 FLGEMLSSGFNVV-GFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGR 186 (506)
Q Consensus 108 ~~~~~l~~~~n~~-~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~ 186 (506)
.+.+.+...+... ...|....+..++.+.+.+|+.+.+|.+.+. ....++|+|+++++..++.+..+
T Consensus 48 ~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~----~~~ii~t~G~~~~i~~~~~~~~~-------- 115 (385)
T PRK09276 48 HIIEAMCKAVEDPENHQYPSYEGMLEFRKAVADWYKRRFGVELDP----ETEVISLIGSKEGIAHIPLAFVN-------- 115 (385)
T ss_pred HHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCC----CCcEEEccCcHHHHHHHHHHhCC--------
Confidence 4455555444322 2334443456789999999999888864331 01367778888887666554432
Q ss_pred cCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCccc
Q 048643 187 ENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVD 266 (506)
Q Consensus 187 ~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~id 266 (506)
++..|+++..++..+...++..|. +++.+|.+.++++.+|++.+++++.+. +.+|+++.++|+||.+-
T Consensus 116 ---~gd~Vl~~~P~y~~~~~~~~~~g~---~~~~v~~~~~~g~~~d~~~l~~~~~~~------~~~v~l~~p~NPtG~~~ 183 (385)
T PRK09276 116 ---PGDVVLVPDPGYPVYKIGTIFAGG---EPYFMPLKEENGFLPDLDAIPEDVAKK------AKLMFINYPNNPTGAVA 183 (385)
T ss_pred ---CCCEEEEcCCCCcChHHHHHHcCC---EEEEEecCCCCCCcCCHHHHHHhcccc------ceEEEEeCCCCCCCCCC
Confidence 566788898999888999999999 999999975445778999998887643 33788888999999996
Q ss_pred C---hhHHHHHHHHhCCEEEeecccccccccCccchhh--hcCCCCCCeeEEcCccccCCC-CcceEEEEeCchhHHhhh
Q 048643 267 P---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHF--IDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSALVSSL 340 (506)
Q Consensus 267 p---l~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~--~~gi~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~ 340 (506)
+ +++|+++|++||+|+++|.+|+.+..-....... +.+...-..+..++.|.++.| .-+|+++.. +.. .+.+
T Consensus 184 ~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~i~~-~~l-~~~~ 261 (385)
T PRK09276 184 DLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYNMTGWRIGFAVGN-ADL-IAGL 261 (385)
T ss_pred CHHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccCCCcCCEEEEecchhhcCCcchhheeeeCC-HHH-HHHH
Confidence 6 6889999999999999999997653211011111 111111224456788998644 557887653 332 2233
Q ss_pred cCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHh--chhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c-
Q 048643 341 STNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNY--GVANLRHFLRSHVNMAKLFERLVASDKRVS---P- 414 (506)
Q Consensus 341 ~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p- 414 (506)
.....++.. +. ..+...++...+ ....++++.++..+.++++.+.|++. +++ |
T Consensus 262 ~~~~~~~~~-----------------~~---~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~ 320 (385)
T PRK09276 262 GKVKSNVDS-----------------GV---FQAIQEAGIAALNGPQEVVEELRKIYQERRDILVEGLRKL-GLEVEPPK 320 (385)
T ss_pred HHHHhhccC-----------------CC---CHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCC
Confidence 211111100 00 111112222222 24456777777788899999999887 666 4
Q ss_pred -ce-EEEeecCCCcccccccccchHHHHHHHHHHHHHHHH-hcCcEEEeeeeEC--CEEEEEEEecCCCCCHHHHHHHHH
Q 048643 415 -SA-VMDKLKPKYENCHSQQLVTEEEAINEFNRELLESIN-ASGKAYMTHAVCG--GIYAMRFAVGATLTEERHVMVAWT 489 (506)
Q Consensus 415 -~~-v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lR~~~~~~~tt~edi~~li~ 489 (506)
+. +.+++.+. ....++.+.+. +.|+....+..+. +..++|+++.. +++++.+.++
T Consensus 321 ~~~~~~v~~~~~-----------------~~~~~l~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~~---~~~~l~~~l~ 380 (385)
T PRK09276 321 ATFYVWAPVPKG-----------------YTSAEFATLLLDKAGVVVTPGNGFGEYGEGYFRIALTV---PDERIEEAVE 380 (385)
T ss_pred cceEEEEECCCC-----------------CCHHHHHHHHHHhCCEEECCchhhCCCCCCeEEEEeCC---CHHHHHHHHH
Confidence 33 44444321 01245566655 4576443333222 24689999953 5667777766
Q ss_pred HHHH
Q 048643 490 MVQE 493 (506)
Q Consensus 490 ~l~~ 493 (506)
.|.+
T Consensus 381 ~l~~ 384 (385)
T PRK09276 381 RIKK 384 (385)
T ss_pred HHhh
Confidence 6543
No 194
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.72 E-value=2.3e-15 Score=154.93 Aligned_cols=219 Identities=10% Similarity=0.117 Sum_probs=157.3
Q ss_pred ccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCch--
Q 048643 125 ISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHC-- 202 (506)
Q Consensus 125 ~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~-- 202 (506)
...|...++|+. ++++.|.+ ..+++++|+.|+..++.+... ++..|+++...|.
T Consensus 67 ~~~p~~~~le~~----lA~l~g~~---------~al~~~sG~~Ai~~~l~all~-----------~Gd~Vl~~~~~~~~t 122 (403)
T PRK07810 67 YGNPTVSMFEER----LRLIEGAE---------ACFATASGMSAVFTALGALLG-----------AGDRLVAARSLFGSC 122 (403)
T ss_pred CCCchHHHHHHH----HHHHhCCC---------cEEEECChHHHHHHHHHHHhC-----------CCCEEEEccCCcchH
Confidence 356666667655 67777754 468889999888877655432 5567777776552
Q ss_pred --HHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCC
Q 048643 203 --ALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGI 280 (506)
Q Consensus 203 --s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~ 280 (506)
.+.+.++..|+ +++.++. .|+++|+++|++.++ +|++..+++++|.+-|+++|+++|+++|+
T Consensus 123 ~~~~~~~~~~~G~---~v~~vd~-------~d~~~l~~ai~~~tk------lV~~esp~Nptg~v~dl~~I~~la~~~g~ 186 (403)
T PRK07810 123 FVVCNEILPRWGV---ETVFVDG-------EDLSQWEEALSVPTQ------AVFFETPSNPMQSLVDIAAVSELAHAAGA 186 (403)
T ss_pred HHHHHHHHHHcCc---EEEEECC-------CCHHHHHHhcCcCce------EEEEECCCCCCCeecCHHHHHHHHHHcCC
Confidence 33456677788 8888863 388999999976543 78899999999999999999999999999
Q ss_pred EEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCc--ceEEEEeCchhHHhhhcCCccccCCccccCCCcc
Q 048643 281 WVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLD--CCCLWVKDPSALVSSLSTNPEYLKNKATESKQVV 358 (506)
Q Consensus 281 ~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~ 358 (506)
+++||++|+.+....+ .. -++|.++.++||+++.+-. .|+++.++. .+...+. .+...
T Consensus 187 ~vivD~a~a~~~~~~~-~~------~gaDivv~S~tK~l~g~g~~~gG~v~~~~~-~~~~~l~---~~~~~--------- 246 (403)
T PRK07810 187 KVVLDNVFATPLLQRG-LP------LGADVVVYSGTKHIDGQGRVLGGAILGDRE-YIDGPVQ---KLMRH--------- 246 (403)
T ss_pred EEEEECCCCccccCCh-hh------cCCcEEEccCCceecCCcCceeEEEEeChH-HHHHHHH---HHHHH---------
Confidence 9999999976544322 11 1689999999999987543 566665543 2221111 11110
Q ss_pred CCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc
Q 048643 359 DYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS 413 (506)
Q Consensus 359 ~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~ 413 (506)
.+....+...|+.++ |.+.+..++++..+++.++.+.|+++|.++
T Consensus 247 --------~g~~~s~~~a~l~l~--~L~tl~~R~~~~~~~a~~~a~~L~~~p~v~ 291 (403)
T PRK07810 247 --------TGPALSAFNAWVLLK--GLETLALRVRHSNASALRIAEFLEGHPAVR 291 (403)
T ss_pred --------hCCCCCHHHHHHHHh--ccCcHHHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 112235566677766 567889999999999999999999988765
No 195
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.72 E-value=6.3e-16 Score=157.05 Aligned_cols=277 Identities=12% Similarity=0.109 Sum_probs=183.2
Q ss_pred HHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCC-CeEEEeCCCCchHHHHHHHHhCC
Q 048643 135 NIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENIS-KLVVYGSDQTHCALQKAAQIVGI 213 (506)
Q Consensus 135 ~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~-~~~v~~s~~~H~s~~ka~~~~G~ 213 (506)
.++.+++++.+|++.+ ..++|+|+++++..++.+... + +..|+++..+|..+...++..|+
T Consensus 60 ~~l~~~~a~~~g~~~~-------~I~~~~Gs~e~i~~~~~~~~~-----------~g~~~vli~~P~y~~y~~~~~~~G~ 121 (351)
T PRK01688 60 KAVIENYAAYAGVKPE-------QVLVSRGADEGIELLIRAFCE-----------PGKDAILYCPPTYGMYSVSAETIGV 121 (351)
T ss_pred HHHHHHHHHHhCCCHH-------HEEEcCCHHHHHHHHHHHhcC-----------CCCCEEEEcCCCHHHHHHHHHHcCC
Confidence 4667889999999775 789999999888766654422 3 36788888999999999999999
Q ss_pred CCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHh--CCEEEeecccccc
Q 048643 214 DLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQF--GIWVHVDAAYAGS 291 (506)
Q Consensus 214 g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~--g~~lhVDaA~gg~ 291 (506)
+++.+|.++ ++.+|+++|++++. . +.+|+++.++|+||.+-+.+++.++++.. +.+++||+||.-+
T Consensus 122 ---~~~~v~~~~--~~~~d~~~l~~~~~-~------~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vivDEay~~f 189 (351)
T PRK01688 122 ---EIRTVPTLD--NWQLDLPAIADNLD-G------VKVVYVCSPNNPTGNLINPQDLRTLLELTRGKAIVVADEAYIEF 189 (351)
T ss_pred ---EEEEeecCC--CCCCCHHHHHHhcc-C------CcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhc
Confidence 999999874 57999999998873 2 23788889999999998877777776542 6899999999654
Q ss_pred cccCccchhhhcCCCCCCeeEEcCccccCC-CCcceEEEEeCchhHHhhhcC-CccccCCccccCCCccCCCCccccCCC
Q 048643 292 ACICPEFQHFIDGVEGADSFSLNAHKWFFT-TLDCCCLWVKDPSALVSSLST-NPEYLKNKATESKQVVDYKDWQITLSR 369 (506)
Q Consensus 292 ~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~-p~~~g~~~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~sr 369 (506)
.. .+.....+..... -.+.-++.|+++. ...+|+++.. ++.. +.+.. ..+| . .+
T Consensus 190 ~~-~~s~~~~~~~~~n-~iv~rSfSK~~glaGlRiGy~i~~-~~~i-~~l~~~~~~~-----------------~--v~- 245 (351)
T PRK01688 190 CP-QASLAGWLAEYPH-LVILRTLSKAFALAGLRCGFTLAN-EEVI-NLLLKVIAPY-----------------P--LS- 245 (351)
T ss_pred CC-CCChHHHHhhCCC-EEEEecchHhhcCHHHHHhHHhCC-HHHH-HHHHhccCCC-----------------C--CC-
Confidence 31 1111122211111 1345668898874 3556777653 3332 22321 1111 0 11
Q ss_pred CCCchHHHHHHHHh---chhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c---ceEEEeecCCCcccccccccchHHHH
Q 048643 370 RFRSLKLWLVIRNY---GVANLRHFLRSHVNMAKLFERLVASDKRVS---P---SAVMDKLKPKYENCHSQQLVTEEEAI 440 (506)
Q Consensus 370 ~~~al~~~~~l~~~---G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p---~~v~f~~~~~~~~~~~~~~~~~~~~~ 440 (506)
.+...++...+ +.+.+++.++...+.++++.+.|+++++++ | +.+.+++.+
T Consensus 246 ---~~~~~~a~~~L~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~ps~~nfi~~~~~~----------------- 305 (351)
T PRK01688 246 ---TPVADIAAQALSPQGIAAMRERVAEINANRQWLIAALKEIPCVEQVFDSETNYILARFTA----------------- 305 (351)
T ss_pred ---HHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCCCcEEEEEcCC-----------------
Confidence 11112222222 234567777777788899999999987774 4 655555431
Q ss_pred HHHHHHHHHHHHhcCcEEEeeeeE-CCEEEEEEEecCCCCCHHHHHHHHHHHH
Q 048643 441 NEFNRELLESINASGKAYMTHAVC-GGIYAMRFAVGATLTEERHVMVAWTMVQ 492 (506)
Q Consensus 441 ~~~~~~l~~~l~~~g~~~~~~~~~-~g~~~lR~~~~~~~tt~edi~~li~~l~ 492 (506)
..++.+.|.++|+........ ....++|+++. +++++++++++|+
T Consensus 306 ---~~~l~~~L~~~gi~vr~~~~~~~~~~~iRis~~----~~~e~~~l~~al~ 351 (351)
T PRK01688 306 ---SSAVFKSLWDQGIILRDQNKQPGLSNCLRITIG----TREECQRVIDALR 351 (351)
T ss_pred ---HHHHHHHHHHCCeEEEECCCcCCCCCeEEEeCC----CHHHHHHHHHhhC
Confidence 245677777788754433322 22468999985 5689999998873
No 196
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.72 E-value=1.1e-16 Score=144.37 Aligned_cols=166 Identities=24% Similarity=0.179 Sum_probs=126.9
Q ss_pred HHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHH-HHHHHhCCC
Q 048643 136 IVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQ-KAAQIVGID 214 (506)
Q Consensus 136 ~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~-ka~~~~G~g 214 (506)
++.++++++++.+.. .+++++|||+|+..++.+++. ++..|+++...|.+.. ..+...|.
T Consensus 4 ~~~~~l~~~~~~~~~-------~~~~~~~~t~a~~~~~~~~~~-----------~~~~v~~~~~~~~~~~~~~~~~~g~- 64 (170)
T cd01494 4 ELEEKLARLLQPGND-------KAVFVPSGTGANEAALLALLG-----------PGDEVIVDANGHGSRYWVAAELAGA- 64 (170)
T ss_pred HHHHHHHHHcCCCCC-------cEEEeCCcHHHHHHHHHHhCC-----------CCCEEEEeecccceehhhHHHhcCC-
Confidence 456889999973333 678899999999888887653 3456788888998888 88888899
Q ss_pred CCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeeccccccccc
Q 048643 215 LKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACI 294 (506)
Q Consensus 215 ~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~~ 294 (506)
+++.++.+.++....+.+.+++.. ....|.+|+++.+++++|...|+++|+++|+++|+++|+|++|+++...
T Consensus 65 --~~~~v~~~~~~~~~~~~~~~~~~~-----~~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~ 137 (170)
T cd01494 65 --KPVPVPVDDAGYGGLDVAILEELK-----AKPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDAASAGGASP 137 (170)
T ss_pred --EEEEeccCCCCccchhhhhhhhcc-----ccCceEEEEEecCcCCCCeEcCHHHHHHHHHHcCCEEEEeccccccccc
Confidence 999999875432222332333321 2345778999999999999999999999999999999999999887665
Q ss_pred CccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEe
Q 048643 295 CPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVK 331 (506)
Q Consensus 295 ~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r 331 (506)
.+.... ...++|.++.++|||++. .++|++++|
T Consensus 138 ~~~~~~---~~~~~d~~~~s~~K~~~~-~~~G~l~~~ 170 (170)
T cd01494 138 APGVLI---PEGGADVVTFSLHKNLGG-EGGGVVIVK 170 (170)
T ss_pred cccccc---ccccCCEEEEEcccccCC-CceEEEEeC
Confidence 422111 123799999999999998 789999875
No 197
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.72 E-value=3.7e-15 Score=154.28 Aligned_cols=239 Identities=15% Similarity=0.156 Sum_probs=151.5
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHH
Q 048643 126 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQ 205 (506)
Q Consensus 126 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 205 (506)
..|...++|+ .++++.|.+ ..+++++|++|+..++.+... ++..|+++...+....
T Consensus 56 ~~pt~~~Le~----~lA~l~g~~---------~~l~~ssG~~Ai~~al~al~~-----------~Gd~Vl~~~~~Y~~t~ 111 (425)
T PRK06084 56 MNPTNDVLEQ----RVAALEGGV---------GALAVASGMAAITYAIQTIAE-----------AGDNIVSVAKLYGGTY 111 (425)
T ss_pred CCchHHHHHH----HHHHHhCCC---------ceeEehhHHHHHHHHHHHHhC-----------CCCEEEEeCCCcchHH
Confidence 3455556665 477777743 457888899888877766543 4455666766665444
Q ss_pred HHHH----HhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCE
Q 048643 206 KAAQ----IVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIW 281 (506)
Q Consensus 206 ka~~----~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~ 281 (506)
..+. ..|+ ++..++ ..|+++|+++++++++ +|++..++|++|.+-|+++|+++|+++|++
T Consensus 112 ~~~~~~l~~~gi---~v~~~d-------~~d~e~le~ai~~~tk------lV~lesp~NPtG~v~dl~~I~~la~~~~i~ 175 (425)
T PRK06084 112 NLLAHTLPRIGI---ETRFAA-------HDDIAALEALIDERTK------AVFCESIGNPAGNIIDIQALADAAHRHGVP 175 (425)
T ss_pred HHHHHhccccee---EEEEEC-------CCCHHHHHHHhccCCc------EEEEeCCCCCCCeecCHHHHHHHHHHcCCE
Confidence 4332 2344 555554 2489999999976543 788889999999999999999999999999
Q ss_pred EEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCc-ceEEEEeCch-hHHhh------h-cCCccccCCccc
Q 048643 282 VHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLD-CCCLWVKDPS-ALVSS------L-STNPEYLKNKAT 352 (506)
Q Consensus 282 lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~-~g~~~~r~~~-~l~~~------~-~~~~~yl~~~~~ 352 (506)
++||++|+.+....+ .. .++|.+..+.|||++.+-. .|.+++.+.. ..... + ...+.|..-...
T Consensus 176 vVvD~a~a~~~~~~p-~~------~gaDivv~S~tK~l~G~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (425)
T PRK06084 176 LIVDNTVATPVLCRP-FE------HGADIVVHSLTKYIGGHGTSIGGIVVDSGKFPWAEHKERFALLNTPDPSYHGVTYT 248 (425)
T ss_pred EEEECCCcccccCCh-hh------cCCCEEEECchhcccccccceeEEEEeCCccchhhccccccccccCCcccccchhh
Confidence 999999986554322 11 1799999999999987633 3334443221 11100 1 111122110000
Q ss_pred cCCCccCC-----CCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc
Q 048643 353 ESKQVVDY-----KDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS 413 (506)
Q Consensus 353 ~~~~~~~~-----~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~ 413 (506)
...+.... .......+.+..+..+|+.++ |.+.+..+++++.++|..+++.|+++|.++
T Consensus 249 ~~~g~~~~~~~~~~~~~~~~g~~l~~~~a~l~lr--gl~tl~~R~~~~~~na~~la~~L~~~p~v~ 312 (425)
T PRK06084 249 EAFGPAAFIGRCRVVPLRNMGAALSPFNAFLILQ--GLETLALRMERHTENALKVARYLQQHPQVA 312 (425)
T ss_pred hhcchHHHHHHHHHHHHHhcCCCCCHHHHHHHHc--CcCcHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 00000000 000112233455667777776 668899999999999999999999998765
No 198
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.72 E-value=1e-14 Score=150.50 Aligned_cols=321 Identities=13% Similarity=0.073 Sum_probs=197.6
Q ss_pred HHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCC-CcEEEcCCchHHHHHHHHHHHHHHHHhh
Q 048643 106 AGFLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGN-GGGVIQGTTCEAILCTLTAARDRVLNKI 184 (506)
Q Consensus 106 ~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~-~~g~~t~ggt~a~l~al~~ar~~~~~~~ 184 (506)
+..+.+.+...+. ....|....+..++.+.+.+|+.+.+|++... .. ...++|+|+++++..++.+..+
T Consensus 43 ~~~~~~a~~~~~~-~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~---~~~~~i~it~Ga~~al~~~~~~l~~------ 112 (393)
T TIGR03538 43 PAFVLEALRENLH-GLSTYPTTKGLPELRQAIARWLERRFDLPTGV---DPERHVLPVNGTREALFAFAQAVIN------ 112 (393)
T ss_pred CHHHHHHHHHHhh-ccCCCCCCCCCHHHHHHHHHHHHHhhCCcccC---CCCceEEECCCcHHHHHHHHHHHcC------
Confidence 3445555554443 23345555556889999999999988876211 01 1477889998888766665433
Q ss_pred cccCCCC--eEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCC
Q 048643 185 GRENISK--LVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAI 262 (506)
Q Consensus 185 ~~~~~~~--~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~t 262 (506)
++ ..|+++...+..+...++..|+ +++.||+++++++.+|++.|++++.+.+ .+|+++.++|+|
T Consensus 113 -----~gd~~~vlv~~P~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~~~~~~------k~i~l~~p~NPt 178 (393)
T TIGR03538 113 -----PGQAPLVVMPNPFYQIYEGAALLAGA---EPYFLNCTAENGFLPDFDAVPESVWRRC------QLLFVCSPGNPT 178 (393)
T ss_pred -----CCCcceEEecCCCCcchHHHHHhcCC---eEEEeeccccCCCCCCHHHHHHHHhhcc------eEEEEeCCCCCc
Confidence 33 3478888888888888999999 9999999755557899999999886533 367778999999
Q ss_pred CcccC---hhHHHHHHHHhCCEEEeecccccccccCc-cchh---hhcCCC--CC--CeeEEcCccc-cCCCCcceEEEE
Q 048643 263 TAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACICP-EFQH---FIDGVE--GA--DSFSLNAHKW-FFTTLDCCCLWV 330 (506)
Q Consensus 263 G~idp---l~~I~~ia~~~g~~lhVDaA~gg~~~~~~-~~~~---~~~gi~--~a--Dsi~~~~hK~-l~~p~~~g~~~~ 330 (506)
|.+-+ +++|+++|++||+|+++|.+|.....-.. .... .+..+. .. -.+..++.|. +.....+|+++.
T Consensus 179 G~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~~~GlRvG~~i~ 258 (393)
T TIGR03538 179 GAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSNLPGLRSGFVAG 258 (393)
T ss_pred CcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEecchhhcCCcccceEEEec
Confidence 99965 88999999999999999999975432110 0000 011010 01 1456678995 456677888765
Q ss_pred eCchhHHhhhcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhc-hhHHHHHHHHHHHHHHHHHHHHHcC
Q 048643 331 KDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYG-VANLRHFLRSHVNMAKLFERLVASD 409 (506)
Q Consensus 331 r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G-~~g~~~~i~~~~~~a~~l~~~l~~~ 409 (506)
. +... +.+.....+.. .....+..++++..+. .+.+++..++..+..+.+.+.|++.
T Consensus 259 ~-~~l~-~~~~~~~~~~~--------------------~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~ 316 (393)
T TIGR03538 259 D-AEIL-KAFLRYRTYHG--------------------CAMPIPTQLASIAAWNDEQHVRENRALYREKFAAVLEILGQV 316 (393)
T ss_pred C-HHHH-HHHHHHHHhhc--------------------cCcCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 4 3222 22211101110 0011222233333332 3446666667777788888888764
Q ss_pred CCCc-c---ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHH-hcCcEEEeeeeE--------CCEEEEEEEecC
Q 048643 410 KRVS-P---SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESIN-ASGKAYMTHAVC--------GGIYAMRFAVGA 476 (506)
Q Consensus 410 ~~~~-p---~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~--------~g~~~lR~~~~~ 476 (506)
-.+. | ..+.+++... ..++.+.+. +.|+.+..+..+ .+..++|++++.
T Consensus 317 ~~~~~p~gg~f~~~~~~~~-------------------~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~Ris~~~ 377 (393)
T TIGR03538 317 LDLELPDAGFYLWPKVPGD-------------------DEAFARALYEEENVTVLPGRFLAREAEGVNPGEGRVRIALVA 377 (393)
T ss_pred CcccCCCeeEEEEEECCCC-------------------HHHHHHHHHHHCCEEEeCCccccccccCCCCCCCEEEEEecC
Confidence 2333 5 3344444211 134555554 357644433322 135789999864
Q ss_pred CCCCHHHHHHHHHHHHHH
Q 048643 477 TLTEERHVMVAWTMVQEQ 494 (506)
Q Consensus 477 ~~tt~edi~~li~~l~~~ 494 (506)
++++++..++.|.+.
T Consensus 378 ---~~~~l~~~l~~l~~~ 392 (393)
T TIGR03538 378 ---PLEECVEAAERIRSF 392 (393)
T ss_pred ---CHHHHHHHHHHHHHh
Confidence 467888888887653
No 199
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.71 E-value=2.8e-15 Score=153.65 Aligned_cols=217 Identities=14% Similarity=0.225 Sum_probs=151.3
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchH--
Q 048643 126 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCA-- 203 (506)
Q Consensus 126 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s-- 203 (506)
..|...++| +.+++++|.+ ..+++++|++|+..++.+... ++..|+++...|.+
T Consensus 52 ~~p~~~~le----~~la~l~g~~---------~~~~~~sG~~Ai~~al~al~~-----------~Gd~Vl~~~~~~~~t~ 107 (380)
T TIGR01325 52 ANPTVAAFE----ERIAALEGAE---------RAVATATGMSAIQAALMTLLQ-----------AGDHVVASRSLFGSTV 107 (380)
T ss_pred CCchHHHHH----HHHHHHhCCC---------cEEEECCHHHHHHHHHHHHhC-----------CCCEEEEecCCcchHH
Confidence 345555666 4577788874 357889999999888765432 44556667666643
Q ss_pred --HHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCE
Q 048643 204 --LQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIW 281 (506)
Q Consensus 204 --~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~ 281 (506)
+.+.+..+|+ +++.++.+ |++++++++++. +.+|++..+++++|.+.|+++|+++|+++|++
T Consensus 108 ~~~~~~~~~~g~---~v~~v~~~-------d~~~l~~~i~~~------tklV~le~p~np~g~~~dl~~I~~la~~~gi~ 171 (380)
T TIGR01325 108 GFISEILPRFGI---EVSFVDPT-------DLNAWEAAVKPN------TKLVFVETPSNPLGELVDIAALAELAHAIGAL 171 (380)
T ss_pred HHHHHHHHHhCC---EEEEECCC-------CHHHHHHhcCCC------ceEEEEECCCCCCCeeeCHHHHHHHHHHcCCE
Confidence 3345667788 88888753 688888887653 34888899999999999999999999999999
Q ss_pred EEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCc-c-eEEEEeCchhHHhhhcCCccccCCccccCCCccC
Q 048643 282 VHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLD-C-CCLWVKDPSALVSSLSTNPEYLKNKATESKQVVD 359 (506)
Q Consensus 282 lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~-~-g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 359 (506)
++||++|+.+....+ .. .++|.++.++||+++.+.. . |+++. ++.... .+. .+..
T Consensus 172 livD~a~~~~~~~~p-l~------~g~Divv~S~sK~l~g~g~~~gG~vv~-~~~~~~-~l~---~~~~----------- 228 (380)
T TIGR01325 172 LVVDNVFATPVLQQP-LK------LGADVVVYSATKHIDGQGRVMGGVIAG-SEELMA-EVA---VYLR----------- 228 (380)
T ss_pred EEEECCCcccccCCc-hh------hCCCEEEeeccceecCCCCeEEEEEEe-CHHHHH-HHH---HHHH-----------
Confidence 999999976543222 11 1689999999999987642 3 55544 333322 221 0110
Q ss_pred CCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc
Q 048643 360 YKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS 413 (506)
Q Consensus 360 ~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~ 413 (506)
..+....+..+|..++ |.+.+..++++..+++.++.+.|+++|+++
T Consensus 229 ------~~g~~~~p~~a~~~l~--~l~tl~~r~~~~~~~a~~la~~L~~~p~v~ 274 (380)
T TIGR01325 229 ------HTGPAMSPFNAWVLLK--GLETLSLRMQKQFDSALAIAEWLQAQPQVQ 274 (380)
T ss_pred ------hhCCCCCHHHHHHHHh--ccCcHHHHHHHHHHHHHHHHHHHHcCCCcc
Confidence 0111233455676665 567788889999999999999999988654
No 200
>PLN02271 serine hydroxymethyltransferase
Probab=99.71 E-value=1.9e-15 Score=156.03 Aligned_cols=321 Identities=10% Similarity=0.020 Sum_probs=197.8
Q ss_pred ccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCC---Cc
Q 048643 125 ISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQ---TH 201 (506)
Q Consensus 125 ~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~---~H 201 (506)
.......++|..+++...++||++... .+.-+-.-+||.||+.++.+... +++.|+..+. .|
T Consensus 187 ~G~~~iD~iE~la~era~~lF~~~~~~----~gaNVQp~SGs~AN~aV~~ALl~-----------PGD~IL~ldl~~GGH 251 (586)
T PLN02271 187 TGNQYIDQIERLCCERALAAFGLDSEK----WGVNVQPYSCTSANFAVYTGLLL-----------PGDRIMGLDSPSGGH 251 (586)
T ss_pred CCChhHHHHHHHHHHHHHHHhCCcccc----cccceeeccHHHHHHHHHHHhcC-----------CCCEEEEecCCCCCc
Confidence 344456799999999999999987531 01123344789999888776643 6667776443 56
Q ss_pred hHHH------HHHHHhCCCCCCeEEEe--cCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHH
Q 048643 202 CALQ------KAAQIVGIDLKNFRAIK--TTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCD 273 (506)
Q Consensus 202 ~s~~------ka~~~~G~g~~~v~~v~--~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ 273 (506)
.+.. +.+...|+ .+..+| +++ +++.+|.++|++.+... +|.+|++.+..++ ..-|+++|++
T Consensus 252 lshg~~~~~g~~vs~sG~---~~~~vpY~~d~-~~g~IDyd~lek~a~~~-----rPKLII~g~Sayp--r~~D~~~i~e 320 (586)
T PLN02271 252 MSHGYYTPGGKKVSGASI---FFESLPYKVNP-QTGYIDYDKLEEKALDF-----RPKILICGGSSYP--REWDYARFRQ 320 (586)
T ss_pred hhcccccccccccccccc---eEEEEEccccc-ccCccCHHHHHHHhhhc-----CCeEEEECchhcc--CcCCHHHHHH
Confidence 6543 23355566 566666 543 35799999999855332 3667777554444 6688999999
Q ss_pred HHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccc-
Q 048643 274 VAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKAT- 352 (506)
Q Consensus 274 ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~- 352 (506)
||+++|++++||+||..+.+....+..- +..||.++.+.||||..|.| |++++++... ... .+....+...
T Consensus 321 IAdevGA~LmvD~AH~aGLIa~g~~~sP---~~~aDvvt~TTHKtLrGPrG-G~I~~r~~~~--~~~--~g~~gs~s~~~ 392 (586)
T PLN02271 321 IADKCGAVLMCDMAHISGLVAAKECVNP---FDYCDIVTSTTHKSLRGPRG-GIIFYRKGPK--LRK--QGMLLSHGDDN 392 (586)
T ss_pred HHHHcCCEEEEECcccccccccCcCCCC---CcCCcEEEeCCcccCCCCCc-eEEEeccccc--ccc--cCCcccccccc
Confidence 9999999999999998888765543322 23799999999999999999 8888875421 000 0000000000
Q ss_pred ---cCCCccCCC-CccccCCCCCC-chHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc-----c--ceEEEe
Q 048643 353 ---ESKQVVDYK-DWQITLSRRFR-SLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS-----P--SAVMDK 420 (506)
Q Consensus 353 ---~~~~~~~~~-~~~~~~sr~~~-al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~-----p--~~v~f~ 420 (506)
+.....+.. -.+++.+-... ..++-.+++......|++..++..++|+.|++.|.+. ||+ . ..|.+.
T Consensus 393 ~~~d~~~kI~~aVfPglqgGphn~~IAalAvalkea~~~efk~Ya~QVv~NAkaLA~~L~~~-G~~vv~ggTdnHlvLvD 471 (586)
T PLN02271 393 SHYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQVATPEYKAYMQQVKKNAQALASALLRR-KCRLVTGGTDNHLLLWD 471 (586)
T ss_pred ccHHHHHHhhcccCCccccChhHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHC-CCeEeeCCCCcceeeec
Confidence 000000000 01444443322 3455666776666678999999999999999999887 776 1 555555
Q ss_pred ecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeE-----CCEEEEEEEe---cCCCCCHHHHHHHHHHHH
Q 048643 421 LKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVC-----GGIYAMRFAV---GATLTEERHVMVAWTMVQ 492 (506)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~-----~g~~~lR~~~---~~~~tt~edi~~li~~l~ 492 (506)
+.+.+. + .....+.|.+.|+..-..+.+ .....+|+.+ +..-..++|++++.+.|.
T Consensus 472 l~~~g~---------~-------G~~ae~~Le~~~I~~Nkn~iP~d~~~~~psGiRiGT~alT~rG~~e~d~~~iA~~i~ 535 (586)
T PLN02271 472 LTTLGL---------T-------GKNYEKVCEMCHITLNKTAIFGDNGTISPGGVRIGTPAMTSRGCLESDFETIADFLL 535 (586)
T ss_pred CcccCC---------C-------HHHHHHHHHHcCeEeccccCCCCCCCCCCCcccccCHHHHhcCCCcHHHHHHHHHHH
Confidence 543211 0 122233333335432111111 1234689986 223334578888777777
Q ss_pred HHHH
Q 048643 493 EQLE 496 (506)
Q Consensus 493 ~~~~ 496 (506)
++.+
T Consensus 536 ~~~~ 539 (586)
T PLN02271 536 RAAQ 539 (586)
T ss_pred HHHh
Confidence 7655
No 201
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.71 E-value=4.1e-15 Score=153.24 Aligned_cols=317 Identities=15% Similarity=0.107 Sum_probs=187.7
Q ss_pred cccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCc
Q 048643 122 FNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTH 201 (506)
Q Consensus 122 ~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H 201 (506)
..|..++...+||+.+.++ +|.+ ..++|+||++|+..++.+..+ ++.+| ++. .|
T Consensus 47 ~~Y~~~~g~~~Leeaia~~----~g~~---------~vv~t~~Gt~Al~la~~al~~-----------pGD~V-~~~-~~ 100 (431)
T cd00617 47 EAYAGSKSFYDLEDAVQDL----FGFK---------HIIPTHQGRGAENILFSILLK-----------PGRTV-PSN-MH 100 (431)
T ss_pred CccCCCCCHHHHHHHHHHH----HCCC---------eEEEcCCHHHHHHHHHHHhCC-----------CCCEE-ccC-Cc
Confidence 4588888899999886555 4553 579999999999988776533 45555 454 55
Q ss_pred h-HHHHHHHHhCCCCCCeEEEecCCCC--------CcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCC-Cccc---Ch
Q 048643 202 C-ALQKAAQIVGIDLKNFRAIKTTKSS--------SYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAI-TAVD---PL 268 (506)
Q Consensus 202 ~-s~~ka~~~~G~g~~~v~~v~~~~~~--------~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~t-G~id---pl 268 (506)
+ +....+.+.|. .++.+++++.. .|.+|+++|+++|.+... .++.+|+++.++|++ |.+- ++
T Consensus 101 f~~~~~~i~~~Ga---~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~--~~~~~I~v~~p~N~~gG~~~s~~~l 175 (431)
T cd00617 101 FDTTRGHIEANGA---VPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGA--ENIPYIVLTITNNTAGGQPVSMANL 175 (431)
T ss_pred ccchHHHHHhCCC---EeEEEecccccccccccCCCCCcCHHHHHHHhCcccC--CCccEEEEECCcCCCCCccCCHHHH
Confidence 5 55567788898 99999987432 245999999999975411 124468888888887 7774 56
Q ss_pred hHHHHHHHHhCCEEEeecccccc-cccC----ccch-----hhh-cCCCCCCeeEEcCccccCCCCcceEEEEeCchhHH
Q 048643 269 KPLCDVAKQFGIWVHVDAAYAGS-ACIC----PEFQ-----HFI-DGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALV 337 (506)
Q Consensus 269 ~~I~~ia~~~g~~lhVDaA~gg~-~~~~----~~~~-----~~~-~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~ 337 (506)
++|+++|++||+|+|.|+|+... +.+. +.+. ... .-...+|++++++||-+.+|. .|+++.++++...
T Consensus 176 ~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si~ei~~e~~s~sd~~~mS~~K~~~~~~-GG~i~~~d~~l~~ 254 (431)
T cd00617 176 REVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSIAEIAREMFSYADGCTMSAKKDGLVNI-GGFLALRDDELYE 254 (431)
T ss_pred HHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCHHHHHHHhhccCCEEEEEeecCCCCcc-ceEEEeCcHHHHH
Confidence 78899999999999999996432 1121 1111 111 112479999999999998876 4567777654443
Q ss_pred hhhcCCccccCCccccCCCccCCCCccccCCCCCCchH-HHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc---
Q 048643 338 SSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLK-LWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS--- 413 (506)
Q Consensus 338 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~-~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~--- 413 (506)
+ +.. +..... + +.. .++-..+-+. +-.+|... .+ .+.+++..+.+++|.+.|.+. ||.
T Consensus 255 ~-~~~---~~~~~~----~---~~~---~gG~~~r~~~A~A~gL~e~-~~--~~~l~~~~~~r~~l~~~L~~~-G~~v~~ 316 (431)
T cd00617 255 E-ARQ---RVVLYE----G---FVT---YGGMAGRDMEALAQGLREA-VE--EDYLRHRVEQVRYLGDRLDEA-GVPIVE 316 (431)
T ss_pred H-HHH---hccccC----C---ccc---cccccHHHHHHHHHHHHhc-cc--HHHHHHHHHHHHHHHHHHHHC-CCCccC
Confidence 3 221 110000 0 000 0111111111 11122211 11 345666667789999999987 676
Q ss_pred c--c-eEEEeecCCCcccccccccchHHHHHHHHHHHHHHHH-hcCcEEEeeee------EC-------CEEEEEEEecC
Q 048643 414 P--S-AVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESIN-ASGKAYMTHAV------CG-------GIYAMRFAVGA 476 (506)
Q Consensus 414 p--~-~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~------~~-------g~~~lR~~~~~ 476 (506)
| . .|......-. . ....+.. -...+..+|. +.|+..+.-+. .. .-..+|+++--
T Consensus 317 P~Ggh~v~~d~~~~~-~------~~~~~~~--~~~~la~~L~~e~gV~~~~~g~~~~~~~~~~~~~~~~~~~~~rl~~pr 387 (431)
T cd00617 317 PAGGHAVFIDAREFL-P------HIPQEQF--PAQALAAELYLEAGVRAVELGIFSAGRDPNTGENKYPELELVRLAIPR 387 (431)
T ss_pred CCcceEEEEEhHHhc-C------CCCcccC--cHHHHHHHHHHHcCeeEEeecceecccCCCCCcccCCccceeEEeccc
Confidence 5 2 3333322100 0 0000000 1234444433 34554333211 11 13689999843
Q ss_pred CCCCHHHHHHHHHHHHHHHHH
Q 048643 477 TLTEERHVMVAWTMVQEQLEA 497 (506)
Q Consensus 477 ~~tt~edi~~li~~l~~~~~~ 497 (506)
.--|.++++.+.+.|..+.++
T Consensus 388 r~~t~~~~~~~~~~~~~~~~~ 408 (431)
T cd00617 388 RVYTQDHMDYVAAAVIALYER 408 (431)
T ss_pred cccCHHHHHHHHHHHHHHHhh
Confidence 345678999999999988765
No 202
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.71 E-value=4.1e-15 Score=152.14 Aligned_cols=283 Identities=14% Similarity=0.071 Sum_probs=182.9
Q ss_pred HHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCCCC
Q 048643 137 VMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGIDLK 216 (506)
Q Consensus 137 ~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~ 216 (506)
+.+.+++++|.+.+ ..++|+|+++++...+.+... ++..|+++...|..+...+...|.
T Consensus 72 lr~~ia~~~~~~~~-------~i~~t~G~~~~l~~~~~~l~~-----------~gd~vl~~~p~y~~~~~~~~~~g~--- 130 (367)
T PRK02731 72 LKAALAEKFGVDPE-------RIILGNGSDEILELLARAYLG-----------PGDEVIYSEHGFAVYPIAAQAVGA--- 130 (367)
T ss_pred HHHHHHHHhCcCHH-------HEEEcCCHHHHHHHHHHHhcC-----------CCCEEEEecCCHHHHHHHHHHcCC---
Confidence 44556667787654 678888877765444333211 456788888888777777888899
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHh--CCEEEeeccccccccc
Q 048643 217 NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQF--GIWVHVDAAYAGSACI 294 (506)
Q Consensus 217 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~--g~~lhVDaA~gg~~~~ 294 (506)
+++.+|.+ ++.+|++.|++++++. +.+|+++.++|+||.+-|+++|.++|+.+ |+|+++|++|..+..-
T Consensus 131 ~~~~~~~~---~~~~~~~~l~~~~~~~------~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~y~~~~~~ 201 (367)
T PRK02731 131 KPVEVPAK---DYGHDLDAMLAAVTPR------TRLVFIANPNNPTGTYLPAEEVERFLAGVPPDVLVVLDEAYAEYVRR 201 (367)
T ss_pred eEEEeccc---CCCCCHHHHHHHhCCC------CcEEEEeCCCCCCCcCCCHHHHHHHHHhCCCCcEEEEECcHHHhccC
Confidence 99999884 4689999999988643 34777889999999999999999999875 8999999999654421
Q ss_pred Cccch--hhhcCCCCCCeeEEcCccccCC-CCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCccccCCCCC
Q 048643 295 CPEFQ--HFIDGVEGADSFSLNAHKWFFT-TLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRF 371 (506)
Q Consensus 295 ~~~~~--~~~~gi~~aDsi~~~~hK~l~~-p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~ 371 (506)
..... ..+. ...-..+..++.|.++. ...+|+++.++ +. .+.+...... +. .
T Consensus 202 ~~~~~~~~~~~-~~~~~i~~~S~SK~~g~~G~RiG~l~~~~-~~-~~~l~~~~~~----------------~~--~---- 256 (367)
T PRK02731 202 KDYEDGLELVA-KFPNVVVTRTFSKAYGLAGLRVGYGIAPP-EI-IDALNRVRQP----------------FN--V---- 256 (367)
T ss_pred cCcccHHHHHh-hcCCEEEEeeehHhhcCcccceeeeeCCH-HH-HHHHHHccCC----------------CC--C----
Confidence 11110 1111 11112334467798764 46788887753 22 2233211000 00 0
Q ss_pred CchHHHHHHHHhch-hHHHHHHHHHHHHHHHHHHHHHcCCCCc--c---ceEEEeecCCCcccccccccchHHHHHHHHH
Q 048643 372 RSLKLWLVIRNYGV-ANLRHFLRSHVNMAKLFERLVASDKRVS--P---SAVMDKLKPKYENCHSQQLVTEEEAINEFNR 445 (506)
Q Consensus 372 ~al~~~~~l~~~G~-~g~~~~i~~~~~~a~~l~~~l~~~~~~~--p---~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (506)
..+..+++.+.+.. +.+++..++..++.+++.+.|++. ++. | +.+++++.+. ....
T Consensus 257 ~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~g~~~~i~~~~~-----------------~~~~ 318 (367)
T PRK02731 257 NSLALAAAVAALDDDAFVEKSRALNAEGMAWLTEFLAEL-GLEYIPSVGNFILVDFDDG-----------------KDAA 318 (367)
T ss_pred CHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC-CCccCCCCceEEEEECCCC-----------------CCHH
Confidence 12344555555532 345677777788888999999887 666 4 6667766321 0134
Q ss_pred HHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 048643 446 ELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLE 496 (506)
Q Consensus 446 ~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~ 496 (506)
++.+.|.+.|+.......+....++|+++. +.+++++++++|+++.+
T Consensus 319 ~~~~~L~~~gI~v~~~~~~~~~~~iRis~~----~~~e~~~l~~aL~~~~~ 365 (367)
T PRK02731 319 EAYQALLKRGVIVRPVAGYGLPNALRITIG----TEEENRRFLAALKEFLA 365 (367)
T ss_pred HHHHHHHHCCEEEEeCCCCCCCCeEEEecC----CHHHHHHHHHHHHHHHh
Confidence 567777777864433322222468999984 56799999999988753
No 203
>PRK05939 hypothetical protein; Provisional
Probab=99.71 E-value=1.3e-15 Score=156.31 Aligned_cols=239 Identities=13% Similarity=0.095 Sum_probs=153.8
Q ss_pred ccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCch--
Q 048643 125 ISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHC-- 202 (506)
Q Consensus 125 ~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~-- 202 (506)
...|....+|++ ++++.|.. ..+++++|+.|+..++.+... ++..|+++...|.
T Consensus 44 ~g~p~~~~lE~~----la~leg~~---------~~v~~ssG~~Ai~~~l~all~-----------~Gd~Vv~~~~~y~~t 99 (397)
T PRK05939 44 QGTPTTAALEAK----ITKMEGGV---------GTVCFATGMAAIAAVFLTLLR-----------AGDHLVSSQFLFGNT 99 (397)
T ss_pred CCCHHHHHHHHH----HHHHhCCC---------eEEEeCCHHHHHHHHHHHHcC-----------CCCEEEECCCccccH
Confidence 356777788866 66777764 346777778777766655422 5566777777654
Q ss_pred -HHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCE
Q 048643 203 -ALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIW 281 (506)
Q Consensus 203 -s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~ 281 (506)
++.+.+...|+ +++.++. .|+++|++++++.+ .+|+++.++|++|.+.|+++|+++|+++|++
T Consensus 100 ~~~~~~l~~~G~---~v~~v~~-------~d~e~l~~~l~~~t------klV~vesp~NptG~v~dl~~I~~la~~~gi~ 163 (397)
T PRK05939 100 NSLFGTLRGLGV---EVTMVDA-------TDVQNVAAAIRPNT------RMVFVETIANPGTQVADLAGIGALCRERGLL 163 (397)
T ss_pred HHHHHHHHhcCC---EEEEECC-------CCHHHHHHhCCCCC------eEEEEECCCCCCCCHHhHHHHHHHHHHcCCE
Confidence 45556677788 8888874 37899999986543 4788899999999999999999999999999
Q ss_pred EEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCc-ceEEEEeCch-hHHhhhcCCccccCCccccCCCccC
Q 048643 282 VHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLD-CCCLWVKDPS-ALVSSLSTNPEYLKNKATESKQVVD 359 (506)
Q Consensus 282 lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~-~g~~~~r~~~-~l~~~~~~~~~yl~~~~~~~~~~~~ 359 (506)
++||++|+.+..+.+. . -++|.+..+.||+++.+-+ .|.+++.+.. ...........|....... .....
T Consensus 164 livD~t~a~~~~~~~~-~------~gaDivv~S~sK~~~g~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 235 (397)
T PRK05939 164 YVVDNTMTSPWLFRPK-D------VGASLVINSLSKYIAGHGNALGGAVTDTGLFDWSAYPNIFPAYRKGDPQQ-WGLTQ 235 (397)
T ss_pred EEEECCcccccccCcc-c------cCCEEEEecCeecccCCCCeEEEEEecCcccccccccchhhhhhccchhh-HHHHH
Confidence 9999999765432221 1 1799999999999997533 2333332221 0000000000110000000 00000
Q ss_pred CCC-ccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc
Q 048643 360 YKD-WQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS 413 (506)
Q Consensus 360 ~~~-~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~ 413 (506)
... .....+-...+...|..++ |.+-+..+++++.++|..+++.|+++|.++
T Consensus 236 ~~~~~~~~~G~~~~p~~a~l~~r--gl~tl~~R~~~~~~na~~la~~L~~~p~V~ 288 (397)
T PRK05939 236 IRKKGLRDMGATLSSEAAHRIAI--GAETLALRVDRSCSNALALAQFLEAHPKVA 288 (397)
T ss_pred HHHHHHHhcCCCCCHHHHHHHHc--CcCcHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 000 0001222234566676665 678899999999999999999999988765
No 204
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.71 E-value=1.6e-14 Score=150.13 Aligned_cols=310 Identities=12% Similarity=0.059 Sum_probs=188.0
Q ss_pred hHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHH
Q 048643 130 ATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQ 209 (506)
Q Consensus 130 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~ 209 (506)
....+.++.+.+++++|.+.+ ..++++||++||..++.++|... .++.+++.....|.+...+..
T Consensus 77 ~~~~~~~l~~~l~~~~~~~~~-------~v~~~~sgsea~~~al~~~~~~~--------~~~~ii~~~~~yhg~~~~~~~ 141 (413)
T cd00610 77 YNEPAVELAELLLALTPEGLD-------KVFFVNSGTEAVEAALKLARAYT--------GRKKIISFEGAYHGRTLGALS 141 (413)
T ss_pred CCHHHHHHHHHHHHhCCCCCC-------EEEEcCcHHHHHHHHHHHHHHHc--------CCCeEEEECCCcCCccHHHHH
Confidence 456777778889999885433 68999999999999999987531 033455555567766665554
Q ss_pred HhCCC---------CCCeEEEecCCC----CCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC----hhHHH
Q 048643 210 IVGID---------LKNFRAIKTTKS----SSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP----LKPLC 272 (506)
Q Consensus 210 ~~G~g---------~~~v~~v~~~~~----~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp----l~~I~ 272 (506)
..+-. ..+++.+|.+.. .++..|++.|++.+++. +..+.+|+++...+++|.+.| +++|.
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~ 218 (413)
T cd00610 142 LTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEEH---PEEVAAVIVEPIQGEGGVIVPPPGYLKALR 218 (413)
T ss_pred hcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHHHHHhcC---CCCEEEEEEccccCCCCCccCCHHHHHHHH
Confidence 43321 124667776521 12456899999988752 223556777777777898877 99999
Q ss_pred HHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccc
Q 048643 273 DVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKAT 352 (506)
Q Consensus 273 ~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~ 352 (506)
++|++||+++++|++|+++............++ ..|.++++ |+++.++.+|+++.+ ++. .+.+.. ..+...
T Consensus 219 ~l~~~~~~~li~Dev~~g~g~~g~~~~~~~~~~-~~d~~t~s--K~l~~g~~~g~~~~~-~~~-~~~~~~-~~~~~~--- 289 (413)
T cd00610 219 ELCRKHGILLIADEVQTGFGRTGKMFAFEHFGV-EPDIVTLG--KGLGGGLPLGAVLGR-EEI-MDAFPA-GPGLHG--- 289 (413)
T ss_pred HHHHHcCCEEEEeccccCCCcCcchhhHhhcCC-CCCeEEEc--ccccCccccEEEEEc-HHH-HHhhcc-CCCCCC---
Confidence 999999999999999986422111111111122 35665554 999988889988765 332 233300 000000
Q ss_pred cCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCC----Cc---c--ceEEEeecC
Q 048643 353 ESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKR----VS---P--SAVMDKLKP 423 (506)
Q Consensus 353 ~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~----~~---p--~~v~f~~~~ 423 (506)
. +. .+-......+..+++.+.. .++.++..++.+++.+.|++... .. + .++++.+.+
T Consensus 290 --------~--t~-~~~~~~~~a~~a~l~~l~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~ 355 (413)
T cd00610 290 --------G--TF-GGNPLACAAALAVLEVLEE---EGLLENAAELGEYLRERLRELAEKHPLVGDVRGRGLMIGIELVK 355 (413)
T ss_pred --------C--CC-CcCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhhCCcEEEeecCceEEEEEEec
Confidence 0 00 1111222344555655543 24556777788888888776421 11 2 566666643
Q ss_pred CCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHH
Q 048643 424 KYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQ 494 (506)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~ 494 (506)
.... . ... ......+.+.+.++|+. +.+.. ...+|++++ ...++++|+++++.|+++
T Consensus 356 ~~~~------~-~~~--~~~~~~~~~~l~~~gv~-v~~~~---~~~lR~~~~-~~~t~~~i~~~~~~l~~~ 412 (413)
T cd00610 356 DRAT------K-PPD--KELAAKIIKAALERGLL-LRPSG---GNVIRLLPP-LIITEEEIDEGLDALDEA 412 (413)
T ss_pred CCCc------C-Ccc--hHHHHHHHHHHHHCCeE-EeecC---CCEEEEECC-CcCCHHHHHHHHHHHHHh
Confidence 2100 0 000 12345677888888864 44432 457999984 556788999999999865
No 205
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.71 E-value=1.7e-15 Score=154.10 Aligned_cols=275 Identities=11% Similarity=0.048 Sum_probs=177.5
Q ss_pred HHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCC-eEEEeCCCCchHHHHHHHHhCCCCC
Q 048643 138 MDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISK-LVVYGSDQTHCALQKAAQIVGIDLK 216 (506)
Q Consensus 138 ~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~-~~v~~s~~~H~s~~ka~~~~G~g~~ 216 (506)
.+.+++.+|++.+ ..++|+|+++++...+.+... ++ ..|+++...+..+...++..|+
T Consensus 66 r~aia~~~~~~~~-------~I~it~Gs~~~i~~~~~~~~~-----------~g~d~vlv~~P~y~~y~~~~~~~g~--- 124 (354)
T PRK04635 66 INAYSAYAGVAPE-------QILTSRGADEAIELLIRAFCE-----------PGQDSIACFGPTYGMYAISAETFNV--- 124 (354)
T ss_pred HHHHHHHhCcCHH-------HEEEeCCHHHHHHHHHHHhcC-----------CCCCeEEEcCCChHHHHHHHHHcCC---
Confidence 3456666788765 789999999888766654322 33 6677888888888888999999
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHh-CCEEEeecccccccccC
Q 048643 217 NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQF-GIWVHVDAAYAGSACIC 295 (506)
Q Consensus 217 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~-g~~lhVDaA~gg~~~~~ 295 (506)
+++.||++. ++.+|++.+++ + +. +.+|+++.++|+||.+-|.+++.++++.. ++++++|++|..+...
T Consensus 125 ~v~~v~~~~--~~~~~~~~l~~-~-~~------~~li~i~nP~NPTG~~~~~~~l~~l~~~~~~~~vivDeay~~~~~~- 193 (354)
T PRK04635 125 GVKALPLTA--DYQLPLDYIEQ-L-DG------AKLVFICNPNNPTGTVIDRADIEQLIEMTPDAIVVVDEAYIEFCPE- 193 (354)
T ss_pred EEEEEecCC--CCCCCHHHHHh-c-cC------CCEEEEeCCCCCCCccCCHHHHHHHHHhCCCcEEEEeCchHhhccC-
Confidence 999999874 47899998863 3 22 34788889999999999999999999874 7999999999654311
Q ss_pred ccchhhhcCCCCCCeeEEcCccccC-CCCcceEEEEeCchhHHhhhcC-CccccCCccccCCCccCCCCccccCCCCCCc
Q 048643 296 PEFQHFIDGVEGADSFSLNAHKWFF-TTLDCCCLWVKDPSALVSSLST-NPEYLKNKATESKQVVDYKDWQITLSRRFRS 373 (506)
Q Consensus 296 ~~~~~~~~gi~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~a 373 (506)
............. .+..+++|+++ ....+|+++.. ++.. +.+.. ..+| . . ..
T Consensus 194 ~s~~~~~~~~~~~-iv~~S~SK~~~l~GlRlG~~i~~-~~~~-~~l~~~~~~~-----------------~--~----~~ 247 (354)
T PRK04635 194 YSVADLLASYPNL-VVLRTLSKAFALAGARCGFTLAN-EELI-EILMRVIAPY-----------------P--V----PL 247 (354)
T ss_pred cchHHHHhhCCCE-EEEechHHHhhhhHHHHhhhhCC-HHHH-HHHHhhcCCC-----------------C--C----CH
Confidence 1111111111121 35667899987 55667887764 3332 22221 1111 0 0 11
Q ss_pred hHHHHHHHHh---chhHHHHHHHHHHHHHHHHHHHHHcCCCCc--c---ceEEEeecCCCcccccccccchHHHHHHHHH
Q 048643 374 LKLWLVIRNY---GVANLRHFLRSHVNMAKLFERLVASDKRVS--P---SAVMDKLKPKYENCHSQQLVTEEEAINEFNR 445 (506)
Q Consensus 374 l~~~~~l~~~---G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~--p---~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (506)
....+++..+ |.+.+++.+++..+.++++.+.|++.++++ | +.+.+++. . ..
T Consensus 248 ~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~g~f~~~~~~-~-------------------~~ 307 (354)
T PRK04635 248 PVSEIATQALSEAGLARMKFQVLDLNAQGARLQAALSMYGGAKVLEGNGNYVLAKFD-D-------------------VD 307 (354)
T ss_pred HHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCceECCCCCcEEEEECC-C-------------------HH
Confidence 1112333333 334456666777778889999999886666 3 44444442 1 13
Q ss_pred HHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHH
Q 048643 446 ELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQ 494 (506)
Q Consensus 446 ~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~ 494 (506)
++.+.+.+.|+............++|+++. +++++++++++|++.
T Consensus 308 ~~~~~l~~~gv~v~~~~~~~~~~~lRis~~----~~e~~~~l~~al~~~ 352 (354)
T PRK04635 308 AVFKALWDAGIVARAYKDPRLANCIRFSFS----NRAETDKLIGLIRNQ 352 (354)
T ss_pred HHHHHHHHCCEEEEECCCCCCCCeEEEEeC----CHHHHHHHHHHHHHh
Confidence 455666667764432221223468999984 678999999999763
No 206
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.71 E-value=4.5e-15 Score=153.02 Aligned_cols=219 Identities=18% Similarity=0.177 Sum_probs=152.6
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchH--
Q 048643 126 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCA-- 203 (506)
Q Consensus 126 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s-- 203 (506)
..|...++|+ .++++.|.+ ..+++++|+.|+..++.+... ++..|+++...|..
T Consensus 63 ~~p~~~~le~----~lA~l~g~~---------~~i~~~sG~~Al~~~l~~ll~-----------~Gd~Viv~~~~y~~t~ 118 (403)
T PRK07503 63 SNPTLALLEQ----RMASLEGGE---------AAVALASGMGAITATLWTLLR-----------PGDEVIVDQTLYGCTF 118 (403)
T ss_pred CCchHHHHHH----HHHHHhCCC---------cEEEEcCHHHHHHHHHHHHcC-----------CCCEEEEccCccchHH
Confidence 4566666664 578888875 347788888887766654321 55667777776643
Q ss_pred --HHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCE
Q 048643 204 --LQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIW 281 (506)
Q Consensus 204 --~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~ 281 (506)
....+...|+ +++.++.+ |++.|++++++.++ +|++..+++++|.+-|+++|+++|+++|++
T Consensus 119 ~~~~~~~~~~G~---~v~~vd~~-------d~~~l~~~i~~~tk------lV~le~p~NPtG~~~di~~I~~la~~~gi~ 182 (403)
T PRK07503 119 AFLHHGLGEFGV---TVRHVDLT-------DPAALKAAISDKTR------MVYFETPANPNMRLVDIAAVAEIAHGAGAK 182 (403)
T ss_pred HHHHHHHhhCCE---EEEEeCCC-------CHHHHHHhcCccCc------EEEEeCCCCCCCeeeCHHHHHHHHHHcCCE
Confidence 3345566788 78877653 78999998876433 788888999999999999999999999999
Q ss_pred EEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCc--ceEEEEeCchhHHhhhcCCccccCCccccCCCccC
Q 048643 282 VHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLD--CCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVD 359 (506)
Q Consensus 282 lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 359 (506)
+++|++|+.+....+ . + -++|.++.+++|+++.+.+ +|+++ .+++... .+... ....
T Consensus 183 lIvD~a~a~~~~~~~-l-----~-~g~Di~v~S~tK~l~g~gd~~gG~v~-~~~~l~~-~l~~~--~~~~---------- 241 (403)
T PRK07503 183 VVVDNTYCTPYLQRP-L-----E-LGADLVVHSATKYLGGHGDITAGLVV-GGKALAD-RIRLE--GLKD---------- 241 (403)
T ss_pred EEEECCCcccccCCc-h-----h-hCCCEEEccccccccCCCceeEEEEE-cCHHHHH-HHHhh--hHHh----------
Confidence 999999976543211 1 1 1789999999999997754 66665 5544332 22110 0000
Q ss_pred CCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc
Q 048643 360 YKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS 413 (506)
Q Consensus 360 ~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~ 413 (506)
..+-+...+..|+.++ |.+.+..++++..+++..+.+.|+++|.++
T Consensus 242 ------~~g~~~s~~~a~l~l~--~L~tl~~r~~~~~~na~~~a~~L~~~p~v~ 287 (403)
T PRK07503 242 ------MTGAVMSPFDAFLLMR--GLKTLALRMDRHCASAQAVAEWLARHPAVE 287 (403)
T ss_pred ------CcCCCCCHHHHHHHHc--CcchHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 0112334566677766 557788889999999999999999987665
No 207
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.71 E-value=4.7e-15 Score=151.25 Aligned_cols=300 Identities=15% Similarity=0.087 Sum_probs=188.4
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHH
Q 048643 127 SPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQK 206 (506)
Q Consensus 127 ~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~k 206 (506)
++...++|+++ ++.+|.+ .++.+++||.|+..||.+..-. ++..|++|..+..+...
T Consensus 24 g~~~~~fE~~~----a~~~g~~---------~~~~~~sgt~Al~~al~~l~~~----------~gdeVi~p~~t~~~~~~ 80 (363)
T PF01041_consen 24 GPYVEEFEKEF----AEYFGVK---------YAVAVSSGTSALHLALRALGLG----------PGDEVIVPAYTFPATAS 80 (363)
T ss_dssp SHHHHHHHHHH----HHHHTSS---------EEEEESSHHHHHHHHHHHTTGG----------TTSEEEEESSS-THHHH
T ss_pred CHHHHHHHHHH----HHHhCCC---------eEEEeCChhHHHHHHHHhcCCC----------cCceEecCCCcchHHHH
Confidence 78889999874 5555543 5789999999999888874322 67789999999999999
Q ss_pred HHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeec
Q 048643 207 AAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDA 286 (506)
Q Consensus 207 a~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDa 286 (506)
++..+|+ +++.++++++ ++.||++.|+++|++.++ +|++++ ..|...|+++|.++|+++|++++-|+
T Consensus 81 ai~~~G~---~pv~~Di~~~-~~~id~~~~~~~i~~~t~------ai~~~h---~~G~~~d~~~i~~~~~~~~i~lIeD~ 147 (363)
T PF01041_consen 81 AILWAGA---EPVFVDIDPE-TLNIDPEALEKAITPKTK------AILVVH---LFGNPADMDAIRAIARKHGIPLIEDA 147 (363)
T ss_dssp HHHHTT----EEEEE-BETT-TSSB-HHHHHHHHHTTEE------EEEEE----GGGB---HHHHHHHHHHTT-EEEEE-
T ss_pred HHHHhcc---EEEEEeccCC-cCCcCHHHHHHHhccCcc------EEEEec---CCCCcccHHHHHHHHHHcCCcEEEcc
Confidence 9999999 9999999964 689999999999998764 566654 57888899999999999999999999
Q ss_pred ccccccccCccchhhhcCCCCCCeeEEcC--ccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCcc
Q 048643 287 AYAGSACICPEFQHFIDGVEGADSFSLNA--HKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQ 364 (506)
Q Consensus 287 A~gg~~~~~~~~~~~~~gi~~aDsi~~~~--hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~ 364 (506)
|++.+.... ....|- ..|..++++ .|.+.+ ...|++++++++...+.......-.... ....+.
T Consensus 148 a~a~g~~~~----g~~~G~-~gd~~~fSf~~~K~i~~-geGG~v~~~~~~~~~~~~~~~~~g~~~~--------~~~~~~ 213 (363)
T PF01041_consen 148 AQAFGARYK----GRPVGS-FGDIAIFSFHPTKIITT-GEGGAVVTNDPELAERARALRNHGRSRD--------AFRRYR 213 (363)
T ss_dssp TTTTT-EET----TEETTS-SSSEEEEESSTTSSS-S-SS-EEEEESTHHHHHHHHHHTBTTEETS--------ECSTTE
T ss_pred ccccCceeC----CEeccC-CCCceEecCCCCCCCcC-CCCeeEEecHHHHHHHhhhhhccCcCcc--------cccccc
Confidence 997765432 222221 346556665 588743 3468888888765433221110000000 000000
Q ss_pred cc--CCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc----c--------ceEEEeecCCCccccc
Q 048643 365 IT--LSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS----P--------SAVMDKLKPKYENCHS 430 (506)
Q Consensus 365 ~~--~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~----p--------~~v~f~~~~~~~~~~~ 430 (506)
-+ .+..++.-.+-+++-....+.+.+.+++..++++++.+.|...+++. | ..+.+++.+...
T Consensus 214 ~~~~~g~n~rm~~~~AAigl~QL~~L~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~---- 289 (363)
T PF01041_consen 214 HELPPGYNFRMSELQAAIGLAQLKRLDEIIARRRENAQRYREALAGIPGIKPPPIPDGAERSSYYRFPIRLPDEAL---- 289 (363)
T ss_dssp ESSSS--B-B-BHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTGTTEEEEGCGTTTEEBCESSEEEEETCCGC----
T ss_pred ccccCCcccccHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCccccccccccccccccccccccccccc----
Confidence 00 22223333333444333457789999999999999999999998875 2 134445443200
Q ss_pred ccccchHHHHHHHHHHHHHHHHhcCcEEEeeee--E------C----------------CEEEEEEEecCCCCCHHHHHH
Q 048643 431 QQLVTEEEAINEFNRELLESINASGKAYMTHAV--C------G----------------GIYAMRFAVGATLTEERHVMV 486 (506)
Q Consensus 431 ~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~--~------~----------------g~~~lR~~~~~~~tt~edi~~ 486 (506)
....++.+.|.+.|+-...... . . ....|-+-+ ++..+++|+++
T Consensus 290 -----------~~rd~l~~~L~~~GI~~~~~~~~pl~~~~~~~~~~~~~~~~~P~ae~l~~r~l~LP~-~~~lt~edv~~ 357 (363)
T PF01041_consen 290 -----------ADRDELVEALRARGIETRPHYPKPLHRQPVYRSYPYYAPGDLPNAERLSQRLLSLPI-HPRLTEEDVDY 357 (363)
T ss_dssp -----------STHHHHHHHHHHTTBEEBCSTSSCGGGSGGGTTGEEEETSSSHHHHHHHHHEEEEEH-STTSCHHHHHH
T ss_pred -----------chHHHHHHHHHHCCCcccccccCchhhhHHHHhcCccccCCCHHHHHHHhCeEECcC-CCCCCHHHHHH
Confidence 0135677788888874222110 0 0 023455544 78889999999
Q ss_pred HHHHHH
Q 048643 487 AWTMVQ 492 (506)
Q Consensus 487 li~~l~ 492 (506)
+++.|+
T Consensus 358 I~~~ir 363 (363)
T PF01041_consen 358 IAEAIR 363 (363)
T ss_dssp HHHHHH
T ss_pred HhhccC
Confidence 999875
No 208
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.71 E-value=1.3e-15 Score=154.01 Aligned_cols=338 Identities=13% Similarity=0.028 Sum_probs=206.2
Q ss_pred CHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHh
Q 048643 104 SIAGFLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNK 183 (506)
Q Consensus 104 ~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~ 183 (506)
.+|.+..+.+.. ........+|.+.++-+++.+.|.++++.|.+. ...++++|||.++-.++......
T Consensus 14 ~~~~~~~~~~~~---~~~~~~HRs~~F~~i~~e~~~~L~~l~~~~~~~-----~v~~l~GsGT~a~Eaa~~nl~~~---- 81 (374)
T TIGR01365 14 KRPGWSIEELKN---APLGRSHRSKLGKEKLAEAIKKTREMLGVPADY-----LIGIVPASDTGAVEMALWSMLGC---- 81 (374)
T ss_pred CCchhhHHHHhh---hhcccCcCCHHHHHHHHHHHHHHHHHhCCCCCc-----EEEEECCchHHHHHHHHHHcCCC----
Confidence 355554444443 222233468899999999999999999986542 14577899997776665543211
Q ss_pred hcccCCCCe-EEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCC
Q 048643 184 IGRENISKL-VVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAI 262 (506)
Q Consensus 184 ~~~~~~~~~-~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~t 262 (506)
++. ++.+...++.-..+.++.+|++ ++..+..++.. .+|++.++. . + -|++++..|.|
T Consensus 82 ------~g~~vLv~g~FG~r~~~eia~~~g~~--~v~~l~~~~g~--~~~~~~ve~----~-~------~v~~vhnETST 140 (374)
T TIGR01365 82 ------RGVDVLAWESFGKGWVTDVTKQLKLP--DVRVLEAEYGK--LPDLKKVDF----K-N------DVVFTWNGTTS 140 (374)
T ss_pred ------CCCeEEEECHHHHHHHHHHHHhcCCC--CcEEEcCCCCC--CCCHHHcCC----C-C------CEEEecCCCch
Confidence 333 3333322222233888889992 27777766543 789999873 1 1 26799999999
Q ss_pred CcccChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcC
Q 048643 263 TAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLST 342 (506)
Q Consensus 263 G~idpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~ 342 (506)
|...|+++|+..+ ++..++||+.=+.+...++- +++|.+..+.+|.|+.|.|.|+++++++..-+ ...
T Consensus 141 Gv~npv~~i~~~~--~~~lliVDavSs~g~~~l~~--------d~iDv~~tgsQK~L~~ppGls~v~vs~~Al~~--~~~ 208 (374)
T TIGR01365 141 GVRVPNGDFIPAD--REGLTICDATSAAFAQDLDY--------HKLDVVTFSWQKVLGGEGAHGMLILSPRAVAR--LES 208 (374)
T ss_pred heecccccccccc--CCCcEEEEccchhcCCCCCh--------hHCcEEEEechhccCCCCceEEEEECHHHHHH--Hhh
Confidence 9999998766433 58999999965554444321 25999999999999999999999999876532 221
Q ss_pred CccccCCcc-ccCCCccCCCCccccCCCCCC-c-hHHHHHHHH---hchh-HHHHHHHHHHHHHHHHHHHHHcCCCCc--
Q 048643 343 NPEYLKNKA-TESKQVVDYKDWQITLSRRFR-S-LKLWLVIRN---YGVA-NLRHFLRSHVNMAKLFERLVASDKRVS-- 413 (506)
Q Consensus 343 ~~~yl~~~~-~~~~~~~~~~~~~~~~sr~~~-a-l~~~~~l~~---~G~~-g~~~~i~~~~~~a~~l~~~l~~~~~~~-- 413 (506)
...|..... .+......+........-++. + ..+++.++. +-.+ |++++.+|+.++++.+++.+++.+.++
T Consensus 209 ~~~y~~~~~~~~~~~~~~~~~~~~~~~t~~TP~v~~l~a~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~l~~~ 288 (374)
T TIGR01365 209 YTPAWPLPKIFRLTKGGKLNKKIFEGSTINTPSMLCVEDWLDALKWAESIGGLKPLIARADDNLAVLEAFVAKNNWIHFL 288 (374)
T ss_pred cCCCCCChhhhccccccchhhhhhcCCCCCChHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCcccC
Confidence 112321100 000000000000000111111 1 333433333 3354 899999999999999999999985354
Q ss_pred ---c-----ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeee--eECCEEEEEEEecCCCCCHHH
Q 048643 414 ---P-----SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHA--VCGGIYAMRFAVGATLTEERH 483 (506)
Q Consensus 414 ---p-----~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~--~~~g~~~lR~~~~~~~tt~ed 483 (506)
+ .++++++.++... ..+......+..++++.+.++|+. +.++ ... ...||+..+. ..+.+|
T Consensus 289 ~~~~~~rS~tvt~v~~~~~~~~------~~~~~~~~~~~~~~~~~l~~~gi~-i~~G~~~~~-~~~fRIg~~G-~i~~~d 359 (374)
T TIGR01365 289 AETPEIRSNTSVCLKVVDPAID------ALDEDAQADFAKELISTLEKEGVA-YDIGSYRDA-PSGLRIWCGA-TVEKSD 359 (374)
T ss_pred CCChhhcCCCeEEEEeCCcccc------ccccchhhHHHHHHHHHHHHCCEE-EeccccccC-CCceEEecCC-cCCHHH
Confidence 1 5577776432100 000000112246678888888874 3333 233 3689999984 567779
Q ss_pred HHHHHHHHHHHH
Q 048643 484 VMVAWTMVQEQL 495 (506)
Q Consensus 484 i~~li~~l~~~~ 495 (506)
|+.+++.|+=+-
T Consensus 360 i~~l~~~l~~~~ 371 (374)
T TIGR01365 360 LECLCPWLDWAF 371 (374)
T ss_pred HHHHHHHHHHHH
Confidence 999999987543
No 209
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.71 E-value=3.9e-15 Score=152.34 Aligned_cols=221 Identities=17% Similarity=0.179 Sum_probs=154.0
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHH
Q 048643 126 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQ 205 (506)
Q Consensus 126 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 205 (506)
..|...++| +.++++.|.+ .+++++||++|+..++.+... ++..|+++...|.+..
T Consensus 49 ~~p~~~~le----~~lA~l~g~~---------~v~~~~gg~~Ai~~~l~all~-----------~GD~Vl~~~p~y~~~~ 104 (382)
T TIGR02080 49 GNPTRDLLQ----QALAELEGGA---------GAVVTNTGMSAIHLVTTALLG-----------PDDLLVAPHDCYGGTY 104 (382)
T ss_pred CCchHHHHH----HHHHHHhCCC---------cEEEEcCHHHHHHHHHHHHcC-----------CCCEEEEcCCCcHHHH
Confidence 445556665 4577777732 578999999888776665432 5667888888887655
Q ss_pred HHHH-HhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEe
Q 048643 206 KAAQ-IVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHV 284 (506)
Q Consensus 206 ka~~-~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhV 284 (506)
..+. +.+.+.-++..++ ..|++.+++++++.+ .+|+++.++|++|.+-|+++|+++|+++|++++|
T Consensus 105 ~~~~~~~~~~~~~v~~~d-------~~d~~~l~~ai~~~t------klV~l~~p~NPtG~~~dl~~I~~la~~~g~~vvv 171 (382)
T TIGR02080 105 RLLNALAKKGCFRVLFVD-------QGDEQALRAALAQKP------KLVLIETPSNPLLRVVDIAKICHLAKAVGAVVVV 171 (382)
T ss_pred HHHHHHHhhcCeEEEEEC-------CCCHHHHHHhcCcCc------eEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEE
Confidence 4432 2333111444443 237899999887543 4788899999999999999999999999999999
Q ss_pred ecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCc--ceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCC
Q 048643 285 DAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLD--CCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKD 362 (506)
Q Consensus 285 DaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~ 362 (506)
|++|+.+....+ .. .++|.++.+++||++.+.+ .|++.++++.... .+.....++
T Consensus 172 D~a~~~~~~~~p-l~------~gaDivv~S~sK~l~G~~~~~~G~i~~~~~~~~~-~l~~~~~~~--------------- 228 (382)
T TIGR02080 172 DNTFLSPALQNP-LA------LGADLVLHSCTKYLNGHSDVIAGAVIAKDPQVAE-ELAWWANNL--------------- 228 (382)
T ss_pred ECCCcccccCCc-hh------hCCCEEEeecceeccCCCCceeEEEEeCCHHHHH-HHHHHHHcc---------------
Confidence 999976543222 11 1689999999999987765 7777776665432 221111111
Q ss_pred ccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc
Q 048643 363 WQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS 413 (506)
Q Consensus 363 ~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~ 413 (506)
+....++..|..++ |.+-+..+++++.+++..+.+.|+++|.++
T Consensus 229 -----g~~~sp~~a~l~lr--~l~tl~~R~~~~~~na~~~a~~L~~~p~v~ 272 (382)
T TIGR02080 229 -----GVTGGAFDSYLTLR--GLRTLVARMRLQQRNAQAIVEYLQTQPLVK 272 (382)
T ss_pred -----CCCCCHHHHHHHHc--ccchHHHHHHHHHHHHHHHHHHHHhCCCee
Confidence 11235567787776 567888889999999999999999887665
No 210
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.70 E-value=9.3e-15 Score=149.03 Aligned_cols=284 Identities=13% Similarity=0.079 Sum_probs=182.5
Q ss_pred hhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHH
Q 048643 128 PAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKA 207 (506)
Q Consensus 128 p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka 207 (506)
+...+++ +++++.++.+.+ ..++|+|+++++..++.+..+ ++..|+++..++..+...
T Consensus 64 ~g~~~lr----~~ia~~~~~~~~-------~i~~t~G~~~~l~~~~~~~~~-----------~gd~v~~~~p~y~~~~~~ 121 (359)
T PRK03158 64 GYAPELR----TKVAKHLGVDEE-------QLLFGAGLDEVIQMISRALLN-----------PGTNTVMAEPTFSQYRHN 121 (359)
T ss_pred CcHHHHH----HHHHHHhCCCHH-------HEEECCCHHHHHHHHHHHHhC-----------CCCEEEEcCCCHHHHHHH
Confidence 3444555 455555676554 688999988877554443322 556788888899888899
Q ss_pred HHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHH--hCCEEEee
Q 048643 208 AQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQ--FGIWVHVD 285 (506)
Q Consensus 208 ~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~--~g~~lhVD 285 (506)
+...|. +++.+|++ ++.+|++.|++++++. +.+|+++.++|+||.+-|.++|.++++. +|+++++|
T Consensus 122 ~~~~g~---~~~~~~~~---~~~~d~~~l~~~~~~~------~~~v~i~~p~NPtG~~~~~~~l~~~~~~~~~~~~ii~D 189 (359)
T PRK03158 122 AIIEGA---EVREVPLK---DGGHDLEAMLKAIDEQ------TKIVWICNPNNPTGTYVNHEELLSFLESVPSHVLVVLD 189 (359)
T ss_pred HHHcCC---eEEEEecC---CCCcCHHHHHHhcCCC------CCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEE
Confidence 999999 99999987 3589999999887543 2367778999999999999999999987 59999999
Q ss_pred cccccccccCc--cchhhhcCCCCCCeeEEcCccccCCC-CcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCC
Q 048643 286 AAYAGSACICP--EFQHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKD 362 (506)
Q Consensus 286 aA~gg~~~~~~--~~~~~~~gi~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~ 362 (506)
.+|..+..... ..-..+... .-..+..++.|.++.| ..+|+++... ..+ +.+......
T Consensus 190 e~y~~~~~~~~~~~~~~~~~~~-~~vi~~~S~SK~~g~~GlRiG~~v~~~-~~~-~~~~~~~~~---------------- 250 (359)
T PRK03158 190 EAYYEYVTAEDYPDTLPLLEKY-ENLIVLRTFSKAYGLAALRVGYGIASE-ELI-EKLNIARPP---------------- 250 (359)
T ss_pred CchHhhcCCcccccHHHHHHhc-CCEEEEEechHhhcCcchhhehhcCCH-HHH-HHHHHhcCC----------------
Confidence 99976543211 100111111 1234456788999854 6678876543 222 223211000
Q ss_pred ccccCCCCCCchHHHHHHHHhc-hhHHHHHHHHHHHHHHHHHHHHHcCCCCc--c---ceEEEeecCCCcccccccccch
Q 048643 363 WQITLSRRFRSLKLWLVIRNYG-VANLRHFLRSHVNMAKLFERLVASDKRVS--P---SAVMDKLKPKYENCHSQQLVTE 436 (506)
Q Consensus 363 ~~~~~sr~~~al~~~~~l~~~G-~~g~~~~i~~~~~~a~~l~~~l~~~~~~~--p---~~v~f~~~~~~~~~~~~~~~~~ 436 (506)
+ ....+...++...+. .+.+++..+...+..+++.+.|++. ++. | +.+.++....
T Consensus 251 ~------~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~g~~i~~~~~~~------------ 311 (359)
T PRK03158 251 F------NTTRIAQYAAIAALEDQAFLKECVEKNAEGLEQYYAFCKEY-GLFYYPSQTNFIFVDTGRD------------ 311 (359)
T ss_pred C------CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCeeCCCcCcEEEEECCCC------------
Confidence 0 012233334444442 2345555666677778888888877 665 4 4444443111
Q ss_pred HHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHH
Q 048643 437 EEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQ 494 (506)
Q Consensus 437 ~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~ 494 (506)
..++.+.+.+.|+.+..+..+....++|++++ +.+++++++++|+++
T Consensus 312 -------~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~~~----~~~~~~~l~~al~~~ 358 (359)
T PRK03158 312 -------ANELFEALLKKGYIVRSGAALGFPTGVRITIG----LKEQNDKIIELLKEL 358 (359)
T ss_pred -------HHHHHHHHHHCCeEEeeCCCCCCCCeEEEecC----CHHHHHHHHHHHHHh
Confidence 24566777777865444333434578999985 677999999999875
No 211
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.70 E-value=6.6e-15 Score=150.79 Aligned_cols=283 Identities=12% Similarity=0.053 Sum_probs=182.8
Q ss_pred HHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCCC
Q 048643 136 IVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGIDL 215 (506)
Q Consensus 136 ~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~ 215 (506)
.+.+++++.+|++.+ ..++|+|+++++...+.+... ++..|++...++......++..|+
T Consensus 75 ~lr~~ia~~~~~~~~-------~i~~t~G~~~~l~~~~~~~~~-----------~gd~vli~~P~y~~~~~~~~~~g~-- 134 (371)
T PRK05166 75 ALREAIAARTGVPAD-------RIILGNGSEDLIAVICRAVLR-----------PGDRVVTLYPSFPLHEDYPTMMGA-- 134 (371)
T ss_pred HHHHHHHHHhCcCHH-------HEEEcCCHHHHHHHHHHHhcC-----------CCCEEEEcCCChHHHHHHHHHcCC--
Confidence 355667778888654 788999888877555444321 566788888999988899999999
Q ss_pred CCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHH--hCCEEEeecccccccc
Q 048643 216 KNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQ--FGIWVHVDAAYAGSAC 293 (506)
Q Consensus 216 ~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~--~g~~lhVDaA~gg~~~ 293 (506)
+++.+|.+. ++.+|+++|++++++.+ .+|+++.++|+||.+-|.+++.++++. +++++++|++|+.+.
T Consensus 135 -~~~~v~~~~--~~~~~~~~l~~~~~~~~------~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~ii~De~y~~~~- 204 (371)
T PRK05166 135 -RVERVTVTP--DLGFDLDALCAAVARAP------RMLMFSNPSNPVGSWLTADQLARVLDATPPETLIVVDEAYAEYA- 204 (371)
T ss_pred -eEEEeecCC--CCCCCHHHHHHhhhcCC------CEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECcHHHhc-
Confidence 999999875 46899999999887643 367789999999999888777777764 478999999997654
Q ss_pred cCccchhhhcCCC-CC--CeeEEcCccccC-CCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCccccCCC
Q 048643 294 ICPEFQHFIDGVE-GA--DSFSLNAHKWFF-TTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSR 369 (506)
Q Consensus 294 ~~~~~~~~~~gi~-~a--Dsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr 369 (506)
........+..+. .- -.+..++.|.++ .....|++++.++... +.+.....+. .
T Consensus 205 ~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~~~~~l~-~~~~~~~~~~----------------~----- 262 (371)
T PRK05166 205 AGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVSDPELV-GLLDRVRTPF----------------N----- 262 (371)
T ss_pred CCcCcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeecCCHHHH-HHHHHhccCC----------------C-----
Confidence 2111111111111 11 134566899998 5567888777665433 2332110000 0
Q ss_pred CCCchHHHHHHHHh-chhHHHHHHHHHHHHHHHHHHHHHcCCCCc--c---ceEEEeecCCCcccccccccchHHHHHHH
Q 048643 370 RFRSLKLWLVIRNY-GVANLRHFLRSHVNMAKLFERLVASDKRVS--P---SAVMDKLKPKYENCHSQQLVTEEEAINEF 443 (506)
Q Consensus 370 ~~~al~~~~~l~~~-G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~--p---~~v~f~~~~~~~~~~~~~~~~~~~~~~~~ 443 (506)
...+...+++..+ ..+.+++.++...+..+++.+.|++. +++ | +.+.++....
T Consensus 263 -~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~p~~g~fl~~~~~~~------------------- 321 (371)
T PRK05166 263 -VNGAAQAAALAALDDEEHLAKGVALALAERERLKKELAEM-GYRIAPSRANFLFFDARRP------------------- 321 (371)
T ss_pred -CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-cCeeCCCcCCEEEEeCCCC-------------------
Confidence 0112112223322 23456777777888888899999887 666 4 4443332111
Q ss_pred HHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 048643 444 NRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQL 495 (506)
Q Consensus 444 ~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~ 495 (506)
..++.+.+.++|+............++|++++ +.++.+++.++|+++.
T Consensus 322 ~~~l~~~l~~~gi~v~p~~~~~~~~~iRi~~~----~~~~~~~l~~~l~~i~ 369 (371)
T PRK05166 322 ASAVAEALLRQGVIVKPWKQPGFETFIRVSIG----SPEENDHFVAALDKVL 369 (371)
T ss_pred HHHHHHHHHHCCeEEecCCCCCCCCeEEEEcC----CHHHHHHHHHHHHHHh
Confidence 24567777777864433322233678999995 4557888888887764
No 212
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.70 E-value=3.6e-15 Score=152.40 Aligned_cols=217 Identities=18% Similarity=0.221 Sum_probs=150.3
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHH
Q 048643 126 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQ 205 (506)
Q Consensus 126 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 205 (506)
..|....+|+ .++++.|.+ ..+++++|+.++..++ .... ++..|+++...|.+..
T Consensus 48 ~~p~~~~Le~----~lA~l~g~~---------~~~~~~sG~aai~~~~-~~l~-----------~Gd~Viv~~~~y~~~~ 102 (377)
T PRK07671 48 GNPTRAALEE----LIAVLEGGH---------AGFAFGSGMAAITAVM-MLFS-----------SGDHVILTDDVYGGTY 102 (377)
T ss_pred CChHHHHHHH----HHHHHhCCC---------ceEEeCCHHHHHHHHH-HHhC-----------CCCEEEECCCccchHH
Confidence 4565666664 578888865 3477777776554332 2211 5566788888776443
Q ss_pred H----HHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCE
Q 048643 206 K----AAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIW 281 (506)
Q Consensus 206 k----a~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~ 281 (506)
+ .+...|+ +++.++. .|+++|+++|+++++ +|+++.++|++|.+.|+++|+++|+++|++
T Consensus 103 ~~~~~~~~~~G~---~v~~v~~-------~d~~~l~~ai~~~tk------lV~le~P~NPtg~~~dl~~I~~la~~~g~~ 166 (377)
T PRK07671 103 RVMTKVLNRFGI---EHTFVDT-------SNLEEVEEAIRPNTK------AIYVETPTNPLLKITDIKKISTIAKEKGLL 166 (377)
T ss_pred HHHHHHHhcCCe---EEEEECC-------CCHHHHHHhcCCCCe------EEEEECCCCCCCcccCHHHHHHHHHHcCCE
Confidence 3 3344677 7777763 388999999876543 788899999999999999999999999999
Q ss_pred EEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCc--ceEEEEeCchhHHhhhcCCccccCCccccCCCccC
Q 048643 282 VHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLD--CCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVD 359 (506)
Q Consensus 282 lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 359 (506)
++||++|+......+ .. .++|.++.+++||++.|.+ .|+++++++....+ +.....+.
T Consensus 167 lvvD~a~~~~~~~~p-~~------~g~Divv~S~sK~l~G~~~~~~G~~v~~~~~l~~~-~~~~~~~~------------ 226 (377)
T PRK07671 167 TIVDNTFMTPYWQSP-IS------LGADIVLHSATKYLGGHSDVVAGLVVVNSPELAED-LHFVQNST------------ 226 (377)
T ss_pred EEEECCCCccccCCh-hh------hCCeEEEecCcccccCCccceeEEEEeCcHHHHHH-HHHHHHhh------------
Confidence 999999976443221 11 1789999999999998854 56677766544322 21110111
Q ss_pred CCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc
Q 048643 360 YKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS 413 (506)
Q Consensus 360 ~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~ 413 (506)
+-.......|..++ |.+.+..++++..+++..+.+.|++.|+++
T Consensus 227 --------g~~~~~~~a~l~~~--~l~tl~~R~~~~~~na~~la~~L~~~~~v~ 270 (377)
T PRK07671 227 --------GGILGPQDSWLLLR--GLKTLGIRMEEHETNSRAIAEFLNNHPAVN 270 (377)
T ss_pred --------cCCCCHHHHHHHHc--CcChHHHHHHHHHHHHHHHHHHHHcCCCee
Confidence 11223456677666 456677899999999999999999987764
No 213
>PRK09148 aminotransferase; Validated
Probab=99.70 E-value=2.5e-14 Score=148.12 Aligned_cols=312 Identities=12% Similarity=0.044 Sum_probs=192.6
Q ss_pred cccccChhhHHHHHHHHHHHHHHcCCCCccccCCCC-cEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCC
Q 048643 122 FNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNG-GGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQT 200 (506)
Q Consensus 122 ~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~-~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~ 200 (506)
..|....+..++.+.+.+|+.+.+|.+.+. . ..++|+|+++++..++.+..+ ++..|+++..+
T Consensus 62 ~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~-----~~~I~it~G~~~al~~~~~~l~~-----------~gd~Vl~~~P~ 125 (405)
T PRK09148 62 HRYSASKGIPGLRRAQAAYYARRFGVKLNP-----DTQVVATLGSKEGFANMAQAITA-----------PGDVILCPNPS 125 (405)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCCCC-----CCcEEEcCChHHHHHHHHHHhcC-----------CCCEEEEcCCC
Confidence 455555567899999999999888865321 2 578999999888766655433 56678888899
Q ss_pred chHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccCh---hHHHHHHHH
Q 048643 201 HCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPL---KPLCDVAKQ 277 (506)
Q Consensus 201 H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl---~~I~~ia~~ 277 (506)
+..+...+...|. +++.||++.++.+ ++.++++++... ..+.+|+.+.++|+||.+-+. ++|+++|++
T Consensus 126 y~~~~~~~~~~g~---~v~~v~~~~~~~~---~~~l~~~~~~~~---~~~~~v~l~~P~NPtG~~~s~~~l~~l~~~a~~ 196 (405)
T PRK09148 126 YPIHAFGFIMAGG---VIRSVPAEPDEEF---FPALERAVRHSI---PKPIALIVNYPSNPTAYVADLDFYKDVVAFAKK 196 (405)
T ss_pred CcccHHHHHhcCC---EEEEEeCCCCCCC---ccCHHHHHhhcc---ccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHH
Confidence 9988888899999 9999998754333 445555554321 135688889999999999764 788899999
Q ss_pred hCCEEEeecccccccccCccchhh--hcCCCCCCeeEEcCccccCCC-CcceEEEEeCchhHHhhhcCCccccCCccccC
Q 048643 278 FGIWVHVDAAYAGSACICPEFQHF--IDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSALVSSLSTNPEYLKNKATES 354 (506)
Q Consensus 278 ~g~~lhVDaA~gg~~~~~~~~~~~--~~gi~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~ 354 (506)
||+|+++|.+|+.+..-....... +.+......+..++.|.++.| .-+|+++. ++... +.+.....+...
T Consensus 197 ~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~~~pGlR~G~~v~-~~~~i-~~l~~~~~~~~~----- 269 (405)
T PRK09148 197 HDIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTFSMAGWRMGFAVG-NERLI-AALTRVKSYLDY----- 269 (405)
T ss_pred cCeEEEEeccchhhhcCCCCCCChhhCCCccCcEEEEeccccccCCcchheeeeeC-CHHHH-HHHHHHHHHhcc-----
Confidence 999999999997653211111111 111111223467789999844 66888865 33332 233211111110
Q ss_pred CCccCCCCccccCCCCCCchHHHHHHHHh--chhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c--c-eEEEeecCCCc
Q 048643 355 KQVVDYKDWQITLSRRFRSLKLWLVIRNY--GVANLRHFLRSHVNMAKLFERLVASDKRVS---P--S-AVMDKLKPKYE 426 (506)
Q Consensus 355 ~~~~~~~~~~~~~sr~~~al~~~~~l~~~--G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p--~-~v~f~~~~~~~ 426 (506)
+ . ..+.-.++...+ +.+.++++.+...+..+++.+.|++. ++. | + .+.+++.+..
T Consensus 270 ---------~--~----~~~~q~~~~~~L~~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~~p~~g~f~~~~l~~~~- 332 (405)
T PRK09148 270 ---------G--A----FTPIQVAATAALNGPQDCIAEMRELYKKRRDVLVESFGRA-GWDIPPPAASMFAWAPIPEAF- 332 (405)
T ss_pred ---------C--C----ChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHc-CCccCCCCeeEEEEEECCCcc-
Confidence 0 0 111222223333 23456667777788888999999886 565 5 3 3334443210
Q ss_pred ccccccccchHHHHHHHHHHHHHHHH-hcCcEEEeeeeEC--CEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 048643 427 NCHSQQLVTEEEAINEFNRELLESIN-ASGKAYMTHAVCG--GIYAMRFAVGATLTEERHVMVAWTMVQEQLEAF 498 (506)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l 498 (506)
+ +....++.+.+. +.|+....+..+. +..++|+++. .+.+.+.+.++.|.++.++.
T Consensus 333 ---------~----~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ri~~~---~~~~~l~~al~~l~~~l~~~ 391 (405)
T PRK09148 333 ---------R----HLGSLEFSKLLVEKADVAVAPGVGFGEHGDGYVRIALV---ENEQRIRQAARNIKRFLSSA 391 (405)
T ss_pred ---------C----CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEec---CCHHHHHHHHHHHHHHHHHH
Confidence 0 000134555554 4576544433332 3578999985 25678888887777766544
No 214
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.70 E-value=2e-14 Score=147.10 Aligned_cols=291 Identities=13% Similarity=0.032 Sum_probs=190.6
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHH
Q 048643 127 SPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQK 206 (506)
Q Consensus 127 ~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~k 206 (506)
.+....+.+.+.+|+.+.+|.+.+. ...++|+|+++++..++.+..+ ++..|++...++..+..
T Consensus 64 ~~g~~~lr~aia~~~~~~~~~~~~~-----~~I~it~G~~~~l~~~~~~~~~-----------~gd~v~v~~P~y~~~~~ 127 (368)
T PRK03317 64 DRDAVALRADLAAYLTAQTGVGLTV-----ENVWAANGSNEILQQLLQAFGG-----------PGRTALGFVPSYSMHPI 127 (368)
T ss_pred CCchHHHHHHHHHHhhhhccCCCCh-----hhEEECCCHHHHHHHHHHHhcC-----------CCCEEEEeCCChHHHHH
Confidence 3456789999999999888765332 3788889988888766665433 56677788889988899
Q ss_pred HHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeec
Q 048643 207 AAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDA 286 (506)
Q Consensus 207 a~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDa 286 (506)
+++..|. +++.+|.++ ++.+|+++|++++.+.. +.+|+++.++|+||.+-+.+++.++|+.+++++++|.
T Consensus 128 ~~~~~g~---~~~~~~~~~--~~~~d~~~l~~~~~~~~-----~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~lI~DE 197 (368)
T PRK03317 128 IARGTHT---EWVEGPRAA--DFTLDVDAAVAAIAEHR-----PDVVFLTSPNNPTGTALPLDDVEAILDAAPGIVVVDE 197 (368)
T ss_pred HHHhcCC---eeEEcccCC--CCCCCHHHHHHHHhccC-----CCEEEEeCCCCCCCCCCCHHHHHHHHHHCCceEEEeC
Confidence 9988888 888887653 57899999999987431 2266778899999999999999999999999999999
Q ss_pred ccccccccC-ccchhhhcCCCCCCee-EEcCccccCC-CCcceEEEEeCchhHHhhhcC-CccccCCccccCCCccCCCC
Q 048643 287 AYAGSACIC-PEFQHFIDGVEGADSF-SLNAHKWFFT-TLDCCCLWVKDPSALVSSLST-NPEYLKNKATESKQVVDYKD 362 (506)
Q Consensus 287 A~gg~~~~~-~~~~~~~~gi~~aDsi-~~~~hK~l~~-p~~~g~~~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~ 362 (506)
+|+.+.... +........ .-+.+ ..++.|.++. ...+|+++.. +.. ...+.. ...|
T Consensus 198 ~y~~~~~~~~~~~~~~~~~--~~~~i~~~SfSK~~g~~GlRiG~~~~~-~~~-~~~l~~~~~~~---------------- 257 (368)
T PRK03317 198 AYAEFRRSGTPSALTLLPE--YPRLVVSRTMSKAFAFAGGRLGYLAAA-PAV-VDALRLVRLPY---------------- 257 (368)
T ss_pred CchhhcccCCcCHHHHHHh--CCCEEEEEechhhhccchhhhhhhhCC-HHH-HHHHHhcCCCC----------------
Confidence 998653211 111111111 12344 4478999974 4567777653 332 233321 1001
Q ss_pred ccccCCCCCCchHHHHHHHHhc-hhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c--ceEEEeecCCCcccccccccch
Q 048643 363 WQITLSRRFRSLKLWLVIRNYG-VANLRHFLRSHVNMAKLFERLVASDKRVS---P--SAVMDKLKPKYENCHSQQLVTE 436 (506)
Q Consensus 363 ~~~~~sr~~~al~~~~~l~~~G-~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p--~~v~f~~~~~~~~~~~~~~~~~ 436 (506)
. ...+...++...+. .+.+.+.+++..+..+++.+.|++. +++ | +.+.|...+.
T Consensus 258 -~------~s~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~------------ 317 (368)
T PRK03317 258 -H------LSAVTQAAARAALRHADELLASVAALRAERDRVVAWLREL-GLRVAPSDANFVLFGRFAD------------ 317 (368)
T ss_pred -C------CCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHC-CCEeCCCCCcEEEEeccCC------------
Confidence 0 11222222333331 2344555666677788888888876 666 3 4444421111
Q ss_pred HHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 048643 437 EEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEA 497 (506)
Q Consensus 437 ~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~ 497 (506)
...+.+.+.++|+. +.+. ....++|+++. +.+++++++++|+++.+.
T Consensus 318 -------~~~~~~~l~~~Gv~-v~~~--~~~~~iRi~~~----~~~~~~~~~~~l~~~~~~ 364 (368)
T PRK03317 318 -------RHAVWQGLLDRGVL-IRDV--GIPGWLRVTIG----TPEENDAFLAALAEVLAT 364 (368)
T ss_pred -------HHHHHHHHHHCCEE-EEeC--CCCCeEEEecC----CHHHHHHHHHHHHHHHHH
Confidence 24566777778864 4432 22468999974 566899999999987654
No 215
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.70 E-value=1.5e-14 Score=151.04 Aligned_cols=297 Identities=13% Similarity=0.091 Sum_probs=190.7
Q ss_pred ccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCch
Q 048643 123 NWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHC 202 (506)
Q Consensus 123 ~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~ 202 (506)
.|....+..++.+.+.+|+.+.++.+ + ..++|+|+++++..++.+..+ ++..|++...++.
T Consensus 116 ~Y~~~~g~~~lr~~ia~~~~~~~~~~-~-------~Iiit~G~~~al~~~~~~l~~-----------pgd~Vlv~~P~y~ 176 (431)
T PRK15481 116 LYGDAPVSPELHAWAARWLRDDCPVA-F-------EIDLTSGAIDAIERLLCAHLL-----------PGDSVAVEDPCFL 176 (431)
T ss_pred hcCCcCCCHHHHHHHHHHHhhccCCc-C-------eEEEecCcHHHHHHHHHHhCC-----------CCCEEEEeCCCcH
Confidence 34444445677777778876644322 1 688999998888776665443 5677888999999
Q ss_pred HHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEe-ccCCCCCcccChh---HHHHHHHHh
Q 048643 203 ALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCAT-IGTTAITAVDPLK---PLCDVAKQF 278 (506)
Q Consensus 203 s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t-~gtt~tG~idpl~---~I~~ia~~~ 278 (506)
.+...++..|+ +++.||++++ .+|++.|++++++. +.+++++ .++|+||.+-+.+ +|.++|++|
T Consensus 177 ~~~~~~~~~g~---~~~~v~~~~~---g~~~~~l~~~~~~~------~k~i~~~p~p~NPTG~~~s~~~~~~l~~la~~~ 244 (431)
T PRK15481 177 SSINMLRYAGF---SASPVSVDAE---GMQPEKLERALAQG------ARAVILTPRAHNPTGCSLSARRAAALRNLLARY 244 (431)
T ss_pred HHHHHHHHcCC---eEEeeccCCC---CCCHHHHHHHHhcC------CCEEEECCCCCCCCCccCCHHHHHHHHHHHHhc
Confidence 99999999999 9999999742 48999999988653 2255555 8999999997765 999999999
Q ss_pred -CCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCc
Q 048643 279 -GIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQV 357 (506)
Q Consensus 279 -g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~ 357 (506)
++|+++|.+|+-+.. .+ ....+.....--.+..++.|.++....+|+++.. +.. ...+.....+...
T Consensus 245 ~~~~ii~De~Y~~~~~-~~-~~~~~~~~~~~vi~~~SfSK~~~~GlRiG~~i~~-~~~-~~~~~~~~~~~~~-------- 312 (431)
T PRK15481 245 PQVLVIIDDHFALLSS-SP-YHSVIPQTTQRWALIRSVSKALGPDLRLAFVASD-SAT-SARLRLRLNSGTQ-------- 312 (431)
T ss_pred CCceEEecCchhhhcc-CC-CCCCCcCCCCCEEEEeeeccccCCCceeEEEeCC-HHH-HHHHHHHHhcccc--------
Confidence 999999999975532 11 1111111111124556688999955778876653 322 2223211001000
Q ss_pred cCCCCccccCCCCCCchHHHHHHHHhch----hHHHHHHHHHHHHHHHHHHHHHcCCCCc---c---ceEEEeecCCCcc
Q 048643 358 VDYKDWQITLSRRFRSLKLWLVIRNYGV----ANLRHFLRSHVNMAKLFERLVASDKRVS---P---SAVMDKLKPKYEN 427 (506)
Q Consensus 358 ~~~~~~~~~~sr~~~al~~~~~l~~~G~----~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p---~~v~f~~~~~~~~ 427 (506)
+ ...+..+++...+.. +.++++.+...+..+++.+.|++. +++ | +.+.+++...
T Consensus 313 ---------~---~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~~~-~~~~~~p~gg~f~~~~l~~~--- 376 (431)
T PRK15481 313 ---------W---VSHLLQDLVYACLTDPEYQARLAQARLFYAQRRQKLARALQQY-GIAIPSPGDGLNLWLPLDTD--- 376 (431)
T ss_pred ---------C---CCHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCeEEEEEECCCC---
Confidence 0 112233333443322 235667777788888898999876 555 5 3344444221
Q ss_pred cccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeEC---CEEEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 048643 428 CHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCG---GIYAMRFAVGATLTEERHVMVAWTMVQEQLE 496 (506)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~---g~~~lR~~~~~~~tt~edi~~li~~l~~~~~ 496 (506)
..++.+.+.+.|+.+..+..+. +..++|++++. .++++++.+++.|.++.+
T Consensus 377 ----------------~~~~~~~l~~~gV~v~pg~~f~~~~~~~~iRis~~~--~~~~~i~~~~~~l~~~~~ 430 (431)
T PRK15481 377 ----------------SQATALTLAKSGWLVREGEAFGVSAPSHGLRITLST--LNDAEINRLAADLHQALN 430 (431)
T ss_pred ----------------HHHHHHHHHHCCcEEecCCccccCCCCCeEEEEcCC--CChHHHHHHHHHHHHHhc
Confidence 2345666667787655443331 23589999965 357799999999988753
No 216
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.69 E-value=5.4e-15 Score=151.20 Aligned_cols=218 Identities=17% Similarity=0.199 Sum_probs=149.9
Q ss_pred ccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHH
Q 048643 125 ISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCAL 204 (506)
Q Consensus 125 ~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~ 204 (506)
...|....+|+. ++++.|.+ ..+++++|+.|+..++ .+.. ++..|+++...|.+.
T Consensus 47 ~~~p~~~~Le~~----la~l~g~~---------~al~~~SG~~Al~~~l-~~l~-----------pGd~Vi~~~~~y~~t 101 (380)
T PRK06176 47 SGNPTRFALEEL----IADLEGGV---------KGFAFASGLAGIHAVF-SLFQ-----------SGDHVLLGDDVYGGT 101 (380)
T ss_pred CCChhHHHHHHH----HHHHhCCC---------CEEEECCHHHHHHHHH-HHcC-----------CCCEEEEcCCChhHH
Confidence 355666666654 77777754 3477788887765333 2221 556777787777544
Q ss_pred H----HHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCC
Q 048643 205 Q----KAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGI 280 (506)
Q Consensus 205 ~----ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~ 280 (506)
. +.+...|+ +++.++. .|++++++++++++ .+|++..+++++|.+.|+++|+++|+++|+
T Consensus 102 ~~~~~~~~~~~gi---~v~~vd~-------~d~e~l~~ai~~~t------~lV~lesP~Nptg~~~di~~I~~la~~~gi 165 (380)
T PRK06176 102 FRLFDKVLVKNGL---SCTIIDT-------SDLSQIKKAIKPNT------KALYLETPSNPLLKITDLAQCASVAKDHGL 165 (380)
T ss_pred HHHHHHHHHhcCe---EEEEcCC-------CCHHHHHHhcCcCc------eEEEEECCCCCCceecCHHHHHHHHHHcCC
Confidence 3 34455677 7777653 38999999887643 378889999999999999999999999999
Q ss_pred EEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCc--ceEEEEeCchhHHhhhcCCccccCCccccCCCcc
Q 048643 281 WVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLD--CCCLWVKDPSALVSSLSTNPEYLKNKATESKQVV 358 (506)
Q Consensus 281 ~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~ 358 (506)
+++||++|+......+ . + .++|.++.++||+++.|-+ .|++.++++.... .+. .+..
T Consensus 166 ~vivD~t~a~~~~~~p-~-----~-~gaDivv~S~tK~l~g~~d~~gG~vv~~~~~~~~-~~~----~~~~--------- 224 (380)
T PRK06176 166 LTIVDNTFATPYYQNP-L-----L-LGADIVVHSGTKYLGGHSDVVAGLVTTNNEALAQ-EIA----FFQN--------- 224 (380)
T ss_pred EEEEECCccccccCCc-c-----c-cCCCEEEecCceeccCCccceeeEEEecHHHHHH-HHH----HHHH---------
Confidence 9999999976543222 1 1 1799999999999998754 6666666554322 111 1100
Q ss_pred CCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc
Q 048643 359 DYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS 413 (506)
Q Consensus 359 ~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~ 413 (506)
..+....+...|..++ |.+.+..+++++.+++..+.+.|++.|.++
T Consensus 225 -------~~G~~~~~~~~~l~~~--gl~tl~~R~~~~~~~a~~la~~L~~~p~v~ 270 (380)
T PRK06176 225 -------AIGGVLGPQDSWLLQR--GIKTLGLRMEAHQKNALCVAEFLEKHPKVE 270 (380)
T ss_pred -------HhcCCCCHHHHHHHHh--ccCcHHHHHHHHHHHHHHHHHHHHhCCCee
Confidence 0111123344566655 667788889999999999999999887654
No 217
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.69 E-value=1.4e-14 Score=148.68 Aligned_cols=281 Identities=12% Similarity=0.028 Sum_probs=184.2
Q ss_pred HHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCCC
Q 048643 136 IVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGIDL 215 (506)
Q Consensus 136 ~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~ 215 (506)
++++.+++.+|++.+ ..++|+|+++++..++.+..+ ++..|+++...+..+...++..|+
T Consensus 90 ~lr~~ia~~~~~~~~-------~I~~t~Ga~~~i~~~~~~~~~-----------~gd~Vlv~~P~y~~y~~~~~~~g~-- 149 (380)
T PLN03026 90 RLRAALAEDSGLESE-------NILVGCGADELIDLLMRCVLD-----------PGDKIIDCPPTFGMYVFDAAVNGA-- 149 (380)
T ss_pred HHHHHHHHHhCcChh-------hEEEcCCHHHHHHHHHHHhcC-----------CCCEEEEcCCChHHHHHHHHHcCC--
Confidence 355667777787654 688999988888666554322 556788888888878888888999
Q ss_pred CCeEEEecCCCCCcccCHHHHHHHHH-HHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeeccccccccc
Q 048643 216 KNFRAIKTTKSSSYGLSPDSLLTQIN-LDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACI 294 (506)
Q Consensus 216 ~~v~~v~~~~~~~~~~d~~~L~~~i~-~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~~ 294 (506)
+++.+|.+. ++.+|+++|++++. +. +.+|+++.++|+||.+-|.+++.++++.. +|+++|.+|..+..
T Consensus 150 -~~~~v~~~~--~~~~d~~~l~~~~~~~~------~~~v~l~~P~NPTG~~~~~~~l~~l~~~~-~~vi~DeaY~~~~~- 218 (380)
T PLN03026 150 -EVIKVPRTP--DFSLDVPRIVEAVETHK------PKLLFLTSPNNPDGSIISDDDLLKILELP-ILVVLDEAYIEFST- 218 (380)
T ss_pred -EEEEeecCC--CCCcCHHHHHHHHhccC------CcEEEEeCCCCCCCCCCCHHHHHHHHhcC-CEEEEECcchhhcC-
Confidence 999999863 57899999999884 32 33788889999999999999999999865 99999999965431
Q ss_pred CccchhhhcCCCCCCeeEEcCccccC-CCCcceEEEEeCchhHHhhhc-CCccccCCccccCCCccCCCCccccCCCCCC
Q 048643 295 CPEFQHFIDGVEGADSFSLNAHKWFF-TTLDCCCLWVKDPSALVSSLS-TNPEYLKNKATESKQVVDYKDWQITLSRRFR 372 (506)
Q Consensus 295 ~~~~~~~~~gi~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~-~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~ 372 (506)
.......+... .-..+..++.|.++ .....|+++.. +..+ +.+. ...+|- ..
T Consensus 219 ~~~~~~~~~~~-~~viv~~SfSK~~glaGlRiGy~~~~-~~~i-~~l~~~~~~~~-----------------------~~ 272 (380)
T PLN03026 219 QESRMKWVKKY-DNLIVLRTFSKRAGLAGLRVGYGAFP-LSII-EYLWRAKQPYN-----------------------VS 272 (380)
T ss_pred CcchHHHHHhC-CCEEEEecchHhhcCccccceeeecC-HHHH-HHHHHhcCCCC-----------------------CC
Confidence 11111111110 12245677889997 44667877653 3332 2221 111110 11
Q ss_pred chHHHHHHHHhc-hhHHHHHHHHHHHHHHHHHHHHHcCCCCc--c---ceEEEeecCCCcccccccccchHHHHHHHHHH
Q 048643 373 SLKLWLVIRNYG-VANLRHFLRSHVNMAKLFERLVASDKRVS--P---SAVMDKLKPKYENCHSQQLVTEEEAINEFNRE 446 (506)
Q Consensus 373 al~~~~~l~~~G-~~g~~~~i~~~~~~a~~l~~~l~~~~~~~--p---~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (506)
.+...++...+. .+.+++..++..+..+++.+.|+++++++ | +.+.+++.+. ....+
T Consensus 273 ~~~q~aa~~aL~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~-----------------~~~~~ 335 (380)
T PLN03026 273 VAAEVAACAALSNPKYLEDVKNALVEERERLFGLLKEVPFLEPYPSDANFILCRVTSG-----------------RDAKK 335 (380)
T ss_pred HHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHCCCCeECCCCCeEEEEECCCC-----------------CCHHH
Confidence 222333344332 24466777777888899999999886554 4 5666665421 00245
Q ss_pred HHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHH
Q 048643 447 LLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQ 494 (506)
Q Consensus 447 l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~ 494 (506)
+.+.|.+.|+.........+..++|+++. +.+++++++++|+++
T Consensus 336 ~~~~l~~~gI~v~~~~~~~~~~~lRis~~----~~~~~~~l~~al~~~ 379 (380)
T PLN03026 336 LKEDLAKMGVMVRHYNSKELKGYIRVSVG----KPEHTDALMEALKQL 379 (380)
T ss_pred HHHHHHHCCeEEEECCCCCCCCEEEEecC----CHHHHHHHHHHHHHh
Confidence 67777777875433222234568999985 566899999998764
No 218
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.69 E-value=4.1e-15 Score=151.11 Aligned_cols=229 Identities=14% Similarity=0.128 Sum_probs=158.0
Q ss_pred ccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHH
Q 048643 125 ISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCAL 204 (506)
Q Consensus 125 ~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~ 204 (506)
...|...++|+. ++++.|.+ .+++++||++|+..++. +.. ++..|+++...+-..
T Consensus 51 ~~~p~~~~le~~----lA~leg~~---------~~v~~~sG~aAi~~~l~-~l~-----------~GD~VI~~~~~yg~~ 105 (364)
T PRK07269 51 TKNPTRAKLEET----LAAIESAD---------YALATSSGMSAIVLAFS-VFP-----------VGSKVVAVRDLYGGS 105 (364)
T ss_pred CCCccHHHHHHH----HHHHhCCC---------eEEEeCCHHHHHHHHHH-HhC-----------CCCEEEEecCCcCch
Confidence 456777888876 55555533 57889999998877663 222 445566665554332
Q ss_pred HHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEe
Q 048643 205 QKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHV 284 (506)
Q Consensus 205 ~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhV 284 (506)
........- +. .+.+ ++.+|+++++++|++.++ +|+++.++|++|.+-|+++|+++|+++|++++|
T Consensus 106 ~~~~~~~~~---~~-~~~~----~~~~d~~~l~~~i~~~Tk------lV~lesP~NPtg~~~di~~I~~la~~~gi~vvv 171 (364)
T PRK07269 106 FRWFNQQEK---EG-RFHF----TYANTEEELIAAIEEDTD------IVYIETPTNPLMVEFDIEKVAKLAHAKGAKVIV 171 (364)
T ss_pred HHHHHHHHh---cC-cEEE----EecCCHHHHHHhcCcCce------EEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEE
Confidence 222221100 00 1111 135689999999976544 899999999999999999999999999999999
Q ss_pred ecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCc--ceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCC
Q 048643 285 DAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLD--CCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKD 362 (506)
Q Consensus 285 DaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~ 362 (506)
|++|+......| .. .++|.++.+.||+++.+-+ .|++++++++...+... ...
T Consensus 172 D~t~~~~~~~~p-l~------~gaDivv~S~tK~l~g~~d~~gG~v~~~~~~l~~~~~~-----~~~------------- 226 (364)
T PRK07269 172 DNTFYSPIYQRP-IE------LGADIVLHSATKYLSGHNDVLAGVVVTNDLELYEKLFY-----NLN------------- 226 (364)
T ss_pred ECCCcccccCCc-hh------hCCcEEEecCceeccCCCcccceEEEeCcHHHHHHHHH-----HHH-------------
Confidence 999876543322 11 2799999999999998766 67777766654322211 000
Q ss_pred ccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc----c---ceEEEeec
Q 048643 363 WQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS----P---SAVMDKLK 422 (506)
Q Consensus 363 ~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~----p---~~v~f~~~ 422 (506)
..+....++..|..++. .+.+..+++++.+++.++.+.|+++|.++ | ++++|.+.
T Consensus 227 ---~~G~~~s~~~a~l~~~~--L~tL~~r~~~~~~na~~~a~~L~~~p~v~~v~ypg~gg~~sf~~~ 288 (364)
T PRK07269 227 ---TTGAVLSPFDSYLLMRG--LKTLSLRMERSTANAQEVVAFLKKSPAVKEVLYTGKGGMISFKVA 288 (364)
T ss_pred ---HhCCCCCHHHHHHHHcC--CCcHHHHHHHHHHHHHHHHHHHHhCCCccEEeCCCcCcEEEEEEC
Confidence 01122356777777774 46789999999999999999999999876 5 88999875
No 219
>PLN02452 phosphoserine transaminase
Probab=99.69 E-value=4.5e-15 Score=150.09 Aligned_cols=334 Identities=11% Similarity=0.014 Sum_probs=213.1
Q ss_pred CccccCCCCCC-HHHHHHHHHHhhcCCCC------cccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCch
Q 048643 94 NYFAYFPSSGS-IAGFLGEMLSSGFNVVG------FNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTC 166 (506)
Q Consensus 94 ~~~~~~~~~~~-~~~~~~~~l~~~~n~~~------~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt 166 (506)
+-+.|.|++.. ++.++..+....+|-.+ .....++.+.++-+++.+.|.++++.|+++ ...++++|||
T Consensus 7 ~~~~f~pGP~~lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~~f~~i~~~~~~~L~~l~~~p~~y-----~v~~l~Gsgt 81 (365)
T PLN02452 7 RVFNFSAGPATLPANVLAKAQAELYNWEGSGMSVMEMSHRGKEFLSIIQKAEADLRELLDIPDNY-----EVLFLQGGAS 81 (365)
T ss_pred ceEeeeCCCCCCCHHHHHHHHHHHhcccccCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCc-----eEEEEeCccH
Confidence 45677787665 45566666655544321 112356788899999999999999998664 2456668888
Q ss_pred HHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCch--HHHHHHHHhCCCCCCeEEEecCCCC-CcccCHHHHHHHHHHH
Q 048643 167 EAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHC--ALQKAAQIVGIDLKNFRAIKTTKSS-SYGLSPDSLLTQINLD 243 (506)
Q Consensus 167 ~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~--s~~ka~~~~G~g~~~v~~v~~~~~~-~~~~d~~~L~~~i~~~ 243 (506)
.+.-.++...... .+.+.++. ...+ .+.+.|+.+|. ..+.....+.+ ....+++.++ .+
T Consensus 82 ~~~ea~~~nl~~~----------~~~~l~~~-~G~fg~r~~~~a~~~g~---~~~~~~~~~~~~~~~~~~~~~~----~~ 143 (365)
T PLN02452 82 TQFAAIPLNLCKP----------GDKADFVV-TGSWSKKAAKEAKKYCK---TNVIASGKDEKYTKIPSVSEWE----LT 143 (365)
T ss_pred HHHHHHHHhcCCC----------CCeEEEEE-CCHHHHHHHHHHHHhCC---CcEEEecCCCCCCCCCChHHcC----CC
Confidence 7765554433221 23344443 3444 35566777776 34433222111 1135666542 11
Q ss_pred HhcCCccEEEEEeccCCCCCc-ccChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCC
Q 048643 244 VEAGLVPLFLCATIGTTAITA-VDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTT 322 (506)
Q Consensus 244 ~~~g~~p~~Vv~t~gtt~tG~-idpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p 322 (506)
..+.+|..++..|.+|. +.|++++.+ +.++||++...+....+-- ..+.+..++||.++ |
T Consensus 144 ----~~~~~v~~~hnETstGv~~~~~~~i~~------~~lvVDa~Ss~g~~pidv~--------~~~v~~~saqK~lG-P 204 (365)
T PLN02452 144 ----PDAKFVHICANETIHGVEFKDYPDVGN------VPLVADMSSNFLSKPVDVS--------KYGVIYAGAQKNVG-P 204 (365)
T ss_pred ----CCCcEEEECCCCCCCcEecCcccccCC------CeEEEECCccccCcccCHH--------HcCEEEEecccccC-C
Confidence 12458999999999999 699988863 7999999887776655422 22334469999996 9
Q ss_pred CcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCccccCCCC-CCchHHHHHHHHhchh-HHHHHHHHHHHHHH
Q 048643 323 LDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRR-FRSLKLWLVIRNYGVA-NLRHFLRSHVNMAK 400 (506)
Q Consensus 323 ~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~l~~~G~~-g~~~~i~~~~~~a~ 400 (506)
.|.|++++|++.. .+.-...+.|+.-.... ...+...+-+ +....+-.+|+.+-.+ |++.+.+++.++++
T Consensus 205 ~Gl~~v~vr~~~l-~~~~~~~~~~~~~~~~~-------~~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~ 276 (365)
T PLN02452 205 SGVTIVIIRKDLI-GNARPITPGMLDYKIHA-------ENDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKAD 276 (365)
T ss_pred CCeEEEEEcHHHH-hhcccCCCchhhHHHHH-------hcCCccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 9999999987653 22111122332211000 0001111211 1224556667777665 89999999999999
Q ss_pred HHHHHHHcCCCCc-----c-----ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEE
Q 048643 401 LFERLVASDKRVS-----P-----SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAM 470 (506)
Q Consensus 401 ~l~~~l~~~~~~~-----p-----~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~l 470 (506)
++++.|++.++|. | .+|+|++... .+.+++.+.+.++|.+.+.+...-|. +
T Consensus 277 ~l~~~l~~~~G~y~~~~~~~~rs~~~vsF~~~~~-----------------~~~~~f~~~~~~~g~~~~~G~r~~gg--~ 337 (365)
T PLN02452 277 LLYDAIDESNGFYVCPVEKSVRSLMNVPFTLGGS-----------------ELEAEFVKEAAKAGMVQLKGHRSVGG--M 337 (365)
T ss_pred HHHHHHHhCCCcccCCCChHHhCCeEEEEEcCCc-----------------hhHHHHHHHHHHCCCcccCCccccCc--e
Confidence 9999999987763 2 5789987543 25678889999999876655444343 9
Q ss_pred EEEecCCCCCHHHHHHHHHHHHHHHHH
Q 048643 471 RFAVGATLTEERHVMVAWTMVQEQLEA 497 (506)
Q Consensus 471 R~~~~~~~tt~edi~~li~~l~~~~~~ 497 (506)
|+++.| ..+.++|++|++.+++..++
T Consensus 338 R~s~yn-a~~~~~v~~L~~~m~~f~~~ 363 (365)
T PLN02452 338 RASIYN-AMPLAGVEKLVAFMKDFQAK 363 (365)
T ss_pred EEECcC-CCCHHHHHHHHHHHHHHHHh
Confidence 999975 56677999999999998754
No 220
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.69 E-value=2.7e-14 Score=147.72 Aligned_cols=289 Identities=15% Similarity=0.108 Sum_probs=180.9
Q ss_pred HHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCC
Q 048643 135 NIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGID 214 (506)
Q Consensus 135 ~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g 214 (506)
.++.+++++.+|.+.. ...++++||++|+..|+.+++.. | ++.+|.+....|-+...+....|..
T Consensus 88 ~~la~~l~~~~~~~~~------~~v~~~~sgsea~~~al~~~~~~-----g----~~~ii~~~~~yhg~~~~~~~~~~~~ 152 (398)
T PRK03244 88 IALAERLVELLGAPEG------GRVFFCNSGAEANEAAFKLARLT-----G----RTKIVAAEGGFHGRTMGALALTGQP 152 (398)
T ss_pred HHHHHHHHHhCCCCCC------CEEEEeCchHHHHHHHHHHHHHH-----C----CCeEEEECCCcCCccHHHHhccCCc
Confidence 4666888888885421 26899999999999999988763 1 2345555555665555555444421
Q ss_pred C---------CCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC----hhHHHHHHHHhCCE
Q 048643 215 L---------KNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP----LKPLCDVAKQFGIW 281 (506)
Q Consensus 215 ~---------~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp----l~~I~~ia~~~g~~ 281 (506)
. .++..+|. .|+++|++.+.+ .+.+|++....+++|.+-| +++|.++|++||++
T Consensus 153 ~~~~~~~~~~~~~~~~~~-------~d~~~l~~~~~~------~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~l 219 (398)
T PRK03244 153 AKRAPFEPLPGGVEHVPY-------GDVDALAAAVDD------DTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGAL 219 (398)
T ss_pred ccccCCCCCCCCceEeCC-------CCHHHHHHhhcC------CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCE
Confidence 0 12333332 378899988742 2446777777899999977 89999999999999
Q ss_pred EEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCC
Q 048643 282 VHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYK 361 (506)
Q Consensus 282 lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~ 361 (506)
+++|++|.++......+.....++ ..|.+++ .|+++..+..|+++.++. +.+.+... ...
T Consensus 220 lI~DEv~~g~gr~g~~~~~~~~~~-~pDi~t~--sK~l~~G~~ig~~~~~~~--~~~~~~~~---~~~------------ 279 (398)
T PRK03244 220 LVLDEVQTGIGRTGAWFAHQHDGV-TPDVVTL--AKGLGGGLPIGACLAFGP--AADLLTPG---LHG------------ 279 (398)
T ss_pred EEEeccccCCcccchHHhhhhhCC-CCCEEEE--chhhhCCcccEEEEEcHH--HHhhccCC---CCc------------
Confidence 999999976432111111111233 4676665 599997788999888754 22333210 000
Q ss_pred CccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcC--CCCc--c---ceEEEeecCCCccccccccc
Q 048643 362 DWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASD--KRVS--P---SAVMDKLKPKYENCHSQQLV 434 (506)
Q Consensus 362 ~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~--~~~~--p---~~v~f~~~~~~~~~~~~~~~ 434 (506)
.+. .+.+.....+..+|+.+..+ +..++..++.++|.+.|++. |.+. . .++.+.+...
T Consensus 280 -~t~-~~~~~~~aaa~a~l~~~~~~---~~~~~~~~~~~~l~~~L~~~~~~~~~~v~g~g~~~~i~~~~~---------- 344 (398)
T PRK03244 280 -STF-GGNPVACAAALAVLDTIASE---GLLENAERLGEQLRAGIEALGHPLVDHVRGRGLLLGIVLTAP---------- 344 (398)
T ss_pred -CCC-CCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHhcCCCceeeEeeccEEEEEEEecc----------
Confidence 011 11111223334444444333 34567777888999999875 2111 1 4455554321
Q ss_pred chHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 048643 435 TEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAFL 499 (506)
Q Consensus 435 ~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l~ 499 (506)
...++.+++.++|.. +.+. +..++|+++ +...+++||+++++.|+++.+++.
T Consensus 345 --------~~~~~~~~l~~~Gv~-~~~~---~~~~iR~~p-~~~~t~~~i~~~~~~l~~~l~~~~ 396 (398)
T PRK03244 345 --------VAKAVEAAAREAGFL-VNAV---APDVIRLAP-PLIITDAQVDAFVAALPAILDAAA 396 (398)
T ss_pred --------HHHHHHHHHHHCCeE-Eeec---CCCEEEEEC-CCcCCHHHHHHHHHHHHHHHHhcc
Confidence 235677888888874 4432 346899998 355678899999999999987654
No 221
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.69 E-value=7.8e-15 Score=147.79 Aligned_cols=268 Identities=14% Similarity=0.040 Sum_probs=171.4
Q ss_pred HHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCC
Q 048643 135 NIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGID 214 (506)
Q Consensus 135 ~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g 214 (506)
.++.+++++++|.+.+ ..++|+|+++++.. +..+.. ++ .|++...+|..+...++..|+
T Consensus 50 ~~lr~~la~~~~~~~~-------~i~~t~G~~~~i~~-~~~~l~-----------~g-~vl~~~p~y~~~~~~~~~~g~- 108 (330)
T TIGR01140 50 DELRAAAAAYYGLPAA-------SVLPVNGAQEAIYL-LPRLLA-----------PG-RVLVLAPTYSEYARAWRAAGH- 108 (330)
T ss_pred HHHHHHHHHHhCCChh-------hEEECCCHHHHHHH-HHHHhC-----------CC-eEEEeCCCcHHHHHHHHHcCC-
Confidence 3455677777887644 67888887766654 332221 34 466677889999999999999
Q ss_pred CCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC---hhHHHHHHHHhCCEEEeecccccc
Q 048643 215 LKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGS 291 (506)
Q Consensus 215 ~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp---l~~I~~ia~~~g~~lhVDaA~gg~ 291 (506)
+++.++ |++.|++++++ + .+|+++.++|++|.+-+ +++|+++|+++|+++++|.+|+.+
T Consensus 109 --~~~~~~---------d~~~l~~~~~~-~------~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~ 170 (330)
T TIGR01140 109 --EVVELP---------DLDRLPAALEE-L------DVLVLCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFIDF 170 (330)
T ss_pred --EEEEeC---------CHHHHHhhccc-C------CEEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECccccc
Confidence 888876 67888888732 2 26778889999999977 777888899999999999999765
Q ss_pred cccCccchhhhcCCCCCCeeEEcCccccCCC-CcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCccccCCCC
Q 048643 292 ACICPEFQHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRR 370 (506)
Q Consensus 292 ~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~ 370 (506)
.. .+....... ...-+.+..+++|+++.| ..+|+++.++. .+ ..+... .. .++
T Consensus 171 ~~-~~~~~~~~~-~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~-~~-~~l~~~---~~-------------~~~------ 224 (330)
T TIGR01140 171 TP-DASLAPQAA-RFPGLVVLRSLTKFFGLAGLRLGFVVAHPA-LL-ARLREA---LG-------------PWT------ 224 (330)
T ss_pred CC-ccchhhHhc-cCCCEEEEEecchhhcCchhhhhheeCCHH-HH-HHHHhc---CC-------------CCC------
Confidence 42 211111111 113456777999999855 66888887543 22 233211 00 000
Q ss_pred CCchHHHHHHHHhchh-HHHHHHHHHHHHHHHHHHHHHcCCCCc--c---ceEEEeecCCCcccccccccchHHHHHHHH
Q 048643 371 FRSLKLWLVIRNYGVA-NLRHFLRSHVNMAKLFERLVASDKRVS--P---SAVMDKLKPKYENCHSQQLVTEEEAINEFN 444 (506)
Q Consensus 371 ~~al~~~~~l~~~G~~-g~~~~i~~~~~~a~~l~~~l~~~~~~~--p---~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (506)
...+...++.+.+... ..+...++..++.+++.+.|++.+.++ | ..+.+... . .
T Consensus 225 ~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~f~~~~~~-~-------------------~ 284 (330)
T TIGR01140 225 VNGPARAAGRAALADTAWQAATRARLAAERARLAALLARLGGLEVVGGTALFLLVRTP-D-------------------A 284 (330)
T ss_pred chHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhCCCceECCCCCeEEEEEcC-C-------------------H
Confidence 1122333444444333 346667888889999999999986565 4 22222221 1 2
Q ss_pred HHHHHHHHhcCcEEEeeeeEC--CEEEEEEEecCCCCCHHHHHHHHHHH
Q 048643 445 RELLESINASGKAYMTHAVCG--GIYAMRFAVGATLTEERHVMVAWTMV 491 (506)
Q Consensus 445 ~~l~~~l~~~g~~~~~~~~~~--g~~~lR~~~~~~~tt~edi~~li~~l 491 (506)
.++.++|.+.|+.......+. +..++|++++. ..++ ++++++|
T Consensus 285 ~~l~~~l~~~gi~v~pg~~f~~~~~~~iRi~~~~---~~~~-~~~~~~l 329 (330)
T TIGR01140 285 AALHEALARRGILIRDFDNFPGLDPRYLRFALPT---DEEN-DRLEEAL 329 (330)
T ss_pred HHHHHHHHHCCEEEEECCCCCCCCCCEEEEEecC---HHHH-HHHHHhh
Confidence 467788888887555444432 34689999854 3345 8887765
No 222
>PRK08175 aminotransferase; Validated
Probab=99.68 E-value=7e-14 Score=144.42 Aligned_cols=314 Identities=14% Similarity=0.083 Sum_probs=192.3
Q ss_pred CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCC
Q 048643 121 GFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQT 200 (506)
Q Consensus 121 ~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~ 200 (506)
...|....+..++++.+.+|+.+.+|++.+. ....++|+|+++++...+.+..+ ++..|+++..+
T Consensus 60 ~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~----~~~i~~t~G~~~~l~~~~~~~~~-----------~gd~Vlv~~P~ 124 (395)
T PRK08175 60 THGYSTSRGIPRLRRAISRWYQDRYDVDIDP----ESEAIVTIGSKEGLAHLMLATLD-----------HGDTVLVPNPS 124 (395)
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC----CCcEEEccCcHHHHHHHHHHhCC-----------CCCEEEEcCCC
Confidence 3456555567899999999999888875321 01578888888777554433322 56678889999
Q ss_pred chHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccCh---hHHHHHHHH
Q 048643 201 HCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPL---KPLCDVAKQ 277 (506)
Q Consensus 201 H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl---~~I~~ia~~ 277 (506)
|......++.+|. +++.||++++ ..+.++|++++++. ...+.+|+++.++|+||.+-+. ++|+++|++
T Consensus 125 y~~~~~~~~~~g~---~~~~v~~~~~---~~~~~~l~~~l~~~---~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~ 195 (395)
T PRK08175 125 YPIHIYGAVIAGA---QVRSVPLVEG---VDFFNELERAIRES---YPKPKMMILGFPSNPTAQCVELEFFEKVVALAKR 195 (395)
T ss_pred CcchHHHHHHcCC---eEEEEecccC---CCcHHHHHHHHhhc---cCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 9888888889999 9999999753 34588898888642 1124477778889999998665 799999999
Q ss_pred hCCEEEeecccccccccCccchhhhcCCCC-CC--eeEEcCccccCCC-CcceEEEEeCchhHHhhhcCCccccCCcccc
Q 048643 278 FGIWVHVDAAYAGSACICPEFQHFIDGVEG-AD--SFSLNAHKWFFTT-LDCCCLWVKDPSALVSSLSTNPEYLKNKATE 353 (506)
Q Consensus 278 ~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~-aD--si~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~ 353 (506)
||+++++|.+|+.... .......+..+.. .| .++.++.|.++.| ..+|++.. ++... +.+.....+..
T Consensus 196 ~~i~ii~De~y~~l~~-~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~~~~-~~~l~-~~~~~~~~~~~----- 267 (395)
T PRK08175 196 YDVLVVHDLAYADIVY-DGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMVG-NPELV-SALARIKSYHD----- 267 (395)
T ss_pred cCcEEEEecchHhhcc-CCCCCcchhcCCCcccCEEEEeeccccccCcchhheeeeC-CHHHH-HHHHHHHhhcc-----
Confidence 9999999999975432 1111011111111 23 3457789999755 55777654 44332 23321111110
Q ss_pred CCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c---ceEEEeecCCCcc
Q 048643 354 SKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS---P---SAVMDKLKPKYEN 427 (506)
Q Consensus 354 ~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p---~~v~f~~~~~~~~ 427 (506)
++ .+ ......+...+.. +...++++.++..+..+++.+.|++. ++. | ..+++++.+.-
T Consensus 268 ---------~~--~~-~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~p~~g~~i~i~l~~~~-- 331 (395)
T PRK08175 268 ---------YG--TF-TPLQVAAIAALEG-DQQCVRDIAEQYKRRRDVLVKGLHEA-GWMVEMPKASMYVWAKIPEPY-- 331 (395)
T ss_pred ---------cC--CC-cHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHc-CCcccCCCEEEEEEEECCccc--
Confidence 00 00 0011111222221 23446666777778888999999887 566 4 45555554320
Q ss_pred cccccccchHHHHHHHHHHHHHHHH-hcCcEEEeeeeE--CCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 048643 428 CHSQQLVTEEEAINEFNRELLESIN-ASGKAYMTHAVC--GGIYAMRFAVGATLTEERHVMVAWTMVQEQLEA 497 (506)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~--~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~ 497 (506)
.. ....++.+.+. +.|+....+..+ .+..++|+++. .+++.+.+.++.|.++.++
T Consensus 332 --------~~----~~~~~~~~~l~~~~gv~v~p~~~f~~~~~~~lRis~~---~~~~~~~~al~~l~~~l~~ 389 (395)
T PRK08175 332 --------AA----MGSLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFALI---ENRDRIRQAIRGIKAMFRA 389 (395)
T ss_pred --------CC----CCHHHHHHHHHHhCCEEEeCchhhCcCCCCeEEEEeC---CCHHHHHHHHHHHHHHHHh
Confidence 00 00245555554 456644333222 23468999985 3567888888887777654
No 223
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.68 E-value=6.1e-14 Score=145.20 Aligned_cols=291 Identities=12% Similarity=0.077 Sum_probs=173.2
Q ss_pred HHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCC-
Q 048643 136 IVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGID- 214 (506)
Q Consensus 136 ~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g- 214 (506)
++.+.++++.|.+ ..+++++||+||..||.++|.......|....+..+|.++...|-+..-+....+-.
T Consensus 87 ~l~~~l~~~~~~~---------~~~~~~SGs~A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~ 157 (401)
T PRK00854 87 PLYEELAALTGSH---------KVLPMNSGAEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPD 157 (401)
T ss_pred HHHHHHHhhCCCC---------EEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCcc
Confidence 3445566777653 568999999999999999987532211111002345666666676654433221100
Q ss_pred --------CCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC----hhHHHHHHHHhCCEE
Q 048643 215 --------LKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP----LKPLCDVAKQFGIWV 282 (506)
Q Consensus 215 --------~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp----l~~I~~ia~~~g~~l 282 (506)
..+++.+| ..|++.|+++|.+. +.+|++..+.+++|.+-| +++|+++|++||+++
T Consensus 158 ~~~~~~~~~~~~~~~~-------~~d~~~le~~i~~~------~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~l 224 (401)
T PRK00854 158 ARGGFGPFTPGFRVVP-------FGDAEALEAAITPN------TVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTL 224 (401)
T ss_pred ccccCCCCCCCeEEeC-------CCCHHHHHHHhCCC------eEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEE
Confidence 01233443 24889999988643 347889999999999976 999999999999999
Q ss_pred EeecccccccccCcc-chhhhcCCCCCCeeEEcCccccCCCC-cceEEEEeCchhHHhhhcCCccccCCccccCCCccCC
Q 048643 283 HVDAAYAGSACICPE-FQHFIDGVEGADSFSLNAHKWFFTTL-DCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDY 360 (506)
Q Consensus 283 hVDaA~gg~~~~~~~-~~~~~~gi~~aDsi~~~~hK~l~~p~-~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~ 360 (506)
++|++|.|... ... +.....++ ..|.++++ |++...+ ..|+++.++. .. ..+.. ....
T Consensus 225 I~DEv~~g~g~-~g~~~~~~~~g~-~~D~~~~~--K~l~gg~~~ig~v~~~~~-~~-~~l~~----~~~~---------- 284 (401)
T PRK00854 225 ILDEIQTGLGR-TGKLLAEEHEGI-EADVTLIG--KALSGGFYPVSAVLSNSE-VL-GVLKP----GQHG---------- 284 (401)
T ss_pred EEechhhCCCC-CchHhHHhhcCC-CCCEEEec--ccccCCccCeEEEEEcHH-HH-hcccC----CCCC----------
Confidence 99999975322 211 11112233 46777764 9997653 5777776543 22 22211 0000
Q ss_pred CCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCC--c---c--ceEEEeecCCCcccccccc
Q 048643 361 KDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRV--S---P--SAVMDKLKPKYENCHSQQL 433 (506)
Q Consensus 361 ~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~--~---p--~~v~f~~~~~~~~~~~~~~ 433 (506)
.+. ++ ..+..++++..+..-.-.++.++..++++++.+.|++.... . + .++.|.+.+.
T Consensus 285 --~t~-~~---~~~~~aa~~a~L~~l~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~g~~~~i~~~~~--------- 349 (401)
T PRK00854 285 --STF-GG---NPLACAVARAALKVLTEEGMIENAAEMGAYFLEGLRSIRSNIVREVRGRGLMLAVELEPE--------- 349 (401)
T ss_pred --CCC-Cc---CHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhhccCceEEEeccceEEEEEEecC---------
Confidence 011 11 22333333333311011235677788889999999876321 1 2 4455544332
Q ss_pred cchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 048643 434 VTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQL 495 (506)
Q Consensus 434 ~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~ 495 (506)
.....++.+.|.+.|+. +.+ .+..++|+++ +...++++|+++++.|+++.
T Consensus 350 -------~~~~~~~~~~L~~~GV~-v~~---~~~~~lR~~p-~~~~t~e~i~~~i~~l~~~l 399 (401)
T PRK00854 350 -------AGGARQYCEALKERGLL-AKD---THDHTIRLAP-PLVITREQVDWALEQIAKVL 399 (401)
T ss_pred -------chhHHHHHHHHHHCCeE-Eec---CCCCEEEEeC-CcccCHHHHHHHHHHHHHHh
Confidence 11234677777788864 332 2346899998 45568889999999998764
No 224
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.68 E-value=2.8e-14 Score=148.35 Aligned_cols=254 Identities=10% Similarity=0.044 Sum_probs=160.6
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHH
Q 048643 126 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQ 205 (506)
Q Consensus 126 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 205 (506)
.++...++|++ +++++|.+ ..++++|||+|++.++.++...+..+.+. .++..|+++..+|.+..
T Consensus 61 ~G~~~~~fe~~----lA~~~g~~---------~~v~~~sGt~al~~aL~al~~~~~~~~~~--~pGd~VIv~~~t~~a~~ 125 (438)
T PRK15407 61 TGRFNDAFEKK----LAEFLGVR---------YALLVNSGSSANLLAFSALTSPKLGDRAL--KPGDEVITVAAGFPTTV 125 (438)
T ss_pred CChhHHHHHHH----HHHHhCCC---------eEEEECCHHHHHHHHHHHHhhccccccCC--CCCCEEEECCCCcHHHH
Confidence 35666777765 55666654 46889999999998887764322111111 15678899999999999
Q ss_pred HHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEee
Q 048643 206 KAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVD 285 (506)
Q Consensus 206 ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVD 285 (506)
.++...|. +++.++++.. ++.+|+++|++++.+.++ +|+++. .+|...++++|.++|++||+++++|
T Consensus 126 ~~v~~~G~---~pv~vdvd~~-~~~id~~~le~~i~~~tk------aVi~~~---~~G~p~dl~~I~~la~~~gi~vIeD 192 (438)
T PRK15407 126 NPIIQNGL---VPVFVDVELP-TYNIDASLLEAAVSPKTK------AIMIAH---TLGNPFDLAAVKAFCDKHNLWLIED 192 (438)
T ss_pred HHHHHcCC---EEEEEecCCC-cCCcCHHHHHHHcCcCCe------EEEEeC---CCCChhhHHHHHHHHHHCCCEEEEE
Confidence 99999999 8999998753 579999999999875433 566654 3677789999999999999999999
Q ss_pred cccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhh--cCCc-c---------ccCCcccc
Q 048643 286 AAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSL--STNP-E---------YLKNKATE 353 (506)
Q Consensus 286 aA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~--~~~~-~---------yl~~~~~~ 353 (506)
+||+.+....... +-.+..+-.+++.+.|.+.+.- .|+++++++....... .... . +.......
T Consensus 193 aa~a~G~~~~g~~---~G~~gd~~~fSf~~~k~~~~ge-GG~l~t~d~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~ 268 (438)
T PRK15407 193 NCDALGSTYDGRM---TGTFGDIATLSFYPAHHITMGE-GGAVFTNDPLLKKIIESFRDWGRDCWCAPGCDNTCGKRFGW 268 (438)
T ss_pred CccchhhhcCCee---eeccCceEEEeCCCCCCccccC-ceEEEECCHHHHHHHHHHHHhCccccccccccccccccccc
Confidence 9997766543221 1112233344455556665433 4888888775532211 1100 0 00000000
Q ss_pred CCC--ccCCC-Cc-cccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCC
Q 048643 354 SKQ--VVDYK-DW-QITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKR 411 (506)
Q Consensus 354 ~~~--~~~~~-~~-~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~ 411 (506)
..+ ...+. .+ ....+-+++--.+.+++-....+.+.+++++..++++++.+.|...++
T Consensus 269 ~~~~~~~~~~~~~~~~~~G~n~rmsel~AAig~~qL~~l~~~~~~R~~~a~~y~~~L~~~~~ 330 (438)
T PRK15407 269 QLGELPFGYDHKYTYSHLGYNLKITDMQAAIGLAQLEKLPGFIEARKANFAYLKEGLASLED 330 (438)
T ss_pred ccccccccccccccccccccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC
Confidence 000 00000 00 001233334444555655556688899999999999999999988764
No 225
>PLN02242 methionine gamma-lyase
Probab=99.68 E-value=2.1e-14 Score=148.44 Aligned_cols=217 Identities=14% Similarity=0.110 Sum_probs=148.4
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHH
Q 048643 126 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQ 205 (506)
Q Consensus 126 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 205 (506)
..|...++|+ .+++++|.+ ..++++||++|+..++.+... ++..|+++...+....
T Consensus 74 ~~Pt~~~LE~----~lA~l~g~~---------~~l~~~sG~~Ai~~al~al~~-----------~GD~Vl~~~~~Y~~~~ 129 (418)
T PLN02242 74 FNPTVLNLGR----QMAALEGTE---------AAYCTASGMSAISSVLLQLCS-----------SGGHVVASNTLYGGTH 129 (418)
T ss_pred CChhHHHHHH----HHHHHhCCC---------eEEEEccHHHHHHHHHHHHhC-----------CCCEEEEcCCcHHHHH
Confidence 4566666765 477777775 357899999999888776543 5667788888776655
Q ss_pred HHH-----HHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCC
Q 048643 206 KAA-----QIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGI 280 (506)
Q Consensus 206 ka~-----~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~ 280 (506)
..+ +..|+ +++.++. .|+++|+++|++. ++.+|+++.++|++|.+.|+++|+++|++||+
T Consensus 130 ~~~~~~~~~~~G~---~~~~~d~-------~d~e~l~~~i~~~-----~tklV~lesp~NPtG~v~dl~~I~~la~~~gi 194 (418)
T PLN02242 130 ALLAHFLPRKCNI---TTTFVDI-------TDLEAVKKAVVPG-----KTKVLYFESISNPTLTVADIPELARIAHEKGV 194 (418)
T ss_pred HHHHHhhhhccCc---eEEEcCC-------CCHHHHHHhcCcC-----CCEEEEEecCCCCCCcccCHHHHHHHHHHhCC
Confidence 544 34566 6665543 3899999988652 13488899999999999999999999999999
Q ss_pred EEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCc--ceEEEEeCchhHHhhhcCCccccCCccccCCCcc
Q 048643 281 WVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLD--CCCLWVKDPSALVSSLSTNPEYLKNKATESKQVV 358 (506)
Q Consensus 281 ~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~ 358 (506)
+++||.+|+.+ ...+ .. + ++|.+..+++|+++.+.. +|+++. +++.............
T Consensus 195 ~livDea~~~~-~~~~--~~----~-g~divv~S~SK~l~g~g~~~gG~iv~-~~~li~~l~~~~~~~~----------- 254 (418)
T PLN02242 195 TVVVDNTFAPM-VLSP--AR----L-GADVVVHSISKFISGGADIIAGAVCG-PAELVNSMMDLHHGAL----------- 254 (418)
T ss_pred EEEEECCCCcc-CCCH--HH----c-CCcEEEEeCccccCCCCCceEEEEEc-CHHHHHHHHHHhhhhh-----------
Confidence 99999999643 2221 11 1 589999999999987754 355553 3433322111110000
Q ss_pred CCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcC
Q 048643 359 DYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASD 409 (506)
Q Consensus 359 ~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~ 409 (506)
. ..+....+..+|..++ +...+..++++..++++++.+.|+++
T Consensus 255 -----~-~~g~~~~~~~A~l~~~--~l~tl~~r~~~~~~~a~~la~~L~~~ 297 (418)
T PLN02242 255 -----M-LLGPTMNPKVAFELSE--RLPHLSLRMKEHCRRAMEYAKRMKEL 297 (418)
T ss_pred -----h-ccCCCCCHHHHHHHHc--CCCcHHHHHHHHHHHHHHHHHHHHhC
Confidence 0 0111223445555554 55677788899999999999999987
No 226
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.68 E-value=9.1e-15 Score=149.15 Aligned_cols=226 Identities=18% Similarity=0.213 Sum_probs=156.5
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHH-
Q 048643 126 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCAL- 204 (506)
Q Consensus 126 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~- 204 (506)
..|...++|+ .++++.|.+. .++++||++|+..++ .... ++..|+++...+.+.
T Consensus 50 ~~pt~~~le~----~la~l~g~~~---------~~~~~sG~~ai~~~~-~ll~-----------~Gd~Vl~~~~~y~~t~ 104 (366)
T PRK08247 50 GNPTRGVLEQ----AIADLEGGDQ---------GFACSSGMAAIQLVM-SLFR-----------SGDELIVSSDLYGGTY 104 (366)
T ss_pred CCchHHHHHH----HHHHHhCCCc---------EEEEcCHHHHHHHHH-HHhC-----------CCCEEEEecCCcCcHH
Confidence 4455566664 5788888753 478888887776443 2211 445677777766543
Q ss_pred ---HHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCE
Q 048643 205 ---QKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIW 281 (506)
Q Consensus 205 ---~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~ 281 (506)
.+.+...|+ +++.++. .|++.|++++++.+ .+|+++.++|++|.+.++++|+++|++||++
T Consensus 105 ~~~~~~~~~~G~---~v~~vd~-------~d~~~l~~~i~~~t------klv~le~P~NP~~~~~dl~~I~~la~~~g~~ 168 (366)
T PRK08247 105 RLFEEHWKKWNV---RFVYVNT-------ASLKAIEQAITPNT------KAIFIETPTNPLMQETDIAAIAKIAKKHGLL 168 (366)
T ss_pred HHHHHHhhccCc---eEEEECC-------CCHHHHHHhcccCc------eEEEEECCCCCCCcHHHHHHHHHHHHHcCCE
Confidence 345556788 8888764 38899999987643 3888899999999999999999999999999
Q ss_pred EEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCc--ceEEEEeCchhHHhhhcCCccccCCccccCCCccC
Q 048643 282 VHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLD--CCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVD 359 (506)
Q Consensus 282 lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 359 (506)
+++|.+|+..+...+ .. .++|.+..+++|+++.+.+ .|++..++.... ..+.....+.
T Consensus 169 lIvD~t~~~~~~~~p-~~------~g~di~i~S~sK~~~g~~d~~~G~iv~~~~~l~-~~~~~~~~~~------------ 228 (366)
T PRK08247 169 LIVDNTFYTPVLQRP-LE------EGADIVIHSATKYLGGHNDVLAGLVVAKGQELC-ERLAYYQNAA------------ 228 (366)
T ss_pred EEEECCCccccccCc-hh------cCCcEEEeecceeccCCCceeeeEEecChHHHH-HHHHHHHHhc------------
Confidence 999999976554332 11 2689999999999987644 566655544332 2221100010
Q ss_pred CCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc----c---ceEEEeec
Q 048643 360 YKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS----P---SAVMDKLK 422 (506)
Q Consensus 360 ~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~----p---~~v~f~~~ 422 (506)
+.....+..|..++ |.+.+..++++..++++.+.+.|+++|++. | ++++|.+.
T Consensus 229 --------g~~~s~~~a~l~~~--~l~tl~~r~~~~~~~a~~l~~~L~~~p~v~~v~~P~~gg~~sf~~~ 288 (366)
T PRK08247 229 --------GAVLSPFDSWLLIR--GMKTLALRMRQHEENAKAIAAFLNEQPGVTDVLYPGRGGMLSFRLQ 288 (366)
T ss_pred --------CCCCChHHHHHHHh--ccCcHHHHHHHHHHHHHHHHHHHHhCCCeeEEecCCcCcEEEEEEC
Confidence 01122345566666 445777888899999999999999998876 4 88888764
No 227
>PRK09105 putative aminotransferase; Provisional
Probab=99.68 E-value=5.3e-14 Score=143.86 Aligned_cols=276 Identities=12% Similarity=0.049 Sum_probs=181.8
Q ss_pred HHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCCCC
Q 048643 137 VMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGIDLK 216 (506)
Q Consensus 137 ~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~ 216 (506)
+.+.+++.+|++.+ ..++|+|+++++..++.+..+ ++..|++++.+|..+...++..|.
T Consensus 83 Lr~aia~~~~v~~e-------~I~it~Gs~~ai~~~~~~l~~-----------~gd~Vli~~P~y~~~~~~~~~~g~--- 141 (370)
T PRK09105 83 LRTLFAAQEGLPAD-------HVMAYAGSSEPLNYAVLAFTS-----------PTAGLVTADPTYEAGWRAADAQGA--- 141 (370)
T ss_pred HHHHHHHHhCcChh-------hEEEcCChHHHHHHHHHHHcC-----------CCCEEEEeCCChHHHHHHHHHcCC---
Confidence 34456777788765 789999999988776665432 556788888999999999999999
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHH--hCCEEEeeccccccccc
Q 048643 217 NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQ--FGIWVHVDAAYAGSACI 294 (506)
Q Consensus 217 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~--~g~~lhVDaA~gg~~~~ 294 (506)
+++.+|.+. ++.+|++.|++.. +. +.+|+++.++|+||.+-+.++|.++++. +++|+++|++|..+. .
T Consensus 142 ~~~~v~~~~--~~~~d~~~l~~~~-~~------~~~v~l~nP~NPTG~~~~~~~l~~l~~~~~~~~~lIvDEaY~~f~-~ 211 (370)
T PRK09105 142 PVAKVPLRA--DGAHDVKAMLAAD-PN------AGLIYICNPNNPTGTVTPRADIEWLLANKPAGSVLLVDEAYIHFS-D 211 (370)
T ss_pred eEEEecCCC--CCCCCHHHHHhcC-CC------CCEEEEeCCCCCCCcCcCHHHHHHHHHhCCCCcEEEEECchHHhc-c
Confidence 999999874 5789999998752 21 2367888999999999998888888764 489999999995432 1
Q ss_pred CccchhhhcCCCCCCeeEE-cCccccC-CCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCccccCCCCCC
Q 048643 295 CPEFQHFIDGVEGADSFSL-NAHKWFF-TTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFR 372 (506)
Q Consensus 295 ~~~~~~~~~gi~~aDsi~~-~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~ 372 (506)
.+....... ...+.+++ ++.|.++ ..+.+|+++.. +..+ +.+... .+. . ..
T Consensus 212 ~~s~~~~~~--~~~~vi~~~SfSK~~g~~GlRiG~~v~~-~~~i-~~l~~~-~~~----------------~------~~ 264 (370)
T PRK09105 212 APSVVDLVA--QRKDLIVLRTFSKLYGMAGMRLGLAAAR-PDLL-AKLARF-GHN----------------P------LP 264 (370)
T ss_pred CcchHHHHh--hCCCEEEEecccHhhcCCccceeeeecC-HHHH-HHHHhc-CCC----------------C------cC
Confidence 111111111 13455655 5778886 44668888764 3332 222211 000 0 11
Q ss_pred chHHHHHHHHhc-hhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c--ceEEEeecCCCcccccccccchHHHHHHHHHH
Q 048643 373 SLKLWLVIRNYG-VANLRHFLRSHVNMAKLFERLVASDKRVS---P--SAVMDKLKPKYENCHSQQLVTEEEAINEFNRE 446 (506)
Q Consensus 373 al~~~~~l~~~G-~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p--~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (506)
....+++...+. .+.+++..++..++.+++.+.|++. +++ | +.+.+++... ..+
T Consensus 265 ~~~~~aa~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~~~~~~f~~~~~~~~-------------------~~~ 324 (370)
T PRK09105 265 VPAAAAGLASLRDPKLVPQRRAENAAVREDTIAWLKKK-GYKCTPSQANCFMVDVKRP-------------------AKA 324 (370)
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHC-CCCcCCCCCcEEEEeCCCC-------------------HHH
Confidence 122334444443 3456667778888899999999886 676 3 5444443211 246
Q ss_pred HHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 048643 447 LLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQL 495 (506)
Q Consensus 447 l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~ 495 (506)
+.+.|.++|+. +.........++|+++. +++++++++++|+++.
T Consensus 325 l~~~L~~~gI~-v~~~~~~~~~~~Ris~~----~~~~~~~l~~al~~~~ 368 (370)
T PRK09105 325 VADAMAKQGVF-IGRSWPIWPNWVRVTVG----SEEEMAAFRSAFAKVM 368 (370)
T ss_pred HHHHHHHCCcE-EecCCCCCCCeEEEEcC----CHHHHHHHHHHHHHHh
Confidence 67777777764 43221123578999985 4678999999998764
No 228
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.68 E-value=3.2e-14 Score=145.58 Aligned_cols=290 Identities=11% Similarity=0.043 Sum_probs=185.0
Q ss_pred hHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHH
Q 048643 130 ATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQ 209 (506)
Q Consensus 130 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~ 209 (506)
...+++. +++.++++.+ ..++|+|+++++..++.+..+ ++..|++...+|+.+...++
T Consensus 69 ~~~Lr~~----ia~~~~~~~~-------~I~it~G~~~~l~~~~~~~~~-----------~gd~vlv~~p~y~~~~~~~~ 126 (369)
T PRK08153 69 NHDLRHA----LAAHHGVAPE-------NIMVGEGIDGLLGLIVRLYVE-----------PGDPVVTSLGAYPTFNYHVA 126 (369)
T ss_pred cHHHHHH----HHHHhCCCHH-------HEEEcCCHHHHHHHHHHHhcC-----------CCCEEEECCCcchHHHHHHH
Confidence 3455555 4555577654 688888887766554443322 56778889999999998888
Q ss_pred HhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHh--CCEEEeecc
Q 048643 210 IVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQF--GIWVHVDAA 287 (506)
Q Consensus 210 ~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~--g~~lhVDaA 287 (506)
.+|. +++.+|.+. + .+|+++|++++.... +.+|+.+.++|+||.+-+.+++.++++.+ ++|+++|.+
T Consensus 127 ~~g~---~~~~vp~~~--~-~~~~~~l~~~~~~~~-----~~~i~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~lI~DE~ 195 (369)
T PRK08153 127 GFGG---RLVTVPYRD--D-REDLDALLDAARREN-----APLVYLANPDNPMGSWHPAADIVAFIEALPETTLLVLDEA 195 (369)
T ss_pred HcCC---eEEEeeCCC--C-CCCHHHHHHHhcccC-----CcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCc
Confidence 8999 999999864 2 589998887765321 23677788999999999988888877654 899999999
Q ss_pred cccccccCccchhhhcCCCCCCeeEEcCccccCC-CCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCcccc
Q 048643 288 YAGSACICPEFQHFIDGVEGADSFSLNAHKWFFT-TLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQIT 366 (506)
Q Consensus 288 ~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~-p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~ 366 (506)
|+.+.. ...... +.....--.+..++.|.++. ...+|+++.. ++. .+.+.....+. +
T Consensus 196 y~~~~~-~~~~~~-~~~~~~~~i~~~SfSK~~g~~GlRiG~~v~~-~~~-~~~l~~~~~~~----------------~-- 253 (369)
T PRK08153 196 YCETAP-AGAAPP-IDTDDPNVIRMRTFSKAYGLAGARVGYAIGA-PGT-IKAFDKVRNHF----------------G-- 253 (369)
T ss_pred hhhhcC-cccchh-hhhcCCCEEEEecchHhccCcchheeeeecC-HHH-HHHHHHhhcCC----------------C--
Confidence 975432 111111 11111112445568899974 4567887764 332 22332111010 0
Q ss_pred CCCCCCchHHHHHHHHhc-hhHHHHHHHHHHHHHHHHHHHHHcCCCCc--c---ceEEEeecCCCcccccccccchHHHH
Q 048643 367 LSRRFRSLKLWLVIRNYG-VANLRHFLRSHVNMAKLFERLVASDKRVS--P---SAVMDKLKPKYENCHSQQLVTEEEAI 440 (506)
Q Consensus 367 ~sr~~~al~~~~~l~~~G-~~g~~~~i~~~~~~a~~l~~~l~~~~~~~--p---~~v~f~~~~~~~~~~~~~~~~~~~~~ 440 (506)
...+..+++...+. .+.++++.+...+..+++.+.|++. ++. | +.+.+.....
T Consensus 254 ----~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~L~~~-g~~~~p~~~~f~~~~~~~~---------------- 312 (369)
T PRK08153 254 ----MNRIAQAAALAALKDQAYLAEVVGKIAAARDRIAAIARAN-GLTPLPSATNFVAIDCGRD---------------- 312 (369)
T ss_pred ----CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCccCCCcCcEEEEECCCC----------------
Confidence 12233334444442 3446667777778888888888876 565 5 4444443221
Q ss_pred HHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 048643 441 NEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAFL 499 (506)
Q Consensus 441 ~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l~ 499 (506)
.....++.+++.+.|+.+..+....+..++|+++. +++++++++++|+++.+.+.
T Consensus 313 ~~~a~~l~~~l~~~Gi~v~~p~~~~~~~~iRis~~----~~~~~~~~~~al~~~~~~~~ 367 (369)
T PRK08153 313 GAFARAVLDGLIARDIFVRMPGVAPLDRCIRVSCG----PDEELDLFAEALPEALEAAR 367 (369)
T ss_pred cccHHHHHHHHHHCCeEEeeCCCCCCCCeEEEecC----CHHHHHHHHHHHHHHHHHhh
Confidence 12346778888888875423433334569999985 57799999999999877654
No 229
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.67 E-value=1.5e-14 Score=147.50 Aligned_cols=217 Identities=12% Similarity=0.127 Sum_probs=151.9
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHH
Q 048643 126 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQ 205 (506)
Q Consensus 126 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 205 (506)
..|....+| +.++.+-|-+ ..+++++|+.|+..++.+... ++..|+++...+.+..
T Consensus 62 gnPt~~~Le----~~la~le~~~---------~~v~~sSG~aAi~~~l~all~-----------~GD~Vlv~~~~Y~~~~ 117 (395)
T PRK05967 62 GTPTTDALC----KAIDALEGSA---------GTILVPSGLAAVTVPFLGFLS-----------PGDHALIVDSVYYPTR 117 (395)
T ss_pred CChHHHHHH----HHHHHHhCCC---------CEEEECcHHHHHHHHHHHhcC-----------CCCEEEEccCCcHHHH
Confidence 445444555 5566665532 457777788888777655432 6678888888887766
Q ss_pred H----HHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCE
Q 048643 206 K----AAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIW 281 (506)
Q Consensus 206 k----a~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~ 281 (506)
. .++..|+ +++.++.+ +.+.+++++++.++ +|+++.++|+++.+.||++|+++|+++|++
T Consensus 118 ~l~~~~l~~~Gi---~v~~vd~~-------~~e~l~~al~~~Tk------lV~lesPsNP~l~v~dl~~I~~la~~~g~~ 181 (395)
T PRK05967 118 HFCDTMLKRLGV---EVEYYDPE-------IGAGIAKLMRPNTK------VVHTEAPGSNTFEMQDIPAIAEAAHRHGAI 181 (395)
T ss_pred HHHHHHHHhcCe---EEEEeCCC-------CHHHHHHhcCcCce------EEEEECCCCCCCcHHHHHHHHHHHHHhCCE
Confidence 4 4567788 88888542 34678888876543 899999999999999999999999999999
Q ss_pred EEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCc--ceEEEEeCchhHHhhhcCCccccCCccccCCCccC
Q 048643 282 VHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLD--CCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVD 359 (506)
Q Consensus 282 lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 359 (506)
++||++|+.....-| ..+ ++|.+..+..|+++..-+ .|++ +.++.... .+.. +..
T Consensus 182 vvVD~t~a~p~~~~p-l~~------GaDivv~S~tKy~~Gh~d~~~G~v-~~~~~~~~-~l~~---~~~----------- 238 (395)
T PRK05967 182 VMMDNTWATPLYFRP-LDF------GVDISIHAATKYPSGHSDILLGTV-SANEKCWP-QLLE---AHG----------- 238 (395)
T ss_pred EEEECCccCceecCh-hHc------CCCEEEEecccccCCCCCeeEEEE-EcCHHHHH-HHHH---HHH-----------
Confidence 999999987544322 221 899999999999764322 4544 44433211 1110 000
Q ss_pred CCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc
Q 048643 360 YKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS 413 (506)
Q Consensus 360 ~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~ 413 (506)
..+-...+..+|..++ |.+-+.-+++++.++|..+++.|+++|.++
T Consensus 239 ------~~G~~~~p~da~l~~r--gl~Tl~lR~~~~~~na~~lA~~L~~hp~v~ 284 (395)
T PRK05967 239 ------TLGLCAGPDDTYQILR--GLRTMGIRLEHHRKSALEIARWLEGRPDVA 284 (395)
T ss_pred ------HcCCCCCHHHHHHHHc--CcccHHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 0112234566777776 678889999999999999999999988765
No 230
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.67 E-value=3.5e-14 Score=137.30 Aligned_cols=294 Identities=15% Similarity=0.154 Sum_probs=202.3
Q ss_pred hhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHH
Q 048643 128 PAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKA 207 (506)
Q Consensus 128 p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka 207 (506)
.....+|++ |++|.+-+.. ++.++.--||-..|.+.-.. +|+.+||..+..|.|....
T Consensus 216 ~~hv~LE~e----LA~LHqK~aA---------LlFsSCfVANDstLftLak~---------lpgcei~SD~gNHASMI~G 273 (570)
T KOG1360|consen 216 KHHVRLEAE----LADLHQKEAA---------LLFSSCFVANDSTLFTLAKK---------LPGCEIFSDEGNHASMIQG 273 (570)
T ss_pred chhhhHHHH----HHHHhcCcce---------eeeeeeeeccchHHHHHHHH---------CCCcEEeccccchHHHHHH
Confidence 344556654 7888776543 44444444554444443222 2888899888899999999
Q ss_pred HHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecc
Q 048643 208 AQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAA 287 (506)
Q Consensus 208 ~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA 287 (506)
.+-.++ .-.... +.|+++|++.|+... ...|.+|.+....++.|+|.||+||++++++||+...+|..
T Consensus 274 Irns~v---~K~IFr-------HND~~hL~~lL~~~~--~svPKivAFEtVhSM~GavcpleelcDvah~yGAiTFlDEV 341 (570)
T KOG1360|consen 274 IRNSRV---PKHIFR-------HNDLDHLEQLLQSSP--KSVPKIVAFETVHSMDGAVCPLEELCDVAHKYGAITFLDEV 341 (570)
T ss_pred hhhcCC---cceeec-------cCCHHHHHHHHHhCC--CCCCceEEEeeeeccCCCcCCHHHHHHHHHHhCceeeeehh
Confidence 998888 333333 459999999998753 34688999999999999999999999999999999999998
Q ss_pred cccccccC-----ccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhh-cCCccccCCccccCCCccCCC
Q 048643 288 YAGSACIC-----PEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSL-STNPEYLKNKATESKQVVDYK 361 (506)
Q Consensus 288 ~gg~~~~~-----~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~-~~~~~yl~~~~~~~~~~~~~~ 361 (506)
|+.++.-. -+.+.. +.+.|.|+....|.+++- |. |+.....+.+.+ +..+++++....
T Consensus 342 HAVGlYG~rGaGvgerdGv---m~kvDiIsGTLgKafGcV---GG-YIAat~~LvDmiRSyAaGFIFTTSL--------- 405 (570)
T KOG1360|consen 342 HAVGLYGPRGAGVGERDGV---MHKVDIISGTLGKAFGCV---GG-YIAATRKLVDMIRSYAAGFIFTTSL--------- 405 (570)
T ss_pred hhhccccCCCCCccccCCc---chhhhhcccchhhhcccc---cc-eehhhhhHHHHHHHhcCceEEecCC---------
Confidence 87654421 112222 358999999988887742 22 223333344444 345667764321
Q ss_pred CccccCCCCCCchHHHHHHHHh-chhHHHHHHHHHHHHHHHHHHHHHcCCCCc----c-ceEEEeecCCCcccccccccc
Q 048643 362 DWQITLSRRFRSLKLWLVIRNY-GVANLRHFLRSHVNMAKLFERLVASDKRVS----P-SAVMDKLKPKYENCHSQQLVT 435 (506)
Q Consensus 362 ~~~~~~sr~~~al~~~~~l~~~-G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~----p-~~v~f~~~~~~~~~~~~~~~~ 435 (506)
...--..|+ .+.+.+ +.|| +.+.+.+.++.+|+++.|.+. |+- | .||..++...
T Consensus 406 ----PP~vl~GAl---eaVr~lk~~eg-~~lR~~hqrnv~~~kq~l~~~-GiPVi~~pSHIiPv~vgda----------- 465 (570)
T KOG1360|consen 406 ----PPMVLAGAL---EAVRILKSEEG-RVLRRQHQRNVKYVKQLLMEL-GIPVIPNPSHIIPVRVGDA----------- 465 (570)
T ss_pred ----ChHHHHhHH---HHHHHHhhhhh-HHHHHHHHHHHHHHHHHHHHc-CCcccCCCcceeeeeccCH-----------
Confidence 111001223 334443 3445 344566778899999999886 554 5 8999988653
Q ss_pred hHHHHHHHHHHHHHHHHhcCcEEEe----eeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 048643 436 EEEAINEFNRELLESINASGKAYMT----HAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAF 498 (506)
Q Consensus 436 ~~~~~~~~~~~l~~~l~~~g~~~~~----~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l 498 (506)
.++.++.+.|+.+..+|+. ||+..|...+|+..+ |+.|.+-++.+++++...-+++
T Consensus 466 ------~l~~~~sd~Li~~h~iYvQaINyPTV~rG~E~LRiaPT-P~HT~~mm~~lv~~l~~vw~~v 525 (570)
T KOG1360|consen 466 ------ALAKQASDILISKHNIYVQAINYPTVARGTERLRIAPT-PHHTPQMMNILVNALLDVWNEV 525 (570)
T ss_pred ------HHHHHHHHHHHHhcCeEEEeccCCcccccceeeecCCC-CCCCHHHHHHHHHHHHHHHHHc
Confidence 5678888888877776764 567789999999996 5668879999999999887765
No 231
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.67 E-value=2.2e-14 Score=146.63 Aligned_cols=310 Identities=11% Similarity=0.075 Sum_probs=185.3
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHH
Q 048643 127 SPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQK 206 (506)
Q Consensus 127 ~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~k 206 (506)
+|...++| +++++.+|.+ ..++|+|||+|+..++.+..-. ++..|+++..+|.+...
T Consensus 30 g~~~~~~e----~~la~~~g~~---------~~v~~~sgt~aL~~~l~al~~~----------pGd~Viv~~~t~~~~~~ 86 (376)
T TIGR02379 30 GPFSRRCE----TWLENRTGTK---------KALLTPSCTAALEMAALLLDIQ----------PGDEVIMPSYTFVSTAN 86 (376)
T ss_pred cHHHHHHH----HHHHHHhCCC---------eEEEeCCHHHHHHHHHHHcCCC----------CcCEEEECCCCcHHHHH
Confidence 45455555 5677777764 5689999999876666543111 66788899999999999
Q ss_pred HHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeec
Q 048643 207 AAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDA 286 (506)
Q Consensus 207 a~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDa 286 (506)
++...|+ +++.++++++ ++.+|+++|++++++.++ +|+. ++++|..-|+++|.++|++||+++++|+
T Consensus 87 ~~~~~G~---~~v~vd~d~~-~~~~d~~~le~~i~~~tk------~Iip---~~~~G~~~d~~~I~~la~~~~i~vIeDa 153 (376)
T TIGR02379 87 AFVLRGA---KIVFVDIRPD-TMNIDETLIESAITHRTK------AIVP---VHYAGVACDMDTIMALANKHQLFVIEDA 153 (376)
T ss_pred HHHHcCC---EEEEEecCCC-cCCCCHHHHHHhcCcCce------EEEE---eCCCCCccCHHHHHHHHHHCCCEEEEEC
Confidence 9999999 9999999864 478999999999876433 5554 4568999999999999999999999999
Q ss_pred ccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCcccc
Q 048643 287 AYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQIT 366 (506)
Q Consensus 287 A~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~ 366 (506)
||+.+...... .+..+..+.++++.+.|.+......|++++.+++...+..... .+=...........+... ...
T Consensus 154 a~~~g~~~~~~---~~g~~~~~~~fSf~~~K~l~~g~~gG~v~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~-~~~ 228 (376)
T TIGR02379 154 AQGVMSTYKGR---ALGSIGHLGTFSFHETKNYTSGGEGGALLINDQAFIERAEIIR-EKGTNRSQFFRGEVDKYT-WRD 228 (376)
T ss_pred ccccCCccCCc---ccCCCCCEEEEeCCCCCcCcccCCceEEEECCHHHHHHHHHHH-HhCCCCccccccCCCcce-eee
Confidence 99765432211 1111223445555555666543357888888765443221100 000000000000000000 011
Q ss_pred CCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCC--C-Cc----c-------ceEEEeecCCCccccccc
Q 048643 367 LSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDK--R-VS----P-------SAVMDKLKPKYENCHSQQ 432 (506)
Q Consensus 367 ~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~--~-~~----p-------~~v~f~~~~~~~~~~~~~ 432 (506)
.+.+++.-.+-+++-.-..+.+.+.+++..+++++..+.|...+ + .+ | ..+++++.+.
T Consensus 229 ~g~n~~~~~~~Aa~g~~qL~~l~~~~~~r~~~~~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-------- 300 (376)
T TIGR02379 229 IGSSYLPSELQAAYLWAQLEQADRINQDRLATWQLYQDALKPLEEKGIIELPSIPNGCQHNAHMFYIKLKDE-------- 300 (376)
T ss_pred ecccCCccHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhccCCcCCeeeCCCCCCCCeeeeEEEEEEECCc--------
Confidence 22233332222333222346778888888999999999987653 1 22 2 1233333221
Q ss_pred ccchHHHHHHHHHHHHHHHHhcCcEEEe---eee-------E---C---------CEEEEEEEecCCCCCHHHHHHHHHH
Q 048643 433 LVTEEEAINEFNRELLESINASGKAYMT---HAV-------C---G---------GIYAMRFAVGATLTEERHVMVAWTM 490 (506)
Q Consensus 433 ~~~~~~~~~~~~~~l~~~l~~~g~~~~~---~~~-------~---~---------g~~~lR~~~~~~~tt~edi~~li~~ 490 (506)
....++.+.|.++|+..-. +.. + . ....+.+-+ ++..+++|++++++.
T Consensus 301 ---------~~r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~~~~~~~~~l~LP~-~~~l~~~~~~~i~~~ 370 (376)
T TIGR02379 301 ---------DDRNELIKYLKEQEIMAVFHYVPLHSSPAGRYFGRFHGEDIYTTKESERLVRLPL-YYGLSKEDQARVIQT 370 (376)
T ss_pred ---------CCHHHHHHHHHHCCCCccccCcCCCcchhHHhhCCCCCCChHHHHHHhceEEccC-CCCCCHHHHHHHHHH
Confidence 0124666677777763110 100 0 0 023455544 788899999999999
Q ss_pred HHHHH
Q 048643 491 VQEQL 495 (506)
Q Consensus 491 l~~~~ 495 (506)
|+++.
T Consensus 371 i~~~~ 375 (376)
T TIGR02379 371 ICDYL 375 (376)
T ss_pred HHHHh
Confidence 98763
No 232
>PRK06460 hypothetical protein; Provisional
Probab=99.67 E-value=1.5e-14 Score=147.78 Aligned_cols=218 Identities=17% Similarity=0.103 Sum_probs=142.8
Q ss_pred ccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCC----
Q 048643 125 ISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQT---- 200 (506)
Q Consensus 125 ~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~---- 200 (506)
...|...++|+. +++++|.+. .+++++|++|+..++.+... ++..|+++...
T Consensus 42 ~~~p~~~~L~~~----lA~l~g~~~---------~v~~~sG~~ai~~~l~al~~-----------~Gd~Vl~~~~~~~~t 97 (376)
T PRK06460 42 EANPTVLELTKK----IVELENAEM---------GVAFSSGMGAISTTALALLK-----------PGNSVLVHRDMFGRS 97 (376)
T ss_pred CCCccHHHHHHH----HHHHhCCCc---------EEEeCCHHHHHHHHHHHHhC-----------CCCEEEEecCCcCcH
Confidence 455666666654 777777753 35567777777666554422 44556666443
Q ss_pred chHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCC
Q 048643 201 HCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGI 280 (506)
Q Consensus 201 H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~ 280 (506)
+..+.+.++..|+ +++.++.+. .+.+++.+++ .+.+|+++.++|++|.+-|+++|+++|+++|+
T Consensus 98 y~~~~~~~~~~G~---~v~~~~~~~-------~~~l~~~~~~------~tklV~l~sp~NPtG~v~d~~~I~~la~~~g~ 161 (376)
T PRK06460 98 YRFFTDYLKNWGV---NVDASNPGS-------DNIIEKAKSK------RYDVVFVENITNPLLRVVDITELSKVCKENGS 161 (376)
T ss_pred HHHHHHHHHhhCc---EEEEECCCC-------HHHHHHhcCC------CceEEEEECCCCCCCcccCHHHHHHHHHHcCC
Confidence 3344567788898 888887542 2334443322 24588899999999999999999999999999
Q ss_pred EEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCc--ceEEEEeCchhHHhhhcCCccccCCccccCCCcc
Q 048643 281 WVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLD--CCCLWVKDPSALVSSLSTNPEYLKNKATESKQVV 358 (506)
Q Consensus 281 ~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~ 358 (506)
+++||++|+.+.... .+. .++|.++.++||+++.+-+ .|+++ .+++.. +.+.....+.
T Consensus 162 ~vivDea~~~~~~~~----~l~---~~~divv~S~sK~l~G~~~~~~G~~~-~~~~l~-~~l~~~~~~~----------- 221 (376)
T PRK06460 162 ILIVDATFSTPINQK----PLE---LGADIVVHSASKFLAGHNDVIAGLAA-GYGKLL-NVIDQMRRTL----------- 221 (376)
T ss_pred EEEEECCcCccccCC----hhh---cCCCEEEeecceeccCCCCceEEEEe-cCHHHH-HHHHHHHHhc-----------
Confidence 999999997543211 111 1589999999999875432 56544 444432 2221100001
Q ss_pred CCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc
Q 048643 359 DYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS 413 (506)
Q Consensus 359 ~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~ 413 (506)
+ -...+...|.+++ |.+.+..++++..+++.++.+.|+++|.++
T Consensus 222 -----g----~~~~~~~a~~~l~--~~~~l~~r~~~~~~n~~~l~~~L~~~p~v~ 265 (376)
T PRK06460 222 -----G----TSLDPHAAYLTLR--GIKTLKIRMDVINRNAEQIAEFLEGHPKVV 265 (376)
T ss_pred -----C----CCCCHHHHHHHHh--chhhHHHHHHHHHHHHHHHHHHHHcCCCcc
Confidence 0 0112345566666 568889999999999999999999887764
No 233
>PRK07908 hypothetical protein; Provisional
Probab=99.67 E-value=3e-14 Score=144.68 Aligned_cols=300 Identities=14% Similarity=0.091 Sum_probs=183.5
Q ss_pred HHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhh
Q 048643 105 IAGFLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKI 184 (506)
Q Consensus 105 ~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~ 184 (506)
++..+.+.+...++. ...|........+. +++++.+|.+.+ ..++|+|+++++..++. . .
T Consensus 36 ~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr----~aia~~~~~~~~-------~I~it~Ga~~al~~~~~-l-----~-- 95 (349)
T PRK07908 36 PPEWLRERLAARLGD-LAAYPSTEDERRAR----AAVAARHGRTPD-------EVLLLAGAAEGFALLAR-L-----R-- 95 (349)
T ss_pred CCHHHHHHHHHHhhH-hhcCCCccchHHHH----HHHHHHhCcChh-------hEEECCCHHHHHHHHHh-c-----C--
Confidence 344445555544432 12333223344444 555666677654 78999999998765443 1 1
Q ss_pred cccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCc
Q 048643 185 GRENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITA 264 (506)
Q Consensus 185 ~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~ 264 (506)
++.++ +...++......++..|+ +++.+|++. ++.+|++.++ +. +.+|+++.++|+||.
T Consensus 96 -----~~~vi-v~~P~y~~~~~~~~~~G~---~i~~v~~~~--~~~~d~~~l~----~~------~~~i~l~np~NPTG~ 154 (349)
T PRK07908 96 -----PRRAA-VVHPSFTEPEAALRAAGI---PVHRVVLDP--PFRLDPAAVP----DD------ADLVVIGNPTNPTSV 154 (349)
T ss_pred -----CCeEE-EeCCCChHHHHHHHHcCC---EEEeeccCc--ccCcChhHhc----cC------CCEEEEcCCCCCCCC
Confidence 33333 445777777888899999 999999875 3789998653 21 236778899999999
Q ss_pred ccChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEE-cCccccC-CCCcceEEEEeCchhHHhhhcC
Q 048643 265 VDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSL-NAHKWFF-TTLDCCCLWVKDPSALVSSLST 342 (506)
Q Consensus 265 idpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~-~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~ 342 (506)
+-+.++|.++|++ +.|+++|++|+-+. .. .... +.....-+.+++ +++|.++ ....+|+++.. +..+ +.+..
T Consensus 155 ~~~~~~l~~l~~~-~~~iIvDe~y~~~~-~~-~~~~-l~~~~~~~~i~i~S~SK~~~l~GlRiG~~~~~-~~~~-~~~~~ 228 (349)
T PRK07908 155 LHPAEQLLALRRP-GRILVVDEAFADAV-PG-EPES-LAGDDLPGVLVLRSLTKTWSLAGLRVGYALGA-PDVL-ARLTR 228 (349)
T ss_pred CcCHHHHHHHHhc-CCEEEEECcchhhc-cC-Cccc-cccccCCCEEEEeecccccCCccceeeeeecC-HHHH-HHHHh
Confidence 9999999999964 78999999997542 11 1111 111122356666 7899887 55778988864 3332 22321
Q ss_pred CccccCCccccCCCccCCCCccccCCCCCCchHHHHH-HHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c---c
Q 048643 343 NPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLV-IRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS---P---S 415 (506)
Q Consensus 343 ~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~-l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p---~ 415 (506)
..... .. .+ ....+... ++..+.+.++++.++..++.+++.+.|++. +++ | +
T Consensus 229 ~~~~~----------------~~-~~---~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~~p~~g~ 287 (349)
T PRK07908 229 GRAHW----------------PV-GT---LQLEAIAACCAPRAVAEAAADAARLAADRAEMVAGLRAV-GARVVDPAAAP 287 (349)
T ss_pred cCCCC----------------Cc-cH---HHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHhC-CcEeccCCCce
Confidence 10000 00 00 01111111 111123456677788888899999999887 666 3 5
Q ss_pred eEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeEC--CEEEEEEEecCCCCCHHHHHHHHHHHHH
Q 048643 416 AVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCG--GIYAMRFAVGATLTEERHVMVAWTMVQE 493 (506)
Q Consensus 416 ~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--g~~~lR~~~~~~~tt~edi~~li~~l~~ 493 (506)
.+.+++.+ ...+.+.+.++|+....+..+. +..++|+++. +++++++++++|++
T Consensus 288 ~~~~~~~~--------------------~~~~~~~l~~~gI~v~~g~~f~~~~~~~vRis~~----~~~~~~~l~~al~~ 343 (349)
T PRK07908 288 FVLVRVPD--------------------AELLRKRLRERGIAVRRGDTFPGLDPDYLRLAVR----PRAEVPVLVQALAE 343 (349)
T ss_pred EEEEECCc--------------------HHHHHHHHHhCCEEEEECCCCCCCCCCeEEEEeC----CCccHHHHHHHHHH
Confidence 55555421 1356666767777544433332 3579999994 56699999999988
Q ss_pred HHH
Q 048643 494 QLE 496 (506)
Q Consensus 494 ~~~ 496 (506)
+..
T Consensus 344 ~~~ 346 (349)
T PRK07908 344 ILK 346 (349)
T ss_pred HHh
Confidence 743
No 234
>PLN02368 alanine transaminase
Probab=99.67 E-value=3.1e-14 Score=146.71 Aligned_cols=269 Identities=11% Similarity=-0.007 Sum_probs=177.3
Q ss_pred HHHHHHHHHHhhc--CCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHH
Q 048643 105 IAGFLGEMLSSGF--NVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLN 182 (506)
Q Consensus 105 ~~~~~~~~l~~~~--n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~ 182 (506)
++..+.+.+.... +.....|....+..++.+.+.+|+.+..|++.+. ...++|+|+++++..++.+....
T Consensus 82 p~~~i~~a~~~l~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~-----~~I~it~Ga~~al~~~~~~l~~~--- 153 (407)
T PLN02368 82 PADAIARAKHYLSLTSGGLGAYSDSRGLPGVRKEVAEFIERRDGYPSDP-----ELIFLTDGASKGVMQILNAVIRG--- 153 (407)
T ss_pred CHHHHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCh-----hhEEEcccHHHHHHHHHHHHcCC---
Confidence 3444555544321 2223456655567889999999999988865331 37899999998887776655311
Q ss_pred hhcccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCC
Q 048643 183 KIGRENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAI 262 (506)
Q Consensus 183 ~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~t 262 (506)
++..|+++..++..+...++..|. +++.||++++++|.+|++.|++++++...++.++.+++.+.++|+|
T Consensus 154 -------pGd~Vli~~P~Y~~y~~~~~~~g~---~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPT 223 (407)
T PLN02368 154 -------EKDGVLVPVPQYPLYSATISLLGG---TLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPT 223 (407)
T ss_pred -------CCCEEEEeCCCCccHHHHHHHcCC---EEEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCC
Confidence 567788899999999999999999 9999999865568999999999998644344346678888999999
Q ss_pred Cccc---ChhHHHHHHHHhCCEEEeecccccccccC----ccchhhhcCC----C-CCCeeE-EcCcccc-C-CCCcceE
Q 048643 263 TAVD---PLKPLCDVAKQFGIWVHVDAAYAGSACIC----PEFQHFIDGV----E-GADSFS-LNAHKWF-F-TTLDCCC 327 (506)
Q Consensus 263 G~id---pl~~I~~ia~~~g~~lhVDaA~gg~~~~~----~~~~~~~~gi----~-~aDsi~-~~~hK~l-~-~p~~~g~ 327 (506)
|.+- .+++|+++|++||+|+++|.+|+....-. ......+..+ + ....|+ .++.|.+ + ..+-+|+
T Consensus 224 G~v~s~e~l~~l~~~a~~~~~~II~DE~Y~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy 303 (407)
T PLN02368 224 GQCLSEANLREILKFCYQERLVLLGDEVYQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGY 303 (407)
T ss_pred CccCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEE
Confidence 9994 47788889999999999999997654311 1111111111 1 112343 4579997 4 5577898
Q ss_pred EEE--eCchhHHhhhcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhc-----h-------hHHHHHHH
Q 048643 328 LWV--KDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYG-----V-------ANLRHFLR 393 (506)
Q Consensus 328 ~~~--r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G-----~-------~g~~~~i~ 393 (506)
+++ .++..+ +.+.... ... .+ ...+.-+++...+. . +..+++++
T Consensus 304 ~i~~~~~~~li-~~~~~~~-~~~------------------~~--~~~~~Q~aa~~~l~~~~~~~~~~~~~~~~~~~~~~ 361 (407)
T PLN02368 304 FEMTNIPPKTV-EEIYKVA-SIA------------------LS--PNVSGQIFMGLMVNPPKPGDISYDQFVRESKGILE 361 (407)
T ss_pred EEEeCCCHHHH-HHHHHHh-ccc------------------CC--CCcHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHH
Confidence 875 333333 2222110 000 00 12233334444332 1 11234677
Q ss_pred HHHHHHHHHHHHHHcCCCCc
Q 048643 394 SHVNMAKLFERLVASDKRVS 413 (506)
Q Consensus 394 ~~~~~a~~l~~~l~~~~~~~ 413 (506)
...+.++++.+.|+++|++.
T Consensus 362 ~~~~rr~~~~~~L~~~~g~~ 381 (407)
T PLN02368 362 SLRRRARMMTDGFNSCKNVV 381 (407)
T ss_pred HHHHHHHHHHHHHhCCCCeE
Confidence 78888999999999998887
No 235
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.67 E-value=1.5e-14 Score=147.40 Aligned_cols=214 Identities=19% Similarity=0.140 Sum_probs=144.1
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHH
Q 048643 126 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQ 205 (506)
Q Consensus 126 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 205 (506)
..|...++|+. ++++. .. ..+++++|+.|+..++.+... ++..|+++...|+...
T Consensus 49 ~~p~~~~Le~~----lA~l~--~~--------~~v~~~sG~~Ai~~~l~all~-----------~Gd~Vl~~~~~y~~~~ 103 (366)
T PRK07582 49 SNPTWRALEAA----LGELE--GA--------EALVFPSGMAAITAVLRALLR-----------PGDTVVVPADGYYQVR 103 (366)
T ss_pred CCccHHHHHHH----HHHHc--CC--------CEEEECCHHHHHHHHHHHhcC-----------CCCEEEEeCCCcHhHH
Confidence 45666777766 55555 22 467888888887766654321 5567777777887665
Q ss_pred HHH----HHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCE
Q 048643 206 KAA----QIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIW 281 (506)
Q Consensus 206 ka~----~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~ 281 (506)
..+ ...|+ +++.++.++. +. .+.+. +.+|++..++|++|.+.|+++|+++|+++|++
T Consensus 104 ~~~~~~l~~~G~---~v~~v~~~~~--~~--------~~~~~------t~lV~le~p~NPtg~v~di~~I~~~a~~~g~~ 164 (366)
T PRK07582 104 ALAREYLAPLGV---TVREAPTAGM--AE--------AALAG------ADLVLAETPSNPGLDVCDLAALAAAAHAAGAL 164 (366)
T ss_pred HHHHHHHhcCeE---EEEEECCCCh--HH--------HhccC------ceEEEEECCCCCCCCccCHHHHHHHHHHcCCE
Confidence 544 34688 8888887531 11 12222 33788889999999999999999999999999
Q ss_pred EEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCc--ceEEEEeCchhHHhhhcCCccccCCccccCCCccC
Q 048643 282 VHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLD--CCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVD 359 (506)
Q Consensus 282 lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 359 (506)
++||++|+.+....+ .. -++|.++.++|||+..|.+ .|++++++++.. ..+.....+..
T Consensus 165 lvVD~t~~~~~~~~p-~~------~g~Divv~S~sK~l~G~~g~~~G~v~~~~~~l~-~~l~~~~~~~g----------- 225 (366)
T PRK07582 165 LVVDNTTATPLGQRP-LE------LGADLVVASDTKALTGHSDLLLGYVAGRDPELM-AAVERWRLLAG----------- 225 (366)
T ss_pred EEEECCCCCccccCc-hh------cCCcEEEecccccccCCCCeeEEEEEcCcHHHH-HHHHHHHHHhC-----------
Confidence 999999964322111 11 1689999999999988766 577776665433 22211111110
Q ss_pred CCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc
Q 048643 360 YKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS 413 (506)
Q Consensus 360 ~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~ 413 (506)
-...++..|..++.+ +.+..+++++.+++..+.+.|+++|.++
T Consensus 226 ---------~~~~~~~a~l~~r~l--~tl~~R~~~~~~na~~la~~L~~~p~v~ 268 (366)
T PRK07582 226 ---------AIPGPFEAWLAHRSL--GTLGLRFARQCANALAVAELLAGHPAVR 268 (366)
T ss_pred ---------CCCCHHHHHHHHhcc--ccHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 011345667777654 4677888999999999999999988765
No 236
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.67 E-value=1.5e-14 Score=148.90 Aligned_cols=240 Identities=16% Similarity=0.161 Sum_probs=159.5
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHH
Q 048643 126 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQ 205 (506)
Q Consensus 126 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 205 (506)
.+|...++|+. ++++.|.. .++.+++|+.|+..++.+... ++..|+++...+.+..
T Consensus 59 ~nPtv~~lE~~----la~leg~~---------~av~~~SG~aAi~~al~all~-----------~GD~VI~~~~~Y~~T~ 114 (432)
T PRK06702 59 GNPTLAAFEQK----LAELEGGV---------GAVATASGQAAIMLAVLNICS-----------SGDHLLCSSTVYGGTF 114 (432)
T ss_pred CCcHHHHHHHH----HHHHhCCC---------cEEEECCHHHHHHHHHHHhcC-----------CCCEEEECCCchHHHH
Confidence 46777888866 66666654 468899999999888876532 6678888988886555
Q ss_pred HH----HHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCE
Q 048643 206 KA----AQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIW 281 (506)
Q Consensus 206 ka----~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~ 281 (506)
.. +..+|+ +++.+.. .+|++.|+++|+++++ +|++..++++++.+-|+++|+++|+++|++
T Consensus 115 ~~~~~~l~~~Gi---~v~~vd~------~~d~~~l~~~I~~~Tk------~I~~e~pgnP~~~v~Di~~I~~iA~~~gi~ 179 (432)
T PRK06702 115 NLFGVSLRKLGI---DVTFFNP------NLTADEIVALANDKTK------LVYAESLGNPAMNVLNFKEFSDAAKELEVP 179 (432)
T ss_pred HHHHHHHHHCCC---EEEEECC------CCCHHHHHHhCCcCCe------EEEEEcCCCccccccCHHHHHHHHHHcCCE
Confidence 54 567788 8888742 5799999999987654 777888999999999999999999999999
Q ss_pred EEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCc--ceEEEEeCc-hhHH----hhhcCCccc-----cCC
Q 048643 282 VHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLD--CCCLWVKDP-SALV----SSLSTNPEY-----LKN 349 (506)
Q Consensus 282 lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~--~g~~~~r~~-~~l~----~~~~~~~~y-----l~~ 349 (506)
+++|.+|+...+.-| +.. +||.++-+..||++..-+ .|+++.... .+.. ......+.| ..+
T Consensus 180 livD~T~~tP~~~~p-l~~------GADIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~ 252 (432)
T PRK06702 180 FIVDNTLATPYLCQA-FEH------GANIIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDPSYHGVSYVQN 252 (432)
T ss_pred EEEECCCCchhhCCh-hhc------CCCEEEEccccccCCCcceeceEEEeCCCcccccccccccccccccccccchhhc
Confidence 999999975543322 221 899999999999986533 333332211 1100 000000000 000
Q ss_pred ccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc
Q 048643 350 KATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS 413 (506)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~ 413 (506)
......-......+....+-...++..|+.++ |.+.+..+++++.+++..+.+.|+++|.++
T Consensus 253 ~~~~~~~~~~~~~~~~~~g~~~sp~~a~l~~r--gL~Tl~lR~~r~~~Na~~la~~L~~~p~V~ 314 (432)
T PRK06702 253 FGAAAYIVKARVQLLRDYGNCMSPFNAYISNI--GLETLHLRMERHSENALAVAKWLADHERIE 314 (432)
T ss_pred cchhhHHHHHHHHHHHHccCCCCHHHHHHHHh--ccCcHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 00000000000000111222446677787777 457788999999999999999999988765
No 237
>PLN02672 methionine S-methyltransferase
Probab=99.66 E-value=5.3e-14 Score=156.63 Aligned_cols=319 Identities=12% Similarity=0.121 Sum_probs=190.3
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHH
Q 048643 131 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQI 210 (506)
Q Consensus 131 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~ 210 (506)
..+...+.+|+++.+|++.+. ....++++|+++++..++.+..+ ++..|+++..+++.+..+++.
T Consensus 733 pdlr~aLa~~la~~~Gv~~d~----~e~IIvt~Gs~elL~lll~aLl~-----------pGD~VLVp~PtY~~Y~~~a~~ 797 (1082)
T PLN02672 733 TDPRPSILQFIKSNYGFPTDS----CTEFVYGDTSLALFNKLVLCCVQ-----------EGGTLCFPAGSNGTYVSAAKF 797 (1082)
T ss_pred hHHHHHHHHHHHHHhCcCCCC----CCEEEEeCCHHHHHHHHHHHHcC-----------CCCEEEEeCCChHHHHHHHHH
Confidence 456788999999999997641 01455555554444344443333 667788899999999999999
Q ss_pred hCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccC-CCCCcc---cChhHHHHHHHHhCCEEEeec
Q 048643 211 VGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGT-TAITAV---DPLKPLCDVAKQFGIWVHVDA 286 (506)
Q Consensus 211 ~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gt-t~tG~i---dpl~~I~~ia~~~g~~lhVDa 286 (506)
.|. +++.||+++++++.+|++.|++++++..+ + .|+.+.++ |+||.+ +.+++|+++|++||+++++|.
T Consensus 798 ~Ga---~vv~Vpl~~e~gf~lD~d~Le~al~~~~~----~-~I~L~nPnhNPTG~v~S~eeLe~Llela~k~di~VIsDE 869 (1082)
T PLN02672 798 LKA---NFRRIPTKSSDGFKLTAKTLASTLETVKK----P-WVYISGPTINPTGLLYSNSEIEEILSVCAKYGARVIIDT 869 (1082)
T ss_pred cCC---EEEEEecccccCCCCCHHHHHHHhccCCC----C-EEEEECcCCCCcCccCCHHHHHHHHHHHHHcCCEEEEeC
Confidence 999 99999997655689999999999864211 2 57777776 999999 457888999999999999999
Q ss_pred ccccccccCcc-----chhhhcCCCC---C-Ce-eEEcCccccC-CCCcceEEEEeCchhHHhhhcCCccccCCccccCC
Q 048643 287 AYAGSACICPE-----FQHFIDGVEG---A-DS-FSLNAHKWFF-TTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESK 355 (506)
Q Consensus 287 A~gg~~~~~~~-----~~~~~~gi~~---a-Ds-i~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~ 355 (506)
+|+....-.+. ....+..... . .. +..++.|.++ ..+.+|+++..++... +.+.....+...
T Consensus 870 aYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpGLRIGylIap~~eLi-~~l~~~~~~s~~------ 942 (1082)
T PLN02672 870 SFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELLSGGHEFGFLALNDSVLI-DAFHSAPGLSRP------ 942 (1082)
T ss_pred CCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhccHHHHheeEEeCCHHHH-HHHHHhhhhcCC------
Confidence 99754432111 1111111111 1 12 3336775555 4577999887655332 233211111100
Q ss_pred CccCCCCccccCCCCCCchHHHHHHHHhc------hhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c--ceEEEeecCC
Q 048643 356 QVVDYKDWQITLSRRFRSLKLWLVIRNYG------VANLRHFLRSHVNMAKLFERLVASDKRVS---P--SAVMDKLKPK 424 (506)
Q Consensus 356 ~~~~~~~~~~~~sr~~~al~~~~~l~~~G------~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p--~~v~f~~~~~ 424 (506)
. ....+.+...+..+. .+.+.+..+...+..+++.+.|++. +++ | +.+.|.-.+.
T Consensus 943 -----------~--~~~q~Aaaaalall~~~~~~~~~~l~e~r~~Lk~rRd~L~e~L~~~-Gi~v~~PeGGFfLwl~l~~ 1008 (1082)
T PLN02672 943 -----------H--STLKYTIKKLLGLKNQKSSDLLDGVAEQKKILKSRAERLKETLEAC-GWDVLEPQGGISMVAKPSA 1008 (1082)
T ss_pred -----------C--cHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCeEecCCcEEEEEEEccc
Confidence 0 001122222222221 1345566666788889999999887 666 5 4444432110
Q ss_pred Ccccccccccch-HHHHHHHHHHHHHHHHhcCcEEEeeeeE-CCEEEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 048643 425 YENCHSQQLVTE-EEAINEFNRELLESINASGKAYMTHAVC-GGIYAMRFAVGATLTEERHVMVAWTMVQEQLE 496 (506)
Q Consensus 425 ~~~~~~~~~~~~-~~~~~~~~~~l~~~l~~~g~~~~~~~~~-~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~ 496 (506)
.....++....+ .........++.+.|.++..+.+.++.+ ...+++|++++ ++++++++.++.|++..+
T Consensus 1009 ~l~~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~FG~~g~~RIsfa---~~~e~LeeALerL~kf~~ 1079 (1082)
T PLN02672 1009 YLGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLCINSSSWTGIPGYCRFSFA---LEDSEFDRALKAIARFKE 1079 (1082)
T ss_pred cccccccccccccccccCCCHHHHHHHHHHcCCEEEecCcccCCCCeEEEEec---CCHHHHHHHHHHHHHHHH
Confidence 000000000000 0000001246777777663445555544 33579999996 367799999999988654
No 238
>KOG0630 consensus Predicted pyridoxal-dependent decarboxylase [Amino acid transport and metabolism]
Probab=99.66 E-value=1.5e-14 Score=142.79 Aligned_cols=262 Identities=18% Similarity=0.275 Sum_probs=178.3
Q ss_pred hHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHh-hcccC------CCCeEEEeCCCCch
Q 048643 130 ATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNK-IGREN------ISKLVVYGSDQTHC 202 (506)
Q Consensus 130 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~-~~~~~------~~~~~v~~s~~~H~ 202 (506)
+.-+.-.+-.|++.+|.+.++-.+.......|...-..++..++..|....... .-.+| ...+++|+|...|.
T Consensus 163 an~i~Gdanh~fgnLF~FAdsqiycsdPaasfhadiadai~haVkLAikar~~~dhs~eG~~afaa~aaPt~YiS~alh~ 242 (838)
T KOG0630|consen 163 ANSISGDANHVFGNLFHFADSQIYCSDPAASFHADIADAIGHAVKLAIKARCGGDHSLEGGIAFAALAAPTFYISEALHM 242 (838)
T ss_pred HHhhccchHHHHHHHHhhcccccccCCchhhhhhhhhhHHHHHHHhhhhhccCCccccccccchHhhcCceEEEcccccH
Confidence 344455566888999988764212111122222221222333333332211110 00111 24678999999997
Q ss_pred HH-HHHHHHhCCCCCCeEEEecCCCC--CcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhC
Q 048643 203 AL-QKAAQIVGIDLKNFRAIKTTKSS--SYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFG 279 (506)
Q Consensus 203 s~-~ka~~~~G~g~~~v~~v~~~~~~--~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g 279 (506)
-. .-+|+-+|+....+.+++-...+ .|+||...+++.|+++..+|++|.++++..|++-.|..|-+-+|.++|++|+
T Consensus 243 ~l~hYaarefGIa~~aI~~~~dhdqgeiegriDhh~feKiideDlaagkkPLilia~iGasi~GqnDmi~kildi~eaha 322 (838)
T KOG0630|consen 243 DLLHYAAREFGIADEAIKPILDHDQGEIEGRIDHHLFEKIIDEDLAAGKKPLILIADIGASICGQNDMILKILDICEAHA 322 (838)
T ss_pred HHHHHHHHHhCCchhheecccccccccccccccHHHHHHHHHHHHhCCCCCeEEEEeccchhhcchHHHHHHHHHHHHhh
Confidence 54 45888999965555555432211 3699999999999999999999999999999999999999999999999997
Q ss_pred -CEEEeecccccccccCccchhhhcC-CCCCCeeEEcCccccCCCCcceEEEEeCchhH-HhhhcCCccccCCccccCCC
Q 048643 280 -IWVHVDAAYAGSACICPEFQHFIDG-VEGADSFSLNAHKWFFTTLDCCCLWVKDPSAL-VSSLSTNPEYLKNKATESKQ 356 (506)
Q Consensus 280 -~~lhVDaA~gg~~~~~~~~~~~~~g-i~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l-~~~~~~~~~yl~~~~~~~~~ 356 (506)
+|+|.-| ++..++.|.+....+.. .+..||++++.--||+.|-.--+++-|.-+-. ..+|..
T Consensus 323 kfWLHasG-haiAALt~aepnnil~HV~eqldSMal~ialWLGiPSaPiV~LHRPleg~aaSafes-------------- 387 (838)
T KOG0630|consen 323 KFWLHASG-HAIAALTCAEPNNILGHVEEQLDSMALNIALWLGIPSAPIVLLHRPLEGSAASAFES-------------- 387 (838)
T ss_pred heeEeecc-chhhheeecCcccchhHHHHHHhhccchhHHHhCCCCCceEEeecccccccchhccc--------------
Confidence 9999987 55555555443222211 34789999999999999965444444432110 011111
Q ss_pred ccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc
Q 048643 357 VVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS 413 (506)
Q Consensus 357 ~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~ 413 (506)
-.-..++.+++.+|.+++++|...+.++++....+++.+.+.+.+.++++
T Consensus 388 -------dpi~rekLdaLp~Wta~q~LggKaIadmienAFll~kilfe~aSa~~eie 437 (838)
T KOG0630|consen 388 -------DPILREKLDALPLWTALQALGGKAIADMIENAFLLCKILFEGASACEEIE 437 (838)
T ss_pred -------ChHHHHhhccchHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhcCCcee
Confidence 11255678999999999999999999999999999999999999988876
No 239
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.66 E-value=9.5e-14 Score=142.35 Aligned_cols=297 Identities=11% Similarity=0.045 Sum_probs=183.6
Q ss_pred hhhHHHHHHHHHHHHHHcC--CCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHH
Q 048643 128 PAATELENIVMDWLGQMLK--LPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQ 205 (506)
Q Consensus 128 p~~~~lE~~~~~~la~l~g--~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 205 (506)
++..++.+.+.+|+.+..| .+.+. ...++|+|+++++..++.+.... ++..|++...++..+.
T Consensus 66 ~G~~~Lr~aia~~~~~~~~~~~~v~~-----~~I~it~Ga~~al~~~~~~~~~~----------g~~~Vlv~~P~y~~~~ 130 (374)
T PRK02610 66 GGHEALKQAIAEYVNESAAGSSQITP-----ANISVGNGSDELIRSLLIATCLG----------GEGSILVAEPTFSMYG 130 (374)
T ss_pred CchHHHHHHHHHHhCccccccCCCCH-----HHEEEcCChHHHHHHHHHHHcCC----------CCCeEEEcCCChHHHH
Confidence 5678888888888887653 22221 26889999888876555443221 2236788889999999
Q ss_pred HHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHH-HhCCEEEe
Q 048643 206 KAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAK-QFGIWVHV 284 (506)
Q Consensus 206 ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~-~~g~~lhV 284 (506)
.+++.+|+ +++.+|.+++ ++.+|+++|++++++.. ...+-+|+++.++|+||.+-+.+++.++++ .+++|+++
T Consensus 131 ~~~~~~g~---~~~~~~~~~~-~~~~d~~~l~~~~~~~~--~~~~k~i~l~~P~NPTG~~~s~~~l~~l~~~~~~~~iI~ 204 (374)
T PRK02610 131 ILAQTLGI---PVVRVGRDPE-TFEIDLAAAQSAIEQTQ--NPPVRVVFVVHPNSPTGNPLTAAELEWLRSLPEDILVVI 204 (374)
T ss_pred HHHHHcCC---EEEEecCCcc-cCCCCHHHHHHHHHhhc--CCCceEEEEeCCCCCCCCCCCHHHHHHHHhccCCcEEEE
Confidence 99999999 9999998643 57999999999986421 112447777889999999977666655543 14899999
Q ss_pred ecccccccccCccchhhhcCCCCCCeeEEcCccccC-CCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCc
Q 048643 285 DAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFF-TTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDW 363 (506)
Q Consensus 285 DaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~ 363 (506)
|.+|..+... ..... +..... -.+..++.|.++ ....+|+++. ++... +.+.... +. +
T Consensus 205 De~Y~~~~~~-~~~~~-~~~~~~-~ivi~SfSK~~g~~GlRiG~~v~-~~~l~-~~l~~~~-~~---------------~ 263 (374)
T PRK02610 205 DEAYFEFSQT-TLVGE-LAQHPN-WVILRTFSKAFRLAAHRVGYAIG-HPELI-AVLEKVR-LP---------------Y 263 (374)
T ss_pred eccccccCcc-chHHH-HhcCCC-EEEEEecchhccCcccceeeeec-CHHHH-HHHHHhc-CC---------------C
Confidence 9999754211 11111 111111 134567899996 5577888875 33332 3332111 00 0
Q ss_pred cccCCCCCCchHHHHHHHHhch-hHHHHHHHHHHHHHHHHHHHHHcCCCCc--c---ceEEEeecCCCcccccccccchH
Q 048643 364 QITLSRRFRSLKLWLVIRNYGV-ANLRHFLRSHVNMAKLFERLVASDKRVS--P---SAVMDKLKPKYENCHSQQLVTEE 437 (506)
Q Consensus 364 ~~~~sr~~~al~~~~~l~~~G~-~g~~~~i~~~~~~a~~l~~~l~~~~~~~--p---~~v~f~~~~~~~~~~~~~~~~~~ 437 (506)
+ ...+...++...++. +.+.+.+++..+..+.+.+.|++++++. | +.+.+++...
T Consensus 264 ~------~~~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p~~g~f~~~~l~~~------------- 324 (374)
T PRK02610 264 N------LPSFSQLAAQLALEHRQELLAAIPEILQERDRLYQALQELPQLRVWPSAANFLYLRLSQD------------- 324 (374)
T ss_pred C------CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEeCCCcceEEEEeCCCC-------------
Confidence 0 011222223333322 3444455555666777888888877776 5 4444444321
Q ss_pred HHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 048643 438 EAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAF 498 (506)
Q Consensus 438 ~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l 498 (506)
....++.+.+.+.|+.+ .+ ...++|+++.. .++++++++.|+++.+.+
T Consensus 325 ----~~~~~~~~~l~~~gi~v-~~----~~~~lRls~~~----~~~~~~~l~~l~~~l~~~ 372 (374)
T PRK02610 325 ----AALAALHQALKAQGTLV-RH----TGGGLRITIGT----PEENQRTLERLQAALTQL 372 (374)
T ss_pred ----CCHHHHHHHHHHCCEEE-Ee----CCCeEEEeCCC----HHHHHHHHHHHHHHHhhc
Confidence 01245666677778743 32 23589999853 457899998888876543
No 240
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.66 E-value=4.1e-14 Score=131.84 Aligned_cols=292 Identities=11% Similarity=0.070 Sum_probs=196.5
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHH
Q 048643 131 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQI 210 (506)
Q Consensus 131 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~ 210 (506)
..+.+.+...++++.|-+ ..++.+++-.||..++.+... +++.|+..+..|.|+....++
T Consensus 111 q~iHk~LE~kiAqfh~rE---------D~ilypscfdANag~feail~-----------pedAvfSDeLNhASIIdGirL 170 (417)
T KOG1359|consen 111 QDIHKLLESKIAQFHGRE---------DTILYPSCFDANAGAFEAILT-----------PEDAVFSDELNHASIIDGIRL 170 (417)
T ss_pred hHHHHHHHHHHHHHhCCC---------ceEEeccccccchHHHHHhcC-----------hhhhhhccccccchhhhhhHH
Confidence 455566667788887765 457888888888766655543 677788888999999999887
Q ss_pred hCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeeccccc
Q 048643 211 VGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAG 290 (506)
Q Consensus 211 ~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg 290 (506)
+.- -+..|+-.|+..+.+.-+. +-.+|+.....++.|.|.|+++|.+++++||+.+.+|.||+-
T Consensus 171 ckr--------------y~h~dv~~l~~~l~~a~k~--r~klv~TDg~FSMDGdiaPl~ei~~La~kYgaLlfiDecHaT 234 (417)
T KOG1359|consen 171 CKR--------------YRHVDVFDLEHCLISACKM--RLKLVVTDGVFSMDGDIAPLEEISQLAKKYGALLFIDECHAT 234 (417)
T ss_pred Hhh--------------hccchhHHHHHHHHHhhhh--eEEEEEecceeccCCCcccHHHHHHHHHhcCcEEEEeecccc
Confidence 652 2377888898888765331 233555556688999999999999999999999999999987
Q ss_pred ccccCc--cchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhh-cCCccccCCccccCCCccCCCCccccC
Q 048643 291 SACICP--EFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSL-STNPEYLKNKATESKQVVDYKDWQITL 367 (506)
Q Consensus 291 ~~~~~~--~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~-~~~~~yl~~~~~~~~~~~~~~~~~~~~ 367 (506)
+++--. ...+.+.-...+|.+.....|.++... |.+. .-+..+.+.+ +...+|++...- ..
T Consensus 235 gf~G~tGrGt~E~~~vm~~vdiinsTLgKAlGga~--GGyt-tgp~~li~llrqr~RpylFSnsl-------------pp 298 (417)
T KOG1359|consen 235 GFFGETGRGTAEEFGVMGDVDIINSTLGKALGGAS--GGYT-TGPKPLISLLRQRSRPYLFSNSL-------------PP 298 (417)
T ss_pred eeecCCCCChHHHhCCCCcceehhhhhhhhhcCCC--CCCc-cCChhHHHHHHhcCCceeecCCC-------------Ch
Confidence 665321 112223224579999999999887432 2222 2233333344 445578875421 11
Q ss_pred CCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc-c----ceEEEeecCCCcccccccccchHHHHHH
Q 048643 368 SRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS-P----SAVMDKLKPKYENCHSQQLVTEEEAINE 442 (506)
Q Consensus 368 sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~-p----~~v~f~~~~~~~~~~~~~~~~~~~~~~~ 442 (506)
+--..+.+++..+.. -.+.+.+...+.++|++..+.. ||. . ++....+.. .+
T Consensus 299 avV~~a~ka~dllm~-----s~~~i~~~~a~~qrfr~~me~a-GftIsg~~hPI~pv~lGd-----------------a~ 355 (417)
T KOG1359|consen 299 AVVGMAAKAYDLLMV-----SSKEIQSRQANTQRFREFMEAA-GFTISGASHPICPVMLGD-----------------AR 355 (417)
T ss_pred hhhhhhHHHHHHHHh-----hHHHHHHHHHHHHHHHHHHHhc-CceecCCCCCccceeccc-----------------HH
Confidence 111123444444332 2345666777888999988876 787 1 444444432 35
Q ss_pred HHHHHHHHHHhcCcEEEe---eeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 048643 443 FNRELLESINASGKAYMT---HAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAF 498 (506)
Q Consensus 443 ~~~~l~~~l~~~g~~~~~---~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l 498 (506)
+..++.+.|.++|+..++ |+++.|+..+|+.+...| |+||||++++++.++++.+
T Consensus 356 lA~~~ad~lLk~Gi~Vigfs~PvVP~gkariRVqiSAaH-t~edid~~i~Af~~vgr~~ 413 (417)
T KOG1359|consen 356 LASKMADELLKRGIYVIGFSYPVVPKGKARIRVQISAAH-TEEDIDRLIEAFSEVGRFL 413 (417)
T ss_pred HHHHHHHHHHhcCceEEeecCCcCCCCceEEEEEEehhc-CHHHHHHHHHHHHHHHHhh
Confidence 567788889999986543 445678899999996544 5569999999999988754
No 241
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.66 E-value=2.5e-14 Score=148.33 Aligned_cols=237 Identities=14% Similarity=0.170 Sum_probs=152.1
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchH--
Q 048643 126 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCA-- 203 (506)
Q Consensus 126 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s-- 203 (506)
..|...++| +.+++++|.+ ..+++++|+.|+..++.+... ++..|+++...|..
T Consensus 55 ~~p~~~~le----~~lA~l~g~~---------~~v~~~sG~~Ai~~al~~l~~-----------~Gd~Vl~~~~~y~~t~ 110 (418)
T TIGR01326 55 MNPTTDVLE----QRIAALEGGV---------AALAVASGQAAITYAILNLAQ-----------AGDNIVSSSYLYGGTY 110 (418)
T ss_pred CChhHHHHH----HHHHHHhCCC---------eEEEEccHHHHHHHHHHHHhC-----------CCCEEEEECCCcHHHH
Confidence 445555555 5578888864 468999999999888776543 44566777776643
Q ss_pred --HHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCE
Q 048643 204 --LQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIW 281 (506)
Q Consensus 204 --~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~ 281 (506)
+.+.+...|+ +++.++.+ |+++|++++++.+ .+|++..++|++|.+.|+++|+++|+++|++
T Consensus 111 ~~~~~~~~~~G~---~v~~v~~~-------d~~~l~~~l~~~t------~~V~le~p~NPtg~v~dl~~I~~la~~~~i~ 174 (418)
T TIGR01326 111 NLFKHTLKRLGI---EVRFVDPD-------DPEEFEKAIDENT------KAVFAETIGNPAINVPDIEAIAEVAHAHGVP 174 (418)
T ss_pred HHHHHHHHHcCc---EEEEECCC-------CHHHHHHhcCcCC------eEEEEECCCCCCCeecCHHHHHHHHHHcCCE
Confidence 3455677888 88888742 7899999886543 3778888999999999999999999999999
Q ss_pred EEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCC-CcceEEEEeCchhHHhhhcCCccccCCccccCCCc-cC
Q 048643 282 VHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQV-VD 359 (506)
Q Consensus 282 lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~-~~ 359 (506)
++||++|+.+....+ .. .++|.++.+++|+++.+ ...|.+++....... ..... ..+.......... ..
T Consensus 175 livD~t~~~~~~~~~-l~------~g~Divv~S~sK~l~g~G~~lGg~v~~~~~~~~-~~~~~-~~~~~~~~~q~a~~~~ 245 (418)
T TIGR01326 175 LIVDNTFATPYLCRP-ID------HGADIVVHSATKYIGGHGTAIGGVIVDGGKFDW-ANGRF-PLFTTPDPSYHGLVFT 245 (418)
T ss_pred EEEECCCchhhcCCc-hh------cCCeEEEECccccccCCccceEEEEEecccccc-ccccc-ccccCCCCccccchhh
Confidence 999999976533222 11 26899999999999865 336666664432110 00000 0000000000000 00
Q ss_pred C-----------C-CccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc
Q 048643 360 Y-----------K-DWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS 413 (506)
Q Consensus 360 ~-----------~-~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~ 413 (506)
. . .+....+-...+...|..++ |.+.+..++++..+++..+.+.|.+.|++.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~~~~~--~l~tl~~R~~~~~~~a~~la~~L~~~~~V~ 309 (418)
T TIGR01326 246 ETFGNPAFIVKARVQLLRDLGAALSPFNAFLLLQ--GLETLSLRMERHVENALKVAEFLEAHPKVA 309 (418)
T ss_pred hhhchhhHHHHHHHHHHHhcCCCCCHHHHHHHHC--CcccHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 0 0 00000111223456676555 556777888888899999999999888765
No 242
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.66 E-value=2.3e-14 Score=146.02 Aligned_cols=226 Identities=18% Similarity=0.210 Sum_probs=157.3
Q ss_pred cccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCC---
Q 048643 124 WISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQT--- 200 (506)
Q Consensus 124 ~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~--- 200 (506)
....|...++|+. ++++.|.+ ..+.+++|+.|+..++.+... ++..|+++...
T Consensus 60 r~~~P~~~~lE~~----la~leg~~---------~av~~sSG~aAi~~al~all~-----------~GD~Vl~~~~~yg~ 115 (384)
T PRK06434 60 RWGNPTVQAFEEK----YAVLENAE---------HALSFSSGMGAITSAILSLIK-----------KGKRILSISDLYGQ 115 (384)
T ss_pred CCCChhHHHHHHH----HHHHhCCC---------cEEEeCCHHHHHHHHHHHHhC-----------CCCEEEEecCccch
Confidence 3467888888876 67776764 458888888888877765422 55667776553
Q ss_pred -chHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhC
Q 048643 201 -HCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFG 279 (506)
Q Consensus 201 -H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g 279 (506)
+..+.+.+...|+ +++.+++++.+++.+++ ..+.+|+....+++++.+.|+++|+++|++++
T Consensus 116 t~~~~~~~~~~~Gi---~v~fvd~~~~~~~~l~~--------------~~tklv~~e~~snpt~~v~Di~~I~~la~~~~ 178 (384)
T PRK06434 116 TFYFFNKVLKTLGI---HVDYIDTDRLNSLDFDP--------------SNYDLIYAESITNPTLKVPDIKNVSSFCHEND 178 (384)
T ss_pred HHHHHHHHHHhcCc---EEEEECCCChhheeecC--------------CCeeEEEEEcCCCCCceeecHHHHHHHHHHcC
Confidence 2233466777899 99999886433233222 12347888999999999999999999999998
Q ss_pred CEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCc--ceEEEEeCchhHHhhhcCCccccCCccccCCCc
Q 048643 280 IWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLD--CCCLWVKDPSALVSSLSTNPEYLKNKATESKQV 357 (506)
Q Consensus 280 ~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~ 357 (506)
++||++++.....-| .. .++|.++.++||+++.+-+ .|++.+++++...+... +..
T Consensus 179 --lvVD~t~~s~~~~~p-l~------~gaDivv~S~tK~i~G~~d~~gG~vv~~~~~~~~~~~~-----~~~-------- 236 (384)
T PRK06434 179 --VIVDATFASPYNQNP-LD------LGADVVIHSATKYISGHSDVVMGVAGTNNKSIFNNLVE-----RRK-------- 236 (384)
T ss_pred --eEEECCCCCcccCCc-hh------cCCCEEEeecccccCCCCCceEEEEecCcHHHHHHHHH-----HHH--------
Confidence 567999976543222 11 2799999999999998765 67776766543222110 000
Q ss_pred cCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc----c-------------ceEEEe
Q 048643 358 VDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS----P-------------SAVMDK 420 (506)
Q Consensus 358 ~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~----p-------------~~v~f~ 420 (506)
..+.....+.+|+.++ |.+.+..++++..++|..+.+.|+++|.++ | ++++|.
T Consensus 237 --------~~G~~~~~~~A~l~~~--gL~tL~~R~~r~~~~a~~~a~~L~~~p~v~~V~yPgl~~~~~~~~g~g~~~sf~ 306 (384)
T PRK06434 237 --------TLGSNPDPIQAYLALR--GLKTLGLRMEKHNKNGMELARFLRDSKKISNVYYPDTEIGKKVLRGFGGMLSFE 306 (384)
T ss_pred --------hcCCCCCHHHHHHHHh--CCCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECCChHHHHHhcCCCCceEEEE
Confidence 0112224566676666 668899999999999999999999998876 3 578888
Q ss_pred ec
Q 048643 421 LK 422 (506)
Q Consensus 421 ~~ 422 (506)
+.
T Consensus 307 l~ 308 (384)
T PRK06434 307 LR 308 (384)
T ss_pred EC
Confidence 75
No 243
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.65 E-value=3e-14 Score=137.38 Aligned_cols=305 Identities=16% Similarity=0.209 Sum_probs=191.9
Q ss_pred ccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCC---
Q 048643 123 NWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQ--- 199 (506)
Q Consensus 123 ~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~--- 199 (506)
+....|-...+|+.+ +.|=| . -.++.+++|..|..+|+..... .++.|+.+..
T Consensus 57 sRi~NPT~~vlE~Ri----AaLEG---G------~aa~a~aSG~AA~~~ai~~la~-----------aGD~iVss~~LYG 112 (426)
T COG2873 57 TRIMNPTTDVLEERI----AALEG---G------VAALAVASGQAAITYAILNLAG-----------AGDNIVSSSKLYG 112 (426)
T ss_pred eeccCchHHHHHHHH----HHhhc---c------hhhhhhccchHHHHHHHHHhcc-----------CCCeeEeeccccC
Confidence 345678788888764 44422 1 1457778888888888776443 3444444433
Q ss_pred -CchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHh
Q 048643 200 -THCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQF 278 (506)
Q Consensus 200 -~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~ 278 (506)
++.-+....+.+|+ +++.|+.+ |++.++++|+++++ +|.+..-.|+-+.|-|+++|+++||++
T Consensus 113 GT~~lf~~tl~~~Gi---~v~fvd~~-------d~~~~~~aI~~nTk------avf~EtigNP~~~v~Die~ia~iAh~~ 176 (426)
T COG2873 113 GTYNLFSHTLKRLGI---EVRFVDPD-------DPENFEAAIDENTK------AVFAETIGNPGLDVLDIEAIAEIAHRH 176 (426)
T ss_pred chHHHHHHHHHhcCc---EEEEeCCC-------CHHHHHHHhCcccc------eEEEEeccCCCccccCHHHHHHHHHHc
Confidence 23345556788999 99999743 79999999999987 688877788999999999999999999
Q ss_pred CCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCC-CcceEEEEeCc-hhHHhhhcCCccccCCccccCCC
Q 048643 279 GIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDP-SALVSSLSTNPEYLKNKATESKQ 356 (506)
Q Consensus 279 g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p-~~~g~~~~r~~-~~l~~~~~~~~~yl~~~~~~~~~ 356 (506)
|+.++||..++..+++-| .++ +||.|+-+..||++.. -..|.+++-.. -... . +..-+.+.... ++..
T Consensus 177 gvpliVDNT~atpyl~rP-~~h------GADIVvHS~TK~igGhGt~iGG~iVD~G~FDw~-~-~~rfP~~~~p~-p~Yh 246 (426)
T COG2873 177 GVPLIVDNTFATPYLCRP-IEH------GADIVVHSATKYIGGHGTAIGGVIVDGGKFDWT-A-NGRFPEFTTPD-PSYH 246 (426)
T ss_pred CCcEEEecCCCcceecch-hhc------CCCEEEEeecccccCCccccceEEEeCCccccc-c-CCCCcccCCCC-cccc
Confidence 999999999988855443 333 8999999999999743 33444554322 1111 0 11111121111 0000
Q ss_pred ccCCCC-cc---------cc----CCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc---------
Q 048643 357 VVDYKD-WQ---------IT----LSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS--------- 413 (506)
Q Consensus 357 ~~~~~~-~~---------~~----~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~--------- 413 (506)
...+.+ ++ .+ .+....+...|..++ |.|-+.-+++|++++|..+++.|+++|.+.
T Consensus 247 Gl~~~~~~g~~af~~~~r~~~lRDlGa~lsPfnAfl~lq--GlETL~LRmerH~~NA~~vA~~L~~HpkV~~V~YpgL~~ 324 (426)
T COG2873 247 GLVYTETFGNAAFIIKARVQLLRDLGATLSPFNAFLLLQ--GLETLSLRMERHCENALKVAEFLENHPKVAWVNYPGLAS 324 (426)
T ss_pred ceehhhhcccHHHHHHHHHHHHHhcccccCcHHHHHHHh--chhhhHHHHHHHHHhHHHHHHHHhcCCCeeeeecCCCCC
Confidence 011111 00 01 122233456666665 778899999999999999999999988765
Q ss_pred -----------c----ceEEEeecCCCcccccccccchHHHHHHHHH--HHHHHHHhcCc---EEEee--eeEC------
Q 048643 414 -----------P----SAVMDKLKPKYENCHSQQLVTEEEAINEFNR--ELLESINASGK---AYMTH--AVCG------ 465 (506)
Q Consensus 414 -----------p----~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~~~l~~~g~---~~~~~--~~~~------ 465 (506)
| .+++|.+++. .+....+.. +|...+..-|- ..+.| |++.
T Consensus 325 ~~~h~la~kyl~~g~g~vltF~~kgg------------~ea~~~fi~~l~L~s~laNvGD~rsLvIHPAsTTH~ql~~ee 392 (426)
T COG2873 325 HPYHALAKKYLPKGAGAVLTFGVKGG------------YEAGKKFIDALKLFSHLANIGDARSLVIHPASTTHRQLSEEE 392 (426)
T ss_pred CcchhHHHhhccCCCceEEEEEecCh------------HHHHHHHHHHHHHHHhhccccccceeEecCcccchhcCCHHH
Confidence 2 7788887664 111122211 22222222222 23333 2211
Q ss_pred ------CEEEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 048643 466 ------GIYAMRFAVGATLTEERHVMVAWTMVQEQLE 496 (506)
Q Consensus 466 ------g~~~lR~~~~~~~tt~edi~~li~~l~~~~~ 496 (506)
....+|+|+. -||++.++..|++..+
T Consensus 393 ~~~aGv~~~~IRlSVG-----IEd~~DiiaDl~qAl~ 424 (426)
T COG2873 393 QAAAGVTPDLIRLSVG-----IEDIDDIIADLEQALE 424 (426)
T ss_pred HHhcCCCCCcEEEEec-----cCCHHHHHHHHHHHHh
Confidence 3578999994 3488888888887654
No 244
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.65 E-value=7.1e-16 Score=150.90 Aligned_cols=242 Identities=16% Similarity=0.148 Sum_probs=157.5
Q ss_pred cCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEe
Q 048643 117 FNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYG 196 (506)
Q Consensus 117 ~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~ 196 (506)
.|.....|..+|...++|+. +++++|.+. .+|+.+||+||..++.+... +...|++
T Consensus 18 a~~gd~~Yg~D~~~~~l~~~----i~~l~g~e~---------a~f~~sGT~An~~al~~~~~-----------~~~~vi~ 73 (290)
T PF01212_consen 18 ANVGDDAYGEDPTTARLEER----IAELFGKEA---------ALFVPSGTMANQLALRAHLR-----------PGESVIC 73 (290)
T ss_dssp TTSB-CCTTSSHHHHHHHHH----HHHHHTSSE---------EEEESSHHHHHHHHHHHHHH-----------TTEEEEE
T ss_pred cccCCcccCCChhHHHHHHH----HHHHcCCCE---------EEEeCCCChHHHHHHHHHHh-----------cCCceec
Confidence 33333468888888877755 778888874 47899999999999988763 6677889
Q ss_pred CCCCchHHHHHH---HHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCC-Ccc---cChh
Q 048643 197 SDQTHCALQKAA---QIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAI-TAV---DPLK 269 (506)
Q Consensus 197 s~~~H~s~~ka~---~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~t-G~i---dpl~ 269 (506)
...+|..+.+.. .+.|. +++.|+.+. +|.+|+++|++.+++.......|.+|+++..++.. |.+ +.|+
T Consensus 74 ~~~aHi~~~E~ga~~~~~G~---~~~~l~~~~--~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ 148 (290)
T PF01212_consen 74 ADTAHIHFDETGAIEELSGA---KLIPLPSDD--DGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELR 148 (290)
T ss_dssp ETTEHHHHSSTTHHHHHTTC---EEEEEBECT--GTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHH
T ss_pred cccceeeeeccchhhHhcCc---EEEECCCcc--cCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHH
Confidence 999998777532 45788 899998763 37999999999998854422346677777766554 665 5678
Q ss_pred HHHHHHHHhCCEEEeeccccccccc--CccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCcccc
Q 048643 270 PLCDVAKQFGIWVHVDAAYAGSACI--CPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYL 347 (506)
Q Consensus 270 ~I~~ia~~~g~~lhVDaA~gg~~~~--~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl 347 (506)
+|.++|++||+.+|+|||.-+.... ....++.. ..+|++++++.|.+++|. |.+++-+++.+.+.+.. ..++
T Consensus 149 ai~~~a~~~gl~lhmDGARl~~a~~~~~~~~~e~~---~~~D~v~~~~tK~~g~~~--Gavl~~~~~~i~~~~~~-~k~~ 222 (290)
T PF01212_consen 149 AISELAREHGLPLHMDGARLANAAAALGVSLAEIA---AGADSVSFGGTKNGGAPG--GAVLAGNKEFIAKARRQ-RKRL 222 (290)
T ss_dssp HHHHHHHHHT-EEEEEETTHHHHHCHHHHHHHHHH---TTSSEEEEETTSTT-SSS--EEEEEESHHHHHHHHHH-HHHH
T ss_pred HHHHHHHhCceEEEEehhhHHHhhhcccccHHHHh---hhCCEEEEEEEccccccc--ceEEEechHHHHHHHHH-HHHh
Confidence 8889999999999999986443331 11233443 489999999999999885 34444444433322211 0111
Q ss_pred CCccccCCCccCCCCccccCCCCCCchHH---HHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCC
Q 048643 348 KNKATESKQVVDYKDWQITLSRRFRSLKL---WLVIRNYGVANLRHFLRSHVNMAKLFERLVASDK 410 (506)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~sr~~~al~~---~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~ 410 (506)
... + |....+.+ +......+.+.....+.+..++|++|.+.|+..+
T Consensus 223 gg~--------------~---~~~G~~~a~~~~~~~~l~~l~~~~~~~~~~~~~A~~La~~l~~~~ 271 (290)
T PF01212_consen 223 GGG--------------M---RQAGVLAAAELYQFAALRALELWLERARHANAMAKRLAAGLEALG 271 (290)
T ss_dssp THH--------------H---HHTTHHHHHHHHHHHHHCHEECSHHHHHCHHHHHHCHHHCHHEEC
T ss_pred ccC--------------e---eecceeeeechhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHCC
Confidence 100 0 00011111 1111222334446777888999999999999884
No 245
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.65 E-value=1.7e-13 Score=141.62 Aligned_cols=289 Identities=13% Similarity=0.085 Sum_probs=173.0
Q ss_pred HHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhC
Q 048643 133 LENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVG 212 (506)
Q Consensus 133 lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G 212 (506)
...++.+.|+++.+.+ ..+++++||+||..||.+||.......|....++.+|.+....|-+..-+..+.+
T Consensus 83 ~~~~l~~~l~~~~~~~---------~~~~~~SGseA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~ 153 (396)
T PRK04073 83 QLGPWYEKVAKLTGKD---------MVLPMNTGAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSS 153 (396)
T ss_pred HHHHHHHHHHhcCCCC---------eEEEcCChHHHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcC
Confidence 3344456677766542 5688999999999999999875322111110123455666667766665555544
Q ss_pred CCC---------CCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC----hhHHHHHHHHhC
Q 048643 213 IDL---------KNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP----LKPLCDVAKQFG 279 (506)
Q Consensus 213 ~g~---------~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp----l~~I~~ia~~~g 279 (506)
-.. ..+..+|. -|+++|++++.+. +.+|+++...+++|.+-| +++|.++|++||
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~i~~~------~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g 220 (396)
T PRK04073 154 EEEYKRGFGPMLPGIKKIPY-------GDLEALKAAITPN------TAAFLVEPIQGEAGINIPPEGFLKAARELCKEEN 220 (396)
T ss_pred CcccccCCCCCCCCceEeCC-------CCHHHHHHhcccC------eEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcC
Confidence 210 01233332 2788998888643 347888888899998855 899999999999
Q ss_pred CEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCC-CcceEEEEeCchhHHhhhcCCccccCCccccCCCcc
Q 048643 280 IWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVV 358 (506)
Q Consensus 280 ~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~ 358 (506)
+++++|++|.++......+.....++ ..|.+++ .|.++.+ +..|+++.+++ +.+.+.... .
T Consensus 221 ~lli~DEv~~g~g~~g~~~~~~~~~~-~pdi~~~--sK~lg~gg~~ig~~~~~~~--i~~~~~~~~----~--------- 282 (396)
T PRK04073 221 VLFIADEIQTGLGRTGKLFACDWDNV-TPDMYIL--GKALGGGVFPISCVAANRD--ILGVFTPGS----H--------- 282 (396)
T ss_pred CEEEEecchhCCCcCcHHHHhhhcCC-CCCEEEe--cccccCCCCcceEEEEcHH--HHhhhcCCC----C---------
Confidence 99999999986432111011011222 4676665 5998876 67888876532 222332100 0
Q ss_pred CCCCccccCCCCCCchHHH---HHHHHhchhHHHHHHHHHHHHHHHHHHHHHcC--CCCc---c--ceEEEeecCCCccc
Q 048643 359 DYKDWQITLSRRFRSLKLW---LVIRNYGVANLRHFLRSHVNMAKLFERLVASD--KRVS---P--SAVMDKLKPKYENC 428 (506)
Q Consensus 359 ~~~~~~~~~sr~~~al~~~---~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~--~~~~---p--~~v~f~~~~~~~~~ 428 (506)
.. +. ++ ..+... .+|+.+-.+ .+.++..++.++|.+.|+++ +.+. + .++.+.+...
T Consensus 283 -~~--t~-~~---~~~~~aaa~aaL~~~~~~---~l~~~~~~~~~~l~~~L~~l~~~~i~~~~~~g~~~~~~~~~~---- 348 (396)
T PRK04073 283 -GS--TF-GG---NPLACAVSIAALEVLEEE---KLPERSLELGEYFKEQLKEIDNPMIKEVRGRGLFIGVELNEP---- 348 (396)
T ss_pred -CC--CC-CC---CHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHhhcCCcccceecceEEEEEEecch----
Confidence 00 10 11 223333 334333233 34466677899999999875 2233 2 4444444221
Q ss_pred ccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 048643 429 HSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQL 495 (506)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~ 495 (506)
...+.++|.+.|++ +.+ .+..++|++. +...++++|+++++.|+++.
T Consensus 349 ---------------~~~~~~~l~~~Gv~-~~~---~~~~~iRi~p-~l~~t~e~i~~~~~~l~~~l 395 (396)
T PRK04073 349 ---------------ARPYCEALKEEGLL-CKE---THETVIRFAP-PLVITKEELDWAFEKIKAVL 395 (396)
T ss_pred ---------------HHHHHHHHHHCCeE-Eec---CCCCEEEEEC-CcccCHHHHHHHHHHHHHHh
Confidence 24566777778864 433 2346899997 45668889999999998763
No 246
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.65 E-value=3.1e-14 Score=145.91 Aligned_cols=299 Identities=12% Similarity=0.088 Sum_probs=180.6
Q ss_pred HHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCC
Q 048643 134 ENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGI 213 (506)
Q Consensus 134 E~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~ 213 (506)
.+++.+++++.+|.+ ..++++||+.|+..++.++.-. ++..|+++..+|.+...++...|+
T Consensus 33 ~~~~e~~la~~~g~~---------~~v~~~sgt~al~~~l~~~~~~----------~Gd~Viv~~~t~~~~~~~~~~~G~ 93 (375)
T PRK11706 33 TRRCQQWLEQRFGSA---------KVLLTPSCTAALEMAALLLDIQ----------PGDEVIMPSYTFVSTANAFVLRGA 93 (375)
T ss_pred HHHHHHHHHHHhCCC---------eEEEECCHHHHHHHHHHHhCCC----------CCCEEEECCCCcHHHHHHHHHcCC
Confidence 344446678877774 5688999998876665543111 567899999999999999999999
Q ss_pred CCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecccccccc
Q 048643 214 DLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSAC 293 (506)
Q Consensus 214 g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~ 293 (506)
+++.++++++ ++.+|+++|++++++.+ .+|+.+ +++|...++++|.++|++||+++++|+||+.+..
T Consensus 94 ---~~v~~d~d~~-~~~~d~~~le~~i~~~t------k~i~~~---~~~G~~~~~~~i~~la~~~~i~vIeD~a~a~g~~ 160 (375)
T PRK11706 94 ---KIVFVDIRPD-TMNIDETLIEAAITPKT------RAIVPV---HYAGVACEMDTIMALAKKHNLFVVEDAAQGVMST 160 (375)
T ss_pred ---EEEEEecCCC-cCCcCHHHHHHhcCCCC------eEEEEe---CCCCCccCHHHHHHHHHHcCCEEEEECccccccc
Confidence 9999999864 47899999999986533 255554 3589999999999999999999999999976653
Q ss_pred cCccchhhhcCCCCCCeeEEcCc--cccCCCCcceEEEEeCchhHHhh--hcC---CccccCCccccCCCccCCCCcccc
Q 048643 294 ICPEFQHFIDGVEGADSFSLNAH--KWFFTTLDCCCLWVKDPSALVSS--LST---NPEYLKNKATESKQVVDYKDWQIT 366 (506)
Q Consensus 294 ~~~~~~~~~~gi~~aDsi~~~~h--K~l~~p~~~g~~~~r~~~~l~~~--~~~---~~~yl~~~~~~~~~~~~~~~~~~~ 366 (506)
.... . +.. ..|.-++++| |.+.++ ..|++++.++....+. +.. ........ ......+ ..
T Consensus 161 ~~~~--~-~g~--~~~~~~~Sf~~~K~l~~g-~gG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~------~~~~~~~-~~ 227 (375)
T PRK11706 161 YKGR--A-LGT--IGHIGCFSFHETKNYTAG-EGGALLINDPALIERAEIIREKGTNRSQFFRG------QVDKYTW-VD 227 (375)
T ss_pred cCCe--e-eec--CcCEEEEeCCCCcccccc-CCeEEEECCHHHHHHHHHHHHcCCCcchhhcc------CCCccee-ee
Confidence 2211 1 111 2354555555 988663 3455666665433211 111 00000000 0000000 01
Q ss_pred CCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCC---CCc----c-------ceEEEeecCCCccccccc
Q 048643 367 LSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDK---RVS----P-------SAVMDKLKPKYENCHSQQ 432 (506)
Q Consensus 367 ~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~---~~~----p-------~~v~f~~~~~~~~~~~~~ 432 (506)
.+..++.-.+-+++-....+.+.+..++..++++++.+.|...+ .+. | ..+.+++.+.
T Consensus 228 ~g~~~~~~~~~aa~~~~ql~~l~~~~~~R~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 299 (375)
T PRK11706 228 IGSSYLPSELQAAYLWAQLEAADRINQRRLALWQRYYDALAPLAEAGRIELPSIPDDCKHNAHMFYIKLRDL-------- 299 (375)
T ss_pred cccccCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCeeecCCCCCCCceeeEEEEEEECCc--------
Confidence 12222221222233222235578888888999999999998875 233 1 1233333221
Q ss_pred ccchHHHHHHHHHHHHHHHHhcCcEEEe---eeeE----------C---------CEEEEEEEecCCCCCHHHHHHHHHH
Q 048643 433 LVTEEEAINEFNRELLESINASGKAYMT---HAVC----------G---------GIYAMRFAVGATLTEERHVMVAWTM 490 (506)
Q Consensus 433 ~~~~~~~~~~~~~~l~~~l~~~g~~~~~---~~~~----------~---------g~~~lR~~~~~~~tt~edi~~li~~ 490 (506)
....++.+.|.++|+.... +..+ . ....+-+- +++..+++|++.+++.
T Consensus 300 ---------~~r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP-~~~~l~~~~~~~i~~~ 369 (375)
T PRK11706 300 ---------EDRSALINFLKEAGIMAVFHYIPLHSSPAGERFGRFHGEDRYTTKESERLLRLP-LFYNLTDVEQRTVIDT 369 (375)
T ss_pred ---------CCHHHHHHHHHHCCCCccccCCccCcchhhHhcCCCCCCChHHHHHHhCcEecc-CCCCCCHHHHHHHHHH
Confidence 1134666777777763110 1000 0 12234443 4677888999999999
Q ss_pred HHHHH
Q 048643 491 VQEQL 495 (506)
Q Consensus 491 l~~~~ 495 (506)
|++..
T Consensus 370 i~~~~ 374 (375)
T PRK11706 370 ILEFF 374 (375)
T ss_pred HHHHh
Confidence 98763
No 247
>PRK07505 hypothetical protein; Provisional
Probab=99.65 E-value=2.8e-13 Score=140.27 Aligned_cols=296 Identities=11% Similarity=0.079 Sum_probs=172.5
Q ss_pred hHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHH
Q 048643 130 ATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQ 209 (506)
Q Consensus 130 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~ 209 (506)
..+...++.+.+++++|. . .+++++|++|+..++..++..... +.++.+|+.+...|.|+.....
T Consensus 89 ~~~~~~~l~~~la~~~~~-~---------~~~~~sG~~a~~~ai~~~~~~~~~-----~~~~~vi~~~~~~H~s~~~~~~ 153 (402)
T PRK07505 89 RSQILKDLEEALSELFGA-S---------VLTFTSCSAAHLGILPLLASGHLT-----GGVPPHMVFDKNAHASLNILKG 153 (402)
T ss_pred hhHHHHHHHHHHHHHhCC-C---------EEEECChHHHHHHHHHHHHhcccC-----CCCCCEEEEchhhhHhHHhhhh
Confidence 355666777889999886 2 255556788998888776542111 1133466777789988753222
Q ss_pred H--hCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecc
Q 048643 210 I--VGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAA 287 (506)
Q Consensus 210 ~--~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA 287 (506)
. .+. +++.+|. .|+++|++++++.+ .+++++.+.+++|.+.|+++|.++|++||+++++|++
T Consensus 154 ~~~~~~---~v~~~~~-------~d~~~l~~~~~~~~------~~~vl~~p~~~~G~~~~~~~i~~l~~~~~~~li~DEa 217 (402)
T PRK07505 154 ICADET---EVETIDH-------NDLDALEDICKTNK------TVAYVADGVYSMGGIAPVKELLRLQEKYGLFLYIDDA 217 (402)
T ss_pred hhhcCC---eEEEeCC-------CCHHHHHHHHhcCC------CEEEEEecccccCCcCCHHHHHHHHHHcCCEEEEECc
Confidence 2 233 6777774 38899998886432 3677788889999999999999999999999999999
Q ss_pred cccccc--cCccchhhhcCC--CCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcC-CccccCCccccCCCccCCCC
Q 048643 288 YAGSAC--ICPEFQHFIDGV--EGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLST-NPEYLKNKATESKQVVDYKD 362 (506)
Q Consensus 288 ~gg~~~--~~~~~~~~~~gi--~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~ 362 (506)
|+...+ ....+.....+. .....++.++-|.++.+ .|++++.++... +.+.. ..+|.
T Consensus 218 ~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~--Gg~~~~~~~~~~-~~~~~~~~~~t--------------- 279 (402)
T PRK07505 218 HGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGAS--GGVIMLGDAEQI-ELILRYAGPLA--------------- 279 (402)
T ss_pred ccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhcc--CeEEEeCCHHHH-HHHHHhCCCce---------------
Confidence 843211 111111111121 12234455788988765 366555554433 33321 11121
Q ss_pred ccccCCCC-CCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc-c--ceEEEeecCCCcccccccccchHH
Q 048643 363 WQITLSRR-FRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS-P--SAVMDKLKPKYENCHSQQLVTEEE 438 (506)
Q Consensus 363 ~~~~~sr~-~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~-p--~~v~f~~~~~~~~~~~~~~~~~~~ 438 (506)
...+.. .....+..++..+..+.+.++.++..++.+.+...+... .. + .+..+.. +.
T Consensus 280 --~~~~~~~~a~aa~~a~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~--~~g~~~~i~~~~~-~~-------------- 340 (402)
T PRK07505 280 --FSQSLNVAALGAILASAEIHLSEELDQLQQKLQNNIALFDSLIPTE--QSGSFLPIRLIYI-GD-------------- 340 (402)
T ss_pred --eCCCCCHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHhc--CCCCCCCEEEEEe-CC--------------
Confidence 111211 122233444554455555555555555555444333221 11 1 2222222 11
Q ss_pred HHHHHHHHHHHHHHhcCcEEEeeeeE----CCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 048643 439 AINEFNRELLESINASGKAYMTHAVC----GGIYAMRFAVGATLTEERHVMVAWTMVQEQLEA 497 (506)
Q Consensus 439 ~~~~~~~~l~~~l~~~g~~~~~~~~~----~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~ 497 (506)
.....++.++|.++|++. .+... .+..++|+++. ...++++++++++.|+++.++
T Consensus 341 --~~~~~~~~~~l~~~Gi~v-~~~~~p~~~~~~~~lRi~~~-~~~t~eei~~~~~~l~~~l~~ 399 (402)
T PRK07505 341 --EDTAIKAAKQLLDRGFYT-SPVFFPVVAKGRAGLRIMFR-ASHTNDEIKRLCSLLKEILDE 399 (402)
T ss_pred --HHHHHHHHHHHHHCCCeE-eeecCCCCCCCCceEEEecC-ccCCHHHHHHHHHHHHHHHHh
Confidence 112456778888888754 33221 23468999984 567888999999999988654
No 248
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.64 E-value=1.6e-13 Score=140.06 Aligned_cols=284 Identities=10% Similarity=0.017 Sum_probs=179.8
Q ss_pred HHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCC-eEEEeCCCCchHHHHHHHHhCCC
Q 048643 136 IVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISK-LVVYGSDQTHCALQKAAQIVGID 214 (506)
Q Consensus 136 ~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~-~~v~~s~~~H~s~~ka~~~~G~g 214 (506)
.+++.+++.+|++.+ ..++|+|+++++..++.+... ++ ..|+++...+..+...++..|.
T Consensus 63 ~lr~~ia~~~~~~~~-------~I~~t~G~~~~l~~~~~~~~~-----------~g~~~vlv~~p~y~~~~~~~~~~g~- 123 (364)
T PRK04781 63 GLRSALAALYGCAPE-------QLLIGRGSDEAIDLLVRALCV-----------PGRDAVLVTPPVFGMYAVCARLQNA- 123 (364)
T ss_pred HHHHHHHHHhCcChH-------HEEEeCCHHHHHHHHHHHhcC-----------CCCCeEEEcCCChHHHHHHHHHcCC-
Confidence 344556666787654 788999988887666554322 33 5677887777777777888999
Q ss_pred CCCeEEEecCC-CCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHH--hCCEEEeecccccc
Q 048643 215 LKNFRAIKTTK-SSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQ--FGIWVHVDAAYAGS 291 (506)
Q Consensus 215 ~~~v~~v~~~~-~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~--~g~~lhVDaA~gg~ 291 (506)
+++.||.+. ++++.+|++++++++... .+.+|+++.++|+||.+-|.+++.++++. +++|+++|++|+.+
T Consensus 124 --~~~~v~~~~~~~~~~~d~~~l~~~~~~~-----~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~~~~iI~Deay~~f 196 (364)
T PRK04781 124 --PLVEVPLVDGADGFHADVPAIVAAALAS-----NAKLVFLCSPSNPAGSAIALDQIERALQALQGKALVVVDEAYGEF 196 (364)
T ss_pred --EEEEEecCCCccCCCcCHHHHHHHHhcc-----CCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCcchhh
Confidence 999999853 234678999886655321 23467778899999999998888888875 47999999999765
Q ss_pred cccCccchhhhcCCCCCCeeEEcCccccC-CCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCccccCCCC
Q 048643 292 ACICPEFQHFIDGVEGADSFSLNAHKWFF-TTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRR 370 (506)
Q Consensus 292 ~~~~~~~~~~~~gi~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~ 370 (506)
.. .+.....+....+ -.+..++.|.++ ...-+|+++.. ++.. +.+....... + .
T Consensus 197 ~~-~~~~~~~~~~~~~-vi~~~SfSK~~gl~GlRvGy~v~~-~~l~-~~l~~~~~~~----------------~--~--- 251 (364)
T PRK04781 197 SD-VPSAVGLLARYDN-LAVLRTLSKAHALAAARIGSLIAN-AELI-AVLRRCQAPY----------------P--V--- 251 (364)
T ss_pred cC-CcchHHHHhhCCC-EEEEecChhhcccccceeeeeeCC-HHHH-HHHHhccCCC----------------C--C---
Confidence 32 1111111111111 144567899998 45778887753 3332 3332111000 0 0
Q ss_pred CCchHHHHHHHHh--c-hhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c---ceEEEeecCCCcccccccccchHHHHH
Q 048643 371 FRSLKLWLVIRNY--G-VANLRHFLRSHVNMAKLFERLVASDKRVS---P---SAVMDKLKPKYENCHSQQLVTEEEAIN 441 (506)
Q Consensus 371 ~~al~~~~~l~~~--G-~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p---~~v~f~~~~~~~~~~~~~~~~~~~~~~ 441 (506)
..+...++...+ | .+...+.+++..+.++.+.+.|++++++. | +.+.+++. .
T Consensus 252 -~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~~g~f~~~~~~-~----------------- 312 (364)
T PRK04781 252 -PTPCAALAEQALSAPALAVTARRVAEVRAERERLHAALAQLPGVRRVYPSQGNFLLVRFD-D----------------- 312 (364)
T ss_pred -CHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCCCcEEEEEcC-C-----------------
Confidence 112222333333 2 23455666677778889999999887764 5 44555442 1
Q ss_pred HHHHHHHHHHHhcCcEEEeeeeE-CCEEEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 048643 442 EFNRELLESINASGKAYMTHAVC-GGIYAMRFAVGATLTEERHVMVAWTMVQEQL 495 (506)
Q Consensus 442 ~~~~~l~~~l~~~g~~~~~~~~~-~g~~~lR~~~~~~~tt~edi~~li~~l~~~~ 495 (506)
..++.+.+.++|+.+..+..+ ....++|+++. +.++.++++++|+++.
T Consensus 313 --~~~~~~~l~~~gI~v~~~~~~~~~~~~~Ris~~----~~~~~~~l~~al~~~~ 361 (364)
T PRK04781 313 --AEAAFQALLAAGVVVRDQRAAPRLSDALRITLG----TPEQNDRVLAALQRTQ 361 (364)
T ss_pred --HHHHHHHHHHCCeEEeeCCCCCCCCCeEEEeCC----CHHHHHHHHHHHHHHH
Confidence 245667777788755444322 22568999985 5679999999998753
No 249
>PRK03321 putative aminotransferase; Provisional
Probab=99.64 E-value=8.4e-14 Score=141.60 Aligned_cols=282 Identities=13% Similarity=0.044 Sum_probs=175.2
Q ss_pred hhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHH
Q 048643 128 PAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKA 207 (506)
Q Consensus 128 p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka 207 (506)
++..++++ .+++++|.+.+ ..++++|+++++..++.+... ++..|+++...+......
T Consensus 57 ~g~~~lr~----~ia~~~~~~~~-------~I~~~~G~~~~l~~~~~~~~~-----------~gd~Vli~~p~y~~~~~~ 114 (352)
T PRK03321 57 MGAVELRA----ALAEHLGVPPE-------HVAVGCGSVALCQQLVQATAG-----------PGDEVIFAWRSFEAYPIL 114 (352)
T ss_pred CcHHHHHH----HHHHHhCcCHH-------HEEECCCHHHHHHHHHHHhcC-----------CCCEEEeCCCCHHHHHHH
Confidence 34445554 45566676543 678887777665544433211 556777787777777778
Q ss_pred HHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHH--hCCEEEee
Q 048643 208 AQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQ--FGIWVHVD 285 (506)
Q Consensus 208 ~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~--~g~~lhVD 285 (506)
++..|. +++.+|.++ ++.+|++.+++++++.+ .+|+++.++++||.+-|.++|.++|++ +++|+++|
T Consensus 115 ~~~~g~---~~~~v~~~~--~~~~~~~~l~~~~~~~~------~~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~ii~D 183 (352)
T PRK03321 115 VQVAGA---TPVQVPLTP--DHTHDLDAMAAAITDRT------RLIFVCNPNNPTGTVVTPAELARFLDAVPADVLVVLD 183 (352)
T ss_pred HHHcCC---EEEEccCCC--CCCCCHHHHHHhhccCC------CEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEe
Confidence 888999 999999874 35899999999886533 367778999999999999999999997 59999999
Q ss_pred cccccccccCccchhhhcCCC-CCCee-EEcCccccCCC-CcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCC
Q 048643 286 AAYAGSACICPEFQHFIDGVE-GADSF-SLNAHKWFFTT-LDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKD 362 (506)
Q Consensus 286 aA~gg~~~~~~~~~~~~~gi~-~aDsi-~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~ 362 (506)
++|+.+..-. .....+..+. .-+.+ ..++.|.++.| ..+|+++.. +.. .+.+... + ..
T Consensus 184 e~y~~~~~~~-~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~-~~~-~~~~~~~--~--~~------------ 244 (352)
T PRK03321 184 EAYVEYVRDD-DVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVGYAVGH-PEV-IAALRKV--A--VP------------ 244 (352)
T ss_pred chHHHhccCc-CCCcHHHHHhhCCCEEEEecchHHhhhHHHhhhhhcCC-HHH-HHHHHHh--c--CC------------
Confidence 9997654311 1101011111 12233 44678998743 557777764 332 2333211 0 00
Q ss_pred ccccCCCCCCchHHHHHHHHh-chhHHHHHHHHHHHHHHHHHHHHHcCCCCc--c---ceEEEeecCCCcccccccccch
Q 048643 363 WQITLSRRFRSLKLWLVIRNY-GVANLRHFLRSHVNMAKLFERLVASDKRVS--P---SAVMDKLKPKYENCHSQQLVTE 436 (506)
Q Consensus 363 ~~~~~sr~~~al~~~~~l~~~-G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~--p---~~v~f~~~~~~~~~~~~~~~~~ 436 (506)
+ ....+...+++..+ ..+.+.+.+++..+..+++.+.|++. ++. | +.+.++....
T Consensus 245 ~------~~s~~~q~~a~~~l~~~~~~~~~~~~~~~~r~~~~~~L~~~-~~~~~~~~g~~i~i~l~~~------------ 305 (352)
T PRK03321 245 F------SVNSLAQAAAIASLAAEDELLERVDAVVAERDRVRAALRAA-GWTVPPSQANFVWLPLGER------------ 305 (352)
T ss_pred C------CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCccCCCCCCEEEEeCCCC------------
Confidence 0 01222223333332 22344555666666677788888876 665 3 4444443211
Q ss_pred HHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 048643 437 EEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQL 495 (506)
Q Consensus 437 ~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~ 495 (506)
..++.+.|.+.|+. +.+ + +..++|++++ +.++.++++++|+++.
T Consensus 306 -------~~~~~~~l~~~gI~-v~~--~-~~~~iRi~~~----~~~~~~~~~~al~~~~ 349 (352)
T PRK03321 306 -------TADFAAAAAEAGVV-VRP--F-AGEGVRVTIG----APEENDAFLRAARAWR 349 (352)
T ss_pred -------HHHHHHHHHHCCEE-EEc--c-CCCcEEEeeC----CHHHHHHHHHHHHHHh
Confidence 24566777777864 443 2 3346999983 6779999999998864
No 250
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.64 E-value=1e-13 Score=151.31 Aligned_cols=358 Identities=11% Similarity=0.045 Sum_probs=223.3
Q ss_pred CChhHHhhhCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcccc------CCCCC-CHHHHHHHHHHhhcCCCCccc
Q 048643 52 VEPGYLRKRLPECAPYNPESMETILQDVQEHIVPGVTHWQSPNYFAY------FPSSG-SIAGFLGEMLSSGFNVVGFNW 124 (506)
Q Consensus 52 ~~p~~l~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~------~~~~~-~~~~~~~~~l~~~~n~~~~~~ 124 (506)
.-|..++..-+.++|+ +.++.++++++++....|.. ...|.|- +|+.. .......+|++++ .+++...
T Consensus 44 ~iP~~ir~~~~l~lp~-~~sE~e~~~~~~~~a~kN~~---~~~fiG~G~y~~~~P~vi~~~i~~~~~~yTaY-TPYQpEi 118 (954)
T PRK12566 44 TVPPAIRLNRPLDLPA-ALDEQAALARLRGYAEQNQV---WTSLIGMGYHGTVTPTVILRNVLENPGWYTAY-TPYQPEI 118 (954)
T ss_pred cCCHHHhcCCCCCCCC-CCCHHHHHHHHHHHHhcCCC---ccccccccccCCcCcHHHHHHHHhCchhhhcC-CCCCchh
Confidence 3467776555667777 67999999999997777654 3456652 22222 1222234567765 4555556
Q ss_pred ccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHH
Q 048643 125 ISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCAL 204 (506)
Q Consensus 125 ~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~ 204 (506)
.++.....+|.+ .++++|.|++.. +..+..++|.+- .|+.+++... +. ++..+++++..|+..
T Consensus 119 sQG~Lqal~e~Q--tmi~~LtGm~va-------NASl~D~atA~a-EA~~ma~~~~-~~------k~~~~~v~~~~hP~~ 181 (954)
T PRK12566 119 AQGRLEALLNFQ--QMTIDLTGLDLA-------NASLLDEATAAA-EAMALAKRVA-KS------KSNRFFVDEHCHPQT 181 (954)
T ss_pred hhHHHHHHHHHH--HHHHHHhCchhh-------hhhhccchhHHH-HHHHHHHHHh-hc------CCCEEEECCCCCHHH
Confidence 678888889988 899999999976 567777777443 3555444321 10 245688999999887
Q ss_pred HHHHHH----hCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCC
Q 048643 205 QKAAQI----VGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGI 280 (506)
Q Consensus 205 ~ka~~~----~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~ 280 (506)
...++. +|+ +++. ++|++.+.++ .+.|+++.++ ..|.|.|+++|++++|+.|.
T Consensus 182 ~~v~~t~~~~~g~---~i~~-------------~~~~~~~~~~------~~~v~vq~P~-~~G~i~d~~~i~~~~h~~ga 238 (954)
T PRK12566 182 LSVLRTRAEGFGF---ELVV-------------DAVDNLAAHA------VFGALLQYPD-THGEIRDLRPLIDQLHGQQA 238 (954)
T ss_pred HHHHHHhhhcCCc---EEEE-------------cchhhcCCCC------EEEEEEECCC-CceEEccHHHHHHHHHHcCC
Confidence 765543 344 4443 2333333222 3456666664 67999999999999999999
Q ss_pred EEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCc-----ceEEEEeCchhHHhhhcCCccccCCccccCC
Q 048643 281 WVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLD-----CCCLWVKDPSALVSSLSTNPEYLKNKATESK 355 (506)
Q Consensus 281 ~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~-----~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~ 355 (506)
.++ +++--....+....... +||.++.+. +-|++|.+ .|++.+|++ +. ...|..+.+...+..
T Consensus 239 l~~-~~~d~laL~ll~~Pge~-----GADI~vG~~-Q~fGvp~~~GGP~ag~~a~~~~--~~---R~~PGRivG~s~D~~ 306 (954)
T PRK12566 239 LAC-VAADLLSLLVLTPPGEL-----GADVVLGST-QRFGVPMGYGGPHAAYFACRDD--YK---RAMPGRIIGVSRDAR 306 (954)
T ss_pred EEE-EEeCHHHHhCCCChhhc-----CCcEEeeCC-CcCCCCCCCCCCCeeeeeehHH--HH---hhCCCCccceeecCC
Confidence 754 55543333333222222 899985554 55555533 777888763 22 334555554433333
Q ss_pred CccCCCCcccc----CCCCCCc----------hHHH--HHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc----c-
Q 048643 356 QVVDYKDWQIT----LSRRFRS----------LKLW--LVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS----P- 414 (506)
Q Consensus 356 ~~~~~~~~~~~----~sr~~~a----------l~~~--~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~----p- 414 (506)
+...+. .++| .-||-.| +++. +++.++|.+|++++.++...+|++|++.|.+ .|++ |
T Consensus 307 G~~a~~-l~LqtREQHIRReKAtSNICT~qaL~A~~a~~Y~~~~Gp~Gl~~ia~~~~~~a~~l~~~l~~-~g~~~~~~~f 384 (954)
T PRK12566 307 GNTALR-MALQTREQHIRREKANSNICTAQVLLANIAGFYAVYHGPEGLKRIAQRVHRLTAILAAGLEA-KGIKRLNRHF 384 (954)
T ss_pred CCeeee-hhhhHHHHHhhhccccchhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHh-cCCccccCCc
Confidence 333332 1222 3355433 2222 2344569999999999999999999999999 5888 3
Q ss_pred -ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHH
Q 048643 415 -SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQ 492 (506)
Q Consensus 415 -~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~ 492 (506)
..+.+++... ..++.++-.+.|+-+-. .+ ...+.+++ ...++++||+.+++.+.
T Consensus 385 F~~~~v~~~~~-------------------~~~~~~~a~~~~~n~r~---~~-~~~~~~s~-de~~~~~~~~~~~~~f~ 439 (954)
T PRK12566 385 FDTLTLEVGGA-------------------QAAIIESAEAARINLRI---LG-RGRLGVSL-DETCDEATVARLFDIFL 439 (954)
T ss_pred cceEEEEccCC-------------------HHHHHHHHHHCCCeeEE---eC-CCeEEEEe-CCCCCHHHHHHHHHHhc
Confidence 5555555211 23455555556663221 12 23578888 57889999999999884
No 251
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.64 E-value=9.6e-14 Score=141.69 Aligned_cols=274 Identities=11% Similarity=0.084 Sum_probs=177.3
Q ss_pred HHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCCCCC
Q 048643 138 MDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGIDLKN 217 (506)
Q Consensus 138 ~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~ 217 (506)
.+.+++.+|++.+ ..++|+|+++++..++.+..+ ++..|+++..++..+...++..|+ +
T Consensus 70 r~aia~~~~~~~~-------~I~vt~Gs~e~i~~~~~~l~~-----------~gd~vlv~~P~y~~~~~~~~~~g~---~ 128 (366)
T PRK01533 70 RQTIANKLHVKME-------QVLCGSGLDEVIQIISRAVLK-----------AGDNIVTAGATFPQYRHHAIIEGC---E 128 (366)
T ss_pred HHHHHHHhCCCcc-------eEEECCCHHHHHHHHHHHhcC-----------CCCEEEEcCCcHHHHHHHHHHcCC---E
Confidence 3445555677765 788999999888766665432 566788888999999999999999 9
Q ss_pred eEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHH---HhCCEEEeeccccccccc
Q 048643 218 FRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAK---QFGIWVHVDAAYAGSACI 294 (506)
Q Consensus 218 v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~---~~g~~lhVDaA~gg~~~~ 294 (506)
++.||.+ ++.+|+++|++++++.+ .+|+++.++|+||.+-+.+++.++++ +++ ++++|.+|..+..
T Consensus 129 v~~v~~~---~~~~d~~~l~~~~~~~~------~~v~i~~P~NPTG~~~~~~~l~~l~~~~~~~~-~~iiDe~y~~~~~- 197 (366)
T PRK01533 129 VKEVALN---NGVYDLDEISSVVDNDT------KIVWICNPNNPTGTYVNDRKLTQFIEGISENT-LIVIDEAYYEYVT- 197 (366)
T ss_pred EEEeecC---CCCcCHHHHHHHhCcCC------cEEEEeCCCCCCCCCcCHHHHHHHHHhCCCCC-EEEEEccHHHhhc-
Confidence 9999986 34799999999886543 36777889999999987666655554 555 6778999964332
Q ss_pred CccchhhhcCCCC--CCeeEEcCccccCC-CCcceEEEEeCchhHHhhhcC-CccccCCccccCCCccCCCCccccCCCC
Q 048643 295 CPEFQHFIDGVEG--ADSFSLNAHKWFFT-TLDCCCLWVKDPSALVSSLST-NPEYLKNKATESKQVVDYKDWQITLSRR 370 (506)
Q Consensus 295 ~~~~~~~~~gi~~--aDsi~~~~hK~l~~-p~~~g~~~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~sr~ 370 (506)
.......+..+.. --.+..++.|.++. ..-+|+++.. +... +.+.. ...| .
T Consensus 198 ~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~~-~~~~-~~l~~~~~~~-----------------------~ 252 (366)
T PRK01533 198 AKDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVGH-EELI-EKLNVVRLPF-----------------------N 252 (366)
T ss_pred cccCcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhCC-HHHH-HHHHHhcCCC-----------------------C
Confidence 1111111111111 12455678899874 4567776543 3332 22211 1000 0
Q ss_pred CCchHHHHHHHHhch-hHHHHHHHHHHHHHHHHHHHHHcCCCCc---c--ceEEEeecCCCcccccccccchHHHHHHHH
Q 048643 371 FRSLKLWLVIRNYGV-ANLRHFLRSHVNMAKLFERLVASDKRVS---P--SAVMDKLKPKYENCHSQQLVTEEEAINEFN 444 (506)
Q Consensus 371 ~~al~~~~~l~~~G~-~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p--~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (506)
...+...++...+.. +..++..+...+..+++.+.+++. +++ | +.+.+++ +. .
T Consensus 253 ~~~~~q~aa~~~l~~~~~~~~~~~~~~~~r~~~~~~l~~~-g~~~~~~~~nf~~~~~-~~-------------------~ 311 (366)
T PRK01533 253 VSSLAQKAATIAFGDDEFIEEIVRVNTEGLRQYESFCKEN-EIPFYQSQTNFIFLPV-EN-------------------G 311 (366)
T ss_pred cCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC-CCccCCCcCcEEEEeC-CC-------------------H
Confidence 123344444454432 345566666777788888888776 666 3 6566655 22 2
Q ss_pred HHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 048643 445 RELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAF 498 (506)
Q Consensus 445 ~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l 498 (506)
.++.+.|.++|+.. .+. ..++|+++. +.++.++++++|+++.+.-
T Consensus 312 ~~~~~~l~~~GI~V-r~~----~~~iRis~~----~~~~~~~l~~al~~~~~~~ 356 (366)
T PRK01533 312 GEIYEACAHAGFII-RPF----PNGVRITVG----TREQNEGVISVLQQHFENK 356 (366)
T ss_pred HHHHHHHHHCCcEE-ccC----CCceEEeCC----CHHHHHHHHHHHHHHHHhc
Confidence 35677777888754 332 357999985 5679999999999886544
No 252
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.64 E-value=2.7e-13 Score=140.47 Aligned_cols=323 Identities=13% Similarity=0.047 Sum_probs=195.4
Q ss_pred HHHHHHHHhhcC-CCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEE--EcCCchHHHHHHHHHHHHHHHHh
Q 048643 107 GFLGEMLSSGFN-VVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGV--IQGTTCEAILCTLTAARDRVLNK 183 (506)
Q Consensus 107 ~~~~~~l~~~~n-~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~--~t~ggt~a~l~al~~ar~~~~~~ 183 (506)
..+.+.+..... .....|....+..++.+.+.+|+.+..+.+.+. ...+ .|.||+.|...++.+.+.. ++
T Consensus 50 ~~~~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~-----~~v~~~~t~G~~~al~~~~~~l~~~-~~- 122 (404)
T PTZ00376 50 ESVRKAEKIIAEKNLDKEYLPIEGLQSFIEAAQKLLFGEASYALAE-----KRIATVQALSGTGALRLGFEFLKRF-LP- 122 (404)
T ss_pred hHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHhcCCCcccccc-----CeEEEeeccCcchHHHHHHHHHHHh-cC-
Confidence 344444433332 223556666778899999999986654422111 1444 4888888876665543221 11
Q ss_pred hcccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCC
Q 048643 184 IGRENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAIT 263 (506)
Q Consensus 184 ~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG 263 (506)
++..|++.+.++......++.+|+ +++.+|+.+++++.+|++.+++++++... ...+++.+.++|+||
T Consensus 123 ------~Gd~Vlv~~P~y~~~~~~~~~~G~---~~~~v~l~~~~~~~~d~~~l~~~~~~~~~---~~~~~~~~~p~NPTG 190 (404)
T PTZ00376 123 ------AGTTVYVSNPTWPNHVNIFKSAGL---NVKEYRYYDPKTKGLDFDGMLEDLRTAPN---GSVVLLHACAHNPTG 190 (404)
T ss_pred ------CCCEEEEcCCCchhHHHHHHHcCC---ceeeccccCcccCCcCHHHHHHHHHhCCC---CCEEEEeCCCCCCCC
Confidence 667889999999999999999999 99999984333579999999999875311 134677789999999
Q ss_pred cc---cChhHHHHHHHHhCCEEEeecccccccccCc--cchhhhcCC-CCC-C-eeEEcCccccCC-CCcceEEE--EeC
Q 048643 264 AV---DPLKPLCDVAKQFGIWVHVDAAYAGSACICP--EFQHFIDGV-EGA-D-SFSLNAHKWFFT-TLDCCCLW--VKD 332 (506)
Q Consensus 264 ~i---dpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~--~~~~~~~gi-~~a-D-si~~~~hK~l~~-p~~~g~~~--~r~ 332 (506)
.+ +.+++|+++|++|++|+++|.+|..+..-.. .... +..+ +.. . .+..++.|.+++ ..-+|+++ +.+
T Consensus 191 ~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~-~~~~~~~~~~vi~i~SfSK~~~~~GlRvG~~~~~~~~ 269 (404)
T PTZ00376 191 VDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYA-IRLFAERGVEFLVAQSFSKNMGLYGERIGALHIVCAN 269 (404)
T ss_pred CCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHH-HHHHHhcCCcEEEEEeCCCcccccccccceEEEEeCC
Confidence 99 4578889999999999999999976543110 1111 1111 111 2 344568999995 57799875 445
Q ss_pred chhHHhhhcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhch--------hHHHHHHHHHHHHHHHHHH
Q 048643 333 PSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGV--------ANLRHFLRSHVNMAKLFER 404 (506)
Q Consensus 333 ~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~--------~g~~~~i~~~~~~a~~l~~ 404 (506)
++...........+... ...+. ..+..+++...+.. +.++++.++..+..+.+.+
T Consensus 270 ~~~~~~l~~~~~~~~~~--------------~~~~~---~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~ 332 (404)
T PTZ00376 270 KEEAANVLSQLKLIIRP--------------MYSSP---PIHGARIADRILSDPELRAEWLSELKEMSGRIQNMRQLLYD 332 (404)
T ss_pred HHHHHHHHHHHHHHHhh--------------hcCCC---chHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44221111000000000 00000 11223333333321 1234555677788888999
Q ss_pred HHHcCC---CCc---c--ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecC
Q 048643 405 LVASDK---RVS---P--SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGA 476 (506)
Q Consensus 405 ~l~~~~---~~~---p--~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~ 476 (506)
.|++.. +++ | +.+.| ..-. .++.++|.++..+++.+. + |+++++
T Consensus 333 ~L~~~~~~~~~~~~~p~gg~f~~-~~~~--------------------~~~~~~L~~~~~v~v~p~---~----Ris~~~ 384 (404)
T PTZ00376 333 ELKALGSPGDWEHIINQIGMFSF-TGLT--------------------KEQVERLIEKYHIYLLDN---G----RISVAG 384 (404)
T ss_pred HHHhcCCCCcccccccCceEEEe-cCCC--------------------HHHHHHHHHhCCEeecCC---C----eEEEec
Confidence 998762 233 4 22222 2111 244556666634455443 2 999954
Q ss_pred CCCCHHHHHHHHHHHHHHHH
Q 048643 477 TLTEERHVMVAWTMVQEQLE 496 (506)
Q Consensus 477 ~~tt~edi~~li~~l~~~~~ 496 (506)
.+.++++.+++.|+++..
T Consensus 385 --~~~~~~~~~~~~l~~~~~ 402 (404)
T PTZ00376 385 --LTSKNVDYVAEAIHDVVR 402 (404)
T ss_pred --cCHHhHHHHHHHHHHHHh
Confidence 577799999999998764
No 253
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.63 E-value=4.8e-13 Score=138.13 Aligned_cols=296 Identities=12% Similarity=0.028 Sum_probs=177.6
Q ss_pred HHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCC
Q 048643 134 ENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGI 213 (506)
Q Consensus 134 E~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~ 213 (506)
..++.+.|+++.+.+ ..+++++||+||..|+.+||.....+.+ . .+..+|......|-+..-+....|.
T Consensus 79 ~~~la~~L~~~~~~~---------~~~f~~SGseA~e~Alk~ar~~~~~~~~-~-~r~~ii~~~~~yHG~~~~~~~~~~~ 147 (397)
T TIGR03246 79 VLRLAKKLVDATFAD---------KVFFCNSGAEANEAALKLARRYALDKHG-A-DKSEIVAFKNSFHGRTLFTVSVGGQ 147 (397)
T ss_pred HHHHHHHHHhhCCCC---------EEEEeCCcHHHHHHHHHHHHHHHHhcCC-C-CCCEEEEECCCcCCccHHHHHhcCC
Confidence 344556677766542 5689999999999999999876432211 0 1345666677778776655554442
Q ss_pred C---------CCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc----cChhHHHHHHHHhCC
Q 048643 214 D---------LKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV----DPLKPLCDVAKQFGI 280 (506)
Q Consensus 214 g---------~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i----dpl~~I~~ia~~~g~ 280 (506)
. ...+..+|. .|+++|++++.+. +.+|++.-..+..|.+ +.+++|.++|++||+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~------~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~ 214 (397)
T TIGR03246 148 PKYSQGFAPLPGGIKHAPY-------NDLAAAKALISDK------TCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNA 214 (397)
T ss_pred cccccCCCCCCCceEEeCC-------CCHHHHHHHhccC------eEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCC
Confidence 1 012333332 3789999988643 3466666555556644 459999999999999
Q ss_pred EEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCC
Q 048643 281 WVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDY 360 (506)
Q Consensus 281 ~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~ 360 (506)
++++|++|.|......-+.....++ ..|.+++ -|.++..+..|+++.++. +.+.+... ...
T Consensus 215 llI~DEv~tG~Gr~G~~~a~~~~gv-~pDi~t~--~K~lggG~pigav~~~~~--i~~~~~~~----~~~---------- 275 (397)
T TIGR03246 215 LLIFDEVQTGVGRTGELYAYMHYGV-TPDILTS--AKALGGGFPIGAMLTTTE--IAAHLKVG----THG---------- 275 (397)
T ss_pred EEEEechhhcCCccccchhhhhcCC-CCCEEEe--ehhhhCCcceeEEEEcHH--HHHhccCC----CcC----------
Confidence 9999999865522111111111234 5787765 688875677888877643 23333211 000
Q ss_pred CCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCC----Cc--c---ceEEEeecCCCcccccc
Q 048643 361 KDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKR----VS--P---SAVMDKLKPKYENCHSQ 431 (506)
Q Consensus 361 ~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~----~~--p---~~v~f~~~~~~~~~~~~ 431 (506)
.+. .+-+.......++|..+.. .++.++..++.++|.+.|+++.. +. + .++.+.+.+.
T Consensus 276 --~t~-~~~p~~~aaa~a~l~~~~~---~~l~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~------- 342 (397)
T TIGR03246 276 --TTY-GGNPLACAVAGKVLDLVNT---PELLAGVKQRHDLFVDGLEKINARYNVFSEIRGKGLLIGAVLTEA------- 342 (397)
T ss_pred --CCC-CCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhcCCCeEeeecCceEEEEEEcCc-------
Confidence 011 1111122333445554432 35677788888999998877521 11 1 2333333221
Q ss_pred cccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 048643 432 QLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAF 498 (506)
Q Consensus 432 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l 498 (506)
.......+.+.|.++|.+... .+..++|++. +...+++||+++++.|++..+++
T Consensus 343 --------~~~~~~~~~~~l~~~Gv~~~~----~g~~~lR~~p-~~~~t~~~i~~~~~~l~~~l~~~ 396 (397)
T TIGR03246 343 --------YQGKAKQFVNAAAEEGVIALI----AGPNVVRFAP-SLVISDDDIDEGLARFERAIEQV 396 (397)
T ss_pred --------hhhHHHHHHHHHHHCCeEEee----cCCCEEEEeC-CCCCCHHHHHHHHHHHHHHHHHh
Confidence 012346777888888975432 2346899987 46678889999999999887653
No 254
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.63 E-value=5.8e-14 Score=140.65 Aligned_cols=333 Identities=13% Similarity=0.018 Sum_probs=206.4
Q ss_pred ccccCCCCCC-HHHHHHHHHHhhcCCCC------cccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchH
Q 048643 95 YFAYFPSSGS-IAGFLGEMLSSGFNVVG------FNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCE 167 (506)
Q Consensus 95 ~~~~~~~~~~-~~~~~~~~l~~~~n~~~------~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~ 167 (506)
-+.|.+++.. ++.++.++-.+.+|.++ .....+|.+.++-.++.+.|.++++.|+++ .-.++++|||.
T Consensus 5 ~~nF~aGPa~lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~~F~~i~~~~~~~Lr~Ll~~P~~y-----~Vlfl~GggT~ 79 (364)
T PRK12462 5 QLNFSGGPGALPDTVLEQVRQAVVELPETGLSVLGMSHRSSWFSSLLAQAEADLRDLLGIPDEY-----GVVFLQGGSSL 79 (364)
T ss_pred cceecCCCcCCCHHHHHHHHHHHhcccccCccccccccccHHHHHHHHHHHHHHHHHhCCCCCC-----eEEEEeccHHH
Confidence 4567777654 44566666666666433 122356788899999999999999998764 23466666776
Q ss_pred HHHHHHHHHHHHHHHhhcccCCCCeEE-EeCCCCchH--HHHHHHHhCCCCCCeEEEecCCCCC--cccCHHHHHHHHHH
Q 048643 168 AILCTLTAARDRVLNKIGRENISKLVV-YGSDQTHCA--LQKAAQIVGIDLKNFRAIKTTKSSS--YGLSPDSLLTQINL 242 (506)
Q Consensus 168 a~l~al~~ar~~~~~~~~~~~~~~~~v-~~s~~~H~s--~~ka~~~~G~g~~~v~~v~~~~~~~--~~~d~~~L~~~i~~ 242 (506)
+.-.+++-.... ++.++ |+. ..+.+ +.+-++.+| ++..+...+..+ .-.+++.+ .+.+
T Consensus 80 ~~ea~~~Nll~~----------g~~~~~~~~-tG~fg~r~~~ea~~~g----~v~~~~~~~~~~~~~~p~~~~~--~~~~ 142 (364)
T PRK12462 80 QFSMIPMNFSRP----------GAAAPEYVT-TGYWSRKAIGEASRVA----AMRVVWDGAASGYRTLPSLAEL--DWDA 142 (364)
T ss_pred HHHHHHHHcCCC----------CCcEEEEEe-CCHHHHHHHHHHHhcC----CceEecCcCCCCCCcCCCHHHh--ccCC
Confidence 664444332211 22122 333 34433 344444444 244443211111 24455554 1222
Q ss_pred HHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCC
Q 048643 243 DVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTT 322 (506)
Q Consensus 243 ~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p 322 (506)
+ ..+|..|+..|.+|...| ++.+.++..++||+.-+.+...++ ++..|.+....+|.++ |
T Consensus 143 d------~~~v~~t~NETstGv~~~-----~~~~~~~~llvvD~sS~~~s~pid--------~~~~dvi~agsQKnlg-P 202 (364)
T PRK12462 143 R------APFRHYVSNETVEGLQFP-----DAAGLPDSPLIADMSSDFMSRPFD--------VEAYGMVYAHAQKNLG-P 202 (364)
T ss_pred C------CcEEEEccCCCCceEecC-----cccccCCCeEEEEcCchhhCCCCC--------hHHccEEEeeccccCC-C
Confidence 2 237999999999999876 333446899999996544433332 2256999999999999 8
Q ss_pred CcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCccccCCCC-CCchHHHHHHHHhchh--HHHHHHHHHHHHH
Q 048643 323 LDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRR-FRSLKLWLVIRNYGVA--NLRHFLRSHVNMA 399 (506)
Q Consensus 323 ~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~l~~~G~~--g~~~~i~~~~~~a 399 (506)
.|.++++++++.. .+.-...+.|+.-...-. ..+...+-+ +....+-.+++.+-.+ |++++.+++.+.+
T Consensus 203 ~Gltvvivs~~al-~~~~~~~p~~ldy~~~~~-------~~s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ka 274 (364)
T PRK12462 203 AGVTVAIIRRALL-ERVPDTLPPMLDFRTHVE-------HRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKA 274 (364)
T ss_pred CceEEEEECHHHH-hhccccCCchhhHHHHHh-------cCCCCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHH
Confidence 8999999997653 222122233322100000 000001111 1223334455555566 9999999999999
Q ss_pred HHHHHHHHcCCCCc-----c-----ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEE
Q 048643 400 KLFERLVASDKRVS-----P-----SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYA 469 (506)
Q Consensus 400 ~~l~~~l~~~~~~~-----p-----~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~ 469 (506)
+.+++.|++.++|. | ..|+|++.. .++..++.+...+.|.+-+.+... .+.
T Consensus 275 ~~ly~~id~~~~~~~~~~~~~~RS~mnv~f~~~~-----------------~~l~~~f~~~a~~~gl~~lkGhr~--vgg 335 (364)
T PRK12462 275 AMLYATLDALNEVIDCHAHRAARSTMNVAFRFRQ-----------------PRLDTLFKEQSTEAGFCGLSGHRS--IGG 335 (364)
T ss_pred HHHHHHHHhCCCcccCCCChhhcCcceEEEEcCC-----------------HHHHHHHHHHHHHCCCccccCCcc--cCc
Confidence 99999999998665 2 779998754 346788888888899866655433 345
Q ss_pred EEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 048643 470 MRFAVGATLTEERHVMVAWTMVQEQLEA 497 (506)
Q Consensus 470 lR~~~~~~~tt~edi~~li~~l~~~~~~ 497 (506)
+|+|+-| ..+.|++++|++-+++..++
T Consensus 336 ~Ras~yn-a~~~e~v~~L~~fm~~f~~~ 362 (364)
T PRK12462 336 IRASLYN-AVSEQAVSRLCAFLKDFAIR 362 (364)
T ss_pred eEEEcCC-CCCHHHHHHHHHHHHHHHHh
Confidence 9999954 56777999999999988654
No 255
>PRK04311 selenocysteine synthase; Provisional
Probab=99.63 E-value=3.1e-13 Score=140.52 Aligned_cols=160 Identities=16% Similarity=0.125 Sum_probs=114.2
Q ss_pred HHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchH------HHHHHH
Q 048643 136 IVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCA------LQKAAQ 209 (506)
Q Consensus 136 ~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s------~~ka~~ 209 (506)
.+.+.+++++|.+ ..+++++|+.|+..++.+. . ++..|++|...|+. +...++
T Consensus 131 ~~e~~lA~l~Gae---------~a~vv~sgtaAl~l~l~~l-~-----------~GdeVIvs~~e~~~~ggs~~i~~~~~ 189 (464)
T PRK04311 131 ALAALLCALTGAE---------DALVVNNNAAAVLLALNAL-A-----------AGKEVIVSRGELVEIGGAFRIPDVMR 189 (464)
T ss_pred HHHHHHHHHhCCC---------eEEEECCHHHHHHHHHHHh-C-----------CCCEEEEcchhhhhcCcchhhHHHHH
Confidence 5667789999976 3577888888887766432 1 45567788766652 445667
Q ss_pred HhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCC--CC--cccChhHHHHHHHHhCCEEEee
Q 048643 210 IVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTA--IT--AVDPLKPLCDVAKQFGIWVHVD 285 (506)
Q Consensus 210 ~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~--tG--~idpl~~I~~ia~~~g~~lhVD 285 (506)
..|+ +++.|+++. ..++++++++|+++++ +|+.++.+++ +| .+-|+++|+++|++||++++||
T Consensus 190 ~~G~---~l~~v~~~~----~t~~~dle~aI~~~Tk------lV~~vh~sN~~i~G~~~~~dl~eI~~lak~~gi~vivD 256 (464)
T PRK04311 190 QAGA---RLVEVGTTN----RTHLRDYEQAINENTA------LLLKVHTSNYRIEGFTKEVSLAELAALGKEHGLPVVYD 256 (464)
T ss_pred HCCc---EEEEECCCC----CCCHHHHHHhcCccCe------EEEEEcCCCccccccCCcCCHHHHHHHHHHcCCeEEEE
Confidence 7888 888887642 5689999999987654 6777777775 44 5679999999999999999999
Q ss_pred ccccccc----c---cCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeC
Q 048643 286 AAYAGSA----C---ICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKD 332 (506)
Q Consensus 286 aA~gg~~----~---~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~ 332 (506)
++.|... . ..+.....+. .++|.+++++|||++.|. +|+++.++
T Consensus 257 ~gsG~l~~~~~~gl~~~p~~~~~l~--~GaDiv~fSg~K~LgGp~-~G~i~g~~ 307 (464)
T PRK04311 257 LGSGSLVDLSQYGLPDEPTVQELLA--AGVDLVTFSGDKLLGGPQ-AGIIVGKK 307 (464)
T ss_pred CCCcccccchhccCCCCCchhhHHh--cCCcEEEecCcccccCCc-eEEEEEcH
Confidence 9654321 0 0111111111 279999999999999984 88888764
No 256
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.63 E-value=7.5e-13 Score=137.31 Aligned_cols=161 Identities=14% Similarity=0.121 Sum_probs=114.0
Q ss_pred HHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCch------HHHHHH
Q 048643 135 NIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHC------ALQKAA 208 (506)
Q Consensus 135 ~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~------s~~ka~ 208 (506)
..+.+.+++++|.+. .+++++|+.|+..++.+. . ++..|++++..|. ++...+
T Consensus 125 ~~le~~lA~l~gae~---------alvv~sg~aAi~l~l~~l-~-----------~GdeVIvs~~e~v~~ggs~~i~~~~ 183 (454)
T TIGR00474 125 SHVEGLLCELTGAED---------ALVVNNNAAAVLLALNTL-A-----------KGKEVIVSRGELVEIGGSFRIPDVM 183 (454)
T ss_pred HHHHHHHHHHhCCCc---------EEEECCHHHHHHHHHHHh-C-----------CcCEEEECCChhhhhcchhhHHHHH
Confidence 456678999999864 366777888887666432 1 4556778876652 455567
Q ss_pred HHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCC--CC--cccChhHHHHHHHHhCCEEEe
Q 048643 209 QIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTA--IT--AVDPLKPLCDVAKQFGIWVHV 284 (506)
Q Consensus 209 ~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~--tG--~idpl~~I~~ia~~~g~~lhV 284 (506)
+..|+ +++.++++. ..|+++++++|.++++ +|+.++.+++ .| .+-|+++|+++||+||++++|
T Consensus 184 ~~~G~---~~~~v~~~~----~~~l~dle~aI~~~T~------lv~~~h~sN~~~~G~~~~~dl~~I~~la~~~g~~viv 250 (454)
T TIGR00474 184 EQSGA---KLVEVGTTN----RTHLKDYEDAITENTA------LLLKVHTSNYRIVGFTEEVSIAELVALGREHGLPVME 250 (454)
T ss_pred HHcCC---EEEEeCCCC----CCCHHHHHHhcCcCCE------EEEEEccCcccccCCCCCCCHHHHHHHHHHcCCeEEE
Confidence 77888 898887642 5689999999977654 6777777766 36 578999999999999999999
Q ss_pred eccccccc------c-cCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeC
Q 048643 285 DAAYAGSA------C-ICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKD 332 (506)
Q Consensus 285 DaA~gg~~------~-~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~ 332 (506)
|++.|... + ..|....... .++|.+++++|||++.|. +|+++.++
T Consensus 251 D~~sG~l~~~~~~gl~~~p~~~~~~~--~GaDiv~fSg~K~LgGp~-~G~i~g~~ 302 (454)
T TIGR00474 251 DLGSGSLVDLSRYGLPDEPTVQEVIA--AGVDLVTFSGDKLLGGPQ-AGIIVGKK 302 (454)
T ss_pred ECCCcccccchhccCCCCcccccHhH--cCCCEEEecCccccCCCe-EEEEEECH
Confidence 98644320 0 0111111111 279999999999999885 78888775
No 257
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=99.63 E-value=2e-13 Score=132.96 Aligned_cols=322 Identities=14% Similarity=0.082 Sum_probs=216.0
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHH
Q 048643 127 SPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQK 206 (506)
Q Consensus 127 ~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~k 206 (506)
-.+...+.+++++.|.+.-|-+..|. +...++++|+|.||-+.+.+.-+ |+...+++.+.+..+.+
T Consensus 120 y~Gl~~frqa~A~Fm~~~r~~~v~fd---P~~~Vv~~G~T~ane~l~fcLad-----------pgdafLvPtPyY~gfdr 185 (471)
T KOG0256|consen 120 YHGLPSFRQAVAEFMERARGNRVKFD---PERVVVTNGATSANETLMFCLAD-----------PGDAFLVPTPYYPGFDR 185 (471)
T ss_pred ccCchHHHHHHHHHHHHHhCCCCccC---ccceEEecccchhhHHHHHHhcC-----------CCceeeecCCCCCcccc
Confidence 34567899999999999888776653 23689999999988655544433 78888899888888887
Q ss_pred HHHH-hCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC---hhHHHHHHHHhCCEE
Q 048643 207 AAQI-VGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP---LKPLCDVAKQFGIWV 282 (506)
Q Consensus 207 a~~~-~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp---l~~I~~ia~~~g~~l 282 (506)
-+++ .|+ ++++|.++..+++++++++||+++.+..+.|.+.-.|+++.++|+.|.+-+ |..+...|.++++.+
T Consensus 186 dl~~rTgv---eivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHv 262 (471)
T KOG0256|consen 186 DLRWRTGV---EIVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHV 262 (471)
T ss_pred cceeccCc---eEEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEE
Confidence 6664 488 999999987778999999999999999999999999999999999999954 667777888999999
Q ss_pred EeecccccccccCccchhhhcCCC----CCC--eeEEcCccccCCC-CcceEEEEeCchhHHhhhcCCccccCCccccCC
Q 048643 283 HVDAAYAGSACICPEFQHFIDGVE----GAD--SFSLNAHKWFFTT-LDCCCLWVKDPSALVSSLSTNPEYLKNKATESK 355 (506)
Q Consensus 283 hVDaA~gg~~~~~~~~~~~~~gi~----~aD--si~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~ 355 (506)
++|..|++...-.+++...+.-.+ .-| -|.++..|=++.| +-.|+++..|......+-+...-++...
T Consensus 263 I~DEIya~sVF~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYS~ne~VvsaA~kmssf~~vSs----- 337 (471)
T KOG0256|consen 263 ISDEIYAGSVFDKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNNEDVVSAATKMSSFGLVSS----- 337 (471)
T ss_pred EeehhhcccccCccCceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEEecChHHHHHHHHHhhccCCcH-----
Confidence 999999998776555543322111 223 3566788988877 6688888888765433222111111110
Q ss_pred CccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc--c---ceEEEeecCCCccccc
Q 048643 356 QVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS--P---SAVMDKLKPKYENCHS 430 (506)
Q Consensus 356 ~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~--p---~~v~f~~~~~~~~~~~ 430 (506)
+.. .-+.-.++=..+-++-+++.-.|....-+++.+.|+++ |+. + +++|+.-...-..
T Consensus 338 ----------~tQ---~~la~LLSD~~f~~~yl~en~~Rl~~rh~~~~~gLk~l-gI~cl~s~AGlF~wvDlr~lL~--- 400 (471)
T KOG0256|consen 338 ----------QTQ---YLLASLLSDEEFTREYLRENNKRLRIRHRYIVEGLKAL-GIPCLKSNAGLFCWVDLRKLLT--- 400 (471)
T ss_pred ----------HHH---HHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHhhHHhc-CCceeecCCeeEEEEEhHHhcC---
Confidence 000 00111111122333445566666777778899999887 665 3 7777642211000
Q ss_pred ccccchHHHHHHHHHHHHHHHHhcCcEEEeeee---ECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 048643 431 QQLVTEEEAINEFNRELLESINASGKAYMTHAV---CGGIYAMRFAVGATLTEERHVMVAWTMVQEQLE 496 (506)
Q Consensus 431 ~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~---~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~ 496 (506)
..+ .+--..|.+++...-++.++|+. ....+|+|+|+.| +.++.++-.++.|+..+.
T Consensus 401 ---s~t----fe~El~Lw~~i~~~vklnlSpG~s~~C~EpGWFRvcFAn--~~~~t~~~am~Ri~~~~~ 460 (471)
T KOG0256|consen 401 ---SLT----FEGELELWERILDNVKLNLSPGSSCHCHEPGWFRVCFAN--MSEETLEVAMRRLKQFLD 460 (471)
T ss_pred ---cCC----hHHHHHHHHHHHHhhccccCCCCcceecCCCeEEEEecc--CCHHHHHHHHHHHHHHHH
Confidence 001 11123455666655345666664 3467899999965 566666667777777765
No 258
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.63 E-value=3.8e-13 Score=139.22 Aligned_cols=301 Identities=12% Similarity=0.056 Sum_probs=176.9
Q ss_pred HHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhC
Q 048643 133 LENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVG 212 (506)
Q Consensus 133 lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G 212 (506)
....+.+.+++++|++ ..+++++||+||..|+..+|.....+.+....++.+|.+....|-+...+....+
T Consensus 74 ~~~~~~~~l~~~~~~~---------~~~~~~SGs~A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~ 144 (400)
T PTZ00125 74 VLGLAEKYITDLFGYD---------KVLPMNSGAEAGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSAST 144 (400)
T ss_pred HHHHHHHHHHhCCCCC---------EEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcC
Confidence 4445556677777653 4688999999999999999865322222111134566667677776666655443
Q ss_pred CCCC---------CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC----hhHHHHHHHHhC
Q 048643 213 IDLK---------NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP----LKPLCDVAKQFG 279 (506)
Q Consensus 213 ~g~~---------~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp----l~~I~~ia~~~g 279 (506)
-... .+..++ ..|+++|+++++. ..+.+|++....+++|.+-| +++|.++|++||
T Consensus 145 ~~~~~~~~~~~~~~~~~~~-------~~d~~~le~~l~~-----~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~ 212 (400)
T PTZ00125 145 DPKCYNNFGPFVPGFELVD-------YNDVEALEKLLQD-----PNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYN 212 (400)
T ss_pred CcchhccCCCCCCCceEeC-------CCCHHHHHHHhCC-----CCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcC
Confidence 2100 112222 2389999998851 12456777777889999877 999999999999
Q ss_pred CEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCC-cceEEEEeCchhHHhhhcCCccccCCccccCCCcc
Q 048643 280 IWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTL-DCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVV 358 (506)
Q Consensus 280 ~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~-~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~ 358 (506)
+++++|++|.+.......+.....++ ..|.++++ |+++.++ ++|++++++. +.+.+.... ..
T Consensus 213 ~lli~Dev~~g~g~~G~~~~~~~~~~-~pd~~~~s--K~l~~g~~~ig~v~~~~~--~~~~~~~~~--~~---------- 275 (400)
T PTZ00125 213 VLLIVDEIQTGLGRTGKLLAHDHEGV-KPDIVLLG--KALSGGLYPISAVLANDD--VMLVIKPGE--HG---------- 275 (400)
T ss_pred CEEEEeccccCCCccchhhHHHhcCC-CCCEEEEc--ccccCCCcCcEEEEEcHH--HHhhccCCC--CC----------
Confidence 99999999975322111111111233 45777764 9998775 7888887653 222222100 00
Q ss_pred CCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcC----CCCc---c--ceEEEeecCCCcccc
Q 048643 359 DYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASD----KRVS---P--SAVMDKLKPKYENCH 429 (506)
Q Consensus 359 ~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~----~~~~---p--~~v~f~~~~~~~~~~ 429 (506)
.+. .+-+.....+..+++.+-.+++ .++..++.+++.+.|++. +.+. + .++.+.+.+..
T Consensus 276 ----~t~-~~~~~~~~aa~~~l~~i~~~~~---~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~g~~~~v~~~~~~---- 343 (400)
T PTZ00125 276 ----STY-GGNPLACAVAVEALEVLKEEKL---AENAQRLGEVFRDGLKELLKKSPWVKEIRGKGLLNAIVFDHSD---- 343 (400)
T ss_pred ----CCC-CcCHHHHHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHHHHHhcCCCeEEEecccEEEEEEEccCc----
Confidence 000 1111122222333444433343 344455667777777653 2222 2 33344443210
Q ss_pred cccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 048643 430 SQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAFL 499 (506)
Q Consensus 430 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l~ 499 (506)
......+.+.+.++|+. +.+. +..++|++.+ ...++++|+++++.|.++.+++.
T Consensus 344 -----------~~~~~~~~~~l~~~Gv~-v~~~---~~~~lRi~~~-~~~~~~~i~~~l~~l~~~l~~~~ 397 (400)
T PTZ00125 344 -----------GVNAWDLCLKLKENGLL-AKPT---HDNIIRFAPP-LVITKEQLDQALEIIKKVLKSFD 397 (400)
T ss_pred -----------chHHHHHHHHHHHCCeE-Eeec---CCCEEEEECC-ccCCHHHHHHHHHHHHHHHHHHh
Confidence 11234667777777864 4442 3468999984 45688899999999999888763
No 259
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=99.63 E-value=1.3e-14 Score=142.26 Aligned_cols=292 Identities=10% Similarity=0.039 Sum_probs=191.3
Q ss_pred HHHHHHHHHhcCCCCCCCCCCccccCCCCCCHHHHHHHHHHhhcCC-CCcccccChhhHHHHHHHHHHHHHHcCCCCccc
Q 048643 74 TILQDVQEHIVPGVTHWQSPNYFAYFPSSGSIAGFLGEMLSSGFNV-VGFNWISSPAATELENIVMDWLGQMLKLPKSFL 152 (506)
Q Consensus 74 ~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~-~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~ 152 (506)
.|..++.+........ +| +|.-...-.+|..+.+.+...... ....|..+-+..++.+.+++.+++++|-....
T Consensus 18 ~vw~e~~~la~e~~~~--~~--LgqGfp~~~~P~fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~- 92 (420)
T KOG0257|consen 18 YVWTEINRLAAEHKVP--NP--LGQGFPDFPPPKFVTEAAKNAAKEPSTNQYTRGYGLPQLRKALAKAYSEFYGGLLDP- 92 (420)
T ss_pred cHHHHHHHHHHhcCCC--Cc--ccCCCCCCCCcHHHHHHHHHHhccchhccccccCCchHHHHHHHHHHHHHhccccCC-
Confidence 4555555444433322 22 443222344566666666554433 24456666678889999999999987754321
Q ss_pred cCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecC------CC
Q 048643 153 FSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTT------KS 226 (506)
Q Consensus 153 ~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~------~~ 226 (506)
....++|.|+.+++..+++...+ +++.|++-+....+......++|. ..+.||.. ..
T Consensus 93 ---~~eVlVT~GA~~ai~~~~~~l~~-----------~GDeVii~eP~fd~Y~~~~~maG~---tpv~v~~~~~~g~~~s 155 (420)
T KOG0257|consen 93 ---DDEVLVTAGANEAISSALLGLLN-----------PGDEVIVFEPFFDCYIPQVVMAGG---TPVFVPLKPKEGNVSS 155 (420)
T ss_pred ---cccEEEecCchHHHHHHHHHHcC-----------CCCEEEEecCcchhhhhHHhhcCC---cceeeccccccccccC
Confidence 12789999999999988887766 677888889999999999999999 88888876 34
Q ss_pred CCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCccc---ChhHHHHHHHHhCCEEEeecccccccccCc---cchh
Q 048643 227 SSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVD---PLKPLCDVAKQFGIWVHVDAAYAGSACICP---EFQH 300 (506)
Q Consensus 227 ~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~id---pl~~I~~ia~~~g~~lhVDaA~gg~~~~~~---~~~~ 300 (506)
.+|.+|.+.||.++.+.++ +|+++.++|++|.+- .|++|++||++||+|++.|.+|...+.--. ....
T Consensus 156 ~~~~~D~~~le~~~t~kTk------~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~as 229 (420)
T KOG0257|consen 156 SDWTLDPEELESKITEKTK------AIILNTPHNPTGKVFSREELERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIAS 229 (420)
T ss_pred ccccCChHHHHhhccCCcc------EEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeec
Confidence 5799999999999998776 899999999999995 489999999999999999999965433211 1111
Q ss_pred hhcCCCCCCeeEEcCccccC-CCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCccccCCCCC---CchHH
Q 048643 301 FIDGVEGADSFSLNAHKWFF-TTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRF---RSLKL 376 (506)
Q Consensus 301 ~~~gi~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~---~al~~ 376 (506)
+ .|+..--.=+.++.|.++ +.+-.|+++. ++..+......... ....++..+ .+.+.
T Consensus 230 l-Pgm~ertitvgS~gKtf~~TGWrlGW~ig-p~~L~~~~~~vh~~-----------------~~~~~~Tp~q~A~a~a~ 290 (420)
T KOG0257|consen 230 L-PGMYERTITVGSFGKTFGVTGWRLGWAIG-PKHLYSALFPVHQN-----------------FVFTCPTPIQEASAAAF 290 (420)
T ss_pred C-CchhheEEEeccccceeeeeeeeeeeeec-hHHhhhhHHHHhhc-----------------cccccCcHHHHHHHHHH
Confidence 1 333222222345788887 4466888777 44433222211111 111122221 11111
Q ss_pred HHHH--HHhc-hhHHHHHHHHHHHHHHHHHHHHHcCCCCc
Q 048643 377 WLVI--RNYG-VANLRHFLRSHVNMAKLFERLVASDKRVS 413 (506)
Q Consensus 377 ~~~l--~~~G-~~g~~~~i~~~~~~a~~l~~~l~~~~~~~ 413 (506)
...+ +.-+ ..-..++.....+..+.|.+.|.++ |+.
T Consensus 291 ~~~~~~~~p~~~y~~~~~~~~y~~krdil~k~L~~l-g~~ 329 (420)
T KOG0257|consen 291 ALELACLQPGGSYFITELVKEYKEKRDILAKALEEL-GLK 329 (420)
T ss_pred hhhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHhc-CCc
Confidence 1122 1112 1234458888999999999999998 887
No 260
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.62 E-value=4.2e-13 Score=139.24 Aligned_cols=318 Identities=13% Similarity=0.043 Sum_probs=188.6
Q ss_pred HHHHHHHHhhcCC-----CCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHH
Q 048643 107 GFLGEMLSSGFNV-----VGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVL 181 (506)
Q Consensus 107 ~~~~~~l~~~~n~-----~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~ 181 (506)
..+.+.+...+.. ....|...++..++.+.+.+|+.+..|++.+. ...++|+|+++++.. +..+..
T Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~-----~~I~it~Ga~~al~~-l~~~~~--- 120 (409)
T PRK07590 50 PAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQARGCDISA-----DEIFISDGAKCDTGN-ILDIFG--- 120 (409)
T ss_pred HHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHHhcCCcCCh-----hhEEECCCHHHHHHH-HHHhcC---
Confidence 3444544444432 23456666778899999999998887765432 367888888877654 322211
Q ss_pred HhhcccCCCCeEEEeCCCCchHHHHHHHHhCCCCCC-----------eEEEecCCCCCcccCHHHHHHHHHHHHhcCCcc
Q 048643 182 NKIGRENISKLVVYGSDQTHCALQKAAQIVGIDLKN-----------FRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVP 250 (506)
Q Consensus 182 ~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~-----------v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p 250 (506)
++..|++...++..+...++..|. + ++.||++.++++..|.+. ..+
T Consensus 121 --------~gd~V~v~~P~Y~~~~~~~~~~g~---~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~------------~~~ 177 (409)
T PRK07590 121 --------PDNTIAVTDPVYPVYVDTNVMAGR---TGEANEDGRYSGIVYLPCTAENNFVPELPE------------EKV 177 (409)
T ss_pred --------CCCEEEEeCCCCcchHHHHHHcCC---cccccccccccceeEeecccccCCcccCcc------------cCc
Confidence 566788889999999999999998 5 889998754445555321 124
Q ss_pred EEEEEeccCCCCCcccC---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCC-C-ee-EEcCccccC-CCC
Q 048643 251 LFLCATIGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGA-D-SF-SLNAHKWFF-TTL 323 (506)
Q Consensus 251 ~~Vv~t~gtt~tG~idp---l~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~a-D-si-~~~~hK~l~-~p~ 323 (506)
.+|+++.++|+||.+-+ +++|+++|++||+|+++|.+|+.+..- ......+..+... + .| ..++.|.++ ...
T Consensus 178 k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~-~~~~~~~~~~~~~~~~vi~~~SfSK~~~~pGl 256 (409)
T PRK07590 178 DIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISD-PSLPHSIYEIEGARECAIEFRSFSKTAGFTGT 256 (409)
T ss_pred eEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccC-CCCCcchhhCCCcccceEEEecCccccCCcCc
Confidence 46777899999999954 678888899999999999999764321 1111111112221 1 23 457899996 557
Q ss_pred cceEEEEeCchhHHhhhcCC------ccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHh---chhHHHHHHHH
Q 048643 324 DCCCLWVKDPSALVSSLSTN------PEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNY---GVANLRHFLRS 394 (506)
Q Consensus 324 ~~g~~~~r~~~~l~~~~~~~------~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~---G~~g~~~~i~~ 394 (506)
-+|+++..+ ..+ ..+... ..+..... ... . ....+...++...+ +.+.++++.++
T Consensus 257 RiG~~i~~~-~li-~~~~~~~~~~~~~~~~~~~~-----------~~~-~--~~s~~~q~a~~~~l~~~~~~~~~~~~~~ 320 (409)
T PRK07590 257 RCAYTVVPK-ELK-GKTSDGEGVSLNSLWNRRQS-----------TKF-N--GVSYIVQRAAEAVYSPEGKAQIKELIDY 320 (409)
T ss_pred eeEEEEcCH-HHh-hhccccchhhhHHHHHHHHh-----------hcc-c--CcCHHHHHHHHHHhcCCcHHHHHHHHHH
Confidence 788887643 222 111000 00000000 000 0 01112223332322 34556677777
Q ss_pred HHHHHHHHHHHHHcCCCCc---c---ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHh-cCcEEEeeeeE--C
Q 048643 395 HVNMAKLFERLVASDKRVS---P---SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINA-SGKAYMTHAVC--G 465 (506)
Q Consensus 395 ~~~~a~~l~~~l~~~~~~~---p---~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~--~ 465 (506)
..+..+++.+.|++. +++ | ..+.+++.+.- + ..++.+.+.+ .|+....+..+ .
T Consensus 321 ~~~~r~~l~~~L~~~-~~~~~~~~g~~f~wi~~~~~~---------------~--~~~~~~~l~~~~gv~v~pg~~f~~~ 382 (409)
T PRK07590 321 YMENAKIIREGLESA-GFEVYGGVNAPYIWVKTPDGM---------------S--SWDFFDKLLQEANVVGTPGSGFGPS 382 (409)
T ss_pred HHHHHHHHHHHHHhc-CCceecCCcceEEEEECCCCC---------------C--HHHHHHHHHHHCCEEEeChhHhCCC
Confidence 788888899999887 566 4 34555553310 0 1345555554 46544333322 2
Q ss_pred CEEEEEEEecCCCCCHHHHHHHHHHHHHH
Q 048643 466 GIYAMRFAVGATLTEERHVMVAWTMVQEQ 494 (506)
Q Consensus 466 g~~~lR~~~~~~~tt~edi~~li~~l~~~ 494 (506)
+..++|+++. .+++++++.++.|.++
T Consensus 383 ~~~~iRi~~~---~~~~~l~~~l~rl~~~ 408 (409)
T PRK07590 383 GEGYFRLSAF---GSRENVLEAMERIKKA 408 (409)
T ss_pred CCCEEEEEcc---CCHHHHHHHHHHHHhh
Confidence 3569999963 3677888888877653
No 261
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.62 E-value=1.5e-13 Score=139.77 Aligned_cols=281 Identities=19% Similarity=0.233 Sum_probs=182.9
Q ss_pred ccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHH
Q 048643 125 ISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCAL 204 (506)
Q Consensus 125 ~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~ 204 (506)
...|....+|+. ++++-|.. ..+++++|..|+..++.+... ++..|+++...+...
T Consensus 52 ~gnPt~~~le~~----la~Le~g~---------~a~~~~SGmaAi~~~l~~ll~-----------~Gd~iv~~~~~Y~~t 107 (386)
T PF01053_consen 52 YGNPTVRALEQR----LAALEGGE---------DALLFSSGMAAISAALLALLK-----------PGDHIVASDDLYGGT 107 (386)
T ss_dssp TC-HHHHHHHHH----HHHHHT-S---------EEEEESSHHHHHHHHHHHHS------------TTBEEEEESSSSHHH
T ss_pred cccccHHHHHHH----HHHhhccc---------ceeeccchHHHHHHHHHhhcc-----------cCCceEecCCccCcc
Confidence 456666777755 67776653 568888888777666665433 455677777766555
Q ss_pred HHHH----HHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhC-
Q 048643 205 QKAA----QIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFG- 279 (506)
Q Consensus 205 ~ka~----~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g- 279 (506)
.+.+ ...|+ ++..++. -|+++|++++++.++ +|.+..++|++..+-||++|+++|+++|
T Consensus 108 ~~~~~~~l~~~gv---~v~~~d~-------~d~~~l~~~l~~~t~------~v~~EspsNP~l~v~Dl~~i~~~a~~~g~ 171 (386)
T PF01053_consen 108 YRLLEELLPRFGV---EVTFVDP-------TDLEALEAALRPNTK------LVFLESPSNPTLEVPDLEAIAKLAKEHGD 171 (386)
T ss_dssp HHHHHHCHHHTTS---EEEEEST-------TSHHHHHHHHCTTEE------EEEEESSBTTTTB---HHHHHHHHHHTTT
T ss_pred hhhhhhhhcccCc---EEEEeCc-------hhHHHHHhhccccce------EEEEEcCCCcccccccHHHHHHHHHHhCC
Confidence 5444 44688 7877753 389999999988544 8999999999999999999999999999
Q ss_pred CEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCC--cceEEEEeCchhHHhhhcCCccccCCccccCCCc
Q 048643 280 IWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTL--DCCCLWVKDPSALVSSLSTNPEYLKNKATESKQV 357 (506)
Q Consensus 280 ~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~--~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~ 357 (506)
++++||..++.++...| +.. +||.+.-+..|+++..- -.|++.+++...+...+.....
T Consensus 172 ~~~vVDnT~atp~~~~p-L~~------GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~~~------------ 232 (386)
T PF01053_consen 172 ILVVVDNTFATPYNQNP-LEL------GADIVVHSATKYLSGHSDVMGGAVVVNGSSELYDRLREFRR------------ 232 (386)
T ss_dssp -EEEEECTTTHTTTC-G-GGG------T-SEEEEETTTTTTTSSSE-EEEEEESSHHHHHHHHHHHHH------------
T ss_pred ceEEeeccccceeeecc-CcC------CceEEEeeccccccCCcceeeEEEEECchhhhhhhhcchhh------------
Confidence 99999999988755443 222 79999999999998543 3677777763333222211100
Q ss_pred cCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc----c-------------------
Q 048643 358 VDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS----P------------------- 414 (506)
Q Consensus 358 ~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~----p------------------- 414 (506)
..+-...+..+|..++ |.+-+.-+++++.++|..+++.|+++|.++ |
T Consensus 233 --------~~G~~~~p~da~ll~r--gl~Tl~~R~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~g 302 (386)
T PF01053_consen 233 --------LLGATLSPFDAWLLLR--GLRTLPLRMERQNENAEALAEFLEEHPKVKRVYYPGLPSHPQHELAKRQMSGGG 302 (386)
T ss_dssp --------HHT-B--HHHHHHHHH--HHTTHHHHHHHHHHHHHHHHHHHHTSTTEEEEEETTSTTSTTHHHHHHHCSSCT
T ss_pred --------hcCccchHHHHHHHhc--CCCcHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEcccccccceeeeeecccccC
Confidence 1111234567787777 668899999999999999999999988765 2
Q ss_pred ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHh--cC----c--EEE-eeee--E----------CC--EEEEE
Q 048643 415 SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINA--SG----K--AYM-THAV--C----------GG--IYAMR 471 (506)
Q Consensus 415 ~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~g----~--~~~-~~~~--~----------~g--~~~lR 471 (506)
++++|.+.+. .+...++.+.|.- .| . -.+ .+.. + .| ...+|
T Consensus 303 gl~sf~l~~~----------------~~~~~~f~~~l~l~~~~~SlGg~~SLi~~p~~~~h~~~~~e~~~~~Gi~~~liR 366 (386)
T PF01053_consen 303 GLLSFELKGG----------------EEAARRFLDALKLFSIAPSLGGVESLISHPASTSHRSLSPEERAEAGISDGLIR 366 (386)
T ss_dssp SEEEEEESSH----------------HHHHHHHHHH-SSSEESSS-SSSS-EEEETTCTTTTTSCHHHHHHTTS-TTEEE
T ss_pred ceeEEEeccc----------------hhhhHhHHhhhhhHhhhhhcCCcccccccccchhhccCChhhhhccCCCCCeeE
Confidence 6788888663 1234566666531 11 1 011 1110 0 11 35799
Q ss_pred EEecCCCCCHHHHHHHHHHHHHHH
Q 048643 472 FAVGATLTEERHVMVAWTMVQEQL 495 (506)
Q Consensus 472 ~~~~~~~tt~edi~~li~~l~~~~ 495 (506)
+|+. -||++.|++.|++..
T Consensus 367 lSvG-----lEd~~dLi~Dl~~AL 385 (386)
T PF01053_consen 367 LSVG-----LEDPDDLIADLEQAL 385 (386)
T ss_dssp EE-------SS-HHHHHHHHHHHH
T ss_pred EEec-----cCCHHHHHHHHHHhc
Confidence 9995 348888888888765
No 262
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.61 E-value=1.4e-13 Score=138.92 Aligned_cols=330 Identities=11% Similarity=0.071 Sum_probs=184.2
Q ss_pred ccccCCCCCCHHHHHHHHHHhhcC-CCCc------ccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchH
Q 048643 95 YFAYFPSSGSIAGFLGEMLSSGFN-VVGF------NWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCE 167 (506)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~l~~~~n-~~~~------~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~ 167 (506)
.+..+++.......+.+.+.+.+. .+.. .|.......++|..+.+.++++||+++..- ..-+=.-+|+.
T Consensus 22 ~l~LiaSEN~~Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~ra~~lF~~~~~~w----~anvqp~SGs~ 97 (399)
T PF00464_consen 22 TLNLIASENYMSPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIERAKELFGAEPKEW----YANVQPHSGSQ 97 (399)
T ss_dssp SEE-CTT-----HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHHHHHHHHT-STTTE----EEE---SSHHH
T ss_pred CccccCcccccCHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHHHHHHHhCCCcccc----eEEeecCCchH
Confidence 355555554444445555555443 2222 233445778999999999999999985420 02233457899
Q ss_pred HHHHHHHHHHHHHHHhhcccCCCCeEEEeC---CCCchHHHHHHHH-------hCCCCCCeEEEecCCCCCcccCHHHHH
Q 048643 168 AILCTLTAARDRVLNKIGRENISKLVVYGS---DQTHCALQKAAQI-------VGIDLKNFRAIKTTKSSSYGLSPDSLL 237 (506)
Q Consensus 168 a~l~al~~ar~~~~~~~~~~~~~~~~v~~s---~~~H~s~~ka~~~-------~G~g~~~v~~v~~~~~~~~~~d~~~L~ 237 (506)
||+.++.+..+ ++..|+.- .-.|.|....... ... +++..++|++ ++.+|.+.++
T Consensus 98 An~av~~aLl~-----------pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~---~~~~y~~d~~-~~~ID~d~l~ 162 (399)
T PF00464_consen 98 ANLAVYMALLK-----------PGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYF---ESVPYPVDPD-TGLIDYDELE 162 (399)
T ss_dssp HHHHHHHHHT------------TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHS---EEEEEEB-TT-TSSB-HHHHH
T ss_pred HHHHHHHHHHh-----------hcCcEEecChhhcccccccccccccccccccceE---EEEeeeeecC-CCeECHHHHH
Confidence 99888777655 44444432 3356654433222 234 6778888864 5899999999
Q ss_pred HHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCcc
Q 048643 238 TQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHK 317 (506)
Q Consensus 238 ~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK 317 (506)
+.+++.+ |-+|++-. +..-..-|++++.+||++.|+++++|+||-.+++....+..-+ +.||.++.+.||
T Consensus 163 ~~a~~~k-----PklIi~G~--S~y~~~~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~P~---~~ADvvt~sThK 232 (399)
T PF00464_consen 163 KLAKEHK-----PKLIICGA--SSYPRPIDFKRFREIADEVGAYLMADISHIAGLIAGGLFPNPF---PYADVVTGSTHK 232 (399)
T ss_dssp HHHHHH-------SEEEEE---SSTSS---HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS--GC---CTSSEEEEESSG
T ss_pred HHHhhcC-----CCEEEECc--hhccCccCHHHHHHHHHhcCcEEEecccccccceehheecCcc---ccceEEEeeccc
Confidence 9998763 55666544 3344557899999999999999999999977766554444333 479999999999
Q ss_pred ccCCCCcceEEEEeCc------------hhHHhhhcCCccccCCccccCCCccCCCCccccCCCCC-CchHHHHHHHHhc
Q 048643 318 WFFTTLDCCCLWVKDP------------SALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRF-RSLKLWLVIRNYG 384 (506)
Q Consensus 318 ~l~~p~~~g~~~~r~~------------~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~-~al~~~~~l~~~G 384 (506)
.|..|- +|+++++.. ..+.+.+.. .++. +.+.+-.. ...++-.+++...
T Consensus 233 tl~GPr-ggiI~~~~~~~~~~~~~~~~~~~l~~~I~~---avfP--------------~~qg~~h~~~iaalAval~ea~ 294 (399)
T PF00464_consen 233 TLRGPR-GGIILTNKGSKNVDKKGKEIDEELAEKIDS---AVFP--------------GLQGGPHMHRIAALAVALKEAL 294 (399)
T ss_dssp GG-SSS--EEEEES-SEEEE-TTS-EEEHHHHHHHHH---HHTT--------------TT-SS--HHHHHHHHHHHHHHT
T ss_pred cccccC-ceEEEEcCCccccCCcccccHHHHHHHhcc---ccCC--------------CcccCcchhHHHHHHHHHhccc
Confidence 999996 488888711 122222211 0000 11122121 2234556666665
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHcCCCCc-----c--ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcE
Q 048643 385 VANLRHFLRSHVNMAKLFERLVASDKRVS-----P--SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKA 457 (506)
Q Consensus 385 ~~g~~~~i~~~~~~a~~l~~~l~~~~~~~-----p--~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~ 457 (506)
...+++..++..++|+.|++.|.+. ||. . ..|...+.+.+. ...+..++|.+.|+.
T Consensus 295 ~~~fk~Ya~qVv~NAk~La~~L~~~-G~~v~~ggTd~H~vlvd~~~~~~----------------~g~~a~~~Le~~gI~ 357 (399)
T PF00464_consen 295 SPEFKEYAKQVVKNAKALAEALQER-GFKVVTGGTDNHQVLVDLRSFGI----------------DGKEAEKALEEAGII 357 (399)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHT-T-EEGGGS-SSSEEEEEGGGGTS-----------------HHHHHHHHHHTTEE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhhC-CcEEEECCCCCCeEEEEeccccc----------------chHHHHHHHHhcCee
Confidence 6678999999999999999999997 777 2 666766654311 123344455555764
Q ss_pred EEeeeeEC------CEEEEEEEec---CCCCCHHHHHHHHH
Q 048643 458 YMTHAVCG------GIYAMRFAVG---ATLTEERHVMVAWT 489 (506)
Q Consensus 458 ~~~~~~~~------g~~~lR~~~~---~~~tt~edi~~li~ 489 (506)
+....+. ....||+.+. .....++|+.++.+
T Consensus 358 -vnkn~iP~d~~~~~~sGlRlGT~~lT~rG~~e~dm~~iA~ 397 (399)
T PF00464_consen 358 -VNKNTIPGDRSPFVPSGLRLGTPALTRRGMKEEDMKEIAE 397 (399)
T ss_dssp --EEE--TTTSTTTT-SEEEEESHHHHHTT--HHHHHHHHH
T ss_pred -ecccccCCCCCCCCCCEEEECCHHHHhCCCCHHHHHHHHh
Confidence 3322221 1357999972 22234456655544
No 263
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.61 E-value=5.5e-13 Score=137.79 Aligned_cols=321 Identities=13% Similarity=0.069 Sum_probs=193.6
Q ss_pred HHHHHHHHhhcCC-CCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcE--EEcCCchHHHHHHHHHHHHHHHHh
Q 048643 107 GFLGEMLSSGFNV-VGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGG--VIQGTTCEAILCTLTAARDRVLNK 183 (506)
Q Consensus 107 ~~~~~~l~~~~n~-~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g--~~t~ggt~a~l~al~~ar~~~~~~ 183 (506)
..+.+.+...... ....|....+..++.+.+.+|+.+..+...+ .... ++|+|+++|+..++.+....
T Consensus 47 ~~l~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~-----~~~i~v~iT~Ga~~al~~~~~~l~~~---- 117 (396)
T PRK09257 47 RAVKKAEARLLETETTKNYLPIEGLAAYRQAVQELLFGADSPALA-----AGRVATVQTPGGTGALRVGADFLKRA---- 117 (396)
T ss_pred HHHHHHHHHhcccccCCCcCCCCCCHHHHHHHHHHhcCCCCcccc-----cCeEEEEecCCccHHHHHHHHHHHHh----
Confidence 4566666665543 2335666677889999999998765443211 1133 89999999987776543210
Q ss_pred hcccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCC
Q 048643 184 IGRENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAIT 263 (506)
Q Consensus 184 ~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG 263 (506)
.++..|++.+.++..+..+++.+|+ +++.+|+...+++.+|++.|+++++... ....+++.+.++|+||
T Consensus 118 -----~pGd~Vlv~~P~y~~~~~~~~~~g~---~~v~v~~~~~~~~~~d~~~l~~~~~~~~---~~~~~~i~~~p~NPTG 186 (396)
T PRK09257 118 -----FPDAKVWVSDPTWPNHRAIFEAAGL---EVKTYPYYDAATKGLDFDAMLADLSQAP---AGDVVLLHGCCHNPTG 186 (396)
T ss_pred -----CCCCeEEECCCCcccHHHHHHHcCC---cEEEEeccccccCccCHHHHHHHHHhCC---CCCEEEEeCCCCCCCC
Confidence 0667899999999999999999999 9999998322347999999999887421 1134667788999999
Q ss_pred cc---cChhHHHHHHHHhCCEEEeecccccccccCc-cchhh--hcCC-CCCCeeEEcCccccCC-CCcceEEEE--eCc
Q 048643 264 AV---DPLKPLCDVAKQFGIWVHVDAAYAGSACICP-EFQHF--IDGV-EGADSFSLNAHKWFFT-TLDCCCLWV--KDP 333 (506)
Q Consensus 264 ~i---dpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~-~~~~~--~~gi-~~aDsi~~~~hK~l~~-p~~~g~~~~--r~~ 333 (506)
.+ +.+++|+++|++|++|+++|.+|.....-.. ..... +.+. ++ -.+..++.|.++. .+.+|++++ .++
T Consensus 187 ~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~-vi~i~SfSK~~~~~GlRiG~~~~~~~~~ 265 (396)
T PRK09257 187 ADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAAAGLE-LLVASSFSKNFGLYGERVGALSVVAEDA 265 (396)
T ss_pred CCCCHHHHHHHHHHHHhCCcEEEEeccccccccchHHHHHHHHHHHhcCCc-EEEEEEcCCcCccccccceeEEEEeCCH
Confidence 99 4578899999999999999999976542101 01111 1111 11 1345678999986 688999874 343
Q ss_pred hhHHhhhcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHh--c------hhHHHHHHHHHHHHHHHHHHH
Q 048643 334 SALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNY--G------VANLRHFLRSHVNMAKLFERL 405 (506)
Q Consensus 334 ~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--G------~~g~~~~i~~~~~~a~~l~~~ 405 (506)
..+......-....... ..+. ..+....+.+.+ + .+.++++.++..+..+.+.+.
T Consensus 266 ~~~~~~~~~~~~~~~~~--------------~~~~---~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~rr~~l~~~ 328 (396)
T PRK09257 266 EEADRVLSQLKATIRTN--------------YSNP---PAHGAAIVATILNDPELRAEWEAELEEMRERIKAMRQLLVEA 328 (396)
T ss_pred HHHHHHHHHHHHHhhhh--------------cCCC---cHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 32211111000000000 0000 011111122222 1 233555677778888889899
Q ss_pred HHcCC---CCc---c-ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCC
Q 048643 406 VASDK---RVS---P-SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATL 478 (506)
Q Consensus 406 l~~~~---~~~---p-~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~ 478 (506)
|++.. +++ | +-..+++.-+ . +.+.+.+.+.|+ ++.+. + |+++++
T Consensus 329 L~~~~~~~~~~~~~p~gg~~~w~~l~----------------~---~~~~~l~~~~~V-~~~p~---~----ri~~~~-- 379 (396)
T PRK09257 329 LKAKGPSRDFDFIARQRGMFSYSGLT----------------P---EQVDRLREEFGV-YAVGS---G----RINVAG-- 379 (396)
T ss_pred HHhcCCCCCcccccccceEEEecCCC----------------H---HHHHHHHHcCCE-EEcCC---C----eEEEee--
Confidence 88762 244 4 3222222211 1 222333344565 44431 2 999854
Q ss_pred CCHHHHHHHHHHHHHH
Q 048643 479 TEERHVMVAWTMVQEQ 494 (506)
Q Consensus 479 tt~edi~~li~~l~~~ 494 (506)
.++++|+++++.|+++
T Consensus 380 ~~~~~i~~~~~~i~~~ 395 (396)
T PRK09257 380 LNESNIDYVAEAIAAV 395 (396)
T ss_pred CCHHHHHHHHHHHHhh
Confidence 5777999999998764
No 264
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.61 E-value=4.3e-13 Score=135.21 Aligned_cols=272 Identities=11% Similarity=0.036 Sum_probs=171.3
Q ss_pred HHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCCC
Q 048643 136 IVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGIDL 215 (506)
Q Consensus 136 ~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~ 215 (506)
++.+.+++.+|.+.. ..++|+|+++++..++. +.. ++.+|+. ..++......++..|.
T Consensus 44 ~lr~~ia~~~~~~~~-------~I~it~Gs~~~l~~~~~-~~~-----------~~~vv~~-~P~y~~y~~~~~~~G~-- 101 (332)
T PRK06425 44 DIEDQIKIYTQGLKI-------KVLIGPGLTHFIYRLLS-YIN-----------VGNIIIV-EPNFNEYKGYAFTHGI-- 101 (332)
T ss_pred HHHHHHHHHhCCCcc-------eEEECCCHHHHHHHHHH-HhC-----------CCcEEEe-CCChHHHHHHHHHcCC--
Confidence 344567788888765 68889998888765553 211 3334444 7899999999999999
Q ss_pred CCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC---hhHHHHHHHHhCCEEEeeccccccc
Q 048643 216 KNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSA 292 (506)
Q Consensus 216 ~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp---l~~I~~ia~~~g~~lhVDaA~gg~~ 292 (506)
+++.||++. ..+|.+.+++ . .+.+|+++.++|+||.+-+ +++|+++|+++|+|+++|.+|+-+.
T Consensus 102 -~v~~vp~~~---~~~~~~~l~~----~-----~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~ 168 (332)
T PRK06425 102 -RISALPFNL---INNNPEILNN----Y-----NFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFIDFV 168 (332)
T ss_pred -eEEEEeCCc---ccCcHHHHhh----c-----CCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchhccc
Confidence 999999874 3556655542 1 2336777899999999855 6778888899999999999997654
Q ss_pred ccC-ccchhhhcCCCCCCe-eEEcCccccC-CCCcceEEEEeCchhHHhhhcC-CccccCCccccCCCccCCCCccccCC
Q 048643 293 CIC-PEFQHFIDGVEGADS-FSLNAHKWFF-TTLDCCCLWVKDPSALVSSLST-NPEYLKNKATESKQVVDYKDWQITLS 368 (506)
Q Consensus 293 ~~~-~~~~~~~~gi~~aDs-i~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~s 368 (506)
.-. +........ .-.. +..++.|.++ ...-+|+++... +. .+.+.. ..++ .+
T Consensus 169 ~~~~~~~~~~~~~--~~~vi~~~SfSK~~~l~GlRiGy~v~~~-~l-i~~l~~~~~~~-----------------~~--- 224 (332)
T PRK06425 169 PNRAEEDVLLNRS--YGNVIIGRSLTKILGIPSLRIGYIATDD-YN-MKISRKITEPW-----------------SV--- 224 (332)
T ss_pred cccchhHHHHhcc--CCCEEEEeecHHhcCCchhhheeeecCH-HH-HHHHHHcCCCC-----------------cc---
Confidence 211 011111111 1123 4456899998 446688877643 32 223321 1111 11
Q ss_pred CCCCchHHHHHHHHhchhH-HHHHHHHHHHHHHHHHHHHHcCCCCc----c--ceEEEeecCCCcccccccccchHHHHH
Q 048643 369 RRFRSLKLWLVIRNYGVAN-LRHFLRSHVNMAKLFERLVASDKRVS----P--SAVMDKLKPKYENCHSQQLVTEEEAIN 441 (506)
Q Consensus 369 r~~~al~~~~~l~~~G~~g-~~~~i~~~~~~a~~l~~~l~~~~~~~----p--~~v~f~~~~~~~~~~~~~~~~~~~~~~ 441 (506)
.... ...+.....+. .++..+...+..+++.+.|++. +++ | +.+.+++. .
T Consensus 225 ---~~~~-~~~l~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~~~~~g~f~~~~~~-~----------------- 281 (332)
T PRK06425 225 ---CDPA-IDFIRSIDLDYVAKHSLDIMENERSYLINNLEAM-GFRAAGDPSANFITFMIP-D----------------- 281 (332)
T ss_pred ---CHHH-HHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHC-CCEECCCCCceEEEEEcC-C-----------------
Confidence 0111 11222222223 3566777788888999999887 564 3 55566543 2
Q ss_pred HHHHHHHHHHHhcCcEEEeeeeEC--CEEEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 048643 442 EFNRELLESINASGKAYMTHAVCG--GIYAMRFAVGATLTEERHVMVAWTMVQEQL 495 (506)
Q Consensus 442 ~~~~~l~~~l~~~g~~~~~~~~~~--g~~~lR~~~~~~~tt~edi~~li~~l~~~~ 495 (506)
..++.+.+.+.|+.......+. +..++|+++. +.++.++++++|+++.
T Consensus 282 --~~~~~~~l~~~gi~v~~~~~f~~~~~~~iRis~~----~~~~~~~l~~al~~~~ 331 (332)
T PRK06425 282 --AHDFYSYLLKNGILVRLLDDYECLGEQYIRIAIR----RRSFNIKLVNALRNFL 331 (332)
T ss_pred --HHHHHHHHHHCCeEEEECCCCCCCCCCEEEEEeC----CHHHHHHHHHHHHHHh
Confidence 2456677777786544443332 3469999985 5679999999998753
No 265
>PRK05839 hypothetical protein; Provisional
Probab=99.61 E-value=6.4e-13 Score=136.21 Aligned_cols=311 Identities=12% Similarity=0.053 Sum_probs=183.4
Q ss_pred HHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHH-HHHHhhc
Q 048643 107 GFLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARD-RVLNKIG 185 (506)
Q Consensus 107 ~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~-~~~~~~~ 185 (506)
..+.+.+....+. ...|....+..++.+.+.+|+++.+|.+.+. ...++|+|+++++...+.+... .
T Consensus 40 ~~~~~a~~~~~~~-~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~~-----~~I~it~G~~~al~~~~~~~~~~~------ 107 (374)
T PRK05839 40 KFIQDALKNNAHL-LNKYPKSAGEESLREAQRGFFKRRFKIELKE-----NELIPTFGTREVLFNFPQFVLFDK------ 107 (374)
T ss_pred HHHHHHHHHHhhc-cCCCCCCCCCHHHHHHHHHHHHHHhCCCCCc-----ceEEEecCcHHHHHHHHHHHhcCC------
Confidence 3445555443322 3345444456789999999999998864321 2788899888777555444321 1
Q ss_pred ccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc
Q 048643 186 RENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV 265 (506)
Q Consensus 186 ~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i 265 (506)
++..|+++..++..+...++..|+ +++.+|.+.++++.+|++..+ +. . +.+|+++.++|+||.+
T Consensus 108 ----~gd~vlv~~P~y~~~~~~~~~~g~---~v~~v~~~~~~~~~~d~~~~~--~~-~------~k~v~i~nP~NPTG~~ 171 (374)
T PRK05839 108 ----QNPTIAYPNPFYQIYEGAAIASRA---KVLLMPLTKENDFTPSLNEKE--LQ-E------VDLVILNSPNNPTGRT 171 (374)
T ss_pred ----CCCEEEECCCCchhhHHHHHhcCC---EEEEeecccccCCcCCcchhh--hc-c------ccEEEEeCCCCCcCcc
Confidence 456788888999999999999999 999999976555677765432 21 1 3367778999999999
Q ss_pred c---ChhHHHHHHHHhCCEEEeecccccccccCccchhhhc-----CCCC-CC-eeEEcCcccc-CCCCcceEEEEeCch
Q 048643 266 D---PLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFID-----GVEG-AD-SFSLNAHKWF-FTTLDCCCLWVKDPS 334 (506)
Q Consensus 266 d---pl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~-----gi~~-aD-si~~~~hK~l-~~p~~~g~~~~r~~~ 334 (506)
- .+++|+++|++||+|+++|.+|+.... .+.....+. +... -. .+..++.|.+ ....-+|+++.. +.
T Consensus 172 ~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~-~~~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~ii~~-~~ 249 (374)
T PRK05839 172 LSLEELIEWVKLALKHDFILINDECYSEIYE-NTPPPSLLEASILVGNESFKNVLVINSISKRSSAPGLRSGFIAGD-AS 249 (374)
T ss_pred cCHHHHHHHHHHHHHcCCEEEeccchhhccc-CCCCCCHhhhhcccCccccCcEEEEeccccccCCccceeEEEecC-HH
Confidence 4 477888889999999999999976421 111111111 0000 11 3456688975 455778888763 33
Q ss_pred hHHhhhcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHh-chhHHHHHHHHHHHHHHHHHHHHHcCCCCc
Q 048643 335 ALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNY-GVANLRHFLRSHVNMAKLFERLVASDKRVS 413 (506)
Q Consensus 335 ~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~-G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~ 413 (506)
. .+.+.....++.. ++ ..+...++...+ ..+.++++.++..++.+.+.+.| ++.
T Consensus 250 ~-~~~~~~~~~~~~~-----------------~~---~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l----~~~ 304 (374)
T PRK05839 250 I-LKKYKAYRTYLGC-----------------AS---PLPLQKAAAVAWLDDEHAEFFRNIYAKNLKLAREIL----GIT 304 (374)
T ss_pred H-HHHHHHHHhhcCC-----------------CC---ChHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHhc----CCC
Confidence 2 2223211111100 00 111111111122 23445555666666666666554 222
Q ss_pred -c---ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHh-cCcEEEeeeeEC----CEEEEEEEecCCCCCHHHH
Q 048643 414 -P---SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINA-SGKAYMTHAVCG----GIYAMRFAVGATLTEERHV 484 (506)
Q Consensus 414 -p---~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~----g~~~lR~~~~~~~tt~edi 484 (506)
| ..+.+++.+ ..++.+++.+ .|+....+..+. +..++|++++. +++++
T Consensus 305 ~p~gg~fi~~~~~~--------------------~~~~~~~l~~~~gi~v~pg~~f~~~~~~~~~iRis~~~---~~~~~ 361 (374)
T PRK05839 305 IPPATFYVWLPVDN--------------------DEEFTKKLYQNEGIKVLPGSFLGRNGIGKGYVRIALVY---DTPKL 361 (374)
T ss_pred CCCeeEEEEEeCCC--------------------hHHHHHHHHHHCCEEEeCchhhCCCCCCCCeEEEEecC---CHHHH
Confidence 4 344444422 1345566654 676444332222 24799999952 57789
Q ss_pred HHHHHHHHHHH
Q 048643 485 MVAWTMVQEQL 495 (506)
Q Consensus 485 ~~li~~l~~~~ 495 (506)
.+.++.|.++.
T Consensus 362 ~~~l~~l~~~l 372 (374)
T PRK05839 362 EKALEIIKTYL 372 (374)
T ss_pred HHHHHHHHHHh
Confidence 98888887764
No 266
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.61 E-value=1e-12 Score=133.90 Aligned_cols=283 Identities=13% Similarity=0.086 Sum_probs=175.9
Q ss_pred hhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHH
Q 048643 128 PAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKA 207 (506)
Q Consensus 128 p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka 207 (506)
+....+.+.+ ++.++++.+ ..++|+|+++++..++.+..+ ++..|++...++......
T Consensus 65 ~~~~~lr~~i----a~~~~~~~~-------~I~it~G~~~al~~~~~~~~~-----------~gd~V~v~~P~y~~~~~~ 122 (357)
T PRK14809 65 ASHADLTAAL----ADRWDVSPE-------QVWLANGGDGALDYLARAMLD-----------PGDTVLVPDPGFAYYGMS 122 (357)
T ss_pred CCHHHHHHHH----HHHhCCCcc-------eEEECCCHHHHHHHHHHHhcC-----------CCCEEEEeCCChHHHHHH
Confidence 3445555554 455577654 788999998887666554432 566788888888777778
Q ss_pred HHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHh--CCEEEee
Q 048643 208 AQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQF--GIWVHVD 285 (506)
Q Consensus 208 ~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~--g~~lhVD 285 (506)
+...|. +++.+|++.++++.+|.+++++.+. . +.+|+++.++|+||.+-+.+++.++++.. ++++++|
T Consensus 123 ~~~~g~---~~~~~~l~~~~~~~~~~~~~~~~~~-~------~k~i~l~~p~NPTG~~~s~~~~~~l~~~~~~~~~iI~D 192 (357)
T PRK14809 123 ARYHHG---EVREYPVSKADDFEQTADTVLDAYD-G------ERIVYLTSPHNPTGSEIPLDEVEALAERTDEETLVVVD 192 (357)
T ss_pred HHHcCC---eEEEEecccCcCCCcCHHHHHHhhc-C------CcEEEEeCCCCCCCcCCCHHHHHHHHHhCccCcEEEEe
Confidence 888899 8999998654457888888777642 1 23677789999999998887777777654 7899999
Q ss_pred cccccccccCccchhhhcCCCCCCee-EEcCccccC-CCCcceEEEEeCchhHHhhhcC-CccccCCccccCCCccCCCC
Q 048643 286 AAYAGSACICPEFQHFIDGVEGADSF-SLNAHKWFF-TTLDCCCLWVKDPSALVSSLST-NPEYLKNKATESKQVVDYKD 362 (506)
Q Consensus 286 aA~gg~~~~~~~~~~~~~gi~~aDsi-~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~ 362 (506)
.+|+.+.. .+.....+.. .-..+ ..++.|.++ ....+|+++..+. .+ +.+.. ...+
T Consensus 193 e~y~~~~~-~~~~~~~~~~--~~~vi~~~SfSK~~~~~GlRiG~~~~~~~-~~-~~~~~~~~~~---------------- 251 (357)
T PRK14809 193 EAYGEFAE-RPSAVALVEE--RDDVAVLRTFSKAYGLAGLRLGYAVVPEE-WA-DAYARVNTPF---------------- 251 (357)
T ss_pred chhhhccC-CchhHHHHhh--CCCEEEEecchhHhcCcchhheeeecCHH-HH-HHHHHhCCCC----------------
Confidence 99976432 1111111110 11233 456889997 4577888877532 22 22321 1000
Q ss_pred ccccCCCCCCchHHHHHHHHhc-hhHHHHHHHHHHHHHHHHHHHHHcCCCCcc--ceEEEeecCCCcccccccccchHHH
Q 048643 363 WQITLSRRFRSLKLWLVIRNYG-VANLRHFLRSHVNMAKLFERLVASDKRVSP--SAVMDKLKPKYENCHSQQLVTEEEA 439 (506)
Q Consensus 363 ~~~~~sr~~~al~~~~~l~~~G-~~g~~~~i~~~~~~a~~l~~~l~~~~~~~p--~~v~f~~~~~~~~~~~~~~~~~~~~ 439 (506)
. ...+..++++..+. .+.+++..+...+..+++.+.|... .+.+ +.+.+++. .
T Consensus 252 -~------~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~g~f~~~~~~-~--------------- 307 (357)
T PRK14809 252 -A------ASELACRAGLAALDDDEHVERTVETARWAREYIREELDAP-TWESAGNFVLAEVG-D--------------- 307 (357)
T ss_pred -C------CCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhcCc-cCCCCCCEEEEECC-C---------------
Confidence 0 12233444555443 3345555666666667777777543 2323 55555542 1
Q ss_pred HHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 048643 440 INEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQL 495 (506)
Q Consensus 440 ~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~ 495 (506)
..++.+.+.+.|+.+..+..+....++|+++. +.++++++++.|+++.
T Consensus 308 ----~~~~~~~l~~~gv~v~~g~~f~~~~~iRls~~----~~~~~~~~l~~L~~~l 355 (357)
T PRK14809 308 ----ASAVAEAAQERGVIVRDCTSFGLPECIRITCG----TREETERAVEVLNEVL 355 (357)
T ss_pred ----HHHHHHHHHHCCEEEEECccCCCCCeEEEecC----CHHHHHHHHHHHHHHh
Confidence 13456666677765444433333468999974 3579999999988764
No 267
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.60 E-value=4.2e-13 Score=127.09 Aligned_cols=308 Identities=16% Similarity=0.105 Sum_probs=212.3
Q ss_pred hhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHH-HHHHHHHHHHhhcccCCCCeEEEeCCCCc-----
Q 048643 128 PAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCT-LTAARDRVLNKIGRENISKLVVYGSDQTH----- 201 (506)
Q Consensus 128 p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~a-l~~ar~~~~~~~~~~~~~~~~v~~s~~~H----- 201 (506)
+....+-..+.+.++.++|.... +.+++.+.| .|+.- |.++.... .+..|++++...
T Consensus 72 ~~W~~lp~~lgdklApLiGA~~~-------Evvv~dtts-~nl~k~L~aalr~~---------~~r~vIv~E~~~fpTdl 134 (407)
T COG3844 72 ADWFDLPERLGDKLAPLIGARAG-------EVVVTDTTS-INLFKVLAAALRPQ---------EGRRVIVSEGDNFPTDL 134 (407)
T ss_pred CchhhchhHHHHHhhhhhcCCCC-------ceEEeCCcc-hHHHHHHHHHhccC---------CCceEEeecCCCCCcch
Confidence 34456667788999999999875 566666644 55544 44433220 233455554332
Q ss_pred hHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCE
Q 048643 202 CALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIW 281 (506)
Q Consensus 202 ~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~ 281 (506)
|..+..+.++|.|.+ + .+.+.+++++++++++++ +|++++...-||..-++.+|.+++|++|+.
T Consensus 135 y~a~g~~~~~~~~~~-~---------~~~~~P~~~~~~~~dd~A------vV~L~~V~y~TGql~dm~aiT~~AH~~gal 198 (407)
T COG3844 135 YIAEGLADLLGIGYD-L---------EGVIAPRALEEAITDDVA------VVLLSHVNYKTGQLLDMRAITALAHQHGAL 198 (407)
T ss_pred hhhcchhhhhccccc-c---------eeeeChHHHHHhhccceE------EEEeccccccccceeeHHHHHHHHHhcCce
Confidence 345556677777421 1 246678899999999876 899999999999999999999999999999
Q ss_pred EEeecccccccccCccchhhhcCCCCCCeeEEcCccccC-CCCcceEEEEeCchhHHhhhcCCccccCCccccCCC---c
Q 048643 282 VHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFF-TTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQ---V 357 (506)
Q Consensus 282 lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~---~ 357 (506)
+.-|=||..+.+..+-.+. ++|.-.++.||+|+ .|-+.+++++.++.. ......-..++.+....... .
T Consensus 199 v~wDLAHsaGavp~~Lh~~------gaDfaigcsyKYLNgGPGapa~l~v~~~h~-e~~~~~lsgW~gha~pf~m~~~y~ 271 (407)
T COG3844 199 VGWDLAHSAGAVPVDLHAA------GADFAIGCSYKYLNGGPGAPAGLFVAPRHR-ERSWPPLSGWWGHARPFAMEEVYA 271 (407)
T ss_pred EEeehhcccCCcceeeccc------CCCeeeeeeceeccCCCCCceeEEeccccc-cccccccccccCCCCcchhhhccC
Confidence 9999999999887765443 89999999999998 666678888865432 12223333444332110000 0
Q ss_pred cCCCCccccCCCC--CCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCC---CCc---c-------ceEEEeec
Q 048643 358 VDYKDWQITLSRR--FRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDK---RVS---P-------SAVMDKLK 422 (506)
Q Consensus 358 ~~~~~~~~~~sr~--~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~---~~~---p-------~~v~f~~~ 422 (506)
...+-..+.|+.. .....+-.+|-.++.-++.++.++...++.||.+.++..- +++ | +.|+|...
T Consensus 272 p~~ga~rf~~gt~~V~s~aal~~aLDifa~~~i~~lR~kSlaLTd~fieLvEa~~~~~~l~l~tPr~~~~rGsqvS~~hp 351 (407)
T COG3844 272 PGPGARRFLCGTQPVLSLAALEGALDIFADVDITELRKKSLALTDYFIELVEARCEYYGLTLVTPRAHEERGSQVSLYHP 351 (407)
T ss_pred cCccccceeeCCcchhhhHHHhhhhhhhhhcCHHHHHHhhhHHHHHHHHHHHhccccCCcEEeccchhhhccceeeEecC
Confidence 0011111122221 1224555667777788899999999999999999998753 233 4 77888764
Q ss_pred CCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 048643 423 PKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAFL 499 (506)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l~ 499 (506)
. ..++.+.|.++|++ + .++...++|+.++-.+++-+||=..++.|+++.+++.
T Consensus 352 ~--------------------~~~V~qaLi~rGVi--g--D~R~P~vlRfgftPlY~~~~DVw~AV~~L~evL~t~a 404 (407)
T COG3844 352 H--------------------GYQVMQALIDRGVI--G--DFREPDVLRFGFTPLYVSFVDVWDAVDALEEVLDTLA 404 (407)
T ss_pred c--------------------HHHHHHHHHHcCcc--c--cccCCCeeeecCccceechhHHHHHHHHHHHHHHhhc
Confidence 2 36777888888984 2 3455679999999999999999999999999887653
No 268
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.60 E-value=1.9e-12 Score=131.68 Aligned_cols=340 Identities=13% Similarity=0.136 Sum_probs=196.8
Q ss_pred CccccCCCCCCHHHHHHH-HHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHH
Q 048643 94 NYFAYFPSSGSIAGFLGE-MLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCT 172 (506)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~-~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~a 172 (506)
-|......+.+ .+.... |....... ..|..+|...+||+. +++++|++ ..+.+++||.|...+
T Consensus 39 v~iDLltDsgT-~aMs~~q~a~~~~GD--e~yag~~s~~~lE~~----va~~~G~~---------~av~v~sGT~Al~ll 102 (450)
T TIGR02618 39 VYIDLLTDSGT-NAMSDKQWAGLMMGD--EAYAGSRNFYHLERT----VRELYGFK---------YVVPTHQGRGAENLL 102 (450)
T ss_pred eEEEcccCCCc-HHHHHHHHHHhhhcc--hhhcCCCcHHHHHHH----HHHHHCCC---------eEEEcCCHHHHHHHH
Confidence 45556554444 333333 33333322 358899999999976 56677776 468999999995432
Q ss_pred HHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHH-HHHhCCCCCCeEEEecC--------CCCCcccCHHHHHHHHHHH
Q 048643 173 LTAARDRVLNKIGRENISKLVVYGSDQTHCALQKA-AQIVGIDLKNFRAIKTT--------KSSSYGLSPDSLLTQINLD 243 (506)
Q Consensus 173 l~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka-~~~~G~g~~~v~~v~~~--------~~~~~~~d~~~L~~~i~~~ 243 (506)
. .+. ++ ++.+| +...|+...++ +...|. .++-++.+ ...+|.||+++|+++|++.
T Consensus 103 ~-~l~---l~-------pGDeV--psn~~f~Tt~ahIe~~Ga---v~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~ 166 (450)
T TIGR02618 103 S-QIA---IK-------PGDYV--PGNMYFTTTRYHQEKNGA---TFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEV 166 (450)
T ss_pred H-HhC---CC-------CcCEE--CCceeHHHHHHHHHhCCe---EEEeeecccccccccCCCCCCCcCHHHHHHHhccc
Confidence 2 111 11 44455 55788777776 677777 66666443 1235899999999999853
Q ss_pred HhcCCccEEEEEeccCCCC-Ccc---cChhHHHHHHHHhCCEEEeeccccc-ccccCc----cch-----hhhcC-CCCC
Q 048643 244 VEAGLVPLFLCATIGTTAI-TAV---DPLKPLCDVAKQFGIWVHVDAAYAG-SACICP----EFQ-----HFIDG-VEGA 308 (506)
Q Consensus 244 ~~~g~~p~~Vv~t~gtt~t-G~i---dpl~~I~~ia~~~g~~lhVDaA~gg-~~~~~~----~~~-----~~~~g-i~~a 308 (506)
.. ...+ +|+++...+.. |.. +++++|.++|++||+++|.|||+.. .+.+.. .+. ..... .+.+
T Consensus 167 ~~-~~~~-lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~a 244 (450)
T TIGR02618 167 GA-DKIP-YICLAVTVNLAGGQPVSMANMREVRELCEAHGIKVFYDATRCVENAYFIKEREQGYEDKSIAEILKEMMSYA 244 (450)
T ss_pred cC-cccC-ceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEEEEEccchhhChhhhhcccccccCCCHHHHHHHHhccC
Confidence 21 1233 45555555544 666 6799999999999999999999866 333321 111 11111 3489
Q ss_pred CeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHH
Q 048643 309 DSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANL 388 (506)
Q Consensus 309 Dsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~ 388 (506)
|++++++||-+++|. .|++.+++++.+.++-.....| .. +..++.-.+|... ++-.+|...- -
T Consensus 245 D~~~~S~~Kd~~~~~-GG~l~~~d~~l~~k~r~~~~~~-eG----------~~tyGgla~r~~~--ala~gL~e~~---~ 307 (450)
T TIGR02618 245 DGCTMSGKKDCLVNI-GGFLCMNDDEMFQSAKELVVVF-EG----------MPSYGGLAGRDME--AMAIGIREAV---D 307 (450)
T ss_pred cEEEEeeccCCCCCC-ceEEEeCCHHHHHHHHHHhhhc-CC----------ccccCchhhhhHH--HHHHHHHHhh---h
Confidence 999999999999998 4667778877655433222122 10 1111111112111 1122333211 1
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCc---c---ceEEEeec---CCCcccccccccchHHHHHHHHHHHHHHHHh-cCcEE
Q 048643 389 RHFLRSHVNMAKLFERLVASDKRVS---P---SAVMDKLK---PKYENCHSQQLVTEEEAINEFNRELLESINA-SGKAY 458 (506)
Q Consensus 389 ~~~i~~~~~~a~~l~~~l~~~~~~~---p---~~v~f~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~ 458 (506)
+..+++....+++|.+.|.+. |+. | +.|.+... |.- ..+ .--.+.|...|.. .|+=-
T Consensus 308 ~~y~~~r~~~a~~La~~L~~~-Gvpv~~p~ggh~V~vda~~~lph~----------~~~--~~p~~al~~~ly~~~gir~ 374 (450)
T TIGR02618 308 YEYIEHRVKQVRYLGDKLKAA-GVPIVEPVGGHAVFLDARRFLPHI----------PQD--QFPAQSLAASIYVETGVRS 374 (450)
T ss_pred HHHHHHHHHHHHHHHHHHHHC-CCcccCCCCcceEEEEhHHhCCCC----------Chh--hChHHHHHHHHHHHhCccE
Confidence 255677777899999999988 775 4 55555432 210 000 0012334444433 34311
Q ss_pred EeeeeE-------------CCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 048643 459 MTHAVC-------------GGIYAMRFAVGATLTEERHVMVAWTMVQEQLEA 497 (506)
Q Consensus 459 ~~~~~~-------------~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~ 497 (506)
+--+.+ ..-..+|+++-----|.+++|.+.+.|..+.++
T Consensus 375 ~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~ 426 (450)
T TIGR02618 375 MERGIVSAGRNNVTGEHHRPKLELVRLTIPRRVYTYAHMDVVADGIIKLYKH 426 (450)
T ss_pred EeecceecccCCCCCcccCCccceeeeccccccccHhHHHHHHHHHHHHHhh
Confidence 111111 113579999843334567999999999887654
No 269
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.60 E-value=7.5e-13 Score=135.27 Aligned_cols=303 Identities=12% Similarity=0.058 Sum_probs=180.7
Q ss_pred HHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCC-CccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcc
Q 048643 108 FLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLP-KSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGR 186 (506)
Q Consensus 108 ~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~-~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~ 186 (506)
.+.+.+....+. ..|....+..++.+.+.+|+.+.+|.+ .+. ...++|+|+++++..++.+..-.
T Consensus 44 ~~~~~~~~~~~~--~~Y~~~~G~~~lr~~ia~~l~~~~~~~~~~~-----~~I~it~G~~~~i~~~~~~l~~~------- 109 (364)
T PRK07865 44 VIQEALAAAADA--PGYPTTAGTPELREAIVGWLARRRGVTGLDP-----AAVLPVIGSKELVAWLPTLLGLG------- 109 (364)
T ss_pred HHHHHHHHHHhh--CCCCCccCCHHHHHHHHHHHHHHcCCCCCCc-----ccEEEccChHHHHHHHHHHHcCC-------
Confidence 344444443322 245555567789999999999988865 321 27889999888876544333111
Q ss_pred cCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc-
Q 048643 187 ENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV- 265 (506)
Q Consensus 187 ~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i- 265 (506)
++..|+++..+|..+..+++.+|. +++.++. ++++++ ..+.+|+++.++|+||.+
T Consensus 110 ---~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~~~~---------~~~l~~---------~~~~~v~~~~p~NPtG~~~ 165 (364)
T PRK07865 110 ---PGDVVVIPELAYPTYEVGARLAGA---TVVRADS---------LTELGP---------QRPALIWLNSPSNPTGRVL 165 (364)
T ss_pred ---CCCEEEECCCCcccHHHHHHhcCC---EEEecCC---------hhhCCc---------ccceEEEEcCCCCCCCccC
Confidence 566788899999999999999999 7777642 223221 124477777899999988
Q ss_pred --cChhHHHHHHHHhCCEEEeecccccccccCccch---hhhcCCC-CCCeeEEcCccccCCC-CcceEEEEeCchhHHh
Q 048643 266 --DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQ---HFIDGVE-GADSFSLNAHKWFFTT-LDCCCLWVKDPSALVS 338 (506)
Q Consensus 266 --dpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~---~~~~gi~-~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~ 338 (506)
+.+++|+++|++||+|+++|.+|+....-.+... ....+.. .-..++.++.|.++.| ..+|+++. +++.. +
T Consensus 166 ~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~i~~-~~~~~-~ 243 (364)
T PRK07865 166 GVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGDHTGLLAVHSLSKQSNLAGYRAGFVAG-DPALV-A 243 (364)
T ss_pred CHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCccccccccCCccceEEEEeechhccCCCceeeEEEec-CHHHH-H
Confidence 4578899999999999999999975432111000 0000000 1125567799998644 55777654 33332 2
Q ss_pred hhcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhc-hhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c
Q 048643 339 SLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYG-VANLRHFLRSHVNMAKLFERLVASDKRVS---P 414 (506)
Q Consensus 339 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G-~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p 414 (506)
.+.....+... . ...+...++.+.+. .+.+++..+...+..+.+.+.|++. ++. |
T Consensus 244 ~~~~~~~~~~~--------------~------~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~ 302 (364)
T PRK07865 244 ELLEVRKHAGM--------------M------VPAPVQAAMVAALGDDAHVREQRERYARRRAVLRPALEAA-GFRVDHS 302 (364)
T ss_pred HHHHHHHhcCC--------------C------cCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHc-CCcccCC
Confidence 22111001000 0 01111122223332 2345666777778888899999886 665 4
Q ss_pred --ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeEC--CEEEEEEEecCCCCCHHHHHHHHHH
Q 048643 415 --SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCG--GIYAMRFAVGATLTEERHVMVAWTM 490 (506)
Q Consensus 415 --~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--g~~~lR~~~~~~~tt~edi~~li~~ 490 (506)
+.+ +++.... + ...+.+.+.+.|+....+..+. +..++|++++. +++++++.++.
T Consensus 303 ~~~~~-~~~~~~~---------------~--~~~~~~~l~~~gv~v~pg~~f~~~~~~~iRi~~~~---~~~~~~~~~~~ 361 (364)
T PRK07865 303 EAGLY-LWATRGE---------------D--CWDTVAWLAERGILVAPGDFYGPAGAQHVRVALTA---TDERIAAAVER 361 (364)
T ss_pred CccEE-EEEeCCC---------------C--HHHHHHHHHHCCEEEeCccccCcCCCCEEEEEecC---CHHHHHHHHHH
Confidence 332 2222110 0 1345566677787544433222 35799999964 47799999887
Q ss_pred HH
Q 048643 491 VQ 492 (506)
Q Consensus 491 l~ 492 (506)
|+
T Consensus 362 l~ 363 (364)
T PRK07865 362 LA 363 (364)
T ss_pred hh
Confidence 74
No 270
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.60 E-value=2.2e-12 Score=135.67 Aligned_cols=208 Identities=10% Similarity=0.064 Sum_probs=134.9
Q ss_pred HHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHH-HHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHh
Q 048643 105 IAGFLGEMLSSGFNVVGFNWISSPAATELENIVMDWL-GQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNK 183 (506)
Q Consensus 105 ~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~l-a~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~ 183 (506)
++..+-++..+... ..|...++..++.+++++++ .+.++..... ......++|+|+++++..++.+.....+-.
T Consensus 114 ~~~~v~e~~~~~~~---~~Y~~~~g~~~lreaia~~~~~~~~~~~~~~--~~~~~I~vT~Ga~~al~~~~~aL~~~~ll~ 188 (527)
T PRK09275 114 ADEFVYELVDGIIG---DNYPVPDRMLKHTEKIVKDYLRQEMCGGRPP--KGEFDLFAVEGGTAAMCYIFDSLKENGLLK 188 (527)
T ss_pred CCHHHHHHHHHHhc---CCCCCCCCCHHHHHHHHHHHHHhhccCCCCC--CCcCeEEEeCCHHHHHHHHHHHHhhhhcCC
Confidence 35555555544433 24777777888888888744 4433321100 000168999999999887776532211111
Q ss_pred hcccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCC
Q 048643 184 IGRENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAIT 263 (506)
Q Consensus 184 ~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG 263 (506)
+++.|+++..++..+...+++.|.+. .++.++.+++++|.+|++.|++++++.++ +|+++.++|+||
T Consensus 189 ------pGD~Vlv~~P~y~~Y~~~~~l~g~~~-~~v~v~~~~~~~f~~d~~~l~~~~~~~tk------ai~l~nP~NPTG 255 (527)
T PRK09275 189 ------AGDKIALMTPIFTPYLEIPELPRYDL-EVVHINADEENEWQYPDSELEKLRDPSIK------ALFLVNPSNPPS 255 (527)
T ss_pred ------CCCEEEEeCCChHHHHHHHHHcCCCe-EEEEeecCcccCCCCCHHHHHhhcCCCCC------EEEEeCCcCCcC
Confidence 66788889899999999988887621 44555555545689999999997765433 788889999999
Q ss_pred cccC---hhHHHHHHHH--hCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCC-CCcceEEEEeCc
Q 048643 264 AVDP---LKPLCDVAKQ--FGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFT-TLDCCCLWVKDP 333 (506)
Q Consensus 264 ~idp---l~~I~~ia~~--~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~-p~~~g~~~~r~~ 333 (506)
.+-+ +++|+++|++ +++|+++|.+|+-+.. .+.........--.+..++.|.+++ .+-.|+++..+.
T Consensus 256 ~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~---~~~s~~~~~~~~~I~v~SfSK~f~mtG~RlG~i~~~~~ 328 (527)
T PRK09275 256 VAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVD---DFRSLFAVLPYNTILVYSFSKYFGATGWRLGVIALHED 328 (527)
T ss_pred CCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhcc---cccCHHHhCCCCEEEEeehhhhccCcHhHHhhhhcCch
Confidence 9965 7888889965 4999999999976431 2222211111112344567899974 466888776654
No 271
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.59 E-value=3.9e-12 Score=131.71 Aligned_cols=300 Identities=9% Similarity=0.055 Sum_probs=177.2
Q ss_pred HHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCC-chHHHHHHHH
Q 048643 132 ELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQT-HCALQKAAQI 210 (506)
Q Consensus 132 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~-H~s~~ka~~~ 210 (506)
....++.+.|++++|.+ ..+++++|++||..|+..+|....++.+... ++.+|++...+ |-+..-+..+
T Consensus 79 ~~~~~l~~~l~~~~~~~---------~~~~~~SGs~A~e~ai~~a~~~~~~~~~~~~-~~~~i~~~~~~yhg~~~~~~~~ 148 (401)
T TIGR01885 79 DVFGEFAEYVTKLFGYD---------KVLPMNTGAEAVETAIKLARKWGYKVKGIPE-NQAIIVSAKGNFHGRTLGAISM 148 (401)
T ss_pred HHHHHHHHHHHhhcCCC---------EEEEeCccHHHHHHHHHHHHHHhhhhcCCCC-CCCEEEEECCCcCcccHHHHhC
Confidence 34445556677777753 4688999999999999999886432211110 24455555555 5565555554
Q ss_pred hCC-------C--CCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC----hhHHHHHHHH
Q 048643 211 VGI-------D--LKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP----LKPLCDVAKQ 277 (506)
Q Consensus 211 ~G~-------g--~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp----l~~I~~ia~~ 277 (506)
.|- + ...+..+|. .|+++|++++++. +....+|++....+++|.+-| +++|.++|++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~-------~d~~~le~~l~~~---~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~ 218 (401)
T TIGR01885 149 STDPDSRTNFGPYVPGFKKIPY-------NNLEALEEALEDH---GPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTK 218 (401)
T ss_pred cCCcccccccCCCCCCceEeCC-------CCHHHHHHHHHhc---CCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHH
Confidence 431 1 012333432 2789999988642 223445666666677898876 9999999999
Q ss_pred hCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCC-CcceEEEEeCchhHHhhhcCCccccCCccccCCC
Q 048643 278 FGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQ 356 (506)
Q Consensus 278 ~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~ 356 (506)
||+++++|++|.|.......+.....++ ..|.++++ |.++.. +..|+++.+ ++. .+.+... +..
T Consensus 219 ~~~lli~DEv~~g~g~~G~~~~~~~~~~-~~di~~~g--K~l~~g~~~ig~v~~~-~~i-~~~~~~~--~~~-------- 283 (401)
T TIGR01885 219 HNVLLIADEIQTGLGRTGKLLCVDHENV-KPDIVLLG--KALSGGVYPVSAVLAD-DDV-MLTIKPG--EHG-------- 283 (401)
T ss_pred cCCEEEEechhhCCCccchhhHHhhcCC-CCCEEEee--ccccCCCCCcEEEEEc-HHH-HhhccCC--CCC--------
Confidence 9999999999865322111111111233 46877765 988765 457777664 332 2333210 000
Q ss_pred ccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCC-CC-c---c--ceEEEeecCCCcccc
Q 048643 357 VVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDK-RV-S---P--SAVMDKLKPKYENCH 429 (506)
Q Consensus 357 ~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~-~~-~---p--~~v~f~~~~~~~~~~ 429 (506)
.+. ++.+.....+..+|+.+..+. +.++..+++++|.+.|++++ .+ . + .++.+.+....
T Consensus 284 ------~t~-~~~p~~~~aa~a~L~~i~~~~---l~~~~~~~~~~~~~~L~~l~~~~~~~~~g~g~~~~i~~~~~~---- 349 (401)
T TIGR01885 284 ------STY-GGNPLACAVAVAALEVLEEEK---LAENAEKLGEIFRDQLKKLPKPIITEVRGRGLLNAIVIDESK---- 349 (401)
T ss_pred ------CCC-CCCHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHhccCCceeEEeecCeeEEEEeccCc----
Confidence 011 111223334455566554433 34567778999999998873 22 1 1 33333332210
Q ss_pred cccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 048643 430 SQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQL 495 (506)
Q Consensus 430 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~ 495 (506)
. .....++.+.|.++|+. +.+. +...+|++.. ...++++|+++++.|++..
T Consensus 350 ------~----~~~~~~l~~~l~~~Gv~-v~~~---~~~~lRi~p~-l~~t~~~i~~~l~~l~~~l 400 (401)
T TIGR01885 350 ------T----GRTAWDLCLKLKEKGLL-AKPT---HGNIIRLAPP-LVITEEQLDEGLEIIKKVI 400 (401)
T ss_pred ------c----hhHHHHHHHHHHhCCEE-EEec---CCCEEEEeCC-ccCCHHHHHHHHHHHHHHh
Confidence 0 01246778888888864 4432 3468999984 6778889999999998763
No 272
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.59 E-value=1.3e-12 Score=136.82 Aligned_cols=329 Identities=14% Similarity=0.080 Sum_probs=210.7
Q ss_pred HHHHHHHHHHhhcC---CC-CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHH
Q 048643 105 IAGFLGEMLSSGFN---VV-GFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRV 180 (506)
Q Consensus 105 ~~~~~~~~l~~~~n---~~-~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~ 180 (506)
+...+.+.+...+. .. ...|....+...+.+.+.+++....|...+. ...++|+|+.+|+...+.+..+
T Consensus 105 p~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~-----~~IiiT~G~q~al~l~~~~l~~-- 177 (459)
T COG1167 105 PLEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEP-----EQIVITSGAQQALDLLLRLLLD-- 177 (459)
T ss_pred CHHHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCc-----CeEEEeCCHHHHHHHHHHHhCC--
Confidence 33444555544442 22 3456666788999999999999888887653 3689999887777644433322
Q ss_pred HHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCC
Q 048643 181 LNKIGRENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTT 260 (506)
Q Consensus 181 ~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt 260 (506)
+++.|.+.+.+|+....+++.+|+ +++.||+|++ .||+++|++.++... .-++.+.....|
T Consensus 178 ---------pGd~v~vE~PtY~~~~~~~~~~g~---~~~~vp~d~~---G~~~e~le~~~~~~~----~k~~y~~P~~qN 238 (459)
T COG1167 178 ---------PGDTVLVEDPTYPGALQALEALGA---RVIPVPVDED---GIDPEALEEALAQWK----PKAVYVTPTFQN 238 (459)
T ss_pred ---------CCCEEEEcCCCcHHHHHHHHHcCC---cEEecCCCCC---CCCHHHHHHHHhhcC----CcEEEECCCCCC
Confidence 788999999999999999999999 9999999853 799999999998751 123444455789
Q ss_pred CCCcccCh---hHHHHHHHHhCCEEEeecccccccccCccchhhhcCCC--CCCeeEEcCccccCCCCcceEEEEeCchh
Q 048643 261 AITAVDPL---KPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVE--GADSFSLNAHKWFFTTLDCCCLWVKDPSA 335 (506)
Q Consensus 261 ~tG~idpl---~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~--~aDsi~~~~hK~l~~p~~~g~~~~r~~~~ 335 (506)
+||.+-++ ++|.++|++|++|++-|..|+-...-.+.... +.++. +=-....++.|.+.....+|++..... .
T Consensus 239 PtG~tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~-l~~ld~~~rViy~gSFSK~l~PglRlG~vv~p~~-~ 316 (459)
T COG1167 239 PTGVTMSLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPP-LKALDAPGRVIYLGSFSKTLAPGLRLGYVVAPPE-L 316 (459)
T ss_pred CCCCccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCC-hHhhCCCCCEEEEeeehhhcccccceeeeeCCHH-H
Confidence 99999665 68999999999999999999765443221111 11111 122345668899999999999887643 1
Q ss_pred HHhhhcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhc--hhHHHHHHHHHHHHHHHHHHHHHcCCC--
Q 048643 336 LVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYG--VANLRHFLRSHVNMAKLFERLVASDKR-- 411 (506)
Q Consensus 336 l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G--~~g~~~~i~~~~~~a~~l~~~l~~~~~-- 411 (506)
. +.+......... .+..+....+...+. .| .+.++++.....+..+.+.+.|.+...
T Consensus 317 ~-~~~~~~k~~~~~-----------------~~s~~~Q~~la~~l~-~G~~~~hl~~lR~~y~~rr~~l~~~L~~~~~~~ 377 (459)
T COG1167 317 I-EKLLRLKQAADL-----------------GPSSLSQAALAAFLL-SGHYDRHLRRLRREYARRRDALLEALAEYLPEL 377 (459)
T ss_pred H-HHHHHHHHHhcC-----------------CCChHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 1 122111001100 010111112222233 33 344566666677778888888887632
Q ss_pred Cc---c--ce-EEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeee-EC----CEEEEEEEecCCCCC
Q 048643 412 VS---P--SA-VMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAV-CG----GIYAMRFAVGATLTE 480 (506)
Q Consensus 412 ~~---p--~~-v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-~~----g~~~lR~~~~~~~tt 480 (506)
++ | ++ ++.++.+. -...++.++..++|+.+..... +. ...++|+++++ .+
T Consensus 378 ~~~~~p~gG~flwl~l~~~-----------------~~~~~l~~~a~~~gv~i~~~g~~f~~~~~~~~~~Rl~~s~--~~ 438 (459)
T COG1167 378 ATWTRPEGGLFLWLELPEG-----------------IDARELLAAALEKGVVVTPLGSAFSADGDPRNGLRLSFSS--PS 438 (459)
T ss_pred eeeecCCceEEEEEEcCCC-----------------CCHHHHHHHHHHCCCEEEcCCccccCCCCCCCeEEEEcCC--CC
Confidence 22 5 33 33344332 1135677777777876544232 21 24589999965 45
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 048643 481 ERHVMVAWTMVQEQLEAFL 499 (506)
Q Consensus 481 ~edi~~li~~l~~~~~~l~ 499 (506)
+++|++.+..|.++.++..
T Consensus 439 ~e~i~~gi~~l~~~~~~~~ 457 (459)
T COG1167 439 EEEIEEGIKRLAALLREAA 457 (459)
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 7799999998888877654
No 273
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.59 E-value=2.5e-12 Score=132.10 Aligned_cols=296 Identities=14% Similarity=0.051 Sum_probs=164.8
Q ss_pred HHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHh
Q 048643 132 ELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIV 211 (506)
Q Consensus 132 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~ 211 (506)
....++.+++++++|.+ ..+++.||++|+..++.+++....+. +. .++.+++.+...|.+...+....
T Consensus 69 ~~~~~l~~~la~~~g~~---------~~~~~~sg~~a~~~a~~~~~~~~~~~-~~--~~~~vi~~~~~yh~~~~~~~~~~ 136 (379)
T TIGR00707 69 EPQEELAEKLVEHSGAD---------RVFFCNSGAEANEAALKLARKYTGDK-GK--EKKKIIAFENSFHGRTMGALSAT 136 (379)
T ss_pred HHHHHHHHHHHhhCCCC---------EEEEeCCcHHHHHHHHHHHHHHhhcc-CC--CCCeEEEECCCcCCccHHHHHhc
Confidence 34555667788888865 46889999999999998876432100 00 01334444444454433333222
Q ss_pred CCCCCCeEEEecCCCCCc--ccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc----cChhHHHHHHHHhCCEEEee
Q 048643 212 GIDLKNFRAIKTTKSSSY--GLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV----DPLKPLCDVAKQFGIWVHVD 285 (506)
Q Consensus 212 G~g~~~v~~v~~~~~~~~--~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i----dpl~~I~~ia~~~g~~lhVD 285 (506)
+.........+...+-.. ..|+++|++.+.+. +.+|+++...+++|.+ +++++|.++|++||+++++|
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~------~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~D 210 (379)
T TIGR00707 137 GQPKYQKGFEPLVPGFSYAPYNDIESLKKAIDDE------TAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFD 210 (379)
T ss_pred CChhhhccCCCCCCCceeeCCCCHHHHHHHhhhC------eeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEe
Confidence 210000011222211111 11899999988653 3366666666666654 34899999999999999999
Q ss_pred cccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCccc
Q 048643 286 AAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQI 365 (506)
Q Consensus 286 aA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~ 365 (506)
++|.++............++ ..|.++ +.|.++.++..|+++.+. +. .+.+.... .. ..+
T Consensus 211 e~~~~~~~~g~~~~~~~~~~-~~d~~t--~sK~~~~G~riG~~~~~~-~~-~~~~~~~~--~~------------~~~-- 269 (379)
T TIGR00707 211 EVQTGIGRTGKFFAYEHYGI-EPDIIT--LAKGLGGGVPIGATLAKE-EV-AEAFTPGD--HG------------STF-- 269 (379)
T ss_pred ccccCCCccchhhhHHhcCC-CCCEEE--EcccccCCcccEEEEEcH-HH-HhhhcCCC--CC------------CCC--
Confidence 99975422111010001122 345554 579999767889887753 22 23332100 00 001
Q ss_pred cCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCC---CCc---c--ceEEEeecCCCcccccccccchH
Q 048643 366 TLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDK---RVS---P--SAVMDKLKPKYENCHSQQLVTEE 437 (506)
Q Consensus 366 ~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~---~~~---p--~~v~f~~~~~~~~~~~~~~~~~~ 437 (506)
+...+....++.+|+.+.. .++.++..+++++++++|++.. ++. + +++.+++.+.
T Consensus 270 -~~~~~~~~aa~aaL~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~~~~~~~~------------- 332 (379)
T TIGR00707 270 -GGNPLACAAALAVLEVIEK---ERLLENVKEKGDYFKERLEELGKNYPNKEVRGKGLMLGIELEAP------------- 332 (379)
T ss_pred -CCCHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHHHHHHhhCCCCccccCceEEEEEecCc-------------
Confidence 1111223344555555432 2355666677777777776531 111 1 4455554321
Q ss_pred HHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHH
Q 048643 438 EAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQ 494 (506)
Q Consensus 438 ~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~ 494 (506)
..++.+.|.+.|+. +.+. +..++|+++. ...++++|+++++.|+++
T Consensus 333 ------~~~~~~~l~~~Gv~-v~~~---~~~~lRi~~~-~~~t~~~i~~~~~~l~~~ 378 (379)
T TIGR00707 333 ------CKDIVKKALEKGLL-VNCA---GPKVLRFLPP-LIITKEEIDEAVSALEEA 378 (379)
T ss_pred ------HHHHHHHHHHCCcE-EeeC---CCCEEEEECC-CcCCHHHHHHHHHHHHHh
Confidence 25677777788875 4432 3468999973 445777999999999864
No 274
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.58 E-value=2e-12 Score=131.74 Aligned_cols=286 Identities=13% Similarity=0.057 Sum_probs=173.2
Q ss_pred ccccChhhHHHHHHHHHHHHHHcCCC-CccccCCCCcEEEcCCchHHHHHHHHHH-HHHHHHhhcccCCCCeEEEeCCCC
Q 048643 123 NWISSPAATELENIVMDWLGQMLKLP-KSFLFSGNGGGVIQGTTCEAILCTLTAA-RDRVLNKIGRENISKLVVYGSDQT 200 (506)
Q Consensus 123 ~~~~~p~~~~lE~~~~~~la~l~g~~-~~~~~~~~~~g~~t~ggt~a~l~al~~a-r~~~~~~~~~~~~~~~~v~~s~~~ 200 (506)
.|....+..++.+++.+|+.+.+|.+ .+. ...++|+|+++++..++.+. .. ++..|+++..+
T Consensus 51 ~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~-----~~I~it~G~~~~i~~~~~~l~~~-----------~gd~Vl~~~p~ 114 (357)
T TIGR03539 51 GYPQTWGTPELREAIVDWLERRRGVPGLDP-----TAVLPVIGTKELVAWLPTLLGLG-----------PGDTVVIPELA 114 (357)
T ss_pred CCCcccCCHHHHHHHHHHHHHhcCCCCCCc-----CeEEEccChHHHHHHHHHHHcCC-----------CCCEEEECCCC
Confidence 45545567889999999999988765 321 37888999888876544432 12 56778889999
Q ss_pred chHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC---hhHHHHHHHH
Q 048643 201 HCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP---LKPLCDVAKQ 277 (506)
Q Consensus 201 H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp---l~~I~~ia~~ 277 (506)
|..+...++.+|. +++.++ |++.++. + .+.+|+++.++|+||.+-+ +++|+++|++
T Consensus 115 y~~~~~~~~~~g~---~~~~v~---------~~~~l~~---~------~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~ 173 (357)
T TIGR03539 115 YPTYEVGALLAGA---TPVAAD---------DPTELDP---V------GPDLIWLNSPGNPTGRVLSVDELRAIVAWARE 173 (357)
T ss_pred cHHHHHHHHhcCC---EEeccC---------ChhhcCc---c------CccEEEEeCCCCCcCccCCHHHHHHHHHHHHH
Confidence 9999998898888 776663 1222221 1 2447778889999998854 7789999999
Q ss_pred hCCEEEeecccccccccCccchhhhc-----CCCCCCeeEEcCccccCCC-CcceEEEEeCchhHHhhhcCCccccCCcc
Q 048643 278 FGIWVHVDAAYAGSACICPEFQHFID-----GVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSALVSSLSTNPEYLKNKA 351 (506)
Q Consensus 278 ~g~~lhVDaA~gg~~~~~~~~~~~~~-----gi~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl~~~~ 351 (506)
||+|+++|.+|+.... .+.....+. +...-..+..++.|.++.| ..+|+++. ++... ..+.....+..
T Consensus 174 ~~~~ii~De~y~~~~~-~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~R~G~~i~-~~~~~-~~~~~~~~~~~--- 247 (357)
T TIGR03539 174 RGAVVASDECYLELGW-EGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLAGYRAGFVAG-DPALV-AELLTVRKHAG--- 247 (357)
T ss_pred cCeEEEEecchhhhcc-CCCCccceecccCCCccccEEEEeccccccCCCceeEEEEec-CHHHH-HHHHHHHhhcc---
Confidence 9999999999964322 111101111 0001124556789998544 44677764 33332 22211000000
Q ss_pred ccCCCccCCCCccccCCCCCCchHHHHHHHHhc-hhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c--ceEEEeecCCC
Q 048643 352 TESKQVVDYKDWQITLSRRFRSLKLWLVIRNYG-VANLRHFLRSHVNMAKLFERLVASDKRVS---P--SAVMDKLKPKY 425 (506)
Q Consensus 352 ~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G-~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p--~~v~f~~~~~~ 425 (506)
.....+...++...+- ...+++...+..+..+++.+.|.+. ++. | +++.+...+..
T Consensus 248 -----------------~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~-g~~~~~p~~~~~~~~~~~~~ 309 (357)
T TIGR03539 248 -----------------LMVPAPVQAAMVAALGDDGHVAEQKARYAARRAQLKPALEKA-GFRIDHSEAGLYLWATRGED 309 (357)
T ss_pred -----------------cCCCHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHc-CCCCcCCCccEEEEEECCCC
Confidence 0001122223333332 2345556666777888888888885 665 4 54444432220
Q ss_pred cccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeE---CCEEEEEEEecCCCCCHHHHHHHHHHH
Q 048643 426 ENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVC---GGIYAMRFAVGATLTEERHVMVAWTMV 491 (506)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~---~g~~~lR~~~~~~~tt~edi~~li~~l 491 (506)
...+.+.|.+.|+. +.+..+ .+..++|+++.+ ++++|++.++.|
T Consensus 310 ------------------~~~~~~~l~~~gV~-v~pg~~f~~~~~~~iRis~~~---~~~~i~~~~~~l 356 (357)
T TIGR03539 310 ------------------AWDTVDRLAELGIL-VAPGDFYGPAGSQHVRVALTA---TDERIAAAVARL 356 (357)
T ss_pred ------------------HHHHHHHHHhCCEE-ECCccccCCCCCCeEEEEecC---CHHHHHHHHHhh
Confidence 23466667777874 444332 235799999964 467888888765
No 275
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.58 E-value=2.7e-12 Score=131.00 Aligned_cols=284 Identities=14% Similarity=0.047 Sum_probs=170.4
Q ss_pred hHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHH
Q 048643 130 ATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQ 209 (506)
Q Consensus 130 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~ 209 (506)
..++.+.+ ++.++++.+ ..++|+|+++++...+.+. . ++..|++...++..+...++
T Consensus 59 ~~~Lr~ai----a~~~~v~~~-------~I~it~G~~~~i~~~~~~l-~-----------~g~~vlv~~P~y~~~~~~~~ 115 (360)
T PRK07392 59 YRELRLAL----AQHHQLPPE-------WILPGNGAAELLTWAGREL-A-----------QLRAVYLITPAFGDYRRALR 115 (360)
T ss_pred HHHHHHHH----HHHhCcChh-------hEEECCCHHHHHHHHHHHh-C-----------CCCeEEEECCCcHHHHHHHH
Confidence 34555554 444577654 7889998888776554432 1 23367778899999999999
Q ss_pred HhCCCCCCeEEEecCCCCCc---ccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeec
Q 048643 210 IVGIDLKNFRAIKTTKSSSY---GLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDA 286 (506)
Q Consensus 210 ~~G~g~~~v~~v~~~~~~~~---~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDa 286 (506)
.+|+ +++.+|.+.++.+ ..+++.+++... .+.+++.+.++|+||.+-+.++|.++|+++++ +++|.
T Consensus 116 ~~g~---~~~~v~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~l~nP~NPTG~~~~~~~l~~l~~~~~~-~IiDE 184 (360)
T PRK07392 116 AFGA---TVKELPLPLDQPSPGLTLRLQTLPPQLT-------PNDGLLLNNPHNPTGKLWSREAILPLLEQFAL-VVVDE 184 (360)
T ss_pred HcCC---eEEEEecccccCCcccccCHHHHHHhcc-------CCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCE-EEEEC
Confidence 9999 9999999754332 245555544321 24478888999999999999999999999984 67799
Q ss_pred ccccccccCccchhhhcCCCCC-C-eeEEcCccccC-CCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCc
Q 048643 287 AYAGSACICPEFQHFIDGVEGA-D-SFSLNAHKWFF-TTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDW 363 (506)
Q Consensus 287 A~gg~~~~~~~~~~~~~gi~~a-D-si~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~ 363 (506)
+|..+..-. .....+..+... . .+..++.|.++ ....+|+++... ..+ +.+...... +
T Consensus 185 ~y~~~~~~~-~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~~~-~~~-~~~~~~~~~----------------~ 245 (360)
T PRK07392 185 AFMDFLPPD-AEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIAHP-DRL-QRWQQWRDP----------------W 245 (360)
T ss_pred chhhhccCc-cccchHHHhhcCCCEEEEEechhhhcCCchheeeeeCCH-HHH-HHHHhhCCC----------------C
Confidence 997654211 111111111111 1 34457899998 557799887743 222 223211000 0
Q ss_pred cccCCCCCCchHHHHHHHHhchhH-HHHHHHHHHHHHHHHHHHHHcCCCCc--c---ceEEEeecCCCcccccccccchH
Q 048643 364 QITLSRRFRSLKLWLVIRNYGVAN-LRHFLRSHVNMAKLFERLVASDKRVS--P---SAVMDKLKPKYENCHSQQLVTEE 437 (506)
Q Consensus 364 ~~~~sr~~~al~~~~~l~~~G~~g-~~~~i~~~~~~a~~l~~~l~~~~~~~--p---~~v~f~~~~~~~~~~~~~~~~~~ 437 (506)
+ ...+..+++...+.... .+...+...+..+++.+.|++++++. | +.+.++....
T Consensus 246 ~------~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~fl~~~~~~~------------- 306 (360)
T PRK07392 246 P------VNGLAAAAAIAALADRDFQQQTWAWLPPAREALFQGLASLPGLTPLPSAANFLLVQSQGS------------- 306 (360)
T ss_pred C------CCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhCCCcEECCCCCCEEEEEcCCC-------------
Confidence 0 12233344444443222 33344556667888889998887876 4 3333333211
Q ss_pred HHHHHHHHHHHHHHH-hcCcEEEeeeeEC--CEEEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 048643 438 EAINEFNRELLESIN-ASGKAYMTHAVCG--GIYAMRFAVGATLTEERHVMVAWTMVQEQL 495 (506)
Q Consensus 438 ~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lR~~~~~~~tt~edi~~li~~l~~~~ 495 (506)
..++.+++. +.|+....+..+. +..++|++++. .++.+++.++|+++.
T Consensus 307 ------~~~l~~~ll~~~gv~v~pg~~f~~~~~~~iRi~~~~----~~~~~~l~~al~~~~ 357 (360)
T PRK07392 307 ------ALQLQEKLLQQHRILIRDCLSFPELGDRYFRVAVRT----EAENQRLLEALAAIL 357 (360)
T ss_pred ------HHHHHHHHHhhCCEEEEeCCCCCCCCCCEEEEEeCC----HHHHHHHHHHHHHHh
Confidence 244555543 4576544333332 34799999963 335567777776653
No 276
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.58 E-value=4.9e-12 Score=132.82 Aligned_cols=282 Identities=12% Similarity=0.105 Sum_probs=165.6
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH---hcCCCCCCCCCChhHHhhhCCCCCCC-CCCCHHHHHHHHHHHhcCC
Q 048643 11 GNSGLVINPLDPEEFRRQAHMVIDFIADYYK---NVDKYPVRSQVEPGYLRKRLPECAPY-NPESMETILQDVQEHIVPG 86 (506)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~p~~~~~~p~~l~~~~~~~~p~-~~~~~~~il~~~~~~~~~~ 86 (506)
|||+= +.+.-++.|-.+++-.++....-+. .+...|- .+-+..++..-+-+ ...+--+.|+.+.+...
T Consensus 30 gnpn~-~~~~~r~af~~~~~f~~~e~~~~~~~~~~~~g~~~-----~~g~~~r~~~~~~~~~~~~g~~~l~~~i~l~~-- 101 (521)
T TIGR03801 30 GNPNW-TATTPREAFFLLGQFAVEETRRSWSYPGGLGGMPQ-----KEGIEERFETFLAENKSQPGAEFLRDIISYVI-- 101 (521)
T ss_pred CCccc-ccCcHHHHHHHHHHHHHHHHHHhhccccCcCCCcC-----cchHHHHHHHHHHhCCCCchHHHHHHHHhhcC--
Confidence 45543 3667788888888887776654332 2222221 22223332221111 12233455555544211
Q ss_pred CCCCCCCCccccCCCCCCHHHHHHHHHHhhcCCCCcccc-cChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCc
Q 048643 87 VTHWQSPNYFAYFPSSGSIAGFLGEMLSSGFNVVGFNWI-SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTT 165 (506)
Q Consensus 87 ~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~-~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~gg 165 (506)
..|. + + ++..+-++.....+. .|. ........|+.+.+|+.+.++..... ......++|+|+
T Consensus 102 ----g~p~---~-~----~~~~~~~~~~~~~~~---~Y~~p~g~~~~~e~iv~~y~~~~~~~~~~~--~~~~~V~it~Ga 164 (521)
T TIGR03801 102 ----DQLG---F-D----PDAFLYEMCDGIIGD---NYPVPDRMLPHSEKIVHQYLIQEMCGNKPP--PGEFDLFAVEGG 164 (521)
T ss_pred ----CCCC---C-C----CCHHHHHHHHHhhcC---CCCCCCCCHHHHHHHHHHHHHhhccCCCCC--CCcCeEEEeCCH
Confidence 1222 1 1 234445555544433 343 23344556666667877765532111 000168899999
Q ss_pred hHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCC-----cccCHHHHHHHH
Q 048643 166 CEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSS-----YGLSPDSLLTQI 240 (506)
Q Consensus 166 t~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~-----~~~d~~~L~~~i 240 (506)
++|+..++.+.....+- .++..|++...++..+...+++.|.|. +++.|++++.++ |.+|++.|++++
T Consensus 165 t~al~~~~~~l~~~~ll------~pGD~Vlv~~P~y~~y~~~~~l~~~g~-~vv~i~~~~~~~~g~~~~~~d~~~l~~~~ 237 (521)
T TIGR03801 165 TAAMCYIFDSLKANELL------KKGDKIALMTPIFTPYLEIPELPRYDF-EVVRIKADEMTEDGTHTWQYPDKELEKLR 237 (521)
T ss_pred HHHHHHHHHHHhHhhcC------CCCCEEEEeCCCcHHHHHHHHHhcCCc-EEEEeecccccccccccCCCCHHHHHHhc
Confidence 99988777653221111 166778888899999998888875421 677777754322 889999999876
Q ss_pred HHHHhcCCccEEEEEeccCCCCCcccC---hhHHHHHHHHh--CCEEEeecccccccccCccchhhhcCCCCCCeeEEcC
Q 048643 241 NLDVEAGLVPLFLCATIGTTAITAVDP---LKPLCDVAKQF--GIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNA 315 (506)
Q Consensus 241 ~~~~~~g~~p~~Vv~t~gtt~tG~idp---l~~I~~ia~~~--g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~ 315 (506)
++.++ +|+++.++|+||.+-+ +++|+++|++| ++|+++|.+|+.+.. .+.........--.+..++
T Consensus 238 ~~~~k------ai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~---~~~sl~~~~~~~vI~v~Sf 308 (521)
T TIGR03801 238 DPSIK------ALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVD---DFRSLFAELPYNTIGVYSF 308 (521)
T ss_pred CCCCc------EEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhcc---cccchhhhCCCCEEEEEcc
Confidence 54433 6777899999999955 78888999987 899999999975432 2222211111112345568
Q ss_pred ccccC-CCCcceEEEEeCc
Q 048643 316 HKWFF-TTLDCCCLWVKDP 333 (506)
Q Consensus 316 hK~l~-~p~~~g~~~~r~~ 333 (506)
.|.++ ..+-.|+++..+.
T Consensus 309 SK~fg~~G~RlG~i~~~~~ 327 (521)
T TIGR03801 309 SKYFGATGWRLGTIALHKD 327 (521)
T ss_pred hhhccCchhhhhhhhcCch
Confidence 89986 4477888877654
No 277
>PRK08637 hypothetical protein; Provisional
Probab=99.58 E-value=2.5e-12 Score=132.52 Aligned_cols=330 Identities=12% Similarity=0.048 Sum_probs=184.0
Q ss_pred HHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcC-CCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhc
Q 048643 107 GFLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLK-LPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIG 185 (506)
Q Consensus 107 ~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g-~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~ 185 (506)
..+.+.+..........|....+...+.+.+.+++.+..+ ..... ....++|+|+++++...+.+..+
T Consensus 23 ~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~----~~~I~it~G~~~al~~~~~~l~~------- 91 (388)
T PRK08637 23 SSLQDLLNDLTPDEIFPYAPPQGIPELRDLWQEKMLRENPSLSGKK----MSLPIVTNALTHGLSLVADLFVD------- 91 (388)
T ss_pred HHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHHhccCccccccc----cceeeEccchHHHHHHHHHHhcC-------
Confidence 3334444432222334455445566677777777665432 21110 02568899988887666554433
Q ss_pred ccCCCCeEEEeCCCCchHHHHHH-HHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCc
Q 048643 186 RENISKLVVYGSDQTHCALQKAA-QIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITA 264 (506)
Q Consensus 186 ~~~~~~~~v~~s~~~H~s~~ka~-~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~ 264 (506)
++..|++...++..+...+ ...|. +++.+|++.+ ++.+|+++|+++++.... ....+++.+.++|+||.
T Consensus 92 ----~gd~Vlv~~P~y~~~~~~~~~~~g~---~vv~v~~~~~-~~~~d~~~l~~~~~~~~~--~~~~~~~~~~P~NPTG~ 161 (388)
T PRK08637 92 ----QGDTVLLPDHNWGNYKLTFNTRRGA---EIVTYPIFDE-DGGFDTDALKEALQAAYN--KGKVIVILNFPNNPTGY 161 (388)
T ss_pred ----CCCEEEEcCCCCccHHHHHHHhcCC---EEEEecccCC-CCcCCHHHHHHHHHhhcc--CCCEEEEEeCCCCCCCC
Confidence 5667888989998888875 46798 9999998422 347899999998872211 12345777779999998
Q ss_pred c---cChhHHHHHHHH-----hCCEEEeecccccccccCccchh---hhcCC-CCCCeeEE-cCccccC-CCCcceEEEE
Q 048643 265 V---DPLKPLCDVAKQ-----FGIWVHVDAAYAGSACICPEFQH---FIDGV-EGADSFSL-NAHKWFF-TTLDCCCLWV 330 (506)
Q Consensus 265 i---dpl~~I~~ia~~-----~g~~lhVDaA~gg~~~~~~~~~~---~~~gi-~~aDsi~~-~~hK~l~-~p~~~g~~~~ 330 (506)
+ +.+++|+++|++ |++|+++|.+|.....-...... .+.+. ++.-.+.+ ++.|.++ ...-+|++++
T Consensus 162 ~~s~~~~~~l~~~~~~~~~~~~~~~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~~~~ 241 (388)
T PRK08637 162 TPTEKEATAIVEAIKELADAGTKVVAVVDDAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVGFITF 241 (388)
T ss_pred CCCHHHHHHHHHHHHHHHhcCCcEEEEecccchhcccCCccchhhHHHhhcccccceEEEeccccccCCCcccceEEEEE
Confidence 8 447778887775 89999999999765432111111 11111 12222332 7788655 5577999887
Q ss_pred eC----chhHHhhhcCCc-cccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHH----HHHHHHHHHH
Q 048643 331 KD----PSALVSSLSTNP-EYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHF----LRSHVNMAKL 401 (506)
Q Consensus 331 r~----~~~l~~~~~~~~-~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~----i~~~~~~a~~ 401 (506)
.. ...+.+.+.... .+.... ..+ ...+...++...+....+.+. .....+..+.
T Consensus 242 ~~~~~~~~~l~~~~~~~~~~~~~~~--------------~~~---~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~ 304 (388)
T PRK08637 242 GTKAGSSQTVKEALEKKVKGLIRSN--------------ISN---GPHPSQSAVLRALNSPEFDKEKQEKFQILKERYEK 304 (388)
T ss_pred ccccCCcHHHHHHHHHHHHHHhhcc--------------cCC---CCcHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 53 222222221100 000000 000 112222333333333233332 3334444555
Q ss_pred HHHHHHcC---CCCc---c--ceEEE-eecCCCcccccccccchHHHHHHHHHHHHHHHH-hcCcEEEeeeeECCEEEEE
Q 048643 402 FERLVASD---KRVS---P--SAVMD-KLKPKYENCHSQQLVTEEEAINEFNRELLESIN-ASGKAYMTHAVCGGIYAMR 471 (506)
Q Consensus 402 l~~~l~~~---~~~~---p--~~v~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~g~~~lR 471 (506)
+.+.|++. +++. | +.+.+ ++. . ....++.+.+. +.|+.... .+..++|
T Consensus 305 ~~~~l~~~~~~~~~~~~~~~~g~~~~~~l~-~-----------------~~~~~l~~~l~~~~gv~~~~----~~~~~iR 362 (388)
T PRK08637 305 TKEVLYDGKYDDAWQAYPFNSGYFMCLKLK-G-----------------VDAEELRVHLLEKYGIGTIA----LNETDLR 362 (388)
T ss_pred HHHHHHhhCCCCCcccccccceEEEEecCC-h-----------------HHHHHHHHHHhhhcceEEEe----ccCCceE
Confidence 66666554 2454 3 33222 332 1 11356667765 45664332 2456899
Q ss_pred EEecCCCCCHHHHHHHHHHHHHHHHHH
Q 048643 472 FAVGATLTEERHVMVAWTMVQEQLEAF 498 (506)
Q Consensus 472 ~~~~~~~tt~edi~~li~~l~~~~~~l 498 (506)
++++. .++++++..++.|.++.+.+
T Consensus 363 i~~~~--~~~~~i~~~~~~l~~~~~~~ 387 (388)
T PRK08637 363 IAFSC--VEEEDIPELFDSIYKAIKDL 387 (388)
T ss_pred EEeec--CCHHHHHHHHHHHHHHHHhc
Confidence 99964 46779999999888877643
No 278
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.57 E-value=3.6e-12 Score=130.83 Aligned_cols=286 Identities=13% Similarity=0.071 Sum_probs=166.6
Q ss_pred hHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHH
Q 048643 130 ATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQ 209 (506)
Q Consensus 130 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~ 209 (506)
..+++.++.+++++..+.+ ..+++++|++||..|+..+|... + ++.+|......|-+..-+..
T Consensus 69 ~~~~~~~la~~l~~~~~~~---------~~~~~~sG~~a~~~A~~~a~~~~-------g-~~~vi~~~~~~Hg~~~~~~~ 131 (377)
T PRK02936 69 TNSLQEEVASLLAENSAGD---------LVFFCNSGAEANEAALKLARKHT-------G-KSKIVTFEQSFHGRTFGTMS 131 (377)
T ss_pred CCHHHHHHHHHHHhcCCCC---------EEEEeCCcHHHHHHHHHHHHHhc-------C-CCeEEEECCCcCCCcHHhhh
Confidence 3567788888888876542 56899999999999999887531 0 23455566667766655555
Q ss_pred HhCCCC---------CCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCccc----ChhHHHHHHH
Q 048643 210 IVGIDL---------KNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVD----PLKPLCDVAK 276 (506)
Q Consensus 210 ~~G~g~---------~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~id----pl~~I~~ia~ 276 (506)
..|... ..+..+|. -|+++|++.+.+. +.+|++....+..|.+. .+++|.++|+
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~~~~~------~~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~ 198 (377)
T PRK02936 132 ATGQEKIKEGFGPLLPGFTHVPF-------NDIKALKEVMNEE------VAAVMLEVVQGEGGVIPADPAFLQEVQTLCK 198 (377)
T ss_pred ccCCccccccCCCCCCCceEeCC-------CCHHHHHHhccCC------eEEEEEecccCCCCCccCCHHHHHHHHHHHH
Confidence 443211 01222221 2788999888643 33666666666666653 3999999999
Q ss_pred HhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCC
Q 048643 277 QFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQ 356 (506)
Q Consensus 277 ~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~ 356 (506)
+||+++++|.+|.++......+.....++ ..|.++ ..|.++..+..|+++.+. . +...+... ..
T Consensus 199 ~~~~~lI~DEv~~g~g~~g~~~~~~~~~~-~~di~t--~sK~l~~G~~ig~v~~~~-~-~~~~~~~~---~~-------- 262 (377)
T PRK02936 199 KFGALLIIDEVQTGIGRTGTLFAYEQFGL-DPDIVT--VAKGLGNGIPVGAMIGKK-E-LGTAFGPG---SH-------- 262 (377)
T ss_pred HcCCEEEEeccccCCCcCchhhHHHhhCC-CCcEEE--EcccccCCCccEEEEEcH-H-HHhhccCC---CC--------
Confidence 99999999999976422111111001122 346554 579998656688776653 2 23333210 00
Q ss_pred ccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHc----CCCCc---c--ceEEEeecCCCcc
Q 048643 357 VVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVAS----DKRVS---P--SAVMDKLKPKYEN 427 (506)
Q Consensus 357 ~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~----~~~~~---p--~~v~f~~~~~~~~ 427 (506)
..+. ++.+.....+-.+|+.+. ..+++++..++.+++++.|++ .+.+. + .++.+.+.+.
T Consensus 263 -----~~t~-~~~~~~~aaa~a~l~~~~---~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~--- 330 (377)
T PRK02936 263 -----GSTF-GGNPLAMAAAKEVLQVIK---QPSFLEEVQEKGEYFLQKLQEELEHLECVKNIRGKGLMIGIECTEE--- 330 (377)
T ss_pred -----CCCC-CCCHHHHHHHHHHHHHHH---hccHHHHHHHHHHHHHHHHHHHHhhCCcEEeEeecceEEEEEecch---
Confidence 0011 111112222333333331 123455666677777777665 33222 2 3344443211
Q ss_pred cccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHH
Q 048643 428 CHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQ 494 (506)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~ 494 (506)
..++.+.+.++|++... .+..++|+++ +...++++|+++++.|+++
T Consensus 331 ----------------~~~~~~~l~~~gv~v~~----~g~~~lRi~p-~~~~~~~~i~~~i~~l~~~ 376 (377)
T PRK02936 331 ----------------VAPVIEQLREEGLLVLS----AGPNVIRLLP-PLVVTKEELDQAVYLLKKV 376 (377)
T ss_pred ----------------HHHHHHHHHHCCeEEec----CCCCEEEEEC-CcccCHHHHHHHHHHHHHh
Confidence 35567777788875432 2446899997 3456788999999999764
No 279
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.56 E-value=3.9e-13 Score=131.16 Aligned_cols=239 Identities=12% Similarity=0.092 Sum_probs=166.5
Q ss_pred cccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEe---CCCC
Q 048643 124 WISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYG---SDQT 200 (506)
Q Consensus 124 ~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~---s~~~ 200 (506)
|....-..++|..+++...+|||.+.. -+=.-+||.||+.++.+..+ |+..|+. +.-.
T Consensus 64 YgGce~VD~vE~laierak~LFga~~a--------nVQPhSGs~AN~av~~All~-----------pGDtimgm~l~~GG 124 (413)
T COG0112 64 YGGCEYVDEVEELAIERAKKLFGAEYA--------NVQPHSGSQANQAVYLALLQ-----------PGDTIMGLDLSHGG 124 (413)
T ss_pred cCCCeeHHHHHHHHHHHHHHHhCCCcc--------ccCCCCchHHHHHHHHHHcC-----------CCCeEecccCCCCC
Confidence 556667889999999999999999753 23445789999988777655 5555553 3335
Q ss_pred chHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCC
Q 048643 201 HCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGI 280 (506)
Q Consensus 201 H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~ 280 (506)
|-+.-.-....|.- -+++..++|.+ ++.+|.|.+++.+.+.+ |.+|++ |.+.+-..-|++++.+||++.|+
T Consensus 125 HltHg~~v~~sG~~-~~~v~Y~vd~e-t~~IDyD~~~k~a~e~k-----PK~ii~--G~SaY~r~id~~~~reIad~VGA 195 (413)
T COG0112 125 HLTHGSPVNFSGKL-FNVVSYGVDPE-TGLIDYDEVEKLAKEVK-----PKLIIA--GGSAYSRPIDFKRFREIADEVGA 195 (413)
T ss_pred cccCCCCCCcccee-EEeEecccccc-cCccCHHHHHHHHHHhC-----CCEEEE--CccccccccCHHHHHHHHHHhCc
Confidence 55544333333331 26677777753 58999999999998863 656554 45566677899999999999999
Q ss_pred EEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCC
Q 048643 281 WVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDY 360 (506)
Q Consensus 281 ~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~ 360 (506)
+|.+|.||-.++.....+..- ++.||.+|.+.||+|..|.| |++++++.+.. ..+... ++.
T Consensus 196 ~L~~DmAHiaGLVA~G~~p~P---~~~AdvVTtTTHKTlrGPrG-G~Il~~~eel~-kkin~a---VFP----------- 256 (413)
T COG0112 196 YLMVDMAHVAGLIAGGVHPNP---LPHADVVTTTTHKTLRGPRG-GIILTNDEELA-KKINSA---VFP----------- 256 (413)
T ss_pred eEEehHHHHHHHHhcccCCCC---CCccceEeCCcccCCCCCCc-eEEEeccHHHH-HHhhhh---cCC-----------
Confidence 999999996665544333332 44899999999999999974 77777764432 233211 110
Q ss_pred CCccccCCCCCC-chHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc
Q 048643 361 KDWQITLSRRFR-SLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS 413 (506)
Q Consensus 361 ~~~~~~~sr~~~-al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~ 413 (506)
+++++-... ..+...+++..-..+|++..++..++|+.|++.|.+. ||.
T Consensus 257 ---g~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~-G~~ 306 (413)
T COG0112 257 ---GLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKER-GFK 306 (413)
T ss_pred ---ccCCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHc-CCe
Confidence 112222111 2334456666667889999999999999999999986 777
No 280
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.56 E-value=9.6e-12 Score=128.82 Aligned_cols=294 Identities=13% Similarity=0.068 Sum_probs=168.4
Q ss_pred HHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhC--
Q 048643 135 NIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVG-- 212 (506)
Q Consensus 135 ~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G-- 212 (506)
.++.+.|+++.+.+ ..+++++|++||..|+..+|.....+.+ ..++.+|.+....|-+..-+..+.|
T Consensus 85 ~~l~~~l~~~~~~~---------~~~~~~sGseA~e~a~klar~~~~~~~~--~~~~~ii~~~~~~HG~~~~~~~~~~~~ 153 (403)
T PRK05093 85 LRLAKKLIDATFAE---------RVFFANSGAEANEAAFKLARRYACDRHG--PEKTEIIAFHNSFHGRTLFTVSVGGQP 153 (403)
T ss_pred HHHHHHHHhhCCCC---------EEEEeCchHHHHHHHHHHHHHHHhhcCC--CCCCeEEEEcCCcCCchhhhHhhcCCh
Confidence 34556677766542 4688999999999999999876432111 1144566777778876654444322
Q ss_pred -----CC--CCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCC-cccC----hhHHHHHHHHhCC
Q 048643 213 -----ID--LKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAIT-AVDP----LKPLCDVAKQFGI 280 (506)
Q Consensus 213 -----~g--~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG-~idp----l~~I~~ia~~~g~ 280 (506)
++ ..+++.+|. -|++.|++.+.+. +.+|++. +.+++| .+.| +++|+++|++||+
T Consensus 154 ~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~------~aaiiie-p~~~~gg~~~~~~~~l~~l~~l~~~~g~ 219 (403)
T PRK05093 154 KYSDGFGPKPADITHVPF-------NDLAAVKAVIDDH------TCAVVVE-PIQGEGGVIPATPEFLQGLRELCDQHNA 219 (403)
T ss_pred hhhhcCCCCCCCcEEeCC-------CCHHHHHHHhcCC------eEEEEEe-cccCCCCCccCCHHHHHHHHHHHHHcCC
Confidence 11 112333332 2788999888543 3356666 444454 4433 9999999999999
Q ss_pred EEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCC
Q 048643 281 WVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDY 360 (506)
Q Consensus 281 ~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~ 360 (506)
++++|.+|.+.............++ ..|..+ .-|.++..+..|+++.++. +.+.+.. ....
T Consensus 220 ~lI~DEv~~g~g~~g~~~~~~~~~~-~pdi~s--~sK~l~~G~rig~vv~~~~--i~~~l~~---~~~~----------- 280 (403)
T PRK05093 220 LLIFDEVQTGMGRTGDLFAYMHYGV-TPDILT--SAKALGGGFPIGAMLTTAE--IASHFKV---GTHG----------- 280 (403)
T ss_pred EEEEechhhCCCCCccchhhhhcCC-CCCEEE--ecccccCCcceEEEEEcHH--HHhhcCC---CCCC-----------
Confidence 9999999986422111000001122 345444 4699986677888887643 2222221 0000
Q ss_pred CCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCC----CCc--c---ceEEEeecCCCcccccc
Q 048643 361 KDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDK----RVS--P---SAVMDKLKPKYENCHSQ 431 (506)
Q Consensus 361 ~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~----~~~--p---~~v~f~~~~~~~~~~~~ 431 (506)
.+. ++.+.....+..+|+.+-. .++.++..++.++|.+.|+++. -+. + .++.+.+.+..
T Consensus 281 --~t~-~~~~~~~~aa~a~L~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~G~~~~~~l~~~~------ 348 (403)
T PRK05093 281 --STY-GGNPLACAVAEAVFDIINT---PEVLEGVKARRQRFVDGLQKINQKYGVFSEIRGMGLLIGAELKPQY------ 348 (403)
T ss_pred --CCC-CCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhhCCCeEeEeeCceEEEEEecCcc------
Confidence 011 1111111222333333311 2445677778888888887651 111 2 22333332210
Q ss_pred cccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 048643 432 QLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAF 498 (506)
Q Consensus 432 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l 498 (506)
.....++.+.+.++|+. +.+ .+..++|+++. ...++++|+++++.|.++..++
T Consensus 349 ---------~~~~~~~~~~l~~~Gv~-v~~---~g~~~lRl~~~-~~~~~~~i~~~~~~l~~~l~~~ 401 (403)
T PRK05093 349 ---------KGRARDFLNAAAEEGVM-VLV---AGPDVLRFAPS-LVIEEADIDEGLARFEKAVAKV 401 (403)
T ss_pred ---------hhHHHHHHHHHHHCCeE-Eec---CCCCEEEEeCC-CCCCHHHHHHHHHHHHHHHHHh
Confidence 11245677888888864 333 24468999874 4457889999999999987654
No 281
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.56 E-value=4.3e-12 Score=130.89 Aligned_cols=294 Identities=14% Similarity=0.066 Sum_probs=161.8
Q ss_pred HHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCC
Q 048643 134 ENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGI 213 (506)
Q Consensus 134 E~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~ 213 (506)
..++.+.|+++.+.+ ..++++|||+||..|+.++|.....+ |..+ ++.+|......|-+..-+....|.
T Consensus 75 ~~~la~~l~~~~~~~---------~v~~~~sGseA~~~al~~ar~~~~~~-G~~~-r~~vi~~~~~yhg~~~~~~~~~~~ 143 (389)
T PRK01278 75 QERLAERLVENSFAD---------KVFFTNSGAEAVECAIKTARRYHYGK-GHPE-RYRIITFEGAFHGRTLATIAAGGQ 143 (389)
T ss_pred HHHHHHHHHhhCCCC---------EEEEcCCcHHHHHHHHHHHHHHHHhc-CCCC-CCEEEEECCCcCCCcHHHHhccCC
Confidence 334556667765432 57999999999999999998753321 1110 234555555566554444433332
Q ss_pred CCCCeE--EEecCCCCCc----ccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc----cChhHHHHHHHHhCCEEE
Q 048643 214 DLKNFR--AIKTTKSSSY----GLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV----DPLKPLCDVAKQFGIWVH 283 (506)
Q Consensus 214 g~~~v~--~v~~~~~~~~----~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i----dpl~~I~~ia~~~g~~lh 283 (506)
. ..+ ..|..+ ++ ..|+++|+++++++ +.+|+++-..+++|.+ +.+++|+++|++||++++
T Consensus 144 ~--~~~~~~~~~~~--~~~~~~~~d~~~l~~~l~~~------~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI 213 (389)
T PRK01278 144 E--KYLEGFGPLVP--GFDQVPFGDIEALKAAITPN------TAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLI 213 (389)
T ss_pred h--hhcccCCCCCC--CceEeCCCCHHHHHHhhCCC------eEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEE
Confidence 1 011 011111 11 25899999988643 3366666556666633 579999999999999999
Q ss_pred eecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCc
Q 048643 284 VDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDW 363 (506)
Q Consensus 284 VDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~ 363 (506)
+|++|.|+......+.....++ ..|.++ ..|.++..+..|+++.+++ +.+.+.... . . .
T Consensus 214 ~DEv~~g~g~~g~~~~~~~~~~-~pdi~t--~sK~l~~G~~ig~~~~~~~--~~~~~~~~~----~----------~--~ 272 (389)
T PRK01278 214 FDEVQCGMGRTGKLFAHEWAGV-TPDIMA--VAKGIGGGFPLGACLATEE--AAKGMTPGT----H----------G--S 272 (389)
T ss_pred EeccccCCCcCCcceeecccCC-CCCEEE--EehhccCCcceEEEEEcHH--HHhccCCCC----C----------C--C
Confidence 9999986532111111111133 346544 4698886677888877643 222221100 0 0 0
Q ss_pred cccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHc----CCCC-c---c--ceEEEeecCCCcccccccc
Q 048643 364 QITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVAS----DKRV-S---P--SAVMDKLKPKYENCHSQQL 433 (506)
Q Consensus 364 ~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~----~~~~-~---p--~~v~f~~~~~~~~~~~~~~ 433 (506)
+. ++.+.....+..+|+.+-.+. ..++..++.+++++++++ .+++ . + .++.+.+...
T Consensus 273 t~-~~~~~~~aaa~a~l~~l~~~~---~~~~~~~~~~~l~~~l~~l~~~~~~~~~~v~g~G~~~~i~~~~~--------- 339 (389)
T PRK01278 273 TY-GGNPLAMAVGNAVLDVILAPG---FLDNVQRMGLYLKQKLEGLVDRFPDVIEEVRGKGLLLGLKCVVP--------- 339 (389)
T ss_pred CC-CccHHHHHHHHHHHHHHhhhH---HHHHHHHHHHHHHHHHHHHHhhCCCceeeEecccEEEEEEEecC---------
Confidence 11 111112223333354442222 334444555555555543 3322 1 2 2222333111
Q ss_pred cchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 048643 434 VTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEA 497 (506)
Q Consensus 434 ~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~ 497 (506)
..++.+.+.++|+.. .+. +..++|+++. ...++++|+++++.|+++.++
T Consensus 340 ----------~~~~~~~l~~~GV~~-~p~---~~~~lR~~p~-~~~~~~~i~~~l~~l~~~l~~ 388 (389)
T PRK01278 340 ----------NRDLVQALRDEGLLT-VGA---GDNVVRLLPP-LIITEEEIDEALERLERAAES 388 (389)
T ss_pred ----------HHHHHHHHHHCCeEE-eec---CCCEEEEeCC-cccCHHHHHHHHHHHHHHHHh
Confidence 346777777788753 332 3468999973 345788999999999887654
No 282
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.55 E-value=3.2e-12 Score=132.10 Aligned_cols=298 Identities=11% Similarity=0.058 Sum_probs=167.5
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCC-CeEEEeCCCCchHHHHHHH
Q 048643 131 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENIS-KLVVYGSDQTHCALQKAAQ 209 (506)
Q Consensus 131 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~-~~~v~~s~~~H~s~~ka~~ 209 (506)
.....++.++++++.|.+ ..++++||++|+..|+.+++...-+ .+.+ ..++......|-...-+..
T Consensus 80 ~~~~~~la~~l~~~~~~~---------~v~~~~gg~eA~~~al~~a~~~~~~----~~~~~~~ii~~~~~yhg~~~~~~~ 146 (396)
T PRK02627 80 IEPQEELAEKLVELSGMD---------KVFFCNSGAEANEAAIKLARKYGHK----KGIEKPEIITAENSFHGRTLATLS 146 (396)
T ss_pred CHHHHHHHHHHHhhcCCC---------EEEECCCcHHHHHHHHHHHHHHhcc----cCCCCCeEEEECCCcCcccHHHHH
Confidence 456667778888887763 5799999999999999998764211 0111 3344445555644444433
Q ss_pred HhCCCCCCeEEEecCCCCCc----ccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCc-c---cChhHHHHHHHHhCCE
Q 048643 210 IVGIDLKNFRAIKTTKSSSY----GLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITA-V---DPLKPLCDVAKQFGIW 281 (506)
Q Consensus 210 ~~G~g~~~v~~v~~~~~~~~----~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~-i---dpl~~I~~ia~~~g~~ 281 (506)
..+.........|... +. ..|+++|++++.+. +.+|+++...+++|. + +.+++|.++|++||++
T Consensus 147 ~~~~~~~~~~~~~~~~--~~~~~~~~d~~~l~~~i~~~------~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~ 218 (396)
T PRK02627 147 ATGQPKYQEGFEPLVE--GFIYVPFNDIEALKAAITDK------TAAVMLEPIQGEGGVNPADKEYLQALRELCDENGIL 218 (396)
T ss_pred hcCCccccccCCCCCC--CceEeCCCCHHHHHHhcCCC------eEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCE
Confidence 3332100001112111 11 22899999988432 346777666677773 3 3489999999999999
Q ss_pred EEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCC
Q 048643 282 VHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYK 361 (506)
Q Consensus 282 lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~ 361 (506)
+++|++|+++............++ ..|.++ ..|.++..+..|+++.++. +.+.+... .. ..
T Consensus 219 lI~DE~~~g~g~~g~~~~~~~~~~-~pdi~t--~sK~~~~G~rig~~~~~~~--~~~~~~~~----~~----------~~ 279 (396)
T PRK02627 219 LILDEVQTGMGRTGKLFAYQHYGI-EPDIMT--LAKGLGGGVPIGAVLAKEK--VADVFTPG----DH----------GS 279 (396)
T ss_pred EEEechhcCCCccCceeeehhcCC-CCCEEE--EcchhhCCcccEEEEEcHH--HHhccCCC----CC----------CC
Confidence 999999986532111000001122 346555 4599986677888887643 22222210 00 00
Q ss_pred CccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHc----CCCCc--c---ceEEEeecCCCccccccc
Q 048643 362 DWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVAS----DKRVS--P---SAVMDKLKPKYENCHSQQ 432 (506)
Q Consensus 362 ~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~----~~~~~--p---~~v~f~~~~~~~~~~~~~ 432 (506)
+. +........+..+++.+..+ ++.++..++.+++.+.|.+ .|.+. + .++.+++...
T Consensus 280 --t~-~~~~~~~~aa~~~l~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~~-------- 345 (396)
T PRK02627 280 --TF-GGNPLACAAALAVIEIIEEE---GLLENAAEVGEYLRAKLRELLEKYPGIKEVRGLGLMIGIELDRP-------- 345 (396)
T ss_pred --CC-CCCHHHHHHHHHHHHHHhhc---cHHHHHHHHHHHHHHHHHHHHHhCCCeeeeccCcEEEEEEecCc--------
Confidence 00 11111122233334433222 3445555566666666544 33332 1 3455554211
Q ss_pred ccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 048643 433 LVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAF 498 (506)
Q Consensus 433 ~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l 498 (506)
..++.+++.++|+. +.+. +..++|+++. ...++++|+++++.|+++.+++
T Consensus 346 -----------~~~~~~~l~~~Gv~-v~~~---~~~~lRi~~~-~~~~~~~i~~~~~~l~~~l~~~ 395 (396)
T PRK02627 346 -----------AAEIVKKALEKGLL-INVT---GDNVLRLLPP-LIISKEEIDEAVDRLEEVLKEL 395 (396)
T ss_pred -----------HHHHHHHHHHCCeE-Eeec---CCCEEEEECC-cccCHHHHHHHHHHHHHHHHhh
Confidence 35677777778864 4432 2367999873 4567889999999999887654
No 283
>PLN02624 ornithine-delta-aminotransferase
Probab=99.55 E-value=1.5e-11 Score=129.53 Aligned_cols=303 Identities=11% Similarity=0.019 Sum_probs=171.8
Q ss_pred HHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhC
Q 048643 133 LENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVG 212 (506)
Q Consensus 133 lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G 212 (506)
...++.+.|++++|++ ..+++++|++||..|+..||.....+.|....+..+|.+....|-...-+..+.|
T Consensus 118 ~~~~la~~L~~~~~~~---------~~~f~~SGseA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~ 188 (474)
T PLN02624 118 KFPEFAEYLTSMFGYD---------MVLPMNTGAEGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSC 188 (474)
T ss_pred HHHHHHHHHHhhcCCC---------eEEEeCChHHHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCC
Confidence 3344556677777653 4688999999999999999975332211111122344455445543222322222
Q ss_pred CC---------CCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC----hhHHHHHHHHhC
Q 048643 213 ID---------LKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP----LKPLCDVAKQFG 279 (506)
Q Consensus 213 ~g---------~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp----l~~I~~ia~~~g 279 (506)
-. ...+..+|. -|++.|++.++. .+....+|++....+++|.+-| |++|.++|++||
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~---~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~g 258 (474)
T PLN02624 189 DNEATRGFGPLLPGHLKVDF-------GDLDALEKIFEE---DGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHN 258 (474)
T ss_pred CccccccCCCCCCCceEeCC-------CCHHHHHHHHHh---CCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcC
Confidence 10 012333332 278899998864 2234567888888889999877 999999999999
Q ss_pred CEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCC-CcceEEEEeCchhHHhhhcCCccccCCccccCCCcc
Q 048643 280 IWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVV 358 (506)
Q Consensus 280 ~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~ 358 (506)
+++++|++|.|+......+.....++ ..|.++++ |.++.+ +.+|.++.++ +.. ..+... ...
T Consensus 259 illI~DEv~tG~GrtG~~~a~~~~~i-~pDiv~ls--K~lggG~~pigav~~~~-~i~-~~~~~~--~~~---------- 321 (474)
T PLN02624 259 VLMIADEIQTGLARTGKMLACDWEEV-RPDVVILG--KALGGGVIPVSAVLADK-DVM-LCIKPG--EHG---------- 321 (474)
T ss_pred CEEEEeccccCcCcCcchhhHHhcCC-CCCEEEec--ccccCCCCcceeeeecH-HHH-hHhccC--CcC----------
Confidence 99999999986422111111111233 56878864 988876 5788887754 222 222110 000
Q ss_pred CCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHc----CCC-Cc---c--ceEEEeecCCCccc
Q 048643 359 DYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVAS----DKR-VS---P--SAVMDKLKPKYENC 428 (506)
Q Consensus 359 ~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~----~~~-~~---p--~~v~f~~~~~~~~~ 428 (506)
.++ ++-+.....+-++|..+..++ +.++..++.++|++.|++ .+. +. + .++.+.+....
T Consensus 322 ----~T~-~g~pl~~aaa~aaLe~l~~~~---l~~~~~~~~~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i~l~~~~--- 390 (474)
T PLN02624 322 ----STF-GGNPLASAVAMAALQVVQDEK---LAERSAKLGQELRDQLQKIQKQFPKLIKEVRGRGLLNAVVLNSPK--- 390 (474)
T ss_pred ----CCC-CCCHHHHHHHHHHHHHHHhch---HHHHHHHHHHHHHHHHHHHHHhCCCceEEEEeeEEEEEEEecCCC---
Confidence 011 111112223334444443332 344555666677666655 332 22 2 33333332210
Q ss_pred ccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 048643 429 HSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEA 497 (506)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~ 497 (506)
. + .....++.+.|.+.|+. +.+. +..++|++. +...++++|+++++.|+++.+.
T Consensus 391 -----~-~----~~~a~~~~~~L~e~GV~-v~p~---~~~~lR~~p-~l~~t~e~id~~l~~L~~~l~~ 444 (474)
T PLN02624 391 -----L-G----PVSAYDVCLKLKERGLL-AKPT---HDTIIRLAP-PLSISEDELQECSKALSDVLEH 444 (474)
T ss_pred -----c-C----hHHHHHHHHHHHhCCeE-EecC---CCCEEEEEC-CccCCHHHHHHHHHHHHHHHHH
Confidence 0 0 12235677778788864 4432 456899997 4667889999999999877544
No 284
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.55 E-value=2.5e-12 Score=133.81 Aligned_cols=335 Identities=13% Similarity=0.048 Sum_probs=182.7
Q ss_pred HHHHHHHHHhhcCCC-----CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHH
Q 048643 106 AGFLGEMLSSGFNVV-----GFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRV 180 (506)
Q Consensus 106 ~~~~~~~l~~~~n~~-----~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~ 180 (506)
...+.+.+...++.. ...|....+..++.+.+.+|+.+.+|.+.+. ...++|+|+++++..++.+....
T Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~-----~~I~it~Ga~~al~~~~~~l~~~- 120 (416)
T PRK09440 47 EDYFRDLLADLLASGKLTEALGNYDGPQGKDELIEALAALLNERYGWNISP-----QNIALTNGSQSAFFYLFNLFAGR- 120 (416)
T ss_pred HHHHHHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCh-----hhEEEccChHHHHHHHHHHHhcc-
Confidence 345555555555432 1245544556789999999999888865432 37889999888876655543321
Q ss_pred HHhhcccCCCCeEEEe-CCCCchHHHHHHHHhCC-CCCCeEEEecCCCC-CcccCHHHHHHHHHHHHhcCCccEEEEEec
Q 048643 181 LNKIGRENISKLVVYG-SDQTHCALQKAAQIVGI-DLKNFRAIKTTKSS-SYGLSPDSLLTQINLDVEAGLVPLFLCATI 257 (506)
Q Consensus 181 ~~~~~~~~~~~~~v~~-s~~~H~s~~ka~~~~G~-g~~~v~~v~~~~~~-~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~ 257 (506)
+.+ .++..|++ ...+++.+...+...|. -....+.++++.++ ++.+|++.|+ +.+ .+.+++++.
T Consensus 121 ----~~~-~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~~------~~~~i~l~~ 187 (416)
T PRK09440 121 ----RAD-GSLKKILFPLAPEYIGYADAGLEEDLFVSYRPNIELLPEGQFKYHVDFEHLH--IDE------DTGAICVSR 187 (416)
T ss_pred ----ccC-CCCCeEEEecCCCchhhHHHhhccCceeecccccccccccccccCCCHHHcc--cCC------CceEEEEec
Confidence 000 03445666 46777766665543332 00022334443221 3689999987 221 235788889
Q ss_pred cCCCCCcccC---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCch
Q 048643 258 GTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPS 334 (506)
Q Consensus 258 gtt~tG~idp---l~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~ 334 (506)
++|+||.+-+ +++|+++|++|++|+++|.+|+-..- ...+.........--.+..++.|++....-+|+++. ++.
T Consensus 188 P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~-~~~~~~~~~~~~~~vI~~~SfSK~~~pGlRiG~~i~-~~~ 265 (416)
T PRK09440 188 PTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFP-GIIFSEATPLWNPNIILCMSLSKLGLPGVRCGIVIA-DEE 265 (416)
T ss_pred CCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCC-CcchhhcCccccCCeEEEecccccCCCcceEEEEeC-CHH
Confidence 9999999955 78889999999999999999963211 000111100000111334678997555577887765 333
Q ss_pred hHHhhhcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHH-----HHHHHHHHHHHHHHHHHcC
Q 048643 335 ALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRH-----FLRSHVNMAKLFERLVASD 409 (506)
Q Consensus 335 ~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~-----~i~~~~~~a~~l~~~l~~~ 409 (506)
.. +.+.....+.. .....+...++.+.+....+.+ +.+...+..+.+.+.|.+.
T Consensus 266 l~-~~~~~~~~~~~--------------------~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~ 324 (416)
T PRK09440 266 II-EALSNMNGIIS--------------------LAPGRLGPAIAAEMIESGDLLRLSETVIRPFYRQKVQLAIALLRRY 324 (416)
T ss_pred HH-HHHHHHHHHhc--------------------cCCCcHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 32 23321100100 0012233344444442222222 2223344455555666542
Q ss_pred -C--CCc---c---ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeE-CC--------EEEEE
Q 048643 410 -K--RVS---P---SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVC-GG--------IYAMR 471 (506)
Q Consensus 410 -~--~~~---p---~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~-~g--------~~~lR 471 (506)
+ +++ | ..+.+++.+... + ..++.+.+.+.|+....+..+ .+ ..++|
T Consensus 325 l~~~~~~~~~p~gg~fiw~~~~~~~~--------------~--~~~~~~~l~~~gV~v~pg~~F~~~~~~~~~~~~~~iR 388 (416)
T PRK09440 325 LPDEPCLIHKPEGAIFLWLWFKDLPI--------------T--TEELYQRLKARGVLVVPGHYFFPGLDEDWPHAHQCIR 388 (416)
T ss_pred cccCCeEEecCCCceEEEEECCCCCC--------------C--HHHHHHHHHHCCEEEechHhhCCCCccccCCcCceEE
Confidence 2 343 4 333333332100 1 234556666777754433322 11 25899
Q ss_pred EEecCCCCCHHHHHHHHHHHHHHHHHHHcc
Q 048643 472 FAVGATLTEERHVMVAWTMVQEQLEAFLTT 501 (506)
Q Consensus 472 ~~~~~~~tt~edi~~li~~l~~~~~~l~~~ 501 (506)
++++. ++++++++++.|.++.+++..+
T Consensus 389 is~~~---~~~~l~~~i~~l~~~~~~~~~~ 415 (416)
T PRK09440 389 MNYVQ---DDEEIEKGIAILAEEVEKAYAE 415 (416)
T ss_pred EEecC---CHHHHHHHHHHHHHHHHHHhhc
Confidence 99963 5789999999999988776543
No 285
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.54 E-value=5.8e-12 Score=128.52 Aligned_cols=315 Identities=14% Similarity=0.103 Sum_probs=183.2
Q ss_pred cccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCc
Q 048643 122 FNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTH 201 (506)
Q Consensus 122 ~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H 201 (506)
..|..+|...+||+. +++++|.+ ..+.+++||.|+..+..+.. + ++.+| +...|
T Consensus 72 d~Yagd~s~~~LE~~----vAe~lG~e---------~aV~v~sGTaAl~ll~~l~v----~-------pGd~V--p~n~~ 125 (460)
T PRK13237 72 EAYAGSRNFYHLEET----VQEYYGFK---------HVVPTHQGRGAENLLSRIAI----K-------PGQYV--PGNMY 125 (460)
T ss_pred hhhcCCCcHHHHHHH----HHHHHCCC---------eEEEeCCHHHHHHHHHHhCC----C-------CcCEE--CCccc
Confidence 468889999999977 55666765 35889999988876422111 1 34443 66778
Q ss_pred hHHHHH-HHHhCCCCCCeEEEecC--------CCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCC-c---ccCh
Q 048643 202 CALQKA-AQIVGIDLKNFRAIKTT--------KSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAIT-A---VDPL 268 (506)
Q Consensus 202 ~s~~ka-~~~~G~g~~~v~~v~~~--------~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG-~---idpl 268 (506)
+.-.++ ....|. .++-+..+ ...+|.||++.|+++|++... ..+.+|+++..++..| . .+++
T Consensus 126 f~Tt~ahI~~~Ga---~fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~--~~~~lV~a~itvn~~GGqpvs~~~m 200 (460)
T PRK13237 126 FTTTRYHQELNGG---IFVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVGA--ENIAYICLAVTVNLAGGQPVSMANM 200 (460)
T ss_pred hHhhHHHHHhCCc---EEEeeecccccccccCCCCCCCcCHHHHHHHhccccC--CccCceEEEEecccCCCeeCCHHhH
Confidence 877776 556666 44433211 113589999999999985422 1233456666666664 3 3589
Q ss_pred hHHHHHHHHhCCEEEeecccccc-cccC----ccchhhh-----c-CCCCCCeeEEcCccccCCCCcceEEEEeCchhHH
Q 048643 269 KPLCDVAKQFGIWVHVDAAYAGS-ACIC----PEFQHFI-----D-GVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALV 337 (506)
Q Consensus 269 ~~I~~ia~~~g~~lhVDaA~gg~-~~~~----~~~~~~~-----~-gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~ 337 (506)
++|.++|++||+++|.|+|+... +.+. +.+...- . -...+|.+++|+||.+.+|. .|++++++++...
T Consensus 201 ~~I~elA~~~Gl~Vi~DaAra~gna~fI~~re~~y~~~~i~ei~~e~~s~aD~~t~S~~K~~~~~~-GG~i~t~D~eL~~ 279 (460)
T PRK13237 201 RAVRELCDKHGIKVFFDATRCVENAYFIKEREEGYQDKSIKEIVHEMFSYADGCTMSGKKDCLVNI-GGFLAMNDEELFD 279 (460)
T ss_pred HHHHHHHHHcCCEEEEECcchhcChhhhcccccccCCCcHhHHhhhccCcCcEEEEeCCCCCCCCC-ceEEEECCHHHHH
Confidence 99999999999999999998654 2222 1222211 1 12479999999999999987 6788888887655
Q ss_pred hhhcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c
Q 048643 338 SSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS---P 414 (506)
Q Consensus 338 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p 414 (506)
+.-.....|-.. ..++. -.+|...+++ ..|...- -...+++....++||.+.|.+. |+. |
T Consensus 280 ~~r~~~~~~eG~--------~tygg---~~grd~~alA--vgl~E~~---~~~y~~~ri~~~~~l~~~L~~~-Gvpv~~p 342 (460)
T PRK13237 280 EAKELVVVYEGM--------PSYGG---MAGRDMEAMA--IGIEESV---QYEYIEHRVGQVRYLGEKLLAA-GVPIVEP 342 (460)
T ss_pred HHHHhccccCCC--------cCCCC---hhhhHHHHHH--hHHHhhc---hHHHHHHHHHHHHHHHHHHHHC-CCceecC
Confidence 433222222110 11110 1123322221 2232211 1267778888999999999886 554 5
Q ss_pred -ceEEEee-----cCCCcccccccccchHHHHHHHHHHHHHHHHh-cCcEEEeeeeE-------------CCEEEEEEEe
Q 048643 415 -SAVMDKL-----KPKYENCHSQQLVTEEEAINEFNRELLESINA-SGKAYMTHAVC-------------GGIYAMRFAV 474 (506)
Q Consensus 415 -~~v~f~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~-------------~g~~~lR~~~ 474 (506)
.--++.+ .|.- + .+ .--.+.|...|.. .|+=-+--+.+ ..-..+|+++
T Consensus 343 ~ggH~v~vda~~~lph~----~------~~--~~p~~al~~~ly~~~GiR~~e~g~~~~~~~~~~~~~~~~~~el~rlai 410 (460)
T PRK13237 343 VGGHAVFLDARRFLPHL----P------QD--QFPAQALAAELYIESGVRSMERGIVSAGRDPKTGENHYPKLELVRLTI 410 (460)
T ss_pred CCceEEEEEhHHhCCCC----C------cc--cChHHHHHHHHHHHhCcCeEeecceecccCCCCCccCCCccceeeecc
Confidence 2222222 1210 0 00 0012334333332 34311111111 1136799998
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHH
Q 048643 475 GATLTEERHVMVAWTMVQEQLEA 497 (506)
Q Consensus 475 ~~~~tt~edi~~li~~l~~~~~~ 497 (506)
-----|.+++|.+.+.|..+.++
T Consensus 411 prr~yt~~h~~~v~~~~~~~~~~ 433 (460)
T PRK13237 411 PRRVYTYAHMDVVADSVIKLYKH 433 (460)
T ss_pred ccccccHHHHHHHHHHHHHHHHh
Confidence 43334567999999999887654
No 286
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.53 E-value=9e-12 Score=125.86 Aligned_cols=274 Identities=12% Similarity=0.077 Sum_probs=168.4
Q ss_pred hhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHH
Q 048643 128 PAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKA 207 (506)
Q Consensus 128 p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka 207 (506)
++...+++. +++.+|++.+ ..++|+|+++++...+.+. ++..|+++...|..+...
T Consensus 55 ~g~~~lr~~----ia~~~~~~~~-------~I~~t~G~~~~l~~~~~~~-------------~gd~V~v~~P~y~~~~~~ 110 (337)
T PRK03967 55 ITSDPLREA----IAEFYGLDAE-------NIAVGNGSDELISYLVKLF-------------EGKHIVITPPTFGMYSFY 110 (337)
T ss_pred CCHHHHHHH----HHHHhCcCcc-------eEEEcCCHHHHHHHHHHHh-------------CCCeEEEeCCChHHHHHH
Confidence 344555554 5555566554 7889999888764433221 334577788888888888
Q ss_pred HHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecc
Q 048643 208 AQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAA 287 (506)
Q Consensus 208 ~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA 287 (506)
++..|+ +++.|+.+. ++.+|++.|++++. . ..+++.+.++|+||.+-+.++|.++|+ +++++++|.+
T Consensus 111 ~~~~g~---~~~~v~~~~--~~~~d~~~l~~~~~-~------~~~v~~~~P~NPtG~~~~~~~l~~i~~-~~~~ii~De~ 177 (337)
T PRK03967 111 AKLNGI---PVIDVPLKE--DFTIDGERIAEKAK-N------ASAVFICSPNNPTGNLQPEEEILKVLE-TGKPVVLDEA 177 (337)
T ss_pred HHHcCC---eEEEeecCC--CCCcCHHHHHHhcc-C------CCEEEEeCCCCCCCCCCCHHHHHHHHh-cCCEEEEECc
Confidence 899999 999999874 47899999987642 1 125667899999999999999999995 7999999999
Q ss_pred cccccccCccchhhhcCCCCCCeeEEcCccccC-CCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCcccc
Q 048643 288 YAGSACICPEFQHFIDGVEGADSFSLNAHKWFF-TTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQIT 366 (506)
Q Consensus 288 ~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~ 366 (506)
|..+. ...........+. -.+..++.|.++ ....+|+++.. +.. .+.+...... ++
T Consensus 178 y~~~~--~~~~~~~~~~~~~-vi~l~S~SK~~~l~GlRiG~iv~~-~~~-i~~~~~~~~~----------------~~-- 234 (337)
T PRK03967 178 YAEFS--GKSLIGLIDEYPN-LILLRTFSKAFGLAGIRAGYAIAN-EEI-IDALYRIKPP----------------FS-- 234 (337)
T ss_pred hhhhc--ccchHHHHhhCCC-EEEEecchHhhcchhhhheeeecC-HHH-HHHHHhhcCC----------------CC--
Confidence 97542 1111111111111 134567899998 44778888764 332 2333211100 00
Q ss_pred CCCCCCchHHHHHHHHhc-hhHHHHHHHHHHHHHHHHHHHHHcCCCCcc---ceEEEeecCCCcccccccccchHHHHHH
Q 048643 367 LSRRFRSLKLWLVIRNYG-VANLRHFLRSHVNMAKLFERLVASDKRVSP---SAVMDKLKPKYENCHSQQLVTEEEAINE 442 (506)
Q Consensus 367 ~sr~~~al~~~~~l~~~G-~~g~~~~i~~~~~~a~~l~~~l~~~~~~~p---~~v~f~~~~~~~~~~~~~~~~~~~~~~~ 442 (506)
..++...++...+. .+.+.+.+++..+..+.+.+.|.+. .+ | +.+.+++
T Consensus 235 ----~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~-~~~~~~~~~~~--------------------- 287 (337)
T PRK03967 235 ----LNILTMKIVRLALDHYDLIEERIDYIIKERERVRRELGEY-AY-PSDANFLLLKL--------------------- 287 (337)
T ss_pred ----CCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhccC-cC-CCCCcEEEEhH---------------------
Confidence 01222233333332 2345555566666677777777654 12 3 3222211
Q ss_pred HHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 048643 443 FNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLE 496 (506)
Q Consensus 443 ~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~ 496 (506)
.+.+.|.++|+ .+.+.......++|+++. +.++.++++++|+++.+
T Consensus 288 ---~~~~~l~~~gi-~v~~~~~~~~~~~Ri~~~----~~~~~~~l~~~l~~~~~ 333 (337)
T PRK03967 288 ---DAYDYLLENGI-VVRKLSGRLEGHIRVTVG----KREENDEFIKALKEIKE 333 (337)
T ss_pred ---HHHHHHHHCCE-EEEeCCCCCCCeEEEecC----CHHHHHHHHHHHHHHHH
Confidence 14566667775 443332233568999985 45688899988887754
No 287
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.53 E-value=8.3e-12 Score=128.49 Aligned_cols=305 Identities=12% Similarity=0.011 Sum_probs=181.3
Q ss_pred hHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHH
Q 048643 130 ATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQ 209 (506)
Q Consensus 130 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~ 209 (506)
..+.+.++.+++++..+++ ..+++++||+||..|+..+|....+ +.. .++.+|......|-+..-++.
T Consensus 76 ~~~~~~~la~~l~~~~~~~---------~v~f~~SGseA~e~Aik~ar~~~~~--~~~-~r~~ii~~~~~yHG~t~~~~~ 143 (395)
T PRK03715 76 YNEPMAKLAGLLTQHSCFD---------KVFFANSGAEANEGAIKLARKWGRK--HKN-GAYEIITFDHSFHGRTLATMS 143 (395)
T ss_pred cCHHHHHHHHHHhhccCCC---------EEEEeCCcHHHHHHHHHHHHHHhhc--cCC-CCcEEEEECCCcCCChHHHHh
Confidence 3567777788888765432 5799999999999999999864211 101 134466667778888777776
Q ss_pred HhCCCCCCeEEEecCCCC--CcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC----hhHHHHHHHHhCCEEE
Q 048643 210 IVGIDLKNFRAIKTTKSS--SYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP----LKPLCDVAKQFGIWVH 283 (506)
Q Consensus 210 ~~G~g~~~v~~v~~~~~~--~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp----l~~I~~ia~~~g~~lh 283 (506)
..|....+....|....- .-..|+++|++.+.+. ..+|++.......|.+-| +++|.++|++||++++
T Consensus 144 ~s~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~------~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI 217 (395)
T PRK03715 144 ASGKPGWDTIFAPQVPGFPKAELNDIASVEKLITDK------TVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLI 217 (395)
T ss_pred hcCCcccccCCCCCCCCceeeCCchHHHHHHHcCCC------ceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEE
Confidence 665421111111111000 0024788998888532 346777766677787766 9999999999999999
Q ss_pred eecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCc
Q 048643 284 VDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDW 363 (506)
Q Consensus 284 VDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~ 363 (506)
+|+++.|+.....-+.....++ ..|.+++. |.++..++.|.++++++-. .+. +.+..+
T Consensus 218 ~DEv~tG~GRtG~~~a~~~~gv-~PDi~t~g--K~lg~G~p~~av~~~~~i~---~~~--~~~~~~-------------- 275 (395)
T PRK03715 218 VDEVQTGCGRTGTLFAYELSGI-EPDIMTLG--KGIGGGVPLAALLAKAEVA---VFE--AGDQGG-------------- 275 (395)
T ss_pred EeccccCCCCCcchhhHhhcCC-CCceeeeh--hhhhCCcceEEEEEccccc---ccc--CCCcCC--------------
Confidence 9999987432221111111234 47877764 9888767788888775431 111 111100
Q ss_pred cccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcC---CCCc-c----ceEEEeecCCCcccccccccc
Q 048643 364 QITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASD---KRVS-P----SAVMDKLKPKYENCHSQQLVT 435 (506)
Q Consensus 364 ~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~---~~~~-p----~~v~f~~~~~~~~~~~~~~~~ 435 (506)
|. .+.+........+|..+-. .+++++..++.++|.+.|+++ .++. . .++.+.+....
T Consensus 276 T~-~g~pl~~aaala~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~~~i~~vrG~Glm~~i~l~~~~---------- 341 (395)
T PRK03715 276 TY-NGNPLMTAVGVAVISQLLA---PGFLEGVRARGEYLKEKLLELSEERGLEGERGEGLLRALLLGKDI---------- 341 (395)
T ss_pred CC-CCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHhhcCCcCeEEcceeEEEEEecCch----------
Confidence 11 1112223344555555533 345677788888888888753 1233 1 44444443210
Q ss_pred hHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 048643 436 EEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAF 498 (506)
Q Consensus 436 ~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l 498 (506)
.....+....+.++|.. +... +...+|++. +...|+++|+++++.|+++.+++
T Consensus 342 -----~~~~~~~~~~~~~~Gi~-~~~~---~~~~lR~~p-~l~~t~~ei~~~~~~l~~~l~~~ 394 (395)
T PRK03715 342 -----GPQIVEKARDMQPDGLL-LNAP---RPNLLRFMP-ALNVTTEEIDQMIAMLRSVLDKL 394 (395)
T ss_pred -----HHHHHHHHHhccCCCEE-Eeec---CCCEEEEeC-CcccCHHHHHHHHHHHHHHHHhh
Confidence 01111222333444764 3321 225799998 57788889999999999987754
No 288
>PRK07049 methionine gamma-lyase; Validated
Probab=99.53 E-value=7.8e-12 Score=129.76 Aligned_cols=223 Identities=13% Similarity=0.126 Sum_probs=151.6
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHH
Q 048643 126 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQ 205 (506)
Q Consensus 126 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 205 (506)
..|....+|+. ++++.|.+ ..++++||+.|+..++.+..+ ++..|+++...+....
T Consensus 81 ~~Pt~~~Le~~----lA~leg~~---------~~iv~~sG~~Ai~~~l~al~~-----------~Gd~Vv~~~p~Y~~~~ 136 (427)
T PRK07049 81 NHPNSEIVEDR----LAVYEGAE---------SAALFSSGMSAIATTLLAFVR-----------PGDVILHSQPLYGGTE 136 (427)
T ss_pred CCcCHHHHHHH----HHHHhCCC---------cEEEEccHHHHHHHHHHHHhC-----------CCCEEEEcCCCcccHH
Confidence 45666677755 66676643 468889999887766655443 5566778888776665
Q ss_pred HH----HHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHH----
Q 048643 206 KA----AQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQ---- 277 (506)
Q Consensus 206 ka----~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~---- 277 (506)
.. +..+|+ +++.++ + ..|+++|++++.+..+. ..+.+|++..++|++|.+-|+++|.++|++
T Consensus 137 ~~~~~~l~~~Gi---~~v~~~-~-----~~d~~~l~~~l~~~~~~-~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~ 206 (427)
T PRK07049 137 TLLAKTFRNFGV---GAVGFA-D-----GLSEAAIGAAAEAAAAK-GRVSLILIETPANPTNSLVDVAAVRRVADAIEAR 206 (427)
T ss_pred HHHHHHHHhcCc---EEEEEe-C-----CCCHHHHHHHHHhhccC-CCceEEEEECCCCCCCcccCHHHHHHHHHHhhhc
Confidence 54 345677 766665 1 35788898888754321 135588888999999999999999999988
Q ss_pred --hCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCC-C-CcceEEEEeCchhHHhhhcCCccccCCcccc
Q 048643 278 --FGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFT-T-LDCCCLWVKDPSALVSSLSTNPEYLKNKATE 353 (506)
Q Consensus 278 --~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~-p-~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~ 353 (506)
++++++||.+|.+.....+ . . .++|.+..++.|+++. + .-+|+++ .+++. .+.+.....+
T Consensus 207 ~~~~~~vvvDety~~~~~~~p-l----~--~g~divv~S~SK~~gG~~glr~G~vv-~~~~l-~~~l~~~~~~------- 270 (427)
T PRK07049 207 QGHRPIIACDNTLLGPVFQKP-L----E--HGADLSVYSLTKYVGGHSDLVAGAVL-GRKAL-IRQVRALRSA------- 270 (427)
T ss_pred ccCCCEEEEECCccccccCCc-c----c--cCCCEEEEcCceeecCCCCcEEEEEE-CCHHH-HHHHHHHHHh-------
Confidence 8999999999876543221 1 1 1689999999999984 3 3456554 33332 2222111000
Q ss_pred CCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc
Q 048643 354 SKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS 413 (506)
Q Consensus 354 ~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~ 413 (506)
.+........|+.++.+ +.+..++++..+++..+.+.|+++|+++
T Consensus 271 -------------~g~~ls~~~a~l~~r~L--~tl~~R~~~~~~~a~~la~~L~~~p~V~ 315 (427)
T PRK07049 271 -------------IGTQLDPHSCWMLGRSL--ETLVLRMERANRNARAVAEFLRDHPKVE 315 (427)
T ss_pred -------------cCCCCCHHHHHHHHcCC--ChHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 11122446677777755 5678888999999999999999887543
No 289
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.53 E-value=2.2e-11 Score=126.77 Aligned_cols=314 Identities=10% Similarity=-0.005 Sum_probs=175.1
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHH
Q 048643 131 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQI 210 (506)
Q Consensus 131 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~ 210 (506)
++.+.++.+.|++++.-.. ...+|+++||+|+..|+..||.....+ +..+ ++.+|......|-...-+...
T Consensus 84 ~~~~~~la~~l~~~~p~~~-------~~v~f~~sGseA~e~A~klar~~~~~~-~~~~-r~~ii~~~~~yHG~t~~~ls~ 154 (423)
T PRK05964 84 HEPAERLAQRLVALTPGGL-------DHVFFSDSGSVAVEVALKMALQYWRNR-GEPG-RSRFLSLRGGYHGDTIGTMSV 154 (423)
T ss_pred CHHHHHHHHHHHHhCCCCC-------CEEEEeCCcHHHHHHHHHHHHHHHHhc-CCCC-CcEEEEEcCCcCCccHHHHhc
Confidence 3445566778888763111 157899999999999999999763322 1111 233445555566433333332
Q ss_pred hCCC---------CCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEec-cCCCCCcc----cChhHHHHHHH
Q 048643 211 VGID---------LKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATI-GTTAITAV----DPLKPLCDVAK 276 (506)
Q Consensus 211 ~G~g---------~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~-gtt~tG~i----dpl~~I~~ia~ 276 (506)
.+-+ ...+..+|...++....++++|++.+.+. +.....|++.- .....|.+ +.+++|.++|+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~l~~~---~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~ 231 (423)
T PRK05964 155 GDRGGMHALYTPLLFEQVTAPFPPDGYEQATLDALEALLEKH---AGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICD 231 (423)
T ss_pred CCCccccccccCcCCCCEEeCCCcchhHHHHHHHHHHHHHhC---CCcEEEEEEecccccCCCcccCCHHHHHHHHHHHH
Confidence 2211 01234455432111122377888887642 22344455543 24445654 34999999999
Q ss_pred HhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCC-CcceEEEEeCchhHHhhhcCC---ccccCCccc
Q 048643 277 QFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSALVSSLSTN---PEYLKNKAT 352 (506)
Q Consensus 277 ~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~---~~yl~~~~~ 352 (506)
+||+++++|+++.|+.....-+.....++ ..|.++++ |+++.+ ++.|+++.++. . .+.+... ..++..
T Consensus 232 ~~g~llI~DEv~tg~gr~G~~~a~~~~~v-~pDi~~~~--K~l~gG~~p~~av~~~~~-i-~~~~~~~~~~~~~~~~--- 303 (423)
T PRK05964 232 RHGVLLIFDEIATGFGRTGTLFACEQAGV-SPDIMCLS--KGLTGGYLPLAATLCTAE-I-FEAFYSDDRAKAFMHS--- 303 (423)
T ss_pred HcCCEEEEechhhCCCcCcchhHHHhcCC-CCCeeeee--hhhhcCcccceEEEEcHH-H-HHhhhcCCcccccccC---
Confidence 99999999999976532211111111233 46776664 999877 57888766532 2 2333211 000100
Q ss_pred cCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCC---c--c---ceEEEeecCC
Q 048643 353 ESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRV---S--P---SAVMDKLKPK 424 (506)
Q Consensus 353 ~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~---~--p---~~v~f~~~~~ 424 (506)
.|+ .+.+.....+-.+++.+..+ ++.++..++.+++.+.|+++..+ . . .++.+.+...
T Consensus 304 ----------~T~-~~np~~~aaa~a~l~~l~~~---~~~~~~~~~g~~l~~~l~~l~~~~~i~~vrg~Gl~~~i~l~~~ 369 (423)
T PRK05964 304 ----------PSY-TANPLACAAANASLDLFEDE---PVLERVAALSAGLAEGLEPFRDLPGVADVRVLGAIGAVELDRP 369 (423)
T ss_pred ----------CCC-CcCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHhhccCCCeEEeecccEEEEEEeccC
Confidence 010 11111222333444444333 35567777888888888765332 2 1 4455555432
Q ss_pred CcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 048643 425 YENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAF 498 (506)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l 498 (506)
. . +.....+.+.+.++|++ +.+. + ..+|++. ....|++|||+++++++++.+++
T Consensus 370 ~------------~--~~~~~~l~~~l~~~Gv~-v~~~---~-~~lR~~p-~l~~t~edId~~v~~l~~al~~~ 423 (423)
T PRK05964 370 V------------L--ERDGPALRAFALERGVL-LRPL---G-NTIYLMP-PYIITAEELDRITDAIVEVADEL 423 (423)
T ss_pred c------------c--hhHHHHHHHHHHHCCeE-EEec---C-CEEEEeC-CcccCHHHHHHHHHHHHHHHhhC
Confidence 0 0 12346778888888874 4432 1 4799987 46678889999999999988764
No 290
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.52 E-value=1.6e-11 Score=127.19 Aligned_cols=298 Identities=13% Similarity=0.030 Sum_probs=173.8
Q ss_pred HHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCC
Q 048643 135 NIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGID 214 (506)
Q Consensus 135 ~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g 214 (506)
.++.+.|+++.+.+ ..+++++|++||..|+.+||.....+ +..+ +..++......|-+..-+..+.|..
T Consensus 84 ~~la~~l~~~~~~~---------~v~~~~sGseA~e~Alk~ar~~~~~~-~~~~-r~~ii~~~~~yHG~t~~~~~~~~~~ 152 (406)
T PRK12381 84 LRLAKKLIDATFAD---------RVFFCNSGAEANEAALKLARKYAHDR-YGSH-KSGIVAFKNAFHGRTLFTVSAGGQP 152 (406)
T ss_pred HHHHHHHHhhCCCC---------eEEEcCCcHHHHHHHHHHHHHHHhhc-CCCC-CCeEEEECCCcCCcchhHHhhcCCc
Confidence 34556677766542 57999999999999999998753221 1111 2345555666776655444444421
Q ss_pred C---------CCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCc-----ccChhHHHHHHHHhCC
Q 048643 215 L---------KNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITA-----VDPLKPLCDVAKQFGI 280 (506)
Q Consensus 215 ~---------~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~-----idpl~~I~~ia~~~g~ 280 (506)
. ..+..+| ..|+++|++.+.+. +.+|++. +-..+|. .+.+++|.++|++||+
T Consensus 153 ~~~~~~~~~~~~~~~~~-------~~d~~~l~~~l~~~------~aaviiE-Pv~~~gg~~~~~~~~l~~l~~l~~~~~~ 218 (406)
T PRK12381 153 KYSQDFAPLPPDIRHAA-------YNDLNSASALIDDQ------TCAVIVE-PIQGEGGVIPADKAFLQGLRELCDRHNA 218 (406)
T ss_pred ccccCCCCCCCCeeEeC-------CCCHHHHHHhccCC------eeEEEEe-CCcCCCCCcCCCHHHHHHHHHHHHHcCC
Confidence 0 1122222 24788999888542 3355555 4445554 3568999999999999
Q ss_pred EEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCC
Q 048643 281 WVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDY 360 (506)
Q Consensus 281 ~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~ 360 (506)
++++|.+|.|.......+.....++ ..|.++ .-|.++..+..|.++.++. +.+.+... ...
T Consensus 219 llI~DEv~tG~gr~G~~~~~~~~~v-~pDi~t--~sK~l~gG~~ig~~~~~~~--~~~~~~~~---~~~----------- 279 (406)
T PRK12381 219 LLIFDEVQTGVGRTGELYAYMHYGV-TPDVLT--TAKALGGGFPIGAMLTTEK--CASVMTVG---THG----------- 279 (406)
T ss_pred EEEEcchhhCCCCCcchhhhHhhCC-CCCEEE--ehhhhhCCCceEEEEEcHH--HHhhcCCC---CCC-----------
Confidence 9999999966532211111112233 356654 4699976677888887643 22333210 000
Q ss_pred CCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCC-CC---c-c----ceEEEeecCCCcccccc
Q 048643 361 KDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDK-RV---S-P----SAVMDKLKPKYENCHSQ 431 (506)
Q Consensus 361 ~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~-~~---~-p----~~v~f~~~~~~~~~~~~ 431 (506)
.++ .+.+.....+..+|+.+.. .++.++..++.++|.+.|+++. .+ . + .++.+.+.+.
T Consensus 280 --~t~-~~~pl~~aaa~a~l~~l~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~Gl~~~~~l~~~------- 346 (406)
T PRK12381 280 --TTY-GGNPLASAVAGKVLELINT---PEMLNGVKQRHDWFVERLNTINARYGLFSEIRGLGLLIGCVLNAE------- 346 (406)
T ss_pred --CCC-CCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhhCCCEEEEecCeEEEEEEecCc-------
Confidence 011 1112222333344444422 2466777788888888887651 11 1 1 2233333221
Q ss_pred cccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHccC
Q 048643 432 QLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAFLTTN 502 (506)
Q Consensus 432 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l~~~~ 502 (506)
.......+.+.+.++|+.. .+. +..++|+++ ....++++|+++++.|+++.+++.++.
T Consensus 347 --------~~~~~~~~~~~l~~~Gv~v-~~~---g~~~lRl~p-~~~~t~~~i~~~~~~l~~~l~~~~~~~ 404 (406)
T PRK12381 347 --------YAGKAKQISQEAAKAGVMV-LIA---GPNVVRFAP-ALNISEEEITTGLDRFARACERFVSRG 404 (406)
T ss_pred --------hhhHHHHHHHHHHHCCcEE-eeC---CCCEEEEeC-CccCCHHHHHHHHHHHHHHHHHHHhcc
Confidence 0123456778888888754 321 345899998 345678899999999999998887654
No 291
>PLN02397 aspartate transaminase
Probab=99.52 E-value=2.3e-11 Score=126.68 Aligned_cols=315 Identities=13% Similarity=0.067 Sum_probs=187.0
Q ss_pred HHHHHHHhhcCCC-CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcE--EEcCCch--HHHHHHHHHHHHHHHH
Q 048643 108 FLGEMLSSGFNVV-GFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGG--VIQGTTC--EAILCTLTAARDRVLN 182 (506)
Q Consensus 108 ~~~~~l~~~~n~~-~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g--~~t~ggt--~a~l~al~~ar~~~~~ 182 (506)
.+.+.....++.+ ...|....+..++.+.+.+|+.+..+.+... ... .-+.+|+ .+.+.++.+..+
T Consensus 70 ~~~~a~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~~~~~~~-----~~i~~~~i~~g~Ga~~l~~~~~~~~~---- 140 (423)
T PLN02397 70 VVRKAEQRLLAGSRNKEYLPIEGLAEFNKLSAKLAYGADSPAIKE-----NRVATVQCLSGTGSLRLGAEFLARFY---- 140 (423)
T ss_pred HHHHHHHHhhccCCCCCCCCcCCCHHHHHHHHHHHcCCCCchhhc-----CeeEeeecccchHHHHHHHHHHHHhC----
Confidence 4444443333322 3357777788999999999986543222110 011 1123333 233333332221
Q ss_pred hhcccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCC
Q 048643 183 KIGRENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAI 262 (506)
Q Consensus 183 ~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~t 262 (506)
++..|++++.++......++..|. +++.+|....+++.+|++.+++.+.+.. .+..+++.+.++|+|
T Consensus 141 -------pGd~Vlv~~P~y~~y~~~~~~~g~---~~~~v~l~~~~~~~~d~~~l~~~l~~~~---~~~~~i~~~~P~NPT 207 (423)
T PLN02397 141 -------PGSTIYIPNPTWGNHHNIFRDAGV---PVRTYRYYDPKTRGLDFDGLLEDLKAAP---DGSFVLLHACAHNPT 207 (423)
T ss_pred -------CCCEEEEeCCCchhHHHHHHHcCC---eEEEeecccCcCCccCHHHHHHHHHhCC---CCCEEEEeCCCCCCC
Confidence 567889999999999999999999 9999998322347899999998886431 134678888899999
Q ss_pred Ccc---cChhHHHHHHHHhCCEEEeecccccccccCc---cchh--hhcCCCCCCee-EEcCccccCC-CCcceEEE--E
Q 048643 263 TAV---DPLKPLCDVAKQFGIWVHVDAAYAGSACICP---EFQH--FIDGVEGADSF-SLNAHKWFFT-TLDCCCLW--V 330 (506)
Q Consensus 263 G~i---dpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~---~~~~--~~~gi~~aDsi-~~~~hK~l~~-p~~~g~~~--~ 330 (506)
|.+ +.+++|+++|++||+|+++|.+|..... .+ .... .+... .-..| ..++.|.+++ .+.+|+++ .
T Consensus 208 G~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~-~~~~~~~~~~~~~~~~-~~~vI~~~SfSK~~~~~G~RvG~~v~~~ 285 (423)
T PLN02397 208 GVDPTPEQWEQISDLIKSKNHLPFFDSAYQGFAS-GDLDADAQSVRMFVED-GHEILVAQSYAKNMGLYGERVGALSVVC 285 (423)
T ss_pred CCCCCHHHHHHHHHHHHhCCcEEEEecccCCccC-CchhhhhHHHHHHHhc-CCcEEEEEECcccCCCccccceEEEEEe
Confidence 999 4577889999999999999999977643 11 0111 11111 11244 4468999985 57789875 3
Q ss_pred eCchhHH---hhhcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhch--------hHHHHHHHHHHHHH
Q 048643 331 KDPSALV---SSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGV--------ANLRHFLRSHVNMA 399 (506)
Q Consensus 331 r~~~~l~---~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~--------~g~~~~i~~~~~~a 399 (506)
.++..+. +.+.....+.. .+. ..+..+++...+.. +.++++.++..+..
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~-----------------~~~---~~~~q~~~~~~L~~~~~~~~~~~~~~~~~~~~~~rr 345 (423)
T PLN02397 286 KSADVAVRVKSQLKLIARPMY-----------------SNP---PIHGASIVATILGDPELFSEWTKELKGMADRIISMR 345 (423)
T ss_pred CCHHHHHHHHHHHHHHHhccc-----------------CCC---cHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333221 11111000000 000 11222333332321 12567778888999
Q ss_pred HHHHHHHHcCC---CCc---c--ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEE
Q 048643 400 KLFERLVASDK---RVS---P--SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMR 471 (506)
Q Consensus 400 ~~l~~~l~~~~---~~~---p--~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR 471 (506)
+.+.+.|+++. +|+ | +.+.|- +- ..++.++|.++..+++.+ ++ |
T Consensus 346 ~~l~~~L~~~~~~~~~~~~~p~gg~fl~~--~l-------------------~~~~~~~Ll~~~~V~v~~---~~----R 397 (423)
T PLN02397 346 QKLYDALEARGSPGDWSHITKQIGMFSFT--GL-------------------NKEQVDRMTKEYHIYMTR---DG----R 397 (423)
T ss_pred HHHHHHHHhcCCCCCCCcccCCceEEEec--CC-------------------CHHHHHHHHHhCCEEECC---CC----e
Confidence 99999999872 155 4 333332 11 022445554444444432 22 9
Q ss_pred EEecCCCCCHHHHHHHHHHHHHHHH
Q 048643 472 FAVGATLTEERHVMVAWTMVQEQLE 496 (506)
Q Consensus 472 ~~~~~~~tt~edi~~li~~l~~~~~ 496 (506)
+++++ .++++|+.+++.|+++.+
T Consensus 398 i~~~~--~~~~~i~~~~~~i~~~~~ 420 (423)
T PLN02397 398 ISMAG--LSSKNVPYLADAIHAVVT 420 (423)
T ss_pred EEEee--CCHHHHHHHHHHHHHHHh
Confidence 99854 577799999999998853
No 292
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.52 E-value=8.1e-12 Score=126.03 Aligned_cols=273 Identities=12% Similarity=0.079 Sum_probs=173.4
Q ss_pred hhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHH
Q 048643 128 PAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKA 207 (506)
Q Consensus 128 p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka 207 (506)
+...++.+.+.+|+.+.. .+++ ..++|+|+++++..++.+. + .|++...++..+..+
T Consensus 56 ~~~~~Lr~aia~~~~~~~-~~~~-------~i~it~Ga~~~i~~~~~~~-d--------------~v~v~~P~y~~~~~~ 112 (335)
T PRK14808 56 SPDEELIEKILSYLDTDF-LSKN-------NVSVGNGADEIIYVMMLMF-D--------------RSVFFPPTYSCYRIF 112 (335)
T ss_pred CChHHHHHHHHHHhCCCC-CCcc-------eEEEcCCHHHHHHHHHHHh-C--------------cEEECCCCHHHHHHH
Confidence 456677777777765542 5444 7889999988887666533 1 266778999999999
Q ss_pred HHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecc
Q 048643 208 AQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAA 287 (506)
Q Consensus 208 ~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA 287 (506)
++.+|. +++.+|.+. ++.++... +. ...+|+.+.++|+||.+-+.+++.+++ ++++|+++|.+
T Consensus 113 ~~~~g~---~~~~v~~~~--~~~~~~~~----~~-------~~~~i~i~nP~NPTG~~~s~~~l~~l~-~~~~~ii~DE~ 175 (335)
T PRK14808 113 AKAVGA---KFLEVPLTK--DLRIPEVN----VG-------EGDVVFIPNPNNPTGHVFEREEIERIL-KTGAFVALDEA 175 (335)
T ss_pred HHHcCC---eEEEecCCC--cCCCChhH----cc-------CCCEEEEeCCCCCCCCCcCHHHHHHHH-hcCCEEEEECc
Confidence 999999 999999875 35555332 11 124788899999999999999999998 58999999999
Q ss_pred cccccccCccchhhhcCCCCCCeeEEcCccccC-CCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCcccc
Q 048643 288 YAGSACICPEFQHFIDGVEGADSFSLNAHKWFF-TTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQIT 366 (506)
Q Consensus 288 ~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~ 366 (506)
|.-+. .......+...+. -.++.++.|.++ ...-+|+++... +. .+.+....... +
T Consensus 176 Y~~f~--~~~~~~~~~~~~~-vi~~~S~SK~~~l~GlRvG~~v~~~-~~-~~~l~~~~~~~----------------~-- 232 (335)
T PRK14808 176 YYEFH--GESYVDLLKKYEN-LAVIRTFSKAFSLAAQRIGYVVSSE-KF-IDAYNRVRLPF----------------N-- 232 (335)
T ss_pred hhhhc--CCchHHHHHhCCC-EEEEEechhhccCcccceEEEEeCH-HH-HHHHHHhcCCC----------------C--
Confidence 97642 1111122221111 134566899998 457788888653 33 23332111000 0
Q ss_pred CCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c--ceEEEeecCCCcccccccccchHHHHH
Q 048643 367 LSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS---P--SAVMDKLKPKYENCHSQQLVTEEEAIN 441 (506)
Q Consensus 367 ~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p--~~v~f~~~~~~~~~~~~~~~~~~~~~~ 441 (506)
.+. .....+..++. ..+.+.+..+...+..+++.+.|++. +++ | +.+.+++... +
T Consensus 233 ~~~-~~q~a~~~~l~--~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~~~~g~f~~~~l~~~----------------~ 292 (335)
T PRK14808 233 VSY-VSQMFAKVALD--HREIFEERTKFIVEERERMKSALREM-GYRITDSRGNFVFIFMEKE----------------E 292 (335)
T ss_pred CCH-HHHHHHHHHHh--CHHHHHHHHHHHHHHHHHHHHHHHHC-CCEECCCCCeEEEEeCCCc----------------c
Confidence 000 01111222332 12345666667777788888999887 676 4 5555554321 1
Q ss_pred HHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHH
Q 048643 442 EFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQ 494 (506)
Q Consensus 442 ~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~ 494 (506)
..++.+++.+.|+.. ... ..++|+++. +.++.++++++|++.
T Consensus 293 --~~~~~~~l~~~Gi~V-~~~----~~~~Risi~----~~~~~~~~~~~l~~~ 334 (335)
T PRK14808 293 --KERLLEHLRAKNIAV-RSF----REGVRITIG----KREENDMILKELEVF 334 (335)
T ss_pred --HHHHHHHHHHCCeEE-EEC----CCCeEEecC----CHHHHHHHHHHHHhh
Confidence 245677788888744 332 247999985 456899999988753
No 293
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=99.52 E-value=7.4e-13 Score=130.88 Aligned_cols=310 Identities=15% Similarity=0.122 Sum_probs=196.0
Q ss_pred hhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCch-HHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHH
Q 048643 129 AATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTC-EAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKA 207 (506)
Q Consensus 129 ~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt-~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka 207 (506)
....+...++..+-+..|++... ..++++.+| |+....|.+.|.+ + ....|+.+...|+|-.|+
T Consensus 53 ~~~~ltn~l~~d~~~~~G~~~~~------~~~~vP~atgm~l~l~l~~l~~r--~-------~a~~Viw~ridqkSc~ka 117 (389)
T PF05889_consen 53 LLAKLTNSLVLDALRLAGLRSVK------SCFVVPMATGMSLTLCLLALRMR--P-------KAKYVIWPRIDQKSCFKA 117 (389)
T ss_dssp HHHHHHHHHHHHHHHHTTHTTHC------EEEEESS-HHHHHHHHHHHHHHH--C-------T--EEEEEEEETHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCcccc------ceEEEecccccHHHHHHHHHhcc--c-------CCceEEEeeccccchHHH
Confidence 34556666666667778998642 567776655 5555666666622 1 234567788999999999
Q ss_pred HHHhCCCCCCeEEEecCC-CCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc-cChhHHHHHHHHhCCEEEee
Q 048643 208 AQIVGIDLKNFRAIKTTK-SSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV-DPLKPLCDVAKQFGIWVHVD 285 (506)
Q Consensus 208 ~~~~G~g~~~v~~v~~~~-~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i-dpl~~I~~ia~~~g~~lhVD 285 (506)
+...|+ +++.||... .+....|.+.+|+++++. |..+.+++.|..+-..|.. |++++|+++|++||++++|.
T Consensus 118 i~~AGl---~~~vV~~~~~~d~l~td~~~ie~~i~~~---G~~~iLcvltttscfapr~~D~i~~IakiC~~~~IPhlvN 191 (389)
T PF05889_consen 118 IERAGL---EPVVVENVLEGDELITDLEAIEAKIEEL---GADNILCVLTTTSCFAPRLPDDIEEIAKICKEYDIPHLVN 191 (389)
T ss_dssp HHHTT----EEEEE-EEEETTEEEEHHHHHHHHHHHH---CGGGEEEEEEESSTTTTB----HHHHHHHHHHHT--EEEE
T ss_pred HHhcCC---eEEEeeccCCCCeeeccHHHHHHHHHHh---CCCCeEEEEEecCccCCCCCccHHHHHHHHHHcCCceEEc
Confidence 999999 999999632 223577889999999653 4557788888877778877 55999999999999999999
Q ss_pred cccccccccC-ccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCcc
Q 048643 286 AAYAGSACIC-PEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQ 364 (506)
Q Consensus 286 aA~gg~~~~~-~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~ 364 (506)
+|||.-.-.+ ....... ...+.|.+.-+.-|-|.+|.|.+.+...++..+. ..+ ..|-.
T Consensus 192 nAYgvQ~~~~~~~i~~a~-~~GRvda~vqS~dkNF~VPvGgai~As~~~~~i~-~vs--~~YpG---------------- 251 (389)
T PF05889_consen 192 NAYGVQSSKCMHLIQQAW-RVGRVDAFVQSTDKNFMVPVGGAIMASFDPSGIL-AVS--KEYPG---------------- 251 (389)
T ss_dssp GTTTTT-HHHHHHHHHHH-HHSTCSEEEEEHHHHHCEESSHEEEEESSHHHHH-HHH--HTSHS----------------
T ss_pred cchhhhHHHHHHHHHHHH-hcCCcceeeeecCCCEEecCCCcEEEecCHHHHH-HHH--HHhhh----------------
Confidence 9997632111 1111101 1248999999999999999999999888766543 221 12221
Q ss_pred ccCCCCC--CchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCC---C---Cc-c-c--eEEEeecCCCccccccc
Q 048643 365 ITLSRRF--RSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDK---R---VS-P-S--AVMDKLKPKYENCHSQQ 432 (506)
Q Consensus 365 ~~~sr~~--~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~---~---~~-p-~--~v~f~~~~~~~~~~~~~ 432 (506)
|-+ ..+.+...|..+|..|+...+....++-.++.++|++.. + .+ | | .+.|....-. ..
T Consensus 252 ----Ras~sp~ld~~itLl~LG~~g~~~ll~~r~~~f~~l~erl~~~aee~~e~ll~~p~N~is~a~tl~~l~--~~--- 322 (389)
T PF05889_consen 252 ----RASASPSLDLFITLLSLGCTGYGALLKERKASFPYLKERLKKWAEEVGERLLETPRNHISMAFTLDTLY--EI--- 322 (389)
T ss_dssp ----HBTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEBSSSTT-SSEEEEE-TTCC--TC---
T ss_pred ----hhhcccchHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCeeEEEECccch--hh---
Confidence 111 236678889999999999999999999999999997531 1 11 5 3 3344332210 00
Q ss_pred ccchHHHHHHHHHHHHHHHHhcCcE---EEeeeeECC--------EEEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 048643 433 LVTEEEAINEFNRELLESINASGKA---YMTHAVCGG--------IYAMRFAVGATLTEERHVMVAWTMVQEQLE 496 (506)
Q Consensus 433 ~~~~~~~~~~~~~~l~~~l~~~g~~---~~~~~~~~g--------~~~lR~~~~~~~tt~edi~~li~~l~~~~~ 496 (506)
. ......|...|..+|+. .+.+..... ..+|-++. ..-.++||||.+++.|+++.+
T Consensus 323 ---~----~k~~~~lgs~Lf~R~VsG~RvV~~~~~~~tsh~~~yp~~Ylt~As-aiG~~~eevd~~v~rL~k~i~ 389 (389)
T PF05889_consen 323 ---S----QKDGTFLGSMLFKRGVSGIRVVTPGGKKQTSHSSNYPCPYLTAAS-AIGMTREEVDYFVKRLDKIIK 389 (389)
T ss_dssp ---C----SSHHHHHHHHHHHTTEESSEEEETSSCEEETTSS--SSSEEEEEE--TT--HHHHHHHHHHHHHHHH
T ss_pred ---c----cchhhhHHHHHHhCCcccceeeccCCCcccccCCCCchHHHHHHH-HhCCCHHHHHHHHHHHHHHhC
Confidence 0 01123455555555542 122111111 25777744 367889999999999998764
No 294
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.51 E-value=1.8e-11 Score=123.48 Aligned_cols=278 Identities=15% Similarity=0.095 Sum_probs=186.2
Q ss_pred HHHHHHHcC-CCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCCCC
Q 048643 138 MDWLGQMLK-LPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGIDLK 216 (506)
Q Consensus 138 ~~~la~l~g-~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~ 216 (506)
.+.+++.+| .+.. ..++..|+++.+-..+.+.+. ++..|+++..++......++..|.
T Consensus 63 ~~a~a~~~~~~~~~-------~V~~gnGsde~i~~l~~~~~~-----------~gd~vl~~~Ptf~~Y~~~a~~~g~--- 121 (356)
T COG0079 63 RAALAEYYGVVDPE-------NVLVGNGSDELIELLVRAFVE-----------PGDTVLIPEPTFSMYEIAAQLAGA--- 121 (356)
T ss_pred HHHHHHHhCCCCcc-------eEEEcCChHHHHHHHHHHhhc-----------CCCEEEEcCCChHHHHHHHHhcCC---
Confidence 355677777 4433 455566666655544444443 556777888899999999999999
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHh--CCEEEeeccccccccc
Q 048643 217 NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQF--GIWVHVDAAYAGSACI 294 (506)
Q Consensus 217 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~--g~~lhVDaA~gg~~~~ 294 (506)
+++.||.++ +.+|++.+.+++.++.+ +|+++.++|+||..-+.++|.++++.. +.+++||+||.-+.-
T Consensus 122 ~~~~v~~~~---~~~d~~~~~~~~~~~~~------lv~i~nPNNPTG~~~~~~~l~~l~~~~~~~~~vVvDEAY~eF~~- 191 (356)
T COG0079 122 EVVKVPLKE---FRLDLDAILAAIRDKTK------LVFLCNPNNPTGTLLPREELRALLEALPEGGLVVIDEAYIEFSP- 191 (356)
T ss_pred eEEEecccc---cccCHHHHHHhhhcCCC------EEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhhcCC-
Confidence 999999873 79999999999987433 899999999999998888888888764 789999999965443
Q ss_pred CccchhhhcCCCCCC--eeEEcCccccC-CCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCccccCCCCC
Q 048643 295 CPEFQHFIDGVEGAD--SFSLNAHKWFF-TTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRF 371 (506)
Q Consensus 295 ~~~~~~~~~gi~~aD--si~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~ 371 (506)
+..-.++. .-+ .+.=++.|.++ ...-+|+ .+.+++.........++|-.
T Consensus 192 -~~~~~l~~---~~~nlivlRTfSKa~gLAGlRlGy-~ia~~~~i~~l~~vr~p~~v----------------------- 243 (356)
T COG0079 192 -ESSLELLK---YPPNLIVLRTFSKAFGLAGLRVGY-AIANPELIAALNKVRPPFNV----------------------- 243 (356)
T ss_pred -chhhhhcc---CCCCEEEEEecHHhhhcchhceee-ccCCHHHHHHHHHhcCCCCC-----------------------
Confidence 11111111 122 34456779765 4466887 44555544332233333311
Q ss_pred CchHHHHHHHHhc-hhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c---ceEEEeecCCCcccccccccchHHHHHHHH
Q 048643 372 RSLKLWLVIRNYG-VANLRHFLRSHVNMAKLFERLVASDKRVS---P---SAVMDKLKPKYENCHSQQLVTEEEAINEFN 444 (506)
Q Consensus 372 ~al~~~~~l~~~G-~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p---~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (506)
..+...++...+- .+-+++.+++..+-+.++.+.|++++ +. | |.+.++.... . .
T Consensus 244 ~~~a~~aa~aal~~~~~~~~~~~~~~~~r~rl~~~l~~~~-~~~v~pS~aNFvlv~~~~~-----------------~-~ 304 (356)
T COG0079 244 SSPALAAAIAALRDADYLEESVERIREERERLYAALKALG-LFGVFPSQANFVLVRVPDA-----------------E-A 304 (356)
T ss_pred CHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHhCC-CCeecCCCCcEEEEECCCc-----------------c-H
Confidence 1233334444332 25678888888999999999999986 43 5 6677766431 2 3
Q ss_pred HHHHHHHHhcCcEEEeeee-ECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 048643 445 RELLESINASGKAYMTHAV-CGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEA 497 (506)
Q Consensus 445 ~~l~~~l~~~g~~~~~~~~-~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~ 497 (506)
..+.+.|.++|++.-.... .....++|+++. ++++-++++++|.++...
T Consensus 305 ~~l~~~L~~~giivR~~~~~~~~~~~lRitvg----t~een~~ll~AL~~~~~~ 354 (356)
T COG0079 305 AALAEALLKKGILVRDCSSVGLLPGYLRITVG----TPEENDRLLAALREVLKG 354 (356)
T ss_pred HHHHHHHHHCCEEEEeCCCCCCCCCeEEEEeC----CHHHHHHHHHHHHHHHhc
Confidence 4677777788875433323 223569999995 566779999999987653
No 295
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.48 E-value=2.5e-11 Score=122.24 Aligned_cols=262 Identities=12% Similarity=0.040 Sum_probs=165.0
Q ss_pred HHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCCCC
Q 048643 137 VMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGIDLK 216 (506)
Q Consensus 137 ~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~ 216 (506)
+.+.+++.+|.+ ..++|+|+++++...+.+ . ++..|++...++..+...++.+|+
T Consensus 54 Lr~~ia~~~~~~---------~I~it~Gs~~al~~~~~~--~-----------~gd~v~v~~P~y~~~~~~~~~~g~--- 108 (330)
T PRK05664 54 LEAAARAYYGAP---------QLLPVAGSQAAIQALPRL--R-----------APGRVGVLSPCYAEHAHAWRRAGH--- 108 (330)
T ss_pred HHHHHHHHhCCC---------CEEECcCHHHHHHHHHHc--c-----------CCCEEEEcCCChHHHHHHHHHcCC---
Confidence 345667766642 678899988877544211 1 556788899999999999999999
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC---hhHHHHHHHHhCCEEEeecccccccc
Q 048643 217 NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSAC 293 (506)
Q Consensus 217 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp---l~~I~~ia~~~g~~lhVDaA~gg~~~ 293 (506)
+++.||.+ .++++++ . +-+++.+.++|+||.+-+ +++|+++|+++|+|+++|.+|..+.
T Consensus 109 ~~~~v~~~----------~~~~~~~-~------~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~~- 170 (330)
T PRK05664 109 QVRELDEA----------EVEAALD-S------LDVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFMDNT- 170 (330)
T ss_pred eEEEechh----------hHhhhhc-C------CCEEEEeCCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCcccCC-
Confidence 99988863 3444443 1 125777889999999965 6667777889999999999996432
Q ss_pred cCccchhhhcCCCCCC--eeEEcCccccC-CCCcceEEEEeCchhHHhhhcC-CccccCCccccCCCccCCCCccccCCC
Q 048643 294 ICPEFQHFIDGVEGAD--SFSLNAHKWFF-TTLDCCCLWVKDPSALVSSLST-NPEYLKNKATESKQVVDYKDWQITLSR 369 (506)
Q Consensus 294 ~~~~~~~~~~gi~~aD--si~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~sr 369 (506)
..+... .+..-| .+..++.|.++ ..+-+|+++.. +... +.+.. ...+. .
T Consensus 171 ~~~s~~----~~~~~~~vi~~~SfSK~~gl~GlRiG~~v~~-~~l~-~~~~~~~~~~~-------------------~-- 223 (330)
T PRK05664 171 PQHSLA----ACAHRPGLIVLRSFGKFFGLAGARLGFVLAE-PALL-RALAELLGPWT-------------------V-- 223 (330)
T ss_pred Cccccc----ccccCCCEEEEeeccccccCCCcceEEEEeC-HHHH-HHHHHhcCCCC-------------------C--
Confidence 111111 111112 35666899998 55778888764 3332 23321 11110 0
Q ss_pred CCCchHHHHHHHHhc-hhHHHHHHHHHHHHHHHHHHHHHcCCCCcc--c---eEEEeecCCCcccccccccchHHHHHHH
Q 048643 370 RFRSLKLWLVIRNYG-VANLRHFLRSHVNMAKLFERLVASDKRVSP--S---AVMDKLKPKYENCHSQQLVTEEEAINEF 443 (506)
Q Consensus 370 ~~~al~~~~~l~~~G-~~g~~~~i~~~~~~a~~l~~~l~~~~~~~p--~---~v~f~~~~~~~~~~~~~~~~~~~~~~~~ 443 (506)
..+..+++...+. .+..+++.++..+..+++.+.|++. +++| + .+.++. +.
T Consensus 224 --~~~~~~~~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~~~~~~f~~~~~-~~------------------- 280 (330)
T PRK05664 224 --SGPTRWLAQAALADTPWQRRQRERLLAASQRLAALLRRH-GLTPAGGCALFQWVRT-ED------------------- 280 (330)
T ss_pred --CHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHC-CCcccCCcceEEEEec-CC-------------------
Confidence 1122223333332 2334566677777888999999887 6663 2 233332 11
Q ss_pred HHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 048643 444 NRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEA 497 (506)
Q Consensus 444 ~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~ 497 (506)
..++.+.+.+.|+... . +....++|+++.. +.++.++++++|+++.++
T Consensus 281 ~~~~~~~l~~~gi~v~-~--f~~~~~iRis~~~---~~~~~~~l~~al~~~~~~ 328 (330)
T PRK05664 281 AAALHEFLARRGILTR-L--FEQPASLRFGLPA---DEADWARLDQALLAYRKE 328 (330)
T ss_pred HHHHHHHHHHCCeEEE-E--CCCCCeEEEECCC---CHHHHHHHHHHHHHHHhh
Confidence 2456677777787543 2 2234689999853 566899999999887654
No 296
>PRK08354 putative aminotransferase; Provisional
Probab=99.48 E-value=1.7e-11 Score=122.43 Aligned_cols=148 Identities=14% Similarity=0.011 Sum_probs=105.2
Q ss_pred HHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCCCC
Q 048643 137 VMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGIDLK 216 (506)
Q Consensus 137 ~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~ 216 (506)
+.+++++.+|. ..++|+|+++++...+... . ++..|++...+++.+.++++.+|.
T Consensus 45 l~~~ia~~~~~----------~I~vt~G~~~al~~~~~~~-~-----------~gd~vlv~~P~y~~~~~~~~~~g~--- 99 (311)
T PRK08354 45 LEEEFSKLFGE----------PIVITAGITEALYLIGILA-L-----------RDRKVIIPRHTYGEYERVARFFAA--- 99 (311)
T ss_pred HHHHHHHHHCC----------CEEECCCHHHHHHHHHHhh-C-----------CCCeEEEeCCCcHHHHHHHHHcCC---
Confidence 45677887772 5789999998876443221 1 455788889999999999999999
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC---hhHHHHHHHHhCCEEEeecccccccc
Q 048643 217 NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSAC 293 (506)
Q Consensus 217 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp---l~~I~~ia~~~g~~lhVDaA~gg~~~ 293 (506)
+++.++ +|++.|++++++ +.+++.+.++|+||.+-+ +++|+++|+++|+|+++|.+|+.+..
T Consensus 100 ~~~~~~--------~d~~~l~~~~~~-------~~~vi~~~P~NPTG~~~~~~~l~~l~~~a~~~~~~li~De~y~~f~~ 164 (311)
T PRK08354 100 RIIKGP--------NDPEKLEELVER-------NSVVFFCNPNNPDGKFYNFKELKPLLDAVEDRNALLILDEAFIDFVK 164 (311)
T ss_pred EEeecC--------CCHHHHHHhhcC-------CCEEEEecCCCCCCCccCHHHHHHHHHHhhhcCcEEEEeCcchhccc
Confidence 776543 578888887652 125788899999999965 67778888999999999999976543
Q ss_pred cCccchhhhcCCCCCCeeEEcCccccCCC-CcceEEEE
Q 048643 294 ICPEFQHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWV 330 (506)
Q Consensus 294 ~~~~~~~~~~gi~~aDsi~~~~hK~l~~p-~~~g~~~~ 330 (506)
- .. . .. ..--.+..++.|.++.| ..+|+++.
T Consensus 165 ~-~~--~-~~--~~~vi~~~S~SK~~~l~GlRiG~~v~ 196 (311)
T PRK08354 165 K-PE--S-PE--GENIIKLRTFTKSYGLPGIRVGYVKG 196 (311)
T ss_pred c-cc--c-cC--CCcEEEEeccHhhcCCccceeeeeee
Confidence 1 11 0 00 01123445678999844 66888776
No 297
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.47 E-value=7.4e-11 Score=123.39 Aligned_cols=308 Identities=10% Similarity=0.032 Sum_probs=182.5
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHH
Q 048643 131 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQI 210 (506)
Q Consensus 131 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~ 210 (506)
.....++.+.|++++.-..+ ..+|+++||+||..|+..||...-++ + +..+|......|=...-+...
T Consensus 123 ~~~~~~lae~L~~~~p~~~~-------~v~f~~SGsEAve~AlklAr~~t~~~----g-r~~ii~~~~~yHG~t~~~ls~ 190 (459)
T PRK11522 123 DPLRAMLAKTLAALTPGKLK-------YSFFCNSGTESVEAALKLAKAYQSPR----G-KFTFIATSGAFHGKSLGALSA 190 (459)
T ss_pred CHHHHHHHHHHHHhCCCCCC-------EEEEeCCchHHHHHHHHHHHHHhccC----C-CcEEEEecCCCCCCcHHHhhh
Confidence 34455566777777532211 57899999999999999999763111 1 123444444455433333333
Q ss_pred hCCCC---------CCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC----hhHHHHHHHH
Q 048643 211 VGIDL---------KNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP----LKPLCDVAKQ 277 (506)
Q Consensus 211 ~G~g~---------~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp----l~~I~~ia~~ 277 (506)
.|-.. ..+..+|. -|.++|++++++..+.+..+.+|++.-.....|.+-| ++++.++|++
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~~~~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~ 263 (459)
T PRK11522 191 TAKSTFRKPFMPLLPGFRHVPF-------GNIEAMRTALSECKKTGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDE 263 (459)
T ss_pred cCCcccccCCCCCCCCCcccCC-------CCHHHHHHHHHHhhccCCcEEEEEEecccCCCCCccCCHHHHHHHHHHHHH
Confidence 33210 11222332 2678899988764333445566777766667788877 9999999999
Q ss_pred hCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCC-CcceEEEEeCchhHHhhhcCCccccCCccccCCC
Q 048643 278 FGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQ 356 (506)
Q Consensus 278 ~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~ 356 (506)
||+.+++|.++.|+.....-+.....|+ ..|.+++ -|.++.. +++|.+++++. .. ..+... ++....
T Consensus 264 ~g~llI~DEV~tG~GRtG~~~a~e~~gv-~PDivt~--gK~lggG~~Pigav~~~~~-i~-~~~~~~-~~~~~~------ 331 (459)
T PRK11522 264 FGALLILDEVQTGMGRTGKMFACEHENV-QPDILCL--AKALGGGVMPIGATIATEE-VF-SVLFDN-PFLHTT------ 331 (459)
T ss_pred cCCEEEeccceecCCccchhhhhhccCC-CCCEEEe--chhhhCCCccceeEEEcHH-HH-HHhccC-CcccCC------
Confidence 9999999999976432221111112244 4687765 5888765 36788887643 22 233211 111110
Q ss_pred ccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcC----CCC-c----c-ceEEEeecCCCc
Q 048643 357 VVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASD----KRV-S----P-SAVMDKLKPKYE 426 (506)
Q Consensus 357 ~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~----~~~-~----p-~~v~f~~~~~~~ 426 (506)
|+ .+.+.......++|+.+-.+ ++.++..++.++|.+.|+++ |.+ . . .++.+.+...
T Consensus 332 -------T~-~gnp~~~Aaala~L~~i~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~VrG~Gl~~giel~~~-- 398 (459)
T PRK11522 332 -------TF-GGNPLACAAALATINVLLEQ---NLPAQAEQKGDYLLDGFRQLAREYPDLVQEARGKGMLMAIEFVDN-- 398 (459)
T ss_pred -------CC-CCCHHHHHHHHHHHHHHhcc---hHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEeceeEEEEEecCc--
Confidence 11 11122223445556665444 35677777888888888654 311 1 1 3444444321
Q ss_pred ccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHc
Q 048643 427 NCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAFLT 500 (506)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l~~ 500 (506)
+....+.+.+.++|.+ +.+.. .+..++|++. ....+++||++++++|+++.+++.+
T Consensus 399 ---------------~~~~~i~~~l~~~Gvl-~~~~~-~~~~~lr~~P-pl~~t~~~id~~l~~l~~~l~~~~~ 454 (459)
T PRK11522 399 ---------------EIGYNFASEMFRQRVL-VAGTL-NNAKTIRIEP-PLTLTIEQCEQVLKAARKALAAMRV 454 (459)
T ss_pred ---------------hHHHHHHHHHHHCCeE-EEecC-CCCCEEEEEC-CccCCHHHHHHHHHHHHHHHHHHHH
Confidence 2345677788888864 44332 2446899988 4667888999999999998877654
No 298
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.46 E-value=5.1e-11 Score=120.40 Aligned_cols=272 Identities=13% Similarity=0.056 Sum_probs=169.6
Q ss_pred HHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCC
Q 048643 135 NIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGID 214 (506)
Q Consensus 135 ~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g 214 (506)
..+.+++++.+|.+.. ...++|+|+++++. .+..+.. ++. |++...++.....+++..|.
T Consensus 56 ~~L~~~ia~~~~~~~~------~~I~i~~Gs~e~i~-~l~~~~~-----------~g~-v~v~~P~y~~y~~~~~~~g~- 115 (339)
T PRK06959 56 DGLAACAARYYGAPDA------AHVLPVAGSQAAIR-ALPALLP-----------RGR-VGIAPLAYSEYAPAFARHGH- 115 (339)
T ss_pred HHHHHHHHHHhCCCCc------ccEEECcCHHHHHH-HHHHhcC-----------CCe-EEEcCCCcHHHHHHHHHCCC-
Confidence 4566889999999742 16788888887764 3322211 333 55677899999999999999
Q ss_pred CCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHH---HHHHhCCEEEeecccccc
Q 048643 215 LKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCD---VAKQFGIWVHVDAAYAGS 291 (506)
Q Consensus 215 ~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~---ia~~~g~~lhVDaA~gg~ 291 (506)
+++.+|.+. +.+.+ .. .+++.+.++|+||.+-+.+++.+ .|++++.|+++|.+|..+
T Consensus 116 --~~~~v~~~~--------~~~~~----~~------~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~~ 175 (339)
T PRK06959 116 --RVVPLDEAA--------DTLPA----AL------THLIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFADT 175 (339)
T ss_pred --EEEeecccc--------hhccc----cC------CEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCccC
Confidence 888887652 12211 11 16788889999999966555554 466789999999999764
Q ss_pred cccCccchhhhcCCCCCCeeEEcCccccC-CCCcceEEEEeCchhHHhhhcC-CccccCCccccCCCccCCCCccccCCC
Q 048643 292 ACICPEFQHFIDGVEGADSFSLNAHKWFF-TTLDCCCLWVKDPSALVSSLST-NPEYLKNKATESKQVVDYKDWQITLSR 369 (506)
Q Consensus 292 ~~~~~~~~~~~~gi~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~sr 369 (506)
.. .+....... -.+ -.+..++.|.++ ...-+|+++.. ++.. +.+.. ..++ .
T Consensus 176 ~~-~~s~~~~~~-~~~-vi~l~SfSK~~gl~GlRiGy~v~~-~~li-~~l~~~~~~~-----------------~----- 228 (339)
T PRK06959 176 LP-AASLAAHTD-RPG-LVVLRSVGKFFGLAGVRAGFVLAA-PALL-AALRDALGAW-----------------T----- 228 (339)
T ss_pred CC-cccchhccC-CCC-EEEEecChhhcCCcchheEEEecC-HHHH-HHHHHhcCCC-----------------C-----
Confidence 31 122211111 011 145567899998 45778888764 3332 33321 1111 0
Q ss_pred CCCchHHHHHHHHhch-hHHHHHHHHHHHHHHHHHHHHHcCCCCc--c-c-eEEEeecCCCcccccccccchHHHHHHHH
Q 048643 370 RFRSLKLWLVIRNYGV-ANLRHFLRSHVNMAKLFERLVASDKRVS--P-S-AVMDKLKPKYENCHSQQLVTEEEAINEFN 444 (506)
Q Consensus 370 ~~~al~~~~~l~~~G~-~g~~~~i~~~~~~a~~l~~~l~~~~~~~--p-~-~v~f~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (506)
...+...++...+.. +..++..++..+..+++.+.|++. +++ + + .+.++. +. .
T Consensus 229 -vs~~~q~a~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~~~~~f~~~~~-~~-------------------~ 286 (339)
T PRK06959 229 -VSGPARHAVRAAFADAAWQAAMRERLAADGARLAALLRAH-GFAVHATPLFSWTDD-PR-------------------A 286 (339)
T ss_pred -CcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CCCccCcceEEEEeC-CC-------------------H
Confidence 012223333333322 345566677777889999999987 676 3 3 333332 11 2
Q ss_pred HHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHcc
Q 048643 445 RELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAFLTT 501 (506)
Q Consensus 445 ~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l~~~ 501 (506)
.++.+.|.++|+. +... ....++|+++.. +.++.++++++|+++.+.+...
T Consensus 287 ~~l~~~l~~~GI~-vr~~--~~~~~lRisi~~---~~~e~~~l~~al~~~~~~~~~~ 337 (339)
T PRK06959 287 AALHAALARRGIW-TRYF--APPPSVRFGLPA---DEAEWQRLEDALAECVPTLAAA 337 (339)
T ss_pred HHHHHHHHhCCeE-EEEC--CCCCeEEEECCC---CHHHHHHHHHHHHHHHHHHhhc
Confidence 4577778888874 4322 334589999832 5669999999999988877654
No 299
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.46 E-value=4.5e-11 Score=122.62 Aligned_cols=291 Identities=13% Similarity=0.086 Sum_probs=165.1
Q ss_pred hHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHH
Q 048643 130 ATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQ 209 (506)
Q Consensus 130 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~ 209 (506)
...++.++.++++. .+.. -.+++++||+||..|+..+|... + ++.+|......|-+...++.
T Consensus 68 ~~~~~~~la~~l~~---~~~~-------~~~~~~SGseA~~~Al~~ar~~~----~----~~~vv~~~~~yHg~~~~~~~ 129 (375)
T PRK04260 68 LNSLQEEVAQKLIG---DKDY-------LAFFCNSGAEANEAAIKIARKAT----G----KQEIITFQNSFHGRTFGSMS 129 (375)
T ss_pred CCHHHHHHHHHHhc---CcCC-------EEEEcCccHHHHHHHHHHHHHhc----C----CCeEEEECCCcCcccHHHHh
Confidence 35566665555543 1221 46899999999999999998641 0 33456666778887777765
Q ss_pred HhCCCCC------CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC----hhHHHHHHHHhC
Q 048643 210 IVGIDLK------NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP----LKPLCDVAKQFG 279 (506)
Q Consensus 210 ~~G~g~~------~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp----l~~I~~ia~~~g 279 (506)
..|.... .+..++.. . ..|+++|++.+.+. ..+|++....+++|.+-+ +++|.++|+++|
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~---~-~~dl~~l~~~l~~~------~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~ 199 (375)
T PRK04260 130 ATGQDKIKDGFGDGVPHFSYA---I-FNDLNSVKALVNKN------TAAVMLELVQGESGVLPADKDFVKALADYCQETG 199 (375)
T ss_pred ccCCcccCCCCCCCCCCeEEe---C-CCCHHHHHHhcCCC------eEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcC
Confidence 5443100 01111110 0 24889999887532 346777777777888744 899999999999
Q ss_pred CEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccC
Q 048643 280 IWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVD 359 (506)
Q Consensus 280 ~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 359 (506)
+++++|++|.+...-...+.....++ .-|.+ ...|.++..+..|+++.++. +...+... .+..
T Consensus 200 ~~~i~De~~~g~g~~g~~~~~~~~~~-~pdi~--t~sK~l~~G~~ig~~~~~~~--~~~~~~~~-~~~~----------- 262 (375)
T PRK04260 200 ILLIVDEVQTGMGRTGKLYAFEHYGI-EPDIF--TLAKGLANGVPVGAMLAKSS--LGGAFGYG-SHGS----------- 262 (375)
T ss_pred CEEEEechhhCCCcccchhhhHhhCC-CCCEE--EecccccCCcceEEEEEcHH--HHhhcCCC-CCCC-----------
Confidence 99999999976422111111111233 35644 46898886567888888743 22233210 0000
Q ss_pred CCCccccCCCCCCchHHHHHHHHhchhH-HHHHHHHHHHHHHHHHHHHHcCCCCc--c---ceEEEeecCCCcccccccc
Q 048643 360 YKDWQITLSRRFRSLKLWLVIRNYGVAN-LRHFLRSHVNMAKLFERLVASDKRVS--P---SAVMDKLKPKYENCHSQQL 433 (506)
Q Consensus 360 ~~~~~~~~sr~~~al~~~~~l~~~G~~g-~~~~i~~~~~~a~~l~~~l~~~~~~~--p---~~v~f~~~~~~~~~~~~~~ 433 (506)
+. .+.+.....+..+++.+..+. .++..+....+.+.+.+.+.+.+.+. + ..+.+.+...
T Consensus 263 ----t~-~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~--------- 328 (375)
T PRK04260 263 ----TF-GGNKLSMAAASATLDIMLTAGFLEQALENGNYLQEQLQKALQDKETVTTVRGLGYMIGIETTAD--------- 328 (375)
T ss_pred ----CC-CcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEeccceEEEEEecCc---------
Confidence 11 111122233444454443333 23333333334444444444443332 2 3344443211
Q ss_pred cchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHH
Q 048643 434 VTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQ 494 (506)
Q Consensus 434 ~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~ 494 (506)
..++.+++.+.|+.+ .+. +...+|+++. ...+++||+++++.|+++
T Consensus 329 ----------~~~~~~~l~~~Gi~v-~~~---~~~~lR~~~~-~~~t~~~i~~~l~~l~~~ 374 (375)
T PRK04260 329 ----------LSQLVEAARDKGLIV-LTA---GTNVIRLLPP-LTLTKEEIEQGIAILSEV 374 (375)
T ss_pred ----------HHHHHHHHHhCCCEE-ecC---CCCEEEEcCC-CccCHHHHHHHHHHHHHh
Confidence 246777888889854 322 3467999984 556688999999999765
No 300
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.45 E-value=6.1e-11 Score=122.80 Aligned_cols=304 Identities=13% Similarity=0.040 Sum_probs=173.6
Q ss_pred ccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCch
Q 048643 123 NWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHC 202 (506)
Q Consensus 123 ~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~ 202 (506)
.|...++...+.+.+.+|+.+. +++.+ ..++|+|+++++.. +..... ++..|++...++.
T Consensus 70 ~Y~p~~g~~~lr~aia~~~~~~-~~~~d-------~I~it~Ga~~al~~-l~~l~~-----------~gd~Vlv~~P~y~ 129 (402)
T TIGR03542 70 GYGPEQGYPFLREAIAENDYRG-RIDPE-------EIFISDGAKCDVFR-LQSLFG-----------SDNTVAVQDPVYP 129 (402)
T ss_pred CCCCCCCCHHHHHHHHHHHHhc-CCCHH-------HEEECCCcHHHHHH-HHHhcC-----------CCCEEEEeCCCCc
Confidence 4555567788888888775432 45444 78889988877754 322211 4556888888998
Q ss_pred HHHHHHHHhCC-CC-------CCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC---hhHH
Q 048643 203 ALQKAAQIVGI-DL-------KNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP---LKPL 271 (506)
Q Consensus 203 s~~ka~~~~G~-g~-------~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp---l~~I 271 (506)
.+...++.+|+ |. .+++.||.++++++..|++. . ..+.+|+++.++|+||.+-+ +++|
T Consensus 130 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~---~--------~~~~~i~l~nP~NPTG~~~s~~~~~~l 198 (402)
T TIGR03542 130 AYVDSNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPDLPE---E--------PKIDIIYLCSPNNPTGTVLTKEQLKEL 198 (402)
T ss_pred chHHHHHHcCCccccccccccceEEEeecchhhCCCCCccc---c--------CCceEEEEeCCCCCCCccCCHHHHHHH
Confidence 89999988887 11 16777887643344555321 0 12346777899999999966 8889
Q ss_pred HHHHHHhCCEEEeecccccccccCccchhhhcCCCCC---CeeEEcCccccC-CCCcceEEEEeCchhHHhhh-cCCccc
Q 048643 272 CDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGA---DSFSLNAHKWFF-TTLDCCCLWVKDPSALVSSL-STNPEY 346 (506)
Q Consensus 272 ~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~a---Dsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~-~~~~~y 346 (506)
+++|++||+|+++|.+|..+.. .+.....+..+... -.+..++.|.++ ....+|++++... ...... .....+
T Consensus 199 ~~~a~~~~~~iI~De~y~~~~~-~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~pGlRiG~~i~~~~-l~~~~~~~~~~~~ 276 (402)
T TIGR03542 199 VDYANEHGSLILFDAAYSAFIS-DPSLPHSIFEIPGAKECAIEFRSFSKTAGFTGVRLGWTVVPKE-LTYADGHSVIQDW 276 (402)
T ss_pred HHHHHHcCeEEEEEchhhhhcc-CCCCCcchhhCCCCcccEEEEecCccccCCCCcceEEEEecHH-HhhcchhhHHHHH
Confidence 9999999999999999976432 11111111112121 123567889996 4577888877532 110000 000000
Q ss_pred cCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhc---hhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c---ceE
Q 048643 347 LKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYG---VANLRHFLRSHVNMAKLFERLVASDKRVS---P---SAV 417 (506)
Q Consensus 347 l~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G---~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p---~~v 417 (506)
..... ....+ ...+.-.++...+. ...+.+..+...+..+++.+.|++. +++ | +.+
T Consensus 277 ~~~~~-----------~~~~~---~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~~~~~~f~ 341 (402)
T TIGR03542 277 ERRQC-----------TKFNG---ASYPVQRAAEAAYAGEGLQPILEAISYYMENARILRKALEAA-GFKVYGGEHAPYL 341 (402)
T ss_pred HHHhh-----------hcccC---CCHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHhc-CceecCCCceeEE
Confidence 00000 00000 01121122222221 2335555666677788888888876 565 3 355
Q ss_pred EEeecCCCcccccccccchHHHHHHHHHHHHHHHHh-cCcEEEeeeeE--CCEEEEEEEecCCCCCHHHHHHHHHHHHHH
Q 048643 418 MDKLKPKYENCHSQQLVTEEEAINEFNRELLESINA-SGKAYMTHAVC--GGIYAMRFAVGATLTEERHVMVAWTMVQEQ 494 (506)
Q Consensus 418 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~--~g~~~lR~~~~~~~tt~edi~~li~~l~~~ 494 (506)
.+++.+.- + ..++.+.+.+ .|+....+..+ .+..++|+++.. +++++++.++.|.++
T Consensus 342 ~v~l~~~~---------------~--~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~---~~~~l~~~l~~l~~~ 401 (402)
T TIGR03542 342 WVKTPEGI---------------S--SWDFFDFLLYQYHVVGTPGSGFGPSGEGFVRFSAFG---KRENIVEACERIKEA 401 (402)
T ss_pred EEECCCCC---------------C--HHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC---CHHHHHHHHHHHHhh
Confidence 55553310 0 2346666654 46644433322 235799999743 567888888777653
No 301
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.45 E-value=1.9e-10 Score=119.81 Aligned_cols=312 Identities=11% Similarity=0.051 Sum_probs=172.1
Q ss_pred HHHHHHHHHHHHHcCCCCccccCCCCcEEE-cCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHH
Q 048643 132 ELENIVMDWLGQMLKLPKSFLFSGNGGGVI-QGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQI 210 (506)
Q Consensus 132 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~-t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~ 210 (506)
..+.++.+.|++++..+... ....+| +++||+||..|+..||... + ++.+|.+....|-...-+...
T Consensus 82 ~~~~~lae~l~~~~~~~~~~----~~~~~f~~~sGseA~e~AlklAr~~t-------g-r~~ii~~~~~yHG~t~~~ls~ 149 (425)
T PRK09264 82 TAKREFLETFEETILKPRGL----DYKVQFTGPTGTNAVEAALKLARKVT-------G-RTNIVAFTNGFHGMTLGSLAV 149 (425)
T ss_pred HHHHHHHHHHHHhhcCCcCC----CceEEEeCCCHHHHHHHHHHHHHHhc-------C-CCeEEEECCccCCccHHHHHh
Confidence 44555667777765333211 002345 4799999999999999751 1 223444454556433323322
Q ss_pred hC---------CCCCCeEEEecCCCCCc-ccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc----cChhHHHHHHH
Q 048643 211 VG---------IDLKNFRAIKTTKSSSY-GLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV----DPLKPLCDVAK 276 (506)
Q Consensus 211 ~G---------~g~~~v~~v~~~~~~~~-~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i----dpl~~I~~ia~ 276 (506)
.| .....+..+|....... .-|+++|++.+++.......+.+|++.-.....|.+ +.+++|.++|+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~ 229 (425)
T PRK09264 150 TGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCR 229 (425)
T ss_pred cCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHHHHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHH
Confidence 22 11224566665321000 136788888886532111234566665555555654 46999999999
Q ss_pred HhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCC-CCcceEEEEeCchhHHhhhcCCccccCCccccCC
Q 048643 277 QFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFT-TLDCCCLWVKDPSALVSSLSTNPEYLKNKATESK 355 (506)
Q Consensus 277 ~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~-p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~ 355 (506)
+||+++++|+++.|+......+.....++ ..|.++++ |.++. .+.+|++++++. +. .+.. ....
T Consensus 230 ~~g~llI~DEV~tG~GrtG~~~~~~~~~v-~PDi~t~~--K~l~~~G~pigav~~~~~--i~-~~~~--~~~~------- 294 (425)
T PRK09264 230 KHDILLIVDDIQAGCGRTGTFFSFERAGI-TPDIVTLS--KSISGYGLPMALVLIKPE--LD-VWKP--GEHN------- 294 (425)
T ss_pred HcCcEEEEechhhCCccccHHHHHhhcCC-CCCEEEec--cccCCCccceEEEEEchh--hh-ccCC--CccC-------
Confidence 99999999999987532211111111233 46877764 98876 667899888754 21 2210 0000
Q ss_pred CccCCCCccccCCCCCCchHHHHHH-HHhchhHHHHHHHHHHHHHHHHHHHHHc----CCCC-c--c---ceEEEeecCC
Q 048643 356 QVVDYKDWQITLSRRFRSLKLWLVI-RNYGVANLRHFLRSHVNMAKLFERLVAS----DKRV-S--P---SAVMDKLKPK 424 (506)
Q Consensus 356 ~~~~~~~~~~~~sr~~~al~~~~~l-~~~G~~g~~~~i~~~~~~a~~l~~~l~~----~~~~-~--p---~~v~f~~~~~ 424 (506)
.+.. +.+........++ ..+..+ ++.++..++.++|.+.|++ .|.+ . + .++.+.+.+
T Consensus 295 -------~T~~-gnp~~~aaa~a~l~~~~~~~---~l~~~~~~~g~~l~~~l~~l~~~~~~~~~~vrg~Gl~~~i~l~~- 362 (425)
T PRK09264 295 -------GTFR-GNNLAFVTATAALEEYWSDD---AFEKEVKAKGELVRERLEEIAAKYPGLGAEVRGRGMMQGIDFGD- 362 (425)
T ss_pred -------CCCC-CCHHHHHHHHHHHHHHHhhh---HHHHHHHHHHHHHHHHHHHHHHhCCCceecceecccEEEEEecC-
Confidence 0100 1111112223444 222222 3455566667777776654 3322 1 2 334444432
Q ss_pred CcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHcc
Q 048643 425 YENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAFLTT 501 (506)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l~~~ 501 (506)
.....++.+.+.++|..+ .+.... ...||++. ....++++|+++++.|+++.+++...
T Consensus 363 ----------------~~~~~~l~~~~~~~Gv~~-~~~~~~-~~~lr~~p-~l~~t~~ei~~~~~~l~~~l~~~~~~ 420 (425)
T PRK09264 363 ----------------GELAGKIAAEAFENGLII-ETSGPE-DEVVKLLP-PLTIDEEELEEGLDILEEAVAEVLAE 420 (425)
T ss_pred ----------------hHHHHHHHHHHHHCCCEE-eccCCC-CCEEEEeC-CCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence 233467788888889754 332211 35788876 45677889999999999998877543
No 302
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.45 E-value=3.4e-10 Score=119.64 Aligned_cols=327 Identities=13% Similarity=0.047 Sum_probs=180.0
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHH
Q 048643 131 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQI 210 (506)
Q Consensus 131 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~ 210 (506)
++.+.++.+.|.+++.-..- ...+|+++||+||..|+.+||..... .|..+ ++.+|......|-+..-+..+
T Consensus 132 ~~~~~~lae~L~~~~~~~~~------~~v~f~~SGsEA~e~AlKlAr~~~~~-~g~~~-r~~iI~~~~~yHG~t~~a~sl 203 (504)
T PLN02760 132 TKPSLDLAKELLEMFTARKM------GKVFFTNSGSEANDTQVKLVWYYNNA-LGRPN-KKKFIARSKSYHGSTLISASL 203 (504)
T ss_pred cHHHHHHHHHHHhhcCCCCC------CEEEEeCChHHHHHHHHHHHHHHHHh-cCCCC-CcEEEEECCCccCChHhhhhc
Confidence 34455556677776532111 15688999999999999999865311 11111 345666677788776655554
Q ss_pred hCCC---------CCCeEEEecCCCCCc-----------ccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC---
Q 048643 211 VGID---------LKNFRAIKTTKSSSY-----------GLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP--- 267 (506)
Q Consensus 211 ~G~g---------~~~v~~v~~~~~~~~-----------~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp--- 267 (506)
.|.. ...+..++....-.+ ....++|++.+.+. ....+.+|++.-.....|.+-|
T Consensus 204 sg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~--~~~~iAAvI~EPv~g~gG~~~p~~~ 281 (504)
T PLN02760 204 SGLPALHQKFDLPAPFVLHTDCPHYWRFHLPGETEEEFSTRLADNLENLILKE--GPETIAAFIAEPVMGAGGVIPPPAT 281 (504)
T ss_pred cCChhhccCCCCCCCCcEEeCCCcccccCCCCCcHHHHHHHHHHHHHHHHHhc--CCCceEEEEECCccCCCCCcCCCHH
Confidence 4431 111333332110000 01124566666431 1234556666555556688877
Q ss_pred -hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCC-cceEEEEeCchhHHhhhcCCcc
Q 048643 268 -LKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTL-DCCCLWVKDPSALVSSLSTNPE 345 (506)
Q Consensus 268 -l~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~-~~g~~~~r~~~~l~~~~~~~~~ 345 (506)
+++|.++|++||+++++|.++.|+.....-+.....|+ ..|.+++ -|.++..+ +.|++++++. +.+.+....+
T Consensus 282 yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~~~a~e~~gv-~PDivtl--gK~lggG~~PigAv~~~~~--i~d~~~~~~~ 356 (504)
T PLN02760 282 YFEKIQAVLKKYDILFIADEVICAFGRLGTMFGCDKYNI-KPDLVSL--AKALSSAYMPIGAVLVSPE--ISDVIHSQSN 356 (504)
T ss_pred HHHHHHHHHHHcCCEEEecchhhCCcccchhhHHHhcCC-CCcEEEe--cccccCCccccceEeecHH--HHhhhhcccc
Confidence 99999999999999999999976644433222222345 4887666 58887643 5677777643 2233321110
Q ss_pred ccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc-------c-ceE
Q 048643 346 YLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS-------P-SAV 417 (506)
Q Consensus 346 yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~-------p-~~v 417 (506)
.... . ....|.. +-+.......++|+.+-.+ +++++..++.++|.+.|+++.... - .++
T Consensus 357 ~~~~--------~-~h~~T~~-gnPl~~Aaala~Le~i~~~---~l~~~~~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~ 423 (504)
T PLN02760 357 KLGS--------F-AHGFTYS-GHPVSCAVALEALKIYKER---NIPEHVNKIAPRFQDGIKAFSGSPIIGEIRGTGLIL 423 (504)
T ss_pred cccC--------c-ccCCCCC-CCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHhcCCCeeeEEeCceEE
Confidence 0000 0 0001111 1111223333444444333 457777888888888887652221 1 344
Q ss_pred EEeecCCCcccccccccchH-HHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 048643 418 MDKLKPKYENCHSQQLVTEE-EAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLE 496 (506)
Q Consensus 418 ~f~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~ 496 (506)
.+.+..... ..+. .....+...+.+.+.++|.+... .+ ..+|++. ....|++|||+++++++++.+
T Consensus 424 gie~~~~~~-------~~~~~~~~~~~~~~i~~~~~~~Gvl~~~----~g-~~lrl~P-pl~it~eeid~~~~~l~~al~ 490 (504)
T PLN02760 424 GTEFVDNKS-------PNDPFPAEWGVGAYFGAECKKRGMLVRV----AG-DNIMMSP-PLIITPEEVDELISIYGKALK 490 (504)
T ss_pred EEEEecCCc-------ccccccchhHHHHHHHHHHHhCCcEEEe----cC-CEEEEEC-CCCCCHHHHHHHHHHHHHHHH
Confidence 444432210 0000 00013456778888889975422 12 3588876 355788899999999998877
Q ss_pred HH
Q 048643 497 AF 498 (506)
Q Consensus 497 ~l 498 (506)
++
T Consensus 491 ~~ 492 (504)
T PLN02760 491 AT 492 (504)
T ss_pred HH
Confidence 65
No 303
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.44 E-value=3.8e-12 Score=125.45 Aligned_cols=337 Identities=12% Similarity=0.066 Sum_probs=201.5
Q ss_pred CCCCCccccCCCC-CCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHH
Q 048643 90 WQSPNYFAYFPSS-GSIAGFLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEA 168 (506)
Q Consensus 90 ~~~p~~~~~~~~~-~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a 168 (506)
..+=+|+||-.+. +-.+..+..+-.-.++......+. +...+-+++.+.+|+++|.++. .+|.. |-.+
T Consensus 141 lgSYNYLGFa~~~g~ca~~~~~~~~kygl~~css~~e~--G~~~~hkelE~l~A~f~g~e~a--------~vF~m-Gf~T 209 (519)
T KOG1357|consen 141 LGSYNYLGFAQSVGPCAEASLKSFDKYGLSRCSSRHEA--GTTEEHKELEELVARFLGVEDA--------IVFSM-GFAT 209 (519)
T ss_pred ecccccccccccCCcCChHHHHHHHHhcccccccchhc--ccHHHHHHHHHHHHHhcCCcce--------EEEec-cccc
Confidence 3445777876543 333333332222222222222222 3456666777889999999864 23332 2222
Q ss_pred HHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCC
Q 048643 169 ILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGL 248 (506)
Q Consensus 169 ~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~ 248 (506)
|-+.+-+... ++..|+..+..|.|+.-.|++.|. .++.... -|+++||+.|++....|.
T Consensus 210 Ns~~~p~l~~-----------~gsLIiSDelNHaSi~~GaRLSgA---tiRVfkH-------Ndm~~LEr~Lrd~I~~gq 268 (519)
T KOG1357|consen 210 NSMNIPSLLG-----------KGSLIISDELNHASLITGARLSGA---TTRVFRH-------NDMQGLERLLRDAIVYGQ 268 (519)
T ss_pred cccCcceeec-----------CCcceeeccccchheeccccccCc---eEEEEec-------CCHHHHHHHHHHHHhcCC
Confidence 3222222212 566788888999999999999999 8888874 378899999998876652
Q ss_pred -------ccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecccccccccC-----ccchhhhcCCCCCCeeEEcCc
Q 048643 249 -------VPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIC-----PEFQHFIDGVEGADSFSLNAH 316 (506)
Q Consensus 249 -------~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~~~-----~~~~~~~~gi~~aDsi~~~~h 316 (506)
+-.+|++-.-.+.-|.+++|.++.+++++|.++||.|+||..+++.. .++-. .+-+.+|.+-..+.
T Consensus 269 P~Thrp~kki~iivegiysmEg~iv~Lp~vvalkkkykayl~lDEAHSiGA~g~tGrgvce~~g--~d~~dvDImMGtft 346 (519)
T KOG1357|consen 269 PKTHRPWKKILICVEGIYSMEGTIVDLPEVVALKKKYKAYLYLDEAHSIGAMGATGRGVCEYFG--VDPEDVDIMMGTFT 346 (519)
T ss_pred CCcCCcchheeeeeccceeccCeecccHHHHHhhccccEEEEeeccccccccCCCCcceeeccC--CCchhheeecceeh
Confidence 12455555567789999999999999999999999999998776621 11111 11247888888888
Q ss_pred cccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHh----chhHHHHHH
Q 048643 317 KWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNY----GVANLRHFL 392 (506)
Q Consensus 317 K~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~----G~~g~~~~i 392 (506)
|.+++ +|..+-..+. +.+.+...+++..-. -..+.+ -+-....+++.+ |.++-++.+
T Consensus 347 KSfga---~GGyiagsk~-lid~lrt~s~~~~ya--------------t~~spp-vaqq~~ssl~~i~G~dgt~~g~~k~ 407 (519)
T KOG1357|consen 347 KSFGA---AGGYIAGSKE-LIDYLRTPSPSALYA--------------TSLSPP-VAQQILTSVKHIMGEDGTNRGRQKI 407 (519)
T ss_pred hhccc---ccceecCcHH-HHhhhccCCCceeec--------------ccCChH-HHHHHHHHHHhhcCCCcccHHHHHH
Confidence 88874 3433333333 333333332222111 011111 111223333332 456678899
Q ss_pred HHHHHHHHHHHHHHHcCCCCc------cceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeee---
Q 048643 393 RSHVNMAKLFERLVASDKRVS------PSAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAV--- 463 (506)
Q Consensus 393 ~~~~~~a~~l~~~l~~~~~~~------p~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~--- 463 (506)
++..++.++|+..+.+. +|. ++++..-+.+.. .+..+.++|.+++...+....
T Consensus 408 ~~l~~ns~yfr~~l~~~-gfivyG~~dSpVvplll~~~~-----------------k~~~f~r~~l~~nigvVvvgfPat 469 (519)
T KOG1357|consen 408 ERLAENSRYFRWELQKM-GFIVYGNNDSPVVPLLLYGPA-----------------KIVAFSREMLERNIGVVVVGFPAT 469 (519)
T ss_pred HHHHhhhHHHHHhhhcC-cEEEecCCCCCcceeeecCcc-----------------cccHHHHHHHhcCceEEEEeCCCc
Confidence 99999999999999987 665 233333333321 123444455555553332221
Q ss_pred ECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 048643 464 CGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAF 498 (506)
Q Consensus 464 ~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l 498 (506)
+--....|+|... +.+.|+++.+++.+.+..++.
T Consensus 470 pl~e~r~R~c~Sa-~ht~e~ld~~l~~i~~~g~~~ 503 (519)
T KOG1357|consen 470 PLLESRARFCLSA-SHTKEDLDRALEVIDRVGDED 503 (519)
T ss_pred hHHHhHHHhhhcc-cccHHHHHHHHHHHhhhchhh
Confidence 1123457998854 455569999999999887543
No 304
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.44 E-value=2.7e-11 Score=125.15 Aligned_cols=232 Identities=16% Similarity=0.190 Sum_probs=166.7
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHH
Q 048643 131 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQI 210 (506)
Q Consensus 131 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~ 210 (506)
..-|.+ +..++.+|.+.++ ++++|+|.||...+.+... ++..|++...+|-|+..+..+
T Consensus 71 ~i~eAq--e~aA~~fgAd~ty--------FvvNGTS~ank~vi~a~~~-----------~GD~VLvdRN~HKSi~~glil 129 (557)
T COG1982 71 PIKEAQ--ELAARVFGADHTY--------FVVNGTSTANKAVINAVLT-----------PGDKVLVDRNCHKSIHHGLIL 129 (557)
T ss_pred cHHHHH--HHHHHHhCCCceE--------EEECCccHHHHHHHHhhcC-----------CCCEEEecCCccHHHHHHHHH
Confidence 344444 8889999999875 8889999999877776554 788999999999999999999
Q ss_pred hCCCCCCeEEEecCCCC----CcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeec
Q 048643 211 VGIDLKNFRAIKTTKSS----SYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDA 286 (506)
Q Consensus 211 ~G~g~~~v~~v~~~~~~----~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDa 286 (506)
.|. ..+++....+. -+.++.+.+++++.+..... .++++|.+ |..|.+-++++|.+.++++++|+.+|.
T Consensus 130 aGa---~Pvyl~p~~np~~gi~ggI~~~~~~~~l~~~~~~~---k~~vitnp-TYdGv~~n~~~i~~~~~~~~a~v~~de 202 (557)
T COG1982 130 AGA---TPVYLEPSRNPLYGIIGGIPLETFKEALLAHPDAE---KLAVITNP-TYDGVCYNLRKIVELLHHYGAWVLYDE 202 (557)
T ss_pred cCC---ceEEecCCCCccccccCCCCHHHHHHHHHhChhhh---eeEEEecC-ccceEeecHHHHHHHHhhcCceEEhhh
Confidence 999 77776654322 25799999999987654321 25566655 688999999999999999999999999
Q ss_pred ccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCc-----hhHHhhhc----CCccccCCccccCCCc
Q 048643 287 AYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDP-----SALVSSLS----TNPEYLKNKATESKQV 357 (506)
Q Consensus 287 A~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~-----~~l~~~~~----~~~~yl~~~~~~~~~~ 357 (506)
+++...-+++..... .--..+|.++.+.||.+.+--.++++.+++. ..+.+++. ..|.|.-
T Consensus 203 ah~~~~~~~~~l~~~-~~~~~~~~~tqS~HK~l~alSQaS~iHv~~~~~~~~~r~nea~~~h~STSPsY~l--------- 272 (557)
T COG1982 203 AHPAHFDFSPMLPES-ALNGGADFVTQSTHKLLAALSQASMIHVKDGRAVNHERFNEALMMHQSTSPSYPL--------- 272 (557)
T ss_pred cCcccccccccCcch-hhhcCceEEEechhhhhhhhhhhHHHhhCCCccCCHHHHHHHHHHHccCCchHHH---------
Confidence 998877766544331 1113799999999999998888999999872 33333331 1222211
Q ss_pred cCCCCccccCCCCCCchHH-HHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc
Q 048643 358 VDYKDWQITLSRRFRSLKL-WLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS 413 (506)
Q Consensus 358 ~~~~~~~~~~sr~~~al~~-~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~ 413 (506)
+.++-+ -..+...|+.-+++-++..++.++++++.+.+.++|.
T Consensus 273 -------------~ASlD~Ar~~~~~~G~~l~~~~~~~~i~~r~~~~~~~~~~~~~~ 316 (557)
T COG1982 273 -------------MASLDVARMQEGNAGRELWQEVIDEAIDFRKALRRLINEIGFFP 316 (557)
T ss_pred -------------HHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCee
Confidence 011222 0111222444455568889999999999999987665
No 305
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.43 E-value=5.8e-11 Score=119.52 Aligned_cols=220 Identities=18% Similarity=0.199 Sum_probs=153.6
Q ss_pred ccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHH
Q 048643 125 ISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCAL 204 (506)
Q Consensus 125 ~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~ 204 (506)
...|....+|+. ++.|=|.. .++.+++|..|+..++.+... +++.|+++...+-..
T Consensus 60 ~~nPT~~~lE~~----~a~LEg~~---------~~~afsSGmaAI~~~~l~ll~-----------~GD~vl~~~~~YG~t 115 (396)
T COG0626 60 TGNPTRDALEEA----LAELEGGE---------DAFAFSSGMAAISTALLALLK-----------AGDHVLLPDDLYGGT 115 (396)
T ss_pred CCCccHHHHHHH----HHHhhCCC---------cEEEecCcHHHHHHHHHHhcC-----------CCCEEEecCCccchH
Confidence 356767777765 55554443 578888888777666655443 456677776666443
Q ss_pred H----HHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHH-HHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhC
Q 048643 205 Q----KAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINL-DVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFG 279 (506)
Q Consensus 205 ~----ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~-~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g 279 (506)
. +....+|+ ++..++. .+.+.+++++.+ .+ .+|.+..++|++..+-||.+|+++|+++|
T Consensus 116 ~~~~~~~l~~~gi---~~~~~d~-------~~~~~~~~~~~~~~t------k~v~lEtPsNP~l~v~DI~~i~~~A~~~g 179 (396)
T COG0626 116 YRLFEKILQKFGV---EVTFVDP-------GDDEALEAAIKEPNT------KLVFLETPSNPLLEVPDIPAIARLAKAYG 179 (396)
T ss_pred HHHHHHHHHhcCe---EEEEECC-------CChHHHHHHhcccCc------eEEEEeCCCCcccccccHHHHHHHHHhcC
Confidence 3 34455677 7777753 355566666664 44 38999999999999999999999999999
Q ss_pred CEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCc--ceEEEEeCchhHHhhhcCCccccCCccccCCCc
Q 048643 280 IWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLD--CCCLWVKDPSALVSSLSTNPEYLKNKATESKQV 357 (506)
Q Consensus 280 ~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~ 357 (506)
+.++||..|+.+++.-|- .. +||.+.-+..|+++..-+ .|+++.++.......+...-.++
T Consensus 180 ~~vvVDNTfatP~~q~PL-~~------GaDIVvhSaTKyl~GHsDvl~G~v~~~~~~~~~~~~~~~~~~~---------- 242 (396)
T COG0626 180 ALVVVDNTFATPVLQRPL-EL------GADIVVHSATKYLGGHSDVLGGVVLTPNEELYELLFFAQRANT---------- 242 (396)
T ss_pred CEEEEECCcccccccChh-hc------CCCEEEEeccccccCCcceeeeEEecChHHHHHHHHHHHHhhc----------
Confidence 999999999887765441 11 799999999999986644 55555555443221111100011
Q ss_pred cCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc
Q 048643 358 VDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS 413 (506)
Q Consensus 358 ~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~ 413 (506)
+--..+...|+.+| |.+-+.-+++++.++|..+++.|++.|.++
T Consensus 243 ----------G~~l~p~dA~l~lR--GlkTL~~Rm~~~~~nA~~IA~~L~~~p~V~ 286 (396)
T COG0626 243 ----------GAVLSPFDAWLLLR--GLRTLALRMERHNENALKIAEFLADHPKVK 286 (396)
T ss_pred ----------CCCCCHHHHHHHHh--ccchHHHHHHHHHHHHHHHHHHHhcCCCeE
Confidence 11224566688888 668889999999999999999999988766
No 306
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=99.43 E-value=3.5e-11 Score=122.87 Aligned_cols=325 Identities=14% Similarity=0.121 Sum_probs=206.1
Q ss_pred ccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHH
Q 048643 125 ISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCAL 204 (506)
Q Consensus 125 ~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~ 204 (506)
+++.+..++=..+.+|||++.|++.- .+-.++|.++-.++|.+.|..... .|.. .+-+.+++-.+|-..
T Consensus 575 eQaqGY~~lf~~Le~~Lc~iTG~D~~--------s~QPNsGA~GEYaGL~~IRaY~~~-kge~--hRnvClIPvSAHGTN 643 (1001)
T KOG2040|consen 575 EQAQGYQQLFTELEKDLCEITGFDSF--------SLQPNSGAQGEYAGLRVIRAYLES-KGEG--HRNVCLIPVSAHGTN 643 (1001)
T ss_pred HHHhhHHHHHHHHHHHhheeecccce--------eecCCCCcccchhhHHHHHHHHHh-ccCC--cceeEEEeecccCCC
Confidence 45556677777788999999999742 122334555566677777665332 2322 566777888899999
Q ss_pred HHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCccc-ChhHHHHHHHHhCCEEE
Q 048643 205 QKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVD-PLKPLCDVAKQFGIWVH 283 (506)
Q Consensus 205 ~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~id-pl~~I~~ia~~~g~~lh 283 (506)
...|.++|+ +|++|.++. +|.+|..+|+++.++...+ -.++.+|.++|. |.++ .+++++++.++||--+.
T Consensus 644 PASA~Magm---kvvpV~~~~--~G~id~~dLk~kaekh~~~---Laa~MvTYPST~-GvfE~~i~d~cd~iHehGGQVY 714 (1001)
T KOG2040|consen 644 PASAAMAGM---KVVPVGCDA--NGNIDMVDLKAKAEKHKDN---LAALMVTYPSTH-GVFEEGIDDICDIIHEHGGQVY 714 (1001)
T ss_pred hhhHHhcCC---EEEEeeccC--CCCccHHHHHHHHHHhhhh---hheeEEeccccc-ccccccHHHHHHHHHhcCCEEE
Confidence 999999999 999999886 5799999999998876542 346788888765 7775 59999999999999999
Q ss_pred eecccccccc-cCccchhhhcCCCCCCeeEEcCccccCCCCcc-----eEEEEeCchhHHhhhcCCccccCCccccCC-C
Q 048643 284 VDAAYAGSAC-ICPEFQHFIDGVEGADSFSLNAHKWFFTTLDC-----CCLWVKDPSALVSSLSTNPEYLKNKATESK-Q 356 (506)
Q Consensus 284 VDaA~gg~~~-~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~-----g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~-~ 356 (506)
.|||-=-... ++ .... -++|....+.||+|..|-|. |.+.||. .-++|+...+--+. .
T Consensus 715 lDGANMNAqVGlc-~pGd-----~GaDV~HLNLHKTFcIPHGGGGPg~gPIgVK~---------HLapfLP~HpVvs~~~ 779 (1001)
T KOG2040|consen 715 LDGANMNAQVGLC-RPGD-----IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKK---------HLAPFLPSHPVVSPGR 779 (1001)
T ss_pred ecCCCccceeccc-CCcc-----ccccceeecccceeeecCCCCCCCCCccchhh---------hccccCCCCCccCCCC
Confidence 9997522211 12 1111 28999999999999988654 4454442 12345433211100 0
Q ss_pred ccCCCCccccCCCCCC---chH-HHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCC--c-c-ceEEEe----ecCC
Q 048643 357 VVDYKDWQITLSRRFR---SLK-LWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRV--S-P-SAVMDK----LKPK 424 (506)
Q Consensus 357 ~~~~~~~~~~~sr~~~---al~-~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~--~-p-~~v~f~----~~~~ 424 (506)
..+-...+--.+.++. .|+ -|++++.+|..|++..-.-.+-+|.|+.++|+.+=.+ + + +.|.-. ..+-
T Consensus 780 ~~~~~~~gsVsaaP~Gsa~ILpISwaYikmMG~~GL~~as~~AiLNaNYMakRLe~hYkil~~~~~~~vaHEFIlD~r~f 859 (1001)
T KOG2040|consen 780 PEDTSPVGSVSAAPWGSALILPISWAYIKMMGSGGLKDASKIAILNANYMAKRLESHYKILFRGENGLVAHEFILDLRPF 859 (1001)
T ss_pred CCCCCCccceeccCCCcceeehhHHHHHHHhcccccchhhHHHhhhhHHHHHHHhhccceeEecCCcceeeeeeeechhh
Confidence 0000001111112221 133 4999999999999999999999999999999986221 1 2 322221 1111
Q ss_pred CcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeee-eECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 048643 425 YENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHA-VCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAFL 499 (506)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~-~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l~ 499 (506)
+ + .. +.-...+.++|+.-|. -.|| .|.-.+.+-+-.+ ..-+.+++|++.+++-.+-+++.
T Consensus 860 K-----~--~a-----gieavDvAKRL~DYgF--HaPTmswPV~gtLMIEPT-ESE~k~ElDRfcdAliSIreEI~ 920 (1001)
T KOG2040|consen 860 K-----K--TA-----GIEAVDVAKRLMDYGF--HAPTMSWPVAGTLMIEPT-ESEDKAELDRFCDALISIREEIA 920 (1001)
T ss_pred c-----c--cc-----CCcHHHHHHHHHhccC--CCCccccccCCceEeccC-ccccHHHHHHHHHHHHHHHHHHH
Confidence 0 0 00 0112456677777776 2333 2322334444443 34456899999999988777763
No 307
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.42 E-value=6.1e-10 Score=116.40 Aligned_cols=313 Identities=11% Similarity=-0.003 Sum_probs=176.0
Q ss_pred HHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHh
Q 048643 132 ELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIV 211 (506)
Q Consensus 132 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~ 211 (506)
..+.++.+.|++++.-.. ...+|+++||+||..|+..||... + ++.+|.+....|-+..-+..+.
T Consensus 86 ~~~~~la~~L~~~~~~~~-------~~v~f~~SGseA~e~AlklAr~~t-------g-r~~ii~~~~~yHG~t~~~~s~~ 150 (433)
T PRK08117 86 ESILKLAEELAEITPGGL-------DCFFFSNSGAEAIEGALKLAKHVT-------K-RPYIISFTGCFHGRTLGALSVT 150 (433)
T ss_pred HHHHHHHHHHHHhCCCCC-------CEEEEeCcHHHHHHHHHHHHHHhc-------C-CCeEEEECCCcCCcCHHHHhhc
Confidence 445556677777762111 156888999999999999998752 1 3345555666776655544332
Q ss_pred CC--------C--CCCeEEEecCCCCCc----------ccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC----
Q 048643 212 GI--------D--LKNFRAIKTTKSSSY----------GLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP---- 267 (506)
Q Consensus 212 G~--------g--~~~v~~v~~~~~~~~----------~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp---- 267 (506)
+- . ...+..+|....... .-|+++|++.+++.. .+..+.+|++.-.....|.+-|
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~aavi~Epi~~~~G~~~~~~~~ 229 (433)
T PRK08117 151 TSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLECLRDLESLFKHQV-TPEEVAAVIIEPVLGEGGYIVPPKSF 229 (433)
T ss_pred CCCccccccCCCCCCCcEEeCCCccccccccCchhHHHHHHHHHHHHHHHhcc-CCCcEEEEEECCeeCCCCCccCCHHH
Confidence 21 0 113445554311000 025667777775421 1224556666666666788877
Q ss_pred hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCcccc
Q 048643 268 LKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYL 347 (506)
Q Consensus 268 l~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl 347 (506)
+++|.++|++||+++++|.+|+|+......+.....++ ..|.+ ..-|.++..+..|+++.++. . ...+... .+.
T Consensus 230 l~~l~~lc~~~g~llI~DEv~tG~gr~G~~~~~~~~gv-~pDi~--t~sK~lg~G~pigav~~~~~-i-~~~~~~~-~~~ 303 (433)
T PRK08117 230 LKKLREICDRHGILLIFDEVQTGFGRTGEWFAAQTFGV-VPDIM--TIAKGIASGLPLSAVVASKE-L-MEQWPLG-SHG 303 (433)
T ss_pred HHHHHHHHHHcCCEEEEecchhccCccccchhHhhcCC-CCCEe--ehhhhccCCCcceeEEEcHH-H-HhhccCC-CCC
Confidence 99999999999999999999987422111111111122 34654 55799986677888777643 2 2222110 000
Q ss_pred CCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcC----CCCc--c---ceEE
Q 048643 348 KNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASD----KRVS--P---SAVM 418 (506)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~----~~~~--p---~~v~ 418 (506)
.+. .+.+......-.+|+.+..+ ++.++..++.+++.+.|+++ +-+. + .++.
T Consensus 304 ---------------~T~-~~np~~~aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~Gl~~g 364 (433)
T PRK08117 304 ---------------TTF-GGNPVACAAALATLEVIKEE---KLLDNANEMGAYALERLEVLKEKHPVIGDVRGIGLMIG 364 (433)
T ss_pred ---------------CCC-CcCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHhcCCceeeeecCCcEEE
Confidence 011 11111222333444444333 34556666777777777653 2111 1 2333
Q ss_pred EeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 048643 419 DKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAF 498 (506)
Q Consensus 419 f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l 498 (506)
+.+.++. . .. .......+.+.+.+.|+++.... ....++|++. ....++++|+++++.|.++.+++
T Consensus 365 i~~~~~~--------~-~~--~~~~~~~~~~~l~~~Gv~~~~~g--~~~~~lRl~p-~~~~t~~~i~~~~~~l~~~l~~~ 430 (433)
T PRK08117 365 IEIVDPD--------G-EP--DGDAVEKILDKCLEKGLLFYLCG--NAGNVLRMIP-PLTVTKEEIDEGLDILDEALTEY 430 (433)
T ss_pred EEEecCC--------C-Cc--chHHHHHHHHHHHHCCCEEeecC--CCCCEEEEeC-CccCCHHHHHHHHHHHHHHHHHH
Confidence 3333220 0 00 01334567788888897553321 1246899997 35668889999999999988776
Q ss_pred H
Q 048643 499 L 499 (506)
Q Consensus 499 ~ 499 (506)
.
T Consensus 431 ~ 431 (433)
T PRK08117 431 E 431 (433)
T ss_pred h
Confidence 4
No 308
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.42 E-value=5.1e-10 Score=116.35 Aligned_cols=302 Identities=11% Similarity=0.062 Sum_probs=175.3
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHH
Q 048643 131 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQI 210 (506)
Q Consensus 131 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~ 210 (506)
.....++.+.|++++.-+.. ..+|+++||+||-.|+..||....++ | +..+|......|-...-+...
T Consensus 116 ~~~~~~lAe~L~~~~p~~~~-------~v~f~~SGsEA~e~AlklAr~~t~~~----g-r~~ii~~~~~yHG~t~~~ls~ 183 (442)
T TIGR03372 116 DPLRALLAKTLAALTPGKLK-------YSFFCNSGTESVEAALKLAKAYQSPR----G-KFTFIAASGAFHGKSLGALSA 183 (442)
T ss_pred CHHHHHHHHHHHHhCCCCcC-------EEEEeCCchHHHHHHHHHHHHHHhhc----C-CcEEEEECCCccCCCHHHhhc
Confidence 34455667788887642222 57899999999999999999763211 1 223444555556443333333
Q ss_pred hCC-------C--CCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC----hhHHHHHHHH
Q 048643 211 VGI-------D--LKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP----LKPLCDVAKQ 277 (506)
Q Consensus 211 ~G~-------g--~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp----l~~I~~ia~~ 277 (506)
.|- + ...++.+|.+ |.+.+++.+++....+....+|++.-.....|.+-| +++|.++|++
T Consensus 184 t~~~~~~~~~~p~~~~~~~~p~~-------d~~~~~~~l~~~~~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~ 256 (442)
T TIGR03372 184 TAKPAFRKPFMPLLPGFHHVAFG-------DIEAMLKALNECKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDE 256 (442)
T ss_pred cCCcccCCCCCCCCCCCEEeCCC-------CHHHHHHHHHHHhcCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHH
Confidence 221 0 1123444432 678888888654434445666777666666788877 9999999999
Q ss_pred hCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCC-CcceEEEEeCchhHHhhhcCCccccCCccccCCC
Q 048643 278 FGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQ 356 (506)
Q Consensus 278 ~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~ 356 (506)
||+.+++|.++.|+.....-+.....|+ ..|.+++ -|.++.. +++|+++.++. +.+.+... ++....
T Consensus 257 ~g~llI~DEV~tG~GRtG~~~a~e~~gv-~PDivt~--gK~lg~G~~Pigavv~~~~--i~~~~~~~-~~~~~~------ 324 (442)
T TIGR03372 257 FGALLILDEVQTGMGRTGKMFACEHEGV-QPDILCL--AKALGGGVMPIGATIATEA--VFSVLFDN-PFLHTT------ 324 (442)
T ss_pred cCCEEEEeecccCCCccccchhhhhcCC-CCCeeee--hhhhcCCcccceEEEecHH--HHHhhhcc-CccccC------
Confidence 9999999999976433221111112244 4787774 6988765 36777777643 22333211 121110
Q ss_pred ccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcC----CC-Cc----c-ceEEEeecCCCc
Q 048643 357 VVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASD----KR-VS----P-SAVMDKLKPKYE 426 (506)
Q Consensus 357 ~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~----~~-~~----p-~~v~f~~~~~~~ 426 (506)
|+ .+.+......-++|+.+-.++ +.++..++.++|.+.|+++ |. +. . .++.+.+...
T Consensus 325 -------T~-~gnp~~~Aaa~a~L~~i~~~~---l~~~~~~~G~~l~~~L~~l~~~~~~~i~~vRG~Gl~~giel~~~-- 391 (442)
T TIGR03372 325 -------TF-GGNPLACAAALATINELLEKN---LPAQAAIKGDFLLDGFQQLAAEYPDLIIEARGKGLLMAIEFRDN-- 391 (442)
T ss_pred -------CC-CCCHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHHhCCCceEEEecceEEEEEEeCCh--
Confidence 11 111222233344455554443 4455566777777777553 31 11 1 3344444321
Q ss_pred ccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHH
Q 048643 427 NCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQ 494 (506)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~ 494 (506)
.....+.+.+.++|.+ +.... .+...+|+.. ....|++|||+++++|++.
T Consensus 392 ---------------~~~~~i~~~l~~~Gvl-~~~~~-~~~~~lr~~P-pl~~t~~~id~~~~~l~~~ 441 (442)
T TIGR03372 392 ---------------EIGYAFAKELFQQNIL-VAGTL-NNAKSIRIEP-PLTITIEQCALVIKAAKDA 441 (442)
T ss_pred ---------------HHHHHHHHHHHHCCcE-EeecC-CCCCEEEEEC-CcccCHHHHHHHHHHHHHh
Confidence 2345677888888864 43321 1236899988 4667888999999999875
No 309
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.39 E-value=3.3e-10 Score=113.57 Aligned_cols=310 Identities=12% Similarity=0.033 Sum_probs=185.5
Q ss_pred hHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHH
Q 048643 130 ATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQ 209 (506)
Q Consensus 130 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~ 209 (506)
.+++|.++.+.+.++++.-+ ..-|+++||||++.|+..||... | ++.+|-+....|-+.....-
T Consensus 91 Pte~Ei~~Aell~~~~p~~e--------~vrfvnSGTEAtmsAiRlARa~T-------g-R~kIikF~G~YHG~~D~~lv 154 (432)
T COG0001 91 PTELEVELAELLIERVPSIE--------KVRFVNSGTEATMSAIRLARAYT-------G-RDKIIKFEGCYHGHSDSLLV 154 (432)
T ss_pred CCHHHHHHHHHHHHhcCccc--------EEEEecchhHHHHHHHHHHHHhh-------C-CCeEEEEcCCCCCCccHHHh
Confidence 47888888899999987633 56889999999999999999763 1 23344445556644444333
Q ss_pred HhC-------------CCC---CCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC----hh
Q 048643 210 IVG-------------IDL---KNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP----LK 269 (506)
Q Consensus 210 ~~G-------------~g~---~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp----l~ 269 (506)
-.| +.. +.++.+|. .|+++|++++++. |....+|++.-.-.+.|.|-| ++
T Consensus 155 ~agsg~~t~g~p~s~Gvp~~~a~~ti~~~y-------ND~~al~~~~~~~---g~~IAaVIvEPv~gn~g~i~p~~~Fl~ 224 (432)
T COG0001 155 KAGSGAATLGSPSSPGVPADVAKHTLVLPY-------NDLEALEEAFEEY---GDDIAAVIVEPVAGNMGVVPPEPGFLE 224 (432)
T ss_pred hcCcCcccCCCCCCCCCChhhhccEEEecC-------CCHHHHHHHHHHc---CCcEEEEEeccccCCCCCCCCCHHHHH
Confidence 222 211 23445553 3899999998874 334567777777778888866 78
Q ss_pred HHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCC
Q 048643 270 PLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKN 349 (506)
Q Consensus 270 ~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~ 349 (506)
+|.++|+++|+.|+.|....|+-...-. ....-|+ ..|-.|+ .|.++..+++|++-.|.. +.+.+... ..+++
T Consensus 225 ~Lr~lt~e~G~lLI~DEViTGFR~~~gG-aq~~~gi-~PDlttl--GKiIGGGlP~ga~gGr~e--iM~~~~p~-g~vyq 297 (432)
T COG0001 225 GLRELTEEHGALLIFDEVITGFRVALGG-AQGYYGV-EPDLTTL--GKIIGGGLPIGAFGGRAE--IMEQLAPL-GPVYQ 297 (432)
T ss_pred HHHHHHHHcCcEEEEecchhhcccCCcc-cccccCc-Ccchhhh--hhhhcCCcceeeeccHHH--HHhhhCCC-CCccc
Confidence 9999999999999999988766443211 1112233 4666654 588888888888766542 22222111 11221
Q ss_pred ccccCCCccCCCCccccCCCCCCchH---HHHHHHHhch-hH-HHHHHHHHHHHHHHHHHHHHcCCCCc-----c-ceEE
Q 048643 350 KATESKQVVDYKDWQITLSRRFRSLK---LWLVIRNYGV-AN-LRHFLRSHVNMAKLFERLVASDKRVS-----P-SAVM 418 (506)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~sr~~~al~---~~~~l~~~G~-~g-~~~~i~~~~~~a~~l~~~l~~~~~~~-----p-~~v~ 418 (506)
. ++-+..++. -.++++.+-. ++ |+.+.+...+++.-+.+.+.+. ++. . ++++
T Consensus 298 a----------------GT~sgnplamaAG~atl~~l~~~~~~y~~l~~~~~~L~~gl~~~~~~~-g~~~~v~~~gsm~~ 360 (432)
T COG0001 298 A----------------GTLSGNPLAMAAGLATLEELMTEEGVYERLDALGERLAEGLRAAAERH-GIPLTVNRVGSMFG 360 (432)
T ss_pred c----------------CCCCCcHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHh-CCCeEEeeecceEE
Confidence 1 111223333 3444554433 33 4444444444444444444444 444 2 7777
Q ss_pred EeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 048643 419 DKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAF 498 (506)
Q Consensus 419 f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l 498 (506)
+.+.+...++..+. ...+.. ...++...|.++|+ ++.+..+ ...+++...+++||++.+++++++.+++
T Consensus 361 i~F~~~~~~n~~da---~~sd~~-~~~~~~~~~l~~GV-~l~ps~~------ea~flS~ahte~di~~~~~a~~~~~~~~ 429 (432)
T COG0001 361 IFFTEEGVRNYADA---KRSDVE-RFAKFFHHLLNRGV-YLAPSQF------EAGFLSTAHTEEDIDRTLEAADEAFKEL 429 (432)
T ss_pred EEecCCCCCCHHHH---HhhchH-HHHHHHHHHHhCCc-ccCCccc------cceeeecccCHHHHHHHHHHHHHHHHHh
Confidence 77665322211111 011112 23445558888886 6666543 3344556678889999999999988877
Q ss_pred Hc
Q 048643 499 LT 500 (506)
Q Consensus 499 ~~ 500 (506)
..
T Consensus 430 ~~ 431 (432)
T COG0001 430 AG 431 (432)
T ss_pred hc
Confidence 53
No 310
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.39 E-value=1.9e-09 Score=111.38 Aligned_cols=303 Identities=11% Similarity=0.054 Sum_probs=171.0
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHH
Q 048643 131 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQI 210 (506)
Q Consensus 131 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~ 210 (506)
++...++.+.|+++.+.. + ..+|+++||+||..|+..||.....+ |....++.+|......|-...-+...
T Consensus 81 ~~~~~~la~~L~~~~~~~-~-------~v~f~~sGseA~e~AlklAr~~~~~~-g~~~~r~~ii~~~~~yHG~t~~~~s~ 151 (408)
T PRK04612 81 SAPPLKLAEELVTASRFA-E-------KVFLCNSGTEANEAAIKLVRKWASSQ-GRPADKRVIVTFRGSFHGRTLAAVTA 151 (408)
T ss_pred CHHHHHHHHHHHhhCCCC-C-------EEEEcCchHHHHHHHHHHHHHHHHhh-CCCCCCcEEEEECCCcCCccHHHHHh
Confidence 334455667777775432 1 57999999999999999999764221 11000223444555566444434333
Q ss_pred hCCCC---------CCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCC-cccC----hhHHHHHHH
Q 048643 211 VGIDL---------KNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAIT-AVDP----LKPLCDVAK 276 (506)
Q Consensus 211 ~G~g~---------~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG-~idp----l~~I~~ia~ 276 (506)
.|... ..++.+| .-|++.|+++++. ..+.+|++. +...+| .+.| +++|.++|+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~-------~~d~~~l~~~~~~-----~~~aavi~e-P~~~~gg~~~~~~~~l~~l~~l~~ 218 (408)
T PRK04612 152 TAQPKYQEGYEPLPGGFRYVD-------FNDVEALEAAMAG-----GDVAAVMLE-PIQGEGGVMPAAPGFLARVRALCD 218 (408)
T ss_pred cCCcccccCCCCCCCCceEcC-------CCCHHHHHHhhCC-----CCEEEEEEC-CccCCCCCcCCCHHHHHHHHHHHH
Confidence 33210 1122222 1278888888742 123444443 333344 4332 899999999
Q ss_pred HhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCC
Q 048643 277 QFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQ 356 (506)
Q Consensus 277 ~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~ 356 (506)
+||+++++|.+|.|+.....-+.....++ ..|.+++ -|.++..+..|+++.++. +.+.+... ..
T Consensus 219 ~~g~llI~DEv~tg~gr~G~~~a~~~~~~-~pdi~t~--~K~l~~G~piga~~~~~~--~~~~~~~~----~~------- 282 (408)
T PRK04612 219 QHDALLVLDEIQCGMGRTGTLFAHWQEQV-TPDIVTL--AKALGGGFPIGAMLAGPK--VAETMQFG----AH------- 282 (408)
T ss_pred HcCCEEEEeccccCCCcCCchhhhhhcCC-CCCEEEE--cchhcCCCceEEEEECHH--HHhhhcCC----Cc-------
Confidence 99999999999987433211111111111 3455554 688876677888877643 22333211 00
Q ss_pred ccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcC----CCCc---c--ceEEEeecCCCcc
Q 048643 357 VVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASD----KRVS---P--SAVMDKLKPKYEN 427 (506)
Q Consensus 357 ~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~----~~~~---p--~~v~f~~~~~~~~ 427 (506)
..+. ++.+.....+..+|+.+-. .+++++..++.++|.+.|+++ +-+. . .++.+.+.+..
T Consensus 283 -----~~t~-~~~p~~~aaa~a~L~~~~~---~~l~~~~~~~g~~l~~~l~~l~~~~~~i~~vrg~Gl~~~i~~~~~~-- 351 (408)
T PRK04612 283 -----GTTF-GGNPLAAAVARVALRKLAS---PQIAANVARQSAALRAGLEALNAEFGVFAQVRGRGLMLGAVLAPAH-- 351 (408)
T ss_pred -----CCCC-CCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhhCCCeeeeeccceEEEEEecCch--
Confidence 0011 1212233334444554433 345677777888888888664 1111 1 33344333210
Q ss_pred cccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHc
Q 048643 428 CHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAFLT 500 (506)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l~~ 500 (506)
......+.+.+.+.|... .+ .|...+|++. ....+++||+++++.|++...++.+
T Consensus 352 -------------~~~a~~i~~~l~~~Gvlv-~~---~g~~~lRl~P-pl~it~eeid~~l~~l~~~l~~~~~ 406 (408)
T PRK04612 352 -------------AGQAGAILDLAAEHGLLL-LQ---AGPDVLRFVP-ALNLTDAELADGLARLRLALADYVA 406 (408)
T ss_pred -------------hhHHHHHHHHHHHCCeEE-ee---CCCCEEEEcC-CccCCHHHHHHHHHHHHHHHHHHhh
Confidence 122456777888888754 32 2447899987 5677889999999999999877654
No 311
>PRK12403 putative aminotransferase; Provisional
Probab=99.39 E-value=1.8e-09 Score=113.33 Aligned_cols=325 Identities=11% Similarity=0.004 Sum_probs=174.7
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEE-EeCCCCchHHHHHHH
Q 048643 131 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVV-YGSDQTHCALQKAAQ 209 (506)
Q Consensus 131 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v-~~s~~~H~s~~ka~~ 209 (506)
+....++.+.|+++++-..+ ..+|+++||+||..|+.+||...... |.. .+.+| ......|-+..-+..
T Consensus 97 ~~~~~~lae~L~~~~p~~~~-------~v~f~~SGseA~e~AiklAr~~~~~~-g~~--~r~~ii~~~~~yHG~t~~~~s 166 (460)
T PRK12403 97 HPAVIELSELLFSLLPGHYS-------HAIYTNSGSEANEVLIRTVRRYWQVL-GKP--QKKIMIGRWNGYHGSTLAATA 166 (460)
T ss_pred CHHHHHHHHHHHHhCCCCcC-------EEEEeCCcHHHHHHHHHHHHHHHHhh-CCC--CCcEEEEECCCcCcccHhhhh
Confidence 34455566778887752212 57899999999999999998753211 111 22333 334445766665555
Q ss_pred HhCCCC--------CCeEEEecCCC--CCccc--------CHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC----
Q 048643 210 IVGIDL--------KNFRAIKTTKS--SSYGL--------SPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP---- 267 (506)
Q Consensus 210 ~~G~g~--------~~v~~v~~~~~--~~~~~--------d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp---- 267 (506)
+.|... ..+..+|.... ..+.+ +.+.|++.+.+.. ...+.+|++.-.....|.+-|
T Consensus 167 ~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~~~~~~--~~~iaavI~Epv~g~gG~~~~~~~y 244 (460)
T PRK12403 167 LGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEFGRRAALQLEEKILELG--AENVAGFVAEPFQGAGGMIFPPESY 244 (460)
T ss_pred cCCCccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHHhC--CCceEEEEEccccCCCCCccCCHHH
Confidence 544311 12444442210 00011 1355666654321 123456666655556687777
Q ss_pred hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCC-cceEEEEeCchhHHhhhcCCc-c
Q 048643 268 LKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTL-DCCCLWVKDPSALVSSLSTNP-E 345 (506)
Q Consensus 268 l~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~-~~g~~~~r~~~~l~~~~~~~~-~ 345 (506)
+++|.++|++||+.+++|.+++|+.....-+.....|+ ..|.++ .-|.++..+ +.|++++++. +.+.+.... .
T Consensus 245 l~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~e~~gv-~PDiv~--~gK~lggG~~Piga~v~~~~--i~~~~~~~~~~ 319 (460)
T PRK12403 245 WPEIQRICRQYDVLLCADEVIGGFGRTGEWFAHEHFGF-EPDTLS--IAKGLTSGYVPMGGLVLSKR--IAEALVEQGGV 319 (460)
T ss_pred HHHHHHHHHHcCCEEEEeccccCCCcCchhhhhhhcCC-CCCeEE--EcccccccccceEEEEECHH--HHHHHhcCCCc
Confidence 99999999999999999999977644332222122345 368887 469888664 6777777643 223332111 1
Q ss_pred ccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHH-HHHHHHHHHHHc----CCCCc----c-c
Q 048643 346 YLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHV-NMAKLFERLVAS----DKRVS----P-S 415 (506)
Q Consensus 346 yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~-~~a~~l~~~l~~----~~~~~----p-~ 415 (506)
|+... |. .+.+.......++|+.+-.+. ++++.. ++.++|.+.|++ .|-+. . .
T Consensus 320 ~~~~~-------------T~-~gnPl~~Aaala~L~~i~~~~---l~~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl 382 (460)
T PRK12403 320 FAHGL-------------TY-SGHPVAAAVAIANLKALRDEG---VVTRVKDDTGPYLQRCLREVFGDHPLVGEVQGAGL 382 (460)
T ss_pred cccCC-------------CC-CCCHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHHhcCCCEEeEeecce
Confidence 11100 10 111122233444555554443 344553 566666666643 33222 1 3
Q ss_pred eEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 048643 416 AVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQL 495 (506)
Q Consensus 416 ~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~ 495 (506)
++.+.+....... .....+ ......+.+.+.++|.+.. +. + ..+|++. ....|++||+++++.++++.
T Consensus 383 ~~gie~~~~~~~~----~~~~~~--~~~~~~~~~~~~~~Gll~~-~~---~-~~~~l~P-pl~it~~eid~~~~~l~~al 450 (460)
T PRK12403 383 VAALQFAEDKATR----KRFANE--NDLAWRCRTIGFEEGVIIR-ST---L-GRMIMAP-ALVAGRAEIDELVDKTRIAV 450 (460)
T ss_pred EEEEEEccCcccc----ccccch--hHHHHHHHHHHHhCCEEEE-ec---C-CEEEEEC-CCCCCHHHHHHHHHHHHHHH
Confidence 4444443210000 000000 1223456677788887543 21 1 2477766 34568899999999999998
Q ss_pred HHHHcc
Q 048643 496 EAFLTT 501 (506)
Q Consensus 496 ~~l~~~ 501 (506)
+++.++
T Consensus 451 ~~~~~~ 456 (460)
T PRK12403 451 DRTARE 456 (460)
T ss_pred HHHHHH
Confidence 887543
No 312
>PRK06541 hypothetical protein; Provisional
Probab=99.38 E-value=1.6e-09 Score=113.65 Aligned_cols=326 Identities=10% Similarity=0.031 Sum_probs=178.7
Q ss_pred HHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHh
Q 048643 132 ELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIV 211 (506)
Q Consensus 132 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~ 211 (506)
+...++.+.|++++.-+-+ ..+|+++||+|+..|+..||...... |..+ +..+|......|-...-+....
T Consensus 95 ~~~~~la~~l~~~~p~~~~-------~v~f~~sGseAve~AlklAr~~~~~~-g~~~-r~~ii~~~~~yHG~t~~a~s~~ 165 (460)
T PRK06541 95 PPAIELAERLAALAPGDLN-------RVFFTTGGSEAVESAWKLAKQYFKLT-GKPG-KHKVISRAIAYHGTTQGALAIT 165 (460)
T ss_pred HHHHHHHHHHHHhCCCCcC-------EEEEcCCcHHHHHHHHHHHHHHHHhc-CCCC-ccEEEEEcCcccCcchhhhcCc
Confidence 3444566777777532211 57899999999999999999753211 1111 2334445555664443333332
Q ss_pred CCC---------CCCeEEEecCCCCC---cccC--------HHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC----
Q 048643 212 GID---------LKNFRAIKTTKSSS---YGLS--------PDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP---- 267 (506)
Q Consensus 212 G~g---------~~~v~~v~~~~~~~---~~~d--------~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp---- 267 (506)
|.. ...+..+|....-. +.-+ ++.|++.+... ....+.+|++.-.....|.+-|
T Consensus 166 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~~~~~Aavi~EPv~g~~G~~~~~~~y 243 (460)
T PRK06541 166 GLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAFGRWAADRIEEAIEFE--GPDTVAAVFLEPVQNAGGCFPPPPGY 243 (460)
T ss_pred CChhhccccCCCCCCcEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhc--CCCCEEEEEECCccCCCCCccCCHHH
Confidence 221 11244454321000 1112 35666666532 1233555666555677788877
Q ss_pred hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCC-cceEEEEeCchhHHhhhcCCc-c
Q 048643 268 LKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTL-DCCCLWVKDPSALVSSLSTNP-E 345 (506)
Q Consensus 268 l~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~-~~g~~~~r~~~~l~~~~~~~~-~ 345 (506)
+++|.++|++||+.+++|.++.|+......+.....++ ..|.++ .-|.++..+ +.|.++++++. ...+.... .
T Consensus 244 l~~l~~lc~~~g~llI~DEV~tGfGR~G~~~a~~~~gv-~PDivt--~gK~l~~G~~pigav~~~~~i--~~~~~~~~~~ 318 (460)
T PRK06541 244 FERVREICDRYDVLLVSDEVICAFGRLGEMFGCERFGY-VPDIIT--CAKGITSGYSPLGAMIASDRL--FEPFLDGPTM 318 (460)
T ss_pred HHHHHHHHHHcCCEEEEechhhCCCcCchhhhhhhcCC-CCCEEE--ecccccCCccceeEEEEcHHH--HHHhhcCCCc
Confidence 99999999999999999999965533222211111234 468776 469888655 67888776542 22332111 1
Q ss_pred ccCCccccCCCccCCCCccccCCCCCCchHH---HHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc-------c-
Q 048643 346 YLKNKATESKQVVDYKDWQITLSRRFRSLKL---WLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS-------P- 414 (506)
Q Consensus 346 yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~---~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~-------p- 414 (506)
++. ..+-...++.+ ..+|+.+..+ ++.++..++.++|.+.|+++..+. .
T Consensus 319 ~~~-----------------~~T~~gnp~~~aaala~l~~l~~~---~~~~~~~~~g~~l~~~L~~l~~~~~v~~vrg~G 378 (460)
T PRK06541 319 FLH-----------------GYTFGGHPVSAAVALANLDIFERE---GLLDHVRDNEPAFRATLEKLLDLPIVGDVRGDG 378 (460)
T ss_pred ccc-----------------CCCCCCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecc
Confidence 110 01111223333 3344444333 345677788888888887753221 1
Q ss_pred ceEEEeecCCCcccccccccchHHHHH-HHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHH
Q 048643 415 SAVMDKLKPKYENCHSQQLVTEEEAIN-EFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQE 493 (506)
Q Consensus 415 ~~v~f~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~ 493 (506)
.++.+.+...... ..+......+ .....+.+.+.++|.+ +.+. ..|..++|++. ....|++||++++++|++
T Consensus 379 l~~~ie~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~~Gi~-~~~~-~~g~~~lrl~P-pl~~t~~~id~~~~~l~~ 451 (460)
T PRK06541 379 YFYGIELVKDKAT----KETFTDDESERLLRGFLSPALFEAGLY-CRAD-DRGDPVVQLAP-PLISGQEEFDEIEQILRS 451 (460)
T ss_pred eEEEEEEecCccc----ccCCcchhhhhhHHHHHHHHHHhCCeE-EEec-CCCCCEEEEEC-CCCCCHHHHHHHHHHHHH
Confidence 3444444221000 0000000011 1224677788888864 4432 23456899988 356788899999999999
Q ss_pred HHHHHHc
Q 048643 494 QLEAFLT 500 (506)
Q Consensus 494 ~~~~l~~ 500 (506)
+.+++.+
T Consensus 452 ~l~~~~~ 458 (460)
T PRK06541 452 VLTEAWA 458 (460)
T ss_pred HHHHHHh
Confidence 9887654
No 313
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.38 E-value=3e-10 Score=112.73 Aligned_cols=292 Identities=15% Similarity=0.101 Sum_probs=178.0
Q ss_pred HHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHh-
Q 048643 133 LENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIV- 211 (506)
Q Consensus 133 lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~- 211 (506)
.-.++.++|+++.+ ..+ ..+|.+||+|||-.|+..||.+...+ + +..+|.+...-|-...-+....
T Consensus 85 ~~~~la~~L~~~s~-~~d-------~vff~NSGaEA~EaAiKlARk~~~~~---~--k~~Iia~~nsFHGRT~galS~t~ 151 (404)
T COG4992 85 PQAELAEKLVELSP-FAD-------RVFFCNSGAEANEAALKLARKYTGDP---E--KSKIIAFENSFHGRTLGALSATG 151 (404)
T ss_pred HHHHHHHHHHhhCc-ccc-------EEEEcCCcHHHHHHHHHHHHHHcCCC---C--CcEEEEEcCCcCCccceeeeccC
Confidence 33445577888876 222 67999999999999999999875300 0 2234445555552211111111
Q ss_pred ------CCC--CCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC----hhHHHHHHHHhC
Q 048643 212 ------GID--LKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP----LKPLCDVAKQFG 279 (506)
Q Consensus 212 ------G~g--~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp----l~~I~~ia~~~g 279 (506)
+++ ...++.||.+ |+++|+++|+++++ .|++.--.-..|.+-| ++++.++|++||
T Consensus 152 ~~ky~~~F~Pl~~g~~~vpfn-------Di~al~~ai~~~ta------AvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g 218 (404)
T COG4992 152 QPKYRKGFGPLLPGFRHVPFN-------DIEALEAAIDEDTA------AVIVEPIQGEGGVIPAPPEFLKALRELCDEHG 218 (404)
T ss_pred ChhhccCCCCCCCCceecCCC-------CHHHHHHHhccCeE------EEEEecccCCCCCCCCCHHHHHHHHHHHHHhC
Confidence 111 1245667653 89999999999764 5555544444565533 899999999999
Q ss_pred CEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccC
Q 048643 280 IWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVD 359 (506)
Q Consensus 280 ~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 359 (506)
+.++.|..+.|...--.-+.....|+ .-|.+++ -|.|+..++.|.++.++ .. ...+... . ++
T Consensus 219 ~LLI~DEVQtG~GRTGk~fA~e~~gV-~PDI~tl--aK~LgGG~PigA~la~~-~~-~~~~~~G---~-------Hg--- 280 (404)
T COG4992 219 ALLILDEVQTGLGRTGKLFAYEHYGV-EPDILTL--AKALGGGFPIGAMLATE-EI-ASAFTPG---D-------HG--- 280 (404)
T ss_pred eEEEEeccccCCCccchHHHHHHhCC-CCCEEEe--eccccCCccceeeEEch-hh-hhcCCCC---c-------cc---
Confidence 99999999987643222222222233 5788776 49998778899998873 21 1222110 0 00
Q ss_pred CCCccccCCCCCCchHHH---HHHHHhchhHHHHHHHHHHHHHHHHHHHHHcC----CCCc--c---ceEEEeecCCCcc
Q 048643 360 YKDWQITLSRRFRSLKLW---LVIRNYGVANLRHFLRSHVNMAKLFERLVASD----KRVS--P---SAVMDKLKPKYEN 427 (506)
Q Consensus 360 ~~~~~~~~sr~~~al~~~---~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~----~~~~--p---~~v~f~~~~~~~~ 427 (506)
-| -++ .+|+.- +++..+-.++ .+++..++..+|.++|+++ |-++ - -++-..+.++
T Consensus 281 ---ST-fGG---NpLacAv~~a~l~~l~~e~---ll~~v~~~g~~~~~~L~~l~~~~~~v~~vRG~GLmiGiel~~~--- 347 (404)
T COG4992 281 ---ST-FGG---NPLACAVALAVLEVLLEEG---LLENVREKGEYLLQRLRELKRRYPLVKEVRGRGLMIGIELKEP--- 347 (404)
T ss_pred ---CC-CCc---CHHHHHHHHHHHHHHcchh---HHHHHHHHHHHHHHHHHHHhhcCCceeeeecceeEEEEEecCc---
Confidence 01 111 334333 3444444444 5566667788888888764 2122 1 3333444332
Q ss_pred cccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHc
Q 048643 428 CHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAFLT 500 (506)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l~~ 500 (506)
.....+.+.+.++|...+.. +..++|+.. ....++|+|+..+++|+++.+.+..
T Consensus 348 --------------~~a~~~~~~~~~~gvL~~~a----~~~ViR~~P-pL~i~~eei~~~~~~l~~~l~~~~~ 401 (404)
T COG4992 348 --------------YRARDIVRALREEGVLVLPA----GPNVIRFLP-PLVITEEEIDEALDALERALAAASA 401 (404)
T ss_pred --------------ccHHHHHHHHHHCCeEEecC----CCCeEEecC-CccCCHHHHHHHHHHHHHHHHHhhh
Confidence 02456777888889754332 345899988 5778999999999999999876643
No 314
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.37 E-value=2.1e-09 Score=112.19 Aligned_cols=311 Identities=11% Similarity=0.024 Sum_probs=174.1
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHH
Q 048643 131 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQI 210 (506)
Q Consensus 131 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~ 210 (506)
+..+.++.+.|++++.-+.. ...+|+++||+||..|+..||... | ++.+|......|-...-+..+
T Consensus 96 ~~~~~~lAe~L~~~~p~~~~------~~v~f~~SGsEA~e~AlklAr~~t-------g-r~~Ii~~~~~yHG~t~~~ls~ 161 (441)
T PRK05769 96 YEPAVELAERLVEIAPGGFE------KKVFFTNSGTESNEAAIKIARYHT-------G-RKYIIAFLGAFHGRTYGSLSL 161 (441)
T ss_pred CHHHHHHHHHHHHhCCCCCC------CEEEECCchHHHHHHHHHHHHHHh-------C-CCeEEEECCCcCCccHHHHHh
Confidence 44556677888888642111 157899999999999999999752 1 233444455556444333333
Q ss_pred hCC----------CCCCeEEEecCCCCCcc---cC--------HHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC--
Q 048643 211 VGI----------DLKNFRAIKTTKSSSYG---LS--------PDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP-- 267 (506)
Q Consensus 211 ~G~----------g~~~v~~v~~~~~~~~~---~d--------~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp-- 267 (506)
.|. ....+..+|....-.+. -+ ++.|++.+.+....+..+.+|++.-.....|.+-|
T Consensus 162 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~ 241 (441)
T PRK05769 162 TASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGNAVLDFIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPK 241 (441)
T ss_pred cCCCcccccCCCCCCCCeEEeCCCccccccccCCchHHHHHHHHHHHHHHHHhhccCCCceEEEEECcccCCCCCcCCCH
Confidence 221 01234555542100000 11 23345433221111234556666655666788877
Q ss_pred --hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCcc
Q 048643 268 --LKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPE 345 (506)
Q Consensus 268 --l~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~ 345 (506)
+++|.++|++||+++++|.++.|+.....-+.....++ ..|.+++ -|.++..++.|+++.++.- . ..+. .
T Consensus 242 ~~l~~l~~l~~~~g~lli~DEv~tG~gr~G~~~a~~~~gv-~pDivt~--~K~l~~G~p~gav~~~~~i-~-~~~~---~ 313 (441)
T PRK05769 242 NFFKELRKLADKYGILLIDDEVQTGMGRTGKMFAIEHFGV-EPDIITL--AKAIAGGLPLGAVIGRAEL-M-FLPP---G 313 (441)
T ss_pred HHHHHHHHHHHHcCCEEEEechhhCCCcccceehhhccCC-CCCEEEE--cccccCCcccEEEEEehhh-h-hcCC---C
Confidence 99999999999999999999986433221111111133 4587775 4888766778888776542 1 1111 0
Q ss_pred ccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcC----CCCc-c----ce
Q 048643 346 YLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASD----KRVS-P----SA 416 (506)
Q Consensus 346 yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~----~~~~-p----~~ 416 (506)
... .+.. +.+........+|+.+.. +..++..++.++|++.|+++ +-+. . .+
T Consensus 314 ~~~--------------~T~~-g~p~~~aaa~a~L~~l~~----~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G~~ 374 (441)
T PRK05769 314 SHA--------------NTFG-GNPVAAAAALATLEELEE----GLLENAQKLGEYLRKELKELKEKYEFIGDVRGLGLM 374 (441)
T ss_pred CCC--------------CCCC-cCHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhCCCeeeeecceEE
Confidence 000 0111 111122333444444422 55677777888888888653 2221 1 34
Q ss_pred EEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 048643 417 VMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLE 496 (506)
Q Consensus 417 v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~ 496 (506)
+.+.+..... + ........+.+.+.++|.+ +.+ .+...+|++. ....|++||++++++++++..
T Consensus 375 ~~i~~~~~~~---------~--~~~~~~~~~~~~~~~~Gil-~~~---~~~~~lr~~p-~l~~t~~~id~~~~~l~~~l~ 438 (441)
T PRK05769 375 IGVELVKDRK---------E--PDPKLRDKVLYEAFKRGLL-LLG---AGKSAIRIIP-PLIITEEEADIGLEILEEAIK 438 (441)
T ss_pred EEEEeccCCc---------c--ccHHHHHHHHHHHHhCCcE-Eec---CCCCEEEEeC-CCCCCHHHHHHHHHHHHHHHH
Confidence 4444432200 0 0023456677788888974 332 2446799987 456788899999999999876
Q ss_pred HH
Q 048643 497 AF 498 (506)
Q Consensus 497 ~l 498 (506)
++
T Consensus 439 ~~ 440 (441)
T PRK05769 439 EL 440 (441)
T ss_pred Hh
Confidence 54
No 315
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.36 E-value=1.8e-10 Score=114.70 Aligned_cols=217 Identities=17% Similarity=0.177 Sum_probs=150.3
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCc----h
Q 048643 127 SPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTH----C 202 (506)
Q Consensus 127 ~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H----~ 202 (506)
.|....+|. .++.+-|.+ ..+.+++|..|...++..... .+..|+++...+ .
T Consensus 76 nPt~~~le~----~iaal~ga~---------~~l~fsSGmaA~~~al~~L~~-----------~g~~iV~~~~~Y~gT~~ 131 (409)
T KOG0053|consen 76 NPTRDVLES----GIAALEGAA---------HALLFSSGMAAITVALLHLLP-----------AGDHIVATGDVYGGTLR 131 (409)
T ss_pred CCchHHHHH----HHHHHhCCc---------eEEEecccHHHHHHHHHHhcC-----------CCCcEEEeCCCcccHHH
Confidence 455555664 478887775 357777777677666655442 333344444433 4
Q ss_pred HHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEE
Q 048643 203 ALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWV 282 (506)
Q Consensus 203 s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~l 282 (506)
-+.+....+|+ ....+.++ |++.+++++++.++ +|.+..++|+++.+-||++|+++|+++|+.+
T Consensus 132 ~l~~~~~~~gi---e~~~vd~~-------~~~~~~~~i~~~t~------~V~~ESPsNPll~v~DI~~l~~la~~~g~~v 195 (409)
T KOG0053|consen 132 ILRKFLPKFGG---EGDFVDVD-------DLKKILKAIKENTK------AVFLESPSNPLLKVPDIEKLARLAHKYGFLV 195 (409)
T ss_pred HHHHHHHHhCc---eeeeechh-------hHHHHHHhhccCce------EEEEECCCCCccccccHHHHHHHHhhCCCEE
Confidence 45566677888 77777654 67788888887544 8999999999999999999999999999999
Q ss_pred EeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCc--ceEEEEeCchhHHhhhcCCccccCCccccCCCccCC
Q 048643 283 HVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLD--CCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDY 360 (506)
Q Consensus 283 hVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~ 360 (506)
+||..++++...-+ +.. +||.++-+..||++..-. .|.+..+..+...+ +.....++
T Consensus 196 vVDnTf~~p~~~~p-L~l------GADIV~hSaTKyi~Ghsdvi~G~iv~n~~~~~~~-l~~~~~~l------------- 254 (409)
T KOG0053|consen 196 VVDNTFGSPYNQDP-LPL------GADIVVHSATKYIGGHSDVIGGSVVLNSEELASR-LKFLQEDL------------- 254 (409)
T ss_pred EEeCCcCcccccCh-hhc------CCCEEEEeeeeeecCCcceeeeEEecCcHHHHHH-HHHHHHHh-------------
Confidence 99999988744322 221 699999999999986533 45555553433222 21111122
Q ss_pred CCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc
Q 048643 361 KDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS 413 (506)
Q Consensus 361 ~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~ 413 (506)
+.-..++.+|..+| |.+-+.-+++++.++|..+++.|++.|.++
T Consensus 255 -------g~~~~p~~~~ll~R--glktl~lRi~~~~ena~~~A~~Le~~~~v~ 298 (409)
T KOG0053|consen 255 -------GWCEDPFDLFLLSR--GLKTLHLRINKHSENALKIALLLEAHPKVK 298 (409)
T ss_pred -------cCCCCHHHHHHHhc--CcchhhhhHHHHHHHHHHHHHHhhhCCcee
Confidence 22235677777777 456666788999999999999999887765
No 316
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.36 E-value=3.5e-09 Score=110.59 Aligned_cols=318 Identities=14% Similarity=0.078 Sum_probs=177.8
Q ss_pred HHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHh
Q 048643 132 ELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIV 211 (506)
Q Consensus 132 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~ 211 (506)
+.+.++.+.|+++++...+ ..+|+++||+|+..|+..||... + ++.++-.....|-...-+....
T Consensus 84 ~~~~~la~~L~~~~p~~~~-------~v~f~~sGsEAve~AlklAr~~t-------g-r~~ii~~~~~yHG~t~~a~s~~ 148 (443)
T PRK08360 84 VEPLLLAEKLIEIAPGDNP-------KVSFGLSGSDANDGAIKFARAYT-------K-RRKILSYLRSYYGSTYGAMSLT 148 (443)
T ss_pred HHHHHHHHHHHHhCCCCCC-------EEEEcCCHHHHHHHHHHHHHHhc-------C-CCeEEEEeCCcCCcCHHHHHhc
Confidence 4445666778888654322 57999999999999999998752 1 2223333444554333333333
Q ss_pred CCC---------CCCeEEEecCCCCC--cc--------cCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC----h
Q 048643 212 GID---------LKNFRAIKTTKSSS--YG--------LSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP----L 268 (506)
Q Consensus 212 G~g---------~~~v~~v~~~~~~~--~~--------~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp----l 268 (506)
|.. ...+..+|...... +. -+++.++++++... .+..+.+|++.-..+++|.+-| +
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~iAAvi~eP~~~~~G~~~~~~~~l 227 (443)
T PRK08360 149 GLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKFEGEV-YAEGVAALFAEPIQGDAGMIVPPEDYF 227 (443)
T ss_pred CCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHHHHHHHHHHhcc-CCCCeEEEEECCccCCCCCcCCCHHHH
Confidence 321 12345555432100 00 12344555554321 1234566676655677887754 8
Q ss_pred hHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccC
Q 048643 269 KPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLK 348 (506)
Q Consensus 269 ~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~ 348 (506)
++|.++|++||+++++|.+|.++......+.....++ .-|.+++ -|.++..+..|+++.+.. +.+.+... .+.
T Consensus 228 ~~l~~l~~~~g~llI~DEv~~g~gr~G~~~a~~~~~~-~pDiitl--sK~l~~G~pigav~~~~~--i~~~~~~~-~~~- 300 (443)
T PRK08360 228 KKLKKILDEHGILLVVDEVQSGLGRTGKWFAIEHFGV-EPDIITL--GKPLGGGLPISATIGRAE--IMDSLPPL-AHA- 300 (443)
T ss_pred HHHHHHHHHcCCEEEEeccccCCCcCccchhhhhcCC-CCCEEEe--cccccCCceeEEEEEcHH--HHhhhcCC-CCC-
Confidence 9999999999999999999987533221111111233 3576665 799986677888877632 22333210 010
Q ss_pred CccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcC----CCCc---c--ceEEE
Q 048643 349 NKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASD----KRVS---P--SAVMD 419 (506)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~----~~~~---p--~~v~f 419 (506)
.+.. +.+.....+..+|+.+..+. ++++..++.++|.+.|+++ |.+. . .++.+
T Consensus 301 --------------~T~~-~~p~~~aaa~a~l~~l~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrg~Gl~~gi 362 (443)
T PRK08360 301 --------------FTLS-GNPVASAAALAVIEEIEEKN---LLKRAEKLGNYTKKRLEEMKKKHELIGDVRGIGLMIGV 362 (443)
T ss_pred --------------CCCC-cCHHHHHHHHHHHHHHHHcC---HHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEE
Confidence 0111 11112233445555553333 4566666777777777543 3222 1 33444
Q ss_pred eecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 048643 420 KLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAFL 499 (506)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l~ 499 (506)
.+..... .... .......+.+++.+.|.+ +.+. +...+|++. ....|++||++++++++++.+++.
T Consensus 363 e~~~~~~-------~~~~--~~~~~~~~~~~l~~~Gi~-~~~~---~~~~lr~~P-~l~~t~~~id~~~~~l~~~l~~~~ 428 (443)
T PRK08360 363 DLVKDRE-------TKER--AYEEAAKVVWRAWELGLI-VTFF---SGNVLRIQP-PLTIEKEVLDEGLDILEEAIEDVE 428 (443)
T ss_pred EEecCCc-------ccCc--cHHHHHHHHHHHHHCCeE-Eeec---CCCEEEEeC-CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 4432100 0000 012345677788888864 4321 236799987 467788999999999999998886
Q ss_pred ccCCC
Q 048643 500 TTNTP 504 (506)
Q Consensus 500 ~~~~~ 504 (506)
+-..|
T Consensus 429 ~~~~~ 433 (443)
T PRK08360 429 EGKVP 433 (443)
T ss_pred hccCC
Confidence 55443
No 317
>PRK06105 aminotransferase; Provisional
Probab=99.34 E-value=2.8e-09 Score=111.88 Aligned_cols=326 Identities=10% Similarity=0.033 Sum_probs=178.2
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHH
Q 048643 131 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQI 210 (506)
Q Consensus 131 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~ 210 (506)
...+.++.+.|++++.-+.+ ..+|+++||+||..|+..||.....+ +..+ +..+|......|-...-+..+
T Consensus 91 ~~~~~~lae~L~~~~p~~~~-------~v~f~~SGseAve~AlKlar~~~~~~-g~t~-r~~il~~~~~yHG~t~~a~s~ 161 (460)
T PRK06105 91 HGPVIDLAEKLVAMAPVPMS-------KVFFTNSGSEANDTVVKLVWYYNNAL-GRPE-KKKIISRQRGYHGVTIASASL 161 (460)
T ss_pred CHHHHHHHHHHHHhCCCCCC-------EEEEeCCcHHHHHHHHHHHHHHHHhc-CCCC-CcEEEEecCccCCcchhheec
Confidence 44555666778887643222 57899999999999999998643111 1111 234455555566544333322
Q ss_pred hCC---------CCCCeEEEecCCCCCc----c-------cCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC---
Q 048643 211 VGI---------DLKNFRAIKTTKSSSY----G-------LSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP--- 267 (506)
Q Consensus 211 ~G~---------g~~~v~~v~~~~~~~~----~-------~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp--- 267 (506)
.|. ....+..+|......+ . -..++|++.+... ....+..|++.-.....|.+-|
T Consensus 162 t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~~~~~--~~~~iAavIvEPiqg~gG~~~~~~~ 239 (460)
T PRK06105 162 TGLPNNHRSFDLPLDRILHTGCPHYYRFGLPGESEEAFATRLANELEALILAE--GPDTIAAFIGEPVMGAGGVIVPPKT 239 (460)
T ss_pred cCCcccccccCCCCCCCEEcCCCcccccccCCCChHHHHHHHHHHHHHHHHHc--CCCceEEEEEccccCCCCCccCCHH
Confidence 221 1112334433210000 0 1235667666431 1234556666655556677766
Q ss_pred -hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCC-CcceEEEEeCchhHHhhhcCCcc
Q 048643 268 -LKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSALVSSLSTNPE 345 (506)
Q Consensus 268 -l~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~ 345 (506)
+++|.++|++||+.+++|+++.|+.....-+.....++ ..|.+++ -|.++.. ++.|+++.++. +...+.....
T Consensus 240 yl~~lr~lc~~~~~llI~DEv~tG~GRtG~~f~~~~~~v-~PDi~~~--gK~lggG~~P~~av~~~~~--i~~~~~~~~~ 314 (460)
T PRK06105 240 YWEKIQAVLRKYDILLVADEVICGFGRTGNMFGCETFGI-KPDILVM--SKQLSSSYQPLSAVLMNEK--VYDPIADESG 314 (460)
T ss_pred HHHHHHHHHHHcCCeEEEeccccCCCcCchhhhHHhcCC-CCCeeee--ecccccCcccceEEEEcHH--HHHHHhcccc
Confidence 99999999999999999999966644332222222344 4787776 4888755 35778877643 2233322110
Q ss_pred ccCCccccCCCccCCCCccccCCCCCCch---HHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc----c----
Q 048643 346 YLKNKATESKQVVDYKDWQITLSRRFRSL---KLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS----P---- 414 (506)
Q Consensus 346 yl~~~~~~~~~~~~~~~~~~~~sr~~~al---~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~----p---- 414 (506)
... .+....+-...++ ....+|..+-.+ +++++..++.++|.+.|+++..+. .
T Consensus 315 ~~~-------------~~~h~~T~~gnpl~~aaa~a~L~~i~~~---~l~~~v~~~g~~l~~~L~~l~~~~~v~~vrG~G 378 (460)
T PRK06105 315 KIG-------------TFGHGFTASGHPVAAAVALENLAIIEER---DLVGNAAERGARLQARLRALADHPLVGEVRGVG 378 (460)
T ss_pred cCc-------------ccccCCCCCCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecc
Confidence 000 0000011112333 334455555333 456777778888888887653222 1
Q ss_pred ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHH
Q 048643 415 SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQ 494 (506)
Q Consensus 415 ~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~ 494 (506)
.+..+.+.+.... + .+.. .......++...+.++|.+. .+. + ..+|++. ....|++||+++++.+.++
T Consensus 379 l~~gie~~~~~~~---~-~~~~--~~~~~a~~i~~~~~~~Gvl~-~~~---g-~~i~l~P-pl~it~~eid~~~~~l~~~ 446 (460)
T PRK06105 379 LIAAVELVADKAT---K-TPFE--PPGKVGARANAAAHEHGVIS-RAM---G-DTLAFCP-PLIITAAQVDEMVDRFGRA 446 (460)
T ss_pred eEEEEEEecCccc---C-CCCC--chhHHHHHHHHHHHHCCeEE-Eec---C-CEEEEEC-CCccCHHHHHHHHHHHHHH
Confidence 3344444321000 0 0000 00123456777888888743 332 2 4789886 3456889999999999998
Q ss_pred HHHHHc
Q 048643 495 LEAFLT 500 (506)
Q Consensus 495 ~~~l~~ 500 (506)
.+++.+
T Consensus 447 l~~~~~ 452 (460)
T PRK06105 447 LDDVAA 452 (460)
T ss_pred HHHHHH
Confidence 887754
No 318
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.34 E-value=3.9e-09 Score=110.25 Aligned_cols=320 Identities=14% Similarity=0.126 Sum_probs=172.7
Q ss_pred HHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHh
Q 048643 132 ELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIV 211 (506)
Q Consensus 132 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~ 211 (506)
+.+.++.+.|++++.-+.+ ..+|+++||+|+..|+..||.....+ +..+ +..+|......|-...-+....
T Consensus 92 ~~~~~la~~L~~~~p~~~~-------~v~f~~sGseAve~AlklAr~~~~~~-g~~~-r~~ii~~~~~yHG~t~gals~~ 162 (445)
T PRK09221 92 PLAFELAERLAELAPGGLD-------HVFFTNSGSESVDTALKIALAYHRAR-GQGT-RTRLIGRERGYHGVGFGGISVG 162 (445)
T ss_pred HHHHHHHHHHHHhCCCCCC-------EEEEeCCcHHHHHHHHHHHHHHHHhc-CCCC-CcEEEEECCCcCccchhhhccC
Confidence 3444566778887632211 57899999999999999999764221 1111 2234445555563322222222
Q ss_pred CC-------C--CCCeEEEecCC-CCC--cc--------cCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC----
Q 048643 212 GI-------D--LKNFRAIKTTK-SSS--YG--------LSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP---- 267 (506)
Q Consensus 212 G~-------g--~~~v~~v~~~~-~~~--~~--------~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp---- 267 (506)
|. + ...+..+|... ... +. -..++|++.++.. ....+.+|++.-.....|.+-|
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~--~~~~iAavi~Epv~g~~G~~~~~~~y 240 (445)
T PRK09221 163 GIVNNRKMFGGLLPGVDHLPHTLDLPENAFSKGQPEHGAELADDLERLVALH--DASTIAAVIVEPMAGSAGVLVPPKGY 240 (445)
T ss_pred CChhhhhccCCCCCCCeEeCCCccccccccCCChHHHHHHHHHHHHHHHHhc--CCCcEEEEEEecccCCCCcccCCHHH
Confidence 21 0 01234444321 000 00 1135667666532 1134556777666677788888
Q ss_pred hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCC-CcceEEEEeCchhHHhhhcCCccc
Q 048643 268 LKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSALVSSLSTNPEY 346 (506)
Q Consensus 268 l~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~y 346 (506)
+++|.++|++||+++++|+++.|+......+.....++ ..|.+++ -|.++.. ++.|++++++. . .+.+...+.+
T Consensus 241 l~~l~~lc~~~g~llI~DEV~tG~GRtG~~~~~~~~gv-~PDi~~~--gK~l~gG~~Pi~av~~~~~-i-~~~~~~~~~~ 315 (445)
T PRK09221 241 LQRLREICDKHGILLIFDEVITGFGRLGAAFAAERFGV-TPDIITF--AKGLTNGAIPMGAVIASDE-I-YDAFMQGPEY 315 (445)
T ss_pred HHHHHHHHHHcCCEEEEeehhhCCCcCchhhHHHhcCC-CCCEEEe--ccccccCcccceeeEEcHH-H-HHhhccCccc
Confidence 99999999999999999999976533221111111233 3577665 4777533 33566666543 2 2333221111
Q ss_pred cCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCC---c-c----ceEE
Q 048643 347 LKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRV---S-P----SAVM 418 (506)
Q Consensus 347 l~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~---~-p----~~v~ 418 (506)
.... ....|.. +.+........+|+.+-.+ +++++..++.++|++.|+++.++ . . .+..
T Consensus 316 ~~~~---------~~~~T~~-~~pl~~aaa~a~L~~i~~~---~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrg~Gl~~~ 382 (445)
T PRK09221 316 AIEF---------FHGYTYS-AHPVACAAGLATLDIYREE---DLFERAAELAPYFEDAVHSLKGLPHVIDIRNIGLVAG 382 (445)
T ss_pred cccc---------ccccCCC-cCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHhhccCCCEEEEecCceEEE
Confidence 1000 0001111 1111222233445555333 35678888999999988876332 1 1 2222
Q ss_pred EeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 048643 419 DKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAF 498 (506)
Q Consensus 419 f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l 498 (506)
+.+.+... .. .....++.+++.++|.. +.. .+ ..+|++. ....|++||+++++.|+++.+++
T Consensus 383 v~~~~~~~---------~~---~~~~~~~~~~~~~~Gv~-~~~---~~-~~lr~~P-pl~~t~~eid~~~~~l~~~l~~~ 444 (445)
T PRK09221 383 IELAPRPG---------AP---GARGYEAFMKCFEKGLL-VRY---TG-DTIALSP-PLIIEKAQIDELVDALGDALRAV 444 (445)
T ss_pred EEEecccc---------cc---cchHHHHHHHHHHCCeE-Eee---cC-CEEEEEC-CccCCHHHHHHHHHHHHHHHHhh
Confidence 33322100 00 11234677778888864 332 12 4799987 46678899999999999988664
No 319
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.34 E-value=2e-09 Score=111.63 Aligned_cols=308 Identities=11% Similarity=0.043 Sum_probs=170.2
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCCcEEE-cCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHH
Q 048643 131 TELENIVMDWLGQMLKLPKSFLFSGNGGGVI-QGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQ 209 (506)
Q Consensus 131 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~-t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~ 209 (506)
++...++.+.|++++..|... ....+| +++||+||..|+..||... + ++.+|......|=...-+..
T Consensus 77 ~~~~~~lae~l~~~~~~~~~~----~~~~~f~~~sGseA~e~AlklAr~~t-------g-r~~ii~~~~~yHG~t~~als 144 (412)
T TIGR02407 77 TEAKREFLETFNEIILKPRGL----DYKVQFPGPTGTNAVESALKLARKVT-------G-RSNVVSFTNAFHGMTLGSLS 144 (412)
T ss_pred cHHHHHHHHHHHHhccCccCC----CceEEEeCCCchHHHHHHHHHHhhhc-------C-CCeEEEECCCcCCchHHHHH
Confidence 455556677787775333211 002345 5899999999999999751 1 22344445556644333333
Q ss_pred HhCC---------CCCCeEEEecCCCCCc-ccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc----cChhHHHHHH
Q 048643 210 IVGI---------DLKNFRAIKTTKSSSY-GLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV----DPLKPLCDVA 275 (506)
Q Consensus 210 ~~G~---------g~~~v~~v~~~~~~~~-~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i----dpl~~I~~ia 275 (506)
..|. ....+..+|.....+. .-+++.+++.+.+.......+.+|++.-.....|.+ +-+++|.++|
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc 224 (412)
T TIGR02407 145 VTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLC 224 (412)
T ss_pred hcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHHHHhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHH
Confidence 3221 1124455554311000 124777888886432111234556655444556664 3489999999
Q ss_pred HHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCC-CCcceEEEEeCchhHHhhhcCCccccCCccccC
Q 048643 276 KQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFT-TLDCCCLWVKDPSALVSSLSTNPEYLKNKATES 354 (506)
Q Consensus 276 ~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~-p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~ 354 (506)
++||+++++|+++.|+......+.....++ ..|.++++ |+++. .+..|++++++.. ..+.. ....
T Consensus 225 ~~~g~llI~DEV~tG~GRtG~~~a~~~~~v-~PDi~~~~--K~lg~~G~pigav~~~~~~---~~~~~--~~~~------ 290 (412)
T TIGR02407 225 RRHDILLIVDDIQAGCGRTGTFFSFEPAGI-EPDIVCLS--KSISGYGLPLALTLIKPEL---DVWKP--GEHN------ 290 (412)
T ss_pred HHcCCEEEEechhhCCCccchhHHhcccCC-CCCEEEec--hhccCCccceeEEEEchhh---hccCC--CccC------
Confidence 999999999999986533211111111233 57877764 99986 7789999987542 22210 0000
Q ss_pred CCccCCCCccccCCCCCCchHHHHHHHH-hchhHHHHHHHHHHHHHHHHHHHHHc----CCCCc---c---ceEEEeecC
Q 048643 355 KQVVDYKDWQITLSRRFRSLKLWLVIRN-YGVANLRHFLRSHVNMAKLFERLVAS----DKRVS---P---SAVMDKLKP 423 (506)
Q Consensus 355 ~~~~~~~~~~~~~sr~~~al~~~~~l~~-~G~~g~~~~i~~~~~~a~~l~~~l~~----~~~~~---p---~~v~f~~~~ 423 (506)
.+. .+.........+++.. +..+. ..++..++.++|.++|++ .+.+. + .++.+.+.+
T Consensus 291 --------~T~-~gnpl~~aaa~a~l~~~i~~~~---l~~~~~~~g~~l~~~l~~l~~~~~~~~~~vrg~Gl~~~l~l~~ 358 (412)
T TIGR02407 291 --------GTF-RGNNLAFVTATAALEYYWSDDA---FEKAVQRKSEIIQERLDRIVAEYPELIKQVRGRGLMQGIECGD 358 (412)
T ss_pred --------CCC-CccHHHHHHHHHHHHHHhcccH---HHHHHHHHHHHHHHHHHHHHhhCCCceEeeecceeEEEEEecC
Confidence 011 0111111133455553 43333 344455556666665543 44322 2 334444432
Q ss_pred CCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 048643 424 KYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLE 496 (506)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~ 496 (506)
.....++.+.+.++|++ +.+... +...+|++. ....+++||+++++.|++..+
T Consensus 359 -----------------~~~~~~~~~~~~~~Gv~-v~~~~~-~~~~lr~~p-~l~~t~~~i~~~~~~l~~~l~ 411 (412)
T TIGR02407 359 -----------------GDLAGKIAKAAFENGLI-IETSGP-NDEVIKLLP-PLTIDEETLQQGLDILEQAVE 411 (412)
T ss_pred -----------------hHHHHHHHHHHHHCCCE-EeccCC-CCCEEEEEC-CCCCCHHHHHHHHHHHHHHHh
Confidence 12346778888888975 433211 235799988 567888899999999998764
No 320
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.33 E-value=3.5e-09 Score=108.15 Aligned_cols=315 Identities=11% Similarity=-0.002 Sum_probs=192.5
Q ss_pred HHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHh
Q 048643 132 ELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIV 211 (506)
Q Consensus 132 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~ 211 (506)
+...++.+.|.+++.-+.. .-.+|+++||+||-.|+..||...- ...+|-.....|-...-++.+.
T Consensus 99 e~~v~~ae~L~~~~p~~~~------~~~~f~~sGaeA~E~AiKiAr~~Tg--------r~~viaf~~afHG~T~galslT 164 (447)
T COG0160 99 EPYVELAEKLTALAPGSGL------KKVFFGNSGAEAVEAAIKIARAYTG--------RPGVIAFDGAFHGRTLGALSLT 164 (447)
T ss_pred hhHHHHHHHHHHhCCcccC------CeEEecCCcHHHHHHHHHHHHHHhC--------CCcEEEECCcccccchhhHHhc
Confidence 3344455666666543211 2579999999999999999998741 2234444556665544444433
Q ss_pred --------CCC--CCCeEEEecCCCCC----------cccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC----
Q 048643 212 --------GID--LKNFRAIKTTKSSS----------YGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP---- 267 (506)
Q Consensus 212 --------G~g--~~~v~~v~~~~~~~----------~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp---- 267 (506)
|.+ ...|+.+|....-. +.-..+.++..|.+....+..|.++++---....|.+.|
T Consensus 165 ~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~f 244 (447)
T COG0160 165 GSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGF 244 (447)
T ss_pred cCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHHHHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHH
Confidence 222 12477787643111 122344566666665555667888888777777888855
Q ss_pred hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCcccc
Q 048643 268 LKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYL 347 (506)
Q Consensus 268 l~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl 347 (506)
++++.++|++||+.+++|..+.|+...-.-+..--.|+ ..|.+|+. |.++...+.|.++.|..-. ... +.-.
T Consensus 245 l~~l~~~~~~~gillI~DEVQtG~GRTG~~fa~E~~gv-~PDivt~a--K~ig~G~Pl~avv~r~ei~--~~~---~g~~ 316 (447)
T COG0160 245 LKALRKLCREHGILLIADEVQTGFGRTGKMFAFEHFGV-EPDIVTLA--KSLGGGLPLSAVVGRAEIM--DWP---PGGH 316 (447)
T ss_pred HHHHHHHHHHcCCEEEEeccccCCCccccchhhhhcCC-CCCEEEec--ccccCCCceeEEeccHHhc--ccC---Cccc
Confidence 89999999999999999999988765443333333455 68998875 8888777788888774321 111 0000
Q ss_pred CCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCC-CCc----c----ceEE
Q 048643 348 KNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDK-RVS----P----SAVM 418 (506)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~-~~~----p----~~v~ 418 (506)
. ++ -.+.+..+....++|..+-.+ +++++..++-+++.++|.++. .+. . -++-
T Consensus 317 ~--------------~T-f~GNpva~Aaa~AvL~vie~e---~L~~~a~~~G~~l~~~L~~l~~~~~~IgdVRG~Glm~g 378 (447)
T COG0160 317 G--------------GT-FGGNPVACAAALAVLDVIEEE---NLLERAAELGEYLRDRLEELQEKHPLIGDVRGLGLMIG 378 (447)
T ss_pred C--------------CC-CCcCHHHHHHHHHHHHHHHHc---cHHHHHHHHHHHHHHHHHHHHhhcCceecccccceEEE
Confidence 0 01 122222333344445544344 567778888888888887531 121 1 2222
Q ss_pred EeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 048643 419 DKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAF 498 (506)
Q Consensus 419 f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l 498 (506)
..+..+. .+.+...+...++.+++.++|.+..+.... .+++|+.. ---.+++++|+.++.|+++.+++
T Consensus 379 iE~v~d~---------~t~~p~~~~~~~i~~~~~~~Glil~~~G~~--~nviRi~P-PL~is~e~~d~~l~il~~al~~~ 446 (447)
T COG0160 379 VELVKDR---------DTKEPDAELAAKIVARAFERGLLLLTCGPH--GNVLRILP-PLTISDEELDEGLDILEEALKEA 446 (447)
T ss_pred EEEecCC---------CCCCCCHHHHHHHHHHHHHcCCEEeccCCC--CcEEEEeC-CcccCHHHHHHHHHHHHHHHHhh
Confidence 2222110 000011356788889999999866555432 46899987 45568889999999999987654
No 321
>PRK05965 hypothetical protein; Provisional
Probab=99.33 E-value=8.1e-09 Score=108.34 Aligned_cols=330 Identities=13% Similarity=0.072 Sum_probs=181.2
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHH
Q 048643 131 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQI 210 (506)
Q Consensus 131 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~ 210 (506)
++.+.++.+.|++++.-+. ...+|+++||+|+-.||..||.....+ |..+ +..+|......|-...-+..+
T Consensus 89 ~~~~~~lae~L~~~~p~~~-------~~v~f~~sGSEAve~AlKlAr~~~~~~-g~~~-r~kii~~~~~YHG~t~~a~s~ 159 (459)
T PRK05965 89 SEPAIRLAAKLAERAPGSL-------NHVYFTLGGSDAVDSAVRFIRHYWNAT-GRPS-KKQFISLERGYHGSSSVGAGL 159 (459)
T ss_pred CHHHHHHHHHHHhhCCCCc-------CEEEEeCChhHHHHHHHHHHHHHHHhc-CCCC-ccEEEEecCCcCcccHHHHHh
Confidence 3444556677777753211 257899999999999999999864221 1111 223444555556433323232
Q ss_pred hCC-------C--CCCeEEEecCCCCC--cccC--------HHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC----
Q 048643 211 VGI-------D--LKNFRAIKTTKSSS--YGLS--------PDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP---- 267 (506)
Q Consensus 211 ~G~-------g--~~~v~~v~~~~~~~--~~~d--------~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp---- 267 (506)
.|. + ...+..+|...... +.-| +++|++.+++. ....+..|++.-.....|.+-|
T Consensus 160 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~--~~~~iAAvIvEPiqg~gG~~~p~~~y 237 (459)
T PRK05965 160 TALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIAASVAALRAKVAEL--GADNVAAFFCEPIQGSGGVIVPPKGW 237 (459)
T ss_pred cCCchhhcccCCCCCCCEEcCCCcccccccCCChHHHHHHHHHHHHHHHHhc--CCCceEEEEEeccccCCCCccCCHHH
Confidence 221 1 12334454321000 0123 25666666532 1133455666544444565533
Q ss_pred hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCC-cceEEEEeCchhHHhhhcCCcc-
Q 048643 268 LKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTL-DCCCLWVKDPSALVSSLSTNPE- 345 (506)
Q Consensus 268 l~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~-~~g~~~~r~~~~l~~~~~~~~~- 345 (506)
+++|.++|++||+.+++|+.+.|+.....-+.....|+ ..|.+++ -|.++..+ +.|.++++++- .+.+.....
T Consensus 238 l~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~~--gKgl~gG~~Pi~av~~~~~i--~~~~~~~~~~ 312 (459)
T PRK05965 238 LKAMREACRELGILFVADEVITGFGRTGPLFACEAEGV-VPDLMTV--AKGLTSGYVPMGAVLMSDHV--YQGIADGAGA 312 (459)
T ss_pred HHHHHHHHHHcCCEEEEechhccCccCchhhhHhhcCC-CCCeEEe--chhhccCCcceeEEEEcHHH--HHHHhccccc
Confidence 89999999999999999999887754332222222344 5888887 48887664 78888887542 233321110
Q ss_pred --ccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCC---c----c-c
Q 048643 346 --YLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRV---S----P-S 415 (506)
Q Consensus 346 --yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~---~----p-~ 415 (506)
.+... .|. .+.+........+|+.+-++ +++++..++.++|.+.|+++..+ . . .
T Consensus 313 ~~~~~h~------------~T~-~gnpl~~Aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl 376 (459)
T PRK05965 313 AAPVGHG------------YTY-SAHPVSAAVGLEVLRLYHEG---GLLANGQKAGPRFAAGLDALRAHPLVGDVRGRGL 376 (459)
T ss_pred ccccccc------------CCC-CCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHhhccCCCEEEEeecce
Confidence 00000 011 11111222334445555444 35566777888888888765222 1 1 3
Q ss_pred eEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 048643 416 AVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQL 495 (506)
Q Consensus 416 ~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~ 495 (506)
++.+.+...... + ..... ......++.+.+.++|.+. .+ .|..++|++. ....+++||+++++.|.+..
T Consensus 377 ~~gie~~~~~~~---~-~~~~~--~~~~~~~i~~~~~~~Gll~-~~---~g~~~i~~~P-pL~it~~ei~~~~~~l~~~l 445 (459)
T PRK05965 377 LGALELVADKAT---K-TPFDA--ALDPADRIFDRAYANGLVF-RA---FGDGVLGFAP-ALCCTEGEFDLIFERTRKTL 445 (459)
T ss_pred EEEEEEeccccc---c-CCCCc--hhHHHHHHHHHHHhCCeEE-Ee---cCCcEEEEEC-CCcCCHHHHHHHHHHHHHHH
Confidence 334443221000 0 00000 0124567778888889753 32 2446789886 45678899999999999999
Q ss_pred HHHHccCC
Q 048643 496 EAFLTTNT 503 (506)
Q Consensus 496 ~~l~~~~~ 503 (506)
+++..+++
T Consensus 446 ~~~~~~~~ 453 (459)
T PRK05965 446 DDVLADPD 453 (459)
T ss_pred HHHhcCcc
Confidence 98866554
No 322
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.32 E-value=5.8e-09 Score=109.20 Aligned_cols=312 Identities=11% Similarity=0.029 Sum_probs=171.0
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHH
Q 048643 131 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQI 210 (506)
Q Consensus 131 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~ 210 (506)
.+...++.+.|++++..... ...+|+++||+||..|+..||... + ++.+|......|-...-+..+
T Consensus 98 ~~~~~~la~~l~~~~p~~~~------~~v~f~~sGseA~e~AlklAr~~t-------g-r~~ii~~~~~yHG~t~~al~~ 163 (443)
T PRK06058 98 YEGYVAVAEQLNRLTPGDHE------KRSALFNSGAEAVENAVKIARSYT-------G-RQAVVVFDHAYHGRTNLTMAL 163 (443)
T ss_pred CHHHHHHHHHHHHhCCCCCC------CEEEEeCCcHHHHHHHHHHHHHhh-------C-CCeEEEECCCcCcChHHHHhh
Confidence 34555677888888743211 146889999999999999998752 1 223444455566554444433
Q ss_pred hCC--------C--CCCeEEEecCCCCC----cccCH-HHHHHHHHHHHh--cCCccEEEEEeccCCCCCcccC----hh
Q 048643 211 VGI--------D--LKNFRAIKTTKSSS----YGLSP-DSLLTQINLDVE--AGLVPLFLCATIGTTAITAVDP----LK 269 (506)
Q Consensus 211 ~G~--------g--~~~v~~v~~~~~~~----~~~d~-~~L~~~i~~~~~--~g~~p~~Vv~t~gtt~tG~idp----l~ 269 (506)
.+. + ...+..+|.....+ ...+. +.+++.++.-.+ .+..+.+|++.-.....|.+-| ++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iAavi~EPi~g~gG~~~p~~~yl~ 243 (443)
T PRK06058 164 TAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAITVIEKQVGADNLAAVIIEPIQGEGGFIVPAEGFLP 243 (443)
T ss_pred cCCCcccccccCCCCCCceEcCCCcccccccccccchHHHHHHHHHHHHHhhCCCceEEEEECCccCCCCCcCCCHHHHH
Confidence 321 1 12344444311000 01111 222222221111 1233455665544444465543 99
Q ss_pred HHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCC
Q 048643 270 PLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKN 349 (506)
Q Consensus 270 ~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~ 349 (506)
+|.++|++||+.+++|.++.|+......+.....++ ..|.+++. |.++..++.|+++.++. +.+.+... ...
T Consensus 244 ~lr~lc~~~gillI~DEV~tGfgRtG~~fa~~~~gv-~PDiv~~g--K~l~~G~Pi~av~~~~~--i~~~~~~~--~~~- 315 (443)
T PRK06058 244 ALLEWCRENGVVFIADEVQTGFARTGAWFACEHEGI-VPDLITTA--KGIAGGLPLSAVTGRAE--IMDAPHPG--GLG- 315 (443)
T ss_pred HHHHHHHHcCCEEEEeccccCCCcChhhhHHHhcCC-CCCEEEEc--ccccCCCccEEEEEcHH--HHhhccCC--CCC-
Confidence 999999999999999999987643222221122244 46888884 99887788898888653 22233210 000
Q ss_pred ccccCCCccCCCCccccCCCCCCchHHHHH---HHHhchhHHHHHHHHHHHHHHHHHHHHHcC----CCCc---c--ceE
Q 048643 350 KATESKQVVDYKDWQITLSRRFRSLKLWLV---IRNYGVANLRHFLRSHVNMAKLFERLVASD----KRVS---P--SAV 417 (506)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~sr~~~al~~~~~---l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~----~~~~---p--~~v 417 (506)
.+-...++...++ |+.+-.+ ++.++..++.++|.+.|+++ +.+. . .++
T Consensus 316 -----------------~T~~gnpl~~aaa~a~L~~~~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G~~~ 375 (443)
T PRK06058 316 -----------------GTYGGNPVACAAALAAIETIEED---DLVARARQIEALMTDRLRALAAEDDRIGDVRGRGAMI 375 (443)
T ss_pred -----------------CCCCCCHHHHHHHHHHHHHHHHc---CHHHHHHHHHHHHHHHHHHHHhhCCcEEeeeccceEE
Confidence 0111233333344 4443333 45566667778888888653 2211 1 444
Q ss_pred EEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 048643 418 MDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEA 497 (506)
Q Consensus 418 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~ 497 (506)
.+.+.+... . . ...+...++.+.+.++|.+ +.+.... ..++|+.. ....|+++|+++++.|+++.++
T Consensus 376 ~i~~~~~~~-------~-~--~~~~~~~~l~~~~~~~Gv~-~~~~~~~-~~~lr~~P-pl~~t~~~i~~~~~~l~~~l~~ 442 (443)
T PRK06058 376 AIELVKPGT-------T-E--PDAELTKALAAAAHAAGVI-VLTCGTY-GNVIRLLP-PLVIGDELLREGLDVLEAALAD 442 (443)
T ss_pred EEEEecCCC-------C-C--CcHHHHHHHHHHHHHCCeE-EeccCCC-CCEEEEEC-CCccCHHHHHHHHHHHHHHHHh
Confidence 444432200 0 0 0023456778888888875 4332111 25799986 4567888999999999988764
No 323
>PRK06062 hypothetical protein; Provisional
Probab=99.31 E-value=6.1e-09 Score=109.02 Aligned_cols=320 Identities=10% Similarity=-0.000 Sum_probs=175.1
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHH
Q 048643 131 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQI 210 (506)
Q Consensus 131 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~ 210 (506)
.+.+.++.+.|+++..-+. ...+|+++||+|+..|+..||... + ++.+|......|-...-+...
T Consensus 94 ~~~~~~lae~L~~~~p~~~-------~~v~f~~SGsEAve~AlklAr~~t-------g-r~~ii~~~~~yHG~t~~als~ 158 (451)
T PRK06062 94 NDARSEAARLIAERAPGDL-------SKVFFTNGGADANEHAVRMARLHT-------G-RPKVLSAYRSYHGGTGSAINL 158 (451)
T ss_pred CHHHHHHHHHHHHhCCCCC-------CEEEEcCChHHHHHHHHHHHHHhh-------C-CceEEEEeCCCCCCCHHHHhh
Confidence 4445556677777763211 267899999999999999999752 1 233444444556444334333
Q ss_pred hCCC--------CCCeEEEecCCCCC--c--ccC-------HHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC----
Q 048643 211 VGID--------LKNFRAIKTTKSSS--Y--GLS-------PDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP---- 267 (506)
Q Consensus 211 ~G~g--------~~~v~~v~~~~~~~--~--~~d-------~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp---- 267 (506)
.|.. ...+..++...... + ..| +++|++.++.. .+..+.+|++.-.....|.+-|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~--~~~~iAaviiEPv~g~gG~~~p~~~y 236 (451)
T PRK06062 159 TGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEEECERALAHLERVIELE--GPSTIAAILLESVPGTAGILVPPPGY 236 (451)
T ss_pred cCCcccccCCCCCCCCEEeCCCCccccccCCCChHHHHHHHHHHHHHHHHhc--CCCceEEEEEccccCCCCcccCCHHH
Confidence 3321 01233333221000 0 012 57777777531 1133556666655556688877
Q ss_pred hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCC-cceEEEEeCchhHHhhhcCCccc
Q 048643 268 LKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTL-DCCCLWVKDPSALVSSLSTNPEY 346 (506)
Q Consensus 268 l~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~-~~g~~~~r~~~~l~~~~~~~~~y 346 (506)
+++|.++|++||+.+++|.++.|+......+.....|+ ..|.+++ -|.++..+ +.|.++.++. +.+.+.. ..+
T Consensus 237 l~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~~~~gv-~PDi~t~--gK~lggG~~Pigav~~~~~--i~~~~~~-~~~ 310 (451)
T PRK06062 237 LAGVRELCDRHGIVLIADEVMAGFGRTGKWFAIEHFGV-VPDLITF--AKGVNSGYVPLGGVAISEA--IAATFAD-RPY 310 (451)
T ss_pred HHHHHHHHHHcCCEEEeeccccCCCcCcHHHHHHhcCC-CCCeeee--chhhhcCCcCcEEEEEcHH--HHHHhcc-CCC
Confidence 99999999999999999999987533222212222345 5787775 59988664 6788887753 2334421 111
Q ss_pred cCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHH-HHHHHHHHc----CCCCc----c-ce
Q 048643 347 LKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMA-KLFERLVAS----DKRVS----P-SA 416 (506)
Q Consensus 347 l~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a-~~l~~~l~~----~~~~~----p-~~ 416 (506)
... .|.. +.+.......++|..+-.+. ++++..++. ++|.+.|++ .|.+. - .+
T Consensus 311 ~~~-------------~T~~-gnpl~~Aaa~a~L~~l~~~~---l~~~~~~~G~~~l~~~L~~l~~~~~~v~~vrG~Gl~ 373 (451)
T PRK06062 311 PGG-------------LTYS-GHPLACAAAVATINAMEEEG---IVENAARIGAEVLGPGLRELAERHPSVGEVRGLGVF 373 (451)
T ss_pred CCC-------------CCCC-CCHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHHhcCCcEEeEeccccE
Confidence 100 0111 11222233444555554443 444455554 455555544 33221 1 33
Q ss_pred EEEeecCCCcccccccccchHH-HHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 048643 417 VMDKLKPKYENCHSQQLVTEEE-AINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQL 495 (506)
Q Consensus 417 v~f~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~ 495 (506)
+.+.+....... .+.... .-.....++.+.+.++|.+ +.+ . ...+|++. ....|++|||++++.++++.
T Consensus 374 ~gve~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~~Gvl-~~~--~--~~~lrl~p-pl~~t~~eid~~~~~l~~~l 443 (451)
T PRK06062 374 WALELVADRETR----EPLAPYGASSAAMAAVKAACKERGLL-PFV--N--GNRIHVVP-PCTVTEDEVREGLAILDAAL 443 (451)
T ss_pred EEEEEccccccc----CCCcccchhhHHHHHHHHHHHHCCcE-Eee--c--CCEEEEEC-CccCCHHHHHHHHHHHHHHH
Confidence 444432110000 000000 0012356788888888975 332 1 24689876 34678899999999999998
Q ss_pred HHHHc
Q 048643 496 EAFLT 500 (506)
Q Consensus 496 ~~l~~ 500 (506)
+++..
T Consensus 444 ~~~~~ 448 (451)
T PRK06062 444 AVADA 448 (451)
T ss_pred HHhhh
Confidence 87653
No 324
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.31 E-value=7.2e-09 Score=108.21 Aligned_cols=320 Identities=13% Similarity=0.134 Sum_probs=174.0
Q ss_pred HHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHh
Q 048643 132 ELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIV 211 (506)
Q Consensus 132 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~ 211 (506)
+.+.++.+.|++++. ... ...+|+++||+|+..|+..||.....+ +..+ +..+|......|-...-+..+.
T Consensus 89 ~~~~~la~~l~~~~p--~~~-----~~v~f~~sGseA~e~AlklAr~~~~~~-g~~~-r~~ii~~~~~yHG~t~gals~t 159 (442)
T PRK13360 89 PKAFELANRIAEIAP--GGL-----NHVFFTNSGSESVDTALKIALAYHRAR-GEGS-RTRLIGRERGYHGVGFGGISVG 159 (442)
T ss_pred HHHHHHHHHHHHhCC--CCC-----CEEEEeCCcHHHHHHHHHHHHHHHHhc-CCCC-CcEEEEEcCCcCCccHhhhhcc
Confidence 444566778888763 111 157899999999999999999763211 1110 2234444545554322222222
Q ss_pred CC-------C--CCCeEEEecCCC-CC--cc--------cCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC----
Q 048643 212 GI-------D--LKNFRAIKTTKS-SS--YG--------LSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP---- 267 (506)
Q Consensus 212 G~-------g--~~~v~~v~~~~~-~~--~~--------~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp---- 267 (506)
|. + ...+..+|.... .. +. -..++|+++++.. .+..+.+|++.-.....|.+-|
T Consensus 160 g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~--~~~~~aavivEpi~g~~G~~~~~~~f 237 (442)
T PRK13360 160 GIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPEHGAELADELERLVTLH--DASTIAAVIVEPVAGSTGVLIPPKGY 237 (442)
T ss_pred CChhhhhccCCCCCCCEEeCCCchhhccccCCChHHHHHHHHHHHHHHHHhc--CCCcEEEEEEccccCCCCCccCCHHH
Confidence 21 1 113444554310 00 00 1245777777532 1234556777666666788878
Q ss_pred hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCC-CcceEEEEeCchhHHhhhcCCccc
Q 048643 268 LKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSALVSSLSTNPEY 346 (506)
Q Consensus 268 l~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~y 346 (506)
+++|.++|++||+++++|.++.|+......+.....++ ..|.+++ -|.++.. +++|.++++++ +.+.+...+..
T Consensus 238 l~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv-~PDivt~--gK~l~gG~~P~gav~~~~~--i~~~~~~~~~~ 312 (442)
T PRK13360 238 LQRLREICDKHGILLIFDEVITGFGRLGAPFAAQYFGV-TPDLLTC--AKGLTNGAIPMGAVFVSSE--IHDAFMQGPEA 312 (442)
T ss_pred HHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCC-CCceeee--eeccccCccceEEEEEcHH--HHHHhhcCCcc
Confidence 99999999999999999999965533222111112244 4787765 5888644 34677776543 22333221110
Q ss_pred cCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c-----ceEE
Q 048643 347 LKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS---P-----SAVM 418 (506)
Q Consensus 347 l~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p-----~~v~ 418 (506)
.. .-+...|.. +.+........+|+.+-.++ ++++..++.++|.+.|+++..+. . .++.
T Consensus 313 ~~---------~~~~~~T~~-g~pl~~aaa~a~L~~l~~~~---l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl~~~ 379 (442)
T PRK13360 313 GI---------EFFHGYTYS-GHPLACAAALATLDLYEREG---LLTRAARLAPYWEDALHSLRDAPHVIDIRNLGLVGA 379 (442)
T ss_pred cc---------ccccCCCCC-CCHHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHhhcCCCeeeeeccceEEE
Confidence 00 000001111 12222234445555554443 55677778888888887643221 1 1122
Q ss_pred EeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 048643 419 DKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAF 498 (506)
Q Consensus 419 f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l 498 (506)
+.+.+.. . .. .....++.+++.++|.. +... + ..+|++. ....|++|||++++.|+++.+++
T Consensus 380 ~~l~~~~--------~-~~---~~~~~~~~~~l~~~Gvl-~~~~---~-~~lr~~P-pl~~t~~eid~~~~~l~~~l~~~ 441 (442)
T PRK13360 380 VELAPRD--------G-KP---GKRAYEVFLKCFEKGLM-IRYT---G-DILALSP-PLIIEEAQIDELFDILAQALKET 441 (442)
T ss_pred EEEecCC--------C-Cc---chhHHHHHHHHHHCCcE-EEec---C-CEEEEeC-CCccCHHHHHHHHHHHHHHHHHh
Confidence 2222210 0 00 11235667778888874 3321 2 4699987 45678889999999999988764
No 325
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.31 E-value=1.4e-09 Score=113.45 Aligned_cols=305 Identities=9% Similarity=-0.005 Sum_probs=159.1
Q ss_pred HHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCC
Q 048643 135 NIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGID 214 (506)
Q Consensus 135 ~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g 214 (506)
.++.+.|++.+.-.+ ..++++|||+|+..|+.+||... . ++.+|......|-...-.....+.+
T Consensus 91 ~~lae~l~~~~~~~~--------~v~~~~sGseA~e~Alk~ar~~~-g-------r~~ii~~~~~yhG~~~~~~~~~~~~ 154 (423)
T TIGR00713 91 ILLAKEIISRVPSVE--------MVRFVNSGTEATMSAVRLARGYT-G-------RDKIIKFEGCYHGHHDALLVKAGSG 154 (423)
T ss_pred HHHHHHHHHhCCccc--------EEEEeCCHHHHHHHHHHHHHHhh-C-------CCEEEEEcCCCCCChhhhhccccCc
Confidence 445566666654321 57999999999999999998752 1 2334444444554332222211111
Q ss_pred CC----------------CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC----hhHHHHH
Q 048643 215 LK----------------NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP----LKPLCDV 274 (506)
Q Consensus 215 ~~----------------~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp----l~~I~~i 274 (506)
.. .+..+| ..|+++|++++++. +..+.+|++.....++|.+-| +++|.++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~-------~~d~~~l~~~i~~~---~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l 224 (423)
T TIGR00713 155 AATLGLPTSPGVPEDFAKLTLVLP-------YNDLEALEEVFEEY---GEEIAGVIVEPVAGNMGVVPPKPEFLAGLRAL 224 (423)
T ss_pred ccccCCCCCCCCCcccccceEEeC-------CCCHHHHHHHHHHc---CCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHH
Confidence 00 111222 12899999988742 223445666433333788866 7999999
Q ss_pred HHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccC
Q 048643 275 AKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATES 354 (506)
Q Consensus 275 a~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~ 354 (506)
|++||+++++|.+|.++ ...........++ ..|.+ ..-|.++..+..|+++.++. +.+.+.....+...
T Consensus 225 ~~~~~~llI~DEv~~g~-r~g~~~~~~~~~~-~pDi~--t~sK~l~~G~pig~v~~~~~--i~~~~~~~~~~~~~----- 293 (423)
T TIGR00713 225 TEEYGSLLIFDEVMTGF-RVALGGAQEYFGV-EPDLT--TLGKIIGGGLPVGAFGGRRE--IMERLAPEGPVYQA----- 293 (423)
T ss_pred HHHhCCEEEEEcccccc-ccCcchhHHHhCC-Ccchh--hhhhhhcCCCceeeeeEHHH--HHHhhCcCCCeeec-----
Confidence 99999999999999766 3211111112233 34644 36799986567888877642 22333211000000
Q ss_pred CCccCCCCccccCCCCCCchHHHHHHHHhchhH-HHHHHHHHHHHHHHHHHHHHcCCCCc-----c-ceEEEeecCCCcc
Q 048643 355 KQVVDYKDWQITLSRRFRSLKLWLVIRNYGVAN-LRHFLRSHVNMAKLFERLVASDKRVS-----P-SAVMDKLKPKYEN 427 (506)
Q Consensus 355 ~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g-~~~~i~~~~~~a~~l~~~l~~~~~~~-----p-~~v~f~~~~~~~~ 427 (506)
.+ .++.+........+|+.+..++ ++...+....+.+.|.+.+++. ++. + .++.+.+......
T Consensus 294 --------~T-~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~v~~~g~~~~v~~~~~~~~ 363 (423)
T TIGR00713 294 --------GT-LSGNPLAMAAGLATLKLLDEEGVYTELDELAKRLAEGLSEVLEDT-GIPHTVNRVGSMFSLFFTEEEVT 363 (423)
T ss_pred --------cC-CCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEeeccEEEEEEecCCCC
Confidence 01 0111112233334455443332 3333333444444455555555 332 2 4444434321100
Q ss_pred cccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 048643 428 CHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEA 497 (506)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~ 497 (506)
... .....+ .....++.+.+.++|.+ +.+.. ...+|++.. .++++|+++++.|+++.++
T Consensus 364 ~~~---~~~~~~-~~~~~~~~~~l~~~Gv~-v~~~~---~~~~~l~~~---~t~~~i~~~~~~l~~~l~~ 422 (423)
T TIGR00713 364 NYA---DAKKSD-TELFAKFFHEMLDKGVF-LPPSQ---FEACFLSAA---HTEEDIENTIEAAEEVFAE 422 (423)
T ss_pred Chh---hhhccc-HHHHHHHHHHHHHCCeE-EecCC---ccceeeECC---CCHHHHHHHHHHHHHHHhh
Confidence 000 000000 12234677778888864 54332 234677652 5788999999999988754
No 326
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.31 E-value=3.7e-09 Score=110.21 Aligned_cols=310 Identities=10% Similarity=0.037 Sum_probs=166.6
Q ss_pred HHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhC
Q 048643 133 LENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVG 212 (506)
Q Consensus 133 lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G 212 (506)
...++.+.++++.+.+.. ...+++++|++|+..||..||... + ++.+|.++...|-+..-+....+
T Consensus 85 ~~~~la~~l~~~~~~~~~------~~~~f~~sGsea~e~Alklar~~~-~-------r~~iv~~~~~yHG~~~~~~~~~~ 150 (425)
T PRK08088 85 PYLELCEKMNQKVPGDFA------KKTLLVTTGSEAVENAVKIARAAT-K-------RSGVIAFTGAYHGRTHYTLALTG 150 (425)
T ss_pred HHHHHHHHHHHhCCCCCC------CEEEEeCCcHHHHHHHHHHHHHHh-C-------CCeEEEECCccCCccHHHHHhhC
Confidence 334677888887764321 156888899999999999998752 1 23345556666655433333222
Q ss_pred C--------C--CCCeEEE--ecCCCCCcccC----HHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC----hhHHH
Q 048643 213 I--------D--LKNFRAI--KTTKSSSYGLS----PDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP----LKPLC 272 (506)
Q Consensus 213 ~--------g--~~~v~~v--~~~~~~~~~~d----~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp----l~~I~ 272 (506)
- + ...+..+ |.+.. .++ ++.|++.+++.. .+..+.+|++.-.....|.+-+ +++|.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~p~~~~---~~~~~~~~~~l~~~l~~~~-~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~ 226 (425)
T PRK08088 151 KVNPYSAGMGLMPGHVYRALYPCPLH---GVSEDDAIASIERIFKNDA-APEDIAAIIIEPVQGEGGFYAASPAFMQRLR 226 (425)
T ss_pred CCCccccCCCCCCCCcEEcCCCcccc---CccHHHHHHHHHHHHHhcc-CCCceEEEEECcccCCCCCcCCCHHHHHHHH
Confidence 1 0 1122222 22211 122 456777775321 2234556666555555566654 99999
Q ss_pred HHHHHhCCEEEeecccccccccCccchh-hhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCcc
Q 048643 273 DVAKQFGIWVHVDAAYAGSACICPEFQH-FIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKA 351 (506)
Q Consensus 273 ~ia~~~g~~lhVDaA~gg~~~~~~~~~~-~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~ 351 (506)
++|++||+++++|.+|++.... ..... ...++ ..|. .++.|.++..+..|+++.+.. +.+.+... .+.
T Consensus 227 ~l~~~~~~~lI~Dev~~g~g~~-g~~~~~~~~~~-~pdi--~s~sK~l~~G~rig~v~~~~~--~~~~~~~~-~~~---- 295 (425)
T PRK08088 227 ALCDEHGIMLIADEVQTGAGRT-GTLFAMEQMGV-AADL--TTFAKSIAGGFPLAGVTGRAE--VMDAIAPG-GLG---- 295 (425)
T ss_pred HHHHHcCCEEEEeccccCCCcC-cchhHHhhcCC-CCCE--EEEeccccCCCcceeeEecHH--HHhhcCCC-CCC----
Confidence 9999999999999999874222 11110 01122 2443 445799986677888887532 22233211 000
Q ss_pred ccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHH----cCCCCc----c-ceEEEeec
Q 048643 352 TESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVA----SDKRVS----P-SAVMDKLK 422 (506)
Q Consensus 352 ~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~----~~~~~~----p-~~v~f~~~ 422 (506)
.+.. ...+...+++..+..-...+++++..++.+++.+.|. +.|.+. + ..+.+++.
T Consensus 296 -----------~t~~----~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~g~G~~~~l~l~ 360 (425)
T PRK08088 296 -----------GTYA----GNPIACAAALAVLKVFEQENLLQKANALGEKLKDGLLAIAEKHPEIGDVRGLGAMIAIELF 360 (425)
T ss_pred -----------CCCC----cCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEeccceEEEEEEe
Confidence 0111 1222222333222111122344444444555555553 344333 2 44455542
Q ss_pred CCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 048643 423 PKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAF 498 (506)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l 498 (506)
.... ..... .....++.+.+.+.|..+...... ..++|+++ ....++++|+..++.|.++.+++
T Consensus 361 ~~~~-------~~~p~--~~~~~~l~~~~~~~Gv~~~~~~~~--~~~iRl~~-~~~~t~~ei~~~i~~l~~~l~~~ 424 (425)
T PRK08088 361 EDGD-------HSKPN--AKLTAQIVARARDKGLILLSCGPY--YNVLRILV-PLTIEDAQIRQGLEIIAQCFDEA 424 (425)
T ss_pred cCCC-------CCCCC--HHHHHHHHHHHHhCCCEEecCCCC--CCEEEEEC-CCCcCHHHHHHHHHHHHHHHHhh
Confidence 2100 00000 233567888888889765432222 36799998 34667889999999999887654
No 327
>PRK07480 putative aminotransferase; Validated
Probab=99.30 E-value=1e-08 Score=107.46 Aligned_cols=327 Identities=11% Similarity=0.019 Sum_probs=171.0
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHH
Q 048643 131 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQI 210 (506)
Q Consensus 131 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~ 210 (506)
...+.++.+.|++++.-+.+ ..+|+++||+|+..|+.+||.....+ |..+ +..+|......|-...-+...
T Consensus 93 ~~~~~~lae~L~~~~p~~~~-------~v~f~~SGseA~e~AlklAr~~~~~~-g~~~-r~~ii~~~~~yHG~tl~a~s~ 163 (456)
T PRK07480 93 HPPAIELAAKLAEVAPPGFN-------HVFFTNSGSEANDTVLRMVRHYWALK-GKPQ-KKVIISRKNGYHGSTVAGASL 163 (456)
T ss_pred CHHHHHHHHHHHHhCCCCcC-------EEEEeCCcHHHHHHHHHHHHHHHHhc-CCCC-CcEEEEECCCcCCcchhhhhc
Confidence 34555566778887642211 57899999999999999998753221 1111 223444444456433222222
Q ss_pred hCC---------CCCCeEEEecCCCC--CcccC--------HHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC----
Q 048643 211 VGI---------DLKNFRAIKTTKSS--SYGLS--------PDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP---- 267 (506)
Q Consensus 211 ~G~---------g~~~v~~v~~~~~~--~~~~d--------~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp---- 267 (506)
.|. ....+..+|....- ....+ .+.|++.+.+. .+..+..|++.-.....|.+-|
T Consensus 164 ~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~vAAvi~EPiqg~gG~~~~~~~y 241 (456)
T PRK07480 164 GGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGLAAARQLEAKILEL--GADNVAAFIGEPIQGAGGVIIPPATY 241 (456)
T ss_pred cCChhhhcccCCCCCCCeecCCCcccccccCCChHHHHHHHHHHHHHHHHhc--CCCcEEEEEEccccCCCCCccCCHHH
Confidence 221 01123333321100 00011 25555555432 1223455666544445577655
Q ss_pred hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCC-cceEEEEeCchhHHhhhcCCccc
Q 048643 268 LKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTL-DCCCLWVKDPSALVSSLSTNPEY 346 (506)
Q Consensus 268 l~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~-~~g~~~~r~~~~l~~~~~~~~~y 346 (506)
+++|.++|++||+.+++|+++.|+.....-+.....|+ ..|.+++ -|.++..+ +.|.+++++. +.+.+......
T Consensus 242 l~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~~--gK~l~gG~~Pi~av~~~~~--i~~~~~~~~~~ 316 (456)
T PRK07480 242 WPEIQRICRKYDILLVADEVICGFGRTGEWFGSQHFGI-KPDLMTI--AKGLTSGYIPMGAVGVGDR--VAEVLIEEGGE 316 (456)
T ss_pred HHHHHHHHHHcCCEEEEechhhCCCcCcchhhhhhcCC-CCCeeee--ehhhccCCccceEEEEcHH--HHHHHhcCCCC
Confidence 99999999999999999999977643322222112244 4787776 58887554 5777777643 22334211111
Q ss_pred cCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHH-HHHHHHHHHHHHcC---CCCc----c-ceE
Q 048643 347 LKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSH-VNMAKLFERLVASD---KRVS----P-SAV 417 (506)
Q Consensus 347 l~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~-~~~a~~l~~~l~~~---~~~~----p-~~v 417 (506)
+... .|. .+.+........+|+.+-.++ ++++. .++.++|.+.|++. |.+. . .++
T Consensus 317 ~~~~------------~T~-~gnpl~~Aaa~a~L~~l~~~~---l~~~~~~~~g~~l~~~l~~l~~~~~i~~vrG~Glm~ 380 (456)
T PRK07480 317 FNHG------------FTY-SGHPVAAAVALANLRILRDEG---IVERVRDDTGPYLQKRLRELADHPLVGEVRGVGLVG 380 (456)
T ss_pred cccC------------CCC-CcCHHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHhhcCCCeeeEEeecceE
Confidence 1100 011 111222234445555554444 33444 35566666666543 2221 1 334
Q ss_pred EEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 048643 418 MDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEA 497 (506)
Q Consensus 418 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~ 497 (506)
.+.+...... .............+.+.+.++|.+. .+. + ..+|++. ....+++|||.+++.|++..++
T Consensus 381 gie~~~~~~~------~~~~~~~~~~~~~~~~~~~~~Gll~-~~~---~-~~l~~~P-pl~it~~eid~~~~~l~~al~~ 448 (456)
T PRK07480 381 AIELVKDKAT------RERFEAGGGVGTICRDHCFANGLIM-RAV---G-DRMIISP-PLVITHAEIDELVEKARKALDA 448 (456)
T ss_pred EEEEeccccc------cccCcchhhHHHHHHHHHHHCCcEE-eec---C-CEEEEEC-CCCCCHHHHHHHHHHHHHHHHH
Confidence 4444221000 0000000123456777888889754 321 2 4688876 3456889999999999999888
Q ss_pred HHcc
Q 048643 498 FLTT 501 (506)
Q Consensus 498 l~~~ 501 (506)
+.++
T Consensus 449 ~~~~ 452 (456)
T PRK07480 449 TAAE 452 (456)
T ss_pred HHHH
Confidence 7654
No 328
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.29 E-value=5.8e-09 Score=108.72 Aligned_cols=308 Identities=11% Similarity=0.046 Sum_probs=169.1
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHH
Q 048643 131 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQI 210 (506)
Q Consensus 131 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~ 210 (506)
...+.++.+++++++.-. ...+++++|++||..|+..+|... + ++.+|......|-...-+...
T Consensus 89 ~~~~~~la~~L~~~~~~~--------~~v~~~~sGseA~e~Aik~a~~~~-------g-~~~ii~~~~~yHG~t~~~~~~ 152 (426)
T PRK00062 89 TELEVELAELVIELVPSI--------EMVRMVNSGTEATMSAIRLARGYT-------G-RDKIIKFEGCYHGHADSLLVK 152 (426)
T ss_pred CHHHHHHHHHHHHhCCCC--------CEEEEecCHHHHHHHHHHHHHHHh-------C-CCeEEEEcCccCCchhhhhhc
Confidence 345556778888776311 157899999999999999998752 1 233455555566543222222
Q ss_pred hCCCC-----C---Ce-E-----EEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC----hhHHH
Q 048643 211 VGIDL-----K---NF-R-----AIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP----LKPLC 272 (506)
Q Consensus 211 ~G~g~-----~---~v-~-----~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp----l~~I~ 272 (506)
.|.+. . .+ + .+.+. .-|+++|++.+++. +....+|++.......|.+-| +++|.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~d~~~l~~~i~~~---~~~~aaiivEpv~~~~G~~~~~~~~l~~l~ 224 (426)
T PRK00062 153 AGSGAATLGLPDSPGVPEDFAKHTLTAP-----YNDLEAVEELFEEY---GDEIAAVIVEPVAGNMGVVPPKPGFLEGLR 224 (426)
T ss_pred cCccccccCCCCCCCCCcccccceEEcC-----CCCHHHHHHHHHhC---CCcEEEEEEeCCcCCCCCcCCCHHHHHHHH
Confidence 12110 0 00 0 11111 23789999888642 223456666655666888877 99999
Q ss_pred HHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCC-ccccCCcc
Q 048643 273 DVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTN-PEYLKNKA 351 (506)
Q Consensus 273 ~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~-~~yl~~~~ 351 (506)
++|++||+++++|++|.|+ ...........++ ..|.+ ...|.++..+..|++++++ + +.+.+... ..|...
T Consensus 225 ~l~~~~~~llI~DEv~~G~-r~g~~~~~~~~~~-~pDi~--~~gK~l~~G~p~ga~~~~~-~-i~~~~~~~~~~~~~~-- 296 (426)
T PRK00062 225 ELCDEHGALLIFDEVMTGF-RVALGGAQGYYGV-TPDLT--TLGKIIGGGLPVGAFGGRR-E-IMEQLAPLGPVYQAG-- 296 (426)
T ss_pred HHHHHcCCEEEEeechhcc-ccCCccHHHHhCC-CcchH--hhhhHhhCCCcceeeeEHH-H-HHHhhccCCCceecc--
Confidence 9999999999999999865 3221111111122 24543 4569988656678776653 2 23334211 111110
Q ss_pred ccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHc----CCCCc----c--ceEEEee
Q 048643 352 TESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVAS----DKRVS----P--SAVMDKL 421 (506)
Q Consensus 352 ~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~----~~~~~----p--~~v~f~~ 421 (506)
+ .++.+.....+..+|..+..+ +..++..++.+++++.|++ .+ +. + .++.+.+
T Consensus 297 ------------T-~~~~p~~~aaa~a~L~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~vrg~G~~~~i~l 359 (426)
T PRK00062 297 ------------T-LSGNPLAMAAGLATLKLLKEP---GFYEELEALTKRLAEGLKEAAKKAG-IPLTVNRVGSMFGLFF 359 (426)
T ss_pred ------------c-CcCCHHHHHHHHHHHHHHhcc---hHHHHHHHHHHHHHHHHHHHHHHcC-CceEEEEecceEEEEE
Confidence 0 011122233444555555333 3556666677777777753 33 32 1 4444544
Q ss_pred cCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 048643 422 KPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAF 498 (506)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l 498 (506)
.+........ ....-......+.+.+.++|. ++.+... ..++++ ...++++|+++++.|+++..++
T Consensus 360 ~~~~~~~~~~----~~~~~~~~~~~i~~~l~~~Gv-~v~~~~~---~~~~~~---~~~t~~ei~~~~~~l~~~l~~~ 425 (426)
T PRK00062 360 TDEPVTNYAD----AKKSDTERFARFFHAMLDEGV-YLAPSQF---EAGFVS---AAHTDEDIEKTLEAARKAFAAL 425 (426)
T ss_pred ecCCCcchhh----hccccHHHHHHHHHHHHHCCe-EeecCCc---Cceeee---ccCCHHHHHHHHHHHHHHHHhh
Confidence 3221000000 000001234567888888886 4444321 245554 4558889999999999887654
No 329
>PRK07482 hypothetical protein; Provisional
Probab=99.29 E-value=7.5e-09 Score=108.67 Aligned_cols=331 Identities=10% Similarity=0.023 Sum_probs=176.1
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHH
Q 048643 131 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQI 210 (506)
Q Consensus 131 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~ 210 (506)
++.+.++.+.|++++.-+- ...+|+++||+|+..|+..||.....+ +..+ ++.+|......|-...-+..+
T Consensus 93 ~~~~~~lAe~L~~~~p~~~-------~~v~f~~sGSEAve~AlKlAr~~~~~~-g~~~-r~~Ii~~~~~YHG~t~ga~s~ 163 (461)
T PRK07482 93 TEASITLSKRIIDRAPAGM-------SKVYYGLSGSDANETQIKLVWYYNNVL-GRPE-KKKIISRWRGYHGSGVVTGSL 163 (461)
T ss_pred CHHHHHHHHHHHHhCCCCc-------CEEEEeCchHHHHHHHHHHHHHHHHhc-CCCC-CceEEEecCccCCccHhhhhc
Confidence 4556667788888763211 157899999999999999999753221 2111 223444444455322212221
Q ss_pred h---------CCCCCCeEEEecCCCCCc-----------ccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC---
Q 048643 211 V---------GIDLKNFRAIKTTKSSSY-----------GLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP--- 267 (506)
Q Consensus 211 ~---------G~g~~~v~~v~~~~~~~~-----------~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp--- 267 (506)
. +.....+..+|.....+. .-+++.|++.+... .+..+.+|++.-.....|.+-|
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~iAAvi~EPvqg~gG~~~~~~~ 241 (461)
T PRK07482 164 TGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEEQFSAYCADELEELILAE--GPDTIAAFIAEPVLGTGGIVPPPAG 241 (461)
T ss_pred cCCchhhhccCCCCCCCEEcCCCccccccccCCCHHHHHHHHHHHHHHHHHhc--CCCcEEEEEECCccCCCCCcCCCHH
Confidence 1 111123444443210000 01456777777432 1233455666544444465532
Q ss_pred -hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCC-cceEEEEeCchhHHhhhcCCcc
Q 048643 268 -LKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTL-DCCCLWVKDPSALVSSLSTNPE 345 (506)
Q Consensus 268 -l~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~-~~g~~~~r~~~~l~~~~~~~~~ 345 (506)
+++|.++|++||+.+++|+.+.|+......+.....|+ ..|.+++ -|.++..+ +.|.++++++ +.+.+.....
T Consensus 242 yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~~--gKgl~gG~~Pi~av~~~~~--i~~~~~~~~~ 316 (461)
T PRK07482 242 YWPAIQAVLKKYDILLIADEVVTGFGRLGSMFGSDHYGI-EPDLITV--AKGLTSAYAPLSGSIVGEK--VWDVLEQGSD 316 (461)
T ss_pred HHHHHHHHHHHhCCEEEEeccccCCCcCcchhhHHhcCC-CCCEEEE--ccccccCccccceeeecHH--HHHHHhcccc
Confidence 89999999999999999999987754433322223345 5899887 58887665 6777777653 2233321110
Q ss_pred ccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHc----CCCCc----c-ce
Q 048643 346 YLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVAS----DKRVS----P-SA 416 (506)
Q Consensus 346 yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~----~~~~~----p-~~ 416 (506)
... .. ....|. .+.+.......++|+.+-+++ ++++..++.++|.+.|++ .|.+. . .+
T Consensus 317 ~~~--------~~-~h~~T~-~gnpl~~Aaa~a~L~~~~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Glm 383 (461)
T PRK07482 317 EHG--------AI-GHGWTY-SGHPICAAAALANLDILEREN---LVGNAAEVGAYFRARLRAAFGDHPLVGEVRGVGML 383 (461)
T ss_pred cCC--------cc-ccCCCC-CcCHHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHHhcCCCEEEEeeceeE
Confidence 000 00 000011 111112233344555554443 445556677777777754 33221 1 33
Q ss_pred EEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 048643 417 VMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLE 496 (506)
Q Consensus 417 v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~ 496 (506)
+.+.+...... ..+.... .....++...+.++|.+ +.... +...+|+.. ....|++||+++++.|++..+
T Consensus 384 ~giel~~~~~~----~~~~~~~--~~~~~~i~~~~~~~Gvl-~~~~~--~~~~i~~~P-pl~it~~ei~~~~~~l~~~l~ 453 (461)
T PRK07482 384 AAVEFVADRDD----RTPFDPA--LKIGPQVSAAALERGVI-ARAMP--HGDILGFAP-PLVLTRAEADEIVAIAKDAVD 453 (461)
T ss_pred EEEEeccCCCc----CCCCChh--hHHHHHHHHHHHHCCcE-EecCC--CCCEEEEeC-CCCCCHHHHHHHHHHHHHHHH
Confidence 33433221000 0000000 12356788888889964 32211 235788876 467789999999999999887
Q ss_pred HHHc
Q 048643 497 AFLT 500 (506)
Q Consensus 497 ~l~~ 500 (506)
++.+
T Consensus 454 ~~~~ 457 (461)
T PRK07482 454 EVLG 457 (461)
T ss_pred HHHH
Confidence 7643
No 330
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.28 E-value=1.5e-08 Score=105.49 Aligned_cols=307 Identities=13% Similarity=0.047 Sum_probs=167.0
Q ss_pred HHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhC
Q 048643 133 LENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVG 212 (506)
Q Consensus 133 lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G 212 (506)
.+.++.+.|++++.-... ...+|+++||+|+..|+..||... + ++.+|......|-...-+..+.|
T Consensus 77 ~~~~la~~l~~~~p~~~~------~~v~f~~sGseA~e~AlklAr~~t-------g-r~~ii~~~~~yHG~t~~~~~~~~ 142 (420)
T TIGR00700 77 GYVALAEKLNRIAPGSGP------KKSVFFNSGAEAVENAVKIARSYT-------G-RPGVVAFDHGFHGRTNMTMALTA 142 (420)
T ss_pred HHHHHHHHHHHhCCCCCC------CEEEEeCCcHHHHHHHHHHHHHhc-------C-CCcEEEECCCcCCCcHHHHHhcC
Confidence 344556777777632111 157899999999999999998752 1 22344455556644333333322
Q ss_pred --------CC--CCCeEEEecCCCCC---------cccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC----hh
Q 048643 213 --------ID--LKNFRAIKTTKSSS---------YGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP----LK 269 (506)
Q Consensus 213 --------~g--~~~v~~v~~~~~~~---------~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp----l~ 269 (506)
.+ ...+..+|...... +.-+++.+++.+.... .+.....|++.-....+|.+-| ++
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~iAavi~Epi~g~~G~~~~~~~~l~ 221 (420)
T TIGR00700 143 KVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGELAAARAIFVIDV-GANNVAALVIEPVQGEGGFIVPAKGFVP 221 (420)
T ss_pred CCcccccCCCCCCCCcEEeCCCccccccccccchhHHHHHHHHHHHHHhhc-CCCcEEEEEECCccCCCCCccCCHHHHH
Confidence 11 12344454421000 0112556666664221 2234556666655556677655 99
Q ss_pred HHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCC
Q 048643 270 PLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKN 349 (506)
Q Consensus 270 ~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~ 349 (506)
+|.++|++||+|+++|.+|.|+.....-+.....++ ..|.++ .-|.++..+..|+++.++. +.+.+... ...
T Consensus 222 ~l~~lc~~~gillI~DEV~tg~gr~g~~~a~~~~~~-~pDi~~--lsK~l~~G~pig~v~~~~~--i~~~~~~~--~~~- 293 (420)
T TIGR00700 222 ALLDWCREHGIVFIADEVQTGFARTGAMFACEHEGP-EPDLIT--TAKSLADGLPLSGVTGRAE--IMDAPAPG--GLG- 293 (420)
T ss_pred HHHHHHHHcCCEEEEEecccCCcccchhHHHhhcCC-CCCEEE--eeccccCCcceEEEEecHH--HHhhcCCC--CcC-
Confidence 999999999999999999987643221111111122 467665 5799987788898887643 22233210 000
Q ss_pred ccccCCCccCCCCccccCCCCCCchHHHHH---HHHhchhHHHHHHHHHHHHHHHHHHHHH----cCCCCc---c--ceE
Q 048643 350 KATESKQVVDYKDWQITLSRRFRSLKLWLV---IRNYGVANLRHFLRSHVNMAKLFERLVA----SDKRVS---P--SAV 417 (506)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~sr~~~al~~~~~---l~~~G~~g~~~~i~~~~~~a~~l~~~l~----~~~~~~---p--~~v 417 (506)
.++ ...++...++ ++.+..+.+.+ +..++.+++.+.|+ +.|.+. + .++
T Consensus 294 -------------~T~----~~~pl~~aaa~a~l~~l~~~~~~~---~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G~~~ 353 (420)
T TIGR00700 294 -------------GTY----AGNPLACAAALAVLAIIESEGLIE---RARQIGRLVTDRLTTLKAVDPRIGDVRGLGAMI 353 (420)
T ss_pred -------------CCC----CcCHHHHHHHHHHHHHHHhccHHH---HHHHHHHHHHHHHHHHHhhCCCEEEeeccceEE
Confidence 011 1123443444 55444444433 33444444555554 344333 2 444
Q ss_pred EEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 048643 418 MDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQL 495 (506)
Q Consensus 418 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~ 495 (506)
.+.+.+... . . .......++.+.+.++|+........ + .++|++.. ...++++|+++++.|.++.
T Consensus 354 ~i~~~~~~~-------~-~--~~~~~~~~l~~~~~~~Gv~i~p~~~f-~-~~lRl~p~-l~~~~~~l~~~~~~l~~~l 418 (420)
T TIGR00700 354 AVELVDPGT-------T-E--PDAGLAERIATAAHAAGLLLLTCGMF-G-NIIRFLPP-LTIGDELLSEGLDILCAIL 418 (420)
T ss_pred EEEEecCCC-------C-C--ccHHHHHHHHHHHHHCCeEEeccCCC-C-CEEEEECC-CCcCHHHHHHHHHHHHHHh
Confidence 554432100 0 0 01234567888888889754332222 2 58999872 3367889999999998875
No 331
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.28 E-value=2.7e-08 Score=104.11 Aligned_cols=316 Identities=11% Similarity=0.027 Sum_probs=173.4
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHH
Q 048643 131 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQI 210 (506)
Q Consensus 131 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~ 210 (506)
++.+.++.+.|++++.-... ...+|+++||+||..|+..||... + ++.+|......|-...-+..+
T Consensus 84 ~~~~~~lae~L~~~~p~~~~------~~v~f~~SGseA~e~AiklAr~~t-------g-r~~ii~~~~~YHG~t~~als~ 149 (445)
T PRK08593 84 HEPLVRLAKKLCELAPGDFE------KRVTFGLSGSDANDGIIKFARAYT-------G-RPYIISFTNAYHGSTYGSLSM 149 (445)
T ss_pred CHHHHHHHHHHHHhCCCCCC------CEEEECCchHHHHHHHHHHHHHhh-------C-CCeEEEECCCcCCCcHHHHhh
Confidence 34455566778887632211 157899999999999999998752 1 233444555566554444444
Q ss_pred hCCC----------CCCeEEEecCCCCC---cccCH-------HHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC---
Q 048643 211 VGID----------LKNFRAIKTTKSSS---YGLSP-------DSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP--- 267 (506)
Q Consensus 211 ~G~g----------~~~v~~v~~~~~~~---~~~d~-------~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp--- 267 (506)
.+.. ...++.+|...... ...+. +.+++.+.+.. ......+|++.-.....|.+-|
T Consensus 150 s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~iAavI~EPv~g~gG~~~~~~~ 228 (445)
T PRK08593 150 SGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKEMFEKYL-PADEVACIVIETIQGDGGLLEPVPG 228 (445)
T ss_pred cCCCcccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHHHHHHHHHHHhhc-CCCceEEEEEccccCCCCCcCCCHH
Confidence 3321 11345555432100 01122 33333333211 1123556666655556677766
Q ss_pred -hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccc
Q 048643 268 -LKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEY 346 (506)
Q Consensus 268 -l~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~y 346 (506)
+++|.++|++||+++++|+++.|+......+.....++ ..|.+++ -|.++..++.|+++.++. +.+.+.. ..+
T Consensus 229 yl~~l~~lc~~~g~llI~DEv~tg~GrtG~~~a~~~~gv-~pDi~t~--gK~l~~G~p~gav~~~~~--i~~~~~~-~~~ 302 (445)
T PRK08593 229 YFEALYKFCREHGILFAVDDIQQGLGRTGKWSSISHFNI-TPDLMSF--GKSLAGGMPMSAIVGRKE--IMESLEA-PAH 302 (445)
T ss_pred HHHHHHHHHHHcCCEEEEechhhCCCcCchHHHHHhcCC-CCCEeee--cccccCCcccEEEEEcHH--HHhhhcc-CCC
Confidence 99999999999999999999966532211111111233 4677665 588875566888877643 2233321 111
Q ss_pred cCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHc----CCCCc----c-ceE
Q 048643 347 LKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVAS----DKRVS----P-SAV 417 (506)
Q Consensus 347 l~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~----~~~~~----p-~~v 417 (506)
.. |. .+.+........+|+.+-.+ +++++..++.++|.+.|++ .|.+. . .++
T Consensus 303 ~~---------------T~-~~~pl~~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl~~ 363 (445)
T PRK08593 303 LF---------------TT-GANPVSCAAALATIDMIEDE---SLLQRSAEKGEYARKRFDQWVSKYNFVGDVRGYGLSI 363 (445)
T ss_pred CC---------------CC-CCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHhcCCcEEEEeccceEE
Confidence 11 11 11111223344455554333 4556667777777777765 33221 1 233
Q ss_pred EEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 048643 418 MDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEA 497 (506)
Q Consensus 418 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~ 497 (506)
.+.+...... . .. .......+...+.++|.. +.+. +...+|++. ....|++||+.++++++++.++
T Consensus 364 gi~l~~~~~~------~-~~--~~~~~~~~~~~~~~~Gv~-~~~~---~~~~lr~~p-~l~~t~~~id~~~~~l~~~l~~ 429 (445)
T PRK08593 364 GIDIVSDKKL------K-TR--DNEAALKICNYCFEHGVV-IIAV---AGNVLRFQP-PLVITYEQLDTALNTIEQAFTA 429 (445)
T ss_pred EEEEecCCCc------C-CC--cHHHHHHHHHHHHHCCeE-Eecc---CCCEEEEEC-CCccCHHHHHHHHHHHHHHHHH
Confidence 3333221000 0 00 023346778888888974 3322 235799988 4677888999999999999887
Q ss_pred HHc
Q 048643 498 FLT 500 (506)
Q Consensus 498 l~~ 500 (506)
+.+
T Consensus 430 ~~~ 432 (445)
T PRK08593 430 LEA 432 (445)
T ss_pred Hhc
Confidence 754
No 332
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.27 E-value=1.1e-08 Score=107.08 Aligned_cols=313 Identities=11% Similarity=0.013 Sum_probs=174.1
Q ss_pred HHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHh
Q 048643 132 ELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIV 211 (506)
Q Consensus 132 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~ 211 (506)
..+.++.+.|++++....+ ..+|+++||+||..|+..||... + ++.+|......|-...-+..+.
T Consensus 96 ~~~~~lae~L~~~~p~~~~-------~v~f~~SGsEA~e~AlklAr~~t-------g-r~~ii~~~~~yHG~t~~a~s~~ 160 (457)
T PRK05639 96 ERAIRVAEKLAEISPIENP-------KVLFGLSGSDAVDMAIKVSKFST-------R-RPWILAFIGAYHGQTLGATSVA 160 (457)
T ss_pred HHHHHHHHHHHhhCCCCcC-------EEEEeCchHHHHHHHHHHHHHhc-------C-CCeEEEECCCcCCccHHHHHHc
Confidence 3444566778887653222 57899999999999999999652 0 2234444455664444343333
Q ss_pred CC--------C--CCCeEEEecCCCCCc------ccCHH--------HHHHHHHHHHhcCCccEEEEEeccCCCCCcccC
Q 048643 212 GI--------D--LKNFRAIKTTKSSSY------GLSPD--------SLLTQINLDVEAGLVPLFLCATIGTTAITAVDP 267 (506)
Q Consensus 212 G~--------g--~~~v~~v~~~~~~~~------~~d~~--------~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp 267 (506)
|. + ..+++.+|....... .-|.+ .|++.+......+.....|++.-.....|.+-|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p 240 (457)
T PRK05639 161 AFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPDELINRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVP 240 (457)
T ss_pred CCCcccccCCCCCCCCceEeCCCccccccccccccCCHHHHHHHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCC
Confidence 32 1 123556665321000 01233 233333221111234556666554444566543
Q ss_pred ----hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCC
Q 048643 268 ----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTN 343 (506)
Q Consensus 268 ----l~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~ 343 (506)
+++|.++|++||+++++|+++.|+.....-+.....|+ ..|.+++ -|.++..++.|+++.++.- .+.+.
T Consensus 241 ~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv-~PDiv~~--gK~l~gG~pi~av~~~~~i--~~~~~-- 313 (457)
T PRK05639 241 PENFFKELKKLLDEHGILLVMDEVQTGIGRTGKWFASEWFEV-KPDLIIF--GKGVASGMGLSGVIGRKEL--MDLTS-- 313 (457)
T ss_pred CHHHHHHHHHHHHHcCCEEEEechhhccCcCchHHHHHhcCC-CCCEEEe--chhhcCCCcceeEEehHHH--HhhcC--
Confidence 89999999999999999999987533222112222245 5898884 6998766778888876532 12111
Q ss_pred ccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcC----CCCc----c-
Q 048643 344 PEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASD----KRVS----P- 414 (506)
Q Consensus 344 ~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~----~~~~----p- 414 (506)
..++. |. .+.+......-++|+.+..+ +.+++..++.++|.+.|+++ +-+. .
T Consensus 314 ~~~~~---------------T~-~g~p~~~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~~~VrG~G 374 (457)
T PRK05639 314 GSALL---------------TP-AANPVISAAAEATLEIIEEE---NLLKNALKVGEFIKKRLLEMKESFEVIGDVRGKG 374 (457)
T ss_pred CCccc---------------CC-CcCHHHHHHHHHHHHHHHHc---cHHHHHHHHHHHHHHHHHHHHHhCCCEEeeccce
Confidence 11111 11 11111223334445555443 34566666788888887663 2111 1
Q ss_pred ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHH
Q 048643 415 SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQ 494 (506)
Q Consensus 415 ~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~ 494 (506)
.++.+.+..+.. .. .......+.+.+.++|.+ +.+. ..+...+|+.. ....|++|||.++++|++.
T Consensus 375 l~~gve~~~~~~---------~~--~~~~~~~~~~~~~~~Gv~-~~~~-g~~~~~lr~~P-pl~it~~~id~~~~~l~~~ 440 (457)
T PRK05639 375 LMIGVEIVKENG---------KP--DPELTGKICWRAFELGLI-LPSY-GMFGNVIRITP-PLVITKEIAEKGLEIMERA 440 (457)
T ss_pred eEEEEEEecCCC---------CC--CHHHHHHHHHHHHhCCeE-Eeec-CCCCCEEEEeC-CCccCHHHHHHHHHHHHHH
Confidence 334444322100 00 023446778888888874 4332 11246899988 4678888999999999999
Q ss_pred HHHHH
Q 048643 495 LEAFL 499 (506)
Q Consensus 495 ~~~l~ 499 (506)
.+++.
T Consensus 441 l~~~~ 445 (457)
T PRK05639 441 IKDAL 445 (457)
T ss_pred HHHHH
Confidence 87764
No 333
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.27 E-value=2.4e-08 Score=103.88 Aligned_cols=316 Identities=12% Similarity=0.032 Sum_probs=172.2
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHH
Q 048643 131 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQI 210 (506)
Q Consensus 131 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~ 210 (506)
++.+.++.+.+++++.-+.. ...+|+++||+||..|+..||... | ++.+|......|-...-+..+
T Consensus 82 ~~~~~~la~~l~~~~p~~~~------~~v~f~~SGseA~e~AlklAr~~t-------g-r~~ii~~~~~yHG~t~~~~~~ 147 (425)
T PRK07495 82 YENYVRLAERLNALVPGDFA------KKTIFVTTGAEAVENAVKIARAAT-------G-RSAVIAFGGGFHGRTFMGMSL 147 (425)
T ss_pred CHHHHHHHHHHHHhCCCCCC------CEEEECCchHHHHHHHHHHHHHhh-------C-CCeEEEECCCcCCccHHHhhh
Confidence 34445566778887642110 157999999999999999998752 1 223444555556433223222
Q ss_pred hCC--------C--CCCeEEEecCCCCCcccC----HHHHHHHHHHHHhcCCccEEEEEeccCCCCCccc----ChhHHH
Q 048643 211 VGI--------D--LKNFRAIKTTKSSSYGLS----PDSLLTQINLDVEAGLVPLFLCATIGTTAITAVD----PLKPLC 272 (506)
Q Consensus 211 ~G~--------g--~~~v~~v~~~~~~~~~~d----~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~id----pl~~I~ 272 (506)
.|. + ...++.+|...+.+ .++ +++|++.++... .+..+.+|++.-.....|.+- -+++|.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~l~~~~~~~~-~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~ 225 (425)
T PRK07495 148 TGKVVPYKVGFGAMMPDVYHVPFPVELH-GVSVEQSLAALDKLFKADV-DPQRVAAIIIEPVQGEGGFYPAPAAFMKALR 225 (425)
T ss_pred cCCCcccccCCCCCCCCeEEecCCcccc-cccHHHHHHHHHHHHHhcc-CCCceEEEEECCccCCCCCccCCHHHHHHHH
Confidence 221 1 12455666543211 233 334455554211 123355566554444466443 389999
Q ss_pred HHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccc
Q 048643 273 DVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKAT 352 (506)
Q Consensus 273 ~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~ 352 (506)
++|++||+++++|.++.|+.....-+.....++ ..|.+++ -|.++..+..|+++.++. +.+.+... ...
T Consensus 226 ~l~~~~g~llI~DEv~tG~gr~G~~~a~~~~gv-~pDi~tl--sK~l~~G~pigav~~~~~--i~~~~~~~--~~~---- 294 (425)
T PRK07495 226 ELCDQHGILLIADEVQTGFARTGKLFAMEHHEV-AADLTTM--AKGLAGGFPLAAVTGRAE--IMDAPGPG--GLG---- 294 (425)
T ss_pred HHHHHcCCEEEEechhhcCCcCCCceeecccCC-CCCEEee--hhhhcCCccceEEEEcHH--HHhccCCC--CcC----
Confidence 999999999999999986533221111111122 4566555 588886677888887643 22233210 000
Q ss_pred cCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHc----CCCCc----c-ceEEEeecC
Q 048643 353 ESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVAS----DKRVS----P-SAVMDKLKP 423 (506)
Q Consensus 353 ~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~----~~~~~----p-~~v~f~~~~ 423 (506)
.+. .+.+.......++++.+..+. +.++..++.++|.++|++ .|.+. + .++.+.+.+
T Consensus 295 ----------~T~-~~~pl~~aaa~a~l~~l~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~iel~~ 360 (425)
T PRK07495 295 ----------GTY-GGNPLGIAAAHAVLDVIEEED---LCERANQLGNRLKQRLASLRETVPEIADIRGPGFMNAVEFND 360 (425)
T ss_pred ----------CCC-CCCHHHHHHHHHHHHHHHhch---HHHHHHHHHHHHHHHHHHHHhhCCCeeeeecCceEEEEEEec
Confidence 011 111112222235555554333 445555666666666654 33222 2 334444433
Q ss_pred CCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHc
Q 048643 424 KYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAFLT 500 (506)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l~~ 500 (506)
... ... .......+.+.+.++|.+. ...... ...+|+.. ....++++||.+++.|++..+++.+
T Consensus 361 ~~~--------~~~--~~~~~~~~~~~~~~~Gvl~-~~~g~~-~~~~r~~P-pl~it~~~id~~~~~l~~~l~~~~~ 424 (425)
T PRK07495 361 ADS--------GLP--SAEFANRVRLKALEKGLIL-LTCGVH-GNVIRFLA-PITIQDDVFAEALDILEASILEASA 424 (425)
T ss_pred CCC--------CCc--cHHHHHHHHHHHHHCCeEE-eecCCC-CCEEEEeC-CCccCHHHHHHHHHHHHHHHHHHhc
Confidence 210 000 0123567788888889754 322111 36799987 4678899999999999999887754
No 334
>PLN00144 acetylornithine transaminase
Probab=99.27 E-value=1.2e-08 Score=104.80 Aligned_cols=299 Identities=13% Similarity=0.022 Sum_probs=164.1
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccC----C-CCeEEEeCCCCchHHH
Q 048643 131 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGREN----I-SKLVVYGSDQTHCALQ 205 (506)
Q Consensus 131 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~----~-~~~~v~~s~~~H~s~~ 205 (506)
++.+.++.+.|+++.+.+ ..+++++||+|+..|+..||...-++....+ . +..+|.+....|-...
T Consensus 56 ~~~~~~la~~l~~~~~~~---------~v~f~~sGseA~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~ 126 (382)
T PLN00144 56 TIPQVELAKRLVASSFAD---------RVFFCNSGTEANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTL 126 (382)
T ss_pred CHHHHHHHHHHHhcCCCC---------eEEEeCCcHHHHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccH
Confidence 344455667777765432 5789999999999999999976422111000 0 1234555555664443
Q ss_pred HHHHHhCCC---------CCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc--cC--hhHHH
Q 048643 206 KAAQIVGID---------LKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV--DP--LKPLC 272 (506)
Q Consensus 206 ka~~~~G~g---------~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i--dp--l~~I~ 272 (506)
-+..+.+-. ...+..+|. -|+++|++.+.. ..+.+|++.-..++.|.+ ++ +++|.
T Consensus 127 ~~~s~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~~~~-----~~~aavi~eP~q~~gg~~~~~~~~~~~l~ 194 (382)
T PLN00144 127 GALALTSKEQYRTPFEPLMPGVTFVEY-------GNLEAARKLIQK-----GKTAAVFVEPVQGEGGIYPATKEFLQGLR 194 (382)
T ss_pred HHHhcCCCccccccCCCCCCCeEEeCC-------CCHHHHHHhcCC-----CCeEEEEEccccCCCCCccCCHHHHHHHH
Confidence 343333321 112333332 278899888742 134455554334443443 34 89999
Q ss_pred HHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccc
Q 048643 273 DVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKAT 352 (506)
Q Consensus 273 ~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~ 352 (506)
++|++||+++++|.++.++.....-+.....++ ..|.++ .-|.++..+..|+++.+.. +.+.+... .+.
T Consensus 195 ~l~~~~g~llI~DEv~tg~gr~g~~~~~~~~~~-~PDi~t--~sK~l~~G~pig~v~~~~~--~~~~~~~~-~~~----- 263 (382)
T PLN00144 195 ALCDEAGALLVFDEVQCGLGRTGYLWAHEAYGV-EPDIMT--LAKPLAGGLPIGAVLVTEK--VASAINPG-DHG----- 263 (382)
T ss_pred HHHHHcCCEEEEechhhCCCccchHhhhhhcCC-CCCEEE--ecccccCCcceEEEEEcHH--HHhccCCC-CCC-----
Confidence 999999999999999987643221111112334 356444 4699987788899888643 22222110 000
Q ss_pred cCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHH----HcCCCCc---c--ceEEEeecC
Q 048643 353 ESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLV----ASDKRVS---P--SAVMDKLKP 423 (506)
Q Consensus 353 ~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l----~~~~~~~---p--~~v~f~~~~ 423 (506)
.+. .+.+.....+.++|+.+-...+. ++..++.++|.+.+ .+.|.+. - .++.+.+..
T Consensus 264 ----------~T~-~~~pl~~aaa~a~l~~i~~~~~~---~~~~~~g~~l~~~l~~~~~~~~~~~~vrg~G~~~~l~l~~ 329 (382)
T PLN00144 264 ----------STF-AGGPLVCNAALAVLDKISKPGFL---ASVAKKGEYLRELLRRKLGGNPHVKEVRGVGLLVGIQLDV 329 (382)
T ss_pred ----------CCC-CCCHHHHHHHHHHHHHHhhchHH---HHHHHHHHHHHHHHHHHHhhCCCceeeecCceEEEEEecC
Confidence 011 11111223334444655433443 33444444444444 4444332 1 333333311
Q ss_pred CCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 048643 424 KYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAF 498 (506)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l 498 (506)
. ...+.+.+.+.|..+ .+.. ...++|++.. ...++++|+.+++.|+++..++
T Consensus 330 ~-------------------~~~~~~~~~~~Gv~i-~~~~--~~~~lrl~p~-~~~~~~~i~~~~~~l~~~l~~~ 381 (382)
T PLN00144 330 P-------------------AGPLVDACRDSGLLV-LTAG--KGDVVRLVPP-LVISEAELEQAVEILADCLPAL 381 (382)
T ss_pred c-------------------cHHHHHHHHHCCeEE-eecC--CCCEEEEeCC-CccCHHHHHHHHHHHHHHHHhc
Confidence 1 245677778888754 3321 1368999983 4366889999999999887653
No 335
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.27 E-value=2.5e-09 Score=108.11 Aligned_cols=325 Identities=13% Similarity=0.056 Sum_probs=174.2
Q ss_pred CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCC-CCeEEEeCCC
Q 048643 121 GFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENI-SKLVVYGSDQ 199 (506)
Q Consensus 121 ~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~-~~~~v~~s~~ 199 (506)
-..|..+|....||+. +++++|++ ..++|..|+.++..+..+.... .|.+.. .....+++..
T Consensus 67 DD~Y~gdpSv~~Lee~----vael~G~E---------~alpthqGRgaE~Il~~~~~~~----~g~e~g~~~~~~~v~hn 129 (467)
T TIGR02617 67 DEAYSGSRSYYALAES----VKNIFGYQ---------YTIPTHQGRGAEQIYIPVLIKK----REQEKGLDRSKMVAFSN 129 (467)
T ss_pred CcccccCchHHHHHHH----HHHHhCCc---------eEEECCCCchHHHHHHHhhccc----ccccccccccccccceE
Confidence 3568899999999866 56677876 3588888899988776554321 010000 0000133444
Q ss_pred CchHHH-HHHHHhCCCCCCeEEEecC--------CCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCC-CCcc---c
Q 048643 200 THCALQ-KAAQIVGIDLKNFRAIKTT--------KSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTA-ITAV---D 266 (506)
Q Consensus 200 ~H~s~~-ka~~~~G~g~~~v~~v~~~--------~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~-tG~i---d 266 (506)
.|+--. -.+.+.|. .++.++++ ...+|.||++.|+++|++.-. ...++ +..+..+|. -|.+ +
T Consensus 130 ~~fett~g~a~l~G~---~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~-~~i~~-v~~tlt~N~~GGqpvsle 204 (467)
T TIGR02617 130 YFFDTTQGHSQINGC---TARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGP-NNVPY-IVATITCNSAGGQPVSLA 204 (467)
T ss_pred EEEecchHHHHHcCc---eeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCC-CCcee-eeeeEEEecCCCEEeCHH
Confidence 555433 34567777 66665432 222479999999999986421 12333 333332233 3544 6
Q ss_pred ChhHHHHHHHHhCCEEEeecccccc-cccCc---------cchhhhc-CCCCCCeeEEcCccccCCCCcceEEEEeCc--
Q 048643 267 PLKPLCDVAKQFGIWVHVDAAYAGS-ACICP---------EFQHFID-GVEGADSFSLNAHKWFFTTLDCCCLWVKDP-- 333 (506)
Q Consensus 267 pl~~I~~ia~~~g~~lhVDaA~gg~-~~~~~---------~~~~~~~-gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~-- 333 (506)
.+.++.++|++||+.+|+|||--.- +.+.. ..+.... -.+.+|+++++..|.+++|.| |++..++.
T Consensus 205 nlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aDsvt~slsKglgApvG-g~Lag~d~~~ 283 (467)
T TIGR02617 205 NLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYADMLAMSAKKDAMVPMG-GLLCFKDDSF 283 (467)
T ss_pred HHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCCEEEEEcCCCCCCccc-ceEEecchhH
Confidence 6889999999999999999986442 22211 1111110 125899999999999999986 45556666
Q ss_pred -hhHHhhhcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCC
Q 048643 334 -SALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRV 412 (506)
Q Consensus 334 -~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~ 412 (506)
+.+.+.-.....|-. +..|+=--+|-..+++ ..|+ +.--..++++.....+||.++|.+. |+
T Consensus 284 ~~l~~~~~~~~i~~EG-----------f~tYGGlagrd~ea~a--~Gl~---e~~~~~yl~~ri~qv~yl~~~L~~~-Gv 346 (467)
T TIGR02617 284 FDVYTECRTLCVVQEG-----------FPTYGGLEGGAMERLA--VGLY---DGMNLDWLAYRINQVQYLVNGLEEI-GV 346 (467)
T ss_pred HHHHHHHHhhcccccC-----------CcCcCchhHHHHHHHH--hhhh---hcccHHHHHHHHHHHHHHHHHHHhC-CC
Confidence 333322111111111 1111100111111111 1222 1223456777788889999999886 54
Q ss_pred c---c-ceEEEe----ecCCCcccccccccchHHHHHHHHHHHHHHHHh-cCcEEEeeeeE-------------CCEEEE
Q 048643 413 S---P-SAVMDK----LKPKYENCHSQQLVTEEEAINEFNRELLESINA-SGKAYMTHAVC-------------GGIYAM 470 (506)
Q Consensus 413 ~---p-~~v~f~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~-------------~g~~~l 470 (506)
- + +--+|- +.|.- ..+ .--.+.|...|.. .|+=-+--+.+ ..-..+
T Consensus 347 pi~~~Gghav~iDa~~~lphi----------p~~--~fpa~al~~~ly~~~GiR~~e~G~~~~~rd~~~~~~~~~~~el~ 414 (467)
T TIGR02617 347 VCQQAGGHAAFVDAGKLLPHI----------PAD--QFPAHALACELYKVAGIRAVEIGSLLLGRDPKTGKQLPCPAELL 414 (467)
T ss_pred cEEecCccEEEEehhhhCCCC----------Chh--hCcHHHHHHHHHHHcCcceEeecceecccCCCCCccCCCcccee
Confidence 2 2 222221 11110 000 0012334444333 33311111111 113679
Q ss_pred EEEecCCCCCHHHHHHHHHHHHHHHHH
Q 048643 471 RFAVGATLTEERHVMVAWTMVQEQLEA 497 (506)
Q Consensus 471 R~~~~~~~tt~edi~~li~~l~~~~~~ 497 (506)
|+++-----|.+++|.+.++|..+.++
T Consensus 415 RlaipRrvyt~~h~d~v~~~~~~~~~~ 441 (467)
T TIGR02617 415 RLTIPRATYTQTHMDFIIEAFKHVKEN 441 (467)
T ss_pred eeccccccccHhHHHHHHHHHHHHHhh
Confidence 999843334667999999999887654
No 336
>PRK07678 aminotransferase; Validated
Probab=99.27 E-value=1.2e-08 Score=106.83 Aligned_cols=324 Identities=13% Similarity=0.072 Sum_probs=174.6
Q ss_pred HHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHh
Q 048643 132 ELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIV 211 (506)
Q Consensus 132 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~ 211 (506)
+.+.++.+.|+++++... ..+|+++||+||..|+..||.....+ |..+ ++.+|......|-...-+....
T Consensus 89 ~~~~~lae~l~~~~~~~~--------~v~f~~sGseA~e~AlklAr~~t~~~-g~~~-r~~ii~~~~~yHG~t~~als~~ 158 (451)
T PRK07678 89 EPAIKLAEKLNEWLGGEY--------VIFFSNSGSEANETAFKIARQYHAQK-GEPH-RYKFISRYRAYHGNSMGALAAT 158 (451)
T ss_pred HHHHHHHHHHHHhCCCCC--------EEEEeCCcHHHHHHHHHHHHHHHHhc-CCCC-CcEEEEECCCcCCccHHHhhcC
Confidence 344556677888765432 57899999999999999999754221 2111 2234444555564433333332
Q ss_pred CCC---------CCCeEEEecCCCCCcc-------cCH---HHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC----h
Q 048643 212 GID---------LKNFRAIKTTKSSSYG-------LSP---DSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP----L 268 (506)
Q Consensus 212 G~g---------~~~v~~v~~~~~~~~~-------~d~---~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp----l 268 (506)
|.. ...+..+|........ .|. +.+++.++.. .+..+.+|++.-.....|.+-| +
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~iAAvi~EPiqg~gG~~~~~~~fl 236 (451)
T PRK07678 159 GQAQRKYKYEPLAPGFLHVPPPDCYRMPGIESEDIYDLECVKEIDRVMTWE--LSETIAAVIMEPIITGGGVLMPPQDYM 236 (451)
T ss_pred CCcccccccCCCCCCCEEeCCCccccccccCChHHHHHHHHHHHHHHHHhc--CCCceEEEEEccccCCCCcccCCHHHH
Confidence 221 1133444432110000 112 2345555421 1234556666544444576654 8
Q ss_pred hHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCC-CcceEEEEeCchhHHhhhcCCccc-
Q 048643 269 KPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSALVSSLSTNPEY- 346 (506)
Q Consensus 269 ~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~y- 346 (506)
++|.++|++||+.+++|+.+.|+.....-+.....|+ ..|.+++ -|.++.. ++.|.+++++.- .+.+.....+
T Consensus 237 ~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~gv-~PDivt~--gK~lggG~~Pi~av~~~~~i--~~~~~~~~~~~ 311 (451)
T PRK07678 237 KAVKEICQKHGALLISDEVICGFGRTGKAFGFMNYGV-KPDIITM--AKGITSAYLPLSATAVKKEI--YEAFKGKGEYE 311 (451)
T ss_pred HHHHHHHHHcCCEEEEeehhhcCCcCchhHHHHhcCC-CCCEEEe--ecccccCCcceeEEEEcHHH--HHHHhccCccc
Confidence 9999999999999999999977644221111111344 5888887 5888765 468888887542 2334221110
Q ss_pred -cCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHc----CCCCc-c----ce
Q 048643 347 -LKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVAS----DKRVS-P----SA 416 (506)
Q Consensus 347 -l~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~----~~~~~-p----~~ 416 (506)
+... .|. .+.+.......++|+.+-.++ +.++..++.++|.+.|++ .+.+. . .+
T Consensus 312 ~~~h~------------~T~-~gnp~~~aaa~a~l~~l~~~~---~~~~~~~~g~~l~~~l~~~~~~~~~v~~vrg~Gl~ 375 (451)
T PRK07678 312 HFRHV------------NTF-GGNPAACALALKNLEIMENEN---LIERSAQLGELLLEQLKEELGEHPLVGDIRGKGLL 375 (451)
T ss_pred ccccC------------CCC-CcCHHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHHhcCCCEEEEEeeceE
Confidence 0000 011 111112233344455554443 455666667777766643 33221 1 33
Q ss_pred EEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeee---eECCEEEEEEEecCCCCCHHHHHHHHHHHHH
Q 048643 417 VMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHA---VCGGIYAMRFAVGATLTEERHVMVAWTMVQE 493 (506)
Q Consensus 417 v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~---~~~g~~~lR~~~~~~~tt~edi~~li~~l~~ 493 (506)
+.+.+...... ..+.+ .....++.+.+.++|.+. .+. +..+...+|++. ....|++||+++++++++
T Consensus 376 ~~i~~~~~~~~----~~~~~----~~~a~~i~~~l~~~Gv~~-~~~g~~v~~~~~~lrl~P-pl~it~~eid~~~~~l~~ 445 (451)
T PRK07678 376 VGIELVNDKET----KEPAD----NDKVASVVAACKEKGLII-GKNGDTVAGYNNVLTLSP-PLVISSEEIAFIVGTLKT 445 (451)
T ss_pred EEEEEecCCcc----cCcCc----hHHHHHHHHHHHHCCcEE-eecCccccCCCCEEEEEC-CCcCCHHHHHHHHHHHHH
Confidence 44444321000 00000 134567888888899753 321 123346799987 355688899999999999
Q ss_pred HHHHH
Q 048643 494 QLEAF 498 (506)
Q Consensus 494 ~~~~l 498 (506)
+.+++
T Consensus 446 ~l~~~ 450 (451)
T PRK07678 446 ALERI 450 (451)
T ss_pred HHHhc
Confidence 88765
No 337
>PRK07036 hypothetical protein; Provisional
Probab=99.26 E-value=2.5e-08 Score=104.76 Aligned_cols=321 Identities=10% Similarity=0.036 Sum_probs=174.2
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHH
Q 048643 131 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQI 210 (506)
Q Consensus 131 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~ 210 (506)
++.+.++.+.|++++.-+. ...+|+++||+|+..|+..||.....+ |..+ +..+|......|-...-+..+
T Consensus 94 ~~~~~~lae~L~~~~p~~~-------~~v~f~~sGseAve~AlklAr~~~~~~-g~t~-r~~Ii~~~~~YHG~t~~a~s~ 164 (466)
T PRK07036 94 NAPAAELAAKLAELAPGDL-------NHVFLTTGGSTAVDSALRFVHYYFNVR-GRPA-KKHIITRGDAYHGSTYLTASL 164 (466)
T ss_pred CHHHHHHHHHHHHhCCCCc-------CEEEEeCCchHHHHHHHHHHHHHHHhc-CCCC-ccEEEEEcCccCCccHhhhcc
Confidence 4455666777888753211 267999999999999999998753211 1111 223444454556433333332
Q ss_pred hCCC---------CCCeEEEecCCCC--CcccC--------HHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC----
Q 048643 211 VGID---------LKNFRAIKTTKSS--SYGLS--------PDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP---- 267 (506)
Q Consensus 211 ~G~g---------~~~v~~v~~~~~~--~~~~d--------~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp---- 267 (506)
.|.. ...+..+|..... ...+. .+.+++.+.. ..+..+.+|++.-.....|.+-|
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~iAavi~EPv~g~gG~~~p~~~y 242 (466)
T PRK07036 165 TGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEAAFCDFLVDEFEDKILS--LGADNIAAFIAEPILGSGGVIVPPPGY 242 (466)
T ss_pred cCCCcccccccCCCCCcEEecCCcccccccCCChHHHHHHHHHHHHHHHHH--cCCCceEEEEEeCCcCCCCCccCCHHH
Confidence 2221 0124444432100 01111 2344554432 12344666777665566677766
Q ss_pred hhHHHHHHHHhCCEEEeecccccccccCccchhh-hcCCCCCCeeEEcCccccCCCC-cceEEEEeCchhHHhhhcCC--
Q 048643 268 LKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHF-IDGVEGADSFSLNAHKWFFTTL-DCCCLWVKDPSALVSSLSTN-- 343 (506)
Q Consensus 268 l~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~-~~gi~~aDsi~~~~hK~l~~p~-~~g~~~~r~~~~l~~~~~~~-- 343 (506)
+++|.++|++||+.+++|+.+.|+.....-+... ..|+ ..|.+++ -|.++..+ ++|++++++.- .+.+...
T Consensus 243 l~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~~gv-~PDivt~--gK~l~gG~~Pi~av~~~~~i--~~~~~~~~~ 317 (466)
T PRK07036 243 HARMREICRRYDILYISDEVVTGFGRLGHFFASEAVFGI-QPDIITF--AKGLTSGYQPLGAVIISERL--LDVISGPNA 317 (466)
T ss_pred HHHHHHHHHHcCCEEEEeechhCCCcCchhhhhhhhcCC-CCCEEEE--ccccccCccccEEEEEcHHH--HHHHhcccC
Confidence 9999999999999999999997763322111111 1234 4788877 58887664 67888876532 2333211
Q ss_pred cc--ccCCccccCCCccCCCCccccCCCCCCchHHH---HHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc-----
Q 048643 344 PE--YLKNKATESKQVVDYKDWQITLSRRFRSLKLW---LVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS----- 413 (506)
Q Consensus 344 ~~--yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~---~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~----- 413 (506)
+. |... .+-...++... .+|+.+..+ +++++..++.++|.+.|+++..+.
T Consensus 318 ~~~~~~~~-----------------~T~~gnpl~~aaa~a~Le~i~~~---~l~~~~~~~g~~l~~~L~~l~~~~~v~~v 377 (466)
T PRK07036 318 KGNVFTHG-----------------FTYSGHPVACAAALKNIEIMERE---GLCEHVREVGPYFEERLASLRELPLVGDV 377 (466)
T ss_pred cCcccccC-----------------CCCCCCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHhccCCCEEEE
Confidence 00 1100 11112333333 344444333 456677778888888886542221
Q ss_pred --c-ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHH
Q 048643 414 --P-SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTM 490 (506)
Q Consensus 414 --p-~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~ 490 (506)
. .++.+.+....... .... . -......+.+.+.++|.+. .+. + ..+|++. ....|++||+++++.
T Consensus 378 rG~Gl~~~ve~~~~~~~~----~~~~-~-~~~~~~~~~~~~~~~Gvl~-~~~---~-~~~~l~P-pl~it~~~id~~~~~ 445 (466)
T PRK07036 378 RGDHLMACVECVADKGSK----ALLP-E-DIAIGQRIDRHCQERGLLV-RPL---E-HLCVLSP-PLIITRAQIDEIVAI 445 (466)
T ss_pred EeeceEEEEEEccCcccc----CCCC-c-hhHHHHHHHHHHHHCCcEE-eec---C-CEEEEeC-CCcCCHHHHHHHHHH
Confidence 1 44444443211000 0000 0 0134566778888889743 321 2 3577765 345688899999999
Q ss_pred HHHHHHHHH
Q 048643 491 VQEQLEAFL 499 (506)
Q Consensus 491 l~~~~~~l~ 499 (506)
++++.+++.
T Consensus 446 l~~al~~~~ 454 (466)
T PRK07036 446 LRAAIEETA 454 (466)
T ss_pred HHHHHHHHH
Confidence 988877764
No 338
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.26 E-value=1.4e-08 Score=105.67 Aligned_cols=310 Identities=11% Similarity=0.031 Sum_probs=168.4
Q ss_pred HHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhC
Q 048643 133 LENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVG 212 (506)
Q Consensus 133 lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G 212 (506)
.+.++.+.|++++..+.. ...+|+++||+|+..|+..||... . ++.+|......|-...-+..+.|
T Consensus 84 ~~~~la~~l~~~~p~~~~------~~~~f~~sGseA~e~AlklAr~~t-g-------r~~ii~~~~~yHG~t~~~~s~t~ 149 (421)
T PRK06777 84 SYVTLAERINALAPIDGP------AKTAFFTTGAEAVENAVKIARAYT-G-------RPGVIAFGGAFHGRTLLTMALTG 149 (421)
T ss_pred HHHHHHHHHHHhCCCCCC------ceEEEeCCcHHHHHHHHHHHHHhh-C-------CCeEEEEcCCcCCccHHHHhhcC
Confidence 334555777777643211 156888999999999999998752 1 22244444455644333333323
Q ss_pred C--------C--CCCeEEEecCCCCCc---ccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc-cC---hhHHHHHH
Q 048643 213 I--------D--LKNFRAIKTTKSSSY---GLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV-DP---LKPLCDVA 275 (506)
Q Consensus 213 ~--------g--~~~v~~v~~~~~~~~---~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i-dp---l~~I~~ia 275 (506)
. + ...+..+|......+ .-+++.|++.+++.. .+..+.+|++.-.....|.. -| +++|.++|
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~-~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc 228 (421)
T PRK06777 150 KVAPYKVGFGPFPGSIFHALYPNELHGVSVEEALSSVERLFKADI-APDQVAAILLEPIQGEGGFNVAPPEFMSALRTLC 228 (421)
T ss_pred CCcccccCCCCCCCCcEEcCCCccccCcCHHHHHHHHHHHHHhcc-CCCceEEEEECCccCCCCCccCCHHHHHHHHHHH
Confidence 1 0 112333433211000 123666777775321 12234556665545555643 33 99999999
Q ss_pred HHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCC
Q 048643 276 KQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESK 355 (506)
Q Consensus 276 ~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~ 355 (506)
++||+++++|.+|.|+......+.....++ ..|.++ .-|.++..+..|+++.++. +.+.+.... + .
T Consensus 229 ~~~g~llI~DEv~tg~gr~g~~~~~~~~~~-~pDiv~--~sK~l~~G~pigav~~~~~--i~~~~~~~~-~-~------- 294 (421)
T PRK06777 229 DEHGILLIADEVQTGFARTGKLFAMEYYDV-KPDLIT--MAKSLGGGMPISAVVGRAE--VMDAPAPGG-L-G------- 294 (421)
T ss_pred HHcCCEEEEechhhCCccCCchhhhhhcCC-CCCEEe--eehhhcCCCceEEEEEcHH--HHhccCCCC-C-C-------
Confidence 999999999999987533221111111122 467655 5698886677888887642 223332110 0 0
Q ss_pred CccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcC----CCCc---c--ceEEEeecCCCc
Q 048643 356 QVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASD----KRVS---P--SAVMDKLKPKYE 426 (506)
Q Consensus 356 ~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~----~~~~---p--~~v~f~~~~~~~ 426 (506)
.+. ++.+........+|..+.. .+++++..++.++|.+.|+++ |.+. + .++.+.+..+..
T Consensus 295 -------~T~-~~~p~~~aaa~a~L~~~~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G~~~~i~~~~~~~ 363 (421)
T PRK06777 295 -------GTY-AGNPLAVAAALAVLDVIAE---EKLCQRALILGAHLVEVLEKAKASCPAIVDIRARGSMVAVEFNDPQT 363 (421)
T ss_pred -------CCC-CcCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHHhCCCeEEecCceEEEEEEEecCcc
Confidence 011 1111122233334443322 356677777888888888763 3333 3 333333322100
Q ss_pred ccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 048643 427 NCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQL 495 (506)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~ 495 (506)
. ....++...+.+.+.+.|.+ +.++...+ .++|++. ....++++|+++++.|++..
T Consensus 364 -------~---~~~~~~~~~l~~~~~~~Gv~-i~~~~~~g-~~lr~~p-pl~i~~~~i~~~~~~l~~~l 419 (421)
T PRK06777 364 -------G---KPSPEFTRQYQRQALEEGLL-LLSCGVHG-NVIRFLY-PLTIPDAQFSKALNILTRLL 419 (421)
T ss_pred -------C---CccHHHHHHHHHHHHhCCeE-EeecCCCC-CEEEEeC-CCCCCHHHHHHHHHHHHHHH
Confidence 0 00123456777777888865 44432222 5899987 34678899999999998764
No 339
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.25 E-value=2.4e-08 Score=104.53 Aligned_cols=323 Identities=11% Similarity=0.035 Sum_probs=175.2
Q ss_pred HHHHHHHHHHHHHHcCCCC-ccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHH
Q 048643 131 TELENIVMDWLGQMLKLPK-SFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQ 209 (506)
Q Consensus 131 ~~lE~~~~~~la~l~g~~~-~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~ 209 (506)
++.+.++.+.|++++.-.. .. ...+++++||+||..|+..||... + ++.+|......|-...-+..
T Consensus 81 ~~~~~~lae~L~~~~p~~~~~~-----~~~f~~~sGsEA~e~AlklAr~~t-------g-r~~Ii~~~~~yHG~t~~~~s 147 (442)
T TIGR00709 81 TPLKDAFIEALLNIIPKRKMDY-----KLQFPGPSGADAVEAAIKLAKTYT-------G-RTNVISFSGGFHGMTIGALA 147 (442)
T ss_pred cHHHHHHHHHHHHhCCCcCCCc-----cEEEeCCCHHHHHHHHHHHHHHhc-------C-CCeEEEEcCCcCCchHHHHh
Confidence 4455566788888864221 11 023456899999999999999762 1 23345556566655444444
Q ss_pred HhCC---------CCCCeEEEecCCCCCccc--------CHHHHHHHHHHHHh----cCCccEEEEEeccCCCCCccc--
Q 048643 210 IVGI---------DLKNFRAIKTTKSSSYGL--------SPDSLLTQINLDVE----AGLVPLFLCATIGTTAITAVD-- 266 (506)
Q Consensus 210 ~~G~---------g~~~v~~v~~~~~~~~~~--------d~~~L~~~i~~~~~----~g~~p~~Vv~t~gtt~tG~id-- 266 (506)
..|. ....+..+|... ..+. +.+.+.+.+++... .......|++.-.....|.+-
T Consensus 148 ~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~ 225 (442)
T TIGR00709 148 VTGNLFAKNAVGMLMPGVQFMPYPH--EYRCPFGIGGEAGSNASIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAP 225 (442)
T ss_pred hcCChhhhccCCCCCCCcEEeCCCc--cccccccCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCccCC
Confidence 4331 011344454421 1122 22333332222211 112344555554444556552
Q ss_pred --ChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCc
Q 048643 267 --PLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNP 344 (506)
Q Consensus 267 --pl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~ 344 (506)
-+++|.++|++||++++.|..+.|+.....-+.....++ ..|.+++ -|.++..++.|+++.+++ + ..+. .
T Consensus 226 ~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~~--gK~l~~G~Pigav~~~~~--~-~~~~--~ 297 (442)
T TIGR00709 226 SEWLQKIREVTRKHDIKLILDEVQAGFGRSGTMFAFEHAGI-EPDFVVM--SKAVGGGLPLAVLLIAPE--F-DAWQ--P 297 (442)
T ss_pred HHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHHcCC-CCcEEEE--cccccCCcccEEEEEchH--H-hccC--C
Confidence 389999999999999999999987654322121111244 4788885 688887788899888754 2 2221 1
Q ss_pred cccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcC----CCCc----c-c
Q 048643 345 EYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASD----KRVS----P-S 415 (506)
Q Consensus 345 ~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~----~~~~----p-~ 415 (506)
.... .|. .+.+......-++|+.+..++ +.++..++.++|.+.|+++ |.+. . .
T Consensus 298 ~~~~--------------~T~-~gnpla~aaa~a~L~~i~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl 359 (442)
T TIGR00709 298 AGHT--------------GTF-RGNQLAMVTGTEALNYWKDDN---LAQNAQERGERITSFLDDMIKEHPCIGNVRGRGL 359 (442)
T ss_pred CcCC--------------CCC-CcCHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccce
Confidence 0000 011 111222233344455444443 4556666777777777653 2222 1 4
Q ss_pred eEEEeecCCC-cccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHH
Q 048643 416 AVMDKLKPKY-ENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQ 494 (506)
Q Consensus 416 ~v~f~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~ 494 (506)
++.+.+.... .+... ..... -......+...+.++|.+ +.+... ...++|+.. ....|+++|+.+++++++.
T Consensus 360 ~~~ie~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~Gvl-~~~~~~-~~~~l~~~P-pl~it~~ei~~~~~~l~~~ 432 (442)
T TIGR00709 360 MQGIMIVDERQSKDAT---GAYPR-DCELAAAIQGACFENGLL-LETGGR-EGEVFRLLC-PITIDQEECEEGISRFKQA 432 (442)
T ss_pred EEEEEEccCccccccc---ccCCc-chHHHHHHHHHHHHCCeE-EeecCC-CCCEEEEEC-CCCCCHHHHHHHHHHHHHH
Confidence 4444443210 00000 00000 012456677788888864 433221 236789987 5678899999999999999
Q ss_pred HHHHHcc
Q 048643 495 LEAFLTT 501 (506)
Q Consensus 495 ~~~l~~~ 501 (506)
.+++.++
T Consensus 433 l~~~~~~ 439 (442)
T TIGR00709 433 VEEALAE 439 (442)
T ss_pred HHHHHHH
Confidence 8887654
No 340
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.25 E-value=3.7e-08 Score=102.41 Aligned_cols=309 Identities=11% Similarity=0.036 Sum_probs=171.6
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHH
Q 048643 131 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQI 210 (506)
Q Consensus 131 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~ 210 (506)
++.+.++.+.|+++...... ...+|+++||+|+..|+..||... | ++.+|......|-...-+..+
T Consensus 82 ~~~~~~la~~l~~~~p~~~~------~~~~f~~sGseA~e~AlklAr~~t-------g-r~~ii~~~~~yHG~t~~~~s~ 147 (421)
T PRK09792 82 YESYVTLAEKINALAPVSGQ------AKTAFFTTGAEAVENAVKIARAHT-------G-RPGVIAFSGGFHGRTYMTMAL 147 (421)
T ss_pred CHHHHHHHHHHHHhCCCCCC------ceEEEeCChHHHHHHHHHHHHHhc-------C-CCeEEEECCCcCCccHHHHhh
Confidence 34445566778887643211 156888999999999999999641 1 222444454556433323332
Q ss_pred hCC--------C--CCCeEEEecCCCCCccc----CHHHHHHHHHHHHhcCCccEEEEEeccCCCCCccc-C---hhHHH
Q 048643 211 VGI--------D--LKNFRAIKTTKSSSYGL----SPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVD-P---LKPLC 272 (506)
Q Consensus 211 ~G~--------g--~~~v~~v~~~~~~~~~~----d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~id-p---l~~I~ 272 (506)
.|. + ...++.+|...+.+ .+ +++.|++.+++.. ....+.+|++.-...++|.+- | +++|.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~v~~p~~~~-~~~~~~~~~~l~~~~~~~~-~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~ 225 (421)
T PRK09792 148 TGKVAPYKIGFGPFPGSVYHVPYPSDLH-GISTQDSLDAIERLFKSDI-EAKQVAAIIFEPVQGEGGFNVAPKELVAAIR 225 (421)
T ss_pred cCCCcccccCCCCCCCCcEEcCCCcccc-cccHHHHHHHHHHHHHhcc-CCCceEEEEEccccCCCCCccCCHHHHHHHH
Confidence 221 1 11345555432111 12 3467777775421 122355667766666777653 5 89999
Q ss_pred HHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccc
Q 048643 273 DVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKAT 352 (506)
Q Consensus 273 ~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~ 352 (506)
++|++||+++++|..+.|+......+.....++ ..|.++ .-|.++..+..|+++.++. +.+.+... ..
T Consensus 226 ~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~~-~pDi~t--~gK~l~~G~pigav~~~~~--i~~~~~~~--~~----- 293 (421)
T PRK09792 226 RLCDEHGIVMIADEVQSGFARTGKLFAMDHYAD-KPDLMT--MAKSLAGGMPLSGVVGNAN--IMDAPAPG--GL----- 293 (421)
T ss_pred HHHHHcCCEEEEeccccCCCCCCchhHHHhcCC-CCcEEE--eehhhcCCCceEEEEEcHH--HHhccCCC--Cc-----
Confidence 999999999999999987643221111111122 467544 4699987688888877543 22222110 00
Q ss_pred cCCCccCCCCccccCCCCCCchHHH---HHHHHhchhHHHHHHHHHHHHHHHHHHHHHc----CCCCc-c----ceEEEe
Q 048643 353 ESKQVVDYKDWQITLSRRFRSLKLW---LVIRNYGVANLRHFLRSHVNMAKLFERLVAS----DKRVS-P----SAVMDK 420 (506)
Q Consensus 353 ~~~~~~~~~~~~~~~sr~~~al~~~---~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~----~~~~~-p----~~v~f~ 420 (506)
..+....++... ++++.+..+ +++++..++.+++.+.|++ .|.+. + .++.+.
T Consensus 294 -------------~~T~~gnpl~~aaa~a~l~~l~~~---~~~~~~~~~g~~l~~~l~~l~~~~p~v~~vrG~Gl~~~ie 357 (421)
T PRK09792 294 -------------GGTYAGNPLAVAAAHAVLNIIDKE---SLCERANQLGQRLKNTLIDAKESVPAIAAVRGLGSMIAAE 357 (421)
T ss_pred -------------CCCCCCCHHHHHHHHHHHHHHHhh---hHHHHHHHHHHHHHHHHHHHHHhCCCcceecccceEEEEE
Confidence 011112233333 455555333 3555556667777666654 34333 3 344444
Q ss_pred ecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 048643 421 LKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLE 496 (506)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~ 496 (506)
+.+... ... ......++.+.+.++|.+. .+.. ....++|+.. ....++++|+++++.|.++..
T Consensus 358 ~~~~~~--------~~~--~~~~~~~l~~~~~~~Gv~i-~~~g-~~~~~irl~P-~l~i~~~ei~~~~~~l~~~l~ 420 (421)
T PRK09792 358 FNDPQT--------GEP--SAAIAQKIQQRALAQGLLL-LTCG-AYGNVIRFLY-PLTIPDAQFDAAMKILQDALS 420 (421)
T ss_pred ecCCcc--------CCc--chHHHHHHHHHHHHCCcEE-eecC-CCCCEEEEeC-CCcCCHHHHHHHHHHHHHHHh
Confidence 432200 000 0123577888888899754 2211 1136899987 344788899999999988753
No 341
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=99.24 E-value=8.7e-09 Score=101.78 Aligned_cols=321 Identities=12% Similarity=0.123 Sum_probs=193.1
Q ss_pred ccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCch
Q 048643 123 NWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHC 202 (506)
Q Consensus 123 ~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~ 202 (506)
.|.++.+..++-..+.+.....+..|... ....++|+|.|.+...++.++.+ .+..|++...+..
T Consensus 95 QYg~s~G~peLl~fik~h~~~~ih~p~~~----~wdiiit~G~t~~l~~~l~~~~N-----------~gd~vlie~~ty~ 159 (472)
T KOG0634|consen 95 QYGQSSGIPELLLFIKDHNRPTIHAPPYK----NWDIIITNGNTDGLFKVLRTLIN-----------RGDHVLIEEYTYP 159 (472)
T ss_pred ccccccCcHHHHHHHHHhccccccCCCCC----CceEEEecCCchHHHHHHHHhhc-----------CCCceEEecccch
Confidence 45556666666655555444444454432 13789999999999999988877 5678999999999
Q ss_pred HHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhc--C-CccEE-EEEeccCCCCCcccCh---hHHHHHH
Q 048643 203 ALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEA--G-LVPLF-LCATIGTTAITAVDPL---KPLCDVA 275 (506)
Q Consensus 203 s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~--g-~~p~~-Vv~t~gtt~tG~idpl---~~I~~ia 275 (506)
+...+++.+|+ +++.|+.|.+ .|++|.|++.+..-... | ..|-+ -..-.|.|+||.--.+ ++|.++|
T Consensus 160 ~AL~s~~a~gv---~~ipv~md~~---Gi~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LA 233 (472)
T KOG0634|consen 160 SALQSMEALGV---KIIPVKMDQD---GIDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLA 233 (472)
T ss_pred HHHHhccccCc---eEEeccccCC---CCCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHH
Confidence 99999999999 9999988753 79999999998754322 1 23532 2223478999988665 7899999
Q ss_pred HHhCCEEEeecccccccccC---------ccch------hhhcCC---------CCCCeeEEcCccccCCCCcceEEEEe
Q 048643 276 KQFGIWVHVDAAYAGSACIC---------PEFQ------HFIDGV---------EGADSFSLNAHKWFFTTLDCCCLWVK 331 (506)
Q Consensus 276 ~~~g~~lhVDaA~gg~~~~~---------~~~~------~~~~gi---------~~aDsi~~~~hK~l~~p~~~g~~~~r 331 (506)
++|++.++.|..|.-..+-. +.+. .++... -+.|| +.|.+......|++-..
T Consensus 234 rKyDfLIVeDdpYy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dS----FSKiiaPGlRlG~it~~ 309 (472)
T KOG0634|consen 234 RKYDFLIVEDDPYYFLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDS----FSKIIAPGLRLGWITGN 309 (472)
T ss_pred HHcCEEEEecCccceeeccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccc----hhhhhcCcceeEEeecC
Confidence 99999999999986443321 0000 111110 12233 33666555555554332
Q ss_pred CchhHHhhhcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHH----HHHHHHHHHHHH
Q 048643 332 DPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSH----VNMAKLFERLVA 407 (506)
Q Consensus 332 ~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~----~~~a~~l~~~l~ 407 (506)
. ..+.+.+. ..+.+.+.-..+...-++..|+.+|.+|+.+.+.+. ...+..+...+.
T Consensus 310 ~-~~l~ril~------------------~ae~~t~~pSg~sq~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~ 370 (472)
T KOG0634|consen 310 S-LFLKRILD------------------LAEVATSGPSGFSQGIVYAMLKRWGQEGFLRWIQHLRSSYTERRNALLSALD 370 (472)
T ss_pred H-HHHHHHhh------------------hcceeecCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 12222111 111122222224456678899999998877666654 345556666665
Q ss_pred c-CCCC--c---c---ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeE------C-CEEEEE
Q 048643 408 S-DKRV--S---P---SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVC------G-GIYAMR 471 (506)
Q Consensus 408 ~-~~~~--~---p---~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~------~-g~~~lR 471 (506)
+ +|.- + | -.+.+++.-.. -......++.-+.+...+.+.|+.++.+..+ . ++-++|
T Consensus 371 kylp~~~~~~~~P~aGmFiwv~i~~~~--------~~~~~~i~q~~e~i~~~~vk~gV~~v~G~~F~v~p~~s~~kiffR 442 (472)
T KOG0634|consen 371 KYLPKSVCEYHPPKAGMFIWVEIPYIN--------FDTKKSINQIEEIIFIKAVKNGVKLVCGSWFMVDPESSWSKIFFR 442 (472)
T ss_pred HhCCCCeeEEecCCcceEEEEEecccc--------cccccchHHHHHHHHHHHHHCCeEEecCceeEEcCccCCCcceEE
Confidence 4 4442 3 4 33344443000 0011223455566777788888866555422 1 234999
Q ss_pred EEecCCCCCHHHHHHHHHHHHHHHHH
Q 048643 472 FAVGATLTEERHVMVAWTMVQEQLEA 497 (506)
Q Consensus 472 ~~~~~~~tt~edi~~li~~l~~~~~~ 497 (506)
+++.. ...++++..++.+....++
T Consensus 443 ls~a~--a~~e~l~~g~~rf~~~ike 466 (472)
T KOG0634|consen 443 LSIAF--AEPEKLDEGIERFGSVIKE 466 (472)
T ss_pred EEeec--CCHHHHHHHHHHHHHHHHH
Confidence 99953 3555666666655555444
No 342
>PRK07481 hypothetical protein; Provisional
Probab=99.24 E-value=4.3e-08 Score=102.70 Aligned_cols=327 Identities=11% Similarity=0.031 Sum_probs=172.2
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHH
Q 048643 131 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQI 210 (506)
Q Consensus 131 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~ 210 (506)
+..+.++.+.|+++++-+ .. ...+|+++||+|+..|+..||.....+ |..+ +..+|......|-...-+..+
T Consensus 85 ~~~~~~lae~L~~~~~~~-~~-----~~v~f~~sGsEAve~AlklAr~~~~~~-g~~~-r~~ii~~~~~yHG~t~ga~s~ 156 (449)
T PRK07481 85 HPRAIELSYELIDMFAPE-GM-----RRVFFSSGGSDSVETALKLARQYWKVR-GQPE-RTKFISLKQGYHGTHFGGASV 156 (449)
T ss_pred CHHHHHHHHHHHHhcCCC-CC-----CEEEEcCchHHHHHHHHHHHHHHHHhc-CCCC-CcEEEEECCCcCCcchhhhcc
Confidence 345556677888886421 11 257899999999999999999754211 2111 233445555556433322222
Q ss_pred hCCC---------CCCeEEEecCCCCC--cc-cCHHHHHHHHHHH----H--hcCCccEEEEEeccCCCCCcccC----h
Q 048643 211 VGID---------LKNFRAIKTTKSSS--YG-LSPDSLLTQINLD----V--EAGLVPLFLCATIGTTAITAVDP----L 268 (506)
Q Consensus 211 ~G~g---------~~~v~~v~~~~~~~--~~-~d~~~L~~~i~~~----~--~~g~~p~~Vv~t~gtt~tG~idp----l 268 (506)
.|-. ...+..++....-. +. -|++.+++.+.+. . ..+..+.+|++.-.....|.+-| +
T Consensus 157 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl 236 (449)
T PRK07481 157 NGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQDPEELARICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFW 236 (449)
T ss_pred CCCcccccccCCCCCCCEEeCCCcccccccCCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHH
Confidence 2210 11234444321000 11 2455554433211 1 12234566666655555676644 8
Q ss_pred hHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCC-cceEEEEeCchhHHhhhcCCcccc
Q 048643 269 KPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTL-DCCCLWVKDPSALVSSLSTNPEYL 347 (506)
Q Consensus 269 ~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~-~~g~~~~r~~~~l~~~~~~~~~yl 347 (506)
++|.++|++||+.+++|+.+.|+.....-+.....++ ..|.+++ -|.++..+ +.|++++++. +.+.+......-
T Consensus 237 ~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~~--gKgl~gG~~Pi~av~~~~~--i~~~~~~~~~~~ 311 (449)
T PRK07481 237 PLVREVCDRHGILLIADEVVTGFGRTGSWFGSRGWGV-KPDIMCL--AKGITSGYVPLGATMVNAR--IADAFEANADFG 311 (449)
T ss_pred HHHHHHHHHcCCEEEEeehhhCcCcCchhhHhhhcCC-CCCEEEE--eecccCCCcCceEEEEcHH--HHHHHhccCccc
Confidence 9999999999999999999877643222111112244 5788887 58887653 6788888753 223332111000
Q ss_pred CCccccCCCccCCCCccccCCCCCCch---HHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcC----CCCc-c----c
Q 048643 348 KNKATESKQVVDYKDWQITLSRRFRSL---KLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASD----KRVS-P----S 415 (506)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~sr~~~al---~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~----~~~~-p----~ 415 (506)
.. + ....+-...++ ....+|..+.++ +.+++..++.++|.+.|+++ |-+. . .
T Consensus 312 --------~~--~---~h~~T~~gnpl~~aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl 375 (449)
T PRK07481 312 --------GA--I---MHGYTYSGHPVACAAALATLDIVVRE---DLPANAAKRGAYLLEGLQPLKERFELVGDVRGKGL 375 (449)
T ss_pred --------cc--c---ccCCCCCCCHHHHHHHHHHHHHHHhh---hHHHHHHHHHHHHHHHHHHHhhcCCCeEEEeecce
Confidence 00 0 00011112333 334445544333 34566666777777777653 2111 1 3
Q ss_pred eEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 048643 416 AVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQL 495 (506)
Q Consensus 416 ~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~ 495 (506)
++.+.+..... .+ ...+ .......++.+++.++|.+ +.+. + ..+|++. ....|++|||.+++.|++..
T Consensus 376 m~gi~l~~~~~---~~-~~~~--~~~~~~~~~~~~~~~~Gvl-~~~~---g-~~i~l~P-pl~it~~eid~~~~~l~~~l 443 (449)
T PRK07481 376 MLALDLVADKA---TR-EPID--PSKGYANAVADVARENGVL-VRPS---G-TKIILSP-PLVIQREDVDRIVDALDAGL 443 (449)
T ss_pred EEEEEeccccc---cc-CCCC--chhHHHHHHHHHHHhCCeE-EEec---C-CEEEEEC-CCCCCHHHHHHHHHHHHHHH
Confidence 33344322100 00 0000 0023456677788888974 3322 2 2478765 23468899999999999998
Q ss_pred HHH
Q 048643 496 EAF 498 (506)
Q Consensus 496 ~~l 498 (506)
+++
T Consensus 444 ~~~ 446 (449)
T PRK07481 444 SAV 446 (449)
T ss_pred Hhc
Confidence 765
No 343
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.24 E-value=5.1e-08 Score=102.09 Aligned_cols=318 Identities=12% Similarity=0.075 Sum_probs=176.4
Q ss_pred HHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHh
Q 048643 132 ELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIV 211 (506)
Q Consensus 132 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~ 211 (506)
....++.+.|+++++-... ..+|+++||+|+..|+..||.....+ +..+ +..+|......|-...-+..+.
T Consensus 97 ~~~~~lAe~L~~~~p~~~~-------~v~f~~sGseAve~AlKlA~~~~~~r-g~~~-r~~Ii~~~~~yHG~t~gals~~ 167 (453)
T PRK06943 97 EPAIELAERLAALTGGTLG-------HAFFASDGASAVEIALKMSFHAWRNR-GRGD-KREFVCLANGYHGETIGALGVT 167 (453)
T ss_pred HHHHHHHHHHHHhCCCCCC-------EEEEeCCCHHHHHHHHHHHHHHHHHh-CCCC-CCEEEEECCCcCCCcHHhhccc
Confidence 3445566778887653212 57899999999999999998754322 2111 2334555555564333233222
Q ss_pred CCC---------CCCeEEEecCCCCCc----------ccCHHHHHHHHHHHHhcCCccEEEEEec-cCCCCCcccC----
Q 048643 212 GID---------LKNFRAIKTTKSSSY----------GLSPDSLLTQINLDVEAGLVPLFLCATI-GTTAITAVDP---- 267 (506)
Q Consensus 212 G~g---------~~~v~~v~~~~~~~~----------~~d~~~L~~~i~~~~~~g~~p~~Vv~t~-gtt~tG~idp---- 267 (506)
|.. ...+..+|....... .-+++.|++.++. .+..+..|++.- .....|.+-|
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~~~iAAviiEPvvqg~gG~~~~~~~y 244 (453)
T PRK06943 168 DVALFKDAYDPLIRHAHVVASPDARGARPGETAADVAARALADVRRLFAE---RAGKIAALIVEPLVQCAAGMAMHDPSY 244 (453)
T ss_pred CChhhhcccccCCCCCEEECCCCccccccCCCHHHHHHHHHHHHHHHHHh---CCCceEEEEEeccccccCCcccCCHHH
Confidence 210 012344543211000 0134667777653 223455555543 1344565532
Q ss_pred hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCC-cceEEEEeCchhHHhhhcCCccc
Q 048643 268 LKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTL-DCCCLWVKDPSALVSSLSTNPEY 346 (506)
Q Consensus 268 l~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~-~~g~~~~r~~~~l~~~~~~~~~y 346 (506)
+++|.++|++||+.+++|+.+.|+.....-+.....|+ ..|.+++ -|.++..+ +.|.+++++.- .+.+.....
T Consensus 245 l~~lr~lc~~~gillI~DEV~TG~GRtG~~fa~~~~gv-~PDivt~--gKgl~gG~~Pi~av~~~~ei--~~~~~~~~~- 318 (453)
T PRK06943 245 LRGLRALCDRYGVHLIADEIAVGCGRTGTFFACEQAGV-WPDFLCL--SKGISGGYLPLSLVLSRDAI--FAAFYDDDV- 318 (453)
T ss_pred HHHHHHHHHHcCCEEEeechhhCCCCCcchhHHHhCCC-CCCeEee--ehhhccCcccceEEEEcHHH--HHhhcccCc-
Confidence 89999999999999999999877644332222222245 5899988 58887664 68888887542 233321100
Q ss_pred cCCccccCCCccCCCCccccCCCCCCchHHHH---HHHHhchhHHHHHHHHHHHHHHHHHHHHHcC---CCCc----c-c
Q 048643 347 LKNKATESKQVVDYKDWQITLSRRFRSLKLWL---VIRNYGVANLRHFLRSHVNMAKLFERLVASD---KRVS----P-S 415 (506)
Q Consensus 347 l~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~---~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~---~~~~----p-~ 415 (506)
... +....+-...++..-+ +|..+-++ +++++..++.++|.+.|+++ +.+. - .
T Consensus 319 -------~~~------~~~~~T~~gnpl~~aaa~a~L~~i~~~---~l~~~~~~~G~~l~~~L~~l~~~~~v~~vrG~Gl 382 (453)
T PRK06943 319 -------TRG------FLHSHSYTGNPLACRAALATLDLFAED---DVLARNARKSARLRAALAPLAAHPQVRHLRQRGT 382 (453)
T ss_pred -------cCC------ccCCCCCCCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHhcCCCEEeEecccc
Confidence 000 0001111123343333 34444333 35566667777777777654 3332 1 3
Q ss_pred eEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 048643 416 AVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQL 495 (506)
Q Consensus 416 ~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~ 495 (506)
++.+.+.... + .......++.+.+.++|.+. .+. + ..+|++. ....|++||+++++.|++..
T Consensus 383 ~~gvel~~~~----------~--~~~~~~~~i~~~~~~~Gll~-~~~---g-~~l~~~P-pl~it~~eid~~~~~l~~al 444 (453)
T PRK06943 383 IFAFDVALDG----------D--AARTFSRRFFEAALERELLL-RPI---G-TTVYLMP-PYVLDDDEIAWLAERTRATL 444 (453)
T ss_pred EEEEEEccCC----------C--cchHHHHHHHHHHHHCCcEE-Eec---C-CEEEEeC-CCcCCHHHHHHHHHHHHHHH
Confidence 3334333110 0 00234567788888889753 322 2 3589886 45678899999999999998
Q ss_pred HHHHcc
Q 048643 496 EAFLTT 501 (506)
Q Consensus 496 ~~l~~~ 501 (506)
+++..+
T Consensus 445 ~~~~~~ 450 (453)
T PRK06943 445 DATLAE 450 (453)
T ss_pred HHHHHh
Confidence 887543
No 344
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.24 E-value=2e-08 Score=105.27 Aligned_cols=310 Identities=13% Similarity=0.056 Sum_probs=172.5
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHH
Q 048643 131 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQI 210 (506)
Q Consensus 131 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~ 210 (506)
++.+.++.+.|+++++-..+ ..+|+++||+|+..|+..||... + ++.+|......|-...-+..+
T Consensus 112 ~~~~~~lae~L~~~~p~~~~-------~v~f~~sGseAve~AlklAr~~t-------g-r~~ii~~~~~yHG~t~~a~s~ 176 (459)
T PRK06082 112 NETAIECAEKLTEIAGGELN-------RVLFAPGGTSAIGMALKLARHIT-------G-NFKVVSLWDSFHGASLDAISV 176 (459)
T ss_pred CHHHHHHHHHHHHhCCCCCC-------EEEECCCcHHHHHHHHHHHHHhc-------C-CCEEEEEeCCCcCccHHHHhh
Confidence 45566677788888753222 57999999999999999998651 1 233444555566554444443
Q ss_pred hCCC---------CCCeEEEecCCCCC--c-cc------CHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC---hh
Q 048643 211 VGID---------LKNFRAIKTTKSSS--Y-GL------SPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP---LK 269 (506)
Q Consensus 211 ~G~g---------~~~v~~v~~~~~~~--~-~~------d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp---l~ 269 (506)
.|.. ...+..+|...... + .. +++.|++.+++ .+ ...+|++.-.....+.+-| ++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~---~~-~vAavIvEPv~g~g~~~~~~~yl~ 252 (459)
T PRK06082 177 GGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEYVIEK---EG-GIGAFIAEAVRNTDVQVPSKAYWK 252 (459)
T ss_pred cCCcccccCCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHHHHHHhc---CC-CEEEEEECCccCCCCcCCCHHHHH
Confidence 3320 01234444221000 0 01 13456666653 12 3445555433322233444 89
Q ss_pred HHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCC-cceEEEEeCchhHHhhhcCCccccC
Q 048643 270 PLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTL-DCCCLWVKDPSALVSSLSTNPEYLK 348 (506)
Q Consensus 270 ~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~-~~g~~~~r~~~~l~~~~~~~~~yl~ 348 (506)
+|.++|++||+.+++|+++.|+.....-+.....|+ ..|.+++ -|.++..+ +.|.++.++.- ...+.. .+.
T Consensus 253 ~lr~lc~~~g~llI~DEV~tG~GRtG~~fa~e~~gv-~PDiv~~--gKgl~gG~~P~~av~~~~~i--~~~~~~--~~~- 324 (459)
T PRK06082 253 RVREICDKHNVLLIIDEIPNGMGRTGEWFTHQAYGI-EPDILCI--GKGLGGGLVPIAAMITKDKY--NTAAQI--SLG- 324 (459)
T ss_pred HHHHHHHHcCCEEEEechhhCCCccchhhHhHhhCC-CCCEEEe--cccccCCCCcceEEEEcHHH--HhhccC--CCC-
Confidence 999999999999999999987543322212122345 5888874 69988664 68888887542 122210 000
Q ss_pred CccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcC----CCCc----c-ceEEE
Q 048643 349 NKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASD----KRVS----P-SAVMD 419 (506)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~----~~~~----p-~~v~f 419 (506)
..|.. +.+........+|+.+-.+ +++++..++.++|.+.|+++ |.+. . .++.+
T Consensus 325 -------------~~T~~-gnpl~~aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~v 387 (459)
T PRK06082 325 -------------HYTHE-KSPLGCAAALATIEVIEQE---GLLEKVKADSQFMRERLLEMKAKYPLIGDVRGIGLLWGV 387 (459)
T ss_pred -------------CCCCC-cCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHhhCCCeeeeeeccceeEE
Confidence 00111 1111223334445555333 35667777888888888653 2221 1 34444
Q ss_pred eecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 048643 420 KLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAF 498 (506)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l 498 (506)
.+..... ...........+...+.++|.+. .+. +..++|++. ....+++||+++++++++...++
T Consensus 388 e~~~~~~---------~~~~~~~~~~~~~~~~~~~Gvl~-~~~---~~~~i~~~P-pl~it~~eid~~~~~l~~~l~~~ 452 (459)
T PRK06082 388 ELVTDRH---------TKERAYDEAEAVLYRCLNNGLSF-KVS---QGNVIQLSP-PLIITREELTQALAILEEAIAKI 452 (459)
T ss_pred EEccCcc---------ccCccHHHHHHHHHHHHhCCCEE-Eec---CCCEEEEeC-CCccCHHHHHHHHHHHHHHHHHH
Confidence 4432100 00000123456777888889753 332 236789886 34568889999999999998877
No 345
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.23 E-value=1.8e-08 Score=104.99 Aligned_cols=306 Identities=12% Similarity=0.040 Sum_probs=171.3
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHH
Q 048643 131 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQI 210 (506)
Q Consensus 131 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~ 210 (506)
+..+.++.+.|++++.- . ...+|+++||+|+..|+..||... | ++.+|......|-...-+...
T Consensus 92 ~~~~~~la~~l~~~~p~-~-------~~v~f~~sGseA~e~AlklAr~~t-------g-r~~ii~~~~~yHG~t~~~~~~ 155 (428)
T PRK12389 92 TELEIEFAKMLKEAIPS-L-------EKVRFVNSGTEAVMTTIRVARAYT-------G-RTKIIKFAGCYHGHSDLVLVA 155 (428)
T ss_pred CHHHHHHHHHHHHhCCC-C-------cEEEEeCCHHHHHHHHHHHHHHhh-------C-CCEEEEECCCcCCChHHHHHh
Confidence 34456667778777641 1 167899999999999999999862 1 233444555566443333333
Q ss_pred hCCCC----------------CCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC----hhH
Q 048643 211 VGIDL----------------KNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP----LKP 270 (506)
Q Consensus 211 ~G~g~----------------~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp----l~~ 270 (506)
.|.+. .++..+|. -|++.|++.+++. +..+.+|++.-.....|.+-| +++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~---~~~vaavi~EPv~g~~G~~~p~~~yl~~ 225 (428)
T PRK12389 156 AGSGPSTLGTPDSAGVPKSIAQEVITVPF-------NDIEALKEALDKW---GDEVAAVLVEPIVGNFGIVEPKPGFLEA 225 (428)
T ss_pred cCCcccccCCCCCCCCCCcccCceEEcCC-------CCHHHHHHHHHhc---CCcEEEEEEeCCCCCCCCcCCCHHHHHH
Confidence 32110 12222221 2789999888643 233556666655666788877 999
Q ss_pred HHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCC-ccccCC
Q 048643 271 LCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTN-PEYLKN 349 (506)
Q Consensus 271 I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~-~~yl~~ 349 (506)
|.++|++||+.+++|+++.|+ ...........|+ ..|.+++ -|.++..++.|.++.++. +.+.+... +.+...
T Consensus 226 l~~lc~~~g~llI~DEV~tG~-Rt~~~~a~~~~gv-~PDivt~--gK~lggG~Pi~av~~~~~--i~~~~~~~~~~~~~~ 299 (428)
T PRK12389 226 VNELAHEAGALVIYDEVITAF-RFMYGGAQDLLGV-EPDLTAL--GKIIGGGLPIGAYGGRKD--IMEQVAPLGPAYQAG 299 (428)
T ss_pred HHHHHHHcCCEEEEEcccccc-ccCcchhhHHhCC-CCCeeee--chhhcCCCceeEEeEHHH--HHhhhccCCCccccc
Confidence 999999999999999999876 3321111112244 5787665 588876677888876542 22333211 111110
Q ss_pred ccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHc----CCCCc-----cceEEEe
Q 048643 350 KATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVAS----DKRVS-----PSAVMDK 420 (506)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~----~~~~~-----p~~v~f~ 420 (506)
|. .+.+.......++|+.+..+ ++.++..++.++|.+.|++ .|... ..++.+.
T Consensus 300 --------------T~-~gnpl~~Aaala~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~~~v~r~~g~~gi~ 361 (428)
T PRK12389 300 --------------TM-AGNPASMAAGIACLEVLQQE---GVYEKLDRLGAMLEEGILEAAEKHGITITINRLKGALTVY 361 (428)
T ss_pred --------------CC-ccCHHHHHHHHHHHHHHhcc---cHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCcEEEEE
Confidence 10 11111223334555555443 3566777788888888865 33111 1333333
Q ss_pred ecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 048643 421 LKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEA 497 (506)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~ 497 (506)
+........ ......-......+.+.+.++|.. +.+.. ...+.+ ....+++||++++++++++.++
T Consensus 362 ~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~Gv~-~~~~~---~~~~~~---~l~~t~e~id~~~~~l~~~l~~ 427 (428)
T PRK12389 362 FTDEKVTNY----DQAERSDGEAFGKFFKLMLNQGIN-LAPSK---YEAWFL---TTAHTEEDIEETLEAVDRAFAQ 427 (428)
T ss_pred EeCCCCCCh----hhhcccCHHHHHHHHHHHHHCCcE-eecCC---CCCeee---cCCCCHHHHHHHHHHHHHHHHh
Confidence 321100000 000000012346777788888864 44321 112333 3456888999999999988754
No 346
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.23 E-value=2.2e-08 Score=104.26 Aligned_cols=305 Identities=12% Similarity=0.041 Sum_probs=167.6
Q ss_pred HHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCC
Q 048643 134 ENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGI 213 (506)
Q Consensus 134 E~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~ 213 (506)
..++.++++++++-+- ...+++.+||+|+..|+..||.....+ +..+ +..+|..+...|-...-+..+.|.
T Consensus 90 ~~~la~~l~~~~~~~~-------~~v~f~~sGseA~e~AlklAr~~~~~~-~~~~-r~~il~~~~~yHG~t~~~~s~~~~ 160 (427)
T TIGR00508 90 AIELCQKLVKMTPNAL-------DCVFLADSGSVAVEVALKMALQYWQAK-GEKN-RQKFLTIRSGYHGDTFGAMSVCDP 160 (427)
T ss_pred HHHHHHHHHhhCCCCC-------CEEEEeCCcHHHHHHHHHHHHHHHHhh-CCCC-ccEEEEEcCCcCCccHhhhcccCC
Confidence 3456678888764321 267999999999999999999864322 1111 233555565666433323322221
Q ss_pred C----------CCCeEEEecCCCCCc-----ccCHHHHHHHHHHHHhcCCccEEEEEecc-CCCCCc----ccChhHHHH
Q 048643 214 D----------LKNFRAIKTTKSSSY-----GLSPDSLLTQINLDVEAGLVPLFLCATIG-TTAITA----VDPLKPLCD 273 (506)
Q Consensus 214 g----------~~~v~~v~~~~~~~~-----~~d~~~L~~~i~~~~~~g~~p~~Vv~t~g-tt~tG~----idpl~~I~~ 273 (506)
. ...+..+|... ..+ .-|++++++.+.+. +....+|++.-. ....|. .+++++|.+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~~~~~l~~~l~~~---~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~ 236 (427)
T TIGR00508 161 ENSMHSLYKGYLPEQIFAPAPQ-NRFDEEWNEEAITPLAKLMELH---SDEIAAVILEPIVQGAGGMRFYHPTYLKRVQA 236 (427)
T ss_pred cccccccccccCCCCeEcCCCC-ccccchhHHHHHHHHHHHHHhc---CCcEEEEEEechhcCcCCcccCCHHHHHHHHH
Confidence 0 01222333211 001 12567777777542 223344444432 223332 367999999
Q ss_pred HHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCC-cceEEEEeCchhHHhhhcCC--ccccCCc
Q 048643 274 VAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTL-DCCCLWVKDPSALVSSLSTN--PEYLKNK 350 (506)
Q Consensus 274 ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~-~~g~~~~r~~~~l~~~~~~~--~~yl~~~ 350 (506)
+|++||+.+++|.++.|+......+.....++ ..|.+++ -|.++..+ .++.++.++. +.+.+... ..+....
T Consensus 237 lc~~~~~llI~DEv~tG~Gr~G~~~~~~~~~v-~pDi~~~--gK~l~gG~~p~~a~~~~~~--~~~~~~~~~~~~~~~~~ 311 (427)
T TIGR00508 237 LCKQYDILLIADEIATGFGRTGKLFACEHAGV-VPDILCV--GKALTGGYMTLSATVTTDK--VAQTISSGEAGCFMHGP 311 (427)
T ss_pred HHHHcCCEEEEeccccCCCcCCccchhhhcCC-CCCEEEe--chhhhcCcccceEEEEcHH--HHHHHhcCCCCccccCC
Confidence 99999999999999866422211111112234 5787774 78886553 5677766543 22333221 1111100
Q ss_pred cccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCC---Cc----c-ceEEEeec
Q 048643 351 ATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKR---VS----P-SAVMDKLK 422 (506)
Q Consensus 351 ~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~---~~----p-~~v~f~~~ 422 (506)
|. .+.+........+|+.+..+ +..++..++.++|.+.|+++.. +. . .++.+.+.
T Consensus 312 -------------T~-~g~p~~~aaa~a~l~~l~~~---~~~~~~~~~~~~l~~~L~~l~~~~~i~~vrg~G~~~~i~~~ 374 (427)
T TIGR00508 312 -------------TF-MGNPLACAVAEASLAILLEG---EWQKQVSAIENQLKRELSPLRKNPVVKDVRVLGAIGVVEMY 374 (427)
T ss_pred -------------CC-CcCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHhhcCCCEEeEeccccEEEEEEC
Confidence 10 11122233444555554333 3457777788888888876522 21 1 44444443
Q ss_pred CCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 048643 423 PKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLE 496 (506)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~ 496 (506)
.. .....+.+++.++|+ ++.+. + ..+|++. ....|++|||++++++++..+
T Consensus 375 ~~-----------------~~~~~~~~~l~~~Gv-~~~~~---~-~~l~~~p-pl~~t~~~id~~~~~l~~~l~ 425 (427)
T TIGR00508 375 KP-----------------VNVEELQKKFVEQGV-WIRPF---G-KLIYVMP-PYIITTEQLQKLTAALIEALH 425 (427)
T ss_pred Cc-----------------cCHHHHHHHHHHCCe-EEEec---C-CEEEEEC-CCCCCHHHHHHHHHHHHHHHh
Confidence 21 112467778888886 44432 1 3688876 345778899999999998864
No 347
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.22 E-value=7.6e-09 Score=108.47 Aligned_cols=307 Identities=9% Similarity=-0.015 Sum_probs=168.3
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHH
Q 048643 131 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQI 210 (506)
Q Consensus 131 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~ 210 (506)
++.+.++.+.|++++.. .+ ...|+++||+|+..|+..||... | ++.+|-.....|-...-....
T Consensus 138 ~~~~~~lAe~l~~~~p~-~~-------~v~f~~SGsEA~e~AlklAR~~t-------g-r~~Ii~~~g~YHG~~~~~~~~ 201 (474)
T PLN02482 138 CLLENVLAEMVIDAVPS-VE-------MVRFVNSGTEACMGVLRLARAYT-------G-REKIIKFEGCYHGHADSFLVK 201 (474)
T ss_pred CHHHHHHHHHHHHhCCC-CC-------EEEEeCChHHHHHHHHHHHHHhc-------C-CCEEEEECCccCCCcchhhhh
Confidence 45667778888888642 11 67899999999999999999752 1 222333444445322111110
Q ss_pred --hCC-----------CC---CCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC----hhH
Q 048643 211 --VGI-----------DL---KNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP----LKP 270 (506)
Q Consensus 211 --~G~-----------g~---~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp----l~~ 270 (506)
.|. .. ..+..+| .-|+++|++.+++. +..+.+|++.-.....|.+-| +++
T Consensus 202 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~-------~nd~~~l~~~l~~~---~~~iAavI~Epv~g~~G~i~p~~~fl~~ 271 (474)
T PLN02482 202 AGSGVATLGLPDSPGVPKAATSATLTAP-------YNDLEAVKKLFEAN---KGEIAAVILEPVVGNSGFIVPKKEFLEG 271 (474)
T ss_pred cCCCccccCCCCCCCCCCCCCCCeEEec-------CCChHHHHHHHHhC---CCceEEEEECCCCCCCCCcCCCHHHHHH
Confidence 011 00 0122222 12789999988642 234556676666666787766 568
Q ss_pred HHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCcc-ccCC
Q 048643 271 LCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPE-YLKN 349 (506)
Q Consensus 271 I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~-yl~~ 349 (506)
|.++|++||+.+++|.++.|+ ...........|+ ..|.+++ -|.++..+++|.+..++. . .+.+..... |...
T Consensus 272 lr~lc~~~g~lLI~DEV~tGf-R~g~~ga~~~~gv-~PDi~t~--gK~lggG~Pigav~g~~e-i-~~~~~~~~~~~~~~ 345 (474)
T PLN02482 272 LREITKENGALLVFDEVMTGF-RIAYGGAQEYFGI-TPDLTTL--GKVIGGGLPVGAYGGRRE-I-MEMVAPAGPMYQAG 345 (474)
T ss_pred HHHHHHHcCCEEEEeccccCe-ecCcchHhHHhCC-CCCEEEe--cchhhCCCceEEEEEcHH-H-HHhhccCCCccccc
Confidence 999999999999999999765 3322221112244 5787665 699987677888876543 2 233321111 1110
Q ss_pred ccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCC---CCc-----c-ceEEEe
Q 048643 350 KATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDK---RVS-----P-SAVMDK 420 (506)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~---~~~-----p-~~v~f~ 420 (506)
|+. +.+........+|+.+..+ +..++..++.++|++.|+++. ++. . +++.+.
T Consensus 346 --------------T~~-gnpl~~aAala~L~~l~~~---~~~~~~~~~g~~l~~~L~~l~~~~g~~~~~~~v~g~~gi~ 407 (474)
T PLN02482 346 --------------TLS-GNPLAMTAGIHTLKRLQQP---GTYEYLDKITKKLIQGILEAGKKAGHEMCGGYISGMFGFF 407 (474)
T ss_pred --------------Ccc-hhHHHHHHHHHHHHHHhcc---CHHHHHHHHHHHHHHHHHHHHHhcCCCEEEcccceEEEEE
Confidence 111 1111222344555555333 356667777888888776531 111 1 333333
Q ss_pred ecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 048643 421 LKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAF 498 (506)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l 498 (506)
+.........+. . ..-.....++.+.+.++|. ++.+..... + +.+...|++|||+++++++++..++
T Consensus 408 f~~~~~~~~~~~---~-~~d~~~~~~~~~~l~~~Gv-~~~~~~~~~----~--~psl~ht~~dId~~l~al~~~l~~~ 474 (474)
T PLN02482 408 FTEGPVYNFADA---K-KSDTAKFARFHRGMLEEGV-YLAPSQFEA----G--FTSLAHTEEDIDFTIAAAERVLARI 474 (474)
T ss_pred EecCCccChhhh---c-cCCHHHHHHHHHHHHHCCe-EEeccCCCC----C--cCCCCCCHHHHHHHHHHHHHHHHhC
Confidence 321100000000 0 0001234567788888886 444422111 1 1345568899999999999987653
No 348
>PRK06149 hypothetical protein; Provisional
Probab=99.20 E-value=1.3e-08 Score=116.19 Aligned_cols=314 Identities=9% Similarity=-0.014 Sum_probs=175.7
Q ss_pred HHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhC
Q 048643 133 LENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVG 212 (506)
Q Consensus 133 lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G 212 (506)
...++.+.|++++.-+. ...+|+++||+||..|+..||... | ++.+|.+....|-...-+..+.+
T Consensus 625 ~~~elae~L~~~~p~~~-------~~v~f~~SGsEA~e~AlklAr~~t-------g-r~~ii~~~~~yHG~t~ga~~~s~ 689 (972)
T PRK06149 625 AVAEFSERLAALAPDGL-------DTVFLVNSGSEANDLAIRLAWAAS-------G-RRDVVSVLEAYHGWTVATDAVST 689 (972)
T ss_pred HHHHHHHHHHHhCCCCc-------CEEEEeCCchHHHHHHHHHHHHhc-------C-CCeEEEEeCCCCCcChhHhhhcC
Confidence 44455567777762111 157899999999999999998752 1 33455555566632222211111
Q ss_pred ----------CCCCCeEEEecCCCCC--cc-cC-----HHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC----hhH
Q 048643 213 ----------IDLKNFRAIKTTKSSS--YG-LS-----PDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP----LKP 270 (506)
Q Consensus 213 ----------~g~~~v~~v~~~~~~~--~~-~d-----~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp----l~~ 270 (506)
.....+..++....-. +. .+ .+++++.++.....+..+.+|++.-.....|.+-| +++
T Consensus 690 ~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~ 769 (972)
T PRK06149 690 SIADNPQALETRPDWVHPVESPNTYRGRFRGADSAADYVRDVVAQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQ 769 (972)
T ss_pred CccccccccCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHHHHHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHH
Confidence 0011234444321101 11 12 35666666554444555666777655556688877 999
Q ss_pred HHHHHHHhCCEEEeecccccccccCccc-hhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCC
Q 048643 271 LCDVAKQFGIWVHVDAAYAGSACICPEF-QHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKN 349 (506)
Q Consensus 271 I~~ia~~~g~~lhVDaA~gg~~~~~~~~-~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~ 349 (506)
|.++|++||+.+++|+++.|+......+ .....|+ ..|.+++ -|.++..++.|++++++.- .+.+... .++..
T Consensus 770 l~~lc~~~g~llI~DEV~tGfGRtG~~~~a~e~~gv-~PDivt~--gK~lg~G~Pl~av~~~~~i--~~~~~~~-~~~~s 843 (972)
T PRK06149 770 VYAAVRARGGVCIADEVQVGYGRLGHYFWGFEQQGV-VPDIITM--AKGMGNGHPLGAVITRREI--AEALEAE-GYFFS 843 (972)
T ss_pred HHHHHHHcCCEEEEEeehhcCCccCccchhhhhcCC-CCCEEEe--cccccCCeeeEEEEEcHHH--HhhhccC-CcccC
Confidence 9999999999999999996653332211 1111244 5788876 5888866778998887532 2333321 12111
Q ss_pred ccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcC----CCCc----c-ceEEEe
Q 048643 350 KATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASD----KRVS----P-SAVMDK 420 (506)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~----~~~~----p-~~v~f~ 420 (506)
|. .+.+........+|..+-.+ ++.++..++.++|.+.|+++ |-+. - .++.+.
T Consensus 844 --------------T~-~gnP~~~aaala~L~~i~~e---~l~~~~~~~G~~l~~~L~~l~~~~~~i~~vrG~Gl~~gve 905 (972)
T PRK06149 844 --------------ST-GGSPVSCRIGMAVLDVLREE---KLQENARRVGDHLKARLEALADRHPLIGAVHGMGLYLGVE 905 (972)
T ss_pred --------------CC-CCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHhCCCeEEEeecceEEEEE
Confidence 11 12122223334445544444 35566666777787777653 2111 1 333343
Q ss_pred ecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 048643 421 LKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEA 497 (506)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~ 497 (506)
+..... .... .......+.+++.++|++ +.+... ...++|+.. ....++++|+.++++|+++..+
T Consensus 906 l~~~~~-------~~~~--~~~~~~~i~~~l~~~Gvl-~~~~g~-~~~vl~~~P-pl~it~~~id~~~~~l~~~l~~ 970 (972)
T PRK06149 906 LVRDRQ-------TLEP--ATEETAAICDRLLELGVI-MQPTGD-HLNILKIKP-PLCLDRESADFFVDMLDRVLTE 970 (972)
T ss_pred EecCcc-------cCCC--ChHHHHHHHHHHHhCCeE-EeecCC-CCCEEEEEC-CCcCCHHHHHHHHHHHHHHHHh
Confidence 321100 0000 012356788888888874 443311 135788876 3457888999999999998764
No 349
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.19 E-value=6.4e-08 Score=100.66 Aligned_cols=312 Identities=10% Similarity=0.001 Sum_probs=173.0
Q ss_pred HHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHh
Q 048643 132 ELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIV 211 (506)
Q Consensus 132 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~ 211 (506)
..+.++.+.|++++.-+- ...+|+++||+|+-.|+..||.....+ +..+ +..+|......|-...-+..+.
T Consensus 87 ~~~~~lae~L~~~~p~~~-------~~v~f~~sGseAve~AlklAr~~~~~~-g~~~-r~~ii~~~~~yHG~t~~a~s~~ 157 (429)
T PRK06173 87 EPAVELAQKLLEILPPSL-------NKIFFADSGSVAVEVAMKMALQYQQAK-GEVQ-RTKFATIRSGYHGDTWHAMSVC 157 (429)
T ss_pred HHHHHHHHHHHhhCCCCc-------CEEEEeCCchHHHHHHHHHHHHHHHHh-CCCC-CcEEEEECCCcCCcchhhhccC
Confidence 344556677777763211 267899999999999999999753222 2111 2234445555564322222221
Q ss_pred C--------C--CCCCeEEEecCCCC---C-cccCHHHHHHHHHHHHhcCCccEEEEEecc-CCCCCccc----ChhHHH
Q 048643 212 G--------I--DLKNFRAIKTTKSS---S-YGLSPDSLLTQINLDVEAGLVPLFLCATIG-TTAITAVD----PLKPLC 272 (506)
Q Consensus 212 G--------~--g~~~v~~v~~~~~~---~-~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~g-tt~tG~id----pl~~I~ 272 (506)
| . ....+..+|..... . ..-+++.|++.+.. .+..+..|++.-. ....|.+- =+++|.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~l~~~i~~---~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~ 234 (429)
T PRK06173 158 DPVTGMHGLFNHSLPVQYFLPQPSIKFGEEWNDEAIEPLQDLLEQ---KGDEIAALILEPVVQGAGGMYFYSPTYLVKAR 234 (429)
T ss_pred CCchhhhhcccccCCCCeEeCCCCcccchhHHHHHHHHHHHHHHh---CCCcEEEEEEcchhhccCCcccCCHHHHHHHH
Confidence 1 0 11123444432100 0 01246667777753 2234445555532 33445552 289999
Q ss_pred HHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCC-cceEEEEeCchhHHhhhcCCc--cccCC
Q 048643 273 DVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTL-DCCCLWVKDPSALVSSLSTNP--EYLKN 349 (506)
Q Consensus 273 ~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~-~~g~~~~r~~~~l~~~~~~~~--~yl~~ 349 (506)
++|++||+++++|.++.|+.....-+.....++ ..|.++ .-|.++..+ .++.++.++.- .+.+.... .+...
T Consensus 235 ~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv-~PDiv~--~gK~l~gG~~p~~a~~~~~~i--~~~~~~~~~~~~~~~ 309 (429)
T PRK06173 235 ELCDQYGVLLIFDEIATGFGRTGKLFALEHAGV-VPDIMC--IGKALTGGYLTLSATITTEAI--AQTICSGEAKCFMHG 309 (429)
T ss_pred HHHHHcCCeEEecchhcCCCcCCcchHHHhcCC-CCCEEE--eehhhhCCccccceEEecHHH--HHHHhcCCCCccccC
Confidence 999999999999999966422211111112244 478777 468887653 57777776532 22332110 01110
Q ss_pred ccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc-------c-ceEEEee
Q 048643 350 KATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS-------P-SAVMDKL 421 (506)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~-------p-~~v~f~~ 421 (506)
. |. .+.+........+|+.+-.+. ..++..++.++|.+.|++..++. . .++.+.+
T Consensus 310 ~-------------T~-~g~p~~~aaa~a~l~~i~~~~---~~~~~~~~g~~l~~~L~~~~~~~~v~~vRg~Gl~~~iel 372 (429)
T PRK06173 310 P-------------TF-MANPLACAIAAESIRLLLESP---WQQNIQRIEAQLKQELAPAAEFDSVAEVRVLGAIGVVEM 372 (429)
T ss_pred C-------------CC-CcCHHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHhhcCCCeeeeeccceEEEEEe
Confidence 0 11 111223344455566554433 46677778888888887542221 1 3344444
Q ss_pred cCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHc
Q 048643 422 KPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAFLT 500 (506)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l~~ 500 (506)
... .....+.+.+.++|. ++.+. | .++|+.. ....+++||+++++.|+++..++-+
T Consensus 373 ~~~-----------------~~~~~i~~~l~e~Gi-~v~~~---g-~~l~~~P-pl~it~~ei~~~~~~l~~~l~~~~~ 428 (429)
T PRK06173 373 KEP-----------------VNMATLQPRFVEHGI-WVRPF---G-KLVYIMP-PFIISPDELSQLTSGLLRVLKQEYN 428 (429)
T ss_pred CCc-----------------ccHHHHHHHHHHCCe-EEEec---C-CEEEEeC-CccCCHHHHHHHHHHHHHHHHHHhc
Confidence 322 113567778888886 44332 2 4799987 5678899999999999999877643
No 350
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=99.19 E-value=5.7e-08 Score=94.67 Aligned_cols=165 Identities=12% Similarity=0.064 Sum_probs=128.9
Q ss_pred HHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhccc
Q 048643 108 FLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRE 187 (506)
Q Consensus 108 ~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~ 187 (506)
-.+..+.....-..+.|..|.+...+.+.|.+.+.+.=|.|.+. ...++|+|+|.|+..-|......
T Consensus 93 ~RA~~~L~~~gGs~GaYS~SqGv~~vR~~VA~~I~rRDG~p~~p-----~dI~LT~GAS~ai~~il~l~~~~-------- 159 (475)
T KOG0258|consen 93 KRAKRILNDCGGSLGAYSDSQGVPGVRKHVAEFIERRDGIPADP-----EDIFLTTGASPAIRSILSLLIAG-------- 159 (475)
T ss_pred HHHHHHHHhcCCcccccccccCChhHHHHHHHHHHhccCCCCCH-----HHeeecCCCcHHHHHHHHHHhcC--------
Confidence 34444544444466789999999999999999999998976553 58999999999987766654432
Q ss_pred CCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc--
Q 048643 188 NISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV-- 265 (506)
Q Consensus 188 ~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i-- 265 (506)
++.-|+++-.-++-....+..+|. ..+..-.|++.+|.+|.+.|++.+++.+ ++..|.++|+..+.|+||.+
T Consensus 160 --~~~GvliPiPQYPLYsAti~l~~~---~~v~YyLdEe~~W~ld~~el~~~~~eA~-k~i~~r~lvvINPGNPTGqvls 233 (475)
T KOG0258|consen 160 --KKTGVLIPIPQYPLYSATISLLGG---TQVPYYLDEESNWSLDVAELERSVDEAR-KGINPRALVVINPGNPTGQVLS 233 (475)
T ss_pred --CCCceEeecCCCchhHHHHHHhCC---cccceeeccccCCCCCHHHHHHHHHHHh-ccCCceEEEEECCCCccchhhc
Confidence 334455554455444555667777 6666667777789999999999999988 88899988999999999998
Q ss_pred -cChhHHHHHHHHhCCEEEeecccccc
Q 048643 266 -DPLKPLCDVAKQFGIWVHVDAAYAGS 291 (506)
Q Consensus 266 -dpl~~I~~ia~~~g~~lhVDaA~gg~ 291 (506)
..+++|..+|.++|+.+..|..|--.
T Consensus 234 ~e~ie~i~~fa~~~~l~llaDEVYQ~N 260 (475)
T KOG0258|consen 234 EENIEGIICFAAEEGLVLLADEVYQDN 260 (475)
T ss_pred HHHHHHHHHHHHHcCeEEechHHHHhh
Confidence 67999999999999999999988543
No 351
>PRK06917 hypothetical protein; Provisional
Probab=99.19 E-value=9.7e-08 Score=99.91 Aligned_cols=330 Identities=12% Similarity=0.048 Sum_probs=175.3
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHH
Q 048643 131 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQI 210 (506)
Q Consensus 131 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~ 210 (506)
++.+.++.+.|++++.-..+ ..+|+++||+|+..|+..||.....+ +..+ +..++......|-...-+...
T Consensus 73 ~~~~~~lae~L~~~~p~~~~-------~v~f~~sGsEAve~AlklAr~~~~~r-g~t~-r~~ii~~~~~yHG~t~~als~ 143 (447)
T PRK06917 73 SEPAEKLAKKLSDLSPGDLN-------WSFFVNSGSEANETAMKIAIQHFQER-GIQG-KHKILSRWMSYHGITMGALSM 143 (447)
T ss_pred CHHHHHHHHHHHHhCCCCCC-------EEEEeCChHHHHHHHHHHHHHHHHhc-CCCC-CCEEEEECCCcCCccHHHHHh
Confidence 45566677888887643222 57899999999999999998764222 2111 223444444555433333333
Q ss_pred hCCCC---------CCeEEEecCCCCCc----------ccCHHHHHHHHHHHHhcCCccEEEEEeccCCCC-CcccC---
Q 048643 211 VGIDL---------KNFRAIKTTKSSSY----------GLSPDSLLTQINLDVEAGLVPLFLCATIGTTAI-TAVDP--- 267 (506)
Q Consensus 211 ~G~g~---------~~v~~v~~~~~~~~----------~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~t-G~idp--- 267 (506)
.|... ..+..+|....... .-+++.|++.+++.. +..+.+|++.-..... |.+-|
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~i~~~~--~~~iAAvi~EPi~g~~gG~~~p~~~ 221 (447)
T PRK06917 144 SGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQLACATELETAIERIG--AEHIAAFIAEPIIGAAGAAVVPPKG 221 (447)
T ss_pred cCCccccccCCCCCCCCeEeCCCcccccccCCChHHHHHHHHHHHHHHHHhcC--CCceEEEEEeccccCcCceecCCHH
Confidence 33210 12233332110000 012456666665321 1234455555333222 34422
Q ss_pred -hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCC-cceEEEEeCchhHHhhhcCCcc
Q 048643 268 -LKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTL-DCCCLWVKDPSALVSSLSTNPE 345 (506)
Q Consensus 268 -l~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~-~~g~~~~r~~~~l~~~~~~~~~ 345 (506)
+++|.++|++||+.+++|+++.|+.....-+.....++ ..|.+++ -|.++..+ +.|++++++. +.+.+.....
T Consensus 222 fl~~lr~lc~~~g~llI~DEv~tGfGRtG~~~a~~~~gv-~PDi~~~--gK~l~~G~~Pi~a~~~~~~--i~~~~~~~~~ 296 (447)
T PRK06917 222 YYKVIKEICDHYDILFIADEVMTGLGRTGAMFAMEHWGV-EPDIMTL--GKGLGAGYTPIAATVVSDR--VMEPILRGSR 296 (447)
T ss_pred HHHHHHHHHHHcCCEEEEechhhCcCcccchhhHHhcCC-CCCEEEe--eehhccCCcceEEEEEcHH--HHHHHhccCc
Confidence 89999999999999999999877533332222112244 4787776 58887665 6788877653 2233322111
Q ss_pred ccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcC----CCCc----c-ce
Q 048643 346 YLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASD----KRVS----P-SA 416 (506)
Q Consensus 346 yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~----~~~~----p-~~ 416 (506)
.+... .|. .+.+........+|+.+..+ +++++..++.++|.+.|+++ |.+. . .+
T Consensus 297 ~~~~~------------~T~-~gnpl~~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~ 360 (447)
T PRK06917 297 SIMSG------------HTL-SANPLSAATALAVLEYMEKH---NLPEKAAEKGEYLIKGLQKVQQQSTIIGDVRGKGLL 360 (447)
T ss_pred ccccc------------cCC-CCCHHHHHHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeecceE
Confidence 11110 000 11112223344555555433 34566666777777777653 2111 1 33
Q ss_pred EEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeee----ECCEEEEEEEecCCCCCHHHHHHHHHHHH
Q 048643 417 VMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAV----CGGIYAMRFAVGATLTEERHVMVAWTMVQ 492 (506)
Q Consensus 417 v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~----~~g~~~lR~~~~~~~tt~edi~~li~~l~ 492 (506)
+.+.+...... ........+....+.+.+.++|.+. .+.. -.+...+|++. ....|++||+.++++|+
T Consensus 361 ~~ie~~~~~~~------~~~~~~~~~~~~~~~~~~~~~Gvl~-~~~~~~~~g~~~~~i~l~P-pl~it~~eid~~~~~l~ 432 (447)
T PRK06917 361 IGVEFVADKKT------KQPFSKSQAVASELISVAAKNGLLL-YPAVAGQDGKEGDAVIIAP-PMTITYSELDELLSIFA 432 (447)
T ss_pred EEEEEeccCCc------CCCCcchhHHHHHHHHHHHhCCcEE-EecccccCCCCCCEEEEEC-CCcCCHHHHHHHHHHHH
Confidence 44444221000 0000000134567888888899754 3321 11235789876 35578889999999999
Q ss_pred HHHHHHHc
Q 048643 493 EQLEAFLT 500 (506)
Q Consensus 493 ~~~~~l~~ 500 (506)
++.+++..
T Consensus 433 ~~l~~~~~ 440 (447)
T PRK06917 433 KSVEEMMQ 440 (447)
T ss_pred HHHHHHHH
Confidence 99888743
No 352
>PRK07483 hypothetical protein; Provisional
Probab=99.19 E-value=8.9e-08 Score=100.05 Aligned_cols=326 Identities=14% Similarity=0.081 Sum_probs=173.4
Q ss_pred HHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHh
Q 048643 132 ELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIV 211 (506)
Q Consensus 132 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~ 211 (506)
....++.+.|++++.-.. ...+|+++||+||..|+..||.....+ |..+ +..+|......|-...-+..+.
T Consensus 73 ~~~~~lae~L~~~~p~~~-------~~v~f~~sGsEAve~AlklAr~~~~~~-g~~~-r~~Ii~~~~~YHG~t~~a~s~s 143 (443)
T PRK07483 73 EPAEALADRLVAAAPAGL-------EHVYFVSGGSEAVEAALKLARQYFVEI-GQPQ-RRHFIARRQSYHGNTLGALAIG 143 (443)
T ss_pred HHHHHHHHHHHHhCCCCC-------CEEEEcCCcHHHHHHHHHHHHHHHHhc-CCCC-CcEEEEECCCcCCcCHHHhhhc
Confidence 344556677887763211 157899999999999999999764221 2111 2223444555564333333222
Q ss_pred CC---------CCCCeEEEecCCCCCccc-------------CHHHHHHHHHHHHhcCCccEEEEEeccCC-CCCcccC-
Q 048643 212 GI---------DLKNFRAIKTTKSSSYGL-------------SPDSLLTQINLDVEAGLVPLFLCATIGTT-AITAVDP- 267 (506)
Q Consensus 212 G~---------g~~~v~~v~~~~~~~~~~-------------d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt-~tG~idp- 267 (506)
|- +...+..+|... .++- .++.|++++... ....+..|++.-... ..|.+-|
T Consensus 144 ~~~~~~~~~~p~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~iAAvivEPiqg~~gG~~~~~ 219 (443)
T PRK07483 144 GNAWRREPFAPLLIEAHHVSPCY--AYREQRAGESDEAYGQRLADELEAKILEL--GPDTVAAFVAETVVGATAGAVPPV 219 (443)
T ss_pred CCcccccccCCCCCCCEEeCCCc--cccccccCCCHHHHHHHHHHHHHHHHHhc--CCCceEEEEEeCcccCcCCeEeCC
Confidence 21 111234444321 0111 124556555421 112334445443222 2355544
Q ss_pred ---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCC-cceEEEEeCchhHHhhhcCC
Q 048643 268 ---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTL-DCCCLWVKDPSALVSSLSTN 343 (506)
Q Consensus 268 ---l~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~-~~g~~~~r~~~~l~~~~~~~ 343 (506)
+++|.++|++||+.+++|+.+.|+.....-+.....++ ..|.+++ -|.++..+ +.|+++++++- .+.+...
T Consensus 220 ~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~~--gK~l~gG~~Pi~av~~~~~i--~~~~~~~ 294 (443)
T PRK07483 220 PGYFKRIREVCDRYGVLLILDEVMCGMGRTGTLFACEEDGV-APDLVTI--AKGLGAGYQPIGAVLASDRI--YDAIADG 294 (443)
T ss_pred HHHHHHHHHHHHHhCCEEEEecceeCcccCcHHHHHhhcCC-CCCeeee--hhhhccCccccEEEEEcHHH--HHHHhcC
Confidence 89999999999999999999877644322222112244 5788887 58887665 78888887642 2333221
Q ss_pred ccccCCccccCCCccCCCCccccCCCCCCchHH---HHHHHHhchhHHHHHHHHHHHHHHHHHHHHHc----CCCCc---
Q 048643 344 PEYLKNKATESKQVVDYKDWQITLSRRFRSLKL---WLVIRNYGVANLRHFLRSHVNMAKLFERLVAS----DKRVS--- 413 (506)
Q Consensus 344 ~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~---~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~----~~~~~--- 413 (506)
+.++.+. .+-...++.. .++|..+-.+ +++++..++.++|.+.|++ .|.+.
T Consensus 295 ~~~~~h~----------------~T~~gnpl~~aaa~a~l~~i~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vR 355 (443)
T PRK07483 295 SGFFQHG----------------HTYLGHATACAAALAVQRVIAED---GLLANVRARGEQLRARLRERLGQHPHVGDIR 355 (443)
T ss_pred CCccccC----------------CCCCCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHhcCCCeeeEe
Confidence 1111110 1111233333 3444444333 3556666777777777754 33221
Q ss_pred -c-ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeee-eECC--EEEEEEEecCCCCCHHHHHHHH
Q 048643 414 -P-SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHA-VCGG--IYAMRFAVGATLTEERHVMVAW 488 (506)
Q Consensus 414 -p-~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~-~~~g--~~~lR~~~~~~~tt~edi~~li 488 (506)
- .++.+.+....... ...+. .......+.+.+.++|.+..... ..++ ...+|+.. ....+++|||+++
T Consensus 356 G~Glm~gie~~~~~~~~----~~~~~--~~~~~~~~~~~~~~~Gll~~~~~~~~~~~~~~~l~~~P-pL~it~~eid~~~ 428 (443)
T PRK07483 356 GRGLFVGVELVADRATK----APFDP--ALKLHARIKREAMARGLMVYPMGGTIDGVRGDHVLLAP-PFIITAAQIDEIV 428 (443)
T ss_pred ecccEEEEEEeeccccc----CCCCc--hhhHHHHHHHHHHHCCcEEEecCccccCCCCCEEEEEC-CCCCCHHHHHHHH
Confidence 1 33444332210000 00000 01234667888888997543211 1111 25799987 4677899999999
Q ss_pred HHHHHHHHHHHcc
Q 048643 489 TMVQEQLEAFLTT 501 (506)
Q Consensus 489 ~~l~~~~~~l~~~ 501 (506)
++|++...++.+.
T Consensus 429 ~~l~~~l~~~~~~ 441 (443)
T PRK07483 429 ERLGDAIDAALAA 441 (443)
T ss_pred HHHHHHHHHHHhh
Confidence 9999998887653
No 353
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.18 E-value=9.2e-08 Score=100.47 Aligned_cols=324 Identities=10% Similarity=0.007 Sum_probs=178.8
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHH
Q 048643 131 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQI 210 (506)
Q Consensus 131 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~ 210 (506)
++...++.+.|++++.-+. ...+|+++||+||..|+..||.....+ +..+ +..+|......|-...-+..+
T Consensus 89 ~~~~~~lae~L~~~~p~~~-------~~v~f~~sGsEAve~AlKlAr~~~~~~-g~t~-r~~ii~~~~~yHG~t~ga~s~ 159 (466)
T PRK07030 89 HEPVIELSERLVKITPPGL-------SRCFYADNGSSAIEVALKMSFHYWRNR-GKPR-KKRFVTLTNSYHGETLAAMSV 159 (466)
T ss_pred CHHHHHHHHHHHHhCCCCc-------CEEEEeCCcHHHHHHHHHHHHHHHHHh-CCCC-CcEEEEECCCcCcccHHHHhc
Confidence 4555667788888763211 267899999999999999998763221 2111 223455555566444334333
Q ss_pred hCCCC---------CCeEEEecCCCCC--c--------ccCHHHHHHHHHHHHhcCCccEEEEEec-cCCCCCcccC---
Q 048643 211 VGIDL---------KNFRAIKTTKSSS--Y--------GLSPDSLLTQINLDVEAGLVPLFLCATI-GTTAITAVDP--- 267 (506)
Q Consensus 211 ~G~g~---------~~v~~v~~~~~~~--~--------~~d~~~L~~~i~~~~~~g~~p~~Vv~t~-gtt~tG~idp--- 267 (506)
.|... ..+..+|...... . .-+++.|++.+.+ .+.....|++.- .....|.+-|
T Consensus 160 ~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~~le~~~~~---~~~~iAAvi~EP~iqg~gG~~~~~~~ 236 (466)
T PRK07030 160 GDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSWEEHSRRMFAHMEQTLAE---HHDEIAAVIVEPLIQGAGGMRMYHPV 236 (466)
T ss_pred cCCccccccCCccCCCCEEcCCCCccccccCCCHHHHHHHHHHHHHHHHHh---CCCceEEEEEecccccCCCcccCCHH
Confidence 33210 1234444321000 0 1134566776653 223455565554 2334465533
Q ss_pred -hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCC-cceEEEEeCchhHHhhhcCCcc
Q 048643 268 -LKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTL-DCCCLWVKDPSALVSSLSTNPE 345 (506)
Q Consensus 268 -l~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~-~~g~~~~r~~~~l~~~~~~~~~ 345 (506)
+++|.++|++||+.+++|+.+.|+.....-+.....|+ ..|.+++ -|.++..+ +.|.+++++.- .+.+....+
T Consensus 237 yl~~lr~lc~~~g~llI~DEV~TGfGRtG~~~a~~~~gv-~PDiv~~--gKgl~gG~~Pi~av~~~~ei--~~~~~~~~~ 311 (466)
T PRK07030 237 YLKLLREACDRYGVHLIHDEIAVGFGRTGTMFACEQAGI-RPDFLCL--SKALTGGYLPLAAVLTTDTV--YQAFYDDYP 311 (466)
T ss_pred HHHHHHHHHHHcCCEEEEeehhhCcCccccchHHHhcCC-CCCEEee--ehhccCCcccceEEEecHHH--HHHHhcccc
Confidence 89999999999999999999877644332222222345 5888887 58887664 67888876542 233321100
Q ss_pred ---ccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCC---Cc----c-
Q 048643 346 ---YLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKR---VS----P- 414 (506)
Q Consensus 346 ---yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~---~~----p- 414 (506)
.+.+. .|. .+.+......-++|+.+-++ +++++..++.++|.+.|+++.. +. .
T Consensus 312 ~~~~~~h~------------~T~-~gnpla~aaa~a~L~~i~~~---~l~~~~~~~G~~l~~~L~~l~~~~~v~~vrG~G 375 (466)
T PRK07030 312 TLRAFLHS------------HSY-TGNPLACAAALATLDIFEQD---NVIENNRALARRMAEATAHLADHPHVAEVRQTG 375 (466)
T ss_pred cccccccC------------CCC-CCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHhcCCCEEEeEece
Confidence 00000 010 11112223334445555443 3566777788888888876422 22 1
Q ss_pred ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHH
Q 048643 415 SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQ 494 (506)
Q Consensus 415 ~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~ 494 (506)
.++.+.+....... .+... ......++.+++.++|.+ +.+. + ..+|+.. ....|++||+.+++.+++.
T Consensus 376 l~~gie~~~~~~~~----~~~~~--~~~~~~~i~~~~~~~Gvl-~~~~---g-~~i~~~P-pl~it~~eid~~~~~l~~a 443 (466)
T PRK07030 376 MILAIEMVQDKASK----TPYPW--QERRGLKVYQHALERGAL-LRPL---G-SVVYFLP-PYVITPEQIDFLAEVASEG 443 (466)
T ss_pred eEEEEEeccCcccc----ccCcc--hhHHHHHHHHHHHHCCeE-EEec---C-CEEEEEC-CccCCHHHHHHHHHHHHHH
Confidence 33444442210000 00000 012345678888888974 3332 2 4688876 4677899999999999999
Q ss_pred HHHHH
Q 048643 495 LEAFL 499 (506)
Q Consensus 495 ~~~l~ 499 (506)
.+++.
T Consensus 444 l~~~~ 448 (466)
T PRK07030 444 IDIAT 448 (466)
T ss_pred HHHHh
Confidence 98873
No 354
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.18 E-value=8.3e-09 Score=97.11 Aligned_cols=327 Identities=14% Similarity=0.143 Sum_probs=176.6
Q ss_pred HHHHHhh-cCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccC
Q 048643 110 GEMLSSG-FNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGREN 188 (506)
Q Consensus 110 ~~~l~~~-~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~ 188 (506)
++++++. +......|+...+-..+-+.+..++.+.+|+.-+. .+..+|+|+-.+.++.....-.+ ..+|
T Consensus 55 aemla~~~~~e~~cnY~~pQG~~~li~ala~~l~~~ygwnit~-----~NIalTnGSQs~fFYlfNlF~G~-----~sdG 124 (417)
T COG3977 55 AEMLASGKATEALCNYDGPQGKAVLIDALAKMLRREYGWNITA-----QNIALTNGSQSAFFYLFNLFAGR-----RSDG 124 (417)
T ss_pred HHHHhcchHHHHHhcCCCCcchhHHHHHHHHHHHHHhCCCCcc-----ceeeecCCccchHHHHHHHhcCc-----cCCC
Confidence 4444443 22233456555566778888899999999998653 37888888766666654432211 1223
Q ss_pred CCCeEEEeCCCCchHHHHHHHHhCCC--CCCeEEEe----cCCCC--CcccCHHHHHHHHHHHHhcCCccEEEEEeccCC
Q 048643 189 ISKLVVYGSDQTHCALQKAAQIVGID--LKNFRAIK----TTKSS--SYGLSPDSLLTQINLDVEAGLVPLFLCATIGTT 260 (506)
Q Consensus 189 ~~~~~v~~s~~~H~s~~ka~~~~G~g--~~~v~~v~----~~~~~--~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt 260 (506)
..+. |+.+-...| ..+.++| .+.++.+. ..+.+ .++.|.++|. +.+.+ -+||++-+||
T Consensus 125 ~~k~-illPLaPeY-----iGY~d~~l~~d~fVs~kP~iel~~~g~FKY~vDF~~l~--i~e~~------g~ic~SRPtN 190 (417)
T COG3977 125 TEKK-ILLPLAPEY-----IGYADAGLEEDLFVSAKPNIELLPAGQFKYHVDFEHLH--IGEST------GAICVSRPTN 190 (417)
T ss_pred ccee-EeeccChhh-----ccccccccCccceeeccCCcccccccceeeccCHHHcc--ccccc------ceEEecCCCC
Confidence 2232 333311111 1111222 22222221 12222 3678888875 33333 3899999999
Q ss_pred CCCcc---cChhHHHHHHHHhCCEEEeecccccccc--cCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchh
Q 048643 261 AITAV---DPLKPLCDVAKQFGIWVHVDAAYAGSAC--ICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSA 335 (506)
Q Consensus 261 ~tG~i---dpl~~I~~ia~~~g~~lhVDaA~gg~~~--~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~ 335 (506)
+||.| +.+.+|.++|++||+.+++|.|||..+- .+....... ..--..+++..|.+...-.||+++...+ .
T Consensus 191 PTGNVlTdeE~~kldalA~~~giPliIDnAYg~PFP~iifsd~~~~w---~~NiilC~SLSK~GLPG~R~GIiIane~-v 266 (417)
T COG3977 191 PTGNVLTDEELAKLDALARQHGIPLIIDNAYGVPFPGIIFSDATPLW---NENIILCMSLSKLGLPGSRCGIIIANEK-V 266 (417)
T ss_pred CCCCcccHHHHHHHHHHhhhcCCcEEEecccCCCCCceecccccccC---CCCEEEEeehhhcCCCCcceeEEEccHH-H
Confidence 99999 5688999999999999999999987542 111111111 1222467788898887778998765443 3
Q ss_pred HHhhhcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHH----HHHhchhHHHHHHH-HHHHHHHHHHHHHHcCC
Q 048643 336 LVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLV----IRNYGVANLRHFLR-SHVNMAKLFERLVASDK 410 (506)
Q Consensus 336 l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~----l~~~G~~g~~~~i~-~~~~~a~~l~~~l~~~~ 410 (506)
.++++..-.-+ ++..+|-..|+..-+. |..+.+.-++-..+ +....-..++..|-+.+
T Consensus 267 -iqaitnmn~ii----------------sLap~~~G~Aia~~mie~gdl~rlseqVIrPFY~~~~q~~~~~l~~~lp~~~ 329 (417)
T COG3977 267 -IQAITNMNGII----------------SLAPGRMGPAIAAEMIESGDLLRLSEQVIRPFYRNRVQTTIAILRRYLPEYR 329 (417)
T ss_pred -HHHHHhcccee----------------eecCCCccHHHHHHHhhcchHHHHHHHhhhHHHHHHHHHHHHHHHHhcCccc
Confidence 34443321111 1222222222211111 11111111111111 11112223333333332
Q ss_pred CCc--c--ceEEE-eecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeE---------CCEEEEEEEecC
Q 048643 411 RVS--P--SAVMD-KLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVC---------GGIYAMRFAVGA 476 (506)
Q Consensus 411 ~~~--p--~~v~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~---------~g~~~lR~~~~~ 476 (506)
-+- | .++.+ ++..- --....|+++|.++|.+++.+..+ +...++|++.+.
T Consensus 330 ~~iHkpEGAIFlWLWf~dL----------------PItt~~LYq~LKa~Gvl~VPG~~FFpGl~~ewpH~hqC~Rmn~~~ 393 (417)
T COG3977 330 CLIHKPEGAIFLWLWFKDL----------------PITTEELYQRLKARGVLMVPGHYFFPGLDKEWPHTHQCMRMNYVP 393 (417)
T ss_pred eeeecCCcceeehhhhccC----------------CCCHHHHHHHHHhCeEEEecccccCCCCCCCCCCccceEEEecCC
Confidence 221 5 44443 23221 112578899999999977765432 235799998753
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHc
Q 048643 477 TLTEERHVMVAWTMVQEQLEAFLT 500 (506)
Q Consensus 477 ~~tt~edi~~li~~l~~~~~~l~~ 500 (506)
+++.|++-+..|.+.++++-.
T Consensus 394 ---~~~~ie~Gva~lae~ve~~yq 414 (417)
T COG3977 394 ---EPEKIEKGVAILAEEVERAYQ 414 (417)
T ss_pred ---CHHHHHHHHHHHHHHHHHHHh
Confidence 777899999998888877654
No 355
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.18 E-value=3.6e-08 Score=100.17 Aligned_cols=276 Identities=13% Similarity=0.053 Sum_probs=157.6
Q ss_pred HHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhC--
Q 048643 135 NIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVG-- 212 (506)
Q Consensus 135 ~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G-- 212 (506)
.++.+.++++.+++ ..+++++||+|+..|+.+||... + ++.+|..+...|-+..-+....+
T Consensus 69 ~~la~~l~~~~~~~---------~v~~~~SGseA~e~Alklar~~~-------g-r~~Ii~~~~syHG~t~~~ls~~~~~ 131 (364)
T PRK04013 69 EEMLEELSKWVNYE---------YVYMGNSGTEAVEAALKFARLYT-------G-RKEIIAMTNAFHGRTMGALSATWKP 131 (364)
T ss_pred HHHHHHHHhhcCCC---------EEEEeCchHHHHHHHHHHHHHHh-------C-CCEEEEECCccccCchhhccCCCCc
Confidence 33445566666553 56899999999999999998752 0 23345555555644333332221
Q ss_pred -----CC--CCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc-cC---hhHHHHHHHHhCCE
Q 048643 213 -----ID--LKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV-DP---LKPLCDVAKQFGIW 281 (506)
Q Consensus 213 -----~g--~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i-dp---l~~I~~ia~~~g~~ 281 (506)
.+ ...+..+|. -|++.+++.+.+. +..|++.......|.+ -| +++|.++|++||+.
T Consensus 132 ~~~~~~~p~~~~~~~~~~-------~d~~~l~~~i~~~------~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~gil 198 (364)
T PRK04013 132 KYREDFEPLVPGFKHIPF-------NDVEAAKEAITKE------TAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGAL 198 (364)
T ss_pred ccccCCCCCCCCcEEecC-------CCHHHHHHHhcCC------cEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCE
Confidence 11 012233332 2678888887532 3355555444344544 33 99999999999999
Q ss_pred EEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCC
Q 048643 282 VHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYK 361 (506)
Q Consensus 282 lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~ 361 (506)
++.|+++.|+ ....-+.....++ ..|.+++ -|.++..++.|.++.+..- .. ..+..
T Consensus 199 lI~DEv~tG~-RtG~~~a~~~~gv-~PDiv~~--gK~lggG~P~~a~~~~~~~--~~-----~~~~~------------- 254 (364)
T PRK04013 199 LIADEVQSGL-RTGKFLAIEHYKV-EPDIVTM--GKGIGNGVPVSLTLTNFDV--ER-----GKHGS------------- 254 (364)
T ss_pred EEEechhhcC-CCCchhHHHhcCC-CCCEEEe--cccccCCceeEEEEecccc--cC-----CCcCC-------------
Confidence 9999998875 3322222222234 5787777 5888766778888776431 00 00000
Q ss_pred CccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc----c-ceEEEeecCCCcccccccccch
Q 048643 362 DWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS----P-SAVMDKLKPKYENCHSQQLVTE 436 (506)
Q Consensus 362 ~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~----p-~~v~f~~~~~~~~~~~~~~~~~ 436 (506)
|. .+.+........+|..+-++++.+.+++. + ..+.. +.+. . -++.+.+..+
T Consensus 255 --T~-~gnp~~~aaa~a~l~~i~~~~l~~~~~~~------l-~~l~~-~~v~~vRG~Gl~~gve~~~~------------ 311 (364)
T PRK04013 255 --TF-GGNPLACKAVAVTLRILRRERLVEKAGEK------F-IEIKG-ERVVTTRGRGLMIGIVLKKP------------ 311 (364)
T ss_pred --CC-CcCHHHHHHHHHHHHHHHhccHHHHHHHH------H-HHhcc-CcceeeeeCcEEEEEEeCCc------------
Confidence 10 12122223444555656555554444332 2 22222 3222 1 3333333221
Q ss_pred HHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 048643 437 EEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAFL 499 (506)
Q Consensus 437 ~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l~ 499 (506)
...+.+.+.++|.+ +.+ .+..++|+.. ....++++|+++++.|++..+++.
T Consensus 312 -------~~~i~~~~~~~Gll-~~~---~g~~vlr~~P-pl~it~~~i~~~~~~l~~~l~~~~ 362 (364)
T PRK04013 312 -------VGKYVEELQNRGYL-VHT---AGQRVIRLLP-PLIISKDTMEEAKSAIEGVINDIL 362 (364)
T ss_pred -------HHHHHHHHHhCCcE-Eee---CCCCEEEEeC-CcccCHHHHHHHHHHHHHHHHHHh
Confidence 23566777788864 332 2446899987 467789999999999999987654
No 356
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.17 E-value=3.8e-08 Score=102.20 Aligned_cols=308 Identities=10% Similarity=-0.014 Sum_probs=168.7
Q ss_pred HHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHh
Q 048643 132 ELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIV 211 (506)
Q Consensus 132 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~ 211 (506)
+...++.+.|++++.-+.+ ..+++++||+|+..|+..||.....+ + .+ +..+|......|-...-+..+.
T Consensus 86 ~~~~~la~~L~~~~p~~~~-------~v~f~~SGsEAve~AlklAr~~~~~~-g-~~-r~kii~~~~~yHG~t~~a~s~~ 155 (428)
T PRK07986 86 PPAIELCRKLVAMTPQPLE-------CVFLADSGSVAVEVAMKMALQYWQAK-G-EP-RQRFLTLRHGYHGDTFGAMSVC 155 (428)
T ss_pred HHHHHHHHHHHhhCCCCcC-------EEEEeCCcHHHHHHHHHHHHHHHHhc-C-CC-CcEEEEECCCcCCCcHhhhccc
Confidence 4455667788887642212 57899999999999999999753211 1 11 2234445555564332222222
Q ss_pred CC--------C--CCCeEEEecCCCC---Cc-ccCHHHHHHHHHHHHhcCCccEEEEEecc-CCCCCcc----cChhHHH
Q 048643 212 GI--------D--LKNFRAIKTTKSS---SY-GLSPDSLLTQINLDVEAGLVPLFLCATIG-TTAITAV----DPLKPLC 272 (506)
Q Consensus 212 G~--------g--~~~v~~v~~~~~~---~~-~~d~~~L~~~i~~~~~~g~~p~~Vv~t~g-tt~tG~i----dpl~~I~ 272 (506)
|- + ...+..+|..... .+ .-|+++|++.++.. +....+|++.-. ....|.+ +.|++|.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~~~---~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~ 232 (428)
T PRK07986 156 DPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDIAPFARLMAAH---RHEIAAVILEPIVQGAGGMRIYHPEWLKRVR 232 (428)
T ss_pred CCchhhhhccCCCCCCCEEECCCCcccchhhHHHHHHHHHHHHHhC---CCcEEEEEEechhcCcCCcccCCHHHHHHHH
Confidence 21 0 0123344432100 01 23667888887632 223334555432 3333443 3499999
Q ss_pred HHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCC-CcceEEEEeCchhHHhhhcCCc-cccCCc
Q 048643 273 DVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSALVSSLSTNP-EYLKNK 350 (506)
Q Consensus 273 ~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~-~yl~~~ 350 (506)
++|++||+++++|.++.|+.....-+.....|+ ..|.+++ -|.++.. +++|++++++. +.+.+.... ..+...
T Consensus 233 ~lc~~~g~lLI~DEv~tG~GrtG~~fa~~~~gv-~PDi~t~--gK~l~gG~~p~~av~~~~~--i~~~~~~~~~~~~~~~ 307 (428)
T PRK07986 233 KLCDREGILLIADEIATGFGRTGKLFACEHAGI-APDILCL--GKALTGGTMTLSATLTTRE--VAETISNGEAGCFMHG 307 (428)
T ss_pred HHHHHcCCEEEEeccccCCccCCCeeeecccCC-CCCEEEe--chhhhCCcccCcchhchHH--HHHHhhcCCCCccccC
Confidence 999999999999999866422211111112234 4687764 6888655 36677776643 223332111 000000
Q ss_pred cccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcC---CCCc----c-ceEEEeec
Q 048643 351 ATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASD---KRVS----P-SAVMDKLK 422 (506)
Q Consensus 351 ~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~---~~~~----p-~~v~f~~~ 422 (506)
.|.. +.+........+|+.+-.+ ++.++..++.++|.+.|+++ +.+. . .++.+.+.
T Consensus 308 ------------~T~~-g~p~~~aaa~a~L~~i~~~---~~~~~~~~~g~~l~~~l~~l~~~~~i~~vRg~Gl~~~ve~~ 371 (428)
T PRK07986 308 ------------PTFM-GNPLACAVANASLSLLESG---DWQQQVAAIEAQLREELAPLRDAPMVADVRVLGAIGVVETT 371 (428)
T ss_pred ------------CCCC-cCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHhcCCCEEeEeccceEEEEEeC
Confidence 0111 2122334445556655444 34667777788888888764 2222 1 33333332
Q ss_pred CCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 048643 423 PKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLE 496 (506)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~ 496 (506)
.+ .....+.+.+.++|.. +.+. | .++|++. ....|+++|+++++.|.+..+
T Consensus 372 ~~-----------------~~~~~~~~~l~~~Gl~-~~~~---g-~~i~~~P-pl~it~~ei~~~~~~l~~~l~ 422 (428)
T PRK07986 372 RP-----------------VNMAALQRFFVEQGVW-IRPF---G-KLIYLMP-PYIILPEQLQRLTAAVNRAVQ 422 (428)
T ss_pred Cc-----------------ccHHHHHHHHHHCCcE-EEec---C-CEEEEeC-CCCCCHHHHHHHHHHHHHHHh
Confidence 21 0134677788888974 4332 3 4799976 467789999999999988763
No 357
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.16 E-value=2.4e-08 Score=103.74 Aligned_cols=317 Identities=12% Similarity=0.030 Sum_probs=167.1
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHH---HHH
Q 048643 131 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCAL---QKA 207 (506)
Q Consensus 131 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~---~ka 207 (506)
++.+.++.+.|.++++.... ...|+++||+|+..|+..||... | +..+|......|-.. .-+
T Consensus 92 ~~~~~~la~~L~~~~~~~~~-------~v~f~~SGsEA~e~AiklAr~~t-------g-r~~ii~~~~~yHG~td~~~~~ 156 (433)
T PRK00615 92 SEQEILFAEELFSYLGLEDH-------KIRFVSSGTEATMTAVRLARGIT-------G-RSIIIKFLGCYHGHADTLLQG 156 (433)
T ss_pred CHHHHHHHHHHHHhCCCCcC-------EEEEeCchHHHHHHHHHHHHHhh-------C-CCEEEEEcCccCCCCcccCcc
Confidence 34556677888888754322 57899999999999999999752 1 223333444445322 111
Q ss_pred HHHhCCCCCCeEE-EecCCCCCc-----ccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC----hhHHHHHHHH
Q 048643 208 AQIVGIDLKNFRA-IKTTKSSSY-----GLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP----LKPLCDVAKQ 277 (506)
Q Consensus 208 ~~~~G~g~~~v~~-v~~~~~~~~-----~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp----l~~I~~ia~~ 277 (506)
....+-....... ......... .-|+++|++.+.+. +..+.+|++.......|.+-| +++|.++|++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~ 233 (433)
T PRK00615 157 ISFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIFQTVMNSL---GHRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRR 233 (433)
T ss_pred cccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhc---CCceEEEEECCCCCCCCcccCCHHHHHHHHHHHHH
Confidence 1111110000000 000000000 12788999988643 233556776666666788766 4599999999
Q ss_pred hCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCc
Q 048643 278 FGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQV 357 (506)
Q Consensus 278 ~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~ 357 (506)
||+.+++|.++.|+ ...........++ ..|.+++ -|.++..+.+|+++.++.- .+.+... .+....
T Consensus 234 ~g~llI~DEv~tG~-R~G~~ga~~~~gv-~PDi~~~--gK~lggG~p~~av~~~~~i--~~~~~~~-~~~~~~------- 299 (433)
T PRK00615 234 TGSLSIMDEVVTGF-RVAQGGAAAIYHV-KPDITVY--GKILGGGLPAAAVVAHKSI--MDHLAPE-GTIFQA------- 299 (433)
T ss_pred cCCEEEEEcccccc-cccHhHHHHhcCC-CCCeEEE--cccccCCcceeeeeecHHH--HhhhcCC-CCcccC-------
Confidence 99999999999655 3222111111234 5777764 6988765668888876542 2333211 111000
Q ss_pred cCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcC---CCCc-----c-ceEEEeecCCCccc
Q 048643 358 VDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASD---KRVS-----P-SAVMDKLKPKYENC 428 (506)
Q Consensus 358 ~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~---~~~~-----p-~~v~f~~~~~~~~~ 428 (506)
.|. .+.+........+|+.+..+. .+++..++.++|.+.|++. .++. . .++.+.+.......
T Consensus 300 -----~T~-~g~p~~~aa~la~L~~i~~~~---~~~~~~~~g~~l~~~l~~~~~~~g~~v~~~r~G~~~~i~~~~~~~~~ 370 (433)
T PRK00615 300 -----GTL-SGNPLAMAAGKASINLCREQG---FYTQLSTLEQNFLSPIEEMIRSQGFPVSLVRYGSMFSFFFNENRPNN 370 (433)
T ss_pred -----CCC-cccHHHHHHHHHHHHHHhccc---HHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeeceEEEEEEeCCCCCC
Confidence 010 111122234445555554333 4566666777776666542 1231 1 33344433221000
Q ss_pred ccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 048643 429 HSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAFL 499 (506)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l~ 499 (506)
.. +. .....+...++...+.++|. ++.+..+.. . .+ +...|++|||+++++++++.+.+.
T Consensus 371 ~~---~~-~~~~~~~~~~~~~~l~~~Gv-~~~~~~~~~-~----~l-s~~ht~~did~~~~a~~~~~~~~~ 430 (433)
T PRK00615 371 LA---EA-QLSDIEAFQTFYQSAFSKGV-YLSPSPFEA-S----FL-SSAHSMENLDYAQNVLIDSLEKVF 430 (433)
T ss_pred hH---HH-hhCCHHHHHHHHHHHHHCCe-eecCccccc-c----ce-ecCCCHHHHHHHHHHHHHHHHHHh
Confidence 00 00 00012345678888889996 444322111 1 22 334478899999999999988763
No 358
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.16 E-value=8.5e-08 Score=100.71 Aligned_cols=328 Identities=11% Similarity=0.031 Sum_probs=176.0
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHH
Q 048643 131 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQI 210 (506)
Q Consensus 131 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~ 210 (506)
++.+.++.+.|++++.-.. ...+|+++||+||..|+..||.....+ |..+ ++.+|......|-...-+..+
T Consensus 98 ~~~~~~lae~L~~~~p~~~-------~~v~f~~SGseAve~AlklAr~~~~~~-g~tg-r~~ii~~~~~YHG~t~~als~ 168 (460)
T PRK06916 98 NVPSILLAEKLIEVVPEGL-------KKVFYSDSGATAVEIAIKMAFQYWQNK-GKPK-KQRFVTLKNAYHGDTIGAVSV 168 (460)
T ss_pred CHHHHHHHHHHHHhCCCCC-------CEEEEeCCcHHHHHHHHHHHHHHHHhc-CCCC-CcEEEEECCcCCcccHHhHhc
Confidence 3455567778888764221 157999999999999999999754221 2111 233455555566544444443
Q ss_pred hCCC---------CCCeEEEecCCCCC--c--------ccCHHHHHHHHHHHHhcCCccEEEEEec-cCCCCCcccC---
Q 048643 211 VGID---------LKNFRAIKTTKSSS--Y--------GLSPDSLLTQINLDVEAGLVPLFLCATI-GTTAITAVDP--- 267 (506)
Q Consensus 211 ~G~g---------~~~v~~v~~~~~~~--~--------~~d~~~L~~~i~~~~~~g~~p~~Vv~t~-gtt~tG~idp--- 267 (506)
.|.. ...+..+|...... + .-+++.|++.++. .+..+.+|++.- .....|.+-|
T Consensus 169 s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~~~iAAvi~EP~iqg~gG~~~~~~~ 245 (460)
T PRK06916 169 GAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLEELEELLKE---KHEEIAAIIVEPLVQGAGGMITMPKG 245 (460)
T ss_pred cCCcccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHh---CCCcEEEEEEeccccCCCCcccCCHH
Confidence 3321 01234454321000 0 1235566666652 223445555543 2344465532
Q ss_pred -hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCC-cceEEEEeCchhHHhhhcCCcc
Q 048643 268 -LKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTL-DCCCLWVKDPSALVSSLSTNPE 345 (506)
Q Consensus 268 -l~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~-~~g~~~~r~~~~l~~~~~~~~~ 345 (506)
+++|.++|++||+.+++|+.+.|+.....-+.....|+ ..|.+++ -|.++..+ +.|+++.++.- .+.+...
T Consensus 246 fl~~lr~lc~~~g~llI~DEV~TG~GRtG~~~a~~~~gv-~PDiv~~--gK~l~gG~~Pi~av~~~~ei--~~~~~~~-- 318 (460)
T PRK06916 246 YLKGLRNLCTKYNVLFITDEVATGFGRTGKMFACEHENV-TPDIMTA--GKGLTGGYLPIAITVTTDEI--YNAFYGD-- 318 (460)
T ss_pred HHHHHHHHHHHcCCEEEeechhhCCCcCchhhHHHhcCC-CCCeeee--ehhhhcCccccceeeecHHH--HHHhhcc--
Confidence 89999999999999999999877533322222212244 5788776 58877664 67888876542 2233211
Q ss_pred ccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCC---c-c----ceE
Q 048643 346 YLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRV---S-P----SAV 417 (506)
Q Consensus 346 yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~---~-p----~~v 417 (506)
+.... .. ....|. .+.+........+|..+..+ +++++..++.++|.+.|+++... . . .++
T Consensus 319 ~~~~~-----~~--~~~~T~-~gnpl~~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Glm~ 387 (460)
T PRK06916 319 YEEQK-----TF--FHGHSY-TGNPLGCAVALANLELYEKT---NLIEQVARKTEYVATQLEDLFALKHVGDIRQLGLMV 387 (460)
T ss_pred ccccC-----cc--ccCCCC-CCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHhhcCCCeEEeecCCcee
Confidence 10000 00 000011 11111222333444444333 35567777888888888765322 1 1 333
Q ss_pred EEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 048643 418 MDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEA 497 (506)
Q Consensus 418 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~ 497 (506)
.+.+..+... +. ... .. .....++...+.++|.+. .+. | ..+|+.. ....+++||+.++++|++..++
T Consensus 388 giel~~~~~~---~~-~~~-~~-~~~~~~i~~~~~~~Gvl~-~~~---g-~~l~~~P-pl~it~~~id~~~~~l~~~l~~ 455 (460)
T PRK06916 388 GIELVKNKET---KE-PFE-WT-ERVGVQVCKRSRELGMLT-RPL---G-NTIVFMP-PLASTIDELDEMLRILYKAISD 455 (460)
T ss_pred eEEeeccccc---cc-CCC-ch-hhHHHHHHHHHHHCCeEE-Eec---C-CEEEEeC-CcccCHHHHHHHHHHHHHHHHh
Confidence 3333221000 00 000 00 123456778888889643 332 2 4788876 4667889999999999999877
Q ss_pred HHc
Q 048643 498 FLT 500 (506)
Q Consensus 498 l~~ 500 (506)
+..
T Consensus 456 ~~~ 458 (460)
T PRK06916 456 VTE 458 (460)
T ss_pred hcc
Confidence 643
No 359
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.16 E-value=1.3e-07 Score=99.47 Aligned_cols=325 Identities=10% Similarity=0.026 Sum_probs=173.5
Q ss_pred HHHHHHHHHHHHHcCCC---CccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHH
Q 048643 132 ELENIVMDWLGQMLKLP---KSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAA 208 (506)
Q Consensus 132 ~lE~~~~~~la~l~g~~---~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~ 208 (506)
+...++.+.|++++.-. ... ...+|+++||+||..|+..||.....+ |..+ +..+|......|-...-+.
T Consensus 107 ~~~~~lae~L~~~~p~~~~~~~~-----~~v~f~~sGSEAvE~AlKlAr~~~~~~-g~~~-r~~ii~~~~syHG~t~gal 179 (472)
T PRK08742 107 EPAVQLAEQLLAIAPRQDGRAPL-----SKVFYADNGSAGVEVALKMAFHYFHNR-GEHR-RTRFIALENGYHGETIGAL 179 (472)
T ss_pred HHHHHHHHHHHHhCCCcccCCCC-----CEEEEeCCchHHHHHHHHHHHHHHHhc-CCCC-CcEEEEECCCcCCCchhhh
Confidence 44556667788876321 011 257899999999999999999864332 2111 2334555555664333333
Q ss_pred HHhCCC---------CCCeEEEecCCCCC--c--------ccCHHHHHHHHHHHHhcCCccEEEEEec-cCCCCCcccC-
Q 048643 209 QIVGID---------LKNFRAIKTTKSSS--Y--------GLSPDSLLTQINLDVEAGLVPLFLCATI-GTTAITAVDP- 267 (506)
Q Consensus 209 ~~~G~g---------~~~v~~v~~~~~~~--~--------~~d~~~L~~~i~~~~~~g~~p~~Vv~t~-gtt~tG~idp- 267 (506)
...|.. ...+..+|...... . .-+++.|++.+.. .+..+..|++.- .....|.+-|
T Consensus 180 s~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~iAAvI~EPviqg~gG~~~~p 256 (472)
T PRK08742 180 AVGDIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSAEDYALQAADALQALFEQ---SPGEICALILEPRLQCAGGMRMHH 256 (472)
T ss_pred hccCCcccccccCCCCCCCEEeCCCCccccccCCCHHHHHHHHHHHHHHHHHh---CCCceEEEEEccccccCCCcccCC
Confidence 332221 01234454421000 0 0135666666652 223445555543 2334465532
Q ss_pred ---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCC-cceEEEEeCchhHHhhhcCC
Q 048643 268 ---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTL-DCCCLWVKDPSALVSSLSTN 343 (506)
Q Consensus 268 ---l~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~-~~g~~~~r~~~~l~~~~~~~ 343 (506)
++++.++|++||+.+++|+.+.|+.....-+.....|+ ..|.+++ -|.++..+ +.|.++++++- .+.+...
T Consensus 257 ~~fl~~lr~lc~~~gillI~DEV~TGfGRtG~~~a~e~~gv-~PDiv~~--gKgl~gG~~Plaav~~~~ei--~~~~~~~ 331 (472)
T PRK08742 257 PAYLRRARELCDAHGAFLIADEIATGFGRTGTLFACEQAGV-MPDLLCL--SKGLTGGFLPLSAVLATQQL--YDAFLDD 331 (472)
T ss_pred HHHHHHHHHHHHHcCCEEEEechhhCCCCCccchHHHhcCC-CCCEEEE--cccccCCCCCcceeeccHHH--HHHhhcc
Confidence 89999999999999999999877644322222222345 5898887 58887654 67777776542 2333211
Q ss_pred c--cccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHc---CCCCc----c
Q 048643 344 P--EYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVAS---DKRVS----P 414 (506)
Q Consensus 344 ~--~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~---~~~~~----p 414 (506)
. ..+.. ..|. .+.+........+|..+-++++ +++..++.++|.+.++. .|.+. -
T Consensus 332 ~~~~~~~h------------~~T~-~gnpl~~Aaa~a~L~~i~~~~l---~~~~~~~g~~l~~~~~~~~~~~~i~dvRG~ 395 (472)
T PRK08742 332 SRERAFLH------------SHSY-TGNPLACAAALATLDIFADDDV---IARNQPTAARMTQLAAQIGEHPHVADVRQA 395 (472)
T ss_pred CccCccCc------------CCCC-CccHHHHHHHHHHHHHHHHCCH---HHHHHHHHHHHHHHHHHHhcCCCeeeEecc
Confidence 0 00000 0011 1111222333444555544443 44455555566555543 33222 1
Q ss_pred -ceEEEeecCCCcccccccccchH-HHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHH
Q 048643 415 -SAVMDKLKPKYENCHSQQLVTEE-EAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQ 492 (506)
Q Consensus 415 -~~v~f~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~ 492 (506)
.++.+.+..... ..+. ........++.+++.++|.+. .+. | .++|+.. ....|++||+.+++.|+
T Consensus 396 Gl~~giel~~~~~-------~~~~~~~~~~~~~~~~~~~~~~Gll~-~~~---g-~vi~~~P-pL~it~~ei~~~~~~l~ 462 (472)
T PRK08742 396 GMVVAFELTRGGN-------KRTPFPPAARVGLHAYRAALARGVVL-RPL---G-DVLYWMP-PYCVDEAQLALLADTTR 462 (472)
T ss_pred ceEEEEEeccCcc-------ccccCCchhHHHHHHHHHHHHCCeEE-Eec---C-CEEEEEC-CCCCCHHHHHHHHHHHH
Confidence 334444422100 0000 000123356777788888754 322 3 4799987 56788999999999999
Q ss_pred HHHHHHHc
Q 048643 493 EQLEAFLT 500 (506)
Q Consensus 493 ~~~~~l~~ 500 (506)
+..+++.+
T Consensus 463 ~~l~~~~~ 470 (472)
T PRK08742 463 HAIDEAVA 470 (472)
T ss_pred HHHHHHhc
Confidence 99887754
No 360
>PRK06148 hypothetical protein; Provisional
Probab=99.14 E-value=4.3e-08 Score=112.00 Aligned_cols=318 Identities=12% Similarity=0.043 Sum_probs=177.6
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHH
Q 048643 131 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQI 210 (506)
Q Consensus 131 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~ 210 (506)
.+.+.++.+.|++++.-+.+ ..+|+++||+||..||..||... | ++.+|......|-...-+..+
T Consensus 662 ~~~~~~lAe~L~~~~p~~~~-------~v~f~nSGsEA~e~AlklAr~~t-------G-r~~ii~~~~~YHG~t~~a~s~ 726 (1013)
T PRK06148 662 HDAIVAYAERLTATLPDGLT-------VAFFVNSGSEANSLALRLARAHT-------G-QRDAIVLDHAYHGTTTELIDL 726 (1013)
T ss_pred CHHHHHHHHHHHHhCCCCcC-------EEEEeCCcHHHHHHHHHHHHHhc-------C-CCeEEEEcCCccCCCcchhhc
Confidence 34455666778887632212 57899999999999999999752 1 222344444455322222111
Q ss_pred h--------CCC-CCCeEEEecCCC--CCcc--------cCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC----
Q 048643 211 V--------GID-LKNFRAIKTTKS--SSYG--------LSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP---- 267 (506)
Q Consensus 211 ~--------G~g-~~~v~~v~~~~~--~~~~--------~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp---- 267 (506)
. +.+ ...+..++.... ..+. -..+.++++++.....+..+..|++.-.....|.+-|
T Consensus 727 s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~y 806 (1013)
T PRK06148 727 SPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESVAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGY 806 (1013)
T ss_pred CchhhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHHHHHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHH
Confidence 1 111 123333332100 0011 1124566666543333445666776655555677765
Q ss_pred hhHHHHHHHHhCCEEEeecccccccccCc-cchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccc
Q 048643 268 LKPLCDVAKQFGIWVHVDAAYAGSACICP-EFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEY 346 (506)
Q Consensus 268 l~~I~~ia~~~g~~lhVDaA~gg~~~~~~-~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~y 346 (506)
+++|.++|++||+.+++|+.+.|+..... -+.....|+ ..|.+++ -|.++..++.|++++++. +...+.....|
T Consensus 807 l~~lr~lc~~~g~llI~DEVqtGfGRtG~~~~a~e~~gv-~PDivt~--gK~lggG~Plgav~~~~e--i~~~~~~g~~~ 881 (1013)
T PRK06148 807 LREVYAMVRAAGGVCIADEVQVGFGRVGSHWWAFETQGV-VPDIVTM--GKPIGNGHPMGAVVTTRE--IADSFDNGMEY 881 (1013)
T ss_pred HHHHHHHHHHhCCEEEEEecccCCCCCCCcchhhhhcCC-Ccceeee--cccccCCcceEEEEEcHH--HHhhccCCCcc
Confidence 99999999999999999999976643322 111112244 5888887 599887788999988743 22333211001
Q ss_pred cCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcC----CCCc----c-ceE
Q 048643 347 LKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASD----KRVS----P-SAV 417 (506)
Q Consensus 347 l~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~----~~~~----p-~~v 417 (506)
. + |. .+.+........+|..+-.+ ++.++..++.++|.+.|+++ |-+. - .++
T Consensus 882 ~-~--------------Tf-~gnpla~aaa~a~L~~i~~e---~l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~Gl~~ 942 (1013)
T PRK06148 882 F-N--------------TF-GGNPVSCAIGLAVLDIIEDE---DLQRNALEIGNYLLAGLRELQDRFDIIGDVRGMGLFL 942 (1013)
T ss_pred c-c--------------CC-CCCHHHHHHHHHHHHHHhhc---cHHHHHHHHHHHHHHHHHHHHHhCCCceEEeeeceEE
Confidence 1 0 11 11112223334445555444 34566666777777777653 2111 1 333
Q ss_pred EEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 048643 418 MDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEA 497 (506)
Q Consensus 418 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~ 497 (506)
.+.+..... +.+........+.+.+.++|++ +.+.... ..++|+.. ....|+++||++++.|+++..+
T Consensus 943 gvel~~~~~---------~~~~~~~~~~~i~~~~~~~Gvl-~~~~g~~-~~vlr~~P-pl~it~~~id~~l~~l~~~l~~ 1010 (1013)
T PRK06148 943 GIELVTDRK---------TKAPATAIARYVKNGARERGIL-IGTEGPH-DNVLKIRP-PLIFSRADADHLLEVLDDVLAA 1010 (1013)
T ss_pred EEEecCCcc---------ccCccHHHHHHHHHHHHhCCeE-EeccCCC-CCEEEEeC-CccCCHHHHHHHHHHHHHHHHH
Confidence 444432100 0000123456788888888975 4332111 36799987 5678889999999999999876
Q ss_pred HH
Q 048643 498 FL 499 (506)
Q Consensus 498 l~ 499 (506)
+.
T Consensus 1011 ~~ 1012 (1013)
T PRK06148 1011 AL 1012 (1013)
T ss_pred Hh
Confidence 54
No 361
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.14 E-value=1e-07 Score=100.06 Aligned_cols=323 Identities=11% Similarity=0.028 Sum_probs=172.7
Q ss_pred HHHHHHHHHHHHHcCCCCccccCCCCcEEEc-CCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHH
Q 048643 132 ELENIVMDWLGQMLKLPKSFLFSGNGGGVIQ-GTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQI 210 (506)
Q Consensus 132 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t-~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~ 210 (506)
..+.++.+.+.+++.-+-. .....+|+ ++||+|+..|+..||... | ++.+|.+....|-...-+..+
T Consensus 106 ~~~~~la~~L~~~~p~~~~----~~~~v~f~~~SGSEAve~AlklAr~~t-------g-r~~ii~~~~~yHG~t~~als~ 173 (464)
T PRK06938 106 PVKDQFVQDLFASLPEAFA----REAKIQFCGPTGTDAVEAALKLVKTAT-------G-RSTVLSFQGGYHGMSQGALSL 173 (464)
T ss_pred HHHHHHHHHHHHhCccccc----ccceEEEeCCCcHHHHHHHHHHHHHhh-------C-CCeEEEECCccCCccHHHHhh
Confidence 4444555667766531100 00023454 699999999999999752 1 233455555566444333333
Q ss_pred hCC-------C--CCCeEEEecCCCCCc----------ccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC----
Q 048643 211 VGI-------D--LKNFRAIKTTKSSSY----------GLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP---- 267 (506)
Q Consensus 211 ~G~-------g--~~~v~~v~~~~~~~~----------~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp---- 267 (506)
.|. + ...+..+|....... ..+.+.+++.+++.......+.+|++.-.....|.+-|
T Consensus 174 t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~y 253 (464)
T PRK06938 174 MGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRANLHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEW 253 (464)
T ss_pred cCCccccccCCCCCCCcEEeCCCccccccccCchhhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHH
Confidence 221 0 113455655321100 12367788877542211123455666543334466533
Q ss_pred hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCcccc
Q 048643 268 LKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYL 347 (506)
Q Consensus 268 l~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl 347 (506)
+++|.++|++||+.+++|..+.|+.....-+.....|+ ..|.+++ -|.++..++.|+++.++. + ..+. +.+.
T Consensus 254 l~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~e~~gv-~PDiv~~--gKglggG~PlsAv~~~~~--~-~~~~--~~~~ 325 (464)
T PRK06938 254 LRGLRRITEEAGIPLIVDEIQSGFGRTGKMFAFEHAGI-IPDVVVL--SKAIGGSLPLAVVVYREW--L-DTWQ--PGAH 325 (464)
T ss_pred HHHHHHHHHHcCCEEEEeccccCCCcCcHHHHHHhcCC-CCCEEEe--eccccCCCceEEEeehhH--h-hccC--CCCC
Confidence 89999999999999999999877643322222112244 5798887 488876688899888753 2 2221 1110
Q ss_pred CCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHc----CCCCc----c-ceEE
Q 048643 348 KNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVAS----DKRVS----P-SAVM 418 (506)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~----~~~~~----p-~~v~ 418 (506)
.+ |. .+.+.......++|..+-.+ +++++..++.++|.+.|++ .|.+. . .++.
T Consensus 326 ~~--------------T~-~gnpla~Aaa~a~L~~l~~~---~l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~Glm~g 387 (464)
T PRK06938 326 AG--------------TF-RGNQMAMAAGSATLRYIKEH---RLAEHAAAMGERLREHLRQLQRDYPQLGDVRGRGLMLG 387 (464)
T ss_pred CC--------------CC-CcCHHHHHHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEE
Confidence 00 11 11111222333444444343 3455666677777777765 33221 1 3344
Q ss_pred EeecCCC-cccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 048643 419 DKLKPKY-ENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEA 497 (506)
Q Consensus 419 f~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~ 497 (506)
+.+.... ....... ... .......+.+.+.++|.+. .+... ...++|+.. ....|++||+.+++++++..++
T Consensus 388 ie~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~Gll~-~~~g~-~~~~l~~~P-pl~it~~eid~~~~~l~~~l~~ 460 (464)
T PRK06938 388 VEIVDPQGEPDALGH---PPA-NGELASLIQRECLRRGLIL-ELGGR-HGSVVRFLP-PLIITAEQIDEVAEIFAEAVAA 460 (464)
T ss_pred EEeccCccccccccc---CCc-cHHHHHHHHHHHHHCCeEE-eecCC-CCCEEEEEC-CCccCHHHHHHHHHHHHHHHHH
Confidence 4442210 0000000 000 0134566778888888743 33211 135799986 4667889999999999998876
Q ss_pred HH
Q 048643 498 FL 499 (506)
Q Consensus 498 l~ 499 (506)
+.
T Consensus 461 ~~ 462 (464)
T PRK06938 461 AV 462 (464)
T ss_pred Hh
Confidence 54
No 362
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.13 E-value=1.8e-07 Score=98.30 Aligned_cols=314 Identities=11% Similarity=0.027 Sum_probs=163.8
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHH
Q 048643 131 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQI 210 (506)
Q Consensus 131 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~ 210 (506)
+..+.++.+.|++++.-+.. ...+|+++||+|+..|+..||... + ++.+|-.....|-...-+..+
T Consensus 96 ~~~~~~la~~L~~~~p~~~~------~~v~f~~sGseA~e~AlklAr~~t-------g-r~~ii~~~~~yHG~t~~~ls~ 161 (451)
T PRK06918 96 YEPYIELAEKLAALAPGSFD------KKVLFLNSGAEAVENAVKIARKYT-------K-RQGIISFSRGFHGRTLMTMTM 161 (451)
T ss_pred cHHHHHHHHHHHHhCCCCCC------CEEEEcCCcHHHHHHHHHHHHHHh-------C-CCcEEEECCCcCccchhhhhh
Confidence 34556677888888642211 157999999999999999999752 1 223444444555433333332
Q ss_pred hCC--------C--CCCeEEEecCCCCC--cccC--------HHHHHHHHHHHHhcCCccEEEEEeccCCCCCccc----
Q 048643 211 VGI--------D--LKNFRAIKTTKSSS--YGLS--------PDSLLTQINLDVEAGLVPLFLCATIGTTAITAVD---- 266 (506)
Q Consensus 211 ~G~--------g--~~~v~~v~~~~~~~--~~~d--------~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~id---- 266 (506)
.|- + ...+..+|...... ..+. .+.+++.+.... .+....+|++.-.....|.+-
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~iAavi~EPi~g~gG~~~~~~~ 240 (451)
T PRK06918 162 TSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKNFFISEV-APETIAAVVMEPVQGEGGFIVPSKK 240 (451)
T ss_pred cCCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHHHHHHHHHHHhhc-CCCceEEEEECcccCCCCCccCCHH
Confidence 221 0 11244444321000 0111 123343332111 222344555544333345542
Q ss_pred ChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccc
Q 048643 267 PLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEY 346 (506)
Q Consensus 267 pl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~y 346 (506)
-+++|.++|++||+|++.|..|.++......+.....++ ..|.++ .-|.++..+..|+++.+.. +.+.+...
T Consensus 241 ~l~~l~~l~~~~gillI~DEV~tg~gr~g~~~a~~~~~v-~pDi~t--~sK~l~~G~pig~v~~~~~--i~~~~~~~--- 312 (451)
T PRK06918 241 FVQEVRNICSEHGILFVADEIQTGFARTGKYFAIEHFDV-VPDLIT--VSKSLGAGVPISGVIGRKE--IMDESAPG--- 312 (451)
T ss_pred HHHHHHHHHHHcCCEEEEeccccCcCccCceehhHhcCC-CCCEEe--eehhhcCCCccEEEEEcHH--HHhccCCC---
Confidence 289999999999999999999987643221111111122 367554 5799987788899887642 22222110
Q ss_pred cCCccccCCCccCCCCccccCCCCCCchHHHH---HHHHhchhHHHHHHHHHHHHHHHHHHHHHc----CCCCc---c--
Q 048643 347 LKNKATESKQVVDYKDWQITLSRRFRSLKLWL---VIRNYGVANLRHFLRSHVNMAKLFERLVAS----DKRVS---P-- 414 (506)
Q Consensus 347 l~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~---~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~----~~~~~---p-- 414 (506)
. .. .+. ++ ..+...+ ++..+..+.+. ++..++.+++.++|++ .+.+. +
T Consensus 313 ~-~~------------~T~-~g---~~l~~aaa~a~l~~i~~~~~~---~~~~~~g~~l~~~l~~l~~~~~~~~~vrg~G 372 (451)
T PRK06918 313 E-LG------------GTY-AG---SPLGCAAALAVLDIIEKENLN---DRAIELGKVVMNRFEEMKNKYNCIGDVRGLG 372 (451)
T ss_pred C-cC------------cCC-Cc---CHHHHHHHHHHHHHHHHCCHH---HHHHHHHHHHHHHHHHHHhhCCCceeeccce
Confidence 0 00 010 11 2233333 44444333333 3344455555555543 33222 2
Q ss_pred ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHH
Q 048643 415 SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQ 494 (506)
Q Consensus 415 ~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~ 494 (506)
.++.+.+..+.. .... -.....++.+.+.++|..+...... + .++|+++. ...++++|+++++.|+++
T Consensus 373 ~~~~~~~~~~~~------~~~~---~~~~~~~l~~~~~~~Gvlv~~~~~~-~-~~lrl~p~-l~~t~~~id~~l~~l~~~ 440 (451)
T PRK06918 373 AMCAFELVQDRK------TKEP---DKTLTANICKEANKRGLLLLSAGTY-G-NVIRVLMP-LVITDEQLEEGLTIIEES 440 (451)
T ss_pred eEEEEEEccCCC------cCCC---cHHHHHHHHHHHHHCCeEEeecCCC-C-CEEEEECC-CccCHHHHHHHHHHHHHH
Confidence 444443321100 0000 0234567778888889754432222 2 57999873 336788999999999999
Q ss_pred HHHHH
Q 048643 495 LEAFL 499 (506)
Q Consensus 495 ~~~l~ 499 (506)
.+++.
T Consensus 441 l~~~~ 445 (451)
T PRK06918 441 LQACY 445 (451)
T ss_pred HHHHH
Confidence 88764
No 363
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.12 E-value=2.1e-07 Score=97.71 Aligned_cols=324 Identities=12% Similarity=0.053 Sum_probs=172.7
Q ss_pred HHHHHHHHHHHHHHcCCCC-ccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHH
Q 048643 131 TELENIVMDWLGQMLKLPK-SFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQ 209 (506)
Q Consensus 131 ~~lE~~~~~~la~l~g~~~-~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~ 209 (506)
+..+.++.+.|++++.-.. .. ...+++++||+|+..|+..||... + ++.+|......|-...-+..
T Consensus 100 ~~~~~~lAe~L~~~~p~~~~~~-----~~~f~~~SGsEAve~AlklAr~~t-------g-r~~Ii~~~~~yHG~t~~als 166 (459)
T PRK06931 100 TPLKDAFSEYLLSLLPGQGKEY-----CLQFTGPSGADAVEAAIKLAKTYT-------G-RSNVISFSGGYHGMTHGALA 166 (459)
T ss_pred CHHHHHHHHHHHHhCCCccccc-----eEEEeCCCcHHHHHHHHHHHHHhc-------C-CCeEEEECCCcCCccHHHHh
Confidence 4566667788888764221 10 023555899999999999999752 1 22344444455544333333
Q ss_pred HhCCC---------CCCeEEEecCCCCCc------ccCHHHHHHHHHHHHh----cCCccEEEEEeccCCCCCcccC---
Q 048643 210 IVGID---------LKNFRAIKTTKSSSY------GLSPDSLLTQINLDVE----AGLVPLFLCATIGTTAITAVDP--- 267 (506)
Q Consensus 210 ~~G~g---------~~~v~~v~~~~~~~~------~~d~~~L~~~i~~~~~----~g~~p~~Vv~t~gtt~tG~idp--- 267 (506)
+.|.. ...+..+|....... .-+.+.+++.+++... .+..+.+|++.-.....|.+-|
T Consensus 167 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~ 246 (459)
T PRK06931 167 VTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTYYFENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVE 246 (459)
T ss_pred hcCCcccccCCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHH
Confidence 32210 113455554311000 1134555444443322 1223455665444444465533
Q ss_pred -hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccc
Q 048643 268 -LKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEY 346 (506)
Q Consensus 268 -l~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~y 346 (506)
+++|.++|++||+.+++|+.+.|+.....-+.....|+ ..|.+++ -|.++..++.|++..++. + +.+. +..
T Consensus 247 yl~~lr~lc~~~g~LlI~DEV~tGfGRtG~~~a~~~~gv-~PDivt~--gK~l~gG~Pi~av~~~~~--~-~~~~--~~~ 318 (459)
T PRK06931 247 WLQKIREVTQKHGILLIVDEVQAGFARTGKMFAFEHAGI-EPDIIVM--SKAVGGGLPLAVLGIKKE--F-DAWQ--PGG 318 (459)
T ss_pred HHHHHHHHHHHcCCEEEEecchhcCCcCchHHHhhhcCC-CCCEEEe--cccccCCcceeeeeeHHH--H-hhcc--CCC
Confidence 89999999999999999999877643322222222344 5888887 488876677888776642 2 2332 100
Q ss_pred cCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHc----CCCCc----c-ceE
Q 048643 347 LKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVAS----DKRVS----P-SAV 417 (506)
Q Consensus 347 l~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~----~~~~~----p-~~v 417 (506)
.. .|. .+.+........+|..+..++ ..++..++.++|.+.|++ .|.+. . .++
T Consensus 319 ~~--------------~T~-~gnpla~aaala~L~~l~~~~---l~~~~~~~G~~l~~~L~~l~~~~~~i~~vrG~Glm~ 380 (459)
T PRK06931 319 HT--------------GTF-RGNQLAMATGLTTLKILKEEN---LAQNAAERGEWLKAQLAELQKRYPCIGNVRGRGLMI 380 (459)
T ss_pred CC--------------CCC-CCCHHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHHHhCCCeEeEecCceEE
Confidence 00 011 111112233344455444443 445566666666666654 33222 1 444
Q ss_pred EEeecCCC-cccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 048643 418 MDKLKPKY-ENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLE 496 (506)
Q Consensus 418 ~f~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~ 496 (506)
.+.+.... .+........+ .....++.+.+.++|.+. .+.. ....++|+.. ....|++||+.+++++++...
T Consensus 381 giel~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~Gvl~-~~~~-~~~~~l~~~P-pl~it~~eid~~~~~l~~~l~ 453 (459)
T PRK06931 381 GIEIVDERQPADAMGSYPAD----GELAAAIQKACFENGLLL-ERGG-RNGNVVRLLP-PLLITQAECEEFIDRFEQALL 453 (459)
T ss_pred EEEEccCcccccccccCCcc----HHHHHHHHHHHHHCCcEE-eecC-CCCCEEEEEC-CCCcCHHHHHHHHHHHHHHHH
Confidence 45443210 00000000000 123466778888889753 3321 1235799988 567788999999999999988
Q ss_pred HHHc
Q 048643 497 AFLT 500 (506)
Q Consensus 497 ~l~~ 500 (506)
++.+
T Consensus 454 ~~~~ 457 (459)
T PRK06931 454 AAVK 457 (459)
T ss_pred HHHh
Confidence 7654
No 364
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.10 E-value=5.1e-08 Score=94.22 Aligned_cols=322 Identities=12% Similarity=0.073 Sum_probs=191.7
Q ss_pred cccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEc-CCchHHHHHHHHHHHHHHHHhhcccCCCCeEEE---eCCC
Q 048643 124 WISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQ-GTTCEAILCTLTAARDRVLNKIGRENISKLVVY---GSDQ 199 (506)
Q Consensus 124 ~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t-~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~---~s~~ 199 (506)
|.......++|.-+.+.--+.||++++. ++.-++ -+||-||+.+..+... |..+|. .++-
T Consensus 78 YGGne~ID~iE~LCq~RALeaF~ldp~k-----WGVNVQp~SGSPANfavYtall~-----------Ph~RiMGLDLP~G 141 (477)
T KOG2467|consen 78 YGGNEYIDQIELLCQKRALEAFGLDPEK-----WGVNVQPYSGSPANFAVYTALLK-----------PHERIMGLDLPSG 141 (477)
T ss_pred cCcchHHHHHHHHHHHHHHHHhCCCHHH-----CceeeccCCCCchhhHHHhhhcC-----------CCCeeeeccCCCC
Confidence 3344467889999999999999998764 133333 3788999877665543 222222 3444
Q ss_pred CchHHHH---HHHHhCCCC-CCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHH
Q 048643 200 THCALQK---AAQIVGIDL-KNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVA 275 (506)
Q Consensus 200 ~H~s~~k---a~~~~G~g~-~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia 275 (506)
.|.|.-- .-++..... -+-.+..+|+. +|-||.+.||+.-..- +|-++| +|++.....-|...+.+||
T Consensus 142 GHLsHGy~T~~kkISa~SiyFeSmPYkv~~~-TG~IDYD~Le~~A~~f-----rPk~ii--aG~SaY~R~~DYaR~R~Ia 213 (477)
T KOG2467|consen 142 GHLSHGYQTPTKKISATSIYFESMPYKVDPS-TGYIDYDKLEKTATLF-----RPKLII--AGTSAYSRLIDYARFRKIA 213 (477)
T ss_pred CccccccccCCceeeeeeeecccCceeeCCC-CCceehHHHHHHHHhc-----CCcEEE--eccccchhhccHHHHHHHH
Confidence 5543211 001111100 01123344543 6899999999876553 465544 4566677778899999999
Q ss_pred HHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhh-cCCccccCCccccC
Q 048643 276 KQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSL-STNPEYLKNKATES 354 (506)
Q Consensus 276 ~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~-~~~~~yl~~~~~~~ 354 (506)
.+.|++|.+|-||-.++........- .+.||.||...||.|-.|.+ |++++|..-.-...- .....|-.
T Consensus 214 d~~gA~Lm~DMAHISgLVAA~vipsP---Fey~DiVTTTTHKsLRGPRg-~mIFyRkGvk~~~~k~g~~i~ydl------ 283 (477)
T KOG2467|consen 214 DKVGAYLMADMAHISGLVAAGVIPSP---FEYCDIVTTTTHKSLRGPRG-AMIFYRKGVKSIKPKQGKEILYDL------ 283 (477)
T ss_pred HhcCceeehhhhhHHHHHhcccCCCc---ccccceeeccccccccCCcc-eeEEEeccCCcCCCCCCCcceech------
Confidence 99999999999995554432222111 45899999999999999975 566666532111000 00111211
Q ss_pred CCccCCCC-ccccCCCCCCc-hHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc-----c--ceEEEeecCCC
Q 048643 355 KQVVDYKD-WQITLSRRFRS-LKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS-----P--SAVMDKLKPKY 425 (506)
Q Consensus 355 ~~~~~~~~-~~~~~sr~~~a-l~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~-----p--~~v~f~~~~~~ 425 (506)
....++.- -++|++-.-.. .++-.+|+.-....|.+...+-..+++.|.+.|.+. |++ . .+|.+.+.+.+
T Consensus 284 E~kINfaVFP~lQGGPHNhtIaalAvALkQa~tpefk~Yq~qV~~Nakala~~l~~~-Gy~lvtgGTDnHlvLvDLr~~G 362 (477)
T KOG2467|consen 284 EDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKEYQKQVLKNAKALASALISR-GYKLVTGGTDNHLVLVDLRPKG 362 (477)
T ss_pred hhhhhhhccccccCCCCcchHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHc-CceEecCCccceEEEEeccccC
Confidence 11122211 25566655443 466678888888889999999999999999999987 776 2 66777776653
Q ss_pred cccccccccchHHHHHHHHHHHHHHH----HhcCcEEEeeeeECCEEEEEEEe---cCCCCCHHHHHHHHHHHHHHH
Q 048643 426 ENCHSQQLVTEEEAINEFNRELLESI----NASGKAYMTHAVCGGIYAMRFAV---GATLTEERHVMVAWTMVQEQL 495 (506)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~l~~~l----~~~g~~~~~~~~~~g~~~lR~~~---~~~~tt~edi~~li~~l~~~~ 495 (506)
. +.. ..+++++.+ +++-+ .+....--.+-+|+.. ++--..|+|.+++.+-|.+.+
T Consensus 363 ~---------dGa----rvE~vle~~~I~~NKNtv--pGD~Sal~PgGiRiGtPAmTsRG~~e~df~~v~~fi~~av 424 (477)
T KOG2467|consen 363 V---------DGA----RVEKVLELCHIALNKNTV--PGDKSALSPGGIRIGTPAMTSRGFGEEDFEKVADFIDRAV 424 (477)
T ss_pred C---------chH----HHHHHHHHhhhhhcCCcC--CCCccccCCCceeccchhhcccCccHHHHHHHHHHHHHHH
Confidence 2 222 234444432 33221 1111111234578765 223334678888777776543
No 365
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.08 E-value=1.8e-07 Score=97.19 Aligned_cols=304 Identities=10% Similarity=-0.000 Sum_probs=162.0
Q ss_pred HHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHh
Q 048643 132 ELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIV 211 (506)
Q Consensus 132 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~ 211 (506)
+...++.+.|+++..-+.+ ..+|+++||+|+..|+..||.....+ |..+ +..+|......|-...-+..+.
T Consensus 83 ~~~~~lae~L~~~~p~~~~-------~v~f~~SGseA~e~AlklAr~~~~~~-g~~~-r~~ii~~~~~yHG~t~~als~~ 153 (422)
T PRK05630 83 EPAIKLTRKLLNLTDNGLD-------HVFYSDSGSVSVEVAIKMALQYSKGQ-GHPE-RTRLLTWRSGYHGDTFAAMSVC 153 (422)
T ss_pred HHHHHHHHHHHhhCCCCcC-------EEEEeCCcHHHHHHHHHHHHHHHHhc-CCCC-CcEEEEECCCcCCccHHHhccC
Confidence 3445566777777632212 57899999999999999999864221 2111 2234555555664333333322
Q ss_pred CC--------C--CCCeEEEecCCCCCcccCH-------HHHHHHHHHHHhcCCccEEEEEecc-CCCCCcc----cChh
Q 048643 212 GI--------D--LKNFRAIKTTKSSSYGLSP-------DSLLTQINLDVEAGLVPLFLCATIG-TTAITAV----DPLK 269 (506)
Q Consensus 212 G~--------g--~~~v~~v~~~~~~~~~~d~-------~~L~~~i~~~~~~g~~p~~Vv~t~g-tt~tG~i----dpl~ 269 (506)
+- + ...+..+|.... ...+. +.+++.+.+ ....|++.-. ....|.+ +.++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~p~~~~--~~~~~~~~~~~~~~~~~~~~~------~iAAvi~EPi~qg~gG~~~~~~~~l~ 225 (422)
T PRK05630 154 DPEGGMHSLWKGTLPEQIFAPAPPV--RGSSPQEISEYLRSLELLIDE------TVAAIIIEPIVQGAGGMRFHDVALIE 225 (422)
T ss_pred CCcccccccccccCCCCeEcCCCcc--cCCChHHHHHHHHHHHHHHhh------ceEEEEEechhcCcCCcccCCHHHHH
Confidence 21 0 013344443311 01122 233333332 2334444431 2233443 4589
Q ss_pred HHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCC-cceEEEEeCchhHHhhhcCC--ccc
Q 048643 270 PLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTL-DCCCLWVKDPSALVSSLSTN--PEY 346 (506)
Q Consensus 270 ~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~-~~g~~~~r~~~~l~~~~~~~--~~y 346 (506)
+|.++|++||+.+++|.++.|+.....-+.....++ ..|.+++ -|.++..+ ..|++++++.- .+.+... ...
T Consensus 226 ~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv-~PDi~t~--gK~l~gG~~p~~av~~~~~i--~~~~~~~~~~~~ 300 (422)
T PRK05630 226 GVRTLCDKHDILLIADEIATGFGRTGELFATLAAGV-TPDIMCV--GKALTGGFMSFAATLCTDKV--AQLISTPNGGGA 300 (422)
T ss_pred HHHHHHHHcCCEEEEecceeCCCcCchhhHHHhcCC-CCCeeee--echhhcCccccceeeccHHH--HHHHhccCCCCc
Confidence 999999999999999999876533221111112233 5777765 69886543 46777766432 2333211 000
Q ss_pred cCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcC---CCCc----c-ceEE
Q 048643 347 LKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASD---KRVS----P-SAVM 418 (506)
Q Consensus 347 l~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~---~~~~----p-~~v~ 418 (506)
+.. . .|. .+.+........+|+.+..+. ..++..++.++|.+.|+++ |.+. - .++.
T Consensus 301 ~~h----------~--~T~-~g~Pla~aaa~aaL~~l~~~~---~~~~~~~~g~~l~~~L~~l~~~~~v~~vRg~Gl~~~ 364 (422)
T PRK05630 301 LMH----------G--PTF-MANPLACAVAHASLEIIETGM---WRKQVKRIEAELIAGLSPLAHLPGVADVRVLGAIGV 364 (422)
T ss_pred ccc----------C--CCC-cCCHHHHHHHHHHHHHHHhCc---HHHHHHHHHHHHHHHHHHhhcCCCeeeeeccccEEE
Confidence 000 0 011 111122233445555554443 3456677777777777643 3222 1 4444
Q ss_pred EeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 048643 419 DKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLE 496 (506)
Q Consensus 419 f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~ 496 (506)
+.+..+. ....+.+.+.++|.. +.+. | .++|+.. ....|++||+.+++.|+++.+
T Consensus 365 ie~~~~~-----------------~~~~~~~~~~~~Gl~-~~~~---g-~~l~~~P-pL~it~~~i~~~~~~l~~al~ 419 (422)
T PRK05630 365 VEMEQPV-----------------DMEEATQAAVDHGVW-LRPF---G-RLVYVMP-PYITTSEQIAQICAALAAAVK 419 (422)
T ss_pred EEECCcc-----------------cHHHHHHHHHHCCeE-EEec---C-CEEEEEC-CccCCHHHHHHHHHHHHHHHh
Confidence 4443210 124666777888864 4332 3 5789887 567889999999999998864
No 366
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.06 E-value=3.6e-07 Score=95.44 Aligned_cols=305 Identities=11% Similarity=0.057 Sum_probs=162.0
Q ss_pred hhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHh-hc-------c----------cCCC
Q 048643 129 AATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNK-IG-------R----------ENIS 190 (506)
Q Consensus 129 ~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~-~~-------~----------~~~~ 190 (506)
...++.+.+.+.+++++. ... ...+|+++||+||..|+..||.....+ .+ . .|.+
T Consensus 102 ~~~~la~~l~~~l~~~~p--~~~-----~~v~f~~SGsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~ 174 (464)
T TIGR00699 102 PSKDWAKILKEGILKVAP--KGQ-----DQVWTGMSGSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSP 174 (464)
T ss_pred HHHHHHHHHHHhHHhhCC--CCc-----CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCc
Confidence 334454444444455543 111 157999999999999999998753211 00 0 0111
Q ss_pred C-eEEEeCCCCchHHHHHHHHhCCCC--------CCeEEEecCCC-CC-----------cccCHHHHHHHHHHHHhcCCc
Q 048643 191 K-LVVYGSDQTHCALQKAAQIVGIDL--------KNFRAIKTTKS-SS-----------YGLSPDSLLTQINLDVEAGLV 249 (506)
Q Consensus 191 ~-~~v~~s~~~H~s~~ka~~~~G~g~--------~~v~~v~~~~~-~~-----------~~~d~~~L~~~i~~~~~~g~~ 249 (506)
+ .+|......|-...-+....|-.. ..+..+|.... .. ..-+++.|++++++ .+..
T Consensus 175 r~~ii~~~~syHG~t~~als~t~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~---~~~~ 251 (464)
T TIGR00699 175 DLSILSFKGAFHGRLFGSLSTTRSKPIHKLDIPAFDWPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKK---WHKP 251 (464)
T ss_pred CCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCceecCCCCcccccccccccchhHHHHHHHHHHHHHHh---cCCc
Confidence 2 345555556655444444433210 12223332210 00 01135566777753 2223
Q ss_pred cEEEEEeccCCCCCcccC----hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCC-CCCeeEEcCccccCCCCc
Q 048643 250 PLFLCATIGTTAITAVDP----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVE-GADSFSLNAHKWFFTTLD 324 (506)
Q Consensus 250 p~~Vv~t~gtt~tG~idp----l~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~-~aDsi~~~~hK~l~~p~~ 324 (506)
+..|++.-.....|.+-| +++|.++|++||+.+++|.++.|+.....-+.....|+. ..|.+++ -|.++.
T Consensus 252 iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGrtG~~fa~e~~gv~~~PDi~t~--gK~lg~--- 326 (464)
T TIGR00699 252 VAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQTGVGATGKFWAHEHWNLDDPPDMVTF--SKKFQT--- 326 (464)
T ss_pred EEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeeeeeCCCCCcchhHHHhcCCCCCCCEEEe--hhhhcc---
Confidence 556666655556687877 999999999999999999998776432221222223453 5888776 477731
Q ss_pred ceEEEEeCchhHHhhhcC-CccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHH
Q 048643 325 CCCLWVKDPSALVSSLST-NPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFE 403 (506)
Q Consensus 325 ~g~~~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~ 403 (506)
+|+++.++ .+.. .+.+..+ |. .+-+......-++|+.+-.++ ++++..++.++|.
T Consensus 327 gG~~~~~~------~~~~~~~~~~~~--------------T~-~gnp~~~aaa~a~L~~l~~~~---l~~~~~~~g~~l~ 382 (464)
T TIGR00699 327 AGYFFHDP------AFRPNKPYRQFN--------------TW-MGDPSRALILREIIQEIKRKD---LLENVAHVGDYLY 382 (464)
T ss_pred CCccccch------hccCCCCccccc--------------CC-CCCHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHH
Confidence 23322221 1110 0000000 00 111111223333455554333 4455555666666
Q ss_pred HHHHc----CCC-C---c--c--ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEE
Q 048643 404 RLVAS----DKR-V---S--P--SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMR 471 (506)
Q Consensus 404 ~~l~~----~~~-~---~--p--~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR 471 (506)
+.|++ .|. + + . .++.+.+.. .....++.+.+.++|.+ +... |...+|
T Consensus 383 ~~L~~l~~~~~~~i~~vRg~G~Glm~gie~~~-----------------~~~~~~i~~~~~~~Gvl-~~~~---g~~~ir 441 (464)
T TIGR00699 383 TGLEDLQKKYPEFIQNLRGKGRGTFIAWDTPD-----------------EAKRDKLLKKARNNGVN-IGGC---GVKAIR 441 (464)
T ss_pred HHHHHHHHhCCCceeeecccCeEEEEEEecCC-----------------HHHHHHHHHHHHHCCcE-EecC---CCCeEE
Confidence 66654 441 1 1 1 333343321 12346788888888874 3332 456899
Q ss_pred EEecCCCCCHHHHHHHHHHHHHH
Q 048643 472 FAVGATLTEERHVMVAWTMVQEQ 494 (506)
Q Consensus 472 ~~~~~~~tt~edi~~li~~l~~~ 494 (506)
+.. ....+++||+.++++|+++
T Consensus 442 ~~P-pl~it~~eid~~~~~l~~~ 463 (464)
T TIGR00699 442 LRP-MLVFQKHHADIFLEIISKI 463 (464)
T ss_pred EeC-CCCCCHHHHHHHHHHHHHh
Confidence 988 5678889999999999875
No 367
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=99.06 E-value=6.5e-08 Score=94.35 Aligned_cols=298 Identities=12% Similarity=0.058 Sum_probs=175.7
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCe-EEEeCCCCchHH
Q 048643 126 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKL-VVYGSDQTHCAL 204 (506)
Q Consensus 126 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~-~v~~s~~~H~s~ 204 (506)
.+.....+-.++.+.+++|+++|+++ .-+++.+|+|...-++.+-.... .+. .|....-+..+.
T Consensus 44 Rsk~~~~v~~~a~~~lreLl~iPd~Y-----~VlflqGGat~qf~~~p~nLl~~----------~~~~yv~~g~Ws~~a~ 108 (365)
T COG1932 44 RSKEFKNVLEEAEKDLRELLNIPDDY-----KVLFLQGGATGQFAMAPMNLLGK----------RGTDYVDTGAWSEFAI 108 (365)
T ss_pred ccHHHHHHHHHHHHHHHHHhCCCCCc-----eEEEEcCccHHHHHHHHHhhhcc----------cCceeEeeeehhHhHH
Confidence 34456666677889999999999987 24566667765554444433221 111 233332333444
Q ss_pred HHHHHHhC-CCCCCeEEEecCCCCCc-ccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc-cChhHHHHHHHHhCCE
Q 048643 205 QKAAQIVG-IDLKNFRAIKTTKSSSY-GLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV-DPLKPLCDVAKQFGIW 281 (506)
Q Consensus 205 ~ka~~~~G-~g~~~v~~v~~~~~~~~-~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i-dpl~~I~~ia~~~g~~ 281 (506)
..+-++.. . ++..+.....+-+ -.+++... +.++ -.+|..+...|.+|.- .+...+.. +..
T Consensus 109 ~eA~~~~~~~---~~~~~~~~~~~~~~iP~~~~~~--~~~~------~ayv~~~~NeTi~Gv~v~~~p~~~~-----~~~ 172 (365)
T COG1932 109 KEAKKVGKQP---KLIDARIEEAGYGSIPDLSKWD--FSDN------DAYVHFCWNETISGVEVPELPDIGS-----DGL 172 (365)
T ss_pred HHHHHhcccc---cccccceeccCccCCCChhhcc--cCCC------ccEEEEecCCcccceEccCCCCCCC-----Cce
Confidence 44433332 2 2222221111111 22333222 2221 1268888888888854 44443332 167
Q ss_pred EEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcC-Ccc---ccCCccccCCCc
Q 048643 282 VHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLST-NPE---YLKNKATESKQV 357 (506)
Q Consensus 282 lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~-~~~---yl~~~~~~~~~~ 357 (506)
+++|++-+.+....+ +.+.|.|+...+|.++ |-|.+++++|+... .+.-+. .|. |.... +.+..
T Consensus 173 ~v~D~SS~ilsr~iD--------vsk~dviyagaQKnlG-paGltvvIvr~~~l-~r~~~~~~P~if~y~~~~--~~~s~ 240 (365)
T COG1932 173 LVADASSAILSRPID--------VSKYDVIYAGAQKNLG-PAGLTVVIVRPDLL-ERAESYTLPSIFDYLTHA--DNGSM 240 (365)
T ss_pred EEEecccHHhcCCCC--------hhHcceEEEehhhccC-ccceEEEEEcHHHH-hcccccCCchHhhchhhh--ccCCc
Confidence 889987655544443 4488999999999998 56688999986532 222111 111 11110 00000
Q ss_pred cCCCCccccCCCCCCc-hHHHHH---HHHh-chhHHHHHHHHHHHHHHHHHHHHHcCCCCc----c-----ceEEEeecC
Q 048643 358 VDYKDWQITLSRRFRS-LKLWLV---IRNY-GVANLRHFLRSHVNMAKLFERLVASDKRVS----P-----SAVMDKLKP 423 (506)
Q Consensus 358 ~~~~~~~~~~sr~~~a-l~~~~~---l~~~-G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~----p-----~~v~f~~~~ 423 (506)
+ .+ -+ +.++.. ++.+ ..-|++++.++..+.++.|++.+.+.+.+. | ..|||.+..
T Consensus 241 y--------NT---Pptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~s~fy~~~v~~~~RS~mnV~f~~~~ 309 (365)
T COG1932 241 Y--------NT---PPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDKSDFYRNLVAKANRSRMNVTFTLVD 309 (365)
T ss_pred c--------CC---cHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCccccccchhhccceeEEEEcCc
Confidence 0 11 11 222222 2322 446899999999999999999999984434 2 779999864
Q ss_pred CCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 048643 424 KYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEA 497 (506)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~ 497 (506)
.++++.+.+++.+.|.++..+. +-.+-+|+++-| ....++++.|++-++.+.++
T Consensus 310 -----------------~~ld~~fv~eae~~gl~~lkGh--r~vgGmRasiyn-A~~~e~veaL~~fm~~f~~~ 363 (365)
T COG1932 310 -----------------AELDKGFVAEAEAAGLIYLKGH--RSVGGLRASIYN-AVPLEDVEALTDFMDWFEET 363 (365)
T ss_pred -----------------HHHHHHHHHHHHHcCCceeccc--cCCCceeeeeec-CCCHHHHHHHHHHHHHHHHh
Confidence 4677888888888898777663 323349999965 45666999999999887654
No 368
>PRK07046 aminotransferase; Validated
Probab=99.05 E-value=2.5e-07 Score=96.86 Aligned_cols=298 Identities=14% Similarity=0.068 Sum_probs=166.3
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHH
Q 048643 131 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQI 210 (506)
Q Consensus 131 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~ 210 (506)
++.|.++.+.++++++++ ...|+++||+|+..|+..||... | ++.+|-.....|-...-....
T Consensus 114 ~~~~~~lAe~l~~~~~~~---------~v~F~nSGtEA~e~AlrlAR~~T-------G-r~~ii~~~g~YHG~~d~~l~~ 176 (453)
T PRK07046 114 SEDAAWVGEELARRFGLP---------YWQVATTATDANRFVLRWARAVT-------G-RPKILVFNGCYHGTVDDVFVD 176 (453)
T ss_pred CHHHHHHHHHHHHHhCCC---------EEEEECCHHHHHHHHHHHHHHhh-------C-CCEEEEECCCCCCCcHHhHhh
Confidence 567777888999987542 56899999999999999999762 1 223344444455332111111
Q ss_pred h------------CCCC---CCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC----hhHH
Q 048643 211 V------------GIDL---KNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP----LKPL 271 (506)
Q Consensus 211 ~------------G~g~---~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp----l~~I 271 (506)
. |+.. ..+..+|. -|+++|++.+.. ....+|++.-.....|.+-| +++|
T Consensus 177 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~-------nd~~~l~~~l~~-----~~vAavi~EPi~g~~G~~~p~~~fl~~l 244 (453)
T PRK07046 177 LVDGRPVQRPGLLGQVHDLTATTRVVEF-------NDLAALEAALAD-----GDVAAVLAEPAMTNIGMVLPEPGFHEAL 244 (453)
T ss_pred ccCCCCCCCCCCCCCCccccCceEeeCC-------CCHHHHHHHhCC-----CCeEEEEECCCCCCCCCcCCCHHHHHHH
Confidence 0 1100 11222221 278999988842 12445666554445566644 8999
Q ss_pred HHHHHHhCCEEEeecccc---cccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCC-cccc
Q 048643 272 CDVAKQFGIWVHVDAAYA---GSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTN-PEYL 347 (506)
Q Consensus 272 ~~ia~~~g~~lhVDaA~g---g~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~-~~yl 347 (506)
.++|++||+.+++|+.+. |..- ... ..|+ ..|.+++ -|.++..+++|++..++.- .+.+... ....
T Consensus 245 r~lc~~~g~llI~DEV~tfr~g~Gg----~~~-~~gv-~PDi~t~--gK~lggG~Pi~av~g~~~i--~~~~~~~~~~~~ 314 (453)
T PRK07046 245 RELTRRYGTLLVIDETHTISSGPGG----YTR-AHGL-EPDFLVV--GKPIAGGVPCAVYGFSAEL--AERAQAAKASAP 314 (453)
T ss_pred HHHHHHhCCEEEEEccccCccCCcc----hhH-HhCC-Cccceee--hhhhcCCCcceeeeehHHH--HHHHhhccccCC
Confidence 999999999999999874 1111 111 1244 4788775 6988877889988876542 2233210 0000
Q ss_pred CCccccCCCccCCCCccccCCCCCCchHH---HHHHHHhchhHHHHHHHHHHHHHHHHHHHHHc----CCCCc-----c-
Q 048643 348 KNKATESKQVVDYKDWQITLSRRFRSLKL---WLVIRNYGVANLRHFLRSHVNMAKLFERLVAS----DKRVS-----P- 414 (506)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~sr~~~al~~---~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~----~~~~~-----p- 414 (506)
.. ......+-...++.. ..+|..+-.+ +..++..++.++|.+.|++ . ++. .
T Consensus 315 ~~------------~~~~~~T~~gnpl~~aa~~a~L~~l~~~---~~~~~~~~~g~~l~~~L~~l~~~~-~~~~~v~g~G 378 (453)
T PRK07046 315 PG------------HSGIGTTLSANALAMAAMRATLAEVMTE---AAYAHMLALAARLAAGLRAVIARH-GLPWHVTRVG 378 (453)
T ss_pred CC------------CceeCCCCcccHHHHHHHHHHHHHHhcc---cHHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEEeC
Confidence 00 001111112233333 3444444332 2455566666676666654 3 222 1
Q ss_pred ceEEEeecCCCcccccccccchHHH-----HHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHH
Q 048643 415 SAVMDKLKPKYENCHSQQLVTEEEA-----INEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWT 489 (506)
Q Consensus 415 ~~v~f~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~ 489 (506)
.++.+.+.+...+ +..+ -......+...+.++|.. +.+. + ..++++. ..+++||+++++
T Consensus 379 ~~~~i~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~Gv~-~~~~---~-~~~~~~p---~~t~~did~~~~ 442 (453)
T PRK07046 379 ARVEFQFAPTPPR--------NGAEAAAALDPELEAALHLYLLNRGVL-ITPF---H-NMMLVCP---ATTAADVDRLVA 442 (453)
T ss_pred cEEEEEEeCCCCC--------CHHHHhcccCHHHHHHHHHHHHHCCCE-Eecc---c-CcEEEeC---CCCHHHHHHHHH
Confidence 3344443221100 0000 023456777888888974 4331 1 3466654 368889999999
Q ss_pred HHHHHHHHHH
Q 048643 490 MVQEQLEAFL 499 (506)
Q Consensus 490 ~l~~~~~~l~ 499 (506)
++++..+++.
T Consensus 443 ~~~~~l~~~~ 452 (453)
T PRK07046 443 AFDACLGELL 452 (453)
T ss_pred HHHHHHHHHh
Confidence 9999987764
No 369
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.04 E-value=3e-07 Score=96.15 Aligned_cols=308 Identities=10% Similarity=0.025 Sum_probs=161.2
Q ss_pred HHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCC----CCeEEEeCCCCchHHHHHHH
Q 048643 134 ENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENI----SKLVVYGSDQTHCALQKAAQ 209 (506)
Q Consensus 134 E~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~----~~~~v~~s~~~H~s~~ka~~ 209 (506)
..++.+.|+++.+ |... ...+|+++||+||..|+..||.....+....|. +..+|......|-...-+..
T Consensus 94 ~~~la~~l~~~~~-p~~~-----~~v~f~~SGsEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als 167 (443)
T PRK08297 94 MARFVDTFARVLG-DPEL-----PHLFFVDGGALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLS 167 (443)
T ss_pred HHHHHHHHHhhcC-CCCC-----CEEEEeCchHHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhh
Confidence 3345556666653 2221 267999999999999999998763211000111 23345455556644333333
Q ss_pred HhCCCCC--------CeEEEecCC------CCC----c---ccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc---
Q 048643 210 IVGIDLK--------NFRAIKTTK------SSS----Y---GLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV--- 265 (506)
Q Consensus 210 ~~G~g~~--------~v~~v~~~~------~~~----~---~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i--- 265 (506)
..|.... ....+|... ..+ - .-+++.+++.+.+ .+..+.+|++.-.....|.+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~---~~~~iAavI~EPi~g~~G~~~pp 244 (443)
T PRK08297 168 LTNTDPRKTARFPKFDWPRIDNPKLRFPLPGEDLEEVEALEAEALAQARAAFER---HPHDIACFIAEPIQGEGGDNHFR 244 (443)
T ss_pred hcCCcccccccCCCCCccccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHHh---CCCcEEEEEEccccCCCCCcCCC
Confidence 3331000 000111110 000 0 0123455555543 23456667766544555666
Q ss_pred -cChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCch-hHH-hhhcC
Q 048643 266 -DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPS-ALV-SSLST 342 (506)
Q Consensus 266 -dpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~-~l~-~~~~~ 342 (506)
+.+++|.++|++||+++++|+++.|+.....-+.....++ ..|.+++ -|.+ | .|.++++++- ... ..+..
T Consensus 245 ~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~~--gK~l--~--~~a~l~~~~i~~~~~~~~~~ 317 (443)
T PRK08297 245 PEFFAAMRELCDEHDALLIFDEVQTGVGLTGTAWAYQQLGV-RPDIVAF--GKKT--Q--VCGIMAGRRVDEVEDNVFAV 317 (443)
T ss_pred HHHHHHHHHHHHHcCCEEEEechhhccCccchHHHHHhcCC-CCCEEEe--cccc--c--ccceecchHHHHhhhhhccC
Confidence 5599999999999999999999977533221111111234 5788875 5775 3 3444444321 110 01100
Q ss_pred CccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHc----CCCC--c--c
Q 048643 343 NPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVAS----DKRV--S--P 414 (506)
Q Consensus 343 ~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~----~~~~--~--p 414 (506)
..+. . .|+ .+.+........+|..+..+ +++++..++.++|.+.|++ .|.+ + .
T Consensus 318 -~~~~------------~--~T~-~gnpl~~aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~vrg 378 (443)
T PRK08297 318 -SSRI------------N--STW-GGNLVDMVRARRILEVIEED---GLVENAARQGEYLLARLEELAAEFPAVVSNVRG 378 (443)
T ss_pred -cccc------------C--CCC-CccHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHHCCCcceeeec
Confidence 0000 0 011 11111112233444444333 3556666777777777754 3322 2 1
Q ss_pred --ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHH
Q 048643 415 --SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQ 492 (506)
Q Consensus 415 --~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~ 492 (506)
.++.+.+.. ......+.+.+.++|.+. .+. +...+|++. ....+++||+++++.|+
T Consensus 379 ~G~~~~i~~~~-----------------~~~~~~~~~~l~~~Gvl~-~~~---~~~~lr~~P-~l~~t~~eid~~l~~l~ 436 (443)
T PRK08297 379 RGLMCAFDLPT-----------------TADRDEVIRRLWEEGVLV-LPC---GERSIRFRP-ALTVTTEEIDAAIDALR 436 (443)
T ss_pred cceEEEEEecC-----------------HHHHHHHHHHHHHCCEEE-ecC---CCCeEEEEC-CccCCHHHHHHHHHHHH
Confidence 444444432 123456778888888754 322 335789977 45678889999999999
Q ss_pred HHHHHH
Q 048643 493 EQLEAF 498 (506)
Q Consensus 493 ~~~~~l 498 (506)
++.+++
T Consensus 437 ~~l~~~ 442 (443)
T PRK08297 437 RALPEV 442 (443)
T ss_pred HHHHhh
Confidence 988764
No 370
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.02 E-value=2.6e-07 Score=94.02 Aligned_cols=316 Identities=13% Similarity=0.060 Sum_probs=169.3
Q ss_pred HHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCC--
Q 048643 137 VMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGID-- 214 (506)
Q Consensus 137 ~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g-- 214 (506)
+.+.|+++..-. +. ...+|++|||+|+-+||.+++..+..+ |... ++..|-.....|-+..-++.+.|..
T Consensus 92 LA~~L~~~aP~~-~l-----~~vFf~~sGSeAvEtAlKma~qY~~~~-G~p~-r~~~Isr~~gYHG~T~ga~Sv~g~~~~ 163 (449)
T COG0161 92 LAEKLAELAPEG-GL-----DHVFFTDSGSEAVETALKMALQYWRAR-GQPQ-RKKFISRRNGYHGDTLGAMSVGGPVAL 163 (449)
T ss_pred HHHHHHHhCCCC-Cc-----cEEEEeCCchHHHHHHHHHHHHHHHhc-CCCc-ceEEEEeccCcCcccchheeccCchhh
Confidence 346677766511 01 267999999999999999999876543 2211 2223333444565544444444421
Q ss_pred --------CCCeEEEecCC---CC-Ccc------cCHHHHHHHHHHHHhcC-CccEEEEEecc-CCCCCcccC----hhH
Q 048643 215 --------LKNFRAIKTTK---SS-SYG------LSPDSLLTQINLDVEAG-LVPLFLCATIG-TTAITAVDP----LKP 270 (506)
Q Consensus 215 --------~~~v~~v~~~~---~~-~~~------~d~~~L~~~i~~~~~~g-~~p~~Vv~t~g-tt~tG~idp----l~~ 270 (506)
...+..+|... .. ++. -..+.||+.|.+. | .....+++.-. ....|.+-| +++
T Consensus 164 ~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~~le~~i~~~---g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~ 240 (449)
T COG0161 164 RHAFYDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAADELEALILEH---GPETIAAFIVEPVVGGAGGMLVPPPGYLKR 240 (449)
T ss_pred hhhhccccccCceecCCCcccccCCCCCChHHHHHHHHHHHHHHHhc---CcccEEEEEecccccccCCcccCChHHHHH
Confidence 01233344321 00 011 2245566665542 3 33444444322 223566644 899
Q ss_pred HHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCC-CcceEEEEeCchhHHhhhcCC-ccccC
Q 048643 271 LCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSALVSSLSTN-PEYLK 348 (506)
Q Consensus 271 I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~-~~yl~ 348 (506)
|.+||++||+.|+.|+.-.|+-..-.-+...-.|+ .-|.+|+. |.|... .+.|.++++++- .+.+... ..-+.
T Consensus 241 vr~iC~ky~ILlI~DEV~tGFGRTG~~FA~e~~gi-~PDi~~~a--KGLT~GY~Pl~a~l~~~~I--~~~~~~~~~~~f~ 315 (449)
T COG0161 241 VREICDKYGILLIADEVATGFGRTGKMFACEHAGI-VPDILCLA--KGLTGGYLPLSAVLTSDRI--YEAFSDGDAGAFM 315 (449)
T ss_pred HHHHHHHcCcEEEeecceeCCCcCchhhhhhhcCC-CCCeeeec--ccccccchhhHhHhhhHHH--HHHHhcccCCeec
Confidence 99999999999999998777643322222112223 56777765 777532 235566666542 2344322 11111
Q ss_pred CccccCCCccCCCCccccCCCCCCchHHHHHH---HHhchhHHHHHHHHHHHHHHHHHHHHHc-CCC---Cc--c---ce
Q 048643 349 NKATESKQVVDYKDWQITLSRRFRSLKLWLVI---RNYGVANLRHFLRSHVNMAKLFERLVAS-DKR---VS--P---SA 416 (506)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l---~~~G~~g~~~~i~~~~~~a~~l~~~l~~-~~~---~~--p---~~ 416 (506)
+ ..+-...+++.-++| +.+-+++ ++++..++..+|.+.|++ +++ +- - .+
T Consensus 316 H----------------G~TYsghPlacAaAla~L~i~e~e~---l~~~~~~~~~~l~~~L~~~l~~~p~VgdVR~~Gli 376 (449)
T COG0161 316 H----------------GHTYSGNPLACAAALANLDILEEED---LLERVAEIGAYLQAGLQAALADHPLVGDVRGLGLI 376 (449)
T ss_pred c----------------CCccccCHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHhcccCCcEEEeeccceE
Confidence 1 111122344444444 4444444 455566788888888876 332 21 1 34
Q ss_pred EEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 048643 417 VMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLE 496 (506)
Q Consensus 417 v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~ 496 (506)
..+.+..+.- +. ..- -.....++.+...++|. ++-+. |. .+=++. -.-.|+++|+++++.+.+..+
T Consensus 377 ~~iElv~d~~------t~-~~f-~~~~~~~~~~~~~e~Gl-~iRp~---g~-~i~~~P-Pliit~~eid~l~~~l~~al~ 442 (449)
T COG0161 377 GAIELVADKA------TK-TPF-EARVGARVRAAALERGL-LIRPL---GD-VIYLMP-PLIITREEIDELVDALREALD 442 (449)
T ss_pred EEEEEecccc------cc-cch-hhhHHHHHHHHHHHCCe-EEeec---CC-EEEEcC-CccCCHHHHHHHHHHHHHHHH
Confidence 4444433210 00 000 13446677888888887 44443 22 333443 346788999999999999988
Q ss_pred HHHcc
Q 048643 497 AFLTT 501 (506)
Q Consensus 497 ~l~~~ 501 (506)
+....
T Consensus 443 ~~~~~ 447 (449)
T COG0161 443 ETLAD 447 (449)
T ss_pred HHHhc
Confidence 76554
No 371
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=98.99 E-value=1.6e-07 Score=98.06 Aligned_cols=295 Identities=11% Similarity=0.029 Sum_probs=152.8
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeC-CCCchHHHHH--
Q 048643 131 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGS-DQTHCALQKA-- 207 (506)
Q Consensus 131 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s-~~~H~s~~ka-- 207 (506)
...+.++.+.|++++... + ..+|+++||+|+..|+..||... ++..|+.. ...+.+....
T Consensus 87 ~~~~~~la~~l~~~~p~~-~-------~v~f~~sGseA~e~AlklAr~~t---------gr~~i~~~~~~~~h~~~~~~~ 149 (431)
T PRK06209 87 SAIELDAAESFLELIDGA-D-------MVKFCKNGSDATSAAVRLARAYT---------GRDLVARCADHPFFSTDDWFI 149 (431)
T ss_pred CHHHHHHHHHHHHhCCcc-c-------eEEEecCHHHHHHHHHHHHHHHh---------CCCeEEEeccCcccccccccc
Confidence 345556678888876321 1 57899999999999999999762 22233221 1111111110
Q ss_pred -HHH--hCCCCCCeE--EEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEE
Q 048643 208 -AQI--VGIDLKNFR--AIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWV 282 (506)
Q Consensus 208 -~~~--~G~g~~~v~--~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~l 282 (506)
... .|... .++ .+... .-|+++|++++++. +..+.+|++.......+..+.+++|.++|++||+.+
T Consensus 150 g~~~~~~~~~~-~~~~~~~~~~-----~~d~~~l~~~l~~~---~~~~aavi~Epv~g~~~~~~~l~~l~~lc~~~g~lL 220 (431)
T PRK06209 150 GTTPMSAGIPA-SVSALTVTFR-----YNDIASLEALFEDH---PGRIACVILEPATADEPQDGFLHEVRRLCHENGALF 220 (431)
T ss_pred ccCCCCCCCCh-hHhccccccC-----CCCHHHHHHHHHhC---CCCEEEEEEccccCCCCCHHHHHHHHHHHHHcCCEE
Confidence 000 01100 000 11111 23789999988642 123444555332222333445999999999999999
Q ss_pred EeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhh--hcC-C-c-cccCCccccCCCc
Q 048643 283 HVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSS--LST-N-P-EYLKNKATESKQV 357 (506)
Q Consensus 283 hVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~--~~~-~-~-~yl~~~~~~~~~~ 357 (506)
++|+++.|+... ...-....++ ..|.+++ -|.++..+..|+++.++. +.+. +.. . + .++.
T Consensus 221 I~DEv~tG~~~~-~~g~~~~~gv-~PDi~t~--gK~lggG~p~~av~~~~~--i~~~~~~~~~~~~~~~~~--------- 285 (431)
T PRK06209 221 ILDEMITGFRWH-MRGAQKLYGI-VPDLSCF--GKALGNGFAVSALAGKRE--YMELGGLEHTDRERVFLL--------- 285 (431)
T ss_pred EEEcccccCCcC-cchhhHHhCC-Ccceeee--hhhhcCCcccEEEEEHHH--HHhhhcccccCCCCceee---------
Confidence 999998665321 1000111233 4676554 698887667788877642 2222 100 0 0 0110
Q ss_pred cCCCCccccCC-CCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHc----CCCCc--------cceEEEeecCC
Q 048643 358 VDYKDWQITLS-RRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVAS----DKRVS--------PSAVMDKLKPK 424 (506)
Q Consensus 358 ~~~~~~~~~~s-r~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~----~~~~~--------p~~v~f~~~~~ 424 (506)
+...+ .+........+|+.+-.++ ++++..++.++|++.|++ .+ +. +..+.+.....
T Consensus 286 ------~~T~~~np~~~aaa~a~l~~i~~~~---~~~~~~~~g~~l~~~L~~~~~~~~-~~~~vr~~G~~~~~~~~~~~~ 355 (431)
T PRK06209 286 ------STTHGAETHALAAAIATMAIYRDED---VIERLHEQGAKLAAGVNEAAAEHG-LQDHVRVSGRPCCLTYSTLDG 355 (431)
T ss_pred ------ccCCCCCHHHHHHHHHHHHHHhccC---HHHHHHHHHHHHHHHHHHHHHhCC-CCeEEEeecceEEEEEecCCc
Confidence 00111 1112234455566664444 345555566666666644 32 21 11111111110
Q ss_pred CcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 048643 425 YENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAFL 499 (506)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l~ 499 (506)
..+........+.+++.+.|.. +. .++++ ...|++||++++++|+++.+++.
T Consensus 356 -----------~~~~~~~~~~~~~~~l~~~Gi~-~p--------~l~is---~~ht~~dId~~l~~l~~~l~~~~ 407 (431)
T PRK06209 356 -----------NGQPSQAFRTLFLQETIRRGVL-MP--------SLVVS---YAHGDADIERTIDAVHGALGVYR 407 (431)
T ss_pred -----------ccCCcHHHHHHHHHHHHHCCcc-cc--------ccccc---ccCCHHHHHHHHHHHHHHHHHHH
Confidence 0000123345677788888874 32 13333 34578899999999999888774
No 372
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.99 E-value=5.8e-08 Score=94.69 Aligned_cols=295 Identities=12% Similarity=0.076 Sum_probs=176.7
Q ss_pred HHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCe
Q 048643 139 DWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGIDLKNF 218 (506)
Q Consensus 139 ~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v 218 (506)
+.+++.+|.+++ ++.+-|-.++..++-+... .++++++.+..+..+.++.++.-- .+
T Consensus 146 ~~iakF~G~E~a---------ivYs~gF~ti~S~ipafsK-----------rGDIi~~de~~nfaIq~GlqlSRS---~i 202 (467)
T KOG1358|consen 146 KRIAKFMGTEDA---------IVYSYGFSTIESAIPAFSK-----------RGDIIFVDEAVNFAIQKGLQLSRS---TI 202 (467)
T ss_pred HHHHHhhCCcce---------eeeccccchhhhcchhhhc-----------cCcEEEEehhhhHHHHHHHhhhhh---ee
Confidence 558888998764 4444333333333333222 577889999999999999887655 66
Q ss_pred EEEecCCCCCcccCHHHHHHHHHHHH----hcCCc---cEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecccccc
Q 048643 219 RAIKTTKSSSYGLSPDSLLTQINLDV----EAGLV---PLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGS 291 (506)
Q Consensus 219 ~~v~~~~~~~~~~d~~~L~~~i~~~~----~~g~~---p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~ 291 (506)
++.. +.|+++||+.+.+.. ++.+. -.+||+..-.-++|.+-|+.+|.++..||...+++|..|..+
T Consensus 203 ~~Fk-------hndm~~lerll~E~~~~~~K~~k~~~~Rrfiv~EGl~~N~g~i~pl~~iv~lk~Kyk~RvildEs~SfG 275 (467)
T KOG1358|consen 203 SYFK-------HNDMEDLERLLPEQEDEDQKNPKKALTRRFIVVEGLYANTGDICPLPEIVKLKNKYKFRVILDESLSFG 275 (467)
T ss_pred EEec-------CCCHHHHHHhccCcchhhhhccccccceEEEEEEeeccCCCcccccHHHHHHHhhheEEEEEecccccc
Confidence 6665 457888887774332 22221 346777777889999999999999999999999999998665
Q ss_pred cccCcc---chhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchh-HHhhhcCCccccCCccccCCCccCCCCccccC
Q 048643 292 ACICPE---FQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSA-LVSSLSTNPEYLKNKATESKQVVDYKDWQITL 367 (506)
Q Consensus 292 ~~~~~~---~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~-l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~ 367 (506)
.+-.-. -.+.-..++..|.++.+.--.+. ..|.+.+.+... ..+.++ ...|.+.
T Consensus 276 ~lg~~GrGvteH~~v~~~~iDiv~~sm~~ala---s~GgFc~G~~~i~~hQrLS-g~~Y~fS------------------ 333 (467)
T KOG1358|consen 276 VLGKTGRGVTEHFGVPITDIDIVTASMETALA---SGGGFCAGKSFIADHQRLS-GSGYCFS------------------ 333 (467)
T ss_pred cccccCccccccCCCCccceeeeeeccccccc---ccCceeecceeeEeeeecc-ccceeee------------------
Confidence 543210 01112235678888877544333 233333322111 111121 1233332
Q ss_pred CCCCCc---hHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc----c--ceEEEeecCCCcccccccccchHH
Q 048643 368 SRRFRS---LKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS----P--SAVMDKLKPKYENCHSQQLVTEEE 438 (506)
Q Consensus 368 sr~~~a---l~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~----p--~~v~f~~~~~~~~~~~~~~~~~~~ 438 (506)
+..-+ -++..++... +.-.++++........+.+.+....+|+ | +++-.++.+.. .+.+
T Consensus 334 -AslPp~la~aa~~ai~i~--~~~p~~~~~L~~k~~~~H~~l~~~s~~~v~~~~~SPi~hl~l~~~~---------~s~e 401 (467)
T KOG1358|consen 334 -ASLPPYLAGAAIKAILIE--EWNPEIVQPLRAKVAKFHAALSSNSGFIVSGSPESPIIHLQLERSY---------GSRE 401 (467)
T ss_pred -ccCchhhhhhHHHHHHHH--hhCcchhhhhhccccccchhhhcCCceEEecCcCCceeeeeecccc---------cchH
Confidence 22111 2222333322 2333456666777788888888776676 4 55555655431 1222
Q ss_pred HHHHHHHHHHHHHHhcCcEEEeeeeEC------CEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 048643 439 AINEFNRELLESINASGKAYMTHAVCG------GIYAMRFAVGATLTEERHVMVAWTMVQEQLEAF 498 (506)
Q Consensus 439 ~~~~~~~~l~~~l~~~g~~~~~~~~~~------g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l 498 (506)
+--.+-+++.++...++.......... -+..+|+|+ +...++++|+++.+.|++.+..+
T Consensus 402 ~e~~lL~eivd~~i~~~~ll~~a~~~~~~e~~~~~pSiri~~-~a~~seeel~ra~~~ik~~~~~~ 466 (467)
T KOG1358|consen 402 KEEKLLEEIVDKCIAEGVLLTRAKYLEKLERCPIPPSIRICV-SAGMSEEELERAAELIKEVASAV 466 (467)
T ss_pred HHHHHHHHHHHHHHhhcceehhhhhhhhcccCCCCCcEEEEE-eCCCCHHHHHHHHHHHHHHHHhh
Confidence 223445666666666665433333221 245799999 56778889999999999998764
No 373
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=98.99 E-value=4.9e-07 Score=94.33 Aligned_cols=285 Identities=10% Similarity=-0.002 Sum_probs=146.5
Q ss_pred cEEEcCCchHHHHHHHHHHHHHHHHhhcccCC----CCeEEEeCCCCchHHHHHHHHhCCC-CC-C---e---EEEec--
Q 048643 158 GGVIQGTTCEAILCTLTAARDRVLNKIGRENI----SKLVVYGSDQTHCALQKAAQIVGID-LK-N---F---RAIKT-- 223 (506)
Q Consensus 158 ~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~----~~~~v~~s~~~H~s~~ka~~~~G~g-~~-~---v---~~v~~-- 223 (506)
..+|+++||+||..|+..||...-+.....|. ++.+|......|-...-+....|.. .. . . ..++.
T Consensus 105 ~v~f~~sGsEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~ 184 (431)
T TIGR03251 105 HLFFIEGGALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPK 184 (431)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCccCCCCc
Confidence 56899999999999999999753110000111 1335555555664444343333321 00 0 0 00111
Q ss_pred -----CCCC-C-----cccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc----cChhHHHHHHHHhCCEEEeeccc
Q 048643 224 -----TKSS-S-----YGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV----DPLKPLCDVAKQFGIWVHVDAAY 288 (506)
Q Consensus 224 -----~~~~-~-----~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i----dpl~~I~~ia~~~g~~lhVDaA~ 288 (506)
+... + ..-+++.+++.+.. .+..+.+|++.-.....|.+ +.+++|.++|++||+.+++|+++
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~---~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~ 261 (431)
T TIGR03251 185 LTFPLDAPNLDQVIALEEEALRQARAAFAE---RPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQ 261 (431)
T ss_pred ccCCccccccchhhHHHHHHHHHHHHHHHh---CCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecch
Confidence 0000 0 00123444445542 23456677776555556665 46999999999999999999999
Q ss_pred ccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCch-hHHh-hhcCCccccCCccccCCCccCCCCcccc
Q 048643 289 AGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPS-ALVS-SLSTNPEYLKNKATESKQVVDYKDWQIT 366 (506)
Q Consensus 289 gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~-~l~~-~~~~~~~yl~~~~~~~~~~~~~~~~~~~ 366 (506)
.|+.....-+.....++ ..|.+++. |.+ | .+|++ .+++- .... .+. .+... ..|.
T Consensus 262 tG~GrtG~~~a~~~~gv-~PDi~~~g--K~~--~-~~g~~-~~~~i~~~~~~~~~-~~~~~--------------~~T~- 318 (431)
T TIGR03251 262 TGVGLTGTAWAYQQLGV-QPDIVAFG--KKT--Q-VCGIM-AGRRVDEVADNVFA-VPSRL--------------NSTW- 318 (431)
T ss_pred hccCccchHHHHHhcCC-CCCEEEec--ccC--c-cceEE-ecchHHHhhhhccc-Ccccc--------------CCCC-
Confidence 87543211111112234 57888764 554 2 23444 44321 1110 110 00000 0011
Q ss_pred CCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHH----cCCCCc----c--ceEEEeecCCCcccccccccch
Q 048643 367 LSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVA----SDKRVS----P--SAVMDKLKPKYENCHSQQLVTE 436 (506)
Q Consensus 367 ~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~----~~~~~~----p--~~v~f~~~~~~~~~~~~~~~~~ 436 (506)
.+.+.......++|..+..+++ +++..++.++|.+.|+ +.+++. . .++.+.+.+.
T Consensus 319 ~gnpl~~aaa~a~L~~l~~~~l---~~~~~~~g~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i~~~~~------------ 383 (431)
T TIGR03251 319 GGNLVDMVRATRILEIIEEERL---VDNARVQGAHLLARLHELAAEFPHLVSNPRGRGLMCAFDLPST------------ 383 (431)
T ss_pred CCCHHHHHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHHHHHHhCccceecccccceeEEEEeCCH------------
Confidence 1111122333445555544443 3344445555555553 344232 1 4445555321
Q ss_pred HHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHH
Q 048643 437 EEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQE 493 (506)
Q Consensus 437 ~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~ 493 (506)
....++.+.+.++|.+. .+ .+...+|++. ....+++||++++++|++
T Consensus 384 -----~~~~~~~~~l~~~Gvl~-~~---~g~~~lr~~P-~l~~t~~eid~~l~~l~~ 430 (431)
T TIGR03251 384 -----ADRDEVIRQLYREGVLL-LG---CGERSIRFRP-PLTVTREEIDAAIDAIRR 430 (431)
T ss_pred -----HHHHHHHHHHHhCCeEE-ec---CCCCeEEEEC-CccCCHHHHHHHHHHHHh
Confidence 23456778888888753 32 2335689988 567888999999999876
No 374
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=98.84 E-value=2e-06 Score=84.34 Aligned_cols=288 Identities=12% Similarity=0.006 Sum_probs=158.0
Q ss_pred cEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCC-eEEEeCCCCchHHHHHHHHhCCCCCCe---------EEEec-CCC
Q 048643 158 GGVIQGTTCEAILCTLTAARDRVLNKIGRENISK-LVVYGSDQTHCALQKAAQIVGIDLKNF---------RAIKT-TKS 226 (506)
Q Consensus 158 ~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~-~~v~~s~~~H~s~~ka~~~~G~g~~~v---------~~v~~-~~~ 226 (506)
..+|+++|||||-+||++||... .. .+|-.....|-+..-++.+.|++..+. ...+. |+.
T Consensus 111 ~vfF~nsGsEANelal~mar~Yt---------~~~diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pdp~ 181 (442)
T KOG1404|consen 111 VVFFVNSGSEANELALKMARLYT---------GNLDIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPDPY 181 (442)
T ss_pred EEEEecCCchHHHHHHHHHHHhc---------CCceEEEeeccccCCchhhcccccCCcccccCCCCCCcccccCCCCcc
Confidence 67999999999999999999763 22 334345556655555555555532111 11110 000
Q ss_pred -CCccc-----CH----HHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC----hhHHHHHHHHhCCEEEeeccccccc
Q 048643 227 -SSYGL-----SP----DSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP----LKPLCDVAKQFGIWVHVDAAYAGSA 292 (506)
Q Consensus 227 -~~~~~-----d~----~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp----l~~I~~ia~~~g~~lhVDaA~gg~~ 292 (506)
+-+.= .. +.|+..|..+... .+...++..-....|.+.+ |++..++|+++|..++.|.++.|+.
T Consensus 182 r~~~~~~~~~e~~d~~a~~l~d~i~~~~~~--~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfG 259 (442)
T KOG1404|consen 182 RGIFGGSNEEEASDRYAKELEDLILYDGPE--TVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFG 259 (442)
T ss_pred cccCCCCchhhhHHHHHHHHHHHHHhcCCC--ceeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhccc
Confidence 00000 12 3444444443322 2344444443444588866 8999999999999999999998775
Q ss_pred ccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCccccCCCCCC
Q 048643 293 CICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFR 372 (506)
Q Consensus 293 ~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~ 372 (506)
....-+...-.++ .-|.+|+ -|.++...+.|.+++..+- ...+.....|...- .+.+..
T Consensus 260 RtG~~wgfe~h~v-~PDIvTm--AKgiGnG~Pl~AVvtt~EI--a~v~~~~~~~fnTy----------------ggnP~a 318 (442)
T KOG1404|consen 260 RTGHMWGFESHGV-VPDIVTM--AKGIGNGFPLGAVVTTPEI--ADVLNQKSSHFNTY----------------GGNPVA 318 (442)
T ss_pred cccccccccccCC-CccHHHH--HhhccCCCcceeeecCHHH--HHHHHhcccccccc----------------CCCchh
Confidence 5432111111122 3455554 4888877888888876542 23444333233221 121222
Q ss_pred chHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCC-Cc-------c-ceEEEeecCCCcccccccccchHHHHHHH
Q 048643 373 SLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKR-VS-------P-SAVMDKLKPKYENCHSQQLVTEEEAINEF 443 (506)
Q Consensus 373 al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~-~~-------p-~~v~f~~~~~~~~~~~~~~~~~~~~~~~~ 443 (506)
+...-+.|+.+-+ +++.++..+...||.+.|.++.+ ++ . -++-..+.......+++ . ...
T Consensus 319 ~avg~aVL~Vike---e~LqE~aa~vG~yl~~~l~~l~d~h~iIGdVRG~GLm~GvE~V~dk~~~~pp----~----~~~ 387 (442)
T KOG1404|consen 319 CAVGLAVLKVIKE---ENLQENAAEVGSYLLEKLAALKDKHPIIGDVRGRGLMLGVELVSDKSEPKPP----A----TAE 387 (442)
T ss_pred HHHHHHHHHHHHH---HhHHHHHHHHHHHHHHHHHHHhhcCCceeecccceeEEEEEEecccCCCCCc----c----hHH
Confidence 2223344555444 45567788899999999987522 22 1 12222222211111111 1 223
Q ss_pred HHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHH
Q 048643 444 NRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMV 491 (506)
Q Consensus 444 ~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l 491 (506)
...+-+.+.+.|. .++-..+.|. ++|++. ..-.|++||+.+++..
T Consensus 388 ~~~i~~~cke~Gv-lvg~g~i~G~-vfriaP-PlciT~edi~f~~~~~ 432 (442)
T KOG1404|consen 388 GAVIGEQCKELGV-LVGKGGIHGN-VFRIAP-PLCITKEDIDFAVEYF 432 (442)
T ss_pred HHHHHHHHHHhCe-eeecccccce-EEEecC-CeeccHHHHHHHHHHH
Confidence 4455566666686 4566667776 899987 4556888997777755
No 375
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=98.84 E-value=1.3e-06 Score=82.77 Aligned_cols=333 Identities=12% Similarity=0.113 Sum_probs=203.2
Q ss_pred HHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeC----CCCchHHHHHHH
Q 048643 134 ENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGS----DQTHCALQKAAQ 209 (506)
Q Consensus 134 E~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s----~~~H~s~~ka~~ 209 (506)
..-+...++.+.|..+. ...+.+ +-..|+..|+.. +++.. .++..|+.- ..-||.++.-++
T Consensus 113 De~il~l~~~iVGA~e~-------EvavmN-sLTvNlh~Ll~s---FyKPT----ekR~KILlE~kaFPSDhYAiesQ~~ 177 (465)
T KOG3846|consen 113 DEPILPLLAPIVGAQEN-------EVAVMN-SLTVNLHSLLIS---FYKPT----EKRFKILLEKKAFPSDHYAIESQCK 177 (465)
T ss_pred chhhhhhhhhhccCCch-------hhhhHh-hhhhHHHHHHHH---hcCCc----chhhhhhhccCCCCchHHHHHhhhh
Confidence 34456778888888764 222222 233555554432 22110 012223221 236999999999
Q ss_pred HhCCCC-CCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeeccc
Q 048643 210 IVGIDL-KNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAY 288 (506)
Q Consensus 210 ~~G~g~-~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~ 288 (506)
+-|+.. +.++.|...+. .-.+..+++-+.|+. +|....+|+++.....||..-++.+|...-+..|+++=-|-||
T Consensus 178 lhG~~~e~sm~~iePREG-EetlRteDILd~IEk---ngDeiA~v~fSGvqyYTGQ~Fdi~aIT~Agq~kgc~VGfDLAH 253 (465)
T KOG3846|consen 178 LHGISPENSMIQIEPREG-EETLRTEDILDTIEK---NGDEIALVCFSGVQYYTGQYFDIGAITFAGQFKGCLVGFDLAH 253 (465)
T ss_pred hcCCChHHheEEeccccc-ccchhHHHHHHHHHh---cCCeEEEEEeecceeecccccchhhhhhcccCCCcEechhhhh
Confidence 999953 45566665543 347888887777765 5667788999999999999999999997667779999999998
Q ss_pred ccccccCccchhhhcCCCCCCeeEEcCccccCC-CCcceEEEEeCchhHHhhhcCCccccCCccccCCC---c--cCCCC
Q 048643 289 AGSACICPEFQHFIDGVEGADSFSLNAHKWFFT-TLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQ---V--VDYKD 362 (506)
Q Consensus 289 gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~-p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~---~--~~~~~ 362 (506)
+.+-....-+.+ ++|..+|...|++++ +-|.|.+++..+..- .......+|..+....... . ...+-
T Consensus 254 AvgNVpL~LHdW------gVDFACWCSYKYlnaGaGgIgGlFvHekh~~-~~~prl~GWwgh~~s~RF~Mdnvl~lipGa 326 (465)
T KOG3846|consen 254 AVGNVPLQLHDW------GVDFACWCSYKYLNAGAGGIGGLFVHEKHTK-ESLPRLAGWWGHDPSKRFQMDNVLELIPGA 326 (465)
T ss_pred hhcCCceEEeec------CCceEEEeeecccccCCCccceeeeehhhhc-chhhHHhhhccCCcchhhhhccccccCccc
Confidence 766554433333 899999999999984 556777887655321 1122223333332111000 0 11111
Q ss_pred ccccCCCC--CCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc-c---ceEEEee-cCCCcccccccccc
Q 048643 363 WQITLSRR--FRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS-P---SAVMDKL-KPKYENCHSQQLVT 435 (506)
Q Consensus 363 ~~~~~sr~--~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~-p---~~v~f~~-~~~~~~~~~~~~~~ 435 (506)
.++..|.+ ....++..+|..+..-.+.++..+.+-++.|+...++...+.. | .-..|.+ .|..... ++-..
T Consensus 327 ~GfRiSNPpi~~v~al~~SLe~F~q~~~~~lRkrS~lLTgYleyL~k~~~g~~~~~rt~Kl~~~IiTP~~~~e--rGcQL 404 (465)
T KOG3846|consen 327 LGFRISNPPIIDVVALRSSLELFAQFNINELRKRSLLLTGYLEYLLKASKGYKHPLRTEKLFFTIITPTSTDE--RGCQL 404 (465)
T ss_pred cccccCCCcHhHHHHHHhhHHHHHHhhHHHHhhhhhhHHhHHHHHHHHhcccCchhhhcceeEEEeCCccccc--ccceE
Confidence 11112222 1224666777778777789999999999999999998775555 3 1112222 1211000 00000
Q ss_pred hHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 048643 436 EEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAFL 499 (506)
Q Consensus 436 ~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l~ 499 (506)
+ -..+.-+..+.+.|.++|.+. .-+..+.+|++......+-.||..++++|.+++..+.
T Consensus 405 s-l~Fssp~~~vfqeL~krGv~~----DkR~PNvIRvAPvpLYN~f~Dvy~f~n~L~e~~d~~e 463 (465)
T KOG3846|consen 405 S-LYFSSPTPKVFQELHKRGVIG----DKRRPNVIRVAPVPLYNTFSDVYIFVNALNEAMDKLE 463 (465)
T ss_pred E-EEeCCCchHHHHHHHHcCeec----cccCCCceEeecchhhccHHHHHHHHHHHHHHHHHhh
Confidence 0 000111456777888888742 1234578999998888898999999999999987664
No 376
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=98.76 E-value=1.5e-05 Score=88.47 Aligned_cols=229 Identities=11% Similarity=0.041 Sum_probs=124.9
Q ss_pred HHHHHHHHHHH--hcCCccEEEEEecc-CCCCCcccC----hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCC
Q 048643 234 DSLLTQINLDV--EAGLVPLFLCATIG-TTAITAVDP----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVE 306 (506)
Q Consensus 234 ~~L~~~i~~~~--~~g~~p~~Vv~t~g-tt~tG~idp----l~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~ 306 (506)
+.+++.|++.. ..+.....|++.-. ....|.+-| +++|.++|++||+.|+.|+.+.|+......+.....|+
T Consensus 567 ~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~~fa~e~~gv- 645 (817)
T PLN02974 567 SYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGVESAWELLGC- 645 (817)
T ss_pred HHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecccCCCcccchhhHHhcCC-
Confidence 45666665321 12334445555432 233466633 89999999999999999999988865443333323344
Q ss_pred CCCeeEEcCccccCCCC-cceEEEEeCchhHHhhhcCCc--cccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHh
Q 048643 307 GADSFSLNAHKWFFTTL-DCCCLWVKDPSALVSSLSTNP--EYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNY 383 (506)
Q Consensus 307 ~aDsi~~~~hK~l~~p~-~~g~~~~r~~~~l~~~~~~~~--~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~ 383 (506)
..|.+++. |.+...| +.|.+++++.- .+.|.... ..+.+. .|. .+.+........+|+.+
T Consensus 646 ~PDIi~~g--KgLtgG~~Plaa~l~~~~I--~~~f~~~~~~~~~~hg------------~Ty-~gnpl~cAaala~L~~~ 708 (817)
T PLN02974 646 KPDIACYA--KLLTGGLVPLAATLATEEV--FEAFRGPSKLDALLHG------------HSY-TAHPMGCAAAAKALQWY 708 (817)
T ss_pred CCCEEeec--ccccCCCCccEEEEEcHHH--HHhhccccccCCcccC------------CCC-CcCHHHHHHHHHHHHHH
Confidence 57888875 8887663 67888886542 23442110 001110 010 11112223334455555
Q ss_pred chh-HHHHHHHHHHHHHHHHHHHH----HcCCCCc-c----ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHH-
Q 048643 384 GVA-NLRHFLRSHVNMAKLFERLV----ASDKRVS-P----SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESIN- 452 (506)
Q Consensus 384 G~~-g~~~~i~~~~~~a~~l~~~l----~~~~~~~-p----~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~- 452 (506)
-.+ -+.++.++..++..++.+.+ .+.|.+. . .++.+.+..... ... .......++.+++.
T Consensus 709 ~~~~~~~~l~~~~~~l~~~l~~~l~~~l~~~p~V~~VRg~Gl~~~iel~~~~~--------~~~-~~~~~a~~v~~~~~~ 779 (817)
T PLN02974 709 KDPSTNPNLIPPGSRLRELWDEELVRAISSLPNVERVVSLGTVLALELDAEGS--------GSG-YSSLYARSVVRRLRR 779 (817)
T ss_pred HcccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEEeeeeEEEEEEecCCc--------ccc-cchHHHHHHHHHHHH
Confidence 443 23344555555555555544 4455443 1 444444433210 000 01234466777777
Q ss_pred hcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 048643 453 ASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQL 495 (506)
Q Consensus 453 ~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~ 495 (506)
+.|.+ +.+. | .++|+.. .+.+++++++++++.|.+..
T Consensus 780 ~~Gl~-~r~~---G-nvi~l~p-P~~i~~e~l~~~~~~l~~~~ 816 (817)
T PLN02974 780 EDGIY-ARPL---G-NVVYLMC-GPTTSPETCTRLLRKVYRRL 816 (817)
T ss_pred hCCEE-EEec---C-CEEEEeC-CCCCCHHHHHHHHHHHHHHh
Confidence 77864 3321 2 4688765 68899999999999988753
No 377
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.75 E-value=8.1e-06 Score=80.70 Aligned_cols=223 Identities=15% Similarity=0.044 Sum_probs=131.9
Q ss_pred cEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCC---C--CCcccC
Q 048643 158 GGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTK---S--SSYGLS 232 (506)
Q Consensus 158 ~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~---~--~~~~~d 232 (506)
..+|.++||+||.+||.+||.....+.... +-.+|..-...|--..-++...+. .-..+|.++ + .--.-|
T Consensus 118 rvff~nsGTeAne~ALK~Ark~~~~~~~~~--~t~~Iaf~nsyHG~tlgals~~~~---s~y~~~~~p~~p~v~~~~ynd 192 (433)
T KOG1401|consen 118 RVFFCNSGTEANETALKFARKFTGKKHPEK--KTKFIAFENSYHGRTLGALSVTGN---SKYGLPFDPIAPDVVTAEYND 192 (433)
T ss_pred EEEEecCCcHHHHHHHHHHHHhhcccCCcc--ceeEEEEecCcCCcchhHHHhhcc---cccCCCCCCCCCceeecccCC
Confidence 789999999999999999998654332111 112455555666433333333333 111122111 0 001347
Q ss_pred HHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc--cC--hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCC
Q 048643 233 PDSLLTQINLDVEAGLVPLFLCATIGTTAITAV--DP--LKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGA 308 (506)
Q Consensus 233 ~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i--dp--l~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~a 308 (506)
+.+|++.++... |. ...|++.-..-.-|.+ || +..|..+|+++|+.++-|..+.|+....+.+.+..-++ .-
T Consensus 193 ~t~l~k~~~~h~--~~-IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g~~~a~e~~~~-~P 268 (433)
T KOG1401|consen 193 STALEKLFESHK--GE-IAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGYGWAQEYFGV-TP 268 (433)
T ss_pred HHHHHHHHHhCC--Cc-eEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccchHHHHHHhCc-CC
Confidence 999999998764 22 3456665555455555 44 78999999999999999999988777666555544443 45
Q ss_pred CeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCccccCCCCCCchH---HHHHHHHhch
Q 048643 309 DSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLK---LWLVIRNYGV 385 (506)
Q Consensus 309 Dsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~---~~~~l~~~G~ 385 (506)
|..|+ -|.|+...+.|++.++++- ...++...+ +.+.. +-...++. ...+|..+..
T Consensus 269 DI~t~--aK~L~gGlPigA~~v~~kV--~~~i~~~~~-l~hg~----------------Tf~gnpLacsa~~~~l~~l~~ 327 (433)
T KOG1401|consen 269 DITTV--AKPLGGGLPIGATGVRDKV--AEMISPGDH-LYHGG----------------TFSGNPLACSAGIKVLDELKD 327 (433)
T ss_pred cceee--hhhccCCceeEEEeehHHH--HhhcCCCCc-cccCc----------------ccCCChhhhhHHHHHHHHHcC
Confidence 77665 4888777888999988753 234433322 22211 11112332 2344555544
Q ss_pred -hHHHHHHHHHHHHHHHHHHHHHcCC
Q 048643 386 -ANLRHFLRSHVNMAKLFERLVASDK 410 (506)
Q Consensus 386 -~g~~~~i~~~~~~a~~l~~~l~~~~ 410 (506)
+.+.++-.....+.+.+.+.+.+.+
T Consensus 328 ~e~~k~vs~~~k~L~~~l~e~~~~~~ 353 (433)
T KOG1401|consen 328 PETLKNVSKIGKELRKLLDEYLKKTP 353 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 3455555555666777777766654
No 378
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.73 E-value=4.1e-06 Score=80.27 Aligned_cols=291 Identities=12% Similarity=0.147 Sum_probs=166.2
Q ss_pred HHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHH-------HH
Q 048643 137 VMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKA-------AQ 209 (506)
Q Consensus 137 ~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka-------~~ 209 (506)
..+.+.+++|++. .+-+++|.||+-+|+..||.+.....+....+..++.+-..-|-...-+ -.
T Consensus 106 f~~~vt~lf~~~k---------vlpmnTGaEa~Eta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ais~s~d~ds 176 (427)
T KOG1402|consen 106 FAEYVTKLFGYDK---------VLPMNTGAEAVETACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAISLSTDPDS 176 (427)
T ss_pred HHHHHHHhcCcce---------eeecccchhHHHHHHHHHHHHHHhhccCCccceeEEEecccccCceeeeEEecCCcch
Confidence 3467889999874 3446677999999999999886654332211223333333333111110 11
Q ss_pred HhCCCC---CCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC----hhHHHHHHHHhCCEE
Q 048643 210 IVGIDL---KNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP----LKPLCDVAKQFGIWV 282 (506)
Q Consensus 210 ~~G~g~---~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp----l~~I~~ia~~~g~~l 282 (506)
+.|.|. ..+..||.+ |.++|+.++++.. ..-|+|=-..| ..|.+-| |+++.++|.+|++++
T Consensus 177 ~~~fgp~~P~~~~~v~Y~-------d~eale~~l~~~~---vaaFivEPIQG--EaGVvvP~~GYL~~vreLCtkynvl~ 244 (427)
T KOG1402|consen 177 WDGFGPFLPGVVDKVPYG-------DAEALEVALKSPN---VAAFIVEPIQG--EAGVVVPPPGYLKKVRELCTKYNVLL 244 (427)
T ss_pred hhccCCCCCCcceeeccC-------CHHHHHHHhcCCC---eeEEEeecccc--ccceEeCCchhHHHHHHHHHhhcEEE
Confidence 223332 125566643 7899999998631 12233333444 4677733 899999999999999
Q ss_pred Eeecccccccc----cCccchhhhcCCCCCCeeEEcCccccC-CCCcceEEEEeCchhHHhhhcCCccccCCccccCCCc
Q 048643 283 HVDAAYAGSAC----ICPEFQHFIDGVEGADSFSLNAHKWFF-TTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQV 357 (506)
Q Consensus 283 hVDaA~gg~~~----~~~~~~~~~~gi~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~ 357 (506)
++|..+.|... ++-++... +-|.+.+ .|.|. .-|+.+.+++.+.-.+ .+. |.- + +
T Consensus 245 I~DEvQTGl~RTGk~la~d~env-----~PDivil--gKalSGG~~Pvsavl~~~~im~--~~~--pge--H------g- 304 (427)
T KOG1402|consen 245 IADEVQTGLARTGKLLACDYENV-----RPDIVIL--GKALSGGVYPVSAVLADDDIML--NIK--PGE--H------G- 304 (427)
T ss_pred EehhhhhcccccCcEEEeehhhc-----CCCeEEE--eccccCCeeeeEEEEecHHHHh--ccC--CCc--c------c-
Confidence 99999877543 12223222 4566654 36664 4466777777654332 121 100 0 0
Q ss_pred cCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCC-C----c----c-ceEEEeecCCCcc
Q 048643 358 VDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKR-V----S----P-SAVMDKLKPKYEN 427 (506)
Q Consensus 358 ~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~-~----~----p-~~v~f~~~~~~~~ 427 (506)
-|. + -..|+.-.++..+..---+++.+++..+...|+++|.+++. | . - -++...+.+...
T Consensus 305 -----sTy-g---gNpLg~~vaiAalevi~eekL~era~~lG~~l~~~L~~l~~~~p~~v~~VRGrGl~~ai~i~~~~~- 374 (427)
T KOG1402|consen 305 -----STY-G---GNPLGCAVAIAALEVIVEEKLVERAAKLGEILRDQLNKLQKKFPHVVKEVRGRGLLNAIVINPSKT- 374 (427)
T ss_pred -----ccc-C---CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhheeeccceEEEEEeccccc-
Confidence 000 1 13455555555554445567888999999999999988743 3 1 1 222233333210
Q ss_pred cccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 048643 428 CHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQL 495 (506)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~ 495 (506)
+ ....-.++-.+...|. +.-++++ ..+|+.. -.-.+++|+++-+++|++..
T Consensus 375 --------~----~~~aw~~cl~lk~~g~--LAkptH~--~IiRfaP-PL~I~e~dl~eg~e~i~k~i 425 (427)
T KOG1402|consen 375 --------S----GQDAWDVCLALKENGL--LAKPTHG--NIIRFAP-PLVISEEDLREGIEAIEKTI 425 (427)
T ss_pred --------c----chhHHHHHHccccccc--ccCCCCC--CeEEecC-CcccCHHHHHHHHHHHHHHh
Confidence 0 0112234555666676 2222232 3899987 45568899999999998764
No 379
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=98.65 E-value=1e-05 Score=81.69 Aligned_cols=189 Identities=13% Similarity=0.039 Sum_probs=111.8
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHH
Q 048643 131 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQI 210 (506)
Q Consensus 131 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~ 210 (506)
+....++.++|.++++-... ..+++++||+|+-.||..||.....+ ...+ +..++......|-...-+..+
T Consensus 58 ~~~~~~la~~L~~~~p~~~~-------~v~f~~sGseAve~Alkla~~~~~~~-~~~~-r~~il~~~~~yHG~t~~~~s~ 128 (339)
T PF00202_consen 58 HPEAAELAEKLAELFPGGLD-------RVFFANSGSEAVEAALKLARQYHNKR-AYTG-RRKILAFEGSYHGRTLGALSL 128 (339)
T ss_dssp EHHHHHHHHHHHHHSSTTEE-------EEEEESSHHHHHHHHHHHHHHHHHHT-HHHT-TTEEEEETTTB-TSSHHHHHH
T ss_pred ccchhhhhhhhhhccccccc-------eeeeccCchHHHHHHHHHhhcccccc-cccC-CceEEEeeeeeeccCcccccc
Confidence 44455667888888833222 67899999999999999999321111 1111 334455555566433333332
Q ss_pred hC---------CCCCCeEEEecCCCCC---cccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC----hhHHHHH
Q 048643 211 VG---------IDLKNFRAIKTTKSSS---YGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP----LKPLCDV 274 (506)
Q Consensus 211 ~G---------~g~~~v~~v~~~~~~~---~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp----l~~I~~i 274 (506)
.+ -....+..+|...... ..-..+.+++.+.+... .....|++.-.....|.+-+ +++|.++
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~~iaavivEPi~g~~G~~~~~~~~l~~l~~l 206 (339)
T PF00202_consen 129 TGNPPYRKGFGPLYPGVVFVPFPDPAADEEEQACLNALEELIAALNA--DEIAAVIVEPIQGEGGMIPPPPEYLRELREL 206 (339)
T ss_dssp SSSTHHHTTTCSSSTTEEEEETTCHHHHHHHHHHHHHHHHHHHHHHG--GGEEEEEEESSBTTTTSBEE-TTHHHHHHHH
T ss_pred cCCccccccccccccccccccCCccchhhhHHHHHHHHHHHHHhhcC--CcEEEEEEeccccccCccccccchhhehccc
Confidence 21 1123567777652110 00112234444443322 22345666555555565532 7999999
Q ss_pred HHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCc
Q 048643 275 AKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDP 333 (506)
Q Consensus 275 a~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~ 333 (506)
|++||+.+++|..+.|+.....-+.....++ ..|.+++. |.+...++.|.++++++
T Consensus 207 c~~~gillI~DEV~tG~gRtG~~~a~~~~gv-~PDiv~~g--K~l~gG~p~sav~~~~~ 262 (339)
T PF00202_consen 207 CREHGILLIADEVQTGFGRTGKFFASEHYGV-DPDIVTFG--KGLGGGLPISAVLGSEE 262 (339)
T ss_dssp HHHTT-EEEEEETTTTTTTTSSSSGHHHHTS-SSSEEEEE--GGGGTTSSEEEEEEEHH
T ss_pred ccccccceecccccccccccCCccceecccc-cCcccccc--cchhhhhhcccccccch
Confidence 9999999999999988754443333333445 57999986 99987788999998864
No 380
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=98.63 E-value=2.4e-06 Score=85.18 Aligned_cols=150 Identities=19% Similarity=0.167 Sum_probs=102.9
Q ss_pred cEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEE----EeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCH
Q 048643 158 GGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVV----YGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSP 233 (506)
Q Consensus 158 ~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v----~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~ 233 (506)
.+.+++..+.|++..+.+.-+. +..++ .+. ..|+++...++..|. +++.|-.. .+-..
T Consensus 85 a~~ivnnn~aAVll~~~al~~~----------~EvVis~g~lV~-gg~~~v~d~~~~aG~---~l~EvG~t----n~t~~ 146 (395)
T COG1921 85 AAAIVNNNAAAVLLTLNALAEG----------KEVVVSRGELVE-GGAFRVPDIIRLAGA---KLVEVGTT----NRTHL 146 (395)
T ss_pred heeeECCcHHHHHHHHhhhccC----------CeEEEEcccccc-CCCCChhHHHHHcCC---EEEEeccc----CcCCH
Confidence 6788888777776555543321 12121 133 588999999999999 88777653 37899
Q ss_pred HHHHHHHHHHHhcCCccEEEEEeccCCCCCcc--cChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCee
Q 048643 234 DSLLTQINLDVEAGLVPLFLCATIGTTAITAV--DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSF 311 (506)
Q Consensus 234 ~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i--dpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi 311 (506)
.+++.+|.+.++ ++.-++.++. |.. -++++++++||++|++++||.+-|...-.-+..+..+. .++|-+
T Consensus 147 ~d~~~AIne~ta------~llkV~s~~~-~f~~~l~~~~l~~ia~~~~lpvivD~aSg~~v~~e~~l~~~la--~GaDLV 217 (395)
T COG1921 147 KDYELAINENTA------LLLKVHSSNY-GFTGMLSEEELVEIAHEKGLPVIVDLASGALVDKEPDLREALA--LGADLV 217 (395)
T ss_pred HHHHHHhccCCe------eEEEEeeccc-cccccccHHHHHHHHHHcCCCEEEecCCccccccccchhHHHh--cCCCEE
Confidence 999999998876 4444444433 333 46788999999999999999976554332233333333 289999
Q ss_pred EEcCccccCCCCcceEEEEeCchhH
Q 048643 312 SLNAHKWFFTTLDCCCLWVKDPSAL 336 (506)
Q Consensus 312 ~~~~hK~l~~p~~~g~~~~r~~~~l 336 (506)
+++++|.|+.|- +|++.-| +++.
T Consensus 218 ~~SgdKllgGPq-aGii~Gk-KelI 240 (395)
T COG1921 218 SFSGDKLLGGPQ-AGIIVGK-KELI 240 (395)
T ss_pred EEecchhcCCCc-cceEech-HHHH
Confidence 999999999996 5655444 4443
No 381
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=98.52 E-value=2.1e-05 Score=77.51 Aligned_cols=276 Identities=13% Similarity=0.084 Sum_probs=164.3
Q ss_pred cEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHH
Q 048643 158 GGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLL 237 (506)
Q Consensus 158 ~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~ 237 (506)
.++=|.|||-|+-.+-.-.... .++..|++|+++..-........|+ ++...|.-+..+..+|.+.+-
T Consensus 96 ~t~Qt~GGTGAL~~~A~fl~~~---------~~~~~vwis~PtW~NH~~If~~aGl---~v~~Y~Yyd~~~~~~df~~ml 163 (396)
T COG1448 96 ATVQTLGGTGALRVAADFLARF---------FPDATVWISDPTWPNHKAIFEAAGL---EVETYPYYDAETKGLDFDGML 163 (396)
T ss_pred hheecCCcchHHHHHHHHHHHh---------CCCceEEeCCCCcHhHHHHHHhcCC---ceeeeeccccccccccHHHHH
Confidence 4577788998876554332222 1666799999998877777778899 999888743334569999998
Q ss_pred HHHHHHHhcCCccEEEEEeccCCCCCcc---cChhHHHHHHHHhCCEEEeecccccccccCccc----hhhhcCCCCCCe
Q 048643 238 TQINLDVEAGLVPLFLCATIGTTAITAV---DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEF----QHFIDGVEGADS 310 (506)
Q Consensus 238 ~~i~~~~~~g~~p~~Vv~t~gtt~tG~i---dpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~----~~~~~gi~~aDs 310 (506)
+.|+...+. -+++.=.+++|+||.- +..++|+++.++.|+.-.+|-||-|+.--.++- |..+... .-=.
T Consensus 164 a~L~~a~~~---~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~GleeDa~~lR~~a~~~-~~~l 239 (396)
T COG1448 164 ADLKTAPEG---SVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADGLEEDAYALRLFAEVG-PELL 239 (396)
T ss_pred HHHHhCCCC---CEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccchHHHHHHHHHHHHhC-CcEE
Confidence 888875432 2233334578999964 458899999999999999999998876443322 1111111 1145
Q ss_pred eEEcCccccCCC---CcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHH------HH
Q 048643 311 FSLNAHKWFFTT---LDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLV------IR 381 (506)
Q Consensus 311 i~~~~hK~l~~p---~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~------l~ 381 (506)
++.++.|.++.= .||-.+...+.+...+.++.-..-++...+.+ +....++... |+
T Consensus 240 va~S~SKnfgLYgERVGa~~vva~~~~~a~~v~sqlk~~iR~~ySnP---------------P~~Ga~vva~IL~~p~Lr 304 (396)
T COG1448 240 VASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKAIIRTNYSNP---------------PAHGAAVVATILNNPELR 304 (396)
T ss_pred EEehhhhhhhhhhhccceeEEEeCCHHHHHHHHHHHHHHHHhccCCC---------------chhhHHHHHHHhCCHHHH
Confidence 677788988631 23333445565554444332222222111000 0011111111 22
Q ss_pred HhchhHHHHHHHHHHHHHHHHHHHHHcC-C--CCc--c---ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHh
Q 048643 382 NYGVANLRHFLRSHVNMAKLFERLVASD-K--RVS--P---SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINA 453 (506)
Q Consensus 382 ~~G~~g~~~~i~~~~~~a~~l~~~l~~~-~--~~~--p---~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 453 (506)
..=..-+..|..|..++++.|.+.|++. + .|. + ++++|. +- + .+-..+|.+
T Consensus 305 a~W~~El~~Mr~Ri~~mR~~lv~~L~~~~~~~~f~~i~~Q~GMFsy~--Gl-----------s--------~~QV~rLre 363 (396)
T COG1448 305 AEWEQELEEMRQRILEMRQALVDALKALGAPRNFDFIISQRGMFSYT--GL-----------S--------PEQVDRLRE 363 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchHhhcCceeecC--CC-----------C--------HHHHHHHHH
Confidence 2213446778889999999999999873 1 254 3 655553 32 1 112233333
Q ss_pred cCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHH
Q 048643 454 SGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQ 494 (506)
Q Consensus 454 ~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~ 494 (506)
+..+|+... | |+|+.. .++..|+.+.++|.++
T Consensus 364 e~~IY~v~s---G----Ri~vaG--l~~~ni~~va~ai~~v 395 (396)
T COG1448 364 EFGIYLVAS---G----RINVAG--LNTSNIDYVAKAIAAV 395 (396)
T ss_pred hccEEEecC---C----eeeecc--CChhhHHHHHHHHHhh
Confidence 333443322 2 899954 3555899999988764
No 382
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=98.46 E-value=1.8e-05 Score=73.54 Aligned_cols=242 Identities=11% Similarity=0.041 Sum_probs=136.3
Q ss_pred eEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHH
Q 048643 192 LVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPL 271 (506)
Q Consensus 192 ~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I 271 (506)
..|+....++....-.|.+-++ .|+.+|.++ +|.|+.+++.+.++.+.+ |.++.+|++.|++|++-..+.|
T Consensus 112 eKIl~cPPtysMY~v~A~iNd~---eVvkvpl~p--dF~lnvdai~evl~~ds~----iK~~F~tSPgNPtg~~ik~~di 182 (375)
T KOG0633|consen 112 EKILDCPPTYSMYVVDAAINDA---EVVKVPLNP--DFSLNVDAIAEVLELDSK----IKCIFLTSPGNPTGSIIKEDDI 182 (375)
T ss_pred cceeecCCcceeEEEEeecCCc---eEEEecCCC--CccccHHHHHHHHhcccc----ceEEEEcCCCCCCcccccHHHH
Confidence 3344333444322223446677 899999987 689999999999987643 6689999999999999777777
Q ss_pred HHHHHHh-CCEEEeecccccccc------cCccchhhhcCCCCCCeeEEcCccccC-CCCcceEEEEeCchhHHhhhcCC
Q 048643 272 CDVAKQF-GIWVHVDAAYAGSAC------ICPEFQHFIDGVEGADSFSLNAHKWFF-TTLDCCCLWVKDPSALVSSLSTN 343 (506)
Q Consensus 272 ~~ia~~~-g~~lhVDaA~gg~~~------~~~~~~~~~~gi~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~ 343 (506)
-+|.+-- |..++||.||--+.- +..+|..+ .+.-...|.++ +....|+-+.... ...-.....
T Consensus 183 ~KiLe~p~nglVVvDEAYidFsg~~S~~~lV~kYpNL--------ivlqTlSKsfGLAGiRvG~~~~~~~-ia~iln~~K 253 (375)
T KOG0633|consen 183 LKILEMPDNGLVVVDEAYIDFSGVESRMKLVKKYPNL--------IVLQTLSKSFGLAGIRVGYGAFPLS-IAEILNRAK 253 (375)
T ss_pred HHHHhCCCCcEEEEeeeeEeeccccccchHhHhCCce--------eehhhhhhhcCcceeEeecccccHH-HHHHHHhcc
Confidence 7777643 678899999843322 11222222 11222335444 2223333222211 111112333
Q ss_pred ccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhc---hhHHHHHHHHHHHHHHHHHHHHHcCCCCc--c----
Q 048643 344 PEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYG---VANLRHFLRSHVNMAKLFERLVASDKRVS--P---- 414 (506)
Q Consensus 344 ~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G---~~g~~~~i~~~~~~a~~l~~~l~~~~~~~--p---- 414 (506)
++|--.. ..--++|.++. -+.++...+...+-..+|...|.+.|.+. |
T Consensus 254 aPYNiS~-----------------------~~s~~AL~Als~~n~kkme~~rdaiv~er~RL~keLt~v~~~~~~~gg~d 310 (375)
T KOG0633|consen 254 APYNISV-----------------------AGSVAALAALSDSNGKKMEDVRDAIVRERERLFKELTEVPFLNDYPGGSD 310 (375)
T ss_pred CCccccc-----------------------hhHHHHHHhcCcccchHHHHHHHHHHHHHHHHHHHhhcCccccCCCCccc
Confidence 4442211 11123444442 23344445556666777888888887765 3
Q ss_pred -ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHH-hcCcEEEeeee-ECCEEEEEEEecCCCCCHHHHHHHHHHH
Q 048643 415 -SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESIN-ASGKAYMTHAV-CGGIYAMRFAVGATLTEERHVMVAWTMV 491 (506)
Q Consensus 415 -~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~-~~g~~~lR~~~~~~~tt~edi~~li~~l 491 (506)
+.+..++.+.+ +...+.++.++. +.|.+.--... ..-.+++|+++. |+|+-+-+++-+
T Consensus 311 aNFiLi~v~~~~---------------n~~akkly~q~at~~gVvVRfrgse~~c~G~lRitvG----t~EentvL~k~~ 371 (375)
T KOG0633|consen 311 ANFILIEVTGGD---------------NGMAKKLYKQDATKMGVVVRFRGSEEGCKGYLRITVG----TPEENTVLMKCL 371 (375)
T ss_pred ccEEEEEEcCCC---------------cHHHHHHHHHHHHhcceEEEEcCCccccceeEEEEcC----CcccchHHHHHH
Confidence 77777776532 344555555554 44553322222 223689999985 344556666666
Q ss_pred HH
Q 048643 492 QE 493 (506)
Q Consensus 492 ~~ 493 (506)
++
T Consensus 372 K~ 373 (375)
T KOG0633|consen 372 KQ 373 (375)
T ss_pred Hh
Confidence 54
No 383
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=98.44 E-value=2.8e-06 Score=78.97 Aligned_cols=233 Identities=12% Similarity=0.051 Sum_probs=145.5
Q ss_pred hhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCch-HHHHHHHHHHHHHHHHhhcccCCCC-eEEEeCCCCchHHHH
Q 048643 129 AATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTC-EAILCTLTAARDRVLNKIGRENISK-LVVYGSDQTHCALQK 206 (506)
Q Consensus 129 ~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt-~a~l~al~~ar~~~~~~~~~~~~~~-~~v~~s~~~H~s~~k 206 (506)
....+-.+.....-++.|+..-. +.++++-+| ++.-..+...|.+. |+ ..|+-...-.-|..|
T Consensus 54 ll~~isne~a~~~i~l~glhav~------nc~vvpl~tgmslslc~~s~r~kr---------pkakyiiw~ridqks~~k 118 (432)
T KOG3843|consen 54 LLACISNEFAKDAIHLAGLHAVA------NCFVVPLATGMSLSLCFLSLRHKR---------PKAKYIIWLRIDQKSCFK 118 (432)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhh------ceeEEeccccccHHHHHHHHhhcC---------CcccEEEEEecchHHHHH
Confidence 34455556666667777875432 334433222 44444555555431 22 234445566677778
Q ss_pred HHHHhCCCCCCeEEEe-cCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCC---cccChhHHHHHHHHhCCEE
Q 048643 207 AAQIVGIDLKNFRAIK-TTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAIT---AVDPLKPLCDVAKQFGIWV 282 (506)
Q Consensus 207 a~~~~G~g~~~v~~v~-~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG---~idpl~~I~~ia~~~g~~l 282 (506)
..-..|+ +.+.|. +-+.+....|++++++.|++.- +-++.+.+.||..- .-|.+++|+.||..|+++-
T Consensus 119 si~~agf---epiiie~i~d~d~l~tdleav~~~iee~g-----~dcilci~sttscfapr~pd~leaiaaica~~diph 190 (432)
T KOG3843|consen 119 SIIHAGF---EPIIIENILDGDELITDLEAVEAIIEELG-----EDCILCIHSTTSCFAPRSPDNLEAIAAICAAHDIPH 190 (432)
T ss_pred HHHhcCC---CceeeeccccchHHHHhHHHHHHHHHHhC-----CceEEEEeecccccCCCCCchHHHHHHHHHccCchh
Confidence 8777888 655554 3333346789999999998753 23455555555543 3388999999999999999
Q ss_pred EeecccccccccCccchhh---hcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccC
Q 048643 283 HVDAAYAGSACICPEFQHF---IDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVD 359 (506)
Q Consensus 283 hVDaA~gg~~~~~~~~~~~---~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 359 (506)
+|..|||.-.- +--++ .....++|.++.+.-|.+.+|.|.+++..-+...++ .+. ..|-...
T Consensus 191 ivnnayglqse---e~i~~iaa~~~~grida~vqsldknf~vpvggaiia~fk~n~iq-~ia--k~ypgra--------- 255 (432)
T KOG3843|consen 191 IVNNAYGLQSE---ECIHKIAAAAECGRIDAFVQSLDKNFMVPVGGAIIAAFKDNFIQ-EIA--KMYPGRA--------- 255 (432)
T ss_pred hhccccccchH---HHHHHHHHHhhhccHHHHHHHhhhcceeecchhHhhHhHHHHHH-HHH--HhCCCcc---------
Confidence 99999975321 11111 112458999999999999999887665432222211 111 1122111
Q ss_pred CCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHc
Q 048643 360 YKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVAS 408 (506)
Q Consensus 360 ~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~ 408 (506)
....++.+..+|..+|..+|.+...+..++--+++..|.+
T Consensus 256 ---------sa~ps~dllitll~~gqn~f~e~~~eqkemf~~l~~ki~~ 295 (432)
T KOG3843|consen 256 ---------SASPSLDLLITLLSLGQNAFKELFGEQKEMFLKLRNKIIK 295 (432)
T ss_pred ---------ccCccHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 0113467788899999999999998888888888777754
No 384
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=98.41 E-value=3.1e-05 Score=76.51 Aligned_cols=297 Identities=14% Similarity=0.122 Sum_probs=153.2
Q ss_pred HHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhh----cccCCCCeEEEeCCCCchHHHHHHHHhC
Q 048643 137 VMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKI----GRENISKLVVYGSDQTHCALQKAAQIVG 212 (506)
Q Consensus 137 ~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~----~~~~~~~~~v~~s~~~H~s~~ka~~~~G 212 (506)
+.+.+++++|.+.+ . ++.+|.|.-|++--..++....... -|...++...+|+...+-.....++.+|
T Consensus 74 ~r~l~a~llgv~~~-------~-viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRHFai~E~~G 145 (425)
T PF12897_consen 74 ARELFAELLGVPPE-------N-VIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDRHFAITEHFG 145 (425)
T ss_dssp HHHHHHHHHTS-GG-------G-EEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HHHHHHHHHCT
T ss_pred HHHHHHHHhCCCHH-------H-EEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchHHHHHHHhhC
Confidence 45789999999986 4 4445444445444344444333221 1333467889999999988999999999
Q ss_pred CCCCCeEEEecCCCCCcccCHHHHHHHHHHHHh-cCCccEEEEEeccCCCCCcccChhHHHHHH----HHhCCEEEeecc
Q 048643 213 IDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVE-AGLVPLFLCATIGTTAITAVDPLKPLCDVA----KQFGIWVHVDAA 287 (506)
Q Consensus 213 ~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~-~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia----~~~g~~lhVDaA 287 (506)
+ +++.||.+++ ..|++.+|+.+.+|.. +| +-++---+|++|.+-.=+-+.++| ...++.+..|-|
T Consensus 146 i---emi~VpM~~d---GPDmD~Ve~LV~~D~svKG----iWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDNA 215 (425)
T PF12897_consen 146 I---EMIPVPMTED---GPDMDMVEELVAEDPSVKG----IWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDNA 215 (425)
T ss_dssp ----EEEEEEEETT---EE-HHHHHHHTHTSTTEEE----EEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-T
T ss_pred c---EEEecCCCCC---CCCHHHHHHHHhcCCccce----EEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeecC
Confidence 9 9999999864 5899999999976643 23 556666789999995544444444 356899999999
Q ss_pred cccccccCccch----hhhc---CCCCCC--eeEEcCccccCCCCcceEEEEeCch--hHHhhhcCCccccCCccccCCC
Q 048643 288 YAGSACICPEFQ----HFID---GVEGAD--SFSLNAHKWFFTTLDCCCLWVKDPS--ALVSSLSTNPEYLKNKATESKQ 356 (506)
Q Consensus 288 ~gg~~~~~~~~~----~~~~---gi~~aD--si~~~~hK~l~~p~~~g~~~~r~~~--~l~~~~~~~~~yl~~~~~~~~~ 356 (506)
|+...+..+..+ ..+. ....-| .+-.+..|.-+...|.+++...... ++...+.. .-+..
T Consensus 216 Y~vHhL~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKITf~GaGva~~aaS~~Nl~~~~~~~~~--~tIgp------- 286 (425)
T PF12897_consen 216 YAVHHLYDEEPRDALLNILDACAKAGNPDRVYVFASTSKITFPGAGVAFFAASEANLAWIKKHLSV--QTIGP------- 286 (425)
T ss_dssp TTT-BSSSSSS------HHHHHHHTT-TTSEEEEEESTTTS-TTSS-EEEEE-HHHHHHHHHHHHH--H-S---------
T ss_pred ceEeeccccccchhhhHHHHHHHHcCCCCeEEEEecccccccCCcceeeeecCHHHHHHHHHHhcC--ceeCc-------
Confidence 988776332111 1111 111233 3455677888877777776654321 22211110 01110
Q ss_pred ccCCCCccccCCCCCCchHHHHHHHHhc-hh-HHHHHHHHHHHH--------HHHHHHHHH-cC--CCCc-c---ceEEE
Q 048643 357 VVDYKDWQITLSRRFRSLKLWLVIRNYG-VA-NLRHFLRSHVNM--------AKLFERLVA-SD--KRVS-P---SAVMD 419 (506)
Q Consensus 357 ~~~~~~~~~~~sr~~~al~~~~~l~~~G-~~-g~~~~i~~~~~~--------a~~l~~~l~-~~--~~~~-p---~~v~f 419 (506)
.-+.-....+.++ .+ |++++++++.++ -+.|.+.|. .. -.|. | -.|+|
T Consensus 287 ---------------dKvNQLRHvrff~d~~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~ia~Wt~P~GGYFIsl 351 (425)
T PF12897_consen 287 ---------------DKVNQLRHVRFFKDAEGGVRAHMRKHAAILRPKFEAVLEILEEELGDGLGIASWTKPKGGYFISL 351 (425)
T ss_dssp ----------------HHHHHHHHHHHHSHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGGTSEEE---SBSS-EEE
T ss_pred ---------------cHHHHHHHHHHhcChhhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCCCeeEecCCCCceEEEE
Confidence 1111112233332 35 777776666553 334555555 22 1233 6 56777
Q ss_pred eecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeee--eE-----CCEEEEEEEecCCCCCHHHHHHHHHHHH
Q 048643 420 KLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHA--VC-----GGIYAMRFAVGATLTEERHVMVAWTMVQ 492 (506)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~--~~-----~g~~~lR~~~~~~~tt~edi~~li~~l~ 492 (506)
...+. ..+++.+...+.|+.. ++. ++ .....||++.+-| +.+|++..++.+.
T Consensus 352 d~~~G------------------~AkrvV~lakeAGV~L-T~AGAtfPyg~DP~D~nIRiAPS~P--~leel~~Am~~~~ 410 (425)
T PF12897_consen 352 DVLDG------------------TAKRVVELAKEAGVAL-TPAGATFPYGKDPRDSNIRIAPSYP--SLEELETAMDVFA 410 (425)
T ss_dssp EESTT-------------------HHHHHHHHHHTTEE----TTTTSGGG--TTS-EEEE--SSS---HHHHHHHHHHHH
T ss_pred ecCCC------------------hHHHHHHHHHHhCcee-CCCCCCCCCCCCCCCCcEEecCCCC--CHHHHHHHHHHHH
Confidence 76554 2466777777778754 331 11 1246799998654 7779999999887
Q ss_pred HHHH
Q 048643 493 EQLE 496 (506)
Q Consensus 493 ~~~~ 496 (506)
-+++
T Consensus 411 ~cv~ 414 (425)
T PF12897_consen 411 TCVK 414 (425)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6654
No 385
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=98.33 E-value=9.6e-05 Score=71.93 Aligned_cols=188 Identities=19% Similarity=0.203 Sum_probs=112.8
Q ss_pred ccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHH-HHHHHHhhcccCCCCeEEEeCCCCc
Q 048643 123 NWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAA-RDRVLNKIGRENISKLVVYGSDQTH 201 (506)
Q Consensus 123 ~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~a-r~~~~~~~~~~~~~~~~v~~s~~~H 201 (506)
.|..|...-.|... +.+.+|+... --.-++-|.+.++..+..- ++. .++.+..+....|
T Consensus 74 AYagsrs~~~L~~a----vkdifGfq~~-------iPthQGRgAE~Il~~i~ik~~~~---------~pg~~~~~~sN~~ 133 (471)
T COG3033 74 AYAGSRSYYALADA----VKDIFGFQYT-------IPTHQGRGAENILIPILIKKGEQ---------EPGSKMVAFSNYH 133 (471)
T ss_pred hhcccccHHHHHHH----HHHhcCceee-------eeccCCccHHHHHHHHHhhhccc---------cCCccccccccce
Confidence 45566666666655 4556676432 1122333556666544321 110 1333334445677
Q ss_pred hHHHHHH-HHhCCCCCCeEEEecCCCC--------CcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCC---cccChh
Q 048643 202 CALQKAA-QIVGIDLKNFRAIKTTKSS--------SYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAIT---AVDPLK 269 (506)
Q Consensus 202 ~s~~ka~-~~~G~g~~~v~~v~~~~~~--------~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG---~idpl~ 269 (506)
+-.-++- ...|. .++-+++++.. .|.+|++.|++.|++.-.+ ..|.++.....++..| +++.++
T Consensus 134 FdTTr~h~~~ng~---~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~-nvp~I~~tiT~NsagGQpVSm~n~r 209 (471)
T COG3033 134 FDTTRGHIQINGA---TPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGAD-NVPYIVLTITNNSAGGQPVSMANMK 209 (471)
T ss_pred ecchhHHHHhcCC---ccccccccccccccccCCCCCccCHHHHHHHHHHhCcc-cCcEEEEEEeccccCCCcchHHhHH
Confidence 7555543 34455 44444443211 3679999999999886432 3565544444555555 347899
Q ss_pred HHHHHHHHhCCEEEeeccccc-ccccC----ccchhh-hc-----CCCCCCeeEEcCccccCCCCcceEEEEeCchh
Q 048643 270 PLCDVAKQFGIWVHVDAAYAG-SACIC----PEFQHF-ID-----GVEGADSFSLNAHKWFFTTLDCCCLWVKDPSA 335 (506)
Q Consensus 270 ~I~~ia~~~g~~lhVDaA~gg-~~~~~----~~~~~~-~~-----gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~ 335 (506)
++.+||++|++.+..|+|--. .+.+. +.|++. +. -++.||-+++++-|=..++.| |++.++|+..
T Consensus 210 ~v~~ia~ky~ipvv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~sYaD~~~mS~KKD~lvnmG-Gfl~~~D~~~ 285 (471)
T COG3033 210 AVYEIAKKYDIPVVMDAARFAENAYFIKQREPGYRDWSIEEIAREMYSYADGCTMSAKKDGLVNMG-GFLCFKDDSF 285 (471)
T ss_pred HHHHHHHHcCCcEEeehhhhhhhhhhhhhcCcccccccHHHHHHHHHhhhhhheeeccccceeccc-cEEEecCccH
Confidence 999999999999999997532 23333 223221 11 135899999999999988874 7888898853
No 386
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=98.30 E-value=0.00015 Score=75.33 Aligned_cols=362 Identities=13% Similarity=0.091 Sum_probs=190.0
Q ss_pred ChhHHhhhCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCccccCCCCCCHHHHHHHHHHhh-c----CCCCcccccC
Q 048643 53 EPGYLRKRLPECAPYNPESMETILQDVQEHIVPGVTHWQSPNYFAYFPSSGSIAGFLGEMLSSG-F----NVVGFNWISS 127 (506)
Q Consensus 53 ~p~~l~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~-~----n~~~~~~~~~ 127 (506)
.|..++.+.+..+|. |..+.++++++.+...++- -|.+=-=+||.. ...++.++..++.+- | .+++....++
T Consensus 84 VP~~Ir~~~~l~~~~-~~~E~eml~~l~~ia~kNk-~~ksfIGmGYyn-~~vP~~I~RNilenp~W~TqYTPYQ~EIsQG 160 (1001)
T KOG2040|consen 84 VPKSIRLKRPLKMDK-PLCESEMLQHLEDIASKNK-IWKSFIGMGYYN-THVPAVILRNILENPGWYTQYTPYQAEISQG 160 (1001)
T ss_pred cchhhcccchhcCCC-CcCHHHHHHHHHHHHhhhh-HHHHhhcccccc-ccCcHHHHHHhhhCCcceeccCCCchhhhhh
Confidence 355566666666644 7789999999998665553 343311234543 234455555554431 1 1222223344
Q ss_pred hhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHH
Q 048643 128 PAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKA 207 (506)
Q Consensus 128 p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka 207 (506)
..-+.+-.+ .+++++.|+|-+ +..+..-||.|--...++.|.. ++...+++...|+.....
T Consensus 161 RLEsllNyQ--Tmi~dlTGL~~a-------NASLLDEgTAaaEAm~l~~~~~----------krkk~vvd~~~hpqtlsV 221 (1001)
T KOG2040|consen 161 RLESLLNYQ--TMITDLTGLPMA-------NASLLDEGTAAAEAMALCNRIN----------KRKKFVVDSNCHPQTLSV 221 (1001)
T ss_pred hHHHHhhhH--HhhhhccCCccc-------chhhhccchhHHHHHHHHHhhc----------ccceEEecCCCCcchhhh
Confidence 445555555 788999999976 4555555665543333333432 333477888999865555
Q ss_pred HHH--hCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEee
Q 048643 208 AQI--VGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVD 285 (506)
Q Consensus 208 ~~~--~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVD 285 (506)
++. -++|. ++... |++. +-.. ......|.+..+.| .|.|.|.+++++.+++.|..+++-
T Consensus 222 ~~TRa~~~~i-~v~~~----------~~~~---~~~s----~~~v~gvlvQYP~t-~G~i~d~~el~~~a~~~~s~vv~a 282 (1001)
T KOG2040|consen 222 VKTRAKGFGI-KVVVS----------DIKE---ADYS----SKDVSGVLVQYPDT-EGSVLDFDELVELAHANGSLVVMA 282 (1001)
T ss_pred hhccccccce-eEEec----------CHHH---hhcc----ccceeEEEEEcCCC-CCcccCHHHHHHHhhccCceEEEe
Confidence 432 23311 22222 2211 1111 11133566666655 599999999999999999876542
Q ss_pred cccccccccCccchhhhcCCCCCCeeEEcCccccCCCCc-----ceEEEEeCchhHHhhhcCCccccCCccccCCCccCC
Q 048643 286 AAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLD-----CCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDY 360 (506)
Q Consensus 286 aA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~-----~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~ 360 (506)
--.-..-++-|. .+. +||....+.+.+ ++|.| .|++.|++. +. ...|+-+-+-..+..+...+
T Consensus 283 tDLLaLtiLrpP-gef-----GaDIavGSsQRF-GVPlGYGGPHAaFfAv~~~--l~---R~mPGRiiGvtkD~~gk~a~ 350 (1001)
T KOG2040|consen 283 TDLLALTILRPP-GEF-----GADIAVGSSQRF-GVPLGYGGPHAAFFAVSES--LV---RMMPGRIIGVTKDALGKEAY 350 (1001)
T ss_pred ehhhHHHccCCh-hhc-----Cceeeecccccc-CccccCCCchHHHHHHHHH--HH---hhCCCceEeeeecccccHHH
Confidence 211111112121 121 899999888875 45654 344444321 11 22233332211111111100
Q ss_pred C--C-ccccCCCCCC-------chHHHHHH-----HHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc----c--ceEEE
Q 048643 361 K--D-WQITLSRRFR-------SLKLWLVI-----RNYGVANLRHFLRSHVNMAKLFERLVASDKRVS----P--SAVMD 419 (506)
Q Consensus 361 ~--~-~~~~~sr~~~-------al~~~~~l-----~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~----p--~~v~f 419 (506)
. - ..-|..||-. |-++.+-+ -++|.+|++++.++....+-+|...|+.. +-+ + ..+..
T Consensus 351 RLALQTREQHIrRDKATSNICTAQALLANmaAmyaiYHGp~gL~~IArrvh~~T~~l~~~l~~a-ghel~~k~fFDTLkI 429 (1001)
T KOG2040|consen 351 RLALQTREQHIRRDKATSNICTAQALLANMAAMYAIYHGPHGLKEIARRVHNLTLILAEGLKNA-GHELQHKPFFDTLKI 429 (1001)
T ss_pred HHHHHHHHHHhhhhccchhhhHHHHHHHHHHHHHhhhcCcHHHHHHHHHHHHHHHHHHHHHhhc-chhhccccccceEEE
Confidence 0 0 0001223311 11222222 23599999999999999999999999875 343 3 55555
Q ss_pred eecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHH
Q 048643 420 KLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQ 492 (506)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~ 492 (506)
++... .+++.++-.++++-+- +-..+.+-+++ ...++++|++.++..+.
T Consensus 430 ~~~~s-------------------~~~~l~rA~~~~iNlr----~~ed~tigvsl-DETv~~~DvddLl~vf~ 478 (1001)
T KOG2040|consen 430 RCGCS-------------------AEEVLDRAAKRQINLR----LVEDGTIGVSL-DETVTEKDVDDLLWVFN 478 (1001)
T ss_pred EecCc-------------------HHHHHHHHHhhcCceE----EeecCceEEee-cccccHHHHHHHHHHHc
Confidence 65432 2334444444443211 11123455666 46678899999998876
No 387
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=98.13 E-value=0.00086 Score=66.08 Aligned_cols=168 Identities=11% Similarity=0.087 Sum_probs=97.9
Q ss_pred HHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCCCC--
Q 048643 139 DWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGIDLK-- 216 (506)
Q Consensus 139 ~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~-- 216 (506)
+-+|+.||.+..-. ..-| .+||.|+-++|...... .+..++++...+-.+.+...+.|-+..
T Consensus 61 ~iyA~vfgaE~ALV-----Rpq~-vSGTHAi~~~Lfg~Lrp----------GD~ll~~tG~PYDTL~~VIG~~g~~~GSL 124 (403)
T PF06838_consen 61 RIYADVFGAEDALV-----RPQF-VSGTHAIALALFGVLRP----------GDELLSITGKPYDTLEEVIGIRGNGPGSL 124 (403)
T ss_dssp HHHHHHCT-SEEEE-----ETTS--SHHHHHHHHHHHH--T----------T-EEEESSSS--CCHHHHHTSSSSSSSST
T ss_pred HHHHHHhCchhhhh-----cccc-cchHHHHHHHHHhcCCC----------CCeEEEcCCCchhhHHHHhCCCCCCCCCh
Confidence 45799999875420 1112 35788888777765442 344555676667678777644332111
Q ss_pred -----CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEe--ccCC--CCCcccChhHHHHHHHHh--CCEEEee
Q 048643 217 -----NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCAT--IGTT--AITAVDPLKPLCDVAKQF--GIWVHVD 285 (506)
Q Consensus 217 -----~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t--~gtt--~tG~idpl~~I~~ia~~~--g~~lhVD 285 (506)
+...||..+ ++.+|.+.++++|++.++ +|... -|.+ +.=.+++|+++++++|+. ++++.||
T Consensus 125 ~e~Gi~Y~~v~L~~--dg~~D~~~i~~~~~~~tk------~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVD 196 (403)
T PF06838_consen 125 KEFGIKYREVPLTE--DGTIDWEAIKKALKPNTK------MVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVD 196 (403)
T ss_dssp GGGT-EEEE--B-T--TSSB-HHHHHHHHHTTEE------EEEEE-S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE
T ss_pred HHhCceeEEEeecC--CCCcCHHHHHHhhccCce------EEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEe
Confidence 567888875 569999999999997654 44443 2322 233557888888888876 6899999
Q ss_pred cccccccccCccchhhhcCCCCCCeeEEcCccccCCC-CcceEEEEeCchhH
Q 048643 286 AAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSAL 336 (506)
Q Consensus 286 aA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l 336 (506)
-|||=+.-.. +.-+. +||-+..+.-|..+.. ..+|..++-+++..
T Consensus 197 NCYGEFvE~~-EP~~v-----GADl~aGSLIKNpGGgiAptGGYIaGr~~lV 242 (403)
T PF06838_consen 197 NCYGEFVETQ-EPTEV-----GADLMAGSLIKNPGGGIAPTGGYIAGRKDLV 242 (403)
T ss_dssp -TTTTTTSSS--GGGG-----T-SEEEEETTSGGGTTT-SS-EEEEESHHHH
T ss_pred CCcceecccc-Ccccc-----chhheeccceeCCCCCccCcCCEEechHHHH
Confidence 9997664322 22222 8999999999998743 44666666655544
No 388
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=98.12 E-value=2.2e-06 Score=84.79 Aligned_cols=160 Identities=18% Similarity=0.156 Sum_probs=37.0
Q ss_pred HHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCC------CchHHHHHHH
Q 048643 136 IVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQ------THCALQKAAQ 209 (506)
Q Consensus 136 ~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~------~H~s~~ka~~ 209 (506)
.+.+.++.+.|.+. .+++++...|++.++.+... .+ .|++|.- ..+.+....+
T Consensus 51 ~v~~ll~~ltgAea---------A~VvNnnaAAv~L~l~~la~-----------~~-EvIvsRGelVeiGgsFRip~vm~ 109 (367)
T PF03841_consen 51 HVEELLCELTGAEA---------ALVVNNNAAAVLLALNTLAK-----------GK-EVIVSRGELVEIGGSFRIPDVMR 109 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccc---------cccccccccccccccccccc-----------cc-ccccccccccccccccccccccc
Confidence 34567788888864 46666656666665554211 11 2333432 2344667777
Q ss_pred HhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCC--CCcc--cChhHHHHHHHHhCCEEEee
Q 048643 210 IVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTA--ITAV--DPLKPLCDVAKQFGIWVHVD 285 (506)
Q Consensus 210 ~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~--tG~i--dpl~~I~~ia~~~g~~lhVD 285 (506)
..|. +++.|-+.. +..+++.+++|.++++ ++.-.+.+|. .|.. -+++++++++++|++++++|
T Consensus 110 ~sGa---~lvEVGttN----~t~~~Dye~AI~e~Ta------~ll~Vh~Sn~~i~GFt~~~~~~el~~la~~~~lp~i~D 176 (367)
T PF03841_consen 110 QSGA---RLVEVGTTN----RTHLSDYEKAITENTA------ALLKVHTSNFRIQGFTGEVSLEELAELAKEHGLPVIVD 176 (367)
T ss_dssp ----------------------------------------------------------------HHHHHHHHHT--EEEE
T ss_pred cccc---ccccccccc----cccccccccccccccc------ccccccccccccccccccccHHHHHHHHhhcCCcEEEE
Confidence 7788 888887642 7788999999999886 4555554444 2222 37999999999999999999
Q ss_pred ccccccccc-----C--ccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeC
Q 048643 286 AAYAGSACI-----C--PEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKD 332 (506)
Q Consensus 286 aA~gg~~~~-----~--~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~ 332 (506)
.+-|...-+ . |..+..+. .++|-+++++.|.|+.|- +|+++-|.
T Consensus 177 lgsG~l~dl~~~gl~~Ep~v~~~~~--~GaDlV~fSGdKlLGGPQ-aGiI~Gkk 227 (367)
T PF03841_consen 177 LGSGLLVDLSPYGLPDEPTVQEYLA--AGADLVTFSGDKLLGGPQ-AGIIVGKK 227 (367)
T ss_dssp -TTHHHHHHHTT----------CCC--CT-SEEEEETTSSSSS-S--EEEEEEH
T ss_pred CCCCCCcCcccccCccccHHHHHhh--cCCCEEEEECCCcCCCCC-eEEEEeCH
Confidence 865443211 1 11122221 379999999999999986 67776664
No 389
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=97.91 E-value=0.0029 Score=59.94 Aligned_cols=330 Identities=14% Similarity=0.082 Sum_probs=179.7
Q ss_pred CHHHHHHHHHHhhcCCCCccc---c---cChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHH
Q 048643 104 SIAGFLGEMLSSGFNVVGFNW---I---SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAAR 177 (506)
Q Consensus 104 ~~~~~~~~~l~~~~n~~~~~~---~---~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar 177 (506)
.+.+++-++-...+|-++... + .+.-+..+-......+.+|++.|+.+ .-.++++|||.-. .|+..
T Consensus 18 lp~~VL~e~qkdl~n~~g~GisV~EmSHRsk~f~kii~~tes~lreLlniPdn~-----~vlf~QGGGt~qF-aAv~l-- 89 (370)
T KOG2790|consen 18 LPESVLLEAQKDLLNFNGSGISVMEMSHRSKDFAKIINDTESLLRELLNIPDNY-----KVLFLQGGGTGQF-AAVPL-- 89 (370)
T ss_pred CCHHHHHHHHHHhhccCCCcceEEEecccchhHHHHHHHHHHHHHHHHcCCCce-----eEEEEeCCCcccc-cccch--
Confidence 455666666666666554321 2 23345556667788999999999986 2456677776332 22211
Q ss_pred HHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCc-ccCHHHHHHHHHHHHhcCCccEEEEEe
Q 048643 178 DRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSY-GLSPDSLLTQINLDVEAGLVPLFLCAT 256 (506)
Q Consensus 178 ~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~-~~d~~~L~~~i~~~~~~g~~p~~Vv~t 256 (506)
+.. . +..|..-..|++..-.--+..+|-++.-. +.+..+..+..=+ -.|.+.++... +- -+|..+
T Consensus 90 NL~-g--lK~g~~AdYiVTGsWS~KA~~EAkk~~~~---~~V~~~~k~y~ygkvPd~~~w~~~~--da------~yvyyC 155 (370)
T KOG2790|consen 90 NLI-G--LKHGRCADYVVTGSWSAKAAEEAKKYGTP---NIVIPKLKSYTYGKVPDPSTWELNP--DA------SYVYYC 155 (370)
T ss_pred hhh-c--cccCCccceEEeccccHHHHHHHHhhCCc---eEEeccccccccCcCCChhhcccCC--Cc------cEEEEe
Confidence 100 0 11222334455554444455555544333 4444333221001 23444433221 11 178888
Q ss_pred ccCCCCCcc-cChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchh
Q 048643 257 IGTTAITAV-DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSA 335 (506)
Q Consensus 257 ~gtt~tG~i-dpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~ 335 (506)
...|..|.- |++. +-.-+|..++.|-+-- + ++... .+..-+.|...++|..+ |.|..++++|+.-
T Consensus 156 aNETVHGVEf~~~P----~~~~~~~vlVaDmSSn--f-lSrpv-----Dvsk~gvi~aGAQKN~G-~aG~Tvvivr~dl- 221 (370)
T KOG2790|consen 156 ANETVHGVEFDFIP----VNDPKGAVLVADMSSN--F-LSRPV-----DVSKFGVIFAGAQKNVG-PAGVTVVIVRKDL- 221 (370)
T ss_pred cCceeeceecCCCC----CCCCCCceEEEecccc--h-hcCCc-----cchhcceEEeccccccC-ccccEEEEEehhh-
Confidence 888999864 4443 2233577788885321 1 11111 12356778889999887 6778888888753
Q ss_pred HHhhhcCCccccCCccccCCCccCCCCccccCCCC-CCchHHHHHHHHh-chhHHHHHHHHHHHHHHHHHHHHHcCCCCc
Q 048643 336 LVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRR-FRSLKLWLVIRNY-GVANLRHFLRSHVNMAKLFERLVASDKRVS 413 (506)
Q Consensus 336 l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~l~~~-G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~ 413 (506)
+.......|.-+.-...+ .+.++-.+-+ |...-.-+.++.+ ..-|+..+-+...+.++.+.+.|.+..+|-
T Consensus 222 lg~~~~~tP~v~dyk~~~-------~NnSlyNTpP~f~iy~~~Lv~~~il~~GGl~a~e~~n~~KskllYd~iD~s~gfy 294 (370)
T KOG2790|consen 222 LGNALDITPSVLDYKIMD-------KNNSLYNTPPCFGIYVMGLVFEWILEKGGLAAMEKLNQEKSKLLYDAIDNSNGFY 294 (370)
T ss_pred hcccccCCccccceeeec-------cccccccCCCeeeeeehhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCCeE
Confidence 222222222221100000 0011111211 1221222333333 234677788888999999999999987876
Q ss_pred -----c-----ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHH
Q 048643 414 -----P-----SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERH 483 (506)
Q Consensus 414 -----p-----~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~ed 483 (506)
| ..|+||+.++ ++-.++++.-.+++.+-+-+ ++..+.+|.++-|. .+-++
T Consensus 295 ~cpVe~~~RS~MNV~Fri~~d-----------------~Le~eFLkeA~~~~mv~LKG--hRSVGGiRASlYNA-isv~~ 354 (370)
T KOG2790|consen 295 RCPVEPSVRSRMNVPFRIEKD-----------------ELEAEFLKEAAKEHMVQLKG--HRSVGGIRASLYNA-ISVEE 354 (370)
T ss_pred Ecccchhhhhhcccceeecch-----------------HHHHHHHHHHHHhhhhcccc--ccccccchhhhhcc-ccHHH
Confidence 3 7799999753 44555555555555432222 34456799999664 55669
Q ss_pred HHHHHHHHHHHHH
Q 048643 484 VMVAWTMVQEQLE 496 (506)
Q Consensus 484 i~~li~~l~~~~~ 496 (506)
+++|++-+++..+
T Consensus 355 ~q~L~~~m~~F~k 367 (370)
T KOG2790|consen 355 VQKLAAFMKEFQK 367 (370)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999888765
No 390
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=97.70 E-value=0.0091 Score=57.41 Aligned_cols=286 Identities=15% Similarity=0.148 Sum_probs=162.0
Q ss_pred cEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHH
Q 048643 158 GGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLL 237 (506)
Q Consensus 158 ~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~ 237 (506)
.|+=+-+||.|+..+..-. ..++ .+-.||+|.++...........|+- .+...|.=..++-.+|++.+.
T Consensus 101 ~~vQslsGTGAl~~~A~Fl-~~~~--------~~~~VY~SnPTW~nH~~if~~aGf~--tv~~Y~yWd~~~k~~d~e~~L 169 (410)
T KOG1412|consen 101 FGVQSLSGTGALRIAADFL-ATFY--------NKNTVYVSNPTWENHHAIFEKAGFT--TVATYPYWDAENKCVDLEGFL 169 (410)
T ss_pred cceeeccccchhhhhHHHH-HHhc--------ccceeEecCCchhHHHHHHHHcCCc--eeeeeeeecCCCceecHHHHH
Confidence 4666667787776553322 2221 3456999999988888888888852 444444422234589999988
Q ss_pred HHHHHHHhcCCccEEEEEeccCCCCCcccC----hhHHHHHHHHhCCEEEeecccccccccCccc-----hhhh-cCCCC
Q 048643 238 TQINLDVEAGLVPLFLCATIGTTAITAVDP----LKPLCDVAKQFGIWVHVDAAYAGSACICPEF-----QHFI-DGVEG 307 (506)
Q Consensus 238 ~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp----l~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~-----~~~~-~gi~~ 307 (506)
..|+..... -.+|.-.+..|+||. || ..+|+++.++.++...-|-||-|++.-.+.. |..+ .|+|
T Consensus 170 sdl~~APe~---si~iLhaCAhNPTGm-DPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~g~e- 244 (410)
T KOG1412|consen 170 SDLESAPEG---SIIILHACAHNPTGM-DPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYFVEQGFE- 244 (410)
T ss_pred HHHhhCCCC---cEEeeeccccCCCCC-CCCHHHHHHHHHHHHhcCceeeeehhhcccccCCccccHHHHHHHHhcCCe-
Confidence 888776432 223333344788885 66 6789999999999999999998876543321 1111 1221
Q ss_pred CCeeEEcCccccCC--C-CcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCccccCCCCCCch-HHHH--HHH
Q 048643 308 ADSFSLNAHKWFFT--T-LDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSL-KLWL--VIR 381 (506)
Q Consensus 308 aDsi~~~~hK~l~~--p-~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al-~~~~--~l~ 381 (506)
=.++-++-|.++. + .||=-+.++++.......+...--++..... .+.+ +. +.. ++.- .++
T Consensus 245 -~fv~QSFaKNfGlYneRvGnltvv~~n~a~i~~v~SQl~lviR~~~SN---PPAy------GA---rIV~kvL~tP~lr 311 (410)
T KOG1412|consen 245 -LFVCQSFAKNFGLYNERVGNLTVVVNNPAVIAGVKSQLTLVIRSNWSN---PPAY------GA---RIVHKVLSTPELR 311 (410)
T ss_pred -EEEEhhhhhhcccccccccceEEEecChhHHHHHHHHHHHHHhhccCC---Ccch------hh---HHHHHHhcCHHHH
Confidence 2456677787763 2 3344456677654332221111111111000 0000 00 100 0000 011
Q ss_pred HhchhHHHHHHHHHHHHHHHHHHHHHcC--CC-Cc--c-ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcC
Q 048643 382 NYGVANLRHFLRSHVNMAKLFERLVASD--KR-VS--P-SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASG 455 (506)
Q Consensus 382 ~~G~~g~~~~i~~~~~~a~~l~~~l~~~--~~-~~--p-~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g 455 (506)
..=...++.|-.|..+++..|++.|..+ || |. . -+-.|.|.+- +..-.+.|.++.
T Consensus 312 e~W~~sik~MssRI~~MR~aLrd~L~aL~TPGtWDHI~~QiGMFSyTGL-------------------tp~qV~~li~~h 372 (410)
T KOG1412|consen 312 EQWIQSIKTMSSRIKKMRTALRDHLVALKTPGTWDHITQQIGMFSYTGL-------------------TPAQVDHLIENH 372 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHhhccceeecCC-------------------CHHHHHHHHHhc
Confidence 1112346778888899999999999875 33 22 1 2333444332 344456777777
Q ss_pred cEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHc
Q 048643 456 KAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAFLT 500 (506)
Q Consensus 456 ~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l~~ 500 (506)
.+|+... | |++++..++. .++...++|.+.++.+..
T Consensus 373 ~vyLl~~---G----RInisGLN~~--NveyVAkAIde~Vr~~~~ 408 (410)
T KOG1412|consen 373 KVYLLSD---G----RINISGLNMK--NVEYVAKAIDETVRAIKS 408 (410)
T ss_pred eEEEecC---C----cEeeeccccc--cHHHHHHHHHHHHHhhcc
Confidence 7776543 2 7777554333 788888999988887653
No 391
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=97.02 E-value=0.1 Score=50.13 Aligned_cols=296 Identities=11% Similarity=0.022 Sum_probs=155.8
Q ss_pred cEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHH--------hCCCC-CCeEEEecCC--C
Q 048643 158 GGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQI--------VGIDL-KNFRAIKTTK--S 226 (506)
Q Consensus 158 ~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~--------~G~g~-~~v~~v~~~~--~ 226 (506)
..+|+++||+||-.||..||+... ..++|......|--+....++ -|... +-|..-|+.+ .
T Consensus 104 vc~F~NSGSEANDLALRLAR~ftk--------hqDvItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyr 175 (452)
T KOG1403|consen 104 VCFFVNSGSEANDLALRLARNFTK--------HQDVITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYR 175 (452)
T ss_pred EEEEecCCchhhHHHHHHHHhhcc--------cCceEEEechhccceeeeeeccceeccCCCCcCCCceeEecCCccccc
Confidence 679999999999999999998521 334554444444222211111 12211 2233444421 0
Q ss_pred CC-----------cccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC----hhHHHHHHHHhCCEEEeecccccc
Q 048643 227 SS-----------YGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP----LKPLCDVAKQFGIWVHVDAAYAGS 291 (506)
Q Consensus 227 ~~-----------~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp----l~~I~~ia~~~g~~lhVDaA~gg~ 291 (506)
+. +..-.+.+++.+++....|......++.+-.+--|.|-| ++++++..+.+|-.++.|..+-|+
T Consensus 176 GK~r~~~~~~a~~~~~Yad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGF 255 (452)
T KOG1403|consen 176 GKFRDKMYPDADMGALYADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGF 255 (452)
T ss_pred cccccccCCcccchhhhhhHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhcc
Confidence 11 123346677777777666655444444444444566644 788999999999999999998776
Q ss_pred cccCccc-hhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcC-CccccCCccccCCCccCCCCccccCCC
Q 048643 292 ACICPEF-QHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLST-NPEYLKNKATESKQVVDYKDWQITLSR 369 (506)
Q Consensus 292 ~~~~~~~-~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~sr 369 (506)
......| .+.+-+. --|.+++. |-++-..+.+++.++.+ +.++|.. ...|+..- ++.
T Consensus 256 GRvG~hyWafq~y~f-iPDIVtmg--KpmGNGhPVa~Vattke--IA~Af~atgv~YFNTy----------------GGn 314 (452)
T KOG1403|consen 256 GRVGSHYWAFQTYNF-IPDIVTMG--KPMGNGHPVAAVATTKE--IAQAFHATGVEYFNTY----------------GGN 314 (452)
T ss_pred cccchhhhhhhhhcc-ccchheec--ccCCCCCeeeEEeccHH--HHHHhccccceehhcc----------------CCC
Confidence 5544322 1111111 34666643 55554455666666543 3456754 44565431 222
Q ss_pred CCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCC-CCc----c-ceEEEe---ecCCCcccccccccchHHHH
Q 048643 370 RFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDK-RVS----P-SAVMDK---LKPKYENCHSQQLVTEEEAI 440 (506)
Q Consensus 370 ~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~-~~~----p-~~v~f~---~~~~~~~~~~~~~~~~~~~~ 440 (506)
+.......+.|+....+ ++.++..++..+|...|++.. ..+ - ++-.|. +....... ++.
T Consensus 315 PVsCAv~laVm~v~e~E---~Lq~ha~~vG~~L~~lL~~~k~kh~~IGDvRGvGLFiGIdLVkD~~tR----tP~----- 382 (452)
T KOG1403|consen 315 PVSCAVGLAVMRVCEDE---NLQEHAQQVGEKLEVLLRRLKQKHECIGDVRGVGLFIGIDLVKDRKTR----TPD----- 382 (452)
T ss_pred chhHHHHHHHHHHHhhh---hHHHHHHHHHHHHHHHHHHHhhhccceeccccceEEEeeeeecccccC----CCc-----
Confidence 22223333445544444 455666777778877776542 122 1 333332 11110000 010
Q ss_pred HHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 048643 441 NEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLE 496 (506)
Q Consensus 441 ~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~ 496 (506)
.+....+..+|.+...+.++..- .+++.+++-. ..--+++++++++..|+++.-
T Consensus 383 tk~A~~~v~rlke~y~VLlsaDG-Ph~NilKiKP-PmCFneena~e~v~~ld~iLT 436 (452)
T KOG1403|consen 383 TKEAHWVVNRLKELYRVLLSADG-PHRNILKIKP-PMCFNEENADEFVLGLDEILT 436 (452)
T ss_pred HHHHHHHHHHHHHhhhEEEecCC-CCCceeecCC-CcccChhhHHHHHHHHHHHHH
Confidence 22345666677776655555422 2245666543 112366788888887777653
No 392
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=96.64 E-value=0.06 Score=51.70 Aligned_cols=152 Identities=16% Similarity=0.164 Sum_probs=95.3
Q ss_pred HHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCCCC--
Q 048643 139 DWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGIDLK-- 216 (506)
Q Consensus 139 ~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~-- 216 (506)
+-.++.||.+.... .--|. +||.|+-+||.-.... .+-.+|+....+-.+.+...+-|-|..
T Consensus 72 ~vyA~vf~aE~a~V-----Rpq~i-sGTHAI~~aLfg~LRp----------gDell~i~G~PYDTLeevIG~rg~~~gSL 135 (416)
T COG4100 72 RVYAQVFGAEAALV-----RPQII-SGTHAIACALFGILRP----------GDELLYITGSPYDTLEEVIGLRGEGQGSL 135 (416)
T ss_pred HHHHHHhcccccee-----eeeee-cchhHHHHHHHhccCC----------CCeEEEecCCcchhHHHHhccCCCCcccH
Confidence 34788888876531 22233 4577777666543321 344566666666677766544332211
Q ss_pred -----CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEE--ecc--CCCCCcccChhHHHHHHHHh--CCEEEee
Q 048643 217 -----NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCA--TIG--TTAITAVDPLKPLCDVAKQF--GIWVHVD 285 (506)
Q Consensus 217 -----~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~--t~g--tt~tG~idpl~~I~~ia~~~--g~~lhVD 285 (506)
..+.||... +|.+|.+.+++++.+.++ +|-. +.| --+.-.|++++++..+.++. ++.+.||
T Consensus 136 ~dfgi~Y~~v~Lt~--~gkiD~~~v~~~i~~~tk------li~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVD 207 (416)
T COG4100 136 KDFGIKYKAVPLTA--DGKIDIQAVKTAISDRTK------LIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVD 207 (416)
T ss_pred HHhCcceeeccccc--CCcccHHHHHHhcCccce------EEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEe
Confidence 556778765 469999999999998775 3322 222 22344568888888888886 5788899
Q ss_pred cccccccccCccchhhhcCCCCCCeeEEcCccccC
Q 048643 286 AAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFF 320 (506)
Q Consensus 286 aA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~ 320 (506)
-|||-+.--. +.-+. +||.+..+.-|.-+
T Consensus 208 NCYGEFvE~~-EPt~v-----GaDliAGSLIKNpG 236 (416)
T COG4100 208 NCYGEFVEEK-EPTHV-----GADLIAGSLIKNPG 236 (416)
T ss_pred ccchhhhhcc-Ccccc-----chhhhccceeeCCC
Confidence 9997764221 11121 78888888777654
No 393
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=96.26 E-value=0.24 Score=48.78 Aligned_cols=216 Identities=14% Similarity=0.161 Sum_probs=115.0
Q ss_pred CHHHHHHHHHHHHhcCCccEEEEEe----ccCCCCCcccChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCC-
Q 048643 232 SPDSLLTQINLDVEAGLVPLFLCAT----IGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVE- 306 (506)
Q Consensus 232 d~~~L~~~i~~~~~~g~~p~~Vv~t----~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~- 306 (506)
.++.+|+.|.+-.++......+++. -|.-+.++-|=+..+.+||++||+-++||..+.|+..-..-+.+--.+++
T Consensus 254 Cl~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~ 333 (484)
T KOG1405|consen 254 CLAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDS 333 (484)
T ss_pred HHHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCCC
Confidence 4567777787765433222333332 24444555567899999999999999999998766543332322222232
Q ss_pred CCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchh
Q 048643 307 GADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVA 386 (506)
Q Consensus 307 ~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~ 386 (506)
-.|.+|++ -|+.. .| ++ .+. .|..+.+|-- +..| ++-+++.+-+-..++.+.+
T Consensus 334 PpD~vTFS-KK~q~----gG-ff-h~~-----~frpn~pYri-----------fNTW---mGdP~k~lll~~vv~~I~~- 386 (484)
T KOG1405|consen 334 PPDVVTFS-KKFQT----GG-FF-HDE-----EFRPNEPYRI-----------FNTW---MGDPSKNLLLEEVVQEIKR- 386 (484)
T ss_pred Cccceehh-hhhhc----Cc-cc-cCc-----ccCCCchHHH-----------hhhh---cCChHHHHHHHHHHHHHhH-
Confidence 46777754 23221 12 11 111 1222223311 0111 2223333433344444433
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcC----CCCc---c--ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcE
Q 048643 387 NLRHFLRSHVNMAKLFERLVASD----KRVS---P--SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKA 457 (506)
Q Consensus 387 g~~~~i~~~~~~a~~l~~~l~~~----~~~~---p--~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~ 457 (506)
+.++++.....++|..+|.++ |+.- . +.++-+-.+. ...-.++...+..+|..
T Consensus 387 --~~Ll~n~~~vG~~l~~gL~~Lq~~~p~~~~~~RGrGTF~a~d~ps----------------~~~Rdk~i~~~~~nGv~ 448 (484)
T KOG1405|consen 387 --EDLLNNVAHVGKALLKGLLELQAKYPGKINNLRGRGTFIAWDCPS----------------GSIRDKLILIARLNGVN 448 (484)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHhCchhhhcccccceEEEEeCCC----------------hHHHHHHHHHHHHcCce
Confidence 345666677778888877653 4332 1 3333333333 23345566666667763
Q ss_pred EEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 048643 458 YMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEA 497 (506)
Q Consensus 458 ~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~ 497 (506)
+++. |...+|+-.+ .--++.+.+-+++.+.++...
T Consensus 449 -~GGC---g~~siRfRPs-Lvf~~~Ha~i~l~~~~k~l~~ 483 (484)
T KOG1405|consen 449 -LGGC---GDKSIRFRPS-LVFRKHHADIFLDIFDKILAG 483 (484)
T ss_pred -eccc---ccceeeeccc-eeehhhhHHHHHHHHHHHhcc
Confidence 3332 3456676653 334666999999999887653
No 394
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=95.34 E-value=0.29 Score=48.32 Aligned_cols=287 Identities=15% Similarity=0.082 Sum_probs=133.5
Q ss_pred hHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHH-HH
Q 048643 130 ATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQK-AA 208 (506)
Q Consensus 130 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~k-a~ 208 (506)
..+||+++ +.|-++.|--... +.-++.+.|+.-.+.|..-|.... .....+...|+.+ ..+|+..+ ..
T Consensus 45 s~eL~~~I-r~LH~~VGNAvt~-----gr~IV~GtGsTQL~~AalyALSp~----~~~~~~p~~VVa~-aPYY~~Y~~qt 113 (363)
T PF04864_consen 45 SPELERQI-RRLHRVVGNAVTD-----GRYIVFGTGSTQLFNAALYALSPN----ASPSSSPASVVAA-APYYSSYPEQT 113 (363)
T ss_dssp -HHHHHHH-HHHHHHH-SB--T-----TSEEEEECHHHHHHHHHHHHHCHH----T-TTSSSEEEEE--SS--CHHHHHC
T ss_pred cHHHHHHH-HHHHHHhcccccc-----CcEEEEcCCHHHHHHHHHHhcCCC----CCCCCCCceeEec-CCCccchHHHH
Confidence 35677654 5566666643331 233444545544444444443321 0011134455555 45555444 44
Q ss_pred HHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeeccc
Q 048643 209 QIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAY 288 (506)
Q Consensus 209 ~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~ 288 (506)
..+.- ......-|.. .+. .. ....+++=++|.++|+.|.+-. .+++.-+..++-|=||
T Consensus 114 ~~f~s---~~y~w~Gda~-~~~----------~~---~~~~~~IElVTSPNNPDG~lr~-----~V~~g~~~k~I~D~AY 171 (363)
T PF04864_consen 114 DFFDS---RLYKWAGDAS-NFK----------NS---DNPSPYIELVTSPNNPDGQLRE-----AVLNGSSGKVIHDLAY 171 (363)
T ss_dssp CCT-B---TTEEEEEECC-CGT----------T----S-CCGEEEEEESS-TTT-----------SSTTTEEEEEEE-TT
T ss_pred Hhccc---cCccccccHH-hhc----------cC---CCCCCeEEEEeCCCCCcccccc-----hhcCCCCcceeeeeee
Confidence 44433 3344443321 121 11 1234788899999999998631 1234445667889888
Q ss_pred ccccc-cCccchhhhcCCCCCCeeEEcCccccC-CCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCcccc
Q 048643 289 AGSAC-ICPEFQHFIDGVEGADSFSLNAHKWFF-TTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQIT 366 (506)
Q Consensus 289 gg~~~-~~~~~~~~~~gi~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~ 366 (506)
-.... +.+. -..=|.+-+...|.-+ +.--.|..++||++...+.. .|+... ++.
T Consensus 172 YWPhyTpI~~-------~aD~DiMLFT~SK~TGHAGSR~GWAlVKD~~Va~kM~----~y~~ln-------------TiG 227 (363)
T PF04864_consen 172 YWPHYTPITA-------PADHDIMLFTLSKLTGHAGSRFGWALVKDEEVAKKMT----KYMELN-------------TIG 227 (363)
T ss_dssp -STTTS---S--------B--SEEEEEHHHHCS-GGG-EEEEEES-HHHHHHHH----HHHHHH-------------CSS
T ss_pred ecccccccCC-------CCCCceEEEEEecccCccccccceeeecCHHHHHHHH----HHHHHh-------------ccc
Confidence 66533 1211 1155788888888665 55568999999987655432 355321 333
Q ss_pred CCCC--CCchHHHHHHH-Hhchh-----HHHHHHHHHHHHHHHHHHHHHcCCCCc-c------------------ceEEE
Q 048643 367 LSRR--FRSLKLWLVIR-NYGVA-----NLRHFLRSHVNMAKLFERLVASDKRVS-P------------------SAVMD 419 (506)
Q Consensus 367 ~sr~--~~al~~~~~l~-~~G~~-----g~~~~i~~~~~~a~~l~~~l~~~~~~~-p------------------~~v~f 419 (506)
.||- .|++++..++. .++.+ -+.--.+...+.-+.|++.+.+...|. | .....
T Consensus 228 vS~dsQLRa~kiLk~v~~~~~~~~~~~~~F~f~~~~M~~RW~~L~~~~~~S~rFSLq~~~~~yC~ff~~~~~psPafAWl 307 (363)
T PF04864_consen 228 VSRDSQLRALKILKVVLDGYGTEKGTEDIFHFGYSTMRERWEKLRAAVSASKRFSLQKFSPQYCNFFKRVREPSPAFAWL 307 (363)
T ss_dssp --HHHHHHHHHHHHHHHHHCCHHTTTTSHHHHHHHHHHHHHHHHHHHHCCSSSEEE---SCEEETTTTCEEE---SEEEE
T ss_pred CcHHHHHHHHHHHHHHHhcccCCCCccchHHHHHHHHHHHHHHHHHHHHhcCceecCcCCchhccccccccCCCCCeEEE
Confidence 3432 45666554432 22221 122222334445566677776665555 1 33334
Q ss_pred eecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeEC-CEEEEEEEecCCCCCHHHHHHHHHHHHHH
Q 048643 420 KLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCG-GIYAMRFAVGATLTEERHVMVAWTMVQEQ 494 (506)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~-g~~~lR~~~~~~~tt~edi~~li~~l~~~ 494 (506)
++.... ++ ...+.|.+.|++--++..+. +..++|+|... ++++.+.|++.|..+
T Consensus 308 kCe~ee---------------d~---DC~~~l~~~~I~tr~G~~fga~~ryVRlSml~---~~d~Fd~l~~rL~~l 362 (363)
T PF04864_consen 308 KCEREE---------------DE---DCYAVLREAKIITRSGVLFGADSRYVRLSMLK---RDDDFDQLLERLSKL 362 (363)
T ss_dssp EESSCG---------------GS---SHHHHHHCTTEEEEEGGGGTS-TTEEEEESSS----HHHHHHHHHHHHCC
T ss_pred ecCCcc---------------cc---cHHHHHHhCCcccCCCCccCCCCCeEEEeccC---CHHHHHHHHHHHHhh
Confidence 443220 11 22233334455333333222 35689999864 777999999988754
No 395
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=93.51 E-value=0.88 Score=44.86 Aligned_cols=246 Identities=15% Similarity=0.154 Sum_probs=136.3
Q ss_pred CCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC--
Q 048643 190 SKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP-- 267 (506)
Q Consensus 190 ~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp-- 267 (506)
+.-.||++.++.--..+.....|+ .+.....-...+..+|.+.+-+.+.+... | -++++=-+.+++||. ||
T Consensus 145 ~~~~I~ip~PTWgNh~~if~~ag~---~~~~yrYyd~~t~gld~~g~ledl~~~p~-g--s~ilLhaCaHNPTGv-DPt~ 217 (427)
T KOG1411|consen 145 PSRDIYIPDPTWGNHKNIFKDAGL---PVKFYRYYDPKTRGLDFKGMLEDLGEAPE-G--SIILLHACAHNPTGV-DPTK 217 (427)
T ss_pred cccceeecCCcccccCccccccCc---ceeeeeeccccccccchHHHHHHHhcCCC-C--cEEEeehhhcCCCCC-CccH
Confidence 455789999887666666677788 55555442223568898887776765432 2 233333446788874 55
Q ss_pred --hhHHHHHHHHhCCEEEeecccccccccCcc---c--hhhh-cCCCCCCeeEEcCccccCC---CCcceEEEEeCchhH
Q 048643 268 --LKPLCDVAKQFGIWVHVDAAYAGSACICPE---F--QHFI-DGVEGADSFSLNAHKWFFT---TLDCCCLWVKDPSAL 336 (506)
Q Consensus 268 --l~~I~~ia~~~g~~lhVDaA~gg~~~~~~~---~--~~~~-~gi~~aDsi~~~~hK~l~~---p~~~g~~~~r~~~~l 336 (506)
.++|.++.++.+..-..|.||-|++.-... + |..+ +|. -=.++.+.-|.++. -.||=-++|++.+..
T Consensus 218 eqw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~~g~--~~~laQSyAKNMGLYgERvGa~svvc~~ad~A 295 (427)
T KOG1411|consen 218 EQWEKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVEDGH--EILLAQSYAKNMGLYGERVGALSVVCKDADEA 295 (427)
T ss_pred HHHHHHHHHhhhccccchhhhhhcccccCCchhhHHHHHHHHHcCC--ceEeehhhhhhcchhhhccceeEEEecCHHHH
Confidence 788999999999999999999887653211 1 1111 111 11234444465542 122322455555432
Q ss_pred Hhhh-----cCCccccCCccccCCCccCCCCccccCCCCC-------CchHHHHHHHHhchhHHHHHHHHHHHHHHHHHH
Q 048643 337 VSSL-----STNPEYLKNKATESKQVVDYKDWQITLSRRF-------RSLKLWLVIRNYGVANLRHFLRSHVNMAKLFER 404 (506)
Q Consensus 337 ~~~~-----~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~-------~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~ 404 (506)
.+.- -..|.|...+- .++|-. .-..-|. .-...|.+|.+.+.+.|.+
T Consensus 296 ~rV~SQlk~liRpmYSnPP~--------------hGArIv~~Il~d~~l~~~W~-------~evk~MadRi~~mR~~L~d 354 (427)
T KOG1411|consen 296 KRVESQLKILIRPMYSNPPL--------------HGARIVATILSDPDLKNQWL-------GEVKGMADRIISMRQQLFD 354 (427)
T ss_pred HHHHHHHHHHhcccccCCCc--------------cchhhhhhccCChHHHHHHH-------HHHHHHHHhhhhhHHHHhH
Confidence 2111 12344443211 111110 0112222 2356688899999999999
Q ss_pred HHHcCC---CCc--c---ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecC
Q 048643 405 LVASDK---RVS--P---SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGA 476 (506)
Q Consensus 405 ~l~~~~---~~~--p---~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~ 476 (506)
.|++.. .|+ . +++||.-.. .+-.+.|.++-.+|++.. -|+|+..
T Consensus 355 ~L~~~gs~~~W~hI~~QIGMF~fTgl~---------------------peQv~~l~ke~~iYmT~d-------GRiS~aG 406 (427)
T KOG1411|consen 355 ALEKEGSPGNWSHITKQIGMFCFTGLN---------------------PEQVDWLTKEYHIYLTKD-------GRISMAG 406 (427)
T ss_pred HhhcCCCCccHHHHHHhhheeeecCCC---------------------HHHHHHHHhhheeeeccC-------ceEeecc
Confidence 998752 133 1 778885322 233445555555666531 2777754
Q ss_pred CCCCHHHHHHHHHHHHHHH
Q 048643 477 TLTEERHVMVAWTMVQEQL 495 (506)
Q Consensus 477 ~~tt~edi~~li~~l~~~~ 495 (506)
..+. .+..+.++|.++.
T Consensus 407 ~ss~--nV~yLa~aih~vt 423 (427)
T KOG1411|consen 407 LSSS--NVPYLADAIHAVT 423 (427)
T ss_pred cccc--CCcccchhhHhHh
Confidence 3222 6777777776654
No 396
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=89.14 E-value=0.86 Score=40.24 Aligned_cols=62 Identities=5% Similarity=-0.055 Sum_probs=44.5
Q ss_pred cccChhhHHHHHHHHHHHHHHcCC--CCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCc
Q 048643 124 WISSPAATELENIVMDWLGQMLKL--PKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTH 201 (506)
Q Consensus 124 ~~~~p~~~~lE~~~~~~la~l~g~--~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H 201 (506)
|....+..++.+.+++|+.+.+|. +.+ ....++|+|++.++..++.+..+ ++..|+++...+
T Consensus 88 Y~~~~G~~~lR~AiA~~l~~~~g~~v~~~-----pd~Ivvt~Ga~~al~~l~~~l~d-----------pGD~VlVp~P~Y 151 (153)
T PLN02994 88 FQDYHGLANFRKAIANFMAEARGGRVKFD-----ADMIVLSAGATAANEIIMFCIAD-----------PGDAFLVPTPYY 151 (153)
T ss_pred CCCCCCcHHHHHHHHHHHHHHhCCCCccc-----hhheEEcCCHHHHHHHHHHHHcC-----------CCCEEEEeCCCC
Confidence 333445688999999999999883 322 13789999999888776666544 667777777665
No 397
>COG0386 BtuE Glutathione peroxidase [Posttranslational modification, protein turnover, chaperones]
Probab=76.93 E-value=15 Score=32.19 Aligned_cols=84 Identities=14% Similarity=0.275 Sum_probs=58.6
Q ss_pred CcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC--hhHHHHHHHH-hCCE------EEeecccccccccCccc
Q 048643 228 SYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP--LKPLCDVAKQ-FGIW------VHVDAAYAGSACICPEF 298 (506)
Q Consensus 228 ~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp--l~~I~~ia~~-~g~~------lhVDaA~gg~~~~~~~~ 298 (506)
.++-..+.||+..++-..+| ++|+-.+++-+|.-+| -+||.++|.. ||+- ++|-|.-+- |-+
T Consensus 38 GfTpQYegLe~Ly~ky~~~G----f~VLgFPcNQF~~QEPg~~eEI~~fC~~~YgVtFp~f~Ki~VnG~~a~-----PLy 108 (162)
T COG0386 38 GFTPQYEGLEALYKKYKDKG----FEVLGFPCNQFGGQEPGSDEEIAKFCQLNYGVTFPMFSKIDVNGKNAH-----PLY 108 (162)
T ss_pred CCcHhHHHHHHHHHHHhhCC----cEEEeccccccccCCCCCHHHHHHHHHhccCceeeeeeEEeecCCCCC-----cHH
Confidence 35667889999998888888 7889999999997765 7999999985 7763 355443211 223
Q ss_pred hhhhc---CCCCCCeeEEcCccccC
Q 048643 299 QHFID---GVEGADSFSLNAHKWFF 320 (506)
Q Consensus 299 ~~~~~---gi~~aDsi~~~~hK~l~ 320 (506)
+++.. |.-....|-|+++|+|-
T Consensus 109 ~~L~~~~~g~~~~~~IkWNFtKFLv 133 (162)
T COG0386 109 KYLKEQKPGKLGGKDIKWNFTKFLV 133 (162)
T ss_pred HHHHhcCCCCccCCccceeeEEEEE
Confidence 33322 22246788999999763
No 398
>PF07071 DUF1341: Protein of unknown function (DUF1341); InterPro: IPR010763 Members of this family of relatively uncommon proteins are found in both Gram-positive (e.g. Enterococcus faecalis) and Gram-negative (e.g. Aeromonas hydrophila) bacteria, as part of a cluster of conserved proteins. The function is unknown.; PDB: 3NZR_D 3LM7_A 3M0Z_B 3M6Y_A 3N73_A 3MUX_A.
Probab=69.09 E-value=27 Score=32.03 Aligned_cols=67 Identities=7% Similarity=0.093 Sum_probs=43.0
Q ss_pred HHHHHHHHh-CCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc--cChhHHHHHHHHhC
Q 048643 203 ALQKAAQIV-GIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV--DPLKPLCDVAKQFG 279 (506)
Q Consensus 203 s~~ka~~~~-G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i--dpl~~I~~ia~~~g 279 (506)
+++.++.++ .+|...+.+.|.. |.-.++.|+..-+.+.++|. -+ -+||-| |.+++|.++|.+.|
T Consensus 136 ~vetAiaml~dmG~~SiKffPm~----Gl~~leE~~avAkA~a~~g~-----~l----EPTGGIdl~N~~~I~~i~l~aG 202 (218)
T PF07071_consen 136 PVETAIAMLKDMGGSSIKFFPMG----GLKHLEELKAVAKACARNGF-----TL----EPTGGIDLDNFEEIVKICLDAG 202 (218)
T ss_dssp EHHHHHHHHHHTT--EEEE---T----TTTTHHHHHHHHHHHHHCT------EE----EEBSS--TTTHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHcCCCeeeEeecC----CcccHHHHHHHHHHHHHcCc-----ee----CCcCCcCHHHHHHHHHHHHHcC
Confidence 456665544 4566688999985 35678899888888888772 12 257777 68999999999998
Q ss_pred CEE
Q 048643 280 IWV 282 (506)
Q Consensus 280 ~~l 282 (506)
+..
T Consensus 203 v~~ 205 (218)
T PF07071_consen 203 VEK 205 (218)
T ss_dssp -S-
T ss_pred CCe
Confidence 754
No 399
>cd01455 vWA_F11C1-5a_type Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A
Probab=68.48 E-value=16 Score=33.49 Aligned_cols=52 Identities=10% Similarity=-0.038 Sum_probs=41.6
Q ss_pred HHHHHHHHHHH-h-cCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEee
Q 048643 234 DSLLTQINLDV-E-AGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVD 285 (506)
Q Consensus 234 ~~L~~~i~~~~-~-~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVD 285 (506)
++|..+++.-. + ....-++|++|=|.+..|.++|++.-+++++++|+.+|+=
T Consensus 95 dAi~~av~rl~~~~~a~~kvvILLTDG~n~~~~i~P~~aAa~lA~~~gV~iytI 148 (191)
T cd01455 95 EATEFAIKELAAKEDFDEAIVIVLSDANLERYGIQPKKLADALAREPNVNAFVI 148 (191)
T ss_pred HHHHHHHHHHHhcCcCCCcEEEEEeCCCcCCCCCChHHHHHHHHHhCCCEEEEE
Confidence 88888887654 2 2223467888999999999999998899999999999863
No 400
>COG1066 Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=66.00 E-value=65 Score=33.19 Aligned_cols=89 Identities=21% Similarity=0.302 Sum_probs=59.5
Q ss_pred CeEEEeCCCCchH-HHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecc--------CCC
Q 048643 191 KLVVYGSDQTHCA-LQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIG--------TTA 261 (506)
Q Consensus 191 ~~~v~~s~~~H~s-~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~g--------tt~ 261 (506)
+.++|+|...-.. +.--|..+|+..+++...+ ..++|++.+.+++. +|.+||.-+- ++.
T Consensus 121 ~~vLYVsGEES~~QiklRA~RL~~~~~~l~l~a-------Et~~e~I~~~l~~~-----~p~lvVIDSIQT~~s~~~~Sa 188 (456)
T COG1066 121 GKVLYVSGEESLQQIKLRADRLGLPTNNLYLLA-------ETNLEDIIAELEQE-----KPDLVVIDSIQTLYSEEITSA 188 (456)
T ss_pred CcEEEEeCCcCHHHHHHHHHHhCCCccceEEeh-------hcCHHHHHHHHHhc-----CCCEEEEeccceeecccccCC
Confidence 3688988665543 4445678888666666554 46888988888773 3666665432 333
Q ss_pred CCcccCh----hHHHHHHHHhCCEE----Ee--ecccccc
Q 048643 262 ITAVDPL----KPLCDVAKQFGIWV----HV--DAAYAGS 291 (506)
Q Consensus 262 tG~idpl----~~I~~ia~~~g~~l----hV--DaA~gg~ 291 (506)
.|.+..+ .++.++|++.|+++ || ||+.+|.
T Consensus 189 pGsVsQVRe~t~~L~~~AK~~~i~~fiVGHVTKeG~IAGP 228 (456)
T COG1066 189 PGSVSQVREVAAELMRLAKTKNIAIFIVGHVTKEGAIAGP 228 (456)
T ss_pred CCcHHHHHHHHHHHHHHHHHcCCeEEEEEEEcccccccCc
Confidence 4776555 46677899999887 55 6777665
No 401
>cd01994 Alpha_ANH_like_IV This is a subfamily of Adenine nucleotide alpha hydrolases superfamily.Adeninosine nucleotide alpha hydrolases superfamily includes N type ATP PPases and ATP sulphurylases. It forms a apha/beta/apha fold which binds to Adenosine group. This subfamily of proteins is predicted to bind ATP. This domainhas a strongly conserved motif SGGKD at the N terminus.
Probab=65.64 E-value=1.1e+02 Score=28.04 Aligned_cols=103 Identities=15% Similarity=0.135 Sum_probs=57.5
Q ss_pred EEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEe-CCC---------CchHHHHHHHHhCCCCCCeEEEecCCCCC
Q 048643 159 GVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYG-SDQ---------THCALQKAAQIVGIDLKNFRAIKTTKSSS 228 (506)
Q Consensus 159 g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~-s~~---------~H~s~~ka~~~~G~g~~~v~~v~~~~~~~ 228 (506)
.+..|||..+.+.+..+.+. |.+ ...++.. +.. .+..+.+.|+.+|+ .++.++++.+.
T Consensus 3 ~v~~SGGkDS~~al~~a~~~------G~~--v~~l~~~~~~~~~~~~~h~~~~e~~~~~A~~lgi---pl~~i~~~~~~- 70 (194)
T cd01994 3 VALISGGKDSCYALYRALEE------GHE--VVALLNLTPEEGSSMMYHTVNHELLELQAEAMGI---PLIRIEISGEE- 70 (194)
T ss_pred EEEecCCHHHHHHHHHHHHc------CCE--EEEEEEEecCCCCcccccccCHHHHHHHHHHcCC---cEEEEeCCCCc-
Confidence 46778999999766554432 111 0111111 111 12345677888999 88888764311
Q ss_pred cccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC---hhHHHHHHHHhCCEEE
Q 048643 229 YGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP---LKPLCDVAKQFGIWVH 283 (506)
Q Consensus 229 ~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp---l~~I~~ia~~~g~~lh 283 (506)
.--.+.|.+++++..++|.. .+ .+|.++. -..+-.+|++.|+..+
T Consensus 71 -e~~~~~l~~~l~~~~~~g~~-~v--------v~G~i~sd~~~~~~e~~~~~~gl~~~ 118 (194)
T cd01994 71 -EDEVEDLKELLRKLKEEGVD-AV--------VFGAILSEYQRTRVERVCERLGLEPL 118 (194)
T ss_pred -hHHHHHHHHHHHHHHHcCCC-EE--------EECccccHHHHHHHHHHHHHcCCEEE
Confidence 22236777777765544321 11 2455532 4667779999998764
No 402
>TIGR03679 arCOG00187 arCOG00187 universal archaeal metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein. This model has the same scope as an archaeal COG (arCOG00187) and is found in all completely sequenced archaea and does not recognize any known non-archaeal genes.
Probab=65.55 E-value=93 Score=29.11 Aligned_cols=68 Identities=15% Similarity=0.136 Sum_probs=40.9
Q ss_pred hHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc---cChhHHHHHHHHh
Q 048643 202 CALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV---DPLKPLCDVAKQF 278 (506)
Q Consensus 202 ~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i---dpl~~I~~ia~~~ 278 (506)
....+.|+.+|+ .++.++++.. -....+.|.+++.+..+.|.. .+ . +|.+ ++-..+-.+|.+.
T Consensus 46 ~~~~~~A~~lgi---p~~~i~~~~~--~~~~~~~l~~~l~~~~~~g~~-~v---v-----~G~i~sd~~~~~~e~v~~~~ 111 (218)
T TIGR03679 46 ELTRLQAEALGI---PLVKIETSGE--KEKEVEDLKGALKELKREGVE-GI---V-----TGAIASRYQKSRIERICEEL 111 (218)
T ss_pred HHHHHHHHHhCC---CEEEEECCCC--ChHHHHHHHHHHHHHHHcCCC-EE---E-----ECCcccHhHHHHHHHHHHhC
Confidence 456677888999 8888887521 133455677777776555422 11 1 2333 2345556788777
Q ss_pred CCEEE
Q 048643 279 GIWVH 283 (506)
Q Consensus 279 g~~lh 283 (506)
|+.++
T Consensus 112 gl~~~ 116 (218)
T TIGR03679 112 GLKVF 116 (218)
T ss_pred CCeEE
Confidence 77654
No 403
>COG2515 Acd 1-aminocyclopropane-1-carboxylate deaminase [Amino acid transport and metabolism]
Probab=62.89 E-value=55 Score=32.14 Aligned_cols=116 Identities=17% Similarity=0.133 Sum_probs=65.2
Q ss_pred cEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCC-ch---HHHHHHHHhCCCCCCeEEEecCCCCCcccCH
Q 048643 158 GGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQT-HC---ALQKAAQIVGIDLKNFRAIKTTKSSSYGLSP 233 (506)
Q Consensus 158 ~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~-H~---s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~ 233 (506)
..++|-||.++|..-..+|-.+++ |+ +.+.++-... .| -..--...+|. .++.++... +..++.
T Consensus 65 dTlvT~GgiQSNh~r~tAavA~~l---Gl----~~v~ile~~~~~y~~ngn~Ll~~l~G~---~~~~~~~~~--d~~~~~ 132 (323)
T COG2515 65 DTLVTYGGIQSNHVRQTAAVAAKL---GL----KCVLILENIEANYLLNGNLLLSKLMGA---EVRAVDAGT--DIGINA 132 (323)
T ss_pred cEEEEecccchhHHHHHHHHHHhc---CC----cEEEEEeccccccccccchhhhhhcCc---eEEEecCCC--Chhhch
Confidence 568999999999877666554422 22 2333333222 00 02223356788 888887543 332222
Q ss_pred HHHHHHHHHHHhcCCccEEEEEeccCCCCCcc---cChhHHHHHHHH-hCCEEEeecc
Q 048643 234 DSLLTQINLDVEAGLVPLFLCATIGTTAITAV---DPLKPLCDVAKQ-FGIWVHVDAA 287 (506)
Q Consensus 234 ~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i---dpl~~I~~ia~~-~g~~lhVDaA 287 (506)
.++...++.+++|.+|+ |+...|.++.|.. .=..||.+-|++ ..+-.+|.++
T Consensus 133 -~~~~~~e~~~~~g~kpy-vIp~GG~~~~g~lGyv~~a~Ei~~Q~~~~~~fD~vVva~ 188 (323)
T COG2515 133 -SAEELAEEVRKQGGKPY-VIPEGGSSPLGALGYVRLALEIAEQAEQLLKFDSVVVAP 188 (323)
T ss_pred -hhHHHHHHHHhcCCCCc-EeccCCcCccccccHHHHHHHHHHHHhhccCCCEEEEeC
Confidence 33444445556788896 5555668885554 555667766666 3443445544
No 404
>PF01972 SDH_sah: Serine dehydrogenase proteinase; InterPro: IPR002825 This family of archaebacterial proteins, formerly known as DUF114, has been found to be a serine dehydrogenase proteinase distantly related to ClpP proteinases that belong to the serine proteinase superfamily. The family belong to MEROPS peptidase family S49; they are mostly unassigned peptidases but include the archaean signal peptide peptidase 1 []. The family has a catalytic triad of Ser, Asp, His residues, which shows an altered residue ordering compared with the ClpP proteinases but similar to that of the carboxypeptidase clan []. ; GO: 0016021 integral to membrane
Probab=62.57 E-value=51 Score=31.89 Aligned_cols=74 Identities=18% Similarity=0.133 Sum_probs=48.0
Q ss_pred CHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCE--EEe-ecccccccccCccchhhhcCCCCC
Q 048643 232 SPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIW--VHV-DAAYAGSACICPEFQHFIDGVEGA 308 (506)
Q Consensus 232 d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~--lhV-DaA~gg~~~~~~~~~~~~~gi~~a 308 (506)
|.+.+.++|+...++ .++.++. .|+-|.++--.+|+.+.+++... ++| +-|.+++.+.+- .|
T Consensus 76 dse~v~raI~~~~~~--~~IdLii---~TpGG~v~AA~~I~~~l~~~~~~v~v~VP~~A~SAGTlIAL----------aA 140 (285)
T PF01972_consen 76 DSEFVLRAIREAPKD--KPIDLII---HTPGGLVDAAEQIARALREHPAKVTVIVPHYAMSAGTLIAL----------AA 140 (285)
T ss_pred hHHHHHHHHHhcCCC--CceEEEE---ECCCCcHHHHHHHHHHHHhCCCCEEEEECcccccHHHHHHH----------hC
Confidence 334444555443222 3444443 57889999999999999998543 333 556666654431 68
Q ss_pred CeeEEcCccccC
Q 048643 309 DSFSLNAHKWFF 320 (506)
Q Consensus 309 Dsi~~~~hK~l~ 320 (506)
|-+.+++|--++
T Consensus 141 DeIvM~p~a~LG 152 (285)
T PF01972_consen 141 DEIVMGPGAVLG 152 (285)
T ss_pred CeEEECCCCccC
Confidence 999999988777
No 405
>cd00950 DHDPS Dihydrodipicolinate synthase (DHDPS) is a key enzyme in lysine biosynthesis. It catalyzes the aldol condensation of L-aspartate-beta- semialdehyde and pyruvate to dihydropicolinic acid via a Schiff base formation between pyruvate and a lysine residue. The functional enzyme is a homotetramer consisting of a dimer of dimers. DHDPS is member of dihydrodipicolinate synthase family that comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways.
Probab=62.46 E-value=15 Score=35.89 Aligned_cols=52 Identities=17% Similarity=0.281 Sum_probs=43.6
Q ss_pred CCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHh
Q 048643 227 SSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQF 278 (506)
Q Consensus 227 ~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~ 278 (506)
.++.+|.+.+++.++...+.|...+++..+.|....-+.+...++.+++.++
T Consensus 14 ~dg~iD~~~~~~~i~~l~~~Gv~gl~v~GstGE~~~lt~~Er~~l~~~~~~~ 65 (284)
T cd00950 14 DDGSVDFDALERLIEFQIENGTDGLVVCGTTGESPTLSDEEHEAVIEAVVEA 65 (284)
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEECCCCcchhhCCHHHHHHHHHHHHHH
Confidence 4679999999999999888888887788888877777778888888877765
No 406
>cd00951 KDGDH 5-dehydro-4-deoxyglucarate dehydratase, also called 5-keto-4-deoxy-glucarate dehydratase (KDGDH), which is member of dihydrodipicolinate synthase (DHDPS) family that comprises several pyruvate-dependent class I aldolases. The enzyme is involved in glucarate metabolism, and its mechanism presumbly involves a Schiff-base intermediate similar to members of DHDPS family. While in the case of Pseudomonas sp. 5-dehydro-4-deoxy-D-glucarate is degraded by KDGDH to 2,5-dioxopentanoate, in certain species of Enterobacteriaceae it is degraded instead to pyruvate and glycerate.
Probab=61.65 E-value=25 Score=34.58 Aligned_cols=58 Identities=14% Similarity=0.114 Sum_probs=44.2
Q ss_pred CCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHh---CCEEEe
Q 048643 227 SSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQF---GIWVHV 284 (506)
Q Consensus 227 ~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~---g~~lhV 284 (506)
.++++|.+.+++.++...+.|-.-+++..+.|....=+.+.-.++.+.+.+. ++++++
T Consensus 14 ~dg~iD~~~l~~l~~~l~~~Gv~gi~v~GstGE~~~Ls~eEr~~l~~~~~~~~~~~~pvi~ 74 (289)
T cd00951 14 ADGSFDEDAYRAHVEWLLSYGAAALFAAGGTGEFFSLTPDEYAQVVRAAVEETAGRVPVLA 74 (289)
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEECcCCcCcccCCHHHHHHHHHHHHHHhCCCCCEEE
Confidence 3579999999999999888887777777777777777777777777766654 355554
No 407
>PRK04147 N-acetylneuraminate lyase; Provisional
Probab=60.84 E-value=12 Score=36.90 Aligned_cols=59 Identities=14% Similarity=0.262 Sum_probs=45.4
Q ss_pred EEecCCCCCcccCHHHHHHHHHHHHh-cCCccEEEEEeccCCCCCcccChhHHHHHHHHh
Q 048643 220 AIKTTKSSSYGLSPDSLLTQINLDVE-AGLVPLFLCATIGTTAITAVDPLKPLCDVAKQF 278 (506)
Q Consensus 220 ~v~~~~~~~~~~d~~~L~~~i~~~~~-~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~ 278 (506)
.+++.-+.++++|.+.+++.++...+ .|-.-+++..+.|....=+.+.-.++.+.+.++
T Consensus 10 a~~TPf~~dg~iD~~~~~~li~~l~~~~Gv~gi~v~GstGE~~~Ls~eEr~~~~~~~~~~ 69 (293)
T PRK04147 10 ALLTPFDEDGQIDEQGLRRLVRFNIEKQGIDGLYVGGSTGEAFLLSTEEKKQVLEIVAEE 69 (293)
T ss_pred eeECcCCCCCCcCHHHHHHHHHHHHhcCCCCEEEECCCccccccCCHHHHHHHHHHHHHH
Confidence 33333334679999999999999988 887777788888877777778888888777664
No 408
>COG0329 DapA Dihydrodipicolinate synthase/N-acetylneuraminate lyase [Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane]
Probab=58.78 E-value=17 Score=36.00 Aligned_cols=57 Identities=14% Similarity=0.186 Sum_probs=48.9
Q ss_pred CcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHh---CCEEEe
Q 048643 228 SYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQF---GIWVHV 284 (506)
Q Consensus 228 ~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~---g~~lhV 284 (506)
+|.+|.+++++.++...++|-.-++++.|.|..++=+.++-.++.+.+.+. .+.+++
T Consensus 19 dg~vD~~a~~~lv~~li~~Gv~gi~~~GttGE~~~Ls~eEr~~v~~~~v~~~~grvpvia 78 (299)
T COG0329 19 DGSVDEEALRRLVEFLIAAGVDGLVVLGTTGESPTLTLEERKEVLEAVVEAVGGRVPVIA 78 (299)
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECCCCccchhcCHHHHHHHHHHHHHHHCCCCcEEE
Confidence 479999999999999999997778899999999999999999999998875 255544
No 409
>PRK03170 dihydrodipicolinate synthase; Provisional
Probab=58.73 E-value=20 Score=35.23 Aligned_cols=52 Identities=12% Similarity=0.107 Sum_probs=42.4
Q ss_pred CCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHh
Q 048643 227 SSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQF 278 (506)
Q Consensus 227 ~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~ 278 (506)
.++.+|.+.+++.++...+.|...+++..+.|....=+.+.-.++.+++.++
T Consensus 15 ~dg~iD~~~l~~~i~~l~~~Gv~gi~~~Gs~GE~~~ls~~Er~~~~~~~~~~ 66 (292)
T PRK03170 15 EDGSVDFAALRKLVDYLIANGTDGLVVVGTTGESPTLTHEEHEELIRAVVEA 66 (292)
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEECCcCCccccCCHHHHHHHHHHHHHH
Confidence 4679999999999999888888887788787777777778877887766664
No 410
>PRK03620 5-dehydro-4-deoxyglucarate dehydratase; Provisional
Probab=57.37 E-value=26 Score=34.69 Aligned_cols=58 Identities=12% Similarity=0.077 Sum_probs=44.1
Q ss_pred CCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHh---CCEEEe
Q 048643 227 SSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQF---GIWVHV 284 (506)
Q Consensus 227 ~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~---g~~lhV 284 (506)
+++++|.+.|++.++...++|-.-+++..+.|...+=+.+.-.++.+.+.+. ++.+++
T Consensus 21 ~dg~iD~~~l~~li~~l~~~Gv~Gi~~~GstGE~~~Lt~eEr~~~~~~~~~~~~~~~pvi~ 81 (303)
T PRK03620 21 ADGSFDEAAYREHLEWLAPYGAAALFAAGGTGEFFSLTPDEYSQVVRAAVETTAGRVPVIA 81 (303)
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEECcCCcCcccCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 4679999999999998888887777777777777777777777777766553 355544
No 411
>smart00642 Aamy Alpha-amylase domain.
Probab=54.46 E-value=29 Score=30.97 Aligned_cols=29 Identities=28% Similarity=0.358 Sum_probs=25.6
Q ss_pred CCCCcccChhHHHHHHHHhCCEEEeeccc
Q 048643 260 TAITAVDPLKPLCDVAKQFGIWVHVDAAY 288 (506)
Q Consensus 260 t~tG~idpl~~I~~ia~~~g~~lhVDaA~ 288 (506)
...|..++++++++-||++|+.+++|-+.
T Consensus 64 ~~~Gt~~d~~~lv~~~h~~Gi~vilD~V~ 92 (166)
T smart00642 64 PRFGTMEDFKELVDAAHARGIKVILDVVI 92 (166)
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEECC
Confidence 35688899999999999999999999764
No 412
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=54.05 E-value=39 Score=30.40 Aligned_cols=70 Identities=16% Similarity=0.293 Sum_probs=45.4
Q ss_pred CCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChh
Q 048643 190 SKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLK 269 (506)
Q Consensus 190 ~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~ 269 (506)
++..++......+.......++|+ ++...+.+ +.++++..+.+..+.|.. +|+...
T Consensus 78 ~~Iavv~~~~~~~~~~~~~~ll~~---~i~~~~~~-------~~~e~~~~i~~~~~~G~~--viVGg~------------ 133 (176)
T PF06506_consen 78 PKIAVVGYPNIIPGLESIEELLGV---DIKIYPYD-------SEEEIEAAIKQAKAEGVD--VIVGGG------------ 133 (176)
T ss_dssp SEEEEEEESS-SCCHHHHHHHHT----EEEEEEES-------SHHHHHHHHHHHHHTT----EEEESH------------
T ss_pred CcEEEEecccccHHHHHHHHHhCC---ceEEEEEC-------CHHHHHHHHHHHHHcCCc--EEECCH------------
Confidence 344444444444568888899999 99999875 577888889888777722 233321
Q ss_pred HHHHHHHHhCCEEE
Q 048643 270 PLCDVAKQFGIWVH 283 (506)
Q Consensus 270 ~I~~ia~~~g~~lh 283 (506)
-+.++|+++|+..+
T Consensus 134 ~~~~~A~~~gl~~v 147 (176)
T PF06506_consen 134 VVCRLARKLGLPGV 147 (176)
T ss_dssp HHHHHHHHTTSEEE
T ss_pred HHHHHHHHcCCcEE
Confidence 23788999998654
No 413
>TIGR03249 KdgD 5-dehydro-4-deoxyglucarate dehydratase. 5-dehydro-4-deoxyglucarate dehydratase not only catalyzes the dehydration of the substrate (diol to ketone + water), but causes the decarboxylation of the intermediate product to yield 2-oxoglutarate semialdehyde (2,5-dioxopentanoate). The gene for the enzyme is usually observed in the vicinity of transporters and dehydratases handling D-galactarate and D-gluconate as well as aldehyde dehydrogenases which convert the product to alpha-ketoglutarate.
Probab=54.04 E-value=28 Score=34.33 Aligned_cols=52 Identities=13% Similarity=0.133 Sum_probs=42.7
Q ss_pred CCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHh
Q 048643 227 SSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQF 278 (506)
Q Consensus 227 ~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~ 278 (506)
.++++|.+.+++.++...+.|-.-+++..+.|....-+.+.-.++.+.+.+.
T Consensus 19 ~dg~iD~~~l~~li~~l~~~Gv~gi~v~GstGE~~~Lt~eEr~~v~~~~~~~ 70 (296)
T TIGR03249 19 ADGSFDEAAYRENIEWLLGYGLEALFAAGGTGEFFSLTPAEYEQVVEIAVST 70 (296)
T ss_pred CCCCcCHHHHHHHHHHHHhcCCCEEEECCCCcCcccCCHHHHHHHHHHHHHH
Confidence 3579999999999999888887777777888888877778888888876664
No 414
>PLN02417 dihydrodipicolinate synthase
Probab=53.57 E-value=28 Score=34.04 Aligned_cols=52 Identities=15% Similarity=0.165 Sum_probs=42.1
Q ss_pred CCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHh
Q 048643 227 SSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQF 278 (506)
Q Consensus 227 ~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~ 278 (506)
.++.+|.+.+++.++...+.|-.-+++..+.|...+=+.+.-.++.+.+.+.
T Consensus 15 ~~g~iD~~~~~~~i~~l~~~Gv~Gi~~~GstGE~~~ls~~Er~~~~~~~~~~ 66 (280)
T PLN02417 15 PDGRFDLEAYDSLVNMQIENGAEGLIVGGTTGEGQLMSWDEHIMLIGHTVNC 66 (280)
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEECccCcchhhCCHHHHHHHHHHHHHH
Confidence 3579999999999999888887777788888887777778888887776654
No 415
>PF00701 DHDPS: Dihydrodipicolinate synthetase family; InterPro: IPR002220 Dihydropicolinate synthase (DHDPS) is the key enzyme in lysine biosynthesis via the diaminopimelate pathway of prokaryotes, some phycomycetes and higher plants. The enzyme catalyses the condensation of L-aspartate-beta- semialdehyde and pyruvate to dihydropicolinic acid via a ping-pong mechanism in which pyruvate binds to the enzyme by forming a Schiff-base with a lysine residue []. Three other proteins are structurally related to DHDPS and probably also act via a similar catalytic mechanism. These are Escherichia coli N-acetylneuraminate lyase (4.1.3.3 from EC) (gene nanA), which catalyzes the condensation of N-acetyl-D-mannosamine and pyruvate to form N-acetylneuraminate; Rhizobium meliloti (Sinorhizobium meliloti) protein mosA [], which is involved in the biosynthesis of the rhizopine 3-o-methyl-scyllo-inosamine; and E. coli hypothetical protein yjhH. The sequences of DHDPS from different sources are well-conserved. The structure takes the form of a homotetramer, in which 2 monomers are related by an approximate 2-fold symmetry []. Each monomer comprises 2 domains: an 8-fold alpha-/beta-barrel, and a C-terminal alpha-helical domain. The fold resembles that of N-acetylneuraminate lyase. The active site lysine is located in the barrel domain, and has access via 2 channels on the C-terminal side of the barrel.; GO: 0016829 lyase activity, 0008152 metabolic process; PDB: 3B4U_B 3S8H_A 3QZE_B 1XXX_F 3L21_F 3IRD_A 3A5F_B 3G0S_B 3DAQ_C 3UQN_A ....
Probab=53.29 E-value=23 Score=34.76 Aligned_cols=58 Identities=19% Similarity=0.195 Sum_probs=42.2
Q ss_pred CCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHh---CCEEEe
Q 048643 227 SSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQF---GIWVHV 284 (506)
Q Consensus 227 ~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~---g~~lhV 284 (506)
.++.+|.+.+++.++...+.|..-+++..+.|....=+.+.-.+|.+++.++ ++.+++
T Consensus 15 ~dg~id~~~~~~~i~~l~~~Gv~gl~~~GstGE~~~Lt~~Er~~l~~~~~~~~~~~~~vi~ 75 (289)
T PF00701_consen 15 ADGSIDEDALKRLIDFLIEAGVDGLVVLGSTGEFYSLTDEERKELLEIVVEAAAGRVPVIA 75 (289)
T ss_dssp TTSSB-HHHHHHHHHHHHHTTSSEEEESSTTTTGGGS-HHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CCcCcCHHHHHHHHHHHHHcCCCEEEECCCCcccccCCHHHHHHHHHHHHHHccCceEEEe
Confidence 3579999999999998888887777777777777776777778888877663 455554
No 416
>cd00408 DHDPS-like Dihydrodipicolinate synthase family. A member of the class I aldolases, which use an active-site lysine which stablilzes a reaction intermediate via Schiff base formation, and have TIM beta/alpha barrel fold. The dihydrodipicolinate synthase family comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways and includes such proteins as N-acetylneuraminate lyase, MosA protein, 5-keto-4-deoxy-glucarate dehydratase, trans-o-hydroxybenzylidenepyruvate hydratase-aldolase, trans-2'-carboxybenzalpyruvate hydratase-aldolase, and 2-keto-3-deoxy- gluconate aldolase. The family is also referred to as the N-acetylneuraminate lyase (NAL) family.
Probab=52.96 E-value=22 Score=34.66 Aligned_cols=57 Identities=18% Similarity=0.173 Sum_probs=42.8
Q ss_pred EEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHh
Q 048643 220 AIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQF 278 (506)
Q Consensus 220 ~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~ 278 (506)
..|.++ ++.+|.+.+++.++...+.|-.-+++..+.|....=..+.-.++.+.+.++
T Consensus 6 ~TPf~~--dg~iD~~~~~~~i~~l~~~Gv~gi~~~GstGE~~~ls~~Er~~l~~~~~~~ 62 (281)
T cd00408 6 VTPFTA--DGEVDLDALRRLVEFLIEAGVDGLVVLGTTGEAPTLTDEERKEVIEAVVEA 62 (281)
T ss_pred eCCcCC--CCCcCHHHHHHHHHHHHHcCCCEEEECCCCcccccCCHHHHHHHHHHHHHH
Confidence 345554 579999999999999888887766777777766666667777777776654
No 417
>TIGR03573 WbuX N-acetyl sugar amidotransferase. This enzyme has been implicated in the formation of the acetamido moiety (sugar-NC(=NH)CH3) which is found on some exopolysaccharides and is positively charged at neutral pH. The reaction involves ligation of ammonia with a sugar N-acetyl group, displacing water. In E. coli (O145 strain) and Pseudomonas aeruginosa (O12 strain) this gene is known as wbuX and ifnA respectively and likely acts on sialic acid. In Campylobacter jejuni, the gene is known as pseA and acts on pseudaminic acid in the process of flagellin glycosylation. In other Pseudomonas strains and various organisms it is unclear what the identity of the sugar substrate is, and in fact, the phylogenetic tree of this family sports a considerably deep branching suggestive of possible major differences in substrate structure. Nevertheless, the family is characterized by a conserved tetracysteine motif (CxxC.....[GN]xCxxC) possibly indicative of a metal binding site, as well as an
Probab=52.61 E-value=2.6e+02 Score=28.17 Aligned_cols=104 Identities=11% Similarity=0.039 Sum_probs=57.9
Q ss_pred cEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCC-----chHHHHHHHHhCCCCCCeEEEecCCCCCcccC
Q 048643 158 GGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQT-----HCALQKAAQIVGIDLKNFRAIKTTKSSSYGLS 232 (506)
Q Consensus 158 ~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~-----H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d 232 (506)
..+-.|||-.+..++..+.... |.....|-++..- ..-+.+.++.+|+ ....+.++
T Consensus 62 ~iV~lSGGkDSs~la~ll~~~~--------gl~~l~vt~~~~~~~e~~~~n~~~~~~~lgv---d~~~i~~d-------- 122 (343)
T TIGR03573 62 CIIGVSGGKDSTYQAHVLKKKL--------GLNPLLVTVDPGWNTELGVKNLNNLIKKLGF---DLHTITIN-------- 122 (343)
T ss_pred EEEECCCCHHHHHHHHHHHHHh--------CCceEEEEECCCCCCHHHHHHHHHHHHHcCC---CeEEEeCC--------
Confidence 5788899988887653333221 1122223333211 1135666777888 77777654
Q ss_pred HHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecccc
Q 048643 233 PDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYA 289 (506)
Q Consensus 233 ~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~g 289 (506)
++.+.+...........|.. .+..-....+.++|+++|+.+++.|..+
T Consensus 123 ~~~~~~l~~~~~~~~~~pc~---------~c~~~~~~~l~~~A~~~gi~~Il~G~~~ 170 (343)
T TIGR03573 123 PETFRKLQRAYFKKVGDPEW---------PQDHAIFASVYQVALKFNIPLIIWGENI 170 (343)
T ss_pred HHHHHHHHHHHHhccCCCch---------hhhhHHHHHHHHHHHHhCCCEEEeCCCH
Confidence 34444444433322222321 1122335688899999999999988553
No 418
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=52.38 E-value=98 Score=30.70 Aligned_cols=92 Identities=14% Similarity=0.009 Sum_probs=57.4
Q ss_pred EEEeCCCCchHHHHHHHHhCCCCCCeEEEecCC----------CC----------CcccCHHHHHHHHHHHHhcCCccEE
Q 048643 193 VVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTK----------SS----------SYGLSPDSLLTQINLDVEAGLVPLF 252 (506)
Q Consensus 193 ~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~----------~~----------~~~~d~~~L~~~i~~~~~~g~~p~~ 252 (506)
.=+.....+.-+....+-.|+ ....+++.. ++ .-.++.+++++.++.-.+. ....-
T Consensus 56 ~GflGg~tg~~~~~~l~~~gi---~~~fv~v~g~TRinvki~~~~~~~~Tein~~Gp~is~~~~~~~l~~~~~~-l~~~d 131 (310)
T COG1105 56 LGFLGGFTGEFFVALLKDEGI---PDAFVEVKGDTRINVKILDEEDGEETEINFPGPEISEAELEQFLEQLKAL-LESDD 131 (310)
T ss_pred EEecCCccHHHHHHHHHhcCC---CceEEEccCCCeeeEEEEecCCCcEEEecCCCCCCCHHHHHHHHHHHHHh-cccCC
Confidence 345666666667777777777 333332211 00 1256666666665543321 11223
Q ss_pred EEEeccCCCCCcc-cChhHHHHHHHHhCCEEEeeccc
Q 048643 253 LCATIGTTAITAV-DPLKPLCDVAKQFGIWVHVDAAY 288 (506)
Q Consensus 253 Vv~t~gtt~tG~i-dpl~~I~~ia~~~g~~lhVDaA~ 288 (506)
+|+-+|+-+.|.- |...+|.++|++.|..+.+|..-
T Consensus 132 ~VvlsGSlP~g~~~d~y~~li~~~~~~g~~vilD~Sg 168 (310)
T COG1105 132 IVVLSGSLPPGVPPDAYAELIRILRQQGAKVILDTSG 168 (310)
T ss_pred EEEEeCCCCCCCCHHHHHHHHHHHHhcCCeEEEECCh
Confidence 5667788888765 66899999999999999999753
No 419
>TIGR00674 dapA dihydrodipicolinate synthase. Dihydrodipicolinate synthase is a homotetrameric enzyme of lysine biosynthesis. E. coli has several paralogs closely related to dihydrodipicoline synthase (DapA), as well as the more distant N-acetylneuraminate lyase. In Pyrococcus horikoshii, the bidirectional best hit with E. coli is to an uncharacterized paralog of DapA, not DapA itself, and it is omitted from the seed. The putative members from the Chlamydias (pathogens with a parasitic metabolism) are easily the most divergent members of the multiple alignment.
Probab=52.27 E-value=24 Score=34.54 Aligned_cols=58 Identities=12% Similarity=0.170 Sum_probs=45.3
Q ss_pred EEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHh
Q 048643 219 RAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQF 278 (506)
Q Consensus 219 ~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~ 278 (506)
...|.++ +|++|.+.+++.++...+.|-..+++..+.|....=..+.-.++.+.+.+.
T Consensus 6 ~~TPf~~--~g~iD~~~~~~~i~~l~~~Gv~Gi~~~GstGE~~~Ls~~Er~~~~~~~~~~ 63 (285)
T TIGR00674 6 LITPFKE--DGSVDFAALEKLIDFQIENGTDAIVVVGTTGESPTLSHEEHKKVIEFVVDL 63 (285)
T ss_pred eeCCcCC--CCCcCHHHHHHHHHHHHHcCCCEEEECccCcccccCCHHHHHHHHHHHHHH
Confidence 3445554 579999999999999888888887777788877777778888888876664
No 420
>TIGR02313 HpaI-NOT-DapA 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase. This model represents a subset of the DapA (dihydrodipicolinate synthase) family which has apparently evolved a separate function. The product of DapA, dihydrodipicolinate, results from the non-enzymatic cyclization and dehydration of 6-amino-2,4-dihydroxyhept-2-ene-1,7-dioic acid, which is different from the substrate of this reaction only in the presence of the amino group. In the absence of this amino group, and running the reaction in the opposite direction, the reaction corresponds to the HpaI aldolase component of the 4-hydroxyphenylacetic acid catabolism pathway (see TIGR02311). At present, this variant of DapA is found only in Oceanobacillus iheyensis HTE831 and Thermus thermophilus HB27. In both of these cases, one or more other DapA genes can be found and the one identified by this model is part of an operon for 4-hydroxyphenylacetic acid catabolism.
Probab=51.87 E-value=32 Score=33.87 Aligned_cols=55 Identities=15% Similarity=0.170 Sum_probs=43.7
Q ss_pred EecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHH
Q 048643 221 IKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQ 277 (506)
Q Consensus 221 v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~ 277 (506)
.|.+ ++|++|.+.+++.++...++|-.-+++..+.|....=+.+.-.++.+.+.+
T Consensus 10 TPf~--~dg~iD~~~l~~lv~~~~~~Gv~gi~v~GstGE~~~Ls~~Er~~l~~~~~~ 64 (294)
T TIGR02313 10 TPFK--RNGDIDEEALRELIEFQIEGGSHAISVGGTSGEPGSLTLEERKQAIENAID 64 (294)
T ss_pred CCcC--CCCCcCHHHHHHHHHHHHHcCCCEEEECccCcccccCCHHHHHHHHHHHHH
Confidence 3444 467999999999999998888777778888887777777888888876654
No 421
>COG0108 RibB 3,4-dihydroxy-2-butanone 4-phosphate synthase [Coenzyme metabolism]
Probab=51.07 E-value=39 Score=31.03 Aligned_cols=49 Identities=24% Similarity=0.208 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEE
Q 048643 234 DSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVH 283 (506)
Q Consensus 234 ~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lh 283 (506)
-+=|..++-.+-+|..|..|++-.-+ ..|..-..+++.++|++||+.++
T Consensus 141 GHTEasVdLarlAGl~Pa~VicEi~~-~dG~mar~~~~~~fa~~h~l~~i 189 (203)
T COG0108 141 GHTEAAVDLARLAGLKPAGVICEIMN-DDGTMARLPELEEFAKEHGLPVI 189 (203)
T ss_pred ChHHHHHHHHHHcCCCCcEEEEEEeC-CCccccChHHHHHHHHHcCCcEE
Confidence 35566777777789999877776643 48999999999999999999885
No 422
>KOG0630 consensus Predicted pyridoxal-dependent decarboxylase [Amino acid transport and metabolism]
Probab=49.16 E-value=86 Score=32.88 Aligned_cols=63 Identities=16% Similarity=0.360 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHHHHHHhcCcEEE-eeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHccC
Q 048643 437 EEAINEFNRELLESINASGKAYM-THAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAFLTTN 502 (506)
Q Consensus 437 ~~~~~~~~~~l~~~l~~~g~~~~-~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l~~~~ 502 (506)
..+++.+|-.|.+.|....-+|- +-.+-.|..++||... +.+.|++.+++.+...++++...+
T Consensus 636 KqeinhLNidLVeaLKStDaAFS~Gd~Tr~Gl~CVkFGMl---sd~kdleeLldlVaqkGKeieenq 699 (838)
T KOG0630|consen 636 KQEINHLNIDLVEALKSTDAAFSLGDCTRDGLICVKFGML---SDEKDLEELLDLVAQKGKEIEENQ 699 (838)
T ss_pred HHHHhhccHHHHHHHhhhhhhcccCCccccceeEEEeccc---cchhhHHHHHHHHHHhchhhhhHH
Confidence 34556677788888766554443 3334467889999764 477899999998887777765543
No 423
>TIGR01275 ACC_deam_rel pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family. This model represents a family of pyridoxal phosphate-dependent enzymes closely related to (and often designated as putative examples of) 1-aminocyclopropane-1-carboxylate deaminase. It appears that members of this family include both D-cysteine desulfhydrase (EC 4.4.1.15) and 1-aminocyclopropane-1-carboxylate deaminase (EC 3.5.99.7).
Probab=48.84 E-value=87 Score=30.96 Aligned_cols=56 Identities=16% Similarity=0.123 Sum_probs=31.8
Q ss_pred cEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCch-HHHHHHHHhCCCCCCeEEEec
Q 048643 158 GGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHC-ALQKAAQIVGIDLKNFRAIKT 223 (506)
Q Consensus 158 ~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~-s~~ka~~~~G~g~~~v~~v~~ 223 (506)
..+++.|||.+|...-.++-.+.+ | -+.+|+++..... ......+.+|. +|+.++-
T Consensus 57 ~~vv~~g~ssGN~g~alA~~a~~~---G----~~~~ivvp~~~~~~~~~~~~~~~Ga---~v~~v~~ 113 (311)
T TIGR01275 57 DTVITVGAIQSNHARATALAAKKL---G----LDAVLVLREKEELNGNLLLDKLMGA---ETRVYSA 113 (311)
T ss_pred CEEEEcCCchhHHHHHHHHHHHHh---C----CceEEEecCCccCCCCHHHHHHcCC---EEEEECc
Confidence 357787777777643222212111 1 3567888864322 23444688999 8988874
No 424
>TIGR00683 nanA N-acetylneuraminate lyase. N-acetylneuraminate lyase is also known as N-acetylneuraminic acid aldolase, sialic acid aldolase, or sialate lyase. It is an intracellular enzyme. The structure of this homotetrameric enzyme related to dihydrodipicolinate synthase is known. In Clostridium tertium, the enzyme appears to be in an operon with a secreted sialidase that releases sialic acid from host sialoglycoconjugates. In several E. coli strains, however, this enzyme is responsible for N-acetyl-D-neuraminic acid synthesis for capsule production by condensing N-acetyl-D-mannosamine and pyruvate.
Probab=48.71 E-value=38 Score=33.28 Aligned_cols=52 Identities=13% Similarity=0.200 Sum_probs=39.9
Q ss_pred CCcccCHHHHHHHHHHHHhcC-CccEEEEEeccCCCCCcccChhHHHHHHHHh
Q 048643 227 SSYGLSPDSLLTQINLDVEAG-LVPLFLCATIGTTAITAVDPLKPLCDVAKQF 278 (506)
Q Consensus 227 ~~~~~d~~~L~~~i~~~~~~g-~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~ 278 (506)
+++++|.+.+++.++...+.| -.-+++..+.|....=..+.-.++.+.+.+.
T Consensus 14 ~dg~iD~~~~~~~i~~~i~~G~v~gi~~~GstGE~~~Lt~eEr~~~~~~~~~~ 66 (290)
T TIGR00683 14 EDGTINEKGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDE 66 (290)
T ss_pred CCCCcCHHHHHHHHHHHHhCCCcCEEEECCcccccccCCHHHHHHHHHHHHHH
Confidence 467999999999999888888 6666677777776666667777777766654
No 425
>PRK10638 glutaredoxin 3; Provisional
Probab=48.36 E-value=1e+02 Score=23.52 Aligned_cols=68 Identities=15% Similarity=0.193 Sum_probs=39.9
Q ss_pred CeEEEeCCCCchH--HHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccCh
Q 048643 191 KLVVYGSDQTHCA--LQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPL 268 (506)
Q Consensus 191 ~~~v~~s~~~H~s--~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl 268 (506)
+.++|....+.+| +.+.+...|+ ....++++.+ .+ ..+.+.+.......|.+++ +....|-.|++
T Consensus 3 ~v~ly~~~~Cp~C~~a~~~L~~~gi---~y~~~dv~~~------~~-~~~~l~~~~g~~~vP~i~~---~g~~igG~~~~ 69 (83)
T PRK10638 3 NVEIYTKATCPFCHRAKALLNSKGV---SFQEIPIDGD------AA-KREEMIKRSGRTTVPQIFI---DAQHIGGCDDL 69 (83)
T ss_pred cEEEEECCCChhHHHHHHHHHHcCC---CcEEEECCCC------HH-HHHHHHHHhCCCCcCEEEE---CCEEEeCHHHH
Confidence 5678887777765 4456677788 7788887632 22 2334444444455676533 23455666666
Q ss_pred hHH
Q 048643 269 KPL 271 (506)
Q Consensus 269 ~~I 271 (506)
.++
T Consensus 70 ~~~ 72 (83)
T PRK10638 70 YAL 72 (83)
T ss_pred HHH
Confidence 554
No 426
>cd00952 CHBPH_aldolase Trans-o-hydroxybenzylidenepyruvate hydratase-aldolase (HBPHA) and trans-2'-carboxybenzalpyruvate hydratase-aldolase (CBPHA). HBPHA catalyzes HBP to salicyaldehyde and pyruvate. This reaction is part of the degradative pathways for naphthalene and naphthalenesulfonates by bacteria. CBPHA is homologous to HBPHA and catalyzes the cleavage of CBP to 2-carboxylbenzaldehyde and pyruvate during the degradation of phenanthrene. They are member of the DHDPS family of Schiff-base-dependent class I aldolases.
Probab=47.66 E-value=46 Score=33.06 Aligned_cols=51 Identities=12% Similarity=0.120 Sum_probs=43.1
Q ss_pred CcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHh
Q 048643 228 SYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQF 278 (506)
Q Consensus 228 ~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~ 278 (506)
+|++|.+.|++.++...+.|-.-++|..+.|....=+.+.-.++.+.+.+.
T Consensus 23 ~g~iD~~~l~~lv~~li~~Gv~Gi~v~GstGE~~~Lt~eEr~~v~~~~~~~ 73 (309)
T cd00952 23 TDTVDLDETARLVERLIAAGVDGILTMGTFGECATLTWEEKQAFVATVVET 73 (309)
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECcccccchhCCHHHHHHHHHHHHHH
Confidence 479999999999999988887777888888888888888888888877654
No 427
>cd00954 NAL N-Acetylneuraminic acid aldolase, also called N-acetylneuraminate lyase (NAL), which catalyses the reversible aldol reaction of N-acetyl-D-mannosamine and pyruvate to give N-acetyl-D-neuraminic acid (D-sialic acid). It has a widespread application as biocatalyst for the synthesis of sialic acid and its derivatives. This enzyme has been shown to be quite specific for pyruvate as the donor, but flexible to a variety of D- and, to some extent, L-hexoses and pentoses as acceptor substrates. NAL is member of dihydrodipicolinate synthase family that comprises several pyruvate-dependent class I aldolases.
Probab=47.45 E-value=37 Score=33.25 Aligned_cols=58 Identities=14% Similarity=0.256 Sum_probs=43.5
Q ss_pred CCcccCHHHHHHHHHHHHhc-CCccEEEEEeccCCCCCcccChhHHHHHHHHh---CCEEEe
Q 048643 227 SSYGLSPDSLLTQINLDVEA-GLVPLFLCATIGTTAITAVDPLKPLCDVAKQF---GIWVHV 284 (506)
Q Consensus 227 ~~~~~d~~~L~~~i~~~~~~-g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~---g~~lhV 284 (506)
.++.+|.+.+++.++...+. |-.-+++..+.|....=..+.-.++.+.+.++ ++.+++
T Consensus 14 ~dg~iD~~~~~~~i~~l~~~~Gv~gi~~~GstGE~~~Lt~~Er~~~~~~~~~~~~~~~~via 75 (288)
T cd00954 14 ENGEINEDVLRAIVDYLIEKQGVDGLYVNGSTGEGFLLSVEERKQIAEIVAEAAKGKVTLIA 75 (288)
T ss_pred CCCCCCHHHHHHHHHHHHhcCCCCEEEECcCCcCcccCCHHHHHHHHHHHHHHhCCCCeEEe
Confidence 35799999999999998888 87777777777777766667777777766654 345544
No 428
>COG0367 AsnB Asparagine synthase (glutamine-hydrolyzing) [Amino acid transport and metabolism]
Probab=46.67 E-value=1.9e+02 Score=31.28 Aligned_cols=127 Identities=20% Similarity=0.166 Sum_probs=74.2
Q ss_pred hhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeE-EEeCCCCch-----
Q 048643 129 AATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLV-VYGSDQTHC----- 202 (506)
Q Consensus 129 ~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~-v~~s~~~H~----- 202 (506)
....+...+.+-+.+.+-.+.. .|++.|||-.+.+.|-.+++..- .... .|.-...+.
T Consensus 211 ~~~~l~~~l~~sV~~r~~advp-------vg~~lSGGlDSS~Iaa~a~~~~~---------~~~~~~fsvg~~~~~~~D~ 274 (542)
T COG0367 211 LAEHLRSLLEDAVKRRLVADVP-------VGVFLSGGLDSSLIAAIAAEELG---------KEGKTTFTVGFEDSDSPDA 274 (542)
T ss_pred HHHHHHHHHHHHHHHHhccCCc-------EEEEeCCCccHHHHHHHHHHhcc---------ccceeeeEeecCCCCCchH
Confidence 3445555555555555533333 78999999888777766665431 1111 022222222
Q ss_pred -HHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCE
Q 048643 203 -ALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIW 281 (506)
Q Consensus 203 -s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~ 281 (506)
-..++|..+|. ..+.+.+ ..+++.+++.+... ..-.....+...|+=-+++.+++++.+
T Consensus 275 ~~a~~~A~~lg~---~h~~~~~--------~~~e~~~~~~~vv~---------~~~~p~~~~~~~ply~~~~~a~~~g~k 334 (542)
T COG0367 275 KYARAVAKFLGT---PHHEIIL--------TNEELLNALPEVVK---------ALDTPGGMAASIPLYLLSRKARAEGEK 334 (542)
T ss_pred HHHHHHHHHhCC---CcEEEee--------cHHHHHHHHHHHHh---------hcCCCCcccchhHHHHHHHhhhhcCcE
Confidence 24567778888 5555543 45566666655332 222222266778899999999999988
Q ss_pred EEe-----ecccccc
Q 048643 282 VHV-----DAAYAGS 291 (506)
Q Consensus 282 lhV-----DaA~gg~ 291 (506)
+.. |.-+||.
T Consensus 335 VvLSGeGADElFgGY 349 (542)
T COG0367 335 VVLSGEGADELFGGY 349 (542)
T ss_pred EeecCccHHHHhcCC
Confidence 877 4467776
No 429
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=45.54 E-value=1.9e+02 Score=27.82 Aligned_cols=84 Identities=8% Similarity=0.059 Sum_probs=54.6
Q ss_pred CchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCc----ccChhHHHHHH
Q 048643 200 THCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITA----VDPLKPLCDVA 275 (506)
Q Consensus 200 ~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~----idpl~~I~~ia 275 (506)
.++.+.+++.-.| +.+.+... -..++++++.+++.-.+.|..- ++++--|++.+.. .-++..|..+.
T Consensus 110 ~n~~LL~~va~tg----kPVilk~G----~~~t~~e~~~A~e~i~~~Gn~~-i~L~eRg~~~Y~~~~~n~~dl~ai~~lk 180 (250)
T PRK13397 110 QNFEFLKTLSHID----KPILFKRG----LMATIEEYLGALSYLQDTGKSN-IILCERGVRGYDVETRNMLDIMAVPIIQ 180 (250)
T ss_pred cCHHHHHHHHccC----CeEEEeCC----CCCCHHHHHHHHHHHHHcCCCe-EEEEccccCCCCCccccccCHHHHHHHH
Confidence 4566666655444 45666532 1679999999998877766533 2332214333322 45688888888
Q ss_pred HHhCCEEEeeccccccc
Q 048643 276 KQFGIWVHVDAAYAGSA 292 (506)
Q Consensus 276 ~~~g~~lhVDaA~gg~~ 292 (506)
++.++.+++|.+|.++.
T Consensus 181 ~~~~lPVivd~SHs~G~ 197 (250)
T PRK13397 181 QKTDLPIIVDVSHSTGR 197 (250)
T ss_pred HHhCCCeEECCCCCCcc
Confidence 88999999999997663
No 430
>COG3453 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=45.21 E-value=75 Score=26.66 Aligned_cols=73 Identities=15% Similarity=0.239 Sum_probs=46.7
Q ss_pred CCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHH---HHHHHHHHhcCCccEEEEEeccCCCCCc---c-----c
Q 048643 198 DQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSL---LTQINLDVEAGLVPLFLCATIGTTAITA---V-----D 266 (506)
Q Consensus 198 ~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L---~~~i~~~~~~g~~p~~Vv~t~gtt~tG~---i-----d 266 (506)
.+..-++..+++.+|+ ....||+.. +.+..+++ .+++.+. ..|.+..+-.|+-.+-. . -
T Consensus 44 QP~~~~i~~aa~~aGl---~y~~iPV~~---~~iT~~dV~~f~~Al~ea----egPVlayCrsGtRs~~ly~~~~~~~gm 113 (130)
T COG3453 44 QPGFAAIAAAAEAAGL---TYTHIPVTG---GGITEADVEAFQRALDEA----EGPVLAYCRSGTRSLNLYGLGELDGGM 113 (130)
T ss_pred CCChHHHHHHHHhcCC---ceEEeecCC---CCCCHHHHHHHHHHHHHh----CCCEEeeecCCchHHHHHHHHHHhcCC
Confidence 4456688899999999 899999973 35555554 4444443 34877777666544311 1 2
Q ss_pred ChhHHHHHHHHhCC
Q 048643 267 PLKPLCDVAKQFGI 280 (506)
Q Consensus 267 pl~~I~~ia~~~g~ 280 (506)
+.++|.++.+++|+
T Consensus 114 ~~de~~a~g~a~G~ 127 (130)
T COG3453 114 SRDEIEALGQAAGF 127 (130)
T ss_pred CHHHHHHHHHhhCc
Confidence 45667777776664
No 431
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=45.19 E-value=1.4e+02 Score=30.65 Aligned_cols=67 Identities=15% Similarity=0.134 Sum_probs=38.0
Q ss_pred cEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHH
Q 048643 158 GGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLL 237 (506)
Q Consensus 158 ~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~ 237 (506)
..++-++|.-+.-.|-.+|++ ....|++-+-+-.+..++....+- ++..+.+| ..|.++|.
T Consensus 3 ~ilviGaG~Vg~~va~~la~~-----------~d~~V~iAdRs~~~~~~i~~~~~~---~v~~~~vD-----~~d~~al~ 63 (389)
T COG1748 3 KILVIGAGGVGSVVAHKLAQN-----------GDGEVTIADRSKEKCARIAELIGG---KVEALQVD-----AADVDALV 63 (389)
T ss_pred cEEEECCchhHHHHHHHHHhC-----------CCceEEEEeCCHHHHHHHHhhccc---cceeEEec-----ccChHHHH
Confidence 356666666666566555554 213344433333344444333333 66666666 45889999
Q ss_pred HHHHHH
Q 048643 238 TQINLD 243 (506)
Q Consensus 238 ~~i~~~ 243 (506)
++|++.
T Consensus 64 ~li~~~ 69 (389)
T COG1748 64 ALIKDF 69 (389)
T ss_pred HHHhcC
Confidence 999875
No 432
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=44.93 E-value=55 Score=33.46 Aligned_cols=96 Identities=19% Similarity=0.285 Sum_probs=57.7
Q ss_pred eCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcc-cCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHH
Q 048643 196 GSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYG-LSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDV 274 (506)
Q Consensus 196 ~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~-~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~i 274 (506)
+....|..+.|. +++. ..+++.+++..+ .+. .+.+.|-+.++...++ .-.||++ -..-|.+.+.+++.++
T Consensus 96 ~~~~~r~T~~K~-Rv~s-~nQQllRvD~Ee--~~~~~~~~~ll~~~~~~l~~---~~~vVLS--DY~KG~L~~~q~~I~~ 166 (467)
T COG2870 96 LRDKNRPTIVKL-RVLS-RNQQLLRLDFEE--KFPIEDENKLLEKIKNALKS---FDALVLS--DYAKGVLTNVQKMIDL 166 (467)
T ss_pred EeecCCCceeee-eeec-ccceEEEecccc--cCcchhHHHHHHHHHHHhhc---CCEEEEe--ccccccchhHHHHHHH
Confidence 344566666654 2222 223666666543 222 3445555555554332 1134443 3457999999999999
Q ss_pred HHHhCCEEEeec------ccccccccCccchh
Q 048643 275 AKQFGIWVHVDA------AYAGSACICPEFQH 300 (506)
Q Consensus 275 a~~~g~~lhVDa------A~gg~~~~~~~~~~ 300 (506)
|++.|..+.||- =|.|..++.|...+
T Consensus 167 ar~~~~pVLvDPKg~Df~~Y~GAtLiTPN~~E 198 (467)
T COG2870 167 AREAGIPVLVDPKGKDFEKYRGATLITPNLKE 198 (467)
T ss_pred HHHcCCcEEECCCCcchhhhCCCeecCCCHHH
Confidence 999999999994 46666666665443
No 433
>TIGR01536 asn_synth_AEB asparagine synthase (glutamine-hydrolyzing). This model describes the glutamine-hydrolysing asparagine synthase. A poorly conserved C-terminal extension was removed from the model. Bacterial members of the family tend to have a long, poorly conserved insert lacking from archaeal and eukaryotic sequences. Multiple isozymes have been demonstrated, such as in Bacillus subtilis. Long-branch members of the phylogenetic tree (which typically were also second or third candidate members from their genomes) were removed from the seed alignment and score below trusted cutoff.
Probab=44.79 E-value=3.5e+02 Score=28.47 Aligned_cols=122 Identities=18% Similarity=0.164 Sum_probs=65.2
Q ss_pred hHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEE---eC-CCCch---
Q 048643 130 ATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVY---GS-DQTHC--- 202 (506)
Q Consensus 130 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~---~s-~~~H~--- 202 (506)
..+++..+.+-+.+.+.-+.. -|++.|||-.+.+.+..+++.. . + .+...| .+ .....
T Consensus 235 ~e~l~~~l~~aV~~r~~~~~~-------vg~~LSGGlDSs~iaa~a~~~~--~----~--~~~~~~t~~~~~~~~~~E~~ 299 (467)
T TIGR01536 235 VDELRSLLEDAVKRRLVADVP-------VGVLLSGGLDSSLVAAIARREA--P----R--GPVHTFSIGFEGSPDFDESP 299 (467)
T ss_pred HHHHHHHHHHHHHHHhccCCc-------eEEEecCChhHHHHHHHHHHhc--C----C--CCceEEEEecCCCCCCChHH
Confidence 345666666666655543332 6788899988877665554331 0 0 122222 22 11112
Q ss_pred HHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEE
Q 048643 203 ALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWV 282 (506)
Q Consensus 203 s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~l 282 (506)
...+.|+.+|+ +...+.+++ +.+.+.+.+.......|+ .....-++-.+.+.++++|+-+
T Consensus 300 ~A~~vA~~lg~---~~~~i~~~~--------~~~~~~~~~~v~~~~~p~---------~~~~~~~~~~l~~~a~~~G~~v 359 (467)
T TIGR01536 300 YARKVADHLGT---EHHEVLFSV--------EEGLDALPEVIYHLEDPT---------TIRASIPLYLLSKLAREDGVKV 359 (467)
T ss_pred HHHHHHHHhCC---cCeEEECCH--------HHHHHHHHHHHHhhCCCC---------CCchHHHHHHHHHHHHhcCCEE
Confidence 45677888999 777776643 223223332221111232 1122235567888899999888
Q ss_pred Eeec
Q 048643 283 HVDA 286 (506)
Q Consensus 283 hVDa 286 (506)
+.+|
T Consensus 360 lltG 363 (467)
T TIGR01536 360 VLSG 363 (467)
T ss_pred EEec
Confidence 8766
No 434
>PF00926 DHBP_synthase: 3,4-dihydroxy-2-butanone 4-phosphate synthase; InterPro: IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase (4.1.99.12 from EC) (DHBP synthase) (RibB) catalyses the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate, the latter serving as the biosynthetic precursor for the xylene ring of riboflavin []. In Photobacterium leiognathi, the riboflavin synthesis genes ribB (DHBP synthase), ribE (riboflavin synthase), ribH (lumazone synthase) and ribA (GTP cyclohydrolase II) all reside in the lux operon []. RibB is sometimes found as a bifunctional enzyme with GTP cyclohydrolase II that catalyses the first committed step in the biosynthesis of riboflavin (IPR000926 from INTERPRO). No sequences with significant homology to DHBP synthase are found in the metazoa.; GO: 0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity, 0009231 riboflavin biosynthetic process; PDB: 1K4O_A 1K4L_A 1K4P_A 1K49_A 1K4I_A 1TKU_A 1TKS_B 2RIS_A 2RIU_A 3MIO_A ....
Probab=44.26 E-value=56 Score=30.02 Aligned_cols=50 Identities=20% Similarity=0.191 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEE
Q 048643 233 PDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVH 283 (506)
Q Consensus 233 ~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lh 283 (506)
..+=|.+++=..-.|..|..|++..-+ ..|..-+.+++.++|++||+.++
T Consensus 136 ~GhtEaavdLa~lAGl~p~avi~eil~-~dG~~~~~~~~~~fA~~~~l~~v 185 (194)
T PF00926_consen 136 RGHTEAAVDLARLAGLSPVAVICEILD-DDGDMARRDELEEFAKKHGLPIV 185 (194)
T ss_dssp SSHHHHHHHHHHHTTS-SBEEEEEBBE-TTSSBHCHHHHHHHHHHTT-EEE
T ss_pred CChHHHHHHHHHHhCCCCcEEEEEEeC-CCCCcCCHHHHHHHHHHcCCcEE
Confidence 345677777777789999888887764 48999999999999999999885
No 435
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=43.91 E-value=1.8e+02 Score=26.04 Aligned_cols=69 Identities=7% Similarity=-0.004 Sum_probs=36.4
Q ss_pred CeEEEeCCCC--ch---HHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc
Q 048643 191 KLVVYGSDQT--HC---ALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV 265 (506)
Q Consensus 191 ~~~v~~s~~~--H~---s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i 265 (506)
.-+|+++... .. ...+..+..|. +|..+.+| --|.+++++++....+...+...|+-.+|....+.+
T Consensus 26 ~~~il~~r~~~~~~~~~~~i~~l~~~g~---~v~~~~~D-----v~d~~~v~~~~~~~~~~~~~i~gVih~ag~~~~~~~ 97 (181)
T PF08659_consen 26 RRLILLGRSGAPSAEAEAAIRELESAGA---RVEYVQCD-----VTDPEAVAAALAQLRQRFGPIDGVIHAAGVLADAPI 97 (181)
T ss_dssp SEEEEEESSGGGSTTHHHHHHHHHHTT----EEEEEE-------TTSHHHHHHHHHTSHTTSS-EEEEEE-------B-G
T ss_pred CEEEEeccCCCccHHHHHHHHHHHhCCC---ceeeeccC-----ccCHHHHHHHHHHHHhccCCcceeeeeeeeeccccc
Confidence 4456666662 22 23344455577 89999987 458999999998876655333456666776666666
Q ss_pred cC
Q 048643 266 DP 267 (506)
Q Consensus 266 dp 267 (506)
.+
T Consensus 98 ~~ 99 (181)
T PF08659_consen 98 QD 99 (181)
T ss_dssp CC
T ss_pred cc
Confidence 54
No 436
>PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed
Probab=42.72 E-value=1.9e+02 Score=29.41 Aligned_cols=60 Identities=8% Similarity=0.034 Sum_probs=43.0
Q ss_pred cCHHHHHHHHHHHHhcCCccEEEEEeccCCCCC---cc-cChhHHHHHHHHhCCEEEeecccccc
Q 048643 231 LSPDSLLTQINLDVEAGLVPLFLCATIGTTAIT---AV-DPLKPLCDVAKQFGIWVHVDAAYAGS 291 (506)
Q Consensus 231 ~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG---~i-dpl~~I~~ia~~~g~~lhVDaA~gg~ 291 (506)
.+++.++.+++.-...|... ++++-.|++.+. .- -++..|..+-+++++.+.+|..|.++
T Consensus 236 ~t~~e~~~Ave~i~~~Gn~~-i~L~erg~s~yp~~~~~~ldl~~i~~lk~~~~~PV~~d~~Hs~G 299 (360)
T PRK12595 236 ATIEEFIYAAEYIMSQGNGQ-IILCERGIRTYEKATRNTLDISAVPILKQETHLPVMVDVTHSTG 299 (360)
T ss_pred CCHHHHHHHHHHHHHCCCCC-EEEECCccCCCCCCCCCCcCHHHHHHHHHHhCCCEEEeCCCCCc
Confidence 69999999998887777544 333332444322 11 37899999988899999999999765
No 437
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=42.46 E-value=3.3e+02 Score=26.42 Aligned_cols=78 Identities=14% Similarity=0.055 Sum_probs=49.6
Q ss_pred CCeEEEeCCCCchHHHHHHH---HhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCccc
Q 048643 190 SKLVVYGSDQTHCALQKAAQ---IVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVD 266 (506)
Q Consensus 190 ~~~~v~~s~~~H~s~~ka~~---~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~id 266 (506)
+..+|++......-..-+.+ ..|+ ++..+|+|-. |++++++..++...++...-++|-++|....|.+.
T Consensus 30 g~~liLvaR~~~kL~~la~~l~~~~~v---~v~vi~~DLs-----~~~~~~~l~~~l~~~~~~IdvLVNNAG~g~~g~f~ 101 (265)
T COG0300 30 GYNLILVARREDKLEALAKELEDKTGV---EVEVIPADLS-----DPEALERLEDELKERGGPIDVLVNNAGFGTFGPFL 101 (265)
T ss_pred CCEEEEEeCcHHHHHHHHHHHHHhhCc---eEEEEECcCC-----ChhHHHHHHHHHHhcCCcccEEEECCCcCCccchh
Confidence 45678888766533222222 2356 8888998843 56677776666555555566788899988888663
Q ss_pred --ChhHHHHHH
Q 048643 267 --PLKPLCDVA 275 (506)
Q Consensus 267 --pl~~I~~ia 275 (506)
+++++.+..
T Consensus 102 ~~~~~~~~~mi 112 (265)
T COG0300 102 ELSLDEEEEMI 112 (265)
T ss_pred hCChHHHHHHH
Confidence 455555443
No 438
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=42.34 E-value=19 Score=39.20 Aligned_cols=37 Identities=27% Similarity=0.161 Sum_probs=32.7
Q ss_pred EEEeccCCCCCcccChhHHHHHHHHhCCEEEeecccc
Q 048643 253 LCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYA 289 (506)
Q Consensus 253 Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~g 289 (506)
+-.=++++..|.-++++++++-||++|+-+++|-+++
T Consensus 201 ~g~yAp~sryGtPedfk~fVD~aH~~GIgViLD~V~~ 237 (628)
T COG0296 201 TGYYAPTSRYGTPEDFKALVDAAHQAGIGVILDWVPN 237 (628)
T ss_pred ceeccccccCCCHHHHHHHHHHHHHcCCEEEEEecCC
Confidence 4455678899999999999999999999999998874
No 439
>cd00953 KDG_aldolase KDG (2-keto-3-deoxygluconate) aldolases found in archaea. This subfamily of enzymes is adapted for high thermostability and shows specificity for non-phosphorylated substrates. The enzyme catalyses the reversible aldol cleavage of 2-keto-3-dexoygluconate to pyruvate and glyceraldehyde, the third step of a modified non-phosphorylated Entner-Doudoroff pathway of glucose oxidation. KDG aldolase shows no significant sequence similarity to microbial 2-keto-3-deoxyphosphogluconate (KDPG) aldolases, and the enzyme shows no activity with glyceraldehyde 3-phosphate as substrate. The enzyme is a tetramer and a member of the DHDPS family of Schiff-base-dependent class I aldolases.
Probab=41.69 E-value=52 Score=32.12 Aligned_cols=50 Identities=10% Similarity=0.122 Sum_probs=41.9
Q ss_pred cccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHh
Q 048643 229 YGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQF 278 (506)
Q Consensus 229 ~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~ 278 (506)
|.+|.+.+++.++...+.|-.-+++..+.|....=..+.-.++.+.+.+.
T Consensus 15 g~iD~~~~~~li~~l~~~Gv~Gl~~~GstGE~~~Lt~eEr~~l~~~~~~~ 64 (279)
T cd00953 15 NKIDKEKFKKHCENLISKGIDYVFVAGTTGLGPSLSFQEKLELLKAYSDI 64 (279)
T ss_pred CCcCHHHHHHHHHHHHHcCCcEEEEcccCCCcccCCHHHHHHHHHHHHHH
Confidence 69999999999999888887777888888888887878888888776654
No 440
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=41.32 E-value=2.3e+02 Score=27.34 Aligned_cols=82 Identities=16% Similarity=0.049 Sum_probs=56.1
Q ss_pred CchHHHHHHHHhCCCCCCeEEEecCCCCCccc-CHHHHHHHHHHHHhcCCccEEEEEeccCCCC-Cc---ccChhHHHHH
Q 048643 200 THCALQKAAQIVGIDLKNFRAIKTTKSSSYGL-SPDSLLTQINLDVEAGLVPLFLCATIGTTAI-TA---VDPLKPLCDV 274 (506)
Q Consensus 200 ~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~-d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~t-G~---idpl~~I~~i 274 (506)
.+..+.+.+.-.|. .+.+.. |.. +++.++.+++.....|..- ++++-.|++.+ +. .-++..|..+
T Consensus 120 ~n~~LL~~~a~~gk----PVilk~-----G~~~t~~e~~~Ave~i~~~Gn~~-i~l~~rG~s~y~~~~~~~~dl~~i~~l 189 (260)
T TIGR01361 120 QNFELLKEVGKQGK----PVLLKR-----GMGNTIEEWLYAAEYILSSGNGN-VILCERGIRTFEKATRNTLDLSAVPVL 189 (260)
T ss_pred cCHHHHHHHhcCCC----cEEEeC-----CCCCCHHHHHHHHHHHHHcCCCc-EEEEECCCCCCCCCCcCCcCHHHHHHH
Confidence 45556666554444 555653 344 8999999998887777543 34444455433 43 3578999999
Q ss_pred HHHhCCEEEeecccccc
Q 048643 275 AKQFGIWVHVDAAYAGS 291 (506)
Q Consensus 275 a~~~g~~lhVDaA~gg~ 291 (506)
.+++++.+.+|..|.++
T Consensus 190 k~~~~~pV~~ds~Hs~G 206 (260)
T TIGR01361 190 KKETHLPIIVDPSHAAG 206 (260)
T ss_pred HHhhCCCEEEcCCCCCC
Confidence 98899999999999766
No 441
>PF03162 Y_phosphatase2: Tyrosine phosphatase family; InterPro: IPR004861 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity. Consequently, maintaining an appropriate level of protein tyrosine phosphorylation is essential for many cellular functions. Tyrosine-specific protein phosphatases (PTPase; 3.1.3.48 from EC) catalyse the removal of a phosphate group attached to a tyrosine residue, using a cysteinyl-phosphate enzyme intermediate. These enzymes are key regulatory components in signal transduction pathways (such as the MAP kinase pathway) and cell cycle control, and are important in the control of cell growth, proliferation, differentiation and transformation [, ]. The PTP superfamily can be divided into four subfamilies []: (1) pTyr-specific phosphatases (2) dual specificity phosphatases (dTyr and dSer/dThr) (3) Cdc25 phosphatases (dTyr and/or dThr) (4) LMW (low molecular weight) phosphatases Based on their cellular localisation, PTPases are also classified as: Receptor-like, which are transmembrane receptors that contain PTPase domains [] Non-receptor (intracellular) PTPases [] All PTPases carry the highly conserved active site motif C(X)5R (PTP signature motif), employ a common catalytic mechanism, and share a similar core structure made of a central parallel beta-sheet with flanking alpha-helices containing a beta-loop-alpha-loop that encompasses the PTP signature motif []. Functional diversity between PTPases is endowed by regulatory domains and subunits. This entry represents protein-tyrosine phosphatases predominantly from fungi, plants and bacteria, several of which are putative enzymes. These proteins are closely related to the Y-phosphatase and DSPc families. This entry includes the PTPase SIW14 from Saccharomyces cerevisiae (Baker's yeast), which plays a role in actin filament organisation and endocytosis.; PDB: 2Q47_A 1XRI_A.
Probab=41.27 E-value=41 Score=30.00 Aligned_cols=82 Identities=12% Similarity=0.211 Sum_probs=42.1
Q ss_pred eEEEeCCC-CchHHHHHHHHhCCCCCCeEEEecCCCCC--cccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccCh
Q 048643 192 LVVYGSDQ-THCALQKAAQIVGIDLKNFRAIKTTKSSS--YGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPL 268 (506)
Q Consensus 192 ~~v~~s~~-~H~s~~ka~~~~G~g~~~v~~v~~~~~~~--~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl 268 (506)
.+|+.+.. ........++-.|+ +++.++...... ..+..+.+.++++--......|++|.+..|..-||.+
T Consensus 35 TII~L~~e~~~~~~~~f~~~~~I---~l~~~~~~~~~~~~~~~~~~~v~~aL~~ild~~n~PvLiHC~~G~~rTG~v--- 108 (164)
T PF03162_consen 35 TIINLRPEPPSQDFLEFAEENGI---KLIHIPMSSSKDPWVPISEEQVAEALEIILDPRNYPVLIHCNHGKDRTGLV--- 108 (164)
T ss_dssp EEEE--SS---HHHHHHHHHTT----EEEE-------GGG----HHHHHHHHHHHH-GGG-SEEEE-SSSSSHHHHH---
T ss_pred eEEEecCCCCCHHHHHHHhhcCc---eEEEeccccccCccccCCHHHHHHHHHHHhCCCCCCEEEEeCCCCcchhhH---
Confidence 44554443 44566667888899 899888864321 2467778888776433333469999999999999875
Q ss_pred hHHHHHHHHhCCEE
Q 048643 269 KPLCDVAKQFGIWV 282 (506)
Q Consensus 269 ~~I~~ia~~~g~~l 282 (506)
+..-|+..-|-
T Consensus 109 ---vg~lRk~Q~W~ 119 (164)
T PF03162_consen 109 ---VGCLRKLQGWS 119 (164)
T ss_dssp ---HHHHHHHTTB-
T ss_pred ---HHHHHHHcCCC
Confidence 34444544454
No 442
>PRK05872 short chain dehydrogenase; Provisional
Probab=41.23 E-value=2.8e+02 Score=26.89 Aligned_cols=59 Identities=14% Similarity=-0.033 Sum_probs=35.3
Q ss_pred hHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCccc
Q 048643 202 CALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVD 266 (506)
Q Consensus 202 ~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~id 266 (506)
....+.++.++- ..++..+++| --|.+.+++.+++..+....+-+||.++|....+.+.
T Consensus 44 ~~l~~~~~~l~~-~~~~~~~~~D-----v~d~~~v~~~~~~~~~~~g~id~vI~nAG~~~~~~~~ 102 (296)
T PRK05872 44 AELAALAAELGG-DDRVLTVVAD-----VTDLAAMQAAAEEAVERFGGIDVVVANAGIASGGSVA 102 (296)
T ss_pred HHHHHHHHHhcC-CCcEEEEEec-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCcCcc
Confidence 344455555543 2256676666 3478888888776544433455788888866555553
No 443
>TIGR03581 EF_0839 conserved hypothetical protein EF_0839/AHA_3917. Members of this family of relatively uncommon proteins are found in both Gram-positive (e.g. Enterococcus faecalis) and Gram-negative (e.g. Aeromonas hydrophila) bacteria, as part of a cluster of conserved proteins. The function is unknown.
Probab=41.20 E-value=1.1e+02 Score=28.47 Aligned_cols=70 Identities=7% Similarity=0.090 Sum_probs=51.0
Q ss_pred hHHHHHHHHh-CCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc--cChhHHHHHHHHh
Q 048643 202 CALQKAAQIV-GIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV--DPLKPLCDVAKQF 278 (506)
Q Consensus 202 ~s~~ka~~~~-G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i--dpl~~I~~ia~~~ 278 (506)
..++.+..++ .+|...+.+.|.. |.-.+|.|+..-+.+.++|.. + -+||-| |.+++|.++|.+.
T Consensus 135 V~vetAiaml~dmG~~SiKffPM~----Gl~~leE~~avA~aca~~g~~-----l----EPTGGIdl~Nf~~I~~i~lda 201 (236)
T TIGR03581 135 VPIETAIAMLKDMGGSSVKFFPMG----GLKHLEEYAAVAKACAKHGFY-----L----EPTGGIDLDNFEEIVQIALDA 201 (236)
T ss_pred eeHHHHHHHHHHcCCCeeeEeecC----CcccHHHHHHHHHHHHHcCCc-----c----CCCCCccHHhHHHHHHHHHHc
Confidence 3566666544 5666789999985 355778888877777777732 1 467877 5799999999999
Q ss_pred CCEEEe
Q 048643 279 GIWVHV 284 (506)
Q Consensus 279 g~~lhV 284 (506)
|+..++
T Consensus 202 Gv~kvi 207 (236)
T TIGR03581 202 GVEKVI 207 (236)
T ss_pred CCCeec
Confidence 876644
No 444
>TIGR00506 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase. Several members of the family are bifunctional, involving both ribA and ribB function. In these cases, ribA tends to be on the C-terminal end of the protein and ribB tends to be on the N-terminal.
Probab=40.25 E-value=74 Score=29.36 Aligned_cols=50 Identities=16% Similarity=0.109 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEE
Q 048643 233 PDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVH 283 (506)
Q Consensus 233 ~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lh 283 (506)
.-+=|.+++=.+-+|..|..|++..- +..|..-..+++.++|++||+.++
T Consensus 141 ~GhTEaavdL~~lAGl~p~~vicEil-~~dG~m~~~~~~~~fA~~~~l~~i 190 (199)
T TIGR00506 141 GGHTEASVDLAELAGLKPAGVICEMM-NDDGTMARKPELMEYAKKHNLKLI 190 (199)
T ss_pred CChHHHHHHHHHHcCCCceEEEEEEe-CCCCCccCHHHHHHHHHHcCCcEE
Confidence 33556777766778988987777763 457999999999999999999883
No 445
>TIGR01274 ACC_deam 1-aminocyclopropane-1-carboxylate deaminase. This pyridoxal phosphate-dependent enzyme degrades 1-aminocyclopropane-1-carboxylate, which in plants is a precursor of the ripening hormone ethylene, to ammonia and alpha-ketoglutarate. This model includes all members of this family for which function has been demonstrated experimentally, but excludes a closely related family often annotated as putative members of this family.
Probab=40.15 E-value=1.6e+02 Score=29.53 Aligned_cols=76 Identities=13% Similarity=0.031 Sum_probs=39.0
Q ss_pred cEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCC--c------hHHHHHHHHhCCCCCCeEEEecCCCCCc
Q 048643 158 GGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQT--H------CALQKAAQIVGIDLKNFRAIKTTKSSSY 229 (506)
Q Consensus 158 ~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~--H------~s~~ka~~~~G~g~~~v~~v~~~~~~~~ 229 (506)
..+++.||+.+|...-.++-.+. . | =+.+|+++... + ..-....+.+|. +|+.++.+.+.
T Consensus 67 ~~vvs~ggs~gN~g~alA~~a~~---~---G-l~~~iv~~~~~~~~~~~~~~~~~~~~~~~~GA---~v~~v~~~~~~-- 134 (337)
T TIGR01274 67 TTLVSIGGIQSNQTRQVAAVAAH---L---G-MKCVLVQENWVNYSDAVYDRVGNIQLSRIMGA---DVRLDPDGFDI-- 134 (337)
T ss_pred CEEEECCCCcchHHHHHHHHHHH---c---C-CcEEEEeccCCCccccchhccchHHHHHHcCC---EEEEeCCcccc--
Confidence 34667776666754333222211 1 1 23566776533 1 244556788999 99988854321
Q ss_pred ccCHHHHHHHHHHHHhc
Q 048643 230 GLSPDSLLTQINLDVEA 246 (506)
Q Consensus 230 ~~d~~~L~~~i~~~~~~ 246 (506)
. ..+.++++.+...+.
T Consensus 135 ~-~~~~~~~a~~~~~~~ 150 (337)
T TIGR01274 135 G-HRNSWERALEEVRGA 150 (337)
T ss_pred c-chHHHHHHHHHHHhc
Confidence 1 234444444444443
No 446
>TIGR00381 cdhD CO dehydrogenase/acetyl-CoA synthase, delta subunit. This is the small subunit of a heterodimer which catalyzes the reaction CO + H2O + Acceptor = CO2 + Reduced acceptor and is involved in the synthesis of acetyl-CoA from CO2 and H2.
Probab=39.21 E-value=1.6e+02 Score=30.12 Aligned_cols=64 Identities=19% Similarity=0.156 Sum_probs=42.0
Q ss_pred HHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCccc-ChhHHHHHHHHhCCEEEee
Q 048643 207 AAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVD-PLKPLCDVAKQFGIWVHVD 285 (506)
Q Consensus 207 a~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~id-pl~~I~~ia~~~g~~lhVD 285 (506)
.+...++ .++..-+. +-.-|++.|+++++.. .|.+|++-.+|. + ++++++++|++||..+.+=
T Consensus 183 V~~av~v---PLIL~gsg---~~~kD~eVLeaaLe~~--~G~kpLL~SAt~--------e~Ny~~ia~lAk~yg~~Vvv~ 246 (389)
T TIGR00381 183 VLQAVDV---PIVIGGSG---NPEKDPLVLEKAAEVA--EGERCLLASANL--------DLDYEKIANAAKKYGHVVLSW 246 (389)
T ss_pred HHHhCCC---CEEEeCCC---CCcCCHHHHHHHHHHh--CCCCcEEEecCc--------hhhHHHHHHHHHHhCCeEEEE
Confidence 3344455 45444332 2366899999998865 566676533322 3 8999999999999988764
Q ss_pred c
Q 048643 286 A 286 (506)
Q Consensus 286 a 286 (506)
+
T Consensus 247 s 247 (389)
T TIGR00381 247 T 247 (389)
T ss_pred c
Confidence 3
No 447
>TIGR02026 BchE magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase. This model respresents the cobalamin-dependent oxidative cyclase responsible for forming the distinctive E-ring of the chlorin ring system under anaerobic conditions. This step is essential in the biosynthesis of both bacteriochlorophyll and chlorophyll under anaerobic conditions (a separate enzyme, AcsF, acts under aerobic conditions). This model identifies two clades of sequences, one from photosynthetic, non-cyanobacterial bacteria and another including Synechocystis and several non-photosynthetic bacteria. The function of the Synechocystis gene is supported by gene clustering with other photosynthetic genes, so the purpose of the gene in the non-photosynthetic bacteria is uncertain. Note that homologs of this gene are not found in plants which rely solely on the aerobic cyclase.
Probab=38.92 E-value=1.4e+02 Score=31.83 Aligned_cols=63 Identities=10% Similarity=0.080 Sum_probs=44.4
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHh--CCEEEeeccccc
Q 048643 217 NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQF--GIWVHVDAAYAG 290 (506)
Q Consensus 217 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~--g~~lhVDaA~gg 290 (506)
+|..++... ..++.+++.+.|.+. .|-+|.+|+ .+..+....++++.+++. ++.+++=|.|..
T Consensus 39 ~V~iiD~~~---~~~~~~~~~~~l~~~-----~pdvVgis~---~t~~~~~a~~~~~~~k~~~P~~~iV~GG~h~t 103 (497)
T TIGR02026 39 DVTFLDAMT---GPLTDEKLVERLRAH-----CPDLVLITA---ITPAIYIACETLKFARERLPNAIIVLGGIHPT 103 (497)
T ss_pred ceEEecccc---cCCCHHHHHHHHHhc-----CcCEEEEec---CcccHHHHHHHHHHHHHHCCCCEEEEcCCCcC
Confidence 677777542 367888888887653 255666653 344667778899999987 899988777643
No 448
>TIGR02189 GlrX-like_plant Glutaredoxin-like family. This family of glutaredoxin-like proteins is aparrently limited to plants. Multiple isoforms are found in A. thaliana and O.sativa.
Probab=38.07 E-value=1.8e+02 Score=23.30 Aligned_cols=72 Identities=11% Similarity=0.126 Sum_probs=42.3
Q ss_pred CCeEEEeCCCCchHHH--HHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC
Q 048643 190 SKLVVYGSDQTHCALQ--KAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP 267 (506)
Q Consensus 190 ~~~~v~~s~~~H~s~~--ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp 267 (506)
.+.+||....+++|.. +...-.|+ ....+.++.+ .+...+.+.+.+.+.....|.+ ...| ...|-.|+
T Consensus 8 ~~Vvvysk~~Cp~C~~ak~~L~~~~i---~~~~vdid~~----~~~~~~~~~l~~~tg~~tvP~V--fi~g-~~iGG~dd 77 (99)
T TIGR02189 8 KAVVIFSRSSCCMCHVVKRLLLTLGV---NPAVHEIDKE----PAGKDIENALSRLGCSPAVPAV--FVGG-KLVGGLEN 77 (99)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCC---CCEEEEcCCC----ccHHHHHHHHHHhcCCCCcCeE--EECC-EEEcCHHH
Confidence 5677887777777643 44555677 6677777642 2344566666654433345654 2333 45677777
Q ss_pred hhHH
Q 048643 268 LKPL 271 (506)
Q Consensus 268 l~~I 271 (506)
+.++
T Consensus 78 l~~l 81 (99)
T TIGR02189 78 VMAL 81 (99)
T ss_pred HHHH
Confidence 6544
No 449
>PRK13396 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=37.84 E-value=2.3e+02 Score=28.66 Aligned_cols=83 Identities=12% Similarity=0.024 Sum_probs=54.5
Q ss_pred chHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccC-----CCCCcccChhHHHHHH
Q 048643 201 HCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGT-----TAITAVDPLKPLCDVA 275 (506)
Q Consensus 201 H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gt-----t~tG~idpl~~I~~ia 275 (506)
++.+.+.+.-.| +.+.+... -.++++.+..+++.-.+.|.. -++++-.|. +++-..-|+..|..+.
T Consensus 197 n~~LL~~va~t~----kPVllk~G----~~~t~ee~~~A~e~i~~~Gn~-~viL~erG~rtf~s~y~~~~~dl~ai~~lk 267 (352)
T PRK13396 197 NFSLLKKVGAQD----KPVLLKRG----MAATIDEWLMAAEYILAAGNP-NVILCERGIRTFDRQYTRNTLDLSVIPVLR 267 (352)
T ss_pred CHHHHHHHHccC----CeEEEeCC----CCCCHHHHHHHHHHHHHcCCC-eEEEEecCCccCcCCCCCCCcCHHHHHHHH
Confidence 345545443333 35555532 244899999998887766653 345555543 2233456799999998
Q ss_pred HHhCCEEEeeccccccc
Q 048643 276 KQFGIWVHVDAAYAGSA 292 (506)
Q Consensus 276 ~~~g~~lhVDaA~gg~~ 292 (506)
+.+++.+++|.+|+.+.
T Consensus 268 ~~~~lPVi~DpsH~~G~ 284 (352)
T PRK13396 268 SLTHLPIMIDPSHGTGK 284 (352)
T ss_pred HhhCCCEEECCcccCCc
Confidence 88899999999998753
No 450
>TIGR01244 conserved hypothetical protein TIGR01244. No member of this family is characterized. The member from Xylella fastidiosa is a longer protein with an N-terminal region described by this model, followed by a metallo-beta-lactamase family domain and an additional C-terminal region. Members scoring above the trusted cutoff are limited to the proteobacteria.
Probab=37.64 E-value=1.6e+02 Score=25.05 Aligned_cols=68 Identities=21% Similarity=0.266 Sum_probs=45.6
Q ss_pred HHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc---------cChhHHHHHH
Q 048643 205 QKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV---------DPLKPLCDVA 275 (506)
Q Consensus 205 ~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i---------dpl~~I~~ia 275 (506)
.+.+...|+ +.+.+|+.. +.++.+.++...+-- +....|+++-+.+|. -+|.+ -+.++|.+.+
T Consensus 50 ~~~a~~~gl---~y~~iPv~~---~~~~~~~v~~f~~~~-~~~~~pvL~HC~sG~-Rt~~l~al~~~~~g~~~~~i~~~~ 121 (135)
T TIGR01244 50 KAAAEAAGV---TYHHQPVTA---GDITPDDVETFRAAI-GAAEGPVLAYCRSGT-RSSLLWGFRQAAEGVPVEEIVRRA 121 (135)
T ss_pred HHHHHHCCC---eEEEeecCC---CCCCHHHHHHHHHHH-HhCCCCEEEEcCCCh-HHHHHHHHHHHHcCCCHHHHHHHH
Confidence 456677899 999999874 356655554332221 223468889998888 67764 3668888888
Q ss_pred HHhCC
Q 048643 276 KQFGI 280 (506)
Q Consensus 276 ~~~g~ 280 (506)
++.|.
T Consensus 122 ~~~G~ 126 (135)
T TIGR01244 122 QAAGY 126 (135)
T ss_pred HHcCC
Confidence 87764
No 451
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=37.50 E-value=1.7e+02 Score=27.19 Aligned_cols=76 Identities=17% Similarity=0.168 Sum_probs=45.6
Q ss_pred CeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhH
Q 048643 191 KLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKP 270 (506)
Q Consensus 191 ~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~ 270 (506)
+.++++-+. .....+.++..|+ .++..+.+ |.+.|.++++... .|+...+.+....++--..
T Consensus 24 ~V~~l~R~~-~~~~~~~l~~~g~---~vv~~d~~-------~~~~l~~al~g~d-------~v~~~~~~~~~~~~~~~~~ 85 (233)
T PF05368_consen 24 SVRALVRDP-SSDRAQQLQALGA---EVVEADYD-------DPESLVAALKGVD-------AVFSVTPPSHPSELEQQKN 85 (233)
T ss_dssp CEEEEESSS-HHHHHHHHHHTTT---EEEES-TT--------HHHHHHHHTTCS-------EEEEESSCSCCCHHHHHHH
T ss_pred CcEEEEecc-chhhhhhhhcccc---eEeecccC-------CHHHHHHHHcCCc-------eEEeecCcchhhhhhhhhh
Confidence 455555544 4344455566788 66544332 7899999987532 3444444443445566788
Q ss_pred HHHHHHHhCCEEEe
Q 048643 271 LCDVAKQFGIWVHV 284 (506)
Q Consensus 271 I~~ia~~~g~~lhV 284 (506)
|++.|++.|+-.+|
T Consensus 86 li~Aa~~agVk~~v 99 (233)
T PF05368_consen 86 LIDAAKAAGVKHFV 99 (233)
T ss_dssp HHHHHHHHT-SEEE
T ss_pred HHHhhhccccceEE
Confidence 99999999986665
No 452
>COG1954 GlpP Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]
Probab=37.04 E-value=36 Score=30.41 Aligned_cols=49 Identities=16% Similarity=0.258 Sum_probs=35.9
Q ss_pred CHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhC--CEEEeecccccc
Q 048643 232 SPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFG--IWVHVDAAYAGS 291 (506)
Q Consensus 232 d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g--~~lhVDaA~gg~ 291 (506)
|..+|+++++.+.+ +|+. -+|.+-.|+++.+..++.| +++|||=.-|..
T Consensus 12 ~~~~le~~les~~~------~vfl-----L~~~i~~ik~ivk~lK~~gK~vfiHvDLv~Gl~ 62 (181)
T COG1954 12 DNKDLEKALESESQ------YVFL-----LTGHILNIKEIVKKLKNRGKTVFIHVDLVEGLS 62 (181)
T ss_pred hHHHHHHHhcCCCe------EEEE-----EechhhhHHHHHHHHHhCCcEEEEEeHHhcccC
Confidence 56677888776543 3333 2578899999999999986 789999766543
No 453
>COG1184 GCD2 Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis]
Probab=37.03 E-value=2.8e+02 Score=27.36 Aligned_cols=100 Identities=19% Similarity=0.205 Sum_probs=64.0
Q ss_pred CcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCch-----HHHHHHHHhCCCCCCeEEEecCCCCCccc
Q 048643 157 GGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHC-----ALQKAAQIVGIDLKNFRAIKTTKSSSYGL 231 (506)
Q Consensus 157 ~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~-----s~~ka~~~~G~g~~~v~~v~~~~~~~~~~ 231 (506)
+..++|-+-|.+.+..|..|++.. ++..||+.+ +++ -..|..+-.|+ .+..|+ | .
T Consensus 120 g~~IlTh~~S~~v~~~l~~A~~~~---------k~~~V~VtE-SRP~~eG~~~ak~L~~~gI---~~~~I~-D--s---- 179 (301)
T COG1184 120 GDVILTHSFSKTVLEVLKTAADRG---------KRFKVIVTE-SRPRGEGRIMAKELRQSGI---PVTVIV-D--S---- 179 (301)
T ss_pred CCEEEEecCcHHHHHHHHHhhhcC---------CceEEEEEc-CCCcchHHHHHHHHHHcCC---ceEEEe-c--h----
Confidence 478999998888888888888752 446677653 333 24455566687 777776 2 1
Q ss_pred CHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc-cCh--hHHHHHHHHhCCEEEee
Q 048643 232 SPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV-DPL--KPLCDVAKQFGIWVHVD 285 (506)
Q Consensus 232 d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i-dpl--~~I~~ia~~~g~~lhVD 285 (506)
+....+++..+ +++...+-...|.+ +-+ -.|+..||+.+.++.|=
T Consensus 180 ---a~~~~~~~vd~------VivGad~I~~nG~lvnkiGT~~lA~~A~e~~~Pf~v~ 227 (301)
T COG1184 180 ---AVGAFMSRVDK------VLVGADAILANGALVNKIGTSPLALAARELRVPFYVV 227 (301)
T ss_pred ---HHHHHHHhCCE------EEECccceecCCcEEeccchHHHHHHHHHhCCCEEEE
Confidence 34444544322 55555555555444 443 57888899999999763
No 454
>PF10022 DUF2264: Uncharacterized protein conserved in bacteria (DUF2264); InterPro: IPR016624 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=36.05 E-value=2.5e+02 Score=28.58 Aligned_cols=125 Identities=15% Similarity=0.234 Sum_probs=73.4
Q ss_pred CHHHHHHHHHHHHHHHHHHHHhcCC---CCCCCC-----CChhHHhh----------hC----CCCCCCCCCCHHHHHHH
Q 048643 21 DPEEFRRQAHMVIDFIADYYKNVDK---YPVRSQ-----VEPGYLRK----------RL----PECAPYNPESMETILQD 78 (506)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~---~p~~~~-----~~p~~l~~----------~~----~~~~p~~~~~~~~il~~ 78 (506)
+++++.+++.++++-+..|+..-.. .|..+. ...+.|.. .+ +..-++.+....++.+.
T Consensus 2 tR~~w~~~~~~ll~p~~~~~s~~~~~~~~P~~~~a~~~~~~a~~LEgfaR~l~g~ap~l~~~~~~~~~~~~~~~~~~~~~ 81 (361)
T PF10022_consen 2 TRADWVEALDKLLEPLLPYLSPGGARIRMPGESGAHYDRKAADYLEGFARPLWGAAPWLAGGGEDDDTEEGKLREKLREL 81 (361)
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCcCCcCcchhHHHHHHHHHHHHHHHHHhcCCCcCcccccccHHHHHHH
Confidence 5678888899999999988865432 233322 11121221 01 11223455667788888
Q ss_pred HHHHhcCCCCCCCCCCccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCC
Q 048643 79 VQEHIVPGVTHWQSPNYFAYFPSSGSIAGFLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLP 148 (506)
Q Consensus 79 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~ 148 (506)
..+-+..+. .+.||.|+|+........-..+.+....+-.....|+ |....-.+.+++||.+.-+..
T Consensus 82 ~~~gi~~Gt-dP~spdyw~~~~~~dQ~~VEaa~la~aL~~a~~~lW~--~L~~~~k~~l~~wL~~~~~~~ 148 (361)
T PF10022_consen 82 YRKGIANGT-DPKSPDYWGFIGDYDQRLVEAASLALALLRAPEWLWD--PLDEEEKENLVDWLKQIRGIK 148 (361)
T ss_pred HHHHHHhcC-CCCCccccCCcccchhhHhHHHHHHHHHHHCHHHHHh--hCCHHHHHHHHHHHHhcCcCC
Confidence 888776664 5689999998765433333333333333322223343 555677788899999876554
No 455
>PRK00910 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=35.29 E-value=98 Score=28.98 Aligned_cols=48 Identities=15% Similarity=0.073 Sum_probs=37.3
Q ss_pred HHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEE
Q 048643 235 SLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVH 283 (506)
Q Consensus 235 ~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lh 283 (506)
+=|..++-.+-+|..|..|++..- +..|..-..+++.++|++||+.++
T Consensus 154 HTEaavdLa~lAGl~p~~vicEil-~~dG~ma~~~~l~~fA~~h~l~~i 201 (218)
T PRK00910 154 HTEGTVDLMQMAGLQPAGVLCELT-NPDGTMAKTPEIIAFGKLHNMPVL 201 (218)
T ss_pred ccHHHHHHHHHcCCCceEEEEEEe-cCCCCcCCHHHHHHHHHHcCCcEE
Confidence 445666666668888877777663 356999999999999999999883
No 456
>PF12818 Tegument_dsDNA: dsDNA viral tegument protein; InterPro: IPR024346 This entry represents the N-terminal domain of tegument proteins from double-stranded DNA herpesvirus.
Probab=34.31 E-value=3.8e+02 Score=26.24 Aligned_cols=54 Identities=15% Similarity=0.140 Sum_probs=32.5
Q ss_pred CHHHHHHHHHHHHhcCCcc--EEEEEecc-CCCCCc-ccChhHHHHHHHHhCCEEEee
Q 048643 232 SPDSLLTQINLDVEAGLVP--LFLCATIG-TTAITA-VDPLKPLCDVAKQFGIWVHVD 285 (506)
Q Consensus 232 d~~~L~~~i~~~~~~g~~p--~~Vv~t~g-tt~tG~-idpl~~I~~ia~~~g~~lhVD 285 (506)
+.+.+++.|+..-=+-..+ +++|-+.+ .++++. +.|++.|..+|+.+|+.+++=
T Consensus 216 ~~~~~~~~i~~~FLNv~~~~vfl~V~n~~~~~~~~~~~~~l~~L~~~c~~~gc~~~iL 273 (282)
T PF12818_consen 216 NREHNEEIIKQHFLNVYCSVVFLVVSNTPIDTNTDQGFGPLDALKRACRLCGCPVHIL 273 (282)
T ss_pred hHHHHHHHHHhhhhccccceEEEEEecCCCCCcccccccHHHHHHHHHHHCCCCEEEE
Confidence 3445777777642222222 22333322 123454 489999999999999999873
No 457
>PRK05876 short chain dehydrogenase; Provisional
Probab=34.26 E-value=4.2e+02 Score=25.32 Aligned_cols=45 Identities=2% Similarity=-0.108 Sum_probs=28.1
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCccc
Q 048643 217 NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVD 266 (506)
Q Consensus 217 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~id 266 (506)
++..+++|- -|.+.+++.+++..+....+-+||-++|....|.+.
T Consensus 56 ~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~ 100 (275)
T PRK05876 56 DVHGVMCDV-----RHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIV 100 (275)
T ss_pred eEEEEeCCC-----CCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcc
Confidence 677777763 467788887776544333345677777765555543
No 458
>COG1936 Predicted nucleotide kinase (related to CMP and AMP kinases) [Nucleotide transport and metabolism]
Probab=33.70 E-value=54 Score=29.50 Aligned_cols=74 Identities=16% Similarity=0.200 Sum_probs=49.8
Q ss_pred ChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCC-CcceEEEEeCchhHHhhh
Q 048643 267 PLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSALVSSL 340 (506)
Q Consensus 267 pl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~ 340 (506)
+.-.+.++++++|+..=+|.-+.-...-++..+..+..+..-++..++.|=.-..| ...-+++-.++..+...+
T Consensus 26 ~~i~l~el~~e~~~~~~~de~r~s~~vD~d~~~~~le~~~~~~~~Ivd~H~~hl~~~~dlVvVLR~~p~~L~~RL 100 (180)
T COG1936 26 KVIELNELAKENGLYTEYDELRKSVIVDVDKLRKRLEELLREGSGIVDSHLSHLLPDCDLVVVLRADPEVLYERL 100 (180)
T ss_pred ceeeHHHHHHhcCCeeccCCccceEEeeHHHHHHHHHHHhccCCeEeechhhhcCCCCCEEEEEcCCHHHHHHHH
Confidence 44567789999999999998775555555555555554435577888999888888 444444445666555443
No 459
>PRK00014 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=33.66 E-value=1.1e+02 Score=28.98 Aligned_cols=47 Identities=19% Similarity=0.103 Sum_probs=36.0
Q ss_pred HHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEE
Q 048643 235 SLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWV 282 (506)
Q Consensus 235 ~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~l 282 (506)
+=|..++-.+-.|..|..|++.. -+..|..-..+++.++|++||+.+
T Consensus 158 HTEAavdLa~lAGl~P~~vicEi-l~~dG~ma~~~~l~~fA~~~~l~i 204 (230)
T PRK00014 158 HTEGSVDLAALAGLRPAGVLCEL-MNADGTMMRGASLERYAAKEGLVA 204 (230)
T ss_pred ccHHHHHHHHHcCCCceEEEEEE-eCCCCCccCHHHHHHHHHHcCCcE
Confidence 34555655556788887777766 345689999999999999999988
No 460
>PRK01792 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=33.44 E-value=1.1e+02 Score=28.62 Aligned_cols=48 Identities=19% Similarity=0.169 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEE
Q 048643 234 DSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWV 282 (506)
Q Consensus 234 ~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~l 282 (506)
.+=|..++=.+-.|..|..|++..- +..|..-+.+++.++|++||+.+
T Consensus 152 GHTEaavdLa~lAGl~p~~vicEil-~~dG~ma~~~~~~~fA~~~~l~~ 199 (214)
T PRK01792 152 GHTEAAVDLARLAGYKEAGVICEIT-NDDGTMARTPEIVEFAKKFGYAV 199 (214)
T ss_pred ChHHHHHHHHHHcCCCceEEEEEEe-cCCCCccCHHHHHHHHHHcCCcE
Confidence 3556677666668888887777663 46699999999999999999988
No 461
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=33.28 E-value=3e+02 Score=23.59 Aligned_cols=54 Identities=19% Similarity=0.076 Sum_probs=37.8
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccCh--hHHHHHH
Q 048643 217 NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPL--KPLCDVA 275 (506)
Q Consensus 217 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl--~~I~~ia 275 (506)
++..+++| --+.+.+++.+++..+.....-+++.++|....+.++++ +++.+..
T Consensus 53 ~~~~~~~D-----~~~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~ 108 (167)
T PF00106_consen 53 KITFIECD-----LSDPESIRALIEEVIKRFGPLDILINNAGIFSDGSLDDLSEEELERVF 108 (167)
T ss_dssp EEEEEESE-----TTSHHHHHHHHHHHHHHHSSESEEEEECSCTTSBSGGGSHHHHHHHHH
T ss_pred cccccccc-----ccccccccccccccccccccccccccccccccccccccccchhhhhcc
Confidence 88999887 347888888888776444445577888887777777665 4444443
No 462
>PRK10494 hypothetical protein; Provisional
Probab=33.12 E-value=1.4e+02 Score=28.80 Aligned_cols=71 Identities=14% Similarity=0.079 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHcCCCCccccCCCCcEEEcC--CchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCch-HHHHHHHH
Q 048643 134 ENIVMDWLGQMLKLPKSFLFSGNGGGVIQG--TTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHC-ALQKAAQI 210 (506)
Q Consensus 134 E~~~~~~la~l~g~~~~~~~~~~~~g~~t~--ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~-s~~ka~~~ 210 (506)
|.++...++..+|.|.+ ..++-. ..|.-|. ..+++.. + .+.++++++..|. .....++.
T Consensus 138 EA~~~~~~l~~lGVp~~-------~Ii~e~~s~nT~eNa--~~~~~~~-----~----~~~iiLVTsa~Hm~RA~~~f~~ 199 (259)
T PRK10494 138 TAEVGARVAQSLGVPRE-------DIITLDLPKDTEEEA--AAVKQAI-----G----DAPFLLVTSASHLPRAMIFFQQ 199 (259)
T ss_pred HHHHHHHHHHHcCCCHH-------HeeeCCCCCCHHHHH--HHHHHHh-----C----CCCEEEECCHHHHHHHHHHHHH
Confidence 66666777778899875 233322 2233332 2222111 1 2346777878885 34455667
Q ss_pred hCCCCCCeEEEecCC
Q 048643 211 VGIDLKNFRAIKTTK 225 (506)
Q Consensus 211 ~G~g~~~v~~v~~~~ 225 (506)
.|+ ++++.|+|.
T Consensus 200 ~Gl---~v~p~Ptd~ 211 (259)
T PRK10494 200 EGL---NPLPAPANQ 211 (259)
T ss_pred cCC---ceeecCCcc
Confidence 799 999999864
No 463
>PF02603 Hpr_kinase_N: HPr Serine kinase N terminus; InterPro: IPR011126 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents the N-terminal region of Hpr Serine/threonine kinase PtsK. This kinase is the sensor in a multicomponent phosphorelay system in control of carbon catabolic repression in bacteria []. This kinase in unusual in that it recognises the tertiary structure of its target and is a member of a novel family unrelated to any previously described protein phosphorylating enzymes []. X-ray analysis of the full-length crystalline enzyme from Staphylococcus xylosus at a resolution of 1.95 A shows the enzyme to consist of two clearly separated domains that are assembled in a hexameric structure resembling a three-bladed propeller. The blades are formed by two N-terminal domains each, and the compact central hub assembles the C-terminal kinase domains []. ; GO: 0000155 two-component sensor activity, 0004672 protein kinase activity, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay), 0006109 regulation of carbohydrate metabolic process; PDB: 1KNX_B 1KO7_A.
Probab=33.06 E-value=48 Score=28.08 Aligned_cols=47 Identities=17% Similarity=0.210 Sum_probs=28.5
Q ss_pred ccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEe
Q 048643 230 GLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHV 284 (506)
Q Consensus 230 ~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhV 284 (506)
.++.+..++.+++-.+ ...| +|+++.|. .|-+++.++|+++++++..
T Consensus 64 ~l~~~~r~~~l~~l~~-~~~P-~iIvt~~~------~~p~~l~e~a~~~~ipll~ 110 (127)
T PF02603_consen 64 SLDEEERKERLEKLFS-YNPP-CIIVTRGL------EPPPELIELAEKYNIPLLR 110 (127)
T ss_dssp CS-HHHHCCHHHHHCT-TT-S--EEEETTT---------HHHHHHHHHCT--EEE
T ss_pred HCCHHHHHHHHHHHhC-CCCC-EEEEECcC------CCCHHHHHHHHHhCCcEEE
Confidence 6788877777776543 3344 56666543 7789999999999998864
No 464
>cd00886 MogA_MoaB MogA_MoaB family. Members of this family are involved in biosynthesis of the molybdenum cofactor (MoCF) an essential cofactor of a diverse group of redox enzymes. MoCF biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea, and eukaryotes. MoCF contains a tricyclic pyranopterin, termed molybdopterin (MPT). MogA, together with MoeA, is responsible for the metal incorporation into MPT, the third step in MoCF biosynthesis. The plant homolog Cnx1 is a MoeA-MogA fusion protein. The mammalian homolog gephyrin is a MogA-MoeA fusion protein, that plays a critical role in postsynaptic anchoring of inhibitory glycine receptors and major GABAa receptor subtypes. In contrast, MoaB shows high similarity to MogA, but little is known about its physiological role. All well studied members of this family form highly stable trimers.
Probab=32.94 E-value=2.1e+02 Score=24.91 Aligned_cols=63 Identities=16% Similarity=0.018 Sum_probs=39.9
Q ss_pred chHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHH
Q 048643 201 HCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCD 273 (506)
Q Consensus 201 H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ 273 (506)
.+.+.+.++..|. +++.+.+-++ |.+.+++++++..++ ...- ++++.|.+..|..|-..+..+
T Consensus 22 ~~~l~~~l~~~G~---~v~~~~~v~D-----d~~~i~~~l~~~~~~-~~~D-lVittGG~s~g~~D~t~~al~ 84 (152)
T cd00886 22 GPALVELLEEAGH---EVVAYEIVPD-----DKDEIREALIEWADE-DGVD-LILTTGGTGLAPRDVTPEATR 84 (152)
T ss_pred HHHHHHHHHHcCC---eeeeEEEcCC-----CHHHHHHHHHHHHhc-CCCC-EEEECCCcCCCCCcCcHHHHH
Confidence 3456677888898 7777766432 678888888765441 0122 445556677788887655443
No 465
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=32.65 E-value=1.9e+02 Score=29.42 Aligned_cols=53 Identities=19% Similarity=0.233 Sum_probs=32.5
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeeccc
Q 048643 217 NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAY 288 (506)
Q Consensus 217 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~ 288 (506)
++..+.+| ..|.+.|++.+++.. +|+-++|.. --..|++.|-++|+. +||.++
T Consensus 47 ~~~~~~~d-----~~~~~~l~~~~~~~d-------vVin~~gp~------~~~~v~~~~i~~g~~-yvD~~~ 99 (386)
T PF03435_consen 47 RVEAVQVD-----VNDPESLAELLRGCD-------VVINCAGPF------FGEPVARACIEAGVH-YVDTSY 99 (386)
T ss_dssp TEEEEE-------TTTHHHHHHHHTTSS-------EEEE-SSGG------GHHHHHHHHHHHT-E-EEESS-
T ss_pred ceeEEEEe-----cCCHHHHHHHHhcCC-------EEEECCccc------hhHHHHHHHHHhCCC-eeccch
Confidence 78888876 457888888887652 455555443 235788888888875 477544
No 466
>COG0159 TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism]
Probab=32.27 E-value=3.6e+02 Score=26.09 Aligned_cols=89 Identities=22% Similarity=0.248 Sum_probs=51.3
Q ss_pred HHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC----hhHHHHHHHHh
Q 048643 203 ALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP----LKPLCDVAKQF 278 (506)
Q Consensus 203 s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp----l~~I~~ia~~~ 278 (506)
.+.+.++-.|+ +.+.+-.. .-+.+.|++..+.. .| +|.+..-+-.||+-++ ++++.+-.|++
T Consensus 138 ~~~~~~~~~gi---~~I~lvaP-----tt~~~rl~~i~~~a--~G----FiY~vs~~GvTG~~~~~~~~~~~~v~~vr~~ 203 (265)
T COG0159 138 ELLKAAEKHGI---DPIFLVAP-----TTPDERLKKIAEAA--SG----FIYYVSRMGVTGARNPVSADVKELVKRVRKY 203 (265)
T ss_pred HHHHHHHHcCC---cEEEEeCC-----CCCHHHHHHHHHhC--CC----cEEEEecccccCCCcccchhHHHHHHHHHHh
Confidence 57888888898 77665432 33556666655543 34 3444444446777766 67777777775
Q ss_pred -CCEEEeecccccccccCccchhhhcCCCCCCeeE
Q 048643 279 -GIWVHVDAAYAGSACICPEFQHFIDGVEGADSFS 312 (506)
Q Consensus 279 -g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~ 312 (506)
++++.| |+.+-.++....+.. -||-+.
T Consensus 204 ~~~Pv~v-----GFGIs~~e~~~~v~~--~ADGVI 231 (265)
T COG0159 204 TDVPVLV-----GFGISSPEQAAQVAE--AADGVI 231 (265)
T ss_pred cCCCeEE-----ecCcCCHHHHHHHHH--hCCeEE
Confidence 566655 444444443333222 266555
No 467
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=32.17 E-value=34 Score=33.27 Aligned_cols=32 Identities=25% Similarity=0.275 Sum_probs=28.1
Q ss_pred ccCCCCCcccChhHHHHHHHHhCCEEEeeccc
Q 048643 257 IGTTAITAVDPLKPLCDVAKQFGIWVHVDAAY 288 (506)
Q Consensus 257 ~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~ 288 (506)
...+..|..++++++++.||++|+.+++|-+.
T Consensus 43 ~vd~~~Gt~~d~~~Lv~~~h~~gi~VilD~V~ 74 (316)
T PF00128_consen 43 AVDPRFGTMEDFKELVDAAHKRGIKVILDVVP 74 (316)
T ss_dssp EESTTTBHHHHHHHHHHHHHHTTCEEEEEEET
T ss_pred ccccccchhhhhhhhhhccccccceEEEeeec
Confidence 34567889999999999999999999999865
No 468
>PRK03353 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=32.07 E-value=1.2e+02 Score=28.52 Aligned_cols=50 Identities=20% Similarity=0.117 Sum_probs=39.0
Q ss_pred HHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeec
Q 048643 235 SLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDA 286 (506)
Q Consensus 235 ~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDa 286 (506)
+=|.+++=.+-.|..|..|++..- +..|..-+.+++.++|++||+.+ ++.
T Consensus 153 htEaavdLa~lAgl~P~avi~ei~-~~~G~~~~~~~~~~fA~~~~l~~-v~i 202 (217)
T PRK03353 153 HTEATIDLMTLAGLKPAGVLCELT-NDDGTMARAPECIAFAKQHNMPV-LTI 202 (217)
T ss_pred chHHHHHHHHHcCCCceEEEEEee-cCCCCcccHHHHHHHHHHcCCcE-EEH
Confidence 346667666678888987777663 35689999999999999999988 553
No 469
>PF05913 DUF871: Bacterial protein of unknown function (DUF871); InterPro: IPR008589 This family consists of several conserved hypothetical proteins from bacteria and archaea. The function of this family is unknown though a number are annotated as outer surface proteins.; PDB: 2P0O_A 1X7F_A.
Probab=31.49 E-value=65 Score=32.73 Aligned_cols=56 Identities=23% Similarity=0.254 Sum_probs=37.4
Q ss_pred CHHHHHHHHHHHHhcCCccEEEEEeccCCC-CCcccChhHHHHHHHHhCCEEEeecc
Q 048643 232 SPDSLLTQINLDVEAGLVPLFLCATIGTTA-ITAVDPLKPLCDVAKQFGIWVHVDAA 287 (506)
Q Consensus 232 d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~-tG~idpl~~I~~ia~~~g~~lhVDaA 287 (506)
..+..++.|+...+.|..-++..+-.+... .-.++.+++|.++|+++|+.+++|-.
T Consensus 12 ~~~~~~~yi~~a~~~Gf~~iFTSL~ipe~~~~~~~~~~~~l~~~a~~~~~~v~~Dis 68 (357)
T PF05913_consen 12 SFEENKAYIEKAAKYGFKRIFTSLHIPEDDPEDYLERLKELLKLAKELGMEVIADIS 68 (357)
T ss_dssp -HHHHHHHHHHHHCTTEEEEEEEE---------HHHHHHHHHHHHHHCT-EEEEEE-
T ss_pred CHHHHHHHHHHHHHCCCCEEECCCCcCCCCHHHHHHHHHHHHHHHHHCCCEEEEECC
Confidence 678888889988888876655555555432 34457789999999999999999964
No 470
>PRK11633 cell division protein DedD; Provisional
Probab=31.15 E-value=2.1e+02 Score=26.97 Aligned_cols=49 Identities=14% Similarity=0.192 Sum_probs=36.3
Q ss_pred HHHHHHHHHhcCc-EEEeeee-ECCEEEEEEEecCCCCCHHHHHHHHHHHHHH
Q 048643 444 NRELLESINASGK-AYMTHAV-CGGIYAMRFAVGATLTEERHVMVAWTMVQEQ 494 (506)
Q Consensus 444 ~~~l~~~l~~~g~-~~~~~~~-~~g~~~lR~~~~~~~tt~edi~~li~~l~~~ 494 (506)
.+.|..+|...|. .|+.... .+| .+.|+-+ .+..++++.+++...|+++
T Consensus 163 A~~l~~kL~~~G~~Ay~~~~~~~~G-~~tRV~V-GP~~sk~~ae~~~~~Lk~~ 213 (226)
T PRK11633 163 VNEIVAKLRLSGYRVYTVPSTPVQG-KITRIYV-GPDASKDKLKGSLGELKQL 213 (226)
T ss_pred HHHHHHHHHHCCCeeEEEeeecCCC-cEEEEEe-CCCCCHHHHHHHHHHHHHh
Confidence 4678888888887 3444333 344 4668877 6999999999999999886
No 471
>PF12481 DUF3700: Aluminium induced protein ; InterPro: IPR024286 This entry represents a domain found in plant proteins that is approximately 120 amino acids in length. There are two conserved sequence motifs: YGL and LRDR.
Probab=31.11 E-value=2.2e+02 Score=26.64 Aligned_cols=194 Identities=19% Similarity=0.215 Sum_probs=98.2
Q ss_pred ChhHHhhhCC-CCCCCCCCCHHHHHHHHHHHhcCCCC--CCCCCCccccCCCCCCHHHHHHHHHHhhcCCCCcccccChh
Q 048643 53 EPGYLRKRLP-ECAPYNPESMETILQDVQEHIVPGVT--HWQSPNYFAYFPSSGSIAGFLGEMLSSGFNVVGFNWISSPA 129 (506)
Q Consensus 53 ~p~~l~~~~~-~~~p~~~~~~~~il~~~~~~~~~~~~--~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~ 129 (506)
.|++|+.-.. ..-+..+...++|++++.+..- +.. +...-.+++|.+...+ .+.-..+. .++..-..+.
T Consensus 11 ~PeeL~sp~s~~~s~~~~k~~~ell~~F~s~~p-~a~s~~~g~~~~lAys~~~~~--~l~pR~F~-~~DdIfCiF~---- 82 (228)
T PF12481_consen 11 PPEELNSPASSLPSSKKPKGPEELLKDFVSANP-NAFSMNFGDSAALAYSHSNQS--SLHPRLFA-GVDDIFCIFL---- 82 (228)
T ss_pred CchHhcCcccCCCcccCCCCHHHHHHHHHHhCC-CeEEEEcCCCEEEEEecCCCC--cccccccc-ccCCEEEEEe----
Confidence 4777766332 2334456789999999987543 322 2333456667654433 11112222 2222212222
Q ss_pred hHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHH--HHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHH
Q 048643 130 ATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAI--LCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKA 207 (506)
Q Consensus 130 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~--l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka 207 (506)
-.||.. ..|.+.+|+.... +|++ +.|..+.|++ | | ..+ .+.
T Consensus 83 -G~L~Nl--~~L~qqYGLsK~~--------------nEa~~vIEAYrtLRDR-----g----P-------yPa----dqv 125 (228)
T PF12481_consen 83 -GSLENL--CSLRQQYGLSKGA--------------NEAMFVIEAYRTLRDR-----G----P-------YPA----DQV 125 (228)
T ss_pred -cchhhH--HHHHHHhCcCcCc--------------chhhhHHHHHHHhhcc-----C----C-------CCh----HHH
Confidence 235654 6788889986642 3443 3344455543 1 1 111 223
Q ss_pred HHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc---cChhHHHHHHHHh------
Q 048643 208 AQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV---DPLKPLCDVAKQF------ 278 (506)
Q Consensus 208 ~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i---dpl~~I~~ia~~~------ 278 (506)
.+-+. |.-..+..+... +++ +...-.+|..|++ .|.+..|.+ |+++-|-+-|.+.
T Consensus 126 v~~L~-G~FaFVlyD~~~---~tv--------f~A~d~~G~vpLy----WGi~~DGslv~Sdd~~~ik~~C~kS~ApFP~ 189 (228)
T PF12481_consen 126 VKDLE-GSFAFVLYDSKT---GTV--------FVARDSDGSVPLY----WGIAADGSLVFSDDLELIKEGCGKSFAPFPA 189 (228)
T ss_pred HHhcc-CceEEEEEecCC---CcE--------EEeecCCCCcceE----EEEeCCCCEEEcCCHHHHHhhhhhccCCCCc
Confidence 33331 222334443321 122 1111234666765 344456655 8999998889874
Q ss_pred CCEEEeecccccccccCccchhhhcCCCCCCee
Q 048643 279 GIWVHVDAAYAGSACICPEFQHFIDGVEGADSF 311 (506)
Q Consensus 279 g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi 311 (506)
|..+|.++ | +.-.+.....++.+.++||-
T Consensus 190 Gc~f~S~~---G-l~sfehP~nk~k~~prvDse 218 (228)
T PF12481_consen 190 GCFFSSEG---G-LRSFEHPKNKVKAMPRVDSE 218 (228)
T ss_pred ceEEEecC---c-eEeecCCcccccccccccCc
Confidence 78888873 2 33333344556667788873
No 472
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]
Probab=30.93 E-value=3.8e+02 Score=25.21 Aligned_cols=101 Identities=13% Similarity=0.116 Sum_probs=60.3
Q ss_pred cEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCC-----c----hHHHHHHHHhCCCCCCeEEEecCCCCC
Q 048643 158 GGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQT-----H----CALQKAAQIVGIDLKNFRAIKTTKSSS 228 (506)
Q Consensus 158 ~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~-----H----~s~~ka~~~~G~g~~~v~~v~~~~~~~ 228 (506)
...+.|||..+++....+.+. |.+ ....+.+.+... | -.....|+.+|+ .++...++. .
T Consensus 3 ~~aL~SGGKDS~~Al~~a~~~------G~e-V~~Ll~~~p~~~dS~m~H~~n~~~~~~~Ae~~gi---~l~~~~~~g--~ 70 (223)
T COG2102 3 VIALYSGGKDSFYALYLALEE------GHE-VVYLLTVKPENGDSYMFHTPNLELAELQAEAMGI---PLVTFDTSG--E 70 (223)
T ss_pred EEEEEecCcHHHHHHHHHHHc------CCe-eEEEEEEecCCCCeeeeeccchHHHHHHHHhcCC---ceEEEecCc--c
Confidence 356778899997655444433 111 012223333322 2 345566778899 788888763 1
Q ss_pred cccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc---cChhHHHHHHHHhCCEE
Q 048643 229 YGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV---DPLKPLCDVAKQFGIWV 282 (506)
Q Consensus 229 ~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i---dpl~~I~~ia~~~g~~l 282 (506)
..-..+.|.++++.-..+ .| .+|+| +....+-.+|++.|+-.
T Consensus 71 ~e~eve~L~~~l~~l~~d-----~i-------v~GaI~s~yqk~rve~lc~~lGl~~ 115 (223)
T COG2102 71 EEREVEELKEALRRLKVD-----GI-------VAGAIASEYQKERVERLCEELGLKV 115 (223)
T ss_pred chhhHHHHHHHHHhCccc-----EE-------EEchhhhHHHHHHHHHHHHHhCCEE
Confidence 245678888888765322 12 24666 45778888999998765
No 473
>cd00758 MoCF_BD MoCF_BD: molybdenum cofactor (MoCF) binding domain (BD). This domain is found a variety of proteins involved in biosynthesis of molybdopterin cofactor, like MoaB, MogA, and MoeA. The domain is presumed to bind molybdopterin.
Probab=30.71 E-value=2.2e+02 Score=24.04 Aligned_cols=62 Identities=16% Similarity=0.068 Sum_probs=39.6
Q ss_pred CchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHH
Q 048643 200 THCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCD 273 (506)
Q Consensus 200 ~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ 273 (506)
..+.+.+.++..|. ++....+-++ |.+.+++++++..++ .- ++++.|.+..|..|-..+..+
T Consensus 20 n~~~l~~~l~~~G~---~v~~~~~v~D-----d~~~i~~~i~~~~~~---~D-lvittGG~g~g~~D~t~~ai~ 81 (133)
T cd00758 20 NGPALEALLEDLGC---EVIYAGVVPD-----DADSIRAALIEASRE---AD-LVLTTGGTGVGRRDVTPEALA 81 (133)
T ss_pred hHHHHHHHHHHCCC---EEEEeeecCC-----CHHHHHHHHHHHHhc---CC-EEEECCCCCCCCCcchHHHHH
Confidence 44566677788888 7877765432 677888888765432 22 555556677777777665443
No 474
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=30.57 E-value=4.6e+02 Score=24.56 Aligned_cols=44 Identities=14% Similarity=0.067 Sum_probs=26.7
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc
Q 048643 217 NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV 265 (506)
Q Consensus 217 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i 265 (506)
++..+.+| -.|.+.+++.+++..+.-..+-++|-++|....+.+
T Consensus 56 ~~~~~~~D-----l~~~~~~~~~~~~~~~~~g~iD~lv~~ag~~~~~~~ 99 (251)
T PRK12481 56 KFHFITAD-----LIQQKDIDSIVSQAVEVMGHIDILINNAGIIRRQDL 99 (251)
T ss_pred eEEEEEeC-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCc
Confidence 67777776 447778888777654332234456667765444433
No 475
>TIGR00177 molyb_syn molybdenum cofactor synthesis domain. The Drosophila protein cinnamon, the Arabidopsis protein cnx1, and rat protein gephyrin each have one domain like MoeA and one like MoaB and Mog. These domains are, however, distantly related to each other, as captured by this model. Gephyrin is unusual in that it seems to be a tubulin-binding neuroprotein involved in the clustering of both blycine receptors and GABA receptors, rather than a protein of molybdenum cofactor biosynthesis.
Probab=30.37 E-value=2.8e+02 Score=23.79 Aligned_cols=63 Identities=14% Similarity=0.173 Sum_probs=40.3
Q ss_pred CCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHH
Q 048643 199 QTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCD 273 (506)
Q Consensus 199 ~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ 273 (506)
..-+.+...++.+|+ ++..+.+-.+ |.+.|.++|++..+. .-+|+.| |.+..|.-|-..+..+
T Consensus 27 ~n~~~l~~~l~~~G~---~v~~~~~v~D-----d~~~i~~~l~~~~~~---~DliItt-GG~g~g~~D~t~~ai~ 89 (144)
T TIGR00177 27 SNGPLLAALLEEAGF---NVSRLGIVPD-----DPEEIREILRKAVDE---ADVVLTT-GGTGVGPRDVTPEALE 89 (144)
T ss_pred CcHHHHHHHHHHCCC---eEEEEeecCC-----CHHHHHHHHHHHHhC---CCEEEEC-CCCCCCCCccHHHHHH
Confidence 345577778888898 8887765432 677888888765431 2245555 5566677776655443
No 476
>PRK08265 short chain dehydrogenase; Provisional
Probab=30.32 E-value=4.7e+02 Score=24.62 Aligned_cols=59 Identities=15% Similarity=-0.101 Sum_probs=33.1
Q ss_pred EEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCC
Q 048643 193 VVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTT 260 (506)
Q Consensus 193 ~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt 260 (506)
+++++. ......+....++- ++..+++|- .|.+.+++.++...+.-..+-+++-++|..
T Consensus 33 V~~~~r-~~~~~~~~~~~~~~---~~~~~~~Dl-----~~~~~~~~~~~~~~~~~g~id~lv~~ag~~ 91 (261)
T PRK08265 33 VAIVDI-DADNGAAVAASLGE---RARFIATDI-----TDDAAIERAVATVVARFGRVDILVNLACTY 91 (261)
T ss_pred EEEEeC-CHHHHHHHHHHhCC---eeEEEEecC-----CCHHHHHHHHHHHHHHhCCCCEEEECCCCC
Confidence 444443 23334455555554 677788763 467788877776544323344566666643
No 477
>PF06415 iPGM_N: BPG-independent PGAM N-terminus (iPGM_N); InterPro: IPR011258 This family represents the N-terminal region of the 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (or phosphoglyceromutase or BPG-independent PGAM) protein (5.4.2.1 from EC). The family is found in conjunction with Metalloenzyme (located in the C-terminal region of the protein). ; GO: 0004619 phosphoglycerate mutase activity, 0030145 manganese ion binding, 0006007 glucose catabolic process, 0005737 cytoplasm; PDB: 1EQJ_A 1EJJ_A 1O99_A 1O98_A 3IGZ_B 3IGY_B 3NVL_A 2IFY_A.
Probab=30.28 E-value=82 Score=29.63 Aligned_cols=54 Identities=24% Similarity=0.273 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhC---CEEEe--ec
Q 048643 233 PDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFG---IWVHV--DA 286 (506)
Q Consensus 233 ~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g---~~lhV--Da 286 (506)
-+.|.++++...+++.+.-++=+.+.....+.++-|.+|.++|+++| +++|+ ||
T Consensus 13 n~~l~~~~~~~k~~~~~lHl~GLlSdGGVHSh~~Hl~al~~~a~~~gv~~V~vH~f~DG 71 (223)
T PF06415_consen 13 NPVLLEAIEHAKKNGGRLHLMGLLSDGGVHSHIDHLFALIKLAKKQGVKKVYVHAFTDG 71 (223)
T ss_dssp SHHHHHHHHHHCCTT--EEEEEEESS-SSS--HHHHHHHHHHHHHTT-SEEEEEEEE-S
T ss_pred CHHHHHHHHHHHhcCCeEEEEEEecCCCccccHHHHHHHHHHHHHcCCCEEEEEEecCC
Confidence 36788888877665544333333333445667788999999999988 45663 55
No 478
>PRK09441 cytoplasmic alpha-amylase; Reviewed
Probab=30.22 E-value=38 Score=35.95 Aligned_cols=30 Identities=23% Similarity=0.180 Sum_probs=26.7
Q ss_pred CCCCCcccChhHHHHHHHHhCCEEEeeccc
Q 048643 259 TTAITAVDPLKPLCDVAKQFGIWVHVDAAY 288 (506)
Q Consensus 259 tt~tG~idpl~~I~~ia~~~g~~lhVDaA~ 288 (506)
.+..|.-++++++++-||++|+.+++|.+.
T Consensus 74 d~~fGt~~dl~~Li~~~H~~Gi~vi~D~V~ 103 (479)
T PRK09441 74 RTKYGTKEELLNAIDALHENGIKVYADVVL 103 (479)
T ss_pred CcCcCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 356788999999999999999999999864
No 479
>PF14488 DUF4434: Domain of unknown function (DUF4434)
Probab=30.07 E-value=2e+02 Score=25.62 Aligned_cols=56 Identities=23% Similarity=0.237 Sum_probs=38.4
Q ss_pred ccCHHHHHHHHHHHHhcCCccEEEEEecc-C------------CCCCcccChhHHHHHHHHhCCEEEee
Q 048643 230 GLSPDSLLTQINLDVEAGLVPLFLCATIG-T------------TAITAVDPLKPLCDVAKQFGIWVHVD 285 (506)
Q Consensus 230 ~~d~~~L~~~i~~~~~~g~~p~~Vv~t~g-t------------t~tG~idpl~~I~~ia~~~g~~lhVD 285 (506)
.++.++-++.++.-.+-|...+++.-+.- . ...+..|+|+.+.+.|+++|+-|++-
T Consensus 16 ~~~~~~W~~~~~~m~~~GidtlIlq~~~~~~~~~yps~~~~~~~~~~~~d~l~~~L~~A~~~Gmkv~~G 84 (166)
T PF14488_consen 16 NWTPAQWREEFRAMKAIGIDTLILQWTGYGGFAFYPSKLSPGGFYMPPVDLLEMILDAADKYGMKVFVG 84 (166)
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEEEEeecCCcccCCccccCccccCCcccHHHHHHHHHHHcCCEEEEe
Confidence 56777777777776666766554443321 1 11245589999999999999999873
No 480
>cd07021 Clp_protease_NfeD_like Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease. Nodulation formation efficiency D (NfeD; stomatin operon partner protein, STOPP; DUF107) is a member of membrane-anchored ClpP-class proteases. Currently, more than 300 NfeD homologs have been identified - all of which are bacterial or archaeal in origin. Majority of these genomes have been shown to possess operons containing a homologous NfeD/stomatin gene pair, causing NfeD to be previously named STOPP (stomatin operon partner protein). NfeD homologs can be divided into two groups: long and short forms. Long-form homologs have a putative ClpP-class serine protease domain while the short form homologs do not. Downstream from the ClpP-class domain is the so-called NfeD or DUF107 domain. N-terminal region of the NfeD homolog PH1510 (1510-N or PH1510-N) from Pyrococcus horikoshii has been shown to possess serine protease activity and has a Ser-Lys catalytic dyad, preferentiall
Probab=30.02 E-value=1.6e+02 Score=26.66 Aligned_cols=76 Identities=18% Similarity=0.069 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCE--EEeec-ccccccccCccchhhhcCCCCCC
Q 048643 233 PDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIW--VHVDA-AYAGSACICPEFQHFIDGVEGAD 309 (506)
Q Consensus 233 ~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~--lhVDa-A~gg~~~~~~~~~~~~~gi~~aD 309 (506)
.+.|++.|++..+++...+++.. +|+-|.++...+|.+..++.... ..|++ |.+++.++.- -+|
T Consensus 15 ~~~l~~~l~~a~~~~~~~ivl~i---nspGG~v~~~~~I~~~l~~~~~pvva~V~g~AaSaG~~ia~----------a~d 81 (178)
T cd07021 15 AAFVERALKEAKEEGADAVVLDI---DTPGGRVDSALEIVDLILNSPIPTIAYVNDRAASAGALIAL----------AAD 81 (178)
T ss_pred HHHHHHHHHHHHhCCCCeEEEEE---ECcCCCHHHHHHHHHHHHhCCCCEEEEECCchHHHHHHHHH----------hCC
Confidence 34577778777666533333333 56779999999999998887644 45554 4444433221 466
Q ss_pred eeEEcCccccCC
Q 048643 310 SFSLNAHKWFFT 321 (506)
Q Consensus 310 si~~~~hK~l~~ 321 (506)
.+.+.++-.++.
T Consensus 82 ~i~m~p~a~iG~ 93 (178)
T cd07021 82 EIYMAPGATIGA 93 (178)
T ss_pred eEEECCCCeEec
Confidence 677766655553
No 481
>TIGR00290 MJ0570_dom MJ0570-related uncharacterized domain. Proteins with this uncharacterized domain include two apparent ortholog families in the Archaea, one of which is universal among the first four completed archaeal genomes, and YLR143W, a much longer protein from Saccharomyces cerevisiae. The domain comprises the full length of the archaeal proteins and the first third of the yeast protein.
Probab=29.91 E-value=4.8e+02 Score=24.57 Aligned_cols=100 Identities=13% Similarity=0.090 Sum_probs=56.2
Q ss_pred EEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCC-----Cc----hHHHHHHHHhCCCCCCeEEEecCCCCCc
Q 048643 159 GVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQ-----TH----CALQKAAQIVGIDLKNFRAIKTTKSSSY 229 (506)
Q Consensus 159 g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~-----~H----~s~~ka~~~~G~g~~~v~~v~~~~~~~~ 229 (506)
.+..|||..++++...+..+ . .- ...+.+++.. .| .-+...|+.+|+ .++.++.+.. .
T Consensus 4 ~~l~SGGKDS~~al~~a~~~-~-~v------~~L~t~~~~~~~s~~~H~~~~~~~~~qA~algi---pl~~~~~~~~--~ 70 (223)
T TIGR00290 4 AALISGGKDSCLALYHALKE-H-EV------ISLVNIMPENEESYMFHGVNAHLTDLQAESIGI---PLIKLYTEGT--E 70 (223)
T ss_pred EEEecCcHHHHHHHHHHHHh-C-ee------EEEEEEecCCCCcccccccCHHHHHHHHHHcCC---CeEEeecCCC--c
Confidence 46778999999765555443 1 10 0111112221 23 345677888999 7777776421 2
Q ss_pred ccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCccc---ChhHHHHHHHHhCCEEE
Q 048643 230 GLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVD---PLKPLCDVAKQFGIWVH 283 (506)
Q Consensus 230 ~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~id---pl~~I~~ia~~~g~~lh 283 (506)
.--.+.|++++++. | .-.| .+|.++ -...+-.+|++.|+..+
T Consensus 71 e~~~e~l~~~l~~~---g--v~~v-------v~GdI~s~~qr~~~e~v~~~lgl~~~ 115 (223)
T TIGR00290 71 EDEVEELKGILHTL---D--VEAV-------VFGAIYSEYQKTRIERVCRELGLKSF 115 (223)
T ss_pred cHHHHHHHHHHHHc---C--CCEE-------EECCcccHHHHHHHHHHHHhcCCEEe
Confidence 33455666666553 2 1111 257774 35677788999887764
No 482
>CHL00073 chlN photochlorophyllide reductase subunit N
Probab=29.77 E-value=94 Score=32.71 Aligned_cols=51 Identities=12% Similarity=0.030 Sum_probs=32.5
Q ss_pred CHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc-cChhHHHHHHH-HhCCEEEe
Q 048643 232 SPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV-DPLKPLCDVAK-QFGIWVHV 284 (506)
Q Consensus 232 d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i-dpl~~I~~ia~-~~g~~lhV 284 (506)
+-+.|++.|.+..++-....+++.+ |=.+|.| |||+.+++-++ ++|+.+++
T Consensus 81 ~~~~L~~~i~ei~~~~~p~~ifv~~--TC~t~iIGdDle~va~~~~~~~gipVV~ 133 (457)
T CHL00073 81 DYEELKRLCLQIKKDRNPSVIVWIG--TCTTEIIKMDLEGMAPKLEAEIGIPIVV 133 (457)
T ss_pred CHHHHHHHHHHHHHhCCCCEEEEEc--cCcHHhhccCHHHHHHHHHHhhCCCEEE
Confidence 3458888888776554322222222 2235666 99999987665 78988764
No 483
>PF01301 Glyco_hydro_35: Glycosyl hydrolases family 35; InterPro: IPR001944 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 35 GH35 from CAZY comprises enzymes with only one known activity; beta-galactosidase (3.2.1.23 from EC). Mammalian beta-galactosidase is a lysosomal enzyme (gene GLB1) which cleaves the terminal galactose from gangliosides, glycoproteins, and glycosaminoglycans and whose deficiency is the cause of the genetic disease Gm(1) gangliosidosis (Morquio disease type B).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3OGS_A 3OGV_A 3OGR_A 3OG2_A 1TG7_A 1XC6_A 3THC_C 3THD_D 3D3A_A 4E8D_B ....
Probab=29.44 E-value=1.1e+02 Score=30.67 Aligned_cols=21 Identities=24% Similarity=0.415 Sum_probs=16.7
Q ss_pred ccChhHHHHHHHHhCCEEEee
Q 048643 265 VDPLKPLCDVAKQFGIWVHVD 285 (506)
Q Consensus 265 idpl~~I~~ia~~~g~~lhVD 285 (506)
..||....++|+++|+++++-
T Consensus 62 ~~dl~~f~~~a~~~gl~vilr 82 (319)
T PF01301_consen 62 NRDLDRFLDLAQENGLYVILR 82 (319)
T ss_dssp GG-HHHHHHHHHHTT-EEEEE
T ss_pred hhhHHHHHHHHHHcCcEEEec
Confidence 378999999999999998875
No 484
>TIGR00334 5S_RNA_mat_M5 ribonuclease M5. This family of orthologous proteins shows a weak but significant similarity to the central region of the DnaG-type DNA primase. The region of similarity is termed the Toprim (topoisomerase-primase) domain and is also shared by RecR, OLD family nucleases, and type IA and II topoisomerases.
Probab=29.40 E-value=58 Score=29.27 Aligned_cols=53 Identities=11% Similarity=0.181 Sum_probs=40.4
Q ss_pred cccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeeccccccc
Q 048643 229 YGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSA 292 (506)
Q Consensus 229 ~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~ 292 (506)
|+-|...|.++++. -++.|.|+.. ..+-++.|.+..++.|+.+..|.=++|--
T Consensus 10 GK~D~~~lk~~~d~---------~~I~T~Gs~i--~~~~i~~i~~~~~~rgVIIfTDpD~~Gek 62 (174)
T TIGR00334 10 GKDDQARIKQAFDV---------DVIETNGSAL--KDETINLIKKAQKKQGVIILTDPDFPGEK 62 (174)
T ss_pred cchHHHHHHHhcCc---------eEEEECCCcc--CHHHHHHHHHHhhcCCEEEEeCCCCchHH
Confidence 58899999888742 2677777543 34558888888999999999999887753
No 485
>PF03599 CdhD: CO dehydrogenase/acetyl-CoA synthase delta subunit; InterPro: IPR016041 This entry represents a conserved region predicted to form a TIM alpha/beta barrel, and is found in the delta subunit of a number of CO dehydrogenase/acetyl-CoA synthase enzymes.; PDB: 2H9A_B 2YCL_B 4DJF_E 4DJD_C 4DJE_C.
Probab=29.36 E-value=1e+02 Score=31.57 Aligned_cols=72 Identities=21% Similarity=0.313 Sum_probs=39.1
Q ss_pred CHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCee
Q 048643 232 SPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSF 311 (506)
Q Consensus 232 d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi 311 (506)
|++.|+++++.. +|.+|.+-.+|. ++.++++++|.+||..+.+=+.-..-. ..+.-.++..+ +.+.+
T Consensus 107 D~evl~aale~~--~~~kpLL~aAt~--------eNyk~m~~lA~~y~~pl~v~sp~Dln~--lk~Ln~~l~~~-Gv~dI 173 (386)
T PF03599_consen 107 DPEVLKAALEAC--AGKKPLLYAATE--------ENYKAMAALAKEYGHPLIVSSPIDLNL--LKQLNIKLTEL-GVKDI 173 (386)
T ss_dssp HHHHHHHHHHHT--TTS--EEEEEBT--------TTHHHHHHHHHHCT-EEEEE-SSCHHH--HHHHHHHHHTT-T-GGE
T ss_pred CHHHHHHHHHHh--CcCCcEEeEcCH--------HHHHHHHHHHHHcCCeEEEEecccHHH--HHHHHHHHHhc-CcccE
Confidence 788888888765 456776644443 478999999999998887633211111 11122222222 45778
Q ss_pred EEcCc
Q 048643 312 SLNAH 316 (506)
Q Consensus 312 ~~~~h 316 (506)
.+|+.
T Consensus 174 VlDpg 178 (386)
T PF03599_consen 174 VLDPG 178 (386)
T ss_dssp EEE--
T ss_pred EecCC
Confidence 88874
No 486
>smart00852 MoCF_biosynth Probable molybdopterin binding domain. This domain is found a variety of proteins involved in biosynthesis of molybdopterin cofactor. The domain is presumed to bind molybdopterin. The structure of this domain is known, and it forms an alpha/beta structure. In the known structure of Gephyrin this domain mediates trimerisation.
Probab=29.13 E-value=2.8e+02 Score=23.40 Aligned_cols=62 Identities=15% Similarity=0.112 Sum_probs=39.1
Q ss_pred CCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHH
Q 048643 199 QTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLC 272 (506)
Q Consensus 199 ~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~ 272 (506)
...+.+.+.++.+|. +++...+-.+ |.+.+++++++..+. .-+|+.+ |.+..|..|-..+..
T Consensus 18 ~~~~~l~~~l~~~G~---~~~~~~~v~D-----d~~~I~~~l~~~~~~---~dliitt-GG~g~g~~D~t~~~l 79 (135)
T smart00852 18 SNGPALAELLTELGI---EVTRYVIVPD-----DKEAIKEALREALER---ADLVITT-GGTGPGPDDVTPEAV 79 (135)
T ss_pred CcHHHHHHHHHHCCC---eEEEEEEeCC-----CHHHHHHHHHHHHhC---CCEEEEc-CCCCCCCCcCcHHHH
Confidence 344577788888898 6665554322 677888888765532 2244444 555567777766544
No 487
>PRK08643 acetoin reductase; Validated
Probab=29.07 E-value=4.8e+02 Score=24.31 Aligned_cols=44 Identities=14% Similarity=0.083 Sum_probs=27.3
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc
Q 048643 217 NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV 265 (506)
Q Consensus 217 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i 265 (506)
++..+++| --|.+.+++.+++..++...+-.|+.++|....+.+
T Consensus 52 ~~~~~~~D-----l~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~ 95 (256)
T PRK08643 52 KAIAVKAD-----VSDRDQVFAAVRQVVDTFGDLNVVVNNAGVAPTTPI 95 (256)
T ss_pred eEEEEECC-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCc
Confidence 67777776 447778888777655433334567777765544444
No 488
>PLN02331 phosphoribosylglycinamide formyltransferase
Probab=28.88 E-value=3.7e+02 Score=24.92 Aligned_cols=67 Identities=22% Similarity=0.226 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHH
Q 048643 167 EAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINL 242 (506)
Q Consensus 167 ~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~ 242 (506)
-+|+.++.-+.... ..+ ...++++++.......+.|+-.|+ .+..++......-...-+++.+.+++
T Consensus 10 Gsn~~al~~~~~~~----~l~--~~i~~visn~~~~~~~~~A~~~gI---p~~~~~~~~~~~~~~~~~~~~~~l~~ 76 (207)
T PLN02331 10 GSNFRAIHDACLDG----RVN--GDVVVVVTNKPGCGGAEYARENGI---PVLVYPKTKGEPDGLSPDELVDALRG 76 (207)
T ss_pred ChhHHHHHHHHHcC----CCC--eEEEEEEEeCCCChHHHHHHHhCC---CEEEeccccCCCcccchHHHHHHHHh
Confidence 35888877664420 000 244556666666666777888899 77766543211112334455555655
No 489
>PF02638 DUF187: Glycosyl hydrolase like GH101; InterPro: IPR003790 This entry describes proteins of unknown function.
Probab=28.60 E-value=1.3e+02 Score=29.92 Aligned_cols=19 Identities=37% Similarity=0.564 Sum_probs=18.1
Q ss_pred ccChhHHHHHHHHhCCEEE
Q 048643 265 VDPLKPLCDVAKQFGIWVH 283 (506)
Q Consensus 265 idpl~~I~~ia~~~g~~lh 283 (506)
+|||+.+.+.||++|+-+|
T Consensus 69 ~DpL~~~I~eaHkrGlevH 87 (311)
T PF02638_consen 69 FDPLEFMIEEAHKRGLEVH 87 (311)
T ss_pred ccHHHHHHHHHHHcCCEEE
Confidence 7999999999999999888
No 490
>PRK06139 short chain dehydrogenase; Provisional
Probab=28.32 E-value=5.6e+02 Score=25.45 Aligned_cols=46 Identities=11% Similarity=0.068 Sum_probs=29.5
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC
Q 048643 217 NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP 267 (506)
Q Consensus 217 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp 267 (506)
++..+++|- -|.+++++.+++..+....+-++|-++|....+.+.+
T Consensus 57 ~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~ 102 (330)
T PRK06139 57 EVLVVPTDV-----TDADQVKALATQAASFGGRIDVWVNNVGVGAVGRFEE 102 (330)
T ss_pred cEEEEEeeC-----CCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCCccc
Confidence 677777763 3677888777665443223456777788766666543
No 491
>PRK05650 short chain dehydrogenase; Provisional
Probab=27.97 E-value=4.5e+02 Score=24.86 Aligned_cols=46 Identities=7% Similarity=-0.205 Sum_probs=28.1
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC
Q 048643 217 NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP 267 (506)
Q Consensus 217 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp 267 (506)
++..+.+|- .|.+.+++.++........+-.|+.++|....|.+++
T Consensus 50 ~~~~~~~D~-----~~~~~~~~~~~~i~~~~~~id~lI~~ag~~~~~~~~~ 95 (270)
T PRK05650 50 DGFYQRCDV-----RDYSQLTALAQACEEKWGGIDVIVNNAGVASGGFFEE 95 (270)
T ss_pred ceEEEEccC-----CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCccc
Confidence 677777763 3667777766654333233456777777666665543
No 492
>PRK08263 short chain dehydrogenase; Provisional
Probab=26.98 E-value=5.5e+02 Score=24.34 Aligned_cols=45 Identities=7% Similarity=0.016 Sum_probs=27.3
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCccc
Q 048643 217 NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVD 266 (506)
Q Consensus 217 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~id 266 (506)
++..+.+| --|.+.+++.++...+.-..+-.|+-++|....+.+.
T Consensus 50 ~~~~~~~D-----~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~ 94 (275)
T PRK08263 50 RLLPLALD-----VTDRAAVFAAVETAVEHFGRLDIVVNNAGYGLFGMIE 94 (275)
T ss_pred CeeEEEcc-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCccccccc
Confidence 56777766 3467777777765443322345677777766555543
No 493
>PF06620 DUF1150: Protein of unknown function (DUF1150); InterPro: IPR009531 This entry consists of several hypothetical bacterial proteins of unknown function.
Probab=26.97 E-value=1.9e+02 Score=22.13 Aligned_cols=63 Identities=14% Similarity=0.220 Sum_probs=45.7
Q ss_pred hCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCE
Q 048643 211 VGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIW 281 (506)
Q Consensus 211 ~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~ 281 (506)
..+|..++.+|. .++.++|.+.+......| ...+-+..+-.+....+|+-+.....+++|++-
T Consensus 9 a~lg~~~iaYVR-------~v~~~dl~~~~~~~~~~~-~~l~Avh~AdG~~lal~~dR~~Af~~A~q~dl~ 71 (76)
T PF06620_consen 9 AALGEGRIAYVR-------PVRVDDLPEEFPPQIDPG-ETLYAVHAADGTPLALVDDRDAAFAAARQHDLE 71 (76)
T ss_pred HhcCCCcEEEEE-------EechHHhhhhcccccCCC-ceEEEEecCCCCEEEEECCHHHHHHHHHHcCCe
Confidence 345556899997 677888888887544333 445556666667788889999999999999864
No 494
>PRK08329 threonine synthase; Validated
Probab=26.38 E-value=6.2e+02 Score=25.44 Aligned_cols=53 Identities=15% Similarity=0.106 Sum_probs=34.7
Q ss_pred cEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEec
Q 048643 158 GGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKT 223 (506)
Q Consensus 158 ~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~ 223 (506)
..+..++|..+.-.|..+++.- -+..|+++..+-..-....+.+|. +|+.++-
T Consensus 106 ~vv~aSsGN~g~alA~~aa~~G----------~~~~v~vp~~~~~~k~~~~~~~GA---~v~~v~~ 158 (347)
T PRK08329 106 EVVIDSSGNAALSLALYSLSEG----------IKVHVFVSYNASKEKISLLSRLGA---ELHFVEG 158 (347)
T ss_pred EEEEECCCcHHHHHHHHHHHcC----------CcEEEEECCCChHHHHHHHHHcCC---EEEEECC
Confidence 4566666666665565555431 356788887665555566778888 8988873
No 495
>PF01645 Glu_synthase: Conserved region in glutamate synthase; InterPro: IPR002932 Ferredoxin-dependent glutamate synthases have been implicated in a number of functions including photorespiration in Arabidopsis where they may also play a role in primary nitrogen assimilation in roots []. This region is expressed as a seperate subunit in the glutamate synthase alpha subunit from archaebacteria, or part of a large multidomain enzyme in other organisms. The aligned region of these proteins contains a putative FMN binding site and Fe-S cluster.; GO: 0015930 glutamate synthase activity, 0016638 oxidoreductase activity, acting on the CH-NH2 group of donors, 0006537 glutamate biosynthetic process, 0055114 oxidation-reduction process; PDB: 1EA0_A 2VDC_E 1OFE_A 1LLW_A 1OFD_A 1LLZ_A 1LM1_A.
Probab=26.35 E-value=4.3e+02 Score=26.96 Aligned_cols=79 Identities=18% Similarity=0.121 Sum_probs=42.4
Q ss_pred HHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcC-CccEEEEEeccCCCCCcccChhHHHHHHHHhCC-E
Q 048643 204 LQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAG-LVPLFLCATIGTTAITAVDPLKPLCDVAKQFGI-W 281 (506)
Q Consensus 204 ~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g-~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~-~ 281 (506)
-.+.+++.++....-...|.... .--++++|.+.|.+-++.+ ..|+.|=..++ ++++.++..+-+.++ .
T Consensus 160 ~~~ia~~R~~~~g~~~iSP~~h~--di~s~edl~~~I~~Lr~~~~~~pVgvKl~~~-------~~~~~~~~~~~~ag~D~ 230 (368)
T PF01645_consen 160 TEEIARIRGVPPGVDLISPPPHH--DIYSIEDLAQLIEELRELNPGKPVGVKLVAG-------RGVEDIAAGAAKAGADF 230 (368)
T ss_dssp -HHHHHHHTS-TT--EE--SS-T--T-SSHHHHHHHHHHHHHH-TTSEEEEEEE-S-------TTHHHHHHHHHHTT-SE
T ss_pred hHHHHHHhCCCCCCccccCCCCC--CcCCHHHHHHHHHHHHhhCCCCcEEEEECCC-------CcHHHHHHhhhhccCCE
Confidence 35566666664333333343322 2678999999998876654 67776555443 456667765666665 7
Q ss_pred EEeecccccc
Q 048643 282 VHVDAAYAGS 291 (506)
Q Consensus 282 lhVDaA~gg~ 291 (506)
+++||+-||.
T Consensus 231 ItIDG~~GGT 240 (368)
T PF01645_consen 231 ITIDGAEGGT 240 (368)
T ss_dssp EEEE-TT---
T ss_pred EEEeCCCCCC
Confidence 7899998875
No 496
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase. Members of this family are the trehalose biosynthetic enzyme malto-oligosyltrehalose trehalohydrolase, formally known as 4-alpha-D-{(1-4)-alpha-D-glucano}trehalose trehalohydrolase (EC 3.2.1.141). It is the TreZ protein of the TreYZ pathway for trehalose biosynthesis, and alternative to the OtsAB system.
Probab=26.33 E-value=48 Score=35.83 Aligned_cols=33 Identities=33% Similarity=0.427 Sum_probs=26.7
Q ss_pred ccCCCCCcccChhHHHHHHHHhCCEEEeecccc
Q 048643 257 IGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYA 289 (506)
Q Consensus 257 ~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~g 289 (506)
+.....|..++++++++.||++|+-+++|.++.
T Consensus 151 ~~~~~~G~~~e~k~lV~~aH~~Gi~VilD~V~N 183 (542)
T TIGR02402 151 APHNAYGGPDDLKALVDAAHGLGLGVILDVVYN 183 (542)
T ss_pred ccccccCCHHHHHHHHHHHHHCCCEEEEEEccC
Confidence 345667888889999999999999999887653
No 497
>KOG2741 consensus Dimeric dihydrodiol dehydrogenase [Carbohydrate transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=26.21 E-value=4e+02 Score=26.85 Aligned_cols=15 Identities=20% Similarity=0.324 Sum_probs=7.6
Q ss_pred ccChhHHHHHHHHhC
Q 048643 265 VDPLKPLCDVAKQFG 279 (506)
Q Consensus 265 idpl~~I~~ia~~~g 279 (506)
++..++|.+.|++.|
T Consensus 109 ~~e~~~iveaA~~rg 123 (351)
T KOG2741|consen 109 VAEAEEIVEAAEARG 123 (351)
T ss_pred HHHHHHHHHHHHHcC
Confidence 344555555555555
No 498
>COG1606 ATP-utilizing enzymes of the PP-loop superfamily [General function prediction only]
Probab=25.26 E-value=1.1e+02 Score=29.41 Aligned_cols=98 Identities=18% Similarity=0.140 Sum_probs=53.1
Q ss_pred cEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEE--eCCCCch-HHH---HHHHHhCCCCCCeEEEecCCCCCccc
Q 048643 158 GGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVY--GSDQTHC-ALQ---KAAQIVGIDLKNFRAIKTTKSSSYGL 231 (506)
Q Consensus 158 ~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~--~s~~~H~-s~~---ka~~~~G~g~~~v~~v~~~~~~~~~~ 231 (506)
-.+..|||..+.+.|..+.-.. | .+.+.+ .|...-. ++. ..|+..|+ +-..++++ +|
T Consensus 20 v~vAfSGGvDSslLa~la~~~l-----G----~~v~AvTv~sP~~p~~e~e~A~~~A~~iGi---~H~~i~~~-----~~ 82 (269)
T COG1606 20 VVVAFSGGVDSSLLAKLAKEAL-----G----DNVVAVTVDSPYIPRREIEEAKNIAKEIGI---RHEFIKMN-----RM 82 (269)
T ss_pred EEEEecCCccHHHHHHHHHHHh-----c----cceEEEEEecCCCChhhhhHHHHHHHHhCC---cceeeehh-----hc
Confidence 3566778888877665543321 1 122211 2211111 222 34566788 77888875 55
Q ss_pred CHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecccc
Q 048643 232 SPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYA 289 (506)
Q Consensus 232 d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~g 289 (506)
+++- . . +...+++ .+.-+=.+.|.+.++++|.-+++||+-+
T Consensus 83 ~~~~-~----~---n~~~rCY---------~CK~~v~~~l~~~a~~~Gyd~V~dGtNa 123 (269)
T COG1606 83 DPEF-K----E---NPENRCY---------LCKRAVYSTLVEEAEKRGYDVVADGTNA 123 (269)
T ss_pred chhh-c----c---CCCCcch---------HHHHHHHHHHHHHHHHcCCCEEEeCCcH
Confidence 5321 1 1 1111111 2333446788999999999999999753
No 499
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=24.99 E-value=7.5e+02 Score=25.21 Aligned_cols=85 Identities=14% Similarity=0.159 Sum_probs=49.0
Q ss_pred EEEeCCCCchHHHH---HHHHhCCC--CCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCcc---EEEEEeccCCCCCc
Q 048643 193 VVYGSDQTHCALQK---AAQIVGID--LKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVP---LFLCATIGTTAITA 264 (506)
Q Consensus 193 ~v~~s~~~H~s~~k---a~~~~G~g--~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p---~~Vv~t~gtt~tG~ 264 (506)
+++.-+..|.--.. .++++|-| .+..+.-..++++ .=-.-.++++|++ +|..| -+|.+-+-+|+.|.
T Consensus 261 vlvlEelEHA~~RgA~I~AE~lGygls~Da~HiT~P~~dG--~Ga~~am~raL~~---Agl~pe~i~YvNAHATST~~GD 335 (440)
T KOG1394|consen 261 VLVLEELEHAKKRGAPIYAEVLGYGLSSDAYHITSPDPDG--AGAVLAMERALKD---AGLSPEDIDYVNAHATSTPLGD 335 (440)
T ss_pred EEehHhHHHHHHcCCceeHHhhcCcccccccccCCCCCCc--chHHHHHHHHHHH---cCCChhhcCeeecccccCcCch
Confidence 44455555643222 24555544 3444433333333 3334466667665 34333 47888888999998
Q ss_pred ccChhHHHHHHHHhCCEE
Q 048643 265 VDPLKPLCDVAKQFGIWV 282 (506)
Q Consensus 265 idpl~~I~~ia~~~g~~l 282 (506)
.-...+|..+-.++..-.
T Consensus 336 ~aE~~Ai~~vf~~~~~~~ 353 (440)
T KOG1394|consen 336 AAEAEAIKRVFGEHNIAS 353 (440)
T ss_pred HHHHHHHHHHhccCCccc
Confidence 888888888777776543
No 500
>PRK06114 short chain dehydrogenase; Provisional
Probab=24.94 E-value=5.7e+02 Score=23.83 Aligned_cols=42 Identities=10% Similarity=-0.063 Sum_probs=25.5
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCC
Q 048643 217 NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAIT 263 (506)
Q Consensus 217 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG 263 (506)
++..+++| --|.+.+++.+++..+.....-.|+.++|....+
T Consensus 59 ~~~~~~~D-----~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~ 100 (254)
T PRK06114 59 RAIQIAAD-----VTSKADLRAAVARTEAELGALTLAVNAAGIANAN 100 (254)
T ss_pred ceEEEEcC-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence 67777776 3467788887776544333344677777654333
Done!